Query 008707
Match_columns 557
No_of_seqs 431 out of 4222
Neff 9.3
Searched_HMMs 29240
Date Mon Mar 25 09:51:37 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/008707.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/008707hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4aoj_A High affinity nerve gro 100.0 3.8E-54 1.3E-58 432.7 16.3 258 237-513 43-320 (329)
2 4asz_A BDNF/NT-3 growth factor 100.0 1.4E-54 4.7E-59 430.0 12.1 259 236-513 14-290 (299)
3 4gt4_A Tyrosine-protein kinase 100.0 2.7E-54 9.2E-59 429.7 12.4 261 232-511 23-305 (308)
4 3omv_A RAF proto-oncogene seri 100.0 3.1E-53 1.1E-57 420.4 17.4 258 237-513 38-301 (307)
5 4g3f_A NF-kappa-beta-inducing 100.0 4.4E-52 1.5E-56 416.1 17.8 264 237-525 60-329 (336)
6 4b9d_A Serine/threonine-protei 100.0 4.9E-52 1.7E-56 417.6 17.7 249 236-505 25-276 (350)
7 4fih_A Serine/threonine-protei 100.0 7.5E-52 2.6E-56 415.6 18.7 247 237-505 76-323 (346)
8 3fpq_A Serine/threonine-protei 100.0 5.3E-51 1.8E-55 401.5 20.4 244 238-505 29-282 (290)
9 4aw0_A HPDK1, 3-phosphoinositi 100.0 7.4E-52 2.5E-56 409.6 11.7 246 236-504 33-283 (311)
10 4fie_A Serine/threonine-protei 100.0 1.1E-50 3.7E-55 417.1 20.5 247 237-505 153-400 (423)
11 4ase_A Vascular endothelial gr 100.0 1.4E-51 4.9E-56 417.3 13.7 266 232-515 61-350 (353)
12 3hmm_A TGF-beta receptor type- 100.0 2E-51 6.9E-56 409.7 13.6 266 238-514 6-299 (303)
13 3hyh_A Carbon catabolite-derep 100.0 1.3E-50 4.6E-55 395.2 16.1 244 236-505 14-262 (275)
14 3ubd_A Ribosomal protein S6 ki 100.0 7.2E-51 2.5E-55 402.5 8.4 241 236-500 25-271 (304)
15 4g31_A Eukaryotic translation 100.0 8.6E-49 2.9E-53 389.0 18.3 248 237-505 7-279 (299)
16 2qkw_B Protein kinase; three-h 100.0 8E-46 2.7E-50 373.6 24.0 276 237-515 41-318 (321)
17 4b99_A Mitogen-activated prote 100.0 1.8E-46 6.3E-51 386.3 17.5 260 236-506 55-345 (398)
18 3uim_A Brassinosteroid insensi 100.0 1.1E-45 3.9E-50 373.2 16.5 287 227-513 20-312 (326)
19 4f9c_A Cell division cycle 7-r 100.0 2.8E-45 9.7E-50 373.5 18.8 195 236-441 22-250 (361)
20 3uto_A Twitchin; kinase, muscl 100.0 4E-45 1.4E-49 394.4 17.5 250 236-505 158-410 (573)
21 3v5w_A G-protein coupled recep 100.0 8.7E-45 3E-49 389.6 17.2 246 237-505 191-449 (689)
22 3s95_A LIMK-1, LIM domain kina 100.0 3.9E-44 1.3E-48 359.5 16.9 260 235-516 10-286 (310)
23 3p86_A Serine/threonine-protei 100.0 1.2E-43 4E-48 355.8 17.4 261 235-515 37-301 (309)
24 2psq_A Fibroblast growth facto 100.0 3.2E-43 1.1E-47 361.6 20.1 263 235-516 81-368 (370)
25 3fxz_A Serine/threonine-protei 100.0 8.3E-43 2.8E-47 347.7 20.6 248 236-505 21-269 (297)
26 3soc_A Activin receptor type-2 100.0 2.5E-43 8.6E-48 355.6 16.7 266 236-514 25-320 (322)
27 2nru_A Interleukin-1 receptor- 100.0 3.2E-42 1.1E-46 344.8 24.0 279 226-512 14-306 (307)
28 3kul_A Ephrin type-A receptor 100.0 1.6E-43 5.5E-48 357.4 14.5 263 232-515 46-316 (325)
29 3sxs_A Cytoplasmic tyrosine-pr 100.0 1.1E-43 3.8E-48 348.3 12.9 258 235-514 8-266 (268)
30 4hcu_A Tyrosine-protein kinase 100.0 2.5E-43 8.5E-48 346.1 15.1 256 236-513 11-267 (269)
31 3zgw_A Maternal embryonic leuc 100.0 3E-43 1E-47 357.7 14.3 248 236-506 11-261 (347)
32 3gen_A Tyrosine-protein kinase 100.0 6.1E-43 2.1E-47 345.9 15.7 259 234-514 23-282 (283)
33 4eqm_A Protein kinase; transfe 100.0 1E-42 3.5E-47 346.4 17.3 265 236-518 12-281 (294)
34 3fe3_A MAP/microtubule affinit 100.0 7.1E-43 2.4E-47 352.7 16.2 245 237-506 17-265 (328)
35 2c30_A Serine/threonine-protei 100.0 8.3E-42 2.8E-46 344.2 23.4 245 239-505 49-294 (321)
36 3ugc_A Tyrosine-protein kinase 100.0 4.1E-44 1.4E-48 356.6 6.1 266 234-513 9-292 (295)
37 3tt0_A Basic fibroblast growth 100.0 1.1E-42 3.7E-47 359.4 16.1 271 233-522 67-362 (382)
38 4euu_A Serine/threonine-protei 100.0 1.5E-41 5E-46 342.2 23.3 271 237-514 11-311 (319)
39 3cbl_A C-FES, proto-oncogene t 100.0 4.6E-43 1.6E-47 361.4 12.3 258 235-513 114-375 (377)
40 3q4u_A Activin receptor type-1 100.0 5.6E-42 1.9E-46 341.9 19.4 259 236-510 9-300 (301)
41 1qcf_A Haematopoetic cell kina 100.0 4E-43 1.4E-47 370.7 10.6 258 234-513 187-445 (454)
42 1csn_A Casein kinase-1; phosph 100.0 1.8E-41 6.3E-46 337.7 22.0 263 236-515 11-286 (298)
43 2izr_A Casein kinase I isoform 100.0 1.6E-41 5.4E-46 343.6 21.8 260 237-514 11-283 (330)
44 2qol_A Ephrin receptor; recept 100.0 2E-42 6.7E-47 355.9 15.2 260 234-514 44-311 (373)
45 1opk_A P150, C-ABL, proto-onco 100.0 1E-42 3.4E-47 371.3 13.0 258 234-512 219-478 (495)
46 1o6l_A RAC-beta serine/threoni 100.0 5.6E-42 1.9E-46 347.2 17.6 246 237-506 7-261 (337)
47 1mp8_A Focal adhesion kinase 1 100.0 3.2E-42 1.1E-46 340.5 15.1 259 235-515 15-279 (281)
48 3niz_A Rhodanese family protei 100.0 6.1E-42 2.1E-46 343.7 17.0 259 237-505 23-300 (311)
49 2yab_A Death-associated protei 100.0 1.9E-41 6.6E-46 346.5 20.9 249 236-505 13-272 (361)
50 2bdw_A Hypothetical protein K1 100.0 1.2E-41 4.1E-46 348.7 19.0 255 231-506 25-285 (362)
51 1k9a_A Carboxyl-terminal SRC k 100.0 9.8E-42 3.4E-46 359.6 18.9 252 236-514 194-447 (450)
52 3t9t_A Tyrosine-protein kinase 100.0 3.6E-42 1.2E-46 337.2 14.3 255 236-512 9-264 (267)
53 3lb7_A RAF proto-oncogene seri 100.0 8.6E-42 3E-46 341.9 17.2 264 232-514 33-302 (307)
54 2ivs_A Proto-oncogene tyrosine 100.0 3.5E-42 1.2E-46 345.5 14.3 260 235-513 23-312 (314)
55 3kfa_A Tyrosine-protein kinase 100.0 2.6E-42 9E-47 342.1 13.2 261 233-514 11-273 (288)
56 3l9p_A Anaplastic lymphoma kin 100.0 1.3E-42 4.6E-47 356.6 10.9 265 232-515 68-348 (367)
57 1qpc_A LCK kinase; alpha beta 100.0 3.1E-42 1E-46 340.1 13.1 259 235-515 13-272 (279)
58 1fmk_A C-SRC, P60-SRC, tyrosin 100.0 1.3E-42 4.4E-47 366.5 10.9 259 235-515 184-443 (452)
59 2y0a_A Death-associated protei 100.0 1.3E-41 4.5E-46 343.5 17.8 251 234-505 10-271 (326)
60 3soa_A Calcium/calmodulin-depe 100.0 3.1E-41 1.1E-45 353.9 20.7 253 234-506 10-268 (444)
61 4e5w_A Tyrosine-protein kinase 100.0 1.2E-41 4.2E-46 339.7 16.8 264 234-511 20-301 (302)
62 3kn6_A Ribosomal protein S6 ki 100.0 1.1E-41 3.8E-46 343.9 16.3 249 241-505 17-270 (325)
63 3c0i_A Peripheral plasma membr 100.0 1E-41 3.4E-46 348.0 16.2 255 233-505 22-286 (351)
64 2eva_A TAK1 kinase - TAB1 chim 100.0 1.4E-41 4.9E-46 340.3 17.0 262 236-520 9-271 (307)
65 1luf_A Muscle-specific tyrosin 100.0 6E-42 2.1E-46 348.3 14.3 262 235-515 47-338 (343)
66 3tki_A Serine/threonine-protei 100.0 1.2E-41 4E-46 343.4 16.3 250 237-506 9-262 (323)
67 1tki_A Titin; serine kinase, m 100.0 9.2E-42 3.2E-46 343.8 15.1 249 237-506 7-258 (321)
68 3qup_A Tyrosine-protein kinase 100.0 7.4E-42 2.5E-46 344.8 14.3 263 234-515 22-301 (323)
69 3vhe_A Vascular endothelial gr 100.0 8.3E-42 2.8E-46 349.6 14.8 262 235-514 22-357 (359)
70 3qd2_B Eukaryotic translation 100.0 3.3E-41 1.1E-45 341.0 18.9 250 235-505 6-325 (332)
71 3lxp_A Non-receptor tyrosine-p 100.0 4.3E-42 1.5E-46 345.9 12.1 262 238-515 34-313 (318)
72 1ob3_A PFPK5, cell division co 100.0 2.8E-41 9.4E-46 335.1 17.7 259 237-505 4-280 (288)
73 2pvf_A Fibroblast growth facto 100.0 1.1E-41 3.8E-46 345.3 14.9 265 234-517 34-323 (334)
74 4dc2_A Protein kinase C IOTA t 100.0 2.2E-41 7.4E-46 349.4 17.3 248 236-500 53-307 (396)
75 4f0f_A Serine/threonine-protei 100.0 4.1E-41 1.4E-45 333.4 18.4 252 235-510 19-287 (287)
76 2zv2_A Calcium/calmodulin-depe 100.0 6.9E-41 2.3E-45 333.9 20.0 246 237-505 15-292 (298)
77 3op5_A Serine/threonine-protei 100.0 5.2E-41 1.8E-45 344.6 19.7 268 236-515 36-332 (364)
78 1kob_A Twitchin; kinase, intra 100.0 3.5E-41 1.2E-45 347.6 18.3 250 236-505 52-304 (387)
79 1t46_A HOMO sapiens V-KIT hard 100.0 7.2E-42 2.5E-46 343.1 12.8 262 235-514 23-309 (313)
80 3mdy_A Bone morphogenetic prot 100.0 1.5E-40 5.1E-45 337.1 22.6 268 231-514 33-333 (337)
81 4fvq_A Tyrosine-protein kinase 100.0 7.4E-42 2.5E-46 339.1 12.5 254 235-516 8-279 (289)
82 1rjb_A FL cytokine receptor; k 100.0 8.7E-42 3E-46 347.4 13.2 266 233-516 43-338 (344)
83 3txo_A PKC-L, NPKC-ETA, protei 100.0 5.9E-42 2E-46 349.3 11.9 247 235-505 23-280 (353)
84 3cc6_A Protein tyrosine kinase 100.0 2E-41 7E-46 334.6 15.3 258 236-515 13-276 (281)
85 3dtc_A Mitogen-activated prote 100.0 4.2E-41 1.4E-45 330.4 17.4 249 236-510 8-271 (271)
86 4fr4_A YANK1, serine/threonine 100.0 5E-41 1.7E-45 345.5 18.5 248 236-505 16-271 (384)
87 3gni_B Strad alpha; kinase fol 100.0 7.3E-41 2.5E-45 346.6 19.7 270 236-511 26-341 (389)
88 3poz_A Epidermal growth factor 100.0 1.9E-41 6.4E-46 342.6 14.9 257 235-513 15-279 (327)
89 3h4j_B AMPK kdaid, SNF1-like p 100.0 9.4E-42 3.2E-46 345.3 12.7 244 237-506 11-259 (336)
90 1u59_A Tyrosine-protein kinase 100.0 9.3E-41 3.2E-45 331.0 19.5 255 241-517 16-277 (287)
91 1fot_A TPK1 delta, CAMP-depend 100.0 4.3E-41 1.5E-45 338.2 17.2 242 237-505 8-258 (318)
92 3kmu_A ILK, integrin-linked ki 100.0 6E-41 2.1E-45 328.9 17.7 251 236-512 11-270 (271)
93 3o0g_A Cell division protein k 100.0 3.6E-41 1.2E-45 334.9 16.2 260 237-505 4-282 (292)
94 2x4f_A Myosin light chain kina 100.0 4.8E-41 1.7E-45 345.4 17.5 251 240-510 94-349 (373)
95 3a8x_A Protein kinase C IOTA t 100.0 5.9E-41 2E-45 341.1 18.0 247 237-500 11-264 (345)
96 1b6c_B TGF-B superfamily recep 100.0 1.5E-40 5.2E-45 337.8 20.6 268 230-514 37-338 (342)
97 4hgt_A Casein kinase I isoform 100.0 1.9E-40 6.6E-45 329.8 20.9 264 235-515 9-283 (296)
98 3lxl_A Tyrosine-protein kinase 100.0 3.9E-42 1.3E-46 347.6 8.7 267 235-515 23-306 (327)
99 1xjd_A Protein kinase C, theta 100.0 1.3E-41 4.5E-46 345.5 12.4 245 236-504 18-268 (345)
100 4aw2_A Serine/threonine-protei 100.0 3.3E-41 1.1E-45 352.6 15.5 253 237-506 76-339 (437)
101 3a62_A Ribosomal protein S6 ki 100.0 3.8E-41 1.3E-45 340.3 15.5 247 235-505 17-276 (327)
102 2h34_A Serine/threonine-protei 100.0 1.7E-40 5.9E-45 332.8 20.1 260 236-515 35-299 (309)
103 3og7_A AKAP9-BRAF fusion prote 100.0 1.8E-41 6.1E-46 336.6 12.8 263 231-512 20-288 (289)
104 2a19_B Interferon-induced, dou 100.0 1E-40 3.5E-45 329.7 18.3 256 231-517 7-279 (284)
105 3v8s_A RHO-associated protein 100.0 2.1E-41 7.2E-46 351.3 13.6 250 237-506 71-330 (410)
106 2wqm_A Serine/threonine-protei 100.0 2.3E-40 7.8E-45 331.9 20.6 264 236-516 33-301 (310)
107 4eut_A Serine/threonine-protei 100.0 1E-40 3.4E-45 346.3 18.6 271 237-514 11-311 (396)
108 3p1a_A MYT1 kinase, membrane-a 100.0 6.4E-41 2.2E-45 336.3 16.2 250 229-505 51-304 (311)
109 3uzp_A CKI-delta, CKID, casein 100.0 6.1E-40 2.1E-44 326.3 23.1 263 237-516 11-284 (296)
110 2pmi_A Negative RE, cyclin-dep 100.0 1.8E-40 6.3E-45 333.8 19.4 262 236-505 6-293 (317)
111 2h8h_A Proto-oncogene tyrosine 100.0 5.4E-42 1.9E-46 369.0 8.8 258 234-513 266-524 (535)
112 3f3z_A Calcium/calmodulin-depe 100.0 1.7E-40 5.8E-45 327.3 18.7 249 235-505 9-261 (277)
113 3ll6_A Cyclin G-associated kin 100.0 5.6E-41 1.9E-45 339.9 15.6 258 235-515 28-311 (337)
114 2buj_A Serine/threonine-protei 100.0 6.4E-41 2.2E-45 337.0 15.8 263 235-514 29-308 (317)
115 3kex_A Receptor tyrosine-prote 100.0 5.3E-41 1.8E-45 339.0 15.3 256 236-513 14-277 (325)
116 3f66_A Hepatocyte growth facto 100.0 1.1E-40 3.8E-45 332.2 17.4 259 237-516 27-295 (298)
117 3lzb_A Epidermal growth factor 100.0 4.9E-41 1.7E-45 339.5 14.8 257 235-513 15-279 (327)
118 3c1x_A Hepatocyte growth facto 100.0 5.8E-41 2E-45 344.8 15.2 260 237-517 91-360 (373)
119 2v62_A Serine/threonine-protei 100.0 1.2E-40 4.1E-45 339.3 17.3 265 235-512 37-328 (345)
120 3pls_A Macrophage-stimulating 100.0 2.1E-40 7.1E-45 330.0 18.7 259 239-517 25-292 (298)
121 1rdq_E PKA C-alpha, CAMP-depen 100.0 7.5E-41 2.6E-45 340.9 15.8 242 237-505 43-293 (350)
122 4agu_A Cyclin-dependent kinase 100.0 6.1E-41 2.1E-45 336.2 14.9 262 237-505 5-284 (311)
123 3uc3_A Serine/threonine-protei 100.0 1E-40 3.5E-45 341.7 16.6 251 236-506 21-275 (361)
124 2vd5_A DMPK protein; serine/th 100.0 5.3E-41 1.8E-45 348.5 14.7 252 237-506 63-328 (412)
125 3g33_A Cell division protein k 100.0 6.1E-41 2.1E-45 335.9 14.5 266 230-505 4-296 (308)
126 1mqb_A Ephrin type-A receptor 100.0 1.6E-40 5.4E-45 336.7 17.6 260 235-515 44-312 (333)
127 2a2a_A Death-associated protei 100.0 4.7E-40 1.6E-44 331.5 20.7 251 234-505 11-272 (321)
128 3brb_A Proto-oncogene tyrosine 100.0 8.4E-41 2.9E-45 335.6 15.2 262 234-514 33-310 (313)
129 2i0e_A Protein kinase C-beta I 100.0 7.1E-41 2.4E-45 341.2 14.8 246 236-505 21-276 (353)
130 2y94_A 5'-AMP-activated protei 100.0 1.6E-40 5.6E-45 350.8 18.0 244 237-505 18-266 (476)
131 3g2f_A Bone morphogenetic prot 100.0 1.1E-40 3.9E-45 338.0 16.1 275 236-523 14-329 (336)
132 3hko_A Calcium/calmodulin-depe 100.0 3.2E-40 1.1E-44 335.9 19.5 256 234-505 25-330 (345)
133 1p4o_A Insulin-like growth fac 100.0 3.3E-41 1.1E-45 339.9 11.8 261 234-513 24-300 (322)
134 2eue_A Carbon catabolite derep 100.0 9.5E-41 3.3E-45 328.8 14.8 243 237-505 15-262 (275)
135 2w1i_A JAK2; chromosomal rearr 100.0 2.2E-40 7.5E-45 334.6 17.9 265 235-513 41-323 (326)
136 3dbq_A Dual specificity protei 100.0 2.5E-40 8.5E-45 336.7 18.3 248 237-506 11-274 (343)
137 2w4o_A Calcium/calmodulin-depe 100.0 1.4E-40 4.6E-45 339.3 16.3 248 236-505 54-305 (349)
138 2xir_A Vascular endothelial gr 100.0 1.3E-40 4.5E-45 334.4 15.9 263 235-515 27-313 (316)
139 3llt_A Serine/threonine kinase 100.0 2.1E-40 7.2E-45 339.4 17.6 262 231-505 31-355 (360)
140 2ozo_A Tyrosine-protein kinase 100.0 2.7E-40 9.1E-45 360.9 19.3 252 242-515 343-601 (613)
141 3cok_A Serine/threonine-protei 100.0 1.3E-40 4.3E-45 328.4 15.1 246 237-505 13-262 (278)
142 3fdn_A Serine/threonine-protei 100.0 1.3E-40 4.5E-45 328.5 15.3 244 237-506 11-258 (279)
143 3ork_A Serine/threonine protei 100.0 1.3E-40 4.4E-45 334.0 15.5 260 236-514 13-283 (311)
144 2yex_A Serine/threonine-protei 100.0 6.2E-40 2.1E-44 322.9 19.5 251 235-505 7-261 (276)
145 2jii_A Serine/threonine-protei 100.0 2.7E-40 9.1E-45 337.7 17.4 264 236-515 43-339 (352)
146 1xbb_A Tyrosine-protein kinase 100.0 1.3E-40 4.4E-45 330.7 14.6 257 237-516 18-283 (291)
147 3is5_A Calcium-dependent prote 100.0 6.5E-40 2.2E-44 324.7 19.5 251 235-505 22-278 (285)
148 2qr7_A Ribosomal protein S6 ki 100.0 1.8E-40 6.2E-45 337.1 15.8 252 234-506 21-278 (342)
149 3gxj_A TGF-beta receptor type- 100.0 2.8E-42 9.4E-47 344.3 2.3 262 236-514 4-299 (303)
150 1byg_A CSK, protein (C-termina 100.0 6.1E-41 2.1E-45 330.7 11.9 253 235-514 21-275 (278)
151 2zmd_A Dual specificity protei 100.0 5.9E-40 2E-44 339.5 19.5 248 237-506 58-321 (390)
152 2jam_A Calcium/calmodulin-depe 100.0 4.6E-40 1.6E-44 328.8 17.8 250 234-505 8-261 (304)
153 1fvr_A Tyrosine-protein kinase 100.0 6.1E-41 2.1E-45 338.8 11.5 261 234-515 24-303 (327)
154 3bhy_A Death-associated protei 100.0 9.3E-40 3.2E-44 322.9 19.8 259 234-513 4-275 (283)
155 2i1m_A Macrophage colony-stimu 100.0 4.7E-41 1.6E-45 340.4 10.3 263 235-515 46-329 (333)
156 3dls_A PAS domain-containing s 100.0 3.4E-40 1.2E-44 334.4 16.6 242 234-506 23-275 (335)
157 1u5q_A Serine/threonine protei 100.0 9.2E-40 3.1E-44 332.8 19.7 246 235-506 54-306 (348)
158 2r5t_A Serine/threonine-protei 100.0 1E-40 3.5E-45 342.4 12.7 249 235-507 38-291 (373)
159 4ejn_A RAC-alpha serine/threon 100.0 6.3E-41 2.2E-45 353.3 11.4 247 236-505 149-404 (446)
160 2rku_A Serine/threonine-protei 100.0 3.8E-40 1.3E-44 327.7 16.3 246 237-506 17-266 (294)
161 2yfx_A Tyrosine-protein kinase 100.0 9.6E-41 3.3E-45 337.4 12.0 265 232-515 27-307 (327)
162 4fl3_A Tyrosine-protein kinase 100.0 2.1E-40 7E-45 362.7 15.6 249 241-512 375-631 (635)
163 2ac3_A MAP kinase-interacting 100.0 6.5E-40 2.2E-44 329.5 17.8 254 240-505 18-295 (316)
164 2clq_A Mitogen-activated prote 100.0 1.3E-39 4.4E-44 323.8 19.4 247 241-505 28-278 (295)
165 3kk8_A Calcium/calmodulin depe 100.0 4.8E-40 1.7E-44 325.1 16.1 248 237-505 8-261 (284)
166 2vgo_A Serine/threonine-protei 100.0 2.7E-40 9.2E-45 327.1 14.0 244 236-505 15-262 (284)
167 3eqc_A Dual specificity mitoge 100.0 2.5E-40 8.5E-45 338.9 14.1 254 235-506 33-325 (360)
168 1vzo_A Ribosomal protein S6 ki 100.0 2E-40 7E-45 338.8 13.4 252 236-506 55-322 (355)
169 2acx_A G protein-coupled recep 100.0 4.8E-40 1.6E-44 352.1 16.6 251 237-506 186-445 (576)
170 2owb_A Serine/threonine-protei 100.0 4.1E-40 1.4E-44 333.9 15.2 246 236-505 42-291 (335)
171 1nxk_A MAP kinase-activated pr 100.0 2.4E-39 8.3E-44 335.9 21.3 245 241-506 68-322 (400)
172 4aaa_A Cyclin-dependent kinase 100.0 2.1E-40 7.3E-45 335.5 12.9 262 236-506 26-307 (331)
173 3ttj_A Mitogen-activated prote 100.0 8.6E-40 3E-44 345.5 18.0 260 236-506 63-356 (464)
174 3oz6_A Mitogen-activated prote 100.0 8.4E-40 2.9E-44 338.5 17.5 262 234-506 8-329 (388)
175 1t4h_A Serine/threonine-protei 100.0 2.6E-39 8.7E-44 321.1 20.2 244 238-505 29-282 (290)
176 3mtl_A Cell division protein k 100.0 8.5E-41 2.9E-45 337.4 9.5 259 237-505 4-281 (324)
177 3gbz_A Kinase, CMGC CDK; ssgci 100.0 2E-40 6.9E-45 335.3 12.3 259 236-505 35-318 (329)
178 3lm5_A Serine/threonine-protei 100.0 7.3E-40 2.5E-44 331.0 16.2 256 231-505 24-287 (327)
179 3a7i_A MST3 kinase, serine/thr 100.0 9.4E-40 3.2E-44 326.4 16.7 246 237-506 24-271 (303)
180 3e7e_A HBUB1, BUB1A, mitotic c 100.0 2.4E-39 8.2E-44 332.3 19.9 253 235-514 65-341 (365)
181 3sv0_A Casein kinase I-like; t 100.0 4.6E-39 1.6E-43 340.3 22.5 261 237-514 9-280 (483)
182 1x8b_A WEE1HU, WEE1-like prote 100.0 7.1E-40 2.4E-44 324.1 14.9 245 234-505 10-279 (289)
183 1u46_A ACK-1, activated CDC42 100.0 9.8E-40 3.3E-44 324.0 15.6 259 235-514 18-286 (291)
184 2w5a_A Serine/threonine-protei 100.0 3.1E-40 1.1E-44 325.6 11.8 251 237-507 8-269 (279)
185 3i6u_A CDS1, serine/threonine- 100.0 8.8E-40 3E-44 341.5 15.7 253 232-505 132-399 (419)
186 3mi9_A Cell division protein k 100.0 1.2E-39 4.2E-44 332.6 16.4 261 236-505 18-311 (351)
187 2h6d_A 5'-AMP-activated protei 100.0 9.1E-40 3.1E-44 321.8 14.8 246 236-506 12-262 (276)
188 3lij_A Calcium/calmodulin depe 100.0 1.2E-39 4.2E-44 347.9 17.0 255 234-510 36-298 (494)
189 1ua2_A CAK, cell division prot 100.0 1.7E-39 6E-44 330.8 17.3 262 235-506 10-292 (346)
190 3c4z_A Rhodopsin kinase; Ser/T 100.0 2.4E-39 8.2E-44 345.9 19.0 249 240-505 190-448 (543)
191 2j7t_A Serine/threonine-protei 100.0 1.1E-39 3.8E-44 325.5 15.3 250 236-505 20-275 (302)
192 3com_A Serine/threonine-protei 100.0 4.7E-39 1.6E-43 322.9 19.9 250 234-505 28-278 (314)
193 3mwu_A Calmodulin-domain prote 100.0 4.3E-39 1.5E-43 343.1 20.7 251 234-506 21-277 (486)
194 2wtk_C Serine/threonine-protei 100.0 3.5E-39 1.2E-43 322.4 18.6 248 237-506 7-264 (305)
195 2y7j_A Phosphorylase B kinase 100.0 3.6E-39 1.2E-43 330.8 19.0 249 236-505 95-359 (365)
196 3rp9_A Mitogen-activated prote 100.0 2.2E-39 7.6E-44 342.8 17.8 191 236-433 54-279 (458)
197 1wak_A Serine/threonine-protei 100.0 2.7E-39 9.3E-44 335.3 17.9 268 228-505 30-391 (397)
198 1cm8_A Phosphorylated MAP kina 100.0 1.1E-39 3.9E-44 334.7 14.8 261 236-512 26-316 (367)
199 3nyv_A Calmodulin-domain prote 100.0 2.8E-39 9.5E-44 344.4 18.3 252 233-506 24-282 (484)
200 3nsz_A CK II alpha, casein kin 100.0 3.4E-39 1.2E-43 326.3 17.7 256 235-505 36-319 (330)
201 3n9x_A Phosphotransferase; mal 100.0 5.9E-39 2E-43 336.7 20.2 197 236-439 27-253 (432)
202 3byv_A Rhoptry kinase; malaria 100.0 9.9E-41 3.4E-45 344.1 6.1 246 237-512 75-368 (377)
203 2vwi_A Serine/threonine-protei 100.0 6.8E-40 2.3E-44 327.0 11.6 256 236-505 16-287 (303)
204 2r3i_A Cell division protein k 100.0 7.3E-39 2.5E-43 319.1 18.7 260 237-505 5-283 (299)
205 3pfq_A PKC-B, PKC-beta, protei 100.0 2.5E-39 8.7E-44 356.5 16.8 246 236-505 342-597 (674)
206 2j0j_A Focal adhesion kinase 1 100.0 2E-39 6.9E-44 356.2 15.7 259 234-514 389-653 (656)
207 2ycf_A Serine/threonine-protei 100.0 3.4E-39 1.2E-43 325.3 15.8 254 231-505 6-274 (322)
208 3fme_A Dual specificity mitoge 100.0 2.2E-39 7.6E-44 321.3 14.1 250 236-505 8-266 (290)
209 4e7w_A Glycogen synthase kinas 100.0 1.5E-39 5.1E-44 337.0 13.2 259 236-506 41-322 (394)
210 3q5i_A Protein kinase; CDPK, m 100.0 1.3E-38 4.3E-43 340.9 20.6 250 235-506 36-302 (504)
211 3kvw_A DYRK2, dual specificity 100.0 8.6E-39 2.9E-43 334.9 18.5 199 235-443 97-304 (429)
212 1z57_A Dual specificity protei 100.0 5.5E-39 1.9E-43 325.4 16.5 259 234-505 13-328 (339)
213 3rgf_A Cyclin-dependent kinase 100.0 7.5E-39 2.5E-43 333.3 17.7 261 240-506 26-334 (405)
214 2xrw_A Mitogen-activated prote 100.0 1.2E-38 4.1E-43 327.8 19.0 260 236-506 26-319 (371)
215 2pml_X PFPK7, Ser/Thr protein 100.0 3.5E-39 1.2E-43 328.7 14.7 257 236-505 32-322 (348)
216 3qyz_A Mitogen-activated prote 100.0 1.9E-38 6.5E-43 325.4 19.9 260 236-506 28-314 (364)
217 3q60_A ROP5B; pseudokinase, tr 100.0 8.4E-40 2.9E-44 336.4 9.8 251 237-505 64-352 (371)
218 3eb0_A Putative uncharacterize 100.0 1.9E-39 6.6E-44 335.2 12.2 263 236-511 8-329 (383)
219 2x7f_A TRAF2 and NCK-interacti 100.0 9.8E-39 3.3E-43 322.3 16.8 248 237-505 26-286 (326)
220 1phk_A Phosphorylase kinase; g 100.0 6.4E-39 2.2E-43 319.4 15.2 248 237-505 19-283 (298)
221 3pg1_A Mitogen-activated prote 100.0 1.6E-39 5.4E-44 333.2 11.0 260 236-506 23-317 (362)
222 3an0_A Dual specificity mitoge 100.0 8.4E-39 2.9E-43 324.9 16.2 250 236-505 52-310 (340)
223 2fst_X Mitogen-activated prote 100.0 4.3E-39 1.5E-43 330.2 14.0 255 236-506 30-312 (367)
224 2y4i_B KSR2, HKSR2, kinase sup 100.0 3.5E-39 1.2E-43 324.5 12.9 256 236-514 34-304 (319)
225 1zy4_A Serine/threonine-protei 100.0 2.8E-38 9.5E-43 315.1 18.8 250 235-505 6-283 (303)
226 1q8y_A SR protein kinase; tran 100.0 4.2E-38 1.4E-42 323.8 19.7 261 235-505 19-333 (373)
227 3cek_A Dual specificity protei 100.0 3.2E-38 1.1E-42 316.8 18.3 250 235-506 28-293 (313)
228 1j1b_A Glycogen synthase kinas 100.0 1.1E-38 3.7E-43 333.3 15.4 257 237-505 56-336 (420)
229 2i6l_A Mitogen-activated prote 100.0 2.1E-38 7.3E-43 318.6 16.8 255 237-505 13-305 (320)
230 2vx3_A Dual specificity tyrosi 100.0 5.3E-38 1.8E-42 324.3 20.0 200 235-442 54-262 (382)
231 2wei_A Calmodulin-domain prote 100.0 5.2E-38 1.8E-42 311.2 18.9 253 231-505 18-276 (287)
232 1blx_A Cyclin-dependent kinase 100.0 2.7E-38 9.4E-43 319.0 16.9 260 236-505 12-296 (326)
233 3e3p_A Protein kinase, putativ 100.0 2E-38 6.7E-43 324.7 15.9 262 235-506 23-315 (360)
234 4exu_A Mitogen-activated prote 100.0 4.8E-38 1.6E-42 323.3 17.9 254 236-506 43-324 (371)
235 2eu9_A Dual specificity protei 100.0 3.6E-38 1.2E-42 321.7 16.6 259 234-505 18-333 (355)
236 2b9h_A MAP kinase FUS3, mitoge 100.0 9.8E-39 3.4E-43 326.0 11.6 258 237-505 13-305 (353)
237 3coi_A Mitogen-activated prote 100.0 3.8E-38 1.3E-42 321.8 15.1 253 237-506 26-306 (353)
238 3aln_A Dual specificity mitoge 100.0 4.8E-38 1.6E-42 317.5 14.7 253 237-506 24-286 (327)
239 2rio_A Serine/threonine-protei 100.0 9.9E-38 3.4E-42 327.4 17.2 247 240-505 20-295 (434)
240 3fhr_A MAP kinase-activated pr 100.0 1.5E-37 5E-42 315.3 17.6 249 237-505 30-287 (336)
241 3qa8_A MGC80376 protein; kinas 100.0 4.6E-38 1.6E-42 340.0 12.8 268 235-512 14-309 (676)
242 2dyl_A Dual specificity mitoge 100.0 3.3E-37 1.1E-41 309.8 17.4 249 237-506 27-284 (318)
243 2iwi_A Serine/threonine-protei 100.0 3.1E-38 1.1E-42 316.7 9.1 243 231-505 27-283 (312)
244 3a99_A Proto-oncogene serine/t 100.0 9.3E-38 3.2E-42 314.5 12.0 239 235-505 43-293 (320)
245 3p23_A Serine/threonine-protei 100.0 3.4E-37 1.2E-41 322.6 15.0 246 237-505 26-283 (432)
246 3uqc_A Probable conserved tran 100.0 4.6E-36 1.6E-40 297.0 17.8 234 235-515 31-268 (286)
247 2pzi_A Probable serine/threoni 100.0 1.8E-36 6.3E-41 335.5 15.9 240 235-512 80-328 (681)
248 2vuw_A Serine/threonine-protei 100.0 2.4E-36 8.4E-41 306.3 10.2 243 232-504 17-329 (336)
249 3m2w_A MAP kinase-activated pr 100.0 5E-35 1.7E-39 291.6 19.0 221 241-506 24-257 (299)
250 3dzo_A Rhoptry kinase domain; 100.0 2.2E-35 7.6E-40 307.5 12.6 237 239-505 82-363 (413)
251 4azs_A Methyltransferase WBDD; 100.0 6.1E-30 2.1E-34 275.9 5.6 186 241-437 240-437 (569)
252 3en9_A Glycoprotease, O-sialog 99.9 3.2E-26 1.1E-30 245.5 6.9 183 240-439 341-539 (540)
253 1zar_A RIO2 kinase; serine kin 99.9 2E-23 6.7E-28 205.5 7.0 140 240-411 95-252 (282)
254 1zth_A RIO1 serine protein kin 99.8 1.9E-19 6.7E-24 174.7 9.9 135 239-388 51-220 (258)
255 1ogq_A PGIP-2, polygalacturona 99.7 2.9E-17 9.8E-22 164.1 9.8 141 4-144 9-161 (313)
256 2wfh_A SLIT homolog 2 protein 99.7 9E-17 3.1E-21 148.6 10.9 122 25-148 9-142 (193)
257 4gyi_A RIO2 kinase; protein ki 99.7 2.6E-16 8.9E-21 158.9 10.8 138 237-388 97-266 (397)
258 3e6j_A Variable lymphocyte rec 99.6 9.6E-16 3.3E-20 145.8 12.1 104 26-130 19-131 (229)
259 1w8a_A SLIT protein; signaling 99.6 6E-16 2.1E-20 143.0 10.2 126 22-148 5-142 (192)
260 2o6r_A Variable lymphocyte rec 99.6 1.9E-15 6.5E-20 137.6 11.8 125 22-148 4-140 (177)
261 4ecn_A Leucine-rich repeat pro 99.6 6.6E-16 2.3E-20 173.3 9.7 139 3-143 271-526 (876)
262 2v9t_B SLIT homolog 2 protein 99.6 6.2E-15 2.1E-19 139.2 10.9 100 22-123 8-117 (220)
263 4eco_A Uncharacterized protein 99.6 4E-15 1.4E-19 163.1 9.3 135 4-143 33-284 (636)
264 3rgz_A Protein brassinosteroid 99.5 5.8E-15 2E-19 165.5 6.5 110 39-148 632-743 (768)
265 3g39_A Variable lymphocyte rec 99.5 2.8E-14 9.5E-19 129.0 9.3 103 42-148 12-118 (170)
266 2o6s_A Variable lymphocyte rec 99.5 5.4E-14 1.8E-18 131.4 11.4 121 22-144 4-136 (208)
267 2v70_A SLIT-2, SLIT homolog 2 99.5 4.7E-14 1.6E-18 133.2 10.1 124 25-148 10-169 (220)
268 3g39_A Variable lymphocyte rec 99.5 1.3E-13 4.6E-18 124.5 10.1 101 25-125 8-117 (170)
269 4fcg_A Uncharacterized protein 99.5 1.1E-14 3.9E-19 146.2 2.7 139 3-144 29-195 (328)
270 2r9u_A Variable lymphocyte rec 99.5 2.1E-13 7.2E-18 123.6 10.3 103 42-148 15-121 (174)
271 2v70_A SLIT-2, SLIT homolog 2 99.4 1.5E-13 5.2E-18 129.6 9.4 105 33-145 9-118 (220)
272 2r9u_A Variable lymphocyte rec 99.4 2.7E-13 9.3E-18 122.9 10.6 104 25-129 11-123 (174)
273 3rgz_A Protein brassinosteroid 99.4 1.1E-13 3.9E-18 155.0 8.6 121 4-129 15-145 (768)
274 1p9a_G Platelet glycoprotein I 99.4 3.7E-13 1.3E-17 132.6 11.0 108 39-148 100-211 (290)
275 2ifg_A High affinity nerve gro 99.4 4.5E-13 1.5E-17 135.6 8.4 102 44-148 13-119 (347)
276 3m19_A Variable lymphocyte rec 99.4 1.5E-12 5E-17 125.5 11.0 117 27-144 15-143 (251)
277 3m19_A Variable lymphocyte rec 99.4 1.6E-12 5.4E-17 125.3 11.1 108 39-147 83-194 (251)
278 2o6q_A Variable lymphocyte rec 99.4 1.2E-12 4E-17 127.6 10.2 127 17-144 6-145 (270)
279 2o6s_A Variable lymphocyte rec 99.4 2.6E-12 9E-17 119.9 11.1 110 38-148 51-164 (208)
280 2xot_A Amphoterin-induced prot 99.4 1.3E-12 4.4E-17 133.0 9.7 121 24-145 16-149 (361)
281 1ogq_A PGIP-2, polygalacturona 99.3 3.2E-13 1.1E-17 134.7 4.6 108 41-148 199-307 (313)
282 4g8a_A TOLL-like receptor 4; l 99.3 1.1E-12 3.8E-17 143.4 9.3 108 36-144 49-160 (635)
283 3oja_A Leucine-rich immune mol 99.3 3.4E-13 1.2E-17 142.9 4.7 29 275-303 323-351 (487)
284 2o6q_A Variable lymphocyte rec 99.3 3.4E-12 1.2E-16 124.3 11.2 109 39-148 109-221 (270)
285 1w8a_A SLIT protein; signaling 99.3 1.3E-12 4.3E-17 120.5 7.6 91 38-128 53-144 (192)
286 2v9t_B SLIT homolog 2 protein 99.3 3.5E-12 1.2E-16 120.2 10.0 110 38-148 55-168 (220)
287 2xot_A Amphoterin-induced prot 99.3 1.6E-12 5.5E-17 132.3 8.0 93 38-131 63-156 (361)
288 4g8a_A TOLL-like receptor 4; l 99.3 2.2E-12 7.4E-17 141.1 9.5 111 38-148 468-583 (635)
289 3rfs_A Internalin B, repeat mo 99.3 6.5E-12 2.2E-16 122.5 11.3 108 39-147 109-220 (272)
290 2ell_A Acidic leucine-rich nuc 99.3 1.9E-12 6.4E-17 116.5 6.3 107 36-144 21-132 (168)
291 2je0_A Acidic leucine-rich nuc 99.3 1.7E-12 5.7E-17 114.3 5.7 106 37-144 15-125 (149)
292 2z81_A CD282 antigen, TOLL-lik 99.3 3.4E-12 1.2E-16 137.3 8.5 118 25-143 3-134 (549)
293 2ifg_A High affinity nerve gro 99.3 6E-12 2E-16 127.3 9.3 99 23-123 5-116 (347)
294 2z80_A TOLL-like receptor 2, v 99.3 5.3E-12 1.8E-16 128.0 8.4 116 25-143 29-160 (353)
295 3tm0_A Aminoglycoside 3'-phosp 99.3 1.2E-11 4.3E-16 119.7 10.4 139 238-385 17-212 (263)
296 3zyj_A Leucine-rich repeat-con 99.3 7.2E-12 2.5E-16 131.0 9.2 108 38-148 184-295 (440)
297 3v47_A TOLL-like receptor 5B a 99.3 7E-12 2.4E-16 131.6 9.1 110 38-148 298-411 (455)
298 2z62_A TOLL-like receptor 4, v 99.3 1.1E-11 3.9E-16 120.9 9.9 124 21-145 1-137 (276)
299 4fcg_A Uncharacterized protein 99.3 6.5E-12 2.2E-16 126.0 8.3 107 38-145 182-290 (328)
300 1ozn_A Reticulon 4 receptor; N 99.3 7.1E-12 2.4E-16 123.0 8.1 109 39-148 129-241 (285)
301 2z66_A Variable lymphocyte rec 99.3 9E-12 3.1E-16 123.6 8.8 111 38-148 149-264 (306)
302 3zyi_A Leucine-rich repeat-con 99.2 1.7E-11 5.7E-16 128.7 11.1 115 28-143 56-182 (452)
303 1p9a_G Platelet glycoprotein I 99.2 1.9E-11 6.4E-16 120.4 10.8 107 37-145 75-185 (290)
304 3v47_A TOLL-like receptor 5B a 99.2 5.8E-12 2E-16 132.2 7.2 118 28-145 12-142 (455)
305 3zyi_A Leucine-rich repeat-con 99.2 1.3E-11 4.4E-16 129.6 8.7 108 38-148 195-306 (452)
306 3vq2_A TLR4, TOLL-like recepto 99.2 1E-11 3.5E-16 135.3 7.7 110 38-148 447-561 (606)
307 3vq2_A TLR4, TOLL-like recepto 99.2 2.4E-11 8.3E-16 132.3 10.3 123 21-144 5-140 (606)
308 2ft3_A Biglycan; proteoglycan, 99.2 2.7E-11 9.1E-16 121.7 9.6 117 25-145 32-160 (332)
309 3e6j_A Variable lymphocyte rec 99.2 2.7E-11 9.3E-16 114.9 8.9 109 38-148 63-175 (229)
310 2wfh_A SLIT homolog 2 protein 99.2 2.4E-11 8.2E-16 112.0 7.9 86 39-124 54-140 (193)
311 2xwt_C Thyrotropin receptor; s 99.2 1.3E-11 4.6E-16 117.7 6.4 121 21-143 6-141 (239)
312 3t6q_A CD180 antigen; protein- 99.2 3.1E-11 1.1E-15 131.5 10.0 127 18-145 3-142 (606)
313 2id5_A Lingo-1, leucine rich r 99.2 3.6E-11 1.2E-15 127.0 10.1 118 27-144 12-140 (477)
314 1ozn_A Reticulon 4 receptor; N 99.2 6E-11 2.1E-15 116.3 10.6 115 30-144 15-141 (285)
315 2o6r_A Variable lymphocyte rec 99.2 3.2E-11 1.1E-15 109.4 7.9 90 38-127 51-141 (177)
316 3rfs_A Internalin B, repeat mo 99.2 6.5E-11 2.2E-15 115.3 10.6 106 38-144 84-193 (272)
317 3o6n_A APL1; leucine-rich repe 99.2 1.2E-11 3.9E-16 127.3 5.5 107 39-147 248-354 (390)
318 1xku_A Decorin; proteoglycan, 99.2 4.6E-11 1.6E-15 119.8 9.7 107 38-146 191-307 (330)
319 4eco_A Uncharacterized protein 99.2 4.3E-11 1.5E-15 131.1 9.9 106 40-147 489-602 (636)
320 3zyj_A Leucine-rich repeat-con 99.2 6E-11 2.1E-15 124.0 10.1 115 28-143 45-171 (440)
321 1a9n_A U2A', U2A'; complex (nu 99.2 3.6E-11 1.2E-15 109.0 7.2 103 38-145 18-126 (176)
322 1xku_A Decorin; proteoglycan, 99.2 5.7E-11 1.9E-15 119.1 9.4 116 25-144 30-157 (330)
323 3oja_B Anopheles plasmodium-re 99.2 1.6E-11 5.5E-16 133.5 5.6 107 39-147 254-360 (597)
324 2z66_A Variable lymphocyte rec 99.2 1.6E-11 5.6E-16 121.7 5.1 118 22-143 4-137 (306)
325 1nd4_A Aminoglycoside 3'-phosp 99.2 1.1E-10 3.7E-15 112.7 10.5 131 242-386 26-214 (264)
326 4b8c_D Glucose-repressible alc 99.1 3.2E-11 1.1E-15 133.8 7.6 104 39-145 224-329 (727)
327 4ezg_A Putative uncharacterize 99.1 5E-11 1.7E-15 110.2 7.3 83 39-123 88-172 (197)
328 4ay9_X Follicle-stimulating ho 99.1 6.7E-11 2.3E-15 119.7 8.7 107 23-131 6-124 (350)
329 1dce_A Protein (RAB geranylger 99.1 4.5E-11 1.5E-15 128.6 7.8 101 40-144 442-545 (567)
330 4ecn_A Leucine-rich repeat pro 99.1 8.2E-11 2.8E-15 132.1 9.9 105 40-146 729-841 (876)
331 2id5_A Lingo-1, leucine rich r 99.1 5E-11 1.7E-15 125.9 7.8 108 39-148 224-336 (477)
332 1a9n_A U2A', U2A'; complex (nu 99.1 3E-11 1E-15 109.5 4.8 88 38-129 41-131 (176)
333 2ell_A Acidic leucine-rich nuc 99.1 5.4E-11 1.8E-15 106.9 6.2 102 39-144 49-159 (168)
334 3a79_B TLR6, VLRB.59, TOLL-lik 99.1 1.1E-10 3.7E-15 126.0 9.7 119 22-144 26-158 (562)
335 3j0a_A TOLL-like receptor 5; m 99.1 4.2E-11 1.4E-15 135.6 6.6 107 39-148 451-563 (844)
336 2ft3_A Biglycan; proteoglycan, 99.1 6.2E-11 2.1E-15 119.0 7.0 107 38-146 192-308 (332)
337 3j0a_A TOLL-like receptor 5; m 99.1 8.8E-11 3E-15 132.9 9.0 119 23-144 11-135 (844)
338 1ziw_A TOLL-like receptor 3; i 99.1 1.1E-10 3.9E-15 128.8 9.7 117 25-143 3-132 (680)
339 1dce_A Protein (RAB geranylger 99.1 8.4E-11 2.9E-15 126.5 7.7 89 38-129 462-551 (567)
340 2z62_A TOLL-like receptor 4, v 99.1 2.3E-10 7.8E-15 111.6 9.5 108 38-145 51-162 (276)
341 1wwl_A Monocyte differentiatio 99.1 4.5E-11 1.5E-15 118.9 4.3 86 39-124 95-187 (312)
342 3oja_B Anopheles plasmodium-re 99.1 2.8E-10 9.5E-15 123.7 10.7 106 39-145 75-184 (597)
343 4b8c_D Glucose-repressible alc 99.1 4E-11 1.4E-15 133.0 4.0 93 38-132 246-338 (727)
344 2z63_A TOLL-like receptor 4, v 99.1 1.6E-10 5.4E-15 124.8 8.5 109 39-148 421-534 (570)
345 3o53_A Protein LRIM1, AGAP0063 99.1 1E-10 3.5E-15 116.6 6.4 106 39-147 144-252 (317)
346 3t6q_A CD180 antigen; protein- 99.1 1.5E-10 5.3E-15 125.9 7.8 109 39-148 449-563 (606)
347 1ziw_A TOLL-like receptor 3; i 99.1 2.7E-10 9.1E-15 125.9 9.7 90 59-149 532-626 (680)
348 3a79_B TLR6, VLRB.59, TOLL-lik 99.1 2.8E-10 9.5E-15 122.8 9.5 108 39-148 377-513 (562)
349 3o6n_A APL1; leucine-rich repe 99.1 4.5E-10 1.5E-14 115.3 10.7 105 39-145 69-178 (390)
350 2je0_A Acidic leucine-rich nuc 99.0 7.9E-11 2.7E-15 103.5 4.2 88 38-128 41-130 (149)
351 2z63_A TOLL-like receptor 4, v 99.0 4.2E-10 1.4E-14 121.4 9.8 107 37-144 26-136 (570)
352 2z7x_B TOLL-like receptor 1, v 99.0 3.7E-10 1.3E-14 120.5 8.5 108 39-148 348-484 (520)
353 3dxp_A Putative acyl-COA dehyd 99.0 1.1E-09 3.9E-14 111.0 11.3 140 241-386 44-248 (359)
354 2z81_A CD282 antigen, TOLL-lik 99.0 6.9E-10 2.4E-14 119.2 10.2 107 39-148 387-513 (549)
355 4ezg_A Putative uncharacterize 99.0 3.1E-10 1.1E-14 104.8 6.3 101 40-143 45-147 (197)
356 2xwt_C Thyrotropin receptor; s 99.0 3.3E-10 1.1E-14 108.0 6.4 105 38-145 54-169 (239)
357 4glp_A Monocyte differentiatio 99.0 1.4E-10 4.8E-15 115.2 3.6 105 38-143 144-283 (310)
358 2z7x_B TOLL-like receptor 1, v 99.0 3.8E-10 1.3E-14 120.5 6.7 109 37-145 322-434 (520)
359 1wwl_A Monocyte differentiatio 99.0 2.2E-10 7.6E-15 113.9 4.6 86 39-124 149-242 (312)
360 2z80_A TOLL-like receptor 2, v 98.9 1.4E-09 4.7E-14 110.1 7.5 105 38-144 75-186 (353)
361 3oja_A Leucine-rich immune mol 98.9 6.2E-10 2.1E-14 117.7 4.9 101 38-145 33-133 (487)
362 1xeu_A Internalin C; cellular 98.9 3.4E-09 1.1E-13 102.6 9.2 100 39-145 63-163 (263)
363 1h6u_A Internalin H; cell adhe 98.9 1.5E-09 5E-14 107.7 6.7 102 38-145 106-208 (308)
364 1h6u_A Internalin H; cell adhe 98.9 2.8E-09 9.7E-14 105.6 8.5 102 38-145 84-186 (308)
365 4glp_A Monocyte differentiatio 98.9 1.8E-09 6.3E-14 107.1 7.0 105 39-143 91-208 (310)
366 1xeu_A Internalin C; cellular 98.9 3.9E-09 1.3E-13 102.1 9.0 100 39-145 41-141 (263)
367 1h6t_A Internalin B; cell adhe 98.9 2.8E-09 9.6E-14 104.8 8.0 99 39-143 68-167 (291)
368 4fmz_A Internalin; leucine ric 98.9 1.6E-09 5.5E-14 109.2 6.4 104 38-146 220-325 (347)
369 3o53_A Protein LRIM1, AGAP0063 98.9 6.3E-10 2.1E-14 110.9 3.0 101 38-145 33-133 (317)
370 1h6t_A Internalin B; cell adhe 98.8 2.8E-09 9.7E-14 104.7 7.0 101 38-144 89-190 (291)
371 3sg8_A APH(2'')-ID; antibiotic 98.8 8.1E-10 2.8E-14 109.4 2.8 183 241-439 26-288 (304)
372 1ds9_A Outer arm dynein; leuci 98.8 4.3E-11 1.5E-15 110.7 -6.7 103 39-146 48-154 (198)
373 3cvr_A Invasion plasmid antige 98.8 7.4E-09 2.5E-13 111.0 9.5 93 40-145 121-220 (571)
374 3cvr_A Invasion plasmid antige 98.8 8.8E-09 3E-13 110.3 10.1 93 38-143 79-171 (571)
375 1m9s_A Internalin B; cell inva 98.8 7.1E-09 2.4E-13 112.2 8.8 80 39-123 65-144 (605)
376 1m9s_A Internalin B; cell inva 98.8 7.7E-09 2.6E-13 111.9 8.9 100 39-143 87-186 (605)
377 3bz5_A Internalin-J, INLJ; leu 98.8 1.4E-08 4.9E-13 106.3 9.8 95 39-142 64-158 (457)
378 1o6v_A Internalin A; bacterial 98.7 9.7E-09 3.3E-13 108.0 6.9 80 39-123 265-344 (466)
379 1o6v_A Internalin A; bacterial 98.7 1.5E-08 5.2E-13 106.5 8.1 99 40-143 244-342 (466)
380 1jl5_A Outer protein YOPM; leu 98.7 2.9E-08 1E-12 103.9 10.2 96 39-143 131-226 (454)
381 3bz5_A Internalin-J, INLJ; leu 98.7 3E-08 1E-12 103.9 10.0 98 39-144 42-139 (457)
382 3g06_A SSPH2 (leucine-rich rep 98.7 3.4E-08 1.2E-12 107.1 9.0 93 38-143 60-152 (622)
383 1ds9_A Outer arm dynein; leuci 98.7 4.8E-10 1.6E-14 103.6 -4.9 103 39-145 18-128 (198)
384 3g06_A SSPH2 (leucine-rich rep 98.6 1.6E-08 5.5E-13 109.6 5.5 76 63-146 221-298 (622)
385 1jl5_A Outer protein YOPM; leu 98.6 2.7E-08 9.1E-13 104.2 7.0 82 38-131 296-380 (454)
386 4fmz_A Internalin; leucine ric 98.6 5.2E-08 1.8E-12 98.0 8.8 99 39-143 44-143 (347)
387 3r70_A Aminoglycoside phosphot 98.6 1.6E-07 5.4E-12 93.5 11.6 133 240-387 42-238 (320)
388 4ay9_X Follicle-stimulating ho 98.6 2.4E-08 8.2E-13 100.8 5.7 104 33-144 7-116 (350)
389 2ca6_A RAN GTPase-activating p 98.6 4.9E-09 1.7E-13 107.4 -1.6 85 39-123 159-257 (386)
390 2ca6_A RAN GTPase-activating p 98.5 5.9E-09 2E-13 106.8 -1.9 108 39-146 187-317 (386)
391 3goz_A Leucine-rich repeat-con 98.5 1.1E-08 3.7E-13 103.8 -0.0 109 37-145 20-151 (362)
392 4gkh_A Aminoglycoside 3'-phosp 98.5 7.4E-07 2.5E-11 86.2 13.0 135 242-386 31-223 (272)
393 3rw6_A Nuclear RNA export fact 98.5 4.1E-08 1.4E-12 94.3 3.3 87 39-128 141-238 (267)
394 3tdw_A Gentamicin resistance p 98.5 1.3E-06 4.4E-11 86.3 13.0 135 241-386 25-224 (306)
395 3d1u_A Putative fructosamine-3 98.4 9.1E-07 3.1E-11 86.4 11.2 74 241-318 21-97 (288)
396 2ast_B S-phase kinase-associat 98.4 5.6E-08 1.9E-12 97.2 1.0 126 17-143 38-179 (336)
397 2ast_B S-phase kinase-associat 98.3 9.9E-09 3.4E-13 102.8 -5.5 134 2-143 13-153 (336)
398 3ats_A Putative uncharacterize 98.3 2.1E-06 7E-11 86.7 9.9 80 241-320 26-122 (357)
399 3goz_A Leucine-rich repeat-con 98.3 1E-07 3.5E-12 96.6 -0.2 102 43-144 2-121 (362)
400 3ovc_A Hygromycin-B 4-O-kinase 98.3 3.7E-06 1.3E-10 85.0 11.1 73 241-319 47-122 (362)
401 3rw6_A Nuclear RNA export fact 98.2 1.5E-07 5.3E-12 90.2 0.5 77 39-116 170-257 (267)
402 3sb4_A Hypothetical leucine ri 98.2 1.4E-06 4.9E-11 86.8 6.8 94 38-134 225-320 (329)
403 2q83_A YTAA protein; 2635576, 98.1 1.7E-05 5.9E-10 79.2 11.8 140 241-385 38-251 (346)
404 1z7x_W Ribonuclease inhibitor; 98.0 2.3E-07 7.9E-12 97.0 -3.2 107 39-145 284-411 (461)
405 2olc_A MTR kinase, methylthior 98.0 1.8E-05 6.3E-10 80.9 10.8 74 241-316 36-120 (397)
406 1z7x_W Ribonuclease inhibitor; 98.0 1.1E-07 3.9E-12 99.4 -6.1 85 39-123 227-326 (461)
407 3jr1_A Putative fructosamine-3 97.9 0.00012 4E-09 72.1 12.6 137 241-382 42-232 (312)
408 3un9_A NLR family member X1; l 97.9 1.1E-06 3.6E-11 89.4 -2.2 107 39-145 126-252 (372)
409 3un9_A NLR family member X1; l 97.8 1.3E-06 4.5E-11 88.6 -2.0 107 38-144 100-223 (372)
410 3f7w_A Putative fructosamine-3 97.8 0.00011 3.8E-09 71.5 10.7 73 241-317 21-96 (288)
411 2pyw_A Uncharacterized protein 97.6 0.00031 1.1E-08 72.4 12.1 79 356-435 232-313 (420)
412 1io0_A Tropomodulin; LRR prote 97.6 7.9E-06 2.7E-10 74.1 -0.8 86 38-123 35-136 (185)
413 3sb4_A Hypothetical leucine ri 97.5 0.00015 5.2E-09 72.0 8.1 45 85-132 225-270 (329)
414 3rfe_A Platelet glycoprotein I 97.5 0.00011 3.8E-09 62.2 5.4 56 42-99 11-68 (130)
415 1io0_A Tropomodulin; LRR prote 97.4 8.4E-06 2.9E-10 74.0 -2.4 85 39-123 65-164 (185)
416 3ogk_B Coronatine-insensitive 97.4 1.4E-05 4.6E-10 86.4 -1.7 106 38-143 402-524 (592)
417 2ppq_A HSK, HK, homoserine kin 97.4 0.00072 2.5E-08 66.7 10.4 142 241-385 28-216 (322)
418 3feg_A Choline/ethanolamine ki 97.3 0.0008 2.7E-08 68.0 10.1 140 241-385 56-253 (379)
419 1nw1_A Choline kinase (49.2 KD 97.3 0.00077 2.6E-08 69.5 9.6 72 241-318 79-159 (429)
420 3dxq_A Choline/ethanolamine ki 97.2 0.00073 2.5E-08 66.1 8.8 71 240-318 23-95 (301)
421 1zyl_A Hypothetical protein YI 97.2 0.0034 1.2E-07 62.0 13.3 141 242-386 33-223 (328)
422 3csv_A Aminoglycoside phosphot 97.2 0.0023 7.7E-08 63.5 11.6 142 241-387 24-218 (333)
423 3ogk_B Coronatine-insensitive 97.1 0.00014 4.8E-09 78.3 2.8 80 39-119 164-252 (592)
424 3e4g_A ATP synthase subunit S, 97.1 0.0001 3.4E-09 65.6 0.3 83 39-121 61-150 (176)
425 2p1m_B Transport inhibitor res 97.0 6.5E-05 2.2E-09 81.0 -1.3 82 40-121 106-195 (594)
426 2p1m_B Transport inhibitor res 96.9 6E-05 2E-09 81.3 -3.2 105 38-144 396-518 (594)
427 3i1a_A Spectinomycin phosphotr 96.9 0.0052 1.8E-07 61.1 11.2 68 244-318 32-108 (339)
428 3c5i_A Choline kinase; choline 96.8 0.0031 1E-07 63.5 9.3 72 241-317 39-120 (369)
429 3rfe_A Platelet glycoprotein I 96.8 0.0015 5.2E-08 55.1 5.7 57 67-148 12-71 (130)
430 2qg7_A Ethanolamine kinase PV0 96.8 0.0064 2.2E-07 63.0 11.6 73 241-318 114-188 (458)
431 2ra8_A Uncharacterized protein 96.8 0.00017 5.8E-09 72.6 -0.7 105 39-143 193-318 (362)
432 4fdw_A Leucine rich hypothetic 96.8 0.0022 7.4E-08 65.5 7.6 100 39-143 248-356 (401)
433 2yle_A Protein spire homolog 1 96.6 0.01 3.5E-07 54.1 10.1 103 317-438 34-136 (229)
434 4fdw_A Leucine rich hypothetic 96.5 0.0029 1E-07 64.5 6.4 89 39-133 226-321 (401)
435 3f2s_A CK, chetk-alpha, cholin 96.5 0.0088 3E-07 60.6 9.6 141 241-385 58-279 (401)
436 2ra8_A Uncharacterized protein 96.5 0.00026 8.8E-09 71.2 -1.8 105 37-144 170-291 (362)
437 3mes_A Choline kinase; malaria 95.1 0.06 2E-06 55.0 9.1 73 241-318 76-157 (424)
438 1pgv_A TMD-1, tropomodulin TMD 94.9 0.005 1.7E-07 55.7 0.3 85 38-122 40-138 (197)
439 4h09_A Hypothetical leucine ri 94.1 0.076 2.6E-06 53.3 7.1 87 40-131 241-329 (379)
440 4gt6_A Cell surface protein; l 93.8 0.14 4.8E-06 51.7 8.3 96 41-142 267-367 (394)
441 3g15_A CK, chetk-alpha, cholin 93.7 0.2 7E-06 50.7 9.2 30 357-386 245-280 (401)
442 4fs7_A Uncharacterized protein 93.6 0.073 2.5E-06 53.8 5.8 70 58-132 292-363 (394)
443 4h09_A Hypothetical leucine ri 92.7 0.18 6E-06 50.5 7.0 88 40-132 218-307 (379)
444 4gt6_A Cell surface protein; l 92.6 0.17 5.8E-06 51.1 6.7 80 39-122 288-369 (394)
445 3e4g_A ATP synthase subunit S, 91.6 0.039 1.3E-06 48.8 0.4 93 54-146 52-153 (176)
446 4fs7_A Uncharacterized protein 90.6 0.2 6.7E-06 50.6 4.6 78 39-120 297-376 (394)
447 1pgv_A TMD-1, tropomodulin TMD 88.3 0.085 2.9E-06 47.6 -0.2 69 55-123 33-111 (197)
448 4ann_A ESSB; membrane protein, 84.9 2.2 7.5E-05 38.7 7.2 116 289-439 43-158 (215)
449 3cxl_A N-chimerin; SH2, RHO-GA 82.2 0.21 7.1E-06 51.7 -0.8 60 240-302 147-215 (463)
450 2jwa_A Receptor tyrosine-prote 79.3 0.68 2.3E-05 30.1 1.2 10 157-166 13-22 (44)
451 4ano_A ESSB; membrane protein, 77.6 5.2 0.00018 36.3 7.0 115 289-439 48-163 (219)
452 2l2t_A Receptor tyrosine-prote 74.3 1.2 4E-05 29.0 1.3 7 175-181 29-35 (44)
453 2dcv_A Tachystatin-B1; antimic 53.3 6.6 0.00023 24.8 1.7 19 16-38 12-30 (42)
454 2jwa_A Receptor tyrosine-prote 46.3 20 0.00068 23.2 3.2 9 161-169 14-22 (44)
455 1eit_A MU-agatoxin-I, MU-AGA-I 44.4 7 0.00024 23.9 0.8 20 15-39 9-28 (37)
456 2ks1_B Epidermal growth factor 43.2 25 0.00087 22.7 3.3 27 161-187 13-39 (44)
457 2k1k_A Ephrin type-A receptor 42.0 7.9 0.00027 24.3 0.8 16 158-173 13-28 (38)
458 3ls8_A Phosphatidylinositol 3- 38.4 3.7E+02 0.013 28.2 14.1 84 294-385 402-501 (614)
459 2l2t_A Receptor tyrosine-prote 36.1 32 0.0011 22.3 3.0 28 161-188 12-39 (44)
460 1cja_A Protein (actin-fragmin 33.6 2.1E+02 0.0073 27.5 9.6 138 240-387 74-238 (342)
461 1v90_A Delta-paluit1, delta-pa 32.6 17 0.00057 22.4 1.1 21 15-39 9-29 (38)
462 3hhm_A Phosphatidylinositol-4, 28.3 1.9E+02 0.0064 32.8 9.4 26 361-386 937-962 (1091)
463 2lz0_A Uncharacterized protein 26.6 1.6E+02 0.0054 22.6 6.3 39 57-96 14-53 (100)
464 2lz0_A Uncharacterized protein 22.7 1E+02 0.0034 23.7 4.4 47 73-120 6-53 (100)
465 2x6h_A GH13170P, VPS34, phosph 21.4 49 0.0017 35.5 3.0 84 294-385 476-575 (696)
No 1
>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}
Probab=100.00 E-value=3.8e-54 Score=432.71 Aligned_cols=258 Identities=26% Similarity=0.427 Sum_probs=207.9
Q ss_pred HHhhcccCCCCceEEEEEEEc------CCcEEEEEEccCccchhHHHHHHHHHHHhhcCCCCccceeeEEEecCeeEEEE
Q 008707 237 NNFCKKIGKGSFGSVYYGKMK------DGKEVAVKIMADSCSHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVY 310 (557)
Q Consensus 237 ~~~~~~lG~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~lv~ 310 (557)
+.+.++||+|+||+||+|++. +++.||||+++.......++|.+|+++|++++|||||+++|+|.+.+..++||
T Consensus 43 ~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~lV~ 122 (329)
T 4aoj_A 43 IVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLMVF 122 (329)
T ss_dssp EEEEEEEEECSSEEEEEEEESSSCC---CEEEEEEEESCCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEEEEE
T ss_pred eEEEEEEccCCCcEEEEEEECCcccCCCCeEEEEEEECcCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEE
Confidence 345788999999999999875 47889999998766666788999999999999999999999999999999999
Q ss_pred EecCCCChhhhhhccC------------CCCCcCHHHHHHHHHHHHHHHHHHHcCCCCCeEeeccCCCCEEeCCCCcEEE
Q 008707 311 EYMHNGTLRDRLHGSV------------NQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKV 378 (557)
Q Consensus 311 e~~~~gsL~~~l~~~~------------~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl 378 (557)
|||++|+|.++++... ....+++..++.|+.|||+||+|||+ ++|+||||||+|||+++++.+||
T Consensus 123 Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~---~~iiHRDLKp~NILl~~~~~~Ki 199 (329)
T 4aoj_A 123 EYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAG---LHFVHRDLATRNCLVGQGLVVKI 199 (329)
T ss_dssp ECCTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEEETTTEEEE
T ss_pred EcCCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHHHhc---CCeecccccHhhEEECCCCcEEE
Confidence 9999999999997542 13468999999999999999999998 99999999999999999999999
Q ss_pred ecccCccccCCCC-ccccccccCCCCccCCcccCCCCCCcccceehhHHHHHHHHh-CCCCCCCCCccccccHHHHHHHH
Q 008707 379 SDFGLSRQAEEDL-THISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELIS-GKKPVSVEDFGAELNIVHWARSM 456 (557)
Q Consensus 379 ~Dfgla~~~~~~~-~~~~~~~~g~~~y~aPE~l~~~~~s~~~DvwslG~ll~ellt-g~~pf~~~~~~~~~~~~~~~~~~ 456 (557)
+|||+++...... ........||+.|||||++.+..++.++|||||||++|||+| |+.||...... + +...
T Consensus 200 ~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~~sDvwS~Gvvl~Ellt~G~~Pf~~~~~~------~-~~~~ 272 (329)
T 4aoj_A 200 GDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNT------E-AIDC 272 (329)
T ss_dssp CCCC----------------CCCCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSSCHH------H-HHHH
T ss_pred cccccceeccCCCcceecCcccccccccChhhhcCCCCCccccccchHHHHHHHHcCCCCCCCCCCHH------H-HHHH
Confidence 9999998764332 222334568999999999999999999999999999999999 89999743321 1 1222
Q ss_pred HhcCCccccccccccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhhhh
Q 008707 457 IKKGDVISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKI 513 (557)
Q Consensus 457 ~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~evl~~L~~~~~~ 513 (557)
+.++..... +...+..+.+++.+||+.||++||||+||++.|+.+.+.
T Consensus 273 i~~g~~~~~---------p~~~~~~~~~li~~cl~~dP~~RPs~~ei~~~L~~l~~~ 320 (329)
T 4aoj_A 273 ITQGRELER---------PRACPPEVYAIMRGCWQREPQQRHSIKDVHARLQALAQA 320 (329)
T ss_dssp HHHTCCCCC---------CTTCCHHHHHHHHHHCCSSTTTSCCHHHHHHHHHHHHHS
T ss_pred HHcCCCCCC---------cccccHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHhhC
Confidence 333332211 122344788999999999999999999999999998764
No 2
>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*
Probab=100.00 E-value=1.4e-54 Score=430.02 Aligned_cols=259 Identities=28% Similarity=0.453 Sum_probs=214.5
Q ss_pred HHHhhcccCCCCceEEEEEEEc------CCcEEEEEEccCccchhHHHHHHHHHHHhhcCCCCccceeeEEEecCeeEEE
Q 008707 236 TNNFCKKIGKGSFGSVYYGKMK------DGKEVAVKIMADSCSHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILV 309 (557)
Q Consensus 236 ~~~~~~~lG~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~lv 309 (557)
.+.+.+.||+|+||.||+|.+. ++..||||+++.......++|.+|+++|++++|||||+++|+|.+++..++|
T Consensus 14 ~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~lV 93 (299)
T 4asz_A 14 NIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIMV 93 (299)
T ss_dssp GEEEEEEEEC--CCCEEEEEECSCC----CEEEEEEEECSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEEEE
T ss_pred HeEEeeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCCCChHHHHHHHHHHHHHHhCCCCCCccEEEEEeeCCEEEEE
Confidence 3456789999999999999864 4778999999876666678899999999999999999999999999999999
Q ss_pred EEecCCCChhhhhhccC----------CCCCcCHHHHHHHHHHHHHHHHHHHcCCCCCeEeeccCCCCEEeCCCCcEEEe
Q 008707 310 YEYMHNGTLRDRLHGSV----------NQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVS 379 (557)
Q Consensus 310 ~e~~~~gsL~~~l~~~~----------~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~ 379 (557)
||||++|+|.++++... ....+++..++.++.|||+||+|||+ ++|+||||||+|||+++++.+||+
T Consensus 94 ~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~---~~iiHRDlKp~NILl~~~~~~Ki~ 170 (299)
T 4asz_A 94 FEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLAS---QHFVHRDLATRNCLVGENLLVKIG 170 (299)
T ss_dssp EECCTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEECGGGCEEEC
T ss_pred EEcCCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHh---CCcccCccCHhhEEECCCCcEEEC
Confidence 99999999999997531 24579999999999999999999998 999999999999999999999999
Q ss_pred cccCccccCCCCc-cccccccCCCCccCCcccCCCCCCcccceehhHHHHHHHHh-CCCCCCCCCccccccHHHHHHHHH
Q 008707 380 DFGLSRQAEEDLT-HISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELIS-GKKPVSVEDFGAELNIVHWARSMI 457 (557)
Q Consensus 380 Dfgla~~~~~~~~-~~~~~~~g~~~y~aPE~l~~~~~s~~~DvwslG~ll~ellt-g~~pf~~~~~~~~~~~~~~~~~~~ 457 (557)
|||+|+....... .......||+.|||||++.+..|+.++|||||||++|||+| |+.||...+.. + +...+
T Consensus 171 DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~k~DVwS~Gvvl~Ellt~G~~Pf~~~~~~------~-~~~~i 243 (299)
T 4asz_A 171 DFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNN------E-VIECI 243 (299)
T ss_dssp CCSCHHHHTGGGCEEETTTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHH------H-HHHHH
T ss_pred CcccceecCCCCceeecCceecChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCHH------H-HHHHH
Confidence 9999987544322 22233458999999999999999999999999999999999 89999743321 1 22233
Q ss_pred hcCCccccccccccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhhhh
Q 008707 458 KKGDVISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKI 513 (557)
Q Consensus 458 ~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~evl~~L~~~~~~ 513 (557)
..+..... +...+.++.+++.+||+.||++|||++||.+.|+++.+.
T Consensus 244 ~~~~~~~~---------p~~~~~~~~~li~~cl~~dP~~RPs~~~i~~~L~~~~~~ 290 (299)
T 4asz_A 244 TQGRVLQR---------PRTCPQEVYELMLGCWQREPHMRKNIKGIHTLLQNLAKA 290 (299)
T ss_dssp HHTCCCCC---------CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred HcCCCCCC---------CccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHhc
Confidence 34433221 122345788999999999999999999999999988764
No 3
>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A
Probab=100.00 E-value=2.7e-54 Score=429.74 Aligned_cols=261 Identities=23% Similarity=0.399 Sum_probs=213.4
Q ss_pred HHHHHHHhhcccCCCCceEEEEEEEc------CCcEEEEEEccCccc-hhHHHHHHHHHHHhhcCCCCccceeeEEEecC
Q 008707 232 LEEATNNFCKKIGKGSFGSVYYGKMK------DGKEVAVKIMADSCS-HRTQQFVTEVALLSRIHHRNLVPLIGYCEEEH 304 (557)
Q Consensus 232 ~~~~~~~~~~~lG~G~~g~Vy~~~~~------~~~~vavK~~~~~~~-~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~ 304 (557)
+...+++|.++||+|+||+||+|.+. +++.||||+++.... ...+.|.+|+.++++++|||||+++|+|.+++
T Consensus 23 i~~~~~~~~~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~ 102 (308)
T 4gt4_A 23 ISLSAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVTKDQ 102 (308)
T ss_dssp CCGGGEEEEEEEEECSSCEEEEEEEC-------CEEEEEEECCC-CCC-CHHHHHHHHHHHHHCCCTTBCCEEEEECSSS
T ss_pred CCHHHCeEeeEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECcccChHHHHHHHHHHHHHHhCCCCCCCCcceEEEECC
Confidence 33345568899999999999999873 467899999975433 34578999999999999999999999999999
Q ss_pred eeEEEEEecCCCChhhhhhccC-------------CCCCcCHHHHHHHHHHHHHHHHHHHcCCCCCeEeeccCCCCEEeC
Q 008707 305 QRILVYEYMHNGTLRDRLHGSV-------------NQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLD 371 (557)
Q Consensus 305 ~~~lv~e~~~~gsL~~~l~~~~-------------~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~dlk~~NIll~ 371 (557)
..++|||||++|+|.+++.... ....+++..++.|+.|||+||+|||+ ++|+||||||+||||+
T Consensus 103 ~~~lV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~---~~iiHRDLK~~NILl~ 179 (308)
T 4gt4_A 103 PLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSS---HHVVHKDLATRNVLVY 179 (308)
T ss_dssp SCEEEEECCSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEEC
T ss_pred EEEEEEEcCCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHh---CCCCCCCccccceEEC
Confidence 9999999999999999996432 12458999999999999999999999 9999999999999999
Q ss_pred CCCcEEEecccCccccCCCC-ccccccccCCCCccCCcccCCCCCCcccceehhHHHHHHHHh-CCCCCCCCCccccccH
Q 008707 372 INMRAKVSDFGLSRQAEEDL-THISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELIS-GKKPVSVEDFGAELNI 449 (557)
Q Consensus 372 ~~~~~kl~Dfgla~~~~~~~-~~~~~~~~g~~~y~aPE~l~~~~~s~~~DvwslG~ll~ellt-g~~pf~~~~~~~~~~~ 449 (557)
+++.+||+|||+++...... ........||+.|||||++.+..|+.++|||||||++|||+| |+.||.+.+..
T Consensus 180 ~~~~~Ki~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~~s~ksDVwSfGvvl~El~t~g~~Pf~~~~~~----- 254 (308)
T 4gt4_A 180 DKLNVKISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQ----- 254 (308)
T ss_dssp GGGCEEECCSCCBCGGGGGGCBCSSSSSCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTCCHH-----
T ss_pred CCCCEEECCcccceeccCCCceeEecccccCCcccCHHHHhCCCCCccchhhhHHHHHHHHHhCCCCCCCCCCHH-----
Confidence 99999999999998754332 222334568999999999999999999999999999999999 89999744321
Q ss_pred HHHHHHHHhcCCccccccccccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhh
Q 008707 450 VHWARSMIKKGDVISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSI 511 (557)
Q Consensus 450 ~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~evl~~L~~~~ 511 (557)
+ +...+..+..... +...+..+.+++.+||+.||++||||+||++.|+...
T Consensus 255 -~-~~~~i~~~~~~~~---------p~~~~~~~~~li~~C~~~dP~~RPs~~ei~~~L~a~~ 305 (308)
T 4gt4_A 255 -D-VVEMIRNRQVLPC---------PDDCPAWVYALMIECWNEFPSRRPRFKDIHSRLRAWG 305 (308)
T ss_dssp -H-HHHHHHTTCCCCC---------CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSC
T ss_pred -H-HHHHHHcCCCCCC---------cccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHhcc
Confidence 1 2233344433221 1223457889999999999999999999999998754
No 4
>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}
Probab=100.00 E-value=3.1e-53 Score=420.41 Aligned_cols=258 Identities=30% Similarity=0.491 Sum_probs=203.4
Q ss_pred HHhhcccCCCCceEEEEEEEcCCcEEEEEEccCc--cchhHHHHHHHHHHHhhcCCCCccceeeEEEecCeeEEEEEecC
Q 008707 237 NNFCKKIGKGSFGSVYYGKMKDGKEVAVKIMADS--CSHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYEYMH 314 (557)
Q Consensus 237 ~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~lv~e~~~ 314 (557)
+.+.++||+|+||+||+|.+++ .||||+++.. .....+.|.+|++++++++|||||+++|++.+ +..++|||||+
T Consensus 38 l~l~~~iG~G~fG~Vy~~~~~~--~vAvK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~-~~~~iVmEy~~ 114 (307)
T 3omv_A 38 VMLSTRIGSGSFGTVYKGKWHG--DVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTK-DNLAIVTQWCE 114 (307)
T ss_dssp CCEEEECCCCSSSEEEEEESSS--EEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS-SSCEEEEECCS
T ss_pred eEEeeEEeeCCCcEEEEEEECC--cEEEEEEEecCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEC-CeEEEEEEcCC
Confidence 3578999999999999998763 5999998643 23455789999999999999999999998865 56899999999
Q ss_pred CCChhhhhhccCCCCCcCHHHHHHHHHHHHHHHHHHHcCCCCCeEeeccCCCCEEeCCCCcEEEecccCccccCCCC-cc
Q 008707 315 NGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEEDL-TH 393 (557)
Q Consensus 315 ~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfgla~~~~~~~-~~ 393 (557)
+|+|.++++.. ...+++..+..|+.|||+||+|||+ ++|+||||||+|||+++++.+||+|||+|+...... ..
T Consensus 115 gGsL~~~l~~~--~~~l~~~~~~~i~~qia~gL~yLH~---~~IiHRDlKp~NILl~~~~~~Ki~DFGla~~~~~~~~~~ 189 (307)
T 3omv_A 115 GSSLYKHLHVQ--ETKFQMFQLIDIARQTAQGMDYLHA---KNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQ 189 (307)
T ss_dssp SCBHHHHHHTS--CCCCCHHHHHHHHHHHHHHHHHHHH---TTCBCSCCCSSSEEEETTEEEEECCCSSCBC--------
T ss_pred CCCHHHHHhhc--CCCCCHHHHHHHHHHHHHHHHHHHH---CCccCCccCHHHEEECCCCcEEEeeccCceecccCCcce
Confidence 99999999743 4569999999999999999999998 999999999999999999999999999998754322 22
Q ss_pred ccccccCCCCccCCcccCC---CCCCcccceehhHHHHHHHHhCCCCCCCCCccccccHHHHHHHHHhcCCccccccccc
Q 008707 394 ISSVARGTVGYLDPEYYGN---QQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPVL 470 (557)
Q Consensus 394 ~~~~~~g~~~y~aPE~l~~---~~~s~~~DvwslG~ll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l 470 (557)
......||+.|||||++.+ ..|+.++|||||||++|||+||+.||...+.. ..+...+..+... +.+
T Consensus 190 ~~~~~~GT~~ymAPE~l~~~~~~~y~~ksDVwS~Gvvl~Elltg~~Pf~~~~~~------~~~~~~~~~~~~~----p~~ 259 (307)
T 3omv_A 190 QVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNR------DQIIFMVGRGYAS----PDL 259 (307)
T ss_dssp ----CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCH------HHHHHHHHTTCCC----CCS
T ss_pred eecccccCCCccCHHHhhccCCCCCCcHHHhHhHHHHHHHHHHCCCCCCCCChH------HHHHHHHhcCCCC----CCc
Confidence 2344569999999999864 35899999999999999999999999743321 1122223332211 111
Q ss_pred cCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhhhh
Q 008707 471 IGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKI 513 (557)
Q Consensus 471 ~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~evl~~L~~~~~~ 513 (557)
.......+..+.+++.+||+.||++||||+||++.|+.+...
T Consensus 260 -~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ei~~~Le~l~~~ 301 (307)
T 3omv_A 260 -SKLYKNCPKAMKRLVADCVKKVKEERPLFPQILSSIELLQHS 301 (307)
T ss_dssp -TTSCTTSCHHHHHHHHHHTCSSSTTSCCHHHHHHHHHHHHTT
T ss_pred -ccccccchHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhcc
Confidence 112223345788999999999999999999999999887654
No 5
>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*
Probab=100.00 E-value=4.4e-52 Score=416.09 Aligned_cols=264 Identities=24% Similarity=0.269 Sum_probs=212.0
Q ss_pred HHhhcccCCCCceEEEEEEEc-CCcEEEEEEccCccchhHHHHHHHHHHHhhcCCCCccceeeEEEecCeeEEEEEecCC
Q 008707 237 NNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCSHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYEYMHN 315 (557)
Q Consensus 237 ~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~lv~e~~~~ 315 (557)
+++.++||+|+||.||+|.++ +|+.||||+++.... ..+|+.+++.++|||||++++++.+++..|+|||||+|
T Consensus 60 ~~~~~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~~~-----~~~E~~il~~l~HpnIV~l~~~~~~~~~~~ivmEy~~g 134 (336)
T 4g3f_A 60 MTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVF-----RVEELVACAGLSSPRIVPLYGAVREGPWVNIFMELLEG 134 (336)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTC-----CTHHHHTTTTCCCTTBCCEEEEEEETTEEEEEECCCTT
T ss_pred eEeCcEeccCCCeEEEEEEECCCCCEEEEEEECHHHh-----HHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeccCC
Confidence 345678999999999999876 589999999875322 24699999999999999999999999999999999999
Q ss_pred CChhhhhhccCCCCCcCHHHHHHHHHHHHHHHHHHHcCCCCCeEeeccCCCCEEeCCCC-cEEEecccCccccCCCCcc-
Q 008707 316 GTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINM-RAKVSDFGLSRQAEEDLTH- 393 (557)
Q Consensus 316 gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~dlk~~NIll~~~~-~~kl~Dfgla~~~~~~~~~- 393 (557)
|+|.++++. ...+++..+..++.||+.||+|||+ ++|+||||||+||||+.++ .+||+|||+|+........
T Consensus 135 g~L~~~l~~---~~~l~e~~~~~~~~qi~~aL~ylH~---~~IiHRDlKp~NILl~~~g~~vKl~DFGla~~~~~~~~~~ 208 (336)
T 4g3f_A 135 GSLGQLIKQ---MGCLPEDRALYYLGQALEGLEYLHT---RRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGK 208 (336)
T ss_dssp CBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHT---TTEECSCCCGGGEEECTTSCCEEECCCTTCEEC-------
T ss_pred CcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHH---CCceecccCHHHEEEeCCCCEEEEeeCCCCeEccCCCccc
Confidence 999999974 3569999999999999999999998 9999999999999999887 5999999999876543221
Q ss_pred ---ccccccCCCCccCCcccCCCCCCcccceehhHHHHHHHHhCCCCCCCCCccccccHHHHHHHHHhcCCccccccccc
Q 008707 394 ---ISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPVL 470 (557)
Q Consensus 394 ---~~~~~~g~~~y~aPE~l~~~~~s~~~DvwslG~ll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l 470 (557)
......||+.|||||++.+..|+.++|||||||++|||+||+.||...+.... ... +..+...
T Consensus 209 ~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~~~~--~~~-----i~~~~~~------- 274 (336)
T 4g3f_A 209 SLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRGPL--CLK-----IASEPPP------- 274 (336)
T ss_dssp -----CCCCCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSTTTCCSCC--HHH-----HHHSCCG-------
T ss_pred ceecCCccccCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHHH--HHH-----HHcCCCC-------
Confidence 12335699999999999999999999999999999999999999975443221 111 1111110
Q ss_pred cCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhhhhhcCCCCccccCC
Q 008707 471 IGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKIEKGGDQKFSSSS 525 (557)
Q Consensus 471 ~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~evl~~L~~~~~~~~~~~~~~~~~~ 525 (557)
..+.+...+..+.+++.+||+.||++|||++||++.|.........-..+|-...
T Consensus 275 ~~~~~~~~s~~~~~li~~~L~~dP~~R~sa~el~~~l~~~l~~~~~l~hPw~~~~ 329 (336)
T 4g3f_A 275 IREIPPSCAPLTAQAIQEGLRKEPVHRASAMELRRKVGKALQEVGGLKSPWKGEY 329 (336)
T ss_dssp GGGSCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHTTSSCSCSSSSC
T ss_pred chhcCccCCHHHHHHHHHHccCCHhHCcCHHHHHHHHHHHHhhhhhccCCCcCCC
Confidence 0011222334788999999999999999999999999998877666666665433
No 6
>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*
Probab=100.00 E-value=4.9e-52 Score=417.64 Aligned_cols=249 Identities=26% Similarity=0.375 Sum_probs=201.5
Q ss_pred HHHhhcccCCCCceEEEEEEEc-CCcEEEEEEccCc--cchhHHHHHHHHHHHhhcCCCCccceeeEEEecCeeEEEEEe
Q 008707 236 TNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADS--CSHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYEY 312 (557)
Q Consensus 236 ~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~lv~e~ 312 (557)
.|++.+.||+|+||+||+|.+. +|+.||||++... .....+.+.+|++++++++|||||++++++.+++..|+||||
T Consensus 25 ~Y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~yiVmEy 104 (350)
T 4b9d_A 25 KYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRESFEENGSLYIVMDY 104 (350)
T ss_dssp CEEEEEEC------CEEEEEETTTCCEEEEEEEECTTSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred ceEEeEEEecCCCeEEEEEEECCCCCEEEEEEEehHHCCHHHHHHHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEEeC
Confidence 3667899999999999999875 6899999998653 234457899999999999999999999999999999999999
Q ss_pred cCCCChhhhhhccCCCCCcCHHHHHHHHHHHHHHHHHHHcCCCCCeEeeccCCCCEEeCCCCcEEEecccCccccCCCCc
Q 008707 313 MHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEEDLT 392 (557)
Q Consensus 313 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfgla~~~~~~~~ 392 (557)
|+||+|.+++... ....+++..++.++.||+.||+|||+ ++|+||||||+|||++.++.+||+|||+|+.......
T Consensus 105 ~~gg~L~~~i~~~-~~~~~~e~~~~~~~~qi~~aL~ylH~---~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~~ 180 (350)
T 4b9d_A 105 CEGGDLFKRINAQ-KGVLFQEDQILDWFVQICLALKHVHD---RKILHRDIKSQNIFLTKDGTVQLGDFGIARVLNSTVE 180 (350)
T ss_dssp CTTCBHHHHHHHT-TTCCCCHHHHHHHHHHHHHHHHHHHH---TTCEETTCCGGGEEECTTCCEEECSTTEESCCCHHHH
T ss_pred CCCCcHHHHHHHc-CCCCCCHHHHHHHHHHHHHHHHHHHH---CCeeeccCCHHHEEECCCCCEEEcccccceeecCCcc
Confidence 9999999999753 34567899999999999999999998 9999999999999999999999999999987654322
Q ss_pred cccccccCCCCccCCcccCCCCCCcccceehhHHHHHHHHhCCCCCCCCCccccccHHHHHHHHHhcCCccccccccccC
Q 008707 393 HISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPVLIG 472 (557)
Q Consensus 393 ~~~~~~~g~~~y~aPE~l~~~~~s~~~DvwslG~ll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~ 472 (557)
......||+.|||||++.+..|+.++|||||||++|||+||+.||.+.+. .+.... +..+.... +..
T Consensus 181 -~~~~~~GT~~YmAPE~l~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~------~~~~~~-i~~~~~~~-----~~~ 247 (350)
T 4b9d_A 181 -LARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAGSM------KNLVLK-IISGSFPP-----VSL 247 (350)
T ss_dssp -HHHHHHSCCTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSH------HHHHHH-HHHTCCCC-----CCT
T ss_pred -cccccCCCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCH------HHHHHH-HHcCCCCC-----CCc
Confidence 12335699999999999999999999999999999999999999975432 222222 22232211 111
Q ss_pred CCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 008707 473 NVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 505 (557)
Q Consensus 473 ~~~~~~~~~l~~li~~cl~~~P~~RPt~~evl~ 505 (557)
..+.++.+++.+||+.||++|||++|+++
T Consensus 248 ----~~s~~~~~li~~~L~~dP~~R~s~~e~l~ 276 (350)
T 4b9d_A 248 ----HYSYDLRSLVSQLFKRNPRDRPSVNSILE 276 (350)
T ss_dssp ----TSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred ----cCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 22346889999999999999999999986
No 7
>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*
Probab=100.00 E-value=7.5e-52 Score=415.63 Aligned_cols=247 Identities=24% Similarity=0.350 Sum_probs=205.9
Q ss_pred HHhhcccCCCCceEEEEEEEc-CCcEEEEEEccCccchhHHHHHHHHHHHhhcCCCCccceeeEEEecCeeEEEEEecCC
Q 008707 237 NNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCSHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYEYMHN 315 (557)
Q Consensus 237 ~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~lv~e~~~~ 315 (557)
|++.++||+|+||+||+|.++ +|+.||||++........+.+.+|+++|+.++|||||++++++.+++..|+|||||+|
T Consensus 76 y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~ivmEy~~g 155 (346)
T 4fih_A 76 LDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEG 155 (346)
T ss_dssp EEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCSSGGGGHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEECCCTT
T ss_pred cEEeEEeecCcCeEEEEEEECCCCCEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeCCCC
Confidence 455788999999999999876 6999999999755445556788999999999999999999999999999999999999
Q ss_pred CChhhhhhccCCCCCcCHHHHHHHHHHHHHHHHHHHcCCCCCeEeeccCCCCEEeCCCCcEEEecccCccccCCCCcccc
Q 008707 316 GTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEEDLTHIS 395 (557)
Q Consensus 316 gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfgla~~~~~~~~~~~ 395 (557)
|+|.+++.. ..+++..+..++.||+.||+|||+ ++|+||||||+|||++.++.+||+|||+|+........ .
T Consensus 156 g~L~~~l~~----~~l~e~~~~~~~~qi~~aL~ylH~---~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~~~-~ 227 (346)
T 4fih_A 156 GALTDIVTH----TRMNEEQIAAVCLAVLQALSVLHA---QGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPR-R 227 (346)
T ss_dssp EEHHHHHHH----SCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTCCEEECCCTTCEECCSSSCC-B
T ss_pred CcHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHH---CCcccccCCHHHEEECCCCCEEEecCcCceecCCCCCc-c
Confidence 999999973 458999999999999999999999 99999999999999999999999999999887554332 3
Q ss_pred ccccCCCCccCCcccCCCCCCcccceehhHHHHHHHHhCCCCCCCCCccccccHHHHHHHHHhcCCccccccccccCCCC
Q 008707 396 SVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPVLIGNVK 475 (557)
Q Consensus 396 ~~~~g~~~y~aPE~l~~~~~s~~~DvwslG~ll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~ 475 (557)
....||+.|||||++.+..|+.++||||+||++|||++|+.||.+.+... .. ..+..+....... .
T Consensus 228 ~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~---~~----~~i~~~~~~~~~~-------~ 293 (346)
T 4fih_A 228 KSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLK---AM----KMIRDNLPPRLKN-------L 293 (346)
T ss_dssp CCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHH---HH----HHHHHSSCCCCSC-------G
T ss_pred cccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHH---HH----HHHHcCCCCCCCc-------c
Confidence 34579999999999999999999999999999999999999997443211 11 1222221111111 1
Q ss_pred HHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 008707 476 IESIWRIAEVAIQCVEQRGFSRPKMQEIVL 505 (557)
Q Consensus 476 ~~~~~~l~~li~~cl~~~P~~RPt~~evl~ 505 (557)
......+.+++.+||+.||++|||++|+++
T Consensus 294 ~~~s~~~~dli~~~L~~dP~~R~ta~e~l~ 323 (346)
T 4fih_A 294 HKVSPSLKGFLDRLLVRDPAQRATAAELLK 323 (346)
T ss_dssp GGSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred ccCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 122346889999999999999999999976
No 8
>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}
Probab=100.00 E-value=5.3e-51 Score=401.46 Aligned_cols=244 Identities=29% Similarity=0.429 Sum_probs=197.1
Q ss_pred HhhcccCCCCceEEEEEEEc-CCcEEEEEEccCc--cchhHHHHHHHHHHHhhcCCCCccceeeEEEe----cCeeEEEE
Q 008707 238 NFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADS--CSHRTQQFVTEVALLSRIHHRNLVPLIGYCEE----EHQRILVY 310 (557)
Q Consensus 238 ~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~----~~~~~lv~ 310 (557)
++.++||+|+||+||+|.+. +++.||+|++... .....+.|.+|++++++++|||||++++++.+ ++..++||
T Consensus 29 ~~~~~iG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~lvm 108 (290)
T 3fpq_A 29 KFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVT 108 (290)
T ss_dssp EEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEEETTEEEEEEEE
T ss_pred EeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEeeccCCCcEEEEEE
Confidence 35678999999999999876 5889999998643 23445679999999999999999999999865 34579999
Q ss_pred EecCCCChhhhhhccCCCCCcCHHHHHHHHHHHHHHHHHHHcCCCCC--eEeeccCCCCEEeC-CCCcEEEecccCcccc
Q 008707 311 EYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPG--IIHRDVKSSNILLD-INMRAKVSDFGLSRQA 387 (557)
Q Consensus 311 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~--ivH~dlk~~NIll~-~~~~~kl~Dfgla~~~ 387 (557)
|||+||+|.+++.. ...+++..+..++.||+.||+|||+ ++ |+||||||+|||++ .++.+||+|||+|+..
T Consensus 109 Ey~~gg~L~~~l~~---~~~l~~~~~~~~~~qi~~aL~ylH~---~~~~IiHRDlKp~NILl~~~~g~vKl~DFGla~~~ 182 (290)
T 3fpq_A 109 ELMTSGTLKTYLKR---FKVMKIKVLRSWCRQILKGLQFLHT---RTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLK 182 (290)
T ss_dssp ECCCSCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHT---SSSCCCCCCCCGGGEEESSTTSCEEECCTTGGGGC
T ss_pred eCCCCCCHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHH---CCCCEEecccChhheeEECCCCCEEEEeCcCCEeC
Confidence 99999999999974 4578999999999999999999998 66 99999999999997 4789999999999865
Q ss_pred CCCCccccccccCCCCccCCcccCCCCCCcccceehhHHHHHHHHhCCCCCCCCCccccccHHHHHHHHHhcCCcccccc
Q 008707 388 EEDLTHISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVD 467 (557)
Q Consensus 388 ~~~~~~~~~~~~g~~~y~aPE~l~~~~~s~~~DvwslG~ll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 467 (557)
.... .....||+.|||||++.+ .|+.++|||||||++|||+||+.||...... . .+...+..+.....++
T Consensus 183 ~~~~---~~~~~GTp~YmAPE~~~~-~y~~~~DiwSlGvilyelltg~~Pf~~~~~~-----~-~~~~~i~~~~~~~~~~ 252 (290)
T 3fpq_A 183 RASF---AKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSECQNA-----A-QIYRRVTSGVKPASFD 252 (290)
T ss_dssp CTTS---BEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTTCSSH-----H-HHHHHHTTTCCCGGGG
T ss_pred CCCc---cCCcccCccccCHHHcCC-CCCcHHHHHHHHHHHHHHHHCCCCCCCCCcH-----H-HHHHHHHcCCCCCCCC
Confidence 4322 234579999999999876 5999999999999999999999999743221 1 1222333332221111
Q ss_pred ccccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 008707 468 PVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 505 (557)
Q Consensus 468 ~~l~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~evl~ 505 (557)
. .. ..++.+++.+||+.||++|||++|+++
T Consensus 253 ~----~~----~~~~~~li~~~L~~dP~~R~s~~e~l~ 282 (290)
T 3fpq_A 253 K----VA----IPEVKEIIEGCIRQNKDERYSIKDLLN 282 (290)
T ss_dssp G----CC----CHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred c----cC----CHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 1 11 236789999999999999999999975
No 9
>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...
Probab=100.00 E-value=7.4e-52 Score=409.57 Aligned_cols=246 Identities=24% Similarity=0.368 Sum_probs=206.1
Q ss_pred HHHhhcccCCCCceEEEEEEEc-CCcEEEEEEccCcc---chhHHHHHHHHHHHhhcCCCCccceeeEEEecCeeEEEEE
Q 008707 236 TNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSC---SHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYE 311 (557)
Q Consensus 236 ~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~lv~e 311 (557)
.|++.+.||+|+||+||+|... +|+.||||++.+.. ....+.+.+|++++++++|||||++++++.+++..|+|||
T Consensus 33 dy~i~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~yivmE 112 (311)
T 4aw0_A 33 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLS 112 (311)
T ss_dssp GEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred ccEEEEEEecccCeEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEEe
Confidence 3677899999999999999875 68999999986432 2345678999999999999999999999999999999999
Q ss_pred ecCCCChhhhhhccCCCCCcCHHHHHHHHHHHHHHHHHHHcCCCCCeEeeccCCCCEEeCCCCcEEEecccCccccCCCC
Q 008707 312 YMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEEDL 391 (557)
Q Consensus 312 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfgla~~~~~~~ 391 (557)
|++||+|.+++.. .+.+++..+..++.||+.||+|||+ ++|+||||||+|||++.++.+||+|||+|+......
T Consensus 113 y~~gG~L~~~i~~---~~~l~e~~~~~~~~qi~~al~ylH~---~~IiHRDlKPeNILl~~~g~vKl~DFGla~~~~~~~ 186 (311)
T 4aw0_A 113 YAKNGELLKYIRK---IGSFDETCTRFYTAEIVSALEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPES 186 (311)
T ss_dssp CCTTEEHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTSCEEECCCTTCEECCTTT
T ss_pred cCCCCCHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHH---CCCccCCCCHHHeEEcCCCCEEEEEcCCceecCCCC
Confidence 9999999999974 4579999999999999999999999 999999999999999999999999999999765432
Q ss_pred -ccccccccCCCCccCCcccCCCCCCcccceehhHHHHHHHHhCCCCCCCCCccccccHHHHHHHHHhcCCccccccccc
Q 008707 392 -THISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPVL 470 (557)
Q Consensus 392 -~~~~~~~~g~~~y~aPE~l~~~~~s~~~DvwslG~ll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l 470 (557)
.......+||+.|||||++.+..|+.++||||+||++|||+||+.||.+.+.. +. ...+..+... +
T Consensus 187 ~~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~------~~-~~~i~~~~~~------~ 253 (311)
T 4aw0_A 187 KQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEG------LI-FAKIIKLEYD------F 253 (311)
T ss_dssp TCCCBCCCCSCGGGCCHHHHHHSCBCHHHHHHHHHHHHHHHHHSSCSSCCSSHH------HH-HHHHHHTCCC------C
T ss_pred CcccccCcccCcccCCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHH------HH-HHHHHcCCCC------C
Confidence 22344567999999999999999999999999999999999999999754321 11 1222223221 1
Q ss_pred cCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHH
Q 008707 471 IGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIV 504 (557)
Q Consensus 471 ~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~evl 504 (557)
.... ..++.+++.+||+.||++|||++|++
T Consensus 254 p~~~----s~~~~dli~~lL~~dp~~R~t~~e~~ 283 (311)
T 4aw0_A 254 PEKF----FPKARDLVEKLLVLDATKRLGCEEME 283 (311)
T ss_dssp CTTC----CHHHHHHHHHHSCSSGGGSTTSGGGT
T ss_pred Cccc----CHHHHHHHHHHccCCHhHCcChHHHc
Confidence 1112 23678999999999999999999874
No 10
>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}
Probab=100.00 E-value=1.1e-50 Score=417.14 Aligned_cols=247 Identities=24% Similarity=0.345 Sum_probs=206.2
Q ss_pred HHhhcccCCCCceEEEEEEEc-CCcEEEEEEccCccchhHHHHHHHHHHHhhcCCCCccceeeEEEecCeeEEEEEecCC
Q 008707 237 NNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCSHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYEYMHN 315 (557)
Q Consensus 237 ~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~lv~e~~~~ 315 (557)
|++.++||+|+||.||+|.+. +|+.||||++........+.+.+|+++|+.++|||||++++++.+++..|+|||||+|
T Consensus 153 y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~iVmEy~~g 232 (423)
T 4fie_A 153 LDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEG 232 (423)
T ss_dssp EEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESTTCSSGGGHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCTT
T ss_pred cEeeeEeccCcCcEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHhCCCCCCCceEEEEEECCEEEEEEeCCCC
Confidence 556788999999999999876 6899999999765555566789999999999999999999999999999999999999
Q ss_pred CChhhhhhccCCCCCcCHHHHHHHHHHHHHHHHHHHcCCCCCeEeeccCCCCEEeCCCCcEEEecccCccccCCCCcccc
Q 008707 316 GTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEEDLTHIS 395 (557)
Q Consensus 316 gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfgla~~~~~~~~~~~ 395 (557)
|+|.++++. ..+++..+..++.||+.||+|||+ ++|+||||||+||||+.+|.+||+|||+|+........ .
T Consensus 233 G~L~~~i~~----~~l~e~~~~~~~~qil~aL~ylH~---~~IiHRDiKp~NILl~~~g~vKl~DFGla~~~~~~~~~-~ 304 (423)
T 4fie_A 233 GALTDIVTH----TRMNEEQIAAVCLAVLQALSVLHA---QGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPR-R 304 (423)
T ss_dssp EEHHHHHHH----SCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSTTTEEECTTCCEEECCCTTCEECCSSCCC-B
T ss_pred CcHHHHHhc----cCCCHHHHHHHHHHHHHHHHHHHH---CCeecccCCHHHEEEcCCCCEEEecCccceECCCCCcc-c
Confidence 999999973 458999999999999999999999 99999999999999999999999999999887554332 3
Q ss_pred ccccCCCCccCCcccCCCCCCcccceehhHHHHHHHHhCCCCCCCCCccccccHHHHHHHHHhcCCccccccccccCCCC
Q 008707 396 SVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPVLIGNVK 475 (557)
Q Consensus 396 ~~~~g~~~y~aPE~l~~~~~s~~~DvwslG~ll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~ 475 (557)
....||+.|||||++.+..|+.++|||||||++|||++|+.||.+.+... . ...+..+....... .
T Consensus 305 ~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~---~----~~~i~~~~~~~~~~-------~ 370 (423)
T 4fie_A 305 KSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLK---A----MKMIRDNLPPRLKN-------L 370 (423)
T ss_dssp CCCEECTTTCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHH---H----HHHHHHSCCCCCSC-------T
T ss_pred cccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHH---H----HHHHHcCCCCCCcc-------c
Confidence 34569999999999999999999999999999999999999997443211 1 12222221111111 1
Q ss_pred HHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 008707 476 IESIWRIAEVAIQCVEQRGFSRPKMQEIVL 505 (557)
Q Consensus 476 ~~~~~~l~~li~~cl~~~P~~RPt~~evl~ 505 (557)
......+.+++.+||..||++|||++|+++
T Consensus 371 ~~~s~~~~dli~~~L~~dP~~R~ta~ell~ 400 (423)
T 4fie_A 371 HKVSPSLKGFLDRLLVRDPAQRATAAELLK 400 (423)
T ss_dssp TSSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred ccCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 112346889999999999999999999976
No 11
>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*
Probab=100.00 E-value=1.4e-51 Score=417.27 Aligned_cols=266 Identities=26% Similarity=0.395 Sum_probs=215.7
Q ss_pred HHHHHHHhhcccCCCCceEEEEEEEcC------CcEEEEEEccCccc-hhHHHHHHHHHHHhhcCC-CCccceeeEEEec
Q 008707 232 LEEATNNFCKKIGKGSFGSVYYGKMKD------GKEVAVKIMADSCS-HRTQQFVTEVALLSRIHH-RNLVPLIGYCEEE 303 (557)
Q Consensus 232 ~~~~~~~~~~~lG~G~~g~Vy~~~~~~------~~~vavK~~~~~~~-~~~~~~~~E~~il~~l~h-~nIv~~~~~~~~~ 303 (557)
+....+++.+.||+|+||.||+|.+.. ++.||||++..... ...+.|.+|+++|.+++| ||||+++|+|...
T Consensus 61 i~~~~~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~~~~~~~~~~~E~~il~~l~hhpnIV~l~g~~~~~ 140 (353)
T 4ase_A 61 FPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKP 140 (353)
T ss_dssp CCGGGEEEEEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECCT
T ss_pred ecHHHeEEeeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEccccChHHHHHHHHHHHHHHHcCCCCcEEEEEEEEEec
Confidence 334456778999999999999998753 36899999876433 345679999999999965 8999999999764
Q ss_pred -CeeEEEEEecCCCChhhhhhccC-------------CCCCcCHHHHHHHHHHHHHHHHHHHcCCCCCeEeeccCCCCEE
Q 008707 304 -HQRILVYEYMHNGTLRDRLHGSV-------------NQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNIL 369 (557)
Q Consensus 304 -~~~~lv~e~~~~gsL~~~l~~~~-------------~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~dlk~~NIl 369 (557)
+..++|||||++|+|.++++... ....+++..+..++.|||+||+|||+ ++|+||||||+|||
T Consensus 141 ~~~~~iV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yLH~---~~iiHRDLK~~NIL 217 (353)
T 4ase_A 141 GGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLAS---RKCIHRDLAARNIL 217 (353)
T ss_dssp TSCCEEEEECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEE
T ss_pred CCEEEEEEEcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHhHhh---CCeecCccCcccee
Confidence 56899999999999999997532 13458999999999999999999999 99999999999999
Q ss_pred eCCCCcEEEecccCccccCCCCc-cccccccCCCCccCCcccCCCCCCcccceehhHHHHHHHHh-CCCCCCCCCccccc
Q 008707 370 LDINMRAKVSDFGLSRQAEEDLT-HISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELIS-GKKPVSVEDFGAEL 447 (557)
Q Consensus 370 l~~~~~~kl~Dfgla~~~~~~~~-~~~~~~~g~~~y~aPE~l~~~~~s~~~DvwslG~ll~ellt-g~~pf~~~~~~~~~ 447 (557)
+++++.+||+|||+|+....... .......||+.|||||++.+..|+.++|||||||++|||+| |+.||.+.....
T Consensus 218 l~~~~~vKi~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~y~~ksDVwS~Gv~l~El~t~G~~Pf~~~~~~~-- 295 (353)
T 4ase_A 218 LSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDE-- 295 (353)
T ss_dssp ECGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSH--
T ss_pred eCCCCCEEECcchhhhhcccCCCceeeccccccccccCHHHHhcCCCCCcccEeehHHHHHHHHhCCCCCCCCCCHHH--
Confidence 99999999999999987654332 23344568999999999999999999999999999999998 999997543221
Q ss_pred cHHHHHHHHHhcCCccccccccccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhhhhhc
Q 008707 448 NIVHWARSMIKKGDVISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKIEK 515 (557)
Q Consensus 448 ~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~evl~~L~~~~~~~~ 515 (557)
.+...+..|...... ...+.++.+++.+||+.||++|||++||++.|+++.+...
T Consensus 296 ----~~~~~i~~g~~~~~p---------~~~~~~~~~li~~c~~~dP~~RPt~~eil~~L~~llq~~~ 350 (353)
T 4ase_A 296 ----EFCRRLKEGTRMRAP---------DYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQANA 350 (353)
T ss_dssp ----HHHHHHHHTCCCCCC---------TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHTC
T ss_pred ----HHHHHHHcCCCCCCC---------ccCCHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHHHHhh
Confidence 123334444332221 1223478899999999999999999999999999887543
No 12
>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00 E-value=2e-51 Score=409.72 Aligned_cols=266 Identities=26% Similarity=0.389 Sum_probs=200.4
Q ss_pred HhhcccCCCCceEEEEEEEcCCcEEEEEEccCccchhHHHHHHHHHHHhhcCCCCccceeeEEEecC----eeEEEEEec
Q 008707 238 NFCKKIGKGSFGSVYYGKMKDGKEVAVKIMADSCSHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEH----QRILVYEYM 313 (557)
Q Consensus 238 ~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~----~~~lv~e~~ 313 (557)
.+.+.||+|+||+||+|.++ |+.||||++.... .....+..|+..+.+++|||||++++++.+++ ..++||||+
T Consensus 6 ~L~~~iG~G~fG~Vy~~~~~-g~~VAvK~l~~~~-~~~~~~e~Ei~~~~~l~HpNIv~l~g~~~~~~~~~~~~~lV~Ey~ 83 (303)
T 3hmm_A 6 VLQESIGKGRFGEVWRGKWR-GEEVAVKIFSSRE-ERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYH 83 (303)
T ss_dssp EEEEEEEECSSSEEEEEEET-TEEEEEEEECGGG-HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEEECC
T ss_pred EEEEEEeeCCCeEEEEEEEC-CEEEEEEEECccc-hhhHHHHHHHHHHhcCCCCCCCcEEEEEEecCCCceEEEEEecCC
Confidence 45688999999999999985 8999999986432 22223344666667889999999999998654 579999999
Q ss_pred CCCChhhhhhccCCCCCcCHHHHHHHHHHHHHHHHHHHcCC-----CCCeEeeccCCCCEEeCCCCcEEEecccCccccC
Q 008707 314 HNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGC-----NPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAE 388 (557)
Q Consensus 314 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~-----~~~ivH~dlk~~NIll~~~~~~kl~Dfgla~~~~ 388 (557)
++|+|.++++. ..+++..+.+++.|+++||+|||+.+ +.+|+||||||+|||++.++.+||+|||+|+...
T Consensus 84 ~~gsL~~~l~~----~~l~~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~IiHRDlKp~NILl~~~~~~Ki~DFGla~~~~ 159 (303)
T 3hmm_A 84 EHGSLFDYLNR----YTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHD 159 (303)
T ss_dssp TTCBHHHHHHH----CCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCCEECSCCCGGGEEECTTSCEEECCCTTCEEEE
T ss_pred CCCcHHHHHHh----CCCCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCEeeccCCcccEEECCCCCEEEEeCCCCcccc
Confidence 99999999974 45899999999999999999999721 2399999999999999999999999999998764
Q ss_pred CCCcc---ccccccCCCCccCCcccCCC------CCCcccceehhHHHHHHHHhCCCCCCCCCccc---------cccHH
Q 008707 389 EDLTH---ISSVARGTVGYLDPEYYGNQ------QLTEKSDVYSFGVVLLELISGKKPVSVEDFGA---------ELNIV 450 (557)
Q Consensus 389 ~~~~~---~~~~~~g~~~y~aPE~l~~~------~~s~~~DvwslG~ll~elltg~~pf~~~~~~~---------~~~~~ 450 (557)
..... ......||+.|+|||++.+. .++.++|||||||++|||+||..||....... .....
T Consensus 160 ~~~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~~~~~~~k~DVwS~Gvvl~El~tg~~~~~~~~~~~~p~~~~~~~~~~~~ 239 (303)
T 3hmm_A 160 SATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVE 239 (303)
T ss_dssp TTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTTTTTSCSSCCHH
T ss_pred CCCCceeeecccccccccccCHHHhcccccccCCccChhHhhhhHHHHHHHHHHCCCCCCccccccccchhcccccchHH
Confidence 43222 12234699999999999764 46789999999999999999988875332211 11122
Q ss_pred HHHHHHHhcCCccccccccccCC-CCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhhhhh
Q 008707 451 HWARSMIKKGDVISIVDPVLIGN-VKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKIE 514 (557)
Q Consensus 451 ~~~~~~~~~~~~~~~~d~~l~~~-~~~~~~~~l~~li~~cl~~~P~~RPt~~evl~~L~~~~~~~ 514 (557)
+ ....+..+. ++|.+... ...+.+..+.+++.+||+.||++||||+||++.|+++.+.+
T Consensus 240 ~-~~~~~~~~~----~rp~~p~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ei~~~L~~l~~~~ 299 (303)
T 3hmm_A 240 E-MRKVVCEQK----LRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQE 299 (303)
T ss_dssp H-HHHHHTTSC----CCCCCCGGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHHHHHC-
T ss_pred H-HHHHHhccc----CCCCCCccccchHHHHHHHHHHHHHcccCHhHCcCHHHHHHHHHHHHHHc
Confidence 2 222222211 12222111 12355668899999999999999999999999999987643
No 13
>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A
Probab=100.00 E-value=1.3e-50 Score=395.16 Aligned_cols=244 Identities=25% Similarity=0.363 Sum_probs=190.4
Q ss_pred HHHhhcccCCCCceEEEEEEEc-CCcEEEEEEccCcc---chhHHHHHHHHHHHhhcCCCCccceeeEEEecCeeEEEEE
Q 008707 236 TNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSC---SHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYE 311 (557)
Q Consensus 236 ~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~lv~e 311 (557)
.|++.+.||+|+||+||+|... +|+.||+|++.+.. ....+.+.+|+++++.++|||||++++++.+++..++|||
T Consensus 14 ~Y~i~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~ivmE 93 (275)
T 3hyh_A 14 NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVIE 93 (275)
T ss_dssp CCEEEEEEEC---CCEEEEECTTTCCEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred CeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEeHHHcCCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEEe
Confidence 3667899999999999999875 68999999986532 2334678999999999999999999999999999999999
Q ss_pred ecCCCChhhhhhccCCCCCcCHHHHHHHHHHHHHHHHHHHcCCCCCeEeeccCCCCEEeCCCCcEEEecccCccccCCCC
Q 008707 312 YMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEEDL 391 (557)
Q Consensus 312 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfgla~~~~~~~ 391 (557)
|+ +|+|.+++.. ...+++..+..++.||+.||+|||+ ++|+||||||+|||++.++.+||+|||+|+......
T Consensus 94 y~-~g~L~~~l~~---~~~l~e~~~~~~~~qi~~al~ylH~---~~IiHRDiKP~NILl~~~~~vkl~DFGla~~~~~~~ 166 (275)
T 3hyh_A 94 YA-GNELFDYIVQ---RDKMSEQEARRFFQQIISAVEYCHR---HKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGN 166 (275)
T ss_dssp CC-CEEHHHHHHH---SCSCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCTTTEEECTTCCEEECCSSCC-------
T ss_pred CC-CCCHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHH---CCcccccCChHHeEECCCCCEEEeecCCCeecCCCC
Confidence 99 7899999874 4679999999999999999999999 999999999999999999999999999998765432
Q ss_pred ccccccccCCCCccCCcccCCCCC-CcccceehhHHHHHHHHhCCCCCCCCCccccccHHHHHHHHHhcCCccccccccc
Q 008707 392 THISSVARGTVGYLDPEYYGNQQL-TEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPVL 470 (557)
Q Consensus 392 ~~~~~~~~g~~~y~aPE~l~~~~~-s~~~DvwslG~ll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l 470 (557)
. .....||+.|+|||++.+..+ +.++||||+||++|+|+||+.||...+.. +. ...+..+... +
T Consensus 167 ~--~~~~~GT~~Y~APE~~~~~~y~~~~~DiwSlGvily~lltg~~PF~~~~~~------~~-~~~i~~~~~~------~ 231 (275)
T 3hyh_A 167 F--LKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIP------VL-FKNISNGVYT------L 231 (275)
T ss_dssp ----------CTTSCHHHHSSSSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH------HH-HHHHHHTCCC------C
T ss_pred c--cCCeeECcccCChhhhcCCCCCCChhhhHHHHHHHHHHHHCCCCCCCCCHH------HH-HHHHHcCCCC------C
Confidence 2 234569999999999998876 57999999999999999999999754321 11 1222233221 1
Q ss_pred cCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 008707 471 IGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 505 (557)
Q Consensus 471 ~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~evl~ 505 (557)
... ....+.+++.+||+.||++|||++|+++
T Consensus 232 p~~----~s~~~~~li~~~L~~dP~~R~s~~eil~ 262 (275)
T 3hyh_A 232 PKF----LSPGAAGLIKRMLIVNPLNRISIHEIMQ 262 (275)
T ss_dssp CTT----SCHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred CCC----CCHHHHHHHHHHccCChhHCcCHHHHHc
Confidence 111 2246789999999999999999999987
No 14
>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*
Probab=100.00 E-value=7.2e-51 Score=402.49 Aligned_cols=241 Identities=26% Similarity=0.331 Sum_probs=192.2
Q ss_pred HHHhhcccCCCCceEEEEEEEc----CCcEEEEEEccCcc--chhHHHHHHHHHHHhhcCCCCccceeeEEEecCeeEEE
Q 008707 236 TNNFCKKIGKGSFGSVYYGKMK----DGKEVAVKIMADSC--SHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILV 309 (557)
Q Consensus 236 ~~~~~~~lG~G~~g~Vy~~~~~----~~~~vavK~~~~~~--~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~lv 309 (557)
.|++.+.||+|+||+||+|+.. +++.||+|++.... ......+.+|++++++++|||||++++++.+++..|+|
T Consensus 25 ~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~iv 104 (304)
T 3ubd_A 25 QFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKLHYAFQTEGKLYLI 104 (304)
T ss_dssp GEEEEEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEEEECC------CCCCCCCCTTEECEEEEEEETTEEEEE
T ss_pred ccEEEEEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcChHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEE
Confidence 4677899999999999999763 47889999986532 22334688899999999999999999999999999999
Q ss_pred EEecCCCChhhhhhccCCCCCcCHHHHHHHHHHHHHHHHHHHcCCCCCeEeeccCCCCEEeCCCCcEEEecccCccccCC
Q 008707 310 YEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEE 389 (557)
Q Consensus 310 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfgla~~~~~ 389 (557)
||||+||+|.+++.. ...+++..+..++.||+.||+|||+ ++|+||||||+|||++.++.+||+|||+|+....
T Consensus 105 mEy~~gg~L~~~l~~---~~~l~e~~~~~~~~qi~~aL~ylH~---~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~ 178 (304)
T 3ubd_A 105 LDFLRGGDLFTRLSK---EVMFTEEDVKFYLAELALALDHLHS---LGIIYRDLKPENILLDEEGHIKLTDFGLSKESID 178 (304)
T ss_dssp ECCCTTCEEHHHHHH---HCCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSSCCGGGEEECTTSCEEEESSEEEEC---
T ss_pred EEcCCCCCHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHH---CCCcCCCCCHHHeEEcCCCCEEecccccceeccC
Confidence 999999999999974 4579999999999999999999999 9999999999999999999999999999987543
Q ss_pred CCccccccccCCCCccCCcccCCCCCCcccceehhHHHHHHHHhCCCCCCCCCccccccHHHHHHHHHhcCCcccccccc
Q 008707 390 DLTHISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPV 469 (557)
Q Consensus 390 ~~~~~~~~~~g~~~y~aPE~l~~~~~s~~~DvwslG~ll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 469 (557)
... ......||+.|||||++.+..|+.++||||+||++|||+||+.||.+.+.. +.. ..+.++...
T Consensus 179 ~~~-~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~~------~~~-~~i~~~~~~------ 244 (304)
T 3ubd_A 179 HEK-KAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRK------ETM-TMILKAKLG------ 244 (304)
T ss_dssp --C-CCCSCCCCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH------HHH-HHHHHCCCC------
T ss_pred CCc-cccccccCcccCCHHHhccCCCCCCCcccchHHHHHHHHhCCCCCCCcCHH------HHH-HHHHcCCCC------
Confidence 322 233456999999999999999999999999999999999999999854322 111 122222211
Q ss_pred ccCCCCHHHHHHHHHHHHHccccCCCCCCCH
Q 008707 470 LIGNVKIESIWRIAEVAIQCVEQRGFSRPKM 500 (557)
Q Consensus 470 l~~~~~~~~~~~l~~li~~cl~~~P~~RPt~ 500 (557)
+ +...+.++.+++.+||+.||++|||+
T Consensus 245 ~----p~~~s~~~~~li~~~L~~dP~~R~ta 271 (304)
T 3ubd_A 245 M----PQFLSPEAQSLLRMLFKRNPANRLGA 271 (304)
T ss_dssp C----CTTSCHHHHHHHHHHTCSSGGGSTTC
T ss_pred C----CCcCCHHHHHHHHHHcccCHHHCCCC
Confidence 1 11123468899999999999999985
No 15
>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*
Probab=100.00 E-value=8.6e-49 Score=389.02 Aligned_cols=248 Identities=23% Similarity=0.358 Sum_probs=187.6
Q ss_pred HHhhcccCCCCceEEEEEEEc-CCcEEEEEEccCcc-chhHHHHHHHHHHHhhcCCCCccceeeEEEecC----------
Q 008707 237 NNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSC-SHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEH---------- 304 (557)
Q Consensus 237 ~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~---------- 304 (557)
|++.+.||+|+||+||+|.++ +|+.||||++.... ....+.+.+|+++|++++|||||++++++.+.+
T Consensus 7 y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~~~~ 86 (299)
T 4g31_A 7 FEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLEKNTTEKLQPSSP 86 (299)
T ss_dssp EEEEEEEEECC--EEEEEEETTTCCEEEEEEEEECSSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEEC----------
T ss_pred CEEeeEEecCCCeEEEEEEECCCCCEEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEecCccccccccCC
Confidence 566899999999999999876 68999999986433 334567999999999999999999999987544
Q ss_pred --eeEEEEEecCCCChhhhhhccCCCCCcCHHHHHHHHHHHHHHHHHHHcCCCCCeEeeccCCCCEEeCCCCcEEEeccc
Q 008707 305 --QRILVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFG 382 (557)
Q Consensus 305 --~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg 382 (557)
..|+|||||++|+|.+++.........++..++.++.||++||+|||+ ++|+||||||+|||++.++.+||+|||
T Consensus 87 ~~~l~ivmE~~~gg~L~~~l~~~~~~~~~~~~~~~~i~~qi~~al~ylH~---~~IiHRDlKp~NILl~~~~~vKl~DFG 163 (299)
T 4g31_A 87 KVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAEAVEFLHS---KGLMHRDLKPSNIFFTMDDVVKVGDFG 163 (299)
T ss_dssp CEEEEEEEECCCSCCHHHHHHTCCSGGGSCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTCCEEECCCC
T ss_pred CcEEEEEEecCCCCcHHHHHHhcCCCChhHHHHHHHHHHHHHHHHHHHHH---CcCccccCcHHHeEECCCCcEEEccCc
Confidence 368999999999999999854333345667788999999999999999 999999999999999999999999999
Q ss_pred CccccCCCCcc-----------ccccccCCCCccCCcccCCCCCCcccceehhHHHHHHHHhCCCCCCCCCccccccHHH
Q 008707 383 LSRQAEEDLTH-----------ISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVH 451 (557)
Q Consensus 383 la~~~~~~~~~-----------~~~~~~g~~~y~aPE~l~~~~~s~~~DvwslG~ll~elltg~~pf~~~~~~~~~~~~~ 451 (557)
+|+........ ......||+.|||||++.+..|+.++|||||||++|||++ ||.... ....
T Consensus 164 la~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyell~---Pf~~~~-----~~~~ 235 (299)
T 4g31_A 164 LVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLY---PFSTQM-----ERVR 235 (299)
T ss_dssp CC--------------------------CCCTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHS---CCSSHH-----HHHH
T ss_pred cceecCCCccccccccccccccccCCcccCccccCHHHHcCCCCCCHHHHHHHHHHHHHHcc---CCCCcc-----HHHH
Confidence 99876543221 1123469999999999999999999999999999999996 775211 1111
Q ss_pred HHHHHHhcCCccccccccccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 008707 452 WARSMIKKGDVISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 505 (557)
Q Consensus 452 ~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~evl~ 505 (557)
.. ..+........ .......+.+++.+||+.||++|||+.|+++
T Consensus 236 ~~-~~~~~~~~p~~---------~~~~~~~~~~li~~~L~~dP~~Rps~~eil~ 279 (299)
T 4g31_A 236 TL-TDVRNLKFPPL---------FTQKYPCEYVMVQDMLSPSPMERPEAINIIE 279 (299)
T ss_dssp HH-HHHHTTCCCHH---------HHHHCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred HH-HHHhcCCCCCC---------CcccCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 11 11222221111 1122235678999999999999999999976
No 16
>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*
Probab=100.00 E-value=8e-46 Score=373.65 Aligned_cols=276 Identities=41% Similarity=0.718 Sum_probs=242.1
Q ss_pred HHhhcccCCCCceEEEEEEEcCCcEEEEEEccCccchhHHHHHHHHHHHhhcCCCCccceeeEEEecCeeEEEEEecCCC
Q 008707 237 NNFCKKIGKGSFGSVYYGKMKDGKEVAVKIMADSCSHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYEYMHNG 316 (557)
Q Consensus 237 ~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~lv~e~~~~g 316 (557)
|++.+.||+|+||.||+|.+++++.||+|++........+.+.+|+++++.++||||+++++++.+.+..++||||+++|
T Consensus 41 y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~ 120 (321)
T 2qkw_B 41 FDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCDERNEMILIYKYMENG 120 (321)
T ss_dssp CSCCCCSCBCSSSEEEEEECTTCCEEEEEECCSCCSSHHHHHHHHHHGGGSCCCTTBCCEEEECCCTTCCEEEEECCTTC
T ss_pred cCccceeecCCCeeEEEEEECCCCEEEEEEecccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCeEEEEEEcCCCC
Confidence 34568899999999999998889999999987766666778999999999999999999999999999999999999999
Q ss_pred ChhhhhhccC-CCCCcCHHHHHHHHHHHHHHHHHHHcCCCCCeEeeccCCCCEEeCCCCcEEEecccCccccCCCC-ccc
Q 008707 317 TLRDRLHGSV-NQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEEDL-THI 394 (557)
Q Consensus 317 sL~~~l~~~~-~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfgla~~~~~~~-~~~ 394 (557)
+|.+++.... ....+++..++.++.|++.||+|||+ ++++||||||+||+++.++.+||+|||++....... ...
T Consensus 121 ~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~---~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~ 197 (321)
T 2qkw_B 121 NLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHT---RAIIHRDVKSINILLDENFVPKITDFGISKKGTELDQTHL 197 (321)
T ss_dssp BTGGGSSSSCCCSCCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCSTTEEECTTCCEEECCCTTCEECSSSSCCCC
T ss_pred cHHHHHhccCCCccccCHHHHHHHHHHHHHHHHHhcC---CCeecCCCCHHHEEECCCCCEEEeeccccccccccccccc
Confidence 9999997542 23468999999999999999999998 999999999999999999999999999998654322 222
Q ss_pred cccccCCCCccCCcccCCCCCCcccceehhHHHHHHHHhCCCCCCCCCccccccHHHHHHHHHhcCCccccccccccCCC
Q 008707 395 SSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPVLIGNV 474 (557)
Q Consensus 395 ~~~~~g~~~y~aPE~l~~~~~s~~~DvwslG~ll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~ 474 (557)
.....||+.|+|||.+.+..++.++||||||+++|||++|+.||.............|.......+.....+++.+....
T Consensus 198 ~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 277 (321)
T 2qkw_B 198 STVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQLEQIVDPNLADKI 277 (321)
T ss_dssp BCCCEEETTTCCHHHHHHCBCCTHHHHHHHHHHHHHHHHCCTTCSCSSSSSCCCHHHHTHHHHTTTCCCSSSSSSCTTCS
T ss_pred ccccCCCccccCHHHhcCCCCCcccchHhHHHHHHHHHhCCCcccccCcHHHHHHHHHhhhccccccHHHhcChhhcccc
Confidence 23345899999999998889999999999999999999999999866666667778887777777888888888887778
Q ss_pred CHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhhhhhc
Q 008707 475 KIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKIEK 515 (557)
Q Consensus 475 ~~~~~~~l~~li~~cl~~~P~~RPt~~evl~~L~~~~~~~~ 515 (557)
....+..+.+++.+||+.||++|||++||++.|+.+.+...
T Consensus 278 ~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~l~~~~ 318 (321)
T 2qkw_B 278 RPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLEYALRLQE 318 (321)
T ss_dssp CHHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHSSC
T ss_pred CHHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHhhccc
Confidence 88889999999999999999999999999999999987543
No 17
>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}
Probab=100.00 E-value=1.8e-46 Score=386.33 Aligned_cols=260 Identities=19% Similarity=0.318 Sum_probs=199.1
Q ss_pred HHHhhcccCCCCceEEEEEEEc-CCcEEEEEEccCcc--chhHHHHHHHHHHHhhcCCCCccceeeEEEe------cCee
Q 008707 236 TNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSC--SHRTQQFVTEVALLSRIHHRNLVPLIGYCEE------EHQR 306 (557)
Q Consensus 236 ~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~------~~~~ 306 (557)
.|++.+.||+|+||+||+|.+. +|+.||||++.... ....+.+.+|+++|+.++|||||++++++.. .+..
T Consensus 55 ~Y~~~~~lG~G~fG~V~~a~~~~t~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~~~~ 134 (398)
T 4b99_A 55 EYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEFKSV 134 (398)
T ss_dssp SEEEEEEEEECSSCEEEEEEETTTCCEEEEEEETTTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSSCTTTCCCE
T ss_pred CeEEEEEEecccCeEEEEEEECCCCCEEEEEEECccccchHHHHHHHHHHHHHHhcCCCCcceEeeeeecccccccCCEE
Confidence 3567899999999999999875 69999999996542 2345678899999999999999999998764 3578
Q ss_pred EEEEEecCCCChhhhhhccCCCCCcCHHHHHHHHHHHHHHHHHHHcCCCCCeEeeccCCCCEEeCCCCcEEEecccCccc
Q 008707 307 ILVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQ 386 (557)
Q Consensus 307 ~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfgla~~ 386 (557)
|+|||||+ |+|.+++. ....+++..+..++.||+.||+|||+ +||+||||||+|||++.++.+||+|||+|+.
T Consensus 135 ~ivmE~~~-g~L~~~i~---~~~~l~~~~~~~~~~qil~al~ylH~---~~iiHRDlKP~NIl~~~~~~~Ki~DFGla~~ 207 (398)
T 4b99_A 135 YVVLDLME-SDLHQIIH---SSQPLTLEHVRYFLYQLLRGLKYMHS---AQVIHRDLKPSNLLVNENCELKIGDFGMARG 207 (398)
T ss_dssp EEEEECCS-EEHHHHHT---SSSCCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCCGGGEEECTTCCEEECCCTTCBC
T ss_pred EEEEeCCC-CCHHHHHH---hcCCCCHHHHHHHHHHHHHHHHHHHH---CcCcCCCcCccccccCCCCCEEEeecceeee
Confidence 99999995 68999987 35679999999999999999999999 9999999999999999999999999999987
Q ss_pred cCCCC---ccccccccCCCCccCCcccCCC-CCCcccceehhHHHHHHHHhCCCCCCCCCccccccHHHHHHHHHhcCCc
Q 008707 387 AEEDL---THISSVARGTVGYLDPEYYGNQ-QLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDV 462 (557)
Q Consensus 387 ~~~~~---~~~~~~~~g~~~y~aPE~l~~~-~~s~~~DvwslG~ll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 462 (557)
..... ........||+.|+|||++.+. .++.++||||+||++|||++|+.||.+.+..+.. ..+......-..
T Consensus 208 ~~~~~~~~~~~~~~~~GT~~Y~APEv~~~~~~~~~~~DiWSlG~il~ell~G~~pF~g~~~~~~l---~~I~~~~g~p~~ 284 (398)
T 4b99_A 208 LCTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQL---QLIMMVLGTPSP 284 (398)
T ss_dssp C-------CCCCCSSCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTSCSSCCSSHHHHH---HHHHHHHCCCCG
T ss_pred cccCccccccccccceeChHhcCHHHhcCCCCCCChhheehhHHHHHHHHHCCCCCCCCCHHHHH---HHHHHhcCCCCh
Confidence 64322 1223346799999999998775 5689999999999999999999999865432211 111111111000
Q ss_pred cccccc-----------ccc--CCCC-----HHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 008707 463 ISIVDP-----------VLI--GNVK-----IESIWRIAEVAIQCVEQRGFSRPKMQEIVLA 506 (557)
Q Consensus 463 ~~~~d~-----------~l~--~~~~-----~~~~~~l~~li~~cl~~~P~~RPt~~evl~~ 506 (557)
..... .+. ...+ ......+.+++.+||..||++|||++|+++.
T Consensus 285 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~H 345 (398)
T 4b99_A 285 -AVIQAVGAERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAAAALRH 345 (398)
T ss_dssp -GGTC-----CHHHHHHSSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSSTTTSCCHHHHTTS
T ss_pred -HHhhhhhhhhhhhhhhcCCCcCCCCHHHhCCCCCHHHHHHHHHHCcCChhHCcCHHHHhcC
Confidence 00000 000 0000 0112367899999999999999999999873
No 18
>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*
Probab=100.00 E-value=1.1e-45 Score=373.23 Aligned_cols=287 Identities=39% Similarity=0.696 Sum_probs=240.1
Q ss_pred CChhHHHHHH--HHhhcccCCCCceEEEEEEEcCCcEEEEEEccCccc-hhHHHHHHHHHHHhhcCCCCccceeeEEEec
Q 008707 227 IPLPELEEAT--NNFCKKIGKGSFGSVYYGKMKDGKEVAVKIMADSCS-HRTQQFVTEVALLSRIHHRNLVPLIGYCEEE 303 (557)
Q Consensus 227 ~~~~~~~~~~--~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~ 303 (557)
++..++.... |++.+.||+|+||.||+|...+++.||+|++..... .....+.+|+++++.++||||+++++++.+.
T Consensus 20 ~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~ 99 (326)
T 3uim_A 20 FSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTP 99 (326)
T ss_dssp CCTHHHHTTTTSSCSTTEEECCSSSEEEEECCSSSCCEEEEECCC-----CCCHHHHHHHGGGTCCCTTBCCCCEEECCS
T ss_pred ecHHHHHHHhhccccceeEecCCCcEEEEEEecCCCEEEEEEeccccCchHHHHHHHHHHHHHhccCCCccceEEEEecC
Confidence 3445555443 344789999999999999988899999999875432 2234688999999999999999999999999
Q ss_pred CeeEEEEEecCCCChhhhhhccC-CCCCcCHHHHHHHHHHHHHHHHHHHcCCCCCeEeeccCCCCEEeCCCCcEEEeccc
Q 008707 304 HQRILVYEYMHNGTLRDRLHGSV-NQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFG 382 (557)
Q Consensus 304 ~~~~lv~e~~~~gsL~~~l~~~~-~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg 382 (557)
+..++||||+++|+|.+++.... ....+++..+..++.|++.||+|||+.+..+++||||||+||+++.++.+||+|||
T Consensus 100 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg 179 (326)
T 3uim_A 100 TERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFG 179 (326)
T ss_dssp SCCEEEEECCTTCBHHHHHHCCSTTCCCCCHHHHHHHHHHHHHHHHHHHHSSSSCEECCCCSGGGEEECTTCCEEECCCS
T ss_pred CceEEEEEeccCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCchhhEEECCCCCEEeccCc
Confidence 99999999999999999998643 33458999999999999999999998212299999999999999999999999999
Q ss_pred CccccCCCCccccccccCCCCccCCcccCCCCCCcccceehhHHHHHHHHhCCCCCCCCCc--cccccHHHHHHHHHhcC
Q 008707 383 LSRQAEEDLTHISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDF--GAELNIVHWARSMIKKG 460 (557)
Q Consensus 383 la~~~~~~~~~~~~~~~g~~~y~aPE~l~~~~~s~~~DvwslG~ll~elltg~~pf~~~~~--~~~~~~~~~~~~~~~~~ 460 (557)
++...............||+.|+|||.+.+..++.++||||||+++|+|++|+.||..... ........|+.......
T Consensus 180 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 259 (326)
T 3uim_A 180 LAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEK 259 (326)
T ss_dssp SCEECCSSSSCEECCCCSCGGGCCHHHHHHSEECHHHHHHHHHHHHHHHHHCCCSBCHHHHTTTSCSBHHHHHTTTTSSC
T ss_pred cccccCcccccccccccCCcCccCHHHhccCCCCccccchhHHHHHHHHHhCCCcccccccccccchhHHHHHHHHhhch
Confidence 9987765544444555699999999999888899999999999999999999999963322 23455677777777777
Q ss_pred CccccccccccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhhhh
Q 008707 461 DVISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKI 513 (557)
Q Consensus 461 ~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~evl~~L~~~~~~ 513 (557)
......+..+........+..+.+++.+||+.||++|||++||++.|+...-.
T Consensus 260 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~~~~~ 312 (326)
T 3uim_A 260 KLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEGDGLA 312 (326)
T ss_dssp CSTTSSCTTCTTSCCHHHHHHHHHHHHHHTCSCGGGSCCHHHHHHHHHTSSCS
T ss_pred hhhhhcChhhccccCHHHHHHHHHHHHHHhCcCCccCCCHHHHHHHhcCcchh
Confidence 77788888888888889999999999999999999999999999999875443
No 19
>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*
Probab=100.00 E-value=2.8e-45 Score=373.46 Aligned_cols=195 Identities=25% Similarity=0.413 Sum_probs=166.8
Q ss_pred HHHhhcccCCCCceEEEEEEEc----CCcEEEEEEccCccchhHHHHHHHHHHHhhc-CCCCccceeeEEEecCeeEEEE
Q 008707 236 TNNFCKKIGKGSFGSVYYGKMK----DGKEVAVKIMADSCSHRTQQFVTEVALLSRI-HHRNLVPLIGYCEEEHQRILVY 310 (557)
Q Consensus 236 ~~~~~~~lG~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~~~~~~~~E~~il~~l-~h~nIv~~~~~~~~~~~~~lv~ 310 (557)
.|++.+.||+|+||+||+|..+ .++.||+|++.... ...++.+|+++++.+ +||||+++++++.+.+..++||
T Consensus 22 ~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~--~~~~~~~E~~~l~~~~~h~nIv~l~~~~~~~~~~~lvm 99 (361)
T 4f9c_A 22 VFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTS--HPIRIAAELQCLTVAGGQDNVMGVKYCFRKNDHVVIAM 99 (361)
T ss_dssp TCEEEEEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTTS--CHHHHHHHHHHHHHTCSBTTBCCCSEEEEETTEEEEEE
T ss_pred cEEEEEEEecccCcEEEEEEEcccCCCCCEEEEEEEcccc--CHHHHHHHHHHHHHhcCCCCCceEEEEEEECCEEEEEE
Confidence 3667889999999999999764 46789999886542 345678999999998 6999999999999999999999
Q ss_pred EecCCCChhhhhhccCCCCCcCHHHHHHHHHHHHHHHHHHHcCCCCCeEeeccCCCCEEeCCC-CcEEEecccCccccCC
Q 008707 311 EYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDIN-MRAKVSDFGLSRQAEE 389 (557)
Q Consensus 311 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~dlk~~NIll~~~-~~~kl~Dfgla~~~~~ 389 (557)
||+++|+|.+++. .+++..+..++.||+.||+|||+ +||+||||||+|||++.+ +.+||+|||+|+...+
T Consensus 100 E~~~g~~L~~~~~------~l~~~~~~~~~~qll~al~ylH~---~gIiHRDiKPeNiLl~~~~~~~kl~DFGla~~~~~ 170 (361)
T 4f9c_A 100 PYLEHESFLDILN------SLSFQEVREYMLNLFKALKRIHQ---FGIVHRDVKPSNFLYNRRLKKYALVDFGLAQGTHD 170 (361)
T ss_dssp ECCCCCCHHHHHT------TCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEEETTTTEEEECCCTTCEECTT
T ss_pred eCCCcccHHHHHc------CCCHHHHHHHHHHHHHHHHHHHH---CCeEeCcCCHHHeEEeCCCCeEEECcCCCCcccCC
Confidence 9999999999984 37899999999999999999999 999999999999999876 7999999999986543
Q ss_pred CCcc---------------------------ccccccCCCCccCCcccCCC-CCCcccceehhHHHHHHHHhCCCCCCCC
Q 008707 390 DLTH---------------------------ISSVARGTVGYLDPEYYGNQ-QLTEKSDVYSFGVVLLELISGKKPVSVE 441 (557)
Q Consensus 390 ~~~~---------------------------~~~~~~g~~~y~aPE~l~~~-~~s~~~DvwslG~ll~elltg~~pf~~~ 441 (557)
.... ......||+.|+|||++.+. .|+.++||||+||++|||+||+.||...
T Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~y~~~~DiWSlG~il~ell~G~~Pf~~~ 250 (361)
T 4f9c_A 171 TKIELLKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLLSGRYPFYKA 250 (361)
T ss_dssp CSCGGGGGC--------------------------CCCCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTCSSSSCC
T ss_pred ccccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCCccchhhhHHHHHHHHHCCCCCCCC
Confidence 2211 11234699999999999775 5899999999999999999999999643
No 20
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A
Probab=100.00 E-value=4e-45 Score=394.39 Aligned_cols=250 Identities=21% Similarity=0.332 Sum_probs=207.3
Q ss_pred HHHhhcccCCCCceEEEEEEEc-CCcEEEEEEccCccchhHHHHHHHHHHHhhcCCCCccceeeEEEecCeeEEEEEecC
Q 008707 236 TNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCSHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYEYMH 314 (557)
Q Consensus 236 ~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~lv~e~~~ 314 (557)
.|++.+.||+|+||.||+|..+ +|+.||+|++........+.+.+|+++|+.++|||||+++++|.+++..++|||||+
T Consensus 158 ~Y~i~~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iv~E~~~ 237 (573)
T 3uto_A 158 HYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFMS 237 (573)
T ss_dssp TEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHHHTCCTTBCCEEEEEECSSEEEEEEECCC
T ss_pred ccEEEEEEeeccCeEEEEEEECCCCCEEEEEEEeccchhhHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeecC
Confidence 4667899999999999999876 689999999977656667789999999999999999999999999999999999999
Q ss_pred CCChhhhhhccCCCCCcCHHHHHHHHHHHHHHHHHHHcCCCCCeEeeccCCCCEEeCCC--CcEEEecccCccccCCCCc
Q 008707 315 NGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDIN--MRAKVSDFGLSRQAEEDLT 392 (557)
Q Consensus 315 ~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~dlk~~NIll~~~--~~~kl~Dfgla~~~~~~~~ 392 (557)
||+|.+++.. ....+++..+..++.||+.||+|||+ ++|+||||||+|||++.+ +.+||+|||+|+.......
T Consensus 238 gg~L~~~i~~--~~~~l~e~~~~~~~~qi~~al~ylH~---~~iiHRDlKp~Nill~~~~~~~vKl~DFG~a~~~~~~~~ 312 (573)
T 3uto_A 238 GGELFEKVAD--EHNKMSEDEAVEYMRQVCKGLCHMHE---NNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQS 312 (573)
T ss_dssp CCBHHHHHTC--TTSCEEHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEESSSSCCCEEECCCSSCEECCTTSE
T ss_pred CCcHHHHHHH--hCCCCCHHHHHHHHHHHHHHHHHHHH---CCeeeccCChhhccccCCCCCCEEEeeccceeEccCCCc
Confidence 9999999864 24569999999999999999999999 999999999999999854 8899999999998754432
Q ss_pred cccccccCCCCccCCcccCCCCCCcccceehhHHHHHHHHhCCCCCCCCCccccccHHHHHHHHHhcCCccccccccccC
Q 008707 393 HISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPVLIG 472 (557)
Q Consensus 393 ~~~~~~~g~~~y~aPE~l~~~~~s~~~DvwslG~ll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~ 472 (557)
.....||+.|+|||++.+..|+.++||||+||++|||++|+.||.+.+... . ...+..+... +......
T Consensus 313 --~~~~~GT~~y~APEv~~~~~y~~~~DiWSlGvilyeml~G~~Pf~~~~~~~------~-~~~i~~~~~~--~~~~~~~ 381 (573)
T 3uto_A 313 --VKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDE------T-LRNVKSCDWN--MDDSAFS 381 (573)
T ss_dssp --EEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHH------H-HHHHHTTCCC--CCSGGGT
T ss_pred --eeeeEECccccCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHH------H-HHHHHhCCCC--CCccccc
Confidence 234469999999999999999999999999999999999999998543321 1 1122222211 1111111
Q ss_pred CCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 008707 473 NVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 505 (557)
Q Consensus 473 ~~~~~~~~~l~~li~~cl~~~P~~RPt~~evl~ 505 (557)
.. ...+.+++.+||..||++|||++|+++
T Consensus 382 ~~----s~~~~dli~~~L~~dp~~R~t~~e~l~ 410 (573)
T 3uto_A 382 GI----SEDGKDFIRKLLLADPNTRMTIHQALE 410 (573)
T ss_dssp TS----CHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred CC----CHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 22 236789999999999999999999987
No 21
>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A
Probab=100.00 E-value=8.7e-45 Score=389.58 Aligned_cols=246 Identities=22% Similarity=0.274 Sum_probs=196.4
Q ss_pred HHhhcccCCCCceEEEEEEEc-CCcEEEEEEccCcc---chhHHHHHHH---HHHHhhcCCCCccceeeEEEecCeeEEE
Q 008707 237 NNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSC---SHRTQQFVTE---VALLSRIHHRNLVPLIGYCEEEHQRILV 309 (557)
Q Consensus 237 ~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E---~~il~~l~h~nIv~~~~~~~~~~~~~lv 309 (557)
|++.+.||+|+||.||+|..+ +|+.||||++.+.. ......+.+| +.+++.++|||||+++++|.+.+..|+|
T Consensus 191 f~i~k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~~HP~IV~l~~~f~~~~~lylV 270 (689)
T 3v5w_A 191 FSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFI 270 (689)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSSEEEEE
T ss_pred eEEEEEEecccCeEEEEEEECCCCCEEEEEEEeHHHcchhhhHHHHHHHHHHHHHHhhCCCCCEeEEEEEEEECCEEEEE
Confidence 445688999999999999876 58999999986431 1122233344 5666777899999999999999999999
Q ss_pred EEecCCCChhhhhhccCCCCCcCHHHHHHHHHHHHHHHHHHHcCCCCCeEeeccCCCCEEeCCCCcEEEecccCccccCC
Q 008707 310 YEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEE 389 (557)
Q Consensus 310 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfgla~~~~~ 389 (557)
|||++||+|.+++.. ...+++..+..++.||+.||+|||+ +||+||||||+|||++.+|.+||+|||+|+....
T Consensus 271 mEy~~GGdL~~~l~~---~~~l~E~~a~~y~~qIl~aL~yLH~---~gIiHRDLKPeNILld~~G~vKL~DFGlA~~~~~ 344 (689)
T 3v5w_A 271 LDLMNGGDLHYHLSQ---HGVFSEADMRFYAAEIILGLEHMHN---RFVVYRDLKPANILLDEHGHVRISDLGLACDFSK 344 (689)
T ss_dssp ECCCCSCBHHHHHHH---HCCCCHHHHHHHHHHHHHHHHHHHT---TTEECCCCSGGGEEECTTSCEEECCCTTCEECSS
T ss_pred EecCCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHH---CCccccCCchHHeEEeCCCCEEecccceeeecCC
Confidence 999999999999974 4569999999999999999999998 9999999999999999999999999999987654
Q ss_pred CCccccccccCCCCccCCcccC-CCCCCcccceehhHHHHHHHHhCCCCCCCCCccccccHHHHHHHHHhcCCccccccc
Q 008707 390 DLTHISSVARGTVGYLDPEYYG-NQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDP 468 (557)
Q Consensus 390 ~~~~~~~~~~g~~~y~aPE~l~-~~~~s~~~DvwslG~ll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 468 (557)
.. ....+||+.|||||++. +..|+.++|+||+||++|||++|+.||.+....+.. + +...+......
T Consensus 345 ~~---~~t~~GTp~YmAPEvl~~~~~y~~~vDiWSLGvilYEmLtG~~PF~~~~~~~~~---~-i~~~i~~~~~~----- 412 (689)
T 3v5w_A 345 KK---PHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKH---E-IDRMTLTMAVE----- 412 (689)
T ss_dssp CC---CCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCTTCGGGCCCHH---H-HHHHHHHCCCC-----
T ss_pred CC---CCCccCCcCccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHH---H-HHHhhcCCCCC-----
Confidence 32 23457999999999996 457999999999999999999999999754332221 1 11122222110
Q ss_pred cccCCCCHHHHHHHHHHHHHccccCCCCCCC-----HHHHHH
Q 008707 469 VLIGNVKIESIWRIAEVAIQCVEQRGFSRPK-----MQEIVL 505 (557)
Q Consensus 469 ~l~~~~~~~~~~~l~~li~~cl~~~P~~RPt-----~~evl~ 505 (557)
++.....++.+++.+||+.||.+|++ ++||++
T Consensus 413 -----~p~~~S~~a~dLI~~lL~~dP~~Rl~~~~~ga~ei~~ 449 (689)
T 3v5w_A 413 -----LPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKE 449 (689)
T ss_dssp -----CCTTSCHHHHHHHHHHTCSCGGGCTTCSSSTHHHHTT
T ss_pred -----CCccCCHHHHHHHHHHccCCHhHCCCCCCCCHHHHhc
Confidence 11112336789999999999999998 678765
No 22
>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}
Probab=100.00 E-value=3.9e-44 Score=359.45 Aligned_cols=260 Identities=25% Similarity=0.386 Sum_probs=213.5
Q ss_pred HHHHhhcccCCCCceEEEEEEEc-CCcEEEEEEccCccchhHHHHHHHHHHHhhcCCCCccceeeEEEecCeeEEEEEec
Q 008707 235 ATNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCSHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYEYM 313 (557)
Q Consensus 235 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~lv~e~~ 313 (557)
..|.+.+.||+|+||.||+|.+. +++.||+|++........+.+.+|+++++.++||||+++++++.+++..++||||+
T Consensus 10 ~~~~~~~~lG~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~ 89 (310)
T 3s95_A 10 SDLIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDKRLNFITEYI 89 (310)
T ss_dssp GGEEEEEEEECCSSEEEEEEEETTTCCEEEEEEESCCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred hHeeccceecCCCCEEEEEEEECCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCcCcccEEEEEecCCeeEEEEEec
Confidence 34556789999999999999876 58999999987666667788999999999999999999999999999999999999
Q ss_pred CCCChhhhhhccCCCCCcCHHHHHHHHHHHHHHHHHHHcCCCCCeEeeccCCCCEEeCCCCcEEEecccCccccCCCCcc
Q 008707 314 HNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEEDLTH 393 (557)
Q Consensus 314 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfgla~~~~~~~~~ 393 (557)
++|+|.+++... ...+++..+..++.|+++||+|||+ .+++||||||+||+++.++.+||+|||++.........
T Consensus 90 ~~~~L~~~l~~~--~~~~~~~~~~~i~~qi~~al~~lH~---~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~ 164 (310)
T 3s95_A 90 KGGTLRGIIKSM--DSQYPWSQRVSFAKDIASGMAYLHS---MNIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQ 164 (310)
T ss_dssp TTCBHHHHHHHC--CTTSCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSTTSEEECTTSCEEECCCTTCEECC-----
T ss_pred CCCcHHHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHHh---CCccCCCCCcCeEEECCCCCEEEeecccceeccccccc
Confidence 999999999753 4668999999999999999999998 99999999999999999999999999999876443221
Q ss_pred c-------------cccccCCCCccCCcccCCCCCCcccceehhHHHHHHHHhCCCCCCCCCcccc---ccHHHHHHHHH
Q 008707 394 I-------------SSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAE---LNIVHWARSMI 457 (557)
Q Consensus 394 ~-------------~~~~~g~~~y~aPE~l~~~~~s~~~DvwslG~ll~elltg~~pf~~~~~~~~---~~~~~~~~~~~ 457 (557)
. .....||+.|+|||.+.+..++.++||||||+++|||++|..||........ ..........
T Consensus 165 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~- 243 (310)
T 3s95_A 165 PEGLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRVNADPDYLPRTMDFGLNVRGFLDRY- 243 (310)
T ss_dssp ---------------CCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHTCCSSTTTSCBCTTSSBCHHHHHHHT-
T ss_pred ccccccccccccccccccCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHhcCCCCCcchhhhHHHHhhhhhcccccc-
Confidence 1 1134689999999999999999999999999999999999999874433211 1111111110
Q ss_pred hcCCccccccccccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhhhhhcC
Q 008707 458 KKGDVISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKIEKG 516 (557)
Q Consensus 458 ~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~evl~~L~~~~~~~~~ 516 (557)
. +...+..+.+++.+||+.||++|||++||++.|+++......
T Consensus 244 ------------~----~~~~~~~l~~li~~~l~~dP~~Rps~~~l~~~L~~l~~~~~~ 286 (310)
T 3s95_A 244 ------------C----PPNCPPSFFPITVRCCDLDPEKRPSFVKLEHWLETLRMHLAG 286 (310)
T ss_dssp ------------C----CTTCCTTHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHHH
T ss_pred ------------C----CCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHhccC
Confidence 0 111123678999999999999999999999999999876543
No 23
>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*
Probab=100.00 E-value=1.2e-43 Score=355.76 Aligned_cols=261 Identities=34% Similarity=0.508 Sum_probs=202.2
Q ss_pred HHHHhhcccCCCCceEEEEEEEcCCcEEEEEEccCcc--chhHHHHHHHHHHHhhcCCCCccceeeEEEecCeeEEEEEe
Q 008707 235 ATNNFCKKIGKGSFGSVYYGKMKDGKEVAVKIMADSC--SHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYEY 312 (557)
Q Consensus 235 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~lv~e~ 312 (557)
..|++.+.||+|+||.||+|.+. |+.||+|++.... ....+.+.+|++++++++||||+++++++.+.+..++||||
T Consensus 37 ~~y~i~~~lG~G~~g~V~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~ 115 (309)
T 3p86_A 37 CDLNIKEKIGAGSFGTVHRAEWH-GSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIVTEY 115 (309)
T ss_dssp GGEEEEEEEEECSSEEEEEEEET-TEEEEEEEECCCCCSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTCCEEEEEC
T ss_pred hHceeeeEeecCCCeEEEEEEEC-CCcEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCceEEEEec
Confidence 44567899999999999999874 8899999986543 33456789999999999999999999999999999999999
Q ss_pred cCCCChhhhhhccCCCCCcCHHHHHHHHHHHHHHHHHHHcCCCCC--eEeeccCCCCEEeCCCCcEEEecccCccccCCC
Q 008707 313 MHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPG--IIHRDVKSSNILLDINMRAKVSDFGLSRQAEED 390 (557)
Q Consensus 313 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~--ivH~dlk~~NIll~~~~~~kl~Dfgla~~~~~~ 390 (557)
+++|+|.+++........+++..++.++.|++.||+|||+ .+ |+||||||+||+++.++.+||+|||++......
T Consensus 116 ~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~---~~~~ivH~Dikp~NIll~~~~~~kL~Dfg~a~~~~~~ 192 (309)
T 3p86_A 116 LSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHN---RNPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKAST 192 (309)
T ss_dssp CTTCBHHHHHHSTTHHHHSCHHHHHHHHHHHHHHHHHHHT---SSSCCCCTTCCGGGEEECTTCCEEECCCC--------
T ss_pred CCCCcHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHc---CCCCEECCCCChhhEEEeCCCcEEECCCCCCcccccc
Confidence 9999999999853222348999999999999999999998 88 999999999999999999999999999765433
Q ss_pred CccccccccCCCCccCCcccCCCCCCcccceehhHHHHHHHHhCCCCCCCCCccccccHHHHHHHHHhcCCccccccccc
Q 008707 391 LTHISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPVL 470 (557)
Q Consensus 391 ~~~~~~~~~g~~~y~aPE~l~~~~~s~~~DvwslG~ll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l 470 (557)
.. ......||+.|+|||.+.+..++.++||||||+++|+|++|+.||...+... ............
T Consensus 193 ~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~Pf~~~~~~~------~~~~~~~~~~~~------- 258 (309)
T 3p86_A 193 FL-SSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNPAQ------VVAAVGFKCKRL------- 258 (309)
T ss_dssp ----------CCTTSCHHHHTTCCCCTTHHHHHHHHHHHHHHHCCCTTTTSCHHH------HHHHHHHSCCCC-------
T ss_pred cc-ccccCCCCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH------HHHHHHhcCCCC-------
Confidence 22 1233458999999999999999999999999999999999999997443211 111111111111
Q ss_pred cCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhhhhhc
Q 008707 471 IGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKIEK 515 (557)
Q Consensus 471 ~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~evl~~L~~~~~~~~ 515 (557)
..+...+..+.+++.+||+.+|++|||++||++.|+.+.+...
T Consensus 259 --~~~~~~~~~l~~li~~~l~~dP~~Rps~~~ll~~L~~~~~~~~ 301 (309)
T 3p86_A 259 --EIPRNLNPQVAAIIEGCWTNEPWKRPSFATIMDLLRPLIKSAV 301 (309)
T ss_dssp --CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHC---
T ss_pred --CCCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHhCC
Confidence 1111223468899999999999999999999999999987543
No 24
>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A
Probab=100.00 E-value=3.2e-43 Score=361.56 Aligned_cols=263 Identities=24% Similarity=0.455 Sum_probs=213.4
Q ss_pred HHHHhhcccCCCCceEEEEEEEc--------CCcEEEEEEccCccc-hhHHHHHHHHHHHhhc-CCCCccceeeEEEecC
Q 008707 235 ATNNFCKKIGKGSFGSVYYGKMK--------DGKEVAVKIMADSCS-HRTQQFVTEVALLSRI-HHRNLVPLIGYCEEEH 304 (557)
Q Consensus 235 ~~~~~~~~lG~G~~g~Vy~~~~~--------~~~~vavK~~~~~~~-~~~~~~~~E~~il~~l-~h~nIv~~~~~~~~~~ 304 (557)
..|++.+.||+|+||.||+|.+. ++..||+|++..... ...+.+.+|+++++.+ +||||+++++++.+.+
T Consensus 81 ~~~~~~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~~ 160 (370)
T 2psq_A 81 DKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDG 160 (370)
T ss_dssp GGEEEEEEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTTCBHHHHHHHHHHHHHHHHSCCCTTBCCEEEEECSSS
T ss_pred HHCEeeeEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCCcCHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEccCC
Confidence 44567889999999999999863 355799999976533 3456799999999999 8999999999999999
Q ss_pred eeEEEEEecCCCChhhhhhccC-------------CCCCcCHHHHHHHHHHHHHHHHHHHcCCCCCeEeeccCCCCEEeC
Q 008707 305 QRILVYEYMHNGTLRDRLHGSV-------------NQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLD 371 (557)
Q Consensus 305 ~~~lv~e~~~~gsL~~~l~~~~-------------~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~dlk~~NIll~ 371 (557)
..++||||+++|+|.+++.... ....+++..++.++.||+.||+|||+ ++|+||||||+|||++
T Consensus 161 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivHrDlkp~NIll~ 237 (370)
T 2psq_A 161 PLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLAS---QKCIHRDLAARNVLVT 237 (370)
T ss_dssp SCEEEEECCTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGGGEEEC
T ss_pred CEEEEEEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHHHHHHHh---CCeeccccchhhEEEC
Confidence 9999999999999999997542 12458899999999999999999998 9999999999999999
Q ss_pred CCCcEEEecccCccccCCCCc-cccccccCCCCccCCcccCCCCCCcccceehhHHHHHHHHh-CCCCCCCCCccccccH
Q 008707 372 INMRAKVSDFGLSRQAEEDLT-HISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELIS-GKKPVSVEDFGAELNI 449 (557)
Q Consensus 372 ~~~~~kl~Dfgla~~~~~~~~-~~~~~~~g~~~y~aPE~l~~~~~s~~~DvwslG~ll~ellt-g~~pf~~~~~~~~~~~ 449 (557)
.++.+||+|||+++....... .......+|+.|+|||++.+..++.++|||||||++|||+| |..||....... +
T Consensus 238 ~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~p~~~~~~~~---~ 314 (370)
T 2psq_A 238 ENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEE---L 314 (370)
T ss_dssp TTCCEEECCCSSCEETTCCCTTCTTTTTTSCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGG---H
T ss_pred CCCCEEEccccCCcccCcccceecccCCCcccceECHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCCCCCCHHH---H
Confidence 999999999999987644322 12223346789999999999999999999999999999999 999997543322 1
Q ss_pred HHHHHHHHhcCCccccccccccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhhhhhcC
Q 008707 450 VHWARSMIKKGDVISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKIEKG 516 (557)
Q Consensus 450 ~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~evl~~L~~~~~~~~~ 516 (557)
. ..+..+.... .+...+..+.+++.+||+.+|++|||+.||++.|+++......
T Consensus 315 ~----~~~~~~~~~~---------~~~~~~~~l~~li~~~l~~dP~~Rpt~~ell~~L~~il~~~~~ 368 (370)
T 2psq_A 315 F----KLLKEGHRMD---------KPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILTLTTN 368 (370)
T ss_dssp H----HHHHTTCCCC---------CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHC-
T ss_pred H----HHHhcCCCCC---------CCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHHhcc
Confidence 1 1222222111 1122334788999999999999999999999999999886554
No 25
>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*
Probab=100.00 E-value=8.3e-43 Score=347.65 Aligned_cols=248 Identities=24% Similarity=0.368 Sum_probs=204.3
Q ss_pred HHHhhcccCCCCceEEEEEEE-cCCcEEEEEEccCccchhHHHHHHHHHHHhhcCCCCccceeeEEEecCeeEEEEEecC
Q 008707 236 TNNFCKKIGKGSFGSVYYGKM-KDGKEVAVKIMADSCSHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYEYMH 314 (557)
Q Consensus 236 ~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~lv~e~~~ 314 (557)
.|++.+.||+|+||.||+|.. .+++.||+|++........+.+.+|+.+++.++||||+++++++...+..++||||++
T Consensus 21 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~ 100 (297)
T 3fxz_A 21 KYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLA 100 (297)
T ss_dssp TBCCCEEEEEETTEEEEEEEBTTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCT
T ss_pred ceeeeeeeccCCCeEEEEEEECCCCcEEEEEEeecccccHHHHHHHHHHHHhcCCCCCCCeEeEEEEECCEEEEEEECCC
Confidence 345578999999999999986 4689999999876555556778999999999999999999999999999999999999
Q ss_pred CCChhhhhhccCCCCCcCHHHHHHHHHHHHHHHHHHHcCCCCCeEeeccCCCCEEeCCCCcEEEecccCccccCCCCccc
Q 008707 315 NGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEEDLTHI 394 (557)
Q Consensus 315 ~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfgla~~~~~~~~~~ 394 (557)
+|+|.+++.. ..+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||++.........
T Consensus 101 ~~~L~~~~~~----~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~- 172 (297)
T 3fxz_A 101 GGSLTDVVTE----TCMDEGQIAAVCRECLQALEFLHS---NQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSK- 172 (297)
T ss_dssp TCBHHHHHHH----SCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTCCEEECCCTTCEECCSTTCC-
T ss_pred CCCHHHHHhh----cCCCHHHHHHHHHHHHHHHHHHHh---CCceeCCCCHHHEEECCCCCEEEeeCCCceecCCcccc-
Confidence 9999999974 358999999999999999999998 99999999999999999999999999999876544332
Q ss_pred cccccCCCCccCCcccCCCCCCcccceehhHHHHHHHHhCCCCCCCCCccccccHHHHHHHHHhcCCccccccccccCCC
Q 008707 395 SSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPVLIGNV 474 (557)
Q Consensus 395 ~~~~~g~~~y~aPE~l~~~~~s~~~DvwslG~ll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~ 474 (557)
.....||+.|+|||.+.+..++.++||||||+++|+|++|+.||...+... ........+.. ... .
T Consensus 173 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~------~~~~~~~~~~~-~~~-------~ 238 (297)
T 3fxz_A 173 RSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLR------ALYLIATNGTP-ELQ-------N 238 (297)
T ss_dssp BCCCCSCGGGCCHHHHHCSCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHH------HHHHHHHHCSC-CCS-------C
T ss_pred cCCccCCcCccChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH------HHHHHHhCCCC-CCC-------C
Confidence 234468999999999999999999999999999999999999997443211 11111111111 110 0
Q ss_pred CHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 008707 475 KIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 505 (557)
Q Consensus 475 ~~~~~~~l~~li~~cl~~~P~~RPt~~evl~ 505 (557)
+......+.+++.+||+.||++|||++|+++
T Consensus 239 ~~~~~~~~~~li~~~l~~dp~~Rps~~ell~ 269 (297)
T 3fxz_A 239 PEKLSAIFRDFLNRCLEMDVEKRGSAKELLQ 269 (297)
T ss_dssp GGGSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred ccccCHHHHHHHHHHccCChhHCcCHHHHhh
Confidence 1122346889999999999999999999986
No 26
>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*
Probab=100.00 E-value=2.5e-43 Score=355.58 Aligned_cols=266 Identities=25% Similarity=0.339 Sum_probs=207.6
Q ss_pred HHHhhcccCCCCceEEEEEEEcCCcEEEEEEccCccchhHHHHHHHHHHHhhcCCCCccceeeEEEecC----eeEEEEE
Q 008707 236 TNNFCKKIGKGSFGSVYYGKMKDGKEVAVKIMADSCSHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEH----QRILVYE 311 (557)
Q Consensus 236 ~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~----~~~lv~e 311 (557)
.|++.+.||+|+||.||+|.+. ++.||||++... ......+.+|+.++++++||||+++++++.... ..++|||
T Consensus 25 ~y~~~~~lg~G~~g~Vy~~~~~-~~~vavK~~~~~-~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~lv~e 102 (322)
T 3soc_A 25 PLQLLEVKARGRFGCVWKAQLL-NEYVAVKIFPIQ-DKQSWQNEYEVYSLPGMKHENILQFIGAEKRGTSVDVDLWLITA 102 (322)
T ss_dssp EEEEEEEEECSTTCEEEEEEET-TEEEEEEEECGG-GHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEEE
T ss_pred hchhhheecccCceEEEEEEEC-CCEEEEEEeecC-chHHHHHHHHHHHHhcCCCCCchhhcceeccCCCCCceEEEEEe
Confidence 4556789999999999999887 899999998654 233445667899999999999999999998744 4699999
Q ss_pred ecCCCChhhhhhccCCCCCcCHHHHHHHHHHHHHHHHHHHcCCCC----------CeEeeccCCCCEEeCCCCcEEEecc
Q 008707 312 YMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNP----------GIIHRDVKSSNILLDINMRAKVSDF 381 (557)
Q Consensus 312 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~----------~ivH~dlk~~NIll~~~~~~kl~Df 381 (557)
|+++|+|.++++. ..+++..++.++.|++.||+|||+ . +|+||||||+|||++.++.+||+||
T Consensus 103 ~~~~g~L~~~l~~----~~~~~~~~~~i~~qi~~al~~LH~---~~~~l~~~~~~~ivH~Dlkp~Nill~~~~~~kL~DF 175 (322)
T 3soc_A 103 FHEKGSLSDFLKA----NVVSWNELCHIAETMARGLAYLHE---DIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADF 175 (322)
T ss_dssp CCTTCBHHHHHHH----CCBCHHHHHHHHHHHHHHHHHHTC---CEEEETTEEECEEECSCCSGGGEEECTTCCEEECCC
T ss_pred cCCCCCHHHHHHh----cCCCHHHHHHHHHHHHHHHHHHHh---hccccccccCCCEEeCCCChHhEEECCCCeEEEccC
Confidence 9999999999974 348999999999999999999998 7 9999999999999999999999999
Q ss_pred cCccccCCCCcc-ccccccCCCCccCCcccCCC-----CCCcccceehhHHHHHHHHhCCCCCCCCCccccc--------
Q 008707 382 GLSRQAEEDLTH-ISSVARGTVGYLDPEYYGNQ-----QLTEKSDVYSFGVVLLELISGKKPVSVEDFGAEL-------- 447 (557)
Q Consensus 382 gla~~~~~~~~~-~~~~~~g~~~y~aPE~l~~~-----~~s~~~DvwslG~ll~elltg~~pf~~~~~~~~~-------- 447 (557)
|++......... ......||+.|+|||++.+. .++.++|||||||++|||+||+.||.+.......
T Consensus 176 g~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~ 255 (322)
T 3soc_A 176 GLALKFEAGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPVDEYMLPFEEEIGQ 255 (322)
T ss_dssp TTCEEECTTSCCCCCTTCCCCGGGCCHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHTTBTTSSSCCCCCCCTTHHHHCS
T ss_pred CcccccccccCccccccCccCccccCHhhcccccccCcCCCccchhHHHHHHHHHHHhCCCCCCCCcchhccchhhhhcc
Confidence 999876543322 22334689999999999873 5567899999999999999999999865433211
Q ss_pred --cHHHHHHHHHhcCCccccccccccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhhhhh
Q 008707 448 --NIVHWARSMIKKGDVISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKIE 514 (557)
Q Consensus 448 --~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~evl~~L~~~~~~~ 514 (557)
....+... ...+.....+.... .....+..+.+++.+||+.||++|||++||++.|+++.+..
T Consensus 256 ~~~~~~~~~~-~~~~~~~~~~~~~~---~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~~~~ 320 (322)
T 3soc_A 256 HPSLEDMQEV-VVHKKKRPVLRDYW---QKHAGMAMLCETIEECWDHDAEARLSAGCVGERITQMQRLT 320 (322)
T ss_dssp SCCHHHHHHH-HTTSCCCCCCCGGG---GSSHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHC
T ss_pred CCchhhhhhh-hhcccCCCCccccc---cccchHHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHHh
Confidence 11111111 11111111111100 12244567999999999999999999999999999988753
No 27
>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*
Probab=100.00 E-value=3.2e-42 Score=344.83 Aligned_cols=279 Identities=37% Similarity=0.588 Sum_probs=224.0
Q ss_pred cCChhHHHHHHHHhh--------cccCCCCceEEEEEEEcCCcEEEEEEccCcc----chhHHHHHHHHHHHhhcCCCCc
Q 008707 226 FIPLPELEEATNNFC--------KKIGKGSFGSVYYGKMKDGKEVAVKIMADSC----SHRTQQFVTEVALLSRIHHRNL 293 (557)
Q Consensus 226 ~~~~~~~~~~~~~~~--------~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~----~~~~~~~~~E~~il~~l~h~nI 293 (557)
.++..++...+.+|. +.||+|+||.||+|.. +++.||+|++.... ....+.+.+|+++++.++||||
T Consensus 14 ~~~~~~l~~~~~~f~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i 92 (307)
T 2nru_A 14 SFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENL 92 (307)
T ss_dssp ECCHHHHHHHTTTTCCSBTTTTCCEEEECSSEEEEEEES-SSCEEEEEEECCCTTSCTTTHHHHHHHHHHHHHHCCCTTB
T ss_pred cccHHHHHHHHcccccccccccCCccccCCCeEEEEEEE-CCceEEEEEEecccCcchHHHHHHHHHHHHHHHhcCCCCe
Confidence 356778888887774 5699999999999987 48899999986432 2345779999999999999999
Q ss_pred cceeeEEEecCeeEEEEEecCCCChhhhhhccCCCCCcCHHHHHHHHHHHHHHHHHHHcCCCCCeEeeccCCCCEEeCCC
Q 008707 294 VPLIGYCEEEHQRILVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDIN 373 (557)
Q Consensus 294 v~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~dlk~~NIll~~~ 373 (557)
+++++++.+.+..++||||+++++|.+++........+++..++.++.|++.||+|||+ .+++||||||+||+++.+
T Consensus 93 ~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~---~~i~H~dlkp~Nili~~~ 169 (307)
T 2nru_A 93 VELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHE---NHHIHRDIKSANILLDEA 169 (307)
T ss_dssp CCEEEEECSSSSCEEEEECCTTCBHHHHHHTGGGCCCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGGGEEECTT
T ss_pred EEEEEEEecCCceEEEEEecCCCcHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhc---CCeecCCCCHHHEEEcCC
Confidence 99999999999999999999999999999755445679999999999999999999998 999999999999999999
Q ss_pred CcEEEecccCccccCCCCc-cccccccCCCCccCCcccCCCCCCcccceehhHHHHHHHHhCCCCCCCCCccccccHHHH
Q 008707 374 MRAKVSDFGLSRQAEEDLT-HISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHW 452 (557)
Q Consensus 374 ~~~kl~Dfgla~~~~~~~~-~~~~~~~g~~~y~aPE~l~~~~~s~~~DvwslG~ll~elltg~~pf~~~~~~~~~~~~~~ 452 (557)
+.+||+|||++........ .......|++.|+|||.+.+ .++.++||||||+++|+|++|..||........ ...+
T Consensus 170 ~~~kl~Dfg~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~--~~~~ 246 (307)
T 2nru_A 170 FTAKISDFGLARASEKFAQTVMTSRIVGTTAYMAPEALRG-EITPKSDIYSFGVVLLEIITGLPAVDEHREPQL--LLDI 246 (307)
T ss_dssp CCEEECCCTTCEECCSCSSCEECSSCCSCGGGCCHHHHTT-EECTHHHHHHHHHHHHHHHHCCCSBCTTBSSSB--TTHH
T ss_pred CcEEEeecccccccccccccccccccCCCcCcCChHHhcC-CCCccchhHHHHHHHHHHHHCCCCcccCcchHH--HHHH
Confidence 9999999999987654322 22233468999999998875 478999999999999999999999985443321 1122
Q ss_pred HHHHHhc-CCccccccccccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhhh
Q 008707 453 ARSMIKK-GDVISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIK 512 (557)
Q Consensus 453 ~~~~~~~-~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~evl~~L~~~~~ 512 (557)
....... ......+++.+ .......+..+.+++.+||+.+|.+|||++||++.|+++..
T Consensus 247 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~l~~~L~~l~~ 306 (307)
T 2nru_A 247 KEEIEDEEKTIEDYIDKKM-NDADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQEMTA 306 (307)
T ss_dssp HHHHHTTSCCHHHHSCSSC-SCCCHHHHHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHC-
T ss_pred HHHhhhhhhhhhhhccccc-cccchHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHhc
Confidence 2221111 11223333332 34456777889999999999999999999999999998753
No 28
>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}
Probab=100.00 E-value=1.6e-43 Score=357.38 Aligned_cols=263 Identities=26% Similarity=0.484 Sum_probs=211.3
Q ss_pred HHHHHHHhhcccCCCCceEEEEEEEc----CCcEEEEEEccCcc-chhHHHHHHHHHHHhhcCCCCccceeeEEEecCee
Q 008707 232 LEEATNNFCKKIGKGSFGSVYYGKMK----DGKEVAVKIMADSC-SHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQR 306 (557)
Q Consensus 232 ~~~~~~~~~~~lG~G~~g~Vy~~~~~----~~~~vavK~~~~~~-~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~ 306 (557)
+....|++.+.||+|+||.||+|.+. .+..||||++.... ....+.+.+|+++++.++||||+++++++.+.+..
T Consensus 46 ~~~~~y~i~~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 125 (325)
T 3kul_A 46 IEASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLA 125 (325)
T ss_dssp CCGGGEEEEEEEEETTTEEEEEEEECCTTSCCEEEEEEEECTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECGGGCC
T ss_pred cChhHeEEeeEEEeCCCcEEEEEEEecCCCCCceEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCcc
Confidence 33455667899999999999999875 34569999987643 34456799999999999999999999999999999
Q ss_pred EEEEEecCCCChhhhhhccCCCCCcCHHHHHHHHHHHHHHHHHHHcCCCCCeEeeccCCCCEEeCCCCcEEEecccCccc
Q 008707 307 ILVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQ 386 (557)
Q Consensus 307 ~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfgla~~ 386 (557)
++||||+++|+|.+++... ...+++..++.++.|++.||+|||+ .+|+||||||+|||++.++.+||+|||++..
T Consensus 126 ~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~i~~qi~~~L~~LH~---~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~ 200 (325)
T 3kul_A 126 MIVTEYMENGSLDTFLRTH--DGQFTIMQLVGMLRGVGAGMRYLSD---LGYVHRDLAARNVLVDSNLVCKVSDFGLSRV 200 (325)
T ss_dssp EEEEECCTTCBHHHHHHTT--TTCSCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTCCEEECCCSSCEE
T ss_pred EEEeeCCCCCcHHHHHHhc--ccCCCHHHHHHHHHHHHHHHHHHHH---CCeeCCCCCcceEEECCCCCEEECCCCcccc
Confidence 9999999999999999642 4568999999999999999999998 9999999999999999999999999999987
Q ss_pred cCCCCcc--ccccccCCCCccCCcccCCCCCCcccceehhHHHHHHHHh-CCCCCCCCCccccccHHHHHHHHHhcCCcc
Q 008707 387 AEEDLTH--ISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELIS-GKKPVSVEDFGAELNIVHWARSMIKKGDVI 463 (557)
Q Consensus 387 ~~~~~~~--~~~~~~g~~~y~aPE~l~~~~~s~~~DvwslG~ll~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 463 (557)
....... ......+|+.|+|||.+.+..++.++||||||+++|+|++ |..||....... +...+..+...
T Consensus 201 ~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~-------~~~~~~~~~~~ 273 (325)
T 3kul_A 201 LEDDPDAAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNRD-------VISSVEEGYRL 273 (325)
T ss_dssp CC----CCEECC---CCGGGSCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTSCHHH-------HHHHHHTTCCC
T ss_pred cccCccceeeccCCCCcccccCHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCcccCCHHH-------HHHHHHcCCCC
Confidence 6543221 1222335778999999998899999999999999999999 999997433211 11122222111
Q ss_pred ccccccccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhhhhhc
Q 008707 464 SIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKIEK 515 (557)
Q Consensus 464 ~~~d~~l~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~evl~~L~~~~~~~~ 515 (557)
. .+...+..+.+++.+||..||++|||++||++.|+.+.....
T Consensus 274 ~---------~~~~~~~~l~~li~~~l~~dp~~Rps~~eil~~L~~l~~~~~ 316 (325)
T 3kul_A 274 P---------APMGCPHALHQLMLDCWHKDRAQRPRFSQIVSVLDALIRSPE 316 (325)
T ss_dssp C---------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHSCC
T ss_pred C---------CCCCcCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhCcc
Confidence 1 111233478899999999999999999999999999987544
No 29
>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*
Probab=100.00 E-value=1.1e-43 Score=348.29 Aligned_cols=258 Identities=28% Similarity=0.456 Sum_probs=212.2
Q ss_pred HHHHhhcccCCCCceEEEEEEEcCCcEEEEEEccCccchhHHHHHHHHHHHhhcCCCCccceeeEEEecCeeEEEEEecC
Q 008707 235 ATNNFCKKIGKGSFGSVYYGKMKDGKEVAVKIMADSCSHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYEYMH 314 (557)
Q Consensus 235 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~lv~e~~~ 314 (557)
..|++.+.||+|+||.||+|.++++..||+|++..... ..+.+.+|+++++.++||||+++++++.+.+..++||||++
T Consensus 8 ~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 86 (268)
T 3sxs_A 8 EEITLLKELGSGQFGVVKLGKWKGQYDVAVKMIKEGSM-SEDEFFQEAQTMMKLSHPKLVKFYGVCSKEYPIYIVTEYIS 86 (268)
T ss_dssp GGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECBTTB-CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEEECCT
T ss_pred hheeeeeeeccCCCceEEEEEecCceeEEEEEeccCCC-cHHHHHHHHHHHHhCCCCCEeeEEEEEccCCceEEEEEccC
Confidence 44567899999999999999999888999999875432 34678999999999999999999999999999999999999
Q ss_pred CCChhhhhhccCCCCCcCHHHHHHHHHHHHHHHHHHHcCCCCCeEeeccCCCCEEeCCCCcEEEecccCccccCCCCccc
Q 008707 315 NGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEEDLTHI 394 (557)
Q Consensus 315 ~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfgla~~~~~~~~~~ 394 (557)
+++|.+++... ...+++..++.++.|++.||+|||+ .+++||||||+||+++.++.++|+|||++..........
T Consensus 87 ~~~L~~~l~~~--~~~~~~~~~~~i~~qi~~~l~~lH~---~~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~ 161 (268)
T 3sxs_A 87 NGCLLNYLRSH--GKGLEPSQLLEMCYDVCEGMAFLES---HQFIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQYVS 161 (268)
T ss_dssp TCBHHHHHHHH--GGGCCHHHHHHHHHHHHHHHHHHHH---TTEEESSCSGGGEEECTTCCEEECCTTCEEECCTTCEEE
T ss_pred CCcHHHHHHHc--CCCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCcCcceEEECCCCCEEEccCccceecchhhhhc
Confidence 99999999753 3468999999999999999999998 999999999999999999999999999998765554433
Q ss_pred cccccCCCCccCCcccCCCCCCcccceehhHHHHHHHHh-CCCCCCCCCccccccHHHHHHHHHhcCCccccccccccCC
Q 008707 395 SSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELIS-GKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPVLIGN 473 (557)
Q Consensus 395 ~~~~~g~~~y~aPE~l~~~~~s~~~DvwslG~ll~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~ 473 (557)
.....+++.|+|||.+.+..++.++||||||+++|+|+| |+.||....... ... .+..+... ..+
T Consensus 162 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~------~~~-~~~~~~~~--~~~----- 227 (268)
T 3sxs_A 162 SVGTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYTNSE------VVL-KVSQGHRL--YRP----- 227 (268)
T ss_dssp CCSCCCCGGGCCHHHHHHSEEETTHHHHHHHHHHHHHHTTTCCTTTTSCHHH------HHH-HHHTTCCC--CCC-----
T ss_pred ccCCCcCcccCCHHHHhccCCchhhhhHHHHHHHHHHHcCCCCCccccChHH------HHH-HHHcCCCC--CCC-----
Confidence 344456788999999998889999999999999999999 999997443221 111 12222111 111
Q ss_pred CCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhhhhh
Q 008707 474 VKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKIE 514 (557)
Q Consensus 474 ~~~~~~~~l~~li~~cl~~~P~~RPt~~evl~~L~~~~~~~ 514 (557)
...+..+.+++.+||+.+|++|||++|+++.|+.+.+.+
T Consensus 228 --~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~l~~~~ 266 (268)
T 3sxs_A 228 --HLASDTIYQIMYSCWHELPEKRPTFQQLLSSIEPLREKD 266 (268)
T ss_dssp --TTSCHHHHHHHHHTTCSSGGGSCCHHHHHHHHGGGCC--
T ss_pred --CcChHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhhcc
Confidence 111236889999999999999999999999999887653
No 30
>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00 E-value=2.5e-43 Score=346.10 Aligned_cols=256 Identities=28% Similarity=0.455 Sum_probs=211.5
Q ss_pred HHHhhcccCCCCceEEEEEEEcCCcEEEEEEccCccchhHHHHHHHHHHHhhcCCCCccceeeEEEecCeeEEEEEecCC
Q 008707 236 TNNFCKKIGKGSFGSVYYGKMKDGKEVAVKIMADSCSHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYEYMHN 315 (557)
Q Consensus 236 ~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~lv~e~~~~ 315 (557)
.|++.+.||+|+||.||+|.+.+++.||+|++..... ..+.+.+|++++++++||||+++++++.+++..++||||+++
T Consensus 11 ~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~ 89 (269)
T 4hcu_A 11 ELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAM-SEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEH 89 (269)
T ss_dssp GEEEEEEEEECSSCEEEEEEETTTEEEEEEEECTTSB-CHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEEECCTT
T ss_pred hceeeheecCCCccEEEEEEecCCCeEEEEEeccccc-CHHHHHHHHHHHHhCCCCCEeeEEEEEecCCceEEEEEeCCC
Confidence 4556789999999999999998899999999875433 346789999999999999999999999999999999999999
Q ss_pred CChhhhhhccCCCCCcCHHHHHHHHHHHHHHHHHHHcCCCCCeEeeccCCCCEEeCCCCcEEEecccCccccCCCCcccc
Q 008707 316 GTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEEDLTHIS 395 (557)
Q Consensus 316 gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfgla~~~~~~~~~~~ 395 (557)
++|.+++... ...+++..++.++.|+++||+|||+ .+++||||||+||+++.++.+||+|||++...........
T Consensus 90 ~~L~~~l~~~--~~~~~~~~~~~i~~~i~~~l~~lH~---~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~ 164 (269)
T 4hcu_A 90 GCLSDYLRTQ--RGLFAAETLLGMCLDVCEGMAYLEE---ACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSS 164 (269)
T ss_dssp CBHHHHHHTT--TTCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECGGGCEEECCTTGGGGBCCHHHHST
T ss_pred CcHHHHHHhc--CcccCHHHHHHHHHHHHHHHHHHHh---CCeecCCcchheEEEcCCCCEEeccccccccccccccccc
Confidence 9999999742 4568999999999999999999998 9999999999999999999999999999987654433333
Q ss_pred ccccCCCCccCCcccCCCCCCcccceehhHHHHHHHHh-CCCCCCCCCccccccHHHHHHHHHhcCCccccccccccCCC
Q 008707 396 SVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELIS-GKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPVLIGNV 474 (557)
Q Consensus 396 ~~~~g~~~y~aPE~l~~~~~s~~~DvwslG~ll~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~ 474 (557)
....+++.|+|||.+.+..++.++||||+|+++|+|++ |+.||...... +.. ..+..+... ..
T Consensus 165 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~~g~~p~~~~~~~------~~~-~~~~~~~~~--~~------- 228 (269)
T 4hcu_A 165 TGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNS------EVV-EDISTGFRL--YK------- 228 (269)
T ss_dssp TSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHH------HHH-HHHHTTCCC--CC-------
T ss_pred cCcccccccCCHHHhcCCCCCchhhhHHHHHHHHHHhcCCCCCCCCCCHH------HHH-HHHhcCccC--CC-------
Confidence 34456788999999998899999999999999999999 99999743321 111 112222110 01
Q ss_pred CHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhhhh
Q 008707 475 KIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKI 513 (557)
Q Consensus 475 ~~~~~~~l~~li~~cl~~~P~~RPt~~evl~~L~~~~~~ 513 (557)
+...+..+.+++.+||+.+|++|||++|+++.|+++.+.
T Consensus 229 ~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~l~~~ 267 (269)
T 4hcu_A 229 PRLASTHVYQIMNHCWRERPEDRPAFSRLLRQLAEIAES 267 (269)
T ss_dssp CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred CCcCCHHHHHHHHHHccCCcccCcCHHHHHHHHHHHHHc
Confidence 111234688999999999999999999999999998763
No 31
>3zgw_A Maternal embryonic leucine zipper kinase; transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00 E-value=3e-43 Score=357.69 Aligned_cols=248 Identities=23% Similarity=0.332 Sum_probs=195.0
Q ss_pred HHHhhcccCCCCceEEEEEEEc-CCcEEEEEEccCcc-chhHHHHHHHHHHHhhcCCCCccceeeEEEecCeeEEEEEec
Q 008707 236 TNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSC-SHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYEYM 313 (557)
Q Consensus 236 ~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~lv~e~~ 313 (557)
.|++.+.||+|+||.||+|.+. +|+.||||++.... ....+.+.+|+++++.++||||+++++++.+.+..++||||+
T Consensus 11 ~y~i~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~lv~E~~ 90 (347)
T 3zgw_A 11 YYELHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPRIKTEIEALKNLRHQHICQLYHVLETANKIFMVLEYC 90 (347)
T ss_dssp TEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESSCC---CCHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEECC
T ss_pred CeEEEEEEEcCCCeEEEEEEECCCCCEEEEEEEEccccchHHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEEEEEEeCC
Confidence 3556799999999999999874 68999999986543 233457889999999999999999999999999999999999
Q ss_pred CCCChhhhhhccCCCCCcCHHHHHHHHHHHHHHHHHHHcCCCCCeEeeccCCCCEEeCCCCcEEEecccCccccCCCCcc
Q 008707 314 HNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEEDLTH 393 (557)
Q Consensus 314 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfgla~~~~~~~~~ 393 (557)
++|+|.+++.. ...+++..+..++.||+.||+|||+ .+|+||||||+||+++.++.+||+|||++.........
T Consensus 91 ~gg~L~~~l~~---~~~l~~~~~~~i~~qi~~aL~~LH~---~givHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~~~~ 164 (347)
T 3zgw_A 91 PGGELFDYIIS---QDRLSEEETRVVFRQIVSAVAYVHS---QGYAHRDLKPENLLFDEYHKLKLIDFGLCAKPKGNKDY 164 (347)
T ss_dssp TTCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCCGGGEEECTTSCEEECCCTTCBC-------
T ss_pred CCCCHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHH---CCeEeCCccHHHEEEcCCCCEEEEeccCcccccCCCCc
Confidence 99999999874 3568999999999999999999998 99999999999999999999999999999876544333
Q ss_pred ccccccCCCCccCCcccCCCCC-CcccceehhHHHHHHHHhCCCCCCCCCccccccHHHHHHHHHhcCCccccccccccC
Q 008707 394 ISSVARGTVGYLDPEYYGNQQL-TEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPVLIG 472 (557)
Q Consensus 394 ~~~~~~g~~~y~aPE~l~~~~~-s~~~DvwslG~ll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~ 472 (557)
......||+.|+|||++.+..+ +.++||||+||++|+|++|..||...+.. +.. ..+..+...
T Consensus 165 ~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~~~~~------~~~-~~i~~~~~~--------- 228 (347)
T 3zgw_A 165 HLQTCCGSLAYAAPELIQGKSYLGSEADVWSMGILLYVLMCGFLPFDDDNVM------ALY-KKIMRGKYD--------- 228 (347)
T ss_dssp -------CGGGCCHHHHTTC---CCHHHHHHHHHHHHHHHHSSCSSCCSSHH------HHH-HHHHHTCCC---------
T ss_pred cccccCCccCccCHHHHcCCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCHH------HHH-HHHHcCCCC---------
Confidence 3445568999999999988775 88999999999999999999999743321 111 122222211
Q ss_pred CCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 008707 473 NVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLA 506 (557)
Q Consensus 473 ~~~~~~~~~l~~li~~cl~~~P~~RPt~~evl~~ 506 (557)
.+......+.+++.+||+.||++|||++|+++.
T Consensus 229 -~p~~~s~~~~~li~~~L~~dP~~Rps~~eil~h 261 (347)
T 3zgw_A 229 -VPKWLSPSSILLLQQMLQVDPKKRISMKNLLNH 261 (347)
T ss_dssp -CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHTC
T ss_pred -CCCCCCHHHHHHHHHHcccCHhHCcCHHHHhcC
Confidence 011122367799999999999999999999874
No 32
>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A
Probab=100.00 E-value=6.1e-43 Score=345.89 Aligned_cols=259 Identities=27% Similarity=0.450 Sum_probs=210.5
Q ss_pred HHHHHhhcccCCCCceEEEEEEEcCCcEEEEEEccCccchhHHHHHHHHHHHhhcCCCCccceeeEEEecCeeEEEEEec
Q 008707 234 EATNNFCKKIGKGSFGSVYYGKMKDGKEVAVKIMADSCSHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYEYM 313 (557)
Q Consensus 234 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~lv~e~~ 313 (557)
...|++.+.||+|+||.||+|.+.++..||+|++..... ..+.+.+|+++++.++||||+++++++.+.+..++||||+
T Consensus 23 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 101 (283)
T 3gen_A 23 PKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSM-SEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYM 101 (283)
T ss_dssp GGGEEEEEECC---CEEEEEEEETTTEEEEEEEECTTSB-CHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEECCC
T ss_pred HHHHHhHhhcCCCCCceEEEEEEcCCCeEEEEEecCCCC-CHHHHHHHHHHHhcCCCCCEeeEEEEEecCCCeEEEEecc
Confidence 345567899999999999999999888999999875433 3467889999999999999999999999999999999999
Q ss_pred CCCChhhhhhccCCCCCcCHHHHHHHHHHHHHHHHHHHcCCCCCeEeeccCCCCEEeCCCCcEEEecccCccccCCCCcc
Q 008707 314 HNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEEDLTH 393 (557)
Q Consensus 314 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfgla~~~~~~~~~ 393 (557)
++++|.+++... ...+++..++.++.|++.||+|||+ .+++||||||+||+++.++.+||+|||++.........
T Consensus 102 ~~~~L~~~l~~~--~~~~~~~~~~~i~~qi~~~l~~lH~---~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~~ 176 (283)
T 3gen_A 102 ANGCLLNYLREM--RHRFQTQQLLEMCKDVCEAMEYLES---KQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYT 176 (283)
T ss_dssp TTCBHHHHHHCG--GGCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSSCSGGGEEECTTSCEEECSTTGGGGBCCHHHH
T ss_pred CCCcHHHHHHHh--ccCCCHHHHHHHHHHHHHHHHHHHH---CCccCCCCccceEEEcCCCCEEEccccccccccccccc
Confidence 999999999753 3568999999999999999999998 99999999999999999999999999999876544333
Q ss_pred ccccccCCCCccCCcccCCCCCCcccceehhHHHHHHHHh-CCCCCCCCCccccccHHHHHHHHHhcCCccccccccccC
Q 008707 394 ISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELIS-GKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPVLIG 472 (557)
Q Consensus 394 ~~~~~~g~~~y~aPE~l~~~~~s~~~DvwslG~ll~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~ 472 (557)
......+|+.|+|||.+.+..++.++||||||+++|+|+| |+.||....... . ...+..+....
T Consensus 177 ~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~t~g~~p~~~~~~~~------~-~~~~~~~~~~~-------- 241 (283)
T 3gen_A 177 SSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSE------T-AEHIAQGLRLY-------- 241 (283)
T ss_dssp STTSTTSCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTTCCTTTTSCHHH------H-HHHHHTTCCCC--------
T ss_pred cccCCccCcccCCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCccccChhH------H-HHHHhcccCCC--------
Confidence 3333446788999999998889999999999999999998 999997443211 1 11122221110
Q ss_pred CCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhhhhh
Q 008707 473 NVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKIE 514 (557)
Q Consensus 473 ~~~~~~~~~l~~li~~cl~~~P~~RPt~~evl~~L~~~~~~~ 514 (557)
.+...+..+.+++.+||+.+|++|||++|+++.|+++.+.+
T Consensus 242 -~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~~~~~e 282 (283)
T 3gen_A 242 -RPHLASEKVYTIMYSCWHEKADERPTFKILLSNILDVMDEE 282 (283)
T ss_dssp -CCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHHC
T ss_pred -CCCcCCHHHHHHHHHHccCChhHCcCHHHHHHHHHHHhhcc
Confidence 01111246889999999999999999999999999998754
No 33
>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}
Probab=100.00 E-value=1e-42 Score=346.45 Aligned_cols=265 Identities=26% Similarity=0.409 Sum_probs=208.4
Q ss_pred HHHhhcccCCCCceEEEEEEEc-CCcEEEEEEccCc---cchhHHHHHHHHHHHhhcCCCCccceeeEEEecCeeEEEEE
Q 008707 236 TNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADS---CSHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYE 311 (557)
Q Consensus 236 ~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~lv~e 311 (557)
.|++.+.||+|+||.||+|... +++.||+|++... .....+.+.+|+.+++.++||||+++++++.+++..++|||
T Consensus 12 ~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e 91 (294)
T 4eqm_A 12 RYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMIDVDEEDDCYYLVME 91 (294)
T ss_dssp TEEEEEEEEEETTEEEEEEEETTTCSEEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCBTTBCCEEEEEECSSEEEEEEE
T ss_pred cEEEEEEEccCCCEEEEEEEECCCCCeEEEEEeccCccccHHHHHHHHHHHHHHhcCCCCCCceEEEeeeeCCeEEEEEe
Confidence 4566799999999999999865 6889999988543 22345678999999999999999999999999999999999
Q ss_pred ecCCCChhhhhhccCCCCCcCHHHHHHHHHHHHHHHHHHHcCCCCCeEeeccCCCCEEeCCCCcEEEecccCccccCCCC
Q 008707 312 YMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEEDL 391 (557)
Q Consensus 312 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfgla~~~~~~~ 391 (557)
|+++++|.+++.. ...+++..+..++.|++.||+|||+ .+++||||||+||+++.++.+||+|||++.......
T Consensus 92 ~~~g~~L~~~l~~---~~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 165 (294)
T 4eqm_A 92 YIEGPTLSEYIES---HGPLSVDTAINFTNQILDGIKHAHD---MRIVHRDIKPQNILIDSNKTLKIFDFGIAKALSETS 165 (294)
T ss_dssp CCCSCBHHHHHHH---HCSCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTSCEEECCCSSSTTC----
T ss_pred CCCCCCHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEEECCCCCEEEEeCCCcccccccc
Confidence 9999999999974 3568999999999999999999998 999999999999999999999999999998765443
Q ss_pred ccccccccCCCCccCCcccCCCCCCcccceehhHHHHHHHHhCCCCCCCCCccccccHHHHHHHHHhcCCcccccccccc
Q 008707 392 THISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPVLI 471 (557)
Q Consensus 392 ~~~~~~~~g~~~y~aPE~l~~~~~s~~~DvwslG~ll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~ 471 (557)
........||+.|+|||.+.+..++.++||||||+++|+|+||+.||...... ......+... .... .
T Consensus 166 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~------~~~~~~~~~~-~~~~-----~ 233 (294)
T 4eqm_A 166 LTQTNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFNGETAV------SIAIKHIQDS-VPNV-----T 233 (294)
T ss_dssp ---------CCSSCCHHHHHTCCCCTTHHHHHHHHHHHHHHHSSCSSCSSCHH------HHHHHHHSSC-CCCH-----H
T ss_pred ccccCccccCccccCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChH------HHHHHHhhcc-CCCc-----c
Confidence 33334456899999999999999999999999999999999999999744321 1111222111 1100 0
Q ss_pred CCCCHHHHHHHHHHHHHccccCCCCCC-CHHHHHHHHHhhhhhhcCCC
Q 008707 472 GNVKIESIWRIAEVAIQCVEQRGFSRP-KMQEIVLAIQDSIKIEKGGD 518 (557)
Q Consensus 472 ~~~~~~~~~~l~~li~~cl~~~P~~RP-t~~evl~~L~~~~~~~~~~~ 518 (557)
.......+..+.+++.+|++.||++|| +++++.+.|+.........+
T Consensus 234 ~~~~~~~~~~l~~li~~~l~~dp~~R~~~~~~l~~~l~~~~~~~~~~~ 281 (294)
T 4eqm_A 234 TDVRKDIPQSLSNVILRATEKDKANRYKTIQEMKDDLSSVLHENRANE 281 (294)
T ss_dssp HHSCTTSCHHHHHHHHHHSCSSGGGSCSSHHHHHHHHHTSSSSSSTTC
T ss_pred hhcccCCCHHHHHHHHHHhcCCHhHccccHHHHHHHHHHHHhhccCCc
Confidence 011122334788999999999999999 99999999998876544443
No 34
>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A
Probab=100.00 E-value=7.1e-43 Score=352.72 Aligned_cols=245 Identities=26% Similarity=0.418 Sum_probs=203.0
Q ss_pred HHhhcccCCCCceEEEEEEE-cCCcEEEEEEccCc--cchhHHHHHHHHHHHhhcCCCCccceeeEEEecCeeEEEEEec
Q 008707 237 NNFCKKIGKGSFGSVYYGKM-KDGKEVAVKIMADS--CSHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYEYM 313 (557)
Q Consensus 237 ~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~--~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~lv~e~~ 313 (557)
|++.+.||+|+||.||+|.+ .+|+.||+|++... .....+.+.+|+++++.++||||+++++++.+.+..++||||+
T Consensus 17 y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~e~~ 96 (328)
T 3fe3_A 17 YRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLIMEYA 96 (328)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCC
T ss_pred EEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhhcCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEEEECC
Confidence 45678999999999999987 47999999998653 2334567889999999999999999999999999999999999
Q ss_pred CCCChhhhhhccCCCCCcCHHHHHHHHHHHHHHHHHHHcCCCCCeEeeccCCCCEEeCCCCcEEEecccCccccCCCCcc
Q 008707 314 HNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEEDLTH 393 (557)
Q Consensus 314 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfgla~~~~~~~~~ 393 (557)
++|+|.+++.. ...+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||++........
T Consensus 97 ~~~~L~~~l~~---~~~l~~~~~~~~~~qi~~al~~lH~---~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~- 169 (328)
T 3fe3_A 97 SGGEVFDYLVA---HGRMKEKEARSKFRQIVSAVQYCHQ---KRIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGK- 169 (328)
T ss_dssp TTCBHHHHHHH---HCCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECTTSCEEECSTTCCGGGSSSCG-
T ss_pred CCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHH---CCEeccCCCHHHEEEcCCCCEEEeeccCceecCCCCc-
Confidence 99999999974 3568999999999999999999998 9999999999999999999999999999987654322
Q ss_pred ccccccCCCCccCCcccCCCCCC-cccceehhHHHHHHHHhCCCCCCCCCccccccHHHHHHHHHhcCCccccccccccC
Q 008707 394 ISSVARGTVGYLDPEYYGNQQLT-EKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPVLIG 472 (557)
Q Consensus 394 ~~~~~~g~~~y~aPE~l~~~~~s-~~~DvwslG~ll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~ 472 (557)
.....||+.|+|||++.+..+. .++||||+||++|+|++|+.||.+.+.. + ....+..+...
T Consensus 170 -~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~------~-~~~~i~~~~~~--------- 232 (328)
T 3fe3_A 170 -LDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLK------E-LRERVLRGKYR--------- 232 (328)
T ss_dssp -GGTTSSSGGGCCHHHHHTCCCCSHHHHHHHHHHHHHHHHHSSCSSCCSSHH------H-HHHHHHHCCCC---------
T ss_pred -cccccCCcceeCcccccCCCcCCchhhhhhhHHHHHHHHhCCCCCCCCCHH------H-HHHHHHhCCCC---------
Confidence 3345699999999999887765 7999999999999999999999854322 1 11222222211
Q ss_pred CCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 008707 473 NVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLA 506 (557)
Q Consensus 473 ~~~~~~~~~l~~li~~cl~~~P~~RPt~~evl~~ 506 (557)
.+......+.+++.+||..||.+|||++|+++.
T Consensus 233 -~p~~~s~~~~~li~~~L~~dP~~R~t~~eil~h 265 (328)
T 3fe3_A 233 -IPFYMSTDCENLLKRFLVLNPIKRGTLEQIMKD 265 (328)
T ss_dssp -CCTTSCHHHHHHHHHHCCSSTTTSCCHHHHTTC
T ss_pred -CCCCCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 011123467899999999999999999999863
No 35
>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*
Probab=100.00 E-value=8.3e-42 Score=344.25 Aligned_cols=245 Identities=25% Similarity=0.395 Sum_probs=203.2
Q ss_pred hhcccCCCCceEEEEEEEc-CCcEEEEEEccCccchhHHHHHHHHHHHhhcCCCCccceeeEEEecCeeEEEEEecCCCC
Q 008707 239 FCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCSHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYEYMHNGT 317 (557)
Q Consensus 239 ~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~lv~e~~~~gs 317 (557)
..+.||+|+||.||+|... +|+.||||++........+.+.+|+.+++.++||||+++++++...+..++||||+++++
T Consensus 49 ~~~~lg~G~~g~V~~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~ 128 (321)
T 2c30_A 49 SYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFNVVEMYKSYLVGEELWVLMEFLQGGA 128 (321)
T ss_dssp EEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCSHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEECCCCSCB
T ss_pred ccEEeccCCCeEEEEEEECCCCcEEEEEEEeccchhHHHHHHHHHHHHHhCCCCCcceEEEEEEECCEEEEEEecCCCCC
Confidence 3568999999999999886 699999999876655566788999999999999999999999999999999999999999
Q ss_pred hhhhhhccCCCCCcCHHHHHHHHHHHHHHHHHHHcCCCCCeEeeccCCCCEEeCCCCcEEEecccCccccCCCCcccccc
Q 008707 318 LRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEEDLTHISSV 397 (557)
Q Consensus 318 L~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfgla~~~~~~~~~~~~~ 397 (557)
|.+++. ...+++..+..++.|++.||+|||+ .+++||||||+||+++.++.+||+|||++......... ...
T Consensus 129 L~~~l~----~~~l~~~~~~~i~~qi~~~L~~LH~---~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~~-~~~ 200 (321)
T 2c30_A 129 LTDIVS----QVRLNEEQIATVCEAVLQALAYLHA---QGVIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVPK-RKS 200 (321)
T ss_dssp HHHHHT----TCCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTCCEEECCCTTCEECCSSSCC-BCC
T ss_pred HHHHHH----hcCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHEEECCCCcEEEeeeeeeeecccCccc-ccc
Confidence 999986 3468999999999999999999998 99999999999999999999999999999876543322 233
Q ss_pred ccCCCCccCCcccCCCCCCcccceehhHHHHHHHHhCCCCCCCCCccccccHHHHHHHHHhcCCccccccccccCCCCHH
Q 008707 398 ARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPVLIGNVKIE 477 (557)
Q Consensus 398 ~~g~~~y~aPE~l~~~~~s~~~DvwslG~ll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~ 477 (557)
..||+.|+|||.+.+..++.++||||||+++|+|++|+.||...... +... .+..+....... ...
T Consensus 201 ~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~------~~~~-~~~~~~~~~~~~-------~~~ 266 (321)
T 2c30_A 201 LVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPPYFSDSPV------QAMK-RLRDSPPPKLKN-------SHK 266 (321)
T ss_dssp CCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHH------HHHH-HHHHSSCCCCTT-------GGG
T ss_pred ccCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH------HHHH-HHhcCCCCCcCc-------ccc
Confidence 46899999999999999999999999999999999999999743221 1111 122221111110 111
Q ss_pred HHHHHHHHHHHccccCCCCCCCHHHHHH
Q 008707 478 SIWRIAEVAIQCVEQRGFSRPKMQEIVL 505 (557)
Q Consensus 478 ~~~~l~~li~~cl~~~P~~RPt~~evl~ 505 (557)
.+..+.+++.+||+.||++|||++|+++
T Consensus 267 ~~~~l~~li~~~l~~dp~~Rps~~ell~ 294 (321)
T 2c30_A 267 VSPVLRDFLERMLVRDPQERATAQELLD 294 (321)
T ss_dssp SCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred CCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 2346889999999999999999999986
No 36
>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...
Probab=100.00 E-value=4.1e-44 Score=356.62 Aligned_cols=266 Identities=28% Similarity=0.449 Sum_probs=208.3
Q ss_pred HHHHHhhcccCCCCceEEEEEEEc-----CCcEEEEEEccCccchhHHHHHHHHHHHhhcCCCCccceeeEEEec--Cee
Q 008707 234 EATNNFCKKIGKGSFGSVYYGKMK-----DGKEVAVKIMADSCSHRTQQFVTEVALLSRIHHRNLVPLIGYCEEE--HQR 306 (557)
Q Consensus 234 ~~~~~~~~~lG~G~~g~Vy~~~~~-----~~~~vavK~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~--~~~ 306 (557)
...|++.+.||+|+||.||+|.+. +++.||+|++........+.+.+|+++++.++||||+++++++... ...
T Consensus 9 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 88 (295)
T 3ugc_A 9 ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNL 88 (295)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEECTTCSSCCEEEEEEEESCCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECHHHHTSC
T ss_pred HHHhhhhheeeccCCEEEEEEEEecccCCCCcEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCCce
Confidence 345667899999999999999852 5889999999876666677899999999999999999999998653 458
Q ss_pred EEEEEecCCCChhhhhhccCCCCCcCHHHHHHHHHHHHHHHHHHHcCCCCCeEeeccCCCCEEeCCCCcEEEecccCccc
Q 008707 307 ILVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQ 386 (557)
Q Consensus 307 ~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfgla~~ 386 (557)
++||||+++|+|.+++... ...+++..++.++.|++.||+|||+ .+++||||||+||+++.++.+||+|||++..
T Consensus 89 ~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~Dikp~Nil~~~~~~~kl~Dfg~~~~ 163 (295)
T 3ugc_A 89 KLIMEYLPYGSLRDYLQKH--KERIDHIKLLQYTSQICKGMEYLGT---KRYIHRDLATRNILVENENRVKIGDFGLTKV 163 (295)
T ss_dssp EEEEECCTTCBHHHHHHHC--GGGCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEEEETTEEEECCCCSCC-
T ss_pred EEEEEeCCCCCHHHHHHhc--ccccCHHHHHHHHHHHHHHHHHHhc---CCcccCCCCHhhEEEcCCCeEEEccCccccc
Confidence 9999999999999999753 3458999999999999999999998 9999999999999999999999999999987
Q ss_pred cCCCCc--cccccccCCCCccCCcccCCCCCCcccceehhHHHHHHHHhCCCCCCCCCcc---------ccccHHHHHHH
Q 008707 387 AEEDLT--HISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFG---------AELNIVHWARS 455 (557)
Q Consensus 387 ~~~~~~--~~~~~~~g~~~y~aPE~l~~~~~s~~~DvwslG~ll~elltg~~pf~~~~~~---------~~~~~~~~~~~ 455 (557)
...... .......++..|+|||.+.+..++.++||||||+++|+|+||..||...... ...........
T Consensus 164 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (295)
T 3ugc_A 164 LPQDKEFFKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIE 243 (295)
T ss_dssp ------------CTTCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTTCTTCSHHHHHHHHHCTTCCTHHHHHHHHH
T ss_pred ccCCcceeeeccCCCCccceeCcHHhcCCCCChHHHHHHHHHHHHHHHhcccccCCChHHHHhhhcCccccchhHHHHHH
Confidence 644322 1222334677899999999999999999999999999999999998733211 00011111222
Q ss_pred HHhcCCccccccccccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhhhh
Q 008707 456 MIKKGDVISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKI 513 (557)
Q Consensus 456 ~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~evl~~L~~~~~~ 513 (557)
.+..+.... .+...+..+.+++.+||+.||++|||++||++.|+++.+.
T Consensus 244 ~~~~~~~~~---------~~~~~~~~l~~li~~~l~~dp~~Rps~~el~~~L~~l~~~ 292 (295)
T 3ugc_A 244 LLKNNGRLP---------RPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDN 292 (295)
T ss_dssp HHHTTCCCC---------CCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred HHhccCcCC---------CCcCcCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHHh
Confidence 222221111 1122345788999999999999999999999999998764
No 37
>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}
Probab=100.00 E-value=1.1e-42 Score=359.36 Aligned_cols=271 Identities=24% Similarity=0.416 Sum_probs=217.1
Q ss_pred HHHHHHhhcccCCCCceEEEEEEEc--------CCcEEEEEEccCcc-chhHHHHHHHHHHHhhc-CCCCccceeeEEEe
Q 008707 233 EEATNNFCKKIGKGSFGSVYYGKMK--------DGKEVAVKIMADSC-SHRTQQFVTEVALLSRI-HHRNLVPLIGYCEE 302 (557)
Q Consensus 233 ~~~~~~~~~~lG~G~~g~Vy~~~~~--------~~~~vavK~~~~~~-~~~~~~~~~E~~il~~l-~h~nIv~~~~~~~~ 302 (557)
....+.+.+.||+|+||.||+|.+. .+..||+|++.... ....+.+.+|+++++.+ +||||+++++++..
T Consensus 67 ~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~ 146 (382)
T 3tt0_A 67 PRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQ 146 (382)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS
T ss_pred chhheEeeeEEecCCCeEEEEEEEccccccccccceEEEEEeeccccCHHHHHHHHHHHHHHHHhcCCchhhhheeeecc
Confidence 3445667899999999999999863 23579999987643 33457789999999999 89999999999999
Q ss_pred cCeeEEEEEecCCCChhhhhhccCC-------------CCCcCHHHHHHHHHHHHHHHHHHHcCCCCCeEeeccCCCCEE
Q 008707 303 EHQRILVYEYMHNGTLRDRLHGSVN-------------QKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNIL 369 (557)
Q Consensus 303 ~~~~~lv~e~~~~gsL~~~l~~~~~-------------~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~dlk~~NIl 369 (557)
.+..++||||+++|+|.+++..... ...+++..++.++.||+.||+|||+ .+|+||||||+|||
T Consensus 147 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dlkp~NIl 223 (382)
T 3tt0_A 147 DGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLAS---KKCIHRDLAARNVL 223 (382)
T ss_dssp SSSCEEEEECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEE
T ss_pred CCceEEEEEecCCCcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHHHHHHHHHh---CCEecCCCCcceEE
Confidence 9999999999999999999975421 2458999999999999999999998 99999999999999
Q ss_pred eCCCCcEEEecccCccccCCCCc-cccccccCCCCccCCcccCCCCCCcccceehhHHHHHHHHh-CCCCCCCCCccccc
Q 008707 370 LDINMRAKVSDFGLSRQAEEDLT-HISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELIS-GKKPVSVEDFGAEL 447 (557)
Q Consensus 370 l~~~~~~kl~Dfgla~~~~~~~~-~~~~~~~g~~~y~aPE~l~~~~~s~~~DvwslG~ll~ellt-g~~pf~~~~~~~~~ 447 (557)
++.++.+||+|||++........ .......+|+.|+|||++.+..++.++||||||+++|+|++ |..||...+...
T Consensus 224 l~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~ellt~g~~p~~~~~~~~-- 301 (382)
T 3tt0_A 224 VTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEE-- 301 (382)
T ss_dssp ECTTCCEEECSCSCCCCSSCCCTTCCCTTCCCGGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHH--
T ss_pred EcCCCcEEEcccCcccccccccccccccCCCCCcceeCHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCHHH--
Confidence 99999999999999987654322 22233457889999999999999999999999999999999 999997443211
Q ss_pred cHHHHHHHHHhcCCccccccccccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhhhhhcCCCCccc
Q 008707 448 NIVHWARSMIKKGDVISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKIEKGGDQKFS 522 (557)
Q Consensus 448 ~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~evl~~L~~~~~~~~~~~~~~~ 522 (557)
+...+..+..... +...+..+.+++.+||+.+|++|||++||++.|+++............
T Consensus 302 -----~~~~~~~~~~~~~---------~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~~~~~~~~~~ 362 (382)
T 3tt0_A 302 -----LFKLLKEGHRMDK---------PSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIVALTSNQEMGYY 362 (382)
T ss_dssp -----HHHHHHTTCCCCC---------CSSCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHSCSCC----
T ss_pred -----HHHHHHcCCCCCC---------CccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHHHhcCCCCCC
Confidence 1222333222111 112234788999999999999999999999999999987766655544
No 38
>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}
Probab=100.00 E-value=1.5e-41 Score=342.16 Aligned_cols=271 Identities=21% Similarity=0.302 Sum_probs=213.5
Q ss_pred HHhhcccCCCCceEEEEEEEc-CCcEEEEEEccCcc-chhHHHHHHHHHHHhhcCCCCccceeeEEEecC--eeEEEEEe
Q 008707 237 NNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSC-SHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEH--QRILVYEY 312 (557)
Q Consensus 237 ~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~--~~~lv~e~ 312 (557)
|++.+.||+|+||.||+|.+. +++.||+|++.... ....+.+.+|++++++++||||+++++++.... ..++||||
T Consensus 11 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~ 90 (319)
T 4euu_A 11 WLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIMEF 90 (319)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEEEEC
T ss_pred EEEEEEecCCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCcceEEEEeecCCCceEEEEEeC
Confidence 456789999999999999876 48999999987543 234567889999999999999999999988755 77999999
Q ss_pred cCCCChhhhhhccCCCCCcCHHHHHHHHHHHHHHHHHHHcCCCCCeEeeccCCCCEEe----CCCCcEEEecccCccccC
Q 008707 313 MHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILL----DINMRAKVSDFGLSRQAE 388 (557)
Q Consensus 313 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~dlk~~NIll----~~~~~~kl~Dfgla~~~~ 388 (557)
+++++|.+++........+++..++.++.||+.||+|||+ .+|+||||||+||++ +.++.+||+|||++....
T Consensus 91 ~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~---~~ivH~Dlkp~NIll~~~~~~~~~~kL~Dfg~a~~~~ 167 (319)
T 4euu_A 91 CPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRE---NGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELE 167 (319)
T ss_dssp CTTCBHHHHHHSGGGTTCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEEEECTTSCEEEEECCCTTCEECC
T ss_pred CCCCCHHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHH---CCEecCCCCHHHEEEeccCCCCceEEEccCCCceecC
Confidence 9999999999865444559999999999999999999998 999999999999999 778889999999998765
Q ss_pred CCCccccccccCCCCccCCcccC--------CCCCCcccceehhHHHHHHHHhCCCCCCCCCccccccHHHHHHHHHhcC
Q 008707 389 EDLTHISSVARGTVGYLDPEYYG--------NQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKG 460 (557)
Q Consensus 389 ~~~~~~~~~~~g~~~y~aPE~l~--------~~~~s~~~DvwslG~ll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~ 460 (557)
..... ....||+.|+|||++. +..++.++|||||||++|||++|+.||......... .+.........
T Consensus 168 ~~~~~--~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~--~~~~~~~~~~~ 243 (319)
T 4euu_A 168 DDEQF--VSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRN--KEVMYKIITGK 243 (319)
T ss_dssp TTCCB--CCCCSCGGGCCHHHHHHHTSCCCCCCCBCTTHHHHHHHHHHHHHHHSSCSEECTTCGGGC--HHHHHHHHHHC
T ss_pred CCCce--eecccCCCccCHHHhhhccccccccCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCccchh--HHHHHHHhcCC
Confidence 44322 2345899999999985 578899999999999999999999999744332211 11222222221
Q ss_pred Ccc---cc---------ccc--cccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhhhhh
Q 008707 461 DVI---SI---------VDP--VLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKIE 514 (557)
Q Consensus 461 ~~~---~~---------~d~--~l~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~evl~~L~~~~~~~ 514 (557)
... .. ... .............+.+++.+||+.||++|||++|+++...+.....
T Consensus 244 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~R~s~~ell~h~~d~~~~~ 311 (319)
T 4euu_A 244 PSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDILHRG 311 (319)
T ss_dssp CTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHHTC--
T ss_pred CcccchhhhcccCCccccCccCCcccccchhHHHHhHHHHHHhccCChhhhccHHHhhhccHHHhhcC
Confidence 110 00 000 1112345677788999999999999999999999999988776543
No 39
>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*
Probab=100.00 E-value=4.6e-43 Score=361.43 Aligned_cols=258 Identities=29% Similarity=0.438 Sum_probs=210.6
Q ss_pred HHHHhhcccCCCCceEEEEEEEc-CCcEEEEEEccCccc-hhHHHHHHHHHHHhhcCCCCccceeeEEEecCeeEEEEEe
Q 008707 235 ATNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCS-HRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYEY 312 (557)
Q Consensus 235 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~lv~e~ 312 (557)
..+.+.+.||+|+||.||+|.+. +++.||||++..... ...+.+.+|+++++.++||||+++++++...+..++||||
T Consensus 114 ~~~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~ 193 (377)
T 3cbl_A 114 EDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMEL 193 (377)
T ss_dssp GGEEEEEEEEEETTEEEEEEEETTTCCEEEEEECCTTSCHHHHTTTTHHHHHHTTCCCTTBCCEEEEECSSSSCEEEEEC
T ss_pred HHeEEeeEeccCCCCeEEEEEEecCCeEEEEEEccccCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEecCCCcEEEEEc
Confidence 34556899999999999999986 689999999875432 3345688999999999999999999999999999999999
Q ss_pred cCCCChhhhhhccCCCCCcCHHHHHHHHHHHHHHHHHHHcCCCCCeEeeccCCCCEEeCCCCcEEEecccCccccCCCCc
Q 008707 313 MHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEEDLT 392 (557)
Q Consensus 313 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfgla~~~~~~~~ 392 (557)
+++|+|.+++... ...+++..+..++.|++.||+|||+ ++++||||||+|||++.++.+||+|||+++.......
T Consensus 194 ~~~g~L~~~l~~~--~~~~~~~~~~~~~~qi~~~l~~LH~---~~ivHrDlkp~Nil~~~~~~~kl~DfG~s~~~~~~~~ 268 (377)
T 3cbl_A 194 VQGGDFLTFLRTE--GARLRVKTLLQMVGDAAAGMEYLES---KCCIHRDLAARNCLVTEKNVLKISDFGMSREEADGVY 268 (377)
T ss_dssp CTTCBHHHHHHHH--GGGCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTCCEEECCGGGCEECTTSEE
T ss_pred CCCCCHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHH---CCcCCcccCHHHEEEcCCCcEEECcCCCceecCCCce
Confidence 9999999999743 3468999999999999999999998 9999999999999999999999999999986544322
Q ss_pred ccc-ccccCCCCccCCcccCCCCCCcccceehhHHHHHHHHh-CCCCCCCCCccccccHHHHHHHHHhcCCccccccccc
Q 008707 393 HIS-SVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELIS-GKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPVL 470 (557)
Q Consensus 393 ~~~-~~~~g~~~y~aPE~l~~~~~s~~~DvwslG~ll~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l 470 (557)
... ....+++.|+|||.+.+..++.++||||||+++|||+| |..||...... .+...+..+.....
T Consensus 269 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~t~g~~p~~~~~~~-------~~~~~~~~~~~~~~----- 336 (377)
T 3cbl_A 269 AASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLSNQ-------QTREFVEKGGRLPC----- 336 (377)
T ss_dssp ECCSSCCEEEGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCSSTTSCHH-------HHHHHHHTTCCCCC-----
T ss_pred eecCCCCCCCcCcCCHhHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHH-------HHHHHHHcCCCCCC-----
Confidence 111 12235778999999998899999999999999999998 99999743321 12223333322111
Q ss_pred cCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhhhh
Q 008707 471 IGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKI 513 (557)
Q Consensus 471 ~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~evl~~L~~~~~~ 513 (557)
+...+..+.+++.+||+.||++|||+++|++.|+++.+.
T Consensus 337 ----~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~i~~~ 375 (377)
T 3cbl_A 337 ----PELCPDAVFRLMEQCWAYEPGQRPSFSTIYQELQSIRKR 375 (377)
T ss_dssp ----CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred ----CCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHhh
Confidence 112234788999999999999999999999999998764
No 40
>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*
Probab=100.00 E-value=5.6e-42 Score=341.92 Aligned_cols=259 Identities=25% Similarity=0.380 Sum_probs=200.3
Q ss_pred HHHhhcccCCCCceEEEEEEEcCCcEEEEEEccCccchhHHHHHHHHHHHhh--cCCCCccceeeEEEe----cCeeEEE
Q 008707 236 TNNFCKKIGKGSFGSVYYGKMKDGKEVAVKIMADSCSHRTQQFVTEVALLSR--IHHRNLVPLIGYCEE----EHQRILV 309 (557)
Q Consensus 236 ~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~il~~--l~h~nIv~~~~~~~~----~~~~~lv 309 (557)
.|++.+.||+|+||.||+|.+ +++.||||++... ..+.+.+|.+++.. ++||||+++++++.. ....++|
T Consensus 9 ~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~---~~~~~~~e~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~~lv 84 (301)
T 3q4u_A 9 DITLLECVGKGRYGEVWRGSW-QGENVAVKIFSSR---DEKSWFRETELYNTVMLRHENILGFIASDMTSRHSSTQLWLI 84 (301)
T ss_dssp GCEEEEEEEECSSEEEEEEEE-TTEEEEEEEECGG---GHHHHHHHHHHHHHTCCCCTTBCCEEEEEEEEETTEEEEEEE
T ss_pred cEEEEEeeccCCCcEEEEEEE-CCEEEEEEEeccc---cchhhHHHHHHHHHhhccCcCeeeEEEeeccccCCCceeEEe
Confidence 455679999999999999988 5899999998643 34556667777776 789999999998654 3457899
Q ss_pred EEecCCCChhhhhhccCCCCCcCHHHHHHHHHHHHHHHHHHH--------cCCCCCeEeeccCCCCEEeCCCCcEEEecc
Q 008707 310 YEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLH--------TGCNPGIIHRDVKSSNILLDINMRAKVSDF 381 (557)
Q Consensus 310 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH--------~~~~~~ivH~dlk~~NIll~~~~~~kl~Df 381 (557)
|||+++|+|.++++ ...+++..++.++.|++.||+||| + .+|+||||||+|||++.++.+||+||
T Consensus 85 ~e~~~~g~L~~~l~----~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~---~~ivH~Dlkp~Nill~~~~~~kl~Df 157 (301)
T 3q4u_A 85 THYHEMGSLYDYLQ----LTTLDTVSCLRIVLSIASGLAHLHIEIFGTQGK---PAIAHRDLKSKNILVKKNGQCCIADL 157 (301)
T ss_dssp ECCCTTCBHHHHHT----TCCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCB---CEEECSCCCGGGEEECTTSCEEECCC
T ss_pred hhhccCCCHHHHHh----hcccCHHHHHHHHHHHHHHHHHHHHhhhhccCC---CCeecCCCChHhEEEcCCCCEEEeeC
Confidence 99999999999995 356999999999999999999999 7 99999999999999999999999999
Q ss_pred cCccccCCCCccc---cccccCCCCccCCcccCCC------CCCcccceehhHHHHHHHHhC----------CCCCCCCC
Q 008707 382 GLSRQAEEDLTHI---SSVARGTVGYLDPEYYGNQ------QLTEKSDVYSFGVVLLELISG----------KKPVSVED 442 (557)
Q Consensus 382 gla~~~~~~~~~~---~~~~~g~~~y~aPE~l~~~------~~s~~~DvwslG~ll~elltg----------~~pf~~~~ 442 (557)
|++.......... .....||+.|+|||.+.+. .++.++||||||+++|||+|| +.||....
T Consensus 158 g~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DvwslG~il~el~tg~~~~~~~~~~~~pf~~~~ 237 (301)
T 3q4u_A 158 GLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYDVV 237 (301)
T ss_dssp TTCEEEETTTTEEECCCCCCCCCGGGCCHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTS
T ss_pred CCeeecccccccccccccccccccceeChhhhcCcCCCCcccCCchhhHHHHHHHHHHHHhhhcCccccccccccccccC
Confidence 9997654432221 2234689999999999876 455799999999999999999 88886332
Q ss_pred ccccccHHHHHHHHHhcCCccccccccccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhh
Q 008707 443 FGAELNIVHWARSMIKKGDVISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDS 510 (557)
Q Consensus 443 ~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~evl~~L~~~ 510 (557)
... .............+....... .......+..+.+++.+||+.||++|||++||++.|+++
T Consensus 238 ~~~-~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~i 300 (301)
T 3q4u_A 238 PND-PSFEDMRKVVCVDQQRPNIPN----RWFSDPTLTSLAKLMKECWYQNPSARLTALRIKKTLTKI 300 (301)
T ss_dssp CSS-CCHHHHHHHHTTSCCCCCCCG----GGGGSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHHH
T ss_pred CCC-cchhhhhHHHhccCCCCCCCh----hhccCccHHHHHHHHHHHhhcChhhCCCHHHHHHHHhcc
Confidence 221 112211111111111111110 112234567899999999999999999999999999875
No 41
>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B
Probab=100.00 E-value=4e-43 Score=370.73 Aligned_cols=258 Identities=24% Similarity=0.423 Sum_probs=210.7
Q ss_pred HHHHHhhcccCCCCceEEEEEEEcCCcEEEEEEccCccchhHHHHHHHHHHHhhcCCCCccceeeEEEecCeeEEEEEec
Q 008707 234 EATNNFCKKIGKGSFGSVYYGKMKDGKEVAVKIMADSCSHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYEYM 313 (557)
Q Consensus 234 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~lv~e~~ 313 (557)
...+++.+.||+|+||.||+|.++++..||||+++... ...+.+.+|+++++.++||||+++++++. .+..++||||+
T Consensus 187 ~~~~~~~~~lG~G~fg~V~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~iv~l~~~~~-~~~~~lv~e~~ 264 (454)
T 1qcf_A 187 RESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGS-MSVEAFLAEANVMKTLQHDKLVKLHAVVT-KEPIYIITEFM 264 (454)
T ss_dssp GGGEEEEEEEECCSSEEEEEEEETTTEEEEEEEECTTS-BCHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEEEECCC
T ss_pred hHHeEEEEEcccCCceEEEEEEECCccEEEEEEecCCC-ccHHHHHHHHHHHhhCCCCCEeeEEEEEe-CCccEEEEeec
Confidence 34556789999999999999999889999999987643 34678999999999999999999999986 56789999999
Q ss_pred CCCChhhhhhccCCCCCcCHHHHHHHHHHHHHHHHHHHcCCCCCeEeeccCCCCEEeCCCCcEEEecccCccccCCCCcc
Q 008707 314 HNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEEDLTH 393 (557)
Q Consensus 314 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfgla~~~~~~~~~ 393 (557)
++|+|.+++... ....+++..++.++.||+.||+|||+ ++|+||||||+|||++.++.+||+|||+++........
T Consensus 265 ~~g~L~~~l~~~-~~~~~~~~~~~~~~~qi~~~l~~LH~---~~ivHrDlkp~Nill~~~~~~kl~DFG~a~~~~~~~~~ 340 (454)
T 1qcf_A 265 AKGSLLDFLKSD-EGSKQPLPKLIDFSAQIAEGMAFIEQ---RNYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYT 340 (454)
T ss_dssp TTCBHHHHHHSH-HHHTCCHHHHHHHHHHHHHHHHHHHH---TTCCCSSCSGGGEEECTTCCEEECSTTGGGGBCCHHHH
T ss_pred CCCcHHHHHHhc-cCCCCCHHHHHHHHHHHHHHHHHHHh---CCccCCCCCHHHEEECCCCcEEEeeCCCceEcCCCcee
Confidence 999999999743 12357888999999999999999998 99999999999999999999999999999876543222
Q ss_pred ccccccCCCCccCCcccCCCCCCcccceehhHHHHHHHHh-CCCCCCCCCccccccHHHHHHHHHhcCCccccccccccC
Q 008707 394 ISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELIS-GKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPVLIG 472 (557)
Q Consensus 394 ~~~~~~g~~~y~aPE~l~~~~~s~~~DvwslG~ll~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~ 472 (557)
......+++.|+|||.+....++.++||||||+++|||+| |+.||.+.+... + ...+..+....
T Consensus 341 ~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t~g~~P~~~~~~~~---~----~~~i~~~~~~~-------- 405 (454)
T 1qcf_A 341 AREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPE---V----IRALERGYRMP-------- 405 (454)
T ss_dssp TTCSSSSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHH---H----HHHHHHTCCCC--------
T ss_pred ccCCCcccccccCHHHhccCCCCcHHHHHhHHHHHHHHHhCCCCCCCCCCHHH---H----HHHHHcCCCCC--------
Confidence 2233346788999999998899999999999999999999 999997433211 1 12222221111
Q ss_pred CCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhhhh
Q 008707 473 NVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKI 513 (557)
Q Consensus 473 ~~~~~~~~~l~~li~~cl~~~P~~RPt~~evl~~L~~~~~~ 513 (557)
.+...+..+.+++.+||+.||++|||+++|++.|+++...
T Consensus 406 -~~~~~~~~l~~li~~cl~~dp~~RPt~~~i~~~L~~~~~~ 445 (454)
T 1qcf_A 406 -RPENCPEELYNIMMRCWKNRPEERPTFEYIQSVLDDFYTA 445 (454)
T ss_dssp -CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSSSS
T ss_pred -CCCCCCHHHHHHHHHHccCChhHCcCHHHHHHHHHHHHhc
Confidence 1112344788999999999999999999999999988654
No 42
>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*
Probab=100.00 E-value=1.8e-41 Score=337.67 Aligned_cols=263 Identities=16% Similarity=0.193 Sum_probs=211.3
Q ss_pred HHHhhcccCCCCceEEEEEEE-cCCcEEEEEEccCccchhHHHHHHHHHHHhhc-CCCCccceeeEEEecCeeEEEEEec
Q 008707 236 TNNFCKKIGKGSFGSVYYGKM-KDGKEVAVKIMADSCSHRTQQFVTEVALLSRI-HHRNLVPLIGYCEEEHQRILVYEYM 313 (557)
Q Consensus 236 ~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~il~~l-~h~nIv~~~~~~~~~~~~~lv~e~~ 313 (557)
.|++.+.||+|+||.||+|.. .+++.||+|++.... ..+.+.+|+++++.+ +|+|++++++++......++||||+
T Consensus 11 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv~e~~ 88 (298)
T 1csn_A 11 HYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRS--DAPQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVLVIDLL 88 (298)
T ss_dssp TEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCT--TSCCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEEEEEECC
T ss_pred ceEEEEEEeecCCEEEEEEEECCCCcEEEEEEeccCC--ccHHHHHHHHHHHHHhcCCCCCeEEeecCCCceeEEEEEec
Confidence 355678999999999999986 468999999886432 234578899999999 7999999999999999999999999
Q ss_pred CCCChhhhhhccCCCCCcCHHHHHHHHHHHHHHHHHHHcCCCCCeEeeccCCCCEEeCCCCc-----EEEecccCccccC
Q 008707 314 HNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMR-----AKVSDFGLSRQAE 388 (557)
Q Consensus 314 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~dlk~~NIll~~~~~-----~kl~Dfgla~~~~ 388 (557)
+++|.+++... ...+++..+..++.||+.||+|||+ ++++||||||+||+++.++. +||+|||++....
T Consensus 89 -~~~L~~~l~~~--~~~~~~~~~~~i~~qi~~~l~~lH~---~~ivH~Dlkp~NIl~~~~~~~~~~~~kl~Dfg~~~~~~ 162 (298)
T 1csn_A 89 -GPSLEDLLDLC--GRKFSVKTVAMAAKQMLARVQSIHE---KSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYR 162 (298)
T ss_dssp -CCBHHHHHHHT--TTCCCHHHHHHHHHHHHHHHHHHHT---TTEECCCCCGGGEEECCSSSTTTTCEEECCCTTCEESB
T ss_pred -CCCHHHHHHHh--ccCCCHHHHHHHHHHHHHHHHHHHh---CCEecCCCCHHHEEeccCCCCCCCeEEEEECccccccc
Confidence 99999999753 4568999999999999999999998 99999999999999987766 9999999998765
Q ss_pred CCCcc------ccccccCCCCccCCcccCCCCCCcccceehhHHHHHHHHhCCCCCCCCCccccccHHHHHHHHHhcCCc
Q 008707 389 EDLTH------ISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDV 462 (557)
Q Consensus 389 ~~~~~------~~~~~~g~~~y~aPE~l~~~~~s~~~DvwslG~ll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 462 (557)
..... ......||+.|+|||.+.+..++.++||||||+++|||++|+.||...+..........+.........
T Consensus 163 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 242 (298)
T 1csn_A 163 DPVTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYERIGEKKQSTPL 242 (298)
T ss_dssp CTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCHHHHHHHHHHHHHHSCH
T ss_pred cccccccccccCccCCCCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHcCCCCcchhhccccHHHHHHHHhhccCccH
Confidence 43221 123456899999999999999999999999999999999999999865433322222222211111111
Q ss_pred cccccccccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhhhhhc
Q 008707 463 ISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKIEK 515 (557)
Q Consensus 463 ~~~~d~~l~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~evl~~L~~~~~~~~ 515 (557)
.. +... .+..+.+++.+||+.+|++|||+++|++.|+++.....
T Consensus 243 ~~-----~~~~----~~~~l~~li~~~l~~dp~~RP~~~~l~~~l~~~~~~~~ 286 (298)
T 1csn_A 243 RE-----LCAG----FPEEFYKYMHYARNLAFDATPDYDYLQGLFSKVLERLN 286 (298)
T ss_dssp HH-----HTTT----SCHHHHHHHHHHHHCCTTCCCCHHHHHHHHHHHHHHTT
T ss_pred HH-----HHhh----CcHHHHHHHHHHhcCCcccCCCHHHHHHHHHHHHHhcC
Confidence 11 1111 23478899999999999999999999999999987544
No 43
>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*
Probab=100.00 E-value=1.6e-41 Score=343.61 Aligned_cols=260 Identities=19% Similarity=0.226 Sum_probs=208.9
Q ss_pred HHhhcccCCCCceEEEEEEE-cCCcEEEEEEccCccchhHHHHHHHHHHHhhc-CCCCccceeeEEEecCeeEEEEEecC
Q 008707 237 NNFCKKIGKGSFGSVYYGKM-KDGKEVAVKIMADSCSHRTQQFVTEVALLSRI-HHRNLVPLIGYCEEEHQRILVYEYMH 314 (557)
Q Consensus 237 ~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~il~~l-~h~nIv~~~~~~~~~~~~~lv~e~~~ 314 (557)
|++.+.||+|+||.||+|.. .+++.||||++..... .+.+.+|+++++.+ +||||+++++++...+..++||||+
T Consensus 11 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~lv~e~~- 87 (330)
T 2izr_A 11 FRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSR--APQLHLEYRFYKQLGSGDGIPQVYYFGPCGKYNAMVLELL- 87 (330)
T ss_dssp EEEEEECCC-CTTSEEEEEETTTTEEEEEEEEETTCS--SCCHHHHHHHHHHHCSCTTSCCEEEEEEETTEEEEEEECC-
T ss_pred eEEEEEeeccCCceEEEEEECCCCcEEEEEEeccccc--hHHHHHHHHHHHHhhCCCCCCEEEEEEecCCccEEEEEeC-
Confidence 44678999999999999986 4689999999865322 34578999999999 8999999999999999999999999
Q ss_pred CCChhhhhhccCCCCCcCHHHHHHHHHHHHHHHHHHHcCCCCCeEeeccCCCCEEeCCCCc-----EEEecccCccccCC
Q 008707 315 NGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMR-----AKVSDFGLSRQAEE 389 (557)
Q Consensus 315 ~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~dlk~~NIll~~~~~-----~kl~Dfgla~~~~~ 389 (557)
+++|.+++... ...+++..++.++.|++.||+|||+ .+|+||||||+|||++.++. +||+|||++.....
T Consensus 88 ~~~L~~~~~~~--~~~~~~~~~~~i~~qi~~~l~~LH~---~~iiHrDlkp~Nill~~~~~~~~~~~kl~DFg~a~~~~~ 162 (330)
T 2izr_A 88 GPSLEDLFDLC--DRTFSLKTVLMIAIQLISRMEYVHS---KNLIYRDVKPENFLIGRPGNKTQQVIHIIDFALAKEYID 162 (330)
T ss_dssp CCBHHHHHHHT--TTCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECCGGGTCTTSEEECCCTTCEESBC
T ss_pred CCCHHHHHHHc--CCCCCHHHHHHHHHHHHHHHHHHHh---CCeeccCCCHHHeeeccCCCCCCceEEEEEcccceeeec
Confidence 99999999753 4679999999999999999999998 99999999999999998887 99999999987644
Q ss_pred CCcc------ccccccCCCCccCCcccCCCCCCcccceehhHHHHHHHHhCCCCCCCCCccccccHHHHHHHHHhcCCcc
Q 008707 390 DLTH------ISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVI 463 (557)
Q Consensus 390 ~~~~------~~~~~~g~~~y~aPE~l~~~~~s~~~DvwslG~ll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 463 (557)
.... ......||+.|+|||.+.+..++.++||||||+++|||++|+.||..............+..........
T Consensus 163 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~ 242 (330)
T 2izr_A 163 PETKKHIPYREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQGLKADTLKERYQKIGDTKRATPIE 242 (330)
T ss_dssp TTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCSSHHHHHHHHHHHHHHSCHH
T ss_pred CCCCccccccccCCcCCCccccChHHHcCCCCCchhHHHHHHHHHHHHhcCCCCccccccccHHHHHHHHHhhhccCCHH
Confidence 3221 1234569999999999999999999999999999999999999998654332222222211111110000
Q ss_pred ccccccccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhhhhh
Q 008707 464 SIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKIE 514 (557)
Q Consensus 464 ~~~d~~l~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~evl~~L~~~~~~~ 514 (557)
.+.. ..+ .+.+++.+|++.+|.+||++++|.+.|+++....
T Consensus 243 -----~~~~----~~p-~~~~li~~~l~~~p~~RP~~~~l~~~l~~~~~~~ 283 (330)
T 2izr_A 243 -----VLCE----NFP-EMATYLRYVRRLDFFEKPDYDYLRKLFTDLFDRK 283 (330)
T ss_dssp -----HHTT----TCH-HHHHHHHHHHHCCTTCCCCHHHHHHHHHHHHHHT
T ss_pred -----HHhc----cCh-HHHHHHHHHHhCCCCCCCCHHHHHHHHHHHHHHc
Confidence 0000 112 7889999999999999999999999999888754
No 44
>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...
Probab=100.00 E-value=2e-42 Score=355.95 Aligned_cols=260 Identities=27% Similarity=0.475 Sum_probs=200.2
Q ss_pred HHHHHhhcccCCCCceEEEEEEEc----CCcEEEEEEccCcc-chhHHHHHHHHHHHhhcCCCCccceeeEEEecCeeEE
Q 008707 234 EATNNFCKKIGKGSFGSVYYGKMK----DGKEVAVKIMADSC-SHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRIL 308 (557)
Q Consensus 234 ~~~~~~~~~lG~G~~g~Vy~~~~~----~~~~vavK~~~~~~-~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~l 308 (557)
...+++.+.||+|+||.||+|.+. ++..||||+++... ....+.+.+|++++++++||||+++++++.+.+..++
T Consensus 44 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 123 (373)
T 2qol_A 44 ATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMI 123 (373)
T ss_dssp GGGCCCCEEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSCEE
T ss_pred HhhceeeeEEeeCCCeEEEEEEEecCCCCceeEEEEEecCccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCceEE
Confidence 345566789999999999999875 57789999987543 3445679999999999999999999999999999999
Q ss_pred EEEecCCCChhhhhhccCCCCCcCHHHHHHHHHHHHHHHHHHHcCCCCCeEeeccCCCCEEeCCCCcEEEecccCccccC
Q 008707 309 VYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAE 388 (557)
Q Consensus 309 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfgla~~~~ 388 (557)
||||+++|+|.+++... ...+++..++.++.||++||+|||+ .+|+||||||+|||++.++.+||+|||+++...
T Consensus 124 v~e~~~~~sL~~~l~~~--~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~ 198 (373)
T 2qol_A 124 VTEYMENGSLDSFLRKH--DAQFTVIQLVGMLRGIASGMKYLSD---MGYVHRDLAARNILINSNLVCKVSDFGLGRVLE 198 (373)
T ss_dssp EEECCTTCBHHHHHHTT--TTCSCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECTTCCEEECCC-------
T ss_pred EEeCCCCCcHHHHHHhC--CCCCCHHHHHHHHHHHHHHHHHHHH---CCeeCCCCCcceEEEcCCCCEEECcCccccccc
Confidence 99999999999999742 4568999999999999999999998 999999999999999999999999999998765
Q ss_pred CCCccc--cccccCCCCccCCcccCCCCCCcccceehhHHHHHHHHh-CCCCCCCCCccccccHHHHHHHHHhcCCcccc
Q 008707 389 EDLTHI--SSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELIS-GKKPVSVEDFGAELNIVHWARSMIKKGDVISI 465 (557)
Q Consensus 389 ~~~~~~--~~~~~g~~~y~aPE~l~~~~~s~~~DvwslG~ll~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 465 (557)
...... .....+++.|+|||.+.+..++.++||||||+++|||++ |+.||....... +...+..+...
T Consensus 199 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt~g~~P~~~~~~~~-------~~~~i~~~~~~-- 269 (373)
T 2qol_A 199 DDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQD-------VIKAVDEGYRL-- 269 (373)
T ss_dssp ---------------CTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTC-CTTTTCCHHH-------HHHHHHTTEEC--
T ss_pred cCCccceeccCCCcCCCccChhhhccCCcCchhcHHHHHHHHHHHHhCCCCCCCCCCHHH-------HHHHHHcCCCC--
Confidence 432211 112235678999999999999999999999999999998 999997433211 11222222111
Q ss_pred ccccccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhhhhh
Q 008707 466 VDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKIE 514 (557)
Q Consensus 466 ~d~~l~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~evl~~L~~~~~~~ 514 (557)
......+..+.+++.+||+.||++||++.||++.|+++....
T Consensus 270 -------~~~~~~~~~l~~li~~cl~~dp~~RPs~~~i~~~L~~~~~~~ 311 (373)
T 2qol_A 270 -------PPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRNP 311 (373)
T ss_dssp -------CCCTTCBHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHCG
T ss_pred -------CCCccccHHHHHHHHHHhCcChhhCcCHHHHHHHHHHHHhCc
Confidence 111123457889999999999999999999999999998643
No 45
>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A
Probab=100.00 E-value=1e-42 Score=371.31 Aligned_cols=258 Identities=29% Similarity=0.460 Sum_probs=213.6
Q ss_pred HHHHHhhcccCCCCceEEEEEEEcC-CcEEEEEEccCccchhHHHHHHHHHHHhhcCCCCccceeeEEEecCeeEEEEEe
Q 008707 234 EATNNFCKKIGKGSFGSVYYGKMKD-GKEVAVKIMADSCSHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYEY 312 (557)
Q Consensus 234 ~~~~~~~~~lG~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~lv~e~ 312 (557)
...+++.+.||+|+||.||+|.++. +..||||++.... ...+.|.+|++++++++||||+++++++...+..++||||
T Consensus 219 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~E~ 297 (495)
T 1opk_A 219 RTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEF 297 (495)
T ss_dssp GGGEEEEEESGGGTTSSEEEEEEGGGTEEEEEEECCSSS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEEC
T ss_pred HHHceeeeEecCCCCeEEEEEEEcCCCeEEEEEEecCcc-cchHHHHHHHHHHHhcCCCCEeeEEEEEecCCcEEEEEEc
Confidence 3456678999999999999999875 8899999987543 3457899999999999999999999999999999999999
Q ss_pred cCCCChhhhhhccCCCCCcCHHHHHHHHHHHHHHHHHHHcCCCCCeEeeccCCCCEEeCCCCcEEEecccCccccCCCCc
Q 008707 313 MHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEEDLT 392 (557)
Q Consensus 313 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfgla~~~~~~~~ 392 (557)
+++|+|.+++... ....+++..++.++.||+.||+|||+ ++|+||||||+|||++.++.+||+|||+++.......
T Consensus 298 ~~~g~L~~~l~~~-~~~~~~~~~~~~i~~qi~~~L~~LH~---~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~ 373 (495)
T 1opk_A 298 MTYGNLLDYLREC-NRQEVSAVVLLYMATQISSAMEYLEK---KNFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTY 373 (495)
T ss_dssp CTTCBHHHHHHHS-CTTTSCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECGGGCEEECCTTCEECCTTCCE
T ss_pred cCCCCHHHHHHhc-CcCCCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCChhhEEECCCCcEEEeecccceeccCCce
Confidence 9999999999754 34568999999999999999999998 9999999999999999999999999999987654433
Q ss_pred cccccccCCCCccCCcccCCCCCCcccceehhHHHHHHHHh-CCCCCCCCCccccccHHHHHHHHHhcCCcccccccccc
Q 008707 393 HISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELIS-GKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPVLI 471 (557)
Q Consensus 393 ~~~~~~~g~~~y~aPE~l~~~~~s~~~DvwslG~ll~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~ 471 (557)
.......+++.|+|||.+.+..++.++||||||+++|||+| |..||...+... +.+ .+..+...
T Consensus 374 ~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlG~~l~el~t~g~~p~~~~~~~~---~~~----~~~~~~~~-------- 438 (495)
T 1opk_A 374 TAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ---VYE----LLEKDYRM-------- 438 (495)
T ss_dssp ECCTTCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCGGG---HHH----HHHTTCCC--------
T ss_pred eecCCCcCCcceeCHhHHhcCCCCcHHhHHhHHHHHHHHHhCCCCCCCCCCHHH---HHH----HHHcCCCC--------
Confidence 33333446789999999998899999999999999999999 999997544322 222 22222111
Q ss_pred CCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhhh
Q 008707 472 GNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIK 512 (557)
Q Consensus 472 ~~~~~~~~~~l~~li~~cl~~~P~~RPt~~evl~~L~~~~~ 512 (557)
..+...+..+.+++.+||+.||++|||+.||++.|+.+..
T Consensus 439 -~~~~~~~~~l~~li~~cl~~dP~~RPs~~el~~~L~~~~~ 478 (495)
T 1opk_A 439 -ERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQ 478 (495)
T ss_dssp -CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSCS
T ss_pred -CCCCCCCHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHHh
Confidence 1112233478899999999999999999999999998754
No 46
>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...
Probab=100.00 E-value=5.6e-42 Score=347.23 Aligned_cols=246 Identities=24% Similarity=0.350 Sum_probs=202.2
Q ss_pred HHhhcccCCCCceEEEEEEEc-CCcEEEEEEccCcc---chhHHHHHHHHHHHhhcCCCCccceeeEEEecCeeEEEEEe
Q 008707 237 NNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSC---SHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYEY 312 (557)
Q Consensus 237 ~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~lv~e~ 312 (557)
|++.+.||+|+||.||+|..+ +|+.||+|++.+.. ....+.+.+|+++++.++||||+++++++.+.+..++||||
T Consensus 7 y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~E~ 86 (337)
T 1o6l_A 7 FDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEY 86 (337)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred eEEEEEEecCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhCCCCcCcceEEEEEeCCEEEEEEeC
Confidence 456789999999999999876 58999999986532 23456788999999999999999999999999999999999
Q ss_pred cCCCChhhhhhccCCCCCcCHHHHHHHHHHHHHHHHHHHcCCCCCeEeeccCCCCEEeCCCCcEEEecccCccccCCCCc
Q 008707 313 MHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEEDLT 392 (557)
Q Consensus 313 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfgla~~~~~~~~ 392 (557)
+++|+|.+++.. ...+++..+..++.||+.||+|||+ ++|+||||||+|||++.++.+||+|||+++.......
T Consensus 87 ~~gg~L~~~l~~---~~~~~~~~~~~~~~qi~~aL~~LH~---~~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~~ 160 (337)
T 1o6l_A 87 ANGGELFFHLSR---ERVFTEERARFYGAEIVSALEYLHS---RDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGA 160 (337)
T ss_dssp CTTCBHHHHHHH---HSCCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCCGGGEEECTTSCEEECCCTTCBCSCCTTC
T ss_pred CCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHH---CCeecCcCCHHHEEECCCCCEEEeeccchhhcccCCC
Confidence 999999999874 3568999999999999999999998 9999999999999999999999999999986433222
Q ss_pred cccccccCCCCccCCcccCCCCCCcccceehhHHHHHHHHhCCCCCCCCCccccccHHHHHHHHHhcCCccccccccccC
Q 008707 393 HISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPVLIG 472 (557)
Q Consensus 393 ~~~~~~~g~~~y~aPE~l~~~~~s~~~DvwslG~ll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~ 472 (557)
......||+.|+|||++.+..++.++||||||+++|||++|+.||...+.. +... .+..+... +
T Consensus 161 -~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~------~~~~-~i~~~~~~------~-- 224 (337)
T 1o6l_A 161 -TMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE------RLFE-LILMEEIR------F-- 224 (337)
T ss_dssp -CBCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHH------HHHH-HHHHCCCC------C--
T ss_pred -cccccccChhhCChhhhcCCCCCchhhcccchhHHHHHhcCCCCCCCCCHH------HHHH-HHHcCCCC------C--
Confidence 223456899999999999999999999999999999999999999744321 1111 11112110 1
Q ss_pred CCCHHHHHHHHHHHHHccccCCCCCC-----CHHHHHHH
Q 008707 473 NVKIESIWRIAEVAIQCVEQRGFSRP-----KMQEIVLA 506 (557)
Q Consensus 473 ~~~~~~~~~l~~li~~cl~~~P~~RP-----t~~evl~~ 506 (557)
+......+.+++.+||+.||++|| +++||++.
T Consensus 225 --p~~~s~~~~~li~~lL~~dP~~R~g~~~~~~~ei~~h 261 (337)
T 1o6l_A 225 --PRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEH 261 (337)
T ss_dssp --CTTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHTS
T ss_pred --CCCCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHHcC
Confidence 111234688999999999999999 89999764
No 47
>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*
Probab=100.00 E-value=3.2e-42 Score=340.54 Aligned_cols=259 Identities=25% Similarity=0.400 Sum_probs=198.9
Q ss_pred HHHHhhcccCCCCceEEEEEEEcC----CcEEEEEEccCcc-chhHHHHHHHHHHHhhcCCCCccceeeEEEecCeeEEE
Q 008707 235 ATNNFCKKIGKGSFGSVYYGKMKD----GKEVAVKIMADSC-SHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILV 309 (557)
Q Consensus 235 ~~~~~~~~lG~G~~g~Vy~~~~~~----~~~vavK~~~~~~-~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~lv 309 (557)
..|++.+.||+|+||.||+|.+.. +..||+|++.... ....+.+.+|+.+++.++||||+++++++. ++..++|
T Consensus 15 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~lv 93 (281)
T 1mp8_A 15 ERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENPVWII 93 (281)
T ss_dssp GGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEC-SSSCEEE
T ss_pred HHeEEEeEeeecCCeeEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCccceEEEEEc-cCccEEE
Confidence 455678999999999999998753 4579999987543 334567899999999999999999999985 4568999
Q ss_pred EEecCCCChhhhhhccCCCCCcCHHHHHHHHHHHHHHHHHHHcCCCCCeEeeccCCCCEEeCCCCcEEEecccCccccCC
Q 008707 310 YEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEE 389 (557)
Q Consensus 310 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfgla~~~~~ 389 (557)
|||+++++|.+++... ...+++..++.++.|++.||+|||+ .+++||||||+||+++.++.+||+|||++.....
T Consensus 94 ~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~ 168 (281)
T 1mp8_A 94 MELCTLGELRSFLQVR--KYSLDLASLILYAYQLSTALAYLES---KRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMED 168 (281)
T ss_dssp EECCTTEEHHHHHHHT--TTTSCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEEEETTEEEECC---------
T ss_pred EecCCCCCHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHh---CCeecccccHHHEEECCCCCEEECccccccccCc
Confidence 9999999999999753 4568999999999999999999998 9999999999999999999999999999987654
Q ss_pred CCccccccccCCCCccCCcccCCCCCCcccceehhHHHHHHHHh-CCCCCCCCCccccccHHHHHHHHHhcCCccccccc
Q 008707 390 DLTHISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELIS-GKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDP 468 (557)
Q Consensus 390 ~~~~~~~~~~g~~~y~aPE~l~~~~~s~~~DvwslG~ll~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 468 (557)
..........+++.|+|||.+.+..++.++||||||+++|||++ |..||......+ ... .+..+....
T Consensus 169 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~pf~~~~~~~---~~~----~i~~~~~~~---- 237 (281)
T 1mp8_A 169 STYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNND---VIG----RIENGERLP---- 237 (281)
T ss_dssp ----------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCGGG---HHH----HHHTTCCCC----
T ss_pred ccccccccCCCcccccChhhcccCCCCCccCchHHHHHHHHHHhcCCCCCCcCCHHH---HHH----HHHcCCCCC----
Confidence 43333333446789999999998899999999999999999997 999997543322 111 122222111
Q ss_pred cccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhhhhhc
Q 008707 469 VLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKIEK 515 (557)
Q Consensus 469 ~l~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~evl~~L~~~~~~~~ 515 (557)
.+...+..+.+++.+||+.||++|||+.||++.|+++.+.+.
T Consensus 238 -----~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~~~ 279 (281)
T 1mp8_A 238 -----MPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTILEEEK 279 (281)
T ss_dssp -----CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHH
T ss_pred -----CCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHHhc
Confidence 111223478899999999999999999999999999987653
No 48
>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*
Probab=100.00 E-value=6.1e-42 Score=343.70 Aligned_cols=259 Identities=22% Similarity=0.281 Sum_probs=199.3
Q ss_pred HHhhcccCCCCceEEEEEEEcCCcEEEEEEccCccc--hhHHHHHHHHHHHhhcCCCCccceeeEEEecCeeEEEEEecC
Q 008707 237 NNFCKKIGKGSFGSVYYGKMKDGKEVAVKIMADSCS--HRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYEYMH 314 (557)
Q Consensus 237 ~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~lv~e~~~ 314 (557)
|++.+.||+|+||+||+|.+.+|+.||+|++..... ...+.+.+|+++++.++||||+++++++.+.+..++||||++
T Consensus 23 y~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~ 102 (311)
T 3niz_A 23 YQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVIHSERCLTLVFEFME 102 (311)
T ss_dssp EEEEEEEEECSSCEEEEEEETTSCEEEEEEEC------CHHHHHHHHHHHHHHCCCTTBCCEEEEECCSSCEEEEEECCS
T ss_pred hHhhhhccCCCCeEEEEEEECCCCEEEEEEEecccccchhhHHHHHHHHHHHHcCCCCEeeeeeEEccCCEEEEEEcCCC
Confidence 456789999999999999998899999999864322 234678899999999999999999999999999999999997
Q ss_pred CCChhhhhhccCCCCCcCHHHHHHHHHHHHHHHHHHHcCCCCCeEeeccCCCCEEeCCCCcEEEecccCccccCCCCccc
Q 008707 315 NGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEEDLTHI 394 (557)
Q Consensus 315 ~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfgla~~~~~~~~~~ 394 (557)
++|.+.+.. ....+++..+..++.|++.||+|||+ .+|+||||||+|||++.++.+||+|||++.........
T Consensus 103 -~~l~~~~~~--~~~~~~~~~~~~~~~qi~~~l~~LH~---~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~~~- 175 (311)
T 3niz_A 103 -KDLKKVLDE--NKTGLQDSQIKIYLYQLLRGVAHCHQ---HRILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRS- 175 (311)
T ss_dssp -EEHHHHHHT--CTTCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTCCEEECCCTTCEETTSCCC--
T ss_pred -CCHHHHHHh--ccCCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCchHhEEECCCCCEEEccCcCceecCCCccc-
Confidence 588887764 34568999999999999999999998 99999999999999999999999999999876543222
Q ss_pred cccccCCCCccCCcccCC-CCCCcccceehhHHHHHHHHhCCCCCCCCCccccccHHHHHHHHHhcCCcccc--------
Q 008707 395 SSVARGTVGYLDPEYYGN-QQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISI-------- 465 (557)
Q Consensus 395 ~~~~~g~~~y~aPE~l~~-~~~s~~~DvwslG~ll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~-------- 465 (557)
.....||+.|+|||.+.+ ..++.++||||+||++|+|++|+.||.+....+. ...+............
T Consensus 176 ~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~---~~~i~~~~~~~~~~~~~~~~~~~~ 252 (311)
T 3niz_A 176 YTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQ---LPKIFSILGTPNPREWPQVQELPL 252 (311)
T ss_dssp --CCCCCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSTTTH---HHHHHHHHCCCCTTTSGGGTTSHH
T ss_pred ccCCcccCCcCCHHHhcCCCCCCchHHhHHHHHHHHHHHhCCCCCCCCChHHH---HHHHHHHHCCCChHHhhhhhccch
Confidence 223458999999999876 5689999999999999999999999985543322 1112222211110000
Q ss_pred --------ccccccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 008707 466 --------VDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 505 (557)
Q Consensus 466 --------~d~~l~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~evl~ 505 (557)
.+.............++.+++.+||+.||++|||++|+++
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 300 (311)
T 3niz_A 253 WKQRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMN 300 (311)
T ss_dssp HHSCCCCCCCCCCHHHHSTTCCHHHHHHHHHHSCSCTTTSCCHHHHHT
T ss_pred hhhcccccccCCcHHHhCcccCHHHHHHHHHHcCCChhHCCCHHHHhc
Confidence 0000000000112246789999999999999999999985
No 49
>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*
Probab=100.00 E-value=1.9e-41 Score=346.46 Aligned_cols=249 Identities=24% Similarity=0.320 Sum_probs=203.1
Q ss_pred HHHhhcccCCCCceEEEEEEEc-CCcEEEEEEccCccch------hHHHHHHHHHHHhhcCCCCccceeeEEEecCeeEE
Q 008707 236 TNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCSH------RTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRIL 308 (557)
Q Consensus 236 ~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~------~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~l 308 (557)
.|++.+.||+|+||.||+|..+ +|+.||+|++...... ..+.+.+|+.+++.++||||+++++++.+.+..++
T Consensus 13 ~y~~~~~LG~G~fg~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~l 92 (361)
T 2yab_A 13 FYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIITLHDVYENRTDVVL 92 (361)
T ss_dssp TEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEE
T ss_pred ceEEeeEEeeCcCEEEEEEEECCCCCEEEEEEEEccccccccchhHHHHHHHHHHHHHhCCCcCCCcEEEEEEeCCEEEE
Confidence 3556789999999999999876 5899999998654321 34678999999999999999999999999999999
Q ss_pred EEEecCCCChhhhhhccCCCCCcCHHHHHHHHHHHHHHHHHHHcCCCCCeEeeccCCCCEEeCCCC----cEEEecccCc
Q 008707 309 VYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINM----RAKVSDFGLS 384 (557)
Q Consensus 309 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~dlk~~NIll~~~~----~~kl~Dfgla 384 (557)
||||+++|+|.+++.. ...+++..+..++.||+.||+|||+ .||+||||||+||+++.++ .+||+|||++
T Consensus 93 v~e~~~gg~L~~~l~~---~~~l~~~~~~~i~~qi~~aL~~LH~---~givHrDlkp~NIll~~~~~~~~~vkl~DFG~a 166 (361)
T 2yab_A 93 ILELVSGGELFDFLAQ---KESLSEEEATSFIKQILDGVNYLHT---KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLA 166 (361)
T ss_dssp EEECCCSCBHHHHHTT---CSCCBHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEESCTTSSSCCEEECCCSSC
T ss_pred EEEcCCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEEEeCCCCCccCEEEEecCCc
Confidence 9999999999999973 4578999999999999999999998 9999999999999998776 7999999999
Q ss_pred cccCCCCccccccccCCCCccCCcccCCCCCCcccceehhHHHHHHHHhCCCCCCCCCccccccHHHHHHHHHhcCCccc
Q 008707 385 RQAEEDLTHISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVIS 464 (557)
Q Consensus 385 ~~~~~~~~~~~~~~~g~~~y~aPE~l~~~~~s~~~DvwslG~ll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 464 (557)
........ .....||+.|+|||++.+..++.++||||||+++|+|++|..||.+.+... .. ..+..+...
T Consensus 167 ~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~Pf~~~~~~~------~~-~~i~~~~~~- 236 (361)
T 2yab_A 167 HEIEDGVE--FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQE------TL-ANITAVSYD- 236 (361)
T ss_dssp EECCTTCC--CCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHH------HH-HHHHTTCCC-
T ss_pred eEcCCCCc--cccCCCCccEECchHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCHHH------HH-HHHHhcCCC-
Confidence 87654322 233459999999999999999999999999999999999999997543211 11 112222110
Q ss_pred cccccccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 008707 465 IVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 505 (557)
Q Consensus 465 ~~d~~l~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~evl~ 505 (557)
+++..... ....+.+++.+||..||++|||+.|+++
T Consensus 237 -~~~~~~~~----~s~~~~~li~~~L~~dP~~R~t~~e~l~ 272 (361)
T 2yab_A 237 -FDEEFFSQ----TSELAKDFIRKLLVKETRKRLTIQEALR 272 (361)
T ss_dssp -CCHHHHTT----SCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred -CCchhccC----CCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 01111111 1236889999999999999999999985
No 50
>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B
Probab=100.00 E-value=1.2e-41 Score=348.67 Aligned_cols=255 Identities=23% Similarity=0.317 Sum_probs=206.2
Q ss_pred HHHHHHHHhhcccCCCCceEEEEEEEc-CCcEEEEEEccCcc--chhHHHHHHHHHHHhhcCCCCccceeeEEEecCeeE
Q 008707 231 ELEEATNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSC--SHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRI 307 (557)
Q Consensus 231 ~~~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~ 307 (557)
......|++.+.||+|+||.||+|..+ +|+.||+|++.... ....+.+.+|+++++.++||||+++++++.+.+..+
T Consensus 25 ~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~ 104 (362)
T 2bdw_A 25 TKFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHY 104 (362)
T ss_dssp CHHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred CCcccCeEEeeEEecCCCeEEEEEEECCCCCEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEE
Confidence 344567788999999999999999876 58999999986532 334567889999999999999999999999999999
Q ss_pred EEEEecCCCChhhhhhccCCCCCcCHHHHHHHHHHHHHHHHHHHcCCCCCeEeeccCCCCEEeCCC---CcEEEecccCc
Q 008707 308 LVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDIN---MRAKVSDFGLS 384 (557)
Q Consensus 308 lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~dlk~~NIll~~~---~~~kl~Dfgla 384 (557)
+||||+++|+|.+.+.. ...+++..+..++.||+.||+|||+ .+|+||||||+|||++.+ +.+||+|||++
T Consensus 105 lv~e~~~gg~L~~~l~~---~~~~~~~~~~~~~~qi~~al~~lH~---~~ivH~Dlkp~NIll~~~~~~~~~kl~DfG~a 178 (362)
T 2bdw_A 105 LVFDLVTGGELFEDIVA---REFYSEADASHCIQQILESIAYCHS---NGIVHRNLKPENLLLASKAKGAAVKLADFGLA 178 (362)
T ss_dssp EEECCCCSCBHHHHHTT---CSCCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCSGGGEEESCSSTTCCEEECCCTTC
T ss_pred EEEecCCCCCHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHH---CCeEeccCchHHEEEecCCCCCCEEEeecCcc
Confidence 99999999999998873 4568999999999999999999998 999999999999999865 45999999999
Q ss_pred cccCCCCccccccccCCCCccCCcccCCCCCCcccceehhHHHHHHHHhCCCCCCCCCccccccHHHHHHHHHhcCCccc
Q 008707 385 RQAEEDLTHISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVIS 464 (557)
Q Consensus 385 ~~~~~~~~~~~~~~~g~~~y~aPE~l~~~~~s~~~DvwslG~ll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 464 (557)
........ .....||+.|+|||++.+..++.++|||||||++|+|++|+.||...+.. . ....+..+....
T Consensus 179 ~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~------~-~~~~i~~~~~~~ 249 (362)
T 2bdw_A 179 IEVNDSEA--WHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQH------R-LYAQIKAGAYDY 249 (362)
T ss_dssp BCCTTCCS--CCCSCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH------H-HHHHHHHTCCCC
T ss_pred eEecCCcc--cccCCCCccccCHHHHccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHH------H-HHHHHHhCCCCC
Confidence 87654322 22346899999999999999999999999999999999999999744321 1 111222222110
Q ss_pred cccccccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 008707 465 IVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLA 506 (557)
Q Consensus 465 ~~d~~l~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~evl~~ 506 (557)
..+ .. ...+..+.+++.+||+.||++|||+.|+++.
T Consensus 250 -~~~-~~----~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 285 (362)
T 2bdw_A 250 -PSP-EW----DTVTPEAKSLIDSMLTVNPKKRITADQALKV 285 (362)
T ss_dssp -CTT-GG----GGSCHHHHHHHHHHSCSSGGGSCCHHHHTTS
T ss_pred -Ccc-cc----cCCCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 000 00 1123468899999999999999999999864
No 51
>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A
Probab=100.00 E-value=9.8e-42 Score=359.57 Aligned_cols=252 Identities=30% Similarity=0.493 Sum_probs=207.0
Q ss_pred HHHhhcccCCCCceEEEEEEEcCCcEEEEEEccCccchhHHHHHHHHHHHhhcCCCCccceeeEEEecC-eeEEEEEecC
Q 008707 236 TNNFCKKIGKGSFGSVYYGKMKDGKEVAVKIMADSCSHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEH-QRILVYEYMH 314 (557)
Q Consensus 236 ~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~-~~~lv~e~~~ 314 (557)
.+++.+.||+|+||.||+|.+. ++.||||+++... ..+.+.+|++++++++||||+++++++.... ..++||||++
T Consensus 194 ~~~~~~~lG~G~fg~V~~~~~~-~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~iv~e~~~ 270 (450)
T 1k9a_A 194 ELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMA 270 (450)
T ss_dssp GEEEEEEEEECSSEEEEEEEET-TEEEEEEEESSCT--TSHHHHHHHHHHHTCCCTTBCCEEEEEECTTSCEEEEEECCT
T ss_pred HeEEEeeecCcCCeeEEEEEec-CCeEEEEEeCCch--HHHHHHHHHHHHHhccCCCEEEEEEEEEcCCCceEEEEEecC
Confidence 4456789999999999999987 7899999997643 4577999999999999999999999987655 7899999999
Q ss_pred CCChhhhhhccCCCCCcCHHHHHHHHHHHHHHHHHHHcCCCCCeEeeccCCCCEEeCCCCcEEEecccCccccCCCCccc
Q 008707 315 NGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEEDLTHI 394 (557)
Q Consensus 315 ~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfgla~~~~~~~~~~ 394 (557)
+|+|.+++... ....+++..++.++.||+.||+|||+ ++++||||||+|||++.++.+||+|||+++......
T Consensus 271 ~g~L~~~l~~~-~~~~~~~~~~~~~~~qi~~~l~~LH~---~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~--- 343 (450)
T 1k9a_A 271 KGSLVDYLRSR-GRSVLGGDCLLKFSLDVCEAMEYLEG---NNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQ--- 343 (450)
T ss_dssp TCBHHHHHHHH-CTTTCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGGGEEECTTSCEEECCCTTCEECC------
T ss_pred CCcHHHHHHhc-CCCCCCHHHHHHHHHHHHHHHHHHHh---CCeeCCCCCHhhEEECCCCCEEEeeCCCcccccccc---
Confidence 99999999854 23447899999999999999999998 999999999999999999999999999998653321
Q ss_pred cccccCCCCccCCcccCCCCCCcccceehhHHHHHHHHh-CCCCCCCCCccccccHHHHHHHHHhcCCccccccccccCC
Q 008707 395 SSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELIS-GKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPVLIGN 473 (557)
Q Consensus 395 ~~~~~g~~~y~aPE~l~~~~~s~~~DvwslG~ll~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~ 473 (557)
....+++.|+|||.+.+..++.++||||||+++|||+| |+.||......+ .. ..+..+....
T Consensus 344 -~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~~---~~----~~i~~~~~~~--------- 406 (450)
T 1k9a_A 344 -DTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKD---VV----PRVEKGYKMD--------- 406 (450)
T ss_dssp ----CCCTTTSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTTCCSSTTSCTTT---HH----HHHHTTCCCC---------
T ss_pred -cCCCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHH---HH----HHHHcCCCCC---------
Confidence 12246889999999999999999999999999999999 999997543322 11 2222332111
Q ss_pred CCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhhhhh
Q 008707 474 VKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKIE 514 (557)
Q Consensus 474 ~~~~~~~~l~~li~~cl~~~P~~RPt~~evl~~L~~~~~~~ 514 (557)
.+...+..+.+++.+||+.||++|||+.||++.|+++...+
T Consensus 407 ~p~~~~~~l~~li~~cl~~dp~~Rpt~~~l~~~L~~i~~~~ 447 (450)
T 1k9a_A 407 APDGCPPAVYDVMKNCWHLDAATRPTFLQLREQLEHIRTHE 447 (450)
T ss_dssp CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHTT
T ss_pred CCCcCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHHhh
Confidence 11223457889999999999999999999999999987653
No 52
>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00 E-value=3.6e-42 Score=337.16 Aligned_cols=255 Identities=28% Similarity=0.449 Sum_probs=210.3
Q ss_pred HHHhhcccCCCCceEEEEEEEcCCcEEEEEEccCccchhHHHHHHHHHHHhhcCCCCccceeeEEEecCeeEEEEEecCC
Q 008707 236 TNNFCKKIGKGSFGSVYYGKMKDGKEVAVKIMADSCSHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYEYMHN 315 (557)
Q Consensus 236 ~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~lv~e~~~~ 315 (557)
.|++.+.||+|+||.||+|.+.+++.||+|++..... ..+.+.+|+++++.++||||+++++++.+.+..++||||+++
T Consensus 9 ~y~~~~~lg~G~~g~V~~~~~~~~~~vaiK~~~~~~~-~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~ 87 (267)
T 3t9t_A 9 ELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAM-SEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVTEFMEH 87 (267)
T ss_dssp GEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTTB-CHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSCEEEECCCTT
T ss_pred heeeeeEecCCCceeEEEEEecCCCeEEEEEccccCC-CHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCeEEEEeCCCC
Confidence 3456789999999999999998889999999876433 346789999999999999999999999999999999999999
Q ss_pred CChhhhhhccCCCCCcCHHHHHHHHHHHHHHHHHHHcCCCCCeEeeccCCCCEEeCCCCcEEEecccCccccCCCCcccc
Q 008707 316 GTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEEDLTHIS 395 (557)
Q Consensus 316 gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfgla~~~~~~~~~~~ 395 (557)
++|.+++... ...+++..+..++.|++.||+|||+ .+++||||||+||+++.++.+||+|||++...........
T Consensus 88 ~~L~~~~~~~--~~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~~~~ 162 (267)
T 3t9t_A 88 GCLSDYLRTQ--RGLFAAETLLGMCLDVCEGMAYLEE---ACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSS 162 (267)
T ss_dssp CBHHHHHHHT--TTCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSSCCGGGEEECGGGCEEECCTTGGGGBCCHHHHST
T ss_pred CcHHHHHhhC--cccCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCchheEEECCCCCEEEccccccccccccccccc
Confidence 9999999753 4568999999999999999999998 9999999999999999999999999999987644322222
Q ss_pred ccccCCCCccCCcccCCCCCCcccceehhHHHHHHHHh-CCCCCCCCCccccccHHHHHHHHHhcCCccccccccccCCC
Q 008707 396 SVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELIS-GKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPVLIGNV 474 (557)
Q Consensus 396 ~~~~g~~~y~aPE~l~~~~~s~~~DvwslG~ll~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~ 474 (557)
....+++.|+|||.+.+..++.++||||||+++|+|++ |+.||...+.. +.. ..+..+.... .
T Consensus 163 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~------~~~-~~i~~~~~~~--~------- 226 (267)
T 3t9t_A 163 TGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNS------EVV-EDISTGFRLY--K------- 226 (267)
T ss_dssp TSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHH------HHH-HHHHTTCCCC--C-------
T ss_pred ccccccccccChhhhcCCCccchhchhhhHHHHHHHhccCCCCCCCCCHH------HHH-HHHhcCCcCC--C-------
Confidence 33446788999999998889999999999999999999 89999743321 111 1222221110 0
Q ss_pred CHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhhh
Q 008707 475 KIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIK 512 (557)
Q Consensus 475 ~~~~~~~l~~li~~cl~~~P~~RPt~~evl~~L~~~~~ 512 (557)
+...+..+.+++.+||+.+|++|||++|+++.|+++.+
T Consensus 227 ~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~l~~ 264 (267)
T 3t9t_A 227 PRLASTHVYQIMNHCWRERPEDRPAFSRLLRQLAEIAE 264 (267)
T ss_dssp CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred CccCcHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence 11123468899999999999999999999999999876
No 53
>3lb7_A RAF proto-oncogene serine/threonine-protein kinas; kinase domain, alternative splicing, ATP-binding, disease MU kinase, metal-binding; 4.00A {Homo sapiens} PDB: 3omv_A*
Probab=100.00 E-value=8.6e-42 Score=341.90 Aligned_cols=264 Identities=30% Similarity=0.486 Sum_probs=204.3
Q ss_pred HHHHHHHhhcccCCCCceEEEEEEEcCCcEEEEEEccCc--cchhHHHHHHHHHHHhhcCCCCccceeeEEEecCeeEEE
Q 008707 232 LEEATNNFCKKIGKGSFGSVYYGKMKDGKEVAVKIMADS--CSHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILV 309 (557)
Q Consensus 232 ~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~lv 309 (557)
+....|.+.+.||+|+||.||+|.+. ..+|+|+++.. .....+.+.+|+++++.++||||+++++++.. +..++|
T Consensus 33 i~~~~~~~~~~lG~G~~g~Vy~~~~~--~~~avk~~k~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-~~~~lv 109 (307)
T 3lb7_A 33 IEASEVMLSTRIGSGSFGTVYKGKWH--GDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTK-DNLAIV 109 (307)
T ss_dssp CCTTSCCEEEEEEECSSCEEEEEESS--SEEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS-SSCEEE
T ss_pred ecccceEEEeEecCCCCeEEEEEEEC--CEEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEcc-CcEEEE
Confidence 34455667899999999999999875 35889887643 23445779999999999999999999998754 558999
Q ss_pred EEecCCCChhhhhhccCCCCCcCHHHHHHHHHHHHHHHHHHHcCCCCCeEeeccCCCCEEeCCCCcEEEecccCccccCC
Q 008707 310 YEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEE 389 (557)
Q Consensus 310 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfgla~~~~~ 389 (557)
|||+++++|.+++... ...+++..++.++.||+.||+|||+ .+|+||||||+||+++.++.+||+|||++.....
T Consensus 110 ~e~~~~~~L~~~l~~~--~~~~~~~~~~~i~~qi~~~L~~LH~---~~ivH~Dlkp~NIll~~~~~~kl~DFg~a~~~~~ 184 (307)
T 3lb7_A 110 TQWCEGSSLYKHLHVQ--ETKFQMFQLIDIARQTAQGMDYLHA---KNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSR 184 (307)
T ss_dssp EECCSSCBHHHHHHTS--CCCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCSSSEEECTTSCEEECCCCSSCC---
T ss_pred EecCCCCcHHHHHHhc--ccCCCHHHHHHHHHHHHHHHHHHHh---CCEeeCCCChhhEEEcCCCCEEEccCCCceeccc
Confidence 9999999999999743 5678999999999999999999998 9999999999999999999999999999986543
Q ss_pred C-CccccccccCCCCccCCcccC---CCCCCcccceehhHHHHHHHHhCCCCCCCCCccccccHHHHHHHHHhcCCcccc
Q 008707 390 D-LTHISSVARGTVGYLDPEYYG---NQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISI 465 (557)
Q Consensus 390 ~-~~~~~~~~~g~~~y~aPE~l~---~~~~s~~~DvwslG~ll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 465 (557)
. .........||+.|+|||.+. +..++.++||||||+++|||++|+.||......+. . ...+..+.....
T Consensus 185 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~elltg~~Pf~~~~~~~~--~----~~~~~~~~~~~~ 258 (307)
T 3lb7_A 185 WSGSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQ--I----IFMVGRGYASPD 258 (307)
T ss_dssp ---------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHH--H----HHHHHHTCCCCC
T ss_pred ccccccccCCCCCcceECcceeeccCCCCCCchhhHHHHHHHHHHHHhCCCCCccCCcHHH--H----HHHHhcCCCCcc
Confidence 1 122223346899999999986 56788999999999999999999999974432211 1 111222211111
Q ss_pred ccccccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhhhhh
Q 008707 466 VDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKIE 514 (557)
Q Consensus 466 ~d~~l~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~evl~~L~~~~~~~ 514 (557)
+. ......+..+.+++.+||+.+|++|||+.||++.|+.+....
T Consensus 259 ~~-----~~~~~~~~~l~~li~~~l~~~p~~RPs~~~il~~l~~l~~~~ 302 (307)
T 3lb7_A 259 LS-----KLYKNCPKAMKRLVADCVKKVKEERPLFPQILSSIELLQHSL 302 (307)
T ss_dssp ST-----TSCSSSCHHHHHHHHHHSCSSSTTSCCHHHHHHHHHHHHTTC
T ss_pred hh-----hhhcCCcHHHHHHHHHHhhCChhhCcCHHHHHHHHHHHHhhc
Confidence 10 111122347889999999999999999999999999887654
No 54
>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*
Probab=100.00 E-value=3.5e-42 Score=345.49 Aligned_cols=260 Identities=26% Similarity=0.429 Sum_probs=211.6
Q ss_pred HHHHhhcccCCCCceEEEEEEEc------CCcEEEEEEccCcc-chhHHHHHHHHHHHhhcCCCCccceeeEEEecCeeE
Q 008707 235 ATNNFCKKIGKGSFGSVYYGKMK------DGKEVAVKIMADSC-SHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRI 307 (557)
Q Consensus 235 ~~~~~~~~lG~G~~g~Vy~~~~~------~~~~vavK~~~~~~-~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~ 307 (557)
..|.+.+.||+|+||.||+|... +++.||+|++.... ....+.+.+|+++++.++||||+++++++.+.+..+
T Consensus 23 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~ 102 (314)
T 2ivs_A 23 KNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLL 102 (314)
T ss_dssp GGEEEEEEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSCE
T ss_pred hheeeeeeecccCCeeEEEEEEeccCcccCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCceeeEEEEEecCCceE
Confidence 44566899999999999999862 35789999987543 344577899999999999999999999999999999
Q ss_pred EEEEecCCCChhhhhhccCC---------------------CCCcCHHHHHHHHHHHHHHHHHHHcCCCCCeEeeccCCC
Q 008707 308 LVYEYMHNGTLRDRLHGSVN---------------------QKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSS 366 (557)
Q Consensus 308 lv~e~~~~gsL~~~l~~~~~---------------------~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~dlk~~ 366 (557)
+||||+++++|.+++..... ...+++..++.++.||++||+|||+ ++++||||||+
T Consensus 103 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~---~~ivH~dikp~ 179 (314)
T 2ivs_A 103 LIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAE---MKLVHRDLAAR 179 (314)
T ss_dssp EEEECCTTCBHHHHHHHTTTSTTEEC----------------CEECHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGG
T ss_pred EEEeecCCCCHHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHHHHHHHHHHHH---CCCcccccchh
Confidence 99999999999999975432 2348999999999999999999998 99999999999
Q ss_pred CEEeCCCCcEEEecccCccccCCCCcc-ccccccCCCCccCCcccCCCCCCcccceehhHHHHHHHHh-CCCCCCCCCcc
Q 008707 367 NILLDINMRAKVSDFGLSRQAEEDLTH-ISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELIS-GKKPVSVEDFG 444 (557)
Q Consensus 367 NIll~~~~~~kl~Dfgla~~~~~~~~~-~~~~~~g~~~y~aPE~l~~~~~s~~~DvwslG~ll~ellt-g~~pf~~~~~~ 444 (557)
||+++.++.+||+|||++......... ......+++.|+|||.+.+..++.++||||||+++|+|++ |..||......
T Consensus 180 NIli~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~ 259 (314)
T 2ivs_A 180 NILVAEGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPPE 259 (314)
T ss_dssp GEEEETTTEEEECCCTTCEECTTTSCEECSSCCCSCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCGG
T ss_pred eEEEcCCCCEEEccccccccccccccceeccCCCCcccccChhhhcCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCCHH
Confidence 999999999999999999876443322 2233446788999999998889999999999999999999 99999754432
Q ss_pred ccccHHHHHHHHHhcCCccccccccccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhhhh
Q 008707 445 AELNIVHWARSMIKKGDVISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKI 513 (557)
Q Consensus 445 ~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~evl~~L~~~~~~ 513 (557)
. +. ..+..+.... .+...+..+.+++.+||+.||++|||+.||++.|+++...
T Consensus 260 ~---~~----~~~~~~~~~~---------~~~~~~~~~~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~ 312 (314)
T 2ivs_A 260 R---LF----NLLKTGHRME---------RPDNCSEEMYRLMLQCWKQEPDKRPVFADISKDLEKMMVK 312 (314)
T ss_dssp G---HH----HHHHTTCCCC---------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHT
T ss_pred H---HH----HHhhcCCcCC---------CCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhh
Confidence 2 11 1222222111 1112234788999999999999999999999999998764
No 55
>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...
Probab=100.00 E-value=2.6e-42 Score=342.12 Aligned_cols=261 Identities=29% Similarity=0.462 Sum_probs=215.9
Q ss_pred HHHHHHhhcccCCCCceEEEEEEEcC-CcEEEEEEccCccchhHHHHHHHHHHHhhcCCCCccceeeEEEecCeeEEEEE
Q 008707 233 EEATNNFCKKIGKGSFGSVYYGKMKD-GKEVAVKIMADSCSHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYE 311 (557)
Q Consensus 233 ~~~~~~~~~~lG~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~lv~e 311 (557)
....+++.+.||+|+||.||+|.+.. +..||+|++... ....+.+.+|+++++.++||||+++++++.+.+..++|||
T Consensus 11 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e 89 (288)
T 3kfa_A 11 ERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED-TMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITE 89 (288)
T ss_dssp CGGGEEEEEESGGGTTCSEEEEEEGGGTEEEEEEEECSC-STHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEEE
T ss_pred cccceeEEeecCCCCceeEEEeEecCCCEEEEEEecCcC-HHHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCEEEEEE
Confidence 34456678999999999999998874 889999998754 3345778999999999999999999999999999999999
Q ss_pred ecCCCChhhhhhccCCCCCcCHHHHHHHHHHHHHHHHHHHcCCCCCeEeeccCCCCEEeCCCCcEEEecccCccccCCCC
Q 008707 312 YMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEEDL 391 (557)
Q Consensus 312 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfgla~~~~~~~ 391 (557)
|+++++|.+++... ....+++..++.++.|++.||+|||+ .+++||||||+||+++.++.++|+|||++.......
T Consensus 90 ~~~~~~L~~~~~~~-~~~~~~~~~~~~i~~~i~~~l~~lH~---~~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~ 165 (288)
T 3kfa_A 90 FMTYGNLLDYLREC-NRQEVSAVVLLYMATQISSAMEYLEK---KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDT 165 (288)
T ss_dssp CCTTEEHHHHHHHC-CTTTSCHHHHHHHHHHHHHHHHHHHH---HTCCCSCCSGGGEEECGGGCEEECCCCGGGTSCSSS
T ss_pred cCCCCcHHHHHHhc-ccCCccHhHHHHHHHHHHHHHHHHHH---CCccCCCCCcceEEEcCCCCEEEccCccceeccCCc
Confidence 99999999999754 34568999999999999999999998 999999999999999999999999999998776554
Q ss_pred ccccccccCCCCccCCcccCCCCCCcccceehhHHHHHHHHh-CCCCCCCCCccccccHHHHHHHHHhcCCccccccccc
Q 008707 392 THISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELIS-GKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPVL 470 (557)
Q Consensus 392 ~~~~~~~~g~~~y~aPE~l~~~~~s~~~DvwslG~ll~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l 470 (557)
........+++.|+|||.+.+..++.++||||||+++|+|++ |..||...+... ..+ .+..+...
T Consensus 166 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~~g~~p~~~~~~~~---~~~----~~~~~~~~------- 231 (288)
T 3kfa_A 166 YTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ---VYE----LLEKDYRM------- 231 (288)
T ss_dssp SEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGG---HHH----HHHTTCCC-------
T ss_pred cccccCCccccCcCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHH---HHH----HHhccCCC-------
Confidence 444444457889999999998899999999999999999999 999997544322 111 11111111
Q ss_pred cCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhhhhh
Q 008707 471 IGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKIE 514 (557)
Q Consensus 471 ~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~evl~~L~~~~~~~ 514 (557)
..+...+..+.+++.+|+..||++|||++||++.|+.+....
T Consensus 232 --~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~~~~l~~~~~~~ 273 (288)
T 3kfa_A 232 --ERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQES 273 (288)
T ss_dssp --CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred --CCCCCCCHHHHHHHHHHhCCChhhCcCHHHHHHHHHHHHHhc
Confidence 111122347889999999999999999999999999987743
No 56
>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}
Probab=100.00 E-value=1.3e-42 Score=356.56 Aligned_cols=265 Identities=27% Similarity=0.437 Sum_probs=211.3
Q ss_pred HHHHHHHhhcccCCCCceEEEEEEEc------CCcEEEEEEccCcc-chhHHHHHHHHHHHhhcCCCCccceeeEEEecC
Q 008707 232 LEEATNNFCKKIGKGSFGSVYYGKMK------DGKEVAVKIMADSC-SHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEH 304 (557)
Q Consensus 232 ~~~~~~~~~~~lG~G~~g~Vy~~~~~------~~~~vavK~~~~~~-~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~ 304 (557)
+....+++.+.||+|+||.||+|.+. +++.||||++.... ......+.+|+.+++.++||||+++++++.+..
T Consensus 68 ~~~~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~ 147 (367)
T 3l9p_A 68 VPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSL 147 (367)
T ss_dssp CCGGGEEEEEECCCCSSSCEEEEEECC-----CCEEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS
T ss_pred cCHhHeEEeeEeeeCCCEEEEEEEEccCCCCCcceeEEEEecccccChhhHHHHHHHHHHHHhCCCCCCCeEEEEEecCC
Confidence 33455667899999999999999853 46789999987543 344567889999999999999999999999999
Q ss_pred eeEEEEEecCCCChhhhhhccC----CCCCcCHHHHHHHHHHHHHHHHHHHcCCCCCeEeeccCCCCEEeCCCC---cEE
Q 008707 305 QRILVYEYMHNGTLRDRLHGSV----NQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINM---RAK 377 (557)
Q Consensus 305 ~~~lv~e~~~~gsL~~~l~~~~----~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~dlk~~NIll~~~~---~~k 377 (557)
..++||||+++|+|.+++.... ....+++..++.++.||+.||+|||+ ++|+||||||+|||++.++ .+|
T Consensus 148 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivHrDlkp~NIll~~~~~~~~~k 224 (367)
T 3l9p_A 148 PRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEE---NHFIHRDIAARNCLLTCPGPGRVAK 224 (367)
T ss_dssp SCEEEEECCTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEESCSSTTCCEE
T ss_pred CCEEEEEeCCCCCHHHHHHhhccccCccccccHHHHHHHHHHHHHHHHHHHh---CCeeCCCCChhhEEEecCCCCceEE
Confidence 9999999999999999997642 22468999999999999999999998 9999999999999999555 599
Q ss_pred EecccCccccCCCC-ccccccccCCCCccCCcccCCCCCCcccceehhHHHHHHHHh-CCCCCCCCCccccccHHHHHHH
Q 008707 378 VSDFGLSRQAEEDL-THISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELIS-GKKPVSVEDFGAELNIVHWARS 455 (557)
Q Consensus 378 l~Dfgla~~~~~~~-~~~~~~~~g~~~y~aPE~l~~~~~s~~~DvwslG~ll~ellt-g~~pf~~~~~~~~~~~~~~~~~ 455 (557)
|+|||+++...... ........+|+.|+|||.+.+..++.++|||||||++|||++ |..||...... + +..
T Consensus 225 L~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~pf~~~~~~------~-~~~ 297 (367)
T 3l9p_A 225 IGDFGMARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQ------E-VLE 297 (367)
T ss_dssp ECCCHHHHHHHHHSSCTTCCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHH------H-HHH
T ss_pred ECCCccccccccccccccCCCcCCcccEECHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHH------H-HHH
Confidence 99999997542221 112223457899999999998899999999999999999998 99999744321 1 112
Q ss_pred HHhcCCccccccccccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhhhhhc
Q 008707 456 MIKKGDVISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKIEK 515 (557)
Q Consensus 456 ~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~evl~~L~~~~~~~~ 515 (557)
.+..+.... .....+..+.+++.+||+.+|++|||+.||++.|+.+.....
T Consensus 298 ~i~~~~~~~---------~~~~~~~~l~~li~~~l~~dP~~Rps~~eil~~l~~~~~~~~ 348 (367)
T 3l9p_A 298 FVTSGGRMD---------PPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQDPD 348 (367)
T ss_dssp HHHTTCCCC---------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHCHH
T ss_pred HHHcCCCCC---------CCccCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhhChh
Confidence 222222111 111223468899999999999999999999999999887543
No 57
>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...
Probab=100.00 E-value=3.1e-42 Score=340.13 Aligned_cols=259 Identities=25% Similarity=0.430 Sum_probs=210.5
Q ss_pred HHHHhhcccCCCCceEEEEEEEcCCcEEEEEEccCccchhHHHHHHHHHHHhhcCCCCccceeeEEEecCeeEEEEEecC
Q 008707 235 ATNNFCKKIGKGSFGSVYYGKMKDGKEVAVKIMADSCSHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYEYMH 314 (557)
Q Consensus 235 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~lv~e~~~ 314 (557)
..|++.+.||+|+||.||+|...++..||+|++.... ...+.+.+|+++++.++||||+++++++.+ +..++||||++
T Consensus 13 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~~~~~v~e~~~ 90 (279)
T 1qpc_A 13 ETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYAVVTQ-EPIYIITEYME 90 (279)
T ss_dssp GGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEEECCT
T ss_pred HhhhheeeecCCCCeEEEEEEEcCCcEEEEEEecCCc-ccHHHHHHHHHHHHhCCCcCcceEEEEEcC-CCcEEEEecCC
Confidence 4566789999999999999999888899999987543 335678999999999999999999999874 56899999999
Q ss_pred CCChhhhhhccCCCCCcCHHHHHHHHHHHHHHHHHHHcCCCCCeEeeccCCCCEEeCCCCcEEEecccCccccCCCCccc
Q 008707 315 NGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEEDLTHI 394 (557)
Q Consensus 315 ~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfgla~~~~~~~~~~ 394 (557)
+++|.+++... ....+++..++.++.|++.||+|||+ .+++||||||+||+++.++.+||+|||++..........
T Consensus 91 ~~~L~~~l~~~-~~~~~~~~~~~~i~~qi~~~l~~lH~---~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~ 166 (279)
T 1qpc_A 91 NGSLVDFLKTP-SGIKLTINKLLDMAAQIAEGMAFIEE---RNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTA 166 (279)
T ss_dssp TCBHHHHTTSH-HHHTCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTSCEEECCCTTCEECSSSCEEC
T ss_pred CCCHHHHHhcC-CCCCCCHHHHHHHHHHHHHHHHHHHH---CCeeccCCCHhhEEEcCCCCEEECCCcccccccCccccc
Confidence 99999998742 12358999999999999999999998 999999999999999999999999999998776544333
Q ss_pred cccccCCCCccCCcccCCCCCCcccceehhHHHHHHHHh-CCCCCCCCCccccccHHHHHHHHHhcCCccccccccccCC
Q 008707 395 SSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELIS-GKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPVLIGN 473 (557)
Q Consensus 395 ~~~~~g~~~y~aPE~l~~~~~s~~~DvwslG~ll~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~ 473 (557)
.....+++.|+|||.+.+..++.++||||||+++|+|++ |+.||....... . ...+..+....
T Consensus 167 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~---~----~~~~~~~~~~~--------- 230 (279)
T 1qpc_A 167 REGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPE---V----IQNLERGYRMV--------- 230 (279)
T ss_dssp CTTCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTCCHHH---H----HHHHHTTCCCC---------
T ss_pred ccCCCCccCccChhhhccCCCCchhhhHHHHHHHHHHHhCCCCCCcccCHHH---H----HHHHhcccCCC---------
Confidence 334457889999999988889999999999999999999 999997433211 1 11222221111
Q ss_pred CCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhhhhhc
Q 008707 474 VKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKIEK 515 (557)
Q Consensus 474 ~~~~~~~~l~~li~~cl~~~P~~RPt~~evl~~L~~~~~~~~ 515 (557)
.+...+..+.+++.+|++.+|++|||+++|++.|+++.....
T Consensus 231 ~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~~~ 272 (279)
T 1qpc_A 231 RPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFFTATE 272 (279)
T ss_dssp CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHC-
T ss_pred CcccccHHHHHHHHHHhccChhhCCCHHHHHHHHHHHHHhcc
Confidence 111223478899999999999999999999999999876543
No 58
>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...
Probab=100.00 E-value=1.3e-42 Score=366.52 Aligned_cols=259 Identities=27% Similarity=0.431 Sum_probs=205.7
Q ss_pred HHHHhhcccCCCCceEEEEEEEcCCcEEEEEEccCccchhHHHHHHHHHHHhhcCCCCccceeeEEEecCeeEEEEEecC
Q 008707 235 ATNNFCKKIGKGSFGSVYYGKMKDGKEVAVKIMADSCSHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYEYMH 314 (557)
Q Consensus 235 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~lv~e~~~ 314 (557)
..+++.+.||+|+||.||+|.++++..||||+++... ...+.+.+|++++++++||||+++++++.+ +..++||||++
T Consensus 184 ~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-~~~~iv~e~~~ 261 (452)
T 1fmk_A 184 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMS 261 (452)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTEEEEEEECCTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEECCCT
T ss_pred hHceeeeeecCCCCeEEEEEEECCCceEEEEEeccCC-CCHHHHHHHHHHHHhCCCCCEeeEEEEEcC-CceEEEehhhc
Confidence 4456788999999999999999988889999987543 235679999999999999999999999876 67899999999
Q ss_pred CCChhhhhhccCCCCCcCHHHHHHHHHHHHHHHHHHHcCCCCCeEeeccCCCCEEeCCCCcEEEecccCccccCCCCccc
Q 008707 315 NGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEEDLTHI 394 (557)
Q Consensus 315 ~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfgla~~~~~~~~~~ 394 (557)
+|+|.+++... ....+++..+..++.||+.||+|||+ ++++||||||+|||++.++.+||+|||+++.........
T Consensus 262 ~gsL~~~l~~~-~~~~~~~~~~~~i~~qi~~~l~~LH~---~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~ 337 (452)
T 1fmk_A 262 KGSLLDFLKGE-TGKYLRLPQLVDMAAQIASGMAYVER---MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTA 337 (452)
T ss_dssp TCBHHHHHSHH-HHTTCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEECGGGCEEECCCCTTC---------
T ss_pred CCCHHHHHHhc-CCCCCCHHHHHHHHHHHHHHHHHHHh---CCeeCCCCChhhEEECCCCCEEECCCccceecCCCceec
Confidence 99999999743 23458899999999999999999998 999999999999999999999999999998765433222
Q ss_pred cccccCCCCccCCcccCCCCCCcccceehhHHHHHHHHh-CCCCCCCCCccccccHHHHHHHHHhcCCccccccccccCC
Q 008707 395 SSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELIS-GKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPVLIGN 473 (557)
Q Consensus 395 ~~~~~g~~~y~aPE~l~~~~~s~~~DvwslG~ll~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~ 473 (557)
.....+++.|+|||.+.+..++.++||||||+++|||+| |+.||.+.... + +...+..+....
T Consensus 338 ~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~------~-~~~~i~~~~~~~--------- 401 (452)
T 1fmk_A 338 RQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNR------E-VLDQVERGYRMP--------- 401 (452)
T ss_dssp -----CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHH------H-HHHHHHTTCCCC---------
T ss_pred ccCCcccccccCHhHHhcCCCCccccHHhHHHHHHHHHhCCCCCCCCCCHH------H-HHHHHHcCCCCC---------
Confidence 333446789999999998899999999999999999999 99999743321 1 112222322111
Q ss_pred CCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhhhhhc
Q 008707 474 VKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKIEK 515 (557)
Q Consensus 474 ~~~~~~~~l~~li~~cl~~~P~~RPt~~evl~~L~~~~~~~~ 515 (557)
.+...+..+.+++.+||+.+|++|||+++|++.|+++.....
T Consensus 402 ~~~~~~~~l~~li~~cl~~dP~~Rpt~~~l~~~L~~~~~~~~ 443 (452)
T 1fmk_A 402 CPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTSTE 443 (452)
T ss_dssp CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTTTSCSC
T ss_pred CCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHhccCC
Confidence 112234478899999999999999999999999998875433
No 59
>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}
Probab=100.00 E-value=1.3e-41 Score=343.51 Aligned_cols=251 Identities=23% Similarity=0.299 Sum_probs=203.9
Q ss_pred HHHHHhhcccCCCCceEEEEEEEc-CCcEEEEEEccCccc------hhHHHHHHHHHHHhhcCCCCccceeeEEEecCee
Q 008707 234 EATNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCS------HRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQR 306 (557)
Q Consensus 234 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~------~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~ 306 (557)
...|++.+.||+|+||.||+|... +|+.||+|++..... ...+.+.+|+++++.++||||+++++++.+.+..
T Consensus 10 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~ 89 (326)
T 2y0a_A 10 DDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDV 89 (326)
T ss_dssp HHHEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEE
T ss_pred ccceEeceEEeeCCCeEEEEEEECCCCcEEEEEEEEccccccccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEE
Confidence 355777899999999999999876 589999999865322 1356789999999999999999999999999999
Q ss_pred EEEEEecCCCChhhhhhccCCCCCcCHHHHHHHHHHHHHHHHHHHcCCCCCeEeeccCCCCEEeCCCC----cEEEeccc
Q 008707 307 ILVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINM----RAKVSDFG 382 (557)
Q Consensus 307 ~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~dlk~~NIll~~~~----~~kl~Dfg 382 (557)
++||||+++++|.+++.. ...+++..+..++.||+.||+|||+ .+++||||||+||+++.++ .+||+|||
T Consensus 90 ~lv~e~~~~~~L~~~l~~---~~~~~~~~~~~i~~qi~~al~~lH~---~~ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg 163 (326)
T 2y0a_A 90 ILILELVAGGELFDFLAE---KESLTEEEATEFLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFG 163 (326)
T ss_dssp EEEEECCCSCBHHHHHTT---SSCCBHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEESCSSSSSCCEEECCCT
T ss_pred EEEEEcCCCCCHHHHHHh---cCCcCHHHHHHHHHHHHHHHHHHHH---CCeEcCCCCHHHEEEecCCCCCCCEEEEECC
Confidence 999999999999999973 4568999999999999999999998 9999999999999999877 79999999
Q ss_pred CccccCCCCccccccccCCCCccCCcccCCCCCCcccceehhHHHHHHHHhCCCCCCCCCccccccHHHHHHHHHhcCCc
Q 008707 383 LSRQAEEDLTHISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDV 462 (557)
Q Consensus 383 la~~~~~~~~~~~~~~~g~~~y~aPE~l~~~~~s~~~DvwslG~ll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 462 (557)
++........ .....||+.|+|||++.+..++.++||||||+++|+|++|..||....... .... +.....
T Consensus 164 ~a~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~------~~~~-~~~~~~ 234 (326)
T 2y0a_A 164 LAHKIDFGNE--FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQE------TLAN-VSAVNY 234 (326)
T ss_dssp TCEECCTTSC--CCCCCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHH------HHHH-HHHTCC
T ss_pred CCeECCCCCc--cccccCCcCcCCceeecCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHH------HHHH-HHhcCC
Confidence 9987653322 223458999999999999999999999999999999999999997443211 1111 111111
Q ss_pred cccccccccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 008707 463 ISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 505 (557)
Q Consensus 463 ~~~~d~~l~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~evl~ 505 (557)
. ........ .+..+.+++.+||+.||++|||+.|+++
T Consensus 235 ~--~~~~~~~~----~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 271 (326)
T 2y0a_A 235 E--FEDEYFSN----TSALAKDFIRRLLVKDPKKRMTIQDSLQ 271 (326)
T ss_dssp C--CCHHHHTT----SCHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred C--cCcccccc----CCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 0 00000111 1236789999999999999999999987
No 60
>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}
Probab=100.00 E-value=3.1e-41 Score=353.93 Aligned_cols=253 Identities=22% Similarity=0.294 Sum_probs=204.0
Q ss_pred HHHHHhhcccCCCCceEEEEEEEc-CCcEEEEEEccCcc--chhHHHHHHHHHHHhhcCCCCccceeeEEEecCeeEEEE
Q 008707 234 EATNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSC--SHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVY 310 (557)
Q Consensus 234 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~lv~ 310 (557)
...|++.+.||+|+||.||+|... +|+.||+|++.... ....+.+.+|+++++.++||||+++++++.+.+..++||
T Consensus 10 ~~~Y~i~~~LG~G~fg~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lv~ 89 (444)
T 3soa_A 10 TEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGHHYLIF 89 (444)
T ss_dssp HHHEEEEEEEEEC--CEEEEEEETTTTEEEEEEEEESCSCHHHHHHHHHHHHHHHHHCCBTTBCCEEEEEECSSEEEEEE
T ss_pred cCCeEEEEEeccCCCeEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCcCCCeEEEEEEECCEEEEEE
Confidence 456777899999999999999865 68999999986543 234567899999999999999999999999999999999
Q ss_pred EecCCCChhhhhhccCCCCCcCHHHHHHHHHHHHHHHHHHHcCCCCCeEeeccCCCCEEeC---CCCcEEEecccCcccc
Q 008707 311 EYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLD---INMRAKVSDFGLSRQA 387 (557)
Q Consensus 311 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~dlk~~NIll~---~~~~~kl~Dfgla~~~ 387 (557)
||+++|+|.+.+.. ...+++..+..++.||+.||+|||+ ++|+||||||+|||++ .++.+||+|||++...
T Consensus 90 E~~~gg~L~~~i~~---~~~~~e~~~~~i~~qil~aL~~lH~---~givHrDlKp~NIll~~~~~~~~vkL~DFG~a~~~ 163 (444)
T 3soa_A 90 DLVTGGELFEDIVA---REYYSEADASHCIQQILEAVLHCHQ---MGVVHRNLKPENLLLASKLKGAAVKLADFGLAIEV 163 (444)
T ss_dssp CCCBCCBHHHHHHH---CSCCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCSSTTEEESBSSTTCCEEECCCSSCBCC
T ss_pred EeCCCCCHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHH---CCccccCCCHHHEEEeccCCCCcEEEccCceeEEe
Confidence 99999999999874 4568999999999999999999998 9999999999999998 4678999999999876
Q ss_pred CCCCccccccccCCCCccCCcccCCCCCCcccceehhHHHHHHHHhCCCCCCCCCccccccHHHHHHHHHhcCCcccccc
Q 008707 388 EEDLTHISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVD 467 (557)
Q Consensus 388 ~~~~~~~~~~~~g~~~y~aPE~l~~~~~s~~~DvwslG~ll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 467 (557)
...... .....||+.|+|||++.+..++.++||||+||++|+|++|..||...+... ....+..+.... ..
T Consensus 164 ~~~~~~-~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyell~G~~Pf~~~~~~~-------~~~~i~~~~~~~-~~ 234 (444)
T 3soa_A 164 EGEQQA-WFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDEDQHR-------LYQQIKAGAYDF-PS 234 (444)
T ss_dssp CTTCCB-CCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH-------HHHHHHHTCCCC-CT
T ss_pred cCCCce-eecccCCcccCCHHHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCccHHH-------HHHHHHhCCCCC-Cc
Confidence 543322 223469999999999999999999999999999999999999997443211 112222222211 00
Q ss_pred ccccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 008707 468 PVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLA 506 (557)
Q Consensus 468 ~~l~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~evl~~ 506 (557)
+ ... ..+..+.+++.+||+.||++|||+.|+++.
T Consensus 235 ~-~~~----~~s~~~~~li~~~L~~dP~~Rpta~e~L~h 268 (444)
T 3soa_A 235 P-EWD----TVTPEAKDLINKMLTINPSKRITAAEALKH 268 (444)
T ss_dssp T-TTT----TSCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred c-ccc----cCCHHHHHHHHHHcCCChhHCCCHHHHhcC
Confidence 0 011 123468899999999999999999999873
No 61
>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*
Probab=100.00 E-value=1.2e-41 Score=339.70 Aligned_cols=264 Identities=23% Similarity=0.393 Sum_probs=207.3
Q ss_pred HHHHHhhcccCCCCceEEEEEEE-----cCCcEEEEEEccCcc-chhHHHHHHHHHHHhhcCCCCccceeeEEEec--Ce
Q 008707 234 EATNNFCKKIGKGSFGSVYYGKM-----KDGKEVAVKIMADSC-SHRTQQFVTEVALLSRIHHRNLVPLIGYCEEE--HQ 305 (557)
Q Consensus 234 ~~~~~~~~~lG~G~~g~Vy~~~~-----~~~~~vavK~~~~~~-~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~--~~ 305 (557)
...|++.+.||+|+||.||+|.+ .+++.||+|++.... ....+.+.+|+++++.++||||+++++++... ..
T Consensus 20 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~ 99 (302)
T 4e5w_A 20 KRFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNG 99 (302)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC-----CCHHHHHHHHHHHHTCCCTTBCCEEEEEEC---CC
T ss_pred hhhhhhhhccCCCCceEEEEEEEccccCccCeEEEEEEecccccchhHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCce
Confidence 34456789999999999999984 358899999987543 23457789999999999999999999999876 66
Q ss_pred eEEEEEecCCCChhhhhhccCCCCCcCHHHHHHHHHHHHHHHHHHHcCCCCCeEeeccCCCCEEeCCCCcEEEecccCcc
Q 008707 306 RILVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSR 385 (557)
Q Consensus 306 ~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfgla~ 385 (557)
.++||||+++|+|.+++... ...+++..++.++.|++.||+|||+ .+++||||||+||+++.++.+||+|||++.
T Consensus 100 ~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~ 174 (302)
T 4e5w_A 100 IKLIMEFLPSGSLKEYLPKN--KNKINLKQQLKYAVQICKGMDYLGS---RQYVHRDLAARNVLVESEHQVKIGDFGLTK 174 (302)
T ss_dssp EEEEEECCTTCBHHHHHHHH--TTTCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEEEETTEEEECCCTTCE
T ss_pred EEEEEEeCCCCcHHHHHHhc--cccCCHHHHHHHHHHHHHHHHHhhc---CCcccCCCchheEEEcCCCCEEECcccccc
Confidence 89999999999999999643 4568999999999999999999998 999999999999999999999999999998
Q ss_pred ccCCCCc--cccccccCCCCccCCcccCCCCCCcccceehhHHHHHHHHhCCCCCCCCCcc--------ccccHHHHHHH
Q 008707 386 QAEEDLT--HISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFG--------AELNIVHWARS 455 (557)
Q Consensus 386 ~~~~~~~--~~~~~~~g~~~y~aPE~l~~~~~s~~~DvwslG~ll~elltg~~pf~~~~~~--------~~~~~~~~~~~ 455 (557)
....... .......+|..|+|||.+.+..++.++||||||+++|+|+||..|+...... ...........
T Consensus 175 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (302)
T 4e5w_A 175 AIETDKEYYTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLTYCDSDSSPMALFLKMIGPTHGQMTVTRLVN 254 (302)
T ss_dssp ECCTTCCEEECCCCTTCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCGGGHHHHHHH
T ss_pred cccCCCcceeccCCCCCCccccCCeeecCCCCCcchhHHHHHHHHHHHHHccCCCcchhhHHhhccCCcccccCHHHHHH
Confidence 7654432 2233445788899999999989999999999999999999999987522100 01111111222
Q ss_pred HHhcCCccccccccccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhh
Q 008707 456 MIKKGDVISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSI 511 (557)
Q Consensus 456 ~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~evl~~L~~~~ 511 (557)
.+..+.... .+...+..+.+++.+||+.||++|||++|+++.|+++.
T Consensus 255 ~~~~~~~~~---------~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~ll 301 (302)
T 4e5w_A 255 TLKEGKRLP---------CPPNCPDEVYQLMRKCWEFQPSNRTSFQNLIEGFEALL 301 (302)
T ss_dssp HHHTTCCCC---------CCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHH
T ss_pred HHhccCCCC---------CCCCCCHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHh
Confidence 222222111 11223347889999999999999999999999999875
No 62
>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A
Probab=100.00 E-value=1.1e-41 Score=343.92 Aligned_cols=249 Identities=24% Similarity=0.334 Sum_probs=181.4
Q ss_pred cccCCCCceEEEEEEEc-CCcEEEEEEccCccchhHHHHHHHHHHHhhcC-CCCccceeeEEEecCeeEEEEEecCCCCh
Q 008707 241 KKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCSHRTQQFVTEVALLSRIH-HRNLVPLIGYCEEEHQRILVYEYMHNGTL 318 (557)
Q Consensus 241 ~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~il~~l~-h~nIv~~~~~~~~~~~~~lv~e~~~~gsL 318 (557)
+.||+|+||.||+|.+. +++.||+|++... ....+.+|+.+++.+. ||||+++++++.+....++||||+++|+|
T Consensus 17 ~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~~~L 93 (325)
T 3kn6_A 17 KPLGEGSFSICRKCVHKKSNQAFAVKIISKR---MEANTQKEITALKLCEGHPNIVKLHEVFHDQLHTFLVMELLNGGEL 93 (325)
T ss_dssp CCSEEETTEEEEEEEETTTCCEEEEEEEEGG---GHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECCCCSCBH
T ss_pred CccccCCCeEEEEEEECCCCCEEEEEEEChh---hhhhHHHHHHHHHHhcCCCCeeEEEEEEEcCCEEEEEEEccCCCcH
Confidence 77999999999999876 5899999998643 3456778999999996 99999999999999999999999999999
Q ss_pred hhhhhccCCCCCcCHHHHHHHHHHHHHHHHHHHcCCCCCeEeeccCCCCEEeCCCC---cEEEecccCccccCCCCcccc
Q 008707 319 RDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINM---RAKVSDFGLSRQAEEDLTHIS 395 (557)
Q Consensus 319 ~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~dlk~~NIll~~~~---~~kl~Dfgla~~~~~~~~~~~ 395 (557)
.+++.. ...+++..+..++.|++.||+|||+ ++|+||||||+||+++.++ .+||+|||++......... .
T Consensus 94 ~~~l~~---~~~~~~~~~~~i~~qi~~~l~~LH~---~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~~~-~ 166 (325)
T 3kn6_A 94 FERIKK---KKHFSETEASYIMRKLVSAVSHMHD---VGVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQP-L 166 (325)
T ss_dssp HHHHHH---CSCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEEEC----CEEEECCCTTCEECCC------
T ss_pred HHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHH---CCCeecCCCHHHEEEecCCCcccEEEeccccceecCCCCCc-c
Confidence 999974 4679999999999999999999998 9999999999999998665 7999999999865443222 2
Q ss_pred ccccCCCCccCCcccCCCCCCcccceehhHHHHHHHHhCCCCCCCCCccccccHHHHHHHHHhcCCccccccccccCCCC
Q 008707 396 SVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPVLIGNVK 475 (557)
Q Consensus 396 ~~~~g~~~y~aPE~l~~~~~s~~~DvwslG~ll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~ 475 (557)
....||+.|+|||++.+..++.++||||||+++|+|++|+.||...+..............+..+.... . ....
T Consensus 167 ~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~i~~~~~~~--~----~~~~ 240 (325)
T 3kn6_A 167 KTPCFTLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVEIMKKIKKGDFSF--E----GEAW 240 (325)
T ss_dssp -----------------CCCCHHHHHHHHHHHHHHHHHSSCTTC-------CCCHHHHHHHHTTTCCCC--C----SHHH
T ss_pred cccCCCcCccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCccccccccHHHHHHHHHcCCCCC--C----cccc
Confidence 234579999999999999999999999999999999999999985544322111222233333332211 0 0000
Q ss_pred HHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 008707 476 IESIWRIAEVAIQCVEQRGFSRPKMQEIVL 505 (557)
Q Consensus 476 ~~~~~~l~~li~~cl~~~P~~RPt~~evl~ 505 (557)
......+.+++.+||+.||++|||++|+++
T Consensus 241 ~~~s~~~~~li~~~L~~dP~~Rpt~~ell~ 270 (325)
T 3kn6_A 241 KNVSQEAKDLIQGLLTVDPNKRLKMSGLRY 270 (325)
T ss_dssp HTSCHHHHHHHHHHHCCCTTTCCCTTTSTT
T ss_pred cCCCHHHHHHHHHHCCCChhHCCCHHHHhc
Confidence 112347889999999999999999999874
No 63
>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A
Probab=100.00 E-value=1e-41 Score=347.98 Aligned_cols=255 Identities=23% Similarity=0.282 Sum_probs=204.3
Q ss_pred HHHHHHhhcccCCCCceEEEEEEEc-CCcEEEEEEccCcc-----chhHHHHHHHHHHHhhcCCCCccceeeEEEecCee
Q 008707 233 EEATNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSC-----SHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQR 306 (557)
Q Consensus 233 ~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~-----~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~ 306 (557)
....|++.+.||+|+||.||+|... +++.||+|++.... ....+.+.+|+++++.++||||+++++++.+++..
T Consensus 22 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~ 101 (351)
T 3c0i_A 22 FEDVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDGML 101 (351)
T ss_dssp HHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEE
T ss_pred cccceEEeeEEeeCCCEEEEEEEECCCCCEEEEEEEEhhhccccccchHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEE
Confidence 4567788999999999999999875 68999999985321 12356789999999999999999999999999999
Q ss_pred EEEEEecCCCChhhhhhccC-CCCCcCHHHHHHHHHHHHHHHHHHHcCCCCCeEeeccCCCCEEeCCCCc---EEEeccc
Q 008707 307 ILVYEYMHNGTLRDRLHGSV-NQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMR---AKVSDFG 382 (557)
Q Consensus 307 ~lv~e~~~~gsL~~~l~~~~-~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~dlk~~NIll~~~~~---~kl~Dfg 382 (557)
++||||+++++|.+.+.... ....+++..+..++.||+.||+|||+ ++|+||||||+|||++.++. +||+|||
T Consensus 102 ~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~---~~ivHrDlkp~NIl~~~~~~~~~vkl~Dfg 178 (351)
T 3c0i_A 102 YMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHD---NNIIHRDVKPHCVLLASKENSAPVKLGGFG 178 (351)
T ss_dssp EEEEECCSSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECSSSTTCCEEECCCT
T ss_pred EEEEeCCCCCCHHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHH---CCceeccCChHHeEEecCCCCCcEEEecCc
Confidence 99999999999988776432 34468999999999999999999998 99999999999999986654 9999999
Q ss_pred CccccCCCCccccccccCCCCccCCcccCCCCCCcccceehhHHHHHHHHhCCCCCCCCCccccccHHHHHHHHHhcCCc
Q 008707 383 LSRQAEEDLTHISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDV 462 (557)
Q Consensus 383 la~~~~~~~~~~~~~~~g~~~y~aPE~l~~~~~s~~~DvwslG~ll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 462 (557)
++......... .....||+.|+|||++.+..++.++|||||||++|+|++|+.||..... + ....+..+..
T Consensus 179 ~a~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~-------~-~~~~i~~~~~ 249 (351)
T 3c0i_A 179 VAIQLGESGLV-AGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTKE-------R-LFEGIIKGKY 249 (351)
T ss_dssp TCEECCTTSCB-CCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCSSHH-------H-HHHHHHHTCC
T ss_pred ceeEecCCCee-ecCCcCCcCccCHHHHcCCCCCchHhhHHHHHHHHHHHHCCCCCCCcHH-------H-HHHHHHcCCC
Confidence 99876543322 2334589999999999999999999999999999999999999974311 1 1111222221
Q ss_pred cccccccccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 008707 463 ISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 505 (557)
Q Consensus 463 ~~~~d~~l~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~evl~ 505 (557)
. .++..... .+..+.+++.+||+.||++|||+.|+++
T Consensus 250 ~--~~~~~~~~----~s~~~~~li~~~L~~dP~~R~s~~e~l~ 286 (351)
T 3c0i_A 250 K--MNPRQWSH----ISESAKDLVRRMLMLDPAERITVYEALN 286 (351)
T ss_dssp C--CCHHHHTT----SCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred C--CCcccccc----CCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 1 01101111 1246889999999999999999999986
No 64
>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}
Probab=100.00 E-value=1.4e-41 Score=340.32 Aligned_cols=262 Identities=28% Similarity=0.480 Sum_probs=202.9
Q ss_pred HHHhhcccCCCCceEEEEEEEcCCcEEEEEEccCccchhHHHHHHHHHHHhhcCCCCccceeeEEEecCeeEEEEEecCC
Q 008707 236 TNNFCKKIGKGSFGSVYYGKMKDGKEVAVKIMADSCSHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYEYMHN 315 (557)
Q Consensus 236 ~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~lv~e~~~~ 315 (557)
.+++.+.||+|+||.||+|.+. ++.||+|++... ...+.+.+|++++++++||||+++++++.+ ..++||||+++
T Consensus 9 ~~~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~--~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~--~~~lv~e~~~~ 83 (307)
T 2eva_A 9 EIEVEEVVGRGAFGVVCKAKWR-AKDVAIKQIESE--SERKAFIVELRQLSRVNHPNIVKLYGACLN--PVCLVMEYAEG 83 (307)
T ss_dssp GEEEEEEEECCSSSEEEEEEET-TEEEEEEECSST--THHHHHHHHHHHHHHCCCTTBCCEEEBCTT--TTEEEEECCTT
T ss_pred HeeeeeEeecCCCceEEEEEEC-CeeEEEEEecCh--hHHHHHHHHHHHHhcCCCCCcCeEEEEEcC--CcEEEEEcCCC
Confidence 3456789999999999999986 789999998643 345778999999999999999999998864 47899999999
Q ss_pred CChhhhhhccCCCCCcCHHHHHHHHHHHHHHHHHHHcCCCCCeEeeccCCCCEEeCCCCc-EEEecccCccccCCCCccc
Q 008707 316 GTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMR-AKVSDFGLSRQAEEDLTHI 394 (557)
Q Consensus 316 gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~dlk~~NIll~~~~~-~kl~Dfgla~~~~~~~~~~ 394 (557)
|+|.+++........+++..++.++.|+++||+|||+...++++||||||+||+++.++. +||+|||++.......
T Consensus 84 ~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~~kl~Dfg~~~~~~~~~--- 160 (307)
T 2eva_A 84 GSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTHM--- 160 (307)
T ss_dssp CBHHHHHHCSSSEECCCHHHHHHHHHHHHHHHHHHHTCSSSCCCCCCCSGGGEEEETTTTEEEECCCCC-----------
T ss_pred CCHHHHHhccCCCCccCHHHHHHHHHHHHHHHHHHHhCCCCCeecCCCChhHEEEeCCCCEEEEccccccccccccc---
Confidence 999999985433335788999999999999999999733368999999999999998886 7999999997654322
Q ss_pred cccccCCCCccCCcccCCCCCCcccceehhHHHHHHHHhCCCCCCCCCccccccHHHHHHHHHhcCCccccccccccCCC
Q 008707 395 SSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPVLIGNV 474 (557)
Q Consensus 395 ~~~~~g~~~y~aPE~l~~~~~s~~~DvwslG~ll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~ 474 (557)
....||+.|+|||.+.+..++.++||||||+++|||++|+.||....... .... .....+..... ...
T Consensus 161 -~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~----~~~~-~~~~~~~~~~~-----~~~- 228 (307)
T 2eva_A 161 -TNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPA----FRIM-WAVHNGTRPPL-----IKN- 228 (307)
T ss_dssp -----CCTTSSCHHHHTCCCCCTHHHHHHHHHHHHHHHHTCCTTTTTCSSH----HHHH-HHHHTTCCCCC-----BTT-
T ss_pred -ccCCCCCceEChhhhCCCCCCcHHHHHHHHHHHHHHHHCCCCchhhCccH----HHHH-HHHhcCCCCCc-----ccc-
Confidence 22348999999999999999999999999999999999999997432211 1111 11122221111 111
Q ss_pred CHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhhhhhcCCCCc
Q 008707 475 KIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKIEKGGDQK 520 (557)
Q Consensus 475 ~~~~~~~l~~li~~cl~~~P~~RPt~~evl~~L~~~~~~~~~~~~~ 520 (557)
.+..+.+++.+||+.||++|||++||++.|+.+.........+
T Consensus 229 ---~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~~~~~~~ 271 (307)
T 2eva_A 229 ---LPKPIESLMTRCWSKDPSQRPSMEEIVKIMTHLMRYFPGADEP 271 (307)
T ss_dssp ---CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHGGGCCCTTSC
T ss_pred ---cCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHhccCCCCc
Confidence 2346889999999999999999999999999998766554443
No 65
>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7
Probab=100.00 E-value=6e-42 Score=348.31 Aligned_cols=262 Identities=26% Similarity=0.434 Sum_probs=210.5
Q ss_pred HHHHhhcccCCCCceEEEEEEEcC------CcEEEEEEccCcc-chhHHHHHHHHHHHhhcCCCCccceeeEEEecCeeE
Q 008707 235 ATNNFCKKIGKGSFGSVYYGKMKD------GKEVAVKIMADSC-SHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRI 307 (557)
Q Consensus 235 ~~~~~~~~lG~G~~g~Vy~~~~~~------~~~vavK~~~~~~-~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~ 307 (557)
..|++.+.||+|+||.||+|.+.+ ++.||+|++.... ....+.+.+|+++++.++||||+++++++.+.+..+
T Consensus 47 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~ 126 (343)
T 1luf_A 47 NNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCAVGKPMC 126 (343)
T ss_dssp GGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSCE
T ss_pred HHCeeeeeeeecCCeeEEEEEecCcCCCCCceeEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEccCCceE
Confidence 345567899999999999998753 4789999997643 334567999999999999999999999999999999
Q ss_pred EEEEecCCCChhhhhhccCC---------------------CCCcCHHHHHHHHHHHHHHHHHHHcCCCCCeEeeccCCC
Q 008707 308 LVYEYMHNGTLRDRLHGSVN---------------------QKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSS 366 (557)
Q Consensus 308 lv~e~~~~gsL~~~l~~~~~---------------------~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~dlk~~ 366 (557)
+||||+++|+|.+++..... ...+++..++.++.||++||+|||+ ++|+||||||+
T Consensus 127 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~---~~ivH~Dlkp~ 203 (343)
T 1luf_A 127 LLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSE---RKFVHRDLATR 203 (343)
T ss_dssp EEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGG
T ss_pred EEEecCCCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCcc
Confidence 99999999999999975321 2568999999999999999999998 99999999999
Q ss_pred CEEeCCCCcEEEecccCccccCCCCc-cccccccCCCCccCCcccCCCCCCcccceehhHHHHHHHHh-CCCCCCCCCcc
Q 008707 367 NILLDINMRAKVSDFGLSRQAEEDLT-HISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELIS-GKKPVSVEDFG 444 (557)
Q Consensus 367 NIll~~~~~~kl~Dfgla~~~~~~~~-~~~~~~~g~~~y~aPE~l~~~~~s~~~DvwslG~ll~ellt-g~~pf~~~~~~ 444 (557)
||+++.++.+||+|||++........ .......+++.|+|||.+.+..++.++||||||+++|+|+| |..||......
T Consensus 204 NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~ 283 (343)
T 1luf_A 204 NCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYGMAHE 283 (343)
T ss_dssp GEEECGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHH
T ss_pred eEEECCCCeEEEeecCCCcccccCccccccCCCcccceecChhhhccCCcCcccccHHHHHHHHHHHhcCCCcCCCCChH
Confidence 99999999999999999986543221 22233457889999999998889999999999999999999 99999743321
Q ss_pred ccccHHHHHHHHHhcCCccccccccccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhhhhhc
Q 008707 445 AELNIVHWARSMIKKGDVISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKIEK 515 (557)
Q Consensus 445 ~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~evl~~L~~~~~~~~ 515 (557)
. ....+..+..... +...+..+.+++.+||+.||++|||+.||++.|+++.....
T Consensus 284 ~-------~~~~~~~~~~~~~---------~~~~~~~l~~li~~~l~~~p~~Rps~~~~~~~L~~~~~~~~ 338 (343)
T 1luf_A 284 E-------VIYYVRDGNILAC---------PENCPLELYNLMRLCWSKLPADRPSFCSIHRILQRMCERAE 338 (343)
T ss_dssp H-------HHHHHHTTCCCCC---------CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTTC---
T ss_pred H-------HHHHHhCCCcCCC---------CCCCCHHHHHHHHHHcccCcccCCCHHHHHHHHHHHHhhhh
Confidence 1 1222333332211 11223478899999999999999999999999999876443
No 66
>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*
Probab=100.00 E-value=1.2e-41 Score=343.39 Aligned_cols=250 Identities=25% Similarity=0.382 Sum_probs=199.2
Q ss_pred HHhhcccCCCCceEEEEEEEc-CCcEEEEEEccCccc-hhHHHHHHHHHHHhhcCCCCccceeeEEEecCeeEEEEEecC
Q 008707 237 NNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCS-HRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYEYMH 314 (557)
Q Consensus 237 ~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~lv~e~~~ 314 (557)
|++.+.||+|+||.||+|... +++.||+|++..... ...+.+.+|+.+++.++||||+++++++.+.+..++||||++
T Consensus 9 y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e~~~ 88 (323)
T 3tki_A 9 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCS 88 (323)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC-------CHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEECCT
T ss_pred ceeeeEEecCCCEEEEEEEECCCCcEEEEEEEEcccccchHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEEEEcCC
Confidence 456789999999999999876 689999999864322 234568899999999999999999999999999999999999
Q ss_pred CCChhhhhhccCCCCCcCHHHHHHHHHHHHHHHHHHHcCCCCCeEeeccCCCCEEeCCCCcEEEecccCccccCCCC-cc
Q 008707 315 NGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEEDL-TH 393 (557)
Q Consensus 315 ~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfgla~~~~~~~-~~ 393 (557)
+|+|.+++. ....+++..+..++.||+.||+|||+ .||+||||||+|||++.++.+||+|||++....... ..
T Consensus 89 ~~~L~~~l~---~~~~~~~~~~~~i~~qi~~aL~~LH~---~givH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~ 162 (323)
T 3tki_A 89 GGELFDRIE---PDIGMPEPDAQRFFHQLMAGVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRER 162 (323)
T ss_dssp TEEGGGGSB---TTTBCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTCCEEECCCTTCEECEETTEEC
T ss_pred CCcHHHHHh---hcCCCCHHHHHHHHHHHHHHHHHHHH---CCccccccchHHEEEeCCCCEEEEEeeccceeccCCccc
Confidence 999999987 35679999999999999999999998 999999999999999999999999999998654322 12
Q ss_pred ccccccCCCCccCCcccCCCCC-CcccceehhHHHHHHHHhCCCCCCCCCccccccHHHHHHHHHhcCCccccccccccC
Q 008707 394 ISSVARGTVGYLDPEYYGNQQL-TEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPVLIG 472 (557)
Q Consensus 394 ~~~~~~g~~~y~aPE~l~~~~~-s~~~DvwslG~ll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~ 472 (557)
......||+.|+|||++.+..+ +.++||||||+++|+|++|+.||....... .....+ ........ +
T Consensus 163 ~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~-~~~~~~----~~~~~~~~---~---- 230 (323)
T 3tki_A 163 LLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSC-QEYSDW----KEKKTYLN---P---- 230 (323)
T ss_dssp CBCSCCSCGGGSCHHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSCTTS-HHHHHH----HTTCTTST---T----
T ss_pred ccCCCccCcCccCcHHhccCCCCCCcccHHHHHHHHHHHHhCCCCCCCCchHH-HHHHHH----hcccccCC---c----
Confidence 2234568999999999987765 779999999999999999999997543321 111111 11111100 0
Q ss_pred CCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 008707 473 NVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLA 506 (557)
Q Consensus 473 ~~~~~~~~~l~~li~~cl~~~P~~RPt~~evl~~ 506 (557)
.......+.+++.+||+.||++|||++|+++.
T Consensus 231 --~~~~~~~~~~li~~~L~~dP~~R~t~~eil~h 262 (323)
T 3tki_A 231 --WKKIDSAPLALLHKILVENPSARITIPDIKKD 262 (323)
T ss_dssp --GGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred --cccCCHHHHHHHHHHccCChhhCcCHHHHhhC
Confidence 01123367899999999999999999999763
No 67
>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=9.2e-42 Score=343.80 Aligned_cols=249 Identities=19% Similarity=0.289 Sum_probs=202.8
Q ss_pred HHhhcccCCCCceEEEEEEEc-CCcEEEEEEccCccchhHHHHHHHHHHHhhcCCCCccceeeEEEecCeeEEEEEecCC
Q 008707 237 NNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCSHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYEYMHN 315 (557)
Q Consensus 237 ~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~lv~e~~~~ 315 (557)
|++.+.||+|+||.||+|... +++.||+|.+... ......+.+|+++++.++||||+++++++.+.+..++||||+++
T Consensus 7 y~~~~~lG~G~~g~Vy~~~~~~~~~~~a~K~~~~~-~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e~~~g 85 (321)
T 1tki_A 7 YMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVK-GTDQVLVKKEISILNIARHRNILHLHESFESMEELVMIFEFISG 85 (321)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCC-THHHHHHHHHHHHHHHSCCTTBCCEEEEEEETTEEEEEECCCCC
T ss_pred eEeeeEEecCCCeEEEEEEECCCCcEEEEEEEecC-cccHHHHHHHHHHHHhCCCCCCCeEeEEEecCCEEEEEEEeCCC
Confidence 456789999999999999876 5889999998644 34456788999999999999999999999999999999999999
Q ss_pred CChhhhhhccCCCCCcCHHHHHHHHHHHHHHHHHHHcCCCCCeEeeccCCCCEEeCC--CCcEEEecccCccccCCCCcc
Q 008707 316 GTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDI--NMRAKVSDFGLSRQAEEDLTH 393 (557)
Q Consensus 316 gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~dlk~~NIll~~--~~~~kl~Dfgla~~~~~~~~~ 393 (557)
|+|.+++... ...+++..++.++.|++.||+|||+ .|++||||||+|||++. ++.+||+|||++........
T Consensus 86 ~~L~~~l~~~--~~~~~~~~~~~i~~qi~~al~~lH~---~givH~Dlkp~NIl~~~~~~~~~kl~Dfg~a~~~~~~~~- 159 (321)
T 1tki_A 86 LDIFERINTS--AFELNEREIVSYVHQVCEALQFLHS---HNIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGDN- 159 (321)
T ss_dssp CBHHHHHTSS--SCCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEESSSSCCCEEECCCTTCEECCTTCE-
T ss_pred CCHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHH---CCCCcCCCCHHHEEEccCCCCCEEEEECCCCeECCCCCc-
Confidence 9999999742 3568999999999999999999998 99999999999999987 78999999999987654332
Q ss_pred ccccccCCCCccCCcccCCCCCCcccceehhHHHHHHHHhCCCCCCCCCccccccHHHHHHHHHhcCCccccccccccCC
Q 008707 394 ISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPVLIGN 473 (557)
Q Consensus 394 ~~~~~~g~~~y~aPE~l~~~~~s~~~DvwslG~ll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~ 473 (557)
.....||+.|+|||++.+..++.++||||||+++|+|++|..||...... +.... +..+... ++......
T Consensus 160 -~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~------~~~~~-i~~~~~~--~~~~~~~~ 229 (321)
T 1tki_A 160 -FRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQ------QIIEN-IMNAEYT--FDEEAFKE 229 (321)
T ss_dssp -EEEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCSSHH------HHHHH-HHHTCCC--CCHHHHTT
T ss_pred -cccccCChhhcCcHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCcCCCHH------HHHHH-HHcCCCC--CChhhhcc
Confidence 22345899999999999988999999999999999999999999744321 11111 1112111 00000111
Q ss_pred CCHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 008707 474 VKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLA 506 (557)
Q Consensus 474 ~~~~~~~~l~~li~~cl~~~P~~RPt~~evl~~ 506 (557)
.+..+.+++.+||..||++|||+.|+++.
T Consensus 230 ----~s~~~~~li~~~L~~dp~~Rpt~~e~l~h 258 (321)
T 1tki_A 230 ----ISIEAMDFVDRLLVKERKSRMTASEALQH 258 (321)
T ss_dssp ----SCHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred ----CCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence 23468899999999999999999999984
No 68
>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}
Probab=100.00 E-value=7.4e-42 Score=344.85 Aligned_cols=263 Identities=26% Similarity=0.417 Sum_probs=196.5
Q ss_pred HHHHHhhcccCCCCceEEEEEEEcCC----cEEEEEEccCc--cchhHHHHHHHHHHHhhcCCCCccceeeEEEecCee-
Q 008707 234 EATNNFCKKIGKGSFGSVYYGKMKDG----KEVAVKIMADS--CSHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQR- 306 (557)
Q Consensus 234 ~~~~~~~~~lG~G~~g~Vy~~~~~~~----~~vavK~~~~~--~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~- 306 (557)
...|++.+.||+|+||.||+|.+... ..||+|++... .....+.+.+|+++++.++||||+++++++......
T Consensus 22 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 101 (323)
T 3qup_A 22 EQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKLVGVSLRSRAKG 101 (323)
T ss_dssp ---CEEEEEEEEETTEEEEEEEC-------CEEEEEEC------CHHHHHHHHHHHHHTTCCCTTBCCCCEEEECC----
T ss_pred hhHeEEeceecccCCeEEEEEEEcccCCcceeEEEEEecccccCHHHHHHHHHHHHHHHHCCCCceehhhceeecccccc
Confidence 34567789999999999999987643 27999998754 334567899999999999999999999999876655
Q ss_pred -----EEEEEecCCCChhhhhhccC---CCCCcCHHHHHHHHHHHHHHHHHHHcCCCCCeEeeccCCCCEEeCCCCcEEE
Q 008707 307 -----ILVYEYMHNGTLRDRLHGSV---NQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKV 378 (557)
Q Consensus 307 -----~lv~e~~~~gsL~~~l~~~~---~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl 378 (557)
++||||+++|+|.+++.... ....+++..++.++.|++.||+|||+ .+++||||||+||+++.++.+||
T Consensus 102 ~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~---~~ivH~Dikp~NIli~~~~~~kl 178 (323)
T 3qup_A 102 RLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLSS---RNFIHRDLAARNCMLAEDMTVCV 178 (323)
T ss_dssp ---CEEEEEECCTTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEECTTSCEEE
T ss_pred CCCccEEEEEeccCCcHHHHHHhhhccccccccCHHHHHHHHHHHHHHHHHHHc---CCcccCCCCcceEEEcCCCCEEE
Confidence 89999999999999986432 22368999999999999999999998 99999999999999999999999
Q ss_pred ecccCccccCCCCc-cccccccCCCCccCCcccCCCCCCcccceehhHHHHHHHHh-CCCCCCCCCccccccHHHHHHHH
Q 008707 379 SDFGLSRQAEEDLT-HISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELIS-GKKPVSVEDFGAELNIVHWARSM 456 (557)
Q Consensus 379 ~Dfgla~~~~~~~~-~~~~~~~g~~~y~aPE~l~~~~~s~~~DvwslG~ll~ellt-g~~pf~~~~~~~~~~~~~~~~~~ 456 (557)
+|||++........ .......+++.|+|||.+.+..++.++||||||+++|+|++ |..||....... ... .
T Consensus 179 ~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~---~~~----~ 251 (323)
T 3qup_A 179 ADFGLSRKIYSGDYYRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGIENAE---IYN----Y 251 (323)
T ss_dssp CCCCC-----------------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGG---HHH----H
T ss_pred eeccccccccccccccccccccCcccccCchhhcCCCCCCccchhhHHHHHHHHHhCCCCCccccChHH---HHH----H
Confidence 99999987644322 11223346788999999999999999999999999999999 999997543322 111 1
Q ss_pred HhcCCccccccccccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhhhhhc
Q 008707 457 IKKGDVISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKIEK 515 (557)
Q Consensus 457 ~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~evl~~L~~~~~~~~ 515 (557)
+..+.... .....+..+.+++.+||+.||++|||+.|+++.|+++.....
T Consensus 252 ~~~~~~~~---------~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~l~~~~ 301 (323)
T 3qup_A 252 LIGGNRLK---------QPPECMEEVYDLMYQCWSADPKQRPSFTCLRMELENILGHLS 301 (323)
T ss_dssp HHTTCCCC---------CCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHC--
T ss_pred HhcCCCCC---------CCCccCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHHhh
Confidence 11111111 111223478899999999999999999999999999987543
No 69
>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*
Probab=100.00 E-value=8.3e-42 Score=349.64 Aligned_cols=262 Identities=27% Similarity=0.426 Sum_probs=209.1
Q ss_pred HHHHhhcccCCCCceEEEEEEEc------CCcEEEEEEccCccc-hhHHHHHHHHHHHhhc-CCCCccceeeEEEecC-e
Q 008707 235 ATNNFCKKIGKGSFGSVYYGKMK------DGKEVAVKIMADSCS-HRTQQFVTEVALLSRI-HHRNLVPLIGYCEEEH-Q 305 (557)
Q Consensus 235 ~~~~~~~~lG~G~~g~Vy~~~~~------~~~~vavK~~~~~~~-~~~~~~~~E~~il~~l-~h~nIv~~~~~~~~~~-~ 305 (557)
..|++.+.||+|+||.||+|.+. +++.||||++..... ...+.+.+|++++.++ +||||+++++++.+.+ .
T Consensus 22 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~ 101 (359)
T 3vhe_A 22 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGP 101 (359)
T ss_dssp GGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTSC
T ss_pred cceeeceeecCCCCceEEEEEeccccccccceEEEEEEecCcCCHHHHHHHHHHHHHHHhhcCCcceeeeeeeeecCCCc
Confidence 44566899999999999999743 357899999976433 3456799999999999 7999999999988755 4
Q ss_pred eEEEEEecCCCChhhhhhccCC----------------------------------------------------------
Q 008707 306 RILVYEYMHNGTLRDRLHGSVN---------------------------------------------------------- 327 (557)
Q Consensus 306 ~~lv~e~~~~gsL~~~l~~~~~---------------------------------------------------------- 327 (557)
.++||||+++|+|.+++.....
T Consensus 102 ~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (359)
T 3vhe_A 102 LMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSGFVEEKSLSDVEEEEA 181 (359)
T ss_dssp CEEEEECCTTEEHHHHHHTTTTSBCSCC----------------------------------------------------
T ss_pred eEEEEEecCCCcHHHHHHhccccccccccccchhhcccccccccchhhhccccccCccccccccccccccccchhhhccc
Confidence 8999999999999999975421
Q ss_pred -----CCCcCHHHHHHHHHHHHHHHHHHHcCCCCCeEeeccCCCCEEeCCCCcEEEecccCccccCCCCc-cccccccCC
Q 008707 328 -----QKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEEDLT-HISSVARGT 401 (557)
Q Consensus 328 -----~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfgla~~~~~~~~-~~~~~~~g~ 401 (557)
...+++..++.++.|++.||+|||+ .+|+||||||+|||++.++.+||+|||++........ .......||
T Consensus 182 ~~~~~~~~l~~~~~~~~~~ql~~aL~~LH~---~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~t 258 (359)
T 3vhe_A 182 PEDLYKDFLTLEHLICYSFQVAKGMEFLAS---RKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLP 258 (359)
T ss_dssp --CTTTTCBCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEECGGGCEEECCCGGGSCTTSCTTCEEC--CEEC
T ss_pred ccchhccccCHHHHHHHHHHHHHHHHHHHH---CCcccCCCChhhEEEcCCCcEEEEeccceeeecccccchhccccCCC
Confidence 1228999999999999999999999 9999999999999999999999999999987643322 223344578
Q ss_pred CCccCCcccCCCCCCcccceehhHHHHHHHHh-CCCCCCCCCccccccHHHHHHHHHhcCCccccccccccCCCCHHHHH
Q 008707 402 VGYLDPEYYGNQQLTEKSDVYSFGVVLLELIS-GKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPVLIGNVKIESIW 480 (557)
Q Consensus 402 ~~y~aPE~l~~~~~s~~~DvwslG~ll~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~ 480 (557)
+.|+|||++.+..++.++||||||+++|||+| |+.||........ +...+..+..... +.....
T Consensus 259 ~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~------~~~~~~~~~~~~~---------~~~~~~ 323 (359)
T 3vhe_A 259 LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEE------FCRRLKEGTRMRA---------PDYTTP 323 (359)
T ss_dssp GGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHH------HHHHHHHTCCCCC---------CTTCCH
T ss_pred ceeEChhhhcCCCCCchhhhhhHHHHHHHHHhcCCCCCCccchhHH------HHHHHHcCCCCCC---------CCCCCH
Confidence 89999999999999999999999999999998 9999975443221 1122222221111 111234
Q ss_pred HHHHHHHHccccCCCCCCCHHHHHHHHHhhhhhh
Q 008707 481 RIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKIE 514 (557)
Q Consensus 481 ~l~~li~~cl~~~P~~RPt~~evl~~L~~~~~~~ 514 (557)
.+.+++.+||+.||++|||++||++.|+++....
T Consensus 324 ~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~~ 357 (359)
T 3vhe_A 324 EMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQAN 357 (359)
T ss_dssp HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHccCChhhCCCHHHHHHHHHHHHHHh
Confidence 6889999999999999999999999999988653
No 70
>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}
Probab=100.00 E-value=3.3e-41 Score=340.96 Aligned_cols=250 Identities=22% Similarity=0.321 Sum_probs=197.6
Q ss_pred HHHHhhcccCCCCceEEEEEEEc-CCcEEEEEEccCcc-chhHHHHHHHHHHHhhcCCCCccceeeEEEecC--------
Q 008707 235 ATNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSC-SHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEH-------- 304 (557)
Q Consensus 235 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~-------- 304 (557)
..|++.+.||+|+||.||+|.+. +|+.||||++.... ....+.+.+|++++++++||||+++++++.+..
T Consensus 6 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~ 85 (332)
T 3qd2_B 6 TDFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLETPPEKWQEEM 85 (332)
T ss_dssp HHEEEEEEEECC-CSEEEEEEETTTCCEEEEEEEECCSTTTHHHHHHHHHHHHTSCCCTTBCCEEEEEEECCSCHHHHHH
T ss_pred hcCceeeEecCCCCeEEEEEEEcCCCcEEEEEEeecCCchhHHHHHHHHHHHHHhCCCCCEeeEEEEEEEeccchhhhhh
Confidence 34566899999999999999986 79999999986433 335578999999999999999999999986543
Q ss_pred -------------------------------------------------eeEEEEEecCCCChhhhhhccCCCCCcCHHH
Q 008707 305 -------------------------------------------------QRILVYEYMHNGTLRDRLHGSVNQKPLDWLT 335 (557)
Q Consensus 305 -------------------------------------------------~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~ 335 (557)
..++||||+++++|.+++.........++..
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~ 165 (332)
T 3qd2_B 86 DEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRCSLEDREHGV 165 (332)
T ss_dssp HC--------------------------------------------CCCEEEEEEECCCSSCHHHHHHTCCSGGGSCHHH
T ss_pred hhhhhccccccccccCCCcccccccceeeccccCcccccccccCCCCCceEEEEEEecCCCCHHHHHhcccCccchhhHH
Confidence 2789999999999999998655445567777
Q ss_pred HHHHHHHHHHHHHHHHcCCCCCeEeeccCCCCEEeCCCCcEEEecccCccccCCCCc-----------cccccccCCCCc
Q 008707 336 RLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEEDLT-----------HISSVARGTVGY 404 (557)
Q Consensus 336 ~~~i~~qia~aL~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfgla~~~~~~~~-----------~~~~~~~g~~~y 404 (557)
++.++.||+.||+|||+ .+++||||||+||+++.++.+||+|||++........ .......||+.|
T Consensus 166 ~~~i~~qi~~aL~~LH~---~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y 242 (332)
T 3qd2_B 166 CLHIFIQIAEAVEFLHS---KGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQVGTKLY 242 (332)
T ss_dssp HHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTCCEEECCCTTCEECSCC--------------CCCSCC-CGGG
T ss_pred HHHHHHHHHHHHHHHHh---CCeeecCCCcccEEEeCCCCEEEeecCcccccccchhhccccccccccccccccCCCcCc
Confidence 89999999999999998 9999999999999999999999999999987654421 112234589999
Q ss_pred cCCcccCCCCCCcccceehhHHHHHHHHhCCCCCCCCCccccccHHHHHHHHHhcCCccccccccccCCCCHHHHHHHHH
Q 008707 405 LDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPVLIGNVKIESIWRIAE 484 (557)
Q Consensus 405 ~aPE~l~~~~~s~~~DvwslG~ll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~ 484 (557)
+|||.+.+..++.++||||||+++|||++|..|+.. ... .......+.... ........+.+
T Consensus 243 ~aPE~~~~~~~~~~~Di~slG~il~el~~~~~~~~~--------~~~-~~~~~~~~~~~~---------~~~~~~~~~~~ 304 (332)
T 3qd2_B 243 MSPEQIHGNNYSHKVDIFSLGLILFELLYSFSTQME--------RVR-IITDVRNLKFPL---------LFTQKYPQEHM 304 (332)
T ss_dssp SCHHHHHCCCCCTHHHHHHHHHHHHHHHSCCCCHHH--------HHH-HHHHHHTTCCCH---------HHHHHCHHHHH
T ss_pred cChHHhcCCCCcchhhHHHHHHHHHHHHHcCCChhH--------HHH-HHHHhhccCCCc---------ccccCChhHHH
Confidence 999999999999999999999999999998776531 111 111111111110 11223346789
Q ss_pred HHHHccccCCCCCCCHHHHHH
Q 008707 485 VAIQCVEQRGFSRPKMQEIVL 505 (557)
Q Consensus 485 li~~cl~~~P~~RPt~~evl~ 505 (557)
++.+||+.||++|||++|+++
T Consensus 305 li~~~l~~~p~~Rps~~~~l~ 325 (332)
T 3qd2_B 305 MVQDMLSPSPTERPEATDIIE 325 (332)
T ss_dssp HHHHHHCSSGGGSCCHHHHHH
T ss_pred HHHHHccCCCCcCCCHHHHhh
Confidence 999999999999999999986
No 71
>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*
Probab=100.00 E-value=4.3e-42 Score=345.93 Aligned_cols=262 Identities=24% Similarity=0.398 Sum_probs=208.6
Q ss_pred HhhcccCCCCceEEEEEEEc-----CCcEEEEEEccCcc-chhHHHHHHHHHHHhhcCCCCccceeeEEEec--CeeEEE
Q 008707 238 NFCKKIGKGSFGSVYYGKMK-----DGKEVAVKIMADSC-SHRTQQFVTEVALLSRIHHRNLVPLIGYCEEE--HQRILV 309 (557)
Q Consensus 238 ~~~~~lG~G~~g~Vy~~~~~-----~~~~vavK~~~~~~-~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~--~~~~lv 309 (557)
++.+.||+|+||.||++.+. +++.||+|++.... ....+.+.+|+++++.++||||+++++++.+. ...++|
T Consensus 34 ~~~~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv 113 (318)
T 3lxp_A 34 KKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAASLQLV 113 (318)
T ss_dssp EEEEEEEECSSEEEEEEEECSCC--CCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTTTEEEEE
T ss_pred hhhheecCCCCeEEEEEEEccCCCCCCcEEEEEEeccccChHHHHHHHHHHHHHHhCCCcchhhEEEEEecCCCceEEEE
Confidence 56789999999999998653 58899999987643 34456799999999999999999999999874 578999
Q ss_pred EEecCCCChhhhhhccCCCCCcCHHHHHHHHHHHHHHHHHHHcCCCCCeEeeccCCCCEEeCCCCcEEEecccCccccCC
Q 008707 310 YEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEE 389 (557)
Q Consensus 310 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfgla~~~~~ 389 (557)
|||+++|+|.+++.. ..+++..++.++.|++.||+|||+ .+++||||||+||+++.++.+||+|||++.....
T Consensus 114 ~e~~~~~~L~~~l~~----~~~~~~~~~~i~~~l~~~l~~LH~---~~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~~ 186 (318)
T 3lxp_A 114 MEYVPLGSLRDYLPR----HSIGLAQLLLFAQQICEGMAYLHA---QHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPE 186 (318)
T ss_dssp ECCCTTCBHHHHGGG----SCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTCCEEECCGGGCEECCT
T ss_pred EecccCCcHHHHHhh----CCCCHHHHHHHHHHHHHHHHHHHh---CCccCCCCchheEEEcCCCCEEECCccccccccc
Confidence 999999999999974 348999999999999999999998 9999999999999999999999999999987654
Q ss_pred CCc--cccccccCCCCccCCcccCCCCCCcccceehhHHHHHHHHhCCCCCCCCCccc--------cccHHHHHHHHHhc
Q 008707 390 DLT--HISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGA--------ELNIVHWARSMIKK 459 (557)
Q Consensus 390 ~~~--~~~~~~~g~~~y~aPE~l~~~~~s~~~DvwslG~ll~elltg~~pf~~~~~~~--------~~~~~~~~~~~~~~ 459 (557)
... .......+++.|+|||.+.+..++.++||||||+++|+|+||..||....... ...........+..
T Consensus 187 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (318)
T 3lxp_A 187 GHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMTVLRLTELLER 266 (318)
T ss_dssp TCSEEEC---CCCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCHHHHHHHHHHHHHT
T ss_pred cccccccccCCCCCceeeChHHhcCCCCCcHHHHHHHHHHHHHHHhCCCcccccchhhhhhhcccccchhHHHHHHHHhc
Confidence 332 12233457888999999999899999999999999999999999997432110 00001111222222
Q ss_pred CCccccccccccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhhhhhc
Q 008707 460 GDVISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKIEK 515 (557)
Q Consensus 460 ~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~evl~~L~~~~~~~~ 515 (557)
+... ......+..+.+++.+||+.||++|||++||++.|+.+.+.-.
T Consensus 267 ~~~~---------~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l~~~~~ 313 (318)
T 3lxp_A 267 GERL---------PRPDKCPAEVYHLMKNCWETEASFRPTFENLIPILKTVHEKYQ 313 (318)
T ss_dssp TCCC---------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHH
T ss_pred ccCC---------CCCccccHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHHhhc
Confidence 2111 1122233478899999999999999999999999999887544
No 72
>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A
Probab=100.00 E-value=2.8e-41 Score=335.06 Aligned_cols=259 Identities=19% Similarity=0.278 Sum_probs=197.7
Q ss_pred HHhhcccCCCCceEEEEEEEcCCcEEEEEEccCccc--hhHHHHHHHHHHHhhcCCCCccceeeEEEecCeeEEEEEecC
Q 008707 237 NNFCKKIGKGSFGSVYYGKMKDGKEVAVKIMADSCS--HRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYEYMH 314 (557)
Q Consensus 237 ~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~lv~e~~~ 314 (557)
|++.+.||+|+||.||+|...+|+.||+|++..... ...+.+.+|+++++.++||||+++++++.+.+..++||||++
T Consensus 4 y~~~~~lg~G~~g~V~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~ 83 (288)
T 1ob3_A 4 YHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEHLD 83 (288)
T ss_dssp EEEEEEEEEETTEEEEEEEETTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSCEEEEEECCS
T ss_pred chhhhhcccCCCEEEEEEEcCCCCEEEEEEEeccccccccchhHHHHHHHHHhcCCCCEeeeeeEEccCCeEEEEEEecC
Confidence 446789999999999999998899999999865432 234678899999999999999999999999999999999997
Q ss_pred CCChhhhhhccCCCCCcCHHHHHHHHHHHHHHHHHHHcCCCCCeEeeccCCCCEEeCCCCcEEEecccCccccCCCCccc
Q 008707 315 NGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEEDLTHI 394 (557)
Q Consensus 315 ~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfgla~~~~~~~~~~ 394 (557)
+ +|.+++... ...+++..+..++.|++.||+|||+ ++|+||||||+||+++.++.+||+|||++.........
T Consensus 84 ~-~l~~~~~~~--~~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~- 156 (288)
T 1ob3_A 84 Q-DLKKLLDVC--EGGLESVTAKSFLLQLLNGIAYCHD---RRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRK- 156 (288)
T ss_dssp E-EHHHHHHTS--TTCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECTTSCEEECCTTHHHHHCC-----
T ss_pred C-CHHHHHHhc--ccCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHEEEcCCCCEEEeECccccccCccccc-
Confidence 5 898888743 4568999999999999999999998 99999999999999999999999999999876433221
Q ss_pred cccccCCCCccCCcccCC-CCCCcccceehhHHHHHHHHhCCCCCCCCCccccccHHHHHHHHHhcCCcc--------cc
Q 008707 395 SSVARGTVGYLDPEYYGN-QQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVI--------SI 465 (557)
Q Consensus 395 ~~~~~g~~~y~aPE~l~~-~~~s~~~DvwslG~ll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~--------~~ 465 (557)
.....||+.|+|||.+.+ ..++.++||||+|+++|+|++|+.||...+..+ ............... ..
T Consensus 157 ~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (288)
T 1ob3_A 157 YTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEAD---QLMRIFRILGTPNSKNWPNVTELPK 233 (288)
T ss_dssp -----CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH---HHHHHHHHHCCCCTTTSTTGGGSTT
T ss_pred cccccccccccCchheeCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH---HHHHHHHHHCCCChhhchhhhcccc
Confidence 223357999999999876 458999999999999999999999997543221 111111111111100 00
Q ss_pred cccccc-------CCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 008707 466 VDPVLI-------GNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 505 (557)
Q Consensus 466 ~d~~l~-------~~~~~~~~~~l~~li~~cl~~~P~~RPt~~evl~ 505 (557)
+++... ..........+.+++.+||+.||++|||++|+++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 280 (288)
T 1ob3_A 234 YDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALE 280 (288)
T ss_dssp CCTTCCCCCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred cccccccccCccHHHHhhhcCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence 111110 0011122346789999999999999999999975
No 73
>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...
Probab=100.00 E-value=1.1e-41 Score=345.29 Aligned_cols=265 Identities=24% Similarity=0.438 Sum_probs=212.1
Q ss_pred HHHHHhhcccCCCCceEEEEEEEc--------CCcEEEEEEccCcc-chhHHHHHHHHHHHhhc-CCCCccceeeEEEec
Q 008707 234 EATNNFCKKIGKGSFGSVYYGKMK--------DGKEVAVKIMADSC-SHRTQQFVTEVALLSRI-HHRNLVPLIGYCEEE 303 (557)
Q Consensus 234 ~~~~~~~~~lG~G~~g~Vy~~~~~--------~~~~vavK~~~~~~-~~~~~~~~~E~~il~~l-~h~nIv~~~~~~~~~ 303 (557)
...|++.+.||+|+||.||+|.+. ++..||+|++.... ....+.+.+|+++++.+ +||||+++++++.+.
T Consensus 34 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~ 113 (334)
T 2pvf_A 34 RDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQD 113 (334)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred HhHeEEeeEEeecCceeEEEeEeccccccccccceEEEEeeeccCCcHHHHHHHHHHHHHHHHhhcCCCEeeEEEEEccC
Confidence 345667899999999999999863 46789999987543 33456789999999999 899999999999999
Q ss_pred CeeEEEEEecCCCChhhhhhccCC-------------CCCcCHHHHHHHHHHHHHHHHHHHcCCCCCeEeeccCCCCEEe
Q 008707 304 HQRILVYEYMHNGTLRDRLHGSVN-------------QKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILL 370 (557)
Q Consensus 304 ~~~~lv~e~~~~gsL~~~l~~~~~-------------~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~dlk~~NIll 370 (557)
+..++||||+++|+|.+++..... ...+++..++.++.||+.||+|||+ .+++||||||+||++
T Consensus 114 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dlkp~NIll 190 (334)
T 2pvf_A 114 GPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLAS---QKCIHRDLAARNVLV 190 (334)
T ss_dssp SCCEEEEECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEE
T ss_pred CceEEEEECCCCCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHh---CCeeCCCCccceEEE
Confidence 999999999999999999975421 2348899999999999999999998 999999999999999
Q ss_pred CCCCcEEEecccCccccCCCCcc-ccccccCCCCccCCcccCCCCCCcccceehhHHHHHHHHh-CCCCCCCCCcccccc
Q 008707 371 DINMRAKVSDFGLSRQAEEDLTH-ISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELIS-GKKPVSVEDFGAELN 448 (557)
Q Consensus 371 ~~~~~~kl~Dfgla~~~~~~~~~-~~~~~~g~~~y~aPE~l~~~~~s~~~DvwslG~ll~ellt-g~~pf~~~~~~~~~~ 448 (557)
+.++.+||+|||++......... ......+++.|+|||.+.+..++.++||||||+++|+|++ |..||.......
T Consensus 191 ~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~--- 267 (334)
T 2pvf_A 191 TENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEE--- 267 (334)
T ss_dssp CTTCCEEECCCTTCEECTTTSSEECCSCCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCHHH---
T ss_pred cCCCCEEEccccccccccccccccccCCCCcccceeChHHhcCCCcChHHHHHHHHHHHHHHHhCCCCCcCcCCHHH---
Confidence 99999999999999876543221 1223346788999999988889999999999999999999 999997443211
Q ss_pred HHHHHHHHHhcCCccccccccccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhhhhhcCC
Q 008707 449 IVHWARSMIKKGDVISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKIEKGG 517 (557)
Q Consensus 449 ~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~evl~~L~~~~~~~~~~ 517 (557)
....+..+.... .....+..+.+++.+||+.+|.+|||+.||++.|+++.......
T Consensus 268 ----~~~~~~~~~~~~---------~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~l~~~~~~~ 323 (334)
T 2pvf_A 268 ----LFKLLKEGHRMD---------KPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILTLTTNE 323 (334)
T ss_dssp ----HHHHHHHTCCCC---------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHC--
T ss_pred ----HHHHHhcCCCCC---------CCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhccccC
Confidence 112222222111 11122347889999999999999999999999999999876544
No 74
>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}
Probab=100.00 E-value=2.2e-41 Score=349.38 Aligned_cols=248 Identities=22% Similarity=0.345 Sum_probs=197.8
Q ss_pred HHHhhcccCCCCceEEEEEEEc-CCcEEEEEEccCcc---chhHHHHHHHHHHHhhc-CCCCccceeeEEEecCeeEEEE
Q 008707 236 TNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSC---SHRTQQFVTEVALLSRI-HHRNLVPLIGYCEEEHQRILVY 310 (557)
Q Consensus 236 ~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~il~~l-~h~nIv~~~~~~~~~~~~~lv~ 310 (557)
.+++.+.||+|+||.||+|..+ +++.||+|++++.. ....+.+.+|..++.++ +||||+++++++.+.+..++||
T Consensus 53 ~y~~~~~LG~G~fG~V~~~~~~~~~~~~AvK~~~k~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~lV~ 132 (396)
T 4dc2_A 53 DFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVI 132 (396)
T ss_dssp GEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGTC----CCHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEEEE
T ss_pred HcEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhcCCCCCcCeeEEEEEECCEEEEEE
Confidence 3456789999999999999876 57899999987542 22334578899999887 8999999999999999999999
Q ss_pred EecCCCChhhhhhccCCCCCcCHHHHHHHHHHHHHHHHHHHcCCCCCeEeeccCCCCEEeCCCCcEEEecccCccccCCC
Q 008707 311 EYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEED 390 (557)
Q Consensus 311 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfgla~~~~~~ 390 (557)
||+++|+|.+++.. ...+++..+..++.||+.||+|||+ .+|+||||||+|||++.++.+||+|||+++.....
T Consensus 133 E~~~gg~L~~~l~~---~~~l~~~~~~~~~~qi~~aL~~LH~---~givHrDLKp~NILl~~~g~ikL~DFGla~~~~~~ 206 (396)
T 4dc2_A 133 EYVNGGDLMFHMQR---QRKLPEEHARFYSAEISLALNYLHE---RGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRP 206 (396)
T ss_dssp ECCTTCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCCGGGEEECTTSCEEECCCTTCBCCCCT
T ss_pred EcCCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHH---CCEEeccCCHHHEEECCCCCEEEeecceeeecccC
Confidence 99999999999874 3568999999999999999999998 99999999999999999999999999999863322
Q ss_pred CccccccccCCCCccCCcccCCCCCCcccceehhHHHHHHHHhCCCCCCCCCccc--cccHHHHHHHHHhcCCccccccc
Q 008707 391 LTHISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGA--ELNIVHWARSMIKKGDVISIVDP 468 (557)
Q Consensus 391 ~~~~~~~~~g~~~y~aPE~l~~~~~s~~~DvwslG~ll~elltg~~pf~~~~~~~--~~~~~~~~~~~~~~~~~~~~~d~ 468 (557)
.. ......||+.|+|||++.+..++.++|||||||++|||++|+.||....... .......+...+..+...
T Consensus 207 ~~-~~~~~~gt~~Y~aPE~l~~~~~~~~~DiwslGvllyell~G~~Pf~~~~~~~~~~~~~~~~~~~~i~~~~~~----- 280 (396)
T 4dc2_A 207 GD-TTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIR----- 280 (396)
T ss_dssp TC-CBCCCCBCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSTTTTC------CCHHHHHHHHHHCCCC-----
T ss_pred CC-ccccccCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCcccccccccchhhHHHHHHHHhccccC-----
Confidence 22 2344569999999999999999999999999999999999999997443221 111122222333322211
Q ss_pred cccCCCCHHHHHHHHHHHHHccccCCCCCCCH
Q 008707 469 VLIGNVKIESIWRIAEVAIQCVEQRGFSRPKM 500 (557)
Q Consensus 469 ~l~~~~~~~~~~~l~~li~~cl~~~P~~RPt~ 500 (557)
.+......+.+++.+||+.||++||++
T Consensus 281 -----~p~~~s~~~~~li~~lL~~dP~~R~~~ 307 (396)
T 4dc2_A 281 -----IPRSLSVKAASVLKSFLNKDPKERLGC 307 (396)
T ss_dssp -----CCTTSCHHHHHHHHHHTCSCTTTSTTC
T ss_pred -----CCCcCCHHHHHHHHHHhcCCHhHcCCC
Confidence 111123468899999999999999996
No 75
>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*
Probab=100.00 E-value=4.1e-41 Score=333.44 Aligned_cols=252 Identities=31% Similarity=0.519 Sum_probs=200.5
Q ss_pred HHHHhhcccCCCCceEEEEEEEc-CCcEEEEEEccCccchh-------HHHHHHHHHHHhhcCCCCccceeeEEEecCee
Q 008707 235 ATNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCSHR-------TQQFVTEVALLSRIHHRNLVPLIGYCEEEHQR 306 (557)
Q Consensus 235 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~-------~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~ 306 (557)
..|++.+.||+|+||.||+|.+. +++.||+|++....... .+.+.+|+++++.++||||+++++++.+..
T Consensus 19 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~-- 96 (287)
T 4f0f_A 19 NEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHNPP-- 96 (287)
T ss_dssp TTEEEEEECCCCSSSCEEEEEETTTCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTCCCTTBCCEEEEETTTT--
T ss_pred ccceehhccccCCceeEEEEEEcCCceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhCCCCCchhhheeecCCC--
Confidence 44566789999999999999875 68999999986432211 167889999999999999999999987654
Q ss_pred EEEEEecCCCChhhhhhccCCCCCcCHHHHHHHHHHHHHHHHHHHcCCCCC--eEeeccCCCCEEeCCCCc-----EEEe
Q 008707 307 ILVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPG--IIHRDVKSSNILLDINMR-----AKVS 379 (557)
Q Consensus 307 ~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~--ivH~dlk~~NIll~~~~~-----~kl~ 379 (557)
++||||+++|+|.+.+.. ....+++..++.++.|++.||+|||+ .+ ++||||||+||+++.++. +||+
T Consensus 97 ~lv~e~~~~~~L~~~l~~--~~~~~~~~~~~~~~~~l~~~l~~lH~---~~~~ivH~dikp~Nil~~~~~~~~~~~~kl~ 171 (287)
T 4f0f_A 97 RMVMEFVPCGDLYHRLLD--KAHPIKWSVKLRLMLDIALGIEYMQN---QNPPIVHRDLRSPNIFLQSLDENAPVCAKVA 171 (287)
T ss_dssp EEEEECCTTCBHHHHHHC--TTSCCCHHHHHHHHHHHHHHHHHHHT---SSSCCBCSCCSGGGEEESCCCTTCSCCEEEC
T ss_pred eEEEEecCCCCHHHHHhc--ccCCccHHHHHHHHHHHHHHHHHHHh---CCCCeecCCCCcceEEEeccCCCCceeEEeC
Confidence 699999999999998864 34578999999999999999999998 88 999999999999988776 9999
Q ss_pred cccCccccCCCCccccccccCCCCccCCccc--CCCCCCcccceehhHHHHHHHHhCCCCCCCCCccccccHHHHHHHHH
Q 008707 380 DFGLSRQAEEDLTHISSVARGTVGYLDPEYY--GNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMI 457 (557)
Q Consensus 380 Dfgla~~~~~~~~~~~~~~~g~~~y~aPE~l--~~~~~s~~~DvwslG~ll~elltg~~pf~~~~~~~~~~~~~~~~~~~ 457 (557)
|||++...... .....||+.|+|||.+ ....++.++||||||+++|+|++|+.||........ .......
T Consensus 172 Dfg~~~~~~~~----~~~~~g~~~y~aPE~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~----~~~~~~~ 243 (287)
T 4f0f_A 172 DFGLSQQSVHS----VSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKI----KFINMIR 243 (287)
T ss_dssp CCTTCBCCSSC----EECCCCCCTTSCGGGSSCSSCEECHHHHHHHHHHHHHHHHHSSCTTTTCCCCHH----HHHHHHH
T ss_pred CCCcccccccc----ccccCCCccccCchhhccCCCCcCchhhHHHHHHHHHHHHcCCCCCccccccHH----HHHHHHh
Confidence 99999765432 2334589999999998 445678899999999999999999999974433221 1111111
Q ss_pred hcCCccccccccccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhh
Q 008707 458 KKGDVISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDS 510 (557)
Q Consensus 458 ~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~evl~~L~~~ 510 (557)
..+.. + ..+...+..+.+++.+||+.||++|||++||++.|+++
T Consensus 244 ~~~~~-----~----~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~l 287 (287)
T 4f0f_A 244 EEGLR-----P----TIPEDCPPRLRNVIELCWSGDPKKRPHFSYIVKELSEL 287 (287)
T ss_dssp HSCCC-----C----CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTC
T ss_pred ccCCC-----C----CCCcccCHHHHHHHHHHhcCChhhCcCHHHHHHHHHhC
Confidence 11111 1 11122234788999999999999999999999999863
No 76
>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}
Probab=100.00 E-value=6.9e-41 Score=333.85 Aligned_cols=246 Identities=28% Similarity=0.395 Sum_probs=193.4
Q ss_pred HHhhcccCCCCceEEEEEEEc-CCcEEEEEEccCccc--------------------------hhHHHHHHHHHHHhhcC
Q 008707 237 NNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCS--------------------------HRTQQFVTEVALLSRIH 289 (557)
Q Consensus 237 ~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--------------------------~~~~~~~~E~~il~~l~ 289 (557)
|++.+.||+|+||.||+|... +++.||+|++..... ...+.+.+|+++++.++
T Consensus 15 y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~ 94 (298)
T 2zv2_A 15 YTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAILKKLD 94 (298)
T ss_dssp EEEEEEEEC--CCEEEEEEETTTTEEEEEEEEECC-------------------------------CHHHHHHHHHHTCC
T ss_pred eEEEeEEeecCCEEEEEEEECCCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHHHHHHhCC
Confidence 456789999999999999875 588999999864321 11246889999999999
Q ss_pred CCCccceeeEEEe--cCeeEEEEEecCCCChhhhhhccCCCCCcCHHHHHHHHHHHHHHHHHHHcCCCCCeEeeccCCCC
Q 008707 290 HRNLVPLIGYCEE--EHQRILVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSN 367 (557)
Q Consensus 290 h~nIv~~~~~~~~--~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~dlk~~N 367 (557)
||||+++++++.+ .+..++||||+++++|.+++. ...+++..+..++.||++||+|||+ .+++||||||+|
T Consensus 95 h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~----~~~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~Dlkp~N 167 (298)
T 2zv2_A 95 HPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPT----LKPLSEDQARFYFQDLIKGIEYLHY---QKIIHRDIKPSN 167 (298)
T ss_dssp CTTBCCEEEEEECSSSSEEEEEEECCTTCBSCCSSC----SSCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGG
T ss_pred CCCCCeEEEEEEcCCCCEEEEEEecCCCCcHHHHhh----cCCCCHHHHHHHHHHHHHHHHHHHH---CCeeccCCCHHH
Confidence 9999999999986 567899999999999988654 4578999999999999999999998 999999999999
Q ss_pred EEeCCCCcEEEecccCccccCCCCccccccccCCCCccCCcccCCCC---CCcccceehhHHHHHHHHhCCCCCCCCCcc
Q 008707 368 ILLDINMRAKVSDFGLSRQAEEDLTHISSVARGTVGYLDPEYYGNQQ---LTEKSDVYSFGVVLLELISGKKPVSVEDFG 444 (557)
Q Consensus 368 Ill~~~~~~kl~Dfgla~~~~~~~~~~~~~~~g~~~y~aPE~l~~~~---~s~~~DvwslG~ll~elltg~~pf~~~~~~ 444 (557)
|+++.++.+||+|||++......... .....||+.|+|||.+.+.. ++.++||||||+++|+|++|+.||.....
T Consensus 168 il~~~~~~~kl~Dfg~~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~- 245 (298)
T 2zv2_A 168 LLVGEDGHIKIADFGVSNEFKGSDAL-LSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMDERI- 245 (298)
T ss_dssp EEECTTSCEEECCCTTCEECSSSSCE-ECCCCSCGGGCCGGGCCTTCCCEESHHHHHHHHHHHHHHHHHSSCSSCCSSH-
T ss_pred EEECCCCCEEEecCCCcccccccccc-ccCCcCCccccChhhhccCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCccH-
Confidence 99999999999999999876543322 23345899999999998765 47889999999999999999999974322
Q ss_pred ccccHHHHHHHHHhcCCccccccccccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 008707 445 AELNIVHWARSMIKKGDVISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 505 (557)
Q Consensus 445 ~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~evl~ 505 (557)
... ...+..+.... .+ ... .+..+.+++.+||+.||++|||++|+++
T Consensus 246 -----~~~-~~~~~~~~~~~-~~---~~~----~~~~l~~li~~~l~~dp~~R~s~~e~l~ 292 (298)
T 2zv2_A 246 -----MCL-HSKIKSQALEF-PD---QPD----IAEDLKDLITRMLDKNPESRIVVPEIKL 292 (298)
T ss_dssp -----HHH-HHHHHHCCCCC-CS---SSC----CCHHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred -----HHH-HHHHhcccCCC-CC---ccc----cCHHHHHHHHHHhhcChhhCCCHHHHhc
Confidence 111 11222221110 00 111 2236889999999999999999999975
No 77
>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A
Probab=100.00 E-value=5.2e-41 Score=344.55 Aligned_cols=268 Identities=17% Similarity=0.233 Sum_probs=204.7
Q ss_pred HHHhhcccCCCCceEEEEEEEcC------CcEEEEEEccCccchh-----------HHHHHHHHHHHhhcCCCCccceee
Q 008707 236 TNNFCKKIGKGSFGSVYYGKMKD------GKEVAVKIMADSCSHR-----------TQQFVTEVALLSRIHHRNLVPLIG 298 (557)
Q Consensus 236 ~~~~~~~lG~G~~g~Vy~~~~~~------~~~vavK~~~~~~~~~-----------~~~~~~E~~il~~l~h~nIv~~~~ 298 (557)
.|++.+.||+|+||.||+|.+.. ++.||+|++....... ...+..|+..+..++||||+++++
T Consensus 36 ~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~ 115 (364)
T 3op5_A 36 AWKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGVPKYWG 115 (364)
T ss_dssp EEEEEEECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTCHHHHHHHHHHHHHCCHHHHHHHHHHTTCSCCCSCCEEE
T ss_pred eEEEEEEEecCCCeEEEEeeecCccccccccceEEEEeeccchhHHHHHHHHHhhhhhHHHHHHHHHhhccCCCCCeEEe
Confidence 45567999999999999998764 4789999986543211 112445666777788999999999
Q ss_pred EEEec----CeeEEEEEecCCCChhhhhhccCCCCCcCHHHHHHHHHHHHHHHHHHHcCCCCCeEeeccCCCCEEeC--C
Q 008707 299 YCEEE----HQRILVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLD--I 372 (557)
Q Consensus 299 ~~~~~----~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~dlk~~NIll~--~ 372 (557)
++... ...++||||+ +++|.+++.. ....+++..++.++.||+.||+|||+ .+|+||||||+|||++ .
T Consensus 116 ~~~~~~~~~~~~~lv~e~~-g~~L~~~~~~--~~~~l~~~~~~~i~~qi~~~l~~lH~---~~iiHrDlkp~Nill~~~~ 189 (364)
T 3op5_A 116 SGLHDKNGKSYRFMIMDRF-GSDLQKIYEA--NAKRFSRKTVLQLSLRILDILEYIHE---HEYVHGDIKASNLLLNYKN 189 (364)
T ss_dssp EEEEEETTEEEEEEEEECE-EEEHHHHHHH--TTSCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEEESSC
T ss_pred eeeeccCCcceEEEEEeCC-CCCHHHHHHh--ccCCCCHHHHHHHHHHHHHHHHHHHH---CCeEEecCCHHHEEEecCC
Confidence 98764 4589999999 9999999975 34679999999999999999999999 9999999999999999 8
Q ss_pred CCcEEEecccCccccCCCCccc------cccccCCCCccCCcccCCCCCCcccceehhHHHHHHHHhCCCCCCCCCcccc
Q 008707 373 NMRAKVSDFGLSRQAEEDLTHI------SSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAE 446 (557)
Q Consensus 373 ~~~~kl~Dfgla~~~~~~~~~~------~~~~~g~~~y~aPE~l~~~~~s~~~DvwslG~ll~elltg~~pf~~~~~~~~ 446 (557)
++.+||+|||+++......... .....||+.|+|||.+.+..++.++|||||||++|||+||+.||......
T Consensus 190 ~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~Pf~~~~~~-- 267 (364)
T 3op5_A 190 PDQVYLVDYGLAYRYCPEGVHKAYAADPKRCHDGTIEFTSIDAHNGVAPSRRGDLEILGYCMIQWLTGHLPWEDNLKD-- 267 (364)
T ss_dssp TTCEEECCCTTCEESSGGGCCCCSSCCSSCCCCCCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGGTTC--
T ss_pred CCeEEEEECCcceecccCCcccccccCcccccCCCCCccCHHHhCCCCCCchhhHHHHHHHHHHHHhCCCCccccccC--
Confidence 8999999999998764432211 12344899999999999999999999999999999999999999843322
Q ss_pred ccHHHHHHHHHhcCCccccccccccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhhhhhc
Q 008707 447 LNIVHWARSMIKKGDVISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKIEK 515 (557)
Q Consensus 447 ~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~evl~~L~~~~~~~~ 515 (557)
............ ......+++.+... ..+..+.+++.+||+.+|++||++++|++.|+++.....
T Consensus 268 ~~~~~~~~~~~~-~~~~~~~~~~~~~~---~~~~~~~~li~~cl~~~p~~RP~~~~l~~~l~~~~~~~~ 332 (364)
T 3op5_A 268 PKYVRDSKIRYR-ENIASLMDKCFPAA---NAPGEIAKYMETVKLLDYTEKPLYENLRDILLQGLKAIG 332 (364)
T ss_dssp HHHHHHHHHHHH-HCHHHHHHHHSCTT---CCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHhh-hhHHHHHHHhcccc---cCHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHHcC
Confidence 112221221111 12222222222111 123478899999999999999999999999999987544
No 78
>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7
Probab=100.00 E-value=3.5e-41 Score=347.60 Aligned_cols=250 Identities=21% Similarity=0.344 Sum_probs=204.7
Q ss_pred HHHhhcccCCCCceEEEEEEEc-CCcEEEEEEccCccchhHHHHHHHHHHHhhcCCCCccceeeEEEecCeeEEEEEecC
Q 008707 236 TNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCSHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYEYMH 314 (557)
Q Consensus 236 ~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~lv~e~~~ 314 (557)
.|++.+.||+|+||.||+|... +|+.||+|++..........+.+|+++++.++||||+++++++.+.+..++||||++
T Consensus 52 ~y~i~~~LG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv~E~~~ 131 (387)
T 1kob_A 52 YYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLILEFLS 131 (387)
T ss_dssp TEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCSTTBCCEEEEEECSSEEEEEEECCC
T ss_pred ceEEEEEEecCCCEEEEEEEECCCCCEEEEEEecccchhhHHHHHHHHHHHHhCCCcCCCeEEEEEEeCCEEEEEEEcCC
Confidence 4566789999999999999876 688999999876655566788999999999999999999999999999999999999
Q ss_pred CCChhhhhhccCCCCCcCHHHHHHHHHHHHHHHHHHHcCCCCCeEeeccCCCCEEeCC--CCcEEEecccCccccCCCCc
Q 008707 315 NGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDI--NMRAKVSDFGLSRQAEEDLT 392 (557)
Q Consensus 315 ~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~dlk~~NIll~~--~~~~kl~Dfgla~~~~~~~~ 392 (557)
+|+|.+++.. ....+++..+..++.||+.||+|||+ .+|+||||||+|||++. ++.+||+|||++........
T Consensus 132 gg~L~~~l~~--~~~~l~~~~~~~i~~qi~~aL~~LH~---~givHrDlkp~NIll~~~~~~~vkL~DFG~a~~~~~~~~ 206 (387)
T 1kob_A 132 GGELFDRIAA--EDYKMSEAEVINYMRQACEGLKHMHE---HSIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEI 206 (387)
T ss_dssp CCBHHHHTTC--TTCCBCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEESSTTCCCEEECCCTTCEECCTTSC
T ss_pred CCcHHHHHHh--hcCCCCHHHHHHHHHHHHHHHHHHHh---CCeeecccchHHeEEecCCCCceEEEecccceecCCCcc
Confidence 9999999874 24568999999999999999999998 99999999999999974 47799999999987654322
Q ss_pred cccccccCCCCccCCcccCCCCCCcccceehhHHHHHHHHhCCCCCCCCCccccccHHHHHHHHHhcCCccccccccccC
Q 008707 393 HISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPVLIG 472 (557)
Q Consensus 393 ~~~~~~~g~~~y~aPE~l~~~~~s~~~DvwslG~ll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~ 472 (557)
.....||+.|+|||++.+..++.++|||||||++|+|++|..||...+.. +.... +..+... .++....
T Consensus 207 --~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~------~~~~~-i~~~~~~--~~~~~~~ 275 (387)
T 1kob_A 207 --VKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDL------ETLQN-VKRCDWE--FDEDAFS 275 (387)
T ss_dssp --EEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHH------HHHHH-HHHCCCC--CCSSTTT
T ss_pred --eeeeccCCCccCchhccCCCCCCcccEeeHhHHHHHHHhCCCCCCCCCHH------HHHHH-HHhCCCC--CCccccc
Confidence 22335899999999999999999999999999999999999999754321 11111 1111110 1111111
Q ss_pred CCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 008707 473 NVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 505 (557)
Q Consensus 473 ~~~~~~~~~l~~li~~cl~~~P~~RPt~~evl~ 505 (557)
..+..+.+++.+||+.||++|||+.|+++
T Consensus 276 ----~~s~~~~~li~~~L~~dP~~Rpt~~ell~ 304 (387)
T 1kob_A 276 ----SVSPEAKDFIKNLLQKEPRKRLTVHDALE 304 (387)
T ss_dssp ----TSCHHHHHHHHTTSCSSGGGSCCHHHHHT
T ss_pred ----cCCHHHHHHHHHHcCCChhHCcCHHHHhh
Confidence 22346889999999999999999999986
No 79
>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*
Probab=100.00 E-value=7.2e-42 Score=343.06 Aligned_cols=262 Identities=29% Similarity=0.449 Sum_probs=212.0
Q ss_pred HHHHhhcccCCCCceEEEEEEE------cCCcEEEEEEccCccc-hhHHHHHHHHHHHhhc-CCCCccceeeEEEecCee
Q 008707 235 ATNNFCKKIGKGSFGSVYYGKM------KDGKEVAVKIMADSCS-HRTQQFVTEVALLSRI-HHRNLVPLIGYCEEEHQR 306 (557)
Q Consensus 235 ~~~~~~~~lG~G~~g~Vy~~~~------~~~~~vavK~~~~~~~-~~~~~~~~E~~il~~l-~h~nIv~~~~~~~~~~~~ 306 (557)
..|++.+.||+|+||.||+|.+ .+++.||+|++..... ...+.+.+|+++++++ +||||+++++++.+.+..
T Consensus 23 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~ 102 (313)
T 1t46_A 23 NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPT 102 (313)
T ss_dssp GGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSC
T ss_pred hhhhHHHhhCccCCcceEEEEEeeccccchhhhhHHHhcCcchhHHHHHHHHHHHHHHhhcccCCCeeeEEEEEecCCCc
Confidence 4456789999999999999985 2467899999875433 3457799999999999 899999999999999999
Q ss_pred EEEEEecCCCChhhhhhccCC---------------CCCcCHHHHHHHHHHHHHHHHHHHcCCCCCeEeeccCCCCEEeC
Q 008707 307 ILVYEYMHNGTLRDRLHGSVN---------------QKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLD 371 (557)
Q Consensus 307 ~lv~e~~~~gsL~~~l~~~~~---------------~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~dlk~~NIll~ 371 (557)
++||||+++|+|.+++..... ...+++..++.++.|++.||+|||+ .+++||||||+||+++
T Consensus 103 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dlkp~Nil~~ 179 (313)
T 1t46_A 103 LVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLAS---KNCIHRDLAARNILLT 179 (313)
T ss_dssp EEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEEE
T ss_pred EEEEecCCCCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCccceEEEc
Confidence 999999999999999975421 2258999999999999999999998 9999999999999999
Q ss_pred CCCcEEEecccCccccCCCCcc-ccccccCCCCccCCcccCCCCCCcccceehhHHHHHHHHh-CCCCCCCCCccccccH
Q 008707 372 INMRAKVSDFGLSRQAEEDLTH-ISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELIS-GKKPVSVEDFGAELNI 449 (557)
Q Consensus 372 ~~~~~kl~Dfgla~~~~~~~~~-~~~~~~g~~~y~aPE~l~~~~~s~~~DvwslG~ll~ellt-g~~pf~~~~~~~~~~~ 449 (557)
.++.+||+|||++......... ......+++.|+|||.+.+..++.++||||||+++|+|+| |..||....... ..
T Consensus 180 ~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~--~~ 257 (313)
T 1t46_A 180 HGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDS--KF 257 (313)
T ss_dssp TTTEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCSSH--HH
T ss_pred CCCCEEEccccccccccccccceeccCCCCcceeeChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCCcccchh--HH
Confidence 9999999999999876544322 2233446789999999988899999999999999999999 999997543321 11
Q ss_pred HHHHHHHHhcCCccccccccccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhhhhh
Q 008707 450 VHWARSMIKKGDVISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKIE 514 (557)
Q Consensus 450 ~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~evl~~L~~~~~~~ 514 (557)
. ..+..+... ......+..+.+++.+||+.||.+|||+.||++.|+++....
T Consensus 258 ~----~~~~~~~~~---------~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~ 309 (313)
T 1t46_A 258 Y----KMIKEGFRM---------LSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQISES 309 (313)
T ss_dssp H----HHHHHTCCC---------CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHT
T ss_pred H----HHhccCCCC---------CCcccCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHHHh
Confidence 1 112221110 011122347889999999999999999999999999988753
No 80
>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.5e-40 Score=337.10 Aligned_cols=268 Identities=25% Similarity=0.373 Sum_probs=204.3
Q ss_pred HHHHHHHHhhcccCCCCceEEEEEEEcCCcEEEEEEccCccchhHHHHHHHHHHHhhc--CCCCccceeeEEEec----C
Q 008707 231 ELEEATNNFCKKIGKGSFGSVYYGKMKDGKEVAVKIMADSCSHRTQQFVTEVALLSRI--HHRNLVPLIGYCEEE----H 304 (557)
Q Consensus 231 ~~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~il~~l--~h~nIv~~~~~~~~~----~ 304 (557)
+.....|++.+.||+|+||.||+|.+. ++.||||++... ....+.+|.+++..+ +||||+++++++... .
T Consensus 33 ~~~~~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~---~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~ 108 (337)
T 3mdy_A 33 RTIAKQIQMVKQIGKGRYGEVWMGKWR-GEKVAVKVFFTT---EEASWFRETEIYQTVLMRHENILGFIAADIKGTGSWT 108 (337)
T ss_dssp TTHHHHCEEEEEEEEETTEEEEEEEET-TEEEEEEEEEGG---GHHHHHHHHHHHTSTTCCCTTBCCEEEEEEESCGGGC
T ss_pred cccccceEEEeEeecCCCeEEEEEEEC-CceEEEEEEecc---ccchhhhHHHHHHHHhhcCCCeeeEEEEEccCCCCCC
Confidence 444567788999999999999999987 899999998643 234455566666655 899999999999876 6
Q ss_pred eeEEEEEecCCCChhhhhhccCCCCCcCHHHHHHHHHHHHHHHHHHHcCCCC--------CeEeeccCCCCEEeCCCCcE
Q 008707 305 QRILVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNP--------GIIHRDVKSSNILLDINMRA 376 (557)
Q Consensus 305 ~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~--------~ivH~dlk~~NIll~~~~~~ 376 (557)
..++||||+++|+|.++++. ..+++..++.++.|++.||+|||+ . +++||||||+||+++.++.+
T Consensus 109 ~~~lv~e~~~~g~L~~~l~~----~~~~~~~~~~i~~~i~~~l~~lH~---~~~~~~~~~~ivH~Dikp~Nill~~~~~~ 181 (337)
T 3mdy_A 109 QLYLITDYHENGSLYDYLKS----TTLDAKSMLKLAYSSVSGLCHLHT---EIFSTQGKPAIAHRDLKSKNILVKKNGTC 181 (337)
T ss_dssp EEEEEECCCTTCBHHHHHHH----CCBCHHHHHHHHHHHHHHHHHHHS---CBCSTTCBCCEECSCCCGGGEEECTTSCE
T ss_pred ceEEEEeccCCCcHHHHhhc----cCCCHHHHHHHHHHHHHHHHHHHH---hhhhhccCCCEEecccchHHEEECCCCCE
Confidence 88999999999999999963 358999999999999999999998 6 99999999999999999999
Q ss_pred EEecccCccccCCCCccc---cccccCCCCccCCcccCCCCCCcc------cceehhHHHHHHHHhC----------CCC
Q 008707 377 KVSDFGLSRQAEEDLTHI---SSVARGTVGYLDPEYYGNQQLTEK------SDVYSFGVVLLELISG----------KKP 437 (557)
Q Consensus 377 kl~Dfgla~~~~~~~~~~---~~~~~g~~~y~aPE~l~~~~~s~~------~DvwslG~ll~elltg----------~~p 437 (557)
||+|||++.......... .....||+.|+|||.+.+...+.+ +|||||||++|||+|| +.|
T Consensus 182 kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~~~~~~~~~~~p 261 (337)
T 3mdy_A 182 CIADLGLAVKFISDTNEVDIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVARRCVSGGIVEEYQLP 261 (337)
T ss_dssp EECCCTTCEECC---------CCSSCSCGGGCCHHHHTTCCCTTCTHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCT
T ss_pred EEEeCCCceeeccccccccCCCCCCccCcceeChhhcccccCCccccCccccchHHHHHHHHHHHhccCccccccccccc
Confidence 999999997664432221 123468999999999988766655 9999999999999999 666
Q ss_pred CCCCCccccccHHHHHHHHHhcCCccccccccccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhhhhh
Q 008707 438 VSVEDFGAELNIVHWARSMIKKGDVISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKIE 514 (557)
Q Consensus 438 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~evl~~L~~~~~~~ 514 (557)
|....... ..... .............+... ......+..+.+++.+||+.||++|||++||++.|+++.+..
T Consensus 262 ~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~---~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l~~~~ 333 (337)
T 3mdy_A 262 YHDLVPSD-PSYED-MREIVCIKKLRPSFPNR---WSSDECLRQMGKLMTECWAHNPASRLTALRVKKTLAKMSESQ 333 (337)
T ss_dssp TTTTSCSS-CCHHH-HHHHHTTSCCCCCCCGG---GGGSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHTT
T ss_pred HhhhcCCC-Cchhh-hHHHHhhhccCcccccc---chhhHHHHHHHHHHHHhhhhChhhCCCHHHHHHHHHHHHhhc
Confidence 65322221 11111 12222111111111100 011256678999999999999999999999999999988754
No 81
>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*
Probab=100.00 E-value=7.4e-42 Score=339.07 Aligned_cols=254 Identities=24% Similarity=0.407 Sum_probs=201.9
Q ss_pred HHHHhhcccCCCCceEEEEEEEcC-C-------cEEEEEEccCccchhHHHHHHHHHHHhhcCCCCccceeeEEEecCee
Q 008707 235 ATNNFCKKIGKGSFGSVYYGKMKD-G-------KEVAVKIMADSCSHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQR 306 (557)
Q Consensus 235 ~~~~~~~~lG~G~~g~Vy~~~~~~-~-------~~vavK~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~ 306 (557)
..|.+.+.||+|+||.||+|.+.. + ..||+|++........+.+.+|+++++.++||||+++++++.+.+..
T Consensus 8 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 87 (289)
T 4fvq_A 8 EDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLVLNYGVCVCGDEN 87 (289)
T ss_dssp GGEEEEEEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGGGGGGHHHHHHHHHHHHTSCCTTBCCEEEEECCTTCC
T ss_pred hHeeeeeeeccCCCceEEEEEEecccccccccchhhhhhhcccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEeCCCC
Confidence 445678899999999999997653 3 57999998766666678899999999999999999999999999999
Q ss_pred EEEEEecCCCChhhhhhccCCCCCcCHHHHHHHHHHHHHHHHHHHcCCCCCeEeeccCCCCEEeCCCCc--------EEE
Q 008707 307 ILVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMR--------AKV 378 (557)
Q Consensus 307 ~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~dlk~~NIll~~~~~--------~kl 378 (557)
++||||+++|+|.+++... ...+++..++.++.||+.||+|||+ ++++||||||+|||++.++. +||
T Consensus 88 ~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~i~~qi~~~L~~LH~---~~ivH~Dlkp~NIll~~~~~~~~~~~~~~kl 162 (289)
T 4fvq_A 88 ILVQEFVKFGSLDTYLKKN--KNCINILWKLEVAKQLAAAMHFLEE---NTLIHGNVCAKNILLIREEDRKTGNPPFIKL 162 (289)
T ss_dssp EEEEECCTTCBHHHHHHHT--GGGCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEEEECCBGGGTBCCEEEE
T ss_pred EEEEECCCCCCHHHHHHhC--CCCCCHHHHHHHHHHHHHHHHHHhh---CCeECCCcCcceEEEecCCcccccccceeee
Confidence 9999999999999999753 3448999999999999999999998 99999999999999998877 999
Q ss_pred ecccCccccCCCCccccccccCCCCccCCcccCC-CCCCcccceehhHHHHHHHHhCCC-CCCCCCccccccHHHHHHHH
Q 008707 379 SDFGLSRQAEEDLTHISSVARGTVGYLDPEYYGN-QQLTEKSDVYSFGVVLLELISGKK-PVSVEDFGAELNIVHWARSM 456 (557)
Q Consensus 379 ~Dfgla~~~~~~~~~~~~~~~g~~~y~aPE~l~~-~~~s~~~DvwslG~ll~elltg~~-pf~~~~~~~~~~~~~~~~~~ 456 (557)
+|||++...... ....+++.|+|||.+.+ ..++.++||||||+++|||++|.. ||...+.. ......
T Consensus 163 ~Dfg~~~~~~~~-----~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~~------~~~~~~ 231 (289)
T 4fvq_A 163 SDPGISITVLPK-----DILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSALDSQ------RKLQFY 231 (289)
T ss_dssp CCCCSCTTTSCH-----HHHHHTTTTSCHHHHHCGGGCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHH------HHHHHH
T ss_pred ccCcccccccCc-----cccCCcCcccCHHHhCCCCCCCchhHHHHHHHHHHHHHcCCCCCccccchH------HHHHHh
Confidence 999998765432 12347889999999987 678999999999999999999554 44422111 111111
Q ss_pred HhcCCccccccccccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhhhhhcC
Q 008707 457 IKKGDVISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKIEKG 516 (557)
Q Consensus 457 ~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~evl~~L~~~~~~~~~ 516 (557)
......... .+..+.+++.+||+.||++|||++|+++.|+++......
T Consensus 232 ~~~~~~~~~------------~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~l~~p~~~ 279 (289)
T 4fvq_A 232 EDRHQLPAP------------KAAELANLINNCMDYEPDHRPSFRAIIRDLNSLFTPDLV 279 (289)
T ss_dssp HTTCCCCCC------------SSCTTHHHHHHHSCSSGGGSCCHHHHHHHHHTCC-----
T ss_pred hccCCCCCC------------CCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHhcCCCCC
Confidence 111111111 122577999999999999999999999999998875443
No 82
>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=8.7e-42 Score=347.43 Aligned_cols=266 Identities=26% Similarity=0.409 Sum_probs=208.2
Q ss_pred HHHHHHhhcccCCCCceEEEEEEEc------CCcEEEEEEccCcc-chhHHHHHHHHHHHhhc-CCCCccceeeEEEecC
Q 008707 233 EEATNNFCKKIGKGSFGSVYYGKMK------DGKEVAVKIMADSC-SHRTQQFVTEVALLSRI-HHRNLVPLIGYCEEEH 304 (557)
Q Consensus 233 ~~~~~~~~~~lG~G~~g~Vy~~~~~------~~~~vavK~~~~~~-~~~~~~~~~E~~il~~l-~h~nIv~~~~~~~~~~ 304 (557)
....|++.+.||+|+||.||+|.+. ++..||+|++.... ....+.+.+|+++++++ +||||+++++++...+
T Consensus 43 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~ 122 (344)
T 1rjb_A 43 PRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTLSG 122 (344)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEECSSS
T ss_pred CHHHceeeeeecCCCCceeEEeeeeccccCCcceEEEEEecccccCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEeeCC
Confidence 3455667899999999999999862 45689999987542 33456789999999999 8999999999999999
Q ss_pred eeEEEEEecCCCChhhhhhccCC--------------------CCCcCHHHHHHHHHHHHHHHHHHHcCCCCCeEeeccC
Q 008707 305 QRILVYEYMHNGTLRDRLHGSVN--------------------QKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVK 364 (557)
Q Consensus 305 ~~~lv~e~~~~gsL~~~l~~~~~--------------------~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~dlk 364 (557)
..++||||+++|+|.+++..... ...+++..++.++.||+.||+|||+ .||+|||||
T Consensus 123 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dik 199 (344)
T 1rjb_A 123 PIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEF---KSCVHRDLA 199 (344)
T ss_dssp SCEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHH---TTEEETTCS
T ss_pred ccEEEEecCCCCcHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCC
Confidence 99999999999999999975421 1347899999999999999999998 999999999
Q ss_pred CCCEEeCCCCcEEEecccCccccCCCCc-cccccccCCCCccCCcccCCCCCCcccceehhHHHHHHHHh-CCCCCCCCC
Q 008707 365 SSNILLDINMRAKVSDFGLSRQAEEDLT-HISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELIS-GKKPVSVED 442 (557)
Q Consensus 365 ~~NIll~~~~~~kl~Dfgla~~~~~~~~-~~~~~~~g~~~y~aPE~l~~~~~s~~~DvwslG~ll~ellt-g~~pf~~~~ 442 (557)
|+||+++.++.+||+|||++........ .......+|+.|+|||.+.+..++.++||||||+++|+|+| |..||....
T Consensus 200 p~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~ 279 (344)
T 1rjb_A 200 ARNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGIP 279 (344)
T ss_dssp GGGEEEETTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCC
T ss_pred hhhEEEcCCCcEEeCCCccCcccccCccceeccCccCccCccCHHHhccCCCChhHhHHHHHHHHHHHHcCCCCCcccCC
Confidence 9999999999999999999987644322 12233457889999999988899999999999999999998 999997543
Q ss_pred ccccccHHHHHHHHHhcCCccccccccccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhhhhhcC
Q 008707 443 FGAELNIVHWARSMIKKGDVISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKIEKG 516 (557)
Q Consensus 443 ~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~evl~~L~~~~~~~~~ 516 (557)
... . ....+..+... ..+...+..+.+++.+||+.||.+|||+.||++.|+.+......
T Consensus 280 ~~~--~----~~~~~~~~~~~---------~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~~~~ 338 (344)
T 1rjb_A 280 VDA--N----FYKLIQNGFKM---------DQPFYATEEIYIIMQSCWAFDSRKRPSFPNLTSFLGCQLADAEE 338 (344)
T ss_dssp CSH--H----HHHHHHTTCCC---------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC-----
T ss_pred cHH--H----HHHHHhcCCCC---------CCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHHHHHH
Confidence 321 1 11222222111 11112234788999999999999999999999999998775443
No 83
>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}
Probab=100.00 E-value=5.9e-42 Score=349.35 Aligned_cols=247 Identities=24% Similarity=0.354 Sum_probs=198.5
Q ss_pred HHHHhhcccCCCCceEEEEEEEc-CCcEEEEEEccCcc---chhHHHHHHHHHHHhhc-CCCCccceeeEEEecCeeEEE
Q 008707 235 ATNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSC---SHRTQQFVTEVALLSRI-HHRNLVPLIGYCEEEHQRILV 309 (557)
Q Consensus 235 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~il~~l-~h~nIv~~~~~~~~~~~~~lv 309 (557)
..|++.+.||+|+||.||+|..+ +++.||+|++.+.. ....+.+.+|.++++.+ +||||+++++++.+.+..++|
T Consensus 23 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~lv 102 (353)
T 3txo_A 23 DNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCCFQTPDRLFFV 102 (353)
T ss_dssp CCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHHTTHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEE
T ss_pred hheEEEEEEeeCCCEEEEEEEEcCCCCEEEEEEEEHHHhcchhHHHHHHHHHHHHHhccCCCceeeEEEEEEeCCEEEEE
Confidence 34566899999999999999876 58999999987532 23446688899999988 699999999999999999999
Q ss_pred EEecCCCChhhhhhccCCCCCcCHHHHHHHHHHHHHHHHHHHcCCCCCeEeeccCCCCEEeCCCCcEEEecccCccccCC
Q 008707 310 YEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEE 389 (557)
Q Consensus 310 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfgla~~~~~ 389 (557)
|||+++|+|.+++.. ...+++..+..++.||+.||+|||+ ++|+||||||+|||++.++.+||+|||+++....
T Consensus 103 ~E~~~gg~L~~~l~~---~~~~~~~~~~~~~~qi~~aL~~LH~---~givHrDlkp~NILl~~~g~ikL~DFG~a~~~~~ 176 (353)
T 3txo_A 103 MEFVNGGDLMFHIQK---SRRFDEARARFYAAEIISALMFLHD---KGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGIC 176 (353)
T ss_dssp EECCCSCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCCGGGEEECTTSCEEECCCTTCBCSCC
T ss_pred EeCCCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHH---CCCcccCCCHHHEEECCCCCEEEccccceeeccc
Confidence 999999999999974 3568999999999999999999998 9999999999999999999999999999986433
Q ss_pred CCccccccccCCCCccCCcccCCCCCCcccceehhHHHHHHHHhCCCCCCCCCccccccHHHHHHHHHhcCCcccccccc
Q 008707 390 DLTHISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPV 469 (557)
Q Consensus 390 ~~~~~~~~~~g~~~y~aPE~l~~~~~s~~~DvwslG~ll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 469 (557)
... ......||+.|+|||++.+..++.++|||||||++|||++|+.||...+... .. ..+..+...
T Consensus 177 ~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~------~~-~~i~~~~~~------ 242 (353)
T 3txo_A 177 NGV-TTATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAENEDD------LF-EAILNDEVV------ 242 (353)
T ss_dssp ----------CCGGGCCHHHHHHHHCTTHHHHHHHHHHHHHHHHSSCSSCCSSHHH------HH-HHHHHCCCC------
T ss_pred CCc-cccccCCCcCeEChhhcCCCCcCCccCCCcchHHHHHHHhCCCCCCCCCHHH------HH-HHHHcCCCC------
Confidence 222 2334569999999999998889999999999999999999999997543221 11 112222211
Q ss_pred ccCCCCHHHHHHHHHHHHHccccCCCCCCCH------HHHHH
Q 008707 470 LIGNVKIESIWRIAEVAIQCVEQRGFSRPKM------QEIVL 505 (557)
Q Consensus 470 l~~~~~~~~~~~l~~li~~cl~~~P~~RPt~------~evl~ 505 (557)
++......+.+++.+||+.||++||++ +||++
T Consensus 243 ----~p~~~~~~~~~li~~lL~~dP~~R~~~~~~~~~~~il~ 280 (353)
T 3txo_A 243 ----YPTWLHEDATGILKSFMTKNPTMRLGSLTQGGEHAILR 280 (353)
T ss_dssp ----CCTTSCHHHHHHHHHHTCSSGGGSTTSGGGTCTHHHHT
T ss_pred ----CCCCCCHHHHHHHHHHhhhCHHHccCCcccCCHHHHhh
Confidence 111123367899999999999999998 67765
No 84
>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*
Probab=100.00 E-value=2e-41 Score=334.65 Aligned_cols=258 Identities=28% Similarity=0.460 Sum_probs=205.2
Q ss_pred HHHhhcccCCCCceEEEEEEEcC----CcEEEEEEccCcc-chhHHHHHHHHHHHhhcCCCCccceeeEEEecCeeEEEE
Q 008707 236 TNNFCKKIGKGSFGSVYYGKMKD----GKEVAVKIMADSC-SHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVY 310 (557)
Q Consensus 236 ~~~~~~~lG~G~~g~Vy~~~~~~----~~~vavK~~~~~~-~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~lv~ 310 (557)
.|.+.+.||+|+||.||+|.+.. +..||+|.+.... ....+.+.+|+++++.++||||+++++++.++ ..++||
T Consensus 13 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~-~~~~v~ 91 (281)
T 3cc6_A 13 DVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIGIIEEE-PTWIIM 91 (281)
T ss_dssp GEEEEEEEEECSSSEEEEEEEECTTCCEEEEEEEECCTTSCHHHHHHHHHHHHHHHHHCCTTBCCEEEEECSS-SCEEEE
T ss_pred ceEEEEEEEecCCeeEEEeEEcCCCCCcceEEEEecccccCchHHHHHHHHHHHHHhCCCCCcceEEEEEcCC-CCEEEE
Confidence 45567899999999999998653 3369999987643 34567799999999999999999999998754 568999
Q ss_pred EecCCCChhhhhhccCCCCCcCHHHHHHHHHHHHHHHHHHHcCCCCCeEeeccCCCCEEeCCCCcEEEecccCccccCCC
Q 008707 311 EYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEED 390 (557)
Q Consensus 311 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfgla~~~~~~ 390 (557)
||+++++|.+++... ...+++..+..++.|++.||+|||+ .+++||||||+||+++.++.+||+|||++......
T Consensus 92 e~~~~~~L~~~l~~~--~~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 166 (281)
T 3cc6_A 92 ELYPYGELGHYLERN--KNSLKVLTLVLYSLQICKAMAYLES---INCVHRDIAVRNILVASPECVKLGDFGLSRYIEDE 166 (281)
T ss_dssp ECCTTCBHHHHHHHH--TTTCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCSGGGEEEEETTEEEECCCCGGGCC---
T ss_pred ecCCCCCHHHHHHhc--cccCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCccceEEECCCCcEEeCccCCCcccccc
Confidence 999999999999753 4568999999999999999999998 99999999999999999999999999999876554
Q ss_pred CccccccccCCCCccCCcccCCCCCCcccceehhHHHHHHHHh-CCCCCCCCCccccccHHHHHHHHHhcCCcccccccc
Q 008707 391 LTHISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELIS-GKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPV 469 (557)
Q Consensus 391 ~~~~~~~~~g~~~y~aPE~l~~~~~s~~~DvwslG~ll~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 469 (557)
.........+++.|+|||.+.+..++.++||||||+++|+|+| |+.||....... ... .+..+.....
T Consensus 167 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~llt~g~~p~~~~~~~~---~~~----~~~~~~~~~~---- 235 (281)
T 3cc6_A 167 DYYKASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKD---VIG----VLEKGDRLPK---- 235 (281)
T ss_dssp ------CCCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCGGG---HHH----HHHHTCCCCC----
T ss_pred cccccccCCCCcceeCchhhccCCCCchhccHHHHHHHHHHHhCCCCCcccCChHH---HHH----HHhcCCCCCC----
Confidence 3333334457889999999998899999999999999999998 999997443322 211 1222211111
Q ss_pred ccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhhhhhc
Q 008707 470 LIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKIEK 515 (557)
Q Consensus 470 l~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~evl~~L~~~~~~~~ 515 (557)
+...+..+.+++.+||+.+|++|||+.||++.|+++.+.+.
T Consensus 236 -----~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~~~~~~~ 276 (281)
T 3cc6_A 236 -----PDLCPPVLYTLMTRCWDYDPSDRPRFTELVCSLSDVYQMEK 276 (281)
T ss_dssp -----CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHH
T ss_pred -----CCCCCHHHHHHHHHHccCCchhCcCHHHHHHHHHHHHHhhh
Confidence 11123468899999999999999999999999999987654
No 85
>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0
Probab=100.00 E-value=4.2e-41 Score=330.42 Aligned_cols=249 Identities=31% Similarity=0.425 Sum_probs=192.3
Q ss_pred HHHhhcccCCCCceEEEEEEEcCCcEEEEEEccCccc----hhHHHHHHHHHHHhhcCCCCccceeeEEEecCeeEEEEE
Q 008707 236 TNNFCKKIGKGSFGSVYYGKMKDGKEVAVKIMADSCS----HRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYE 311 (557)
Q Consensus 236 ~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~----~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~lv~e 311 (557)
.|++.+.||+|+||.||+|.+. ++.||+|++..... ...+.+.+|+++++.++||||+++++++.+.+..++|||
T Consensus 8 ~~~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 86 (271)
T 3dtc_A 8 ELTLEEIIGIGGFGKVYRAFWI-GDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLKEPNLCLVME 86 (271)
T ss_dssp SEEEEEEEEEETTEEEEEEEET-TEEEEEEEC----------CHHHHHHHHHHHHHCCCTTBCCEEEEECCC--CEEEEE
T ss_pred heeeeeeeccCCCeEEEEEEEc-CCeEEEEEEecCCcccHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCCceEEEEE
Confidence 3456789999999999999986 89999999865322 224678899999999999999999999999999999999
Q ss_pred ecCCCChhhhhhccCCCCCcCHHHHHHHHHHHHHHHHHHHcCCCCC---eEeeccCCCCEEeCC--------CCcEEEec
Q 008707 312 YMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPG---IIHRDVKSSNILLDI--------NMRAKVSD 380 (557)
Q Consensus 312 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~---ivH~dlk~~NIll~~--------~~~~kl~D 380 (557)
|+++++|.+++. ...+++..++.++.|++.||+|||+ .+ ++||||||+||+++. ++.+||+|
T Consensus 87 ~~~~~~L~~~~~----~~~~~~~~~~~i~~~l~~~l~~lH~---~~~~~i~H~dikp~Nil~~~~~~~~~~~~~~~kl~D 159 (271)
T 3dtc_A 87 FARGGPLNRVLS----GKRIPPDILVNWAVQIARGMNYLHD---EAIVPIIHRDLKSSNILILQKVENGDLSNKILKITD 159 (271)
T ss_dssp CCTTEEHHHHHT----SSCCCHHHHHHHHHHHHHHHHHHHH---SSSSCCCCSCCSGGGEEESSCCSSSCCSSCCEEECC
T ss_pred cCCCCCHHHHhh----cCCCCHHHHHHHHHHHHHHHHHHHh---CCCCceeecCCchHHEEEecccccccccCcceEEcc
Confidence 999999999985 4568999999999999999999998 77 999999999999986 67899999
Q ss_pred ccCccccCCCCccccccccCCCCccCCcccCCCCCCcccceehhHHHHHHHHhCCCCCCCCCccccccHHHHHHHHHhcC
Q 008707 381 FGLSRQAEEDLTHISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKG 460 (557)
Q Consensus 381 fgla~~~~~~~~~~~~~~~g~~~y~aPE~l~~~~~s~~~DvwslG~ll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~ 460 (557)
||++........ ....|++.|+|||.+.+..++.++||||||+++|+|++|+.||...+... ...... .+
T Consensus 160 fg~~~~~~~~~~---~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~------~~~~~~-~~ 229 (271)
T 3dtc_A 160 FGLAREWHRTTK---MSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGIDGLA------VAYGVA-MN 229 (271)
T ss_dssp CCC----------------CCGGGSCHHHHHHCCCSHHHHHHHHHHHHHHHHHCCCTTTTSCHHH------HHHHHH-TS
T ss_pred CCcccccccccc---cCCCCccceeCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH------HHHhhh-cC
Confidence 999986644322 23358999999999998899999999999999999999999997433211 111111 11
Q ss_pred CccccccccccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhh
Q 008707 461 DVISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDS 510 (557)
Q Consensus 461 ~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~evl~~L~~~ 510 (557)
... ...+...+..+.+++.+||+.+|++|||++|+++.|+++
T Consensus 230 ~~~--------~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~L~~l 271 (271)
T 3dtc_A 230 KLA--------LPIPSTCPEPFAKLMEDCWNPDPHSRPSFTNILDQLTTI 271 (271)
T ss_dssp CCC--------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHC-
T ss_pred CCC--------CCCCcccCHHHHHHHHHHhcCCcccCcCHHHHHHHHhcC
Confidence 111 011112234788999999999999999999999999864
No 86
>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}
Probab=100.00 E-value=5e-41 Score=345.48 Aligned_cols=248 Identities=24% Similarity=0.348 Sum_probs=201.5
Q ss_pred HHHhhcccCCCCceEEEEEEEc-CCcEEEEEEccCcc---chhHHHHHHHHHHHhhcCCCCccceeeEEEecCeeEEEEE
Q 008707 236 TNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSC---SHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYE 311 (557)
Q Consensus 236 ~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~lv~e 311 (557)
.|++.+.||+|+||.||+|... +++.||+|++.... ....+.+.+|+++++.++||||+++++++.+.+..++|||
T Consensus 16 ~y~i~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lv~e 95 (384)
T 4fr4_A 16 HFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWYSFQDEEDMFMVVD 95 (384)
T ss_dssp GEEEEEEEECCTTCCEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred HeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehhhcccHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEEEe
Confidence 4566799999999999999876 58899999986432 2334678899999999999999999999999999999999
Q ss_pred ecCCCChhhhhhccCCCCCcCHHHHHHHHHHHHHHHHHHHcCCCCCeEeeccCCCCEEeCCCCcEEEecccCccccCCCC
Q 008707 312 YMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEEDL 391 (557)
Q Consensus 312 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfgla~~~~~~~ 391 (557)
|+.+|+|.+++.. ...+++..+..++.||+.||+|||+ .||+||||||+|||++.++.+||+|||++.......
T Consensus 96 ~~~gg~L~~~l~~---~~~l~~~~~~~~~~qi~~aL~~LH~---~givHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~ 169 (384)
T 4fr4_A 96 LLLGGDLRYHLQQ---NVHFKEETVKLFICELVMALDYLQN---QRIIHRDMKPDNILLDEHGHVHITDFNIAAMLPRET 169 (384)
T ss_dssp CCTTEEHHHHHHT---TCCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTSCEEECCCTTCEECCTTC
T ss_pred cCCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHH---CCceeccCcHHHeEECCCCCEEEeccceeeeccCCC
Confidence 9999999999973 5679999999999999999999998 999999999999999999999999999998765432
Q ss_pred ccccccccCCCCccCCcccCC---CCCCcccceehhHHHHHHHHhCCCCCCCCCccccccHHHHHHHHHhcCCccccccc
Q 008707 392 THISSVARGTVGYLDPEYYGN---QQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDP 468 (557)
Q Consensus 392 ~~~~~~~~g~~~y~aPE~l~~---~~~s~~~DvwslG~ll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 468 (557)
......||+.|+|||++.+ ..++.++|||||||++|||++|+.||............. . +.....
T Consensus 170 --~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~~~~~~---~-~~~~~~------ 237 (384)
T 4fr4_A 170 --QITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTSSKEIVH---T-FETTVV------ 237 (384)
T ss_dssp --CBCCCCSCGGGCCGGGTCCCSSCCBCTTHHHHHHHHHHHHHHHSSCSSCCCTTSCHHHHHH---H-HHHCCC------
T ss_pred --ceeccCCCccccCCeeeccCCCCCCCccceeechHHHHHHHHhCCCCCCCCCCccHHHHHH---H-Hhhccc------
Confidence 2234569999999999964 458999999999999999999999997544332222211 1 111111
Q ss_pred cccCCCCHHHHHHHHHHHHHccccCCCCCCC-HHHHHH
Q 008707 469 VLIGNVKIESIWRIAEVAIQCVEQRGFSRPK-MQEIVL 505 (557)
Q Consensus 469 ~l~~~~~~~~~~~l~~li~~cl~~~P~~RPt-~~evl~ 505 (557)
.++......+.+++.+||+.||.+||+ +++|++
T Consensus 238 ----~~p~~~s~~~~~li~~lL~~dP~~R~s~~~~l~~ 271 (384)
T 4fr4_A 238 ----TYPSAWSQEMVSLLKKLLEPNPDQRFSQLSDVQN 271 (384)
T ss_dssp ----CCCTTSCHHHHHHHHHHSCSSGGGSCCSHHHHHT
T ss_pred ----CCCCcCCHHHHHHHHHHhcCCHhHhcccHHHHHc
Confidence 111122347889999999999999998 777654
No 87
>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*
Probab=100.00 E-value=7.3e-41 Score=346.61 Aligned_cols=270 Identities=19% Similarity=0.269 Sum_probs=203.0
Q ss_pred HHHhhcccCCC--CceEEEEEEEc-CCcEEEEEEccCcc--chhHHHHHHHHHHHhhcCCCCccceeeEEEecCeeEEEE
Q 008707 236 TNNFCKKIGKG--SFGSVYYGKMK-DGKEVAVKIMADSC--SHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVY 310 (557)
Q Consensus 236 ~~~~~~~lG~G--~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~lv~ 310 (557)
.|++.+.||+| +||.||+|... +++.||||++.... ....+.+.+|+++++.++||||+++++++.+.+..++||
T Consensus 26 ~y~~~~~lG~G~~~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 105 (389)
T 3gni_B 26 CYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVVT 105 (389)
T ss_dssp GEEEEEEEEEETTTTEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred cEEEEecccCCcCCceEEEEEEEcCCCCEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCCCcEeEEEEECCEEEEEE
Confidence 35567999999 99999999886 68999999986542 334567888999999999999999999999999999999
Q ss_pred EecCCCChhhhhhccCCCCCcCHHHHHHHHHHHHHHHHHHHcCCCCCeEeeccCCCCEEeCCCCcEEEecccCccccCCC
Q 008707 311 EYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEED 390 (557)
Q Consensus 311 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfgla~~~~~~ 390 (557)
||+++|+|.+++... ....+++..+..++.||+.||+|||+ .+|+||||||+|||++.++.+||+|||.+......
T Consensus 106 e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~~qi~~~l~~LH~---~~ivHrDlkp~NIll~~~~~~kl~dfg~~~~~~~~ 181 (389)
T 3gni_B 106 SFMAYGSAKDLICTH-FMDGMNELAIAYILQGVLKALDYIHH---MGYVHRSVKASHILISVDGKVYLSGLRSNLSMISH 181 (389)
T ss_dssp ECCTTCBHHHHHHHT-CTTCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTCCEEECCGGGCEECEET
T ss_pred EccCCCCHHHHHhhh-cccCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEEcCCCCEEEcccccceeeccc
Confidence 999999999999754 23568999999999999999999998 99999999999999999999999999988654222
Q ss_pred Cc------cccccccCCCCccCCcccCC--CCCCcccceehhHHHHHHHHhCCCCCCCCCccccccHHHHHHHHHh----
Q 008707 391 LT------HISSVARGTVGYLDPEYYGN--QQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIK---- 458 (557)
Q Consensus 391 ~~------~~~~~~~g~~~y~aPE~l~~--~~~s~~~DvwslG~ll~elltg~~pf~~~~~~~~~~~~~~~~~~~~---- 458 (557)
.. .......||+.|+|||++.+ ..++.++|||||||++|||++|+.||...+.... +.........
T Consensus 182 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~--~~~~~~~~~~~~~~ 259 (389)
T 3gni_B 182 GQRQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQM--LLEKLNGTVPCLLD 259 (389)
T ss_dssp TEECSCBCCCCTTCTTTGGGSCHHHHSTTSSCBCTHHHHHHHHHHHHHHHHSSCTTTTCCSTTH--HHHC----------
T ss_pred cccccccccccccccccccccCHHHHhccCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCHHHH--HHHHhcCCCCcccc
Confidence 11 11122358899999999987 6789999999999999999999999975443211 1110000000
Q ss_pred c------------------CCccccc---ccc------ccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHH--HHh
Q 008707 459 K------------------GDVISIV---DPV------LIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLA--IQD 509 (557)
Q Consensus 459 ~------------------~~~~~~~---d~~------l~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~evl~~--L~~ 509 (557)
. ....... .+. ............+.+++.+||+.||++|||++|+++. +++
T Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpta~ell~hp~f~~ 339 (389)
T 3gni_B 260 TSTIPAEELTMSPSRSVANSGLSDSLTTSTPRPSNGDSPSHPYHRTFSPHFHHFVEQCLQRNPDARPSASTLLNHSFFKQ 339 (389)
T ss_dssp ----------------------------------------------CCHHHHHHHHHHTCSCTTTSCCHHHHTTSGGGGG
T ss_pred ccccccccccccccccccccccccccccCccccccCCCCCCccccccCHHHHHHHHHHhhcCcccCCCHHHHhcCHHHHH
Confidence 0 0000000 000 0000111223468899999999999999999999864 444
Q ss_pred hh
Q 008707 510 SI 511 (557)
Q Consensus 510 ~~ 511 (557)
+.
T Consensus 340 ~~ 341 (389)
T 3gni_B 340 IK 341 (389)
T ss_dssp C-
T ss_pred Hh
Confidence 43
No 88
>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...
Probab=100.00 E-value=1.9e-41 Score=342.60 Aligned_cols=257 Identities=23% Similarity=0.413 Sum_probs=201.6
Q ss_pred HHHHhhcccCCCCceEEEEEEEc-CCc----EEEEEEccCcc-chhHHHHHHHHHHHhhcCCCCccceeeEEEecCeeEE
Q 008707 235 ATNNFCKKIGKGSFGSVYYGKMK-DGK----EVAVKIMADSC-SHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRIL 308 (557)
Q Consensus 235 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~----~vavK~~~~~~-~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~l 308 (557)
..|++.+.||+|+||.||+|.+. +++ .||+|.+.... ....+.+.+|++++++++||||+++++++.+.. .++
T Consensus 15 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-~~~ 93 (327)
T 3poz_A 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQL 93 (327)
T ss_dssp GGEEEEEEEEEETTEEEEEEEECC----CCEEEEEEEC-------CHHHHHHHHHHHHHCCBTTBCCEEEEEESSS-EEE
T ss_pred HHcccceEEeeCCCeEEEEEEEcCCCceEEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCC-eEE
Confidence 44566799999999999999865 344 36888875432 344577999999999999999999999998754 789
Q ss_pred EEEecCCCChhhhhhccCCCCCcCHHHHHHHHHHHHHHHHHHHcCCCCCeEeeccCCCCEEeCCCCcEEEecccCccccC
Q 008707 309 VYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAE 388 (557)
Q Consensus 309 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfgla~~~~ 388 (557)
|+|++.+|+|.+++... ...+++..++.++.||+.||+|||+ .+|+||||||+|||++.++.+||+|||+++...
T Consensus 94 v~e~~~~g~L~~~l~~~--~~~~~~~~~~~~~~qi~~~l~~LH~---~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~ 168 (327)
T 3poz_A 94 ITQLMPFGCLLDYVREH--KDNIGSQYLLNWCVQIAKGMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLG 168 (327)
T ss_dssp EEECCTTCBHHHHHHHS--TTSCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEEEETTEEEECCTTHHHHHT
T ss_pred EEEecCCCcHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHhh---CCeeCCCCChheEEECCCCCEEEccCcceeEcc
Confidence 99999999999999753 4568999999999999999999998 999999999999999999999999999998764
Q ss_pred CCCcc-ccccccCCCCccCCcccCCCCCCcccceehhHHHHHHHHh-CCCCCCCCCccccccHHHHHHHHHhcCCccccc
Q 008707 389 EDLTH-ISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELIS-GKKPVSVEDFGAELNIVHWARSMIKKGDVISIV 466 (557)
Q Consensus 389 ~~~~~-~~~~~~g~~~y~aPE~l~~~~~s~~~DvwslG~ll~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 466 (557)
..... ......+|+.|+|||.+.+..++.++||||||+++|||+| |+.||....... +. ..+..+....
T Consensus 169 ~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~---~~----~~~~~~~~~~-- 239 (327)
T 3poz_A 169 AEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE---IS----SILEKGERLP-- 239 (327)
T ss_dssp TTCC-------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGG---HH----HHHHTTCCCC--
T ss_pred CCcccccccCCCccccccChHHhccCCCCchhhhhhhHHHHHHHHhcCCCCccCCCHHH---HH----HHHHcCCCCC--
Confidence 43222 2223346889999999999999999999999999999999 999998544322 11 1222222111
Q ss_pred cccccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhhhh
Q 008707 467 DPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKI 513 (557)
Q Consensus 467 d~~l~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~evl~~L~~~~~~ 513 (557)
.+...+..+.+++.+||+.+|++|||++||++.|+.+...
T Consensus 240 -------~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~l~~~~~~ 279 (327)
T 3poz_A 240 -------QPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARD 279 (327)
T ss_dssp -------CCTTBCHHHHHHHHHHTCSCGGGSCCHHHHHHHHHHHHTS
T ss_pred -------CCccCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHhh
Confidence 1112234788999999999999999999999999988763
No 89
>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}
Probab=100.00 E-value=9.4e-42 Score=345.27 Aligned_cols=244 Identities=24% Similarity=0.330 Sum_probs=199.1
Q ss_pred HHhhcccCCCCceEEEEEEE-cCCcEEEEEEccCcc---chhHHHHHHHHHHHhhcCCCCccceeeEEEecCeeEEEEEe
Q 008707 237 NNFCKKIGKGSFGSVYYGKM-KDGKEVAVKIMADSC---SHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYEY 312 (557)
Q Consensus 237 ~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~lv~e~ 312 (557)
|.+.+.||+|+||.||+|.+ .+++.||+|++.... ....+.+.+|+++++.++||||+++++++.+.+..++||||
T Consensus 11 Y~i~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~E~ 90 (336)
T 3h4j_B 11 YIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYDVITTPTDIVMVIEY 90 (336)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCSHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEECC
T ss_pred EEEEEEEecCCCeEEEEEEECCCCCEEEEEEEehHHccchhHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEEEC
Confidence 45678999999999999987 468999999986432 12235788999999999999999999999999999999999
Q ss_pred cCCCChhhhhhccCCCCCcCHHHHHHHHHHHHHHHHHHHcCCCCCeEeeccCCCCEEeCCCCcEEEecccCccccCCCCc
Q 008707 313 MHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEEDLT 392 (557)
Q Consensus 313 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfgla~~~~~~~~ 392 (557)
+ +|+|.+++.. ...+++..+..++.|++.||+|||+ .||+||||||+||+++.++.+||+|||++........
T Consensus 91 ~-~g~l~~~l~~---~~~l~~~~~~~i~~qi~~aL~~LH~---~givH~Dlkp~NIll~~~~~~kl~DFG~s~~~~~~~~ 163 (336)
T 3h4j_B 91 A-GGELFDYIVE---KKRMTEDEGRRFFQQIICAIEYCHR---HKIVHRDLKPENLLLDDNLNVKIADFGLSNIMTDGNF 163 (336)
T ss_dssp C-CEEHHHHHHH---HCSCCHHHHHHHHHHHHHHHHHHHH---HTCCCCCCSTTTEEECTTCCEEECCSSCTBTTTTSBT
T ss_pred C-CCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHH---CCeEecCCchhhEEEcCCCCEEEEEeccceeccCCcc
Confidence 9 7899998874 3568999999999999999999998 9999999999999999999999999999987654322
Q ss_pred cccccccCCCCccCCcccCCCCC-CcccceehhHHHHHHHHhCCCCCCCCCccccccHHHHHHHHHhcCCcccccccccc
Q 008707 393 HISSVARGTVGYLDPEYYGNQQL-TEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPVLI 471 (557)
Q Consensus 393 ~~~~~~~g~~~y~aPE~l~~~~~-s~~~DvwslG~ll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~ 471 (557)
.....||+.|+|||.+.+..+ +.++||||||+++|+|++|+.||........... +..+ .
T Consensus 164 --~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~~~~~-------i~~~----------~ 224 (336)
T 3h4j_B 164 --LKTSCGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEFIPNLFKK-------VNSC----------V 224 (336)
T ss_dssp --TCCCTTSTTTSCGGGSCCSGGGCHHHHHHHHHHHHHHHHHSSCSSBCSSSTTCBCC-------CCSS----------C
T ss_pred --cccccCCcCcCCHHHHcCCCCCCCccchhHHHHHHHHHHhCCCCCCCccHHHHHHH-------HHcC----------C
Confidence 233468999999999988776 6899999999999999999999985433221100 0000 0
Q ss_pred CCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 008707 472 GNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLA 506 (557)
Q Consensus 472 ~~~~~~~~~~l~~li~~cl~~~P~~RPt~~evl~~ 506 (557)
...+...+..+.+++.+||+.||.+|||++|+++.
T Consensus 225 ~~~p~~~s~~~~~li~~~L~~dP~~Rpt~~eil~h 259 (336)
T 3h4j_B 225 YVMPDFLSPGAQSLIRRMIVADPMQRITIQEIRRD 259 (336)
T ss_dssp CCCCTTSCHHHHHHHHTTSCSSGGGSCCHHHHTTC
T ss_pred CCCcccCCHHHHHHHHHHcCCChhHCcCHHHHHhC
Confidence 01111223468899999999999999999999864
No 90
>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=9.3e-41 Score=331.02 Aligned_cols=255 Identities=25% Similarity=0.417 Sum_probs=208.4
Q ss_pred cccCCCCceEEEEEEEc---CCcEEEEEEccCcc-chhHHHHHHHHHHHhhcCCCCccceeeEEEecCeeEEEEEecCCC
Q 008707 241 KKIGKGSFGSVYYGKMK---DGKEVAVKIMADSC-SHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYEYMHNG 316 (557)
Q Consensus 241 ~~lG~G~~g~Vy~~~~~---~~~~vavK~~~~~~-~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~lv~e~~~~g 316 (557)
+.||+|+||.||+|.+. ++..||+|++.... ....+.+.+|+++++.++||||+++++++ ..+..++||||++++
T Consensus 16 ~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~-~~~~~~lv~e~~~~~ 94 (287)
T 1u59_A 16 IELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVC-QAEALMLVMEMAGGG 94 (287)
T ss_dssp EEEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEE-ESSSEEEEEECCTTE
T ss_pred ccccccCceeEEEeEeccCCCcceEEEEecCCccchhHHHHHHHHHHHHHhCCCCCEeEEEEEe-cCCCcEEEEEeCCCC
Confidence 48999999999999764 57889999997643 34567799999999999999999999999 456689999999999
Q ss_pred ChhhhhhccCCCCCcCHHHHHHHHHHHHHHHHHHHcCCCCCeEeeccCCCCEEeCCCCcEEEecccCccccCCCCcc--c
Q 008707 317 TLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEEDLTH--I 394 (557)
Q Consensus 317 sL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfgla~~~~~~~~~--~ 394 (557)
+|.+++.. ....+++..++.++.|++.||+|||+ .+++||||||+||+++.++.+||+|||++......... .
T Consensus 95 ~L~~~l~~--~~~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~ 169 (287)
T 1u59_A 95 PLHKFLVG--KREEIPVSNVAELLHQVSMGMKYLEE---KNFVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYTA 169 (287)
T ss_dssp EHHHHHTT--CTTTSCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEEEETTEEEECCCTTCEECTTCSCEECC
T ss_pred CHHHHHHh--CCccCCHHHHHHHHHHHHHHHHHHHH---CCEeeCCCchheEEEcCCCCEEECcccceeeeccCcceeec
Confidence 99999864 34568999999999999999999998 99999999999999999999999999999876543322 1
Q ss_pred cccccCCCCccCCcccCCCCCCcccceehhHHHHHHHHh-CCCCCCCCCccccccHHHHHHHHHhcCCccccccccccCC
Q 008707 395 SSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELIS-GKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPVLIGN 473 (557)
Q Consensus 395 ~~~~~g~~~y~aPE~l~~~~~s~~~DvwslG~ll~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~ 473 (557)
.....+|+.|+|||.+.+..++.++||||||+++|+|+| |+.||....... . ...+..+....
T Consensus 170 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~---~----~~~i~~~~~~~--------- 233 (287)
T 1u59_A 170 RSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPE---V----MAFIEQGKRME--------- 233 (287)
T ss_dssp CCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCTHH---H----HHHHHTTCCCC---------
T ss_pred cccccccccccCHHHhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCHHH---H----HHHHhcCCcCC---------
Confidence 223346889999999988889999999999999999999 999997443211 1 12222222111
Q ss_pred CCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhhhhhcCC
Q 008707 474 VKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKIEKGG 517 (557)
Q Consensus 474 ~~~~~~~~l~~li~~cl~~~P~~RPt~~evl~~L~~~~~~~~~~ 517 (557)
.+...+..+.+++.+||+.+|++||++.||++.|+.+.......
T Consensus 234 ~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~~~~~ 277 (287)
T 1u59_A 234 CPPECPPELYALMSDCWIYKWEDRPDFLTVEQRMRACYYSLASK 277 (287)
T ss_dssp CCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHHHHTT
T ss_pred CCCCcCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhcCCc
Confidence 11223347889999999999999999999999999998876554
No 91
>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7
Probab=100.00 E-value=4.3e-41 Score=338.21 Aligned_cols=242 Identities=22% Similarity=0.360 Sum_probs=201.1
Q ss_pred HHhhcccCCCCceEEEEEEEc-CCcEEEEEEccCcc---chhHHHHHHHHHHHhhcCCCCccceeeEEEecCeeEEEEEe
Q 008707 237 NNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSC---SHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYEY 312 (557)
Q Consensus 237 ~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~lv~e~ 312 (557)
|++.+.||+|+||.||+|... +|+.||+|++.... ....+.+.+|..+++.++||||+++++++.+.+..++||||
T Consensus 8 y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lv~e~ 87 (318)
T 1fot_A 8 FQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFMIMDY 87 (318)
T ss_dssp EEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSSEEEEEECC
T ss_pred cEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhhCCCCCCceEeEEEEeCCEEEEEEeC
Confidence 456789999999999999876 68999999986532 12346788899999999999999999999999999999999
Q ss_pred cCCCChhhhhhccCCCCCcCHHHHHHHHHHHHHHHHHHHcCCCCCeEeeccCCCCEEeCCCCcEEEecccCccccCCCCc
Q 008707 313 MHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEEDLT 392 (557)
Q Consensus 313 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfgla~~~~~~~~ 392 (557)
+++|+|.+++.. ...+++..+..++.||+.||+|||+ ++|+||||||+|||++.++.+||+|||++......
T Consensus 88 ~~gg~L~~~l~~---~~~~~~~~~~~~~~qi~~aL~~LH~---~~ivHrDlkp~NIll~~~g~~kL~Dfg~a~~~~~~-- 159 (318)
T 1fot_A 88 IEGGELFSLLRK---SQRFPNPVAKFYAAEVCLALEYLHS---KDIIYRDLKPENILLDKNGHIKITDFGFAKYVPDV-- 159 (318)
T ss_dssp CCSCBHHHHHHH---TSSCCHHHHHHHHHHHHHHHHHHHT---TTEECCCCCGGGEEECTTSCEEECCCSSCEECSSC--
T ss_pred CCCCCHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHH---CCccccCCChheEEEcCCCCEEEeecCcceecCCc--
Confidence 999999999974 4568999999999999999999998 99999999999999999999999999999876432
Q ss_pred cccccccCCCCccCCcccCCCCCCcccceehhHHHHHHHHhCCCCCCCCCccccccHHHHHHHHHhcCCccccccccccC
Q 008707 393 HISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPVLIG 472 (557)
Q Consensus 393 ~~~~~~~g~~~y~aPE~l~~~~~s~~~DvwslG~ll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~ 472 (557)
.....||+.|+|||++.+..++.++|||||||++|||++|+.||...+.. ........ +.. .+
T Consensus 160 --~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~------~~~~~i~~-~~~------~~-- 222 (318)
T 1fot_A 160 --TYTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTM------KTYEKILN-AEL------RF-- 222 (318)
T ss_dssp --BCCCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHH------HHHHHHHH-CCC------CC--
T ss_pred --cccccCCccccCHhHhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHH------HHHHHHHh-CCC------CC--
Confidence 23356899999999999999999999999999999999999999743321 11122221 211 01
Q ss_pred CCCHHHHHHHHHHHHHccccCCCCCC-----CHHHHHH
Q 008707 473 NVKIESIWRIAEVAIQCVEQRGFSRP-----KMQEIVL 505 (557)
Q Consensus 473 ~~~~~~~~~l~~li~~cl~~~P~~RP-----t~~evl~ 505 (557)
+......+.+++.+|+..||++|| +++||++
T Consensus 223 --p~~~~~~~~~li~~lL~~dp~~R~~~~~~~~~~i~~ 258 (318)
T 1fot_A 223 --PPFFNEDVKDLLSRLITRDLSQRLGNLQNGTEDVKN 258 (318)
T ss_dssp --CTTSCHHHHHHHHHHTCSCTTTCTTSSTTTTHHHHT
T ss_pred --CCCCCHHHHHHHHHHhccCHHHcCCCcCCCHHHHhc
Confidence 111223688999999999999999 8899875
No 92
>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*
Probab=100.00 E-value=6e-41 Score=328.93 Aligned_cols=251 Identities=21% Similarity=0.364 Sum_probs=203.4
Q ss_pred HHHhhcccCCCCceEEEEEEEcCCcEEEEEEccCcc--chhHHHHHHHHHHHhhcCCCCccceeeEEEec--CeeEEEEE
Q 008707 236 TNNFCKKIGKGSFGSVYYGKMKDGKEVAVKIMADSC--SHRTQQFVTEVALLSRIHHRNLVPLIGYCEEE--HQRILVYE 311 (557)
Q Consensus 236 ~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~--~~~~lv~e 311 (557)
.|++.+.||+|+||.||+|.++ ++.||+|++.... ....+.+.+|+.+++.++||||+++++++.+. +..++|||
T Consensus 11 ~y~~~~~lg~G~~g~V~~~~~~-~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e 89 (271)
T 3kmu_A 11 QLNFLTKLNENHSGELWKGRWQ-GNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTLITH 89 (271)
T ss_dssp GCEEEEEEEEETTEEEEEEEET-TEEEEEEEECCTTCCHHHHHHHHHHGGGGCCCSCTTEECEEEEECTTTSSSCEEEEE
T ss_pred HhHHHHHhcCCCcceEEEEEEC-CeeEEEEEecccccCHHHHHHHHHHHHHHHhcCCCchhheEEEEccCCCCCeEeeec
Confidence 4556789999999999999986 8999999987542 34456799999999999999999999999876 77899999
Q ss_pred ecCCCChhhhhhccCCCCCcCHHHHHHHHHHHHHHHHHHHcCCCCC--eEeeccCCCCEEeCCCCcEEEecccCccccCC
Q 008707 312 YMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPG--IIHRDVKSSNILLDINMRAKVSDFGLSRQAEE 389 (557)
Q Consensus 312 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~--ivH~dlk~~NIll~~~~~~kl~Dfgla~~~~~ 389 (557)
|+++|+|.+++... ....+++..++.++.|++.||+|||+ .+ ++||||||+||+++.++.++|+|||++.....
T Consensus 90 ~~~~~~L~~~l~~~-~~~~~~~~~~~~i~~qi~~~l~~lH~---~~~~i~H~dikp~Nil~~~~~~~~l~~~~~~~~~~~ 165 (271)
T 3kmu_A 90 WMPYGSLYNVLHEG-TNFVVDQSQAVKFALDMARGMAFLHT---LEPLIPRHALNSRSVMIDEDMTARISMADVKFSFQS 165 (271)
T ss_dssp CCTTCBHHHHHHSC-SSCCCCHHHHHHHHHHHHHHHHHHTT---SSSCCTTCCCSGGGEEECTTSCEEEEGGGSCCTTSC
T ss_pred ccCCCcHHHHHhhc-ccCCCCHHHHHHHHHHHHHHHHHHhc---CCCceecCCCccceEEEcCCcceeEEeccceeeecc
Confidence 99999999999853 23368999999999999999999998 78 99999999999999999999999988754332
Q ss_pred CCccccccccCCCCccCCcccCCCCCCc---ccceehhHHHHHHHHhCCCCCCCCCccccccHHHHHHHHHhcCCccccc
Q 008707 390 DLTHISSVARGTVGYLDPEYYGNQQLTE---KSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIV 466 (557)
Q Consensus 390 ~~~~~~~~~~g~~~y~aPE~l~~~~~s~---~~DvwslG~ll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 466 (557)
. ...||+.|+|||.+.+..++. ++||||||+++|||++|+.||..... ..........+....
T Consensus 166 ~------~~~~t~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~------~~~~~~~~~~~~~~~-- 231 (271)
T 3kmu_A 166 P------GRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFADLSN------MEIGMKVALEGLRPT-- 231 (271)
T ss_dssp T------TCBSCGGGSCHHHHHSCGGGSCHHHHHHHHHHHHHHHHHHCSCTTTTSCH------HHHHHHHHHSCCCCC--
T ss_pred c------CccCCccccChhhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCccccCh------HHHHHHHHhcCCCCC--
Confidence 2 234799999999998765544 79999999999999999999974332 111222222221111
Q ss_pred cccccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhhh
Q 008707 467 DPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIK 512 (557)
Q Consensus 467 d~~l~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~evl~~L~~~~~ 512 (557)
.+...+..+.+++.+||+.||++|||++|+++.|+++.+
T Consensus 232 -------~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~L~~l~~ 270 (271)
T 3kmu_A 232 -------IPPGISPHVSKLMKICMNEDPAKRPKFDMIVPILEKMQD 270 (271)
T ss_dssp -------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHCC
T ss_pred -------CCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhc
Confidence 111223478899999999999999999999999998754
No 93
>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A
Probab=100.00 E-value=3.6e-41 Score=334.86 Aligned_cols=260 Identities=21% Similarity=0.270 Sum_probs=197.8
Q ss_pred HHhhcccCCCCceEEEEEEEc-CCcEEEEEEccCcc--chhHHHHHHHHHHHhhcCCCCccceeeEEEecCeeEEEEEec
Q 008707 237 NNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSC--SHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYEYM 313 (557)
Q Consensus 237 ~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~lv~e~~ 313 (557)
|++.+.||+|+||+||+|... +++.||+|++.... ....+.+.+|++++++++||||+++++++.+++..++||||+
T Consensus 4 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 83 (292)
T 3o0g_A 4 YEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFEFC 83 (292)
T ss_dssp EEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred ceeeeEecCCCCeEEEEEEECCCCceEEEEeeeccCCcCCcchHHHHHHHHHhcCCCCCEeeEEeEEEeCCEEEEEEecC
Confidence 456789999999999999876 58999999986432 233467889999999999999999999999999999999999
Q ss_pred CCCChhhhhhccCCCCCcCHHHHHHHHHHHHHHHHHHHcCCCCCeEeeccCCCCEEeCCCCcEEEecccCccccCCCCcc
Q 008707 314 HNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEEDLTH 393 (557)
Q Consensus 314 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfgla~~~~~~~~~ 393 (557)
.+ ++.+.+.. ....+++..+..++.|++.||+|||+ .||+||||||+||+++.++.+||+|||++.........
T Consensus 84 ~~-~l~~~~~~--~~~~l~~~~~~~~~~ql~~~l~~lH~---~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~ 157 (292)
T 3o0g_A 84 DQ-DLKKYFDS--CNGDLDPEIVKSFLFQLLKGLGFCHS---RNVLHRDLKPQNLLINRNGELKLANFGLARAFGIPVRC 157 (292)
T ss_dssp SE-EHHHHHHH--TTTCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTSCEEECCCTTCEECCSCCSC
T ss_pred CC-CHHHHHHh--CCCCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEEcCCCCEEEeecccceecCCcccc
Confidence 75 56555543 34679999999999999999999999 99999999999999999999999999999876543222
Q ss_pred ccccccCCCCccCCcccCCCC-CCcccceehhHHHHHHHHhCCCCCCCCCccccccHHHHHHHHHhcCCcccc------c
Q 008707 394 ISSVARGTVGYLDPEYYGNQQ-LTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISI------V 466 (557)
Q Consensus 394 ~~~~~~g~~~y~aPE~l~~~~-~s~~~DvwslG~ll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~------~ 466 (557)
.....||+.|+|||.+.+.. ++.++||||+|+++|+|++|..||...... ......+............ .
T Consensus 158 -~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~~~~p~~~~~~~--~~~~~~i~~~~~~~~~~~~~~~~~~~ 234 (292)
T 3o0g_A 158 -YSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDV--DDQLKRIFRLLGTPTEEQWPSMTKLP 234 (292)
T ss_dssp -CCSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSSH--HHHHHHHHHHHCCCCTTTCTTGGGST
T ss_pred -ccCCccccCCcChHHHcCCCCcCchHHHHHHHHHHHHHHHcCCCCcCCCCH--HHHHHHHHHHhCCCChhhhhhhcccc
Confidence 23345899999999997765 799999999999999999988886422211 1111111111111100000 0
Q ss_pred c---------ccccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 008707 467 D---------PVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 505 (557)
Q Consensus 467 d---------~~l~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~evl~ 505 (557)
+ ..............+.+++.+||+.||++|||++|+++
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 282 (292)
T 3o0g_A 235 DYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQ 282 (292)
T ss_dssp TCCCCCCCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred cccccccccCCcchhhcccccChHHHHHHHHHhccChhhCCCHHHHhc
Confidence 0 00000111223447889999999999999999999985
No 94
>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}
Probab=100.00 E-value=4.8e-41 Score=345.45 Aligned_cols=251 Identities=23% Similarity=0.320 Sum_probs=199.5
Q ss_pred hcccCCCCceEEEEEEEc-CCcEEEEEEccCccchhHHHHHHHHHHHhhcCCCCccceeeEEEecCeeEEEEEecCCCCh
Q 008707 240 CKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCSHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYEYMHNGTL 318 (557)
Q Consensus 240 ~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~lv~e~~~~gsL 318 (557)
.+.||+|+||.||+|... +|+.||+|++........+.+.+|++++++++||||+++++++.+.+..++||||+++++|
T Consensus 94 ~~~lG~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~E~~~~~~L 173 (373)
T 2x4f_A 94 TEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQLYDAFESKNDIVLVMEYVDGGEL 173 (373)
T ss_dssp EEECC-----CEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCTTCEE
T ss_pred ceEEecCcCEEEEEEEEcCCCcEEEEEEEcccccccHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeCCCCCcH
Confidence 467999999999999875 6899999999876556667899999999999999999999999999999999999999999
Q ss_pred hhhhhccCCCCCcCHHHHHHHHHHHHHHHHHHHcCCCCCeEeeccCCCCEEe--CCCCcEEEecccCccccCCCCccccc
Q 008707 319 RDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILL--DINMRAKVSDFGLSRQAEEDLTHISS 396 (557)
Q Consensus 319 ~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~dlk~~NIll--~~~~~~kl~Dfgla~~~~~~~~~~~~ 396 (557)
.+++.. ....+++..++.++.||+.||+|||+ .+|+||||||+|||+ +.++.+||+|||++........ ..
T Consensus 174 ~~~l~~--~~~~l~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dlkp~NIll~~~~~~~~kl~DFG~a~~~~~~~~--~~ 246 (373)
T 2x4f_A 174 FDRIID--ESYNLTELDTILFMKQICEGIRHMHQ---MYILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPREK--LK 246 (373)
T ss_dssp HHHHHH--TGGGCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEEEETTTTEEEECCCSSCEECCTTCB--CC
T ss_pred HHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHHH---CCcccccCCHHHEEEecCCCCcEEEEeCCCceecCCccc--cc
Confidence 998864 24568999999999999999999998 999999999999999 5678899999999987654332 22
Q ss_pred cccCCCCccCCcccCCCCCCcccceehhHHHHHHHHhCCCCCCCCCccccccHHHHHHHHHhcCCccccccccccCCCCH
Q 008707 397 VARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPVLIGNVKI 476 (557)
Q Consensus 397 ~~~g~~~y~aPE~l~~~~~s~~~DvwslG~ll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~ 476 (557)
...||+.|+|||++.+..++.++|||||||++|||++|+.||...+.. +........... . .......
T Consensus 247 ~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~------~~~~~i~~~~~~--~-~~~~~~~--- 314 (373)
T 2x4f_A 247 VNFGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLGDNDA------ETLNNILACRWD--L-EDEEFQD--- 314 (373)
T ss_dssp CCCSSCTTCCHHHHTTCBCCHHHHHHHHHHHHHHHHHSSCTTCCSSHH------HHHHHHHHTCCC--S-CSGGGTT---
T ss_pred cccCCCcEeChhhccCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCHH------HHHHHHHhccCC--C-Chhhhcc---
Confidence 345899999999999999999999999999999999999999754322 111222211110 0 0011111
Q ss_pred HHHHHHHHHHHHccccCCCCCCCHHHHHH--HHHhh
Q 008707 477 ESIWRIAEVAIQCVEQRGFSRPKMQEIVL--AIQDS 510 (557)
Q Consensus 477 ~~~~~l~~li~~cl~~~P~~RPt~~evl~--~L~~~ 510 (557)
....+.+++.+||+.||++|||++|+++ .+++.
T Consensus 315 -~~~~~~~li~~~L~~dp~~Rps~~e~l~hp~~~~~ 349 (373)
T 2x4f_A 315 -ISEEAKEFISKLLIKEKSWRISASEALKHPWLSDH 349 (373)
T ss_dssp -SCHHHHHHHHTTSCSSGGGSCCHHHHHHSHHHHCH
T ss_pred -CCHHHHHHHHHHcCCChhhCCCHHHHhcCcCcCCC
Confidence 2347889999999999999999999997 45544
No 95
>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*
Probab=100.00 E-value=5.9e-41 Score=341.08 Aligned_cols=247 Identities=23% Similarity=0.345 Sum_probs=198.0
Q ss_pred HHhhcccCCCCceEEEEEEEc-CCcEEEEEEccCcc---chhHHHHHHHHHHHhhc-CCCCccceeeEEEecCeeEEEEE
Q 008707 237 NNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSC---SHRTQQFVTEVALLSRI-HHRNLVPLIGYCEEEHQRILVYE 311 (557)
Q Consensus 237 ~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~il~~l-~h~nIv~~~~~~~~~~~~~lv~e 311 (557)
|++.+.||+|+||.||+|..+ +++.||+|++.... ....+.+.+|..++.++ +||||+++++++.+.+..++|||
T Consensus 11 y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~lv~e 90 (345)
T 3a8x_A 11 FDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIE 90 (345)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGSCSHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEEC
T ss_pred eEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEhHHhcchHHHHHHHHHHHHHHhcCCCCccCeEEEEEEeCCEEEEEEe
Confidence 456789999999999999876 58899999987542 23446688999999988 89999999999999999999999
Q ss_pred ecCCCChhhhhhccCCCCCcCHHHHHHHHHHHHHHHHHHHcCCCCCeEeeccCCCCEEeCCCCcEEEecccCccccCCCC
Q 008707 312 YMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEEDL 391 (557)
Q Consensus 312 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfgla~~~~~~~ 391 (557)
|+++|+|.+++.. ...+++..++.++.||+.||+|||+ ++|+||||||+|||++.++.+||+|||+++......
T Consensus 91 ~~~gg~L~~~l~~---~~~l~~~~~~~~~~qi~~aL~~LH~---~~ivHrDlkp~NIll~~~g~~kL~DFG~a~~~~~~~ 164 (345)
T 3a8x_A 91 YVNGGDLMFHMQR---QRKLPEEHARFYSAEISLALNYLHE---RGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPG 164 (345)
T ss_dssp CCCSCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCCGGGEEECTTSCEEECCGGGCBCSCCTT
T ss_pred CCCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHH---CCceecCCCHHHEEECCCCCEEEEeccccccccCCC
Confidence 9999999999874 3568999999999999999999998 999999999999999999999999999998643222
Q ss_pred ccccccccCCCCccCCcccCCCCCCcccceehhHHHHHHHHhCCCCCCCCCcccc--ccHHHHHHHHHhcCCcccccccc
Q 008707 392 THISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAE--LNIVHWARSMIKKGDVISIVDPV 469 (557)
Q Consensus 392 ~~~~~~~~g~~~y~aPE~l~~~~~s~~~DvwslG~ll~elltg~~pf~~~~~~~~--~~~~~~~~~~~~~~~~~~~~d~~ 469 (557)
. ......||+.|+|||++.+..++.++|||||||++|||++|+.||........ ..........+..+...
T Consensus 165 ~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~i~~~~~~------ 237 (345)
T 3a8x_A 165 D-TTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIR------ 237 (345)
T ss_dssp C-CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTTTC-------CHHHHHHHHHHCCCC------
T ss_pred C-cccccCCCccccCccccCCCCCChHHhHHHHHHHHHHHHhCCCCcCCcccccccccccHHHHHHHHHcCCCC------
Confidence 2 23345699999999999999999999999999999999999999974322111 11112222222222211
Q ss_pred ccCCCCHHHHHHHHHHHHHccccCCCCCCCH
Q 008707 470 LIGNVKIESIWRIAEVAIQCVEQRGFSRPKM 500 (557)
Q Consensus 470 l~~~~~~~~~~~l~~li~~cl~~~P~~RPt~ 500 (557)
.+......+.+++.+||+.||++||++
T Consensus 238 ----~p~~~s~~~~~li~~lL~~dP~~R~~~ 264 (345)
T 3a8x_A 238 ----IPRSLSVKAASVLKSFLNKDPKERLGC 264 (345)
T ss_dssp ----CCTTSCHHHHHHHHHHTCSSTTTSTTC
T ss_pred ----CCCCCCHHHHHHHHHHhcCCHhHCCCC
Confidence 111123468899999999999999996
No 96
>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*
Probab=100.00 E-value=1.5e-40 Score=337.84 Aligned_cols=268 Identities=25% Similarity=0.403 Sum_probs=211.3
Q ss_pred hHHHHHHHHhhcccCCCCceEEEEEEEcCCcEEEEEEccCccchhHHHHHHHHHHHhh--cCCCCccceeeEEEecC---
Q 008707 230 PELEEATNNFCKKIGKGSFGSVYYGKMKDGKEVAVKIMADSCSHRTQQFVTEVALLSR--IHHRNLVPLIGYCEEEH--- 304 (557)
Q Consensus 230 ~~~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~il~~--l~h~nIv~~~~~~~~~~--- 304 (557)
.+.....|++.+.||+|+||.||+|.+. ++.||+|++... ..+.+.+|.+++.. ++||||+++++++....
T Consensus 37 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~vavK~~~~~---~~~~~~~e~~~~~~~~l~h~ni~~~~~~~~~~~~~~ 112 (342)
T 1b6c_B 37 QRTIARTIVLQESIGKGRFGEVWRGKWR-GEEVAVKIFSSR---EERSWFREAEIYQTVMLRHENILGFIAADNKDNGTW 112 (342)
T ss_dssp HHHHHHHCEEEEEEEEETTEEEEEEEET-TEEEEEEEECGG---GHHHHHHHHHHHHHSCCCCTTBCCEEEEEECCCSSC
T ss_pred cccccccEEEEeeecCCCCcEEEEEEEc-CccEEEEEeCch---hHHHHHHHHHHHHHhhcCCCcEEEEEeeecccCCcc
Confidence 4455667778999999999999999985 899999998643 34567789999887 68999999999998775
Q ss_pred -eeEEEEEecCCCChhhhhhccCCCCCcCHHHHHHHHHHHHHHHHHHH--------cCCCCCeEeeccCCCCEEeCCCCc
Q 008707 305 -QRILVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLH--------TGCNPGIIHRDVKSSNILLDINMR 375 (557)
Q Consensus 305 -~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH--------~~~~~~ivH~dlk~~NIll~~~~~ 375 (557)
..++||||+++|+|.+++.. ..+++..++.++.|++.||+||| + .+++||||||+||+++.++.
T Consensus 113 ~~~~lv~e~~~~g~L~~~l~~----~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~---~~ivH~Dlkp~NIll~~~~~ 185 (342)
T 1b6c_B 113 TQLWLVSDYHEHGSLFDYLNR----YTVTVEGMIKLALSTASGLAHLHMEIVGTQGK---PAIAHRDLKSKNILVKKNGT 185 (342)
T ss_dssp CCEEEEECCCTTCBHHHHHHH----CCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCB---CEEECSCCSGGGEEECTTSC
T ss_pred ceeEEEEeecCCCcHHHHHhc----cCccHHHHHHHHHHHHHHHHHHHHHHhhhccc---CCeeeCCCCHHHEEECCCCC
Confidence 78999999999999999974 35899999999999999999999 6 89999999999999999999
Q ss_pred EEEecccCccccCCCCcc---ccccccCCCCccCCcccCCC------CCCcccceehhHHHHHHHHhC----------CC
Q 008707 376 AKVSDFGLSRQAEEDLTH---ISSVARGTVGYLDPEYYGNQ------QLTEKSDVYSFGVVLLELISG----------KK 436 (557)
Q Consensus 376 ~kl~Dfgla~~~~~~~~~---~~~~~~g~~~y~aPE~l~~~------~~s~~~DvwslG~ll~elltg----------~~ 436 (557)
+||+|||++......... ......||+.|+|||.+.+. .++.++||||||+++|||+|| ..
T Consensus 186 ~kL~Dfg~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~ 265 (342)
T 1b6c_B 186 CCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQL 265 (342)
T ss_dssp EEECCCTTCEEEETTTTEEEECCCSCCCCGGGCCHHHHTSCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCC
T ss_pred EEEEECCCceeccccccccccccccCCcCcccCCHhhhcccccccccccCCcccHHHHHHHHHHHHhccCcCCccccccc
Confidence 999999999876443321 12334589999999999775 334789999999999999999 77
Q ss_pred CCCCCCccccccHHHHHHHHHhcCCccccccccccCC-CCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhhhhh
Q 008707 437 PVSVEDFGAELNIVHWARSMIKKGDVISIVDPVLIGN-VKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKIE 514 (557)
Q Consensus 437 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~-~~~~~~~~l~~li~~cl~~~P~~RPt~~evl~~L~~~~~~~ 514 (557)
||...... ......+... +..+.. .+.+... .....+..+.+++.+||+.||++|||++||++.|+++.+.+
T Consensus 266 p~~~~~~~-~~~~~~~~~~-~~~~~~----~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L~~i~~~~ 338 (342)
T 1b6c_B 266 PYYDLVPS-DPSVEEMRKV-VCEQKL----RPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQE 338 (342)
T ss_dssp TTTTTSCS-SCCHHHHHHH-HTTSCC----CCCCCGGGGTSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHHHHHTT
T ss_pred CccccCcC-cccHHHHHHH-HHHHHh----CCCCcccccchhHHHHHHHHHHHHhccChhhCCCHHHHHHHHHHHHHHh
Confidence 88643322 1122222222 211111 1111111 12356678999999999999999999999999999998754
No 97
>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A
Probab=100.00 E-value=1.9e-40 Score=329.82 Aligned_cols=264 Identities=22% Similarity=0.308 Sum_probs=207.2
Q ss_pred HHHHhhcccCCCCceEEEEEEE-cCCcEEEEEEccCccchhHHHHHHHHHHHhhcCCCCccceeeEE-EecCeeEEEEEe
Q 008707 235 ATNNFCKKIGKGSFGSVYYGKM-KDGKEVAVKIMADSCSHRTQQFVTEVALLSRIHHRNLVPLIGYC-EEEHQRILVYEY 312 (557)
Q Consensus 235 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~-~~~~~~~lv~e~ 312 (557)
..|++.+.||+|+||.||+|.. .+++.||+|++.... ..+.+.+|+++++.++|++++..++.+ ...+..++||||
T Consensus 9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e~ 86 (296)
T 4hgt_A 9 NRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKT--KHPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVMEL 86 (296)
T ss_dssp --CEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEC-----CCCHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEEEC
T ss_pred CceEEeeeecCCCCeEEEEEEEcCCCceEEEEeecccc--cchHHHHHHHHHHHhcCCCCCCeeeeecCCCCceEEEEEc
Confidence 4566789999999999999986 468899999865432 223577899999999988877777665 566778999999
Q ss_pred cCCCChhhhhhccCCCCCcCHHHHHHHHHHHHHHHHHHHcCCCCCeEeeccCCCCEEe---CCCCcEEEecccCccccCC
Q 008707 313 MHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILL---DINMRAKVSDFGLSRQAEE 389 (557)
Q Consensus 313 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~dlk~~NIll---~~~~~~kl~Dfgla~~~~~ 389 (557)
+ +++|.+++... ...+++..+..++.|++.||+|||+ .+++||||||+||++ +.++.+||+|||++.....
T Consensus 87 ~-~~~L~~~~~~~--~~~~~~~~~~~i~~qi~~~l~~LH~---~~ivH~Dlkp~NIl~~~~~~~~~~kL~Dfg~a~~~~~ 160 (296)
T 4hgt_A 87 L-GPSLEDLFNFC--SRKFSLKTVLLLADQMISRIEYIHS---KNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRD 160 (296)
T ss_dssp C-CCBHHHHHHHT--TSCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECCGGGTTCEEECCCTTCEECBC
T ss_pred c-CCCHHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHeeeeccCCCCeEEEecCccceeccC
Confidence 9 99999998743 4568999999999999999999998 999999999999999 7889999999999987654
Q ss_pred CCcc------ccccccCCCCccCCcccCCCCCCcccceehhHHHHHHHHhCCCCCCCCCccccccHHHHHHHHHhcCCcc
Q 008707 390 DLTH------ISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVI 463 (557)
Q Consensus 390 ~~~~------~~~~~~g~~~y~aPE~l~~~~~s~~~DvwslG~ll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 463 (557)
.... ......||+.|+|||.+.+..++.++||||||+++|+|++|+.||.........................
T Consensus 161 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (296)
T 4hgt_A 161 ARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIE 240 (296)
T ss_dssp TTTCCBCCCCCSCCCCSCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHHHHHSCHH
T ss_pred cccCccCCCCcccccCCCccccchHHhcCCCCCchhHHHHHHHHHHHHhcCCCCCcccchhhhhhhhhhhhcccccchhh
Confidence 3221 1234468999999999999999999999999999999999999998655443333332222211111110
Q ss_pred ccccccccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhhhhhc
Q 008707 464 SIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKIEK 515 (557)
Q Consensus 464 ~~~d~~l~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~evl~~L~~~~~~~~ 515 (557)
. ....+ +..+.+++.+||+.+|++|||++||++.|+++.....
T Consensus 241 ~-----~~~~~----~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~~~~~~~ 283 (296)
T 4hgt_A 241 V-----LCKGY----PSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQG 283 (296)
T ss_dssp H-----HTTTS----CHHHHHHHHHHHTSCTTCCCCHHHHHHHHHHHHHHHT
T ss_pred h-----hhccC----CHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHhC
Confidence 0 01111 2478899999999999999999999999999988654
No 98
>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*
Probab=100.00 E-value=3.9e-42 Score=347.61 Aligned_cols=267 Identities=25% Similarity=0.380 Sum_probs=210.7
Q ss_pred HHHHhhcccCCCCceEEEEEEE-----cCCcEEEEEEccCccchhHHHHHHHHHHHhhcCCCCccceeeEEE--ecCeeE
Q 008707 235 ATNNFCKKIGKGSFGSVYYGKM-----KDGKEVAVKIMADSCSHRTQQFVTEVALLSRIHHRNLVPLIGYCE--EEHQRI 307 (557)
Q Consensus 235 ~~~~~~~~lG~G~~g~Vy~~~~-----~~~~~vavK~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~--~~~~~~ 307 (557)
..|++.+.||+|+||.||+|.+ .+++.||+|++........+.+.+|+++++.++||||+++++++. +....+
T Consensus 23 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 102 (327)
T 3lxl_A 23 RHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLR 102 (327)
T ss_dssp GGEEEEEEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSSCEEE
T ss_pred hhhhhhhhccCCCCeEEEEEEeccCCCCcceEEEEEEeccCCHHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCCceEE
Confidence 4456789999999999999984 358899999998766666778999999999999999999999886 456688
Q ss_pred EEEEecCCCChhhhhhccCCCCCcCHHHHHHHHHHHHHHHHHHHcCCCCCeEeeccCCCCEEeCCCCcEEEecccCcccc
Q 008707 308 LVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQA 387 (557)
Q Consensus 308 lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfgla~~~ 387 (557)
+||||+++++|.+++... ...+++..++.++.|++.||+|||+ .+++||||||+||+++.++.+||+|||++...
T Consensus 103 lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~i~~qi~~al~~lH~---~~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~ 177 (327)
T 3lxl_A 103 LVMEYLPSGCLRDFLQRH--RARLDASRLLLYSSQICKGMEYLGS---RRCVHRDLAARNILVESEAHVKIADFGLAKLL 177 (327)
T ss_dssp EEEECCTTCBHHHHHHHH--GGGCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEEEETTEEEECCGGGCEEC
T ss_pred EEEeecCCCCHHHHHHhc--ccCCCHHHHHHHHHHHHHHHHHHHh---CCccCCCCChhhEEECCCCCEEEcccccceec
Confidence 999999999999999753 3458999999999999999999998 99999999999999999999999999999876
Q ss_pred CCCCcc--ccccccCCCCccCCcccCCCCCCcccceehhHHHHHHHHhCCCCCCCCCcc--------ccccHHHHHHHHH
Q 008707 388 EEDLTH--ISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFG--------AELNIVHWARSMI 457 (557)
Q Consensus 388 ~~~~~~--~~~~~~g~~~y~aPE~l~~~~~s~~~DvwslG~ll~elltg~~pf~~~~~~--------~~~~~~~~~~~~~ 457 (557)
...... ......+++.|+|||.+.+..++.++||||||+++|+|++|+.||...... ............+
T Consensus 178 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (327)
T 3lxl_A 178 PLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGCERDVPALSRLLELL 257 (327)
T ss_dssp CTTCSEEECSSCCCSCGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHCC----CCHHHHHHHHH
T ss_pred ccCCccceeeccCCccccccCHHHhccCCCChHHhHHHHHHHHHHHHhCCCCCccccchhhhhcccccccccHHHHHHHh
Confidence 543321 223345788899999999888999999999999999999999998633221 0011111122222
Q ss_pred hcCCccccccccccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhhhhhc
Q 008707 458 KKGDVISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKIEK 515 (557)
Q Consensus 458 ~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~evl~~L~~~~~~~~ 515 (557)
..+... ..+...+..+.+++.+||+.||++|||++||++.|+.+.....
T Consensus 258 ~~~~~~---------~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~~~ 306 (327)
T 3lxl_A 258 EEGQRL---------PAPPACPAEVHELMKLCWAPSPQDRPSFSALGPQLDMLWSGSR 306 (327)
T ss_dssp HTTCCC---------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHC-----
T ss_pred hcccCC---------CCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhhhc
Confidence 222111 1122234578899999999999999999999999999876443
No 99
>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*
Probab=100.00 E-value=1.3e-41 Score=345.49 Aligned_cols=245 Identities=24% Similarity=0.365 Sum_probs=200.1
Q ss_pred HHHhhcccCCCCceEEEEEEEc-CCcEEEEEEccCcc---chhHHHHHHHHHHHhhc-CCCCccceeeEEEecCeeEEEE
Q 008707 236 TNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSC---SHRTQQFVTEVALLSRI-HHRNLVPLIGYCEEEHQRILVY 310 (557)
Q Consensus 236 ~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~il~~l-~h~nIv~~~~~~~~~~~~~lv~ 310 (557)
.|++.+.||+|+||.||+|..+ +|+.||+|+++... ....+.+..|.+++..+ +||||+++++++.+.+..++||
T Consensus 18 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~iv~l~~~~~~~~~~~lv~ 97 (345)
T 1xjd_A 18 DFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENLFFVM 97 (345)
T ss_dssp TEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEEEE
T ss_pred HeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhHHhhhhhhHHHHHHHHHHHHhcCCCCCCCcEEEEEEeCCEEEEEE
Confidence 3456789999999999999886 58899999987532 23346678899999887 8999999999999999999999
Q ss_pred EecCCCChhhhhhccCCCCCcCHHHHHHHHHHHHHHHHHHHcCCCCCeEeeccCCCCEEeCCCCcEEEecccCccccCCC
Q 008707 311 EYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEED 390 (557)
Q Consensus 311 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfgla~~~~~~ 390 (557)
||+++|+|.+++.. ...+++..+..++.||+.||+|||+ +||+||||||+|||++.++.+||+|||+++.....
T Consensus 98 E~~~gg~L~~~l~~---~~~~~~~~~~~~~~qi~~aL~~LH~---~~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~ 171 (345)
T 1xjd_A 98 EYLNGGDLMYHIQS---CHKFDLSRATFYAAEIILGLQFLHS---KGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLG 171 (345)
T ss_dssp ECCTTCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCCGGGEEECTTSCEEECCCTTCBCCCCT
T ss_pred eCCCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHH---CCeEeCCCChhhEEECCCCCEEEeEChhhhhcccC
Confidence 99999999999974 3568999999999999999999998 99999999999999999999999999999864322
Q ss_pred CccccccccCCCCccCCcccCCCCCCcccceehhHHHHHHHHhCCCCCCCCCccccccHHHHHHHHHhcCCccccccccc
Q 008707 391 LTHISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPVL 470 (557)
Q Consensus 391 ~~~~~~~~~g~~~y~aPE~l~~~~~s~~~DvwslG~ll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l 470 (557)
.. ......||+.|+|||++.+..++.++|||||||++|||++|+.||...+... + . ..+..+.. .+
T Consensus 172 ~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~---~---~-~~i~~~~~------~~ 237 (345)
T 1xjd_A 172 DA-KTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEE---L---F-HSIRMDNP------FY 237 (345)
T ss_dssp TC-CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH---H---H-HHHHHCCC------CC
T ss_pred CC-cccCCCCCcccCChhhhcCCCCCChhhhHHHHHHHHHHhcCCCCCCCCCHHH---H---H-HHHHhCCC------CC
Confidence 22 2334569999999999999999999999999999999999999997543211 1 1 11222211 11
Q ss_pred cCCCCHHHHHHHHHHHHHccccCCCCCCCHH-HHH
Q 008707 471 IGNVKIESIWRIAEVAIQCVEQRGFSRPKMQ-EIV 504 (557)
Q Consensus 471 ~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~-evl 504 (557)
+......+.+++.+||..||++||++. ||+
T Consensus 238 ----p~~~s~~~~~li~~lL~~dp~~R~~~~~~i~ 268 (345)
T 1xjd_A 238 ----PRWLEKEAKDLLVKLFVREPEKRLGVRGDIR 268 (345)
T ss_dssp ----CTTSCHHHHHHHHHHSCSSGGGSBTTBSCGG
T ss_pred ----CcccCHHHHHHHHHHhcCCHhHcCCChHHHH
Confidence 111234688999999999999999998 665
No 100
>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*
Probab=100.00 E-value=3.3e-41 Score=352.57 Aligned_cols=253 Identities=24% Similarity=0.324 Sum_probs=202.0
Q ss_pred HHhhcccCCCCceEEEEEEEcC-CcEEEEEEccCccc---hhHHHHHHHHHHHhhcCCCCccceeeEEEecCeeEEEEEe
Q 008707 237 NNFCKKIGKGSFGSVYYGKMKD-GKEVAVKIMADSCS---HRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYEY 312 (557)
Q Consensus 237 ~~~~~~lG~G~~g~Vy~~~~~~-~~~vavK~~~~~~~---~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~lv~e~ 312 (557)
|++.+.||+|+||.||+|.++. ++.||+|++.+... ...+.+.+|..++..++||||+++++++.+.+..++||||
T Consensus 76 y~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~~~~~~lV~Ey 155 (437)
T 4aw2_A 76 FEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLHYAFQDDNNLYLVMDY 155 (437)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTTTCCHHHHHHHHHHSCTTTBCCEEEEEECSSEEEEEECC
T ss_pred eEEEEEEEeCCCEEEEEEEEcCCCcEEEEEEEEHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeCCEEEEEEec
Confidence 4457899999999999999874 78999999864321 1223488999999999999999999999999999999999
Q ss_pred cCCCChhhhhhccCCCCCcCHHHHHHHHHHHHHHHHHHHcCCCCCeEeeccCCCCEEeCCCCcEEEecccCccccCCCCc
Q 008707 313 MHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEEDLT 392 (557)
Q Consensus 313 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfgla~~~~~~~~ 392 (557)
+++|+|.+++... ...+++..+..++.||+.||+|||+ .+|+||||||+|||++.++.+||+|||+++.......
T Consensus 156 ~~gg~L~~~l~~~--~~~l~e~~~~~~~~qi~~aL~~LH~---~giiHrDLKp~NILl~~~g~vkL~DFGla~~~~~~~~ 230 (437)
T 4aw2_A 156 YVGGDLLTLLSKF--EDRLPEEMARFYLAEMVIAIDSVHQ---LHYVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGT 230 (437)
T ss_dssp CTTCBHHHHHHTT--TTCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTSCEEECCCTTCEECCTTSC
T ss_pred CCCCcHHHHHHHc--cCCCCHHHHHHHHHHHHHHHHHHHh---CCeEecccCHHHeeEcCCCCEEEcchhhhhhcccCCC
Confidence 9999999999742 4669999999999999999999998 9999999999999999999999999999987655544
Q ss_pred cccccccCCCCccCCcccC-----CCCCCcccceehhHHHHHHHHhCCCCCCCCCccccccHHHHHHHHHhcCCcccccc
Q 008707 393 HISSVARGTVGYLDPEYYG-----NQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVD 467 (557)
Q Consensus 393 ~~~~~~~g~~~y~aPE~l~-----~~~~s~~~DvwslG~ll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 467 (557)
.......||+.|+|||++. ...++.++|||||||++|||++|+.||...+..+. ....+........
T Consensus 231 ~~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~~~~~~------~~~i~~~~~~~~~-- 302 (437)
T 4aw2_A 231 VQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVET------YGKIMNHKERFQF-- 302 (437)
T ss_dssp EECCSCCSCGGGCCHHHHHHHHTSCCEECTHHHHHHHHHHHHHHHHSSCTTCCSSHHHH------HHHHHTHHHHCCC--
T ss_pred cccccccCCcCeeChHHHhhcccCCCCCCCcCeeHHHHHHHHHHHhCCCCCCCCChhHH------HHhhhhccccccC--
Confidence 4444567999999999986 56789999999999999999999999975432211 1111111000000
Q ss_pred ccccCCCCHHHHHHHHHHHHHccccCCCC--CCCHHHHHHH
Q 008707 468 PVLIGNVKIESIWRIAEVAIQCVEQRGFS--RPKMQEIVLA 506 (557)
Q Consensus 468 ~~l~~~~~~~~~~~l~~li~~cl~~~P~~--RPt~~evl~~ 506 (557)
+..... ....+.+++.+|+..+|++ ||+++|+++.
T Consensus 303 p~~~~~----~s~~~~dLi~~lL~~~~~r~~r~~~~eil~H 339 (437)
T 4aw2_A 303 PTQVTD----VSENAKDLIRRLICSREHRLGQNGIEDFKKH 339 (437)
T ss_dssp CSSCCC----SCHHHHHHHHTTSSCGGGCTTTTTTHHHHTS
T ss_pred Cccccc----CCHHHHHHHHHHhcccccccCCCCHHHHhCC
Confidence 111111 2236789999999888888 9999999864
No 101
>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*
Probab=100.00 E-value=3.8e-41 Score=340.30 Aligned_cols=247 Identities=23% Similarity=0.350 Sum_probs=192.2
Q ss_pred HHHHhhcccCCCCceEEEEEEE----cCCcEEEEEEccCcc----chhHHHHHHHHHHHhhcCCCCccceeeEEEecCee
Q 008707 235 ATNNFCKKIGKGSFGSVYYGKM----KDGKEVAVKIMADSC----SHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQR 306 (557)
Q Consensus 235 ~~~~~~~~lG~G~~g~Vy~~~~----~~~~~vavK~~~~~~----~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~ 306 (557)
..|++.+.||+|+||.||++.. .+++.||+|++.... ......+.+|+++++.++||||+++++++...+..
T Consensus 17 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~ 96 (327)
T 3a62_A 17 ECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYAFQTGGKL 96 (327)
T ss_dssp GGEEEEEEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC--------------HHHHHHHCCCTTBCCEEEEEECSSCE
T ss_pred HHeEEEEEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhhhhhHHHHHHHHHHHHHhCCCCCccceeEEEEcCCEE
Confidence 3456789999999999999987 468999999987542 22345678899999999999999999999999999
Q ss_pred EEEEEecCCCChhhhhhccCCCCCcCHHHHHHHHHHHHHHHHHHHcCCCCCeEeeccCCCCEEeCCCCcEEEecccCccc
Q 008707 307 ILVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQ 386 (557)
Q Consensus 307 ~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfgla~~ 386 (557)
++||||+++++|.+++.. ...+++..+..++.||+.||+|||+ ++|+||||||+|||++.++.+||+|||++..
T Consensus 97 ~lv~e~~~~~~L~~~l~~---~~~~~~~~~~~~~~qi~~al~~lH~---~~ivH~Dlkp~Nill~~~~~~kl~Dfg~~~~ 170 (327)
T 3a62_A 97 YLILEYLSGGELFMQLER---EGIFMEDTACFYLAEISMALGHLHQ---KGIIYRDLKPENIMLNHQGHVKLTDFGLCKE 170 (327)
T ss_dssp EEEEECCTTEEHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCTTTEEECTTSCEEECCCSCC--
T ss_pred EEEEeCCCCCcHHHHHHh---CCCCCHHHHHHHHHHHHHHHHHHHh---CCEEcccCCHHHeEECCCCcEEEEeCCcccc
Confidence 999999999999999974 3568899999999999999999998 9999999999999999999999999999876
Q ss_pred cCCCCccccccccCCCCccCCcccCCCCCCcccceehhHHHHHHHHhCCCCCCCCCccccccHHHHHHHHHhcCCccccc
Q 008707 387 AEEDLTHISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIV 466 (557)
Q Consensus 387 ~~~~~~~~~~~~~g~~~y~aPE~l~~~~~s~~~DvwslG~ll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 466 (557)
...... ......||+.|+|||.+.+..++.++||||||+++|+|++|+.||...+.. ....... .+..
T Consensus 171 ~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~------~~~~~i~-~~~~---- 238 (327)
T 3a62_A 171 SIHDGT-VTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRK------KTIDKIL-KCKL---- 238 (327)
T ss_dssp ---------CTTSSCCTTSCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH------HHHHHHH-HTCC----
T ss_pred cccCCc-cccccCCCcCccCHhhCcCCCCCCcccchhHHHHHHHHHHCCCCCCCCCHH------HHHHHHH-hCCC----
Confidence 433222 123346899999999999999999999999999999999999999754321 1111111 1111
Q ss_pred cccccCCCCHHHHHHHHHHHHHccccCCCCCC-----CHHHHHH
Q 008707 467 DPVLIGNVKIESIWRIAEVAIQCVEQRGFSRP-----KMQEIVL 505 (557)
Q Consensus 467 d~~l~~~~~~~~~~~l~~li~~cl~~~P~~RP-----t~~evl~ 505 (557)
..+......+.+++.+||+.||++|| ++.|+++
T Consensus 239 ------~~p~~~~~~~~~li~~~L~~dp~~R~~~~~~~~~e~l~ 276 (327)
T 3a62_A 239 ------NLPPYLTQEARDLLKKLLKRNAASRLGAGPGDAGEVQA 276 (327)
T ss_dssp ------CCCTTSCHHHHHHHHHHSCSCGGGSTTSSTTTHHHHHH
T ss_pred ------CCCCCCCHHHHHHHHHHHhcCHhhccCCCCCCHHHHHc
Confidence 01111234788999999999999999 7778776
No 102
>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}
Probab=100.00 E-value=1.7e-40 Score=332.82 Aligned_cols=260 Identities=22% Similarity=0.330 Sum_probs=198.7
Q ss_pred HHHhhcccCCCCceEEEEEEEc-CCcEEEEEEccCccc---hhHHHHHHHHHHHhhcCCCCccceeeEEEecCeeEEEEE
Q 008707 236 TNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCS---HRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYE 311 (557)
Q Consensus 236 ~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~lv~e 311 (557)
.|++.+.||+|+||.||+|... +++.||+|++..... ...+.+.+|+.+++.++||||+++++++..++..++|||
T Consensus 35 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e 114 (309)
T 2h34_A 35 PYRLRRLVGRGGMGDVYEAEDTVRERIVALKLMSETLSSDPVFRTRMQREARTAGRLQEPHVVPIHDFGEIDGQLYVDMR 114 (309)
T ss_dssp CEEEEEEEEECSSSEEEEEEETTTTEEEEEEECGGGGGGSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred cEEEEEEEcCCCCeeEEEEEEcCCCeEEEEEecCcccccCHHHHHHHHHHHHHHhhcCCCCeeEEEEEEeeCCeEEEEEE
Confidence 3556789999999999999876 688999999875422 234678899999999999999999999999999999999
Q ss_pred ecCCCChhhhhhccCCCCCcCHHHHHHHHHHHHHHHHHHHcCCCCCeEeeccCCCCEEeCCCCcEEEecccCccccCCCC
Q 008707 312 YMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEEDL 391 (557)
Q Consensus 312 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfgla~~~~~~~ 391 (557)
|+++++|.+++.. ...+++..++.++.|++.||+|||+ .+++||||||+||+++.++.+||+|||++.......
T Consensus 115 ~~~~~~L~~~l~~---~~~~~~~~~~~i~~qi~~~l~~lH~---~~i~H~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~ 188 (309)
T 2h34_A 115 LINGVDLAAMLRR---QGPLAPPRAVAIVRQIGSALDAAHA---AGATHRDVKPENILVSADDFAYLVDFGIASATTDEK 188 (309)
T ss_dssp CCCCEEHHHHHHH---HCSCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECTTSCEEECSCCC--------
T ss_pred ecCCCCHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHH---CcCCcCCCChHHEEEcCCCCEEEecCccCccccccc
Confidence 9999999999974 3568999999999999999999998 999999999999999999999999999998765443
Q ss_pred ccccccccCCCCccCCcccCCCCCCcccceehhHHHHHHHHhCCCCCCCCCccccccHHHHHHHHHhcCCcccccccccc
Q 008707 392 THISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPVLI 471 (557)
Q Consensus 392 ~~~~~~~~g~~~y~aPE~l~~~~~s~~~DvwslG~ll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~ 471 (557)
........|++.|+|||.+.+..++.++||||||+++|+|++|+.||...+.. .....+...... +
T Consensus 189 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~-------~~~~~~~~~~~~----~--- 254 (309)
T 2h34_A 189 LTQLGNTVGTLYYMAPERFSESHATYRADIYALTCVLYECLTGSPPYQGDQLS-------VMGAHINQAIPR----P--- 254 (309)
T ss_dssp --------CCGGGCCGGGTCC----CCCHHHHHHHHHHHHHHSSCSSCSCHHH-------HHHHHHHSCCCC----G---
T ss_pred cccccccCCCcCccCHHHHcCCCCCchHhHHHHHHHHHHHHHCCCCCCCchHH-------HHHHHhccCCCC----c---
Confidence 33333445899999999999999999999999999999999999999743221 112222221110 0
Q ss_pred CCCCHHHHHHHHHHHHHccccCCCCCC-CHHHHHHHHHhhhhhhc
Q 008707 472 GNVKIESIWRIAEVAIQCVEQRGFSRP-KMQEIVLAIQDSIKIEK 515 (557)
Q Consensus 472 ~~~~~~~~~~l~~li~~cl~~~P~~RP-t~~evl~~L~~~~~~~~ 515 (557)
.......+..+.+++.+||+.||++|| +++++++.|+.......
T Consensus 255 ~~~~~~~~~~l~~li~~~l~~dP~~Rp~s~~~l~~~l~~~l~~~~ 299 (309)
T 2h34_A 255 STVRPGIPVAFDAVIARGMAKNPEDRYVTCGDLSAAAHAALATAD 299 (309)
T ss_dssp GGTSTTCCTHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHTCC---
T ss_pred cccCCCCCHHHHHHHHHhccCCHHHHHHhHHHHHHHHHHHHHhhc
Confidence 001112233688999999999999999 99999999998876543
No 103
>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...
Probab=100.00 E-value=1.8e-41 Score=336.62 Aligned_cols=263 Identities=30% Similarity=0.536 Sum_probs=197.7
Q ss_pred HHHHHHHHhhcccCCCCceEEEEEEEcCCcEEEEEEccCcc--chhHHHHHHHHHHHhhcCCCCccceeeEEEecCeeEE
Q 008707 231 ELEEATNNFCKKIGKGSFGSVYYGKMKDGKEVAVKIMADSC--SHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRIL 308 (557)
Q Consensus 231 ~~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~l 308 (557)
|+....|++.+.||+|+||.||+|.+.. .||+|++.... ....+.+.+|+++++.++||||+++++++ .....++
T Consensus 20 ei~~~~y~~~~~lG~G~~g~Vy~~~~~~--~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~-~~~~~~l 96 (289)
T 3og7_A 20 EIPDGQITVGQRIGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS-TAPQLAI 96 (289)
T ss_dssp BCCTTSCEEEEEEEECSSEEEEEEESSS--EEEEEEESCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEE-CSSSCEE
T ss_pred ccCccceeeeeEecCCCCeEEEEEEEcC--ceEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCcEEEEEeec-cCCccEE
Confidence 4444556778999999999999998753 59999986543 33457799999999999999999999965 4556899
Q ss_pred EEEecCCCChhhhhhccCCCCCcCHHHHHHHHHHHHHHHHHHHcCCCCCeEeeccCCCCEEeCCCCcEEEecccCccccC
Q 008707 309 VYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAE 388 (557)
Q Consensus 309 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfgla~~~~ 388 (557)
||||+++++|.+++... ...+++..++.++.|++.||+|||+ .+++||||||+||+++.++.+||+|||++....
T Consensus 97 v~e~~~~~~L~~~l~~~--~~~~~~~~~~~i~~qi~~~L~~lH~---~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~ 171 (289)
T 3og7_A 97 VTQWCEGSSLYHHLHAS--ETKFEMKKLIDIARQTARGMDYLHA---KSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKS 171 (289)
T ss_dssp EEECCCEEEHHHHHTTC-----CCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEEETTTEEEECCCC------
T ss_pred EEEecCCCcHHHHHhhc--cCCCCHHHHHHHHHHHHHHHHHHHh---CCcccccCccceEEECCCCCEEEccceeccccc
Confidence 99999999999998643 4668999999999999999999998 999999999999999999999999999997654
Q ss_pred CCC-ccccccccCCCCccCCcccC---CCCCCcccceehhHHHHHHHHhCCCCCCCCCccccccHHHHHHHHHhcCCccc
Q 008707 389 EDL-THISSVARGTVGYLDPEYYG---NQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVIS 464 (557)
Q Consensus 389 ~~~-~~~~~~~~g~~~y~aPE~l~---~~~~s~~~DvwslG~ll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 464 (557)
... ........||+.|+|||.+. +..++.++||||||+++|+|++|+.||....... .+...+..+....
T Consensus 172 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~------~~~~~~~~~~~~~ 245 (289)
T 3og7_A 172 RWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRD------QIIEMVGRGSLSP 245 (289)
T ss_dssp ------------CCCTTCCHHHHC----CCSCHHHHHHHHHHHHHHHHHSSCTTSSCCCHH------HHHHHHHHTSCCC
T ss_pred cccccccccccCCCccccCchhhcccCCCCCCcccchHHHHHHHHHHHHCCCCccccchHH------HHHHHhcccccCc
Confidence 321 12223345899999999986 5678889999999999999999999997433211 1222222332221
Q ss_pred cccccccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhhh
Q 008707 465 IVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIK 512 (557)
Q Consensus 465 ~~d~~l~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~evl~~L~~~~~ 512 (557)
.+. ......+..+.+++.+||+.+|++|||++||++.|+++.+
T Consensus 246 ~~~-----~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~l~~ 288 (289)
T 3og7_A 246 DLS-----KVRSNCPKRMKRLMAECLKKKRDERPSFPRILAEIEELAR 288 (289)
T ss_dssp CTT-----SSCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTTC
T ss_pred chh-----hccccCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHhh
Confidence 111 1112234578899999999999999999999999998754
No 104
>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*
Probab=100.00 E-value=1e-40 Score=329.73 Aligned_cols=256 Identities=24% Similarity=0.367 Sum_probs=206.4
Q ss_pred HHHHHHHHhhcccCCCCceEEEEEEEc-CCcEEEEEEccCccchhHHHHHHHHHHHhhcCCCCccceeeEEEe-------
Q 008707 231 ELEEATNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCSHRTQQFVTEVALLSRIHHRNLVPLIGYCEE------- 302 (557)
Q Consensus 231 ~~~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~------- 302 (557)
......|++.+.||+|+||.||+|.+. +++.||+|++.... +.+.+|+++++.++||||+++++++..
T Consensus 7 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~----~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 82 (284)
T 2a19_B 7 KRFGMDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNN----EKAEREVKALAKLDHVNIVHYNGCWDGFDYDPET 82 (284)
T ss_dssp HHHHHHEEEEEEEECSSSCCEEEEEETTTCCEEEEEEEECCS----GGGHHHHHHHHHCCCTTBCCEEEEEEEEEEC---
T ss_pred chhccccceeeeeccCCceEEEEEEEcCCCeEEEEEEecccc----HHHHHHHHHHHhCCCCCEEEEeeeEeccccCccc
Confidence 444566777899999999999999886 78999999986543 346689999999999999999998854
Q ss_pred ---------cCeeEEEEEecCCCChhhhhhccCCCCCcCHHHHHHHHHHHHHHHHHHHcCCCCCeEeeccCCCCEEeCCC
Q 008707 303 ---------EHQRILVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDIN 373 (557)
Q Consensus 303 ---------~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~dlk~~NIll~~~ 373 (557)
....++||||+++++|.+++... ....+++..++.++.|++.||+|||+ .+++||||||+||+++.+
T Consensus 83 ~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~i~~qi~~~l~~lH~---~~i~H~dlkp~Nil~~~~ 158 (284)
T 2a19_B 83 SSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKR-RGEKLDKVLALELFEQITKGVDYIHS---KKLINRDLKPSNIFLVDT 158 (284)
T ss_dssp ------CCEEEEEEEEECCCCSCBHHHHHHHG-GGSCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEEEET
T ss_pred ccccccccCcceEEEEEeccCCCCHHHHHhhc-cCCCCCHHHHHHHHHHHHHHHHHHHh---CCeeeccCCHHHEEEcCC
Confidence 44579999999999999999754 24568999999999999999999998 999999999999999999
Q ss_pred CcEEEecccCccccCCCCccccccccCCCCccCCcccCCCCCCcccceehhHHHHHHHHhCCCCCCCCCccccccHHHHH
Q 008707 374 MRAKVSDFGLSRQAEEDLTHISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWA 453 (557)
Q Consensus 374 ~~~kl~Dfgla~~~~~~~~~~~~~~~g~~~y~aPE~l~~~~~s~~~DvwslG~ll~elltg~~pf~~~~~~~~~~~~~~~ 453 (557)
+.+||+|||++........ .....|++.|+|||.+.+..++.++||||||+++|+|++|..|+... .. .
T Consensus 159 ~~~kl~Dfg~~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~--------~~-~ 227 (284)
T 2a19_B 159 KQVKIGDFGLVTSLKNDGK--RTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTAFET--------SK-F 227 (284)
T ss_dssp TEEEECCCTTCEESSCCSC--CCCCCSCCTTSCHHHHHCSCCCTHHHHHHHHHHHHHHHSCCSSHHHH--------HH-H
T ss_pred CCEEECcchhheecccccc--ccccCCcccccChhhhccCCCcchhhhHHHHHHHHHHHhcCCcchhH--------HH-H
Confidence 9999999999987654322 22345899999999999999999999999999999999999887411 11 1
Q ss_pred HHHHhcCCccccccccccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhhhhhcCC
Q 008707 454 RSMIKKGDVISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKIEKGG 517 (557)
Q Consensus 454 ~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~evl~~L~~~~~~~~~~ 517 (557)
...+..+.... .+ +..+.+++.+||+.||++|||+.|+++.|+.+.+.....
T Consensus 228 ~~~~~~~~~~~--------~~----~~~~~~li~~~l~~dp~~Rps~~e~l~~l~~~~~~~~~~ 279 (284)
T 2a19_B 228 FTDLRDGIISD--------IF----DKKEKTLLQKLLSKKPEDRPNTSEILRTLTVWKKSPEKN 279 (284)
T ss_dssp HHHHHTTCCCT--------TS----CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHTC-----
T ss_pred HHHhhcccccc--------cC----CHHHHHHHHHHccCChhhCcCHHHHHHHHHHHhhCCCcc
Confidence 11122222211 11 235789999999999999999999999999887754433
No 105
>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*
Probab=100.00 E-value=2.1e-41 Score=351.32 Aligned_cols=250 Identities=23% Similarity=0.329 Sum_probs=200.8
Q ss_pred HHhhcccCCCCceEEEEEEEc-CCcEEEEEEccCcc---chhHHHHHHHHHHHhhcCCCCccceeeEEEecCeeEEEEEe
Q 008707 237 NNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSC---SHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYEY 312 (557)
Q Consensus 237 ~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~lv~e~ 312 (557)
|++.+.||+|+||.||+|..+ +++.||+|++.+.. ....+.+.+|+.+++.++||||+++++++.+.+..++||||
T Consensus 71 y~~~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lV~E~ 150 (410)
T 3v8s_A 71 YEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDRYLYMVMEY 150 (410)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTCCCSTHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECC
T ss_pred cEEEEEEEcCCCEEEEEEEECCCCcEEEEEEEehhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeC
Confidence 445789999999999999886 58899999986421 12234578899999999999999999999999999999999
Q ss_pred cCCCChhhhhhccCCCCCcCHHHHHHHHHHHHHHHHHHHcCCCCCeEeeccCCCCEEeCCCCcEEEecccCccccCCCCc
Q 008707 313 MHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEEDLT 392 (557)
Q Consensus 313 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfgla~~~~~~~~ 392 (557)
++||+|.+++.. ..+++..+..++.||+.||+|||+ .+|+||||||+|||++.++.+||+|||++........
T Consensus 151 ~~gg~L~~~l~~----~~~~e~~~~~~~~qi~~aL~~LH~---~givHrDLKp~NILl~~~g~ikL~DFG~a~~~~~~~~ 223 (410)
T 3v8s_A 151 MPGGDLVNLMSN----YDVPEKWARFYTAEVVLALDAIHS---MGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGM 223 (410)
T ss_dssp CTTEEHHHHHHH----CCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTSCEEECCCTTCEECCTTSE
T ss_pred CCCCcHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHH---CCeEeccCCHHHeeECCCCCEEEeccceeEeeccCCc
Confidence 999999999873 358899999999999999999998 9999999999999999999999999999987765443
Q ss_pred cccccccCCCCccCCcccCCCC----CCcccceehhHHHHHHHHhCCCCCCCCCccccccHHHHHHHHHhcCCccccccc
Q 008707 393 HISSVARGTVGYLDPEYYGNQQ----LTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDP 468 (557)
Q Consensus 393 ~~~~~~~g~~~y~aPE~l~~~~----~s~~~DvwslG~ll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 468 (557)
.......||+.|+|||++.+.. ++.++|||||||++|||++|+.||...+... ...............+.
T Consensus 224 ~~~~~~~gt~~Y~APE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~------~~~~i~~~~~~~~~p~~ 297 (410)
T 3v8s_A 224 VRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVG------TYSKIMNHKNSLTFPDD 297 (410)
T ss_dssp EECCSCCSCGGGCCHHHHHTTTTTCEEETHHHHHHHHHHHHHHHHSSCTTCCSSHHH------HHHHHHTHHHHCCCCTT
T ss_pred ccccCCcCCccccCHHHhhccCCCcCCCCcceEecchHHHHHHHhCCCCCCCCChhh------HHHHHHhccccccCCCc
Confidence 3344567999999999997655 7899999999999999999999997543221 11111111000011000
Q ss_pred cccCCCCHHHHHHHHHHHHHccccCCCC--CCCHHHHHHH
Q 008707 469 VLIGNVKIESIWRIAEVAIQCVEQRGFS--RPKMQEIVLA 506 (557)
Q Consensus 469 ~l~~~~~~~~~~~l~~li~~cl~~~P~~--RPt~~evl~~ 506 (557)
.. ....+.+++.+||+.+|.+ ||+++||++.
T Consensus 298 ---~~----~s~~~~~li~~lL~~~~~rlgR~~~~ei~~H 330 (410)
T 3v8s_A 298 ---ND----ISKEAKNLICAFLTDREVRLGRNGVEEIKRH 330 (410)
T ss_dssp ---CC----CCHHHHHHHHHHSSCGGGCTTSSCHHHHHTS
T ss_pred ---cc----ccHHHHHHHHHHccChhhhCCCCCHHHHhcC
Confidence 01 1236889999999999988 9999999864
No 106
>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*
Probab=100.00 E-value=2.3e-40 Score=331.92 Aligned_cols=264 Identities=21% Similarity=0.308 Sum_probs=201.4
Q ss_pred HHHhhcccCCCCceEEEEEEEc-CCcEEEEEEccCc---cchhHHHHHHHHHHHhhcCCCCccceeeEEEecCeeEEEEE
Q 008707 236 TNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADS---CSHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYE 311 (557)
Q Consensus 236 ~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~lv~e 311 (557)
.|++.+.||+|+||.||+|... +|+.||+|++... .....+.+.+|+++++.++||||+++++++...+..++|||
T Consensus 33 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 112 (310)
T 2wqm_A 33 NFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVLE 112 (310)
T ss_dssp GEEEEEEEECC--CEEEEEEETTTCCEEEEEEECTTSSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred ceEEEEeecCCCCceEEEEEEcCCCceEEEEeeehhhccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCcEEEEEe
Confidence 4567899999999999999874 6899999998642 23345678899999999999999999999999999999999
Q ss_pred ecCCCChhhhhhccC-CCCCcCHHHHHHHHHHHHHHHHHHHcCCCCCeEeeccCCCCEEeCCCCcEEEecccCccccCCC
Q 008707 312 YMHNGTLRDRLHGSV-NQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEED 390 (557)
Q Consensus 312 ~~~~gsL~~~l~~~~-~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfgla~~~~~~ 390 (557)
|+++++|.+++.... ....+++..++.++.|++.||+|||+ .+++||||||+||+++.++.+||+|||++......
T Consensus 113 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~---~~i~H~dl~p~NIl~~~~~~~kl~Dfg~~~~~~~~ 189 (310)
T 2wqm_A 113 LADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHS---RRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSK 189 (310)
T ss_dssp CCCSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTSCEEECCC---------
T ss_pred cCCCCCHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHhh---CCeeCCCCcHHHEEEcCCCCEEEEeccceeeecCC
Confidence 999999999886432 34568999999999999999999998 99999999999999999999999999998876443
Q ss_pred CccccccccCCCCccCCcccCCCCCCcccceehhHHHHHHHHhCCCCCCCCCccccccHHHHHHHHHhcCCccccccccc
Q 008707 391 LTHISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPVL 470 (557)
Q Consensus 391 ~~~~~~~~~g~~~y~aPE~l~~~~~s~~~DvwslG~ll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l 470 (557)
... .....|++.|+|||.+.+..++.++||||||+++|+|++|+.||...... ..... ..+..+.......
T Consensus 190 ~~~-~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~----~~~~~-~~~~~~~~~~~~~--- 260 (310)
T 2wqm_A 190 TTA-AHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMN----LYSLC-KKIEQCDYPPLPS--- 260 (310)
T ss_dssp ----------CCSSCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTC---CC----HHHHH-HHHHTTCSCCCCT---
T ss_pred Ccc-ccccCCCeeEeChHHhCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchh----HHHHH-HHhhcccCCCCcc---
Confidence 221 22345899999999999999999999999999999999999999743221 11211 2222222211111
Q ss_pred cCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhhhhhcC
Q 008707 471 IGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKIEKG 516 (557)
Q Consensus 471 ~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~evl~~L~~~~~~~~~ 516 (557)
. ..+..+.+++.+||+.||++|||++||++.|+++......
T Consensus 261 -~----~~~~~l~~li~~~l~~dp~~Rps~~~il~~l~~l~~~~~~ 301 (310)
T 2wqm_A 261 -D----HYSEELRQLVNMCINPDPEKRPDVTYVYDVAKRMHACTAS 301 (310)
T ss_dssp -T----TSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHC-
T ss_pred -c----ccCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHHhhhh
Confidence 1 1233688999999999999999999999999999876543
No 107
>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}
Probab=100.00 E-value=1e-40 Score=346.25 Aligned_cols=271 Identities=22% Similarity=0.303 Sum_probs=213.7
Q ss_pred HHhhcccCCCCceEEEEEEEc-CCcEEEEEEccCcc-chhHHHHHHHHHHHhhcCCCCccceeeEEEecC--eeEEEEEe
Q 008707 237 NNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSC-SHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEH--QRILVYEY 312 (557)
Q Consensus 237 ~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~--~~~lv~e~ 312 (557)
|.+.+.||+|+||.||+|.+. +|+.||+|++.... ....+.+.+|++++++++||||+++++++...+ ..++||||
T Consensus 11 y~i~~~LG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~lv~e~ 90 (396)
T 4eut_A 11 WLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIMEF 90 (396)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEEECC
T ss_pred eEEEEEEEcCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCCCeEEEeeccCCCCeeEEEEec
Confidence 456789999999999999876 48999999987543 234567889999999999999999999998755 67999999
Q ss_pred cCCCChhhhhhccCCCCCcCHHHHHHHHHHHHHHHHHHHcCCCCCeEeeccCCCCEEe----CCCCcEEEecccCccccC
Q 008707 313 MHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILL----DINMRAKVSDFGLSRQAE 388 (557)
Q Consensus 313 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~dlk~~NIll----~~~~~~kl~Dfgla~~~~ 388 (557)
+++|+|.+++........+++..++.++.||+.||+|||+ .+|+||||||+|||+ +.++.+||+|||++....
T Consensus 91 ~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dlkp~NIll~~~~~~~~~~kL~DFG~a~~~~ 167 (396)
T 4eut_A 91 CPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRE---NGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELE 167 (396)
T ss_dssp CTTEEHHHHTTSGGGTTCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEEEECTTSCEEEEECCGGGCEECC
T ss_pred CCCCCHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHH---CCEEECCcCHHHEEEeecCCCceeEEEecCCCceEcc
Confidence 9999999999865444559999999999999999999998 999999999999999 777889999999998765
Q ss_pred CCCccccccccCCCCccCCcccCC--------CCCCcccceehhHHHHHHHHhCCCCCCCCCccccccHHHHHHHHHhcC
Q 008707 389 EDLTHISSVARGTVGYLDPEYYGN--------QQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKG 460 (557)
Q Consensus 389 ~~~~~~~~~~~g~~~y~aPE~l~~--------~~~s~~~DvwslG~ll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~ 460 (557)
.... .....||+.|+|||++.+ ..++.++|||||||++|||++|+.||........ ..+.....+...
T Consensus 168 ~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~--~~~~~~~~~~~~ 243 (396)
T 4eut_A 168 DDEQ--FVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRR--NKEVMYKIITGK 243 (396)
T ss_dssp CGGG--SSCSSSCCTTCCHHHHHHHCC--CHHHHHHHHHHHHHHHHHHHHHHHSSCSEECTTCTTT--CHHHHHHHHHSC
T ss_pred CCCc--cccccCCccccCHHHhhccccccccccCCCcHHHHHHHHHHHHHHHHCCCCCCCCCcccc--hHHHHHHHhcCC
Confidence 4322 223458999999999864 4677899999999999999999999974433221 112222222221
Q ss_pred Ccccc------------c--cccccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhhhhh
Q 008707 461 DVISI------------V--DPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKIE 514 (557)
Q Consensus 461 ~~~~~------------~--d~~l~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~evl~~L~~~~~~~ 514 (557)
+.... . +..............+.+++.+||+.||++||+++|+++.++++....
T Consensus 244 p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~ll~~~L~~dP~~R~s~~e~l~~l~~il~~~ 311 (396)
T 4eut_A 244 PSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDILHRM 311 (396)
T ss_dssp CTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHHHTCE
T ss_pred CcccchhheeccCCCcccCccCCcccccchHHHhhchHHHHHhhccChhhhccHHHHHHHHHHHhhce
Confidence 11000 0 001112334677788999999999999999999999999999988743
No 108
>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}
Probab=100.00 E-value=6.4e-41 Score=336.28 Aligned_cols=250 Identities=22% Similarity=0.274 Sum_probs=196.9
Q ss_pred hhHHHHHHHHhhcccCCCCceEEEEEEEc-CCcEEEEEEccCccc--hhHHHHHHHHHHHhhc-CCCCccceeeEEEecC
Q 008707 229 LPELEEATNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCS--HRTQQFVTEVALLSRI-HHRNLVPLIGYCEEEH 304 (557)
Q Consensus 229 ~~~~~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~il~~l-~h~nIv~~~~~~~~~~ 304 (557)
..++....|++.+.||+|+||+||+|.+. +|+.||||++..... .....+..|+..+..+ +||||+++++++.+.+
T Consensus 51 ~~~~~~~~y~~~~~LG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~l~~~~~~~~ 130 (311)
T 3p1a_A 51 PESFFQQSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQAWEEGG 130 (311)
T ss_dssp SSCHHHHHEEEEEEEEEETTEEEEEEEETTTSCEEEEEEESSSCCSHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETT
T ss_pred ccchhhhheeeeheeccCCCeEEEEEEECCCCeEEEEEEecccccChHHHHHHHHHHHHHHHhcCCCcEEEEEEEEEeCC
Confidence 44566677888999999999999999887 699999998765322 2334555666666665 8999999999999999
Q ss_pred eeEEEEEecCCCChhhhhhccCCCCCcCHHHHHHHHHHHHHHHHHHHcCCCCCeEeeccCCCCEEeCCCCcEEEecccCc
Q 008707 305 QRILVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLS 384 (557)
Q Consensus 305 ~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfgla 384 (557)
..++||||+ +++|.+++... ...+++..++.++.|++.||+|||+ .+|+||||||+|||++.++.+||+|||++
T Consensus 131 ~~~lv~e~~-~~~L~~~~~~~--~~~l~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dikp~NIll~~~~~~kl~DFG~a 204 (311)
T 3p1a_A 131 ILYLQTELC-GPSLQQHCEAW--GASLPEAQVWGYLRDTLLALAHLHS---QGLVHLDVKPANIFLGPRGRCKLGDFGLL 204 (311)
T ss_dssp EEEEEEECC-CCBHHHHHHHH--CSCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECGGGCEEECCCTTC
T ss_pred EEEEEEecc-CCCHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHH---CCEecCCCCHHHEEECCCCCEEEccceee
Confidence 999999999 77999888753 4569999999999999999999998 89999999999999999999999999999
Q ss_pred cccCCCCccccccccCCCCccCCcccCCCCCCcccceehhHHHHHHHHhCCCCCCCCCccccccHHHHHHHHHhcCCccc
Q 008707 385 RQAEEDLTHISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVIS 464 (557)
Q Consensus 385 ~~~~~~~~~~~~~~~g~~~y~aPE~l~~~~~s~~~DvwslG~ll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 464 (557)
........ .....||+.|+|||++.+ .++.++||||||+++|||++|..|+..... ...+..+....
T Consensus 205 ~~~~~~~~--~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~~~~~~~~----------~~~~~~~~~~~ 271 (311)
T 3p1a_A 205 VELGTAGA--GEVQEGDPRYMAPELLQG-SYGTAADVFSLGLTILEVACNMELPHGGEG----------WQQLRQGYLPP 271 (311)
T ss_dssp EECC--------CCCCCGGGCCGGGGGT-CCSTHHHHHHHHHHHHHHHHTCCCCSSHHH----------HHHHTTTCCCH
T ss_pred eecccCCC--CcccCCCccccCHhHhcC-CCCchhhHHHHHHHHHHHHhCCCCCCCccH----------HHHHhccCCCc
Confidence 87654322 233458999999999886 689999999999999999999776642211 11112221111
Q ss_pred cccccccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 008707 465 IVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 505 (557)
Q Consensus 465 ~~d~~l~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~evl~ 505 (557)
.+.. .....+.+++.+||+.||++|||++|+++
T Consensus 272 ----~~~~----~~~~~l~~li~~~L~~dP~~Rpt~~ell~ 304 (311)
T 3p1a_A 272 ----EFTA----GLSSELRSVLVMMLEPDPKLRATAEALLA 304 (311)
T ss_dssp ----HHHT----TSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred ----cccc----CCCHHHHHHHHHHcCCChhhCcCHHHHHh
Confidence 1111 12347889999999999999999999985
No 109
>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A
Probab=100.00 E-value=6.1e-40 Score=326.31 Aligned_cols=263 Identities=23% Similarity=0.305 Sum_probs=207.7
Q ss_pred HHhhcccCCCCceEEEEEEE-cCCcEEEEEEccCccchhHHHHHHHHHHHhhcCCCCccceeeEE-EecCeeEEEEEecC
Q 008707 237 NNFCKKIGKGSFGSVYYGKM-KDGKEVAVKIMADSCSHRTQQFVTEVALLSRIHHRNLVPLIGYC-EEEHQRILVYEYMH 314 (557)
Q Consensus 237 ~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~-~~~~~~~lv~e~~~ 314 (557)
|++.+.||+|+||.||+|.. .+++.||+|++..... .+.+.+|+++++.++|++++..+.++ ...+..++||||+
T Consensus 11 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e~~- 87 (296)
T 3uzp_A 11 YRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK--HPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVMELL- 87 (296)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTTEEEEEEEEESCSS--CCHHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEEECC-
T ss_pred EEEEEEEccCCCeEEEEEEEcCCCcEEEEEEecCCcc--hhHHHHHHHHHHHhhcCCCCCccccccCCCCceEEEEEec-
Confidence 45678999999999999987 5689999999865432 34688999999999988877776665 5567789999999
Q ss_pred CCChhhhhhccCCCCCcCHHHHHHHHHHHHHHHHHHHcCCCCCeEeeccCCCCEEeC---CCCcEEEecccCccccCCCC
Q 008707 315 NGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLD---INMRAKVSDFGLSRQAEEDL 391 (557)
Q Consensus 315 ~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~dlk~~NIll~---~~~~~kl~Dfgla~~~~~~~ 391 (557)
+++|.+++... ...+++..++.++.|++.||+|||+ ++++||||||+||+++ .++.+||+|||++.......
T Consensus 88 ~~~L~~~~~~~--~~~~~~~~~~~i~~qi~~~l~~lH~---~~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~~~~~~ 162 (296)
T 3uzp_A 88 GPSLEDLFNFC--SRKFSLKTVLLLADQMISRIEYIHS---KNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDAR 162 (296)
T ss_dssp CCBHHHHHHHT--TTCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGGGEEECCGGGTTCEEECCCTTCEECBCTT
T ss_pred CCCHHHHHHhh--ccCCCHHHHHHHHHHHHHHHHHHHh---CCeeeCCCCHHHeEEecCCCCCeEEEeeCCCcccccccc
Confidence 99999999743 4568999999999999999999998 9999999999999994 78899999999998765433
Q ss_pred cc------ccccccCCCCccCCcccCCCCCCcccceehhHHHHHHHHhCCCCCCCCCccccccHHHHHHHHHhcCCcccc
Q 008707 392 TH------ISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISI 465 (557)
Q Consensus 392 ~~------~~~~~~g~~~y~aPE~l~~~~~s~~~DvwslG~ll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 465 (557)
.. ......||+.|+|||.+.+..++.++||||||+++|+|++|+.||..............+..........
T Consensus 163 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~-- 240 (296)
T 3uzp_A 163 THQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIE-- 240 (296)
T ss_dssp TCCBCCCCCSCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHHHHHSCHH--
T ss_pred cccccccccccccccccccCChhhhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCcCchhhhhhhhhhcccccCCchH--
Confidence 21 1234468999999999999999999999999999999999999998654433333332222211111110
Q ss_pred ccccccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhhhhhcC
Q 008707 466 VDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKIEKG 516 (557)
Q Consensus 466 ~d~~l~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~evl~~L~~~~~~~~~ 516 (557)
.+...+ +..+.+++.+||+.||++|||++||++.|+++......
T Consensus 241 ---~~~~~~----~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~~~~ 284 (296)
T 3uzp_A 241 ---VLCKGY----PSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGF 284 (296)
T ss_dssp ---HHTTTS----CHHHHHHHHHHHTSCTTCCCCHHHHHHHHHHHHHHTTC
T ss_pred ---HHHhhC----CHHHHHHHHHHHhcCcCcCCCHHHHHHHHHHHHHhcCC
Confidence 011111 24688999999999999999999999999999876543
No 110
>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*
Probab=100.00 E-value=1.8e-40 Score=333.84 Aligned_cols=262 Identities=21% Similarity=0.308 Sum_probs=190.2
Q ss_pred HHHhhcccCCCCceEEEEEEEc-CCcEEEEEEccCcc-chhHHHHHHHHHHHhhcCCCCccceeeEEEecCeeEEEEEec
Q 008707 236 TNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSC-SHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYEYM 313 (557)
Q Consensus 236 ~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~lv~e~~ 313 (557)
.|++.+.||+|+||.||+|... +|+.||+|++.... ....+.+.+|+++++.++||||+++++++.+++..++||||+
T Consensus 6 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~ 85 (317)
T 2pmi_A 6 QFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIVRLYDVIHTENKLTLVFEFM 85 (317)
T ss_dssp -------------CEEEEEECSSSCCEEEEEEEECCSTTCSCHHHHHHHHHHTTCCBTTBCCEEEEECCTTEEEEEEECC
T ss_pred ceeEeeEECCCCCEEEEEEEECCCCcEEEEEEeecccccccHHHHHHHHHHHHhcCCCCcceEEEEEEECCeEEEEEEec
Confidence 4667899999999999999875 58999999986543 223467889999999999999999999999999999999999
Q ss_pred CCCChhhhhhccC---CCCCcCHHHHHHHHHHHHHHHHHHHcCCCCCeEeeccCCCCEEeCCCCcEEEecccCccccCCC
Q 008707 314 HNGTLRDRLHGSV---NQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEED 390 (557)
Q Consensus 314 ~~gsL~~~l~~~~---~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfgla~~~~~~ 390 (557)
+ |+|.+++.... ....+++..+..++.||+.||+|||+ .||+||||||+||+++.++.+||+|||++......
T Consensus 86 ~-~~L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~---~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~ 161 (317)
T 2pmi_A 86 D-NDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHE---NKILHRDLKPQNLLINKRGQLKLGDFGLARAFGIP 161 (317)
T ss_dssp C-CBHHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTCCEEECCCSSCEETTSC
T ss_pred C-CCHHHHHHhccccccccCCCHHHHHHHHHHHHHHHHHHHH---CCeeeCCCChHHeEEcCCCCEEECcCccceecCCC
Confidence 7 69998886432 23458999999999999999999998 99999999999999999999999999999876533
Q ss_pred CccccccccCCCCccCCcccCC-CCCCcccceehhHHHHHHHHhCCCCCCCCCccccccHHHHHHHHHhcCCcc------
Q 008707 391 LTHISSVARGTVGYLDPEYYGN-QQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVI------ 463 (557)
Q Consensus 391 ~~~~~~~~~g~~~y~aPE~l~~-~~~s~~~DvwslG~ll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~------ 463 (557)
... .....||+.|+|||++.+ ..++.++|||||||++|+|++|+.||.+.+.... ...+..........
T Consensus 162 ~~~-~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~---~~~i~~~~~~~~~~~~~~~~ 237 (317)
T 2pmi_A 162 VNT-FSSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDEEQ---LKLIFDIMGTPNESLWPSVT 237 (317)
T ss_dssp CCC-CCCCCSCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHH---HHHHHHHHCSCCTTTCGGGG
T ss_pred ccc-CCCCcccccccCchHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHH---HHHHHHHhCCCChhHhhhhh
Confidence 222 223458999999999976 4689999999999999999999999985443221 11111111110000
Q ss_pred --cccccccc------------CCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 008707 464 --SIVDPVLI------------GNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 505 (557)
Q Consensus 464 --~~~d~~l~------------~~~~~~~~~~l~~li~~cl~~~P~~RPt~~evl~ 505 (557)
..+.+.+. ..........+.+++.+||+.||++|||++|+++
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e~l~ 293 (317)
T 2pmi_A 238 KLPKYNPNIQQRPPRDLRQVLQPHTKEPLDGNLMDFLHGLLQLNPDMRLSAKQALH 293 (317)
T ss_dssp GCTTCCTTCCCCCCCCSHHHHGGGCSSCCCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred hhhhcccccccccchhHHHhhcccccccCCHHHHHHHHHHCCCCcccCCCHHHHhC
Confidence 00000000 0000112346889999999999999999999986
No 111
>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7
Probab=100.00 E-value=5.4e-42 Score=368.98 Aligned_cols=258 Identities=27% Similarity=0.432 Sum_probs=210.5
Q ss_pred HHHHHhhcccCCCCceEEEEEEEcCCcEEEEEEccCccchhHHHHHHHHHHHhhcCCCCccceeeEEEecCeeEEEEEec
Q 008707 234 EATNNFCKKIGKGSFGSVYYGKMKDGKEVAVKIMADSCSHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYEYM 313 (557)
Q Consensus 234 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~lv~e~~ 313 (557)
...+++.+.||+|+||.||+|.++++..||||+++... ...+.|.+|+++|++++||||+++++++.+ +..++||||+
T Consensus 266 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~~~~~~~~-~~~~lv~e~~ 343 (535)
T 2h8h_A 266 RESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYM 343 (535)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTEEEEEEEECTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEECCC
T ss_pred hhhhhhheecccCCCeEEEEEEECCCceEEEEEeCCCC-CCHHHHHHHHHHHHhCCCCCEeeEEEEEee-ccceEeeehh
Confidence 34456788999999999999999988899999987543 235679999999999999999999999876 6789999999
Q ss_pred CCCChhhhhhccCCCCCcCHHHHHHHHHHHHHHHHHHHcCCCCCeEeeccCCCCEEeCCCCcEEEecccCccccCCCCcc
Q 008707 314 HNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEEDLTH 393 (557)
Q Consensus 314 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfgla~~~~~~~~~ 393 (557)
++|+|.+++... ....+++..++.++.||+.||+|||+ ++|+||||||+|||++.++.+||+|||+++........
T Consensus 344 ~~gsL~~~l~~~-~~~~l~~~~~~~i~~qi~~~L~~LH~---~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~ 419 (535)
T 2h8h_A 344 SKGSLLDFLKGE-TGKYLRLPQLVDMAAQIASGMAYVER---MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYT 419 (535)
T ss_dssp TTEEHHHHHSHH-HHTTCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEECGGGCEEECCTTSTTTCCCHHHH
T ss_pred cCCcHHHHHhhc-CCCCCCHHHHHHHHHHHHHHHHHHHh---CCeeCCCCCHhhEEEcCCCcEEEcccccceecCCCcee
Confidence 999999999743 23458899999999999999999998 99999999999999999999999999999876543222
Q ss_pred ccccccCCCCccCCcccCCCCCCcccceehhHHHHHHHHh-CCCCCCCCCccccccHHHHHHHHHhcCCccccccccccC
Q 008707 394 ISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELIS-GKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPVLIG 472 (557)
Q Consensus 394 ~~~~~~g~~~y~aPE~l~~~~~s~~~DvwslG~ll~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~ 472 (557)
......++..|+|||.+.+..++.++||||||+++|||+| |+.||.+.... + +...+..+....
T Consensus 420 ~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t~g~~P~~~~~~~------~-~~~~i~~~~~~~-------- 484 (535)
T 2h8h_A 420 ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNR------E-VLDQVERGYRMP-------- 484 (535)
T ss_dssp TTCSTTSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTTCCSSTTCCHH------H-HHHHHHTTCCCC--------
T ss_pred cccCCcCcccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHH------H-HHHHHHcCCCCC--------
Confidence 2233446788999999998899999999999999999999 99999743321 1 122223332111
Q ss_pred CCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhhhh
Q 008707 473 NVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKI 513 (557)
Q Consensus 473 ~~~~~~~~~l~~li~~cl~~~P~~RPt~~evl~~L~~~~~~ 513 (557)
.+...+..+.+++.+||+.||++|||+++|++.|+++...
T Consensus 485 -~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~L~~~~~~ 524 (535)
T 2h8h_A 485 -CPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTS 524 (535)
T ss_dssp -CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSSCC
T ss_pred -CCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHhhc
Confidence 1112234788999999999999999999999999987654
No 112
>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*
Probab=100.00 E-value=1.7e-40 Score=327.29 Aligned_cols=249 Identities=20% Similarity=0.267 Sum_probs=203.2
Q ss_pred HHHHhhcccCCCCceEEEEEEEc-CCcEEEEEEccCccchhHHHHHHHHHHHhhcCCCCccceeeEEEecCeeEEEEEec
Q 008707 235 ATNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCSHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYEYM 313 (557)
Q Consensus 235 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~lv~e~~ 313 (557)
..|++.+.||+|+||.||+|... ++..||+|++........+.+.+|+++++.++||||+++++++.+.+..++||||+
T Consensus 9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 88 (277)
T 3f3z_A 9 QYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYETFEDNTDIYLVMELC 88 (277)
T ss_dssp HHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEECC
T ss_pred hhEEeeeEEeecCCEEEEEEEeCCCCcEEEEEeehhhccchHHHHHHHHHHHHhCCCCCEeeEEEEEecCCeEEEEEecc
Confidence 45677899999999999999876 47789999987665556778999999999999999999999999999999999999
Q ss_pred CCCChhhhhhccCCCCCcCHHHHHHHHHHHHHHHHHHHcCCCCCeEeeccCCCCEEe---CCCCcEEEecccCccccCCC
Q 008707 314 HNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILL---DINMRAKVSDFGLSRQAEED 390 (557)
Q Consensus 314 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~dlk~~NIll---~~~~~~kl~Dfgla~~~~~~ 390 (557)
++++|.+++.. ...+++..+..++.|++.||+|||+ .+++||||||+||++ +.++.++|+|||++......
T Consensus 89 ~~~~L~~~~~~---~~~~~~~~~~~i~~~i~~~l~~lH~---~~i~H~dlkp~Nil~~~~~~~~~~~l~Dfg~~~~~~~~ 162 (277)
T 3f3z_A 89 TGGELFERVVH---KRVFRESDAARIMKDVLSAVAYCHK---LNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPG 162 (277)
T ss_dssp CSCBHHHHHHH---HCSCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEESSSSTTCCEEECCCTTCEECCTT
T ss_pred CCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHH---CCccCCCCCHHHEEEecCCCCCcEEEEecccceeccCc
Confidence 99999998874 3568999999999999999999998 999999999999999 78899999999999876543
Q ss_pred CccccccccCCCCccCCcccCCCCCCcccceehhHHHHHHHHhCCCCCCCCCccccccHHHHHHHHHhcCCccccccccc
Q 008707 391 LTHISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPVL 470 (557)
Q Consensus 391 ~~~~~~~~~g~~~y~aPE~l~~~~~s~~~DvwslG~ll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l 470 (557)
.. .....||+.|+|||.+.+. ++.++||||||+++|+|++|+.||....... ....+..+..... ...
T Consensus 163 ~~--~~~~~~t~~y~aPE~~~~~-~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~-------~~~~~~~~~~~~~--~~~ 230 (277)
T 3f3z_A 163 KM--MRTKVGTPYYVSPQVLEGL-YGPECDEWSAGVMMYVLLCGYPPFSAPTDSE-------VMLKIREGTFTFP--EKD 230 (277)
T ss_dssp SC--BCCCCSCTTTCCHHHHTTC-BCTTHHHHHHHHHHHHHHHSSCSSCCSSHHH-------HHHHHHHCCCCCC--HHH
T ss_pred cc--hhccCCCCCccChHHhccc-CCchhhehhHHHHHHHHHHCCCCCCCCCHHH-------HHHHHHhCCCCCC--chh
Confidence 32 2334589999999998765 8999999999999999999999997543211 1111222211100 000
Q ss_pred cCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 008707 471 IGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 505 (557)
Q Consensus 471 ~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~evl~ 505 (557)
.. ..+..+.+++.+|++.||++|||+.|+++
T Consensus 231 ~~----~~~~~~~~li~~~l~~dp~~R~s~~~~l~ 261 (277)
T 3f3z_A 231 WL----NVSPQAESLIRRLLTKSPKQRITSLQALE 261 (277)
T ss_dssp HT----TSCHHHHHHHHHHTCSSTTTSCCHHHHTT
T ss_pred hh----cCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 00 12347889999999999999999999986
No 113
>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}
Probab=100.00 E-value=5.6e-41 Score=339.95 Aligned_cols=258 Identities=21% Similarity=0.276 Sum_probs=191.5
Q ss_pred HHHHhhcccCCCCceEEEEEEEc-CCcEEEEEEccCccchhHHHHHHHHHHHhhcC-CCCccceeeEEE--------ecC
Q 008707 235 ATNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCSHRTQQFVTEVALLSRIH-HRNLVPLIGYCE--------EEH 304 (557)
Q Consensus 235 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~il~~l~-h~nIv~~~~~~~--------~~~ 304 (557)
..|++.+.||+|+||.||+|.+. +++.||+|++........+.+.+|+.+++++. ||||+++++++. ...
T Consensus 28 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~~h~~iv~~~~~~~~~~~~~~~~~~ 107 (337)
T 3ll6_A 28 LRLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESDTGQA 107 (337)
T ss_dssp EEEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHHHTTSTTBCCEEEEEEECTTTSTTSSE
T ss_pred ceEEEEEEEccCCceEEEEEEECCCCcEEEEEEecCCchHHHHHHHHHHHHHHHhccCCChhhccccccccccccccCCc
Confidence 35567899999999999999875 68999999987665666678999999999996 999999999984 344
Q ss_pred eeEEEEEecCCCChhhhhhccCCCCCcCHHHHHHHHHHHHHHHHHHHcCCCCC--eEeeccCCCCEEeCCCCcEEEeccc
Q 008707 305 QRILVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPG--IIHRDVKSSNILLDINMRAKVSDFG 382 (557)
Q Consensus 305 ~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~--ivH~dlk~~NIll~~~~~~kl~Dfg 382 (557)
..++||||+. |+|.+++........+++..++.++.||+.||+|||+ .+ ++||||||+|||++.++.+||+|||
T Consensus 108 ~~~lv~e~~~-g~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~---~~~~ivH~Dikp~NIl~~~~~~~kl~Dfg 183 (337)
T 3ll6_A 108 EFLLLTELCK-GQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMHR---QKPPIIHRDLKVENLLLSNQGTIKLCDFG 183 (337)
T ss_dssp EEEEEEECCS-EEHHHHHHHHHTTCSCCHHHHHHHHHHHHHHHHHHHT---SSSCCBCCCCCGGGCEECTTSCEEBCCCT
T ss_pred eEEEEEEecC-CCHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHh---CCCCEEEccCCcccEEECCCCCEEEecCc
Confidence 5789999995 7999988764455679999999999999999999998 78 9999999999999999999999999
Q ss_pred CccccCCCCccc-----------cccccCCCCccCCccc---CCCCCCcccceehhHHHHHHHHhCCCCCCCCCcccccc
Q 008707 383 LSRQAEEDLTHI-----------SSVARGTVGYLDPEYY---GNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELN 448 (557)
Q Consensus 383 la~~~~~~~~~~-----------~~~~~g~~~y~aPE~l---~~~~~s~~~DvwslG~ll~elltg~~pf~~~~~~~~~~ 448 (557)
++.......... .....||+.|+|||.+ .+..++.++||||||+++|+|++|+.||.......
T Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~--- 260 (337)
T 3ll6_A 184 SATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFEDGAKLR--- 260 (337)
T ss_dssp TCBCCSSCC-------------------------------CCTTSCSSHHHHHHHHHHHHHHHHHSSCCC----------
T ss_pred cceeccccCcccccccccccchhhccccCCCCcCChhhhhccccCCCChHHhHHHHHHHHHHHHhCCCCCcchhHHH---
Confidence 998765432211 1133589999999998 56678999999999999999999999997432211
Q ss_pred HHHHHHHHHhcCCccccccccccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhhhhhc
Q 008707 449 IVHWARSMIKKGDVISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKIEK 515 (557)
Q Consensus 449 ~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~evl~~L~~~~~~~~ 515 (557)
... +..... ........+.+++.+||+.||++|||++|+++.|+++.....
T Consensus 261 ---~~~-----~~~~~~--------~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~~~~~~~~ 311 (337)
T 3ll6_A 261 ---IVN-----GKYSIP--------PHDTQYTVFHSLIRAMLQVNPEERLSIAEVVHQLQEIAAARN 311 (337)
T ss_dssp -------------CCCC--------TTCCSSGGGHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHHTT
T ss_pred ---hhc-----CcccCC--------cccccchHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhccC
Confidence 000 000000 000111247799999999999999999999999999987544
No 114
>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}
Probab=100.00 E-value=6.4e-41 Score=336.99 Aligned_cols=263 Identities=22% Similarity=0.315 Sum_probs=204.6
Q ss_pred HHHHhhcccCCCCceEEEEEEE-cCCcEEEEEEccCccchhHHHHHHHHHHHhhcCCCCccceeeEEE----ecCeeEEE
Q 008707 235 ATNNFCKKIGKGSFGSVYYGKM-KDGKEVAVKIMADSCSHRTQQFVTEVALLSRIHHRNLVPLIGYCE----EEHQRILV 309 (557)
Q Consensus 235 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~----~~~~~~lv 309 (557)
..|++.+.||+|+||.||++.. .+++.||+|++........+.+.+|+++++.++||||+++++++. .....++|
T Consensus 29 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~lv 108 (317)
T 2buj_A 29 KHYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLVAYCLRERGAKHEAWLL 108 (317)
T ss_dssp EEEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEEEETTEEEEEEE
T ss_pred eEEEEEEEecCCCCeEEEEEEecCCCcEEEEEEEecCCHHHHHHHHHHHHHHhhcCCCCeeeEEEEEEeccCCCceeEEE
Confidence 3456689999999999999987 468999999987655566778999999999999999999999986 34478899
Q ss_pred EEecCCCChhhhhhccC-CCCCcCHHHHHHHHHHHHHHHHHHHcCCCCCeEeeccCCCCEEeCCCCcEEEecccCccccC
Q 008707 310 YEYMHNGTLRDRLHGSV-NQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAE 388 (557)
Q Consensus 310 ~e~~~~gsL~~~l~~~~-~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfgla~~~~ 388 (557)
|||+++|+|.+++.... ....+++..++.++.|+++||+|||+ .+++||||||+||+++.++.+||+|||++....
T Consensus 109 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~---~~ivH~dlkp~NIl~~~~~~~kl~dfg~~~~~~ 185 (317)
T 2buj_A 109 LPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHA---KGYAHRDLKPTNILLGDEGQPVLMDLGSMNQAC 185 (317)
T ss_dssp EECCTTCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTSCEEECCCSSCEESC
T ss_pred EEeCCCCcHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCCHHHEEEcCCCCEEEEecCcchhcc
Confidence 99999999999887532 34678999999999999999999998 899999999999999999999999999987653
Q ss_pred CCCccc--------cccccCCCCccCCcccCCCC---CCcccceehhHHHHHHHHhCCCCCCCCCccccccHHHHHHHHH
Q 008707 389 EDLTHI--------SSVARGTVGYLDPEYYGNQQ---LTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMI 457 (557)
Q Consensus 389 ~~~~~~--------~~~~~g~~~y~aPE~l~~~~---~s~~~DvwslG~ll~elltg~~pf~~~~~~~~~~~~~~~~~~~ 457 (557)
...... .....|++.|+|||.+.+.. ++.++||||||+++|+|++|+.||....... ...... .
T Consensus 186 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~-~~~~~~----~ 260 (317)
T 2buj_A 186 IHVEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKG-DSVALA----V 260 (317)
T ss_dssp EEEESHHHHHHHHHHHHHHSCGGGCCGGGSSCCSEEEECTHHHHHHHHHHHHHHHHSSCTTHHHHHTT-SCHHHH----H
T ss_pred cccccccccccccccccccCCcccCCHhHhccCCCcCCCchhhHHHHHHHHHHHHhCCCChhhhhccc-chhhHH----h
Confidence 221110 11234799999999987654 6889999999999999999999996321111 111111 1
Q ss_pred hcCCccccccccccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhhhhh
Q 008707 458 KKGDVISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKIE 514 (557)
Q Consensus 458 ~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~evl~~L~~~~~~~ 514 (557)
... . .. ......+..+.+++.+||+.||.+|||++||++.|+.+....
T Consensus 261 ~~~-~-~~-------~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~~~~~~ 308 (317)
T 2buj_A 261 QNQ-L-SI-------PQSPRHSSALWQLLNSMMTVDPHQRPHIPLLLSQLEALQPPA 308 (317)
T ss_dssp HCC----C-------CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTCCCC
T ss_pred hcc-C-CC-------CccccCCHHHHHHHHHHhhcChhhCCCHHHHHHHhhhcCCCC
Confidence 110 0 00 001112347889999999999999999999999999876543
No 115
>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*
Probab=100.00 E-value=5.3e-41 Score=339.00 Aligned_cols=256 Identities=24% Similarity=0.408 Sum_probs=201.5
Q ss_pred HHHhhcccCCCCceEEEEEEEc-CCcE----EEEEEccCcc-chhHHHHHHHHHHHhhcCCCCccceeeEEEecCeeEEE
Q 008707 236 TNNFCKKIGKGSFGSVYYGKMK-DGKE----VAVKIMADSC-SHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILV 309 (557)
Q Consensus 236 ~~~~~~~lG~G~~g~Vy~~~~~-~~~~----vavK~~~~~~-~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~lv 309 (557)
.|++.+.||+|+||.||+|.+. +++. ||+|.+.... ....+.+.+|+.+++.++||||+++++++. ++..++|
T Consensus 14 ~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~~v 92 (325)
T 3kex_A 14 ELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRLLGLCP-GSSLQLV 92 (325)
T ss_dssp TEEEEEEEECCSSCEEEEEEECCTTCSCCEEEEEEEECCTTSCSCBCSCCHHHHHHHTCCCTTBCCEEEEEC-BSSEEEE
T ss_pred HceeeeeeeecCCceEEEEEEcCCCceEEEEEEEEeccccccHHHHHHHHHHHHHHhcCCCCCcCeEEEEEc-CCccEEE
Confidence 3456789999999999999875 3443 7888775432 223356778999999999999999999986 4568899
Q ss_pred EEecCCCChhhhhhccCCCCCcCHHHHHHHHHHHHHHHHHHHcCCCCCeEeeccCCCCEEeCCCCcEEEecccCccccCC
Q 008707 310 YEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEE 389 (557)
Q Consensus 310 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfgla~~~~~ 389 (557)
|||+.+|+|.+++... ...+++..++.++.||+.||+|||+ .+|+||||||+|||++.++.+||+|||+++....
T Consensus 93 ~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~~ 167 (325)
T 3kex_A 93 TQYLPLGSLLDHVRQH--RGALGPQLLLNWGVQIAKGMYYLEE---HGMVHRNLAARNVLLKSPSQVQVADFGVADLLPP 167 (325)
T ss_dssp EECCTTCBSHHHHHSS--GGGSCTTHHHHHHHHHHHHHHHHHH---TTCCCSCCSSTTEEESSSSCEEECSCSGGGGSCC
T ss_pred EEeCCCCCHHHHHHHc--cccCCHHHHHHHHHHHHHHHHHHHh---CCCCCCccchheEEECCCCeEEECCCCcccccCc
Confidence 9999999999999743 3568888999999999999999998 9999999999999999999999999999987654
Q ss_pred CCc-cccccccCCCCccCCcccCCCCCCcccceehhHHHHHHHHh-CCCCCCCCCccccccHHHHHHHHHhcCCcccccc
Q 008707 390 DLT-HISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELIS-GKKPVSVEDFGAELNIVHWARSMIKKGDVISIVD 467 (557)
Q Consensus 390 ~~~-~~~~~~~g~~~y~aPE~l~~~~~s~~~DvwslG~ll~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 467 (557)
... .......+++.|+|||.+.+..++.++||||||+++|+|+| |+.||....... . ...+..+.......
T Consensus 168 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~---~----~~~~~~~~~~~~~~ 240 (325)
T 3kex_A 168 DDKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLAE---V----PDLLEKGERLAQPQ 240 (325)
T ss_dssp CTTCCC-----CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCTTH---H----HHHHHTTCBCCCCT
T ss_pred ccccccccCCCCcccccChHHhccCCCChhhHhHHhHHHHHHHHhCCCCCccccCHHH---H----HHHHHcCCCCCCCC
Confidence 332 22234457889999999998899999999999999999999 999998543322 1 12222222111111
Q ss_pred ccccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhhhh
Q 008707 468 PVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKI 513 (557)
Q Consensus 468 ~~l~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~evl~~L~~~~~~ 513 (557)
..+..+.+++.+||+.||++|||++||++.|+.+...
T Consensus 241 ---------~~~~~~~~li~~~l~~dp~~Rps~~el~~~l~~~~~~ 277 (325)
T 3kex_A 241 ---------ICTIDVYMVMVKCWMIDENIRPTFKELANEFTRMARD 277 (325)
T ss_dssp ---------TBCTTTTHHHHHHTCSCTTTSCCHHHHHHHHHHHTTS
T ss_pred ---------cCcHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhc
Confidence 1122567999999999999999999999999998764
No 116
>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...
Probab=100.00 E-value=1.1e-40 Score=332.21 Aligned_cols=259 Identities=30% Similarity=0.459 Sum_probs=202.9
Q ss_pred HHhhcccCCCCceEEEEEEEcC----CcEEEEEEccCcc-chhHHHHHHHHHHHhhcCCCCccceeeEEE-ecCeeEEEE
Q 008707 237 NNFCKKIGKGSFGSVYYGKMKD----GKEVAVKIMADSC-SHRTQQFVTEVALLSRIHHRNLVPLIGYCE-EEHQRILVY 310 (557)
Q Consensus 237 ~~~~~~lG~G~~g~Vy~~~~~~----~~~vavK~~~~~~-~~~~~~~~~E~~il~~l~h~nIv~~~~~~~-~~~~~~lv~ 310 (557)
|++.+.||+|+||.||+|.+.+ ...||+|.+.... ....+.+.+|+.++++++||||+++++++. .++..++||
T Consensus 27 y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~v~ 106 (298)
T 3f66_A 27 VHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVL 106 (298)
T ss_dssp EEEEEEEEEETTEEEEEEEEC-----CEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEEEE
T ss_pred hhhcceeeecCCceEEEEEEecCCCceeEEEEEecccCCCHHHHHHHHHHHHHHHhCCCCCEeeeeeEEEcCCCceEEEE
Confidence 4457899999999999998653 2368999887543 334577899999999999999999999864 556789999
Q ss_pred EecCCCChhhhhhccCCCCCcCHHHHHHHHHHHHHHHHHHHcCCCCCeEeeccCCCCEEeCCCCcEEEecccCccccCCC
Q 008707 311 EYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEED 390 (557)
Q Consensus 311 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfgla~~~~~~ 390 (557)
||+++|+|.+++.. ....+++..++.++.|++.||+|||+ .+++||||||+||+++.++.+||+|||++......
T Consensus 107 e~~~~~~L~~~l~~--~~~~~~~~~~~~i~~ql~~~l~~lH~---~~i~H~dikp~Nil~~~~~~~kl~Dfg~a~~~~~~ 181 (298)
T 3f66_A 107 PYMKHGDLRNFIRN--ETHNPTVKDLIGFGLQVAKGMKYLAS---KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDK 181 (298)
T ss_dssp ECCTTCBHHHHHHC--TTCCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEECTTCCEEECSCGGGCCCSCG
T ss_pred eCCCCCCHHHHHHh--cccCCCHHHHHHHHHHHHHHHHHHHh---CCccCCCCchheEEECCCCCEEECccccccccccc
Confidence 99999999999974 34568899999999999999999998 99999999999999999999999999999876443
Q ss_pred Cc---cccccccCCCCccCCcccCCCCCCcccceehhHHHHHHHHh-CCCCCCCCCccccccHHHHHHHHHhcCCccccc
Q 008707 391 LT---HISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELIS-GKKPVSVEDFGAELNIVHWARSMIKKGDVISIV 466 (557)
Q Consensus 391 ~~---~~~~~~~g~~~y~aPE~l~~~~~s~~~DvwslG~ll~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 466 (557)
.. .......+|+.|+|||.+.+..++.++||||||+++|+|++ +.+||....... ... .+..+....
T Consensus 182 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~~~~---~~~----~~~~~~~~~-- 252 (298)
T 3f66_A 182 EYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFD---ITV----YLLQGRRLL-- 252 (298)
T ss_dssp GGCBC-----CCBCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTSCTTT---HHH----HHHTTCCCC--
T ss_pred chhccccccCCCCCccccChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCccCCHHH---HHH----HHhcCCCCC--
Confidence 21 11223447788999999999899999999999999999999 556665332221 111 111121110
Q ss_pred cccccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhhhhhcC
Q 008707 467 DPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKIEKG 516 (557)
Q Consensus 467 d~~l~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~evl~~L~~~~~~~~~ 516 (557)
. +...+..+.+++.+||+.+|++|||++|+++.|+++......
T Consensus 253 ~-------~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~~~~~~~~ 295 (298)
T 3f66_A 253 Q-------PEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFIG 295 (298)
T ss_dssp C-------CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHTSCC
T ss_pred C-------CccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhhcc
Confidence 0 111234688999999999999999999999999999875443
No 117
>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}
Probab=100.00 E-value=4.9e-41 Score=339.53 Aligned_cols=257 Identities=23% Similarity=0.406 Sum_probs=199.8
Q ss_pred HHHHhhcccCCCCceEEEEEEEc-CCcE----EEEEEccCc-cchhHHHHHHHHHHHhhcCCCCccceeeEEEecCeeEE
Q 008707 235 ATNNFCKKIGKGSFGSVYYGKMK-DGKE----VAVKIMADS-CSHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRIL 308 (557)
Q Consensus 235 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~----vavK~~~~~-~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~l 308 (557)
..|++.+.||+|+||.||+|.+. +++. ||+|.+... .....+.+.+|+.+++.++||||+++++++.... .++
T Consensus 15 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~iK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~-~~~ 93 (327)
T 3lzb_A 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQL 93 (327)
T ss_dssp TTEEEEEEEEECSSEEEEEEEECCTTCSCCEEEEEEEECCCSSCCCHHHHHHHHHHHTTCCBTTBCCCCEEEESSS-EEE
T ss_pred hHceEEEEeeeCCCeEEEEEEEcCCCceEEEEEEEEeeccccCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEecCC-ceE
Confidence 34556799999999999999865 3443 577776543 2345678999999999999999999999998765 789
Q ss_pred EEEecCCCChhhhhhccCCCCCcCHHHHHHHHHHHHHHHHHHHcCCCCCeEeeccCCCCEEeCCCCcEEEecccCccccC
Q 008707 309 VYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAE 388 (557)
Q Consensus 309 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfgla~~~~ 388 (557)
|+|++.+|+|.+++... ...+++..++.++.|++.||+|||+ .+|+||||||+|||++.++.+||+|||++....
T Consensus 94 v~~~~~~g~L~~~l~~~--~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dikp~NIl~~~~~~~kL~DfG~a~~~~ 168 (327)
T 3lzb_A 94 ITQLMPFGCLLDYVREH--KDNIGSQYLLNWCVQIAKGMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLG 168 (327)
T ss_dssp EECCCSSCBHHHHHHHT--TTCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEEEETTEEEECCTTC-----
T ss_pred EEEecCCCcHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHhh---CCCcCCCCCHHHEEEcCCCCEEEccCcceeEcc
Confidence 99999999999999753 4568999999999999999999998 999999999999999999999999999998764
Q ss_pred CCCc-cccccccCCCCccCCcccCCCCCCcccceehhHHHHHHHHh-CCCCCCCCCccccccHHHHHHHHHhcCCccccc
Q 008707 389 EDLT-HISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELIS-GKKPVSVEDFGAELNIVHWARSMIKKGDVISIV 466 (557)
Q Consensus 389 ~~~~-~~~~~~~g~~~y~aPE~l~~~~~s~~~DvwslG~ll~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 466 (557)
.... .......+|+.|+|||.+.+..++.++||||||+++|||++ |+.||....... +. ..+..+....
T Consensus 169 ~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~---~~----~~~~~~~~~~-- 239 (327)
T 3lzb_A 169 AEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE---IS----SILEKGERLP-- 239 (327)
T ss_dssp -----------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGG---HH----HHHHTTCCCC--
T ss_pred CccccccccCCCccccccCHHHHcCCCCChHHHHHHHHHHHHHHHHCCCCCCCCCCHHH---HH----HHHHcCCCCC--
Confidence 4322 12223346788999999999999999999999999999999 999998544332 11 1222222111
Q ss_pred cccccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhhhh
Q 008707 467 DPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKI 513 (557)
Q Consensus 467 d~~l~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~evl~~L~~~~~~ 513 (557)
.+...+..+.+++.+||+.||++|||++||++.|+.+...
T Consensus 240 -------~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~ 279 (327)
T 3lzb_A 240 -------QPPICTIDVYMIMRKCWMIDADSRPKFRELIIEFSKMARD 279 (327)
T ss_dssp -------CCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHTS
T ss_pred -------CCccCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHhC
Confidence 1112234688999999999999999999999999999864
No 118
>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=5.8e-41 Score=344.75 Aligned_cols=260 Identities=29% Similarity=0.455 Sum_probs=197.9
Q ss_pred HHhhcccCCCCceEEEEEEEcC--C--cEEEEEEccCcc-chhHHHHHHHHHHHhhcCCCCccceeeEEEe-cCeeEEEE
Q 008707 237 NNFCKKIGKGSFGSVYYGKMKD--G--KEVAVKIMADSC-SHRTQQFVTEVALLSRIHHRNLVPLIGYCEE-EHQRILVY 310 (557)
Q Consensus 237 ~~~~~~lG~G~~g~Vy~~~~~~--~--~~vavK~~~~~~-~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~-~~~~~lv~ 310 (557)
+++.+.||+|+||.||+|.+.+ + ..||+|.+.... ....+.+.+|+.++++++||||+++++++.. ++..++||
T Consensus 91 ~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~lv~ 170 (373)
T 3c1x_A 91 VHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVL 170 (373)
T ss_dssp EEEEEEEECCSSSEEEEEEEEETTTEEEEEEEEECCSCSCSHHHHHHHHHHTTSTTCCCTTBCCCCEEECCCSSCCEEEE
T ss_pred eecCcEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCCCeEEEE
Confidence 3456889999999999998642 2 368999886543 3456789999999999999999999998654 56789999
Q ss_pred EecCCCChhhhhhccCCCCCcCHHHHHHHHHHHHHHHHHHHcCCCCCeEeeccCCCCEEeCCCCcEEEecccCccccCCC
Q 008707 311 EYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEED 390 (557)
Q Consensus 311 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfgla~~~~~~ 390 (557)
||+++|+|.+++.. ....+++..++.++.||++||+|||+ .+|+||||||+|||++.++.+||+|||+++.....
T Consensus 171 e~~~~g~L~~~l~~--~~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~ 245 (373)
T 3c1x_A 171 PYMKHGDLRNFIRN--ETHNPTVKDLIGFGLQVAKGMKFLAS---KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDK 245 (373)
T ss_dssp ECCTTCBHHHHHHC--TTCCCBHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECTTCCEEECCC---------
T ss_pred ECCCCCCHHHHHhh--cccCCCHHHHHHHHHHHHHHHHHHHH---CCEecCccchheEEECCCCCEEEeecccccccccc
Confidence 99999999999974 34568899999999999999999998 99999999999999999999999999999865432
Q ss_pred Ccc---ccccccCCCCccCCcccCCCCCCcccceehhHHHHHHHHh-CCCCCCCCCccccccHHHHHHHHHhcCCccccc
Q 008707 391 LTH---ISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELIS-GKKPVSVEDFGAELNIVHWARSMIKKGDVISIV 466 (557)
Q Consensus 391 ~~~---~~~~~~g~~~y~aPE~l~~~~~s~~~DvwslG~ll~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 466 (557)
... ......+++.|+|||.+.+..++.++||||||+++|||+| |.+||......+ ... .+..+....
T Consensus 246 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt~~~~p~~~~~~~~---~~~----~~~~~~~~~-- 316 (373)
T 3c1x_A 246 EFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFD---ITV----YLLQGRRLL-- 316 (373)
T ss_dssp ------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCSSC---HHH----HHHTTCCCC--
T ss_pred ccccccccCCCCCcccccChHHhcCCCCCcHHHHHHHHHHHHHHHhCcCCCCCCCCHHH---HHH----HHHcCCCCC--
Confidence 211 1223346788999999999999999999999999999999 677886433222 221 122222111
Q ss_pred cccccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhhhhhcCC
Q 008707 467 DPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKIEKGG 517 (557)
Q Consensus 467 d~~l~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~evl~~L~~~~~~~~~~ 517 (557)
. +...+..+.+++.+||+.+|++|||++||++.|+++......+
T Consensus 317 ~-------p~~~~~~l~~li~~cl~~dp~~RPs~~ell~~L~~i~~~~~~~ 360 (373)
T 3c1x_A 317 Q-------PEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFIGE 360 (373)
T ss_dssp C-------CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHTCCSC
T ss_pred C-------CCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhcccc
Confidence 1 1112346889999999999999999999999999998765544
No 119
>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}
Probab=100.00 E-value=1.2e-40 Score=339.30 Aligned_cols=265 Identities=19% Similarity=0.200 Sum_probs=198.1
Q ss_pred HHHHhhcccCCCCceEEEEEEEc----CCcEEEEEEccCccch-----------hHHHHHHHHHHHhhcCCCCccceeeE
Q 008707 235 ATNNFCKKIGKGSFGSVYYGKMK----DGKEVAVKIMADSCSH-----------RTQQFVTEVALLSRIHHRNLVPLIGY 299 (557)
Q Consensus 235 ~~~~~~~~lG~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~-----------~~~~~~~E~~il~~l~h~nIv~~~~~ 299 (557)
..|++.+.||+|+||.||+|.+. ++..||+|++...... ....+.+|+..++.++||||++++++
T Consensus 37 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~ni~~~~~~ 116 (345)
T 2v62_A 37 NQWVLGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLDYLGIPLFYGS 116 (345)
T ss_dssp CEEEEEEEC------CEEEEEESSSCGGGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTCSCCCCCCEEEE
T ss_pred ceEEEEeeEeecCCeEEEEEEecCCCCccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhccccccCcceeecc
Confidence 44567899999999999999876 5788999998654321 11346678899999999999999999
Q ss_pred EEe----cCeeEEEEEecCCCChhhhhhccCCCCCcCHHHHHHHHHHHHHHHHHHHcCCCCCeEeeccCCCCEEeCCCC-
Q 008707 300 CEE----EHQRILVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINM- 374 (557)
Q Consensus 300 ~~~----~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~dlk~~NIll~~~~- 374 (557)
+.. ....++||||+ +++|.+++... ..+++..++.++.||+.||+|||+ .+|+||||||+|||++.++
T Consensus 117 ~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~---~~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dlkp~NIll~~~~~ 189 (345)
T 2v62_A 117 GLTEFKGRSYRFMVMERL-GIDLQKISGQN---GTFKKSTVLQLGIRMLDVLEYIHE---NEYVHGDIKAANLLLGYKNP 189 (345)
T ss_dssp EEEESSSCEEEEEEEECE-EEEHHHHCBGG---GBCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEEESSST
T ss_pred cccccCCCcEEEEEEecc-CCCHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHh---CCeeCCCcCHHHEEEccCCC
Confidence 987 67889999999 99999999743 378999999999999999999998 9999999999999998877
Q ss_pred -cEEEecccCccccCCCCcc------ccccccCCCCccCCcccCCCCCCcccceehhHHHHHHHHhCCCCCCCCCccccc
Q 008707 375 -RAKVSDFGLSRQAEEDLTH------ISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAEL 447 (557)
Q Consensus 375 -~~kl~Dfgla~~~~~~~~~------~~~~~~g~~~y~aPE~l~~~~~s~~~DvwslG~ll~elltg~~pf~~~~~~~~~ 447 (557)
.+||+|||+++........ ......||+.|+|||.+.+..++.++||||||+++|||++|+.||...... ..
T Consensus 190 ~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~-~~ 268 (345)
T 2v62_A 190 DQVYLADYGLSYRYCPNGNHKQYQENPRKGHNGTIEFTSLDAHKGVALSRRSDVEILGYCMLRWLCGKLPWEQNLKD-PV 268 (345)
T ss_dssp TSEEECCCTTCEESSGGGCCCCCCCCGGGCSCSCTTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCTTGGGTTC-HH
T ss_pred CcEEEEeCCCceecccccccccchhccccccCCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCccccccc-cH
Confidence 9999999999876432211 113446899999999999999999999999999999999999999632221 11
Q ss_pred cHHHHHHHHHhcCCccccccccccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhhh
Q 008707 448 NIVHWARSMIKKGDVISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIK 512 (557)
Q Consensus 448 ~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~evl~~L~~~~~ 512 (557)
... ......... ....+..... ....+..+.+++.+||+.||++|||+++|++.|++...
T Consensus 269 ~~~-~~~~~~~~~-~~~~~~~~~~---~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~ 328 (345)
T 2v62_A 269 AVQ-TAKTNLLDE-LPQSVLKWAP---SGSSCCEIAQFLVCAHSLAYDEKPNYQALKKILNPHGI 328 (345)
T ss_dssp HHH-HHHHHHHHT-TTHHHHHHSC---TTSCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHCTTCC
T ss_pred HHH-HHHHhhccc-ccHHHHhhcc---ccccHHHHHHHHHHHhhcCcccCCCHHHHHHHHhccCC
Confidence 111 111111111 1000000000 00123478899999999999999999999999988654
No 120
>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=2.1e-40 Score=330.05 Aligned_cols=259 Identities=27% Similarity=0.401 Sum_probs=205.0
Q ss_pred hhcccCCCCceEEEEEEEcC-C---cEEEEEEccCccc-hhHHHHHHHHHHHhhcCCCCccceeeEEEecCee-EEEEEe
Q 008707 239 FCKKIGKGSFGSVYYGKMKD-G---KEVAVKIMADSCS-HRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQR-ILVYEY 312 (557)
Q Consensus 239 ~~~~lG~G~~g~Vy~~~~~~-~---~~vavK~~~~~~~-~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~-~lv~e~ 312 (557)
..+.||+|+||.||+|.+.+ + ..||+|++..... ...+.+.+|+++++.++||||+++++++.+.+.. ++||||
T Consensus 25 ~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~v~e~ 104 (298)
T 3pls_A 25 SDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLALIGIMLPPEGLPHVLLPY 104 (298)
T ss_dssp EEEEEEEETTEEEEEEEEECSSSCEEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEEEECC
T ss_pred cCceeccCCCceEEEEEEecCCCceeeeeeeeccccccHHHHHHHHHHHHHHHhCCCCCeeeEEEEEecCCCCcEEEEec
Confidence 35889999999999998643 2 3799999875433 3457789999999999999999999999876655 999999
Q ss_pred cCCCChhhhhhccCCCCCcCHHHHHHHHHHHHHHHHHHHcCCCCCeEeeccCCCCEEeCCCCcEEEecccCccccCCCCc
Q 008707 313 MHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEEDLT 392 (557)
Q Consensus 313 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfgla~~~~~~~~ 392 (557)
+.+|+|.+++.. ....+++..++.++.|++.||+|||+ .+++||||||+||+++.++.+||+|||++........
T Consensus 105 ~~~~~L~~~~~~--~~~~~~~~~~~~i~~qi~~~l~~LH~---~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~ 179 (298)
T 3pls_A 105 MCHGDLLQFIRS--PQRNPTVKDLISFGLQVARGMEYLAE---QKFVHRDLAARNCMLDESFTVKVADFGLARDILDREY 179 (298)
T ss_dssp CTTCBHHHHHHC--TTCCCBHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEECTTCCEEECCTTSSCTTTTGGG
T ss_pred ccCCCHHHHHhc--cccCCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCCcceEEEcCCCcEEeCcCCCcccccCCcc
Confidence 999999999975 34668999999999999999999998 9999999999999999999999999999986543221
Q ss_pred ---cccccccCCCCccCCcccCCCCCCcccceehhHHHHHHHHhCCCCCCCCCccccccHHHHHHHHHhcCCcccccccc
Q 008707 393 ---HISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPV 469 (557)
Q Consensus 393 ---~~~~~~~g~~~y~aPE~l~~~~~s~~~DvwslG~ll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 469 (557)
.......+++.|+|||.+.+..++.++||||||+++|+|++|..|+..... ...... .+..+....
T Consensus 180 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~~~~~~~~--~~~~~~----~~~~~~~~~----- 248 (298)
T 3pls_A 180 YSVQQHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAPPYRHID--PFDLTH----FLAQGRRLP----- 248 (298)
T ss_dssp GCSCCSSCTTCGGGGSCHHHHTTCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSC--GGGHHH----HHHTTCCCC-----
T ss_pred cccccCcCCCCCccccChhhhccCCCChhhchhhHHHHHHHHhhCCCCCCccCC--HHHHHH----HhhcCCCCC-----
Confidence 122234578899999999999999999999999999999996555432221 112222 122222111
Q ss_pred ccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhhhhhcCC
Q 008707 470 LIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKIEKGG 517 (557)
Q Consensus 470 l~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~evl~~L~~~~~~~~~~ 517 (557)
.+...+..+.+++.+||+.+|++|||++|+++.|+++.......
T Consensus 249 ----~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~l~~~~~~l~~~ 292 (298)
T 3pls_A 249 ----QPEYCPDSLYQVMQQCWEADPAVRPTFRVLVGEVEQIVSALLGD 292 (298)
T ss_dssp ----CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHCCSC
T ss_pred ----CCccchHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHHHhcc
Confidence 11112346889999999999999999999999999998865544
No 121
>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...
Probab=100.00 E-value=7.5e-41 Score=340.88 Aligned_cols=242 Identities=23% Similarity=0.291 Sum_probs=201.2
Q ss_pred HHhhcccCCCCceEEEEEEEc-CCcEEEEEEccCcc---chhHHHHHHHHHHHhhcCCCCccceeeEEEecCeeEEEEEe
Q 008707 237 NNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSC---SHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYEY 312 (557)
Q Consensus 237 ~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~lv~e~ 312 (557)
|++.+.||+|+||.||+|... +|+.||+|++.... ....+.+.+|+++++.++||||+++++++.+.+..++||||
T Consensus 43 y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~ 122 (350)
T 1rdq_E 43 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEY 122 (350)
T ss_dssp EEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred CEEEEEeecCcCcEEEEEEECCCCCEEEEEEEEhHHhccHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCEEEEEEcC
Confidence 455789999999999999876 68999999986432 22346788999999999999999999999999999999999
Q ss_pred cCCCChhhhhhccCCCCCcCHHHHHHHHHHHHHHHHHHHcCCCCCeEeeccCCCCEEeCCCCcEEEecccCccccCCCCc
Q 008707 313 MHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEEDLT 392 (557)
Q Consensus 313 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfgla~~~~~~~~ 392 (557)
+++|+|.+++.. ...+++..+..++.||+.||+|||+ ++|+||||||+|||++.++.+||+|||++......
T Consensus 123 ~~gg~L~~~l~~---~~~~~~~~~~~~~~qi~~aL~~LH~---~~ivHrDlkp~NIll~~~g~~kL~DFg~a~~~~~~-- 194 (350)
T 1rdq_E 123 VAGGEMFSHLRR---IGRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR-- 194 (350)
T ss_dssp CTTCBHHHHHHH---HCCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTSCEEECCCTTCEECSSC--
T ss_pred CCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHH---CCcccccCccceEEECCCCCEEEcccccceeccCC--
Confidence 999999999974 3468999999999999999999998 99999999999999999999999999999876543
Q ss_pred cccccccCCCCccCCcccCCCCCCcccceehhHHHHHHHHhCCCCCCCCCccccccHHHHHHHHHhcCCccccccccccC
Q 008707 393 HISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPVLIG 472 (557)
Q Consensus 393 ~~~~~~~g~~~y~aPE~l~~~~~s~~~DvwslG~ll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~ 472 (557)
.....||+.|+|||++.+..++.++|||||||++|||++|+.||...+.. +.. ..+..+... +
T Consensus 195 --~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~------~~~-~~i~~~~~~------~-- 257 (350)
T 1rdq_E 195 --TWTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPI------QIY-EKIVSGKVR------F-- 257 (350)
T ss_dssp --BCCCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHH------HHH-HHHHHCCCC------C--
T ss_pred --cccccCCccccCHHHhcCCCCCCcCCEecccHhHhHHhhCCCCCCCCCHH------HHH-HHHHcCCCC------C--
Confidence 22346899999999999999999999999999999999999999744321 111 122222211 1
Q ss_pred CCCHHHHHHHHHHHHHccccCCCCCCC-----HHHHHH
Q 008707 473 NVKIESIWRIAEVAIQCVEQRGFSRPK-----MQEIVL 505 (557)
Q Consensus 473 ~~~~~~~~~l~~li~~cl~~~P~~RPt-----~~evl~ 505 (557)
+......+.+++.+||+.||++||+ ++||++
T Consensus 258 --p~~~~~~~~~li~~lL~~dp~~R~~~~~~~~~ei~~ 293 (350)
T 1rdq_E 258 --PSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKN 293 (350)
T ss_dssp --CTTCCHHHHHHHHHHSCSCTTTCTTSSTTTTHHHHT
T ss_pred --CCCCCHHHHHHHHHHhhcCHHhccCCccCCHHHHHh
Confidence 1112346889999999999999998 888875
No 122
>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}
Probab=100.00 E-value=6.1e-41 Score=336.17 Aligned_cols=262 Identities=23% Similarity=0.307 Sum_probs=196.9
Q ss_pred HHhhcccCCCCceEEEEEEEc-CCcEEEEEEccCccc--hhHHHHHHHHHHHhhcCCCCccceeeEEEecCeeEEEEEec
Q 008707 237 NNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCS--HRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYEYM 313 (557)
Q Consensus 237 ~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~lv~e~~ 313 (557)
|++.+.||+|+||.||+|.+. +|+.||+|++..... ...+.+.+|++++++++||||+++++++.+.+..++||||+
T Consensus 5 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 84 (311)
T 4agu_A 5 YEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEVFRRKRRLHLVFEYC 84 (311)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCCCC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred ceEeeEEeecCCeEEEEEEeCCCCcEEEEEEeeccccchHHHHHHHHHHHHHHhCCCCCccchhheeecCCeEEEEEEeC
Confidence 445789999999999999886 489999998865432 23467889999999999999999999999999999999999
Q ss_pred CCCChhhhhhccCCCCCcCHHHHHHHHHHHHHHHHHHHcCCCCCeEeeccCCCCEEeCCCCcEEEecccCccccCCCCcc
Q 008707 314 HNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEEDLTH 393 (557)
Q Consensus 314 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfgla~~~~~~~~~ 393 (557)
++++|.+++. ....+++..+..++.|++.||+|||+ .|++||||||+||+++.++.+||+|||++.........
T Consensus 85 ~~~~l~~~~~---~~~~~~~~~~~~i~~~l~~~l~~lH~---~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~ 158 (311)
T 4agu_A 85 DHTVLHELDR---YQRGVPEHLVKSITWQTLQAVNFCHK---HNCIHRDVKPENILITKHSVIKLCDFGFARLLTGPSDY 158 (311)
T ss_dssp SEEHHHHHHH---TSSCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTSCEEECCCTTCEECC-----
T ss_pred CCchHHHHHh---hhcCCCHHHHHHHHHHHHHHHHHHHH---CCCcCCCCChhhEEEcCCCCEEEeeCCCchhccCcccc
Confidence 9999998876 34568999999999999999999998 99999999999999999999999999999876543222
Q ss_pred ccccccCCCCccCCcccCC-CCCCcccceehhHHHHHHHHhCCCCCCCCCccccccHHHHH--------HHHHhcCCccc
Q 008707 394 ISSVARGTVGYLDPEYYGN-QQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWA--------RSMIKKGDVIS 464 (557)
Q Consensus 394 ~~~~~~g~~~y~aPE~l~~-~~~s~~~DvwslG~ll~elltg~~pf~~~~~~~~~~~~~~~--------~~~~~~~~~~~ 464 (557)
.....||+.|+|||.+.+ ..++.++||||+|+++|+|++|+.||...+..+........ ...........
T Consensus 159 -~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (311)
T 4agu_A 159 -YDDEVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQLYLIRKTLGDLIPRHQQVFSTNQYFS 237 (311)
T ss_dssp --------GGGCCHHHHHTCSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHHHHTCGGGT
T ss_pred -cCCCcCCccccChHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhcccccccccccccccccc
Confidence 223458999999999876 67899999999999999999999999855433221111100 00011110000
Q ss_pred ---cccccccCC---CCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 008707 465 ---IVDPVLIGN---VKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 505 (557)
Q Consensus 465 ---~~d~~l~~~---~~~~~~~~l~~li~~cl~~~P~~RPt~~evl~ 505 (557)
..++..... ........+.+++.+||+.||++|||++|+++
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 284 (311)
T 4agu_A 238 GVKIPDPEDMEPLELKFPNISYPALGLLKGCLHMDPTERLTCEQLLH 284 (311)
T ss_dssp TCCCCCCSSCCCHHHHCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHT
T ss_pred cCcCCCccccchhhhhcccccHHHHHHHHHHccCChhhcCCHHHHhc
Confidence 001000000 00122346889999999999999999999986
No 123
>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A
Probab=100.00 E-value=1e-40 Score=341.70 Aligned_cols=251 Identities=24% Similarity=0.297 Sum_probs=192.1
Q ss_pred HHHhhcccCCCCceEEEEEEEc-CCcEEEEEEccCccchhHHHHHHHHHHHhhcCCCCccceeeEEEecCeeEEEEEecC
Q 008707 236 TNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCSHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYEYMH 314 (557)
Q Consensus 236 ~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~lv~e~~~ 314 (557)
.|++.+.||+|+||.||++... +++.||+|++..... ..+.+.+|+.+++.++||||+++++++.+.+..++||||++
T Consensus 21 ~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~ 99 (361)
T 3uc3_A 21 RYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGAA-IDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIIMEYAS 99 (361)
T ss_dssp TEEEEEEESSSTTSSEEEEEETTTCCEEEEEEEESSTT-SCHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEECCC
T ss_pred cEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEecCcc-ccHHHHHHHHHHHhCCCCCCCcEEEEEeeCCEEEEEEEeCC
Confidence 4567899999999999999876 689999999875432 23568899999999999999999999999999999999999
Q ss_pred CCChhhhhhccCCCCCcCHHHHHHHHHHHHHHHHHHHcCCCCCeEeeccCCCCEEeCCCCc--EEEecccCccccCCCCc
Q 008707 315 NGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMR--AKVSDFGLSRQAEEDLT 392 (557)
Q Consensus 315 ~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~dlk~~NIll~~~~~--~kl~Dfgla~~~~~~~~ 392 (557)
+|+|.+++.. ...+++..+..++.|++.||+|||+ +||+||||||+||+++.++. +||+|||+++.......
T Consensus 100 ~~~L~~~l~~---~~~~~~~~~~~i~~ql~~~L~~LH~---~~ivH~Dlkp~Nill~~~~~~~~kl~Dfg~a~~~~~~~~ 173 (361)
T 3uc3_A 100 GGELYERICN---AGRFSEDEARFFFQQLLSGVSYCHS---MQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQ 173 (361)
T ss_dssp SCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHH---TTCCSCCCCGGGEEECSSSSCCEEECCCCCC--------
T ss_pred CCCHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEEEcCCCCceEEEeecCccccccccCC
Confidence 9999999874 3568999999999999999999998 99999999999999987765 99999999875432211
Q ss_pred cccccccCCCCccCCcccCCCCCCcc-cceehhHHHHHHHHhCCCCCCCCCccccccHHHHHHHHHhcCCcccccccccc
Q 008707 393 HISSVARGTVGYLDPEYYGNQQLTEK-SDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPVLI 471 (557)
Q Consensus 393 ~~~~~~~g~~~y~aPE~l~~~~~s~~-~DvwslG~ll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~ 471 (557)
.....||+.|+|||++.+..++.+ +|||||||++|+|++|+.||....... ........... .... ..+
T Consensus 174 --~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~--~~~~~~~~~~~-~~~~-~~~---- 243 (361)
T 3uc3_A 174 --PKSTVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPR--DYRKTIQRILS-VKYS-IPD---- 243 (361)
T ss_dssp ---------CTTSCHHHHHCSSCCHHHHHHHHHHHHHHHHHHSSCSCC----CC--CHHHHHHHHHT-TCCC-CCT----
T ss_pred --CCCCcCCCCcCChhhhcCCCCCCCeeeeehhHHHHHHHHhCCCCCCCCccHH--HHHHHHHHHhc-CCCC-CCC----
Confidence 223458999999999988777655 899999999999999999997543322 22222222221 1110 000
Q ss_pred CCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 008707 472 GNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLA 506 (557)
Q Consensus 472 ~~~~~~~~~~l~~li~~cl~~~P~~RPt~~evl~~ 506 (557)
.......+.+++.+||+.||++|||+.|+++.
T Consensus 244 ---~~~~s~~~~~li~~~L~~dP~~Rps~~ell~h 275 (361)
T 3uc3_A 244 ---DIRISPECCHLISRIFVADPATRISIPEIKTH 275 (361)
T ss_dssp ---TSCCCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred ---cCCCCHHHHHHHHHHccCChhHCcCHHHHHhC
Confidence 00112367899999999999999999999874
No 124
>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}
Probab=100.00 E-value=5.3e-41 Score=348.52 Aligned_cols=252 Identities=24% Similarity=0.272 Sum_probs=200.1
Q ss_pred HHhhcccCCCCceEEEEEEEc-CCcEEEEEEccCcc---chhHHHHHHHHHHHhhcCCCCccceeeEEEecCeeEEEEEe
Q 008707 237 NNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSC---SHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYEY 312 (557)
Q Consensus 237 ~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~lv~e~ 312 (557)
|++.+.||+|+||.||+|..+ +|+.||+|++.+.. ....+.+.+|..++..++||||+++++++.+.+..++||||
T Consensus 63 f~~~~~lG~G~fG~V~~~~~~~~~~~vAiK~l~k~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~~~~~~lVmE~ 142 (412)
T 2vd5_A 63 FEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQLHFAFQDENYLYLVMEY 142 (412)
T ss_dssp EEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHGGGCCHHHHHHHHHHSCTTTBCCEEEEEECSSEEEEEECC
T ss_pred EEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEEEEEEcC
Confidence 445788999999999999886 68999999986532 12234588899999999999999999999999999999999
Q ss_pred cCCCChhhhhhccCCCCCcCHHHHHHHHHHHHHHHHHHHcCCCCCeEeeccCCCCEEeCCCCcEEEecccCccccCCCCc
Q 008707 313 MHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEEDLT 392 (557)
Q Consensus 313 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfgla~~~~~~~~ 392 (557)
+++|+|.+++... +..+++..+..++.||+.||+|||+ .+|+||||||+|||++.++.+||+|||++........
T Consensus 143 ~~gg~L~~~l~~~--~~~l~~~~~~~~~~qi~~aL~~LH~---~giiHrDLKp~NILld~~g~vkL~DFGla~~~~~~~~ 217 (412)
T 2vd5_A 143 YVGGDLLTLLSKF--GERIPAEMARFYLAEIVMAIDSVHR---LGYVHRDIKPDNILLDRCGHIRLADFGSCLKLRADGT 217 (412)
T ss_dssp CCSCBHHHHHHHH--SSCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTSCEEECCCTTCEECCTTSC
T ss_pred CCCCcHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHH---CCeeecccCHHHeeecCCCCEEEeechhheeccCCCc
Confidence 9999999999753 3468999999999999999999998 9999999999999999999999999999987755444
Q ss_pred cccccccCCCCccCCcccC-------CCCCCcccceehhHHHHHHHHhCCCCCCCCCccccccHHHHHHHHHhcCCcccc
Q 008707 393 HISSVARGTVGYLDPEYYG-------NQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISI 465 (557)
Q Consensus 393 ~~~~~~~g~~~y~aPE~l~-------~~~~s~~~DvwslG~ll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 465 (557)
.......||+.|+|||++. ...++.++|||||||++|||++|+.||...+.... ............
T Consensus 218 ~~~~~~~Gt~~Y~APE~l~~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~------~~~i~~~~~~~~- 290 (412)
T 2vd5_A 218 VRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADSTAET------YGKIVHYKEHLS- 290 (412)
T ss_dssp EECSSCCSCGGGCCHHHHHHHHTCTTCSEECTHHHHHHHHHHHHHHHHSSCTTCCSSHHHH------HHHHHTHHHHCC-
T ss_pred cccceeccccCcCCHHHHhhcccCcCCCCCChHHhhhHHhHHHHHHHhCCCCCCCCCHHHH------HHHHHhcccCcC-
Confidence 3344457999999999987 45789999999999999999999999975432211 111111000000
Q ss_pred ccccccCCCCHHHHHHHHHHHHHccccCCCCC---CCHHHHHHH
Q 008707 466 VDPVLIGNVKIESIWRIAEVAIQCVEQRGFSR---PKMQEIVLA 506 (557)
Q Consensus 466 ~d~~l~~~~~~~~~~~l~~li~~cl~~~P~~R---Pt~~evl~~ 506 (557)
-+.. ....+..+.+++.+||. +|++| |+++||++.
T Consensus 291 -~p~~----~~~~s~~~~dli~~lL~-~p~~Rlgr~~~~ei~~H 328 (412)
T 2vd5_A 291 -LPLV----DEGVPEEARDFIQRLLC-PPETRLGRGGAGDFRTH 328 (412)
T ss_dssp -CC--------CCCHHHHHHHHTTSS-CGGGCTTTTTHHHHHTS
T ss_pred -CCcc----ccCCCHHHHHHHHHHcC-ChhhcCCCCCHHHHhcC
Confidence 0100 11123478899999999 99998 589998763
No 125
>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}
Probab=100.00 E-value=6.1e-41 Score=335.86 Aligned_cols=266 Identities=23% Similarity=0.271 Sum_probs=197.9
Q ss_pred hHHHHHHHHhhcccCCCCceEEEEEEEc-CCcEEEEEEccCcc-----chhHHHHHHHHHHHhhcC---CCCccceeeEE
Q 008707 230 PELEEATNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSC-----SHRTQQFVTEVALLSRIH---HRNLVPLIGYC 300 (557)
Q Consensus 230 ~~~~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~-----~~~~~~~~~E~~il~~l~---h~nIv~~~~~~ 300 (557)
.++....|++.+.||+|+||+||+|.+. +++.||+|++.... ......+.+|+++++.++ ||||+++++++
T Consensus 4 g~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~niv~~~~~~ 83 (308)
T 3g33_A 4 GSMATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDVC 83 (308)
T ss_dssp ------CCEEEEEECCSSSCCEEEEECTTTCCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHHCCTTBCCEEEEE
T ss_pred CcccccceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEecccccccccccchhHHHHHHHHHHHhhcCCCCeEEeeeee
Confidence 3445566778899999999999999864 68999999986322 112345677888877775 99999999999
Q ss_pred EecC-----eeEEEEEecCCCChhhhhhccCCCCCcCHHHHHHHHHHHHHHHHHHHcCCCCCeEeeccCCCCEEeCCCCc
Q 008707 301 EEEH-----QRILVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMR 375 (557)
Q Consensus 301 ~~~~-----~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~dlk~~NIll~~~~~ 375 (557)
.... ..++|||++. ++|.+++... ....+++..+..++.||+.||+|||+ .+|+||||||+||+++.++.
T Consensus 84 ~~~~~~~~~~~~lv~e~~~-~~L~~~~~~~-~~~~~~~~~~~~i~~qi~~al~~lH~---~~ivH~Dlkp~Nil~~~~~~ 158 (308)
T 3g33_A 84 ATSRTDREIKVTLVFEHVD-QDLRTYLDKA-PPPGLPAETIKDLMRQFLRGLDFLHA---NCIVHRDLKPENILVTSGGT 158 (308)
T ss_dssp EECCSSSEEEEEEEEECCC-CBHHHHHHTC-CTTCSCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCTTTEEECTTSC
T ss_pred eccCCCCceeEEEEehhhh-cCHHHHHhhc-cCCCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEEEcCCCC
Confidence 7755 4789999996 6999998754 23448999999999999999999998 99999999999999999999
Q ss_pred EEEecccCccccCCCCccccccccCCCCccCCcccCCCCCCcccceehhHHHHHHHHhCCCCCCCCCccccccHHHHHHH
Q 008707 376 AKVSDFGLSRQAEEDLTHISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARS 455 (557)
Q Consensus 376 ~kl~Dfgla~~~~~~~~~~~~~~~g~~~y~aPE~l~~~~~s~~~DvwslG~ll~elltg~~pf~~~~~~~~~~~~~~~~~ 455 (557)
+||+|||++........ .....||+.|+|||.+.+..++.++|||||||++|+|++|+.||...+... ....+..
T Consensus 159 ~kl~Dfg~a~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~---~~~~i~~ 233 (308)
T 3g33_A 159 VKLADFGLARIYSYQMA--LTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEAD---QLGKIFD 233 (308)
T ss_dssp EEECSCSCTTTSTTCCC--SGGGGCCCSSCCHHHHHTSCCCSTHHHHHHHHHHHHTTTSSCSCCCSSHHH---HHHHHHH
T ss_pred EEEeeCccccccCCCcc--cCCccccccccCchHHcCCCCCchHHHHHHHHHHHHHHhCCCCCCCCCHHH---HHHHHHH
Confidence 99999999987644322 233458999999999999999999999999999999999999997543322 1111112
Q ss_pred HHhcCCcccccc------ccccC--C-----CCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 008707 456 MIKKGDVISIVD------PVLIG--N-----VKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 505 (557)
Q Consensus 456 ~~~~~~~~~~~d------~~l~~--~-----~~~~~~~~l~~li~~cl~~~P~~RPt~~evl~ 505 (557)
............ ..+.. . ........+.+++.+||+.||++|||+.|+++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 296 (308)
T 3g33_A 234 LIGLPPEDDWPRDVSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQ 296 (308)
T ss_dssp HHCCCCTTTSCSSCSSCGGGSCCCCCCCHHHHSCSCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred HhCCCChhhccchhhccccccCCCCCCcHHHhCccccHHHHHHHHHHhcCCCccCCCHHHHhc
Confidence 111111000000 00000 0 00112347889999999999999999999985
No 126
>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.6e-40 Score=336.71 Aligned_cols=260 Identities=29% Similarity=0.476 Sum_probs=203.3
Q ss_pred HHHHhhcccCCCCceEEEEEEEcC-----CcEEEEEEccCcc-chhHHHHHHHHHHHhhcCCCCccceeeEEEecCeeEE
Q 008707 235 ATNNFCKKIGKGSFGSVYYGKMKD-----GKEVAVKIMADSC-SHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRIL 308 (557)
Q Consensus 235 ~~~~~~~~lG~G~~g~Vy~~~~~~-----~~~vavK~~~~~~-~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~l 308 (557)
..+++.+.||+|+||.||+|.+.. +..||+|++.... ......+.+|+++++.++||||+++++++.+.+..++
T Consensus 44 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 123 (333)
T 1mqb_A 44 SCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPMMI 123 (333)
T ss_dssp TTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEE
T ss_pred HHhhcccEEecCCCeEEEEEEEecCCCCccccEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCCcEE
Confidence 344456889999999999998753 2369999987543 3345678999999999999999999999999999999
Q ss_pred EEEecCCCChhhhhhccCCCCCcCHHHHHHHHHHHHHHHHHHHcCCCCCeEeeccCCCCEEeCCCCcEEEecccCccccC
Q 008707 309 VYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAE 388 (557)
Q Consensus 309 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfgla~~~~ 388 (557)
||||+++|+|.+++... ...+++..++.++.|++.||+|||+ .+++||||||+||+++.++.+||+|||++....
T Consensus 124 v~e~~~~~~L~~~l~~~--~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~ 198 (333)
T 1mqb_A 124 ITEYMENGALDKFLREK--DGEFSVLQLVGMLRGIAAGMKYLAN---MNYVHRDLAARNILVNSNLVCKVSDFGLSRVLE 198 (333)
T ss_dssp EEECCTTEEHHHHHHHT--TTCSCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECTTCCEEECCCCC-----
T ss_pred EEeCCCCCcHHHHHHhC--CCCCCHHHHHHHHHHHHHHHHHHHh---CCeeCCCCChheEEECCCCcEEECCCCcchhhc
Confidence 99999999999999753 4568999999999999999999998 999999999999999999999999999998765
Q ss_pred CCCcc--ccccccCCCCccCCcccCCCCCCcccceehhHHHHHHHHh-CCCCCCCCCccccccHHHHHHHHHhcCCcccc
Q 008707 389 EDLTH--ISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELIS-GKKPVSVEDFGAELNIVHWARSMIKKGDVISI 465 (557)
Q Consensus 389 ~~~~~--~~~~~~g~~~y~aPE~l~~~~~s~~~DvwslG~ll~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 465 (557)
..... ......+++.|+|||.+.+..++.++||||||+++|||++ |+.||...... + +...+..+....
T Consensus 199 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~------~-~~~~~~~~~~~~- 270 (333)
T 1mqb_A 199 DDPEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNH------E-VMKAINDGFRLP- 270 (333)
T ss_dssp ------------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHH------H-HHHHHHTTCCCC-
T ss_pred cccccccccCCCCccccccCchhcccCCCCchhhhHHHHHHHHHHHcCCCCCcccCCHH------H-HHHHHHCCCcCC-
Confidence 43221 1122335778999999999999999999999999999999 99999743221 1 112222221111
Q ss_pred ccccccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhhhhhc
Q 008707 466 VDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKIEK 515 (557)
Q Consensus 466 ~d~~l~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~evl~~L~~~~~~~~ 515 (557)
.....+..+.+++.+||+.+|++||++.||++.|+++.....
T Consensus 271 --------~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~~~~~~ 312 (333)
T 1mqb_A 271 --------TPMDCPSAIYQLMMQCWQQERARRPKFADIVSILDKLIRAPD 312 (333)
T ss_dssp --------CCTTCBHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHSGG
T ss_pred --------CcccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhcch
Confidence 111223478899999999999999999999999999887433
No 127
>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A
Probab=100.00 E-value=4.7e-40 Score=331.49 Aligned_cols=251 Identities=24% Similarity=0.324 Sum_probs=204.5
Q ss_pred HHHHHhhcccCCCCceEEEEEEEc-CCcEEEEEEccCccch------hHHHHHHHHHHHhhcCCCCccceeeEEEecCee
Q 008707 234 EATNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCSH------RTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQR 306 (557)
Q Consensus 234 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~------~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~ 306 (557)
...|++.+.||+|+||.||+|... +|+.||+|++...... ..+.+.+|+++++.++||||+++++++.+.+..
T Consensus 11 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 90 (321)
T 2a2a_A 11 EDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTDV 90 (321)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEE
T ss_pred hccEEEeeEeeecCCEEEEEEEECCCCeEEEEEEEecccccccccchhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEE
Confidence 456778899999999999999876 5899999998653221 356789999999999999999999999999999
Q ss_pred EEEEEecCCCChhhhhhccCCCCCcCHHHHHHHHHHHHHHHHHHHcCCCCCeEeeccCCCCEEeCCCC----cEEEeccc
Q 008707 307 ILVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINM----RAKVSDFG 382 (557)
Q Consensus 307 ~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~dlk~~NIll~~~~----~~kl~Dfg 382 (557)
++||||+++++|.+++.. ...+++..+..++.|++.||+|||+ .+++||||||+||+++.++ .+||+|||
T Consensus 91 ~lv~e~~~~~~L~~~l~~---~~~~~~~~~~~i~~qi~~aL~~lH~---~~ivH~dikp~NIl~~~~~~~~~~~kl~Dfg 164 (321)
T 2a2a_A 91 VLILELVSGGELFDFLAQ---KESLSEEEATSFIKQILDGVNYLHT---KKIAHFDLKPENIMLLDKNIPIPHIKLIDFG 164 (321)
T ss_dssp EEEECCCCSCBHHHHHHT---CSCEEHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEESCTTSSSCCEEECCCT
T ss_pred EEEEEcCCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCChHHEEEecCCCCcCCEEEccCc
Confidence 999999999999999973 4568999999999999999999998 9999999999999999887 79999999
Q ss_pred CccccCCCCccccccccCCCCccCCcccCCCCCCcccceehhHHHHHHHHhCCCCCCCCCccccccHHHHHHHHHhcCCc
Q 008707 383 LSRQAEEDLTHISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDV 462 (557)
Q Consensus 383 la~~~~~~~~~~~~~~~g~~~y~aPE~l~~~~~s~~~DvwslG~ll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 462 (557)
++........ .....||+.|+|||.+.+..++.++||||||+++|+|++|..||....... ... .+..+..
T Consensus 165 ~~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~------~~~-~i~~~~~ 235 (321)
T 2a2a_A 165 LAHEIEDGVE--FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQE------TLA-NITSVSY 235 (321)
T ss_dssp TCEECCTTCC--CCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHH------HHH-HHHTTCC
T ss_pred cceecCcccc--ccccCCCCCccCcccccCCCCCCccccHHHHHHHHHHHHCCCCCCCCCHHH------HHH-HHHhccc
Confidence 9987654322 223458999999999999999999999999999999999999997443211 111 1111111
Q ss_pred cccccccccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 008707 463 ISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 505 (557)
Q Consensus 463 ~~~~d~~l~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~evl~ 505 (557)
..++..... .+..+.+++.+||+.||++|||+.|+++
T Consensus 236 --~~~~~~~~~----~~~~~~~li~~~l~~dp~~Rps~~e~l~ 272 (321)
T 2a2a_A 236 --DFDEEFFSH----TSELAKDFIRKLLVKETRKRLTIQEALR 272 (321)
T ss_dssp --CCCHHHHTT----CCHHHHHHHHTTSCSSTTTSCCHHHHHH
T ss_pred --ccChhhhcc----cCHHHHHHHHHHcCCChhhCcCHHHHhc
Confidence 011111111 1236889999999999999999999986
No 128
>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*
Probab=100.00 E-value=8.4e-41 Score=335.57 Aligned_cols=262 Identities=26% Similarity=0.421 Sum_probs=199.0
Q ss_pred HHHHHhhcccCCCCceEEEEEEEcC----CcEEEEEEccCcc--chhHHHHHHHHHHHhhcCCCCccceeeEEEecC---
Q 008707 234 EATNNFCKKIGKGSFGSVYYGKMKD----GKEVAVKIMADSC--SHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEH--- 304 (557)
Q Consensus 234 ~~~~~~~~~lG~G~~g~Vy~~~~~~----~~~vavK~~~~~~--~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~--- 304 (557)
...|.+.+.||+|+||.||+|.+.. +..||+|++.... ....+.+.+|++++++++||||+++++++.+..
T Consensus 33 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~ 112 (313)
T 3brb_A 33 RNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLLGVCIEMSSQG 112 (313)
T ss_dssp GGGEEEEEEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---CCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEC-----
T ss_pred HHHeeeccceeecCCeEEEEEEEeccCCceeEEEEEEEeccccchhHHHHHHHHHHHHhcCCCCCeeeeeEEEeeccccC
Confidence 3455668899999999999997652 4589999986542 334567899999999999999999999987654
Q ss_pred --eeEEEEEecCCCChhhhhhccC---CCCCcCHHHHHHHHHHHHHHHHHHHcCCCCCeEeeccCCCCEEeCCCCcEEEe
Q 008707 305 --QRILVYEYMHNGTLRDRLHGSV---NQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVS 379 (557)
Q Consensus 305 --~~~lv~e~~~~gsL~~~l~~~~---~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~ 379 (557)
..++||||+++|+|.+++.... ....+++..++.++.|+++||+|||+ .+++||||||+||+++.++.+||+
T Consensus 113 ~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~dikp~NIli~~~~~~kl~ 189 (313)
T 3brb_A 113 IPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLSN---RNFLHRDLAARNCMLRDDMTVCVA 189 (313)
T ss_dssp --CEEEEEECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHHHHHHHHT---TTCCCCCCSGGGEEECTTSCEEEC
T ss_pred CcccEEEEecccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCCcceEEEcCCCcEEEe
Confidence 3599999999999999985321 34568999999999999999999998 999999999999999999999999
Q ss_pred cccCccccCCCCc-cccccccCCCCccCCcccCCCCCCcccceehhHHHHHHHHh-CCCCCCCCCccccccHHHHHHHHH
Q 008707 380 DFGLSRQAEEDLT-HISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELIS-GKKPVSVEDFGAELNIVHWARSMI 457 (557)
Q Consensus 380 Dfgla~~~~~~~~-~~~~~~~g~~~y~aPE~l~~~~~s~~~DvwslG~ll~ellt-g~~pf~~~~~~~~~~~~~~~~~~~ 457 (557)
|||++........ .......+++.|+|||.+.+..++.++||||||+++|+|++ |..||....... ... .+
T Consensus 190 Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~---~~~----~~ 262 (313)
T 3brb_A 190 DFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQNHE---MYD----YL 262 (313)
T ss_dssp SCSCC----------------CCGGGSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGG---HHH----HH
T ss_pred ecCcceecccccccCcccccCCCccccCchhhcCCCccchhhhHHHHHHHHHHHhcCCCCCccCCHHH---HHH----HH
Confidence 9999987644321 12223447889999999999999999999999999999999 889997543322 111 11
Q ss_pred hcCCccccccccccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhhhhh
Q 008707 458 KKGDVISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKIE 514 (557)
Q Consensus 458 ~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~evl~~L~~~~~~~ 514 (557)
..+..... +...+..+.+++.+||+.+|++|||+.+|++.|+++....
T Consensus 263 ~~~~~~~~---------~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~l~~~l 310 (313)
T 3brb_A 263 LHGHRLKQ---------PEDCLDELYEIMYSCWRTDPLDRPTFSVLRLQLEKLLESL 310 (313)
T ss_dssp HTTCCCCC---------BTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHHC
T ss_pred HcCCCCCC---------CccccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhc
Confidence 12211111 1122347889999999999999999999999999988753
No 129
>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*
Probab=100.00 E-value=7.1e-41 Score=341.18 Aligned_cols=246 Identities=26% Similarity=0.333 Sum_probs=200.3
Q ss_pred HHHhhcccCCCCceEEEEEEEcC-CcEEEEEEccCcc---chhHHHHHHHHHHHhhc-CCCCccceeeEEEecCeeEEEE
Q 008707 236 TNNFCKKIGKGSFGSVYYGKMKD-GKEVAVKIMADSC---SHRTQQFVTEVALLSRI-HHRNLVPLIGYCEEEHQRILVY 310 (557)
Q Consensus 236 ~~~~~~~lG~G~~g~Vy~~~~~~-~~~vavK~~~~~~---~~~~~~~~~E~~il~~l-~h~nIv~~~~~~~~~~~~~lv~ 310 (557)
.|++.+.||+|+||.||+|..+. ++.||+|++.... ....+.+..|..++..+ +||||+++++++.+.+..++||
T Consensus 21 ~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~lv~ 100 (353)
T 2i0e_A 21 DFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVM 100 (353)
T ss_dssp TEEEEEEEEEETTEEEEEEEETTEEEEEEEEEEEHHHHHHTTCHHHHHHHHHHHTCTTCCTTBCCEEEEEECSSEEEEEE
T ss_pred HcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhcchHHHHHHHHHHHHHhcCCCCEEeeEEEEEEcCCEEEEEE
Confidence 45567899999999999998874 7899999987532 23346688899999988 7999999999999999999999
Q ss_pred EecCCCChhhhhhccCCCCCcCHHHHHHHHHHHHHHHHHHHcCCCCCeEeeccCCCCEEeCCCCcEEEecccCccccCCC
Q 008707 311 EYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEED 390 (557)
Q Consensus 311 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfgla~~~~~~ 390 (557)
||++||+|.+++.. ...+++..++.++.||+.||+|||+ +||+||||||+|||++.++.+||+|||++......
T Consensus 101 E~~~gg~L~~~l~~---~~~~~~~~~~~~~~qi~~aL~~LH~---~givHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~ 174 (353)
T 2i0e_A 101 EYVNGGDLMYHIQQ---VGRFKEPHAVFYAAEIAIGLFFLQS---KGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWD 174 (353)
T ss_dssp ECCCSCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCCGGGEEECTTSCEEECCCTTCBCCCCT
T ss_pred eCCCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHH---CCEEeccCCHHHEEEcCCCcEEEEeCCcccccccC
Confidence 99999999999974 3468999999999999999999998 99999999999999999999999999999864322
Q ss_pred CccccccccCCCCccCCcccCCCCCCcccceehhHHHHHHHHhCCCCCCCCCccccccHHHHHHHHHhcCCccccccccc
Q 008707 391 LTHISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPVL 470 (557)
Q Consensus 391 ~~~~~~~~~g~~~y~aPE~l~~~~~s~~~DvwslG~ll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l 470 (557)
.. ......||+.|+|||++.+..++.++|||||||++|||++|+.||...+.. +.... +..+...
T Consensus 175 ~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~------~~~~~-i~~~~~~------- 239 (353)
T 2i0e_A 175 GV-TTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDED------ELFQS-IMEHNVA------- 239 (353)
T ss_dssp TC-CBCCCCSCGGGCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSHH------HHHHH-HHHCCCC-------
T ss_pred Cc-ccccccCCccccChhhhcCCCcCCcccccchHHHHHHHHcCCCCCCCCCHH------HHHHH-HHhCCCC-------
Confidence 22 233456999999999999999999999999999999999999999754321 11111 2222111
Q ss_pred cCCCCHHHHHHHHHHHHHccccCCCCCCC-----HHHHHH
Q 008707 471 IGNVKIESIWRIAEVAIQCVEQRGFSRPK-----MQEIVL 505 (557)
Q Consensus 471 ~~~~~~~~~~~l~~li~~cl~~~P~~RPt-----~~evl~ 505 (557)
++......+.+++.+||+.||++||+ ++||++
T Consensus 240 ---~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~i~~ 276 (353)
T 2i0e_A 240 ---YPKSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKE 276 (353)
T ss_dssp ---CCTTSCHHHHHHHHHHTCSCTTSCTTCSTTHHHHHHT
T ss_pred ---CCCCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhc
Confidence 11122347889999999999999995 466664
No 130
>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}
Probab=100.00 E-value=1.6e-40 Score=350.78 Aligned_cols=244 Identities=25% Similarity=0.373 Sum_probs=201.8
Q ss_pred HHhhcccCCCCceEEEEEEEc-CCcEEEEEEccCcc---chhHHHHHHHHHHHhhcCCCCccceeeEEEecCeeEEEEEe
Q 008707 237 NNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSC---SHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYEY 312 (557)
Q Consensus 237 ~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~lv~e~ 312 (557)
|.+.+.||+|+||.||+|.+. +|+.||||++.... ....+.+.+|+++++.++||||+++++++.+.+..++||||
T Consensus 18 Y~l~~~LG~G~fg~V~~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~lv~E~ 97 (476)
T 2y94_A 18 YILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTPSDIFMVMEY 97 (476)
T ss_dssp EEEEEEEECCSSSCEEEEEETTTCCEEEEEEEEHHHHHHTTTHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred EEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeC
Confidence 456789999999999999876 69999999986432 12346788999999999999999999999999999999999
Q ss_pred cCCCChhhhhhccCCCCCcCHHHHHHHHHHHHHHHHHHHcCCCCCeEeeccCCCCEEeCCCCcEEEecccCccccCCCCc
Q 008707 313 MHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEEDLT 392 (557)
Q Consensus 313 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfgla~~~~~~~~ 392 (557)
+++|+|.+++.. ...+++..+..++.||+.||+|||+ .+|+||||||+|||++.++.+||+|||++........
T Consensus 98 ~~gg~L~~~l~~---~~~l~~~~~~~i~~qi~~aL~~LH~---~givHrDLkp~NIll~~~~~vkL~DFG~a~~~~~~~~ 171 (476)
T 2y94_A 98 VSGGELFDYICK---NGRLDEKESRRLFQQILSGVDYCHR---HMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEF 171 (476)
T ss_dssp CSSEEHHHHTTS---SSSCCHHHHHHHHHHHHHHHHHHHT---TTEECSCCSGGGEEECTTCCEEECCCSSCEECCTTCC
T ss_pred CCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHH---CCCCcccccHHHEEEecCCCeEEEeccchhhcccccc
Confidence 999999999973 4569999999999999999999998 9999999999999999999999999999987654322
Q ss_pred cccccccCCCCccCCcccCCCCC-CcccceehhHHHHHHHHhCCCCCCCCCccccccHHHHHHHHHhcCCcccccccccc
Q 008707 393 HISSVARGTVGYLDPEYYGNQQL-TEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPVLI 471 (557)
Q Consensus 393 ~~~~~~~g~~~y~aPE~l~~~~~-s~~~DvwslG~ll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~ 471 (557)
.....||+.|+|||++.+..+ +.++||||+||++|+|++|+.||...+... + ...+..+...
T Consensus 172 --~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~---~----~~~i~~~~~~-------- 234 (476)
T 2y94_A 172 --LRTSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDHVPT---L----FKKICDGIFY-------- 234 (476)
T ss_dssp --BCCCCSCSTTCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSSCCSSSHH---H----HHHHHTTCCC--------
T ss_pred --ccccCCCcCeEChhhccCCCCCCCcceehhhHHHHHHHhhCCCCCCCCCHHH---H----HHHHhcCCcC--------
Confidence 234468999999999988765 689999999999999999999997443221 1 1122222211
Q ss_pred CCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 008707 472 GNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 505 (557)
Q Consensus 472 ~~~~~~~~~~l~~li~~cl~~~P~~RPt~~evl~ 505 (557)
.+......+.+++.+||+.||++|||++||++
T Consensus 235 --~p~~~s~~~~~Li~~~L~~dP~~Rpt~~eil~ 266 (476)
T 2y94_A 235 --TPQYLNPSVISLLKHMLQVDPMKRATIKDIRE 266 (476)
T ss_dssp --CCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred --CCccCCHHHHHHHHHHcCCCchhCcCHHHHHh
Confidence 01111236889999999999999999999987
No 131
>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}
Probab=100.00 E-value=1.1e-40 Score=338.00 Aligned_cols=275 Identities=24% Similarity=0.388 Sum_probs=197.7
Q ss_pred HHHhhcccCCCCceEEEEEEEcCCcEEEEEEccCccchhHHHHHHHHHH--HhhcCCCCccceeeEEEe-----cCeeEE
Q 008707 236 TNNFCKKIGKGSFGSVYYGKMKDGKEVAVKIMADSCSHRTQQFVTEVAL--LSRIHHRNLVPLIGYCEE-----EHQRIL 308 (557)
Q Consensus 236 ~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~i--l~~l~h~nIv~~~~~~~~-----~~~~~l 308 (557)
.|++.+.||+|+||.||+|.. +++.||||++... ....+..|.++ +..++||||+++++.+.. ....++
T Consensus 14 ~y~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~---~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~~l 89 (336)
T 3g2f_A 14 NLKLLELIGRGRYGAVYKGSL-DERPVAVKVFSFA---NRQNFINEKNIYRVPLMEHDNIARFIVGDERVTADGRMEYLL 89 (336)
T ss_dssp SEEEEEEEEECSSEEEEEEEE-TTEEEEEEEEEGG---GHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECTTSCEEEEE
T ss_pred HhheeeecccCCCeEEEEEEE-CCeEEEEEEeecc---chhhHHHHHHHHHHHhccCcchhhheecccccccCCCceEEE
Confidence 345678999999999999987 4899999998643 23344445554 445799999999986542 335689
Q ss_pred EEEecCCCChhhhhhccCCCCCcCHHHHHHHHHHHHHHHHHHHcCCCC---------CeEeeccCCCCEEeCCCCcEEEe
Q 008707 309 VYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNP---------GIIHRDVKSSNILLDINMRAKVS 379 (557)
Q Consensus 309 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~---------~ivH~dlk~~NIll~~~~~~kl~ 379 (557)
||||+++|+|.+++.. ...++..+..++.||++||+|||+ . +|+||||||+|||++.++.+||+
T Consensus 90 v~e~~~~g~L~~~l~~----~~~~~~~~~~i~~qi~~~L~~LH~---~~~~~~~~~~~ivH~Dikp~Nill~~~~~~kL~ 162 (336)
T 3g2f_A 90 VMEYYPNGSLXKYLSL----HTSDWVSSCRLAHSVTRGLAYLHT---ELPRGDHYKPAISHRDLNSRNVLVKNDGTCVIS 162 (336)
T ss_dssp EECCCTTCBHHHHHHH----CCBCHHHHHHHHHHHHHHHHHHHC---CBCCGGGCBCCEECSSCSGGGEEECTTSCEEEC
T ss_pred EEecCCCCcHHHHHhh----cccchhHHHHHHHHHHHHHHHHHh---hhccccccccceeecccccceEEEcCCCcEEEe
Confidence 9999999999999974 345888999999999999999998 7 99999999999999999999999
Q ss_pred cccCccccCCCCc-------cccccccCCCCccCCcccCC-------CCCCcccceehhHHHHHHHHhCCCCCCCCCccc
Q 008707 380 DFGLSRQAEEDLT-------HISSVARGTVGYLDPEYYGN-------QQLTEKSDVYSFGVVLLELISGKKPVSVEDFGA 445 (557)
Q Consensus 380 Dfgla~~~~~~~~-------~~~~~~~g~~~y~aPE~l~~-------~~~s~~~DvwslG~ll~elltg~~pf~~~~~~~ 445 (557)
|||++........ .......||+.|+|||++.+ ..++.++|||||||++|||++|..||.......
T Consensus 163 DFG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~~ 242 (336)
T 3g2f_A 163 DFGLSMRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLFPGESVP 242 (336)
T ss_dssp CCTTCEECSSSSCC---------CCTTSCGGGCCHHHHTTCCCGGGHHHHHHHHHHHHHHHHHHHHHTTBGGGSTTSCCC
T ss_pred eccceeecccccccCccccccccccCCCccceeCchhhcCCcccccccccccccchHHHHHHHHHHHhcCCcCCCccchh
Confidence 9999987643221 11223458999999999987 456679999999999999999977764332211
Q ss_pred c-ccH----------HHHHHHHHhcCCccccccccccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhhhhh
Q 008707 446 E-LNI----------VHWARSMIKKGDVISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKIE 514 (557)
Q Consensus 446 ~-~~~----------~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~evl~~L~~~~~~~ 514 (557)
. ... ................+.... ......+..+.+++.+||+.||++|||++|+++.|+++...-
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~li~~cl~~dP~~Rps~~e~l~~L~~ll~~~ 320 (336)
T 3g2f_A 243 EYQMAFQTEVGNHPTFEDMQVLVSREKQRPKFPEAW--KENSLAVRSLKETIEDCWDQDAEARLTAQXAEERMAELMMIW 320 (336)
T ss_dssp CCCCTTHHHHCSSCCHHHHHHHHTTSCCCCCCCTTC--CCCSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHCC
T ss_pred HHHHhhhcccCCCchHHHHHhhhcccccCCCCCccc--ccccchHHHHHHHHHHHhcCChhhCcchHHHHHHHHHHHHHH
Confidence 1 100 011111111111111111000 112245667999999999999999999999999999999876
Q ss_pred cCCCCcccc
Q 008707 515 KGGDQKFSS 523 (557)
Q Consensus 515 ~~~~~~~~~ 523 (557)
.....+.+.
T Consensus 321 ~~~~~~~~~ 329 (336)
T 3g2f_A 321 ERNKSVSPT 329 (336)
T ss_dssp CC-------
T ss_pred HhcccCCCc
Confidence 666544443
No 132
>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=3.2e-40 Score=335.95 Aligned_cols=256 Identities=25% Similarity=0.294 Sum_probs=197.6
Q ss_pred HHHHHhhcccCCCCceEEEEEEEc-CCcEEEEEEccCc-----cchhHHHHHHHHHHHhhcCCCCccceeeEEEecCeeE
Q 008707 234 EATNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADS-----CSHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRI 307 (557)
Q Consensus 234 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~-----~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~ 307 (557)
...|++.+.||+|+||.||+|... +++.||+|++... .....+.+.+|+++++.++||||+++++++.+.+..+
T Consensus 25 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~ 104 (345)
T 3hko_A 25 QKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARLYEVYEDEQYIC 104 (345)
T ss_dssp HHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHC---CHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred hhheeecceeeecCCeEEEEEEECCCCceEEEeehhhhhhcccCHHHHHHHHHHHHHHHhCCCCCcceeehhhccCCeEE
Confidence 355667899999999999999875 5889999998643 2344578999999999999999999999999999999
Q ss_pred EEEEecCCCChhhhhhccC-------------------------------------CCCCcCHHHHHHHHHHHHHHHHHH
Q 008707 308 LVYEYMHNGTLRDRLHGSV-------------------------------------NQKPLDWLTRLQIAHDAAKGLEYL 350 (557)
Q Consensus 308 lv~e~~~~gsL~~~l~~~~-------------------------------------~~~~l~~~~~~~i~~qia~aL~~L 350 (557)
+||||+++|+|.+++.... ....+++..++.++.||+.||+||
T Consensus 105 lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~L 184 (345)
T 3hko_A 105 LVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSALHYL 184 (345)
T ss_dssp EEEECCCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHHHSCC--CEEECCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEeCCCCCcHHHHHHHhhcccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHH
Confidence 9999999999999885211 012345677889999999999999
Q ss_pred HcCCCCCeEeeccCCCCEEeCCCC--cEEEecccCccccCCCC---ccccccccCCCCccCCcccCC--CCCCcccceeh
Q 008707 351 HTGCNPGIIHRDVKSSNILLDINM--RAKVSDFGLSRQAEEDL---THISSVARGTVGYLDPEYYGN--QQLTEKSDVYS 423 (557)
Q Consensus 351 H~~~~~~ivH~dlk~~NIll~~~~--~~kl~Dfgla~~~~~~~---~~~~~~~~g~~~y~aPE~l~~--~~~s~~~Dvws 423 (557)
|+ .+|+||||||+||+++.++ .+||+|||++....... ........||+.|+|||.+.+ ..++.++||||
T Consensus 185 H~---~~ivH~Dlkp~NIll~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~Diws 261 (345)
T 3hko_A 185 HN---QGICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKCDAWS 261 (345)
T ss_dssp HH---TTEECCCCCGGGEEESCSSSCCEEECCCTTCEEGGGTTCC--------CCCGGGCCHHHHTCSSSCCCTHHHHHH
T ss_pred HH---CCccccCCChhhEEEecCCCceEEEeeccccccccccCccccccccccCCCccccCchhhccCCCCCCcHHHHHH
Confidence 98 8999999999999998776 89999999998653321 112234458999999999975 67889999999
Q ss_pred hHHHHHHHHhCCCCCCCCCccccccHHHHHHHHHhcCCccccccccccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHH
Q 008707 424 FGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEI 503 (557)
Q Consensus 424 lG~ll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~ev 503 (557)
||+++|||++|+.||...... +............. .+. . ......+.+++.+||+.+|.+|||+.|+
T Consensus 262 lG~il~el~~g~~pf~~~~~~------~~~~~~~~~~~~~~--~~~-~----~~~~~~~~~li~~~l~~~p~~Rps~~~~ 328 (345)
T 3hko_A 262 AGVLLHLLLMGAVPFPGVNDA------DTISQVLNKKLCFE--NPN-Y----NVLSPLARDLLSNLLNRNVDERFDAMRA 328 (345)
T ss_dssp HHHHHHHHHHSSCSSCCSSHH------HHHHHHHHCCCCTT--SGG-G----GGSCHHHHHHHHHHSCSCTTTSCCHHHH
T ss_pred HHHHHHHHHHCCCCCCCCChH------HHHHHHHhcccccC--Ccc-c----ccCCHHHHHHHHHHcCCChhHCCCHHHH
Confidence 999999999999999744322 11222222211110 000 0 1123468899999999999999999999
Q ss_pred HH
Q 008707 504 VL 505 (557)
Q Consensus 504 l~ 505 (557)
++
T Consensus 329 l~ 330 (345)
T 3hko_A 329 LQ 330 (345)
T ss_dssp HH
T ss_pred hc
Confidence 87
No 133
>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...
Probab=100.00 E-value=3.3e-41 Score=339.88 Aligned_cols=261 Identities=24% Similarity=0.417 Sum_probs=210.3
Q ss_pred HHHHHhhcccCCCCceEEEEEEEc------CCcEEEEEEccCccc-hhHHHHHHHHHHHhhcCCCCccceeeEEEecCee
Q 008707 234 EATNNFCKKIGKGSFGSVYYGKMK------DGKEVAVKIMADSCS-HRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQR 306 (557)
Q Consensus 234 ~~~~~~~~~lG~G~~g~Vy~~~~~------~~~~vavK~~~~~~~-~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~ 306 (557)
...|++.+.||+|+||.||+|.+. +++.||+|++..... .....+.+|+++++.++||||+++++++.+.+..
T Consensus 24 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~ 103 (322)
T 1p4o_A 24 REKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPT 103 (322)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCCTTBCCEEEEECSSSSC
T ss_pred hhheeeeeEeccCCceEEEeeeecCccCCCCceEEEEEecccccCHHHHHHHHHHHHHHHhcCCCCEeeeEEEEccCCcc
Confidence 345667899999999999999765 367899999875433 3456789999999999999999999999999999
Q ss_pred EEEEEecCCCChhhhhhccC-------CCCCcCHHHHHHHHHHHHHHHHHHHcCCCCCeEeeccCCCCEEeCCCCcEEEe
Q 008707 307 ILVYEYMHNGTLRDRLHGSV-------NQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVS 379 (557)
Q Consensus 307 ~lv~e~~~~gsL~~~l~~~~-------~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~ 379 (557)
++||||+++|+|.+++.... ....+++..++.++.|++.||+|||+ ++++||||||+||+++.++.+||+
T Consensus 104 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~---~~i~H~dikp~NIli~~~~~~kl~ 180 (322)
T 1p4o_A 104 LVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNA---NKFVHRDLAARNCMVAEDFTVKIG 180 (322)
T ss_dssp EEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHH---TTCBCSCCSGGGEEECTTCCEEEC
T ss_pred EEEEEeCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHHHHHH---CCCccCCCccceEEEcCCCeEEEC
Confidence 99999999999999987532 12457899999999999999999998 999999999999999999999999
Q ss_pred cccCccccCCCCc-cccccccCCCCccCCcccCCCCCCcccceehhHHHHHHHHh-CCCCCCCCCccccccHHHHHHHHH
Q 008707 380 DFGLSRQAEEDLT-HISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELIS-GKKPVSVEDFGAELNIVHWARSMI 457 (557)
Q Consensus 380 Dfgla~~~~~~~~-~~~~~~~g~~~y~aPE~l~~~~~s~~~DvwslG~ll~ellt-g~~pf~~~~~~~~~~~~~~~~~~~ 457 (557)
|||++........ .......+++.|+|||.+.+..++.++||||||+++|+|++ |..||...+.. + ....+
T Consensus 181 Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~------~-~~~~~ 253 (322)
T 1p4o_A 181 DFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNE------Q-VLRFV 253 (322)
T ss_dssp CTTCCCGGGGGGCEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCHH------H-HHHHH
T ss_pred cCccccccccccccccccCCCCCCCccChhhhccCCCCchhhHHHHHHHHHHHHhcCCCccccCCHH------H-HHHHH
Confidence 9999986543322 11223346889999999998889999999999999999999 89999743321 1 11222
Q ss_pred hcCCccccccccccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhhhh
Q 008707 458 KKGDVISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKI 513 (557)
Q Consensus 458 ~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~evl~~L~~~~~~ 513 (557)
..+..... ....+..+.+++.+||+.+|++|||+.|+++.|++....
T Consensus 254 ~~~~~~~~---------~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~~L~~~~~~ 300 (322)
T 1p4o_A 254 MEGGLLDK---------PDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEMEP 300 (322)
T ss_dssp HTTCCCCC---------CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHGGGSCT
T ss_pred HcCCcCCC---------CCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHhhcc
Confidence 22222111 112234688999999999999999999999999988664
No 134
>2eue_A Carbon catabolite derepressing protein kinase; kinase domain; 2.20A {Saccharomyces cerevisiae} PDB: 3fam_A 3hyh_A 3dae_A 2fh9_A 3mn3_A
Probab=100.00 E-value=9.5e-41 Score=328.78 Aligned_cols=243 Identities=24% Similarity=0.355 Sum_probs=178.3
Q ss_pred HHhhcccCCCCceEEEEEEEc-CCcEEEEEEccCcc---chhHHHHHHHHHHHhhcCCCCccceeeEEEecCeeEEEEEe
Q 008707 237 NNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSC---SHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYEY 312 (557)
Q Consensus 237 ~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~lv~e~ 312 (557)
|++.+.||+|+||.||+|.+. +++.||+|++.... ....+.+.+|+++++.++||||+++++++.+.+..++||||
T Consensus 15 y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 94 (275)
T 2eue_A 15 YQIVKTLGEGSFAKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVIEY 94 (275)
T ss_dssp BCCCC---------EEEEECTTTCCEEEEEEECSCC-----CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSCEEEEEEC
T ss_pred eEEEEEEEcCCCEEEEEEEECCCCCEEEEEEEEhhhcchHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCeEEEEehh
Confidence 445689999999999999865 68999999986542 22356788999999999999999999999999999999999
Q ss_pred cCCCChhhhhhccCCCCCcCHHHHHHHHHHHHHHHHHHHcCCCCCeEeeccCCCCEEeCCCCcEEEecccCccccCCCCc
Q 008707 313 MHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEEDLT 392 (557)
Q Consensus 313 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfgla~~~~~~~~ 392 (557)
+ +++|.+.+.. ...+++..+..++.|++.||+|||+ .|++||||||+||+++.++.+||+|||++........
T Consensus 95 ~-~~~l~~~~~~---~~~~~~~~~~~~~~~i~~~l~~LH~---~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 167 (275)
T 2eue_A 95 A-GNELFDYIVQ---RDKMSEQEARRFFQQIISAVEYCHR---HKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNF 167 (275)
T ss_dssp C-CEEHHHHHHT---SSSCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCSGGGEEECTTSCEEECCSSCC--------
T ss_pred c-CCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHH---CCCeeccCChHhEEECCCCCEEEeecccceeccCccc
Confidence 9 7788888763 4568999999999999999999998 9999999999999999999999999999976644322
Q ss_pred cccccccCCCCccCCcccCCCCC-CcccceehhHHHHHHHHhCCCCCCCCCccccccHHHHHHHHHhcCCcccccccccc
Q 008707 393 HISSVARGTVGYLDPEYYGNQQL-TEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPVLI 471 (557)
Q Consensus 393 ~~~~~~~g~~~y~aPE~l~~~~~-s~~~DvwslG~ll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~ 471 (557)
.....||+.|+|||.+.+..+ +.++||||+|+++|+|++|+.||....... ....+..+...
T Consensus 168 --~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~-------~~~~~~~~~~~-------- 230 (275)
T 2eue_A 168 --LKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPV-------LFKNISNGVYT-------- 230 (275)
T ss_dssp ---------CTTCCHHHHCC-----THHHHHHHHHHHHHHHHSSCSSCCSSHHH-------HHHHHHHTCCC--------
T ss_pred --ccCCCCCcCcCCceeeeCCCCCCcccchHHHHHHHHHHHhCCCCCCCCCHHH-------HHHHHHhCCCC--------
Confidence 223358999999999988765 789999999999999999999997443211 11112222110
Q ss_pred CCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 008707 472 GNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 505 (557)
Q Consensus 472 ~~~~~~~~~~l~~li~~cl~~~P~~RPt~~evl~ 505 (557)
.+......+.+++.+||+.||++|||++|+++
T Consensus 231 --~~~~~~~~~~~li~~~l~~dP~~Rps~~e~l~ 262 (275)
T 2eue_A 231 --LPKFLSPGAAGLIKRMLIVNPLNRISIHEIMQ 262 (275)
T ss_dssp --CCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred --CCccCCHHHHHHHHHHhhcCHhHCCCHHHHhh
Confidence 11112336889999999999999999999975
No 135
>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}
Probab=100.00 E-value=2.2e-40 Score=334.61 Aligned_cols=265 Identities=28% Similarity=0.442 Sum_probs=210.5
Q ss_pred HHHHhhcccCCCCceEEEEEEE-----cCCcEEEEEEccCccchhHHHHHHHHHHHhhcCCCCccceeeEEEecC--eeE
Q 008707 235 ATNNFCKKIGKGSFGSVYYGKM-----KDGKEVAVKIMADSCSHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEH--QRI 307 (557)
Q Consensus 235 ~~~~~~~~lG~G~~g~Vy~~~~-----~~~~~vavK~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~--~~~ 307 (557)
..+++.+.||+|+||.||+|.+ .+++.||+|++........+.+.+|+++++.++||||+++++++...+ ..+
T Consensus 41 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 120 (326)
T 2w1i_A 41 RHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLK 120 (326)
T ss_dssp GGEEEEEEEECCSSEEEEEEEECTTSSSCCEEEEEEEESSCCSHHHHHHHHHHHHHHTCCCTTBCCEEEEECC----CCE
T ss_pred HHceeeeeeccCCCeEEEEEEeccccCCCceEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEEecCCCceE
Confidence 3455678999999999999984 358899999998766666778999999999999999999999986644 689
Q ss_pred EEEEecCCCChhhhhhccCCCCCcCHHHHHHHHHHHHHHHHHHHcCCCCCeEeeccCCCCEEeCCCCcEEEecccCcccc
Q 008707 308 LVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQA 387 (557)
Q Consensus 308 lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfgla~~~ 387 (557)
+||||+++++|.+++... ...+++..++.++.|+++||+|||+ .+++||||||+||+++.++.+||+|||++...
T Consensus 121 lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~dikp~NIli~~~~~~kL~Dfg~~~~~ 195 (326)
T 2w1i_A 121 LIMEYLPYGSLRDYLQKH--KERIDHIKLLQYTSQICKGMEYLGT---KRYIHRDLATRNILVENENRVKIGDFGLTKVL 195 (326)
T ss_dssp EEECCCTTCBHHHHHHHS--TTSSCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGGGEEEEETTEEEECCCTTCEEC
T ss_pred EEEECCCCCCHHHHHHhc--ccCCCHHHHHHHHHHHHHHHHHHHh---CCEeccCCCcceEEEcCCCcEEEecCcchhhc
Confidence 999999999999999753 3568999999999999999999998 99999999999999999999999999999876
Q ss_pred CCCCcc--ccccccCCCCccCCcccCCCCCCcccceehhHHHHHHHHhCCCCCCCCCcc---------ccccHHHHHHHH
Q 008707 388 EEDLTH--ISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFG---------AELNIVHWARSM 456 (557)
Q Consensus 388 ~~~~~~--~~~~~~g~~~y~aPE~l~~~~~s~~~DvwslG~ll~elltg~~pf~~~~~~---------~~~~~~~~~~~~ 456 (557)
...... ......++..|+|||.+.+..++.++||||||+++|+|+||..||...... ........+...
T Consensus 196 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 275 (326)
T 2w1i_A 196 PQDKEYYKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIEL 275 (326)
T ss_dssp CSSCSEEECSSCCSCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHHTTCGGGSHHHHHHHHHCTTCCTHHHHHHHHHH
T ss_pred cccccccccccCCCCceeEECchhhcCCCCCchhhHHHHHHHHHHHHhcCCCCCCCHHHHHHhhccccchhhhHHHHHHH
Confidence 544321 122334677899999999888999999999999999999999998632110 000111112222
Q ss_pred HhcCCccccccccccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhhhh
Q 008707 457 IKKGDVISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKI 513 (557)
Q Consensus 457 ~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~evl~~L~~~~~~ 513 (557)
+..+.... .+...+..+.+++.+||+.+|++|||+.||++.|+++.+.
T Consensus 276 ~~~~~~~~---------~~~~~~~~l~~li~~cl~~dP~~Rps~~el~~~L~~l~~~ 323 (326)
T 2w1i_A 276 LKNNGRLP---------RPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDQ 323 (326)
T ss_dssp HHTTCCCC---------CCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred hhcCCCCC---------CCCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHH
Confidence 22221111 1112234788999999999999999999999999998764
No 136
>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}
Probab=100.00 E-value=2.5e-40 Score=336.68 Aligned_cols=248 Identities=23% Similarity=0.330 Sum_probs=193.6
Q ss_pred HHhhcccCCCCceEEEEEEEcCCcEEEEEEccCcc--chhHHHHHHHHHHHhhcCC--CCccceeeEEEecCeeEEEEEe
Q 008707 237 NNFCKKIGKGSFGSVYYGKMKDGKEVAVKIMADSC--SHRTQQFVTEVALLSRIHH--RNLVPLIGYCEEEHQRILVYEY 312 (557)
Q Consensus 237 ~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~il~~l~h--~nIv~~~~~~~~~~~~~lv~e~ 312 (557)
|++.+.||+|+||.||++...+++.||+|++.... ....+.+.+|+++++.++| |||+++++++.+++..++|||
T Consensus 11 y~i~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~e- 89 (343)
T 3dbq_A 11 YSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVME- 89 (343)
T ss_dssp EEEEEEESCCSSEEEEEEECTTSCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEEC-
T ss_pred EEEEEEEecCCCeEEEEEEeCCCCEEEEEEeeccccchHHHHHHHHHHHHHHhhhhcCCceEEEeeeEeeCCEEEEEEe-
Confidence 45678999999999999999889999999986432 3345678999999999976 999999999999999999999
Q ss_pred cCCCChhhhhhccCCCCCcCHHHHHHHHHHHHHHHHHHHcCCCCCeEeeccCCCCEEeCCCCcEEEecccCccccCCCCc
Q 008707 313 MHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEEDLT 392 (557)
Q Consensus 313 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfgla~~~~~~~~ 392 (557)
+.+++|.+++.. ...+++..+..++.||+.||+|||+ .+|+||||||+|||++ ++.+||+|||++........
T Consensus 90 ~~~~~L~~~l~~---~~~~~~~~~~~i~~qi~~al~~lH~---~~iiHrDikp~NIll~-~~~~kl~DFG~a~~~~~~~~ 162 (343)
T 3dbq_A 90 CGNIDLNSWLKK---KKSIDPWERKSYWKNMLEAVHTIHQ---HGIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDTT 162 (343)
T ss_dssp CCSEEHHHHHHH---SCCCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEEE-TTEEEECCCSSSCCC-----
T ss_pred CCCCCHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCcceEEEE-CCcEEEeecccccccCcccc
Confidence 558899999984 4568999999999999999999998 9999999999999997 67899999999987654332
Q ss_pred c-ccccccCCCCccCCcccCC-----------CCCCcccceehhHHHHHHHHhCCCCCCCCCccccccHHHHHHHHHhcC
Q 008707 393 H-ISSVARGTVGYLDPEYYGN-----------QQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKG 460 (557)
Q Consensus 393 ~-~~~~~~g~~~y~aPE~l~~-----------~~~s~~~DvwslG~ll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~ 460 (557)
. ......||+.|+|||++.+ ..++.++|||||||++|+|++|+.||..... ........+...
T Consensus 163 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~-----~~~~~~~~~~~~ 237 (343)
T 3dbq_A 163 SVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIIN-----QISKLHAIIDPN 237 (343)
T ss_dssp -------CCCCSSCCHHHHHHCC-----------CCHHHHHHHHHHHHHHHHHSSCTTTTCCS-----HHHHHHHHHCTT
T ss_pred cccCCCCcCCcCcCCHHHHhhccccccccccccCCCchhhHHHHHHHHHHHHhCCCcchhhhh-----HHHHHHHHhcCC
Confidence 2 2234468999999999854 6788999999999999999999999973211 111122222111
Q ss_pred CccccccccccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 008707 461 DVISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLA 506 (557)
Q Consensus 461 ~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~evl~~ 506 (557)
.. ...+......+.+++.+||+.||.+|||+.|+++.
T Consensus 238 ~~---------~~~~~~~~~~l~~li~~~L~~dp~~Rpt~~e~l~h 274 (343)
T 3dbq_A 238 HE---------IEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAH 274 (343)
T ss_dssp SC---------CCCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred cc---------cCCcccCCHHHHHHHHHHcCCChhHCCCHHHHHhC
Confidence 11 11111122468899999999999999999999875
No 137
>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}
Probab=100.00 E-value=1.4e-40 Score=339.27 Aligned_cols=248 Identities=23% Similarity=0.320 Sum_probs=186.8
Q ss_pred HHHhhcccCCCCceEEEEEEEc-CCcEEEEEEccCccchhHHHHHHHHHHHhhcCCCCccceeeEEEecCeeEEEEEecC
Q 008707 236 TNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCSHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYEYMH 314 (557)
Q Consensus 236 ~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~lv~e~~~ 314 (557)
.|++.+.||+|+||.||+|... +++.||+|++.... ..+.+.+|++++++++||||+++++++.+.+..++||||++
T Consensus 54 ~y~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 131 (349)
T 2w4o_A 54 FFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTV--DKKIVRTEIGVLLRLSHPNIIKLKEIFETPTEISLVLELVT 131 (349)
T ss_dssp TEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEC------------CHHHHHCCCTTBCCEEEEEECSSEEEEEECCCC
T ss_pred cEEEeeEEeeCCCEEEEEEEECCCCcEEEEEEeccch--hHHHHHHHHHHHHhCCCCCCcceeeeEecCCeEEEEEEeCC
Confidence 4556789999999999999887 47899999987542 34568899999999999999999999999999999999999
Q ss_pred CCChhhhhhccCCCCCcCHHHHHHHHHHHHHHHHHHHcCCCCCeEeeccCCCCEEeCC---CCcEEEecccCccccCCCC
Q 008707 315 NGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDI---NMRAKVSDFGLSRQAEEDL 391 (557)
Q Consensus 315 ~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~dlk~~NIll~~---~~~~kl~Dfgla~~~~~~~ 391 (557)
+|+|.+++.. ...+++..+..++.|++.||+|||+ .+|+||||||+||+++. ++.+||+|||++.......
T Consensus 132 ~~~L~~~l~~---~~~~~~~~~~~i~~qi~~~L~~LH~---~~ivH~Dikp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~ 205 (349)
T 2w4o_A 132 GGELFDRIVE---KGYYSERDAADAVKQILEAVAYLHE---NGIVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQV 205 (349)
T ss_dssp SCBHHHHHTT---CSSCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEESSSSTTCCEEECCCC---------
T ss_pred CCCHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHH---CCeEecCCCcccEEEecCCCCCCEEEccCccccccCccc
Confidence 9999999873 4568999999999999999999998 99999999999999975 8899999999998764332
Q ss_pred ccccccccCCCCccCCcccCCCCCCcccceehhHHHHHHHHhCCCCCCCCCccccccHHHHHHHHHhcCCcccccccccc
Q 008707 392 THISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPVLI 471 (557)
Q Consensus 392 ~~~~~~~~g~~~y~aPE~l~~~~~s~~~DvwslG~ll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~ 471 (557)
. .....||+.|+|||++.+..++.++|||||||++|||++|+.||....... .....+..+... ...
T Consensus 206 ~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~------~~~~~i~~~~~~-~~~---- 272 (349)
T 2w4o_A 206 L--MKTVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFYDERGDQ------FMFRRILNCEYY-FIS---- 272 (349)
T ss_dssp ---------CGGGSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCTTCHH------HHHHHHHTTCCC-CCT----
T ss_pred c--cccccCCCCccCHHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCcccH------HHHHHHHhCCCc-cCC----
Confidence 1 223458999999999999999999999999999999999999997433211 111112222111 000
Q ss_pred CCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 008707 472 GNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 505 (557)
Q Consensus 472 ~~~~~~~~~~l~~li~~cl~~~P~~RPt~~evl~ 505 (557)
......+..+.+++.+||+.||++|||+.|+++
T Consensus 273 -~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 305 (349)
T 2w4o_A 273 -PWWDEVSLNAKDLVRKLIVLDPKKRLTTFQALQ 305 (349)
T ss_dssp -TTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred -chhhhCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 011122347889999999999999999999986
No 138
>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...
Probab=100.00 E-value=1.3e-40 Score=334.38 Aligned_cols=263 Identities=27% Similarity=0.424 Sum_probs=210.1
Q ss_pred HHHHhhcccCCCCceEEEEEEEc------CCcEEEEEEccCccc-hhHHHHHHHHHHHhhc-CCCCccceeeEEEecC-e
Q 008707 235 ATNNFCKKIGKGSFGSVYYGKMK------DGKEVAVKIMADSCS-HRTQQFVTEVALLSRI-HHRNLVPLIGYCEEEH-Q 305 (557)
Q Consensus 235 ~~~~~~~~lG~G~~g~Vy~~~~~------~~~~vavK~~~~~~~-~~~~~~~~E~~il~~l-~h~nIv~~~~~~~~~~-~ 305 (557)
..|++.+.||+|+||.||+|.+. +++.||+|++..... ...+.+.+|++++.++ +||||+++++++...+ .
T Consensus 27 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~ 106 (316)
T 2xir_A 27 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGP 106 (316)
T ss_dssp GGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECCTTSC
T ss_pred hheeeeeEEcCCCceeEEEEEEecCCccccceEEEEEecccCCCcHHHHHHHHHHHHHHhcccCCCeeeEEEEEecCCCc
Confidence 44567899999999999999752 468899999876433 3456789999999999 7999999999987754 5
Q ss_pred eEEEEEecCCCChhhhhhccCC-------------CCCcCHHHHHHHHHHHHHHHHHHHcCCCCCeEeeccCCCCEEeCC
Q 008707 306 RILVYEYMHNGTLRDRLHGSVN-------------QKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDI 372 (557)
Q Consensus 306 ~~lv~e~~~~gsL~~~l~~~~~-------------~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~dlk~~NIll~~ 372 (557)
.++||||+++|+|.+++..... ...+++..++.++.|+++||+|||+ .+++||||||+||+++.
T Consensus 107 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~---~~i~H~dikp~Nil~~~ 183 (316)
T 2xir_A 107 LMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLAS---RKCIHRDLAARNILLSE 183 (316)
T ss_dssp CEEEEECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEECG
T ss_pred eEEEEEcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHHHHHh---CCcccccCccceEEECC
Confidence 8999999999999999975421 1238899999999999999999998 99999999999999999
Q ss_pred CCcEEEecccCccccCCCCc-cccccccCCCCccCCcccCCCCCCcccceehhHHHHHHHHh-CCCCCCCCCccccccHH
Q 008707 373 NMRAKVSDFGLSRQAEEDLT-HISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELIS-GKKPVSVEDFGAELNIV 450 (557)
Q Consensus 373 ~~~~kl~Dfgla~~~~~~~~-~~~~~~~g~~~y~aPE~l~~~~~s~~~DvwslG~ll~ellt-g~~pf~~~~~~~~~~~~ 450 (557)
++.+||+|||++........ .......+|+.|+|||.+.+..++.++||||||+++|+|+| |..||........
T Consensus 184 ~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~~---- 259 (316)
T 2xir_A 184 KNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEE---- 259 (316)
T ss_dssp GGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCCSHH----
T ss_pred CCCEEECCCccccccccCccceeccCCCcceeecCchhhccccccchhHHHHHHHHHHHHHhCCCCCCcccchhHH----
Confidence 99999999999987644322 22233457889999999998899999999999999999998 9999975433211
Q ss_pred HHHHHHHhcCCccccccccccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhhhhhc
Q 008707 451 HWARSMIKKGDVISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKIEK 515 (557)
Q Consensus 451 ~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~evl~~L~~~~~~~~ 515 (557)
....+..+..... +...+..+.+++.+||+.||.+|||+.||++.|+.+.+...
T Consensus 260 --~~~~~~~~~~~~~---------~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~~ 313 (316)
T 2xir_A 260 --FCRRLKEGTRMRA---------PDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQANA 313 (316)
T ss_dssp --HHHHHHHTCCCCC---------CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHC
T ss_pred --HHHHhccCccCCC---------CCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhhhc
Confidence 1122222221111 11123468899999999999999999999999999987654
No 139
>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}
Probab=100.00 E-value=2.1e-40 Score=339.42 Aligned_cols=262 Identities=24% Similarity=0.282 Sum_probs=202.4
Q ss_pred HHHHHHHHhhcccCCCCceEEEEEEEc-CCcEEEEEEccCccchhHHHHHHHHHHHhhcC-----CCCccceeeEEEecC
Q 008707 231 ELEEATNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCSHRTQQFVTEVALLSRIH-----HRNLVPLIGYCEEEH 304 (557)
Q Consensus 231 ~~~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~il~~l~-----h~nIv~~~~~~~~~~ 304 (557)
++....|++.+.||+|+||.||+|.+. +++.||||++... ....+.+..|+++++.++ ||||+++++++...+
T Consensus 31 ~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~h~~iv~~~~~~~~~~ 109 (360)
T 3llt_A 31 MLLNNAFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNI-KKYTRSAKIEADILKKIQNDDINNNNIVKYHGKFMYYD 109 (360)
T ss_dssp CEETTTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSC-HHHHHHHHHHHHHHHHTCCCSTTGGGBCCEEEEEEETT
T ss_pred eEecCEEEEEEEEcccCCeEEEEEEECCCCeEEEEEEeccc-hhhhhhhHHHHHHHHHhcccCCCCCCeecccceeeECC
Confidence 333456677899999999999999874 6889999998743 334566788999999996 999999999999999
Q ss_pred eeEEEEEecCCCChhhhhhccCCCCCcCHHHHHHHHHHHHHHHHHHHcCCCCCeEeeccCCCCEEeCC------------
Q 008707 305 QRILVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDI------------ 372 (557)
Q Consensus 305 ~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~dlk~~NIll~~------------ 372 (557)
..++||||+ +++|.+++... ....+++..+..++.||+.||+|||+ .+|+||||||+|||++.
T Consensus 110 ~~~lv~e~~-~~~L~~~~~~~-~~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivHrDlkp~NIll~~~~~~~~~~~~~~ 184 (360)
T 3llt_A 110 HMCLIFEPL-GPSLYEIITRN-NYNGFHIEDIKLYCIEILKALNYLRK---MSLTHTDLKPENILLDDPYFEKSLITVRR 184 (360)
T ss_dssp EEEEEECCC-CCBHHHHHHHT-TTCCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEESCTTCCEEEEEEEC
T ss_pred eeEEEEcCC-CCCHHHHHHhc-CCCCCCHHHHHHHHHHHHHHHHHHHH---CCeeeCCCCcccEEEccccccccccchhc
Confidence 999999999 99999999754 23468999999999999999999998 99999999999999975
Q ss_pred -------------CCcEEEecccCccccCCCCccccccccCCCCccCCcccCCCCCCcccceehhHHHHHHHHhCCCCCC
Q 008707 373 -------------NMRAKVSDFGLSRQAEEDLTHISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVS 439 (557)
Q Consensus 373 -------------~~~~kl~Dfgla~~~~~~~~~~~~~~~g~~~y~aPE~l~~~~~s~~~DvwslG~ll~elltg~~pf~ 439 (557)
++.+||+|||++....... ....||+.|+|||++.+..++.++|||||||++|+|++|+.||.
T Consensus 185 ~~~~~~~~~~~~~~~~~kl~DFG~a~~~~~~~----~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~ 260 (360)
T 3llt_A 185 VTDGKKIQIYRTKSTGIKLIDFGCATFKSDYH----GSIINTRQYRAPEVILNLGWDVSSDMWSFGCVLAELYTGSLLFR 260 (360)
T ss_dssp TTTCCEEEEEEESCCCEEECCCTTCEETTSCC----CSCCSCGGGCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSCC
T ss_pred ccccccccccccCCCCEEEEeccCceecCCCC----cCccCcccccCcHHHcCCCCCCccchHHHHHHHHHHHHCCCCCC
Confidence 7889999999998654322 23458999999999999999999999999999999999999998
Q ss_pred CCCccccccHHHHHHHHHhc-----------CCcccccccc-cc---C-C-CCHH---------------HHHHHHHHHH
Q 008707 440 VEDFGAELNIVHWARSMIKK-----------GDVISIVDPV-LI---G-N-VKIE---------------SIWRIAEVAI 487 (557)
Q Consensus 440 ~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~d~~-l~---~-~-~~~~---------------~~~~l~~li~ 487 (557)
..+..+.... +...... ......++.. .. + . .... ....+.+++.
T Consensus 261 ~~~~~~~~~~---~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 337 (360)
T 3llt_A 261 THEHMEHLAM---MESIIQPIPKNMLYEATKTNGSKYVNKDELKLAWPENASSINSIKHVKKCLPLYKIIKHELFCDFLY 337 (360)
T ss_dssp CSSHHHHHHH---HHHHTCCCCHHHHHHHTTSGGGGGEETTTTEECTTTTCSCHHHHHHHHTCCCHHHHCCCHHHHHHHH
T ss_pred CCcHHHHHHH---HHHhcCCCCHHHHhhhhhccCccccCcccceecCcccccchhhhhhhhhcccccccchHHHHHHHHH
Confidence 5443221111 1111100 0000000000 00 0 0 0000 1146779999
Q ss_pred HccccCCCCCCCHHHHHH
Q 008707 488 QCVEQRGFSRPKMQEIVL 505 (557)
Q Consensus 488 ~cl~~~P~~RPt~~evl~ 505 (557)
+||+.||++|||++|+++
T Consensus 338 ~~L~~dP~~Rpta~elL~ 355 (360)
T 3llt_A 338 SILQIDPTLRPSPAELLK 355 (360)
T ss_dssp HHCCSSGGGSCCHHHHTT
T ss_pred HHhcCChhhCCCHHHHhc
Confidence 999999999999999975
No 140
>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00 E-value=2.7e-40 Score=360.93 Aligned_cols=252 Identities=25% Similarity=0.418 Sum_probs=203.3
Q ss_pred ccCCCCceEEEEEEEc---CCcEEEEEEccCcc-chhHHHHHHHHHHHhhcCCCCccceeeEEEecCeeEEEEEecCCCC
Q 008707 242 KIGKGSFGSVYYGKMK---DGKEVAVKIMADSC-SHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYEYMHNGT 317 (557)
Q Consensus 242 ~lG~G~~g~Vy~~~~~---~~~~vavK~~~~~~-~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~lv~e~~~~gs 317 (557)
.||+|+||.||+|.+. ++..||||+++... ....+.+.+|+++++.++||||+++++++.. +..++||||+++|+
T Consensus 343 ~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~hpniv~l~~~~~~-~~~~lv~E~~~~g~ 421 (613)
T 2ozo_A 343 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQA-EALMLVMEMAGGGP 421 (613)
T ss_dssp EEEECSSSEEEEEEEECSSCEEEEEEEECCCCCSSTTHHHHHHHHHHHTTCCCTTBCCEEEEEES-SSEEEEEECCTTCB
T ss_pred EEecCCCcEEEEEEEecCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEecc-CCeEEEEEeCCCCc
Confidence 7999999999999875 46679999997643 3356789999999999999999999999976 56899999999999
Q ss_pred hhhhhhccCCCCCcCHHHHHHHHHHHHHHHHHHHcCCCCCeEeeccCCCCEEeCCCCcEEEecccCccccCCCCcc--cc
Q 008707 318 LRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEEDLTH--IS 395 (557)
Q Consensus 318 L~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfgla~~~~~~~~~--~~ 395 (557)
|.+++... ...+++..+..++.||+.||+|||+ ++|+||||||+|||++.++.+||+|||+++........ ..
T Consensus 422 L~~~l~~~--~~~l~~~~~~~i~~qi~~~L~~LH~---~~iiHrDlkp~NILl~~~~~vkL~DFGla~~~~~~~~~~~~~ 496 (613)
T 2ozo_A 422 LHKFLVGK--REEIPVSNVAELLHQVSMGMKYLEE---KNFVHRNLAARNVLLVNRHYAKISDFGLSKALGADDSYYTAR 496 (613)
T ss_dssp HHHHHTTC--TTTSCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEEEETTEEEECCCSTTTTCC---------
T ss_pred HHHHHhhc--cCCCCHHHHHHHHHHHHHHHHHHHH---CCEEcCcCCHHHEEEcCCCcEEEeeccCcccccCCCceeeec
Confidence 99999742 4568999999999999999999998 99999999999999999999999999999876433221 11
Q ss_pred ccccCCCCccCCcccCCCCCCcccceehhHHHHHHHHh-CCCCCCCCCccccccHHHHHHHHHhcCCccccccccccCCC
Q 008707 396 SVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELIS-GKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPVLIGNV 474 (557)
Q Consensus 396 ~~~~g~~~y~aPE~l~~~~~s~~~DvwslG~ll~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~ 474 (557)
....+++.|+|||++.+..++.++|||||||++|||+| |+.||...+..+ +...+..+.... .
T Consensus 497 ~~~~~~~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~~-------~~~~i~~~~~~~---------~ 560 (613)
T 2ozo_A 497 SAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPE-------VMAFIEQGKRME---------C 560 (613)
T ss_dssp -----CCTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCSHH-------HHHHHHTTCCCC---------C
T ss_pred cCCCCccceeCHhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCCHHH-------HHHHHHcCCCCC---------C
Confidence 22235689999999998899999999999999999998 999998543221 122333333211 1
Q ss_pred CHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhhhhhc
Q 008707 475 KIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKIEK 515 (557)
Q Consensus 475 ~~~~~~~l~~li~~cl~~~P~~RPt~~evl~~L~~~~~~~~ 515 (557)
+...+..+.+++.+||+.+|++||++.+|++.|+.+.....
T Consensus 561 p~~~~~~l~~li~~cl~~dP~~RPs~~~l~~~L~~~~~~~~ 601 (613)
T 2ozo_A 561 PPECPPELYALMSDCWIYKWEDRPDFLTVEQRMRACYYSLA 601 (613)
T ss_dssp CTTCCHHHHHHHHHTTCSSTTTSCCHHHHHHHHHHHHHHHS
T ss_pred CCcCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHHHhc
Confidence 12234578899999999999999999999999999876543
No 141
>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}
Probab=100.00 E-value=1.3e-40 Score=328.38 Aligned_cols=246 Identities=27% Similarity=0.419 Sum_probs=180.4
Q ss_pred HHhhcccCCCCceEEEEEEEc-CCcEEEEEEccCccc---hhHHHHHHHHHHHhhcCCCCccceeeEEEecCeeEEEEEe
Q 008707 237 NNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCS---HRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYEY 312 (557)
Q Consensus 237 ~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~lv~e~ 312 (557)
|++.+.||+|+||.||+|... +|+.||+|++..... ...+.+.+|+++++.++||||+++++++.+.+..++||||
T Consensus 13 y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 92 (278)
T 3cok_A 13 FKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNYFEDSNYVYLVLEM 92 (278)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTBCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred ceeeeeecCCCceEEEEEEEccCCceEEEEEeehhhhhhhhHHHHHHHHHHHHHhCCCCCeEeEEEEEccCCeEEEEEec
Confidence 456789999999999999874 689999999864321 2246788999999999999999999999999999999999
Q ss_pred cCCCChhhhhhccCCCCCcCHHHHHHHHHHHHHHHHHHHcCCCCCeEeeccCCCCEEeCCCCcEEEecccCccccCCCCc
Q 008707 313 MHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEEDLT 392 (557)
Q Consensus 313 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfgla~~~~~~~~ 392 (557)
+++++|.+++... ...+++..++.++.|+++||+|||+ .+++||||||+||+++.++.+||+|||++........
T Consensus 93 ~~~~~L~~~l~~~--~~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~ 167 (278)
T 3cok_A 93 CHNGEMNRYLKNR--VKPFSENEARHFMHQIITGMLYLHS---HGILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHE 167 (278)
T ss_dssp CTTEEHHHHHHTC--SSCCCHHHHHHHHHHHHHHHHHHHH---TTEECSSCCGGGEEECTTCCEEECCCTTCEECC----
T ss_pred CCCCcHHHHHhhc--cCCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHEEEcCCCCEEEEeecceeeccCCCC
Confidence 9999999998742 3568999999999999999999998 9999999999999999999999999999987653322
Q ss_pred cccccccCCCCccCCcccCCCCCCcccceehhHHHHHHHHhCCCCCCCCCccccccHHHHHHHHHhcCCccccccccccC
Q 008707 393 HISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPVLIG 472 (557)
Q Consensus 393 ~~~~~~~g~~~y~aPE~l~~~~~s~~~DvwslG~ll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~ 472 (557)
. .....|++.|+|||.+.+..++.++||||||+++|+|++|+.||......... .. +... +..
T Consensus 168 ~-~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~------~~-~~~~------~~~--- 230 (278)
T 3cok_A 168 K-HYTLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNTL------NK-VVLA------DYE--- 230 (278)
T ss_dssp -------------------------CTHHHHHHHHHHHHHHSSCSSCCCSCC------------CCSS------CCC---
T ss_pred c-ceeccCCCCcCCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCChhHHHHH------HH-Hhhc------ccC---
Confidence 1 22345899999999999989999999999999999999999999754432111 00 0000 000
Q ss_pred CCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 008707 473 NVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 505 (557)
Q Consensus 473 ~~~~~~~~~l~~li~~cl~~~P~~RPt~~evl~ 505 (557)
.+......+.+++.+||+.||++|||++|+++
T Consensus 231 -~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~ 262 (278)
T 3cok_A 231 -MPSFLSIEAKDLIHQLLRRNPADRLSLSSVLD 262 (278)
T ss_dssp -CCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred -CccccCHHHHHHHHHHcccCHhhCCCHHHHhc
Confidence 11122346889999999999999999999975
No 142
>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...
Probab=100.00 E-value=1.3e-40 Score=328.49 Aligned_cols=244 Identities=26% Similarity=0.416 Sum_probs=197.6
Q ss_pred HHhhcccCCCCceEEEEEEEc-CCcEEEEEEccCcc---chhHHHHHHHHHHHhhcCCCCccceeeEEEecCeeEEEEEe
Q 008707 237 NNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSC---SHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYEY 312 (557)
Q Consensus 237 ~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~lv~e~ 312 (557)
|++.+.||+|+||.||+|... +++.||+|++.... ....+.+.+|+++++.++||||+++++++.+.+..++||||
T Consensus 11 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 90 (279)
T 3fdn_A 11 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEY 90 (279)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEECC
T ss_pred EEEeeEEecCCCeEEEEEEEccCCcEEEEEEEeccccchhhHHHHHHHHHHHHHcCCCCCCcchhheEecCCEEEEEEec
Confidence 456789999999999999876 47789999986432 12245688999999999999999999999999999999999
Q ss_pred cCCCChhhhhhccCCCCCcCHHHHHHHHHHHHHHHHHHHcCCCCCeEeeccCCCCEEeCCCCcEEEecccCccccCCCCc
Q 008707 313 MHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEEDLT 392 (557)
Q Consensus 313 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfgla~~~~~~~~ 392 (557)
+++++|.+++.. ...+++..+..++.|++.||+|||+ .+++||||||+||+++.++.++|+|||++.......
T Consensus 91 ~~~~~l~~~l~~---~~~~~~~~~~~~~~qi~~~l~~LH~---~~i~H~dlkp~Nili~~~~~~~l~Dfg~~~~~~~~~- 163 (279)
T 3fdn_A 91 APLGTVYRELQK---LSKFDEQRTATYITELANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR- 163 (279)
T ss_dssp CTTEEHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHT---TTCEECCCCGGGEEECTTSCEEECSCCEESCC-----
T ss_pred CCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHh---CCEecccCChHhEEEcCCCCEEEEeccccccCCccc-
Confidence 999999999874 3568999999999999999999998 999999999999999999999999999986554322
Q ss_pred cccccccCCCCccCCcccCCCCCCcccceehhHHHHHHHHhCCCCCCCCCccccccHHHHHHHHHhcCCccccccccccC
Q 008707 393 HISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPVLIG 472 (557)
Q Consensus 393 ~~~~~~~g~~~y~aPE~l~~~~~s~~~DvwslG~ll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~ 472 (557)
.....|++.|+|||.+.+..++.++||||||+++|+|++|+.||...+.... . ..+.....
T Consensus 164 --~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~------~-~~~~~~~~---------- 224 (279)
T 3fdn_A 164 --RTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQET------Y-KRISRVEF---------- 224 (279)
T ss_dssp ------CCCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHH------H-HHHHHTCC----------
T ss_pred --ccccCCCCCccCHhHhccCCCCccchhHhHHHHHHHHHHCCCCCCCCcHHHH------H-HHHHhCCC----------
Confidence 2234589999999999999999999999999999999999999974432211 1 11111111
Q ss_pred CCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 008707 473 NVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLA 506 (557)
Q Consensus 473 ~~~~~~~~~l~~li~~cl~~~P~~RPt~~evl~~ 506 (557)
..+...+..+.+++.+||+.||++|||++||++.
T Consensus 225 ~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~h 258 (279)
T 3fdn_A 225 TFPDFVTEGARDLISRLLKHNPSQRPMLREVLEH 258 (279)
T ss_dssp CCCTTSCHHHHHHHHHHCCSSGGGSCCHHHHHHC
T ss_pred CCCCcCCHHHHHHHHHHhccChhhCCCHHHHhhC
Confidence 0111123467899999999999999999999974
No 143
>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*
Probab=100.00 E-value=1.3e-40 Score=334.01 Aligned_cols=260 Identities=25% Similarity=0.376 Sum_probs=196.1
Q ss_pred HHHhhcccCCCCceEEEEEEE-cCCcEEEEEEccCccc---hhHHHHHHHHHHHhhcCCCCccceeeEEEecCe----eE
Q 008707 236 TNNFCKKIGKGSFGSVYYGKM-KDGKEVAVKIMADSCS---HRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQ----RI 307 (557)
Q Consensus 236 ~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~---~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~----~~ 307 (557)
.|++.+.||+|+||.||+|.+ .+++.||+|++..... .....+.+|+++++.++||||+++++++..... .+
T Consensus 13 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~~~ 92 (311)
T 3ork_A 13 RYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPY 92 (311)
T ss_dssp TEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECTTTTTSHHHHHHHHHHHTTCCCCCCTTBCCEEEEEEEEETTEEEEE
T ss_pred cEEEEEEEccCCCEEEEEEEECCCCceEEEEEeCccccCCHHHHHHHHHHHHHHHcCCCCCcceEEEeeeccCCCCcccE
Confidence 455679999999999999987 4689999999875422 334578899999999999999999999876543 49
Q ss_pred EEEEecCCCChhhhhhccCCCCCcCHHHHHHHHHHHHHHHHHHHcCCCCCeEeeccCCCCEEeCCCCcEEEecccCcccc
Q 008707 308 LVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQA 387 (557)
Q Consensus 308 lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfgla~~~ 387 (557)
+||||+++++|.+++.. ...+++..++.++.|++.||+|||+ .+++||||||+||+++.++.+||+|||++...
T Consensus 93 lv~e~~~g~~L~~~l~~---~~~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~dlkp~Nil~~~~~~~kl~Dfg~a~~~ 166 (311)
T 3ork_A 93 IVMEYVDGVTLRDIVHT---EGPMTPKRAIEVIADACQALNFSHQ---NGIIHRDVKPANIMISATNAVKVMDFGIARAI 166 (311)
T ss_dssp EEEECCCEEEHHHHHHH---HCSCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEEETTSCEEECCCSCC---
T ss_pred EEEecCCCCCHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHH---CCCCcCCCCHHHEEEcCCCCEEEeeccCcccc
Confidence 99999999999999974 3568999999999999999999998 99999999999999999999999999999876
Q ss_pred CCCCc--cccccccCCCCccCCcccCCCCCCcccceehhHHHHHHHHhCCCCCCCCCccccccHHHHHHHHHhcCCcccc
Q 008707 388 EEDLT--HISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISI 465 (557)
Q Consensus 388 ~~~~~--~~~~~~~g~~~y~aPE~l~~~~~s~~~DvwslG~ll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 465 (557)
..... .......||+.|+|||.+.+..++.++||||||+++|+|++|+.||...... ...............
T Consensus 167 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~------~~~~~~~~~~~~~~~ 240 (311)
T 3ork_A 167 ADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPV------SVAYQHVREDPIPPS 240 (311)
T ss_dssp ---------------CCTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHH------HHHHHHHHCCCCCHH
T ss_pred cccccccccccccCcCcccCCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChH------HHHHHHhcCCCCCcc
Confidence 44322 1222345899999999999999999999999999999999999999744321 111222222111100
Q ss_pred ccccccCCCCHHHHHHHHHHHHHccccCCCCCCCHHH-HHHHHHhhhhhh
Q 008707 466 VDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQE-IVLAIQDSIKIE 514 (557)
Q Consensus 466 ~d~~l~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~e-vl~~L~~~~~~~ 514 (557)
.... ..+..+.+++.+||+.||++||++.+ +...+.+....+
T Consensus 241 ---~~~~----~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~~~~~~ 283 (311)
T 3ork_A 241 ---ARHE----GLSADLDAVVLKALAKNPENRYQTAAEMRADLVRVHNGE 283 (311)
T ss_dssp ---HHST----TCCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHHHTTC
T ss_pred ---cccC----CCCHHHHHHHHHHHhcCHhhChhhHHHHHHHHHHHhcCC
Confidence 0001 12346889999999999999996555 555566655443
No 144
>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...
Probab=100.00 E-value=6.2e-40 Score=322.87 Aligned_cols=251 Identities=24% Similarity=0.367 Sum_probs=202.3
Q ss_pred HHHHhhcccCCCCceEEEEEEEc-CCcEEEEEEccCcc-chhHHHHHHHHHHHhhcCCCCccceeeEEEecCeeEEEEEe
Q 008707 235 ATNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSC-SHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYEY 312 (557)
Q Consensus 235 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~lv~e~ 312 (557)
..|++.+.||+|+||.||+|... +++.||+|++.... ....+.+.+|+.+++.++||||+++++++.+.+..++||||
T Consensus 7 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 86 (276)
T 2yex_A 7 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEY 86 (276)
T ss_dssp HHEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGCTTHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred cceEEEEEeecCCCcEEEEEEECCCCcEEEEEEeeeccchhhhHHHHHHHHHHHhcCCCCceeeeeEEEcCCEEEEEEEe
Confidence 45667899999999999999876 68999999986432 33457789999999999999999999999999999999999
Q ss_pred cCCCChhhhhhccCCCCCcCHHHHHHHHHHHHHHHHHHHcCCCCCeEeeccCCCCEEeCCCCcEEEecccCccccCCCCc
Q 008707 313 MHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEEDLT 392 (557)
Q Consensus 313 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfgla~~~~~~~~ 392 (557)
+++++|.+++. ....+++..+..++.|++.||+|||+ .+++||||||+||+++.++.+||+|||++........
T Consensus 87 ~~~~~L~~~l~---~~~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~ 160 (276)
T 2yex_A 87 CSGGELFDRIE---PDIGMPEPDAQRFFHQLMAGVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNR 160 (276)
T ss_dssp CTTEEGGGGSB---TTTBCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTCCEEECCCTTCEECEETTE
T ss_pred cCCCcHHHHHh---hccCCCHHHHHHHHHHHHHHHHHHHh---CCeeccCCChHHEEEccCCCEEEeeCCCccccCCCcc
Confidence 99999999987 34678999999999999999999998 9999999999999999999999999999986543221
Q ss_pred -cccccccCCCCccCCcccCCCCC-CcccceehhHHHHHHHHhCCCCCCCCCccccccHHHHHHHHHhcCCccccccccc
Q 008707 393 -HISSVARGTVGYLDPEYYGNQQL-TEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPVL 470 (557)
Q Consensus 393 -~~~~~~~g~~~y~aPE~l~~~~~-s~~~DvwslG~ll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l 470 (557)
.......|++.|+|||.+.+..+ +.++||||||+++|+|++|+.||....... .....+ ....... .
T Consensus 161 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~-~~~~~~----~~~~~~~---~--- 229 (276)
T 2yex_A 161 ERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSC-QEYSDW----KEKKTYL---N--- 229 (276)
T ss_dssp ECCBCCCCSCGGGCCGGGGTCSSBCHHHHHHHHHHHHHHHHHHSSCCCSCSCTTS-HHHHHH----HTTCTTS---T---
T ss_pred hhcccCCccccCccChHHHhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCchHH-HHHHHh----hhccccc---C---
Confidence 12233458999999999987765 779999999999999999999997543321 111111 1111100 0
Q ss_pred cCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 008707 471 IGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 505 (557)
Q Consensus 471 ~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~evl~ 505 (557)
.....+..+.+++.+||+.||++|||++|+++
T Consensus 230 ---~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~ 261 (276)
T 2yex_A 230 ---PWKKIDSAPLALLHKILVENPSARITIPDIKK 261 (276)
T ss_dssp ---TGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred ---chhhcCHHHHHHHHHHCCCCchhCCCHHHHhc
Confidence 00112336789999999999999999999975
No 145
>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}
Probab=100.00 E-value=2.7e-40 Score=337.68 Aligned_cols=264 Identities=16% Similarity=0.198 Sum_probs=205.3
Q ss_pred HHHhhcccCCCCceEEEEEEEcC---------CcEEEEEEccCccchhHHHHHHHHHHHhhcCCCCccc-----------
Q 008707 236 TNNFCKKIGKGSFGSVYYGKMKD---------GKEVAVKIMADSCSHRTQQFVTEVALLSRIHHRNLVP----------- 295 (557)
Q Consensus 236 ~~~~~~~lG~G~~g~Vy~~~~~~---------~~~vavK~~~~~~~~~~~~~~~E~~il~~l~h~nIv~----------- 295 (557)
.|++.+.||+|+||.||+|.... ++.||+|++... +.+.+|++++++++||||++
T Consensus 43 ~y~~~~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~-----~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~ 117 (352)
T 2jii_A 43 QWKLKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKD-----GRLFNEQNFFQRAAKPLQVNKWKKLYSTPLL 117 (352)
T ss_dssp EEEEEEEEEEETTEEEEEEEECC-----------CEEEEEEETT-----STHHHHHHHHHHHCCHHHHHHHHHHTTCTTC
T ss_pred eEEEEEEecCCCCeEEEEEeecCCccccccccCceEEEEEeccc-----chHHHHHHHHHHhcccchhhhhhhhccCCcc
Confidence 34567899999999999998764 789999998643 45778999999999999988
Q ss_pred ----eeeEEEe-cCeeEEEEEecCCCChhhhhhccCCCCCcCHHHHHHHHHHHHHHHHHHHcCCCCCeEeeccCCCCEEe
Q 008707 296 ----LIGYCEE-EHQRILVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILL 370 (557)
Q Consensus 296 ----~~~~~~~-~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~dlk~~NIll 370 (557)
+++++.. ++..++||||+ +++|.+++... ....+++..++.++.||+.||+|||+ .+|+||||||+||++
T Consensus 118 ~i~~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~-~~~~l~~~~~~~i~~qi~~~L~~LH~---~~ivH~Dikp~NIl~ 192 (352)
T 2jii_A 118 AIPTCMGFGVHQDKYRFLVLPSL-GRSLQSALDVS-PKHVLSERSVLQVACRLLDALEFLHE---NEYVHGNVTAENIFV 192 (352)
T ss_dssp SCCCCCEEEEETTTEEEEEEECC-CEEHHHHHHHS-GGGCCCHHHHHHHHHHHHHHHHHHHH---TTCBCSCCCGGGEEE
T ss_pred CccchhhccccCCcEEEEEecCC-CcCHHHHHHhC-CcCCCCHHHHHHHHHHHHHHHHHHHh---CCccCCCCCHHHEEE
Confidence 5667765 67889999999 99999999853 23679999999999999999999999 999999999999999
Q ss_pred CCCC--cEEEecccCccccCCCCcc------ccccccCCCCccCCcccCCCCCCcccceehhHHHHHHHHhCCCCCCCCC
Q 008707 371 DINM--RAKVSDFGLSRQAEEDLTH------ISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVED 442 (557)
Q Consensus 371 ~~~~--~~kl~Dfgla~~~~~~~~~------~~~~~~g~~~y~aPE~l~~~~~s~~~DvwslG~ll~elltg~~pf~~~~ 442 (557)
+.++ .+||+|||++......... ......||+.|+|||.+.+..++.++||||||+++|||++|+.||....
T Consensus 193 ~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~ 272 (352)
T 2jii_A 193 DPEDQSQVTLAGYGFAFRYCPSGKHVAYVEGSRSPHEGDLEFISMDLHKGCGPSRRSDLQSLGYCMLKWLYGFLPWTNCL 272 (352)
T ss_dssp ETTEEEEEEECCGGGCBCSSGGGCCCCCCTTSSCTTCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGGT
T ss_pred cCCCCceEEEecCcceeeccCCCccccccccccccccCCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCcccCC
Confidence 9988 8999999999876543221 1123468999999999999999999999999999999999999998543
Q ss_pred ccccccHHHHHHHHHhcCCccccccccccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhhhhhc
Q 008707 443 FGAELNIVHWARSMIKKGDVISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKIEK 515 (557)
Q Consensus 443 ~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~evl~~L~~~~~~~~ 515 (557)
... ..+........ . ......+..... ...+..+.+++.+||+.||++|||++||++.|+++.....
T Consensus 273 ~~~-~~~~~~~~~~~-~-~~~~~~~~~~~~---~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~~~~ 339 (352)
T 2jii_A 273 PNT-EDIMKQKQKFV-D-KPGPFVGPCGHW---IRPSETLQKYLKVVMALTYEEKPPYAMLRNNLEALLQDLR 339 (352)
T ss_dssp TCH-HHHHHHHHHHH-H-SCCCEECTTSCE---ECCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHHTT
T ss_pred cCH-HHHHHHHHhcc-C-Chhhhhhhcccc---CCCcHHHHHHHHHHHhCChhhCCCHHHHHHHHHHHHHhcC
Confidence 221 11222221111 1 111111111000 0112478899999999999999999999999999987654
No 146
>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*
Probab=100.00 E-value=1.3e-40 Score=330.69 Aligned_cols=257 Identities=26% Similarity=0.426 Sum_probs=205.2
Q ss_pred HHhhc-ccCCCCceEEEEEEEc---CCcEEEEEEccCcc--chhHHHHHHHHHHHhhcCCCCccceeeEEEecCeeEEEE
Q 008707 237 NNFCK-KIGKGSFGSVYYGKMK---DGKEVAVKIMADSC--SHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVY 310 (557)
Q Consensus 237 ~~~~~-~lG~G~~g~Vy~~~~~---~~~~vavK~~~~~~--~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~lv~ 310 (557)
|.+.+ .||+|+||.||+|.+. +++.||+|++.... ....+.+.+|+++++.++||||+++++++ ..+..++||
T Consensus 18 y~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-~~~~~~lv~ 96 (291)
T 1xbb_A 18 LTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVM 96 (291)
T ss_dssp EEEEEEEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEE-ESSSEEEEE
T ss_pred hhhccCccccccCeeeEeeeecCCCceeeEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEE-CCCCcEEEE
Confidence 34445 8999999999999653 46889999987543 23356799999999999999999999999 566789999
Q ss_pred EecCCCChhhhhhccCCCCCcCHHHHHHHHHHHHHHHHHHHcCCCCCeEeeccCCCCEEeCCCCcEEEecccCccccCCC
Q 008707 311 EYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEED 390 (557)
Q Consensus 311 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfgla~~~~~~ 390 (557)
||+++++|.+++.. ...+++..++.++.|++.||+|||+ .+++||||||+||+++.++.+||+|||++......
T Consensus 97 e~~~~~~L~~~l~~---~~~~~~~~~~~i~~qi~~~l~~LH~---~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~ 170 (291)
T 1xbb_A 97 EMAELGPLNKYLQQ---NRHVKDKNIIELVHQVSMGMKYLEE---SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRAD 170 (291)
T ss_dssp ECCTTEEHHHHHHH---CTTCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEEEETTEEEECCCTTCEECCTT
T ss_pred EeCCCCCHHHHHHh---CcCCCHHHHHHHHHHHHHHHHHHHh---CCeEcCCCCcceEEEeCCCcEEEccCCcceeeccC
Confidence 99999999999974 4568999999999999999999998 99999999999999999999999999999876543
Q ss_pred Cccc--cccccCCCCccCCcccCCCCCCcccceehhHHHHHHHHh-CCCCCCCCCccccccHHHHHHHHHhcCCcccccc
Q 008707 391 LTHI--SSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELIS-GKKPVSVEDFGAELNIVHWARSMIKKGDVISIVD 467 (557)
Q Consensus 391 ~~~~--~~~~~g~~~y~aPE~l~~~~~s~~~DvwslG~ll~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 467 (557)
.... .....+++.|+|||.+.+..++.++||||||+++|+|++ |+.||...+... +...+..+....
T Consensus 171 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~-------~~~~~~~~~~~~--- 240 (291)
T 1xbb_A 171 ENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSE-------VTAMLEKGERMG--- 240 (291)
T ss_dssp CSEEEC----CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCCHHH-------HHHHHHTTCCCC---
T ss_pred CCcccccccCCCCceeeChHHhccCCCChhhhHHHHHHHHHHHHhcCCCCCCCCCHHH-------HHHHHHcCCCCC---
Confidence 3221 122336788999999988889999999999999999999 999997443211 122222322211
Q ss_pred ccccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhhhhhcC
Q 008707 468 PVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKIEKG 516 (557)
Q Consensus 468 ~~l~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~evl~~L~~~~~~~~~ 516 (557)
.+...+..+.+++.+||+.||++||++.||++.|+++......
T Consensus 241 ------~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~~~~~ 283 (291)
T 1xbb_A 241 ------CPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYYYDVVN 283 (291)
T ss_dssp ------CCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHHHHH
T ss_pred ------CCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHHHhh
Confidence 1112234788999999999999999999999999998876543
No 147
>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}
Probab=100.00 E-value=6.5e-40 Score=324.68 Aligned_cols=251 Identities=24% Similarity=0.362 Sum_probs=196.8
Q ss_pred HHHHhhcccCCCCceEEEEEEEc-CCcEEEEEEccCcc-chhHHHHHHHHHHHhhcCCCCccceeeEEEecCeeEEEEEe
Q 008707 235 ATNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSC-SHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYEY 312 (557)
Q Consensus 235 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~lv~e~ 312 (557)
..|.+.+.||+|+||.||++... ++..||+|++.... ....+.+.+|+++++.++||||+++++++.+.+..++||||
T Consensus 22 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~ 101 (285)
T 3is5_A 22 DLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEVFEDYHNMYIVMET 101 (285)
T ss_dssp HHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEECC
T ss_pred hheeecceeccCCCeEEEEEEEccCCceEEEEEeeccccchhHHHHHHHHHHHHhCCCchHHhHHHheecCCeEEEEEEe
Confidence 56777899999999999999875 58899999986543 33457889999999999999999999999999999999999
Q ss_pred cCCCChhhhhhccC-CCCCcCHHHHHHHHHHHHHHHHHHHcCCCCCeEeeccCCCCEEe---CCCCcEEEecccCccccC
Q 008707 313 MHNGTLRDRLHGSV-NQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILL---DINMRAKVSDFGLSRQAE 388 (557)
Q Consensus 313 ~~~gsL~~~l~~~~-~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~dlk~~NIll---~~~~~~kl~Dfgla~~~~ 388 (557)
+++|+|.+.+.... ....+++..+..++.|++.||+|||+ .+++||||||+||++ +.++.+||+|||++....
T Consensus 102 ~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~---~~ivH~dikp~NIl~~~~~~~~~~kl~Dfg~a~~~~ 178 (285)
T 3is5_A 102 CEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHS---QHVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFK 178 (285)
T ss_dssp CSCCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCSGGGEEESSSSTTCCEEECCCCCCCC--
T ss_pred CCCCcHHHHHHhhhhcccCCCHHHHHHHHHHHHHHHHHHHh---CCEEECCCCHHHEEEecCCCCCCEEEEeeecceecC
Confidence 99999999886432 34678999999999999999999998 999999999999999 456789999999998754
Q ss_pred CCCccccccccCCCCccCCcccCCCCCCcccceehhHHHHHHHHhCCCCCCCCCccccccHHHHHHHHHhcCCccccccc
Q 008707 389 EDLTHISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDP 468 (557)
Q Consensus 389 ~~~~~~~~~~~g~~~y~aPE~l~~~~~s~~~DvwslG~ll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 468 (557)
.... .....|++.|+|||.+. ..++.++||||||+++|+|++|+.||....... .. .............
T Consensus 179 ~~~~--~~~~~~t~~y~aPE~~~-~~~~~~~Di~slG~il~~ll~g~~pf~~~~~~~------~~-~~~~~~~~~~~~~- 247 (285)
T 3is5_A 179 SDEH--STNAAGTALYMAPEVFK-RDVTFKCDIWSAGVVMYFLLTGCLPFTGTSLEE------VQ-QKATYKEPNYAVE- 247 (285)
T ss_dssp ----------CTTGGGCCHHHHT-TCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHH------HH-HHHHHCCCCCCC--
T ss_pred Cccc--CcCcccccCcCChHHhc-cCCCcccCeehHHHHHHHHHhCCCCCCCCCHHH------HH-hhhccCCcccccc-
Confidence 4322 23345899999999986 468899999999999999999999997543221 11 1111111100000
Q ss_pred cccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 008707 469 VLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 505 (557)
Q Consensus 469 ~l~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~evl~ 505 (557)
... ....+.+++.+||+.||++|||++||++
T Consensus 248 --~~~----~~~~~~~li~~~L~~dP~~Rps~~e~l~ 278 (285)
T 3is5_A 248 --CRP----LTPQAVDLLKQMLTKDPERRPSAAQVLH 278 (285)
T ss_dssp ---CC----CCHHHHHHHHHHTCSCTTTSCCHHHHHT
T ss_pred --cCc----CCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 001 1236789999999999999999999985
No 148
>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A
Probab=100.00 E-value=1.8e-40 Score=337.11 Aligned_cols=252 Identities=23% Similarity=0.307 Sum_probs=200.1
Q ss_pred HHHHHhhcccCCCCceEEEEEEEc-CCcEEEEEEccCccchhHHHHHHHHHHHhhc-CCCCccceeeEEEecCeeEEEEE
Q 008707 234 EATNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCSHRTQQFVTEVALLSRI-HHRNLVPLIGYCEEEHQRILVYE 311 (557)
Q Consensus 234 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~il~~l-~h~nIv~~~~~~~~~~~~~lv~e 311 (557)
...|++.+.||+|+||.||+|..+ +++.||+|++..... ...+|++++.++ +||||+++++++.+.+..++|||
T Consensus 21 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~----~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E 96 (342)
T 2qr7_A 21 TDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKR----DPTEEIEILLRYGQHPNIITLKDVYDDGKYVYVVTE 96 (342)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTTC----CCHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEEC
T ss_pred cccEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEcccC----ChHHHHHHHHHhcCCCCcCeEEEEEEcCCEEEEEEe
Confidence 345677899999999999999876 588999999865432 234688888888 79999999999999999999999
Q ss_pred ecCCCChhhhhhccCCCCCcCHHHHHHHHHHHHHHHHHHHcCCCCCeEeeccCCCCEEeCCC----CcEEEecccCcccc
Q 008707 312 YMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDIN----MRAKVSDFGLSRQA 387 (557)
Q Consensus 312 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~dlk~~NIll~~~----~~~kl~Dfgla~~~ 387 (557)
|+++|+|.+++.. ...+++..+..++.||+.||+|||+ .||+||||||+|||+.++ +.+||+|||++...
T Consensus 97 ~~~gg~L~~~i~~---~~~~~~~~~~~~~~qi~~al~~lH~---~givHrDlkp~NIl~~~~~~~~~~~kl~Dfg~a~~~ 170 (342)
T 2qr7_A 97 LMKGGELLDKILR---QKFFSEREASAVLFTITKTVEYLHA---QGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQL 170 (342)
T ss_dssp CCCSCBHHHHHHT---CTTCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGGGEEESSSSCSGGGEEECCCTTCEEC
T ss_pred CCCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHH---CCcEeccCCHHHEEEecCCCCcCeEEEEECCCcccC
Confidence 9999999999873 4568999999999999999999998 999999999999998543 34999999999876
Q ss_pred CCCCccccccccCCCCccCCcccCCCCCCcccceehhHHHHHHHHhCCCCCCCCCccccccHHHHHHHHHhcCCcccccc
Q 008707 388 EEDLTHISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVD 467 (557)
Q Consensus 388 ~~~~~~~~~~~~g~~~y~aPE~l~~~~~s~~~DvwslG~ll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 467 (557)
..... ......||+.|+|||++.+..++.++|||||||++|+|++|..||.......... +...+..+....
T Consensus 171 ~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~----~~~~i~~~~~~~--- 242 (342)
T 2qr7_A 171 RAENG-LLMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFANGPDDTPEE----ILARIGSGKFSL--- 242 (342)
T ss_dssp BCTTC-CBCCSSCCSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCSSCSSTTSCHHH----HHHHHHHCCCCC---
T ss_pred cCCCC-ceeccCCCccccCHHHhcCCCCCCccCeeeHhHHHHHHhcCCCCCCCCCcCCHHH----HHHHHccCCccc---
Confidence 44322 2233468999999999988888999999999999999999999997533222111 222233333211
Q ss_pred ccccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 008707 468 PVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLA 506 (557)
Q Consensus 468 ~~l~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~evl~~ 506 (557)
...........+.+++.+||..||++|||+.|+++.
T Consensus 243 ---~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~~il~h 278 (342)
T 2qr7_A 243 ---SGGYWNSVSDTAKDLVSKMLHVDPHQRLTAALVLRH 278 (342)
T ss_dssp ---CSTTTTTSCHHHHHHHHHHTCSSTTTSCCHHHHTTS
T ss_pred ---CccccccCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 111111223468899999999999999999999863
No 149
>3gxj_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3hmm_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00 E-value=2.8e-42 Score=344.35 Aligned_cols=262 Identities=27% Similarity=0.426 Sum_probs=188.0
Q ss_pred HHHhhcccCCCCceEEEEEEEcCCcEEEEEEccCccchhHHHHHHHHHHHhh--cCCCCccceeeEEEecC----eeEEE
Q 008707 236 TNNFCKKIGKGSFGSVYYGKMKDGKEVAVKIMADSCSHRTQQFVTEVALLSR--IHHRNLVPLIGYCEEEH----QRILV 309 (557)
Q Consensus 236 ~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~il~~--l~h~nIv~~~~~~~~~~----~~~lv 309 (557)
.|.+.+.||+|+||.||+|.+. ++.||||++... ....+.+|.+++.. ++||||+++++++.... ..++|
T Consensus 4 ~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~---~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv 79 (303)
T 3gxj_A 4 TIVLQESIGKGRFGEVWRGKWR-GEEVAVKIFSSR---EERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLV 79 (303)
T ss_dssp GCCCCEEEEECSSSEEEEC-CT-TSCEEEEECC-T---THHHHHHHHHHHTSTTCCC-CBCCEEEEEEEECSSSEEEEEE
T ss_pred eeeehhhccCCCCeEEEEEEEc-CcceEEEEeccc---chhhHHHHHHHHHHHhccCcceeeeeeecccCCCccceeEEE
Confidence 3456789999999999999876 899999998643 34567778888887 68999999999998776 78999
Q ss_pred EEecCCCChhhhhhccCCCCCcCHHHHHHHHHHHHHHHHHHH--------cCCCCCeEeeccCCCCEEeCCCCcEEEecc
Q 008707 310 YEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLH--------TGCNPGIIHRDVKSSNILLDINMRAKVSDF 381 (557)
Q Consensus 310 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH--------~~~~~~ivH~dlk~~NIll~~~~~~kl~Df 381 (557)
|||+++|+|.+++.. ..+++..++.++.|++.||+||| + .+++||||||+|||++.++.+||+||
T Consensus 80 ~e~~~~g~L~~~l~~----~~~~~~~~~~~~~~i~~~l~~lH~~~~~~~~~---~~ivH~Dlkp~Nil~~~~~~~kl~DF 152 (303)
T 3gxj_A 80 SDYHEHGSLFDYLNR----YTVTVEGMIKLALSTASGLAHLHMEIVGTQGK---PAIAHRDLKSKNILVKKNGTCCIADL 152 (303)
T ss_dssp EECCTTCCHHHHHHH----CCBCC-CHHHHC-CHHHHHC-CCCCBCSTTCB---C-CCCSCCCGGGC-CCTTCCC-BCCC
T ss_pred EeccCCCCHHHHHhc----cCcchHHHHHHHHHHHHHHHHHHHHHhhhccC---CCEeeCcCCHHHeEECCCCCEEEeec
Confidence 999999999999963 35788889999999999999999 7 89999999999999999999999999
Q ss_pred cCccccCCCCccc---cccccCCCCccCCcccCCC------CCCcccceehhHHHHHHHHhC----------CCCCCCCC
Q 008707 382 GLSRQAEEDLTHI---SSVARGTVGYLDPEYYGNQ------QLTEKSDVYSFGVVLLELISG----------KKPVSVED 442 (557)
Q Consensus 382 gla~~~~~~~~~~---~~~~~g~~~y~aPE~l~~~------~~s~~~DvwslG~ll~elltg----------~~pf~~~~ 442 (557)
|++.......... .....||+.|+|||.+.+. .++.++||||||+++|||+|| ..||....
T Consensus 153 g~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~p~~~~~ 232 (303)
T 3gxj_A 153 GLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLV 232 (303)
T ss_dssp CC-CCEETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHC-CCCC-CTGGGBCBTTBC-CCCCTTTTTC
T ss_pred CcceeccCCCcccccccCCCCcCccccCHhhhcCcccccccccCcchhHHHHHHHHHHHHhcCCCccccceeeccccccC
Confidence 9997654433221 2233589999999999776 445689999999999999999 66665322
Q ss_pred ccccccHHHHHHHHHhcCCccccccccccCC-CCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhhhhh
Q 008707 443 FGAELNIVHWARSMIKKGDVISIVDPVLIGN-VKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKIE 514 (557)
Q Consensus 443 ~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~-~~~~~~~~l~~li~~cl~~~P~~RPt~~evl~~L~~~~~~~ 514 (557)
.... ...+ ....+...... +..... .....+..+.+++.+||+.||++|||++||++.|+++.+.+
T Consensus 233 ~~~~-~~~~-~~~~~~~~~~~----~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~l~~~~ 299 (303)
T 3gxj_A 233 PSDP-SVEE-MRKVVCEQKLR----PNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQE 299 (303)
T ss_dssp C-CC-CCC--CHHHHTTSCCC----CCCCGGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHC-CCC-
T ss_pred CCCc-cHHH-HHHHHHHhhcC----CCccccccchhhHHHHHHHHHHHhccCcccCCCHHHHHHHHHHhhhhc
Confidence 1110 0000 01111111111 111111 12256678999999999999999999999999999887654
No 150
>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*
Probab=100.00 E-value=6.1e-41 Score=330.72 Aligned_cols=253 Identities=30% Similarity=0.488 Sum_probs=199.4
Q ss_pred HHHHhhcccCCCCceEEEEEEEcCCcEEEEEEccCccchhHHHHHHHHHHHhhcCCCCccceeeEEEec-CeeEEEEEec
Q 008707 235 ATNNFCKKIGKGSFGSVYYGKMKDGKEVAVKIMADSCSHRTQQFVTEVALLSRIHHRNLVPLIGYCEEE-HQRILVYEYM 313 (557)
Q Consensus 235 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~-~~~~lv~e~~ 313 (557)
..|++.+.||+|+||.||+|.+. |+.||+|++.... ..+.+.+|+++++.++||||+++++++.+. +..++||||+
T Consensus 21 ~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~~ 97 (278)
T 1byg_A 21 KELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYM 97 (278)
T ss_dssp GGEEEEEEEEECSSCEEEEEEET-TEEEEEEECCCCC----HHHHHTHHHHTTCCCTTBCCEEEEECCC--CCEEEECCC
T ss_pred hhceEEeEEecCCCceEEEEEEc-CCEEEEEEecchh--HHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCCceEEEEecC
Confidence 34567899999999999999886 8899999987542 456789999999999999999999987554 4789999999
Q ss_pred CCCChhhhhhccCCCCCcCHHHHHHHHHHHHHHHHHHHcCCCCCeEeeccCCCCEEeCCCCcEEEecccCccccCCCCcc
Q 008707 314 HNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEEDLTH 393 (557)
Q Consensus 314 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfgla~~~~~~~~~ 393 (557)
++++|.+++... ....+++..++.++.|++.||+|||+ .+++||||||+||+++.++.+||+|||++.......
T Consensus 98 ~~~~L~~~l~~~-~~~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~-- 171 (278)
T 1byg_A 98 AKGSLVDYLRSR-GRSVLGGDCLLKFSLDVCEAMEYLEG---NNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQ-- 171 (278)
T ss_dssp TTEEHHHHHHHH-HHHHCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEECTTSCEEECCCCC----------
T ss_pred CCCCHHHHHHhc-ccccCCHHHHHHHHHHHHHHHHHHHh---CCccccCCCcceEEEeCCCcEEEeeccccccccccc--
Confidence 999999999743 12237888999999999999999998 999999999999999999999999999987654332
Q ss_pred ccccccCCCCccCCcccCCCCCCcccceehhHHHHHHHHh-CCCCCCCCCccccccHHHHHHHHHhcCCccccccccccC
Q 008707 394 ISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELIS-GKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPVLIG 472 (557)
Q Consensus 394 ~~~~~~g~~~y~aPE~l~~~~~s~~~DvwslG~ll~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~ 472 (557)
....+++.|+|||.+.+..++.++||||||+++|+|+| |+.||....... .. ..+..+...
T Consensus 172 --~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~---~~----~~~~~~~~~--------- 233 (278)
T 1byg_A 172 --DTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKD---VV----PRVEKGYKM--------- 233 (278)
T ss_dssp ------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCGGG---HH----HHHTTTCCC---------
T ss_pred --cCCCccccccCHHHhCCCCCCchhcHHHHHHHHHHHHhCCCCCCCCCCHHH---HH----HHHhcCCCC---------
Confidence 12347889999999998899999999999999999998 999997543321 11 122222111
Q ss_pred CCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhhhhh
Q 008707 473 NVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKIE 514 (557)
Q Consensus 473 ~~~~~~~~~l~~li~~cl~~~P~~RPt~~evl~~L~~~~~~~ 514 (557)
......+..+.+++.+||+.||++|||+.|+++.|+++...+
T Consensus 234 ~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~i~~~~ 275 (278)
T 1byg_A 234 DAPDGCPPAVYEVMKNCWHLDAAMRPSFLQLREQLEHIKTHE 275 (278)
T ss_dssp CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHC
T ss_pred CCcccCCHHHHHHHHHHhcCChhhCCCHHHHHHHHHHHHhhh
Confidence 111122347889999999999999999999999999987654
No 151
>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*
Probab=100.00 E-value=5.9e-40 Score=339.50 Aligned_cols=248 Identities=23% Similarity=0.336 Sum_probs=194.6
Q ss_pred HHhhcccCCCCceEEEEEEEcCCcEEEEEEccCc--cchhHHHHHHHHHHHhhcC--CCCccceeeEEEecCeeEEEEEe
Q 008707 237 NNFCKKIGKGSFGSVYYGKMKDGKEVAVKIMADS--CSHRTQQFVTEVALLSRIH--HRNLVPLIGYCEEEHQRILVYEY 312 (557)
Q Consensus 237 ~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~il~~l~--h~nIv~~~~~~~~~~~~~lv~e~ 312 (557)
|++.+.||+|+||.||+|...+++.||||++... .....+.+.+|+++++.++ ||||+++++++...+..++|||
T Consensus 58 y~~~~~LG~G~fg~Vy~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~E- 136 (390)
T 2zmd_A 58 YSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVME- 136 (390)
T ss_dssp EEEEEEEECCSSEEEEEEECTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEEE-
T ss_pred eEEEEEEccCCCeEEEEEEcCCCCEEEEEEEecccccHHHHHHHHHHHHHHHHcccCCCeEEEEEEEEecCCEEEEEEe-
Confidence 5567899999999999999888999999998643 2334577899999999996 5999999999999999999999
Q ss_pred cCCCChhhhhhccCCCCCcCHHHHHHHHHHHHHHHHHHHcCCCCCeEeeccCCCCEEeCCCCcEEEecccCccccCCCCc
Q 008707 313 MHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEEDLT 392 (557)
Q Consensus 313 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfgla~~~~~~~~ 392 (557)
+.+++|.+++.. ...+++..+..++.||+.||+|||+ .+|+||||||+|||++ ++.+||+|||++........
T Consensus 137 ~~~~~L~~~l~~---~~~~~~~~~~~i~~qi~~aL~~lH~---~~ivHrDlkp~NIll~-~~~~kl~DFG~a~~~~~~~~ 209 (390)
T 2zmd_A 137 CGNIDLNSWLKK---KKSIDPWERKSYWKNMLEAVHTIHQ---HGIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDTT 209 (390)
T ss_dssp CCSEEHHHHHHH---CSSCCHHHHHHHHHHHHHHHHHHHT---TTCCCCCCCGGGEEES-SSCEEECCCSSSCCC-----
T ss_pred cCCCCHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHH---CCeeecCCCHHHEEEE-CCeEEEEecCccccccCCCc
Confidence 568899999984 3478888999999999999999998 9999999999999996 58899999999987654322
Q ss_pred c-ccccccCCCCccCCcccCC-----------CCCCcccceehhHHHHHHHHhCCCCCCCCCccccccHHHHHHHHHhcC
Q 008707 393 H-ISSVARGTVGYLDPEYYGN-----------QQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKG 460 (557)
Q Consensus 393 ~-~~~~~~g~~~y~aPE~l~~-----------~~~s~~~DvwslG~ll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~ 460 (557)
. ......||+.|+|||++.+ ..++.++|||||||++|||++|+.||..... ........+...
T Consensus 210 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~-----~~~~~~~~~~~~ 284 (390)
T 2zmd_A 210 SVVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIIN-----QISKLHAIIDPN 284 (390)
T ss_dssp ----CCSCCCGGGCCHHHHHCC------------CCHHHHHHHHHHHHHHHHHSSCTTTTCCC-----HHHHHHHHHCTT
T ss_pred cccCCCCCcCCCccChHHhhhccccccccccccCCCChhhHHHHHHHHHHHHHCCCcchhhhH-----HHHHHHHHhCcc
Confidence 1 2234569999999999865 3688999999999999999999999973221 111122222211
Q ss_pred CccccccccccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 008707 461 DVISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLA 506 (557)
Q Consensus 461 ~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~evl~~ 506 (557)
.... .+......+.+++.+||+.||++|||+.|+++.
T Consensus 285 ~~~~---------~~~~~~~~~~~li~~~L~~dP~~Rps~~ell~h 321 (390)
T 2zmd_A 285 HEIE---------FPDIPEKDLQDVLKCCLKRDPKQRISIPELLAH 321 (390)
T ss_dssp SCCC---------CCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred ccCC---------CCccchHHHHHHHHHHcccChhhCCCHHHHhhC
Confidence 1111 111113468899999999999999999999864
No 152
>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A
Probab=100.00 E-value=4.6e-40 Score=328.83 Aligned_cols=250 Identities=26% Similarity=0.400 Sum_probs=201.4
Q ss_pred HHHHHhhcccCCCCceEEEEEEEc-CCcEEEEEEccCccchhHHHHHHHHHHHhhcCCCCccceeeEEEecCeeEEEEEe
Q 008707 234 EATNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCSHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYEY 312 (557)
Q Consensus 234 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~lv~e~ 312 (557)
...|.+.+.||+|+||.||++... +|+.||+|++........+.+.+|+++++.++||||+++++++.+.+..++||||
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 87 (304)
T 2jam_A 8 RKTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLEDIYESTTHYYLVMQL 87 (304)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECC------HHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECC
T ss_pred hccceeeeeccCCCCceEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHhCCCCCeeehhhhcccCCEEEEEEEc
Confidence 356677899999999999999876 6899999999765444556788999999999999999999999999999999999
Q ss_pred cCCCChhhhhhccCCCCCcCHHHHHHHHHHHHHHHHHHHcCCCCCeEeeccCCCCEEe---CCCCcEEEecccCccccCC
Q 008707 313 MHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILL---DINMRAKVSDFGLSRQAEE 389 (557)
Q Consensus 313 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~dlk~~NIll---~~~~~~kl~Dfgla~~~~~ 389 (557)
+++++|.+++.. ...+++..+..++.|++.||+|||+ .+++||||||+||++ +.++.++|+|||++.....
T Consensus 88 ~~~~~L~~~l~~---~~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dikp~NIl~~~~~~~~~~kl~Dfg~~~~~~~ 161 (304)
T 2jam_A 88 VSGGELFDRILE---RGVYTEKDASLVIQQVLSAVKYLHE---NGIVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQN 161 (304)
T ss_dssp CCSCBHHHHHHH---HSCCCHHHHHHHHHHHHHHHHHHHH---TTCCCCSCCGGGCEESSSSTTCCEEBCSCSTTCCCCC
T ss_pred CCCccHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHH---CCccccCCCHHHEEEecCCCCCCEEEccCCcceecCC
Confidence 999999998874 3468999999999999999999998 999999999999999 7789999999999876543
Q ss_pred CCccccccccCCCCccCCcccCCCCCCcccceehhHHHHHHHHhCCCCCCCCCccccccHHHHHHHHHhcCCcccccccc
Q 008707 390 DLTHISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPV 469 (557)
Q Consensus 390 ~~~~~~~~~~g~~~y~aPE~l~~~~~s~~~DvwslG~ll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 469 (557)
.. .....|++.|+|||.+.+..++.++||||||+++|+|++|+.||....... + ...+..+... ....
T Consensus 162 ~~---~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~---~----~~~i~~~~~~--~~~~ 229 (304)
T 2jam_A 162 GI---MSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPFYEETESK---L----FEKIKEGYYE--FESP 229 (304)
T ss_dssp BT---THHHHSCCCBCCTTTBSSCSCCHHHHHHHHHHHHHHHHHSSCTTTTSCHHH---H----HHHHHHCCCC--CCTT
T ss_pred Cc---cccccCCCCccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHH---H----HHHHHcCCCC--CCcc
Confidence 21 122348999999999999999999999999999999999999997433211 1 1122222211 0011
Q ss_pred ccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 008707 470 LIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 505 (557)
Q Consensus 470 l~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~evl~ 505 (557)
. ....+..+.+++.+||+.||++|||++|+++
T Consensus 230 ~----~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~ 261 (304)
T 2jam_A 230 F----WDDISESAKDFICHLLEKDPNERYTCEKALS 261 (304)
T ss_dssp T----TTTSCHHHHHHHHHHHCSSTTTSCCHHHHHT
T ss_pred c----cccCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 1 1122347889999999999999999999986
No 153
>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*
Probab=100.00 E-value=6.1e-41 Score=338.84 Aligned_cols=261 Identities=30% Similarity=0.495 Sum_probs=206.2
Q ss_pred HHHHHhhcccCCCCceEEEEEEEc-CCcE--EEEEEccCcc-chhHHHHHHHHHHHhhc-CCCCccceeeEEEecCeeEE
Q 008707 234 EATNNFCKKIGKGSFGSVYYGKMK-DGKE--VAVKIMADSC-SHRTQQFVTEVALLSRI-HHRNLVPLIGYCEEEHQRIL 308 (557)
Q Consensus 234 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~--vavK~~~~~~-~~~~~~~~~E~~il~~l-~h~nIv~~~~~~~~~~~~~l 308 (557)
...|++.+.||+|+||.||+|.+. ++.. +|+|.+.... ....+.+.+|+++++++ +||||+++++++.+.+..++
T Consensus 24 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~l 103 (327)
T 1fvr_A 24 WNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYL 103 (327)
T ss_dssp GGGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTEEEE
T ss_pred HHHccceeeeecCCCceEEEEEEccCCcccceeeeeeccccchHHHHHHHHHHHHHHhccCCCchhhhceeeeeCCceEE
Confidence 345667899999999999999865 4554 4899886532 33446788999999999 89999999999999999999
Q ss_pred EEEecCCCChhhhhhccC-------------CCCCcCHHHHHHHHHHHHHHHHHHHcCCCCCeEeeccCCCCEEeCCCCc
Q 008707 309 VYEYMHNGTLRDRLHGSV-------------NQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMR 375 (557)
Q Consensus 309 v~e~~~~gsL~~~l~~~~-------------~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~dlk~~NIll~~~~~ 375 (557)
||||+++|+|.+++.... ....+++..++.++.||+.||+|||+ .+++||||||+||+++.++.
T Consensus 104 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~dlkp~NIl~~~~~~ 180 (327)
T 1fvr_A 104 AIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQ---KQFIHRDLAARNILVGENYV 180 (327)
T ss_dssp EECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECGGGC
T ss_pred EEecCCCCCHHHHHHhcccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHh---CCccCCCCccceEEEcCCCe
Confidence 999999999999997531 13468999999999999999999998 99999999999999999999
Q ss_pred EEEecccCccccCCCCccccccccCCCCccCCcccCCCCCCcccceehhHHHHHHHHh-CCCCCCCCCccccccHHHHHH
Q 008707 376 AKVSDFGLSRQAEEDLTHISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELIS-GKKPVSVEDFGAELNIVHWAR 454 (557)
Q Consensus 376 ~kl~Dfgla~~~~~~~~~~~~~~~g~~~y~aPE~l~~~~~s~~~DvwslG~ll~ellt-g~~pf~~~~~~~~~~~~~~~~ 454 (557)
+||+|||++........ .....+++.|+|||.+.+..++.++||||||+++|+|+| |+.||...... + ..
T Consensus 181 ~kL~Dfg~~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~------~-~~ 251 (327)
T 1fvr_A 181 AKIADFGLSRGQEVYVK--KTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCA------E-LY 251 (327)
T ss_dssp EEECCTTCEESSCEECC--C----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCHH------H-HH
T ss_pred EEEcccCcCcccccccc--ccCCCCCccccChhhhccccCCchhcchHHHHHHHHHHcCCCCCCCCCcHH------H-HH
Confidence 99999999875432211 122346889999999988889999999999999999998 99999744321 1 11
Q ss_pred HHHhcCCccccccccccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhhhhhc
Q 008707 455 SMIKKGDVISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKIEK 515 (557)
Q Consensus 455 ~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~evl~~L~~~~~~~~ 515 (557)
..+..+... ..+...+..+.+++.+||+.+|++|||++|+++.|+++.....
T Consensus 252 ~~~~~~~~~---------~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~~ 303 (327)
T 1fvr_A 252 EKLPQGYRL---------EKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLEERK 303 (327)
T ss_dssp HHGGGTCCC---------CCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHSSS
T ss_pred HHhhcCCCC---------CCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHhhc
Confidence 222222111 1111223478899999999999999999999999999987543
No 154
>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...
Probab=100.00 E-value=9.3e-40 Score=322.95 Aligned_cols=259 Identities=24% Similarity=0.303 Sum_probs=205.0
Q ss_pred HHHHHhhcccCCCCceEEEEEEEc-CCcEEEEEEccCccc------hhHHHHHHHHHHHhhcCCCCccceeeEEEecCee
Q 008707 234 EATNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCS------HRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQR 306 (557)
Q Consensus 234 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~------~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~ 306 (557)
...|++.+.||+|+||.||+|... +++.||+|++..... ...+.+.+|+++++.++||||+++++++.+.+..
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~ 83 (283)
T 3bhy_A 4 EDHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKTDV 83 (283)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEE
T ss_pred hhhhhhHHhhcccCceEEEEEEEcCCCCeeehHHhhhccccccccchHHHHHHHHHHHHHhCCCCCeeehhheecCCCeE
Confidence 345677899999999999999887 689999999864321 1357789999999999999999999999999999
Q ss_pred EEEEEecCCCChhhhhhccCCCCCcCHHHHHHHHHHHHHHHHHHHcCCCCCeEeeccCCCCEEeCCCC----cEEEeccc
Q 008707 307 ILVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINM----RAKVSDFG 382 (557)
Q Consensus 307 ~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~dlk~~NIll~~~~----~~kl~Dfg 382 (557)
++||||+++++|.+++.. ...+++..+..++.|++.||+|||+ .+++||||||+||+++.++ .+||+|||
T Consensus 84 ~lv~e~~~~~~L~~~l~~---~~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dl~p~Nil~~~~~~~~~~~kl~dfg 157 (283)
T 3bhy_A 84 VLILELVSGGELFDFLAE---KESLTEDEATQFLKQILDGVHYLHS---KRIAHFDLKPENIMLLDKNVPNPRIKLIDFG 157 (283)
T ss_dssp EEEEECCCSCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEESCSSSSSCCEEECCCT
T ss_pred EEEEeecCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHh---CCccCCCCChHHEEEecCCCCCCceEEEecc
Confidence 999999999999999974 3568999999999999999999998 9999999999999998877 79999999
Q ss_pred CccccCCCCccccccccCCCCccCCcccCCCCCCcccceehhHHHHHHHHhCCCCCCCCCccccccHHHHHHHHHhcCCc
Q 008707 383 LSRQAEEDLTHISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDV 462 (557)
Q Consensus 383 la~~~~~~~~~~~~~~~g~~~y~aPE~l~~~~~s~~~DvwslG~ll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 462 (557)
++........ .....|++.|+|||.+.+..++.++||||||+++|+|++|+.||....... .. ..+.....
T Consensus 158 ~~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~------~~-~~~~~~~~ 228 (283)
T 3bhy_A 158 IAHKIEAGNE--FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQE------TL-TNISAVNY 228 (283)
T ss_dssp TCEECC----------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSSHHH------HH-HHHHTTCC
T ss_pred cceeccCCCc--ccccCCCcCccCcceecCCCCCcchhhhhHHHHHHHHHHCCCCCCCcchHH------HH-HHhHhccc
Confidence 9987644322 123358999999999999999999999999999999999999997543211 11 11111111
Q ss_pred cccccccccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH--HHHhhhhh
Q 008707 463 ISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL--AIQDSIKI 513 (557)
Q Consensus 463 ~~~~d~~l~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~evl~--~L~~~~~~ 513 (557)
. .++..... .+..+.+++.+||+.||++|||+.|+++ .++.+...
T Consensus 229 ~--~~~~~~~~----~~~~~~~li~~~l~~dp~~Rps~~~~l~h~~~~~~~~~ 275 (283)
T 3bhy_A 229 D--FDEEYFSN----TSELAKDFIRRLLVKDPKRRMTIAQSLEHSWIKAIRRR 275 (283)
T ss_dssp C--CCHHHHTT----CCHHHHHHHHTTSCSSGGGSCCHHHHHHCHHHHHHHHC
T ss_pred C--Ccchhccc----CCHHHHHHHHHHccCCHhHCcCHHHHHhCHHHHHHHHH
Confidence 0 00001111 1236889999999999999999999997 45555443
No 155
>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*
Probab=100.00 E-value=4.7e-41 Score=340.43 Aligned_cols=263 Identities=26% Similarity=0.421 Sum_probs=209.9
Q ss_pred HHHHhhcccCCCCceEEEEEEEcC------CcEEEEEEccCcc-chhHHHHHHHHHHHhhc-CCCCccceeeEEEecCee
Q 008707 235 ATNNFCKKIGKGSFGSVYYGKMKD------GKEVAVKIMADSC-SHRTQQFVTEVALLSRI-HHRNLVPLIGYCEEEHQR 306 (557)
Q Consensus 235 ~~~~~~~~lG~G~~g~Vy~~~~~~------~~~vavK~~~~~~-~~~~~~~~~E~~il~~l-~h~nIv~~~~~~~~~~~~ 306 (557)
..|++.+.||+|+||.||+|.+.. ...||+|.+.... ....+.+.+|+++++.+ +||||+++++++.+.+..
T Consensus 46 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~ 125 (333)
T 2i1m_A 46 NNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPV 125 (333)
T ss_dssp TSEEEEEEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSC
T ss_pred HHceeeeEeccCCCcceEEEEecCCCcccchhHHHHHhcccccChHHHHHHHHHHHHHHhhcCCCCeeeEEEEEecCCce
Confidence 445668999999999999998753 2479999987643 33456789999999999 899999999999999999
Q ss_pred EEEEEecCCCChhhhhhccC-----------CCCCcCHHHHHHHHHHHHHHHHHHHcCCCCCeEeeccCCCCEEeCCCCc
Q 008707 307 ILVYEYMHNGTLRDRLHGSV-----------NQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMR 375 (557)
Q Consensus 307 ~lv~e~~~~gsL~~~l~~~~-----------~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~dlk~~NIll~~~~~ 375 (557)
++||||+++|+|.+++.... ....+++..++.++.|++.||+|||+ .+++||||||+||+++.++.
T Consensus 126 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~Dlkp~NIl~~~~~~ 202 (333)
T 2i1m_A 126 LVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLAS---KNCIHRDVAARNVLLTNGHV 202 (333)
T ss_dssp EEEEECCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGCEEEGGGE
T ss_pred EEEEecCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHHHHHHHHHhc---CCcccCCcccceEEECCCCe
Confidence 99999999999999987532 13457899999999999999999998 99999999999999999999
Q ss_pred EEEecccCccccCCCCc-cccccccCCCCccCCcccCCCCCCcccceehhHHHHHHHHh-CCCCCCCCCccccccHHHHH
Q 008707 376 AKVSDFGLSRQAEEDLT-HISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELIS-GKKPVSVEDFGAELNIVHWA 453 (557)
Q Consensus 376 ~kl~Dfgla~~~~~~~~-~~~~~~~g~~~y~aPE~l~~~~~s~~~DvwslG~ll~ellt-g~~pf~~~~~~~~~~~~~~~ 453 (557)
+||+|||++........ .......+++.|+|||.+.+..++.++||||||+++|+|+| |..||........ ..
T Consensus 203 ~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~--~~--- 277 (333)
T 2i1m_A 203 AKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSK--FY--- 277 (333)
T ss_dssp EEBCCCGGGCCGGGCTTSEECSSCEECGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCSSHH--HH---
T ss_pred EEECccccccccccccceeecCCCCCCccccCHHHhccCCCChHHHHHHHHHHHHHHHcCCCCCCcccchhHH--HH---
Confidence 99999999986543322 12223446789999999988899999999999999999999 9999975433211 11
Q ss_pred HHHHhcCCccccccccccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhhhhhc
Q 008707 454 RSMIKKGDVISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKIEK 515 (557)
Q Consensus 454 ~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~evl~~L~~~~~~~~ 515 (557)
.....+.... .+...+..+.+++.+||+.||.+|||++||++.|+++.....
T Consensus 278 -~~~~~~~~~~---------~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~~~~~~ 329 (333)
T 2i1m_A 278 -KLVKDGYQMA---------QPAFAPKNIYSIMQACWALEPTHRPTFQQICSFLQEQAQEDR 329 (333)
T ss_dssp -HHHHHTCCCC---------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHH
T ss_pred -HHHhcCCCCC---------CCCCCCHHHHHHHHHHhccChhhCcCHHHHHHHHHHHHHhhh
Confidence 1222221110 011123478899999999999999999999999999876543
No 156
>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}
Probab=100.00 E-value=3.4e-40 Score=334.37 Aligned_cols=242 Identities=23% Similarity=0.308 Sum_probs=199.2
Q ss_pred HHHHHhhcccCCCCceEEEEEEEc-CCcEEEEEEccCccc--------hhHHHHHHHHHHHhhcCCCCccceeeEEEecC
Q 008707 234 EATNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCS--------HRTQQFVTEVALLSRIHHRNLVPLIGYCEEEH 304 (557)
Q Consensus 234 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--------~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~ 304 (557)
...|++.+.||+|+||.||+|... +++.||+|++..... ...+.+.+|+++++.++||||+++++++.+.+
T Consensus 23 ~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~ 102 (335)
T 3dls_A 23 SQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANIIKVLDIFENQG 102 (335)
T ss_dssp HHHEEEEEECSSSSSCSEEEEEETTTTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTCCCTTBCCEEEEEECSS
T ss_pred ccceEEEeEEEecCCEEEEEEEECCCCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEeeCC
Confidence 355667899999999999999865 688999999865421 12345778999999999999999999999999
Q ss_pred eeEEEEEecCCC-ChhhhhhccCCCCCcCHHHHHHHHHHHHHHHHHHHcCCCCCeEeeccCCCCEEeCCCCcEEEecccC
Q 008707 305 QRILVYEYMHNG-TLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGL 383 (557)
Q Consensus 305 ~~~lv~e~~~~g-sL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfgl 383 (557)
..++||||+.+| +|.+++.. ...+++..+..++.||+.||+|||+ .+|+||||||+|||++.++.+||+|||+
T Consensus 103 ~~~lv~e~~~~g~~l~~~~~~---~~~l~~~~~~~i~~qi~~~L~~LH~---~~ivH~Dlkp~NIll~~~~~~kL~Dfg~ 176 (335)
T 3dls_A 103 FFQLVMEKHGSGLDLFAFIDR---HPRLDEPLASYIFRQLVSAVGYLRL---KDIIHRDIKDENIVIAEDFTIKLIDFGS 176 (335)
T ss_dssp EEEEEEECCTTSCBHHHHHHT---CCCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTSCEEECCCTT
T ss_pred EEEEEEEeCCCCccHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHh---CCeEEeccCHHHEEEcCCCcEEEeeccc
Confidence 999999999776 99999873 4569999999999999999999998 9999999999999999999999999999
Q ss_pred ccccCCCCccccccccCCCCccCCcccCCCCC-CcccceehhHHHHHHHHhCCCCCCCCCccccccHHHHHHHHHhcCCc
Q 008707 384 SRQAEEDLTHISSVARGTVGYLDPEYYGNQQL-TEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDV 462 (557)
Q Consensus 384 a~~~~~~~~~~~~~~~g~~~y~aPE~l~~~~~-s~~~DvwslG~ll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 462 (557)
+........ .....||+.|+|||.+.+..+ +.++||||||+++|+|++|+.||......
T Consensus 177 a~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~------------------ 236 (335)
T 3dls_A 177 AAYLERGKL--FYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPFCELEET------------------ 236 (335)
T ss_dssp CEECCTTCC--BCEECSCGGGCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSCSSGGGG------------------
T ss_pred ceECCCCCc--eeccCCCccccChhhhcCCCCCCCcccchhHHHHHHHHHhCCCchhhHHHH------------------
Confidence 987654332 223458999999999988776 88999999999999999999999732110
Q ss_pred cccccccccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 008707 463 ISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLA 506 (557)
Q Consensus 463 ~~~~d~~l~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~evl~~ 506 (557)
...... .+......+.+++.+||+.||++|||++|+++.
T Consensus 237 ---~~~~~~--~~~~~~~~l~~li~~~L~~dP~~Rps~~ell~h 275 (335)
T 3dls_A 237 ---VEAAIH--PPYLVSKELMSLVSGLLQPVPERRTTLEKLVTD 275 (335)
T ss_dssp ---TTTCCC--CSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHHC
T ss_pred ---HhhccC--CCcccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 000000 000123368899999999999999999999874
No 157
>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*
Probab=100.00 E-value=9.2e-40 Score=332.82 Aligned_cols=246 Identities=29% Similarity=0.424 Sum_probs=198.6
Q ss_pred HHHHhhcccCCCCceEEEEEEE-cCCcEEEEEEccCcc---chhHHHHHHHHHHHhhcCCCCccceeeEEEecCeeEEEE
Q 008707 235 ATNNFCKKIGKGSFGSVYYGKM-KDGKEVAVKIMADSC---SHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVY 310 (557)
Q Consensus 235 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~lv~ 310 (557)
..|+..+.||+|+||.||+|.. .+++.||||++.... ....+.+.+|+++++.++||||+++++++.+.+..++||
T Consensus 54 ~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~ 133 (348)
T 1u5q_A 54 KLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVM 133 (348)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEESCSSCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred hheeeeeEEccCCCEEEEEEEEccCCeEEEEEEEccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCeEEEEE
Confidence 4456678999999999999986 468999999986432 233467889999999999999999999999999999999
Q ss_pred EecCCCChhhhhhccCCCCCcCHHHHHHHHHHHHHHHHHHHcCCCCCeEeeccCCCCEEeCCCCcEEEecccCccccCCC
Q 008707 311 EYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEED 390 (557)
Q Consensus 311 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfgla~~~~~~ 390 (557)
||+. |+|.+.+... ...+++..+..++.|+++||+|||+ .+|+||||||+|||++.++.+||+|||++......
T Consensus 134 e~~~-g~l~~~l~~~--~~~l~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~ 207 (348)
T 1u5q_A 134 EYCL-GSASDLLEVH--KKPLQEVEIAAVTHGALQGLAYLHS---HNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPA 207 (348)
T ss_dssp ECCS-EEHHHHHHHH--TSCCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCSGGGEEEETTTEEEECCCTTCBSSSSB
T ss_pred ecCC-CCHHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHh---CCeeeCCCCHHHEEECCCCCEEEeeccCceecCCC
Confidence 9996 6888877643 4568999999999999999999998 89999999999999999999999999999876432
Q ss_pred CccccccccCCCCccCCcccC---CCCCCcccceehhHHHHHHHHhCCCCCCCCCccccccHHHHHHHHHhcCCcccccc
Q 008707 391 LTHISSVARGTVGYLDPEYYG---NQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVD 467 (557)
Q Consensus 391 ~~~~~~~~~g~~~y~aPE~l~---~~~~s~~~DvwslG~ll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 467 (557)
....||+.|+|||++. ...++.++||||||+++|||++|+.||...+. ......... +.......
T Consensus 208 -----~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~------~~~~~~~~~-~~~~~~~~ 275 (348)
T 1u5q_A 208 -----NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNA------MSALYHIAQ-NESPALQS 275 (348)
T ss_dssp -----CCCCSCGGGCCHHHHHTTSSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCH------HHHHHHHHH-SCCCCCCC
T ss_pred -----CcccCCcceeCHhhhccccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCh------HHHHHHHHh-cCCCCCCC
Confidence 2345899999999984 56789999999999999999999999974332 111122222 21111111
Q ss_pred ccccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 008707 468 PVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLA 506 (557)
Q Consensus 468 ~~l~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~evl~~ 506 (557)
. ..+..+.+++.+||+.||++|||++|+++.
T Consensus 276 ----~----~~~~~l~~li~~~l~~dP~~Rps~~~ll~h 306 (348)
T 1u5q_A 276 ----G----HWSEYFRNFVDSCLQKIPQDRPTSEVLLKH 306 (348)
T ss_dssp ----T----TSCHHHHHHHHHHTCSSGGGSCCHHHHTTC
T ss_pred ----C----CCCHHHHHHHHHHcccChhhCcCHHHHhhC
Confidence 1 123468899999999999999999999864
No 158
>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*
Probab=100.00 E-value=1e-40 Score=342.42 Aligned_cols=249 Identities=26% Similarity=0.343 Sum_probs=192.4
Q ss_pred HHHHhhcccCCCCceEEEEEEEc-CCcEEEEEEccCccc---hhHHHHHHHHHH-HhhcCCCCccceeeEEEecCeeEEE
Q 008707 235 ATNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCS---HRTQQFVTEVAL-LSRIHHRNLVPLIGYCEEEHQRILV 309 (557)
Q Consensus 235 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~i-l~~l~h~nIv~~~~~~~~~~~~~lv 309 (557)
..|++.+.||+|+||.||+|+.+ +++.||+|++.+... ...+.+.+|..+ ++.++||||+++++++.+.+..++|
T Consensus 38 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~e~~~ll~~~~hp~Iv~l~~~~~~~~~~~lv 117 (373)
T 2r5t_A 38 SDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFV 117 (373)
T ss_dssp GGEEEEEEEECCTTCEEEEEEETTTCCEEEEEEEEGGGBC-------------CCBCCCCCTTBCCEEEEEECSSEEEEE
T ss_pred hheEEEEEEeeCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHHhCCCCCCCCEEEEEEeCCEEEEE
Confidence 34567899999999999999886 478999999865432 233456677776 5678999999999999999999999
Q ss_pred EEecCCCChhhhhhccCCCCCcCHHHHHHHHHHHHHHHHHHHcCCCCCeEeeccCCCCEEeCCCCcEEEecccCccccCC
Q 008707 310 YEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEE 389 (557)
Q Consensus 310 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfgla~~~~~ 389 (557)
|||++||+|.+++.. ...+++..+..++.||+.||+|||+ ++|+||||||+|||++.++.+||+|||+++....
T Consensus 118 ~E~~~gg~L~~~l~~---~~~~~~~~~~~~~~qi~~aL~~LH~---~givHrDlkp~NIll~~~g~ikL~DFG~a~~~~~ 191 (373)
T 2r5t_A 118 LDYINGGELFYHLQR---ERCFLEPRARFYAAEIASALGYLHS---LNIVYRDLKPENILLDSQGHIVLTDFGLCKENIE 191 (373)
T ss_dssp EECCCSCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTSCEEECCCCBCGGGBC
T ss_pred EeCCCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHH---CCceecCCCHHHEEECCCCCEEEeeCcccccccc
Confidence 999999999999974 3568899999999999999999998 9999999999999999999999999999986433
Q ss_pred CCccccccccCCCCccCCcccCCCCCCcccceehhHHHHHHHHhCCCCCCCCCccccccHHHHHHHHHhcCCcccccccc
Q 008707 390 DLTHISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPV 469 (557)
Q Consensus 390 ~~~~~~~~~~g~~~y~aPE~l~~~~~s~~~DvwslG~ll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 469 (557)
... ......||+.|+|||++.+..++.++|||||||++|||++|..||...+.. +.... +..+...
T Consensus 192 ~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~------~~~~~-i~~~~~~------ 257 (373)
T 2r5t_A 192 HNS-TTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTA------EMYDN-ILNKPLQ------ 257 (373)
T ss_dssp CCC-CCCSBSCCCCCCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSBHH------HHHHH-HHHSCCC------
T ss_pred CCC-ccccccCCccccCHHHhCCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCHH------HHHHH-HHhcccC------
Confidence 221 233456999999999999999999999999999999999999999744321 11111 1122111
Q ss_pred ccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHH
Q 008707 470 LIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAI 507 (557)
Q Consensus 470 l~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~evl~~L 507 (557)
+... ....+.+++.+||+.||.+||++.+.++.+
T Consensus 258 ~~~~----~~~~~~~li~~lL~~dp~~R~~~~~~~~~i 291 (373)
T 2r5t_A 258 LKPN----ITNSARHLLEGLLQKDRTKRLGAKDDFMEI 291 (373)
T ss_dssp CCSS----SCHHHHHHHHHHTCSSGGGSTTTTTTHHHH
T ss_pred CCCC----CCHHHHHHHHHHcccCHHhCCCCCCCHHHH
Confidence 1111 223688999999999999999986444333
No 159
>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*
Probab=100.00 E-value=6.3e-41 Score=353.30 Aligned_cols=247 Identities=24% Similarity=0.336 Sum_probs=192.4
Q ss_pred HHHhhcccCCCCceEEEEEEEc-CCcEEEEEEccCc---cchhHHHHHHHHHHHhhcCCCCccceeeEEEecCeeEEEEE
Q 008707 236 TNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADS---CSHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYE 311 (557)
Q Consensus 236 ~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~lv~e 311 (557)
.|++.+.||+|+||.||+|... +|+.||+|++... .......+.+|+++++.++||||+++++++.+.+..++|||
T Consensus 149 ~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e 228 (446)
T 4ejn_A 149 EFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVME 228 (446)
T ss_dssp GEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHC-------------CCCCCSCTTSCCEEEEEEETTEEEEEEC
T ss_pred HcEEeEEEeeCcCEEEEEEEEcCCCCEEEEEEEEhhhhhhhHHHHHHHHHHHHHHhCCCCeEeeEEEEEeeCCEEEEEEe
Confidence 4566889999999999999875 6899999998643 22334567889999999999999999999999999999999
Q ss_pred ecCCCChhhhhhccCCCCCcCHHHHHHHHHHHHHHHHHHHcCCCCCeEeeccCCCCEEeCCCCcEEEecccCccccCCCC
Q 008707 312 YMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEEDL 391 (557)
Q Consensus 312 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfgla~~~~~~~ 391 (557)
|+++|+|.+++.. ...+++..+..++.||+.||+|||+ ..||+||||||+|||++.++.+||+|||++.......
T Consensus 229 ~~~~~~L~~~l~~---~~~~~~~~~~~~~~qi~~aL~~LH~--~~giiHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~ 303 (446)
T 4ejn_A 229 YANGGELFFHLSR---ERVFSEDRARFYGAEIVSALDYLHS--EKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDG 303 (446)
T ss_dssp CCSSCBHHHHHHH---HSCCCHHHHHHHHHHHHHHHHHHHH--HTCCCCCCCCGGGEEECSSSCEEECCCCCCCTTCC--
T ss_pred eCCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHhh--cCCEEECCCCHHHEEECCCCCEEEccCCCceeccCCC
Confidence 9999999999874 3568999999999999999999995 2799999999999999999999999999998643332
Q ss_pred ccccccccCCCCccCCcccCCCCCCcccceehhHHHHHHHHhCCCCCCCCCccccccHHHHHHHHHhcCCcccccccccc
Q 008707 392 THISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPVLI 471 (557)
Q Consensus 392 ~~~~~~~~g~~~y~aPE~l~~~~~s~~~DvwslG~ll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~ 471 (557)
.. .....||+.|+|||++.+..++.++|||||||++|||++|+.||...+... + ... +..+...
T Consensus 304 ~~-~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~---~---~~~-i~~~~~~-------- 367 (446)
T 4ejn_A 304 AT-MKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEK---L---FEL-ILMEEIR-------- 367 (446)
T ss_dssp ----CCSSSCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH---H---HHH-HHHCCCC--------
T ss_pred cc-cccccCCccccCHhhcCCCCCCCccchhhhHHHHHHHhhCCCCCCCCCHHH---H---HHH-HHhCCCC--------
Confidence 22 234569999999999999999999999999999999999999997443221 1 111 1111110
Q ss_pred CCCCHHHHHHHHHHHHHccccCCCCCC-----CHHHHHH
Q 008707 472 GNVKIESIWRIAEVAIQCVEQRGFSRP-----KMQEIVL 505 (557)
Q Consensus 472 ~~~~~~~~~~l~~li~~cl~~~P~~RP-----t~~evl~ 505 (557)
.+......+.+++.+||+.||++|| +++|+++
T Consensus 368 --~p~~~~~~~~~li~~~L~~dP~~R~~~~~~t~~ell~ 404 (446)
T 4ejn_A 368 --FPRTLGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQ 404 (446)
T ss_dssp --CCTTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHT
T ss_pred --CCccCCHHHHHHHHHHcccCHHHhCCCCCCCHHHHHh
Confidence 1111234688999999999999999 9999986
No 160
>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*
Probab=100.00 E-value=3.8e-40 Score=327.73 Aligned_cols=246 Identities=24% Similarity=0.351 Sum_probs=201.8
Q ss_pred HHhhcccCCCCceEEEEEEEc-CCcEEEEEEccCcc---chhHHHHHHHHHHHhhcCCCCccceeeEEEecCeeEEEEEe
Q 008707 237 NNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSC---SHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYEY 312 (557)
Q Consensus 237 ~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~lv~e~ 312 (557)
|.+.+.||+|+||.||++... +++.||+|++.... ....+.+.+|+.+++.++||||+++++++.+.+..++||||
T Consensus 17 y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 96 (294)
T 2rku_A 17 YVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLEL 96 (294)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred eEEEEEEeecCCEEEEEEEECCCCceEEEEEechhhccCHHHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCEEEEEEec
Confidence 445789999999999999876 47899999986432 23456788999999999999999999999999999999999
Q ss_pred cCCCChhhhhhccCCCCCcCHHHHHHHHHHHHHHHHHHHcCCCCCeEeeccCCCCEEeCCCCcEEEecccCccccCCCCc
Q 008707 313 MHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEEDLT 392 (557)
Q Consensus 313 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfgla~~~~~~~~ 392 (557)
+++++|.+++.. ...+++..+..++.|+++||+|||+ .+++||||||+||+++.++.+||+|||++........
T Consensus 97 ~~~~~L~~~~~~---~~~~~~~~~~~i~~qi~~~l~~lH~---~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~ 170 (294)
T 2rku_A 97 CRRRSLLELHKR---RKALTEPEARYYLRQIVLGCQYLHR---NRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGE 170 (294)
T ss_dssp CTTCBHHHHHHH---HCSCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTCCEEECCCTTCEECCSTTC
T ss_pred CCCCCHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHH---CCccccCCChHhEEEcCCCCEEEEeccCceecccCcc
Confidence 999999998874 3568999999999999999999998 9999999999999999999999999999987643322
Q ss_pred cccccccCCCCccCCcccCCCCCCcccceehhHHHHHHHHhCCCCCCCCCccccccHHHHHHHHHhcCCccccccccccC
Q 008707 393 HISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPVLIG 472 (557)
Q Consensus 393 ~~~~~~~g~~~y~aPE~l~~~~~s~~~DvwslG~ll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~ 472 (557)
. .....|++.|+|||.+.+..++.++||||||+++|+|++|+.||....... ... .+..+.. .+..
T Consensus 171 ~-~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~------~~~-~~~~~~~------~~~~ 236 (294)
T 2rku_A 171 R-KKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKE------TYL-RIKKNEY------SIPK 236 (294)
T ss_dssp C-BCCCCSCCSSCCHHHHTTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHHH------HHH-HHHTTCC------CCCT
T ss_pred c-cccccCCCCcCCcchhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH------HHH-HHhhccC------CCcc
Confidence 2 233458999999999999899999999999999999999999997443221 111 1111111 0111
Q ss_pred CCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 008707 473 NVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLA 506 (557)
Q Consensus 473 ~~~~~~~~~l~~li~~cl~~~P~~RPt~~evl~~ 506 (557)
.....+.+++.+||+.||++|||++|+++.
T Consensus 237 ----~~~~~~~~li~~~l~~~p~~Rps~~~ll~~ 266 (294)
T 2rku_A 237 ----HINPVAASLIQKMLQTDPTARPTINELLND 266 (294)
T ss_dssp ----TSCHHHHHHHHHHTCSSGGGSCCGGGGGGS
T ss_pred ----ccCHHHHHHHHHHcccChhhCcCHHHHhhC
Confidence 122368899999999999999999999863
No 161
>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*
Probab=100.00 E-value=9.6e-41 Score=337.39 Aligned_cols=265 Identities=27% Similarity=0.442 Sum_probs=207.1
Q ss_pred HHHHHHHhhcccCCCCceEEEEEEEc------CCcEEEEEEccCcc-chhHHHHHHHHHHHhhcCCCCccceeeEEEecC
Q 008707 232 LEEATNNFCKKIGKGSFGSVYYGKMK------DGKEVAVKIMADSC-SHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEH 304 (557)
Q Consensus 232 ~~~~~~~~~~~lG~G~~g~Vy~~~~~------~~~~vavK~~~~~~-~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~ 304 (557)
+....|++.+.||+|+||.||+|.+. +++.||+|++.... ......+.+|+.+++.++||||+++++++.+..
T Consensus 27 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~ 106 (327)
T 2yfx_A 27 VPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSL 106 (327)
T ss_dssp CCGGGCEEEEECC--CSSCEEEEEC--------CCEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS
T ss_pred CChhheEEEEEEcCCCCeeEEEEEEcCCCCCCccceEEEEEeccccchhhHHHHHHHHHHHhhCCCCCCCeEEEEEcCCC
Confidence 34456677899999999999999742 47789999986543 344567899999999999999999999999999
Q ss_pred eeEEEEEecCCCChhhhhhccCC----CCCcCHHHHHHHHHHHHHHHHHHHcCCCCCeEeeccCCCCEEeCC---CCcEE
Q 008707 305 QRILVYEYMHNGTLRDRLHGSVN----QKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDI---NMRAK 377 (557)
Q Consensus 305 ~~~lv~e~~~~gsL~~~l~~~~~----~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~dlk~~NIll~~---~~~~k 377 (557)
..++||||+++++|.+++..... ...+++..++.++.|++.||+|||+ .+++||||||+||+++. +..+|
T Consensus 107 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~---~~i~H~dlkp~NIli~~~~~~~~~k 183 (327)
T 2yfx_A 107 PRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEE---NHFIHRDIAARNCLLTCPGPGRVAK 183 (327)
T ss_dssp SCEEEEECCTTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEESCSSTTCCEE
T ss_pred CcEEEEecCCCCcHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHHHhh---CCeecCcCCHhHEEEecCCCcceEE
Confidence 99999999999999999976431 2458999999999999999999998 99999999999999984 44699
Q ss_pred EecccCccccCCCCc-cccccccCCCCccCCcccCCCCCCcccceehhHHHHHHHHh-CCCCCCCCCccccccHHHHHHH
Q 008707 378 VSDFGLSRQAEEDLT-HISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELIS-GKKPVSVEDFGAELNIVHWARS 455 (557)
Q Consensus 378 l~Dfgla~~~~~~~~-~~~~~~~g~~~y~aPE~l~~~~~s~~~DvwslG~ll~ellt-g~~pf~~~~~~~~~~~~~~~~~ 455 (557)
|+|||++........ .......+++.|+|||.+.+..++.++||||||+++|+|+| |..||...... + ...
T Consensus 184 l~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~------~-~~~ 256 (327)
T 2yfx_A 184 IGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQ------E-VLE 256 (327)
T ss_dssp ECCCHHHHHHHC------CCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHH------H-HHH
T ss_pred ECccccccccccccccccCCCcCCCcceeCHhHhcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCcCHH------H-HHH
Confidence 999999875433221 12223447889999999988889999999999999999998 99999743321 1 112
Q ss_pred HHhcCCccccccccccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhhhhhc
Q 008707 456 MIKKGDVISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKIEK 515 (557)
Q Consensus 456 ~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~evl~~L~~~~~~~~ 515 (557)
.+..+.... .....+..+.+++.+||+.||.+|||+.||++.|+.+.....
T Consensus 257 ~~~~~~~~~---------~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~~~~~~~ 307 (327)
T 2yfx_A 257 FVTSGGRMD---------PPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQDPD 307 (327)
T ss_dssp HHHTTCCCC---------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHCHH
T ss_pred HHhcCCCCC---------CCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHhcCHH
Confidence 222222111 111223478899999999999999999999999999887544
No 162
>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*
Probab=100.00 E-value=2.1e-40 Score=362.75 Aligned_cols=249 Identities=27% Similarity=0.460 Sum_probs=200.6
Q ss_pred cccCCCCceEEEEEEEc---CCcEEEEEEccCccc--hhHHHHHHHHHHHhhcCCCCccceeeEEEecCeeEEEEEecCC
Q 008707 241 KKIGKGSFGSVYYGKMK---DGKEVAVKIMADSCS--HRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYEYMHN 315 (557)
Q Consensus 241 ~~lG~G~~g~Vy~~~~~---~~~~vavK~~~~~~~--~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~lv~e~~~~ 315 (557)
+.||+|+||.||+|.+. .++.||||+++.... ...+.+.+|++++++++||||+++++++.. +..++||||+++
T Consensus 375 ~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~-~~~~lv~E~~~~ 453 (635)
T 4fl3_A 375 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEA-ESWMLVMEMAEL 453 (635)
T ss_dssp EEEEECSSEEEEEEEEECSSCEEEEEEEEECGGGGCGGGHHHHHHHHHHHHHCCCTTBCCEEEEEES-SSEEEEEECCTT
T ss_pred CEeccCCCEEEEEEEEcCCCcceEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEec-CCEEEEEEccCC
Confidence 47999999999999664 467899999875432 335789999999999999999999999965 458899999999
Q ss_pred CChhhhhhccCCCCCcCHHHHHHHHHHHHHHHHHHHcCCCCCeEeeccCCCCEEeCCCCcEEEecccCccccCCCCc--c
Q 008707 316 GTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEEDLT--H 393 (557)
Q Consensus 316 gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfgla~~~~~~~~--~ 393 (557)
|+|.+++.. ...+++..++.++.||+.||+|||+ ++|+||||||+|||++.++.+||+|||+++....... .
T Consensus 454 g~L~~~l~~---~~~l~~~~~~~i~~qi~~~L~yLH~---~~iiHrDLkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~ 527 (635)
T 4fl3_A 454 GPLNKYLQQ---NRHVKDKNIIELVHQVSMGMKYLEE---SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYK 527 (635)
T ss_dssp EEHHHHHHH---CTTCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEEEETTEEEECCTTHHHHTTC------
T ss_pred CCHHHHHhh---CCCCCHHHHHHHHHHHHHHHHHHHH---CCEeCCCCChHhEEEeCCCCEEEEEcCCccccccCccccc
Confidence 999999973 4568999999999999999999998 9999999999999999999999999999987654322 1
Q ss_pred ccccccCCCCccCCcccCCCCCCcccceehhHHHHHHHHh-CCCCCCCCCccccccHHHHHHHHHhcCCccccccccccC
Q 008707 394 ISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELIS-GKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPVLIG 472 (557)
Q Consensus 394 ~~~~~~g~~~y~aPE~l~~~~~s~~~DvwslG~ll~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~ 472 (557)
......+|+.|+|||++.+..++.++|||||||++|||++ |+.||.+.+... +...+..+.....
T Consensus 528 ~~~~~~~t~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~~-------~~~~i~~~~~~~~------- 593 (635)
T 4fl3_A 528 AQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSE-------VTAMLEKGERMGC------- 593 (635)
T ss_dssp -------CGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHH-------HHHHHHTTCCCCC-------
T ss_pred cccCCCCceeeeChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHH-------HHHHHHcCCCCCC-------
Confidence 2222346788999999999999999999999999999998 999997543221 2223333322211
Q ss_pred CCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhhh
Q 008707 473 NVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIK 512 (557)
Q Consensus 473 ~~~~~~~~~l~~li~~cl~~~P~~RPt~~evl~~L~~~~~ 512 (557)
+...+..+.+++.+||+.||++|||+++|++.|+++..
T Consensus 594 --p~~~~~~l~~li~~cl~~dP~~RPs~~~l~~~L~~~~~ 631 (635)
T 4fl3_A 594 --PAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYYY 631 (635)
T ss_dssp --CTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHH
T ss_pred --CCCCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHHH
Confidence 11234578899999999999999999999999998754
No 163
>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A
Probab=100.00 E-value=6.5e-40 Score=329.45 Aligned_cols=254 Identities=24% Similarity=0.339 Sum_probs=195.1
Q ss_pred hcccCCCCceEEEEEEEc-CCcEEEEEEccCccchhHHHHHHHHHHHhhc-CCCCccceeeEEEecCeeEEEEEecCCCC
Q 008707 240 CKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCSHRTQQFVTEVALLSRI-HHRNLVPLIGYCEEEHQRILVYEYMHNGT 317 (557)
Q Consensus 240 ~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~il~~l-~h~nIv~~~~~~~~~~~~~lv~e~~~~gs 317 (557)
.+.||+|+||.||+|... +++.||||++........+.+.+|++++.++ +||||+++++++.+.+..++||||+++|+
T Consensus 18 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~ 97 (316)
T 2ac3_A 18 EDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIEFFEEEDRFYLVFEKMRGGS 97 (316)
T ss_dssp CCCCCCCSSEEEEEEECSSSCCEEEEEEEECCSSCCHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCTTCB
T ss_pred CceecCCceEEEEEEEEcCCCcEEEEEEEeeCcchhHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEEEEEEEcCCCCc
Confidence 367999999999999865 6899999999766555567889999999985 79999999999999999999999999999
Q ss_pred hhhhhhccCCCCCcCHHHHHHHHHHHHHHHHHHHcCCCCCeEeeccCCCCEEeCCCCc---EEEecccCccccCCCCc--
Q 008707 318 LRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMR---AKVSDFGLSRQAEEDLT-- 392 (557)
Q Consensus 318 L~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~dlk~~NIll~~~~~---~kl~Dfgla~~~~~~~~-- 392 (557)
|.+++.. ...+++..+..++.||+.||+|||+ .+++||||||+||+++.++. +||+|||++........
T Consensus 98 L~~~l~~---~~~~~~~~~~~i~~qi~~~l~~lH~---~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~~~~~~~~~~~~ 171 (316)
T 2ac3_A 98 ILSHIHK---RRHFNELEASVVVQDVASALDFLHN---KGIAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGDCS 171 (316)
T ss_dssp HHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEESCSSSSCSEEECCTTCCC---------
T ss_pred HHHHHhc---cCCCCHHHHHHHHHHHHHHHHHHHh---CCceeCCCCHHHEEEccCCCcCceEEEEccCccccccCCccc
Confidence 9999974 3568999999999999999999998 89999999999999998776 99999999876532211
Q ss_pred ----cccccccCCCCccCCcccCC-----CCCCcccceehhHHHHHHHHhCCCCCCCCCccccc--------cHHHHHHH
Q 008707 393 ----HISSVARGTVGYLDPEYYGN-----QQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAEL--------NIVHWARS 455 (557)
Q Consensus 393 ----~~~~~~~g~~~y~aPE~l~~-----~~~s~~~DvwslG~ll~elltg~~pf~~~~~~~~~--------~~~~~~~~ 455 (557)
.......||+.|+|||++.+ ..++.++||||||+++|+|++|+.||......+.. ........
T Consensus 172 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (316)
T 2ac3_A 172 PISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEACPACQNMLFE 251 (316)
T ss_dssp ----------CCSGGGCCHHHHHHTSHHHHHHTTTHHHHHHHHHHHHHHHSSCSCCCCCCSCSCC----CCHHHHHHHHH
T ss_pred cccccccccccCCcCccChHHhhcccccccCCCcccccHhHHHHHHHHHHCCCCCcccccccccccccccchhHHHHHHH
Confidence 11123358999999999875 45788999999999999999999999854432100 00111122
Q ss_pred HHhcCCccccccccccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 008707 456 MIKKGDVISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 505 (557)
Q Consensus 456 ~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~evl~ 505 (557)
.+..+... ..+. .... .+..+.+++.+||+.||++|||++|+++
T Consensus 252 ~i~~~~~~-~~~~-~~~~----~~~~~~~li~~~L~~dP~~Rps~~e~l~ 295 (316)
T 2ac3_A 252 SIQEGKYE-FPDK-DWAH----ISCAAKDLISKLLVRDAKQRLSAAQVLQ 295 (316)
T ss_dssp HHHHCCCC-CCHH-HHTT----SCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred HHhccCcc-cCch-hccc----CCHHHHHHHHHHhhCChhhCCCHHHHhc
Confidence 22222211 0000 0011 2346889999999999999999999986
No 164
>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}
Probab=100.00 E-value=1.3e-39 Score=323.81 Aligned_cols=247 Identities=24% Similarity=0.365 Sum_probs=196.1
Q ss_pred cccCCCCceEEEEEEEc-CCcEEEEEEccCccchhHHHHHHHHHHHhhcCCCCccceeeEEEecCeeEEEEEecCCCChh
Q 008707 241 KKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCSHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYEYMHNGTLR 319 (557)
Q Consensus 241 ~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~lv~e~~~~gsL~ 319 (557)
..||+|+||.||+|... +++.||+|.+........+.+.+|+.+++.++||||+++++++...+..++||||+++++|.
T Consensus 28 ~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~ 107 (295)
T 2clq_A 28 VVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFSENGFIKIFMEQVPGGSLS 107 (295)
T ss_dssp CEEEECSSSEEEEEEETTTCCEEEEEEEECCCC---HHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCSEEEHH
T ss_pred EEEeecCcEEEEEEEECCCCeEEEEEEccCCchHHHHHHHHHHHHHHhCCCCCEeeEeeEEEeCCcEEEEEEeCCCCCHH
Confidence 57999999999999875 58899999987665556678999999999999999999999999999999999999999999
Q ss_pred hhhhccCCCCCcCHHHHHHHHHHHHHHHHHHHcCCCCCeEeeccCCCCEEeCC-CCcEEEecccCccccCCCCccccccc
Q 008707 320 DRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDI-NMRAKVSDFGLSRQAEEDLTHISSVA 398 (557)
Q Consensus 320 ~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~dlk~~NIll~~-~~~~kl~Dfgla~~~~~~~~~~~~~~ 398 (557)
+++........+++..+..++.|++.||+|||+ .+++|+||||+||+++. ++.+||+|||++........ .....
T Consensus 108 ~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dl~p~Nil~~~~~~~~kl~Dfg~~~~~~~~~~-~~~~~ 183 (295)
T 2clq_A 108 ALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHD---NQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINP-CTETF 183 (295)
T ss_dssp HHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEEETTTCCEEECCTTTCEESCC------CCC
T ss_pred HHHHhhccCCCccHHHHHHHHHHHHHHHHHHHh---CCEEccCCChhhEEEECCCCCEEEeecccccccCCCCC-ccccc
Confidence 999865444567788999999999999999998 99999999999999987 89999999999987644322 12334
Q ss_pred cCCCCccCCcccCCC--CCCcccceehhHHHHHHHHhCCCCCCCCCccccccHHHHHHHHHhcCCccccccccccCCCCH
Q 008707 399 RGTVGYLDPEYYGNQ--QLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPVLIGNVKI 476 (557)
Q Consensus 399 ~g~~~y~aPE~l~~~--~~s~~~DvwslG~ll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~ 476 (557)
.|++.|+|||.+.+. .++.++||||||+++|+|++|+.||........ ........ . ..+.+ +.
T Consensus 184 ~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~----~~~~~~~~-~-----~~~~~----~~ 249 (295)
T 2clq_A 184 TGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQA----AMFKVGMF-K-----VHPEI----PE 249 (295)
T ss_dssp CCCGGGCCHHHHHHGGGGCSHHHHHHHHHHHHHHHHHTSCTTGGGSSHHH----HHHHHHHH-C-----CCCCC----CT
T ss_pred CCCccccChhhhcCCCCCCCcHHHHHHHHHHHHHHHHCCCCccCCCchhH----HHHhhccc-c-----ccccc----cc
Confidence 589999999998764 378999999999999999999999973322111 00011010 0 01111 11
Q ss_pred HHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 008707 477 ESIWRIAEVAIQCVEQRGFSRPKMQEIVL 505 (557)
Q Consensus 477 ~~~~~l~~li~~cl~~~P~~RPt~~evl~ 505 (557)
..+..+.+++.+||+.||++|||+.|+++
T Consensus 250 ~~~~~~~~li~~~l~~dp~~Rps~~~ll~ 278 (295)
T 2clq_A 250 SMSAEAKAFILKCFEPDPDKRACANDLLV 278 (295)
T ss_dssp TSCHHHHHHHHHTTCSSTTTSCCHHHHHT
T ss_pred cCCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 22347889999999999999999999975
No 165
>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*
Probab=100.00 E-value=4.8e-40 Score=325.15 Aligned_cols=248 Identities=24% Similarity=0.347 Sum_probs=200.7
Q ss_pred HHhhcccCCCCceEEEEEEEc-CCcEEEEEEccCcc--chhHHHHHHHHHHHhhcCCCCccceeeEEEecCeeEEEEEec
Q 008707 237 NNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSC--SHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYEYM 313 (557)
Q Consensus 237 ~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~lv~e~~ 313 (557)
|++.+.||+|+||.||+|... +++.||+|++.... ....+.+.+|++++++++||||+++++++.+.+..++||||+
T Consensus 8 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~ 87 (284)
T 3kk8_A 8 YDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFDLV 87 (284)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCC
T ss_pred hhhhhhhcCcCCeEEEEEEEcCCCceEEEEEeecccCCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEcCCEEEEEEecC
Confidence 456789999999999999876 58899999986432 334567889999999999999999999999999999999999
Q ss_pred CCCChhhhhhccCCCCCcCHHHHHHHHHHHHHHHHHHHcCCCCCeEeeccCCCCEEeCCCCc---EEEecccCccccCCC
Q 008707 314 HNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMR---AKVSDFGLSRQAEED 390 (557)
Q Consensus 314 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~dlk~~NIll~~~~~---~kl~Dfgla~~~~~~ 390 (557)
++++|.+.+.. ...+++..+..++.|++.||+|||+ .+++||||||+||+++.++. +||+|||++......
T Consensus 88 ~~~~l~~~~~~---~~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dikp~Nil~~~~~~~~~~kl~Dfg~~~~~~~~ 161 (284)
T 3kk8_A 88 TGGELFEDIVA---REFYSEADASHCIQQILESIAYCHS---NGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDS 161 (284)
T ss_dssp CSCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGGGEEESSSSTTCCEEECCCTTCEECCSS
T ss_pred CCCCHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHH---CCcCcCCCCHHHEEEecCCCCCcEEEeeceeeEEcccC
Confidence 99999988874 3568999999999999999999998 99999999999999986655 999999999876543
Q ss_pred CccccccccCCCCccCCcccCCCCCCcccceehhHHHHHHHHhCCCCCCCCCccccccHHHHHHHHHhcCCccccccccc
Q 008707 391 LTHISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPVL 470 (557)
Q Consensus 391 ~~~~~~~~~g~~~y~aPE~l~~~~~s~~~DvwslG~ll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l 470 (557)
.. .....|++.|+|||.+.+..++.++||||||+++|+|++|+.||...+... . ...+..+.... ..+ .
T Consensus 162 ~~--~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~---~----~~~~~~~~~~~-~~~-~ 230 (284)
T 3kk8_A 162 EA--WHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHR---L----YAQIKAGAYDY-PSP-E 230 (284)
T ss_dssp CB--CCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH---H----HHHHHHTCCCC-CTT-T
T ss_pred cc--ccCCCCCcCCcCchhhcCCCCCcccchHHHHHHHHHHHHCCCCCCCCchhH---H----HHHHHhccccC-Cch-h
Confidence 32 223458999999999999999999999999999999999999997433211 1 11122221110 000 0
Q ss_pred cCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 008707 471 IGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 505 (557)
Q Consensus 471 ~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~evl~ 505 (557)
.. ..+..+.+++.+||+.||++|||++|+++
T Consensus 231 ~~----~~~~~~~~li~~~l~~dp~~Rps~~~~l~ 261 (284)
T 3kk8_A 231 WD----TVTPEAKSLIDSMLTVNPKKRITADQALK 261 (284)
T ss_dssp TT----TSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred hc----ccCHHHHHHHHHHcccChhhCCCHHHHhc
Confidence 01 12346889999999999999999999987
No 166
>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...
Probab=100.00 E-value=2.7e-40 Score=327.14 Aligned_cols=244 Identities=24% Similarity=0.360 Sum_probs=200.8
Q ss_pred HHHhhcccCCCCceEEEEEEEc-CCcEEEEEEccCcc---chhHHHHHHHHHHHhhcCCCCccceeeEEEecCeeEEEEE
Q 008707 236 TNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSC---SHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYE 311 (557)
Q Consensus 236 ~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~lv~e 311 (557)
.|++.+.||+|+||.||+|... +++.||+|++.... ....+.+.+|+++++.++||||+++++++.+.+..++|||
T Consensus 15 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 94 (284)
T 2vgo_A 15 DFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLMLE 94 (284)
T ss_dssp GEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred hceeeheecCCCCeEEEEEEEcCCCcEEEEEEEcccccchHHHHHHHHHHHHHHhcCCCCCEeeEEEEEEcCCEEEEEEE
Confidence 4556789999999999999876 57889999986432 1224678899999999999999999999999999999999
Q ss_pred ecCCCChhhhhhccCCCCCcCHHHHHHHHHHHHHHHHHHHcCCCCCeEeeccCCCCEEeCCCCcEEEecccCccccCCCC
Q 008707 312 YMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEEDL 391 (557)
Q Consensus 312 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfgla~~~~~~~ 391 (557)
|+++++|.+++.. ...+++..+..++.|+++||+|||+ .+++||||||+||+++.++.++|+|||++.......
T Consensus 95 ~~~~~~L~~~l~~---~~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~~ 168 (284)
T 2vgo_A 95 FAPRGELYKELQK---HGRFDEQRSATFMEELADALHYCHE---RKVIHRDIKPENLLMGYKGELKIADFGWSVHAPSLR 168 (284)
T ss_dssp CCTTEEHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHT---TTEECCCCSGGGEEECTTCCEEECCCTTCEECSSSC
T ss_pred eCCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHH---CCceecCCCHHHEEEcCCCCEEEecccccccCcccc
Confidence 9999999999874 3468999999999999999999998 999999999999999999999999999987654322
Q ss_pred ccccccccCCCCccCCcccCCCCCCcccceehhHHHHHHHHhCCCCCCCCCccccccHHHHHHHHHhcCCcccccccccc
Q 008707 392 THISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPVLI 471 (557)
Q Consensus 392 ~~~~~~~~g~~~y~aPE~l~~~~~s~~~DvwslG~ll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~ 471 (557)
.....|++.|+|||.+.+..++.++||||||+++|+|++|+.||....... ... .+..... .
T Consensus 169 ---~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~------~~~-~~~~~~~------~-- 230 (284)
T 2vgo_A 169 ---RRTMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTE------THR-RIVNVDL------K-- 230 (284)
T ss_dssp ---BCCCCSCGGGCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHH------HHH-HHHTTCC------C--
T ss_pred ---cccccCCCCcCCHHHhccCCCCcccchhhHHHHHHHHHHCCCCCCCCCHhH------HHH-HHhcccc------C--
Confidence 223458999999999999999999999999999999999999997443211 111 1111111 1
Q ss_pred CCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 008707 472 GNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 505 (557)
Q Consensus 472 ~~~~~~~~~~l~~li~~cl~~~P~~RPt~~evl~ 505 (557)
.+......+.+++.+|++.||.+|||++|+++
T Consensus 231 --~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~ 262 (284)
T 2vgo_A 231 --FPPFLSDGSKDLISKLLRYHPPQRLPLKGVME 262 (284)
T ss_dssp --CCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred --CCCcCCHHHHHHHHHHhhcCHhhCCCHHHHhh
Confidence 11112346889999999999999999999987
No 167
>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...
Probab=100.00 E-value=2.5e-40 Score=338.93 Aligned_cols=254 Identities=22% Similarity=0.317 Sum_probs=201.6
Q ss_pred HHHHhhcccCCCCceEEEEEEEc-CCcEEEEEEccCcc-chhHHHHHHHHHHHhhcCCCCccceeeEEEecCeeEEEEEe
Q 008707 235 ATNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSC-SHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYEY 312 (557)
Q Consensus 235 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~lv~e~ 312 (557)
..|++.+.||+|+||.||+|.+. +++.||+|++.... ....+.+.+|+++++.++||||+++++++.+++..++||||
T Consensus 33 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 112 (360)
T 3eqc_A 33 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEH 112 (360)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECCCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEETTEEEEEECC
T ss_pred ccceeeeeecCCCCeEEEEEEECCCCcEEEEEEeccccCHHHHHHHHHHHHHHHHCCCCCEEEEeEEEEECCEEEEEEEC
Confidence 34556789999999999999876 68999999987543 33456789999999999999999999999999999999999
Q ss_pred cCCCChhhhhhccCCCCCcCHHHHHHHHHHHHHHHHHHHcCCCC-CeEeeccCCCCEEeCCCCcEEEecccCccccCCCC
Q 008707 313 MHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNP-GIIHRDVKSSNILLDINMRAKVSDFGLSRQAEEDL 391 (557)
Q Consensus 313 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~-~ivH~dlk~~NIll~~~~~~kl~Dfgla~~~~~~~ 391 (557)
+++++|.+++.. ...+++..+..++.|++.||+|||+ . +|+||||||+||+++.++.+||+|||++.......
T Consensus 113 ~~~~~L~~~l~~---~~~~~~~~~~~i~~~i~~~l~~lh~---~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 186 (360)
T 3eqc_A 113 MDGGSLDQVLKK---AGRIPEQILGKVSIAVIKGLTYLRE---KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSM 186 (360)
T ss_dssp CTTCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHH---HHCCCCSCCSGGGEEECTTCCEEECCCCCCHHHHHHC
T ss_pred CCCCCHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHH---hCCEEcCCccHHHEEECCCCCEEEEECCCCccccccc
Confidence 999999999974 3468899999999999999999997 5 89999999999999999999999999987653221
Q ss_pred ccccccccCCCCccCCcccCCCCCCcccceehhHHHHHHHHhCCCCCCCCCccccccHH---------------------
Q 008707 392 THISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIV--------------------- 450 (557)
Q Consensus 392 ~~~~~~~~g~~~y~aPE~l~~~~~s~~~DvwslG~ll~elltg~~pf~~~~~~~~~~~~--------------------- 450 (557)
.....||+.|+|||++.+..++.++||||||+++|+|++|+.||...+........
T Consensus 187 ---~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (360)
T 3eqc_A 187 ---ANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRP 263 (360)
T ss_dssp -------CCCCTTCCHHHHTTCCCSHHHHHHHHHHHHHHHHHTSCCSSCCCHHHHHHHHC--------------------
T ss_pred ---ccCCCCCCCeECHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhcccccccCCCCCCCcccCCCc
Confidence 22345899999999999999999999999999999999999999754432110000
Q ss_pred ---------------HHHHHHHhcCCccccccccccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 008707 451 ---------------HWARSMIKKGDVISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLA 506 (557)
Q Consensus 451 ---------------~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~evl~~ 506 (557)
... ..+..+..... ........+.+++.+||+.||++|||++|+++.
T Consensus 264 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~--------~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 325 (360)
T 3eqc_A 264 LNKFGMDSRPPMAIFELL-DYIVNEPPPKL--------PSGVFSLEFQDFVNKCLIKNPAERADLKQLMVH 325 (360)
T ss_dssp ----------CCCHHHHH-HHHHHSCCCCC--------CTTTSCHHHHHHHHHHHCSSTTTSCCHHHHHTS
T ss_pred ccccccCCCCcccchhhh-hHHhccCCCCC--------CcccccHHHHHHHHHHhhcChhhCCCHHHHhhC
Confidence 000 00000000000 001123468899999999999999999999874
No 168
>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=2e-40 Score=338.83 Aligned_cols=252 Identities=26% Similarity=0.345 Sum_probs=201.4
Q ss_pred HHHhhcccCCCCceEEEEEEE----cCCcEEEEEEccCcc----chhHHHHHHHHHHHhhc-CCCCccceeeEEEecCee
Q 008707 236 TNNFCKKIGKGSFGSVYYGKM----KDGKEVAVKIMADSC----SHRTQQFVTEVALLSRI-HHRNLVPLIGYCEEEHQR 306 (557)
Q Consensus 236 ~~~~~~~lG~G~~g~Vy~~~~----~~~~~vavK~~~~~~----~~~~~~~~~E~~il~~l-~h~nIv~~~~~~~~~~~~ 306 (557)
.|++.+.||+|+||.||+|.. .+++.||||++.... ....+.+.+|+++++.+ +||||+++++++...+..
T Consensus 55 ~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~ 134 (355)
T 1vzo_A 55 NFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTETKL 134 (355)
T ss_dssp GEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETTEE
T ss_pred ceEEEEEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhhhhhHHHHHHHHHHHHHHccCCCceeEEEEEEeeCceE
Confidence 456789999999999999987 368999999986432 12345577899999999 699999999999999999
Q ss_pred EEEEEecCCCChhhhhhccCCCCCcCHHHHHHHHHHHHHHHHHHHcCCCCCeEeeccCCCCEEeCCCCcEEEecccCccc
Q 008707 307 ILVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQ 386 (557)
Q Consensus 307 ~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfgla~~ 386 (557)
++||||+++|+|.+++.. ...+++..+..++.||+.||+|||+ .+|+||||||+|||++.++.+||+|||+++.
T Consensus 135 ~lv~e~~~~~~L~~~l~~---~~~~~~~~~~~~~~qi~~aL~~LH~---~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~ 208 (355)
T 1vzo_A 135 HLILDYINGGELFTHLSQ---RERFTEHEVQIYVGEIVLALEHLHK---LGIIYRDIKLENILLDSNGHVVLTDFGLSKE 208 (355)
T ss_dssp EEEECCCCSCBHHHHHHH---HSCCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTSCEEESCSSEEEE
T ss_pred EEEeecCCCCCHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEEECCCCcEEEeeCCCCee
Confidence 999999999999999974 3468999999999999999999998 9999999999999999999999999999987
Q ss_pred cCCCCccccccccCCCCccCCcccCC--CCCCcccceehhHHHHHHHHhCCCCCCCCCccccccHHHHHHHHHhcCCccc
Q 008707 387 AEEDLTHISSVARGTVGYLDPEYYGN--QQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVIS 464 (557)
Q Consensus 387 ~~~~~~~~~~~~~g~~~y~aPE~l~~--~~~s~~~DvwslG~ll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 464 (557)
.............||+.|+|||++.+ ..++.++|||||||++|||++|+.||....... ..............
T Consensus 209 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~--~~~~~~~~~~~~~~--- 283 (355)
T 1vzo_A 209 FVADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKN--SQAEISRRILKSEP--- 283 (355)
T ss_dssp CCGGGGGGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSCC--CHHHHHHHHHHCCC---
T ss_pred cccCCCCcccCcccCcCccChhhhcCCCCCCCchhhHHHHHHHHHHHHHCCCCCccCCccc--hHHHHHHHHhccCC---
Confidence 65443333444569999999999986 357889999999999999999999997443322 22222222221110
Q ss_pred cccccccCCCCHHHHHHHHHHHHHccccCCCCCC-----CHHHHHHH
Q 008707 465 IVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRP-----KMQEIVLA 506 (557)
Q Consensus 465 ~~d~~l~~~~~~~~~~~l~~li~~cl~~~P~~RP-----t~~evl~~ 506 (557)
..+......+.+++.+||..||++|| +++|+++.
T Consensus 284 --------~~~~~~~~~~~~li~~~L~~dP~~R~~~~~~s~~ell~h 322 (355)
T 1vzo_A 284 --------PYPQEMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKEH 322 (355)
T ss_dssp --------CCCTTSCHHHHHHHHHHTCSSGGGSTTSSTTTHHHHHTS
T ss_pred --------CCCcccCHHHHHHHHHHhhhCHHHhcCCCCCCHHHHHcC
Confidence 11112234678999999999999999 99999864
No 169
>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*
Probab=100.00 E-value=4.8e-40 Score=352.11 Aligned_cols=251 Identities=25% Similarity=0.314 Sum_probs=203.4
Q ss_pred HHhhcccCCCCceEEEEEEEc-CCcEEEEEEccCcc---chhHHHHHHHHHHHhhcCCCCccceeeEEEecCeeEEEEEe
Q 008707 237 NNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSC---SHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYEY 312 (557)
Q Consensus 237 ~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~lv~e~ 312 (557)
+++.+.||+|+||.||+|... +|+.||+|++.... ......+.+|+++++.++||||+++++++.+.+..++||||
T Consensus 186 f~~~~~LG~G~fG~Vy~a~~~~tg~~vAvK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lVmEy 265 (576)
T 2acx_A 186 FRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLTL 265 (576)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECC
T ss_pred eEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhHhhhhhHHHHHHHHHHHHHHHcCCCCEeeEEEEEeeCCEEEEEEEc
Confidence 344688999999999999876 68999999986432 22345688999999999999999999999999999999999
Q ss_pred cCCCChhhhhhccCCCCCcCHHHHHHHHHHHHHHHHHHHcCCCCCeEeeccCCCCEEeCCCCcEEEecccCccccCCCCc
Q 008707 313 MHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEEDLT 392 (557)
Q Consensus 313 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfgla~~~~~~~~ 392 (557)
++||+|.+++... ....+++..++.++.||+.||+|||+ ++|+||||||+|||++.++.+||+|||++........
T Consensus 266 ~~gg~L~~~l~~~-~~~~l~e~~~~~i~~qIl~aL~yLH~---~gIvHrDLKPeNILld~~g~vKL~DFGla~~~~~~~~ 341 (576)
T 2acx_A 266 MNGGDLKFHIYHM-GQAGFPEARAVFYAAEICCGLEDLHR---ERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQT 341 (576)
T ss_dssp CCSCBHHHHHHSS-SSCCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTSCEEECCCTTCEECCTTCC
T ss_pred CCCCcHHHHHHhc-CCCCCCHHHHHHHHHHHHHHHHHHHH---CCEeccCCchheEEEeCCCCeEEEecccceecccCcc
Confidence 9999999998753 23458999999999999999999998 9999999999999999999999999999987654322
Q ss_pred cccccccCCCCccCCcccCCCCCCcccceehhHHHHHHHHhCCCCCCCCCccccccHHHHHHHHHhcCCccccccccccC
Q 008707 393 HISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPVLIG 472 (557)
Q Consensus 393 ~~~~~~~g~~~y~aPE~l~~~~~s~~~DvwslG~ll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~ 472 (557)
.....||+.|+|||++.+..++.++|||||||++|||++|+.||........ ... +...+.....
T Consensus 342 --~~~~~GT~~Y~APEvl~~~~~~~~~DiwSLGvilyeLltG~~PF~~~~~~~~--~~~-i~~~i~~~~~---------- 406 (576)
T 2acx_A 342 --IKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIK--REE-VERLVKEVPE---------- 406 (576)
T ss_dssp --EECCCSCGGGCCHHHHTTCEESSHHHHHHHHHHHHHHHHSSCSSSCSSSCCC--HHH-HHHHHHHCCC----------
T ss_pred --ccccCCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCcccccchh--HHH-HHHHhhcccc----------
Confidence 2234699999999999999999999999999999999999999985433211 111 1122222111
Q ss_pred CCCHHHHHHHHHHHHHccccCCCCCC-----CHHHHHHH
Q 008707 473 NVKIESIWRIAEVAIQCVEQRGFSRP-----KMQEIVLA 506 (557)
Q Consensus 473 ~~~~~~~~~l~~li~~cl~~~P~~RP-----t~~evl~~ 506 (557)
.++......+.+++.+||+.||++|| +++||++.
T Consensus 407 ~~p~~~s~~~~dLI~~lL~~dP~~R~g~~~~sa~eil~H 445 (576)
T 2acx_A 407 EYSERFSPQARSLCSQLLCKDPAERLGCRGGSAREVKEH 445 (576)
T ss_dssp CCCTTSCHHHHHHHHHHTCSSGGGSTTCSSSHHHHHHTS
T ss_pred cCCccCCHHHHHHHHHhccCCHHHcCCCCCCCHHHHHhC
Confidence 11111234788999999999999999 78888753
No 170
>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*
Probab=100.00 E-value=4.1e-40 Score=333.91 Aligned_cols=246 Identities=24% Similarity=0.354 Sum_probs=202.1
Q ss_pred HHHhhcccCCCCceEEEEEEEc-CCcEEEEEEccCcc---chhHHHHHHHHHHHhhcCCCCccceeeEEEecCeeEEEEE
Q 008707 236 TNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSC---SHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYE 311 (557)
Q Consensus 236 ~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~lv~e 311 (557)
.|.+.+.||+|+||.||++... +++.||+|++.... ....+.+.+|+.+++.++||||+++++++.+.+..++|||
T Consensus 42 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 121 (335)
T 2owb_A 42 RYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLE 121 (335)
T ss_dssp EEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred ceEEEEEEeeCCCeEEEEEEECCCCCEEEEEEechhhhcCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEEEe
Confidence 3456789999999999999876 47899999986432 2345678899999999999999999999999999999999
Q ss_pred ecCCCChhhhhhccCCCCCcCHHHHHHHHHHHHHHHHHHHcCCCCCeEeeccCCCCEEeCCCCcEEEecccCccccCCCC
Q 008707 312 YMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEEDL 391 (557)
Q Consensus 312 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfgla~~~~~~~ 391 (557)
|+++++|.+++.. ...+++..++.++.||++||+|||+ .+++||||||+||+++.++.+||+|||++.......
T Consensus 122 ~~~~~~L~~~~~~---~~~l~~~~~~~i~~qi~~aL~~LH~---~~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~ 195 (335)
T 2owb_A 122 LCRRRSLLELHKR---RKALTEPEARYYLRQIVLGCQYLHR---NRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDG 195 (335)
T ss_dssp CCTTCBHHHHHHH---HCSCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGGGEEECTTCCEEECCCTTCEECCSTT
T ss_pred cCCCCCHHHHHhc---cCCCCHHHHHHHHHHHHHHHHHHHH---CCCEecCCCchhEEEcCCCCEEEeeccCceecccCc
Confidence 9999999998874 3568999999999999999999998 999999999999999999999999999998764332
Q ss_pred ccccccccCCCCccCCcccCCCCCCcccceehhHHHHHHHHhCCCCCCCCCccccccHHHHHHHHHhcCCcccccccccc
Q 008707 392 THISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPVLI 471 (557)
Q Consensus 392 ~~~~~~~~g~~~y~aPE~l~~~~~s~~~DvwslG~ll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~ 471 (557)
.. .....|++.|+|||.+.+..++.++||||||+++|+|++|+.||....... .... +..+.. .+.
T Consensus 196 ~~-~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~------~~~~-~~~~~~------~~~ 261 (335)
T 2owb_A 196 ER-KKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKE------TYLR-IKKNEY------SIP 261 (335)
T ss_dssp CC-BCCCCSCCSSCCHHHHHTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHHH------HHHH-HHHTCC------CCC
T ss_pred cc-ccccCCCccccCHHHhccCCCCchhhHHHHHHHHHHHHHCcCCCCCCCHHH------HHHH-HhcCCC------CCC
Confidence 22 233458999999999999899999999999999999999999997443211 1111 111111 011
Q ss_pred CCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 008707 472 GNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 505 (557)
Q Consensus 472 ~~~~~~~~~~l~~li~~cl~~~P~~RPt~~evl~ 505 (557)
.. ....+.+++.+||+.||++|||++|+++
T Consensus 262 ~~----~~~~~~~li~~~l~~dp~~Rps~~ell~ 291 (335)
T 2owb_A 262 KH----INPVAASLIQKMLQTDPTARPTINELLN 291 (335)
T ss_dssp TT----SCHHHHHHHHHHTCSSGGGSCCGGGGGG
T ss_pred cc----CCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 11 1236789999999999999999999986
No 171
>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C
Probab=100.00 E-value=2.4e-39 Score=335.93 Aligned_cols=245 Identities=22% Similarity=0.319 Sum_probs=188.6
Q ss_pred cccCCCCceEEEEEEEc-CCcEEEEEEccCccchhHHHHHHHHHHHhhc-CCCCccceeeEEEe----cCeeEEEEEecC
Q 008707 241 KKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCSHRTQQFVTEVALLSRI-HHRNLVPLIGYCEE----EHQRILVYEYMH 314 (557)
Q Consensus 241 ~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~il~~l-~h~nIv~~~~~~~~----~~~~~lv~e~~~ 314 (557)
+.||+|+||.||+|.+. +++.||||++... ..+.+|++++.++ +||||+++++++.. ....++||||++
T Consensus 68 ~~LG~G~~g~V~~~~~~~~~~~vAiK~~~~~-----~~~~~E~~~~~~~~~hp~iv~l~~~~~~~~~~~~~~~lv~E~~~ 142 (400)
T 1nxk_A 68 QVLGLGINGKVLQIFNKRTQEKFALKMLQDC-----PKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLD 142 (400)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEECS-----HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEEEECCC
T ss_pred ceeeeccCeEEEEEEECCCCCEEEEEEeCcc-----hhHHHHHHHHHHhcCCCCcceEeEEEeecccCCcEEEEEEEeCC
Confidence 68999999999999876 5889999998632 4566888887554 89999999999875 567899999999
Q ss_pred CCChhhhhhccCCCCCcCHHHHHHHHHHHHHHHHHHHcCCCCCeEeeccCCCCEEeCC---CCcEEEecccCccccCCCC
Q 008707 315 NGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDI---NMRAKVSDFGLSRQAEEDL 391 (557)
Q Consensus 315 ~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~dlk~~NIll~~---~~~~kl~Dfgla~~~~~~~ 391 (557)
+|+|.+++... ....+++..+..++.||+.||+|||+ .+|+||||||+|||++. ++.+||+|||+++......
T Consensus 143 gg~L~~~l~~~-~~~~l~~~~~~~i~~qi~~aL~~LH~---~~ivHrDlkp~Nill~~~~~~~~~kl~DFG~a~~~~~~~ 218 (400)
T 1nxk_A 143 GGELFSRIQDR-GDQAFTEREASEIMKSIGEAIQYLHS---INIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHN 218 (400)
T ss_dssp SEEHHHHHHCC----CCBHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEESSSSTTCCEEECCCTTCEECC---
T ss_pred CCcHHHHHHHh-CCCCCCHHHHHHHHHHHHHHHHHHHH---CCccccCcCcceEEEecCCCCccEEEEecccccccCCCC
Confidence 99999999753 23468999999999999999999998 99999999999999997 7889999999998764332
Q ss_pred ccccccccCCCCccCCcccCCCCCCcccceehhHHHHHHHHhCCCCCCCCCcccc-ccHHHHHHHHHhcCCccccccccc
Q 008707 392 THISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAE-LNIVHWARSMIKKGDVISIVDPVL 470 (557)
Q Consensus 392 ~~~~~~~~g~~~y~aPE~l~~~~~s~~~DvwslG~ll~elltg~~pf~~~~~~~~-~~~~~~~~~~~~~~~~~~~~d~~l 470 (557)
. .....||+.|+|||++.+..++.++|||||||++|+|++|+.||........ ..... .+..+.... ..+ .
T Consensus 219 ~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~----~i~~~~~~~-~~~-~ 290 (400)
T 1nxk_A 219 S--LTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKT----RIRMGQYEF-PNP-E 290 (400)
T ss_dssp ----------CTTCCGGGSCCCCSSSHHHHHHHHHHHHHHHHSSCSCCCCTTCSSCCSHHH----HHHHTCCCC-CTT-T
T ss_pred c--cccCCCCCCccCHhhcCCCCCCCcccHHHHHHHHHHHHhCCCCCCCCccccccHHHHH----HHHcCcccC-CCc-c
Confidence 2 2234589999999999999999999999999999999999999975443221 11111 122222110 000 0
Q ss_pred cCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 008707 471 IGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLA 506 (557)
Q Consensus 471 ~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~evl~~ 506 (557)
.. .....+.+++.+||+.||++|||+.||++.
T Consensus 291 ~~----~~s~~~~~li~~~L~~dP~~Rpt~~eil~h 322 (400)
T 1nxk_A 291 WS----EVSEEVKMLIRNLLKTEPTQRMTITEFMNH 322 (400)
T ss_dssp TT----TSCHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred cc----cCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 01 123468899999999999999999999974
No 172
>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*
Probab=100.00 E-value=2.1e-40 Score=335.46 Aligned_cols=262 Identities=23% Similarity=0.339 Sum_probs=197.6
Q ss_pred HHHhhcccCCCCceEEEEEEEc-CCcEEEEEEccCccc--hhHHHHHHHHHHHhhcCCCCccceeeEEEecCeeEEEEEe
Q 008707 236 TNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCS--HRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYEY 312 (557)
Q Consensus 236 ~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~lv~e~ 312 (557)
.|++.+.||+|+||.||+|... +|+.||+|++..... ...+.+.+|+++++.++||||+++++++.+.+..++||||
T Consensus 26 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 105 (331)
T 4aaa_A 26 KYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEVCKKKKRWYLVFEF 105 (331)
T ss_dssp GEEEEEEGGGGTTSSEEEEEETTTCCEEEEEEEESCSSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred hheeeeEEeecCCEEEEEEEECCCCceEEEEEEecCCCchHHHHHHHHHHHHHhhCCCCCEeeEEEEeecCCEEEEEEec
Confidence 3556789999999999999876 489999998864432 3345688999999999999999999999999999999999
Q ss_pred cCCCChhhhhhccCCCCCcCHHHHHHHHHHHHHHHHHHHcCCCCCeEeeccCCCCEEeCCCCcEEEecccCccccCCCCc
Q 008707 313 MHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEEDLT 392 (557)
Q Consensus 313 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfgla~~~~~~~~ 392 (557)
+++++|.+++. ....+++..+..++.|++.||+|||+ .+++||||||+||+++.++.+||+|||++........
T Consensus 106 ~~~~~l~~~~~---~~~~~~~~~~~~~~~qi~~~l~~LH~---~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 179 (331)
T 4aaa_A 106 VDHTILDDLEL---FPNGLDYQVVQKYLFQIINGIGFCHS---HNIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGE 179 (331)
T ss_dssp CSEEHHHHHHH---STTCCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTSCEEECCCTTC--------
T ss_pred CCcchHHHHHh---hccCCCHHHHHHHHHHHHHHHHHHHH---CCEEccCcChheEEEcCCCcEEEEeCCCceeecCCcc
Confidence 99999988765 34568999999999999999999998 9999999999999999999999999999987544322
Q ss_pred cccccccCCCCccCCcccCCC-CCCcccceehhHHHHHHHHhCCCCCCCCCccccccHHHHHH----------HHHhcCC
Q 008707 393 HISSVARGTVGYLDPEYYGNQ-QLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWAR----------SMIKKGD 461 (557)
Q Consensus 393 ~~~~~~~g~~~y~aPE~l~~~-~~s~~~DvwslG~ll~elltg~~pf~~~~~~~~~~~~~~~~----------~~~~~~~ 461 (557)
. .....|++.|+|||.+.+. .++.++||||||+++|+|++|+.||........ +..... .......
T Consensus 180 ~-~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~ 256 (331)
T 4aaa_A 180 V-YDDEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQ--LYHIMMCLGNLIPRHQELFNKNP 256 (331)
T ss_dssp -----CCCCCTTCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHH--HHHHHHHHCSCCHHHHHHHHHCG
T ss_pred c-cCCCcCCccccCcccccCCCCcchHHHHHHHHHHHHHHHhCCCCCCCCCcHHH--HHHHHHHhCCCChhhhhHhhhcc
Confidence 2 2234589999999999775 789999999999999999999999985443211 111110 0011111
Q ss_pred c-cccccccccCCCC-----HHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 008707 462 V-ISIVDPVLIGNVK-----IESIWRIAEVAIQCVEQRGFSRPKMQEIVLA 506 (557)
Q Consensus 462 ~-~~~~d~~l~~~~~-----~~~~~~l~~li~~cl~~~P~~RPt~~evl~~ 506 (557)
. .....+.+..... ...+..+.+++.+||+.||++|||++|+++.
T Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~h 307 (331)
T 4aaa_A 257 VFAGVRLPEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELLHH 307 (331)
T ss_dssp GGTTCCCCCCSSCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCGGGGGGS
T ss_pred ccccccCccccccchhhhcccchhHHHHHHHHHHhccCcccCCCHHHHhcC
Confidence 0 0001111111111 1224578899999999999999999999863
No 173
>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*
Probab=100.00 E-value=8.6e-40 Score=345.49 Aligned_cols=260 Identities=22% Similarity=0.278 Sum_probs=193.2
Q ss_pred HHHhhcccCCCCceEEEEEEEc-CCcEEEEEEccCc--cchhHHHHHHHHHHHhhcCCCCccceeeEEEec------Cee
Q 008707 236 TNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADS--CSHRTQQFVTEVALLSRIHHRNLVPLIGYCEEE------HQR 306 (557)
Q Consensus 236 ~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~------~~~ 306 (557)
.|++.+.||+|+||.||+|... +++.||||++... .....+.+.+|+.+++.++||||+++++++... ...
T Consensus 63 ~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~~~ 142 (464)
T 3ttj_A 63 RYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDV 142 (464)
T ss_dssp TEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEESGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTCCEE
T ss_pred CeEEEEEeecCCCeEEEEEEECCCCCEEEEEEECccccChHHHHHHHHHHHHHHhCCCCCCCcEEEEEccCCccccCCeE
Confidence 3556789999999999999865 5889999998754 233456788999999999999999999999654 357
Q ss_pred EEEEEecCCCChhhhhhccCCCCCcCHHHHHHHHHHHHHHHHHHHcCCCCCeEeeccCCCCEEeCCCCcEEEecccCccc
Q 008707 307 ILVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQ 386 (557)
Q Consensus 307 ~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfgla~~ 386 (557)
++||||+++ +|.+.+. ..+++..+..++.||+.||+|||+ .||+||||||+|||++.++.+||+|||+++.
T Consensus 143 ~lv~E~~~~-~l~~~~~-----~~l~~~~~~~~~~qil~aL~~lH~---~~iiHrDlkp~NIll~~~~~~kl~DFG~a~~ 213 (464)
T 3ttj_A 143 YLVMELMDA-NLCQVIQ-----MELDHERMSYLLYQMLCGIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLART 213 (464)
T ss_dssp EEEEECCSE-EHHHHHT-----SCCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTSCEEECCCCCC--
T ss_pred EEEEeCCCC-CHHHHHh-----hcCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCChHhEEEeCCCCEEEEEEEeeee
Confidence 999999965 5666664 238899999999999999999999 9999999999999999999999999999987
Q ss_pred cCCCCccccccccCCCCccCCcccCCCCCCcccceehhHHHHHHHHhCCCCCCCCCccccccHH-H--------------
Q 008707 387 AEEDLTHISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIV-H-------------- 451 (557)
Q Consensus 387 ~~~~~~~~~~~~~g~~~y~aPE~l~~~~~s~~~DvwslG~ll~elltg~~pf~~~~~~~~~~~~-~-------------- 451 (557)
...... .....||+.|+|||++.+..++.++||||+||++|||++|+.||.+.+..+....+ +
T Consensus 214 ~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pF~g~~~~~~~~~i~~~lg~p~~~~~~~~~ 291 (464)
T 3ttj_A 214 AGTSFM--MTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQ 291 (464)
T ss_dssp ---CCC--C----CCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCSCCHHHHTTSC
T ss_pred cCCCcc--cCCCcccccccCHHHHcCCCCCHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHcc
Confidence 654322 23346899999999999999999999999999999999999999865532211100 0
Q ss_pred -HHHHHHhcCCc------cccccccccCCC---CHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 008707 452 -WARSMIKKGDV------ISIVDPVLIGNV---KIESIWRIAEVAIQCVEQRGFSRPKMQEIVLA 506 (557)
Q Consensus 452 -~~~~~~~~~~~------~~~~d~~l~~~~---~~~~~~~l~~li~~cl~~~P~~RPt~~evl~~ 506 (557)
.....+..... ...+...+.... .......+.+++.+||..||++|||++|+++.
T Consensus 292 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~H 356 (464)
T 3ttj_A 292 PTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQH 356 (464)
T ss_dssp HHHHHHHTTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred hhhhhHhhcccccCCCChHHhCcccccccccccccccCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 00011111000 000000000000 11224578999999999999999999999874
No 174
>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=8.4e-40 Score=338.52 Aligned_cols=262 Identities=25% Similarity=0.338 Sum_probs=189.5
Q ss_pred HHHHHhhcccCCCCceEEEEEEEc-CCcEEEEEEccCc--cchhHHHHHHHHHHHhhcC-CCCccceeeEEEecC--eeE
Q 008707 234 EATNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADS--CSHRTQQFVTEVALLSRIH-HRNLVPLIGYCEEEH--QRI 307 (557)
Q Consensus 234 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~il~~l~-h~nIv~~~~~~~~~~--~~~ 307 (557)
...|++.+.||+|+||.||+|.+. +|+.||+|++... .....+.+.+|+.+++.+. ||||+++++++...+ ..+
T Consensus 8 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~l~~~~~~~~~~~~~ 87 (388)
T 3oz6_A 8 LRKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLNVLRADNDRDVY 87 (388)
T ss_dssp HTTEEEEEC-------CEEEEEETTTCCEEEEEEECC--CCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECTTSSCEE
T ss_pred cCceEEEEEeeeCCCeEEEEEEECCCCCEEEEEEecccccChHHHHHHHHHHHHHHhccCCCCCCeeeeEEecCCCCEEE
Confidence 345667899999999999999875 6899999998643 2344567889999999997 999999999997544 689
Q ss_pred EEEEecCCCChhhhhhccCCCCCcCHHHHHHHHHHHHHHHHHHHcCCCCCeEeeccCCCCEEeCCCCcEEEecccCcccc
Q 008707 308 LVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQA 387 (557)
Q Consensus 308 lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfgla~~~ 387 (557)
+||||++ ++|.+++.. ..+++..+..++.||+.||+|||+ .||+||||||+|||++.++.+||+|||+++..
T Consensus 88 lv~e~~~-~~L~~~~~~----~~~~~~~~~~i~~qi~~~L~~LH~---~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~ 159 (388)
T 3oz6_A 88 LVFDYME-TDLHAVIRA----NILEPVHKQYVVYQLIKVIKYLHS---GGLLHRDMKPSNILLNAECHVKVADFGLSRSF 159 (388)
T ss_dssp EEEECCS-EEHHHHHHH----TCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTCCEEECCCTTCEES
T ss_pred EEecccC-cCHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHh---CCEEeCCCCHHHeEEcCCCCEEecCCcccccc
Confidence 9999996 689988873 468899999999999999999999 99999999999999999999999999999865
Q ss_pred CCCC--------------------ccccccccCCCCccCCcccCC-CCCCcccceehhHHHHHHHHhCCCCCCCCCcccc
Q 008707 388 EEDL--------------------THISSVARGTVGYLDPEYYGN-QQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAE 446 (557)
Q Consensus 388 ~~~~--------------------~~~~~~~~g~~~y~aPE~l~~-~~~s~~~DvwslG~ll~elltg~~pf~~~~~~~~ 446 (557)
.... ........||+.|+|||++.+ ..++.++||||+||++|||++|+.||.+.+....
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~ 239 (388)
T 3oz6_A 160 VNIRRVTNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGSSTMNQ 239 (388)
T ss_dssp SSCCCCCCCGGGCCC---------------CCCGGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHH
T ss_pred cccccccccccccccccccccccccccccCCcccCCcCCHHHhcCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCCHHHH
Confidence 3211 111223468999999999976 6789999999999999999999999986543221
Q ss_pred ccHHHHHHHHHhcCCcccc---cc-----------------ccccCCCC-------------HHHHHHHHHHHHHccccC
Q 008707 447 LNIVHWARSMIKKGDVISI---VD-----------------PVLIGNVK-------------IESIWRIAEVAIQCVEQR 493 (557)
Q Consensus 447 ~~~~~~~~~~~~~~~~~~~---~d-----------------~~l~~~~~-------------~~~~~~l~~li~~cl~~~ 493 (557)
. ..+...+..-..... .. ........ ......+.+++.+||+.|
T Consensus 240 ~---~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~~L~~d 316 (388)
T 3oz6_A 240 L---ERIIGVIDFPSNEDVESIQSPFAKTMIESLKEKVEIRQSNKRDIFTKWKNLLLKINPKADCNEEALDLLDKLLQFN 316 (388)
T ss_dssp H---HHHHHHHCCCCHHHHHTSCCSSHHHHHHHHHHHCC-----CCCCHHHHHHHHHHHCTTCCCCHHHHHHHHHHCCSS
T ss_pred H---HHHHHhcCCCCHHHHHhccCHHHHHHHHhCcccccccCCCHHHhCcchhhhcccccccccCCHHHHHHHHHhhccC
Confidence 1 111111110000000 00 00000000 011236889999999999
Q ss_pred CCCCCCHHHHHHH
Q 008707 494 GFSRPKMQEIVLA 506 (557)
Q Consensus 494 P~~RPt~~evl~~ 506 (557)
|++|||++|+++.
T Consensus 317 P~~R~t~~e~l~H 329 (388)
T 3oz6_A 317 PNKRISANDALKH 329 (388)
T ss_dssp GGGSCCHHHHTTS
T ss_pred cccCCCHHHHhCC
Confidence 9999999999875
No 175
>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A
Probab=100.00 E-value=2.6e-39 Score=321.12 Aligned_cols=244 Identities=29% Similarity=0.434 Sum_probs=195.0
Q ss_pred HhhcccCCCCceEEEEEEEc-CCcEEEEEEccCc--cchhHHHHHHHHHHHhhcCCCCccceeeEEEe----cCeeEEEE
Q 008707 238 NFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADS--CSHRTQQFVTEVALLSRIHHRNLVPLIGYCEE----EHQRILVY 310 (557)
Q Consensus 238 ~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~----~~~~~lv~ 310 (557)
++.+.||+|+||.||+|.+. ++..||+|++... .....+.+.+|+.+++.++||||+++++++.. ....++||
T Consensus 29 ~~~~~lg~G~~g~Vy~~~~~~~~~~va~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~lv~ 108 (290)
T 1t4h_A 29 KFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVT 108 (290)
T ss_dssp EEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEEEEEE
T ss_pred EeeeeccCCCCeEEEEeEecCCceEEEEEEecchhhCHHHHHHHHHHHHHHHhCCCCCeeeeeeeeccccCCCceEEEEE
Confidence 45678999999999999875 5788999988643 23455778999999999999999999998865 35689999
Q ss_pred EecCCCChhhhhhccCCCCCcCHHHHHHHHHHHHHHHHHHHcCCCCC--eEeeccCCCCEEeC-CCCcEEEecccCcccc
Q 008707 311 EYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPG--IIHRDVKSSNILLD-INMRAKVSDFGLSRQA 387 (557)
Q Consensus 311 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~--ivH~dlk~~NIll~-~~~~~kl~Dfgla~~~ 387 (557)
||+++++|.+++.. ...+++..++.++.|++.||+|||+ .+ ++||||||+||+++ .++.+||+|||++...
T Consensus 109 e~~~~~~L~~~l~~---~~~~~~~~~~~~~~qi~~~l~~lH~---~~~~i~H~dikp~Nil~~~~~~~~kl~Dfg~~~~~ 182 (290)
T 1t4h_A 109 ELMTSGTLKTYLKR---FKVMKIKVLRSWCRQILKGLQFLHT---RTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLK 182 (290)
T ss_dssp ECCCSCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHT---SSSCCCCSCCCGGGEEESSTTSCEEECCTTGGGGC
T ss_pred EecCCCCHHHHHHH---ccCCCHHHHHHHHHHHHHHHHHHHc---CCCCEEECCCCHHHEEEECCCCCEEEeeCCCcccc
Confidence 99999999999974 3568899999999999999999998 77 99999999999998 7899999999999765
Q ss_pred CCCCccccccccCCCCccCCcccCCCCCCcccceehhHHHHHHHHhCCCCCCCCCccccccHHHHHHHHHhcCCcccccc
Q 008707 388 EEDLTHISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVD 467 (557)
Q Consensus 388 ~~~~~~~~~~~~g~~~y~aPE~l~~~~~s~~~DvwslG~ll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 467 (557)
.... .....|++.|+|||.+.+ .++.++||||||+++|+|++|+.||...... ... ...+..+......+
T Consensus 183 ~~~~---~~~~~~t~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~-----~~~-~~~~~~~~~~~~~~ 252 (290)
T 1t4h_A 183 RASF---AKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSECQNA-----AQI-YRRVTSGVKPASFD 252 (290)
T ss_dssp CTTS---BEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTTCSSH-----HHH-HHHHTTTCCCGGGG
T ss_pred cccc---cccccCCcCcCCHHHHhc-cCCCcchHHHHHHHHHHHHhCCCCCCCcCcH-----HHH-HHHHhccCCccccC
Confidence 4332 223458999999998875 5899999999999999999999999743221 111 11222222111111
Q ss_pred ccccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 008707 468 PVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 505 (557)
Q Consensus 468 ~~l~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~evl~ 505 (557)
. . ....+.+++.+||+.||.+|||++|+++
T Consensus 253 ~----~----~~~~l~~li~~~l~~dp~~Rps~~ell~ 282 (290)
T 1t4h_A 253 K----V----AIPEVKEIIEGCIRQNKDERYSIKDLLN 282 (290)
T ss_dssp G----C----CCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred C----C----CCHHHHHHHHHHccCChhhCCCHHHHhh
Confidence 1 1 1236889999999999999999999985
No 176
>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}
Probab=100.00 E-value=8.5e-41 Score=337.35 Aligned_cols=259 Identities=21% Similarity=0.317 Sum_probs=192.7
Q ss_pred HHhhcccCCCCceEEEEEEEc-CCcEEEEEEccCccch-hHHHHHHHHHHHhhcCCCCccceeeEEEecCeeEEEEEecC
Q 008707 237 NNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCSH-RTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYEYMH 314 (557)
Q Consensus 237 ~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~lv~e~~~ 314 (557)
|++.+.||+|+||.||+|... +++.||+|++...... ....+.+|+++++.++||||+++++++.+.+..++||||++
T Consensus 4 y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~ 83 (324)
T 3mtl_A 4 YIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFEYLD 83 (324)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTCCEEEEEEECC------CCCCCCCHHHHSCCCCTTBCCEEEEEECSSCEEEEEECCS
T ss_pred eEEEEEEcCCCCEEEEEEEECCCCcEEEEEEEecccccccchhHHHHHHHHHhcCCCCCCeeeeEEeeCCEEEEEecccc
Confidence 445789999999999999876 6899999998643222 12245579999999999999999999999999999999996
Q ss_pred CCChhhhhhccCCCCCcCHHHHHHHHHHHHHHHHHHHcCCCCCeEeeccCCCCEEeCCCCcEEEecccCccccCCCCccc
Q 008707 315 NGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEEDLTHI 394 (557)
Q Consensus 315 ~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfgla~~~~~~~~~~ 394 (557)
|+|.+++... ...+++..+..++.|++.||+|||+ .||+||||||+||+++.++.+||+|||++.........
T Consensus 84 -~~l~~~~~~~--~~~~~~~~~~~~~~qi~~aL~~LH~---~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~~~- 156 (324)
T 3mtl_A 84 -KDLKQYLDDC--GNIINMHNVKLFLFQLLRGLAYCHR---QKVLHRDLKPQNLLINERGELKLADFGLARAKSIPTKT- 156 (324)
T ss_dssp -EEHHHHHHHT--TTCCCHHHHHHHHHHHHHHHHHHHH---TTEEESSCCGGGEEECTTCCEEECSSSEEECC-------
T ss_pred -cCHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHH---CCccCCCcCHHHEEECCCCCEEEccCcccccccCCccc-
Confidence 5898888753 4568999999999999999999998 99999999999999999999999999999865433222
Q ss_pred cccccCCCCccCCcccCC-CCCCcccceehhHHHHHHHHhCCCCCCCCCccccccHHHHHHHHHhcCCcc---cccc---
Q 008707 395 SSVARGTVGYLDPEYYGN-QQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVI---SIVD--- 467 (557)
Q Consensus 395 ~~~~~g~~~y~aPE~l~~-~~~s~~~DvwslG~ll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~---~~~d--- 467 (557)
.....||+.|+|||.+.+ ..++.++||||+|+++|+|++|+.||.+.+..+ ....+.......... ....
T Consensus 157 ~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~---~~~~i~~~~~~~~~~~~~~~~~~~~ 233 (324)
T 3mtl_A 157 YDNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTVEE---QLHFIFRILGTPTEETWPGILSNEE 233 (324)
T ss_dssp ------CGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH---HHHHHHHHHCCCCTTTSTTGGGCHH
T ss_pred cccccCcccccChhhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH---HHHHHHHHhCCCChHhchhhhcchh
Confidence 223357999999999876 578999999999999999999999998544322 122222222111100 0000
Q ss_pred ------ccccCC----CCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 008707 468 ------PVLIGN----VKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 505 (557)
Q Consensus 468 ------~~l~~~----~~~~~~~~l~~li~~cl~~~P~~RPt~~evl~ 505 (557)
+..... ........+.+++.+||+.||++|||++|+++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 281 (324)
T 3mtl_A 234 FKTYNYPKYRAEALLSHAPRLDSDGADLLTKLLQFEGRNRISAEDAMK 281 (324)
T ss_dssp HHHTCCCCCCCCCHHHHCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred hcccccccccchhhhhhcCCCCHHHHHHHHHHcCcCcccCCCHHHHhc
Confidence 000000 00112346789999999999999999999987
No 177
>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*
Probab=100.00 E-value=2e-40 Score=335.32 Aligned_cols=259 Identities=19% Similarity=0.253 Sum_probs=190.5
Q ss_pred HHHhhcccCCCCceEEEEEEEc-CCcEEEEEEccCccc--hhHHHHHHHHHHHhhcCCCCccceeeEEEecCeeEEEEEe
Q 008707 236 TNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCS--HRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYEY 312 (557)
Q Consensus 236 ~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~lv~e~ 312 (557)
.|++.+.||+|+||.||+|... +++.||+|++..... ...+.+.+|+++++.++||||+++++++.+.+..++||||
T Consensus 35 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 114 (329)
T 3gbz_A 35 RYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKSVIHHNHRLHLIFEY 114 (329)
T ss_dssp GEEEEEEEEECSSSEEEEEEETTTTEEEEEEECCCCC--------CHHHHHHGGGCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred hEEEEEEEEecCCeEEEEEEECCCCceEEEEEEcccccccccchhHHHHHHHHHHcCCCCcceEEEEEecCCEEEEEEec
Confidence 4566899999999999999865 688999999865432 2245678999999999999999999999999999999999
Q ss_pred cCCCChhhhhhccCCCCCcCHHHHHHHHHHHHHHHHHHHcCCCCCeEeeccCCCCEEeC-----CCCcEEEecccCcccc
Q 008707 313 MHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLD-----INMRAKVSDFGLSRQA 387 (557)
Q Consensus 313 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~dlk~~NIll~-----~~~~~kl~Dfgla~~~ 387 (557)
++ |+|.+++.. ...+++..+..++.||+.||+|||+ .+|+||||||+|||++ .++.+||+|||++...
T Consensus 115 ~~-~~L~~~~~~---~~~~~~~~~~~i~~ql~~~l~~LH~---~~ivH~Dlkp~NIll~~~~~~~~~~~kl~Dfg~a~~~ 187 (329)
T 3gbz_A 115 AE-NDLKKYMDK---NPDVSMRVIKSFLYQLINGVNFCHS---RRCLHRDLKPQNLLLSVSDASETPVLKIGDFGLARAF 187 (329)
T ss_dssp CS-EEHHHHHHH---CTTCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEEEC-----CCEEEECCTTHHHHH
T ss_pred CC-CCHHHHHhh---cCCCCHHHHHHHHHHHHHHHHHHHh---CCEECCCCCHHHEEEecCCCCccceEEECcCCCcccc
Confidence 97 599999874 4568999999999999999999999 9999999999999994 4556999999999876
Q ss_pred CCCCccccccccCCCCccCCcccCCC-CCCcccceehhHHHHHHHHhCCCCCCCCCccccccHHHHHHHHHhcCCccccc
Q 008707 388 EEDLTHISSVARGTVGYLDPEYYGNQ-QLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIV 466 (557)
Q Consensus 388 ~~~~~~~~~~~~g~~~y~aPE~l~~~-~~s~~~DvwslG~ll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 466 (557)
...... .....||+.|+|||++.+. .++.++|||||||++|+|++|+.||......+. +.. ..............
T Consensus 188 ~~~~~~-~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~--~~~-~~~~~~~~~~~~~~ 263 (329)
T 3gbz_A 188 GIPIRQ-FTHEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDSEIDQ--LFK-IFEVLGLPDDTTWP 263 (329)
T ss_dssp C------------CCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH--HHH-HHHHHCCCCTTTST
T ss_pred CCcccc-cCCCcCCccccCHHHhcCCCCCCcHHHHHHHHHHHHHHHHCCCCcCCCCHHHH--HHH-HHHHhCCCchhhhh
Confidence 533222 2233479999999999874 589999999999999999999999975432211 111 11111110000000
Q ss_pred -----------cccccCCC-----CHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 008707 467 -----------DPVLIGNV-----KIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 505 (557)
Q Consensus 467 -----------d~~l~~~~-----~~~~~~~l~~li~~cl~~~P~~RPt~~evl~ 505 (557)
.+...... .......+.+++.+||+.||++|||++|+++
T Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 318 (329)
T 3gbz_A 264 GVTALPDWKQSFPKFRGKTLKRVLGALLDDEGLDLLTAMLEMDPVKRISAKNALE 318 (329)
T ss_dssp TGGGSTTCCTTCCCCCCCCHHHHHGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred hhhhhhhhhhhhhhhccccHhhhcccccCHHHHHHHHHHccCChhhCCCHHHHhC
Confidence 00000000 0012346789999999999999999999985
No 178
>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*
Probab=100.00 E-value=7.3e-40 Score=330.96 Aligned_cols=256 Identities=22% Similarity=0.276 Sum_probs=200.9
Q ss_pred HHHHHHHHhh-cccCCCCceEEEEEEEc-CCcEEEEEEccCcc--chhHHHHHHHHHHHhhc-CCCCccceeeEEEecCe
Q 008707 231 ELEEATNNFC-KKIGKGSFGSVYYGKMK-DGKEVAVKIMADSC--SHRTQQFVTEVALLSRI-HHRNLVPLIGYCEEEHQ 305 (557)
Q Consensus 231 ~~~~~~~~~~-~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~il~~l-~h~nIv~~~~~~~~~~~ 305 (557)
+.....|.+. +.||+|+||.||+|... +++.||+|++.... ......+.+|+.+++.+ .||||+++++++.+.+.
T Consensus 24 ~~~~~~y~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~iv~~~~~~~~~~~ 103 (327)
T 3lm5_A 24 ENFNNFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINLHEVYENTSE 103 (327)
T ss_dssp HHHHHHEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESEETTEECHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSE
T ss_pred HhhhhEEeeccceeCCCCCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHhccCCCCEEEEEEEEEeCCe
Confidence 3344455554 88999999999999876 58999999987543 23356788999999999 57999999999999999
Q ss_pred eEEEEEecCCCChhhhhhccCCCCCcCHHHHHHHHHHHHHHHHHHHcCCCCCeEeeccCCCCEEeCC---CCcEEEeccc
Q 008707 306 RILVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDI---NMRAKVSDFG 382 (557)
Q Consensus 306 ~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~dlk~~NIll~~---~~~~kl~Dfg 382 (557)
.++||||+++|+|.+++... ....+++..++.++.|++.||+|||+ .|++||||||+||+++. ++.+||+|||
T Consensus 104 ~~lv~e~~~~~~L~~~~~~~-~~~~~~~~~~~~i~~ql~~~L~~LH~---~givH~Dikp~NIl~~~~~~~~~~kL~Dfg 179 (327)
T 3lm5_A 104 IILILEYAAGGEIFSLCLPE-LAEMVSENDVIRLIKQILEGVYYLHQ---NNIVHLDLKPQNILLSSIYPLGDIKIVDFG 179 (327)
T ss_dssp EEEEEECCTTEEGGGGGSSC-C-CCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGGGEEESCBTTBCCEEECCGG
T ss_pred EEEEEEecCCCcHHHHHHHh-cccCCCHHHHHHHHHHHHHHHHHHHH---CCeecCcCChHHEEEecCCCCCcEEEeeCc
Confidence 99999999999999998643 34678999999999999999999998 99999999999999987 7899999999
Q ss_pred CccccCCCCccccccccCCCCccCCcccCCCCCCcccceehhHHHHHHHHhCCCCCCCCCccccccHHHHHHHHHhcCCc
Q 008707 383 LSRQAEEDLTHISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDV 462 (557)
Q Consensus 383 la~~~~~~~~~~~~~~~g~~~y~aPE~l~~~~~s~~~DvwslG~ll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 462 (557)
++........ .....||+.|+|||++.+..++.++||||||+++|+|++|+.||...+.... ... +.....
T Consensus 180 ~a~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~------~~~-i~~~~~ 250 (327)
T 3lm5_A 180 MSRKIGHACE--LREIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPFVGEDNQET------YLN-ISQVNV 250 (327)
T ss_dssp GCEEC-----------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH------HHH-HHHTCC
T ss_pred cccccCCccc--cccccCCcCccCCeeecCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchHH------HHH-HHhccc
Confidence 9987654322 2234589999999999999999999999999999999999999975432211 111 111111
Q ss_pred cccccccccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 008707 463 ISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 505 (557)
Q Consensus 463 ~~~~d~~l~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~evl~ 505 (557)
. ............+.+++.+||+.||++|||++|+++
T Consensus 251 ~------~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~~ll~ 287 (327)
T 3lm5_A 251 D------YSEETFSSVSQLATDFIQSLLVKNPEKRPTAEICLS 287 (327)
T ss_dssp C------CCTTTTTTSCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred c------cCchhhcccCHHHHHHHHHHcCCChhhCcCHHHHhC
Confidence 0 001111122346889999999999999999999976
No 179
>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*
Probab=100.00 E-value=9.4e-40 Score=326.37 Aligned_cols=246 Identities=28% Similarity=0.420 Sum_probs=203.0
Q ss_pred HHhhcccCCCCceEEEEEEEc-CCcEEEEEEccCcc-chhHHHHHHHHHHHhhcCCCCccceeeEEEecCeeEEEEEecC
Q 008707 237 NNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSC-SHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYEYMH 314 (557)
Q Consensus 237 ~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~lv~e~~~ 314 (557)
|++.+.||+|+||.||+|... +++.||+|++.... ....+.+.+|+.+++.++||||+++++++.+.+..++||||++
T Consensus 24 y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 103 (303)
T 3a7i_A 24 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLG 103 (303)
T ss_dssp EEEEEEEEECSSSEEEEEEETTTCCEEEEEEEETTTCSTTHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCT
T ss_pred HHHhhhhcccCCeEEEEEEECCCCcEEEEEEecccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEEeCC
Confidence 456789999999999999865 68899999986543 3445789999999999999999999999999999999999999
Q ss_pred CCChhhhhhccCCCCCcCHHHHHHHHHHHHHHHHHHHcCCCCCeEeeccCCCCEEeCCCCcEEEecccCccccCCCCccc
Q 008707 315 NGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEEDLTHI 394 (557)
Q Consensus 315 ~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfgla~~~~~~~~~~ 394 (557)
+++|.+++. ...+++..+..++.|++.||+|||+ .+++||||||+||+++.++.+||+|||++.........
T Consensus 104 ~~~L~~~~~----~~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~~~~- 175 (303)
T 3a7i_A 104 GGSALDLLE----PGPLDETQIATILREILKGLDYLHS---EKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIK- 175 (303)
T ss_dssp TEEHHHHHT----TSCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTSCEEECCCTTCEECBTTBCC-
T ss_pred CCcHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHH---CCCccCCCChheEEECCCCCEEEeecccceecCccccc-
Confidence 999999986 3568999999999999999999998 99999999999999999999999999999876543222
Q ss_pred cccccCCCCccCCcccCCCCCCcccceehhHHHHHHHHhCCCCCCCCCccccccHHHHHHHHHhcCCccccccccccCCC
Q 008707 395 SSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPVLIGNV 474 (557)
Q Consensus 395 ~~~~~g~~~y~aPE~l~~~~~s~~~DvwslG~ll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~ 474 (557)
.....|++.|+|||.+.+..++.++||||||+++|+|++|+.||....... . ...+..+... .+...+
T Consensus 176 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~---~----~~~~~~~~~~-----~~~~~~ 243 (303)
T 3a7i_A 176 RNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMK---V----LFLIPKNNPP-----TLEGNY 243 (303)
T ss_dssp BCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHH---H----HHHHHHSCCC-----CCCSSC
T ss_pred cCccCCCcCccCHHHHhcCCCCchhhhHHHHHHHHHHccCCCCCCCcCHHH---H----HHHhhcCCCC-----CCcccc
Confidence 233458999999999999999999999999999999999999997432211 1 1112222211 111222
Q ss_pred CHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 008707 475 KIESIWRIAEVAIQCVEQRGFSRPKMQEIVLA 506 (557)
Q Consensus 475 ~~~~~~~l~~li~~cl~~~P~~RPt~~evl~~ 506 (557)
+..+.+++.+||+.+|++|||+.||++.
T Consensus 244 ----~~~l~~li~~~l~~dp~~Rps~~~ll~~ 271 (303)
T 3a7i_A 244 ----SKPLKEFVEACLNKEPSFRPTAKELLKH 271 (303)
T ss_dssp ----CHHHHHHHHHHCCSSGGGSCCHHHHTTC
T ss_pred ----CHHHHHHHHHHcCCChhhCcCHHHHhhC
Confidence 2368899999999999999999999874
No 180
>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}
Probab=100.00 E-value=2.4e-39 Score=332.30 Aligned_cols=253 Identities=16% Similarity=0.162 Sum_probs=203.6
Q ss_pred HHHHhhcccCCCCceEEEEEE------EcCCcEEEEEEccCccchhHHHHHHHHHHHhhcC---CCCccceeeEEEecCe
Q 008707 235 ATNNFCKKIGKGSFGSVYYGK------MKDGKEVAVKIMADSCSHRTQQFVTEVALLSRIH---HRNLVPLIGYCEEEHQ 305 (557)
Q Consensus 235 ~~~~~~~~lG~G~~g~Vy~~~------~~~~~~vavK~~~~~~~~~~~~~~~E~~il~~l~---h~nIv~~~~~~~~~~~ 305 (557)
..|.+.+.||+|+||.||+|. ..+++.||+|++.... ...+..|+++++.++ |+||+.+++++...+.
T Consensus 65 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~---~~~~~~e~~~~~~l~~~~~~~iv~~~~~~~~~~~ 141 (365)
T 3e7e_A 65 KLVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPAN---PWEFYIGTQLMERLKPSMQHMFMKFYSAHLFQNG 141 (365)
T ss_dssp SEEEEEEEEEECSSEEEEEEEC-------CCCCEEEEEESSCC---HHHHHHHHHHHHHSCGGGGGGBCCEEEEEECSSC
T ss_pred EEEEEEEEeeccCCEEEEEEEecCCcccccCcEEEEEEeCCCC---hhHHHHHHHHHHHhhhhhhhhhhhhheeeecCCC
Confidence 345567899999999999994 4468899999987543 446777888888886 9999999999999999
Q ss_pred eEEEEEecCCCChhhhhhccC--CCCCcCHHHHHHHHHHHHHHHHHHHcCCCCCeEeeccCCCCEEeCC-----------
Q 008707 306 RILVYEYMHNGTLRDRLHGSV--NQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDI----------- 372 (557)
Q Consensus 306 ~~lv~e~~~~gsL~~~l~~~~--~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~dlk~~NIll~~----------- 372 (557)
.++||||+++|+|.+++.... ....+++..++.++.||+.||+|||+ .+|+||||||+|||++.
T Consensus 142 ~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~lH~---~~ivHrDiKp~NIll~~~~~~~~~~~~~ 218 (365)
T 3e7e_A 142 SVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVHD---CEIIHGDIKPDNFILGNGFLEQDDEDDL 218 (365)
T ss_dssp EEEEECCCCSCBHHHHHHHHHTSTTCSCCHHHHHHHHHHHHHHHHHHHT---TTEECCCCSGGGEEECGGGTCC------
T ss_pred cEEEEeccCCCcHHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHhh---CCeecCCCCHHHEEecccccCccccccc
Confidence 999999999999999997432 35679999999999999999999998 99999999999999998
Q ss_pred CCcEEEecccCccccCCC-CccccccccCCCCccCCcccCCCCCCcccceehhHHHHHHHHhCCCCCCCCCccccccHHH
Q 008707 373 NMRAKVSDFGLSRQAEED-LTHISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVH 451 (557)
Q Consensus 373 ~~~~kl~Dfgla~~~~~~-~~~~~~~~~g~~~y~aPE~l~~~~~s~~~DvwslG~ll~elltg~~pf~~~~~~~~~~~~~ 451 (557)
++.+||+|||+++..... .........||+.|+|||++.+..++.++|||||||++|||+||+.||........
T Consensus 219 ~~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~----- 293 (365)
T 3e7e_A 219 SAGLALIDLGQSIDMKLFPKGTIFTAKCETSGFQCVEMLSNKPWNYQIDYFGVAATVYCMLFGTYMKVKNEGGEC----- 293 (365)
T ss_dssp CTTEEECCCTTCEEGGGSCTTEEECCSSCTTSCCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCCCEEEETTEE-----
T ss_pred cCCEEEeeCchhhhhhccCCCceeeeecCCCCCCChHHhcCCCCCccccHHHHHHHHHHHHhCCCccccCCCCce-----
Confidence 899999999999764321 12223345699999999999999999999999999999999999999963322110
Q ss_pred HHHHHHhcCCccccccccccCCCCHHHHHHHHHHHHHccccCCCCC-CCHHHHHHHHHhhhhhh
Q 008707 452 WARSMIKKGDVISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSR-PKMQEIVLAIQDSIKIE 514 (557)
Q Consensus 452 ~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~~P~~R-Pt~~evl~~L~~~~~~~ 514 (557)
.+...+.... ....+.+++.+|++.+|.+| |+++++.+.|++.....
T Consensus 294 -------------~~~~~~~~~~---~~~~~~~~~~~~l~~~p~~r~~~~~~l~~~l~~~l~~~ 341 (365)
T 3e7e_A 294 -------------KPEGLFRRLP---HLDMWNEFFHVMLNIPDCHHLPSLDLLRQKLKKVFQQH 341 (365)
T ss_dssp -------------EECSCCTTCS---SHHHHHHHHHHHHCCCCTTCCCCHHHHHHHHHHHHHHH
T ss_pred -------------eechhccccC---cHHHHHHHHHHHcCCCCCCcchHHHHHHHHHHHHHHHh
Confidence 0111111111 13467799999999999998 58999999999888754
No 181
>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}
Probab=100.00 E-value=4.6e-39 Score=340.30 Aligned_cols=261 Identities=21% Similarity=0.295 Sum_probs=205.8
Q ss_pred HHhhcccCCCCceEEEEEEE-cCCcEEEEEEccCccchhHHHHHHHHHHHhhcCC-CCccceeeEEEecCeeEEEEEecC
Q 008707 237 NNFCKKIGKGSFGSVYYGKM-KDGKEVAVKIMADSCSHRTQQFVTEVALLSRIHH-RNLVPLIGYCEEEHQRILVYEYMH 314 (557)
Q Consensus 237 ~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~il~~l~h-~nIv~~~~~~~~~~~~~lv~e~~~ 314 (557)
|++.+.||+|+||.||+|.+ .+++.||||++..... .+.+.+|+++++.++| ++|..+..++...+..++||||+
T Consensus 9 y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~--~~~~~~E~~il~~L~~~~~i~~i~~~~~~~~~~~lvme~~- 85 (483)
T 3sv0_A 9 FRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK--HPQLLYESKIYRILQGGTGIPNVRWFGVEGDYNVLVMDLL- 85 (483)
T ss_dssp EECCCCCEECSSCEEEEEEETTTCCEEEEEEEETTCS--SCCHHHHHHHHHHTTTSTTCCCEEEEEEETTEEEEEEECC-
T ss_pred EEEEEEEeeCCCEEEEEEEECCCCcEEEEEEeccccc--cHHHHHHHHHHHHhcCCCCCCeEEEEEeeCCEEEEEEECC-
Confidence 45678999999999999986 4689999998764322 2357889999999976 55666666677788889999999
Q ss_pred CCChhhhhhccCCCCCcCHHHHHHHHHHHHHHHHHHHcCCCCCeEeeccCCCCEEe---CCCCcEEEecccCccccCCCC
Q 008707 315 NGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILL---DINMRAKVSDFGLSRQAEEDL 391 (557)
Q Consensus 315 ~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~dlk~~NIll---~~~~~~kl~Dfgla~~~~~~~ 391 (557)
+++|.+++... ...+++..++.++.||+.||+|||+ ++|+||||||+|||| +.++.+||+|||+++......
T Consensus 86 g~sL~~ll~~~--~~~l~~~~~~~i~~qi~~aL~yLH~---~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~ 160 (483)
T 3sv0_A 86 GPSLEDLFNFC--SRKLSLKTVLMLADQMINRVEFVHS---KSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKYRDTS 160 (483)
T ss_dssp CCBHHHHHHHT--TTCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECCGGGTTCEEECCCTTCEECBCTT
T ss_pred CCCHHHHHHhh--cCCCCHHHHHHHHHHHHHHHHHHHH---CCEeecccCcceEEEecCCCCCeEEEEeCCcceeccCCc
Confidence 99999999743 4569999999999999999999998 999999999999999 588999999999998765433
Q ss_pred cc------ccccccCCCCccCCcccCCCCCCcccceehhHHHHHHHHhCCCCCCCCCccccccHHHHHHHHHhcCCcccc
Q 008707 392 TH------ISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISI 465 (557)
Q Consensus 392 ~~------~~~~~~g~~~y~aPE~l~~~~~s~~~DvwslG~ll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 465 (557)
.. ......||+.|+|||.+.+..++.++|||||||++|||++|+.||..............+...........+
T Consensus 161 ~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l 240 (483)
T 3sv0_A 161 THQHIPYRENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVATSIEAL 240 (483)
T ss_dssp TCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSHHHHHHHHHHHHHHSCHHHH
T ss_pred cccccccccccccCCCccccCHHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccchhHHHHHHHHhhccccccHHHH
Confidence 21 122456899999999999999999999999999999999999999865443322222222211111111111
Q ss_pred ccccccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhhhhh
Q 008707 466 VDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKIE 514 (557)
Q Consensus 466 ~d~~l~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~evl~~L~~~~~~~ 514 (557)
...+ +.++.+++.+||+.+|++||++++|+++|+++....
T Consensus 241 -----~~~~----p~~l~~li~~cl~~dP~~RPs~~el~~~L~~l~~~~ 280 (483)
T 3sv0_A 241 -----CRGY----PTEFASYFHYCRSLRFDDKPDYSYLKRLFRDLFIRE 280 (483)
T ss_dssp -----HTTS----CHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHHT
T ss_pred -----hcCC----cHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHHc
Confidence 1111 347889999999999999999999999999987644
No 182
>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*
Probab=100.00 E-value=7.1e-40 Score=324.14 Aligned_cols=245 Identities=21% Similarity=0.291 Sum_probs=198.1
Q ss_pred HHHHHhhcccCCCCceEEEEEEEc-CCcEEEEEEccCc--cchhHHHHHHHHHHHhhc-CCCCccceeeEEEecCeeEEE
Q 008707 234 EATNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADS--CSHRTQQFVTEVALLSRI-HHRNLVPLIGYCEEEHQRILV 309 (557)
Q Consensus 234 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~il~~l-~h~nIv~~~~~~~~~~~~~lv 309 (557)
...|++.+.||+|+||.||+|... +++.||+|++... .......+.+|+..+..+ +||||+++++++.+.+..++|
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~~h~~iv~~~~~~~~~~~~~lv 89 (289)
T 1x8b_A 10 TTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYFSAWAEDDHMLIQ 89 (289)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCCTTSHHHHHHHHHHHHHHHSCSCTTBCCEEEEEEETTEEEEE
T ss_pred cchhhhhhhhcCCCceEEEEEEEcCCCceEEEEEecccccccHHHHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEE
Confidence 355667899999999999999886 6899999998753 233456788999999999 899999999999999999999
Q ss_pred EEecCCCChhhhhhccC-CCCCcCHHHHHHHHHHHHHHHHHHHcCCCCCeEeeccCCCCEEeCCC---------------
Q 008707 310 YEYMHNGTLRDRLHGSV-NQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDIN--------------- 373 (557)
Q Consensus 310 ~e~~~~gsL~~~l~~~~-~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~dlk~~NIll~~~--------------- 373 (557)
|||+++++|.+++.... ....+++..++.++.||+.||+|||+ ++++||||||+||+++.+
T Consensus 90 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~---~~ivH~Dikp~NIl~~~~~~~~~~~~~~~~~~~ 166 (289)
T 1x8b_A 90 NEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHS---MSLVHMDIKPSNIFISRTSIPNAASEEGDEDDW 166 (289)
T ss_dssp EECCTTCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEEC-----------------
T ss_pred EEecCCCcHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHHh---CCEeecCCCHHHEEEcCCCCCcccccccccccc
Confidence 99999999999997532 12568999999999999999999998 999999999999999844
Q ss_pred ----CcEEEecccCccccCCCCccccccccCCCCccCCcccCCC-CCCcccceehhHHHHHHHHhCCCCCCCCCcccccc
Q 008707 374 ----MRAKVSDFGLSRQAEEDLTHISSVARGTVGYLDPEYYGNQ-QLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELN 448 (557)
Q Consensus 374 ----~~~kl~Dfgla~~~~~~~~~~~~~~~g~~~y~aPE~l~~~-~~s~~~DvwslG~ll~elltg~~pf~~~~~~~~~~ 448 (557)
..+||+|||.+....... ...||+.|+|||.+.+. .++.++||||||+++|+|++|..|+...+
T Consensus 167 ~~~~~~~kl~Dfg~~~~~~~~~-----~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~------ 235 (289)
T 1x8b_A 167 ASNKVMFKIGDLGHVTRISSPQ-----VEEGDSRFLANEVLQENYTHLPKADIFALALTVVCAAGAEPLPRNGD------ 235 (289)
T ss_dssp ---CCCEEECCCTTCEETTCSC-----CCCCCGGGCCHHHHTTCCTTHHHHHHHHHHHHHHHHTTCCCCCSSSH------
T ss_pred cCCceEEEEcccccccccCCcc-----ccCCCccccChhHhcCCCCCCchhhHHHHHHHHHHHhcCCCCCcchh------
Confidence 479999999998765432 23489999999999776 66789999999999999999998775221
Q ss_pred HHHHHHHHHhcCCccccccccccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 008707 449 IVHWARSMIKKGDVISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 505 (557)
Q Consensus 449 ~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~evl~ 505 (557)
. ...+..+..... ... .+..+.+++.+||+.||++|||+.|+++
T Consensus 236 ~----~~~~~~~~~~~~-----~~~----~~~~~~~li~~~l~~dp~~Rps~~~ll~ 279 (289)
T 1x8b_A 236 Q----WHEIRQGRLPRI-----PQV----LSQEFTELLKVMIHPDPERRPSAMALVK 279 (289)
T ss_dssp H----HHHHHTTCCCCC-----SSC----CCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred H----HHHHHcCCCCCC-----Ccc----cCHHHHHHHHHHhCCCcccCCCHHHHhh
Confidence 1 111222222111 111 2346889999999999999999999975
No 183
>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*
Probab=100.00 E-value=9.8e-40 Score=324.03 Aligned_cols=259 Identities=27% Similarity=0.402 Sum_probs=196.9
Q ss_pred HHHHhhcccCCCCceEEEEEEEc--CCc--EEEEEEccCc---cchhHHHHHHHHHHHhhcCCCCccceeeEEEecCeeE
Q 008707 235 ATNNFCKKIGKGSFGSVYYGKMK--DGK--EVAVKIMADS---CSHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRI 307 (557)
Q Consensus 235 ~~~~~~~~lG~G~~g~Vy~~~~~--~~~--~vavK~~~~~---~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~ 307 (557)
..|++.+.||+|+||.||+|.+. +++ .||+|++... .....+.+.+|+++++.++||||+++++++.... .+
T Consensus 18 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-~~ 96 (291)
T 1u46_A 18 KDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPP-MK 96 (291)
T ss_dssp GGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS-CE
T ss_pred hHeeeeeeecCCCceeEEEEEeccCCCceeEEEEEEEccCccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEccCC-ce
Confidence 34567899999999999999864 233 6899988653 2344577899999999999999999999998765 88
Q ss_pred EEEEecCCCChhhhhhccCCCCCcCHHHHHHHHHHHHHHHHHHHcCCCCCeEeeccCCCCEEeCCCCcEEEecccCcccc
Q 008707 308 LVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQA 387 (557)
Q Consensus 308 lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfgla~~~ 387 (557)
+||||+++++|.+++... ...+++..+..++.|+++||+|||+ .+++|+||||+||+++.++.+||+|||++...
T Consensus 97 ~v~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~ 171 (291)
T 1u46_A 97 MVTELAPLGSLLDRLRKH--QGHFLLGTLSRYAVQVAEGMGYLES---KRFIHRDLAARNLLLATRDLVKIGDFGLMRAL 171 (291)
T ss_dssp EEEECCTTCBHHHHHHHH--GGGSCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGGGEEEEETTEEEECCCTTCEEC
T ss_pred eeEecccCCCHHHHHHhc--cCCcCHHHHHHHHHHHHHHHHHHHh---CCcccCCCchheEEEcCCCCEEEccccccccc
Confidence 999999999999998753 3568899999999999999999998 99999999999999999999999999999876
Q ss_pred CCCCcc--ccccccCCCCccCCcccCCCCCCcccceehhHHHHHHHHh-CCCCCCCCCccccccHHHHHHHHHhcCCccc
Q 008707 388 EEDLTH--ISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELIS-GKKPVSVEDFGAELNIVHWARSMIKKGDVIS 464 (557)
Q Consensus 388 ~~~~~~--~~~~~~g~~~y~aPE~l~~~~~s~~~DvwslG~ll~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 464 (557)
...... ......+++.|+|||.+.+..++.++||||||+++|+|++ |+.||...+.. +........+....
T Consensus 172 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~------~~~~~~~~~~~~~~ 245 (291)
T 1u46_A 172 PQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGS------QILHKIDKEGERLP 245 (291)
T ss_dssp CC-CCEEEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTCCHH------HHHHHHHTSCCCCC
T ss_pred cccccchhhhccCCCCceeeCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCcccCCHH------HHHHHHHccCCCCC
Confidence 543321 1223347788999999988889999999999999999999 99999744321 11222222111111
Q ss_pred cccccccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhhhhh
Q 008707 465 IVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKIE 514 (557)
Q Consensus 465 ~~d~~l~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~evl~~L~~~~~~~ 514 (557)
.....+..+.+++.+||+.+|++|||+.++++.|+++....
T Consensus 246 ---------~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~~ 286 (291)
T 1u46_A 246 ---------RPEDCPQDIYNVMVQCWAHKPEDRPTFVALRDFLLEAQPTD 286 (291)
T ss_dssp ---------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC---
T ss_pred ---------CCcCcCHHHHHHHHHHccCCcccCcCHHHHHHHHHHhCccc
Confidence 11122347889999999999999999999999999887643
No 184
>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*
Probab=100.00 E-value=3.1e-40 Score=325.65 Aligned_cols=251 Identities=26% Similarity=0.385 Sum_probs=200.2
Q ss_pred HHhhcccCCCCceEEEEEEEc-CCcEEEEEEccCcc--chhHHHHHHHHHHHhhcCCCCccceeeEEEe--cCeeEEEEE
Q 008707 237 NNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSC--SHRTQQFVTEVALLSRIHHRNLVPLIGYCEE--EHQRILVYE 311 (557)
Q Consensus 237 ~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~--~~~~~lv~e 311 (557)
|++.+.||+|+||.||+|... +++.||+|++.... ....+.+.+|++++++++||||+++++++.+ ....++|||
T Consensus 8 y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~e 87 (279)
T 2w5a_A 8 YEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVME 87 (279)
T ss_dssp EEEEEEEEECSSSEEEEEEETTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEEGGGTEEEEEEE
T ss_pred eeeehhccCCCCcEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhcCCCCCCeEEEEEecCCCceEEEEEe
Confidence 456789999999999999876 68999999986532 3445678999999999999999999998754 568899999
Q ss_pred ecCCCChhhhhhccC-CCCCcCHHHHHHHHHHHHHHHHHHHcCCCCC-----eEeeccCCCCEEeCCCCcEEEecccCcc
Q 008707 312 YMHNGTLRDRLHGSV-NQKPLDWLTRLQIAHDAAKGLEYLHTGCNPG-----IIHRDVKSSNILLDINMRAKVSDFGLSR 385 (557)
Q Consensus 312 ~~~~gsL~~~l~~~~-~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~-----ivH~dlk~~NIll~~~~~~kl~Dfgla~ 385 (557)
|+++++|.+++.... ....+++..++.++.|++.||+|||+ .+ ++||||||+||+++.++.+||+|||++.
T Consensus 88 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~---~~~~~~~ivH~dl~p~NIl~~~~~~~kl~dfg~~~ 164 (279)
T 2w5a_A 88 YCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHR---RSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLAR 164 (279)
T ss_dssp CCTTEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHH---HC------CCCCCSGGGEEECSSSCEEECCCCHHH
T ss_pred CCCCCCHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHhc---ccCCCCeeEEeccchhhEEEcCCCCEEEecCchhe
Confidence 999999999987532 34458999999999999999999998 77 9999999999999999999999999998
Q ss_pred ccCCCCccccccccCCCCccCCcccCCCCCCcccceehhHHHHHHHHhCCCCCCCCCccccccHHHHHHHHHhcCCcccc
Q 008707 386 QAEEDLTHISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISI 465 (557)
Q Consensus 386 ~~~~~~~~~~~~~~g~~~y~aPE~l~~~~~s~~~DvwslG~ll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 465 (557)
........ .....|++.|+|||.+.+..++.++||||||+++|+|++|+.||...+.. + ....+..+.....
T Consensus 165 ~~~~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~------~-~~~~i~~~~~~~~ 236 (279)
T 2w5a_A 165 ILNHDTSF-AKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQK------E-LAGKIREGKFRRI 236 (279)
T ss_dssp HC---CHH-HHHHHSCCTTCCHHHHHCC-CCHHHHHHHHHHHHHHHHHSSCSSCCSSHH------H-HHHHHHHTCCCCC
T ss_pred eecccccc-ccccCCCccccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCcccCHH------H-HHHHHhhcccccC
Confidence 76543221 22335899999999999989999999999999999999999999744321 1 1222333332211
Q ss_pred ccccccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHH
Q 008707 466 VDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAI 507 (557)
Q Consensus 466 ~d~~l~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~evl~~L 507 (557)
+...+..+.+++.+||+.+|++|||++||++.+
T Consensus 237 ---------~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~~ 269 (279)
T 2w5a_A 237 ---------PYRYSDELNEIITRMLNLKDYHRPSVEEILENP 269 (279)
T ss_dssp ---------CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTST
T ss_pred ---------CcccCHHHHHHHHHHcCCCcccCCCHHHHHhCh
Confidence 112234788999999999999999999998754
No 185
>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A
Probab=100.00 E-value=8.8e-40 Score=341.48 Aligned_cols=253 Identities=25% Similarity=0.353 Sum_probs=191.5
Q ss_pred HHHHHHHhhcccCCCCceEEEEEEEc-CCcEEEEEEccCccc--------hhHHHHHHHHHHHhhcCCCCccceeeEEEe
Q 008707 232 LEEATNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCS--------HRTQQFVTEVALLSRIHHRNLVPLIGYCEE 302 (557)
Q Consensus 232 ~~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--------~~~~~~~~E~~il~~l~h~nIv~~~~~~~~ 302 (557)
.....|.+.+.||+|+||.||+|... +++.||+|++..... .....+.+|++++++++||||+++++++..
T Consensus 132 ~~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~ 211 (419)
T 3i6u_A 132 ALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDA 211 (419)
T ss_dssp HHHTTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHCCCTTBCCCCEEEES
T ss_pred hhhccEEEEeEEeeCCCeEEEEEEECCCCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhCCCCCEeeEEEEEec
Confidence 33456677899999999999999875 579999999864311 112347899999999999999999999864
Q ss_pred cCeeEEEEEecCCCChhhhhhccCCCCCcCHHHHHHHHHHHHHHHHHHHcCCCCCeEeeccCCCCEEeCCCC---cEEEe
Q 008707 303 EHQRILVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINM---RAKVS 379 (557)
Q Consensus 303 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~dlk~~NIll~~~~---~~kl~ 379 (557)
+..++||||+++|+|.+++.. ...+++..+..++.|++.||+|||+ .+|+||||||+|||++.++ .+||+
T Consensus 212 -~~~~lv~e~~~~g~L~~~l~~---~~~~~~~~~~~i~~qi~~~l~~LH~---~~ivHrDlkp~NIll~~~~~~~~~kl~ 284 (419)
T 3i6u_A 212 -EDYYIVLELMEGGELFDKVVG---NKRLKEATCKLYFYQMLLAVQYLHE---NGIIHRDLKPENVLLSSQEEDCLIKIT 284 (419)
T ss_dssp -SEEEEEEECCTTCBGGGGTSS---SCCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEESSSSSSCCEEEC
T ss_pred -CceEEEEEcCCCCcHHHHHhc---cCCCCHHHHHHHHHHHHHHHHHHHH---CCccccCCChHhEEEecCCCcceEEEe
Confidence 457999999999999998873 4678999999999999999999998 9999999999999997544 59999
Q ss_pred cccCccccCCCCccccccccCCCCccCCcccCC---CCCCcccceehhHHHHHHHHhCCCCCCCCCccccccHHHHHHHH
Q 008707 380 DFGLSRQAEEDLTHISSVARGTVGYLDPEYYGN---QQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSM 456 (557)
Q Consensus 380 Dfgla~~~~~~~~~~~~~~~g~~~y~aPE~l~~---~~~s~~~DvwslG~ll~elltg~~pf~~~~~~~~~~~~~~~~~~ 456 (557)
|||+++...... ......||+.|+|||++.+ ..++.++||||||+++|+|++|+.||...... ..+.. .
T Consensus 285 DFG~a~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~--~~~~~----~ 356 (419)
T 3i6u_A 285 DFGHSKILGETS--LMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQ--VSLKD----Q 356 (419)
T ss_dssp CSSTTTSCC-------------CTTCCTTTTC----CTTHHHHHHHHHHHHHHHHHHSSCSSCCCSSS--CCHHH----H
T ss_pred ecccceecCCCc--cccccCCCCCccCceeeecCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCcch--HHHHH----H
Confidence 999998765432 2234568999999999853 57788999999999999999999999743322 12221 2
Q ss_pred HhcCCccccccccccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 008707 457 IKKGDVISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 505 (557)
Q Consensus 457 ~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~evl~ 505 (557)
+..+..... +..... ....+.+++.+||+.||++|||++|+++
T Consensus 357 i~~~~~~~~--~~~~~~----~~~~~~~li~~~L~~dP~~Rps~~e~l~ 399 (419)
T 3i6u_A 357 ITSGKYNFI--PEVWAE----VSEKALDLVKKLLVVDPKARFTTEEALR 399 (419)
T ss_dssp HHTTCCCCC--HHHHTT----SCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred HhcCCCCCC--chhhcc----cCHHHHHHHHHHccCChhHCcCHHHHhC
Confidence 222221110 000111 2346889999999999999999999986
No 186
>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*
Probab=100.00 E-value=1.2e-39 Score=332.57 Aligned_cols=261 Identities=19% Similarity=0.252 Sum_probs=196.7
Q ss_pred HHHhhcccCCCCceEEEEEEEc-CCcEEEEEEccCccc--hhHHHHHHHHHHHhhcCCCCccceeeEEEe--------cC
Q 008707 236 TNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCS--HRTQQFVTEVALLSRIHHRNLVPLIGYCEE--------EH 304 (557)
Q Consensus 236 ~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~il~~l~h~nIv~~~~~~~~--------~~ 304 (557)
.|++.+.||+|+||.||+|... +|+.||+|++..... .....+.+|+++++.++||||+++++++.. .+
T Consensus 18 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~ 97 (351)
T 3mi9_A 18 KYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRCKG 97 (351)
T ss_dssp GEEEEEECSSCSTTSEEEEEETTTCCEEEEEECCCSSCSSSSCHHHHHHHHHHHHCCCTTBCCEEEEEEEC--------C
T ss_pred ceeEEEEEecCCCcEEEEEEECCCCCEEEEEEEecccccccchHHHHHHHHHHHhccCCCcccHhheeeccccccccCCc
Confidence 4566799999999999999874 689999998854322 234578899999999999999999999877 44
Q ss_pred eeEEEEEecCCCChhhhhhccCCCCCcCHHHHHHHHHHHHHHHHHHHcCCCCCeEeeccCCCCEEeCCCCcEEEecccCc
Q 008707 305 QRILVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLS 384 (557)
Q Consensus 305 ~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfgla 384 (557)
..++||||+++ +|.+.+... ...+++..+..++.||+.||+|||+ .||+||||||+|||++.++.+||+|||++
T Consensus 98 ~~~lv~e~~~~-~l~~~l~~~--~~~~~~~~~~~i~~qi~~~l~~LH~---~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a 171 (351)
T 3mi9_A 98 SIYLVFDFCEH-DLAGLLSNV--LVKFTLSEIKRVMQMLLNGLYYIHR---NKILHRDMKAANVLITRDGVLKLADFGLA 171 (351)
T ss_dssp EEEEEEECCSE-EHHHHHHCT--TSCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTSCEEECCCTTC
T ss_pred eEEEEEeccCC-CHHHHHhhc--cCCCCHHHHHHHHHHHHHHHHHHHH---CCeeCCCCCHHHEEEcCCCCEEEccchhc
Confidence 68999999974 777777643 3568999999999999999999998 99999999999999999999999999999
Q ss_pred cccCCCC---ccccccccCCCCccCCcccCC-CCCCcccceehhHHHHHHHHhCCCCCCCCCccccccHHHHHHHHHhcC
Q 008707 385 RQAEEDL---THISSVARGTVGYLDPEYYGN-QQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKG 460 (557)
Q Consensus 385 ~~~~~~~---~~~~~~~~g~~~y~aPE~l~~-~~~s~~~DvwslG~ll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~ 460 (557)
....... ........||+.|+|||++.+ ..++.++|||||||++|+|++|+.||........ ...+......-
T Consensus 172 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~---~~~i~~~~~~~ 248 (351)
T 3mi9_A 172 RAFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQ---LALISQLCGSI 248 (351)
T ss_dssp EECCCCSSSSCCCCCSSCSCGGGCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHH---HHHHHHHHCCC
T ss_pred ccccccccccccccCCcccccCccCchhhcCCCCCCcHhHHHHHHHHHHHHHhCCCCCCCCChHHH---HHHHHHHhCCC
Confidence 8764322 112233458999999999876 4679999999999999999999999985443221 11112211111
Q ss_pred Cccc---c-----ccc---cccCCCCH-H------HHHHHHHHHHHccccCCCCCCCHHHHHH
Q 008707 461 DVIS---I-----VDP---VLIGNVKI-E------SIWRIAEVAIQCVEQRGFSRPKMQEIVL 505 (557)
Q Consensus 461 ~~~~---~-----~d~---~l~~~~~~-~------~~~~l~~li~~cl~~~P~~RPt~~evl~ 505 (557)
.... . .+. ........ . ....+.+++.+||+.||++|||++|+++
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 311 (351)
T 3mi9_A 249 TPEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALN 311 (351)
T ss_dssp CTTTSTTGGGCGGGTSSCCCSSCCCCHHHHHHHHHCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred ChhhccccccchhhcccccccccccCHHHHhhhccCChHHHHHHHHHhcCChhhCCCHHHHhC
Confidence 0000 0 000 00000011 1 1235789999999999999999999986
No 187
>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*
Probab=100.00 E-value=9.1e-40 Score=321.79 Aligned_cols=246 Identities=24% Similarity=0.381 Sum_probs=193.5
Q ss_pred HHHhhcccCCCCceEEEEEEEc-CCcEEEEEEccCcc---chhHHHHHHHHHHHhhcCCCCccceeeEEEecCeeEEEEE
Q 008707 236 TNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSC---SHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYE 311 (557)
Q Consensus 236 ~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~lv~e 311 (557)
.|.+.+.||+|+||.||+|.+. +|+.||+|++.... ....+.+.+|+++++.++||||+++++++.+.+..++|||
T Consensus 12 ~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 91 (276)
T 2h6d_A 12 HYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMVME 91 (276)
T ss_dssp TEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred cEEEEeeecCCCCeEEEEEEECCCCceEEEEEeccccccchhHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCeEEEEEe
Confidence 3456789999999999999886 68999999986432 1234578899999999999999999999999999999999
Q ss_pred ecCCCChhhhhhccCCCCCcCHHHHHHHHHHHHHHHHHHHcCCCCCeEeeccCCCCEEeCCCCcEEEecccCccccCCCC
Q 008707 312 YMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEEDL 391 (557)
Q Consensus 312 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfgla~~~~~~~ 391 (557)
|+++++|.+++.. ...+++..+..++.|++.||+|||+ .+++|+||||+||+++.++.++|+|||++.......
T Consensus 92 ~~~~~~L~~~l~~---~~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~ 165 (276)
T 2h6d_A 92 YVSGGELFDYICK---HGRVEEMEARRLFQQILSAVDYCHR---HMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGE 165 (276)
T ss_dssp CCCSCBHHHHHHH---HCSCCHHHHHHHHHHHHHHHHHHHH---HCSSCCCCCGGGEEECTTSCEEECCCCGGGCCCC--
T ss_pred ccCCCcHHHHHhc---cCCCCHHHHHHHHHHHHHHHHHHHH---CCCccCCCChhhEEECCCCCEEEeecccccccCCCc
Confidence 9999999999974 3468999999999999999999998 999999999999999999999999999998765432
Q ss_pred ccccccccCCCCccCCcccCCCCC-CcccceehhHHHHHHHHhCCCCCCCCCccccccHHHHHHHHHhcCCccccccccc
Q 008707 392 THISSVARGTVGYLDPEYYGNQQL-TEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPVL 470 (557)
Q Consensus 392 ~~~~~~~~g~~~y~aPE~l~~~~~-s~~~DvwslG~ll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l 470 (557)
. .....+++.|+|||.+.+..+ +.++||||||+++|+|++|+.||...... . ....+..+... +
T Consensus 166 ~--~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~------~-~~~~~~~~~~~------~ 230 (276)
T 2h6d_A 166 F--LRTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHVP------T-LFKKIRGGVFY------I 230 (276)
T ss_dssp -------------CCTGGGTTSCCCHHHHHHHHHHHHHHHHHHSSCSSCCSSHH------H-HHHHHHHCCCC------C
T ss_pred c--eecccCCccccCHHHHcCCCCCCccchHHHHHHHHHHHHhCCCCCCCCcHH------H-HHHHhhcCccc------C
Confidence 2 223358999999999988765 68999999999999999999999743321 1 11122222110 0
Q ss_pred cCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 008707 471 IGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLA 506 (557)
Q Consensus 471 ~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~evl~~ 506 (557)
+......+.+++.+||+.||++|||+.|+++.
T Consensus 231 ----~~~~~~~l~~li~~~l~~~p~~Rps~~~~l~h 262 (276)
T 2h6d_A 231 ----PEYLNRSVATLLMHMLQVDPLKRATIKDIREH 262 (276)
T ss_dssp ----CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHS
T ss_pred ----chhcCHHHHHHHHHHccCChhhCCCHHHHHhC
Confidence 11122368899999999999999999999873
No 188
>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*
Probab=100.00 E-value=1.2e-39 Score=347.88 Aligned_cols=255 Identities=27% Similarity=0.396 Sum_probs=200.7
Q ss_pred HHHHHhhcccCCCCceEEEEEEEc-CCcEEEEEEccCcc--chhHHHHHHHHHHHhhcCCCCccceeeEEEecCeeEEEE
Q 008707 234 EATNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSC--SHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVY 310 (557)
Q Consensus 234 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~lv~ 310 (557)
...|++.+.||+|+||.||+|... ++..||+|++.... ......+.+|+++++.++||||+++++++.+.+..++||
T Consensus 36 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~ 115 (494)
T 3lij_A 36 SEMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDFFEDKRNYYLVM 115 (494)
T ss_dssp HHHEEEEEEEECC---EEEEEEETTTCCEEEEEEEEC-----CTTHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hcCeEEeeEEecCCCEEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEE
Confidence 456778999999999999999876 68899999987542 233567889999999999999999999999999999999
Q ss_pred EecCCCChhhhhhccCCCCCcCHHHHHHHHHHHHHHHHHHHcCCCCCeEeeccCCCCEEeCCC---CcEEEecccCcccc
Q 008707 311 EYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDIN---MRAKVSDFGLSRQA 387 (557)
Q Consensus 311 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~dlk~~NIll~~~---~~~kl~Dfgla~~~ 387 (557)
||+++|+|.+.+.. ...+++..+..++.||+.||+|||+ .+|+||||||+|||++.. +.+||+|||++...
T Consensus 116 e~~~~g~L~~~~~~---~~~~~~~~~~~i~~qi~~~l~~lH~---~~ivH~Dlkp~Nil~~~~~~~~~~kl~DfG~a~~~ 189 (494)
T 3lij_A 116 ECYKGGELFDEIIH---RMKFNEVDAAVIIKQVLSGVTYLHK---HNIVHRDLKPENLLLESKEKDALIKIVDFGLSAVF 189 (494)
T ss_dssp ECCCSCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEESCSSTTCCEEECCCTTCEEC
T ss_pred ecCCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHH---CCceeccCChhhEEEeCCCCCCcEEEEECCCCeEC
Confidence 99999999998874 3568999999999999999999998 999999999999999764 45999999999876
Q ss_pred CCCCccccccccCCCCccCCcccCCCCCCcccceehhHHHHHHHHhCCCCCCCCCccccccHHHHHHHHHhcCCcccccc
Q 008707 388 EEDLTHISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVD 467 (557)
Q Consensus 388 ~~~~~~~~~~~~g~~~y~aPE~l~~~~~s~~~DvwslG~ll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 467 (557)
..... .....||+.|+|||++.+ .++.++||||+||++|+|++|..||....... +...+..+.... +
T Consensus 190 ~~~~~--~~~~~gt~~y~aPE~l~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~-------~~~~i~~~~~~~--~ 257 (494)
T 3lij_A 190 ENQKK--MKERLGTAYYIAPEVLRK-KYDEKCDVWSIGVILFILLAGYPPFGGQTDQE-------ILRKVEKGKYTF--D 257 (494)
T ss_dssp BTTBC--BCCCCSCTTTCCHHHHTT-CBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH-------HHHHHHHTCCCC--C
T ss_pred CCCcc--ccccCCCcCeeCHHHHcc-cCCCchhHHHHHHHHHHHHhCCCCCCCCCHHH-------HHHHHHhCCCCC--C
Confidence 54322 233458999999999874 68999999999999999999999997543221 112222222211 1
Q ss_pred ccccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHH--HHhh
Q 008707 468 PVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLA--IQDS 510 (557)
Q Consensus 468 ~~l~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~evl~~--L~~~ 510 (557)
...... .+..+.+++.+||+.+|++|||+.|+++. +++.
T Consensus 258 ~~~~~~----~s~~~~~li~~~L~~dp~~R~s~~e~l~hp~~~~~ 298 (494)
T 3lij_A 258 SPEWKN----VSEGAKDLIKQMLQFDSQRRISAQQALEHPWIKEM 298 (494)
T ss_dssp SGGGTT----SCHHHHHHHHHHTCSSTTTSCCHHHHHTCHHHHHH
T ss_pred chhccc----CCHHHHHHHHHHCCCChhhCccHHHHhcCcccccC
Confidence 111111 22368899999999999999999999864 4443
No 189
>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.7e-39 Score=330.82 Aligned_cols=262 Identities=20% Similarity=0.213 Sum_probs=196.7
Q ss_pred HHHHhhcccCCCCceEEEEEEEc-CCcEEEEEEccCccch-----hHHHHHHHHHHHhhcCCCCccceeeEEEecCeeEE
Q 008707 235 ATNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCSH-----RTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRIL 308 (557)
Q Consensus 235 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-----~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~l 308 (557)
..|++.+.||+|+||.||+|.+. +|+.||+|++...... ..+.+.+|+++++.++||||+++++++.+.+..++
T Consensus 10 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 89 (346)
T 1ua2_A 10 KRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSNISL 89 (346)
T ss_dssp ---CEEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTTCCEE
T ss_pred cccEEEeEEeecCCEEEEEEEECCCCcEEEEEEEecCCcchhhhhhhHHHHHHHHHHhhCCCCCCCeEEEEEeeCCceEE
Confidence 45677899999999999999876 5899999998643221 12467899999999999999999999999999999
Q ss_pred EEEecCCCChhhhhhccCCCCCcCHHHHHHHHHHHHHHHHHHHcCCCCCeEeeccCCCCEEeCCCCcEEEecccCccccC
Q 008707 309 VYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAE 388 (557)
Q Consensus 309 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfgla~~~~ 388 (557)
||||+++ +|.+++.. ....+++..+..++.|+++||+|||+ .+|+||||||+||+++.++.+||+|||++....
T Consensus 90 v~e~~~~-~l~~~~~~--~~~~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~~ 163 (346)
T 1ua2_A 90 VFDFMET-DLEVIIKD--NSLVLTPSHIKAYMLMTLQGLEYLHQ---HWILHRDLKPNNLLLDENGVLKLADFGLAKSFG 163 (346)
T ss_dssp EEECCSE-EHHHHHTT--CCSSCCSSHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTCCEEECCCGGGSTTT
T ss_pred EEEcCCC-CHHHHHHh--cCcCCCHHHHHHHHHHHHHHHHHHHH---CCEECCCCCHHHEEEcCCCCEEEEecccceecc
Confidence 9999975 88888864 24568888999999999999999998 999999999999999999999999999998765
Q ss_pred CCCccccccccCCCCccCCcccCCC-CCCcccceehhHHHHHHHHhCCCCCCCCCccccccHHHHHHHHHhcCCcccccc
Q 008707 389 EDLTHISSVARGTVGYLDPEYYGNQ-QLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVD 467 (557)
Q Consensus 389 ~~~~~~~~~~~g~~~y~aPE~l~~~-~~s~~~DvwslG~ll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 467 (557)
..... .....||+.|+|||.+.+. .++.++|||||||++|+|++|..||.+.+.... +.. +.............+
T Consensus 164 ~~~~~-~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~~~~~~~~~~~--~~~-i~~~~~~~~~~~~~~ 239 (346)
T 1ua2_A 164 SPNRA-YTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQ--LTR-IFETLGTPTEEQWPD 239 (346)
T ss_dssp SCCCC-CCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHH--HHH-HHHHHCCCCTTTSSS
T ss_pred CCccc-CCcccccccccCchHhhCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCCHHHH--HHH-HHHHcCCCChhhhhh
Confidence 43222 2234589999999998664 588999999999999999999999975432211 111 111111111000000
Q ss_pred ------c---cccCCCC-----HHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 008707 468 ------P---VLIGNVK-----IESIWRIAEVAIQCVEQRGFSRPKMQEIVLA 506 (557)
Q Consensus 468 ------~---~l~~~~~-----~~~~~~l~~li~~cl~~~P~~RPt~~evl~~ 506 (557)
. ......+ ......+.+++.+||+.||++|||++|+++.
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 292 (346)
T 1ua2_A 240 MCSLPDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKM 292 (346)
T ss_dssp TTSSTTCCCCCCCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHTS
T ss_pred hccCcccccccccCCCChHHhhccCCHHHHHHHHHHhccChhhCCCHHHHhcC
Confidence 0 0000001 1123578899999999999999999999874
No 190
>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B
Probab=100.00 E-value=2.4e-39 Score=345.85 Aligned_cols=249 Identities=23% Similarity=0.317 Sum_probs=200.8
Q ss_pred hcccCCCCceEEEEEEEc-CCcEEEEEEccCcc---chhHHHHHHHHHHHhhcCCCCccceeeEEEecCeeEEEEEecCC
Q 008707 240 CKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSC---SHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYEYMHN 315 (557)
Q Consensus 240 ~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~lv~e~~~~ 315 (557)
.+.||+|+||.||+|..+ +|+.||+|++.... ....+.+.+|+++++.++||||+++++++.+.+..++||||++|
T Consensus 190 ~~~LG~G~fG~Vy~a~~~~tg~~vAiK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lVmE~~~g 269 (543)
T 3c4z_A 190 FRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAFETKTDLCLVMTIMNG 269 (543)
T ss_dssp EEEEEECSSSEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCCTT
T ss_pred EEEEeeCCCeEEEEEEECCCCcEEEEEEEEhHHhhhhHHHHHHHHHHHHHHhcCCCCEeeEEEEEeeCCEEEEEEEeccC
Confidence 467999999999999886 58999999986532 12346788999999999999999999999999999999999999
Q ss_pred CChhhhhhccC-CCCCcCHHHHHHHHHHHHHHHHHHHcCCCCCeEeeccCCCCEEeCCCCcEEEecccCccccCCCCccc
Q 008707 316 GTLRDRLHGSV-NQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEEDLTHI 394 (557)
Q Consensus 316 gsL~~~l~~~~-~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfgla~~~~~~~~~~ 394 (557)
|+|.+++.... ....+++..++.++.||+.||+|||+ .+|+||||||+|||++.++.+||+|||++.........
T Consensus 270 g~L~~~l~~~~~~~~~l~e~~~~~~~~qi~~aL~~LH~---~gIvHrDLKP~NILl~~~g~vkL~DFGla~~~~~~~~~- 345 (543)
T 3c4z_A 270 GDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQ---RNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTK- 345 (543)
T ss_dssp CBHHHHHHTSSTTSCSCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTSCEEECCCTTCEECCTTCCC-
T ss_pred CCHHHHHHHhhcccccccHHHHHHHHHHHHHHHHHHHH---cCCcccCCChHHEEEeCCCCEEEeecceeeeccCCCcc-
Confidence 99999987542 24569999999999999999999998 99999999999999999999999999999876543322
Q ss_pred cccccCCCCccCCcccCCCCCCcccceehhHHHHHHHHhCCCCCCCCCccccccHHHHHHHHHhcCCccccccccccCCC
Q 008707 395 SSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPVLIGNV 474 (557)
Q Consensus 395 ~~~~~g~~~y~aPE~l~~~~~s~~~DvwslG~ll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~ 474 (557)
.....||+.|+|||++.+..++.++|||||||++|||++|+.||....... ...+.... +..+.. .+
T Consensus 346 ~~~~~GT~~Y~APE~l~~~~~~~~~DiwSlGvilyelltG~~PF~~~~~~~--~~~~~~~~-i~~~~~----------~~ 412 (543)
T 3c4z_A 346 TKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKV--ENKELKQR-VLEQAV----------TY 412 (543)
T ss_dssp BCCCCSCTTTSCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCTTCCC--CHHHHHHH-HHHCCC----------CC
T ss_pred cccccCCccccChhhhcCCCCChHHhcCcchHHHHHHHhCCCCCCCCccch--hHHHHHHH-Hhhccc----------CC
Confidence 233469999999999999999999999999999999999999997543221 11222222 212111 01
Q ss_pred CHHHHHHHHHHHHHccccCCCCCCCH-----HHHHH
Q 008707 475 KIESIWRIAEVAIQCVEQRGFSRPKM-----QEIVL 505 (557)
Q Consensus 475 ~~~~~~~l~~li~~cl~~~P~~RPt~-----~evl~ 505 (557)
+...+..+.+++.+||+.||++||++ +||++
T Consensus 413 p~~~s~~~~~li~~lL~~dP~~R~~~~~~~a~ei~~ 448 (543)
T 3c4z_A 413 PDKFSPASKDFCEALLQKDPEKRLGFRDGSCDGLRT 448 (543)
T ss_dssp CTTSCHHHHHHHHHHSCSSGGGSCCCBTTBSHHHHT
T ss_pred CcccCHHHHHHHHHhccCCHhHCCCCcccCHHHHHc
Confidence 11223478899999999999999975 56653
No 191
>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*
Probab=100.00 E-value=1.1e-39 Score=325.51 Aligned_cols=250 Identities=20% Similarity=0.353 Sum_probs=196.4
Q ss_pred HHHhhcccCCCCceEEEEEEEc-CCcEEEEEEccCccchhHHHHHHHHHHHhhcCCCCccceeeEEEecCeeEEEEEecC
Q 008707 236 TNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCSHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYEYMH 314 (557)
Q Consensus 236 ~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~lv~e~~~ 314 (557)
.|++.+.||+|+||.||+|.+. +++.||+|++........+.+.+|+++++.++||||+++++++...+..++||||++
T Consensus 20 ~y~i~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 99 (302)
T 2j7t_A 20 VWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYYHDGKLWIMIEFCP 99 (302)
T ss_dssp TEEEEEEEECSTTCCEEEEEETTTCCEEEEEEEC----CCHHHHHHHHHHHHHCCCTTBCCEEEEEECC-CEEEEEECCT
T ss_pred ceeecceeccCCCeEEEEEEEcCCCcEEEEEEecCCCHHHHHHHHHHHHHHhcCCCCCEeeeeeeeeeCCeEEEEEEeCC
Confidence 3556789999999999999886 588999999876655566789999999999999999999999999999999999999
Q ss_pred CCChhhhhhccCCCCCcCHHHHHHHHHHHHHHHHHHHcCCCCCeEeeccCCCCEEeCCCCcEEEecccCccccCCCCccc
Q 008707 315 NGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEEDLTHI 394 (557)
Q Consensus 315 ~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfgla~~~~~~~~~~ 394 (557)
+++|.+++... ...+++..+..++.|++.||+|||+ .+++||||||+||+++.++.+||+|||++........ .
T Consensus 100 ~~~l~~~~~~~--~~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~-~ 173 (302)
T 2j7t_A 100 GGAVDAIMLEL--DRGLTEPQIQVVCRQMLEALNFLHS---KRIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQ-K 173 (302)
T ss_dssp TEEHHHHHHHH--TSCCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCSGGGEEECTTSCEEECCCHHHHHHHHHHH-C
T ss_pred CCcHHHHHHhh--ccCCCHHHHHHHHHHHHHHHHHHhc---CCcccCCCCHHHEEECCCCCEEEEECCCCcccccccc-c
Confidence 99999988643 4568999999999999999999998 9999999999999999999999999998764322111 1
Q ss_pred cccccCCCCccCCccc-----CCCCCCcccceehhHHHHHHHHhCCCCCCCCCccccccHHHHHHHHHhcCCcccccccc
Q 008707 395 SSVARGTVGYLDPEYY-----GNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPV 469 (557)
Q Consensus 395 ~~~~~g~~~y~aPE~l-----~~~~~s~~~DvwslG~ll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 469 (557)
.....|++.|+|||.+ .+..++.++||||||+++|+|++|+.||...+.. ....... .+.......
T Consensus 174 ~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~------~~~~~~~-~~~~~~~~~-- 244 (302)
T 2j7t_A 174 RDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPM------RVLLKIA-KSDPPTLLT-- 244 (302)
T ss_dssp -----CCGGGCCHHHHHHHHTTSTTTTTHHHHHHHHHHHHHHHHSSCTTTTSCHH------HHHHHHH-HSCCCCCSS--
T ss_pred cccccCChhhcCCeeeccccCCCCCCchhhhHHHHHHHHHHHhcCCCCCccCCHH------HHHHHHh-ccCCcccCC--
Confidence 1223589999999998 4667889999999999999999999999743321 1111111 121111111
Q ss_pred ccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 008707 470 LIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 505 (557)
Q Consensus 470 l~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~evl~ 505 (557)
+...+..+.+++.+||+.||++|||+.|+++
T Consensus 245 -----~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~ 275 (302)
T 2j7t_A 245 -----PSKWSVEFRDFLKIALDKNPETRPSAAQLLE 275 (302)
T ss_dssp -----GGGSCHHHHHHHHHHSCSCTTTSCCHHHHTT
T ss_pred -----ccccCHHHHHHHHHHcccChhhCCCHHHHhc
Confidence 1112346889999999999999999999974
No 192
>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}
Probab=100.00 E-value=4.7e-39 Score=322.87 Aligned_cols=250 Identities=26% Similarity=0.360 Sum_probs=198.7
Q ss_pred HHHHHhhcccCCCCceEEEEEEEc-CCcEEEEEEccCccchhHHHHHHHHHHHhhcCCCCccceeeEEEecCeeEEEEEe
Q 008707 234 EATNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCSHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYEY 312 (557)
Q Consensus 234 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~lv~e~ 312 (557)
...|++.+.||+|+||.||+|... +|+.||+|++.... ..+.+.+|+++++.++||||+++++++...+..++||||
T Consensus 28 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~--~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 105 (314)
T 3com_A 28 EEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVES--DLQEIIKEISIMQQCDSPHVVKYYGSYFKNTDLWIVMEY 105 (314)
T ss_dssp --CEEEEEECC----CEEEEEEETTTCCEEEEEEEETTS--CCHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred hhhhhhheeeccCCCeEEEEEEECCCCCEEEEEecCchH--HHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEeec
Confidence 344566789999999999999876 58999999986532 346788999999999999999999999999999999999
Q ss_pred cCCCChhhhhhccCCCCCcCHHHHHHHHHHHHHHHHHHHcCCCCCeEeeccCCCCEEeCCCCcEEEecccCccccCCCCc
Q 008707 313 MHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEEDLT 392 (557)
Q Consensus 313 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfgla~~~~~~~~ 392 (557)
+++++|.+++... ...+++..+..++.|++.||+|||+ .+++|+||||+||+++.++.+||+|||++........
T Consensus 106 ~~~~~L~~~~~~~--~~~~~~~~~~~i~~~i~~~l~~lH~---~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~ 180 (314)
T 3com_A 106 CGAGSVSDIIRLR--NKTLTEDEIATILQSTLKGLEYLHF---MRKIHRDIKAGNILLNTEGHAKLADFGVAGQLTDTMA 180 (314)
T ss_dssp CTTEEHHHHHHHH--TCCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTCCEEECCCTTCEECBTTBS
T ss_pred CCCCCHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHh---CCCcCCCcCHHHEEECCCCCEEEeecccchhhhhhcc
Confidence 9999999998642 4568999999999999999999998 9999999999999999999999999999987654322
Q ss_pred cccccccCCCCccCCcccCCCCCCcccceehhHHHHHHHHhCCCCCCCCCccccccHHHHHHHHHhcCCccccccccccC
Q 008707 393 HISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPVLIG 472 (557)
Q Consensus 393 ~~~~~~~g~~~y~aPE~l~~~~~s~~~DvwslG~ll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~ 472 (557)
. .....|++.|+|||.+.+..++.++||||||+++|+|++|+.||....... ... .+..+.......
T Consensus 181 ~-~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~------~~~-~~~~~~~~~~~~----- 247 (314)
T 3com_A 181 K-RNTVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPYADIHPMR------AIF-MIPTNPPPTFRK----- 247 (314)
T ss_dssp C-BCCCCSCGGGCCHHHHSSSCBCTTHHHHHHHHHHHHHHHSSCTTTTSCHHH------HHH-HHHHSCCCCCSS-----
T ss_pred c-cCccCCCCCccChhhcCCCCCCccccHHHHHHHHHHHHhCCCCCCCCChHH------HHH-HHhcCCCcccCC-----
Confidence 2 223458999999999999999999999999999999999999997433211 111 111111111111
Q ss_pred CCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 008707 473 NVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 505 (557)
Q Consensus 473 ~~~~~~~~~l~~li~~cl~~~P~~RPt~~evl~ 505 (557)
....+..+.+++.+||..||++|||+.|+++
T Consensus 248 --~~~~~~~l~~li~~~l~~dp~~Rpt~~~ll~ 278 (314)
T 3com_A 248 --PELWSDNFTDFVKQCLVKSPEQRATATQLLQ 278 (314)
T ss_dssp --GGGSCHHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred --cccCCHHHHHHHHHHccCChhhCcCHHHHHh
Confidence 1112347889999999999999999999986
No 193
>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*
Probab=100.00 E-value=4.3e-39 Score=343.06 Aligned_cols=251 Identities=26% Similarity=0.347 Sum_probs=201.9
Q ss_pred HHHHHhhcccCCCCceEEEEEEEc-CCcEEEEEEccCcc--chhHHHHHHHHHHHhhcCCCCccceeeEEEecCeeEEEE
Q 008707 234 EATNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSC--SHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVY 310 (557)
Q Consensus 234 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~lv~ 310 (557)
...|++.+.||+|+||+||+|... +++.||+|++.... ......+.+|++++++++||||+++++++.+....++||
T Consensus 21 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~ 100 (486)
T 3mwu_A 21 AERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVG 100 (486)
T ss_dssp HHHEEEEEEEECCSSSEEEEEEETTTCCEEEEEEEEHHHHBCSCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hcceEEeEEEeecCCEEEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHHHhCCCCCcCeEEEEEEcCCEEEEEE
Confidence 466788999999999999999876 68999999985432 234567899999999999999999999999999999999
Q ss_pred EecCCCChhhhhhccCCCCCcCHHHHHHHHHHHHHHHHHHHcCCCCCeEeeccCCCCEEeC---CCCcEEEecccCcccc
Q 008707 311 EYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLD---INMRAKVSDFGLSRQA 387 (557)
Q Consensus 311 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~dlk~~NIll~---~~~~~kl~Dfgla~~~ 387 (557)
||+.+|+|.+.+.. ...+++..+..++.||+.||+|||+ .+|+||||||+|||++ .++.+||+|||++...
T Consensus 101 e~~~~~~L~~~~~~---~~~~~~~~~~~i~~qi~~al~~lH~---~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~ 174 (486)
T 3mwu_A 101 ELYTGGELFDEIIK---RKRFSEHDAARIIKQVFSGITYMHK---HNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCF 174 (486)
T ss_dssp CCCCSCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEESSSSTTCCEEECSCSCTTTB
T ss_pred EcCCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHH---CCeEeccCchHHEEEecCCCCCCEEEEECCcCeEC
Confidence 99999999998874 3568999999999999999999998 9999999999999995 4567999999999876
Q ss_pred CCCCccccccccCCCCccCCcccCCCCCCcccceehhHHHHHHHHhCCCCCCCCCccccccHHHHHHHHHhcCCcccccc
Q 008707 388 EEDLTHISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVD 467 (557)
Q Consensus 388 ~~~~~~~~~~~~g~~~y~aPE~l~~~~~s~~~DvwslG~ll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 467 (557)
..... .....||+.|+|||++.+ .++.++||||+||++|+|++|+.||.+..... . ...+..+.......
T Consensus 175 ~~~~~--~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~------~-~~~i~~~~~~~~~~ 244 (486)
T 3mwu_A 175 QQNTK--MKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNEYD------I-LKRVETGKYAFDLP 244 (486)
T ss_dssp CCC------CCTTGGGGCCGGGGGS-CCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHH------H-HHHHHHTCCCSCSG
T ss_pred CCCCc--cCCCcCCCCCCCHHHhCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH------H-HHHHHhCCCCCCCc
Confidence 54322 223458999999999976 58999999999999999999999997543211 1 12222222211000
Q ss_pred ccccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 008707 468 PVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLA 506 (557)
Q Consensus 468 ~~l~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~evl~~ 506 (557)
.. ......+.+++.+||+.+|++|||+.|+++.
T Consensus 245 --~~----~~~s~~~~~li~~~L~~dp~~R~t~~~~l~h 277 (486)
T 3mwu_A 245 --QW----RTISDDAKDLIRKMLTFHPSLRITATQCLEH 277 (486)
T ss_dssp --GG----GGSCHHHHHHHHHHTCSSTTTSCCHHHHHHC
T ss_pred --cc----CCCCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 00 1123468899999999999999999999874
No 194
>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}
Probab=100.00 E-value=3.5e-39 Score=322.39 Aligned_cols=248 Identities=23% Similarity=0.331 Sum_probs=195.5
Q ss_pred HHhhcccCCCCceEEEEEEEc-CCcEEEEEEccCcc----chhHHHHHHHHHHHhhcCCCCccceeeEEE--ecCeeEEE
Q 008707 237 NNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSC----SHRTQQFVTEVALLSRIHHRNLVPLIGYCE--EEHQRILV 309 (557)
Q Consensus 237 ~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~----~~~~~~~~~E~~il~~l~h~nIv~~~~~~~--~~~~~~lv 309 (557)
|++.+.||+|+||.||+|... +++.||+|++.... ....+.+.+|+++++.++||||+++++++. +....++|
T Consensus 7 y~i~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv 86 (305)
T 2wtk_C 7 YLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQLVDVLYNEEKQKMYMV 86 (305)
T ss_dssp BCCCCEEEECSSCEEEEEEBTTTCCEEEEEEECHHHHHHSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECC---CEEEE
T ss_pred eeEeeEEecCCCeEEEEEEECCCCcEEEEEEeccccccccchhHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCCCeEEEE
Confidence 456789999999999999875 58899999986532 234567899999999999999999999984 45578999
Q ss_pred EEecCCCChhhhhhccCCCCCcCHHHHHHHHHHHHHHHHHHHcCCCCCeEeeccCCCCEEeCCCCcEEEecccCccccCC
Q 008707 310 YEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEE 389 (557)
Q Consensus 310 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfgla~~~~~ 389 (557)
|||+.++ |.+.+... ....+++..+..++.||+.||+|||+ ++++||||||+||+++.++.+||+|||++.....
T Consensus 87 ~e~~~~~-l~~~~~~~-~~~~~~~~~~~~~~~qi~~al~~LH~---~~i~H~dlkp~NIl~~~~~~~kl~dfg~~~~~~~ 161 (305)
T 2wtk_C 87 MEYCVCG-MQEMLDSV-PEKRFPVCQAHGYFCQLIDGLEYLHS---QGIVHKDIKPGNLLLTTGGTLKISALGVAEALHP 161 (305)
T ss_dssp EECCSEE-HHHHHHHS-TTCSCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTCCEEECCCTTCEECCT
T ss_pred ehhccCC-HHHHHHhC-cccccCHHHHHHHHHHHHHHHHHHHH---CCeeecCCCcccEEEcCCCcEEeeccccccccCc
Confidence 9999876 77777644 35678999999999999999999998 9999999999999999999999999999987643
Q ss_pred CC-ccccccccCCCCccCCcccCCCC--CCcccceehhHHHHHHHHhCCCCCCCCCccccccHHHHHHHHHhcCCccccc
Q 008707 390 DL-THISSVARGTVGYLDPEYYGNQQ--LTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIV 466 (557)
Q Consensus 390 ~~-~~~~~~~~g~~~y~aPE~l~~~~--~s~~~DvwslG~ll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 466 (557)
.. ........|++.|+|||.+.+.. ++.++||||||+++|+|++|+.||...+.. .. ...+..+...
T Consensus 162 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~------~~-~~~i~~~~~~--- 231 (305)
T 2wtk_C 162 FAADDTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDNIY------KL-FENIGKGSYA--- 231 (305)
T ss_dssp TCSSCEECCCCSCGGGCCHHHHTCCSCEESHHHHHHHHHHHHHHHHHSSCSCCCSSHH------HH-HHHHHHCCCC---
T ss_pred cccccccccCCCCCCCcChhhccCcccCCcchhhHHHHHHHHHHHHhCCCCCCCchHH------HH-HHHHhcCCCC---
Confidence 22 22223445899999999997654 377999999999999999999999744321 11 1222222211
Q ss_pred cccccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 008707 467 DPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLA 506 (557)
Q Consensus 467 d~~l~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~evl~~ 506 (557)
+... ....+.+++.+||+.||++|||++|+++.
T Consensus 232 ---~~~~----~~~~l~~li~~~l~~dp~~Rps~~~ll~~ 264 (305)
T 2wtk_C 232 ---IPGD----CGPPLSDLLKGMLEYEPAKRFSIRQIRQH 264 (305)
T ss_dssp ---CCSS----SCHHHHHHHHHHTCSSTTTSCCHHHHHHS
T ss_pred ---CCCc----cCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 1111 23367899999999999999999999964
No 195
>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A
Probab=100.00 E-value=3.6e-39 Score=330.80 Aligned_cols=249 Identities=26% Similarity=0.366 Sum_probs=199.0
Q ss_pred HHHhhcccCCCCceEEEEEEEc-CCcEEEEEEccCccc--------hhHHHHHHHHHHHhhc-CCCCccceeeEEEecCe
Q 008707 236 TNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCS--------HRTQQFVTEVALLSRI-HHRNLVPLIGYCEEEHQ 305 (557)
Q Consensus 236 ~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--------~~~~~~~~E~~il~~l-~h~nIv~~~~~~~~~~~ 305 (557)
.|++.+.||+|+||.||+|.+. +|+.||||++..... ...+.+.+|+.+++.+ +||||+++++++...+.
T Consensus 95 ~y~~~~~lg~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~ 174 (365)
T 2y7j_A 95 KYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLIDSYESSSF 174 (365)
T ss_dssp HEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEEBSSE
T ss_pred hcccceEEecCCCEEEEEEEECCCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeEEEEEEeeCCE
Confidence 3445689999999999999986 699999999865321 1245678999999999 79999999999999999
Q ss_pred eEEEEEecCCCChhhhhhccCCCCCcCHHHHHHHHHHHHHHHHHHHcCCCCCeEeeccCCCCEEeCCCCcEEEecccCcc
Q 008707 306 RILVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSR 385 (557)
Q Consensus 306 ~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfgla~ 385 (557)
.++||||+++++|.+++.. ...+++..+..++.||+.||+|||+ .|++|+||||+||+++.++.+||+|||++.
T Consensus 175 ~~lv~e~~~g~~L~~~l~~---~~~l~~~~~~~i~~qi~~~L~~LH~---~gi~H~Dlkp~NIl~~~~~~ikl~DfG~~~ 248 (365)
T 2y7j_A 175 MFLVFDLMRKGELFDYLTE---KVALSEKETRSIMRSLLEAVSFLHA---NNIVHRDLKPENILLDDNMQIRLSDFGFSC 248 (365)
T ss_dssp EEEEECCCTTCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTCCEEECCCTTCE
T ss_pred EEEEEEeCCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEECCCCCEEEEecCccc
Confidence 9999999999999999874 3568999999999999999999998 999999999999999999999999999998
Q ss_pred ccCCCCccccccccCCCCccCCcccC------CCCCCcccceehhHHHHHHHHhCCCCCCCCCccccccHHHHHHHHHhc
Q 008707 386 QAEEDLTHISSVARGTVGYLDPEYYG------NQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKK 459 (557)
Q Consensus 386 ~~~~~~~~~~~~~~g~~~y~aPE~l~------~~~~s~~~DvwslG~ll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~ 459 (557)
....... .....||+.|+|||++. ...++.++||||||+++|+|++|..||....... . ...+..
T Consensus 249 ~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~---~----~~~i~~ 319 (365)
T 2y7j_A 249 HLEPGEK--LRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHRRQIL---M----LRMIME 319 (365)
T ss_dssp ECCTTCC--BCCCCSCGGGCCHHHHHHTTCTTSCCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHH---H----HHHHHH
T ss_pred ccCCCcc--cccCCCCCCccChhhccccccccCcCCCchhhHHhHHHHHHHHHHCCCCCCCCCHHH---H----HHHHHh
Confidence 7654322 22345899999999985 3367889999999999999999999997432211 1 111222
Q ss_pred CCccccccccccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 008707 460 GDVISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 505 (557)
Q Consensus 460 ~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~evl~ 505 (557)
+..... .+ .... .+..+.+++.+||+.||++|||+.|+++
T Consensus 320 ~~~~~~-~~-~~~~----~~~~~~~li~~~L~~dP~~Rps~~ell~ 359 (365)
T 2y7j_A 320 GQYQFS-SP-EWDD----RSSTVKDLISRLLQVDPEARLTAEQALQ 359 (365)
T ss_dssp TCCCCC-HH-HHSS----SCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred CCCCCC-Cc-cccc----CCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 211100 00 0011 1236889999999999999999999986
No 196
>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}
Probab=100.00 E-value=2.2e-39 Score=342.78 Aligned_cols=191 Identities=26% Similarity=0.389 Sum_probs=152.1
Q ss_pred HHHhhcccCCCCceEEEEEEEc-CCcEEEEEEccCcc--chhHHHHHHHHHHHhhcCCCCccceeeEEEe-----cCeeE
Q 008707 236 TNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSC--SHRTQQFVTEVALLSRIHHRNLVPLIGYCEE-----EHQRI 307 (557)
Q Consensus 236 ~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~-----~~~~~ 307 (557)
.|++.+.||+|+||.||+|.+. +++.||||++.... ....+.+.+|+++++.++||||+++++++.. ....+
T Consensus 54 ~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~ 133 (458)
T 3rp9_A 54 RYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHVVKVLDIVIPKDVEKFDELY 133 (458)
T ss_dssp TEEECCC-------CEEEEEECC--CEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCCEE
T ss_pred CeEEeeEeeecCCeEEEEEEECCCCcEEEEEEechhhcCHHHHHHHHHHHHHHHhCCCCCCCceEEEEecCCcccCceEE
Confidence 4567899999999999999866 68999999986532 3345678999999999999999999999843 35689
Q ss_pred EEEEecCCCChhhhhhccCCCCCcCHHHHHHHHHHHHHHHHHHHcCCCCCeEeeccCCCCEEeCCCCcEEEecccCcccc
Q 008707 308 LVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQA 387 (557)
Q Consensus 308 lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfgla~~~ 387 (557)
+|||++ +++|.+++. ....+++..+..++.||+.||+|||+ .+|+||||||+|||++.++.+||+|||+++..
T Consensus 134 lv~e~~-~~~L~~~~~---~~~~l~~~~~~~~~~qi~~aL~~LH~---~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~ 206 (458)
T 3rp9_A 134 VVLEIA-DSDFKKLFR---TPVYLTELHIKTLLYNLLVGVKYVHS---AGILHRDLKPANCLVNQDCSVKVCDFGLARTV 206 (458)
T ss_dssp EEECCC-SEEHHHHHH---SSCCCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCCGGGEEECTTCCEEECCCTTCBCT
T ss_pred EEEecc-ccchhhhcc---cCCCCCHHHHHHHHHHHHHHHHHHHh---CCcCCCCCChhhEEECCCCCEeecccccchhc
Confidence 999998 579999887 34679999999999999999999999 99999999999999999999999999999876
Q ss_pred CCCCcc--------------------------ccccccCCCCccCCccc-CCCCCCcccceehhHHHHHHHHh
Q 008707 388 EEDLTH--------------------------ISSVARGTVGYLDPEYY-GNQQLTEKSDVYSFGVVLLELIS 433 (557)
Q Consensus 388 ~~~~~~--------------------------~~~~~~g~~~y~aPE~l-~~~~~s~~~DvwslG~ll~ellt 433 (557)
...... ......||+.|+|||++ ....++.++|||||||++|||++
T Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~DiwSlG~il~ellt 279 (458)
T 3rp9_A 207 DYPENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLN 279 (458)
T ss_dssp TSCTTCCCCCC---------------------------CCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHT
T ss_pred cCccccccccccCccccccccccccccccccccccCCcccccccChHHhhCCCCCCcHhHHHHHHHHHHHHHH
Confidence 432110 12234579999999976 56679999999999999999999
No 197
>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*
Probab=100.00 E-value=2.7e-39 Score=335.31 Aligned_cols=268 Identities=22% Similarity=0.274 Sum_probs=205.0
Q ss_pred ChhHHHHHHHHhhcccCCCCceEEEEEEEc-CCcEEEEEEccCccchhHHHHHHHHHHHhhcC--------CCCccceee
Q 008707 228 PLPELEEATNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCSHRTQQFVTEVALLSRIH--------HRNLVPLIG 298 (557)
Q Consensus 228 ~~~~~~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~il~~l~--------h~nIv~~~~ 298 (557)
...++....|++.+.||+|+||.||+|... +++.||+|++... ....+.+.+|+++++.++ |+||+++++
T Consensus 30 ~~g~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~~~~iv~~~~ 108 (397)
T 1wak_A 30 KIGDLFNGRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSA-EHYTETALDEIRLLKSVRNSDPNDPNREMVVQLLD 108 (397)
T ss_dssp CTTCEETTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHHSCTTCGGGGGBCCEEE
T ss_pred ehhhhcCCeEEEEEEeeecCCeeEEEEEecCCCeEEEEEEEecC-CcchHHHHHHHHHHHHHhhcCCCCCCcceeeeeec
Confidence 334444456778899999999999999865 5889999998754 344567889999999996 788999999
Q ss_pred EEE----ecCeeEEEEEecCCCChhhhhhccCCCCCcCHHHHHHHHHHHHHHHHHHHcCCCC-CeEeeccCCCCEEeCCC
Q 008707 299 YCE----EEHQRILVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNP-GIIHRDVKSSNILLDIN 373 (557)
Q Consensus 299 ~~~----~~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~-~ivH~dlk~~NIll~~~ 373 (557)
++. +....++||||+ +++|.+.+... ....+++..++.++.||+.||+|||+ + ||+||||||+|||++.+
T Consensus 109 ~~~~~~~~~~~~~lv~e~~-~~~l~~~~~~~-~~~~~~~~~~~~i~~qi~~aL~~lH~---~~givHrDikp~NIll~~~ 183 (397)
T 1wak_A 109 DFKISGVNGTHICMVFEVL-GHHLLKWIIKS-NYQGLPLPCVKKIIQQVLQGLDYLHT---KCRIIHTDIKPENILLSVN 183 (397)
T ss_dssp EEEEEETTEEEEEEEECCC-CCBHHHHHHHT-TTSCCCHHHHHHHHHHHHHHHHHHHH---TTCEECCCCSGGGEEECCC
T ss_pred ceeecCCCCceEEEEEecc-CccHHHHHHhc-ccCCCCHHHHHHHHHHHHHHHHHHHH---hCCEecCCCCHHHeeEecc
Confidence 987 556789999999 66776666543 23568999999999999999999998 7 99999999999999977
Q ss_pred C-------------------------------------------------cEEEecccCccccCCCCccccccccCCCCc
Q 008707 374 M-------------------------------------------------RAKVSDFGLSRQAEEDLTHISSVARGTVGY 404 (557)
Q Consensus 374 ~-------------------------------------------------~~kl~Dfgla~~~~~~~~~~~~~~~g~~~y 404 (557)
+ .+||+|||++....... ....||+.|
T Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DfG~a~~~~~~~----~~~~gt~~y 259 (397)
T 1wak_A 184 EQYIRRLAAEATEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKHF----TEDIQTRQY 259 (397)
T ss_dssp HHHHHHHHHHHC---------------------CCTTSCCTTSGGGGGGCCEEECCGGGCEETTBCS----CSCCSCGGG
T ss_pred chhhhhhhhhhHHHhhcCCCCCCCCccccCCcccccccccccccccccccceEeccccccccccccC----ccCCCCCcc
Confidence 5 79999999998765432 223589999
Q ss_pred cCCcccCCCCCCcccceehhHHHHHHHHhCCCCCCCCCcccccc---HHHHHHHHHhc--------CCcc-cccccc---
Q 008707 405 LDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELN---IVHWARSMIKK--------GDVI-SIVDPV--- 469 (557)
Q Consensus 405 ~aPE~l~~~~~s~~~DvwslG~ll~elltg~~pf~~~~~~~~~~---~~~~~~~~~~~--------~~~~-~~~d~~--- 469 (557)
+|||++.+..++.++|||||||++|||+||+.||...+...... ........... +... ..+...
T Consensus 260 ~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~ 339 (397)
T 1wak_A 260 RSLEVLIGSGYNTPADIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALIIELLGKVPRKLIVAGKYSKEFFTKKGDL 339 (397)
T ss_dssp CCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSCCCCCCSSSCHHHHHHHHHHHHHCSCCHHHHHHCTTGGGTBCTTSSB
T ss_pred cCChhhcCCCCCcHHHHHHHHHHHHHHhhCCCCCCCCcccccCchHHHHHHHHHhcCCCChHHhhcccccccccCCcccc
Confidence 99999999999999999999999999999999998554432221 11111111111 1000 000000
Q ss_pred --------------c--cCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 008707 470 --------------L--IGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 505 (557)
Q Consensus 470 --------------l--~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~evl~ 505 (557)
+ ...........+.+++.+||+.||++|||++|+++
T Consensus 340 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 391 (397)
T 1wak_A 340 KHITKLKPWGLFEVLVEKYEWSQEEAAGFTDFLLPMLELIPEKRATAAECLR 391 (397)
T ss_dssp SSCCCCCCCCHHHHHHHTSCCCHHHHHHHHHHHGGGGCSSGGGSCCHHHHHT
T ss_pred ccccccCCcchhHhhhhhcccchhhHHHHHHHHHHHhccChhhcCCHHHHhh
Confidence 0 01234566778999999999999999999999985
No 198
>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.1e-39 Score=334.72 Aligned_cols=261 Identities=22% Similarity=0.296 Sum_probs=194.5
Q ss_pred HHHhhcccCCCCceEEEEEEEc-CCcEEEEEEccCcc--chhHHHHHHHHHHHhhcCCCCccceeeEEEecC------ee
Q 008707 236 TNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSC--SHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEH------QR 306 (557)
Q Consensus 236 ~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~------~~ 306 (557)
.|++.+.||+|+||.||+|... +|+.||||++.... ....+.+.+|+++++.++||||+++++++.... ..
T Consensus 26 ~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~~~ 105 (367)
T 1cm8_A 26 VYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFTDF 105 (367)
T ss_dssp SEEEEEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTCCCC
T ss_pred eEEEeEEeeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCcCCCCceeeEecCCccccCceE
Confidence 3556789999999999999875 68999999985432 234567889999999999999999999997653 45
Q ss_pred EEEEEecCCCChhhhhhccCCCCCcCHHHHHHHHHHHHHHHHHHHcCCCCCeEeeccCCCCEEeCCCCcEEEecccCccc
Q 008707 307 ILVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQ 386 (557)
Q Consensus 307 ~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfgla~~ 386 (557)
++||||+ +++|.+++.. ..+++..+..++.||+.||+|||+ .||+||||||+||+++.++.+||+|||+++.
T Consensus 106 ~lv~e~~-~~~L~~~~~~----~~l~~~~~~~~~~qi~~~L~~LH~---~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~ 177 (367)
T 1cm8_A 106 YLVMPFM-GTDLGKLMKH----EKLGEDRIQFLVYQMLKGLRYIHA---AGIIHRDLKPGNLAVNEDCELKILDFGLARQ 177 (367)
T ss_dssp EEEEECC-SEEHHHHHHH----CCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTCCEEECCCTTCEE
T ss_pred EEEEecC-CCCHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHH---CCccccCcCHHHEEEcCCCCEEEEeeecccc
Confidence 9999999 8899999874 458899999999999999999998 9999999999999999999999999999987
Q ss_pred cCCCCccccccccCCCCccCCcccCC-CCCCcccceehhHHHHHHHHhCCCCCCCCCccccccHHHHHHHHHhcCC----
Q 008707 387 AEEDLTHISSVARGTVGYLDPEYYGN-QQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGD---- 461 (557)
Q Consensus 387 ~~~~~~~~~~~~~g~~~y~aPE~l~~-~~~s~~~DvwslG~ll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~---- 461 (557)
..... ....+|+.|+|||++.+ ..++.++||||+||++|||++|+.||.+.+..+... .+......-.
T Consensus 178 ~~~~~----~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~l~---~i~~~~g~~~~~~~ 250 (367)
T 1cm8_A 178 ADSEM----TGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLK---EIMKVTGTPPAEFV 250 (367)
T ss_dssp CCSSC----CSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHH---HHHHHHCCCCHHHH
T ss_pred ccccc----CcCcCCCCcCCHHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCCCHHHHHH---HHHHhcCCCCHHHH
Confidence 65432 23458999999999877 688999999999999999999999998654322111 1111100000
Q ss_pred --------------ccccccccccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHH--HHhhhh
Q 008707 462 --------------VISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLA--IQDSIK 512 (557)
Q Consensus 462 --------------~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~evl~~--L~~~~~ 512 (557)
........+ ..........+.+++.+||..||++|||++|+++. +++...
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ll~~mL~~dP~~R~t~~e~l~hp~f~~~~~ 316 (367)
T 1cm8_A 251 QRLQSDEAKNYMKGLPELEKKDF-ASILTNASPLAVNLLEKMLVLDAEQRVTAGEALAHPYFESLHD 316 (367)
T ss_dssp HTCSCHHHHHHHHHSCCCCCCCG-GGTCTTCCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGTTTC-
T ss_pred HHhhhHHHHHHHHhCCCCCCCCH-HHHCCCCCHHHHHHHHHHccCChhHCCCHHHHhcChHHHhhcC
Confidence 000000000 01111223468899999999999999999999883 544433
No 199
>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*
Probab=100.00 E-value=2.8e-39 Score=344.44 Aligned_cols=252 Identities=27% Similarity=0.359 Sum_probs=205.1
Q ss_pred HHHHHHhhcccCCCCceEEEEEEEc-CCcEEEEEEccCcc---chhHHHHHHHHHHHhhcCCCCccceeeEEEecCeeEE
Q 008707 233 EEATNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSC---SHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRIL 308 (557)
Q Consensus 233 ~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~l 308 (557)
....|++.+.||+|+||.||+|... +|+.||||++.... ....+.+.+|++++++++||||+++++++.+.+..++
T Consensus 24 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~l 103 (484)
T 3nyv_A 24 FSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYL 103 (484)
T ss_dssp HHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCBSSCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEE
T ss_pred ccCceEEeeEEecCCCEEEEEEEECCCCCEEEEEEEEhhhcccchHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEE
Confidence 4567788899999999999999876 68999999985432 3346779999999999999999999999999999999
Q ss_pred EEEecCCCChhhhhhccCCCCCcCHHHHHHHHHHHHHHHHHHHcCCCCCeEeeccCCCCEEe---CCCCcEEEecccCcc
Q 008707 309 VYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILL---DINMRAKVSDFGLSR 385 (557)
Q Consensus 309 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~dlk~~NIll---~~~~~~kl~Dfgla~ 385 (557)
||||+.+|+|.+.+.. ...+++..+..++.||+.||+|||+ ++|+||||||+|||+ +.++.+||+|||++.
T Consensus 104 v~e~~~~~~L~~~~~~---~~~~~~~~~~~i~~qi~~~l~~lH~---~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~ 177 (484)
T 3nyv_A 104 VGEVYTGGELFDEIIS---RKRFSEVDAARIIRQVLSGITYMHK---NKIVHRDLKPENLLLESKSKDANIRIIDFGLST 177 (484)
T ss_dssp EECCCCSCBHHHHHHT---CSCCBHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEESSSSTTCCEEECCTTHHH
T ss_pred EEecCCCCCHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHH---CCeeeCCCCHHHEEEecCCCCCcEEEEeeeeeE
Confidence 9999999999998873 4668999999999999999999998 999999999999999 567889999999998
Q ss_pred ccCCCCccccccccCCCCccCCcccCCCCCCcccceehhHHHHHHHHhCCCCCCCCCccccccHHHHHHHHHhcCCcccc
Q 008707 386 QAEEDLTHISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISI 465 (557)
Q Consensus 386 ~~~~~~~~~~~~~~g~~~y~aPE~l~~~~~s~~~DvwslG~ll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 465 (557)
....... .....||+.|+|||++.+ .++.++||||+||++|+|++|..||...+... ....+..+.....
T Consensus 178 ~~~~~~~--~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~-------~~~~i~~~~~~~~ 247 (484)
T 3nyv_A 178 HFEASKK--MKDKIGTAYYIAPEVLHG-TYDEKCDVWSTGVILYILLSGCPPFNGANEYD-------ILKKVEKGKYTFE 247 (484)
T ss_dssp HBCCCCS--HHHHTTGGGTCCHHHHHT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH-------HHHHHHHCCCCCC
T ss_pred Ecccccc--cccCCCCccccCceeecC-CCCCcceeHHHHHHHHHHHHCCCCCCCCCHHH-------HHHHHHcCCCCCC
Confidence 7654332 223458999999999876 68999999999999999999999997543211 1122223322110
Q ss_pred ccccccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 008707 466 VDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLA 506 (557)
Q Consensus 466 ~d~~l~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~evl~~ 506 (557)
.. ... ..+..+.+++.+||+.+|++|||+.|+++.
T Consensus 248 ~~--~~~----~~s~~~~~li~~~L~~dp~~R~s~~e~l~h 282 (484)
T 3nyv_A 248 LP--QWK----KVSESAKDLIRKMLTYVPSMRISARDALDH 282 (484)
T ss_dssp SG--GGG----GSCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred Cc--ccc----cCCHHHHHHHHHHCCCChhHCcCHHHHhhC
Confidence 00 001 123468899999999999999999999863
No 200
>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...
Probab=100.00 E-value=3.4e-39 Score=326.29 Aligned_cols=256 Identities=20% Similarity=0.293 Sum_probs=196.7
Q ss_pred HHHHhhcccCCCCceEEEEEEE-cCCcEEEEEEccCccchhHHHHHHHHHHHhhcC-CCCccceeeEEEe--cCeeEEEE
Q 008707 235 ATNNFCKKIGKGSFGSVYYGKM-KDGKEVAVKIMADSCSHRTQQFVTEVALLSRIH-HRNLVPLIGYCEE--EHQRILVY 310 (557)
Q Consensus 235 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~il~~l~-h~nIv~~~~~~~~--~~~~~lv~ 310 (557)
..|++.+.||+|+||.||+|.. .+++.||+|++... ..+.+.+|+++++.++ ||||+++++++.+ ....++||
T Consensus 36 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~lv~ 112 (330)
T 3nsz_A 36 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPV---KKKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALVF 112 (330)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSC---CHHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCCEEEEE
T ss_pred CceEEEEEecccCCeEEEEEEECCCCcEEEEEEeccc---chHHHHHHHHHHHHcCCCCCEEEeeeeeccCCCCceEEEE
Confidence 3456789999999999999986 46899999998743 3467889999999997 9999999999987 66789999
Q ss_pred EecCCCChhhhhhccCCCCCcCHHHHHHHHHHHHHHHHHHHcCCCCCeEeeccCCCCEEeCCCC-cEEEecccCccccCC
Q 008707 311 EYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINM-RAKVSDFGLSRQAEE 389 (557)
Q Consensus 311 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~dlk~~NIll~~~~-~~kl~Dfgla~~~~~ 389 (557)
||+.+++|.+++. .+++..+..++.|++.||+|||+ .+|+||||||+|||++.++ .+||+|||++.....
T Consensus 113 e~~~~~~l~~~~~------~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~ 183 (330)
T 3nsz_A 113 EHVNNTDFKQLYQ------TLTDYDIRFYMYEILKALDYCHS---MGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHP 183 (330)
T ss_dssp ECCCCCCHHHHGG------GCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEEETTTTEEEECCCTTCEECCT
T ss_pred eccCchhHHHHHH------hCCHHHHHHHHHHHHHHHHHHHh---CCeeeCCCCHHHEEEcCCCCEEEEEeCCCceEcCC
Confidence 9999999999875 27888999999999999999998 9999999999999999776 899999999987654
Q ss_pred CCccccccccCCCCccCCcccCC-CCCCcccceehhHHHHHHHHhCCCCCCCCCccccccHHHHHH--------HHHhcC
Q 008707 390 DLTHISSVARGTVGYLDPEYYGN-QQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWAR--------SMIKKG 460 (557)
Q Consensus 390 ~~~~~~~~~~g~~~y~aPE~l~~-~~~s~~~DvwslG~ll~elltg~~pf~~~~~~~~~~~~~~~~--------~~~~~~ 460 (557)
... .....|++.|+|||.+.+ ..++.++|||||||++|+|++|+.||....... ..+..... ..+...
T Consensus 184 ~~~--~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~p~~~~~~~~-~~l~~~~~~~~~~~~~~~~~~~ 260 (330)
T 3nsz_A 184 GQE--YNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNY-DQLVRIAKVLGTEDLYDYIDKY 260 (330)
T ss_dssp TCC--CCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHH-HHHHHHHHHHCHHHHHHHHHHT
T ss_pred CCc--cccccccccccChhhhcCCCcCCchhhHHHHHHHHHHHHhCCCCcccCCchH-HHHHHHHHhcCCchhhhHHHHh
Confidence 332 223458999999999877 678999999999999999999999995332211 11111100 111111
Q ss_pred Ccc--------------ccccccccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 008707 461 DVI--------------SIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 505 (557)
Q Consensus 461 ~~~--------------~~~d~~l~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~evl~ 505 (557)
... ..................+.+++.+||+.||++|||++|+++
T Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~e~l~ 319 (330)
T 3nsz_A 261 NIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAME 319 (330)
T ss_dssp TCCCCTHHHHHHCCCCCCCGGGGCCTTTGGGCCHHHHHHHHTTSCSSGGGSCCHHHHHT
T ss_pred ccccccchhhhhhhccccchhhhccccccccCCHHHHHHHHHHhcCCcccCCCHHHHhc
Confidence 000 000000011111113457889999999999999999999986
No 201
>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*
Probab=100.00 E-value=5.9e-39 Score=336.68 Aligned_cols=197 Identities=25% Similarity=0.352 Sum_probs=164.5
Q ss_pred HHHhhcccCCCCceEEEEEEEc-CCcEEEEEEccCcc--chhHHHHHHHHHHHhhcCCCCccceeeEEEec-----CeeE
Q 008707 236 TNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSC--SHRTQQFVTEVALLSRIHHRNLVPLIGYCEEE-----HQRI 307 (557)
Q Consensus 236 ~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~-----~~~~ 307 (557)
.|++.+.||+|+||.||+|.+. +++.||||++.... ....+.+.+|+++++.++||||+++++++... ...+
T Consensus 27 ~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~~~ 106 (432)
T 3n9x_A 27 NYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLYDLIIPDDLLKFDELY 106 (432)
T ss_dssp TEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSTTTSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCCEE
T ss_pred CEEEEEEEeecCCEEEEEEEECCCCcEEEEEEeCchhcChHHHHHHHHHHHHHHHcCCCCcceEEEEEecCCCCcCCeEE
Confidence 4556799999999999999876 57899999987532 33456789999999999999999999998765 5689
Q ss_pred EEEEecCCCChhhhhhccCCCCCcCHHHHHHHHHHHHHHHHHHHcCCCCCeEeeccCCCCEEeCCCCcEEEecccCcccc
Q 008707 308 LVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQA 387 (557)
Q Consensus 308 lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfgla~~~ 387 (557)
+||||+. ++|.+++.. ...+++..+..++.||+.||+|||+ .+|+||||||+|||++.++.+||+|||+++..
T Consensus 107 lv~e~~~-~~L~~~~~~---~~~l~~~~~~~i~~qil~aL~~LH~---~givHrDlkp~NILl~~~~~~kL~DFGla~~~ 179 (432)
T 3n9x_A 107 IVLEIAD-SDLKKLFKT---PIFLTEEHIKTILYNLLLGENFIHE---SGIIHRDLKPANCLLNQDCSVKVCDFGLARTI 179 (432)
T ss_dssp EEEECCS-EEHHHHHHS---SCCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTCCEEECCCTTCEEC
T ss_pred EEEecCC-cCHHHHHhc---cCCCCHHHHHHHHHHHHHHHHHHHH---CCCCCCCCCHHHeEECCCCCEEEccCCCcccc
Confidence 9999985 699999873 4669999999999999999999999 99999999999999999999999999999876
Q ss_pred CCCCcc---------------------ccccccCCCCccCCccc-CCCCCCcccceehhHHHHHHHHhCCCCCC
Q 008707 388 EEDLTH---------------------ISSVARGTVGYLDPEYY-GNQQLTEKSDVYSFGVVLLELISGKKPVS 439 (557)
Q Consensus 388 ~~~~~~---------------------~~~~~~g~~~y~aPE~l-~~~~~s~~~DvwslG~ll~elltg~~pf~ 439 (557)
...... ......||+.|+|||++ ....++.++||||+||++|||++|..||.
T Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~DiwSlG~il~ell~g~~p~~ 253 (432)
T 3n9x_A 180 NSEKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQSHI 253 (432)
T ss_dssp -------------------------------CCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHTTCTTTC
T ss_pred cccccccccccccccccccccccchhccccCCCCCccccCHHHHhcCCCCCcccccchHHHHHHHHHhcccccc
Confidence 433211 12345689999999986 56679999999999999999998655554
No 202
>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A
Probab=100.00 E-value=9.9e-41 Score=344.10 Aligned_cols=246 Identities=15% Similarity=0.147 Sum_probs=188.4
Q ss_pred HHhhcccCCCCceEEEEEEEc-CCcEEEEEEccCc---cchhHHHHHHHHHH---HhhcCCCCcccee-------eEEEe
Q 008707 237 NNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADS---CSHRTQQFVTEVAL---LSRIHHRNLVPLI-------GYCEE 302 (557)
Q Consensus 237 ~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~i---l~~l~h~nIv~~~-------~~~~~ 302 (557)
|++.+.||+|+||.||+|.+. +|+.||||++... .....+.+.+|+++ ++.++||||++++ +++.+
T Consensus 75 y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~hpniv~~~~~~~~~~~~~~~ 154 (377)
T 3byv_A 75 LVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDLVKD 154 (377)
T ss_dssp EEEEEEEEEETTEEEEEEEC-CCCCEEEEEEEEECC-CCTTHHHHHHHHHHGGGGSTTCCSHHHHHHHHCBCCCSEEEEC
T ss_pred EEEcceeecCCCEEEEEEEECCCCcEEEEEEEeeccccchHHHHHHHHHHHHHHhccccCCHHHHHHHhhhhhhhhhhhc
Confidence 345789999999999999864 6899999998632 33455788999954 5555799999998 66655
Q ss_pred cC-----------------eeEEEEEecCCCChhhhhhccC----CCCCcCHHHHHHHHHHHHHHHHHHHcCCCCCeEee
Q 008707 303 EH-----------------QRILVYEYMHNGTLRDRLHGSV----NQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHR 361 (557)
Q Consensus 303 ~~-----------------~~~lv~e~~~~gsL~~~l~~~~----~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~ 361 (557)
.+ ..++||||+ +|+|.+++.... ....+++..++.++.||+.||+|||+ .+|+||
T Consensus 155 ~~~~~~~~~~~~~~~~~i~~~~lv~E~~-~g~L~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~---~~ivHr 230 (377)
T 3byv_A 155 PQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHH---YGLVHT 230 (377)
T ss_dssp TTSCSEEEC------CEEESEEEEEECC-SEEHHHHHHHHHHTTTTTHHHHHHHHHHHHHHHHHHHHHHHH---TTEECS
T ss_pred cCCccccccccCCCceEEEEEEEEEecc-CCCHHHHHHhccccccccccccHHHHHHHHHHHHHHHHHHHh---CCeecC
Confidence 43 278999999 689999997531 12234468888999999999999999 999999
Q ss_pred ccCCCCEEeCCCCcEEEecccCccccCCCCccccccccCCCCccCCcccCCC-----------CCCcccceehhHHHHHH
Q 008707 362 DVKSSNILLDINMRAKVSDFGLSRQAEEDLTHISSVARGTVGYLDPEYYGNQ-----------QLTEKSDVYSFGVVLLE 430 (557)
Q Consensus 362 dlk~~NIll~~~~~~kl~Dfgla~~~~~~~~~~~~~~~g~~~y~aPE~l~~~-----------~~s~~~DvwslG~ll~e 430 (557)
||||+|||++.++.+||+|||+++..... .....| +.|+|||++.+. .++.++|||||||++||
T Consensus 231 Dikp~NIll~~~~~~kL~DFG~a~~~~~~----~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DvwSlG~il~e 305 (377)
T 3byv_A 231 YLRPVDIVLDQRGGVFLTGFEHLVRDGAR----VVSSVS-RGFEPPELEARRATISYHRDRRTLMTFSFDAWALGLVIYW 305 (377)
T ss_dssp CCCGGGEEECTTCCEEECCGGGCEETTCE----EECCCC-TTCCCHHHHHHHTSTHHHHCCEEECCHHHHHHHHHHHHHH
T ss_pred CCCHHHEEEcCCCCEEEEechhheecCCc----ccCCCC-cCccChhhhcccccccccccccccCChhhhHHHHHHHHHH
Confidence 99999999999999999999999864331 223457 999999999877 89999999999999999
Q ss_pred HHhCCCCCCCCCccccccHHHHHHHHHhcCCccccccccccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH--HHH
Q 008707 431 LISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL--AIQ 508 (557)
Q Consensus 431 lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~evl~--~L~ 508 (557)
|++|+.||.......... .... ..... +..+.+++.+||+.||++|||+.|+++ .++
T Consensus 306 lltg~~Pf~~~~~~~~~~---------------~~~~--~~~~~----~~~~~~li~~~L~~dp~~Rpt~~e~l~hp~f~ 364 (377)
T 3byv_A 306 IWCADLPITKDAALGGSE---------------WIFR--SCKNI----PQPVRALLEGFLRYPKEDRLLPLQAMETPEYE 364 (377)
T ss_dssp HHHSSCCC------CCSG---------------GGGS--SCCCC----CHHHHHHHHHHTCSSGGGCCCHHHHHTSHHHH
T ss_pred HHHCCCCCcccccccchh---------------hhhh--hccCC----CHHHHHHHHHHcCCCchhCCCHHHHhhChHHH
Confidence 999999997433221110 0000 00112 246889999999999999999999996 455
Q ss_pred hhhh
Q 008707 509 DSIK 512 (557)
Q Consensus 509 ~~~~ 512 (557)
++..
T Consensus 365 ~~~~ 368 (377)
T 3byv_A 365 QLRT 368 (377)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 5443
No 203
>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*
Probab=100.00 E-value=6.8e-40 Score=327.01 Aligned_cols=256 Identities=24% Similarity=0.337 Sum_probs=183.4
Q ss_pred HHHhhcccCCCCceEEEEEEEc-CCcEEEEEEccCcc-chhHHHHHHHHHHHhhcCCCCccceeeEEEecCeeEEEEEec
Q 008707 236 TNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSC-SHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYEYM 313 (557)
Q Consensus 236 ~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~lv~e~~ 313 (557)
.|++.+.||+|+||.||+|... +++.||+|++.... ....+.+.+|+++++.++||||+++++++...+..++||||+
T Consensus 16 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 95 (303)
T 2vwi_A 16 DYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVMKLL 95 (303)
T ss_dssp CCEEEEECC---CCCEEEEEC----CEEEEECCC----------------CCCCCCCTTBCCEEEEEESSSCEEEEEECC
T ss_pred hhhhhheeccccceEEEEEEECCCCcEEEEEEEEhhhcchhHHHHHHHHHHHhhcCCCCEeeEEEEEeecCCcEEEehhc
Confidence 4456789999999999999864 68999999886432 234567889999999999999999999999999999999999
Q ss_pred CCCChhhhhhcc-----CCCCCcCHHHHHHHHHHHHHHHHHHHcCCCCCeEeeccCCCCEEeCCCCcEEEecccCccccC
Q 008707 314 HNGTLRDRLHGS-----VNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAE 388 (557)
Q Consensus 314 ~~gsL~~~l~~~-----~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfgla~~~~ 388 (557)
++++|.+++... .....+++..++.++.||+.||+|||+ .+++||||||+||+++.++.+||+|||++....
T Consensus 96 ~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~---~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~ 172 (303)
T 2vwi_A 96 SGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHK---NGQIHRDVKAGNILLGEDGSVQIADFGVSAFLA 172 (303)
T ss_dssp TTCBHHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCSGGGEEECTTCCEEECCCHHHHHCC
T ss_pred cCCchHHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHh---CCCCCCCCChhhEEEcCCCCEEEEeccchheec
Confidence 999999988642 124568999999999999999999998 999999999999999999999999999987654
Q ss_pred CCCc----cccccccCCCCccCCcccCC-CCCCcccceehhHHHHHHHHhCCCCCCCCCccccccHHHHHHHHHhcCCcc
Q 008707 389 EDLT----HISSVARGTVGYLDPEYYGN-QQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVI 463 (557)
Q Consensus 389 ~~~~----~~~~~~~g~~~y~aPE~l~~-~~~s~~~DvwslG~ll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 463 (557)
.... .......|++.|+|||.+.+ ..++.++||||||+++|+|++|+.||........ . ..... +...
T Consensus 173 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~---~---~~~~~-~~~~ 245 (303)
T 2vwi_A 173 TGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKV---L---MLTLQ-NDPP 245 (303)
T ss_dssp ---------------CCCTTCCHHHHHHHHCCCTHHHHHHHHHHHHHHHHSSCTTTTSCGGGH---H---HHHHT-SSCC
T ss_pred cCCCccchhhhcccCCCccccCHHHhccccCCCchhhHHHHHHHHHHHHhCCCCCccCchhhH---H---HHHhc-cCCC
Confidence 3211 11223458999999999865 4688999999999999999999999975433221 1 11111 1111
Q ss_pred cc----ccccccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 008707 464 SI----VDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 505 (557)
Q Consensus 464 ~~----~d~~l~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~evl~ 505 (557)
.. .++.....+ +..+.+++.+||+.||++|||+.|+++
T Consensus 246 ~~~~~~~~~~~~~~~----~~~~~~li~~~l~~dp~~Rps~~~ll~ 287 (303)
T 2vwi_A 246 SLETGVQDKEMLKKY----GKSFRKMISLCLQKDPEKRPTAAELLR 287 (303)
T ss_dssp CTTC-----CCCCCC----CHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred ccccccccchhhhhh----hHHHHHHHHHHccCChhhCcCHHHHhh
Confidence 11 111111222 346889999999999999999999986
No 204
>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...
Probab=100.00 E-value=7.3e-39 Score=319.10 Aligned_cols=260 Identities=20% Similarity=0.298 Sum_probs=197.3
Q ss_pred HHhhcccCCCCceEEEEEEEc-CCcEEEEEEccCccc--hhHHHHHHHHHHHhhcCCCCccceeeEEEecCeeEEEEEec
Q 008707 237 NNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCS--HRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYEYM 313 (557)
Q Consensus 237 ~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~lv~e~~ 313 (557)
|++.+.||+|+||.||+|... +|+.||+|++..... ...+.+.+|++++++++||||+++++++...+..++||||+
T Consensus 5 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 84 (299)
T 2r3i_A 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFL 84 (299)
T ss_dssp EEEEEEEEECSSSEEEEEEETTTCCEEEEEEC--------CCHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred hhhhhhhccCCCeeEEEEEEcCCCceEEEEEeecCccchhhHHHHHHHHHHHHHcCCCCeeeEEEEEecCCceEEEEEcc
Confidence 345789999999999999876 689999999865322 23367889999999999999999999999999999999999
Q ss_pred CCCChhhhhhccCCCCCcCHHHHHHHHHHHHHHHHHHHcCCCCCeEeeccCCCCEEeCCCCcEEEecccCccccCCCCcc
Q 008707 314 HNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEEDLTH 393 (557)
Q Consensus 314 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfgla~~~~~~~~~ 393 (557)
. ++|.+++... ....+++..+..++.|++.||+|||+ .|++||||||+||+++.++.+||+|||++.........
T Consensus 85 ~-~~L~~~~~~~-~~~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~~~ 159 (299)
T 2r3i_A 85 H-QDLKKFMDAS-ALTGIPLPLIKSYLFQLLQGLAFCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRT 159 (299)
T ss_dssp S-EEHHHHHHHT-TTTCCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTSCEEECSTTHHHHHCCCSBC
T ss_pred c-CCHHHHHHhh-hccCCCHHHHHHHHHHHHHHHHHHHH---CCccCCCCCHHHeEEcCCCCEEECcchhhhhccCCccc
Confidence 7 6999988754 23568899999999999999999998 99999999999999999999999999999876433222
Q ss_pred ccccccCCCCccCCcccCCCC-CCcccceehhHHHHHHHHhCCCCCCCCCccccccHHHHHHHHHhcCCcc--------c
Q 008707 394 ISSVARGTVGYLDPEYYGNQQ-LTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVI--------S 464 (557)
Q Consensus 394 ~~~~~~g~~~y~aPE~l~~~~-~s~~~DvwslG~ll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~--------~ 464 (557)
.....+++.|+|||.+.+.. ++.++||||||+++|+|++|+.||...+..+ .+.... ......... .
T Consensus 160 -~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~--~~~~~~-~~~~~~~~~~~~~~~~~~ 235 (299)
T 2r3i_A 160 -YTHEVVTLWYRAPEILLGAKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEID--QLFRIF-RTLGTPDEVVWPGVTSMP 235 (299)
T ss_dssp -TTSCBCCCTTCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH--HHHHHH-HHHCCCCTTTSTTGGGST
T ss_pred -cCcccccccccCcHHhhccccCChHHHHHHHHHHHHHHHhCCCCCCCccHHH--HHHHHH-HHhCCCchhhhhHhhcCc
Confidence 22334799999999998765 7899999999999999999999998543221 111111 111110000 0
Q ss_pred cccccccC----CC---CHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 008707 465 IVDPVLIG----NV---KIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 505 (557)
Q Consensus 465 ~~d~~l~~----~~---~~~~~~~l~~li~~cl~~~P~~RPt~~evl~ 505 (557)
.+.+.+.. .. .......+.+++.+||+.||++|||+.|+++
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~~~l~ 283 (299)
T 2r3i_A 236 DYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 283 (299)
T ss_dssp TCCTTSCCCCCCCHHHHSTTCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred ccchhhhcccchhhHhhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhc
Confidence 00000000 00 0112347889999999999999999999986
No 205
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=100.00 E-value=2.5e-39 Score=356.46 Aligned_cols=246 Identities=25% Similarity=0.330 Sum_probs=201.3
Q ss_pred HHHhhcccCCCCceEEEEEEEc-CCcEEEEEEccCcc---chhHHHHHHHHHHHhhc-CCCCccceeeEEEecCeeEEEE
Q 008707 236 TNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSC---SHRTQQFVTEVALLSRI-HHRNLVPLIGYCEEEHQRILVY 310 (557)
Q Consensus 236 ~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~il~~l-~h~nIv~~~~~~~~~~~~~lv~ 310 (557)
.|++.+.||+|+||.||+|... +++.||||++.+.. ....+.+..|..++..+ +||+|+.+++++.+.+..++||
T Consensus 342 ~f~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~l~~~~~~~~~~~lV~ 421 (674)
T 3pfq_A 342 DFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVM 421 (674)
T ss_dssp TEEEEEESSBTTTBCEEEEEESSSCCEEEEEEEEHHHHHHTTTTHHHHHHHHHHTCTTCCTTBCCEEEECBCSSEEEEEE
T ss_pred ceEEEEEEccCCCEEEEEEEECCCCcEEEEEEEeccccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEEEeCCEEEEEE
Confidence 3556789999999999999876 57889999987531 23446788899999988 7999999999999999999999
Q ss_pred EecCCCChhhhhhccCCCCCcCHHHHHHHHHHHHHHHHHHHcCCCCCeEeeccCCCCEEeCCCCcEEEecccCccccCCC
Q 008707 311 EYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEED 390 (557)
Q Consensus 311 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfgla~~~~~~ 390 (557)
||+++|+|.+++.. ...+++..++.++.||+.||+|||+ .+|+||||||+|||++.++.+||+|||+++.....
T Consensus 422 E~~~gg~L~~~l~~---~~~~~~~~~~~~~~qi~~aL~~LH~---~gIiHrDLKp~NILl~~~g~ikL~DFGla~~~~~~ 495 (674)
T 3pfq_A 422 EYVNGGDLMYHIQQ---VGRFKEPHAVFYAAEIAIGLFFLQS---KGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWD 495 (674)
T ss_dssp ECCCSCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHH---TSEECCCCCSTTEEECSSSCEEECCCTTCEECCCT
T ss_pred eCcCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHh---CCeEeccCChhhEEEcCCCcEEEeecceeeccccC
Confidence 99999999999984 3568999999999999999999998 99999999999999999999999999999864332
Q ss_pred CccccccccCCCCccCCcccCCCCCCcccceehhHHHHHHHHhCCCCCCCCCccccccHHHHHHHHHhcCCccccccccc
Q 008707 391 LTHISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPVL 470 (557)
Q Consensus 391 ~~~~~~~~~g~~~y~aPE~l~~~~~s~~~DvwslG~ll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l 470 (557)
.. ......||+.|+|||++.+..++.++||||||+++|||++|+.||.+.+.. +... .+..+..
T Consensus 496 ~~-~~~~~~GT~~Y~APE~l~~~~~~~~~DvwSlGvilyelltG~~Pf~~~~~~------~~~~-~i~~~~~-------- 559 (674)
T 3pfq_A 496 GV-TTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDED------ELFQ-SIMEHNV-------- 559 (674)
T ss_dssp TC-CBCCCCSCSSSCCHHHHTCCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSHH------HHHH-HHHSSCC--------
T ss_pred Cc-ccccccCCCcccCHhhhcCCCCCccceEechHHHHHHHHcCCCCCCCCCHH------HHHH-HHHhCCC--------
Confidence 22 234456999999999999999999999999999999999999999854321 1111 2222211
Q ss_pred cCCCCHHHHHHHHHHHHHccccCCCCCCCH-----HHHHH
Q 008707 471 IGNVKIESIWRIAEVAIQCVEQRGFSRPKM-----QEIVL 505 (557)
Q Consensus 471 ~~~~~~~~~~~l~~li~~cl~~~P~~RPt~-----~evl~ 505 (557)
.++.....++.+++.+||+.||++||++ +||++
T Consensus 560 --~~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~ei~~ 597 (674)
T 3pfq_A 560 --AYPKSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKE 597 (674)
T ss_dssp --CCCTTSCHHHHHHHHHHSCSSSTTCTTCSTTHHHHHHS
T ss_pred --CCCccCCHHHHHHHHHHccCCHHHCCCCCCCcHHHHhc
Confidence 1111223478899999999999999998 66654
No 206
>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*
Probab=100.00 E-value=2e-39 Score=356.22 Aligned_cols=259 Identities=25% Similarity=0.391 Sum_probs=206.1
Q ss_pred HHHHHhhcccCCCCceEEEEEEEcC----CcEEEEEEccCcc-chhHHHHHHHHHHHhhcCCCCccceeeEEEecCeeEE
Q 008707 234 EATNNFCKKIGKGSFGSVYYGKMKD----GKEVAVKIMADSC-SHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRIL 308 (557)
Q Consensus 234 ~~~~~~~~~lG~G~~g~Vy~~~~~~----~~~vavK~~~~~~-~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~l 308 (557)
...+++.+.||+|+||.||+|.+.. +..||+|.+.... ....+.+.+|+.+++.++||||+++++++. ++..++
T Consensus 389 ~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~-~~~~~l 467 (656)
T 2j0j_A 389 RERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENPVWI 467 (656)
T ss_dssp GGGEEEEEEEECCSSCCEEEEEECCSSSCCEEEEEEECSSTTCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC-SSSCEE
T ss_pred cccEEEeeEEeeCCCEEEEEEEEecCCCccEEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEe-cCceEE
Confidence 3456678899999999999998753 4579999987543 334567999999999999999999999985 456899
Q ss_pred EEEecCCCChhhhhhccCCCCCcCHHHHHHHHHHHHHHHHHHHcCCCCCeEeeccCCCCEEeCCCCcEEEecccCccccC
Q 008707 309 VYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAE 388 (557)
Q Consensus 309 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfgla~~~~ 388 (557)
||||+++|+|.+++... ...+++..++.++.|++.||+|||+ ++|+||||||+|||++.++.+||+|||++....
T Consensus 468 v~E~~~~g~L~~~l~~~--~~~l~~~~~~~i~~qi~~aL~~LH~---~givHrDikp~NILl~~~~~vkL~DFG~a~~~~ 542 (656)
T 2j0j_A 468 IMELCTLGELRSFLQVR--KFSLDLASLILYAYQLSTALAYLES---KRFVHRDIAARNVLVSSNDCVKLGDFGLSRYME 542 (656)
T ss_dssp EEECCTTCBHHHHHHHT--TTTCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEEEETTEEEECCCCCCCSCC
T ss_pred EEEcCCCCcHHHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHHh---CCccccccchHhEEEeCCCCEEEEecCCCeecC
Confidence 99999999999999753 4568999999999999999999998 999999999999999999999999999998765
Q ss_pred CCCccccccccCCCCccCCcccCCCCCCcccceehhHHHHHHHHh-CCCCCCCCCccccccHHHHHHHHHhcCCcccccc
Q 008707 389 EDLTHISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELIS-GKKPVSVEDFGAELNIVHWARSMIKKGDVISIVD 467 (557)
Q Consensus 389 ~~~~~~~~~~~g~~~y~aPE~l~~~~~s~~~DvwslG~ll~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 467 (557)
...........+++.|+|||.+.+..++.++||||||+++|||++ |..||.+....+ . ...+..+....
T Consensus 543 ~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~~---~----~~~i~~~~~~~--- 612 (656)
T 2j0j_A 543 DSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNND---V----IGRIENGERLP--- 612 (656)
T ss_dssp C----------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHH---H----HHHHHHTCCCC---
T ss_pred CCcceeccCCCCCcceeCHHHhcCCCCCchhhHHHHHHHHHHHHHcCCCCCCCCCHHH---H----HHHHHcCCCCC---
Confidence 443333333446789999999998899999999999999999997 999997443221 1 11222222111
Q ss_pred ccccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhhhhh
Q 008707 468 PVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKIE 514 (557)
Q Consensus 468 ~~l~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~evl~~L~~~~~~~ 514 (557)
.+...+..+.+++.+||+.||++|||+.||++.|+++.+.+
T Consensus 613 ------~~~~~~~~l~~li~~~l~~dP~~RPs~~el~~~L~~il~~~ 653 (656)
T 2j0j_A 613 ------MPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTILEEE 653 (656)
T ss_dssp ------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred ------CCccccHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHHHh
Confidence 11122347889999999999999999999999999987654
No 207
>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*
Probab=100.00 E-value=3.4e-39 Score=325.31 Aligned_cols=254 Identities=25% Similarity=0.334 Sum_probs=197.6
Q ss_pred HHHHHHHHhhcccCCCCceEEEEEEEc-CCcEEEEEEccCccc--------hhHHHHHHHHHHHhhcCCCCccceeeEEE
Q 008707 231 ELEEATNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCS--------HRTQQFVTEVALLSRIHHRNLVPLIGYCE 301 (557)
Q Consensus 231 ~~~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--------~~~~~~~~E~~il~~l~h~nIv~~~~~~~ 301 (557)
......|.+.+.||+|+||.||+|... +++.||||++..... .....+.+|+++++.++||||+++++++.
T Consensus 6 ~~l~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~ 85 (322)
T 2ycf_A 6 KALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFD 85 (322)
T ss_dssp HHHHHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECC---------------CHHHHHHHHHHCCCTTBCCEEEEEE
T ss_pred hhhhhceeEeeEEecCCCEEEEEEEEcCCCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhCCCCCCceEeeEEc
Confidence 344567788999999999999999876 578999999864321 12245889999999999999999999987
Q ss_pred ecCeeEEEEEecCCCChhhhhhccCCCCCcCHHHHHHHHHHHHHHHHHHHcCCCCCeEeeccCCCCEEeCCCCc---EEE
Q 008707 302 EEHQRILVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMR---AKV 378 (557)
Q Consensus 302 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~dlk~~NIll~~~~~---~kl 378 (557)
... .++||||+++++|.+++. ....+++..+..++.||+.||+|||+ ++++||||||+||+++.++. +||
T Consensus 86 ~~~-~~lv~e~~~~~~L~~~~~---~~~~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~dlkp~NIl~~~~~~~~~~kl 158 (322)
T 2ycf_A 86 AED-YYIVLELMEGGELFDKVV---GNKRLKEATCKLYFYQMLLAVQYLHE---NGIIHRDLKPENVLLSSQEEDCLIKI 158 (322)
T ss_dssp SSS-EEEEEECCTTEETHHHHS---TTCCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEESSSSSSCCEEE
T ss_pred CCc-eEEEEecCCCCcHHHHHh---ccCCCCHHHHHHHHHHHHHHHHHHHH---CCeeccCCCHHHEEEecCCCCCeEEE
Confidence 655 899999999999999887 34678999999999999999999998 99999999999999987654 999
Q ss_pred ecccCccccCCCCccccccccCCCCccCCcccC---CCCCCcccceehhHHHHHHHHhCCCCCCCCCccccccHHHHHHH
Q 008707 379 SDFGLSRQAEEDLTHISSVARGTVGYLDPEYYG---NQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARS 455 (557)
Q Consensus 379 ~Dfgla~~~~~~~~~~~~~~~g~~~y~aPE~l~---~~~~s~~~DvwslG~ll~elltg~~pf~~~~~~~~~~~~~~~~~ 455 (557)
+|||++........ .....|++.|+|||.+. ...++.++||||||+++|+|++|..||....... .+..
T Consensus 159 ~Dfg~~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~--~~~~---- 230 (322)
T 2ycf_A 159 TDFGHSKILGETSL--MRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQV--SLKD---- 230 (322)
T ss_dssp CCCTTCEECCCCHH--HHHHHSCCTTCCHHHHHHTTTTTCTTHHHHHHHHHHHHHHHHSSCSSCSTTCSS--CHHH----
T ss_pred ccCccceecccccc--cccccCCcCccCchhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchHH--HHHH----
Confidence 99999987654321 22345899999999973 5678899999999999999999999997443221 2222
Q ss_pred HHhcCCccccccccccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 008707 456 MIKKGDVISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 505 (557)
Q Consensus 456 ~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~evl~ 505 (557)
.+..+.... .+..... .+..+.+++.+||+.||++|||+.|+++
T Consensus 231 ~~~~~~~~~--~~~~~~~----~~~~~~~li~~~l~~dP~~Rps~~~~l~ 274 (322)
T 2ycf_A 231 QITSGKYNF--IPEVWAE----VSEKALDLVKKLLVVDPKARFTTEEALR 274 (322)
T ss_dssp HHHHTCCCC--CHHHHTT----SCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred HHHhCcccc--Cchhhhh----cCHHHHHHHHHHcccCHhhCCCHHHHhh
Confidence 122222110 0011111 2347889999999999999999999985
No 208
>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A
Probab=100.00 E-value=2.2e-39 Score=321.27 Aligned_cols=250 Identities=21% Similarity=0.308 Sum_probs=184.6
Q ss_pred HHHhhcccCCCCceEEEEEEEc-CCcEEEEEEccCccc-h-hHHHHHHHHHHHhhcCCCCccceeeEEEecCeeEEEEEe
Q 008707 236 TNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCS-H-RTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYEY 312 (557)
Q Consensus 236 ~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~-~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~lv~e~ 312 (557)
.|++.+.||+|+||.||+|... +|+.||+|++..... . ..+.+.++...++.++||||+++++++.+.+..++||||
T Consensus 8 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~iv~~~~~~~~~~~~~lv~e~ 87 (290)
T 3fme_A 8 DLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWICMEL 87 (290)
T ss_dssp GEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEC---CHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSSEEEEEEC
T ss_pred hhhhHHhcCCCCCeEEEEEEecCCCeEEEEEEeecccCcHHHHHHHHHHHHHHHhCCCCeEEEEeeeeeccCCEEEEEeh
Confidence 4556789999999999999874 689999999875422 2 223444555568888999999999999999999999999
Q ss_pred cCCCChhhhhhccC-CCCCcCHHHHHHHHHHHHHHHHHHHcCCCC-CeEeeccCCCCEEeCCCCcEEEecccCccccCCC
Q 008707 313 MHNGTLRDRLHGSV-NQKPLDWLTRLQIAHDAAKGLEYLHTGCNP-GIIHRDVKSSNILLDINMRAKVSDFGLSRQAEED 390 (557)
Q Consensus 313 ~~~gsL~~~l~~~~-~~~~l~~~~~~~i~~qia~aL~~LH~~~~~-~ivH~dlk~~NIll~~~~~~kl~Dfgla~~~~~~ 390 (557)
++ |+|.+++.... ....+++..++.++.|++.||+|||+ + +++||||||+||+++.++.+||+|||++......
T Consensus 88 ~~-~~l~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~---~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 163 (290)
T 3fme_A 88 MD-TSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHS---KLSVIHRDVKPSNVLINALGQVKMCDFGISGYLVDD 163 (290)
T ss_dssp CS-EEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHH---HSCCCCCCCSGGGCEECTTCCEEBCCC---------
T ss_pred hc-cchHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhh---cCCeecCCCCHHHEEECCCCCEEEeecCCccccccc
Confidence 96 58877765421 35679999999999999999999998 7 9999999999999999999999999999876543
Q ss_pred CccccccccCCCCccCCccc----CCCCCCcccceehhHHHHHHHHhCCCCCCCCCccccccHHHHHHHHHhcCCccccc
Q 008707 391 LTHISSVARGTVGYLDPEYY----GNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIV 466 (557)
Q Consensus 391 ~~~~~~~~~g~~~y~aPE~l----~~~~~s~~~DvwslG~ll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 466 (557)
.. .....||+.|+|||.+ .+..++.++||||+|+++|+|++|+.||...... .............. ..
T Consensus 164 ~~--~~~~~~t~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~-----~~~~~~~~~~~~~~-~~ 235 (290)
T 3fme_A 164 VA--KDIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTP-----FQQLKQVVEEPSPQ-LP 235 (290)
T ss_dssp --------CCCCCCSCHHHHSCCTTC--CCHHHHHHHHHHHHHHHHHTSCSSCCCSCH-----HHHHHHHHHSCCCC-CC
T ss_pred cc--ccccCCCccccChhhcChhhcCcCCCcHHHHHHHHHHHHHHHHCCCCccccCch-----HHHHHHHhccCCCC-cc
Confidence 22 2223589999999996 5667899999999999999999999999743221 11122222221111 10
Q ss_pred cccccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 008707 467 DPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 505 (557)
Q Consensus 467 d~~l~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~evl~ 505 (557)
....+..+.+++.+||+.||++|||++|+++
T Consensus 236 --------~~~~~~~~~~li~~~l~~~p~~Rpt~~e~l~ 266 (290)
T 3fme_A 236 --------ADKFSAEFVDFTSQCLKKNSKERPTYPELMQ 266 (290)
T ss_dssp --------TTTSCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred --------cccCCHHHHHHHHHHhhcChhhCcCHHHHHh
Confidence 0112346889999999999999999999987
No 209
>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}
Probab=100.00 E-value=1.5e-39 Score=337.04 Aligned_cols=259 Identities=23% Similarity=0.283 Sum_probs=192.0
Q ss_pred HHHhhcccCCCCceEEEEEEEcCCcEEEEEEccCccchhHHHHHHHHHHHhhcCCCCccceeeEEEecCe------eEEE
Q 008707 236 TNNFCKKIGKGSFGSVYYGKMKDGKEVAVKIMADSCSHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQ------RILV 309 (557)
Q Consensus 236 ~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~------~~lv 309 (557)
.|++.+.||+|+||.||+|.+..+..||+|++..... ...+|+++++.++||||+++++++...+. .++|
T Consensus 41 ~Y~~~~~lG~G~~g~V~~a~~~~~~~~aikk~~~~~~----~~~~E~~il~~l~h~niv~l~~~~~~~~~~~~~~~~~lv 116 (394)
T 4e7w_A 41 AYTNCKVIGNGSFGVVFQAKLVESDEVAIKKVLQDKR----FKNRELQIMRIVKHPNVVDLKAFFYSNGDKKDEVFLNLV 116 (394)
T ss_dssp EEEEEEEEEEETTEEEEEEEETTTEEEEEEEEECCTT----SCCHHHHHHHTCCCTTBCCEEEEEEEESSSSSCEEEEEE
T ss_pred eEEEeEEEeeCCCeEEEEEEECCCCeEEEEEEecCcc----hHHHHHHHHHhCCCCCcceEEEEEEecCCCCCceEEEEE
Confidence 3556799999999999999998777799998764322 12369999999999999999999865433 7899
Q ss_pred EEecCCCChhhhhhccCCCCCcCHHHHHHHHHHHHHHHHHHHcCCCCCeEeeccCCCCEEeC-CCCcEEEecccCccccC
Q 008707 310 YEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLD-INMRAKVSDFGLSRQAE 388 (557)
Q Consensus 310 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~dlk~~NIll~-~~~~~kl~Dfgla~~~~ 388 (557)
|||++++.+............+++..+..++.||+.||+|||+ .+|+||||||+|||++ .++.+||+|||+++...
T Consensus 117 ~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~---~~ivHrDlkp~Nill~~~~~~~kL~DFG~a~~~~ 193 (394)
T 4e7w_A 117 LEYVPETVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIHS---IGICHRDIKPQNLLLDPPSGVLKLIDFGSAKILI 193 (394)
T ss_dssp EECCSEEHHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEEETTTTEEEECCCTTCEECC
T ss_pred eeccCccHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHH---CCccCCCCCHHHEEEcCCCCcEEEeeCCCccccc
Confidence 9999765444333222235678999999999999999999998 9999999999999999 79999999999998764
Q ss_pred CCCccccccccCCCCccCCcccCCC-CCCcccceehhHHHHHHHHhCCCCCCCCCccccccHHHHHHHHHhcC-------
Q 008707 389 EDLTHISSVARGTVGYLDPEYYGNQ-QLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKG------- 460 (557)
Q Consensus 389 ~~~~~~~~~~~g~~~y~aPE~l~~~-~~s~~~DvwslG~ll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~------- 460 (557)
..... ....+|+.|+|||++.+. .++.++||||+||++|||++|+.||.+.+..+. +..... .....
T Consensus 194 ~~~~~--~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~--l~~i~~-~~g~p~~~~~~~ 268 (394)
T 4e7w_A 194 AGEPN--VSYICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGESGIDQ--LVEIIK-VLGTPSREQIKT 268 (394)
T ss_dssp TTCCC--CSSCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH--HHHHHH-HHCCCCHHHHHH
T ss_pred CCCCC--cccccCcCccCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHH--HHHHHH-HhCCCCHHHHHh
Confidence 43222 234579999999998765 589999999999999999999999985543221 111111 11000
Q ss_pred ---CccccccccccC-----CCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 008707 461 ---DVISIVDPVLIG-----NVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLA 506 (557)
Q Consensus 461 ---~~~~~~d~~l~~-----~~~~~~~~~l~~li~~cl~~~P~~RPt~~evl~~ 506 (557)
......-+.... .........+.+++.+||+.||++|||+.|+++.
T Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 322 (394)
T 4e7w_A 269 MNPNYMEHKFPQIRPHPFSKVFRPRTPPDAIDLISRLLEYTPSARLTAIEALCH 322 (394)
T ss_dssp HCGGGSSSCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCCHHHHHTS
T ss_pred hChhhhhhccccccCCcHHHhccccCCHHHHHHHHHHhCCChhhCCCHHHHhcC
Confidence 000000000000 0111233478899999999999999999999874
No 210
>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}
Probab=100.00 E-value=1.3e-38 Score=340.88 Aligned_cols=250 Identities=27% Similarity=0.364 Sum_probs=199.1
Q ss_pred HHHHhhcccCCCCceEEEEEEEc-CCcEEEEEEccCccc-------------hhHHHHHHHHHHHhhcCCCCccceeeEE
Q 008707 235 ATNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCS-------------HRTQQFVTEVALLSRIHHRNLVPLIGYC 300 (557)
Q Consensus 235 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-------------~~~~~~~~E~~il~~l~h~nIv~~~~~~ 300 (557)
..|.+.+.||+|+||+||+|... +++.||+|++..... ...+.+.+|+++++.++||||+++++++
T Consensus 36 ~~Y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~ 115 (504)
T 3q5i_A 36 ESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIKLFDVF 115 (504)
T ss_dssp GTEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEC----------------CTHHHHHHHHHHHHTCCCTTBCCEEEEE
T ss_pred cceEEEeEecccCCeEEEEEEECCCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhCCCCCCCeEEEEE
Confidence 44667899999999999999876 578999999865321 2346788999999999999999999999
Q ss_pred EecCeeEEEEEecCCCChhhhhhccCCCCCcCHHHHHHHHHHHHHHHHHHHcCCCCCeEeeccCCCCEEeCCCC---cEE
Q 008707 301 EEEHQRILVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINM---RAK 377 (557)
Q Consensus 301 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~dlk~~NIll~~~~---~~k 377 (557)
.+....++||||+++|+|.+.+.. ...+++..+..++.||+.||+|||+ .+|+||||||+|||++.++ .+|
T Consensus 116 ~~~~~~~lv~e~~~gg~L~~~l~~---~~~~~~~~~~~i~~qi~~~l~~lH~---~~ivH~Dlkp~Nil~~~~~~~~~~k 189 (504)
T 3q5i_A 116 EDKKYFYLVTEFYEGGELFEQIIN---RHKFDECDAANIMKQILSGICYLHK---HNIVHRDIKPENILLENKNSLLNIK 189 (504)
T ss_dssp ECSSEEEEEEECCTTCBHHHHHHH---HSCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEESSTTCCSSEE
T ss_pred EcCCEEEEEEecCCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHH---CCeEeCCCcHHHEEEecCCCCccEE
Confidence 999999999999999999998874 3568999999999999999999998 9999999999999998776 699
Q ss_pred EecccCccccCCCCccccccccCCCCccCCcccCCCCCCcccceehhHHHHHHHHhCCCCCCCCCccccccHHHHHHHHH
Q 008707 378 VSDFGLSRQAEEDLTHISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMI 457 (557)
Q Consensus 378 l~Dfgla~~~~~~~~~~~~~~~g~~~y~aPE~l~~~~~s~~~DvwslG~ll~elltg~~pf~~~~~~~~~~~~~~~~~~~ 457 (557)
|+|||++........ .....||+.|+|||++.+ .++.++||||+||++|+|++|..||.+.+... ....+
T Consensus 190 l~Dfg~a~~~~~~~~--~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~-------~~~~i 259 (504)
T 3q5i_A 190 IVDFGLSSFFSKDYK--LRDRLGTAYYIAPEVLKK-KYNEKCDVWSCGVIMYILLCGYPPFGGQNDQD-------IIKKV 259 (504)
T ss_dssp ECCCTTCEECCTTSC--BCCCCSCTTTCCHHHHTT-CBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH-------HHHHH
T ss_pred EEECCCCEEcCCCCc--cccccCCcCCCCHHHhcc-CCCchHHHHHHHHHHHHHHhCCCCCCCCCHHH-------HHHHH
Confidence 999999987654322 233458999999999875 68999999999999999999999998543221 11222
Q ss_pred hcCCccccccccccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 008707 458 KKGDVISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLA 506 (557)
Q Consensus 458 ~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~evl~~ 506 (557)
..+.... +...... .+..+.+++.+||+.||.+|||++|+++.
T Consensus 260 ~~~~~~~--~~~~~~~----~s~~~~~li~~~L~~dp~~R~t~~e~l~h 302 (504)
T 3q5i_A 260 EKGKYYF--DFNDWKN----ISDEAKELIKLMLTYDYNKRCTAEEALNS 302 (504)
T ss_dssp HHCCCCC--CHHHHTT----SCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred HcCCCCC--CccccCC----CCHHHHHHHHHHcCCChhHCCCHHHHhcC
Confidence 2232211 0000011 12468899999999999999999999863
No 211
>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*
Probab=100.00 E-value=8.6e-39 Score=334.90 Aligned_cols=199 Identities=26% Similarity=0.324 Sum_probs=171.4
Q ss_pred HHHHhhcccCCCCceEEEEEEEc-CCcEEEEEEccCccchhHHHHHHHHHHHhhc------CCCCccceeeEEEecCeeE
Q 008707 235 ATNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCSHRTQQFVTEVALLSRI------HHRNLVPLIGYCEEEHQRI 307 (557)
Q Consensus 235 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~il~~l------~h~nIv~~~~~~~~~~~~~ 307 (557)
..|++.+.||+|+||.||+|... +++.||||++... ....+.+.+|+++++.+ .|+||+++++++...+..+
T Consensus 97 ~ry~~~~~LG~G~fg~V~~a~~~~~~~~vAvK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~~ 175 (429)
T 3kvw_A 97 YRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNE-KRFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTFRNHIC 175 (429)
T ss_dssp TTEEEEEEEEESSSEEEEEEEETTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHTTCTTSCSCBCCEEEEEEETTEEE
T ss_pred CcEEEEEEcccCccEEEEEEEECCCCcEEEEEEECCc-cchHHHHHHHHHHHHHHhhccccCCcCEEEEEeecccCCeEE
Confidence 34667899999999999999776 5889999998754 33346677899888887 4679999999999999999
Q ss_pred EEEEecCCCChhhhhhccCCCCCcCHHHHHHHHHHHHHHHHHHHcCCCCCeEeeccCCCCEEeCCCCc--EEEecccCcc
Q 008707 308 LVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMR--AKVSDFGLSR 385 (557)
Q Consensus 308 lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~dlk~~NIll~~~~~--~kl~Dfgla~ 385 (557)
+||||+. ++|.+++... ....+++..+..++.||+.||+|||+ .+|+||||||+|||++.++. +||+|||++.
T Consensus 176 lv~e~~~-~~L~~~l~~~-~~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivHrDlKp~NILl~~~~~~~vkL~DFG~a~ 250 (429)
T 3kvw_A 176 MTFELLS-MNLYELIKKN-KFQGFSLPLVRKFAHSILQCLDALHK---NRIIHCDLKPENILLKQQGRSGIKVIDFGSSC 250 (429)
T ss_dssp EEECCCC-CBHHHHHHHT-TTCCCCHHHHHHHHHHHHHHHHHHHH---HTEECSCCSGGGEEESSTTSCCEEECCCTTCE
T ss_pred EEEeccC-CCHHHHHHhc-cCCCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHeEEccCCCcceEEeecccce
Confidence 9999995 6999988754 23458999999999999999999998 89999999999999999887 9999999997
Q ss_pred ccCCCCccccccccCCCCccCCcccCCCCCCcccceehhHHHHHHHHhCCCCCCCCCc
Q 008707 386 QAEEDLTHISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDF 443 (557)
Q Consensus 386 ~~~~~~~~~~~~~~g~~~y~aPE~l~~~~~s~~~DvwslG~ll~elltg~~pf~~~~~ 443 (557)
...... ....||+.|+|||++.+..++.++|||||||++|||+||+.||.+.+.
T Consensus 251 ~~~~~~----~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~~~~~ 304 (429)
T 3kvw_A 251 YEHQRV----YTYIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPGEDE 304 (429)
T ss_dssp ETTCCC----CSSCSCGGGCCHHHHHTBCCCTHHHHHHHHHHHHHHHHSSCSSCCSSH
T ss_pred ecCCcc----cccCCCCCccChHHHhCCCCCchHHHHhHHHHHHHHHhCCCCCCCCCH
Confidence 654332 234589999999999999999999999999999999999999986543
No 212
>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*
Probab=100.00 E-value=5.5e-39 Score=325.43 Aligned_cols=259 Identities=22% Similarity=0.297 Sum_probs=201.8
Q ss_pred HHHHHhhcccCCCCceEEEEEEE-c-CCcEEEEEEccCccchhHHHHHHHHHHHhhcCCC------CccceeeEEEecCe
Q 008707 234 EATNNFCKKIGKGSFGSVYYGKM-K-DGKEVAVKIMADSCSHRTQQFVTEVALLSRIHHR------NLVPLIGYCEEEHQ 305 (557)
Q Consensus 234 ~~~~~~~~~lG~G~~g~Vy~~~~-~-~~~~vavK~~~~~~~~~~~~~~~E~~il~~l~h~------nIv~~~~~~~~~~~ 305 (557)
...|++.+.||+|+||.||+|.. . +++.||+|++... ....+.+.+|+++++.++|+ +++++++++...+.
T Consensus 13 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~~~~~i~~~~~~~~~~~~ 91 (339)
T 1z57_A 13 SARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNV-DRYCEAARSEIQVLEHLNTTDPNSTFRCVQMLEWFEHHGH 91 (339)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSS-HHHHHHHHHHHHHHHHHHHHCTTCTTCBCCEEEEEEETTE
T ss_pred cCceEEEEEEecCCCeEEEEEEecCCCCcEEEEEEEecC-CchhHHHHHHHHHHHHhhhcCCCCceeeEeeecccccCCc
Confidence 34566789999999999999986 3 5889999998754 33456788999999998765 49999999999999
Q ss_pred eEEEEEecCCCChhhhhhccCCCCCcCHHHHHHHHHHHHHHHHHHHcCCCCCeEeeccCCCCEEeCC-------------
Q 008707 306 RILVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDI------------- 372 (557)
Q Consensus 306 ~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~dlk~~NIll~~------------- 372 (557)
.++||||+ +++|.+++... ....+++..+..++.|++.||+|||+ ++++||||||+||+++.
T Consensus 92 ~~lv~e~~-~~~l~~~l~~~-~~~~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~Dlkp~Nil~~~~~~~~~~~~~~~~ 166 (339)
T 1z57_A 92 ICIVFELL-GLSTYDFIKEN-GFLPFRLDHIRKMAYQICKSVNFLHS---NKLTHTDLKPENILFVQSDYTEAYNPKIKR 166 (339)
T ss_dssp EEEEEECC-CCBHHHHHHHT-TTCCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEESCCCEEEEEC----C
T ss_pred EEEEEcCC-CCCHHHHHHhc-CCCCCcHHHHHHHHHHHHHHHHHHHH---CCCcCCCCCHHHEEEeccccccccCCcccc
Confidence 99999999 89999998754 23468899999999999999999998 99999999999999987
Q ss_pred ------CCcEEEecccCccccCCCCccccccccCCCCccCCcccCCCCCCcccceehhHHHHHHHHhCCCCCCCCCcccc
Q 008707 373 ------NMRAKVSDFGLSRQAEEDLTHISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAE 446 (557)
Q Consensus 373 ------~~~~kl~Dfgla~~~~~~~~~~~~~~~g~~~y~aPE~l~~~~~s~~~DvwslG~ll~elltg~~pf~~~~~~~~ 446 (557)
++.+||+|||++....... ....||+.|+|||.+.+..++.++||||||+++|||++|+.||...+....
T Consensus 167 ~~~~~~~~~~kl~Dfg~~~~~~~~~----~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~ 242 (339)
T 1z57_A 167 DERTLINPDIKVVDFGSATYDDEHH----STLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTHDSKEH 242 (339)
T ss_dssp EEEEESCCCEEECCCSSCEETTSCC----CSSCSCGGGCCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSCHHHH
T ss_pred ccccccCCCceEeeCcccccCcccc----ccccCCccccChHHhhCCCCCcchhhHHHHHHHHHHHhCCCCCCCCChHHH
Confidence 6679999999998654332 234589999999999999999999999999999999999999985543221
Q ss_pred ccHHHHHHHHHhc--------CCccccc---------------------ccc-ccCCCCHHHHHHHHHHHHHccccCCCC
Q 008707 447 LNIVHWARSMIKK--------GDVISIV---------------------DPV-LIGNVKIESIWRIAEVAIQCVEQRGFS 496 (557)
Q Consensus 447 ~~~~~~~~~~~~~--------~~~~~~~---------------------d~~-l~~~~~~~~~~~l~~li~~cl~~~P~~ 496 (557)
... ....... ....... .+. -...........+.+++.+||+.||++
T Consensus 243 ~~~---~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~ 319 (339)
T 1z57_A 243 LAM---MERILGPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHERLFDLIQKMLEYDPAK 319 (339)
T ss_dssp HHH---HHHHHCSCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTT
T ss_pred HHH---HHHHhCCCCHHHHhhccchhHHhhccccccccccccchhhhcCcchhhhcccchhhHHHHHHHHHHHhCcCccc
Confidence 111 1111110 0000000 000 001112345668999999999999999
Q ss_pred CCCHHHHHH
Q 008707 497 RPKMQEIVL 505 (557)
Q Consensus 497 RPt~~evl~ 505 (557)
|||++|+++
T Consensus 320 Rpt~~ell~ 328 (339)
T 1z57_A 320 RITLREALK 328 (339)
T ss_dssp SCCHHHHTT
T ss_pred ccCHHHHhc
Confidence 999999985
No 213
>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}
Probab=100.00 E-value=7.5e-39 Score=333.29 Aligned_cols=261 Identities=20% Similarity=0.265 Sum_probs=180.6
Q ss_pred hcccCCCCceEEEEEEEc---CCcEEEEEEccCccchhHHHHHHHHHHHhhcCCCCccceeeEEEe--cCeeEEEEEecC
Q 008707 240 CKKIGKGSFGSVYYGKMK---DGKEVAVKIMADSCSHRTQQFVTEVALLSRIHHRNLVPLIGYCEE--EHQRILVYEYMH 314 (557)
Q Consensus 240 ~~~lG~G~~g~Vy~~~~~---~~~~vavK~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~--~~~~~lv~e~~~ 314 (557)
.++||+|+||.||+|.++ +++.||+|++.... ....+.+|+++++.++||||+++++++.. ....++||||+.
T Consensus 26 g~~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~lv~e~~~ 103 (405)
T 3rgf_A 26 GCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTG--ISMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLFDYAE 103 (405)
T ss_dssp SCCCC-----EEEEEEESSSSCCCCEEEEECSSSS--CCHHHHHHHHHHHHCCCTTBCCCCEEEEETTTTEEEEEEECCS
T ss_pred CcEeeecCCeEEEEEEEccCCCCeEEEEEEECCCC--CCHHHHHHHHHHHhcCCCCeeeEeeEEecCCCCeEEEEEeCCC
Confidence 568999999999999876 57899999987542 23467899999999999999999999954 678899999996
Q ss_pred CCChhhhhhccC------CCCCcCHHHHHHHHHHHHHHHHHHHcCCCCCeEeeccCCCCEEe----CCCCcEEEecccCc
Q 008707 315 NGTLRDRLHGSV------NQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILL----DINMRAKVSDFGLS 384 (557)
Q Consensus 315 ~gsL~~~l~~~~------~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~dlk~~NIll----~~~~~~kl~Dfgla 384 (557)
|+|.+++.... ....+++..++.++.||+.||+|||+ .+|+||||||+|||+ +.++.+||+|||++
T Consensus 104 -~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~---~~ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg~a 179 (405)
T 3rgf_A 104 -HDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHA---NWVLHRDLKPANILVMGEGPERGRVKIADMGFA 179 (405)
T ss_dssp -EEHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECCSSTTTTCEEECCTTCC
T ss_pred -CCHHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHh---CCEeCCCcCHHHeEEecCCCCCCcEEEEECCCc
Confidence 58887775321 22358999999999999999999998 999999999999999 67789999999999
Q ss_pred cccCCCCc--cccccccCCCCccCCcccCCC-CCCcccceehhHHHHHHHHhCCCCCCCCCccc----c--ccHHHHHHH
Q 008707 385 RQAEEDLT--HISSVARGTVGYLDPEYYGNQ-QLTEKSDVYSFGVVLLELISGKKPVSVEDFGA----E--LNIVHWARS 455 (557)
Q Consensus 385 ~~~~~~~~--~~~~~~~g~~~y~aPE~l~~~-~~s~~~DvwslG~ll~elltg~~pf~~~~~~~----~--~~~~~~~~~ 455 (557)
........ .......||+.|+|||++.+. .++.++|||||||++|+|++|+.||....... . ......+..
T Consensus 180 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~~~~~~~l~~i~~ 259 (405)
T 3rgf_A 180 RLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFN 259 (405)
T ss_dssp C----------------CCCTTCCHHHHTTCCSCCHHHHHHHHHHHHHHHHHSSCTTCCCC------CCCCHHHHHHHHH
T ss_pred eecCCCCcccccCCCceecCcccCchhhcCCCcccchhhhHHHHHHHHHHHhCCCCCCCccccccccccchHHHHHHHHH
Confidence 87654321 122345689999999999874 58999999999999999999999997544320 0 011111111
Q ss_pred HHhcCCcccccc---------------ccccCCCCH---------HHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 008707 456 MIKKGDVISIVD---------------PVLIGNVKI---------ESIWRIAEVAIQCVEQRGFSRPKMQEIVLA 506 (557)
Q Consensus 456 ~~~~~~~~~~~d---------------~~l~~~~~~---------~~~~~l~~li~~cl~~~P~~RPt~~evl~~ 506 (557)
.+..-......+ ......... .....+.+++.+||+.||++|||++|+++.
T Consensus 260 ~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~L~~dP~~R~ta~e~L~h 334 (405)
T 3rgf_A 260 VMGFPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLLTMDPIKRITSEQAMQD 334 (405)
T ss_dssp HHCCCCTTTCGGGGGSTTHHHHHHHCCGGGGTTCCHHHHHHTTTCCTTSHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred hhCCCChhhcchhhcCcchhhhhhhccccCCCcchhhhhHhhcCCCCCHHHHHHHHHHccCCcccCCCHHHHhcC
Confidence 111100000000 000000000 002367899999999999999999999874
No 214
>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...
Probab=100.00 E-value=1.2e-38 Score=327.76 Aligned_cols=260 Identities=23% Similarity=0.284 Sum_probs=190.3
Q ss_pred HHHhhcccCCCCceEEEEEEEc-CCcEEEEEEccCcc--chhHHHHHHHHHHHhhcCCCCccceeeEEEecC------ee
Q 008707 236 TNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSC--SHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEH------QR 306 (557)
Q Consensus 236 ~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~------~~ 306 (557)
.|++.+.||+|+||.||+|... +++.||||++.... ....+.+.+|+.+++.++||||+++++++...+ ..
T Consensus 26 ~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~ 105 (371)
T 2xrw_A 26 RYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDV 105 (371)
T ss_dssp TEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSCCSTTTCCEE
T ss_pred heeEeeeeEecCCEEEEEEEECCCCceEEEEEeccccCChHHHHHHHHHHHHHHhcCCCCccceEEeeccccccccccce
Confidence 3556789999999999999865 58899999986532 334567889999999999999999999997654 68
Q ss_pred EEEEEecCCCChhhhhhccCCCCCcCHHHHHHHHHHHHHHHHHHHcCCCCCeEeeccCCCCEEeCCCCcEEEecccCccc
Q 008707 307 ILVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQ 386 (557)
Q Consensus 307 ~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfgla~~ 386 (557)
++||||+. ++|.+.+. ..+++..+..++.||+.||+|||+ .+|+||||||+|||++.++.+||+|||++..
T Consensus 106 ~lv~e~~~-~~l~~~~~-----~~~~~~~~~~i~~qi~~al~~lH~---~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~~ 176 (371)
T 2xrw_A 106 YIVMELMD-ANLCQVIQ-----MELDHERMSYLLYQMLCGIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLART 176 (371)
T ss_dssp EEEEECCS-EEHHHHHH-----SCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECTTSCEEECCCCC---
T ss_pred EEEEEcCC-CCHHHHHh-----hccCHHHHHHHHHHHHHHHHHHHH---CCeecccCCHHHEEEcCCCCEEEEEeecccc
Confidence 99999996 57888775 247889999999999999999998 9999999999999999999999999999987
Q ss_pred cCCCCccccccccCCCCccCCcccCCCCCCcccceehhHHHHHHHHhCCCCCCCCCccccccHH----------------
Q 008707 387 AEEDLTHISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIV---------------- 450 (557)
Q Consensus 387 ~~~~~~~~~~~~~g~~~y~aPE~l~~~~~s~~~DvwslG~ll~elltg~~pf~~~~~~~~~~~~---------------- 450 (557)
...... .....||+.|+|||++.+..++.++|||||||++|+|++|+.||.+.+........
T Consensus 177 ~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 254 (371)
T 2xrw_A 177 AGTSFM--MTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQ 254 (371)
T ss_dssp ---------------CTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHC-CCCCCHHHHTTSC
T ss_pred cccccc--cCCceecCCccCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHHhh
Confidence 643321 22345899999999999999999999999999999999999999855432110000
Q ss_pred HHHHHHHhcCCcc------ccccccccCCC---CHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 008707 451 HWARSMIKKGDVI------SIVDPVLIGNV---KIESIWRIAEVAIQCVEQRGFSRPKMQEIVLA 506 (557)
Q Consensus 451 ~~~~~~~~~~~~~------~~~d~~l~~~~---~~~~~~~l~~li~~cl~~~P~~RPt~~evl~~ 506 (557)
............. ..+.....+.. .......+.+++.+||..||++|||++|+++.
T Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~h 319 (371)
T 2xrw_A 255 PTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQH 319 (371)
T ss_dssp HHHHHHHHSSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSGGGSCCHHHHHHS
T ss_pred hHHHHHHhhCccccccchhhhcccccCcccccccccccHHHHHHHHHHCcCChhhCCCHHHHhCC
Confidence 0000111110000 00000000111 12235678999999999999999999999874
No 215
>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*
Probab=100.00 E-value=3.5e-39 Score=328.66 Aligned_cols=257 Identities=22% Similarity=0.310 Sum_probs=201.9
Q ss_pred HHHhhcccCCCCceEEEEEEEcCCcEEEEEEccCccchh-----------------HHHHHHHHHHHhhcCCCCccceee
Q 008707 236 TNNFCKKIGKGSFGSVYYGKMKDGKEVAVKIMADSCSHR-----------------TQQFVTEVALLSRIHHRNLVPLIG 298 (557)
Q Consensus 236 ~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~-----------------~~~~~~E~~il~~l~h~nIv~~~~ 298 (557)
.|++.+.||+|+||.||+|.. +++.||+|++....... .+.+.+|+++++.++||||+++++
T Consensus 32 ~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~ 110 (348)
T 2pml_X 32 DYRIIRTLNQGKFNKIILCEK-DNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKNEYCLTCEG 110 (348)
T ss_dssp TEEEEEEEECCSSCCEEEEEE-TTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTCCCTTBCCCSE
T ss_pred ceEEEEEEcCCCCeEEEEEEc-CCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhCCCCCcceEEE
Confidence 455678999999999999998 89999999986432111 178999999999999999999999
Q ss_pred EEEecCeeEEEEEecCCCChhhh------hhccCCCCCcCHHHHHHHHHHHHHHHHHHHcCCCCCeEeeccCCCCEEeCC
Q 008707 299 YCEEEHQRILVYEYMHNGTLRDR------LHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDI 372 (557)
Q Consensus 299 ~~~~~~~~~lv~e~~~~gsL~~~------l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~dlk~~NIll~~ 372 (557)
++.+.+..++||||+++|+|.++ +... ....+++..++.++.|++.||+|||+ +.|++||||||+||+++.
T Consensus 111 ~~~~~~~~~lv~e~~~~~~L~~~~~~~~~l~~~-~~~~~~~~~~~~i~~qi~~~l~~lH~--~~~i~H~dl~p~Nil~~~ 187 (348)
T 2pml_X 111 IITNYDEVYIIYEYMENDSILKFDEYFFVLDKN-YTCFIPIQVIKCIIKSVLNSFSYIHN--EKNICHRDVKPSNILMDK 187 (348)
T ss_dssp EEESSSEEEEEEECCTTCBSSEESSSEESSCSS-SCCCCCHHHHHHHHHHHHHHHHHHHH--TSCEECCCCCGGGEEECT
T ss_pred EEeeCCeEEEEEeccCCCcHHHHHHHhhhhhhc-cccCCCHHHHHHHHHHHHHHHHHHhc--cCCEeecCCChHhEEEcC
Confidence 99999999999999999999998 5432 25679999999999999999999996 389999999999999999
Q ss_pred CCcEEEecccCccccCCCCccccccccCCCCccCCcccCCC-CCCc-ccceehhHHHHHHHHhCCCCCCCCCccccccHH
Q 008707 373 NMRAKVSDFGLSRQAEEDLTHISSVARGTVGYLDPEYYGNQ-QLTE-KSDVYSFGVVLLELISGKKPVSVEDFGAELNIV 450 (557)
Q Consensus 373 ~~~~kl~Dfgla~~~~~~~~~~~~~~~g~~~y~aPE~l~~~-~~s~-~~DvwslG~ll~elltg~~pf~~~~~~~~~~~~ 450 (557)
++.+||+|||++...... ......|++.|+|||.+.+. .++. ++||||||+++|+|++|+.||....... ..
T Consensus 188 ~~~~kl~dfg~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~--~~- 261 (348)
T 2pml_X 188 NGRVKLSDFGESEYMVDK---KIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLKISLV--EL- 261 (348)
T ss_dssp TSCEEECCCTTCEECBTT---EECSSCSCGGGCCGGGGSSCCCEEHHHHHHHHHHHHHHHHHHSSCSSCCSSCSH--HH-
T ss_pred CCcEEEeccccccccccc---cccCCCCCcCccCchhhcCCCCCCcchhhHHHHHHHHHHHHhCCCCCCCCCcHH--HH-
Confidence 999999999999876443 22334589999999999887 6666 9999999999999999999998543311 11
Q ss_pred HHHHHHHhcCCcccccc------cccc---CCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 008707 451 HWARSMIKKGDVISIVD------PVLI---GNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 505 (557)
Q Consensus 451 ~~~~~~~~~~~~~~~~d------~~l~---~~~~~~~~~~l~~li~~cl~~~P~~RPt~~evl~ 505 (557)
...+..+......+ +... .......+..+.+++.+||+.||++|||+.|+++
T Consensus 262 ---~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rps~~e~l~ 322 (348)
T 2pml_X 262 ---FNNIRTKNIEYPLDRNHFLYPLTNKKSTCSNNFLSNEDIDFLKLFLRKNPAERITSEDALK 322 (348)
T ss_dssp ---HHHHTSCCCCCCCSSSSSTTTTCC--------CCCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred ---HHHHhccCcCCccchhhhhccccccccccchhhcCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 12222222111100 0000 0001223457889999999999999999999986
No 216
>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...
Probab=100.00 E-value=1.9e-38 Score=325.44 Aligned_cols=260 Identities=21% Similarity=0.294 Sum_probs=198.2
Q ss_pred HHHhhcccCCCCceEEEEEEEc-CCcEEEEEEccCcc-chhHHHHHHHHHHHhhcCCCCccceeeEEEec-----CeeEE
Q 008707 236 TNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSC-SHRTQQFVTEVALLSRIHHRNLVPLIGYCEEE-----HQRIL 308 (557)
Q Consensus 236 ~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~-----~~~~l 308 (557)
.|++.+.||+|+||.||+|... +++.||+|++.... ....+.+.+|++++++++||||+++++++... ...++
T Consensus 28 ~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~i 107 (364)
T 3qyz_A 28 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYI 107 (364)
T ss_dssp TEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCTTCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCCCEEE
T ss_pred cEEEEEEeecCCCeEEEEEEECCCCeEEEEEEeccccCcHHHHHHHHHHHHHHhcCCCCCccceeEEecCCccccceEEE
Confidence 3556789999999999999876 68899999987543 33446789999999999999999999998754 36899
Q ss_pred EEEecCCCChhhhhhccCCCCCcCHHHHHHHHHHHHHHHHHHHcCCCCCeEeeccCCCCEEeCCCCcEEEecccCccccC
Q 008707 309 VYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAE 388 (557)
Q Consensus 309 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfgla~~~~ 388 (557)
|||++. |+|.+++.. ..+++..+..++.|++.||+|||+ .||+||||||+||+++.++.+||+|||++....
T Consensus 108 v~e~~~-~~L~~~l~~----~~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~ 179 (364)
T 3qyz_A 108 VQDLME-TDLYKLLKT----QHLSNDHICYFLYQILRGLKYIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVAD 179 (364)
T ss_dssp EEECCS-EEHHHHHHH----CCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTCCEEECCCTTCEECC
T ss_pred EEcccC-cCHHHHHHh----CCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCChHhEEECCCCCEEEEeCcceEecC
Confidence 999996 599998863 458999999999999999999998 999999999999999999999999999998765
Q ss_pred CCCccc--cccccCCCCccCCcccCC-CCCCcccceehhHHHHHHHHhCCCCCCCCCccccccHHHHHHHHHhcCCcc--
Q 008707 389 EDLTHI--SSVARGTVGYLDPEYYGN-QQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVI-- 463 (557)
Q Consensus 389 ~~~~~~--~~~~~g~~~y~aPE~l~~-~~~s~~~DvwslG~ll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~-- 463 (557)
...... .....||+.|+|||++.+ ..++.++||||||+++|+|++|+.||...+..+.. ..+..........
T Consensus 180 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~---~~i~~~~~~~~~~~~ 256 (364)
T 3qyz_A 180 PDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQL---NHILGILGSPSQEDL 256 (364)
T ss_dssp GGGCBCCTTCCCCSCGGGCCHHHHHTBCSCSTHHHHHHHHHHHHHHHHSSCSSCCSSGGGHH---HHHHHHHCSCCHHHH
T ss_pred CCCCccccccccccccCCCCCHHhcCCCCCCcchhHHHHHHHHHHHHHCCCCCCCCChHHHH---HHHHHHhCCCCHHHH
Confidence 432221 233468999999998654 45899999999999999999999999855433221 1111111110000
Q ss_pred -------------cccccccc--CCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 008707 464 -------------SIVDPVLI--GNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLA 506 (557)
Q Consensus 464 -------------~~~d~~l~--~~~~~~~~~~l~~li~~cl~~~P~~RPt~~evl~~ 506 (557)
....+... ..........+.+++.+||+.||++|||++|+++.
T Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 314 (364)
T 3qyz_A 257 NCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAH 314 (364)
T ss_dssp HTCCCHHHHHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred HHhhhhhHHHHHHhcCCccCCCHHHhCCCCCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 00000000 00001123468899999999999999999999863
No 217
>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*
Probab=100.00 E-value=8.4e-40 Score=336.44 Aligned_cols=251 Identities=10% Similarity=0.035 Sum_probs=178.2
Q ss_pred HHhhcccCCCCceEEEEEEEc-CCcEEEEEEccCccc---hhHHHHHHHHHHHhhc--CCCCcccee-------eEEEec
Q 008707 237 NNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCS---HRTQQFVTEVALLSRI--HHRNLVPLI-------GYCEEE 303 (557)
Q Consensus 237 ~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~il~~l--~h~nIv~~~-------~~~~~~ 303 (557)
|.+.+.||+|+||.||+|.+. +|+.||+|++..... ...+.+.+|+++++.+ +||||++++ +++...
T Consensus 64 y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~hp~iv~~~~~~~~p~d~~~~~ 143 (371)
T 3q60_A 64 LKLVEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLGESPEEARDRRRLLLPSDAVAVQ 143 (371)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECCSTTHHHHHHHHHHHHHHHHHHHC----------CBCCCCEEEEET
T ss_pred eeeeeeccCCCCEEEEEEEECCCCceeEEEEEEecccccccHHHHHHHHHHHHHHhcccChhhhhhceeEEeeehheecC
Confidence 446789999999999999876 689999999976432 3445677886655555 599987755 444332
Q ss_pred -----------------CeeEEEEEecCCCChhhhhhccCCCCCcCHHHH------HHHHHHHHHHHHHHHcCCCCCeEe
Q 008707 304 -----------------HQRILVYEYMHNGTLRDRLHGSVNQKPLDWLTR------LQIAHDAAKGLEYLHTGCNPGIIH 360 (557)
Q Consensus 304 -----------------~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~------~~i~~qia~aL~~LH~~~~~~ivH 360 (557)
...++||||++ |+|.+++... ...+++..+ ..++.||+.||+|||+ ++|+|
T Consensus 144 ~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~--~~~~~~~~~~~~~vk~~i~~qi~~aL~~LH~---~~ivH 217 (371)
T 3q60_A 144 SQPPFAQLSPGQDDYAVANYLLLMPAAS-VDLELLFSTL--DFVYVFRGDEGILALHILTAQLIRLAANLQS---KGLVH 217 (371)
T ss_dssp TSCSSSBCSCC---CCEEEEEEEECCCS-EEHHHHHHHH--HHSCCCCHHHHHHHHHHHHHHHHHHHHHHHH---TTEEE
T ss_pred CCCCeeeccCCcccceeeeEEEEecCCC-CCHHHHHHHh--ccccchhhhhhhhhHHHHHHHHHHHHHHHHH---CCCcc
Confidence 34799999998 8999999753 223344445 6778999999999998 99999
Q ss_pred eccCCCCEEeCCCCcEEEecccCccccCCCCccccccccCCCCccCCcccCC--CCCCcccceehhHHHHHHHHhCCCCC
Q 008707 361 RDVKSSNILLDINMRAKVSDFGLSRQAEEDLTHISSVARGTVGYLDPEYYGN--QQLTEKSDVYSFGVVLLELISGKKPV 438 (557)
Q Consensus 361 ~dlk~~NIll~~~~~~kl~Dfgla~~~~~~~~~~~~~~~g~~~y~aPE~l~~--~~~s~~~DvwslG~ll~elltg~~pf 438 (557)
|||||+|||++.++.+||+|||+++....... ...+|+.|+|||++.+ ..++.++|||||||++|||++|+.||
T Consensus 218 rDikp~NIll~~~~~~kL~DFG~a~~~~~~~~----~~~~t~~y~aPE~~~~~~~~~~~~~DiwSlG~il~elltg~~Pf 293 (371)
T 3q60_A 218 GHFTPDNLFIMPDGRLMLGDVSALWKVGTRGP----ASSVPVTYAPREFLNASTATFTHALNAWQLGLSIYRVWCLFLPF 293 (371)
T ss_dssp TTCSGGGEEECTTSCEEECCGGGEEETTCEEE----GGGSCGGGCCHHHHTCSEEECCHHHHHHHHHHHHHHHHHSSCST
T ss_pred CcCCHHHEEECCCCCEEEEecceeeecCCCcc----CccCCcCCcChhhccCCCCCcCccccHHHHHHHHHHHHhCCCCC
Confidence 99999999999999999999999987643221 2346799999999987 68899999999999999999999999
Q ss_pred CCCCccccccHHHHHHHHHhcCCccccccccccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 008707 439 SVEDFGAELNIVHWARSMIKKGDVISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 505 (557)
Q Consensus 439 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~evl~ 505 (557)
........... .....................+..+.+++.+||+.||++|||+.|+++
T Consensus 294 ~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 352 (371)
T 3q60_A 294 GLVTPGIKGSW--------KRPSLRVPGTDSLAFGSCTPLPDFVKTLIGRFLNFDRRRRLLPLEAME 352 (371)
T ss_dssp TBCCTTCTTCC--------CBCCTTSCCCCSCCCTTSSCCCHHHHHHHHHHTCSSTTTCCCHHHHTT
T ss_pred CCcCcccccch--------hhhhhhhccccccchhhccCCCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 85532211000 000000000000000001123447889999999999999999999975
No 218
>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=1.9e-39 Score=335.18 Aligned_cols=263 Identities=21% Similarity=0.229 Sum_probs=194.5
Q ss_pred HHHhhcccCCCCceEEEEEEEc-CCcEEEEEEccCccchhHHHHHHHHHHHhhcCCCCccceeeEEEec-----------
Q 008707 236 TNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCSHRTQQFVTEVALLSRIHHRNLVPLIGYCEEE----------- 303 (557)
Q Consensus 236 ~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~----------- 303 (557)
.|++.+.||+|+||.||+|... +|+.||+|++..... ...+|+++++.++||||+++++++...
T Consensus 8 ~y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~----~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~~~~~ 83 (383)
T 3eb0_A 8 KYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDPR----YKNRELDIMKVLDHVNIIKLVDYFYTTGDEEPKPPQPP 83 (383)
T ss_dssp TEEEEEEEECC-CEEEEEEEETTTCCEEEEEEEECCTT----SCCHHHHHHTTCCCTTBCCEEEEEEEC-----------
T ss_pred eEEEEEEEEeccCEEEEEEEECCCCCEEEEEEEecCcc----hHHHHHHHHHHcCCCCccchhheeeecCcccccccccc
Confidence 4556799999999999999864 689999998865422 233799999999999999999998443
Q ss_pred ---------------------------CeeEEEEEecCCCChhhhhhcc-CCCCCcCHHHHHHHHHHHHHHHHHHHcCCC
Q 008707 304 ---------------------------HQRILVYEYMHNGTLRDRLHGS-VNQKPLDWLTRLQIAHDAAKGLEYLHTGCN 355 (557)
Q Consensus 304 ---------------------------~~~~lv~e~~~~gsL~~~l~~~-~~~~~l~~~~~~~i~~qia~aL~~LH~~~~ 355 (557)
...++||||++ |+|.+.+... .....+++..+..++.||++||+|||+
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~--- 159 (383)
T 3eb0_A 84 DDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVP-DTLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFIHS--- 159 (383)
T ss_dssp --------------------------CCEEEEEECCCS-EEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHT---
T ss_pred cccccccccccccccccccccccCCCceEEEEEEecCC-ccHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHH---
Confidence 34789999997 5877776532 145679999999999999999999998
Q ss_pred CCeEeeccCCCCEEeC-CCCcEEEecccCccccCCCCccccccccCCCCccCCcccCCC-CCCcccceehhHHHHHHHHh
Q 008707 356 PGIIHRDVKSSNILLD-INMRAKVSDFGLSRQAEEDLTHISSVARGTVGYLDPEYYGNQ-QLTEKSDVYSFGVVLLELIS 433 (557)
Q Consensus 356 ~~ivH~dlk~~NIll~-~~~~~kl~Dfgla~~~~~~~~~~~~~~~g~~~y~aPE~l~~~-~~s~~~DvwslG~ll~ellt 433 (557)
.||+||||||+||+++ .++.+||+|||++........ .....+|+.|+|||.+.+. .++.++||||+||++|||++
T Consensus 160 ~gi~H~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~~--~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~ 237 (383)
T 3eb0_A 160 LGICHRDIKPQNLLVNSKDNTLKLCDFGSAKKLIPSEP--SVAYICSRFYRAPELMLGATEYTPSIDLWSIGCVFGELIL 237 (383)
T ss_dssp TTEECSCCCGGGEEEETTTTEEEECCCTTCEECCTTSC--CCCCCCCSSCCCHHHHTTCSSCCTHHHHHHHHHHHHHHHH
T ss_pred CcCccCccCHHHEEEcCCCCcEEEEECCCCcccCCCCC--CcCcccCCCccCHHHhcCCCCCCcchhhhhHHHHHHHHHh
Confidence 9999999999999997 688999999999987644332 2234579999999998765 58999999999999999999
Q ss_pred CCCCCCCCCccccccHHHHHHHHHhcC----------CccccccccccC-----CCCHHHHHHHHHHHHHccccCCCCCC
Q 008707 434 GKKPVSVEDFGAELNIVHWARSMIKKG----------DVISIVDPVLIG-----NVKIESIWRIAEVAIQCVEQRGFSRP 498 (557)
Q Consensus 434 g~~pf~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~d~~l~~-----~~~~~~~~~l~~li~~cl~~~P~~RP 498 (557)
|+.||.+.+..+. +...+ ...... ......-+.... ..+...+..+.+++.+||+.||++||
T Consensus 238 g~~pf~~~~~~~~--~~~i~-~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~ 314 (383)
T 3eb0_A 238 GKPLFSGETSIDQ--LVRII-QIMGTPTKEQMIRMNPHYTEVRFPTLKAKDWRKILPEGTPSLAIDLLEQILRYEPDLRI 314 (383)
T ss_dssp SSCSSCCSSHHHH--HHHHH-HHHCCCCHHHHHHHCTTC--CCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSC
T ss_pred CCCCCCCCChHHH--HHHHH-HHhCCCCHHHHHHhCcccccccCCccCcccHHhhCCCCCCHHHHHHHHHHccCChhhCC
Confidence 9999985443221 11111 111100 000000000000 01112334688999999999999999
Q ss_pred CHHHHHHH--HHhhh
Q 008707 499 KMQEIVLA--IQDSI 511 (557)
Q Consensus 499 t~~evl~~--L~~~~ 511 (557)
|+.|+++. ++++.
T Consensus 315 t~~e~l~hp~f~~~~ 329 (383)
T 3eb0_A 315 NPYEAMAHPFFDHLR 329 (383)
T ss_dssp CHHHHHTSGGGHHHH
T ss_pred CHHHHhcCHHHHHHH
Confidence 99999853 44443
No 219
>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}
Probab=100.00 E-value=9.8e-39 Score=322.34 Aligned_cols=248 Identities=24% Similarity=0.406 Sum_probs=192.1
Q ss_pred HHhhcccCCCCceEEEEEEEc-CCcEEEEEEccCccchhHHHHHHHHHHHhhc-CCCCccceeeEEEe------cCeeEE
Q 008707 237 NNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCSHRTQQFVTEVALLSRI-HHRNLVPLIGYCEE------EHQRIL 308 (557)
Q Consensus 237 ~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~il~~l-~h~nIv~~~~~~~~------~~~~~l 308 (557)
|++.+.||+|+||.||+|.+. +++.||+|++.... ...+.+.+|+.+++++ +||||+++++++.. .+..++
T Consensus 26 y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~-~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~~~~~l 104 (326)
T 2x7f_A 26 FELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTG-DEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQLWL 104 (326)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCS-STTHHHHHHHHHHHHHCCSTTBCCEEEEEEECC--CCCCEEEE
T ss_pred EEEEEEeccCCCEEEEEEEECCCCCeEEEEEEecCc-ccHHHHHHHHHHHHhccCCCCeeeeeeEEeeccCccccceEEE
Confidence 456789999999999999874 68999999986442 3446788999999999 79999999999976 467899
Q ss_pred EEEecCCCChhhhhhccCCCCCcCHHHHHHHHHHHHHHHHHHHcCCCCCeEeeccCCCCEEeCCCCcEEEecccCccccC
Q 008707 309 VYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAE 388 (557)
Q Consensus 309 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfgla~~~~ 388 (557)
||||+++|+|.+++... ....+++..++.++.||+.||+|||+ .+++||||||+||+++.++.+||+|||++....
T Consensus 105 v~e~~~~~~L~~~l~~~-~~~~~~~~~~~~i~~qi~~~l~~lH~---~~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~ 180 (326)
T 2x7f_A 105 VMEFCGAGSVTDLIKNT-KGNTLKEEWIAYICREILRGLSHLHQ---HKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLD 180 (326)
T ss_dssp EEECCTTEEHHHHHHHS-GGGCCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCSGGGEEECTTCCEEECCCTTTC---
T ss_pred EEEcCCCCcHHHHHHhc-ccCCCCHHHHHHHHHHHHHHHHHHHH---CCccccCCcHHHEEEcCCCCEEEeeCcCceecC
Confidence 99999999999999754 23568899999999999999999998 999999999999999999999999999988764
Q ss_pred CCCccccccccCCCCccCCcccC-----CCCCCcccceehhHHHHHHHHhCCCCCCCCCccccccHHHHHHHHHhcCCcc
Q 008707 389 EDLTHISSVARGTVGYLDPEYYG-----NQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVI 463 (557)
Q Consensus 389 ~~~~~~~~~~~g~~~y~aPE~l~-----~~~~s~~~DvwslG~ll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 463 (557)
..... .....|++.|+|||.+. +..++.++||||||+++|+|++|+.||....... ... .+..+...
T Consensus 181 ~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~------~~~-~~~~~~~~ 252 (326)
T 2x7f_A 181 RTVGR-RNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMR------ALF-LIPRNPAP 252 (326)
T ss_dssp -----------CCGGGCCHHHHC--------CCTTHHHHHHHHHHHHHHHSSCTTTTSCHHH------HHH-HHHHSCCC
T ss_pred cCccc-cccccCCccccChhhhccccccCcCCCccchHHHHHHHHHHHHhCCCCCCCCcHHH------HHH-HhhcCccc
Confidence 33221 22345899999999987 5678899999999999999999999997433211 111 11112111
Q ss_pred ccccccccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 008707 464 SIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 505 (557)
Q Consensus 464 ~~~d~~l~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~evl~ 505 (557)
.... .. .+..+.+++.+||..||++|||+.|+++
T Consensus 253 ~~~~----~~----~~~~l~~li~~~l~~dp~~Rps~~~ll~ 286 (326)
T 2x7f_A 253 RLKS----KK----WSKKFQSFIESCLVKNHSQRPATEQLMK 286 (326)
T ss_dssp CCSC----SC----SCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred cCCc----cc----cCHHHHHHHHHHhccChhhCCCHHHHhh
Confidence 1111 11 1347889999999999999999999987
No 220
>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*
Probab=100.00 E-value=6.4e-39 Score=319.36 Aligned_cols=248 Identities=26% Similarity=0.306 Sum_probs=199.2
Q ss_pred HHhhcccCCCCceEEEEEEEc-CCcEEEEEEccCcc---------chhHHHHHHHHHHHhhcC-CCCccceeeEEEecCe
Q 008707 237 NNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSC---------SHRTQQFVTEVALLSRIH-HRNLVPLIGYCEEEHQ 305 (557)
Q Consensus 237 ~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---------~~~~~~~~~E~~il~~l~-h~nIv~~~~~~~~~~~ 305 (557)
|++.+.||+|+||.||+|... +++.||+|++.... ....+.+.+|+++++++. ||||+++++++...+.
T Consensus 19 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~ 98 (298)
T 1phk_A 19 YEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYETNTF 98 (298)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSE
T ss_pred cceeeeecCCCceEEEEEEEcCcCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeeeeeeeccCCe
Confidence 445789999999999999886 58899999986432 122456889999999995 9999999999999999
Q ss_pred eEEEEEecCCCChhhhhhccCCCCCcCHHHHHHHHHHHHHHHHHHHcCCCCCeEeeccCCCCEEeCCCCcEEEecccCcc
Q 008707 306 RILVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSR 385 (557)
Q Consensus 306 ~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfgla~ 385 (557)
.++||||+++++|.+++.. ...+++..+..++.||+.||+|||+ .+++||||||+||+++.++.+||+|||++.
T Consensus 99 ~~lv~e~~~~~~L~~~l~~---~~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~ 172 (298)
T 1phk_A 99 FFLVFDLMKKGELFDYLTE---KVTLSEKETRKIMRALLEVICALHK---LNIVHRDLKPENILLDDDMNIKLTDFGFSC 172 (298)
T ss_dssp EEEEEECCTTCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTCCEEECCCTTCE
T ss_pred EEEEEeccCCCcHHHHHhc---cCCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCcceEEEcCCCcEEEecccchh
Confidence 9999999999999999974 3568999999999999999999998 999999999999999999999999999998
Q ss_pred ccCCCCccccccccCCCCccCCcccC------CCCCCcccceehhHHHHHHHHhCCCCCCCCCccccccHHHHHHHHHhc
Q 008707 386 QAEEDLTHISSVARGTVGYLDPEYYG------NQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKK 459 (557)
Q Consensus 386 ~~~~~~~~~~~~~~g~~~y~aPE~l~------~~~~s~~~DvwslG~ll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~ 459 (557)
....... .....|++.|+|||.+. ...++.++||||||+++|+|++|..||...... .. ...+..
T Consensus 173 ~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~------~~-~~~~~~ 243 (298)
T 1phk_A 173 QLDPGEK--LREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQM------LM-LRMIMS 243 (298)
T ss_dssp ECCTTCC--BCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHH------HH-HHHHHH
T ss_pred hcCCCcc--cccccCCccccCHHHhccccccccccCCcccccHhHHHHHHHHHHCCCCCcCccHH------HH-HHHHhc
Confidence 7654322 22345899999999984 456889999999999999999999999743321 11 112222
Q ss_pred CCccccccccccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 008707 460 GDVISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 505 (557)
Q Consensus 460 ~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~evl~ 505 (557)
+..... .+ .....+..+.+++.+||+.||++|||+.|+++
T Consensus 244 ~~~~~~-~~-----~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~ 283 (298)
T 1phk_A 244 GNYQFG-SP-----EWDDYSDTVKDLVSRFLVVQPQKRYTAEEALA 283 (298)
T ss_dssp TCCCCC-TT-----TGGGSCHHHHHHHHHHCCSSGGGSCCHHHHTT
T ss_pred CCcccC-cc-----cccccCHHHHHHHHHHccCCcccCCCHHHHHh
Confidence 221100 00 01122347889999999999999999999975
No 221
>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*
Probab=100.00 E-value=1.6e-39 Score=333.21 Aligned_cols=260 Identities=22% Similarity=0.275 Sum_probs=190.6
Q ss_pred HHHhhcccCCCCceEEEEEEEcCCcEEEEEEccCccc-----------hhHHHHHHHHHHHhhcCCCCccceeeEEEe--
Q 008707 236 TNNFCKKIGKGSFGSVYYGKMKDGKEVAVKIMADSCS-----------HRTQQFVTEVALLSRIHHRNLVPLIGYCEE-- 302 (557)
Q Consensus 236 ~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~-----------~~~~~~~~E~~il~~l~h~nIv~~~~~~~~-- 302 (557)
.|++.+.||+|+||.||+|...+|+.||||++..... ...+.+.+|+++++.++||||+++++++..
T Consensus 23 ~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~ 102 (362)
T 3pg1_A 23 PYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPNILGLRDIFVHFE 102 (362)
T ss_dssp SCEEEEEEEEETTEEEEEEECTTSCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEEEECC
T ss_pred ceEEeEEeccCCCEEEEEEECCCCCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhCCCcCccceeeeEEecc
Confidence 3455789999999999999988899999999854321 123678999999999999999999999854
Q ss_pred ---cCeeEEEEEecCCCChhhhhhccCCCCCcCHHHHHHHHHHHHHHHHHHHcCCCCCeEeeccCCCCEEeCCCCcEEEe
Q 008707 303 ---EHQRILVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVS 379 (557)
Q Consensus 303 ---~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~ 379 (557)
....++||||+. |+|.+.+.. ....+++..+..++.||+.||+|||+ .+++||||||+||+++.++.+||+
T Consensus 103 ~~~~~~~~lv~e~~~-~~l~~~~~~--~~~~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~Dlkp~NIl~~~~~~~kl~ 176 (362)
T 3pg1_A 103 EPAMHKLYLVTELMR-TDLAQVIHD--QRIVISPQHIQYFMYHILLGLHVLHE---AGVVHRDLHPGNILLADNNDITIC 176 (362)
T ss_dssp TTTCCEEEEEEECCS-EEHHHHHHC--TTSCCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTCCEEEC
T ss_pred CCCcceEEEEEccCC-CCHHHHHHh--cccCCCHHHHHHHHHHHHHHHHHHHH---CcCEecCCChHHEEEcCCCCEEEE
Confidence 336799999997 688888874 34578999999999999999999999 999999999999999999999999
Q ss_pred cccCccccCCCCccccccccCCCCccCCcccCC-CCCCcccceehhHHHHHHHHhCCCCCCCCCccccccHHHHHHHHHh
Q 008707 380 DFGLSRQAEEDLTHISSVARGTVGYLDPEYYGN-QQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIK 458 (557)
Q Consensus 380 Dfgla~~~~~~~~~~~~~~~g~~~y~aPE~l~~-~~~s~~~DvwslG~ll~elltg~~pf~~~~~~~~~~~~~~~~~~~~ 458 (557)
|||++........ .....|++.|+|||.+.+ ..++.++||||||+++|+|++|+.||........ ...+.....
T Consensus 177 Dfg~~~~~~~~~~--~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~---~~~i~~~~~ 251 (362)
T 3pg1_A 177 DFNLAREDTADAN--KTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQ---LNKIVEVVG 251 (362)
T ss_dssp CTTC-----------------CGGGCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHH---HHHHHHHHC
T ss_pred ecCcccccccccc--cceecccceecCcHHhcCCCCCCcHhHHHhHHHHHHHHHhCCCCCCCCCHHHH---HHHHHHHcC
Confidence 9999975443322 223458899999999877 6789999999999999999999999985443211 111111111
Q ss_pred cCCccc-----------ccccccc-------CCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 008707 459 KGDVIS-----------IVDPVLI-------GNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLA 506 (557)
Q Consensus 459 ~~~~~~-----------~~d~~l~-------~~~~~~~~~~l~~li~~cl~~~P~~RPt~~evl~~ 506 (557)
...... .+..... ..........+.+++.+||+.||++|||++|+++.
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 317 (362)
T 3pg1_A 252 TPKIEDVVMFSSPSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEFNPQRRISTEQALRH 317 (362)
T ss_dssp CCCHHHHHHTSCHHHHHHTTTCCCCCCCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred CCChHHhhhccchhhhHHHHhhcccCChhhHHhhCCCCCHHHHHHHHHHhcCChhhCCCHHHHHcC
Confidence 100000 0000000 00011123468899999999999999999999863
No 222
>3an0_A Dual specificity mitogen-activated protein kinase; auto inhibition state, activation helix, serine/threonine-PR kinase; HET: ANK; 2.60A {Homo sapiens} PDB: 3vn9_A*
Probab=100.00 E-value=8.4e-39 Score=324.88 Aligned_cols=250 Identities=21% Similarity=0.333 Sum_probs=195.5
Q ss_pred HHHhhcccCCCCceEEEEEEEc-CCcEEEEEEccCcc-chhHHHHHHHHHH-HhhcCCCCccceeeEEEecCeeEEEEEe
Q 008707 236 TNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSC-SHRTQQFVTEVAL-LSRIHHRNLVPLIGYCEEEHQRILVYEY 312 (557)
Q Consensus 236 ~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~i-l~~l~h~nIv~~~~~~~~~~~~~lv~e~ 312 (557)
.|++.+.||+|+||.||+|... +|+.||||++.... ......+..|..+ ++.++||||+++++++...+..++||||
T Consensus 52 ~~~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~~~~~~~~~~~~~lv~e~ 131 (340)
T 3an0_A 52 DLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWICMEL 131 (340)
T ss_dssp CEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCCCCHHHHHHHHHHHHHHTTCCCTTTCCEEEEEECSSCEEEEECC
T ss_pred heeEeeEecccCCEEEEEEEEcCCCCEEEEEEeccccCcHHHHHHHHHHHHHHhhcCCCcEEEEeeEEEeCCcEEEEHHH
Confidence 3456788999999999999874 68999999987543 2334455566665 7778999999999999999999999999
Q ss_pred cCCCChhhhhhccC-CCCCcCHHHHHHHHHHHHHHHHHHHcCCCC-CeEeeccCCCCEEeCCCCcEEEecccCccccCCC
Q 008707 313 MHNGTLRDRLHGSV-NQKPLDWLTRLQIAHDAAKGLEYLHTGCNP-GIIHRDVKSSNILLDINMRAKVSDFGLSRQAEED 390 (557)
Q Consensus 313 ~~~gsL~~~l~~~~-~~~~l~~~~~~~i~~qia~aL~~LH~~~~~-~ivH~dlk~~NIll~~~~~~kl~Dfgla~~~~~~ 390 (557)
+++ +|.+++.... ....+++..++.++.||+.||+|||+ . +++||||||+||+++.++.+||+|||++......
T Consensus 132 ~~~-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH~---~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~ 207 (340)
T 3an0_A 132 MDT-SLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHS---KLSVIHRDVKPSNVLINALGQVKMCDFGISGYLVDS 207 (340)
T ss_dssp CSE-EHHHHHHHHHHTSCCCCHHHHHHHHHHHHHHHHHHHH---HTCCCCCSCCSTTEEECSTTCEEECCCSHHHHHSCH
T ss_pred hhC-cHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhh---cCCeecCCCCHHHEEECCCCCEEEeeCCCceecccc
Confidence 975 9988876421 35679999999999999999999998 6 9999999999999999999999999999876432
Q ss_pred CccccccccCCCCccCCcccC----CCCCCcccceehhHHHHHHHHhCCCCCCCCCccccccHHHHHHHHHhcCCccccc
Q 008707 391 LTHISSVARGTVGYLDPEYYG----NQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIV 466 (557)
Q Consensus 391 ~~~~~~~~~g~~~y~aPE~l~----~~~~s~~~DvwslG~ll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 466 (557)
.. .....||+.|+|||++. ...++.++||||||+++|||+||+.||...... .......+..... ...
T Consensus 208 ~~--~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~tg~~p~~~~~~~-----~~~~~~~~~~~~~-~~~ 279 (340)
T 3an0_A 208 VA--KTIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTP-----FQQLKQVVEEPSP-QLP 279 (340)
T ss_dssp HH--HHHSSCCCCCCCHHHHSCCTTCCSCCHHHHHHHHHHHHHHHHHTSCSSCCCSCH-----HHHHHHHHHSCCC-CCC
T ss_pred cc--cccCCCCccccCccccccccccCCCCchhhHHHHHHHHHHHHHCCCCCccccch-----HHHHHHHhcCCCC-CCC
Confidence 21 22235899999999964 347899999999999999999999999743221 1112222222111 110
Q ss_pred cccccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 008707 467 DPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 505 (557)
Q Consensus 467 d~~l~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~evl~ 505 (557)
. ...+..+.+++.+||+.||++|||+.||++
T Consensus 280 ~--------~~~~~~~~~li~~~l~~dp~~Rps~~ell~ 310 (340)
T 3an0_A 280 A--------DKFSAEFVDFTSQCLKKNSKERPTYPELMQ 310 (340)
T ss_dssp G--------GGSCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred c--------ccCCHHHHHHHHHHccCCcccCcCHHHHhc
Confidence 0 112346889999999999999999999987
No 223
>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...
Probab=100.00 E-value=4.3e-39 Score=330.18 Aligned_cols=255 Identities=21% Similarity=0.310 Sum_probs=181.0
Q ss_pred HHHhhcccCCCCceEEEEEEEc-CCcEEEEEEccCcc--chhHHHHHHHHHHHhhcCCCCccceeeEEEec------Cee
Q 008707 236 TNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSC--SHRTQQFVTEVALLSRIHHRNLVPLIGYCEEE------HQR 306 (557)
Q Consensus 236 ~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~------~~~ 306 (557)
.|++.+.||+|+||.||+|... +|+.||||++.... ....+.+.+|+++++.++||||+++++++... ...
T Consensus 30 ~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~~~~ 109 (367)
T 2fst_X 30 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDV 109 (367)
T ss_dssp TEEEEEECC----CCEEEEEETTTTEEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCCCC
T ss_pred ceEEeeEEeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCccccCCeE
Confidence 4556789999999999999864 68999999986532 33456788999999999999999999998654 567
Q ss_pred EEEEEecCCCChhhhhhccCCCCCcCHHHHHHHHHHHHHHHHHHHcCCCCCeEeeccCCCCEEeCCCCcEEEecccCccc
Q 008707 307 ILVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQ 386 (557)
Q Consensus 307 ~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfgla~~ 386 (557)
++|+|++ +++|.+++.. ..+++..+..++.||++||+|||+ .||+||||||+||+++.++.+||+|||+++.
T Consensus 110 ~lv~e~~-~~~L~~~~~~----~~l~~~~~~~i~~qi~~aL~~LH~---~givH~Dlkp~NIll~~~~~~kL~DFG~a~~ 181 (367)
T 2fst_X 110 YLVTHLM-GADLNNIVKC----QKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARH 181 (367)
T ss_dssp EEEEECC-CEECC---------CCCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTCCEEECC------
T ss_pred EEEeccc-CCCHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHH---CCeeeCCCCHhhEEECCCCCEEEeecccccc
Confidence 9999999 7899988863 568999999999999999999998 9999999999999999999999999999987
Q ss_pred cCCCCccccccccCCCCccCCcccCC-CCCCcccceehhHHHHHHHHhCCCCCCCCCccccccHHHHHHHHHhcCCcccc
Q 008707 387 AEEDLTHISSVARGTVGYLDPEYYGN-QQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISI 465 (557)
Q Consensus 387 ~~~~~~~~~~~~~g~~~y~aPE~l~~-~~~s~~~DvwslG~ll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 465 (557)
.... .....||+.|+|||++.+ ..++.++||||+||++|||++|+.||.+.+..... ..+...+.... .+.
T Consensus 182 ~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~l---~~i~~~~g~p~-~~~ 253 (367)
T 2fst_X 182 TADE----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQL---KLILRLVGTPG-AEL 253 (367)
T ss_dssp -------------CCCTTCCHHHHTTCCSCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHH---HHHHHHHCSCC-HHH
T ss_pred cccc----CCCcCcCcCccChHHHcCCcCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHH---HHHHHHhCCCC-HHH
Confidence 5433 223458999999999877 68899999999999999999999999855432211 11111111100 000
Q ss_pred ccc-----------cc--cCCCCH-----HHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 008707 466 VDP-----------VL--IGNVKI-----ESIWRIAEVAIQCVEQRGFSRPKMQEIVLA 506 (557)
Q Consensus 466 ~d~-----------~l--~~~~~~-----~~~~~l~~li~~cl~~~P~~RPt~~evl~~ 506 (557)
+.. .+ ...... .....+.+++.+||..||++|||++|+++.
T Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~t~~e~L~h 312 (367)
T 2fst_X 254 LKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAH 312 (367)
T ss_dssp HTTCCCHHHHHHHHTSCCCCCCCHHHHTTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred HHHhhhHHHHHHHhccCCCCCCCHHHHCCCCCHHHHHHHHHhCCCCcccCcCHHHHhcC
Confidence 000 00 000000 112467899999999999999999999874
No 224
>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}
Probab=100.00 E-value=3.5e-39 Score=324.53 Aligned_cols=256 Identities=25% Similarity=0.375 Sum_probs=196.6
Q ss_pred HHHhhcccCCCCceEEEEEEEcCCcEEEEEEccCcc--chhHHHHHHHHHHHhhcCCCCccceeeEEEecCeeEEEEEec
Q 008707 236 TNNFCKKIGKGSFGSVYYGKMKDGKEVAVKIMADSC--SHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYEYM 313 (557)
Q Consensus 236 ~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~lv~e~~ 313 (557)
.|++.+.||+|+||.||+|.++. .||+|++.... ....+.+.+|+.+++.++||||+++++++.+.+..++||||+
T Consensus 34 ~~~~~~~lg~G~~g~V~~~~~~~--~~avk~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~iv~e~~ 111 (319)
T 2y4i_B 34 QLEIGELIGKGRFGQVYHGRWHG--EVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACMSPPHLAIITSLC 111 (319)
T ss_dssp CEECCCBCCCSSSSEEEEEEESS--SEEEEECCCCSCCCCCCCCCCTTGGGGTTCCCTTBCCCCEEEECSSCEEEECBCC
T ss_pred HeEEeeEeccCCceEEEEEEEcC--eEEEEEeecCCCCHHHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCceEEEeecc
Confidence 34567999999999999998863 49999886432 223356778999999999999999999999999999999999
Q ss_pred CCCChhhhhhccCCCCCcCHHHHHHHHHHHHHHHHHHHcCCCCCeEeeccCCCCEEeCCCCcEEEecccCccccCCCC--
Q 008707 314 HNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEEDL-- 391 (557)
Q Consensus 314 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfgla~~~~~~~-- 391 (557)
++++|.+++... ...+++..++.++.||+.||+|||+ .+++||||||+||+++ ++.+||+|||++.......
T Consensus 112 ~~~~L~~~l~~~--~~~~~~~~~~~i~~qi~~al~~lH~---~~i~H~dlkp~NIl~~-~~~~~l~Dfg~~~~~~~~~~~ 185 (319)
T 2y4i_B 112 KGRTLYSVVRDA--KIVLDVNKTRQIAQEIVKGMGYLHA---KGILHKDLKSKNVFYD-NGKVVITDFGLFSISGVLQAG 185 (319)
T ss_dssp CSEEHHHHTTSS--CCCCCSHHHHHHHHHHHHHHHHHHH---TTCCCCCCCSTTEEEC---CCEECCCSCCC--------
T ss_pred cCCcHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHh---CCccccCCChhhEEEe-CCCEEEeecCCcccccccccc
Confidence 999999999752 4468899999999999999999998 9999999999999998 6899999999987643211
Q ss_pred --ccccccccCCCCccCCcccCC---------CCCCcccceehhHHHHHHHHhCCCCCCCCCccccccHHHHHHHHHhcC
Q 008707 392 --THISSVARGTVGYLDPEYYGN---------QQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKG 460 (557)
Q Consensus 392 --~~~~~~~~g~~~y~aPE~l~~---------~~~s~~~DvwslG~ll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~ 460 (557)
........|++.|+|||.+.+ ..++.++||||||+++|+|++|+.||....... ....+..+
T Consensus 186 ~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~-------~~~~~~~~ 258 (319)
T 2y4i_B 186 RREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQPAEA-------IIWQMGTG 258 (319)
T ss_dssp --CCSCBCCSGGGGTSCHHHHSCBSCC--CCCSCCCHHHHHHHHHHHHHHHHHSSCSSSSCCHHH-------HHHHHHTT
T ss_pred ccccccccCCCcccccChHHhhhccccccccccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH-------HHHHhccC
Confidence 111223458899999999864 457889999999999999999999997433211 11122222
Q ss_pred CccccccccccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhhhhh
Q 008707 461 DVISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKIE 514 (557)
Q Consensus 461 ~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~evl~~L~~~~~~~ 514 (557)
........ ..+..+.+++.+||+.+|++|||++||++.|+++....
T Consensus 259 ~~~~~~~~--------~~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~l~~~~ 304 (319)
T 2y4i_B 259 MKPNLSQI--------GMGKEISDILLFCWAFEQEERPTFTKLMDMLEKLPKRN 304 (319)
T ss_dssp CCCCCCCS--------SCCTTHHHHHHHHHCSSTTTSCCHHHHHHHHTTC----
T ss_pred CCCCCCcC--------CCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHhh
Confidence 22111111 11235789999999999999999999999999988754
No 225
>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A
Probab=100.00 E-value=2.8e-38 Score=315.05 Aligned_cols=250 Identities=24% Similarity=0.392 Sum_probs=191.6
Q ss_pred HHHHhhcccCCCCceEEEEEEEc-CCcEEEEEEccCccchhHHHHHHHHHHHhhcCCCCccceeeEEEe-----------
Q 008707 235 ATNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCSHRTQQFVTEVALLSRIHHRNLVPLIGYCEE----------- 302 (557)
Q Consensus 235 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~----------- 302 (557)
..|++.+.||+|+||.||+|... +++.||+|++... ....+.+.+|+++++.++||||+++++++.+
T Consensus 6 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~ 84 (303)
T 1zy4_A 6 SDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHT-EEKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKPMTAV 84 (303)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEEE-HHHHHHHHHHHHHHTTCCCTTBCCEEEEEEECCCCCC-----
T ss_pred ccchhhheeccCCcEEEEEEEEcCCCeEEEEEEEecc-HHHHHHHHHHHHHHHhcCchHHHHHHHHHHhhcchhhhhccc
Confidence 34567899999999999999875 6899999998643 3445778899999999999999999998754
Q ss_pred --cCeeEEEEEecCCCChhhhhhccCCCCCcCHHHHHHHHHHHHHHHHHHHcCCCCCeEeeccCCCCEEeCCCCcEEEec
Q 008707 303 --EHQRILVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSD 380 (557)
Q Consensus 303 --~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~D 380 (557)
.+..++||||+++|+|.+++... ...+++..++.++.|++.||+|||+ .+++||||||+||+++.++.+||+|
T Consensus 85 ~~~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~i~~qi~~~l~~LH~---~~i~H~dlkp~Nil~~~~~~~kl~d 159 (303)
T 1zy4_A 85 KKKSTLFIQMEYCENGTLYDLIHSE--NLNQQRDEYWRLFRQILEALSYIHS---QGIIHRDLKPMNIFIDESRNVKIGD 159 (303)
T ss_dssp -CEEEEEEEEECCCSCBHHHHHHHS--CGGGCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECTTSCEEECC
T ss_pred ccCCceEEEEecCCCCCHHHhhhcc--ccccchHHHHHHHHHHHHHHHHHHh---CCeecccCCHHhEEEcCCCCEEEee
Confidence 45689999999999999999752 4567888999999999999999998 9999999999999999999999999
Q ss_pred ccCccccCCCC-------------ccccccccCCCCccCCcccCCC-CCCcccceehhHHHHHHHHhCCCCCCCCCcccc
Q 008707 381 FGLSRQAEEDL-------------THISSVARGTVGYLDPEYYGNQ-QLTEKSDVYSFGVVLLELISGKKPVSVEDFGAE 446 (557)
Q Consensus 381 fgla~~~~~~~-------------~~~~~~~~g~~~y~aPE~l~~~-~~s~~~DvwslG~ll~elltg~~pf~~~~~~~~ 446 (557)
||++....... ........|++.|+|||.+.+. .++.++||||||+++|+|++ ||....
T Consensus 160 fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~---p~~~~~---- 232 (303)
T 1zy4_A 160 FGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY---PFSTGM---- 232 (303)
T ss_dssp CCCCSCTTC-------------------------CTTSCHHHHTSCSCCCTHHHHHHHHHHHHHHHS---CCSSHH----
T ss_pred CcchhhcccccchhccccccccccccccccCCCcccccCcccccCCCCCcchhhHHHHHHHHHHHHh---ccCCch----
Confidence 99998754321 1112234589999999999764 68999999999999999998 554111
Q ss_pred ccHHHHHHHHHhcCCccccccccccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 008707 447 LNIVHWARSMIKKGDVISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 505 (557)
Q Consensus 447 ~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~evl~ 505 (557)
...... ..+..... .+........+..+.+++.+||+.||++|||+.|+++
T Consensus 233 -~~~~~~-~~~~~~~~------~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~ 283 (303)
T 1zy4_A 233 -ERVNIL-KKLRSVSI------EFPPDFDDNKMKVEKKIIRLLIDHDPNKRPGARTLLN 283 (303)
T ss_dssp -HHHHHH-HHHHSTTC------CCCTTCCTTTSHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred -hHHHHH-Hhcccccc------ccCccccccchHHHHHHHHHHHhcCcccCcCHHHHhC
Confidence 111111 11221111 1112222333456889999999999999999999986
No 226
>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A
Probab=100.00 E-value=4.2e-38 Score=323.76 Aligned_cols=261 Identities=20% Similarity=0.304 Sum_probs=198.4
Q ss_pred HHHHhhcccCCCCceEEEEEEEc-CCcEEEEEEccCccchhHHHHHHHHHHHhhcC-----------CCCccceeeEEEe
Q 008707 235 ATNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCSHRTQQFVTEVALLSRIH-----------HRNLVPLIGYCEE 302 (557)
Q Consensus 235 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~il~~l~-----------h~nIv~~~~~~~~ 302 (557)
..|++.+.||+|+||.||+|... +++.||+|++... ....+.+.+|++++++++ ||||+++++++..
T Consensus 19 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~i~~~~~~~~~ 97 (373)
T 1q8y_A 19 ARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGD-KVYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFNH 97 (373)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEEE
T ss_pred CeEEEEEeeeecCCeEEEEEEecCCCcEEEEEEecCC-ccchhhhhHHHHHHHHhhcccccchhccccchHHHHHHHhhc
Confidence 45667899999999999999874 6899999998753 334567888999999886 8999999999876
Q ss_pred cC----eeEEEEEecCCCChhhhhhccCCCCCcCHHHHHHHHHHHHHHHHHHHcCCCC-CeEeeccCCCCEEeC------
Q 008707 303 EH----QRILVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNP-GIIHRDVKSSNILLD------ 371 (557)
Q Consensus 303 ~~----~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~-~ivH~dlk~~NIll~------ 371 (557)
.+ ..++|||++ +++|.+++... ....+++..+..++.||+.||+|||+ + +|+||||||+|||++
T Consensus 98 ~~~~~~~~~lv~e~~-~~~L~~~~~~~-~~~~~~~~~~~~i~~qi~~aL~~lH~---~~~ivH~Dikp~NIll~~~~~~~ 172 (373)
T 1q8y_A 98 KGPNGVHVVMVFEVL-GENLLALIKKY-EHRGIPLIYVKQISKQLLLGLDYMHR---RCGIIHTDIKPENVLMEIVDSPE 172 (373)
T ss_dssp EETTEEEEEEEECCC-CEEHHHHHHHT-TTSCCCHHHHHHHHHHHHHHHHHHHH---TTCEECSCCSGGGEEEEEEETTT
T ss_pred cCCCCceEEEEEecC-CCCHHHHHHHh-hccCCcHHHHHHHHHHHHHHHHHHHh---cCCEEecCCChHHeEEeccCCCc
Confidence 54 789999999 89999999754 24558999999999999999999998 7 999999999999994
Q ss_pred CCCcEEEecccCccccCCCCccccccccCCCCccCCcccCCCCCCcccceehhHHHHHHHHhCCCCCCCCCccccccHHH
Q 008707 372 INMRAKVSDFGLSRQAEEDLTHISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVH 451 (557)
Q Consensus 372 ~~~~~kl~Dfgla~~~~~~~~~~~~~~~g~~~y~aPE~l~~~~~s~~~DvwslG~ll~elltg~~pf~~~~~~~~~~~~~ 451 (557)
..+.+||+|||++....... ....||+.|+|||++.+..++.++||||||+++|||+||+.||.............
T Consensus 173 ~~~~~kl~Dfg~a~~~~~~~----~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~ 248 (373)
T 1q8y_A 173 NLIQIKIADLGNACWYDEHY----TNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDD 248 (373)
T ss_dssp TEEEEEECCCTTCEETTBCC----CSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC---------CHHH
T ss_pred CcceEEEcccccccccCCCC----CCCCCCccccCcHHHhCCCCCchHhHHHHHHHHHHHHhCCCCCCCCcccccCChHH
Confidence 44579999999998765432 22358999999999999999999999999999999999999998554322111111
Q ss_pred HH---HHHHhc--------CCc----------cccccc--------c--ccCCCCHHHHHHHHHHHHHccccCCCCCCCH
Q 008707 452 WA---RSMIKK--------GDV----------ISIVDP--------V--LIGNVKIESIWRIAEVAIQCVEQRGFSRPKM 500 (557)
Q Consensus 452 ~~---~~~~~~--------~~~----------~~~~d~--------~--l~~~~~~~~~~~l~~li~~cl~~~P~~RPt~ 500 (557)
.+ ...+.. +.. ...+.. . -....+......+.+++.+||+.||++|||+
T Consensus 249 ~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~ 328 (373)
T 1q8y_A 249 HIAQIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADA 328 (373)
T ss_dssp HHHHHHHHHCSCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHHHHTTCCCHHHHHHHHHHHGGGGCSSTTTCBCH
T ss_pred HHHHHHHhcCCCCHHHHhccchhhhhcCCcchhcccccccccchhhhhhhcccCCcchHHHHHHHHHHHhccCccccCCH
Confidence 11 111110 000 000000 0 0112345677889999999999999999999
Q ss_pred HHHHH
Q 008707 501 QEIVL 505 (557)
Q Consensus 501 ~evl~ 505 (557)
+|+++
T Consensus 329 ~ell~ 333 (373)
T 1q8y_A 329 GGLVN 333 (373)
T ss_dssp HHHHT
T ss_pred HHHhh
Confidence 99987
No 227
>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*
Probab=100.00 E-value=3.2e-38 Score=316.80 Aligned_cols=250 Identities=23% Similarity=0.335 Sum_probs=193.6
Q ss_pred HHHHhhcccCCCCceEEEEEEEcCCcEEEEEEccCc--cchhHHHHHHHHHHHhhcC--CCCccceeeEEEecCeeEEEE
Q 008707 235 ATNNFCKKIGKGSFGSVYYGKMKDGKEVAVKIMADS--CSHRTQQFVTEVALLSRIH--HRNLVPLIGYCEEEHQRILVY 310 (557)
Q Consensus 235 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~il~~l~--h~nIv~~~~~~~~~~~~~lv~ 310 (557)
..|++.+.||+|+||.||++...+++.||+|++... .....+.+.+|++++++++ ||||+++++++.+.+..++||
T Consensus 28 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~ 107 (313)
T 3cek_A 28 RIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVM 107 (313)
T ss_dssp EEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECSSCCHHHHHHHHHHHHHHHHHGGGCTTBCCEEEEEECSSEEEEEE
T ss_pred ceEEEEEEecCCCCEEEEEEEcCCCcEEEEEEeccccccccchHHHHHHHHHHHhccccCCceEEEEEEeecCCEEEEEE
Confidence 345567899999999999999988999999998643 2334577899999999997 599999999999999999999
Q ss_pred EecCCCChhhhhhccCCCCCcCHHHHHHHHHHHHHHHHHHHcCCCCCeEeeccCCCCEEeCCCCcEEEecccCccccCCC
Q 008707 311 EYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEED 390 (557)
Q Consensus 311 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfgla~~~~~~ 390 (557)
| +.+++|.+++.. ...+++..+..++.|+++||+|||+ .+++||||||+||+++ ++.+||+|||++......
T Consensus 108 e-~~~~~L~~~l~~---~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~dlkp~NIl~~-~~~~kL~Dfg~~~~~~~~ 179 (313)
T 3cek_A 108 E-CGNIDLNSWLKK---KKSIDPWERKSYWKNMLEAVHTIHQ---HGIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPD 179 (313)
T ss_dssp C-CCSEEHHHHHHH---CSSCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEEE-TTEEEECCCSSSCC----
T ss_pred e-cCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHH---CCceecCCCcccEEEE-CCeEEEeeccccccccCc
Confidence 9 568899999974 4568999999999999999999998 9999999999999996 489999999999876443
Q ss_pred Ccc-ccccccCCCCccCCcccCC-----------CCCCcccceehhHHHHHHHHhCCCCCCCCCccccccHHHHHHHHHh
Q 008707 391 LTH-ISSVARGTVGYLDPEYYGN-----------QQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIK 458 (557)
Q Consensus 391 ~~~-~~~~~~g~~~y~aPE~l~~-----------~~~s~~~DvwslG~ll~elltg~~pf~~~~~~~~~~~~~~~~~~~~ 458 (557)
... ......|++.|+|||.+.+ ..++.++||||||+++|+|++|+.||..... ..........
T Consensus 180 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~-----~~~~~~~~~~ 254 (313)
T 3cek_A 180 TTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIIN-----QISKLHAIID 254 (313)
T ss_dssp ----------CCGGGCCHHHHTTCC----------CCCHHHHHHHHHHHHHHHHHSSCTTTTCCS-----HHHHHHHHHC
T ss_pred cccccccCCCCCCCcCCHHHHhhcccccccccccccCCchHHHHHHHHHHHHHHhCCCchhhHHH-----HHHHHHHHHh
Confidence 221 1223458999999999875 4678899999999999999999999973221 1111222222
Q ss_pred cCCccccccccccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 008707 459 KGDVISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLA 506 (557)
Q Consensus 459 ~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~evl~~ 506 (557)
..... ..+......+.+++.+||+.||++|||++|+++.
T Consensus 255 ~~~~~---------~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~h 293 (313)
T 3cek_A 255 PNHEI---------EFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAH 293 (313)
T ss_dssp TTSCC---------CCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred ccccc---------CCcccchHHHHHHHHHHccCCcccCcCHHHHhcC
Confidence 11111 1111113468899999999999999999999863
No 228
>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...
Probab=100.00 E-value=1.1e-38 Score=333.33 Aligned_cols=257 Identities=24% Similarity=0.267 Sum_probs=190.4
Q ss_pred HHhhcccCCCCceEEEEEEEc-CCcEEEEEEccCccchhHHHHHHHHHHHhhcCCCCccceeeEEEec------CeeEEE
Q 008707 237 NNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCSHRTQQFVTEVALLSRIHHRNLVPLIGYCEEE------HQRILV 309 (557)
Q Consensus 237 ~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~------~~~~lv 309 (557)
|++.+.||+|+||.||+|.+. +|+.||||++..... ...+|+++++.++||||+++++++... ...++|
T Consensus 56 y~~~~~lG~G~fg~Vy~~~~~~~~~~vaiK~~~~~~~----~~~~E~~il~~l~hpniv~l~~~~~~~~~~~~~~~~~lv 131 (420)
T 1j1b_A 56 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKR----FKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLV 131 (420)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECCTT----SCCHHHHHHHTCCCTTBCCEEEEEEEEETTTTEEEEEEE
T ss_pred EEeeeEEeeCCCEEEEEEEECCCCcEEEEEEecccch----hHHHHHHHHHHcCCCCccceeeEEeccCCCCcceeEEee
Confidence 456789999999999999986 589999999865322 234699999999999999999988542 236799
Q ss_pred EEecCCCChhhhhhcc-CCCCCcCHHHHHHHHHHHHHHHHHHHcCCCCCeEeeccCCCCEEeCCC-CcEEEecccCcccc
Q 008707 310 YEYMHNGTLRDRLHGS-VNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDIN-MRAKVSDFGLSRQA 387 (557)
Q Consensus 310 ~e~~~~gsL~~~l~~~-~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~dlk~~NIll~~~-~~~kl~Dfgla~~~ 387 (557)
|||+++ ++.+.+... .....+++..+..++.||++||+|||+ .+|+||||||+|||++.+ +.+||+|||+++..
T Consensus 132 ~e~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~---~~ivHrDlkp~NILl~~~~~~~kl~DFG~a~~~ 207 (420)
T 1j1b_A 132 LDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL 207 (420)
T ss_dssp EECCCE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHT---TTEECSCCSGGGEEEETTTTEEEECCCTTCEEC
T ss_pred hhcccc-cHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHH---CCccccCCChhhEEEeCCCCeEEeccchhhhhc
Confidence 999975 666655421 235679999999999999999999998 999999999999999965 56899999999876
Q ss_pred CCCCccccccccCCCCccCCcccCCC-CCCcccceehhHHHHHHHHhCCCCCCCCCccccccHHHHHHH-------HHh-
Q 008707 388 EEDLTHISSVARGTVGYLDPEYYGNQ-QLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARS-------MIK- 458 (557)
Q Consensus 388 ~~~~~~~~~~~~g~~~y~aPE~l~~~-~~s~~~DvwslG~ll~elltg~~pf~~~~~~~~~~~~~~~~~-------~~~- 458 (557)
..... .....||+.|+|||++.+. .++.++|||||||++|||++|+.||.+.+..+ .+.+.+.. .+.
T Consensus 208 ~~~~~--~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~~--~l~~i~~~lg~p~~~~~~~ 283 (420)
T 1j1b_A 208 VRGEP--NVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVD--QLVEIIKVLGTPTREQIRE 283 (420)
T ss_dssp CTTCC--CCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH--HHHHHHHHHCSCCHHHHHH
T ss_pred ccCCC--ceeeeeCCCcCCHHHHcCCCCCCchhhhHHHHHHHHHHHhCCCCCCCCCHHH--HHHHHHHHhCCCCHHHHHh
Confidence 44322 2234589999999998765 78999999999999999999999998544221 11111110 000
Q ss_pred -cCCccccccccccCC-----CCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 008707 459 -KGDVISIVDPVLIGN-----VKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 505 (557)
Q Consensus 459 -~~~~~~~~d~~l~~~-----~~~~~~~~l~~li~~cl~~~P~~RPt~~evl~ 505 (557)
.........+.+... +....+..+.+++.+||..||++|||+.|+++
T Consensus 284 ~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~Li~~~L~~dP~~R~t~~e~l~ 336 (420)
T 1j1b_A 284 MNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACA 336 (420)
T ss_dssp HCSCCCCCCCCCCCCCCHHHHSCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred hChhhhhhccCccCCCCHHHhcCCCCCHHHHHHHHHhccCChhHCCCHHHHhC
Confidence 000111111111000 11122357889999999999999999999986
No 229
>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}
Probab=100.00 E-value=2.1e-38 Score=318.56 Aligned_cols=255 Identities=21% Similarity=0.286 Sum_probs=189.6
Q ss_pred HHhhcccCCCCceEEEEEEEcC-CcEEEEEEccCccchhHHHHHHHHHHHhhcCCCCccceeeEEE--------------
Q 008707 237 NNFCKKIGKGSFGSVYYGKMKD-GKEVAVKIMADSCSHRTQQFVTEVALLSRIHHRNLVPLIGYCE-------------- 301 (557)
Q Consensus 237 ~~~~~~lG~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~-------------- 301 (557)
|++.+.||+|+||.||+|.... ++.||+|++........+.+.+|+++++.++||||+++++++.
T Consensus 13 y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~~~ 92 (320)
T 2i6l_A 13 YMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTDDVGSLT 92 (320)
T ss_dssp EEEEEECC-----CEEEEEETTTTEEEEEEEEECCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEECTTSCBCCC----CC
T ss_pred eeEEEEeccCCCeEEEEEEECCCCeEEEEEEEecCChHHHHHHHHHHHHHHhcCCCCeeEEEEecccccccccccccccc
Confidence 4567899999999999998874 8999999987665566678999999999999999999999873
Q ss_pred ecCeeEEEEEecCCCChhhhhhccCCCCCcCHHHHHHHHHHHHHHHHHHHcCCCCCeEeeccCCCCEEeC-CCCcEEEec
Q 008707 302 EEHQRILVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLD-INMRAKVSD 380 (557)
Q Consensus 302 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~dlk~~NIll~-~~~~~kl~D 380 (557)
+....++||||+. |+|.+++. ...+++..++.++.|++.||+|||+ .+++||||||+||+++ +++.+||+|
T Consensus 93 ~~~~~~lv~e~~~-~~L~~~~~----~~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dlkp~Nil~~~~~~~~kl~D 164 (320)
T 2i6l_A 93 ELNSVYIVQEYME-TDLANVLE----QGPLLEEHARLFMYQLLRGLKYIHS---ANVLHRDLKPANLFINTEDLVLKIGD 164 (320)
T ss_dssp SCSEEEEEEECCS-EEHHHHHT----TCCCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCSGGGEEEETTTTEEEECC
T ss_pred ccCceeEEeeccC-CCHHHHhh----cCCccHHHHHHHHHHHHHHHHHHHh---CCEecCCCCHHHEEEcCCCCeEEEcc
Confidence 3467899999997 69999886 3568899999999999999999998 9999999999999997 567999999
Q ss_pred ccCccccCCCCc--cccccccCCCCccCCcccCC-CCCCcccceehhHHHHHHHHhCCCCCCCCCccccccHHHHHHHHH
Q 008707 381 FGLSRQAEEDLT--HISSVARGTVGYLDPEYYGN-QQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMI 457 (557)
Q Consensus 381 fgla~~~~~~~~--~~~~~~~g~~~y~aPE~l~~-~~~s~~~DvwslG~ll~elltg~~pf~~~~~~~~~~~~~~~~~~~ 457 (557)
||++........ .......+++.|+|||.+.+ ..++.++||||||+++|||++|+.||...+.... .....
T Consensus 165 fg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~------~~~~~ 238 (320)
T 2i6l_A 165 FGLARIMDPHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELEQ------MQLIL 238 (320)
T ss_dssp CTTCBCC--------CCCGGGSCCTTCCHHHHHCTTCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHH------HHHHH
T ss_pred CccccccCCCcccccccccccccccccCcHHhcCcccCCchhhhHhHHHHHHHHHhCCCCCCCCCHHHH------HHHHH
Confidence 999987643221 11223347899999998865 6789999999999999999999999985443211 11111
Q ss_pred hcCCc-------------ccccccccc-CCC-----CHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 008707 458 KKGDV-------------ISIVDPVLI-GNV-----KIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 505 (557)
Q Consensus 458 ~~~~~-------------~~~~d~~l~-~~~-----~~~~~~~l~~li~~cl~~~P~~RPt~~evl~ 505 (557)
..... ......... ... ....+..+.+++.+||+.||++|||++|+++
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 305 (320)
T 2i6l_A 239 ESIPVVHEEDRQELLSVIPVYIRNDMTEPHKPLTQLLPGISREAVDFLEQILTFSPMDRLTAEEALS 305 (320)
T ss_dssp HHSCCCCHHHHHHHHTTSCHHHHHHTTSCCCCHHHHSTTCCHHHHHHHHTTSCSSGGGSCCHHHHHT
T ss_pred HhcCCCchhhhhhhhhcCcccccccccCCCCChhHhcchhhHHHHHHHHHHcCCCccccCCHHHHhC
Confidence 10000 000000000 000 0112347889999999999999999999986
No 230
>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*
Probab=100.00 E-value=5.3e-38 Score=324.29 Aligned_cols=200 Identities=28% Similarity=0.317 Sum_probs=169.3
Q ss_pred HHHHhhcccCCCCceEEEEEEEc-CCcEEEEEEccCccchhHHHHHHHHHHHhhcC-CC-----CccceeeEEEecCeeE
Q 008707 235 ATNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCSHRTQQFVTEVALLSRIH-HR-----NLVPLIGYCEEEHQRI 307 (557)
Q Consensus 235 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~il~~l~-h~-----nIv~~~~~~~~~~~~~ 307 (557)
..|++.+.||+|+||.||+|... +++.||||++... ......+..|+++++.++ |+ +|+++++++...+..+
T Consensus 54 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~~ 132 (382)
T 2vx3_A 54 DRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNK-KAFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFMFRNHLC 132 (382)
T ss_dssp TTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSS-HHHHHHHHHHHHHHHHHHHCSSGGGGGBCCEEEEEEETTEEE
T ss_pred eeEEEEEEEeecCCEEEEEEEEcCCCcEEEEEEEecc-HHHHHHHHHHHHHHHHHHhcccccceeEEEeeeeeccCCceE
Confidence 45567899999999999999876 5789999998753 233466778999998885 55 4999999999999999
Q ss_pred EEEEecCCCChhhhhhccCCCCCcCHHHHHHHHHHHHHHHHHHHcCCCCCeEeeccCCCCEEeC--CCCcEEEecccCcc
Q 008707 308 LVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLD--INMRAKVSDFGLSR 385 (557)
Q Consensus 308 lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~dlk~~NIll~--~~~~~kl~Dfgla~ 385 (557)
+||||+. ++|.+++... ....+++..+..++.|++.||+|||+. +.+|+||||||+|||++ .++.+||+|||++.
T Consensus 133 lv~e~~~-~~L~~~l~~~-~~~~~~~~~~~~i~~qi~~al~~lH~~-~~~ivHrDlkp~NIll~~~~~~~~kL~DFG~a~ 209 (382)
T 2vx3_A 133 LVFEMLS-YNLYDLLRNT-NFRGVSLNLTRKFAQQMCTALLFLATP-ELSIIHCDLKPENILLCNPKRSAIKIVDFGSSC 209 (382)
T ss_dssp EEEECCC-CBHHHHHHHT-TTSCCCHHHHHHHHHHHHHHHHHHTST-TTCEECCCCSGGGEEESSTTSCCEEECCCTTCE
T ss_pred EEEecCC-CCHHHHHhhc-CcCCCCHHHHHHHHHHHHHHHHHhccC-CCCEEcCCCCcccEEEecCCCCcEEEEeccCce
Confidence 9999995 5999998754 235689999999999999999999951 27999999999999995 47789999999998
Q ss_pred ccCCCCccccccccCCCCccCCcccCCCCCCcccceehhHHHHHHHHhCCCCCCCCC
Q 008707 386 QAEEDLTHISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVED 442 (557)
Q Consensus 386 ~~~~~~~~~~~~~~g~~~y~aPE~l~~~~~s~~~DvwslG~ll~elltg~~pf~~~~ 442 (557)
...... ....||+.|+|||++.+..++.++|||||||++|||+||+.||...+
T Consensus 210 ~~~~~~----~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~ 262 (382)
T 2vx3_A 210 QLGQRI----YQYIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGAN 262 (382)
T ss_dssp ETTCCC----CSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred eccccc----ccccCCccccChHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC
Confidence 765432 23458999999999999999999999999999999999999998554
No 231
>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*
Probab=100.00 E-value=5.2e-38 Score=311.23 Aligned_cols=253 Identities=26% Similarity=0.338 Sum_probs=202.3
Q ss_pred HHHHHHHHhhcccCCCCceEEEEEEEc-CCcEEEEEEccCcc--chhHHHHHHHHHHHhhcCCCCccceeeEEEecCeeE
Q 008707 231 ELEEATNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSC--SHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRI 307 (557)
Q Consensus 231 ~~~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~ 307 (557)
+.....|++.+.||+|+||.||+|... +++.||+|++.... ....+.+.+|++++++++||||+++++++.+.+..+
T Consensus 18 ~~~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~ 97 (287)
T 2wei_A 18 GTFAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFY 97 (287)
T ss_dssp HHHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGBSSSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEE
T ss_pred HHHhhcceeeEEEcCCCCEEEEEEEEcCCCcEEEEEEecccccchHHHHHHHHHHHHHHhccCCCccEEEEEEeCCCeEE
Confidence 344567778899999999999999876 68999999986432 234577899999999999999999999999999999
Q ss_pred EEEEecCCCChhhhhhccCCCCCcCHHHHHHHHHHHHHHHHHHHcCCCCCeEeeccCCCCEEeCCC---CcEEEecccCc
Q 008707 308 LVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDIN---MRAKVSDFGLS 384 (557)
Q Consensus 308 lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~dlk~~NIll~~~---~~~kl~Dfgla 384 (557)
+||||+++++|.+.+.. ...+++..++.++.|++.||+|||+ .+++||||||+||+++.+ +.+||+|||++
T Consensus 98 lv~e~~~~~~L~~~l~~---~~~~~~~~~~~i~~qi~~~l~~LH~---~~i~H~dl~p~NIlv~~~~~~~~~kL~Dfg~~ 171 (287)
T 2wei_A 98 IVGELYTGGELFDEIIK---RKRFSEHDAARIIKQVFSGITYMHK---HNIVHRDLKPENILLESKEKDCDIKIIDFGLS 171 (287)
T ss_dssp EEECCCCSCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEESCSSTTCCEEECSTTGG
T ss_pred EEEEccCCCCHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHH---CCeeccCCChhhEEEecCCCcccEEEeccCcc
Confidence 99999999999998864 3468999999999999999999998 999999999999999754 46999999999
Q ss_pred cccCCCCccccccccCCCCccCCcccCCCCCCcccceehhHHHHHHHHhCCCCCCCCCccccccHHHHHHHHHhcCCccc
Q 008707 385 RQAEEDLTHISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVIS 464 (557)
Q Consensus 385 ~~~~~~~~~~~~~~~g~~~y~aPE~l~~~~~s~~~DvwslG~ll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 464 (557)
......... ....+++.|+|||.+.+. ++.++||||||+++|+|++|+.||...+.. +. ...+..+....
T Consensus 172 ~~~~~~~~~--~~~~~~~~y~aPE~~~~~-~~~~~Di~slG~~l~~l~~g~~p~~~~~~~------~~-~~~~~~~~~~~ 241 (287)
T 2wei_A 172 TCFQQNTKM--KDRIGTAYYIAPEVLRGT-YDEKCDVWSAGVILYILLSGTPPFYGKNEY------DI-LKRVETGKYAF 241 (287)
T ss_dssp GTBCCCSSC--SCHHHHHTTCCHHHHTTC-CCTHHHHHHHHHHHHHHHHSSCSSCCSSHH------HH-HHHHHHCCCCC
T ss_pred eeecCCCcc--ccccCcccccChHHhcCC-CCCchhhHhHHHHHHHHHhCCCCCCCCCHH------HH-HHHHHcCCCCC
Confidence 876443221 223478899999998764 889999999999999999999999744321 11 12222222211
Q ss_pred cccccccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 008707 465 IVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 505 (557)
Q Consensus 465 ~~d~~l~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~evl~ 505 (557)
.. ..... .+..+.+++.+||+.||++|||+.|+++
T Consensus 242 ~~--~~~~~----~~~~~~~li~~~l~~dp~~Rps~~ell~ 276 (287)
T 2wei_A 242 DL--PQWRT----ISDDAKDLIRKMLTFHPSLRITATQCLE 276 (287)
T ss_dssp CS--GGGTT----SCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred Cc--hhhhh----cCHHHHHHHHHHcccChhhCcCHHHHhc
Confidence 00 00111 2346889999999999999999999987
No 232
>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B
Probab=100.00 E-value=2.7e-38 Score=318.97 Aligned_cols=260 Identities=21% Similarity=0.274 Sum_probs=197.2
Q ss_pred HHHhhcccCCCCceEEEEEEE--cCCcEEEEEEccCccc--hhHHHHHHHHHHHhhc---CCCCccceeeEEE-----ec
Q 008707 236 TNNFCKKIGKGSFGSVYYGKM--KDGKEVAVKIMADSCS--HRTQQFVTEVALLSRI---HHRNLVPLIGYCE-----EE 303 (557)
Q Consensus 236 ~~~~~~~lG~G~~g~Vy~~~~--~~~~~vavK~~~~~~~--~~~~~~~~E~~il~~l---~h~nIv~~~~~~~-----~~ 303 (557)
.|++.+.||+|+||.||+|.. .+++.||+|++..... .....+.+|+.+++.+ +||||+++++++. ..
T Consensus 12 ~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~ 91 (326)
T 1blx_A 12 QYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDRE 91 (326)
T ss_dssp TEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEECSSE
T ss_pred ceeeeeeecccccEEEEEEEecCCCCEEEEEEEeccCcccccCCchhhHHHHHHHhhhccCCCCeEeeeeeeeecccCCC
Confidence 355678999999999999987 3588999999864322 1223566788877776 7999999999987 55
Q ss_pred CeeEEEEEecCCCChhhhhhccCCCCCcCHHHHHHHHHHHHHHHHHHHcCCCCCeEeeccCCCCEEeCCCCcEEEecccC
Q 008707 304 HQRILVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGL 383 (557)
Q Consensus 304 ~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfgl 383 (557)
...++||||+. |+|.+++... ....+++..+..++.|++.||+|||+ .|++||||||+||+++.++.+||+|||+
T Consensus 92 ~~~~lv~e~~~-~~L~~~l~~~-~~~~~~~~~~~~~~~qi~~~l~~lH~---~gi~H~dlkp~Nili~~~~~~kl~Dfg~ 166 (326)
T 1blx_A 92 TKLTLVFEHVD-QDLTTYLDKV-PEPGVPTETIKDMMFQLLRGLDFLHS---HRVVHRDLKPQNILVTSSGQIKLADFGL 166 (326)
T ss_dssp EEEEEEEECCS-CBHHHHHHHS-CTTCSCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTCCEEECSCCS
T ss_pred ceEEEEEecCC-CCHHHHHHhc-ccCCCCHHHHHHHHHHHHHHHHHHHH---CCceeccCCHHHeEEcCCCCEEEecCcc
Confidence 67899999997 6999998754 24458999999999999999999998 9999999999999999999999999999
Q ss_pred ccccCCCCccccccccCCCCccCCcccCCCCCCcccceehhHHHHHHHHhCCCCCCCCCccccccHHHHHHHHHhcCCcc
Q 008707 384 SRQAEEDLTHISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVI 463 (557)
Q Consensus 384 a~~~~~~~~~~~~~~~g~~~y~aPE~l~~~~~s~~~DvwslG~ll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 463 (557)
+....... ......|++.|+|||.+.+..++.++||||||+++|+|++|+.||...+... ....+..........
T Consensus 167 ~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~---~~~~i~~~~~~~~~~ 241 (326)
T 1blx_A 167 ARIYSFQM--ALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVD---QLGKILDVIGLPGEE 241 (326)
T ss_dssp CCCCCGGG--GGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH---HHHHHHHHHCCCCGG
T ss_pred cccccCCC--CccccccccceeCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHH---HHHHHHHHcCCCCcc
Confidence 98764332 2233458999999999999999999999999999999999999998543221 111111111110000
Q ss_pred ccc----------c---ccccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 008707 464 SIV----------D---PVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 505 (557)
Q Consensus 464 ~~~----------d---~~l~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~evl~ 505 (557)
... . ...........+..+.+++.+||+.||++|||+.|+++
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 296 (326)
T 1blx_A 242 DWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALS 296 (326)
T ss_dssp GSCTTCSSCGGGSCCCCCCCGGGTCCSCCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred cCccccccchhhhcccCcchhhhccccCCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence 000 0 00000111123346889999999999999999999985
No 233
>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}
Probab=100.00 E-value=2e-38 Score=324.70 Aligned_cols=262 Identities=19% Similarity=0.241 Sum_probs=184.6
Q ss_pred HHHHhhcccCCCCceEEEEEEEc-CCcEEEEEEccCccchhHHHHHHHHHHHhhcCCCCccceeeEEEecCe-------e
Q 008707 235 ATNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCSHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQ-------R 306 (557)
Q Consensus 235 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~-------~ 306 (557)
..|++.+.||+|+||.||+|.+. +|+.||||++.... .......+|++.+..++||||+++++++...+. .
T Consensus 23 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~~ 101 (360)
T 3e3p_A 23 DRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDP-RFRNRELQIMQDLAVLHHPNIVQLQSYFYTLGERDRRDIYL 101 (360)
T ss_dssp TTEEEC----------CEEEEETTTCCEEEEEEEECCT-TCCCHHHHHHHHHHHHCCTTBCCEEEEEEEECSSCTTCEEE
T ss_pred cceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEecCc-cccHHHHHHHHHHHhcCCCCcccHHHhhhccccccccceeE
Confidence 34556889999999999999875 68999999886532 223456678888899999999999999876433 7
Q ss_pred EEEEEecCCCChhhhhhc-cCCCCCcCHHHHHHHHHHHHHHHHHHH--cCCCCCeEeeccCCCCEEeCC-CCcEEEeccc
Q 008707 307 ILVYEYMHNGTLRDRLHG-SVNQKPLDWLTRLQIAHDAAKGLEYLH--TGCNPGIIHRDVKSSNILLDI-NMRAKVSDFG 382 (557)
Q Consensus 307 ~lv~e~~~~gsL~~~l~~-~~~~~~l~~~~~~~i~~qia~aL~~LH--~~~~~~ivH~dlk~~NIll~~-~~~~kl~Dfg 382 (557)
++||||+++ +|.+.+.. ......+++..+..++.|++.||+||| + .+|+||||||+|||++. ++.+||+|||
T Consensus 102 ~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~---~~ivH~Dlkp~NIll~~~~~~~kl~Dfg 177 (360)
T 3e3p_A 102 NVVMEYVPD-TLHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGCLHLPS---VNVCHRDIKPHNVLVNEADGTLKLCDFG 177 (360)
T ss_dssp EEEEECCSC-BHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHTSTT---TCCBCSCCCGGGEEEETTTTEEEECCCT
T ss_pred EEEeecccc-cHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhCCC---CCeecCcCCHHHEEEeCCCCcEEEeeCC
Confidence 899999976 55443332 224567889999999999999999999 7 99999999999999996 8999999999
Q ss_pred CccccCCCCccccccccCCCCccCCcccCCC-CCCcccceehhHHHHHHHHhCCCCCCCCCccccccHHHHHHHHHhcC-
Q 008707 383 LSRQAEEDLTHISSVARGTVGYLDPEYYGNQ-QLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKG- 460 (557)
Q Consensus 383 la~~~~~~~~~~~~~~~g~~~y~aPE~l~~~-~~s~~~DvwslG~ll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~- 460 (557)
++........ .....||+.|+|||++.+. .++.++||||||+++|+|++|+.||...+.... +.. +.......
T Consensus 178 ~a~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~--~~~-~~~~~~~~~ 252 (360)
T 3e3p_A 178 SAKKLSPSEP--NVAYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSAGQ--LHE-IVRVLGCPS 252 (360)
T ss_dssp TCBCCCTTSC--CCSTTSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH--HHH-HHHHHCCCC
T ss_pred CceecCCCCC--cccccCCcceeCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCcCCCChHHH--HHH-HHHHcCCCC
Confidence 9987654332 2234589999999998665 489999999999999999999999985443221 111 11111000
Q ss_pred -----------Cccccccc------cccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 008707 461 -----------DVISIVDP------VLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLA 506 (557)
Q Consensus 461 -----------~~~~~~d~------~l~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~evl~~ 506 (557)
......+. ....+........+.+++.+||+.||++|||+.|+++.
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 315 (360)
T 3e3p_A 253 REVLRKLNPSHTDVDLYNSKGIPWSNVFSDHSLKDAKEAYDLLSALLQYLPEERMKPYEALCH 315 (360)
T ss_dssp HHHHHHHCTTCCCGGGGCCCCCCHHHHTTTCCCTTHHHHHHHHHHHTCSSGGGSCCHHHHTTS
T ss_pred HHHHHhcccchhhccccccccCCcccccchhhccccHHHHHHHHHHhccCccccCCHHHHhcC
Confidence 00000000 00111122245678999999999999999999999863
No 234
>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A
Probab=100.00 E-value=4.8e-38 Score=323.27 Aligned_cols=254 Identities=21% Similarity=0.307 Sum_probs=192.5
Q ss_pred HHHhhcccCCCCceEEEEEEEc-CCcEEEEEEccCcc--chhHHHHHHHHHHHhhcCCCCccceeeEEEecCee------
Q 008707 236 TNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSC--SHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQR------ 306 (557)
Q Consensus 236 ~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~------ 306 (557)
.|.+.+.||+|+||.||+|... +|+.||+|++.... ....+.+.+|+.+++.++||||+++++++...+..
T Consensus 43 ~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 122 (371)
T 4exu_A 43 TYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFYDF 122 (371)
T ss_dssp TEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSSTTCCCC
T ss_pred cEEEEeEEecCCCeEEEEEEECCCCCEEEEEEecccccchhHHHHHHHHHHHHHhcCCCCchhhhhheeccCCcccceeE
Confidence 4556789999999999999875 58999999987542 23356788999999999999999999999876654
Q ss_pred EEEEEecCCCChhhhhhccCCCCCcCHHHHHHHHHHHHHHHHHHHcCCCCCeEeeccCCCCEEeCCCCcEEEecccCccc
Q 008707 307 ILVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQ 386 (557)
Q Consensus 307 ~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfgla~~ 386 (557)
++||||+. ++|.+.+. ..+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||++..
T Consensus 123 ~lv~e~~~-~~l~~~~~-----~~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dikp~NIll~~~~~~kL~Dfg~a~~ 193 (371)
T 4exu_A 123 YLVMPFMQ-TDLQKIMG-----MEFSEEKIQYLVYQMLKGLKYIHS---AGVVHRDLKPGNLAVNEDCELKILDFGLARH 193 (371)
T ss_dssp EEEEECCC-EEHHHHTT-----SCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECTTCCEEECSTTCC--
T ss_pred EEEEcccc-ccHHHHhh-----cCCCHHHHHHHHHHHHHHHHHHHH---CCCcCCCcCHHHeEECCCCCEEEEecCcccc
Confidence 99999996 68888774 348999999999999999999998 9999999999999999999999999999986
Q ss_pred cCCCCccccccccCCCCccCCcccCC-CCCCcccceehhHHHHHHHHhCCCCCCCCCccccccHHHHHHHHHhcCCcccc
Q 008707 387 AEEDLTHISSVARGTVGYLDPEYYGN-QQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISI 465 (557)
Q Consensus 387 ~~~~~~~~~~~~~g~~~y~aPE~l~~-~~~s~~~DvwslG~ll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 465 (557)
.... .....||+.|+|||.+.+ ..++.++||||||+++|+|++|+.||...+..+. +.. ........ ....
T Consensus 194 ~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~--~~~-i~~~~~~~-~~~~ 265 (371)
T 4exu_A 194 ADAE----MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQ--LTQ-ILKVTGVP-GTEF 265 (371)
T ss_dssp ----------CTTCCCTTSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHH--HHH-HHHHHCCC-CHHH
T ss_pred cccC----cCCcccCccccCHHHhcCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCChHHH--HHH-HHHHhCCC-cHHH
Confidence 5433 223458999999999887 6889999999999999999999999985443211 111 11100000 0000
Q ss_pred c---------------cccccCC---CCHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 008707 466 V---------------DPVLIGN---VKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLA 506 (557)
Q Consensus 466 ~---------------d~~l~~~---~~~~~~~~l~~li~~cl~~~P~~RPt~~evl~~ 506 (557)
. ....... ........+.+++.+||+.||++|||++|+++.
T Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 324 (371)
T 4exu_A 266 VQKLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTH 324 (371)
T ss_dssp HTTCSCHHHHHHHHHSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred HHHhhhhhhhhhhhccCCCcchhHHHhccccChHHHHHHHHHCCCChhhcCCHHHHhcC
Confidence 0 0000000 001123478899999999999999999999864
No 235
>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*
Probab=100.00 E-value=3.6e-38 Score=321.70 Aligned_cols=259 Identities=19% Similarity=0.255 Sum_probs=199.1
Q ss_pred HHHHHhhcccCCCCceEEEEEEEc-CC-cEEEEEEccCccchhHHHHHHHHHHHhhcCCCC------ccceeeEEEecCe
Q 008707 234 EATNNFCKKIGKGSFGSVYYGKMK-DG-KEVAVKIMADSCSHRTQQFVTEVALLSRIHHRN------LVPLIGYCEEEHQ 305 (557)
Q Consensus 234 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~-~~vavK~~~~~~~~~~~~~~~E~~il~~l~h~n------Iv~~~~~~~~~~~ 305 (557)
...|++.+.||+|+||.||+|... ++ +.||+|++... ....+.+.+|+++++.++|++ ++.+++++...+.
T Consensus 18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~ 96 (355)
T 2eu9_A 18 QERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNV-GKYREAARLEINVLKKIKEKDKENKFLCVLMSDWFNFHGH 96 (355)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHHHCTTSCSCBCCEEEEEEETTE
T ss_pred cccEEEEEEeeccCCeEEEEEEecCCCceEEEEEEEccc-ccchhHHHHHHHHHHHHhhcCCCCceeEEEeeeeeeeCCe
Confidence 455677899999999999999875 34 68999998753 334567888999999997665 8999999999999
Q ss_pred eEEEEEecCCCChhhhhhccCCCCCcCHHHHHHHHHHHHHHHHHHHcCCCCCeEeeccCCCCEEe---------------
Q 008707 306 RILVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILL--------------- 370 (557)
Q Consensus 306 ~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~dlk~~NIll--------------- 370 (557)
.++||||+ ++++.+.+... ....+++..+..++.||+.||+|||+ .+|+||||||+|||+
T Consensus 97 ~~lv~e~~-~~~l~~~l~~~-~~~~~~~~~~~~i~~qi~~~L~~lH~---~~ivH~Dlkp~NIll~~~~~~~~~~~~~~~ 171 (355)
T 2eu9_A 97 MCIAFELL-GKNTFEFLKEN-NFQPYPLPHVRHMAYQLCHALRFLHE---NQLTHTDLKPENILFVNSEFETLYNEHKSC 171 (355)
T ss_dssp EEEEEECC-CCBHHHHHHHT-TTCCCCHHHHHHHHHHHHHHHHHHHT---TTEECCCCCGGGEEESCCCEEEEECCC-CC
T ss_pred EEEEEecc-CCChHHHHHhc-cCCCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEEEecccccccccccccc
Confidence 99999999 66777777643 23568999999999999999999998 999999999999999
Q ss_pred ----CCCCcEEEecccCccccCCCCccccccccCCCCccCCcccCCCCCCcccceehhHHHHHHHHhCCCCCCCCCcccc
Q 008707 371 ----DINMRAKVSDFGLSRQAEEDLTHISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAE 446 (557)
Q Consensus 371 ----~~~~~~kl~Dfgla~~~~~~~~~~~~~~~g~~~y~aPE~l~~~~~s~~~DvwslG~ll~elltg~~pf~~~~~~~~ 446 (557)
+.++.+||+|||++....... ....||+.|+|||++.+..++.++||||||+++|||++|+.||...+....
T Consensus 172 ~~~~~~~~~~kl~Dfg~~~~~~~~~----~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~ 247 (355)
T 2eu9_A 172 EEKSVKNTSIRVADFGSATFDHEHH----TTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTHENREH 247 (355)
T ss_dssp CEEEESCCCEEECCCTTCEETTSCC----CSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHH
T ss_pred cccccCCCcEEEeecCccccccccc----cCCcCCCcccCCeeeecCCCCCccchHHHHHHHHHHHhCCCCCCCCCHHHH
Confidence 567889999999998654332 234589999999999999999999999999999999999999985443221
Q ss_pred ccHHHHHHHHHhc--------CCccccc-ccc---------------------ccCCCCHHHHHHHHHHHHHccccCCCC
Q 008707 447 LNIVHWARSMIKK--------GDVISIV-DPV---------------------LIGNVKIESIWRIAEVAIQCVEQRGFS 496 (557)
Q Consensus 447 ~~~~~~~~~~~~~--------~~~~~~~-d~~---------------------l~~~~~~~~~~~l~~li~~cl~~~P~~ 496 (557)
. ..+...... ....... ... ............+.+++.+||+.||++
T Consensus 248 ~---~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~ 324 (355)
T 2eu9_A 248 L---VMMEKILGPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLKSYMLQDSLEHVQLFDLMRRMLEFDPAQ 324 (355)
T ss_dssp H---HHHHHHHCCCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTT
T ss_pred H---HHHHHHcCCCcHHHhhhccchhhhcccccccccccchhccccccCCcccccccccchhHHHHHHHHHHHhcCChhh
Confidence 1 111111110 0000000 000 000112234567899999999999999
Q ss_pred CCCHHHHHH
Q 008707 497 RPKMQEIVL 505 (557)
Q Consensus 497 RPt~~evl~ 505 (557)
|||+.|+++
T Consensus 325 Rpt~~e~l~ 333 (355)
T 2eu9_A 325 RITLAEALL 333 (355)
T ss_dssp SCCHHHHTT
T ss_pred CcCHHHHhc
Confidence 999999985
No 236
>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*
Probab=100.00 E-value=9.8e-39 Score=326.00 Aligned_cols=258 Identities=21% Similarity=0.250 Sum_probs=194.9
Q ss_pred HHhhcccCCCCceEEEEEEEc-CCcEEEEEEccCcc-chhHHHHHHHHHHHhhcCCCCccceeeEEEec-----CeeEEE
Q 008707 237 NNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSC-SHRTQQFVTEVALLSRIHHRNLVPLIGYCEEE-----HQRILV 309 (557)
Q Consensus 237 ~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~-----~~~~lv 309 (557)
|++.+.||+|+||.||+|.+. +|+.||||++.... ......+.+|+++++.++||||+++++++... ...++|
T Consensus 13 y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~lv 92 (353)
T 2b9h_A 13 FQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENIITIFNIQRPDSFENFNEVYII 92 (353)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCSTTCCCEEEE
T ss_pred eEEeeEEcCCCCeEEEEEEECCCCcEEEEEeecccccchHHHHHHHHHHHHHhCcCCCcCCeeeeecccccCccceEEEE
Confidence 456789999999999999876 68899999986533 33456788999999999999999999987654 678999
Q ss_pred EEecCCCChhhhhhccCCCCCcCHHHHHHHHHHHHHHHHHHHcCCCCCeEeeccCCCCEEeCCCCcEEEecccCccccCC
Q 008707 310 YEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEE 389 (557)
Q Consensus 310 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfgla~~~~~ 389 (557)
|||+. ++|.+++.. ..+++..+..++.|++.||+|||+ .|++||||||+||+++.++.+||+|||++.....
T Consensus 93 ~e~~~-~~L~~~~~~----~~~~~~~~~~~~~qi~~~L~~LH~---~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~~~ 164 (353)
T 2b9h_A 93 QELMQ-TDLHRVIST----QMLSDDHIQYFIYQTLRAVKVLHG---SNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDE 164 (353)
T ss_dssp ECCCS-EEHHHHHHH----CCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGGGEEECTTCCEEECCCTTCEECC-
T ss_pred EeccC-ccHHHHHhh----cCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHeEEcCCCcEEEEeccccccccc
Confidence 99996 689998863 468999999999999999999998 9999999999999999999999999999987643
Q ss_pred CCcc---------ccccccCCCCccCCcccCC-CCCCcccceehhHHHHHHHHhCCCCCCCCCccccccHHHHHHHHHhc
Q 008707 390 DLTH---------ISSVARGTVGYLDPEYYGN-QQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKK 459 (557)
Q Consensus 390 ~~~~---------~~~~~~g~~~y~aPE~l~~-~~~s~~~DvwslG~ll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~ 459 (557)
.... ......||+.|+|||++.+ ..++.++||||||+++|+|++|+.||.+.+..... .........
T Consensus 165 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~---~~~~~~~~~ 241 (353)
T 2b9h_A 165 SAADNSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQL---LLIFGIIGT 241 (353)
T ss_dssp ---------------CCCCCCGGGCCHHHHHSCCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHH---HHHHHHHCC
T ss_pred ccccccCccccccchhhccccccccCCeeeccCCCccchhhHHHHHHHHHHHHhCCCCCCCCCcHHHH---HHHHHHhCC
Confidence 2211 1122358999999998754 77899999999999999999999999855432111 111111110
Q ss_pred CCcccccc----c-------cc--cCCC-----CHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 008707 460 GDVISIVD----P-------VL--IGNV-----KIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 505 (557)
Q Consensus 460 ~~~~~~~d----~-------~l--~~~~-----~~~~~~~l~~li~~cl~~~P~~RPt~~evl~ 505 (557)
........ + .+ .... ....+..+.+++.+||+.||++|||++|+++
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 305 (353)
T 2b9h_A 242 PHSDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALE 305 (353)
T ss_dssp CCSTTTTTTCCCHHHHHHHHTSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred CchhccccccccchhhHHhhcccCCCCcchhhhcccCCHHHHHHHHHhcCcCcccCCCHHHHhc
Confidence 00000000 0 00 0000 0122346889999999999999999999987
No 237
>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}
Probab=100.00 E-value=3.8e-38 Score=321.79 Aligned_cols=253 Identities=21% Similarity=0.294 Sum_probs=192.6
Q ss_pred HHhhcccCCCCceEEEEEEEc-CCcEEEEEEccCcc--chhHHHHHHHHHHHhhcCCCCccceeeEEEecCe------eE
Q 008707 237 NNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSC--SHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQ------RI 307 (557)
Q Consensus 237 ~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~------~~ 307 (557)
|.+.+.||+|+||.||+|.+. +|+.||||++.... ....+.+.+|+.+++.++||||+++++++..... .+
T Consensus 26 y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~ 105 (353)
T 3coi_A 26 YVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFYDFY 105 (353)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTTEEEEEEEESSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCCCCE
T ss_pred EEEeeeEecCCCeEEEEEEECCCCCEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCcccHhheEecccccccceeEE
Confidence 445688999999999999875 68999999986532 2335678899999999999999999999987654 49
Q ss_pred EEEEecCCCChhhhhhccCCCCCcCHHHHHHHHHHHHHHHHHHHcCCCCCeEeeccCCCCEEeCCCCcEEEecccCcccc
Q 008707 308 LVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQA 387 (557)
Q Consensus 308 lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfgla~~~ 387 (557)
+||||+. ++|.+++. ..+++..+..++.||+.||+|||+ +|++||||||+||+++.++.+||+|||++...
T Consensus 106 lv~e~~~-~~l~~~~~-----~~~~~~~~~~i~~qi~~al~~LH~---~~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~ 176 (353)
T 3coi_A 106 LVMPFMQ-TDLQKIMG-----LKFSEEKIQYLVYQMLKGLKYIHS---AGVVHRDLKPGNLAVNEDCELKILDFGLARHA 176 (353)
T ss_dssp EEEECCS-EEGGGTTT-----SCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSSCCGGGEEECTTCCEEECSTTCTTC-
T ss_pred EEecccc-CCHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEeECCCCcEEEeecccccCC
Confidence 9999996 68888764 348999999999999999999998 99999999999999999999999999999865
Q ss_pred CCCCccccccccCCCCccCCcccCC-CCCCcccceehhHHHHHHHHhCCCCCCCCCccccccHHHHHHHHHhcCC-----
Q 008707 388 EEDLTHISSVARGTVGYLDPEYYGN-QQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGD----- 461 (557)
Q Consensus 388 ~~~~~~~~~~~~g~~~y~aPE~l~~-~~~s~~~DvwslG~ll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~----- 461 (557)
... .....+|+.|+|||.+.+ ..++.++||||||+++|+|++|+.||...+..+. ...+........
T Consensus 177 ~~~----~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~---~~~i~~~~~~~~~~~~~ 249 (353)
T 3coi_A 177 DAE----MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQ---LTQILKVTGVPGTEFVQ 249 (353)
T ss_dssp -----------CCSBCCSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSSBSSCHHHH---HHHHHHHHCBCCHHHHT
T ss_pred CCC----ccccccCcCcCCHHHHhCcCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH---HHHHHHHhCCCCHHHHH
Confidence 432 223458999999999877 6789999999999999999999999985543211 111111110000
Q ss_pred -------------ccccccccccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 008707 462 -------------VISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLA 506 (557)
Q Consensus 462 -------------~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~evl~~ 506 (557)
......+.+ ..........+.+++.+||+.||++|||++|+++.
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~h 306 (353)
T 3coi_A 250 KLNDKAAKSYIQSLPQTPRKDF-TQLFPRASPQAADLLEKMLELDVDKRLTAAQALTH 306 (353)
T ss_dssp TCSCHHHHHHHHTSCBCSSCCT-TTTCTTSCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred HHhhHHHHHHHHhCcCCCCccH-HHhcCCcCHHHHHHHHHHcCCCcccCCCHHHHhcC
Confidence 000000000 01112234578899999999999999999999863
No 238
>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*
Probab=100.00 E-value=4.8e-38 Score=317.52 Aligned_cols=253 Identities=26% Similarity=0.336 Sum_probs=175.9
Q ss_pred HHhhcccCCCCceEEEEEEEc-CCcEEEEEEccCcc-chhHHHHHHHHH-HHhhcCCCCccceeeEEEecCeeEEEEEec
Q 008707 237 NNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSC-SHRTQQFVTEVA-LLSRIHHRNLVPLIGYCEEEHQRILVYEYM 313 (557)
Q Consensus 237 ~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~-il~~l~h~nIv~~~~~~~~~~~~~lv~e~~ 313 (557)
|++.+.||+|+||.||+|... +|+.||+|++.... ......+..|+. +++.++||||+++++++...+..++||||+
T Consensus 24 y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~h~niv~~~~~~~~~~~~~lv~e~~ 103 (327)
T 3aln_A 24 LKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYGALFREGDCWICMELM 103 (327)
T ss_dssp EEC-CEEEECSSEEEEEEEETTTTEEEEEEEEECCCCHHHHHHHHHHHHHHHSSCCCTTBCCEEEEEECSSEEEEEECCC
T ss_pred hhehheeccCCCEEEEEEEEcCCCCEEEEEEeecccCchHHHHHHHHHHHHHHcCCCCcEeeeeeEEEeCCceEEEEeec
Confidence 345688999999999999885 68999999987543 233445566665 677789999999999999999999999999
Q ss_pred CCCChhhhhhcc--CCCCCcCHHHHHHHHHHHHHHHHHHHcCCCC-CeEeeccCCCCEEeCCCCcEEEecccCccccCCC
Q 008707 314 HNGTLRDRLHGS--VNQKPLDWLTRLQIAHDAAKGLEYLHTGCNP-GIIHRDVKSSNILLDINMRAKVSDFGLSRQAEED 390 (557)
Q Consensus 314 ~~gsL~~~l~~~--~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~-~ivH~dlk~~NIll~~~~~~kl~Dfgla~~~~~~ 390 (557)
.+ +|.+++... .....+++..+..++.|++.||.|||+ . +++||||||+||+++.++.+||+|||++......
T Consensus 104 ~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~---~~~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~~ 179 (327)
T 3aln_A 104 ST-SFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKE---NLKIIHRDIKPSNILLDRSGNIKLCDFGISGQLVDS 179 (327)
T ss_dssp SE-EHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHH---HHSCCCSCCCGGGEEEETTTEEEECCCSSSCC----
T ss_pred CC-ChHHHHHHHHhhhcccCcHHHHHHHHHHHHHHHHHHhc---cCCEeECCCCHHHEEEcCCCCEEEccCCCceecccc
Confidence 75 787776531 125678999999999999999999998 7 9999999999999999999999999999876443
Q ss_pred CccccccccCCCCccCCccc----CCCCCCcccceehhHHHHHHHHhCCCCCCCCCccccccHHHHHHHHHhcCCccccc
Q 008707 391 LTHISSVARGTVGYLDPEYY----GNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIV 466 (557)
Q Consensus 391 ~~~~~~~~~g~~~y~aPE~l----~~~~~s~~~DvwslG~ll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 466 (557)
.. .....|++.|+|||.+ .+..++.++||||||+++|+|++|+.||....... +.... +..+..
T Consensus 180 ~~--~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~-----~~~~~-~~~~~~---- 247 (327)
T 3aln_A 180 IA--KTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSVF-----DQLTQ-VVKGDP---- 247 (327)
T ss_dssp ----------------------------CCSHHHHHHHHHHHHHHHHSCCCSSCC------------CC-CCCSCC----
T ss_pred cc--cccCCCCccccCceeeccccCcCCCCchhhHHHHHHHHHHHHHCCCCCCCcchHH-----HHHHH-HhcCCC----
Confidence 22 1223589999999998 45678999999999999999999999997432110 00000 001111
Q ss_pred cccccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 008707 467 DPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLA 506 (557)
Q Consensus 467 d~~l~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~evl~~ 506 (557)
+.+...........+.+++.+||+.||++|||+.||++.
T Consensus 248 -~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~h 286 (327)
T 3aln_A 248 -PQLSNSEEREFSPSFINFVNLCLTKDESKRPKYKELLKH 286 (327)
T ss_dssp -CCCCCCSSCCCCHHHHHHHHHHTCSSGGGSCCHHHHTTS
T ss_pred -CCCCCcccccCCHHHHHHHHHHhhCChhhCcCHHHHHhC
Confidence 111111111223478899999999999999999999873
No 239
>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*
Probab=100.00 E-value=9.9e-38 Score=327.44 Aligned_cols=247 Identities=24% Similarity=0.343 Sum_probs=184.8
Q ss_pred hcccCCCCceEEEEEEEcCCcEEEEEEccCccchhHHHHHHHHHHHhhc-CCCCccceeeEEEecCeeEEEEEecCCCCh
Q 008707 240 CKKIGKGSFGSVYYGKMKDGKEVAVKIMADSCSHRTQQFVTEVALLSRI-HHRNLVPLIGYCEEEHQRILVYEYMHNGTL 318 (557)
Q Consensus 240 ~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~il~~l-~h~nIv~~~~~~~~~~~~~lv~e~~~~gsL 318 (557)
.+.||+|+||+||.+...+|+.||||++... ..+.+.+|+++++++ +||||+++++++.+.+..++||||+. |+|
T Consensus 20 ~~~LG~G~~g~V~~~~~~~g~~vAvK~~~~~---~~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~lv~E~~~-gsL 95 (434)
T 2rio_A 20 EKILGYGSSGTVVFQGSFQGRPVAVKRMLID---FCDIALMEIKLLTESDDHPNVIRYYCSETTDRFLYIALELCN-LNL 95 (434)
T ss_dssp EEEEEECSTTCEEEEEESSSSEEEEEEEEGG---GHHHHHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEECCCS-EEH
T ss_pred cCeEeeCCCeEEEEEEEECCeEEEEEEEcHH---HHHHHHHHHHHHHhccCCCCcCeEEEEEecCCeEEEEEecCC-CCH
Confidence 4789999999998776677999999998643 235678899999987 89999999999999999999999995 699
Q ss_pred hhhhhccCCCC----CcCHHHHHHHHHHHHHHHHHHHcCCCCCeEeeccCCCCEEeCCC-------------CcEEEecc
Q 008707 319 RDRLHGSVNQK----PLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDIN-------------MRAKVSDF 381 (557)
Q Consensus 319 ~~~l~~~~~~~----~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~dlk~~NIll~~~-------------~~~kl~Df 381 (557)
.+++....... ..++..++.++.||+.||+|||+ .+|+||||||+|||++.+ +.+||+||
T Consensus 96 ~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivHrDLkp~NILl~~~~~~~~~~~~~~~~~~~kL~DF 172 (434)
T 2rio_A 96 QDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHS---LKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDF 172 (434)
T ss_dssp HHHHHTC------------CCHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEEECCHHHHSCCTTCCCSCEEEECCC
T ss_pred HHHHhccCCCchhhhhccchhHHHHHHHHHHHHHHHHH---CCccccCCChHhEEEecCcccccccccCCCceEEEEccc
Confidence 99997532111 11333457899999999999998 999999999999999754 47999999
Q ss_pred cCccccCCCCcc---ccccccCCCCccCCcccCC-------CCCCcccceehhHHHHHHHHh-CCCCCCCCCccccccHH
Q 008707 382 GLSRQAEEDLTH---ISSVARGTVGYLDPEYYGN-------QQLTEKSDVYSFGVVLLELIS-GKKPVSVEDFGAELNIV 450 (557)
Q Consensus 382 gla~~~~~~~~~---~~~~~~g~~~y~aPE~l~~-------~~~s~~~DvwslG~ll~ellt-g~~pf~~~~~~~~~~~~ 450 (557)
|++......... ......||+.|+|||++.+ ..++.++|||||||++|||+| |+.||....... .
T Consensus 173 G~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~~----~ 248 (434)
T 2rio_A 173 GLCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRE----S 248 (434)
T ss_dssp TTCEECCC--------------CCTTSCHHHHSCCCTTSCCCCCCTHHHHHHHHHHHHHHHTTSCCTTCSTTTHH----H
T ss_pred ccceecCCCCccceeeecCCCCCCCccCHHHhccccccccccCcchhhhhHhHHHHHHHHHhCCCCCCCCchhhH----H
Confidence 999876543221 1223468999999999976 578999999999999999999 999997432211 1
Q ss_pred HHHHHHHhcCCccccccccccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 008707 451 HWARSMIKKGDVISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 505 (557)
Q Consensus 451 ~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~evl~ 505 (557)
.. + .+... . +.............+.+++.+||+.||++|||+.||++
T Consensus 249 ~i----~-~~~~~-~--~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~ 295 (434)
T 2rio_A 249 NI----I-RGIFS-L--DEMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLR 295 (434)
T ss_dssp HH----H-HTCCC-C--CCCTTCCCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred HH----h-cCCCC-c--ccccccccccchHHHHHHHHHHhhCChhhCCCHHHHHh
Confidence 11 1 11110 0 01111123455678999999999999999999999986
No 240
>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*
Probab=100.00 E-value=1.5e-37 Score=315.25 Aligned_cols=249 Identities=20% Similarity=0.275 Sum_probs=169.1
Q ss_pred HHh-hcccCCCCceEEEEEEEc-CCcEEEEEEccCccchhHHHHHHHHHHHhhcCCCCccceeeEEEe----cCeeEEEE
Q 008707 237 NNF-CKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCSHRTQQFVTEVALLSRIHHRNLVPLIGYCEE----EHQRILVY 310 (557)
Q Consensus 237 ~~~-~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~----~~~~~lv~ 310 (557)
|.+ .+.||+|+||.||+|.+. +++.||+|++.... ....+....++.++||||+++++++.. ....++||
T Consensus 30 y~i~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~----~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv~ 105 (336)
T 3fhr_A 30 YQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDSP----KARQEVDHHWQASGGPHIVCILDVYENMHHGKRCLLIIM 105 (336)
T ss_dssp EEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESSH----HHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEEE
T ss_pred eEecceeeeeCCCeEEEEEEECCCCCEEEEEEecCcH----HHHHHHHHHHHhcCCCChHHHHHHHhhccCCCceEEEEE
Confidence 444 356999999999999887 68999999986531 112222334566799999999999876 45589999
Q ss_pred EecCCCChhhhhhccCCCCCcCHHHHHHHHHHHHHHHHHHHcCCCCCeEeeccCCCCEEeCC---CCcEEEecccCcccc
Q 008707 311 EYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDI---NMRAKVSDFGLSRQA 387 (557)
Q Consensus 311 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~dlk~~NIll~~---~~~~kl~Dfgla~~~ 387 (557)
||+++|+|.+++... ....+++..++.++.|++.||+|||+ .+++||||||+||+++. ++.+||+|||++...
T Consensus 106 e~~~gg~L~~~l~~~-~~~~l~~~~~~~i~~ql~~~l~~LH~---~~ivH~dlkp~NIll~~~~~~~~~kl~Dfg~~~~~ 181 (336)
T 3fhr_A 106 ECMEGGELFSRIQER-GDQAFTEREAAEIMRDIGTAIQFLHS---HNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKET 181 (336)
T ss_dssp ECCTTEEHHHHHHTC--CCCCBHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEESCSSTTCCEEECCCTTCEEC
T ss_pred eccCCCCHHHHHHhc-CCCCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEEEecCCCceEEEeccccceec
Confidence 999999999999854 23569999999999999999999998 99999999999999976 455999999999865
Q ss_pred CCCCccccccccCCCCccCCcccCCCCCCcccceehhHHHHHHHHhCCCCCCCCCccccccHHHHHHHHHhcCCcccccc
Q 008707 388 EEDLTHISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVD 467 (557)
Q Consensus 388 ~~~~~~~~~~~~g~~~y~aPE~l~~~~~s~~~DvwslG~ll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 467 (557)
.... .....+|+.|+|||.+.+..++.++||||||+++|+|++|+.||......... ......+..+.. ..
T Consensus 182 ~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~---~~~~~~~~~~~~-~~-- 252 (336)
T 3fhr_A 182 TQNA---LQTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAIS---PGMKRRIRLGQY-GF-- 252 (336)
T ss_dssp -------------------------CHHHHHHHHHHHHHHHHHHHHSSCCC-------------------------CC--
T ss_pred cccc---cccCCCCcCccChhhhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCccchhhh---hhHHHhhhcccc-cc--
Confidence 4332 22345799999999999989999999999999999999999999744322110 000111111110 00
Q ss_pred ccccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 008707 468 PVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 505 (557)
Q Consensus 468 ~~l~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~evl~ 505 (557)
........+..+.+++.+||+.||++|||++|+++
T Consensus 253 ---~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 287 (336)
T 3fhr_A 253 ---PNPEWSEVSEDAKQLIRLLLKTDPTERLTITQFMN 287 (336)
T ss_dssp ---CTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred ---CchhhccCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 00001122346889999999999999999999998
No 241
>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*
Probab=100.00 E-value=4.6e-38 Score=340.05 Aligned_cols=268 Identities=23% Similarity=0.323 Sum_probs=203.9
Q ss_pred HHHHhhcccCCCCceEEEEEEEc-CCcEEEEEEccCc-cchhHHHHHHHHHHHhhcCCCCccceeeEEEe------cCee
Q 008707 235 ATNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADS-CSHRTQQFVTEVALLSRIHHRNLVPLIGYCEE------EHQR 306 (557)
Q Consensus 235 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~-~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~------~~~~ 306 (557)
..|++.+.||+|+||.||+|.+. +|+.||+|++... .....+.+.+|+++++.++||||+++++++.. .+..
T Consensus 14 grY~i~~~LG~G~fG~Vyla~~~~tg~~VAVKvi~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~v~~~~~~~~~~~~~ 93 (676)
T 3qa8_A 14 GPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPNDLP 93 (676)
T ss_dssp ---CCCCCCCBCSSSBCCCCCCTTTTCCEEECCCCSCCCHHHHHHHHHHHHHHHHCCBTTBCCEEECCTTTCCCCTTSSC
T ss_pred CCeEEEEEEeeCCCeEEEEEEECCCCcEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCceeeeecccccccCCCeE
Confidence 56788999999999999999875 5899999998754 33445678999999999999999999998755 6678
Q ss_pred EEEEEecCCCChhhhhhccCCCCCcCHHHHHHHHHHHHHHHHHHHcCCCCCeEeeccCCCCEEeCCCCc---EEEecccC
Q 008707 307 ILVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMR---AKVSDFGL 383 (557)
Q Consensus 307 ~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~dlk~~NIll~~~~~---~kl~Dfgl 383 (557)
++||||+++|+|.+++........+++..++.++.|++.||+|||+ .||+||||||+||+++.++. +||+|||+
T Consensus 94 ~LVmEy~~ggsL~~~L~~~~~~~~lse~~i~~I~~QLl~aL~yLHs---~gIVHrDLKP~NILl~~~g~~~~vKL~DFG~ 170 (676)
T 3qa8_A 94 LLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHE---NRIIHRDLKPENIVLQPGPQRLIHKIIDLGY 170 (676)
T ss_dssp CCEEECCSSCBHHHHHHSSSCTTCCCSSHHHHHHHHHHHHHHHHHH---TTBCCCCCCSTTEEEECCSSSCEEEECSCCC
T ss_pred EEEEEeCCCCCHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHH---CCCccCCCCHHHeEeecCCCceeEEEccccc
Confidence 9999999999999999865555578899999999999999999998 99999999999999997665 99999999
Q ss_pred ccccCCCCccccccccCCCCccCCcccCCCCCCcccceehhHHHHHHHHhCCCCCCCCCccccccHHHHHHHHHhcCCcc
Q 008707 384 SRQAEEDLTHISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVI 463 (557)
Q Consensus 384 a~~~~~~~~~~~~~~~g~~~y~aPE~l~~~~~s~~~DvwslG~ll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 463 (557)
+........ .....||+.|+|||.+.+..++.++||||||+++|+|++|..||...... ..|.......+...
T Consensus 171 a~~~~~~~~--~~~~~gt~~Y~APE~l~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~-----~~~~~~i~~~~~~~ 243 (676)
T 3qa8_A 171 AKELDQGEL--CTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPNWQP-----VQWHGKVREKSNEH 243 (676)
T ss_dssp CCBTTSCCC--CCCCCSCCTTCSSCSSCCSCCSTTHHHHHHHHHHHHHHSSCSSCCSSCHH-----HHSSTTCC------
T ss_pred ccccccccc--cccccCCcccCChHHhccCCCCchhHHHHHHHHHHHHHHCCCCCCcccch-----hhhhhhhhcccchh
Confidence 987654332 23345899999999999999999999999999999999999999743211 11111000000000
Q ss_pred cccc----------cc--ccCCCCHHHHHHHHHHHHHccccCCCCCCCHHH-----HHHHHHhhhh
Q 008707 464 SIVD----------PV--LIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQE-----IVLAIQDSIK 512 (557)
Q Consensus 464 ~~~d----------~~--l~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~e-----vl~~L~~~~~ 512 (557)
.... .. .........+..+.+++.+||..||++|||+.| ..+.++++..
T Consensus 244 ~~~~~~l~g~~~~~~~lp~p~~l~~~ls~~L~dLI~~mL~~DP~kRPTa~elL~hp~F~~l~~iL~ 309 (676)
T 3qa8_A 244 IVVYDDLTGAVKFSSVLPTPNHLSGILAGKLERWLQCMLMWHQRQRGTDPQNPNVGCFQALDSILS 309 (676)
T ss_dssp CCSCCCCSSSCCCCSSSCCSCCCCGGGHHHHHHHHHHHSCSSCC---CCTTCCCCTTHHHHHHHHC
T ss_pred hhhhhhhccccccccccCCchhhchhhhHHHHHHHHHHccCCHhhCcCHHHHhcCHHHHHHHHHHh
Confidence 0000 00 011233445678999999999999999999988 4455555554
No 242
>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}
Probab=100.00 E-value=3.3e-37 Score=309.82 Aligned_cols=249 Identities=23% Similarity=0.320 Sum_probs=177.7
Q ss_pred HHhhcccCCCCceEEEEEEEc-CCcEEEEEEccCccc-hh-HHHHHHHHHHHhhcCCCCccceeeEEEecCeeEEEEEec
Q 008707 237 NNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCS-HR-TQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYEYM 313 (557)
Q Consensus 237 ~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~-~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~lv~e~~ 313 (557)
|++.+.||+|+||.||+|.+. +|+.||+|++..... .. .+.+.++..+++.++||||+++++++.+.+..++||||+
T Consensus 27 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~ 106 (318)
T 2dyl_A 27 LENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGTFITNTDVFIAMELM 106 (318)
T ss_dssp EEEEEEC------CEEEEEETTTCCEEEEEEEETTSCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECCC
T ss_pred ccccceeeecCCeeEEEEEEecCCeEEEEEEecccccchHHHHHHHHHHHHHHhcCCCceeeEEEEEecCCcEEEEEecc
Confidence 456789999999999999886 689999999875432 22 234445556788889999999999999999999999999
Q ss_pred CCCChhhhhhccCCCCCcCHHHHHHHHHHHHHHHHHHHcCCCC-CeEeeccCCCCEEeCCCCcEEEecccCccccCCCCc
Q 008707 314 HNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNP-GIIHRDVKSSNILLDINMRAKVSDFGLSRQAEEDLT 392 (557)
Q Consensus 314 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~-~ivH~dlk~~NIll~~~~~~kl~Dfgla~~~~~~~~ 392 (557)
++.+..+... ....+++..+..++.|+++||+|||+ . +++||||||+||+++.++.+||+|||++........
T Consensus 107 -~~~~~~l~~~--~~~~~~~~~~~~~~~~i~~~l~~lH~---~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~ 180 (318)
T 2dyl_A 107 -GTCAEKLKKR--MQGPIPERILGKMTVAIVKALYYLKE---KHGVIHRDVKPSNILLDERGQIKLCDFGISGRLVDDKA 180 (318)
T ss_dssp -SEEHHHHHHH--HTSCCCHHHHHHHHHHHHHHHHHHHH---HHCCCCCCCCGGGEEECTTSCEEECCCTTC--------
T ss_pred -CCcHHHHHHH--hccCCCHHHHHHHHHHHHHHHHHHHh---hCCEEeCCCCHHHEEECCCCCEEEEECCCchhccCCcc
Confidence 5566555543 24568999999999999999999997 5 999999999999999999999999999976544322
Q ss_pred cccccccCCCCccCCcccC-----CCCCCcccceehhHHHHHHHHhCCCCCCCCCccccccHHHHHHHHHhcCCcccccc
Q 008707 393 HISSVARGTVGYLDPEYYG-----NQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVD 467 (557)
Q Consensus 393 ~~~~~~~g~~~y~aPE~l~-----~~~~s~~~DvwslG~ll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 467 (557)
.....|++.|+|||.+. ...++.++||||||+++|+|++|+.||...... .+....... +.......
T Consensus 181 --~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~-----~~~~~~~~~-~~~~~~~~ 252 (318)
T 2dyl_A 181 --KDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKTD-----FEVLTKVLQ-EEPPLLPG 252 (318)
T ss_dssp --------CCTTCCHHHHC--------CCTHHHHHHHHHHHHHHHHSSCTTTTCCSH-----HHHHHHHHH-SCCCCCCS
T ss_pred --ccccCCCccccChhhcccccccccCCccccchhhHHHHHHHHHhCCCCCCCCCcc-----HHHHHHHhc-cCCCCCCc
Confidence 22335899999999984 557888999999999999999999999742211 111222222 11111110
Q ss_pred ccccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 008707 468 PVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLA 506 (557)
Q Consensus 468 ~~l~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~evl~~ 506 (557)
.. ..+..+.+++.+||+.||.+|||++||++.
T Consensus 253 ---~~----~~~~~l~~li~~~l~~dp~~Rps~~~ll~h 284 (318)
T 2dyl_A 253 ---HM----GFSGDFQSFVKDCLTKDHRKRPKYNKLLEH 284 (318)
T ss_dssp ---SS----CCCHHHHHHHHHHTCSCTTTSCCHHHHTTS
T ss_pred ---cC----CCCHHHHHHHHHHccCChhHCcCHHHHhhC
Confidence 01 122368899999999999999999999873
No 243
>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}
Probab=100.00 E-value=3.1e-38 Score=316.72 Aligned_cols=243 Identities=26% Similarity=0.414 Sum_probs=189.2
Q ss_pred HHHHHHHHhhcccCCCCceEEEEEEEc-CCcEEEEEEccCccch------hHHHHHHHHHHHhhc----CCCCccceeeE
Q 008707 231 ELEEATNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCSH------RTQQFVTEVALLSRI----HHRNLVPLIGY 299 (557)
Q Consensus 231 ~~~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~------~~~~~~~E~~il~~l----~h~nIv~~~~~ 299 (557)
+.....|++.+.||+|+||.||+|... +++.||+|++...... ....+.+|+.++.++ +||||++++++
T Consensus 27 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~h~~i~~~~~~ 106 (312)
T 2iwi_A 27 EAFEAEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLLDW 106 (312)
T ss_dssp ------CEEEEEEEEETTEEEEEEECTTTCCEEEEEECCSTTTC--------CCCCHHHHHHHHHHSSCCCSSBCCEEEE
T ss_pred hhhhhceEEeeEEEcCCCEEEEEEEEccCCeEEEEEEEecccccccccchhhHHHHHHHHHHHhhcccCCCCCeeeEEEE
Confidence 344566778899999999999999874 6889999998654221 223456799999998 89999999999
Q ss_pred EEecCeeEEEEEe-cCCCChhhhhhccCCCCCcCHHHHHHHHHHHHHHHHHHHcCCCCCeEeeccCCCCEEeC-CCCcEE
Q 008707 300 CEEEHQRILVYEY-MHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLD-INMRAK 377 (557)
Q Consensus 300 ~~~~~~~~lv~e~-~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~dlk~~NIll~-~~~~~k 377 (557)
+...+..++|||+ +.+++|.+++.. ...+++..++.++.||++||+|||+ .+++||||||+||+++ .++.+|
T Consensus 107 ~~~~~~~~~v~e~~~~~~~L~~~l~~---~~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dlkp~Nil~~~~~~~~k 180 (312)
T 2iwi_A 107 FETQEGFMLVLERPLPAQDLFDYITE---KGPLGEGPSRCFFGQVVAAIQHCHS---RGVVHRDIKDENILIDLRRGCAK 180 (312)
T ss_dssp C-----CEEEEECCSSEEEHHHHHHH---HCSCCHHHHHHHHHHHHHHHHHHHH---HTEECCCCSGGGEEEETTTTEEE
T ss_pred EecCCeEEEEEEecCCCCCHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHH---CCeeecCCChhhEEEeCCCCeEE
Confidence 9999999999999 789999999974 3468999999999999999999998 8999999999999999 889999
Q ss_pred EecccCccccCCCCccccccccCCCCccCCcccCCCCC-CcccceehhHHHHHHHHhCCCCCCCCCccccccHHHHHHHH
Q 008707 378 VSDFGLSRQAEEDLTHISSVARGTVGYLDPEYYGNQQL-TEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSM 456 (557)
Q Consensus 378 l~Dfgla~~~~~~~~~~~~~~~g~~~y~aPE~l~~~~~-s~~~DvwslG~ll~elltg~~pf~~~~~~~~~~~~~~~~~~ 456 (557)
|+|||++....... .....|++.|+|||.+.+..+ +.++||||||+++|+|++|+.||.... +
T Consensus 181 l~dfg~~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~--------~----- 244 (312)
T 2iwi_A 181 LIDFGSGALLHDEP---YTDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFERDQ--------E----- 244 (312)
T ss_dssp ECCCSSCEECCSSC---BCCCCSCTTTSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHH--------H-----
T ss_pred EEEcchhhhcccCc---ccccCCcccccCceeeecCCCCCccchHHHHHHHHHHHHHCCCCCCChH--------H-----
Confidence 99999998765432 223458999999999876665 458999999999999999999997321 0
Q ss_pred HhcCCccccccccccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 008707 457 IKKGDVISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 505 (557)
Q Consensus 457 ~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~evl~ 505 (557)
+..... .+.. .....+.+++.+||+.+|++|||++|+++
T Consensus 245 ~~~~~~------~~~~----~~~~~~~~li~~~l~~~p~~Rps~~e~l~ 283 (312)
T 2iwi_A 245 ILEAEL------HFPA----HVSPDCCALIRRCLAPKPSSRPSLEEILL 283 (312)
T ss_dssp HHHTCC------CCCT----TSCHHHHHHHHHHTCSSTTTSCCHHHHHH
T ss_pred Hhhhcc------CCcc----cCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 001110 0111 12346889999999999999999999986
No 244
>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...
Probab=100.00 E-value=9.3e-38 Score=314.54 Aligned_cols=239 Identities=24% Similarity=0.374 Sum_probs=194.4
Q ss_pred HHHHhhcccCCCCceEEEEEEEc-CCcEEEEEEccCccch------hHHHHHHHHHHHhhcC--CCCccceeeEEEecCe
Q 008707 235 ATNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCSH------RTQQFVTEVALLSRIH--HRNLVPLIGYCEEEHQ 305 (557)
Q Consensus 235 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~------~~~~~~~E~~il~~l~--h~nIv~~~~~~~~~~~ 305 (557)
..|++.+.||+|+||.||+|... +++.||+|++...... ..+.+.+|+.+++.++ |+||+++++++...+.
T Consensus 43 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~i~~~~~~~~~~~~ 122 (320)
T 3a99_A 43 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDS 122 (320)
T ss_dssp TTEEEEEECSSSSSCEEEEEEETTTTEEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEECSSE
T ss_pred CceEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhccCCCCceEEEEEEecCCc
Confidence 34566899999999999999864 6889999998653211 2245678999999996 5999999999999999
Q ss_pred eEEEEEecCC-CChhhhhhccCCCCCcCHHHHHHHHHHHHHHHHHHHcCCCCCeEeeccCCCCEEeC-CCCcEEEecccC
Q 008707 306 RILVYEYMHN-GTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLD-INMRAKVSDFGL 383 (557)
Q Consensus 306 ~~lv~e~~~~-gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~dlk~~NIll~-~~~~~kl~Dfgl 383 (557)
.++|||++.+ ++|.+++.. ...+++..++.++.||++||+|||+ .+|+||||||+||+++ +++.+||+|||+
T Consensus 123 ~~lv~e~~~~~~~L~~~l~~---~~~l~~~~~~~i~~qi~~~L~~LH~---~~ivH~Dlkp~NIll~~~~~~~kL~Dfg~ 196 (320)
T 3a99_A 123 FVLILERPEPVQDLFDFITE---RGALQEELARSFFWQVLEAVRHCHN---CGVLHRDIKDENILIDLNRGELKLIDFGS 196 (320)
T ss_dssp EEEEEECCSSEEEHHHHHHH---HCSCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEEETTTTEEEECCCTT
T ss_pred EEEEEEcCCCCccHHHHHhc---cCCCCHHHHHHHHHHHHHHHHHHHH---CCcEeCCCCHHHEEEeCCCCCEEEeeCcc
Confidence 9999999976 899999874 3568999999999999999999998 9999999999999999 789999999999
Q ss_pred ccccCCCCccccccccCCCCccCCcccCCCCC-CcccceehhHHHHHHHHhCCCCCCCCCccccccHHHHHHHHHhcCCc
Q 008707 384 SRQAEEDLTHISSVARGTVGYLDPEYYGNQQL-TEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDV 462 (557)
Q Consensus 384 a~~~~~~~~~~~~~~~g~~~y~aPE~l~~~~~-s~~~DvwslG~ll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 462 (557)
+....... .....||+.|+|||.+.+..+ +.++||||||+++|||++|+.||.... . +..+..
T Consensus 197 ~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~------------~-~~~~~~ 260 (320)
T 3a99_A 197 GALLKDTV---YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE------------E-IIRGQV 260 (320)
T ss_dssp CEECCSSC---BCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHH------------H-HHHCCC
T ss_pred cccccccc---ccCCCCCccCCChHHhccCCCCCccchHHhHHHHHHHHHHCCCCCCChh------------h-hhcccc
Confidence 98765432 223458999999999876655 688999999999999999999997321 0 111111
Q ss_pred cccccccccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 008707 463 ISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 505 (557)
Q Consensus 463 ~~~~d~~l~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~evl~ 505 (557)
. .... .+..+.+++.+||+.||++|||++||++
T Consensus 261 ~------~~~~----~~~~~~~li~~~l~~dp~~Rps~~~ll~ 293 (320)
T 3a99_A 261 F------FRQR----VSSECQHLIRWCLALRPSDRPTFEEIQN 293 (320)
T ss_dssp C------CSSC----CCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred c------cccc----CCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 0 1111 2236889999999999999999999986
No 245
>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}
Probab=100.00 E-value=3.4e-37 Score=322.64 Aligned_cols=246 Identities=24% Similarity=0.338 Sum_probs=183.1
Q ss_pred HHhhcccCCCCceEEEEEEEcCCcEEEEEEccCccchhHHHHHHHHHHHhhc-CCCCccceeeEEEecCeeEEEEEecCC
Q 008707 237 NNFCKKIGKGSFGSVYYGKMKDGKEVAVKIMADSCSHRTQQFVTEVALLSRI-HHRNLVPLIGYCEEEHQRILVYEYMHN 315 (557)
Q Consensus 237 ~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~il~~l-~h~nIv~~~~~~~~~~~~~lv~e~~~~ 315 (557)
+++.+.||+|+||+||.....+++.||||++..... ..+.+|+++++.+ +||||+++++++.+....++||||+.
T Consensus 26 y~~~~~LG~G~~G~V~~~~~~~~~~vAvK~~~~~~~---~~~~~E~~~l~~l~~HpnIv~l~~~~~~~~~~~lv~E~~~- 101 (432)
T 3p23_A 26 FCPKDVLGHGAEGTIVYRGMFDNRDVAVKRILPECF---SFADREVQLLRESDEHPNVIRYFCTEKDRQFQYIAIELCA- 101 (432)
T ss_dssp EEEEEEEEECGGGCEEEEEESSSSEEEEEEECTTTE---EECHHHHHHHHHSCCCTTBCCEEEEEEETTEEEEEEECCS-
T ss_pred EecCCeeecCcCEEEEEEEEeCCeEEEEEEECHHHH---HHHHHHHHHHHhccCCCCcCeEEEEEecCCEEEEEEECCC-
Confidence 344688999999997666566799999999865332 2355799999999 79999999999999999999999995
Q ss_pred CChhhhhhccCCCCCcCHHHHHHHHHHHHHHHHHHHcCCCCCeEeeccCCCCEEeCC-----CCcEEEecccCccccCCC
Q 008707 316 GTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDI-----NMRAKVSDFGLSRQAEED 390 (557)
Q Consensus 316 gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~dlk~~NIll~~-----~~~~kl~Dfgla~~~~~~ 390 (557)
|+|.+++... ........++.++.||+.||+|||+ .+|+||||||+|||++. ...+||+|||++......
T Consensus 102 g~L~~~l~~~--~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivHrDlKp~NIll~~~~~~~~~~~kL~DFG~a~~~~~~ 176 (432)
T 3p23_A 102 ATLQEYVEQK--DFAHLGLEPITLLQQTTSGLAHLHS---LNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVG 176 (432)
T ss_dssp EEHHHHHHSS--SCCCCSSCHHHHHHHHHHHHHHHHH---TTCCCCCCSTTSEEECCCBTTTBCCEEECCTTEEECC---
T ss_pred CCHHHHHHhc--CCCccchhHHHHHHHHHHHHHHHHH---CcCEeCCCCHHHEEEecCCCCCceeEEEecccceeeccCC
Confidence 6999999753 2334445667899999999999999 99999999999999953 235889999999876533
Q ss_pred Cc--cccccccCCCCccCCcccC---CCCCCcccceehhHHHHHHHHh-CCCCCCCCCccccccHHHHHHHHHhcCCccc
Q 008707 391 LT--HISSVARGTVGYLDPEYYG---NQQLTEKSDVYSFGVVLLELIS-GKKPVSVEDFGAELNIVHWARSMIKKGDVIS 464 (557)
Q Consensus 391 ~~--~~~~~~~g~~~y~aPE~l~---~~~~s~~~DvwslG~ll~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 464 (557)
.. .......||+.|+|||++. ...++.++|||||||++|||+| |..||....... ........ ...
T Consensus 177 ~~~~~~~~~~~gt~~y~APE~l~~~~~~~~t~~~DiwSlG~il~ellt~g~~pf~~~~~~~-------~~~~~~~~-~~~ 248 (432)
T 3p23_A 177 RHSFSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQRQ-------ANILLGAC-SLD 248 (432)
T ss_dssp ---------CCSCTTSCCGGGTSCC---CCCTHHHHHHHHHHHHHHHTTSCBTTBSTTTHH-------HHHHTTCC-CCT
T ss_pred CcceeeccccCCCcCccChhhhhcccccCCCcHHHHHHHHHHHHHHHcCCCCCcchhhHHH-------HHHHhccC-Ccc
Confidence 21 1223456999999999997 4567889999999999999999 999996322110 11111111 111
Q ss_pred cccccccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 008707 465 IVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 505 (557)
Q Consensus 465 ~~d~~l~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~evl~ 505 (557)
... ........+.+++.+||+.||++|||++||++
T Consensus 249 ~~~------~~~~~~~~~~~li~~~L~~dP~~Rps~~evl~ 283 (432)
T 3p23_A 249 CLH------PEKHEDVIARELIEKMIAMDPQKRPSAKHVLK 283 (432)
T ss_dssp TSC------TTCHHHHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred ccC------ccccccHHHHHHHHHHHhCCHhhCCCHHHHHh
Confidence 111 11233446789999999999999999999984
No 246
>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A
Probab=100.00 E-value=4.6e-36 Score=297.03 Aligned_cols=234 Identities=14% Similarity=0.189 Sum_probs=182.4
Q ss_pred HHHHhhcccCCCCceEEEEEEEc-CCcEEEEEEccCccc---hhHHHHHHHHHHHhhcCCCCccceeeEEEecCeeEEEE
Q 008707 235 ATNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCS---HRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVY 310 (557)
Q Consensus 235 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~lv~ 310 (557)
..|++.+.||+|+||.||+|.+. +++.||+|++..... ...+.+.+|+.++..++||||+++++++.+++..++||
T Consensus 31 ~~y~i~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 110 (286)
T 3uqc_A 31 GRYRLLIFHGGVPPLQFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPGVARVLDVVHTRAGGLVVA 110 (286)
T ss_dssp TTEEEEEEEEBSTTCEEEEEEETTTTEEEEEEESCTTCCSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred CcEEEEEEEcccCCeEEEEEEecCCCceEEEEEECcccccCHHHHHHHHHHHHHHhcCCCCCcceeeEEEEECCcEEEEE
Confidence 44667799999999999999886 489999999975432 33467899999999999999999999999999999999
Q ss_pred EecCCCChhhhhhccCCCCCcCHHHHHHHHHHHHHHHHHHHcCCCCCeEeeccCCCCEEeCCCCcEEEecccCccccCCC
Q 008707 311 EYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEED 390 (557)
Q Consensus 311 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfgla~~~~~~ 390 (557)
||++|++|.+++.. . .....+..++.|++.||+|||+ +||+||||||+|||++.++.+||++++
T Consensus 111 e~~~g~~L~~~l~~----~-~~~~~~~~i~~ql~~aL~~lH~---~givH~Dikp~NIll~~~g~~kl~~~~-------- 174 (286)
T 3uqc_A 111 EWIRGGSLQEVADT----S-PSPVGAIRAMQSLAAAADAAHR---AGVALSIDHPSRVRVSIDGDVVLAYPA-------- 174 (286)
T ss_dssp ECCCEEEHHHHHTT----C-CCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCSGGGEEEETTSCEEECSCC--------
T ss_pred EecCCCCHHHHHhc----C-CChHHHHHHHHHHHHHHHHHHH---CCCccCCCCcccEEEcCCCCEEEEecc--------
Confidence 99999999999853 2 3556788899999999999998 999999999999999999999998543
Q ss_pred CccccccccCCCCccCCcccCCCCCCcccceehhHHHHHHHHhCCCCCCCCCccccccHHHHHHHHHhcCCccccccccc
Q 008707 391 LTHISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPVL 470 (557)
Q Consensus 391 ~~~~~~~~~g~~~y~aPE~l~~~~~s~~~DvwslG~ll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l 470 (557)
|++ .++.++||||||+++|||+||+.||...+......... ... .+.. ..+
T Consensus 175 -------------~~~-------~~~~~~Di~slG~il~elltg~~Pf~~~~~~~~~~~~~---~~~-~~~~---~~~-- 225 (286)
T 3uqc_A 175 -------------TMP-------DANPQDDIRGIGASLYALLVNRWPLPEAGVRSGLAPAE---RDT-AGQP---IEP-- 225 (286)
T ss_dssp -------------CCT-------TCCHHHHHHHHHHHHHHHHHSEECSCCCSBCCCSEECC---BCT-TSCB---CCH--
T ss_pred -------------ccC-------CCCchhHHHHHHHHHHHHHHCCCCCCcCCcchhhHHHH---HHh-ccCC---CCh--
Confidence 333 25889999999999999999999998554322110000 000 0000 000
Q ss_pred cCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhhhhhc
Q 008707 471 IGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKIEK 515 (557)
Q Consensus 471 ~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~evl~~L~~~~~~~~ 515 (557)
.......+..+.+++.+||+.||++| |+.|+++.|+++.....
T Consensus 226 -~~~~~~~~~~l~~li~~~l~~dP~~R-s~~el~~~L~~~~~~~~ 268 (286)
T 3uqc_A 226 -ADIDRDIPFQISAVAARSVQGDGGIR-SASTLLNLMQQATAVAD 268 (286)
T ss_dssp -HHHCTTSCHHHHHHHHHHHCTTSSCC-CHHHHHHHHHHHHC---
T ss_pred -hhcccCCCHHHHHHHHHHcccCCccC-CHHHHHHHHHHHhccCC
Confidence 00011223468899999999999999 99999999999886543
No 247
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=100.00 E-value=1.8e-36 Score=335.52 Aligned_cols=240 Identities=18% Similarity=0.286 Sum_probs=193.1
Q ss_pred HHHHhhcccCCCCceEEEEEEEc--CCcEEEEEEccCcc-chhHHHHHHHHHHHhhcCCCCccceeeEEEecCe-----e
Q 008707 235 ATNNFCKKIGKGSFGSVYYGKMK--DGKEVAVKIMADSC-SHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQ-----R 306 (557)
Q Consensus 235 ~~~~~~~~lG~G~~g~Vy~~~~~--~~~~vavK~~~~~~-~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~-----~ 306 (557)
..|++.+.||+|+||.||+|.+. +|+.||||++.... ....+.+.+|++++++++||||+++++++...+. .
T Consensus 80 ~~y~i~~~lg~G~~g~Vy~a~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~~~ 159 (681)
T 2pzi_A 80 GQYEVKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSGDAEAQAMAMAERQFLAEVVHPSIVQIFNFVEHTDRHGDPVG 159 (681)
T ss_dssp TTEEEEEEEEEETTEEEEEEEEGGGTTEEEEEEESCSSCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEEECTTSCEEE
T ss_pred CceEEEEEEeeCCCeEEEEEEEcCCCCcEEEEEEeCccCCHHHHHHHHHHHHHHHhcCCCCcCeEeeeEeecCCCCCcee
Confidence 45667899999999999999876 58999999986543 3445678899999999999999999999987665 6
Q ss_pred EEEEEecCCCChhhhhhccCCCCCcCHHHHHHHHHHHHHHHHHHHcCCCCCeEeeccCCCCEEeCCCCcEEEecccCccc
Q 008707 307 ILVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQ 386 (557)
Q Consensus 307 ~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfgla~~ 386 (557)
++||||+++++|.+++. ..+++..++.++.||+.||+|||+ +||+||||||+|||++.+ .+||+|||++..
T Consensus 160 ~lv~E~~~g~~L~~~~~-----~~l~~~~~~~~~~qi~~aL~~lH~---~giiHrDlkp~NIll~~~-~~kl~DFG~a~~ 230 (681)
T 2pzi_A 160 YIVMEYVGGQSLKRSKG-----QKLPVAEAIAYLLEILPALSYLHS---IGLVYNDLKPENIMLTEE-QLKLIDLGAVSR 230 (681)
T ss_dssp EEEEECCCCEECC---------CCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECSS-CEEECCCTTCEE
T ss_pred EEEEEeCCCCcHHHHHh-----CCCCHHHHHHHHHHHHHHHHHHHH---CCCeecccChHHeEEeCC-cEEEEecccchh
Confidence 99999999999988765 268999999999999999999998 999999999999999975 899999999987
Q ss_pred cCCCCccccccccCCCCccCCcccCCCCCCcccceehhHHHHHHHHhCCCCCCCCCccccccHHHHHHHHHhcCCccccc
Q 008707 387 AEEDLTHISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIV 466 (557)
Q Consensus 387 ~~~~~~~~~~~~~g~~~y~aPE~l~~~~~s~~~DvwslG~ll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 466 (557)
.... ....||+.|+|||++.+.. +.++||||||+++|+|++|..||.........
T Consensus 231 ~~~~-----~~~~gt~~y~aPE~~~~~~-~~~sDi~slG~~l~~l~~g~~~~~~~~~~~~~------------------- 285 (681)
T 2pzi_A 231 INSF-----GYLYGTPGFQAPEIVRTGP-TVATDIYTVGRTLAALTLDLPTRNGRYVDGLP------------------- 285 (681)
T ss_dssp TTCC-----SCCCCCTTTSCTTHHHHCS-CHHHHHHHHHHHHHHHHSCCCEETTEECSSCC-------------------
T ss_pred cccC-----CccCCCccccCHHHHcCCC-CCceehhhhHHHHHHHHhCCCCCccccccccc-------------------
Confidence 6543 2345899999999987654 88999999999999999999888632211000
Q ss_pred cccccCCCCHHHHHHHHHHHHHccccCCCCCC-CHHHHHHHHHhhhh
Q 008707 467 DPVLIGNVKIESIWRIAEVAIQCVEQRGFSRP-KMQEIVLAIQDSIK 512 (557)
Q Consensus 467 d~~l~~~~~~~~~~~l~~li~~cl~~~P~~RP-t~~evl~~L~~~~~ 512 (557)
...........+.+++.+||+.||++|| +++++.+.|.....
T Consensus 286 ----~~~~~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~~~~ 328 (681)
T 2pzi_A 286 ----EDDPVLKTYDSYGRLLRRAIDPDPRQRFTTAEEMSAQLTGVLR 328 (681)
T ss_dssp ----TTCHHHHHCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHHHH
T ss_pred ----ccccccccCHHHHHHHhhhccCChhhCCCHHHHHHHHHHHHHH
Confidence 0000112234688999999999999999 57777777776543
No 248
>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A
Probab=100.00 E-value=2.4e-36 Score=306.27 Aligned_cols=243 Identities=18% Similarity=0.232 Sum_probs=183.7
Q ss_pred HHHHHHHhhcccCCCCceEEEEEEEcCCcEEEEEEccCcc--------chhHHHHHHHHHHHhhcC---------CCCcc
Q 008707 232 LEEATNNFCKKIGKGSFGSVYYGKMKDGKEVAVKIMADSC--------SHRTQQFVTEVALLSRIH---------HRNLV 294 (557)
Q Consensus 232 ~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~--------~~~~~~~~~E~~il~~l~---------h~nIv 294 (557)
+....|++.+.||+|+||.||+|.+ +|+.||||++.... ....+.+.+|+++++.++ ||||+
T Consensus 17 ~~~~~y~~~~~lG~G~~g~V~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~~h~niv 95 (336)
T 2vuw_A 17 LPTEKLQRCEKIGEGVFGEVFQTIA-DHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCNRTEGFI 95 (336)
T ss_dssp SCHHHHHTCEEEEEETTEEEEEEEE-TTEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGGCSSSBCCCBC
T ss_pred cccccchheeeecccCceEEEEEEe-CCceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhccccccCCchh
Confidence 3356788899999999999999988 58999999986542 223367889999999886 65655
Q ss_pred ceeeE-----------------EEe-------------cCeeEEEEEecCCCChhhhhhccCCCCCcCHHHHHHHHHHHH
Q 008707 295 PLIGY-----------------CEE-------------EHQRILVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAA 344 (557)
Q Consensus 295 ~~~~~-----------------~~~-------------~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia 344 (557)
++.+. +.+ .+..++||||+++|++.+.+. ...+++..+..++.||+
T Consensus 96 ~l~~~~~~~~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~~g~ll~~~~----~~~~~~~~~~~i~~qi~ 171 (336)
T 2vuw_A 96 GLNSVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGGIDLEQMR----TKLSSLATAKSILHQLT 171 (336)
T ss_dssp CEEEEEEEESSCCHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEECCCEETGGGT----TTCCCHHHHHHHHHHHH
T ss_pred hhcceeEecCCCcHHHHHHHHHHhhhccccccCccccccCeEEEEEEecCCCccHHHHH----hcCCCHHHHHHHHHHHH
Confidence 55554 333 678999999999997766664 25589999999999999
Q ss_pred HHHHHHH-cCCCCCeEeeccCCCCEEeCCCC--------------------cEEEecccCccccCCCCccccccccCCCC
Q 008707 345 KGLEYLH-TGCNPGIIHRDVKSSNILLDINM--------------------RAKVSDFGLSRQAEEDLTHISSVARGTVG 403 (557)
Q Consensus 345 ~aL~~LH-~~~~~~ivH~dlk~~NIll~~~~--------------------~~kl~Dfgla~~~~~~~~~~~~~~~g~~~ 403 (557)
.||+||| + .+|+||||||+|||++.++ .+||+|||+|+..... ...||+.
T Consensus 172 ~aL~~lH~~---~~ivHrDlKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~vkL~DFG~a~~~~~~------~~~gt~~ 242 (336)
T 2vuw_A 172 ASLAVAEAS---LRFEHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLERDG------IVVFCDV 242 (336)
T ss_dssp HHHHHHHHH---HCCBCSCCCGGGEEEEECSCSEEEEEETTEEEEEECTTEEEEECCCTTCBEEETT------EEECCCC
T ss_pred HHHHHHHHh---CCEeECCCCHHHEEEeccCCcceeeeccCccccccCCCceEEEeeccccEecCCC------cEEEeec
Confidence 9999999 8 9999999999999999887 8999999999876532 2358999
Q ss_pred ccCCcccCCCCCCcccceehhHHH-HHHHHhCCCCCCCCCccccccHHHHHHHHHh-cCCccccccccccCCCCHHHHHH
Q 008707 404 YLDPEYYGNQQLTEKSDVYSFGVV-LLELISGKKPVSVEDFGAELNIVHWARSMIK-KGDVISIVDPVLIGNVKIESIWR 481 (557)
Q Consensus 404 y~aPE~l~~~~~s~~~DvwslG~l-l~elltg~~pf~~~~~~~~~~~~~~~~~~~~-~~~~~~~~d~~l~~~~~~~~~~~ 481 (557)
|+|||++.+.. +.++||||++++ .+++++|..||... .........+. ..... ..............
T Consensus 243 y~aPE~~~g~~-~~~~Diwsl~~~~~~~~~~g~~p~~~~------~~~~~~~~~~~~~~~~~----~~~~~~~~~~~s~~ 311 (336)
T 2vuw_A 243 SMDEDLFTGDG-DYQFDIYRLMKKENNNRWGEYHPYSNV------LWLHYLTDKMLKQMTFK----TKCNTPAMKQIKRK 311 (336)
T ss_dssp TTCSGGGCCCS-SHHHHHHHHHHHHHTTCTTSCCTHHHH------HHHHHHHHHHHHTCCCS----SCCCSHHHHHHHHH
T ss_pred ccChhhhcCCC-ccceehhhhhCCCCcccccccCCCcch------hhhhHHHHhhhhhhccC----cccchhhhhhcCHH
Confidence 99999998766 889999998777 77888999998521 00011111111 11110 00011112345678
Q ss_pred HHHHHHHccccCCCCCCCHHHHH
Q 008707 482 IAEVAIQCVEQRGFSRPKMQEIV 504 (557)
Q Consensus 482 l~~li~~cl~~~P~~RPt~~evl 504 (557)
+.+++.+||+.| |++|++
T Consensus 312 ~~dli~~~L~~d-----sa~e~l 329 (336)
T 2vuw_A 312 IQEFHRTMLNFS-----SATDLL 329 (336)
T ss_dssp HHHHHHHGGGSS-----SHHHHH
T ss_pred HHHHHHHHhccC-----CHHHHH
Confidence 999999999976 899987
No 249
>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*
Probab=100.00 E-value=5e-35 Score=291.61 Aligned_cols=221 Identities=22% Similarity=0.301 Sum_probs=173.6
Q ss_pred cccCCCCceEEEEEEEc-CCcEEEEEEccCccchhHHHHHHHHHHH-hhcCCCCccceeeEEEe----cCeeEEEEEecC
Q 008707 241 KKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCSHRTQQFVTEVALL-SRIHHRNLVPLIGYCEE----EHQRILVYEYMH 314 (557)
Q Consensus 241 ~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~il-~~l~h~nIv~~~~~~~~----~~~~~lv~e~~~ 314 (557)
+.||+|+||.||+|... +++.||+|++... ..+.+|++++ +.++||||+++++++.. ....++||||++
T Consensus 24 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-----~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv~e~~~ 98 (299)
T 3m2w_A 24 QVLGLGINGKVLQIFNKRTQEKFALKMLQDC-----PKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLD 98 (299)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEECS-----HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEEECCCC
T ss_pred cccccCCCeEEEEEEEcCCCcEEEEEEeccc-----HHHHHHHHHHHHhccCCCchhHHhhhhhhcCCCceEEEEEeecC
Confidence 77999999999999874 6899999998642 4566888888 55589999999999877 677899999999
Q ss_pred CCChhhhhhccCCCCCcCHHHHHHHHHHHHHHHHHHHcCCCCCeEeeccCCCCEEeCC---CCcEEEecccCccccCCCC
Q 008707 315 NGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDI---NMRAKVSDFGLSRQAEEDL 391 (557)
Q Consensus 315 ~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~dlk~~NIll~~---~~~~kl~Dfgla~~~~~~~ 391 (557)
+|+|.+++... ....+++..++.++.|++.||+|||+ .+++||||||+||+++. ++.+||+|||++.....
T Consensus 99 ~~~L~~~l~~~-~~~~~~~~~~~~i~~qi~~~l~~lH~---~~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~-- 172 (299)
T 3m2w_A 99 GGELFSRIQDR-GDQAFTEREASEIMKSIGEAIQYLHS---INIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTG-- 172 (299)
T ss_dssp SCBHHHHHHHC-TTCCCBHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEESSSSTTCCEEECCCTTCEECTT--
T ss_pred CCcHHHHHHhc-cCCCCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCCHHHEEEecCCCCCcEEEecccccccccc--
Confidence 99999999864 34568999999999999999999998 99999999999999998 78899999999865432
Q ss_pred ccccccccCCCCccCCcccCCCCCCcccceehhHHHHHHHHhCCCCCCCCCccccccHHHHHHHHHhcCCcccccccccc
Q 008707 392 THISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPVLI 471 (557)
Q Consensus 392 ~~~~~~~~g~~~y~aPE~l~~~~~s~~~DvwslG~ll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~ 471 (557)
..++.++||||||+++|+|++|+.||........ ........... .
T Consensus 173 ---------------------~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~-----------~~~~~~~~~~~--~ 218 (299)
T 3m2w_A 173 ---------------------EKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAI-----------SPGMKTRIRMG--Q 218 (299)
T ss_dssp ---------------------CGGGGHHHHHHHHHHHHHHHHSSCSCCC------------------CCSCCSSCTT--C
T ss_pred ---------------------ccCCchhhHHHHHHHHHHHHHCCCCCCCCcchhh-----------hHHHHHHHhhc--c
Confidence 3457899999999999999999999974322110 00000000000 0
Q ss_pred CCCC----HHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 008707 472 GNVK----IESIWRIAEVAIQCVEQRGFSRPKMQEIVLA 506 (557)
Q Consensus 472 ~~~~----~~~~~~l~~li~~cl~~~P~~RPt~~evl~~ 506 (557)
...+ ...+..+.+++.+||+.||++|||+.|+++.
T Consensus 219 ~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rps~~e~l~h 257 (299)
T 3m2w_A 219 YEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNH 257 (299)
T ss_dssp CSSCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred ccCCchhcccCCHHHHHHHHHHcccChhhCCCHHHHhcC
Confidence 0011 1123478899999999999999999999873
No 250
>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}
Probab=100.00 E-value=2.2e-35 Score=307.54 Aligned_cols=237 Identities=16% Similarity=0.126 Sum_probs=177.0
Q ss_pred hhcccCCCCceEEEEEEEc-CCcEEEEEEccCccc---hhHHHHHHHHHHHhhcCC-CCcccee----------------
Q 008707 239 FCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCS---HRTQQFVTEVALLSRIHH-RNLVPLI---------------- 297 (557)
Q Consensus 239 ~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~il~~l~h-~nIv~~~---------------- 297 (557)
..+.||+|+||.||+|.+. +|+.||||++..... ...+.+.+|+.+++.++| +|.....
T Consensus 82 ~~~~LG~G~fG~Vy~a~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (413)
T 3dzo_A 82 RGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDLVKDPQ 161 (413)
T ss_dssp EEEEEEEETTEEEEEEEETTTCCEEEEEEECCSCC----CCHHHHHHHHGGGGSTTCCSHHHHHHHTCBCCCCEEEECCC
T ss_pred EecccccCCCEEEEEEEecCCCCceEEEEEecCCCccHHHHHHHHHHHHHHHhhccCCCHHHHHHhcccccchhhcccCC
Confidence 4578999999999999865 689999999874322 235678999999999977 3221111
Q ss_pred -----eEEEe-----cCeeEEEEEecCCCChhhhhhcc----CCCCCcCHHHHHHHHHHHHHHHHHHHcCCCCCeEeecc
Q 008707 298 -----GYCEE-----EHQRILVYEYMHNGTLRDRLHGS----VNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDV 363 (557)
Q Consensus 298 -----~~~~~-----~~~~~lv~e~~~~gsL~~~l~~~----~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~dl 363 (557)
.++.. ....+++|+.+ +++|.+++... .....+++..++.++.||++||+|||+ ++|+||||
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~---~~iiHrDi 237 (413)
T 3dzo_A 162 KKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHH---YGLVHTYL 237 (413)
T ss_dssp ---------------CCSEEEEEECC-SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHH---TTEECSCC
T ss_pred CCccccccCCCccccccceEEEeehh-cCCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHHHHHHHh---CCcccCCc
Confidence 11111 12346667765 78999888421 124567888999999999999999998 99999999
Q ss_pred CCCCEEeCCCCcEEEecccCccccCCCCccccccccCCCCccCCccc----------CCCCCCcccceehhHHHHHHHHh
Q 008707 364 KSSNILLDINMRAKVSDFGLSRQAEEDLTHISSVARGTVGYLDPEYY----------GNQQLTEKSDVYSFGVVLLELIS 433 (557)
Q Consensus 364 k~~NIll~~~~~~kl~Dfgla~~~~~~~~~~~~~~~g~~~y~aPE~l----------~~~~~s~~~DvwslG~ll~ellt 433 (557)
||+|||++.++.+||+|||+++..... .....| +.|+|||++ .+..++.++|||||||++|||+|
T Consensus 238 Kp~NILl~~~~~~kL~DFG~a~~~~~~----~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~DvwSlGvil~ellt 312 (413)
T 3dzo_A 238 RPVDIVLDQRGGVFLTGFEHLVRDGAS----AVSPIG-RGFAPPETTAERMLPFGQHHPTLMTFAFDTWTLGLAIYWIWC 312 (413)
T ss_dssp CGGGEEECTTCCEEECCGGGCEETTEE----ECCCCC-TTTCCHHHHHHHTSTTGGGCCEEECHHHHHHHHHHHHHHHHH
T ss_pred ccceEEEecCCeEEEEeccceeecCCc----cccCCC-CceeCchhhhccccccccccCcCCCchhhHHHHHHHHHHHHH
Confidence 999999999999999999998875543 233457 999999999 66678899999999999999999
Q ss_pred CCCCCCCCCccccccHHHHHHHHHhcCCccccccccccCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 008707 434 GKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 505 (557)
Q Consensus 434 g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~evl~ 505 (557)
|+.||.......... ..+.. .... +..+.+++.+||+.||++||++.|+++
T Consensus 313 g~~Pf~~~~~~~~~~---------------~~~~~--~~~~----~~~~~~li~~~l~~dP~~Rpt~~~~l~ 363 (413)
T 3dzo_A 313 ADLPNTDDAALGGSE---------------WIFRS--CKNI----PQPVRALLEGFLRYPKEDRLLPLQAME 363 (413)
T ss_dssp SSCCCCTTGGGSCSG---------------GGGSS--CCCC----CHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred CCCCCCCcchhhhHH---------------HHHhh--cccC----CHHHHHHHHHHccCChhhCcCHHHHHh
Confidence 999997443221110 00100 0112 246889999999999999999877754
No 251
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=99.96 E-value=6.1e-30 Score=275.92 Aligned_cols=186 Identities=17% Similarity=0.144 Sum_probs=130.1
Q ss_pred cccCCCCceEEEEEE-EcCCcEEEEEEccCcc----------chhHHHHHHHHHHHhhc-CCCCccceeeEEEecCeeEE
Q 008707 241 KKIGKGSFGSVYYGK-MKDGKEVAVKIMADSC----------SHRTQQFVTEVALLSRI-HHRNLVPLIGYCEEEHQRIL 308 (557)
Q Consensus 241 ~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~----------~~~~~~~~~E~~il~~l-~h~nIv~~~~~~~~~~~~~l 308 (557)
...+.|++|.+..++ .-.|+.+++|++.... ....++|.+|+++|+++ .|+||+++++++++++..||
T Consensus 240 ~~~~~~~~~~h~~~rr~~fg~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~ed~~~~yL 319 (569)
T 4azs_A 240 NQPYAGAGLAHKRSRRYFFGEDYVCKFFYYDMPHGILTAEESQRNKYELHNEIKFLTQPPAGFDAPAVLAHGENAQSGWL 319 (569)
T ss_dssp CC-C--------CCEEEEECSSEEEEEEESSCSTTCSCHHHHHHHHHHHHHHHHHHHSCCTTCCCCCEEEEEECSSEEEE
T ss_pred hccccCCcccccccccccccceeEEEEEecccccccchhhhhHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEECCEEEE
Confidence 456777777776653 3358899999986431 12335699999999999 69999999999999999999
Q ss_pred EEEecCCCChhhhhhccCCCCCcCHHHHHHHHHHHHHHHHHHHcCCCCCeEeeccCCCCEEeCCCCcEEEecccCccccC
Q 008707 309 VYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAE 388 (557)
Q Consensus 309 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfgla~~~~ 388 (557)
||||++|++|.++|.. ...++.. +|+.||+.||+|+|+ +||+||||||+|||++.++.+||+|||+|+...
T Consensus 320 VMEyv~G~~L~d~i~~---~~~l~~~---~I~~QIl~AL~ylH~---~GIIHRDIKPeNILL~~dg~vKL~DFGlAr~~~ 390 (569)
T 4azs_A 320 VMEKLPGRLLSDMLAA---GEEIDRE---KILGSLLRSLAALEK---QGFWHDDVRPWNVMVDARQHARLIDFGSIVTTP 390 (569)
T ss_dssp EEECCCSEEHHHHHHT---TCCCCHH---HHHHHHHHHHHHHHH---TTCEESCCCGGGEEECTTSCEEECCCTTEESCC
T ss_pred EEecCCCCcHHHHHHh---CCCCCHH---HHHHHHHHHHHHHHH---CCceeccCchHhEEECCCCCEEEeecccCeeCC
Confidence 9999999999999984 4556553 589999999999999 999999999999999999999999999998765
Q ss_pred CCCccccccccCCCCccCCcccCCCCCCcccceehhHHHHHHHHhCCCC
Q 008707 389 EDLTHISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKP 437 (557)
Q Consensus 389 ~~~~~~~~~~~g~~~y~aPE~l~~~~~s~~~DvwslG~ll~elltg~~p 437 (557)
..... .....||+.|+|||++.+ .+..++|+||+|++++++.++..+
T Consensus 391 ~~~~~-~~t~vGTp~YmAPE~l~g-~~~~~~d~~s~g~~~~~l~~~~~~ 437 (569)
T 4azs_A 391 QDCSW-PTNLVQSFFVFVNELFAE-NKSWNGFWRSAPVHPFNLPQPWSN 437 (569)
T ss_dssp ---CC-SHHHHHHHHHHHHHHC------------------CCCCTTHHH
T ss_pred CCCcc-ccCceechhhccHHHhCC-CCCCcccccccccchhhhccccch
Confidence 44332 233459999999999976 456789999999998877665443
No 252
>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*
Probab=99.92 E-value=3.2e-26 Score=245.51 Aligned_cols=183 Identities=17% Similarity=0.204 Sum_probs=145.5
Q ss_pred hcccCCCCceEEEEEEEcCCcEEEEEEccCccc--------hhHHHHHHHHHHHhhcCCCCccceeeEEEecCeeEEEEE
Q 008707 240 CKKIGKGSFGSVYYGKMKDGKEVAVKIMADSCS--------HRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYE 311 (557)
Q Consensus 240 ~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~--------~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~lv~e 311 (557)
.+.||+|+||.||+|... ++.+++|+...... ...+.+.+|++++++++||||+++..++...+..++|||
T Consensus 341 ~~~LG~G~fg~Vy~~~~~-~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~lVmE 419 (540)
T 3en9_A 341 EHLIGKGAEADIKRDSYL-DFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVKDFGIPAPYIFDVDLDNKRIMMS 419 (540)
T ss_dssp -------CCEEEEEEECS-SCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHGGGGTCCCCCEEEEETTTTEEEEE
T ss_pred CCEEeeCCCEEEEEEEEC-CCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhcCCCCcCceEEEEEeCCccEEEEE
Confidence 578999999999999554 78889987543211 123458999999999999999977777667778899999
Q ss_pred ecCCCChhhhhhccCCCCCcCHHHHHHHHHHHHHHHHHHHcCCCCCeEeeccCCCCEEeCCCCcEEEecccCccccCCCC
Q 008707 312 YMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEEDL 391 (557)
Q Consensus 312 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfgla~~~~~~~ 391 (557)
|+++++|.+++.. +..++.|+++||+|||+ ++|+||||||+|||++. .+||+|||+++......
T Consensus 420 ~~~ggsL~~~l~~-----------~~~i~~qi~~aL~~LH~---~gIiHrDiKp~NILl~~--~~kL~DFGla~~~~~~~ 483 (540)
T 3en9_A 420 YINGKLAKDVIED-----------NLDIAYKIGEIVGKLHK---NDVIHNDLTTSNFIFDK--DLYIIDFGLGKISNLDE 483 (540)
T ss_dssp CCCSEEHHHHSTT-----------CTHHHHHHHHHHHHHHH---TTEECTTCCTTSEEESS--SEEECCCTTCEECCCHH
T ss_pred CCCCCCHHHHHHH-----------HHHHHHHHHHHHHHHHH---CcCccCCCCHHHEEECC--eEEEEECccCEECCCcc
Confidence 9999999999873 45899999999999998 99999999999999998 99999999999875532
Q ss_pred ccc------cccccCCCCccCCcccCC--CCCCcccceehhHHHHHHHHhCCCCCC
Q 008707 392 THI------SSVARGTVGYLDPEYYGN--QQLTEKSDVYSFGVVLLELISGKKPVS 439 (557)
Q Consensus 392 ~~~------~~~~~g~~~y~aPE~l~~--~~~s~~~DvwslG~ll~elltg~~pf~ 439 (557)
... .....||+.|+|||++.. ..|+...|+|+..+-..+-+.++.+|.
T Consensus 484 ~~~~~~~~~~~~~~GT~~y~APEv~~~~~~~Y~~~~d~ws~vl~~l~~v~~r~rY~ 539 (540)
T 3en9_A 484 DKAVDLIVFKKAVLSTHHEKFDEIWERFLEGYKSVYDRWEIILELMKDVERRARYV 539 (540)
T ss_dssp HHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHTCSCCC
T ss_pred ccccchhhhhhhhcCCCCcCCHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhccccC
Confidence 221 234568999999999987 567888999999888888887776663
No 253
>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*
Probab=99.88 E-value=2e-23 Score=205.46 Aligned_cols=140 Identities=15% Similarity=0.112 Sum_probs=114.9
Q ss_pred hcccCCCCceEEEEEEEcCCcEEEEEEccCccc------------------hhHHHHHHHHHHHhhcCCCCccceeeEEE
Q 008707 240 CKKIGKGSFGSVYYGKMKDGKEVAVKIMADSCS------------------HRTQQFVTEVALLSRIHHRNLVPLIGYCE 301 (557)
Q Consensus 240 ~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~------------------~~~~~~~~E~~il~~l~h~nIv~~~~~~~ 301 (557)
.+.||+|+||.||+|.+.+|+.||+|+++.... .....+.+|+++++.++ | +++.+++.
T Consensus 95 ~~~iG~G~~g~Vy~~~~~~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~~l~--~-~~v~~~~~ 171 (282)
T 1zar_A 95 GKLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQ--G-LAVPKVYA 171 (282)
T ss_dssp EEEEEECSSEEEEEEEETTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTT--T-SSSCCEEE
T ss_pred cCEeccCCCceEEEEEeCCCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHHhcc--C-CCcCeEEe
Confidence 488999999999999987799999999864321 13456889999999999 5 67777654
Q ss_pred ecCeeEEEEEecCCCChhhhhhccCCCCCcCHHHHHHHHHHHHHHHHHHHcCCCCCeEeeccCCCCEEeCCCCcEEEecc
Q 008707 302 EEHQRILVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDF 381 (557)
Q Consensus 302 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Df 381 (557)
. +..++||||++|++|.+ +.. .....++.|++.||+|||+ .||+||||||+|||++ ++.+||+||
T Consensus 172 ~-~~~~lvmE~~~g~~L~~-l~~---------~~~~~i~~qi~~~l~~lH~---~giiHrDlkp~NILl~-~~~vkl~DF 236 (282)
T 1zar_A 172 W-EGNAVLMELIDAKELYR-VRV---------ENPDEVLDMILEEVAKFYH---RGIVHGDLSQYNVLVS-EEGIWIIDF 236 (282)
T ss_dssp E-ETTEEEEECCCCEEGGG-CCC---------SCHHHHHHHHHHHHHHHHH---TTEECSCCSTTSEEEE-TTEEEECCC
T ss_pred c-cceEEEEEecCCCcHHH-cch---------hhHHHHHHHHHHHHHHHHH---CCCEeCCCCHHHEEEE-CCcEEEEEC
Confidence 4 56799999999999988 431 1244799999999999998 9999999999999999 999999999
Q ss_pred cCccccCCCCccccccccCCCCccCCcccC
Q 008707 382 GLSRQAEEDLTHISSVARGTVGYLDPEYYG 411 (557)
Q Consensus 382 gla~~~~~~~~~~~~~~~g~~~y~aPE~l~ 411 (557)
|+++. +..+.|||.+.
T Consensus 237 G~a~~--------------~~~~~a~e~l~ 252 (282)
T 1zar_A 237 PQSVE--------------VGEEGWREILE 252 (282)
T ss_dssp TTCEE--------------TTSTTHHHHHH
T ss_pred CCCeE--------------CCCCCHHHHHH
Confidence 99863 34567888764
No 254
>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*
Probab=99.79 E-value=1.9e-19 Score=174.68 Aligned_cols=135 Identities=23% Similarity=0.247 Sum_probs=104.4
Q ss_pred hhcccCCCCceEEEEEEE-cCCcE--EEEEEccCccch------------------------hHHHHHHHHHHHhhcCCC
Q 008707 239 FCKKIGKGSFGSVYYGKM-KDGKE--VAVKIMADSCSH------------------------RTQQFVTEVALLSRIHHR 291 (557)
Q Consensus 239 ~~~~lG~G~~g~Vy~~~~-~~~~~--vavK~~~~~~~~------------------------~~~~~~~E~~il~~l~h~ 291 (557)
+.+.||+|+||.||+|.+ .+|+. ||||+++..... ....+.+|++++..+.|+
T Consensus 51 i~~~ig~G~~g~Vy~a~~~~~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~ 130 (258)
T 1zth_A 51 MGGVISTGKEANVFYADGVFDGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWTEKEFRNLERAKEA 130 (258)
T ss_dssp EEEEEEECSSEEEEEEEEEETTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHHHHHHHHHHHHHHHHT
T ss_pred hCCEEeecceEEEEEEEEcCCCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHHHHHHHHHHHHHHHhC
Confidence 457899999999999988 67888 999986542111 113678899999999888
Q ss_pred Cc--cceeeEEEecCeeEEEEEecCC-C----ChhhhhhccCCCCCcCHHHHHHHHHHHHHHHHHHH-cCCCCCeEeecc
Q 008707 292 NL--VPLIGYCEEEHQRILVYEYMHN-G----TLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLH-TGCNPGIIHRDV 363 (557)
Q Consensus 292 nI--v~~~~~~~~~~~~~lv~e~~~~-g----sL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH-~~~~~~ivH~dl 363 (557)
++ +.+++. +..++||||+.+ | +|.+.... .++..+..++.|++.||.||| + .||+||||
T Consensus 131 ~i~~p~~~~~----~~~~lVmE~~g~~g~~~~~L~~~~~~------~~~~~~~~i~~qi~~~l~~lH~~---~givHrDl 197 (258)
T 1zth_A 131 GVSVPQPYTY----MKNVLLMEFIGEDELPAPTLVELGRE------LKELDVEGIFNDVVENVKRLYQE---AELVHADL 197 (258)
T ss_dssp TCCCCCEEEE----ETTEEEEECCEETTEECCBHHHHGGG------GGGSCHHHHHHHHHHHHHHHHHT---SCEECSSC
T ss_pred CCCCCeEEEc----CCCEEEEEecCCCCCccccHHHHhhc------cChHHHHHHHHHHHHHHHHHHHH---CCEEeCCC
Confidence 64 333332 357899999942 4 66665432 223456789999999999999 7 99999999
Q ss_pred CCCCEEeCCCCcEEEecccCccccC
Q 008707 364 KSSNILLDINMRAKVSDFGLSRQAE 388 (557)
Q Consensus 364 k~~NIll~~~~~~kl~Dfgla~~~~ 388 (557)
||.|||++. .++|+|||+|....
T Consensus 198 kp~NILl~~--~~~liDFG~a~~~~ 220 (258)
T 1zth_A 198 SEYNIMYID--KVYFIDMGQAVTLR 220 (258)
T ss_dssp STTSEEESS--SEEECCCTTCEETT
T ss_pred CHHHEEEcC--cEEEEECcccccCC
Confidence 999999998 99999999997653
No 255
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=99.69 E-value=2.9e-17 Score=164.15 Aligned_cols=141 Identities=28% Similarity=0.535 Sum_probs=121.4
Q ss_pred HHHHHhhhhcC----CCCCCC-CCCCCCCCCeEEeeCC-CCCceEEEEecCCCccc--cCCccccCCCCCcEEECcC-CC
Q 008707 4 EALRSISDESE----RTNDRG-DPCVPVPWEWVTCSTT-TPPRITKIALSGKNLKG--EIPPELKNMEALTELWLDG-NF 74 (557)
Q Consensus 4 ~~~~~~~~~~~----~~~~~~-~~c~~~~~~~v~c~~~-~p~~l~~L~L~~n~l~~--~~p~~~~~l~~L~~L~l~~-N~ 74 (557)
.||.++|+++. +.+|+. ++||.+.|.||+|... ...+++.|+|++|+++| .+|..+.++++|+.|+|++ |.
T Consensus 9 ~aL~~~k~~~~~~~~l~~W~~~~~~C~~~w~gv~C~~~~~~~~l~~L~L~~~~l~~~~~~~~~l~~l~~L~~L~L~~~n~ 88 (313)
T 1ogq_A 9 QALLQIKKDLGNPTTLSSWLPTTDCCNRTWLGVLCDTDTQTYRVNNLDLSGLNLPKPYPIPSSLANLPYLNFLYIGGINN 88 (313)
T ss_dssp HHHHHHHHHTTCCGGGTTCCTTSCTTTTCSTTEEECCSSSCCCEEEEEEECCCCSSCEECCGGGGGCTTCSEEEEEEETT
T ss_pred HHHHHHHHhcCCcccccCCCCCCCCCcCCCcceEeCCCCCCceEEEEECCCCCccCCcccChhHhCCCCCCeeeCCCCCc
Confidence 57888888873 458963 3455567999999763 23689999999999999 8999999999999999995 99
Q ss_pred CCCCCC-CccCCCCCcEEEecCccccCcCCCccCCCCcccccccccccCCCCCCcccc--cCceeeeecCCCc
Q 008707 75 LTGPLP-DMSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELHIENNSFVGEIPPALL--TGKVIFKYDNNPK 144 (557)
Q Consensus 75 l~~~~~-~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~l~l~~N~~~~~~p~~~~--~~~~~~~~~~n~~ 144 (557)
+.+.+| .|.++++|++|+|++|++++.+|..+..+++|++|++++|++.+.+|..+. ..+..+.+++|..
T Consensus 89 l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l 161 (313)
T 1ogq_A 89 LVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPNLVGITFDGNRI 161 (313)
T ss_dssp EESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCEEECCSSEEESCCCGGGGGCTTCCEEECCSSCC
T ss_pred ccccCChhHhcCCCCCEEECcCCeeCCcCCHHHhCCCCCCEEeCCCCccCCcCChHHhcCCCCCeEECcCCcc
Confidence 999888 699999999999999999999999999999999999999999988998764 3567778888864
No 256
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.68 E-value=9e-17 Score=148.64 Aligned_cols=122 Identities=23% Similarity=0.299 Sum_probs=109.3
Q ss_pred CCCCCeEEeeC--------CCCCceEEEEecCCCccccCCccccCCCCCcEEECcCCCCCCCCC-CccCCCCCcEEEecC
Q 008707 25 PVPWEWVTCST--------TTPPRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLP-DMSRLIDLRIVHLEN 95 (557)
Q Consensus 25 ~~~~~~v~c~~--------~~p~~l~~L~L~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~-~~~~l~~L~~L~l~~ 95 (557)
.|.|..|.|+. ..|++|+.|+|++|.|+ .+|..|.++++|+.|+|++|+|+++++ .|.++++|+.|+|++
T Consensus 9 ~C~~~~l~~~~~~l~~ip~~~~~~l~~L~L~~n~i~-~ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~ 87 (193)
T 2wfh_A 9 TCLDTVVRCSNKGLKVLPKGIPRDVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSY 87 (193)
T ss_dssp EEETTEEECTTSCCSSCCSCCCTTCCEEECCSSCCC-SCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred EeCCCEEEcCCCCCCcCCCCCCCCCCEEECCCCcCc-hhHHHhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCC
Confidence 56788899976 34678999999999999 899999999999999999999999988 599999999999999
Q ss_pred ccccCcCCCccCCCCcccccccccccCCCCCCccccc---CceeeeecCCCccccc
Q 008707 96 NELTGSLPSYMGSLPNLQELHIENNSFVGEIPPALLT---GKVIFKYDNNPKLHKE 148 (557)
Q Consensus 96 N~l~~~~p~~~~~l~~L~~l~l~~N~~~~~~p~~~~~---~~~~~~~~~n~~~~~~ 148 (557)
|+|++..|..|..+++|+.|++++|+|+ .+|...+. .+..+.+.+||+.|++
T Consensus 88 N~l~~i~~~~f~~l~~L~~L~L~~N~l~-~~~~~~~~~l~~L~~L~L~~N~~~C~c 142 (193)
T 2wfh_A 88 NRLRCIPPRTFDGLKSLRLLSLHGNDIS-VVPEGAFNDLSALSHLAIGANPLYCDC 142 (193)
T ss_dssp SCCCBCCTTTTTTCTTCCEEECCSSCCC-BCCTTTTTTCTTCCEEECCSSCEECSG
T ss_pred CccCEeCHHHhCCCCCCCEEECCCCCCC-eeChhhhhcCccccEEEeCCCCeecCC
Confidence 9999777778999999999999999999 78887554 5577899999999975
No 257
>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A
Probab=99.65 E-value=2.6e-16 Score=158.94 Aligned_cols=138 Identities=16% Similarity=0.152 Sum_probs=99.4
Q ss_pred HHhhcccCCCCceEEEEEEEcCCcEEEEEEccCccc--------------hhHH--------HHHHHHHHHhhcCCCCcc
Q 008707 237 NNFCKKIGKGSFGSVYYGKMKDGKEVAVKIMADSCS--------------HRTQ--------QFVTEVALLSRIHHRNLV 294 (557)
Q Consensus 237 ~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~--------------~~~~--------~~~~E~~il~~l~h~nIv 294 (557)
|++...||+|+||.||+|...+|+.||||+++.... .... ...+|+..|.++.+.++.
T Consensus 97 Y~I~~~IG~Gk~a~VY~a~d~~G~~vAvKi~r~~~~sfr~v~~~r~~~~~~~~~~~~~~~rl~A~kE~~nL~rL~~~gv~ 176 (397)
T 4gyi_A 97 YSVGSRIGVGKESDIMIVADEKGKQKVLKIHRLGRISFRTVKANRDYLRNRSTGSWMYLSRLAAIKEFAFMKALYEEGFP 176 (397)
T ss_dssp SEEEEEEEECSSEEEEEEECTTCCEEEEEEECTTEECCCCCC--CEECTTSCHHHHHHHHHHHHHHHHHHHHHHHHTTCS
T ss_pred EEecCEeeeCCceEEEEEECCCCCEEEEEEEecccccHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 345678999999999999999999999998753210 0001 123566677777544432
Q ss_pred ceeeEEEecCeeEEEEEecCCCChhhhhhccCCCCCcCHHHHHHHHHHHHHHHHHHHcCCCCCeEeeccCCCCEEeCCCC
Q 008707 295 PLIGYCEEEHQRILVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINM 374 (557)
Q Consensus 295 ~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~dlk~~NIll~~~~ 374 (557)
...-+.. ...++||||++|++|.+.... .....++.|++.+|.+||+ .|||||||||.|||+++++
T Consensus 177 vp~p~~~--~~~~LVME~i~G~~L~~l~~~---------~~~~~l~~qll~~l~~lH~---~gIVHrDLKp~NILl~~dg 242 (397)
T 4gyi_A 177 VPEPIAQ--SRHTIVMSLVDALPMRQVSSV---------PDPASLYADLIALILRLAK---HGLIHGDFNEFNILIREEK 242 (397)
T ss_dssp CCCEEEE--ETTEEEEECCSCEEGGGCCCC---------SCHHHHHHHHHHHHHHHHH---TTEECSCCSTTSEEEEEEE
T ss_pred CCeeeec--cCceEEEEecCCccHhhhccc---------HHHHHHHHHHHHHHHHHHH---CCCcCCCCCHHHEEEeCCC
Confidence 2221211 234799999999888765431 1235688999999999998 9999999999999998776
Q ss_pred ----------cEEEecccCccccC
Q 008707 375 ----------RAKVSDFGLSRQAE 388 (557)
Q Consensus 375 ----------~~kl~Dfgla~~~~ 388 (557)
.+.|+||+-+....
T Consensus 243 d~~d~~~~~~~~~iID~~Q~V~~~ 266 (397)
T 4gyi_A 243 DAEDPSSITLTPIIIXFPQMVSMD 266 (397)
T ss_dssp CSSCTTSEEEEEEECCCTTCEETT
T ss_pred CcccccccccceEEEEeCCcccCC
Confidence 38999999776543
No 258
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.63 E-value=9.6e-16 Score=145.81 Aligned_cols=104 Identities=23% Similarity=0.329 Sum_probs=83.3
Q ss_pred CCCCeEEeeC--------CCCCceEEEEecCCCccccCCccccCCCCCcEEECcCCCCCCCCCC-ccCCCCCcEEEecCc
Q 008707 26 VPWEWVTCST--------TTPPRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPD-MSRLIDLRIVHLENN 96 (557)
Q Consensus 26 ~~~~~v~c~~--------~~p~~l~~L~L~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~-~~~l~~L~~L~l~~N 96 (557)
|+|++|.|+. +.|++|+.|+|++|+|++..|..|.++++|+.|+|++|+|+.+++. |..+++|+.|+|++|
T Consensus 19 Cs~~~v~c~~~~l~~ip~~~~~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~N 98 (229)
T 3e6j_A 19 CSGTTVDCRSKRHASVPAGIPTNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLGALPVGVFDSLTQLTVLDLGTN 98 (229)
T ss_dssp EETTEEECTTSCCSSCCSCCCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred EeCCEeEccCCCcCccCCCCCCCCCEEEcCCCccCccCHHHhhCccCCcEEECCCCCCCCcChhhcccCCCcCEEECCCC
Confidence 3799999987 3467899999999999977788888889999999999998877774 788888888888888
Q ss_pred cccCcCCCccCCCCcccccccccccCCCCCCccc
Q 008707 97 ELTGSLPSYMGSLPNLQELHIENNSFVGEIPPAL 130 (557)
Q Consensus 97 ~l~~~~p~~~~~l~~L~~l~l~~N~~~~~~p~~~ 130 (557)
+|++..+..|..+++|+.|++++|+|. .+|..+
T Consensus 99 ~l~~l~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~ 131 (229)
T 3e6j_A 99 QLTVLPSAVFDRLVHLKELFMCCNKLT-ELPRGI 131 (229)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCCC-SCCTTG
T ss_pred cCCccChhHhCcchhhCeEeccCCccc-ccCccc
Confidence 888544555677777777777777777 676654
No 259
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.63 E-value=6e-16 Score=142.97 Aligned_cols=126 Identities=19% Similarity=0.233 Sum_probs=108.6
Q ss_pred CCCCCCCCeEEeeCC--------CCCceEEEEecCCCccccCCc-cccCCCCCcEEECcCCCCCCCCC-CccCCCCCcEE
Q 008707 22 PCVPVPWEWVTCSTT--------TPPRITKIALSGKNLKGEIPP-ELKNMEALTELWLDGNFLTGPLP-DMSRLIDLRIV 91 (557)
Q Consensus 22 ~c~~~~~~~v~c~~~--------~p~~l~~L~L~~n~l~~~~p~-~~~~l~~L~~L~l~~N~l~~~~~-~~~~l~~L~~L 91 (557)
.| .|.|+.+.|+.. .|.+++.|+|++|+|++..+. .|..+++|+.|+|++|+|++.+| .|.++++|+.|
T Consensus 5 ~C-~C~~~~l~~s~~~l~~ip~~~~~~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L 83 (192)
T 1w8a_A 5 MC-HCEGTTVDCTGRGLKEIPRDIPLHTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQEL 83 (192)
T ss_dssp TS-EEETTEEECTTSCCSSCCSCCCTTCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEE
T ss_pred CC-EECCCEEEcCCCCcCcCccCCCCCCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccCCEE
Confidence 35 578999999872 456899999999999955554 38999999999999999999988 59999999999
Q ss_pred EecCccccCcCCCccCCCCcccccccccccCCCCCCcccc--cCceeeeecCCCccccc
Q 008707 92 HLENNELTGSLPSYMGSLPNLQELHIENNSFVGEIPPALL--TGKVIFKYDNNPKLHKE 148 (557)
Q Consensus 92 ~l~~N~l~~~~p~~~~~l~~L~~l~l~~N~~~~~~p~~~~--~~~~~~~~~~n~~~~~~ 148 (557)
+|++|+|++..|..|..+++|+.|++++|+|++.+|..+. ..+..+.+++|++.|+.
T Consensus 84 ~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c 142 (192)
T 1w8a_A 84 QLGENKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCNC 142 (192)
T ss_dssp ECCSCCCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBCCSG
T ss_pred ECCCCcCCccCHHHhcCCCCCCEEECCCCcCCeeCHHHhhcCCCCCEEEeCCCCccCcC
Confidence 9999999977788899999999999999999966666553 35678899999999874
No 260
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.62 E-value=1.9e-15 Score=137.61 Aligned_cols=125 Identities=20% Similarity=0.307 Sum_probs=107.7
Q ss_pred CCCCCCCCeEEeeC--------CCCCceEEEEecCCCccccCCccccCCCCCcEEECcCCCCCCCCCC-ccCCCCCcEEE
Q 008707 22 PCVPVPWEWVTCST--------TTPPRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPD-MSRLIDLRIVH 92 (557)
Q Consensus 22 ~c~~~~~~~v~c~~--------~~p~~l~~L~L~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~-~~~l~~L~~L~ 92 (557)
.| .|.|++|.|+. ..+++|+.|+|++|++++..+..|.++++|+.|+|++|+|++.++. |..+++|+.|+
T Consensus 4 ~C-~C~~~~l~~~~~~l~~~p~~~~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ 82 (177)
T 2o6r_A 4 RC-SCSGTEIRCNSKGLTSVPTGIPSSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDGVFDKLTKLTILY 82 (177)
T ss_dssp TC-EEETTEEECCSSCCSSCCTTCCTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred CC-EeCCCEEEecCCCCccCCCCCCCCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcceEeChhHccCCCccCEEE
Confidence 46 57899999987 2367899999999999966666789999999999999999998885 89999999999
Q ss_pred ecCccccCcCCCccCCCCcccccccccccCCCCCCccccc---CceeeeecCCCccccc
Q 008707 93 LENNELTGSLPSYMGSLPNLQELHIENNSFVGEIPPALLT---GKVIFKYDNNPKLHKE 148 (557)
Q Consensus 93 l~~N~l~~~~p~~~~~l~~L~~l~l~~N~~~~~~p~~~~~---~~~~~~~~~n~~~~~~ 148 (557)
|++|+|++..+..+..+++|+.|++++|+++ .+|...+. .+..+.+.+|++.|..
T Consensus 83 l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~-~~~~~~~~~l~~L~~L~l~~N~~~~~~ 140 (177)
T 2o6r_A 83 LHENKLQSLPNGVFDKLTQLKELALDTNQLK-SVPDGIFDRLTSLQKIWLHTNPWDCSC 140 (177)
T ss_dssp CCSSCCCCCCTTTTTTCTTCCEEECCSSCCS-CCCTTTTTTCTTCCEEECCSSCBCCCH
T ss_pred CCCCCccccCHHHhhCCcccCEEECcCCcce-EeCHHHhcCCcccCEEEecCCCeeccC
Confidence 9999999666666889999999999999999 78877643 5677889999998853
No 261
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=99.61 E-value=6.6e-16 Score=173.26 Aligned_cols=139 Identities=20% Similarity=0.281 Sum_probs=118.5
Q ss_pred HHHHHHhhhhcCCCCCCCCC------CCCCCC------------CeEEeeCCCCCceEEEEecCCCccccCCccccCCCC
Q 008707 3 LEALRSISDESERTNDRGDP------CVPVPW------------EWVTCSTTTPPRITKIALSGKNLKGEIPPELKNMEA 64 (557)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~------c~~~~~------------~~v~c~~~~p~~l~~L~L~~n~l~~~~p~~~~~l~~ 64 (557)
..||+++++++.-.+|+.+. |++|.| .||+|++. .+++.|+|++|+++|.+|++|++|++
T Consensus 271 ~~ALl~~k~~l~~~~W~~~~~~~~~~~~~C~W~~~~~~~~w~~~~GV~C~~~--~~V~~L~Ls~~~L~G~ip~~l~~L~~ 348 (876)
T 4ecn_A 271 YKALKAIWEALDGKNWRYYSGTINNTIHSLNWNFNKELDMWGDQPGVDLDNN--GRVTGLSLAGFGAKGRVPDAIGQLTE 348 (876)
T ss_dssp HHHHHHHHHHTTGGGCCCCCSSCSSCCCCCSCCCSSCGGGTTCCTTEEECTT--SCEEEEECTTTCCEEEECGGGGGCTT
T ss_pred HHHHHHHHHHcCCCCCCcCCCcccccCCccccccccccccccCcCceEecCC--CCEEEEECccCCCCCcCchHHhcccc
Confidence 36899999998666895322 335789 99999873 68999999999999999999999999
Q ss_pred CcEEEC-cCCCCCCC-----------------------------------------------------------------
Q 008707 65 LTELWL-DGNFLTGP----------------------------------------------------------------- 78 (557)
Q Consensus 65 L~~L~l-~~N~l~~~----------------------------------------------------------------- 78 (557)
|+.|+| ++|.++|.
T Consensus 349 L~~LdLss~N~lsG~~~~~~~~~~~~l~~~~l~~lr~~~~~~~l~~~~~~~~s~l~~~~l~~~~~~~~i~~~~~l~l~~l 428 (876)
T 4ecn_A 349 LKVLSFGTHSETVSGRLFGDEELTPDMSEERKHRIRMHYKKMFLDYDQRLNLSDLLQDAINRNPEMKPIKKDSRISLKDT 428 (876)
T ss_dssp CCEEESCCTTHHHHTTCBTTBCCCSSCCHHHHHHHHTHHHHHHTCCCGGGGSCHHHHHHHHTCTTSCCCCCCCCCCCCTT
T ss_pred ceEeeecccccccccccccccccccccchhHHHHHHHhhhhhhhccCcchhhhHHHHHHhhhCccccccccccccchhhc
Confidence 999999 77765443
Q ss_pred -----------CC-CccCCCCCcEEEecCccccC-----------------cCCCccC--CCCcccccccccccCCCCCC
Q 008707 79 -----------LP-DMSRLIDLRIVHLENNELTG-----------------SLPSYMG--SLPNLQELHIENNSFVGEIP 127 (557)
Q Consensus 79 -----------~~-~~~~l~~L~~L~l~~N~l~~-----------------~~p~~~~--~l~~L~~l~l~~N~~~~~~p 127 (557)
+| .|+++++|+.|+|++|+|+| .+|..++ ++++|+.|++++|++.|.+|
T Consensus 429 ~l~~~~N~L~~IP~~l~~L~~L~~L~Ls~N~Lsg~~i~~~~~~~s~n~~~g~iP~~l~f~~L~~L~~L~Ls~N~l~~~iP 508 (876)
T 4ecn_A 429 QIGNLTNRITFISKAIQRLTKLQIIYFANSPFTYDNIAVDWEDANSDYAKQYENEELSWSNLKDLTDVELYNCPNMTQLP 508 (876)
T ss_dssp TTTCCSCEEEEECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEESCTTCCSCC
T ss_pred eeccccCcccchhHHHhcCCCCCEEECcCCcCCCCcccccccccccccccccCChhhhhccCCCCCEEECcCCCCCccCh
Confidence 55 68999999999999999997 3999988 99999999999999999999
Q ss_pred ccccc--CceeeeecCCC
Q 008707 128 PALLT--GKVIFKYDNNP 143 (557)
Q Consensus 128 ~~~~~--~~~~~~~~~n~ 143 (557)
..+.. .+..+.+++|.
T Consensus 509 ~~l~~L~~L~~L~Ls~N~ 526 (876)
T 4ecn_A 509 DFLYDLPELQSLNIACNR 526 (876)
T ss_dssp GGGGGCSSCCEEECTTCT
T ss_pred HHHhCCCCCCEEECcCCC
Confidence 87754 56778888887
No 262
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.57 E-value=6.2e-15 Score=139.22 Aligned_cols=100 Identities=26% Similarity=0.358 Sum_probs=57.9
Q ss_pred CCCCCCCCeEEeeC--------CCCCceEEEEecCCCccccCCccccCCCCCcEEECcCCCCCCCCC-CccCCCCCcEEE
Q 008707 22 PCVPVPWEWVTCST--------TTPPRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLP-DMSRLIDLRIVH 92 (557)
Q Consensus 22 ~c~~~~~~~v~c~~--------~~p~~l~~L~L~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~-~~~~l~~L~~L~ 92 (557)
.| .|.|..|.|+. ..|++++.|+|++|+|++..+..|.++++|+.|+|++|+|+++.| .|.++++|+.|+
T Consensus 8 ~C-~C~~~~v~c~~~~l~~iP~~l~~~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~ 86 (220)
T 2v9t_B 8 AC-TCSNNIVDCRGKGLTEIPTNLPETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLV 86 (220)
T ss_dssp TS-EEETTEEECTTSCCSSCCSSCCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCEECTTTTTTCSSCCEEE
T ss_pred CC-EECCCEEEcCCCCcCcCCCccCcCCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCCcCHHHhhCCcCCCEEE
Confidence 35 56888999976 234566677777776664444456666666666666666666554 355555555555
Q ss_pred ecCccccCcCCC-ccCCCCcccccccccccCC
Q 008707 93 LENNELTGSLPS-YMGSLPNLQELHIENNSFV 123 (557)
Q Consensus 93 l~~N~l~~~~p~-~~~~l~~L~~l~l~~N~~~ 123 (557)
|++|+|+ .+|. .|..+++|+.|++++|+|.
T Consensus 87 Ls~N~l~-~l~~~~f~~l~~L~~L~L~~N~l~ 117 (220)
T 2v9t_B 87 LYGNKIT-ELPKSLFEGLFSLQLLLLNANKIN 117 (220)
T ss_dssp CCSSCCC-CCCTTTTTTCTTCCEEECCSSCCC
T ss_pred CCCCcCC-ccCHhHccCCCCCCEEECCCCCCC
Confidence 5555555 3332 2344444444444444444
No 263
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=99.56 E-value=4e-15 Score=163.12 Aligned_cols=135 Identities=21% Similarity=0.263 Sum_probs=114.5
Q ss_pred HHHHHhhhhcCCC-------------CCCC-CCCCCCCC---CeEEeeCCCCCceEEEEecCCCccccCCccccCCCCCc
Q 008707 4 EALRSISDESERT-------------NDRG-DPCVPVPW---EWVTCSTTTPPRITKIALSGKNLKGEIPPELKNMEALT 66 (557)
Q Consensus 4 ~~~~~~~~~~~~~-------------~~~~-~~c~~~~~---~~v~c~~~~p~~l~~L~L~~n~l~~~~p~~~~~l~~L~ 66 (557)
.||+++++++... +|+. .+| |.| .||+|+.. .+++.|+|++|+++|.+|++|++|++|+
T Consensus 33 ~aL~~~~~~~~~~~w~~~~~~~~~~~~W~~~~~~--c~w~~~~GV~C~~~--~~V~~L~L~~~~l~g~lp~~l~~L~~L~ 108 (636)
T 4eco_A 33 LALKEIWDALNGKNWSQQGFGTQPGANWNFNKEL--DMWGAQPGVSLNSN--GRVTGLSLEGFGASGRVPDAIGQLTELE 108 (636)
T ss_dssp HHHHHHHHHTTGGGCCCCC------CCCCCSSCG--GGTTCCTTEEECTT--CCEEEEECTTSCCEEEECGGGGGCTTCC
T ss_pred HHHHHHHHHcCCCCcccCCcCCccCCCCCCCCCc--ccccCCCCeEEcCC--CCEEEEEecCcccCCcCChHHhcCccce
Confidence 5788888877432 5753 223 369 99999875 5899999999999999999999999999
Q ss_pred EEECcCCC------------------------------------------------------------------------
Q 008707 67 ELWLDGNF------------------------------------------------------------------------ 74 (557)
Q Consensus 67 ~L~l~~N~------------------------------------------------------------------------ 74 (557)
.|+|++|.
T Consensus 109 ~L~Ls~N~~~~~~~~~~~~~~~~~~~~~~~~~l~l~l~~~~l~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~l~~l~l 188 (636)
T 4eco_A 109 VLALGSHGEKVNERLFGPKGISANMSDEQKQKMRMHYQKTFVDYDPREDFSDLIKDCINSDPQQKSIKKSSRITLKDTQI 188 (636)
T ss_dssp EEESCCGGGGGTCCSBSTTSBCTTCCHHHHHHHHTHHHHHHTCCCGGGGSCHHHHHHHHHCTTSCCCCCCCCCCCCTTTT
T ss_pred EEECcCCccccCCccccccccccCchHHHHHHHHhhHHHhhhccCchhhHHHHHHHHhhcCccccccccccccchhhhhh
Confidence 99999984
Q ss_pred ------CCCCCC-CccCCCCCcEEEecCccccCc-----------------CCCccC--CCCcccccccccccCCCCCCc
Q 008707 75 ------LTGPLP-DMSRLIDLRIVHLENNELTGS-----------------LPSYMG--SLPNLQELHIENNSFVGEIPP 128 (557)
Q Consensus 75 ------l~~~~~-~~~~l~~L~~L~l~~N~l~~~-----------------~p~~~~--~l~~L~~l~l~~N~~~~~~p~ 128 (557)
|++ +| .|+++++|+.|+|++|+|+|. +|..++ ++++|++|++++|++.|.+|.
T Consensus 189 ~~~~n~l~~-ip~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~~~~~ip~~l~~~~l~~L~~L~L~~n~l~~~~p~ 267 (636)
T 4eco_A 189 GQLSNNITF-VSKAVMRLTKLRQFYMGNSPFVAENICEAWENENSEYAQQYKTEDLKWDNLKDLTDVEVYNCPNLTKLPT 267 (636)
T ss_dssp TCCSCEEEE-ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEECCTTCSSCCT
T ss_pred ccccCCCcc-CCHHHhcccCCCEEECcCCccccccccccccccccchhcccCchhhhhcccCCCCEEEecCCcCCccChH
Confidence 445 45 699999999999999999975 999999 999999999999999999998
Q ss_pred cccc--CceeeeecCCC
Q 008707 129 ALLT--GKVIFKYDNNP 143 (557)
Q Consensus 129 ~~~~--~~~~~~~~~n~ 143 (557)
.+.. .+..+.+++|.
T Consensus 268 ~l~~l~~L~~L~Ls~n~ 284 (636)
T 4eco_A 268 FLKALPEMQLINVACNR 284 (636)
T ss_dssp TTTTCSSCCEEECTTCT
T ss_pred HHhcCCCCCEEECcCCC
Confidence 7754 56777888887
No 264
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=99.52 E-value=5.8e-15 Score=165.51 Aligned_cols=110 Identities=32% Similarity=0.451 Sum_probs=102.5
Q ss_pred CceEEEEecCCCccccCCccccCCCCCcEEECcCCCCCCCCC-CccCCCCCcEEEecCccccCcCCCccCCCCccccccc
Q 008707 39 PRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLP-DMSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELHI 117 (557)
Q Consensus 39 ~~l~~L~L~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~-~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~l~l 117 (557)
++|+.|+|++|+++|.+|.+++++++|+.|+|++|+|+|.+| .|+++++|+.|||++|+++|.+|..+..+++|+.|++
T Consensus 632 ~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~ip~~l~~L~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~l 711 (768)
T 3rgz_A 632 GSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEIDL 711 (768)
T ss_dssp BCCCEEECCSSCCBSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEECCCGGGGGCCCCSEEEC
T ss_pred ccccEEECcCCcccccCCHHHhccccCCEEeCcCCccCCCCChHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEEC
Confidence 578999999999999999999999999999999999999999 6999999999999999999999999999999999999
Q ss_pred ccccCCCCCCcc-cccCceeeeecCCCccccc
Q 008707 118 ENNSFVGEIPPA-LLTGKVIFKYDNNPKLHKE 148 (557)
Q Consensus 118 ~~N~~~~~~p~~-~~~~~~~~~~~~n~~~~~~ 148 (557)
++|+++|.||.. .+.......+.|||++|+.
T Consensus 712 s~N~l~g~iP~~~~~~~~~~~~~~gN~~Lcg~ 743 (768)
T 3rgz_A 712 SNNNLSGPIPEMGQFETFPPAKFLNNPGLCGY 743 (768)
T ss_dssp CSSEEEEECCSSSSGGGSCGGGGCSCTEEEST
T ss_pred cCCcccccCCCchhhccCCHHHhcCCchhcCC
Confidence 999999999975 4555666789999999974
No 265
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.51 E-value=2.8e-14 Score=128.96 Aligned_cols=103 Identities=27% Similarity=0.340 Sum_probs=81.8
Q ss_pred EEEEecCCCccccCCccccCCCCCcEEECcCCCCCCCCC-CccCCCCCcEEEecCccccCcCCCccCCCCcccccccccc
Q 008707 42 TKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLP-DMSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELHIENN 120 (557)
Q Consensus 42 ~~L~L~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~-~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~l~l~~N 120 (557)
+.|++++|+|+ .+|..+. ++|+.|+|++|+|++++| .|.++++|+.|+|++|+|++..|..|..+++|+.|++++|
T Consensus 12 ~~l~~s~n~l~-~ip~~~~--~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~N 88 (170)
T 3g39_A 12 TTVDCSGKSLA-SVPTGIP--TTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLNDN 88 (170)
T ss_dssp TEEECTTSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CEEEeCCCCcC-ccCccCC--CCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECCCC
Confidence 57888888888 6887663 788889999999988877 4888888999999999888555555678888999999999
Q ss_pred cCCCCCCccccc---CceeeeecCCCccccc
Q 008707 121 SFVGEIPPALLT---GKVIFKYDNNPKLHKE 148 (557)
Q Consensus 121 ~~~~~~p~~~~~---~~~~~~~~~n~~~~~~ 148 (557)
+|+ .+|+..+. .+..+.+++|++.|.+
T Consensus 89 ~l~-~~~~~~~~~l~~L~~L~L~~N~~~c~c 118 (170)
T 3g39_A 89 QLK-SIPRGAFDNLKSLTHIWLLNNPWDCAC 118 (170)
T ss_dssp CCC-CCCTTTTTTCTTCCEEECCSSCBCTTB
T ss_pred ccC-EeCHHHhcCCCCCCEEEeCCCCCCCCc
Confidence 888 67765443 4567788889888864
No 266
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.51 E-value=5.4e-14 Score=131.44 Aligned_cols=121 Identities=23% Similarity=0.354 Sum_probs=97.2
Q ss_pred CCCCCCCCeEEeeC--------CCCCceEEEEecCCCccccCCccccCCCCCcEEECcCCCCCCCCCC-ccCCCCCcEEE
Q 008707 22 PCVPVPWEWVTCST--------TTPPRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPD-MSRLIDLRIVH 92 (557)
Q Consensus 22 ~c~~~~~~~v~c~~--------~~p~~l~~L~L~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~-~~~l~~L~~L~ 92 (557)
.| .|.|++|.|+. ..+++++.|+|++|++++..+..|.++++|+.|+|++|+|++.++. |..+++|+.|+
T Consensus 4 ~C-~C~~~~v~c~~~~l~~~p~~~~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ 82 (208)
T 2o6s_A 4 RC-SCSGTTVECYSQGRTSVPTGIPAQTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSLPNGVFNKLTSLTYLN 82 (208)
T ss_dssp TC-EEETTEEECCSSCCSSCCSCCCTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred CC-EECCCEEEecCCCccCCCCCCCCCCcEEEcCCCccCcCChhhhcccccCcEEECCCCccCccChhhcCCCCCcCEEE
Confidence 45 57999999987 2367899999999999965556688999999999999999988775 78899999999
Q ss_pred ecCccccCcCCCccCCCCcccccccccccCCCCCCcccc---cCceeeeecCCCc
Q 008707 93 LENNELTGSLPSYMGSLPNLQELHIENNSFVGEIPPALL---TGKVIFKYDNNPK 144 (557)
Q Consensus 93 l~~N~l~~~~p~~~~~l~~L~~l~l~~N~~~~~~p~~~~---~~~~~~~~~~n~~ 144 (557)
|++|+|++..+..+..+++|+.|++++|++. .+|+..+ ..+..+.+.+|..
T Consensus 83 Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~-~~~~~~~~~l~~L~~L~l~~N~l 136 (208)
T 2o6s_A 83 LSTNQLQSLPNGVFDKLTQLKELALNTNQLQ-SLPDGVFDKLTQLKDLRLYQNQL 136 (208)
T ss_dssp CCSSCCCCCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCTTCCEEECCSSCC
T ss_pred CCCCcCCccCHhHhcCccCCCEEEcCCCcCc-ccCHhHhccCCcCCEEECCCCcc
Confidence 9999999555556788999999999999998 6666543 3455667777754
No 267
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.50 E-value=4.7e-14 Score=133.17 Aligned_cols=124 Identities=17% Similarity=0.165 Sum_probs=65.4
Q ss_pred CCCCCeEEeeCC--------CCCceEEEEecCCCccccCC-------------------------ccccCCCCCcEEECc
Q 008707 25 PVPWEWVTCSTT--------TPPRITKIALSGKNLKGEIP-------------------------PELKNMEALTELWLD 71 (557)
Q Consensus 25 ~~~~~~v~c~~~--------~p~~l~~L~L~~n~l~~~~p-------------------------~~~~~l~~L~~L~l~ 71 (557)
.|.|+.+.|+.. .|+.++.|+|++|+|++..| ..|.++++|+.|+|+
T Consensus 10 ~C~~~~l~~s~n~l~~iP~~~~~~~~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls 89 (220)
T 2v70_A 10 RCEGTTVDCSNQKLNKIPEHIPQYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLT 89 (220)
T ss_dssp EEETTEEECCSSCCSSCCSCCCTTCSEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECC
T ss_pred EECCCEeEeCCCCcccCccCCCCCCCEEEcCCCcCCccCchhhhccCCCCCEEECCCCcCCEECHHHhCCCCCCCEEECC
Confidence 467888888662 23345556666665554333 334444444444444
Q ss_pred CCCCCCCCCC-ccCCCCCcEEEecCccccCcCCCccCCCCcccccccccccCCCCCCcccc--cCceeeeecCCCccccc
Q 008707 72 GNFLTGPLPD-MSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELHIENNSFVGEIPPALL--TGKVIFKYDNNPKLHKE 148 (557)
Q Consensus 72 ~N~l~~~~~~-~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~l~l~~N~~~~~~p~~~~--~~~~~~~~~~n~~~~~~ 148 (557)
+|+|++.++. |..+++|+.|+|++|+|++..|..|..+++|+.|++++|+|++..|..+. ..+..+.+.+|++.|++
T Consensus 90 ~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c 169 (220)
T 2v70_A 90 SNRLENVQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLLSLYDNQITTVAPGAFDTLHSLSTLNLLANPFNCNC 169 (220)
T ss_dssp SSCCCCCCGGGGTTCSSCCEEECTTSCCCCBCTTSSTTCTTCSEEECTTSCCCCBCTTTTTTCTTCCEEECCSCCEECSG
T ss_pred CCccCccCHhHhcCCcCCCEEECCCCcCCeECHhHcCCCccCCEEECCCCcCCEECHHHhcCCCCCCEEEecCcCCcCCC
Confidence 4444444442 44555555555555555544455555555555555555555522233322 23445666777777653
No 268
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.47 E-value=1.3e-13 Score=124.46 Aligned_cols=101 Identities=23% Similarity=0.268 Sum_probs=90.6
Q ss_pred CCCCCeEEeeC--------CCCCceEEEEecCCCccccCCccccCCCCCcEEECcCCCCCCCCCC-ccCCCCCcEEEecC
Q 008707 25 PVPWEWVTCST--------TTPPRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPD-MSRLIDLRIVHLEN 95 (557)
Q Consensus 25 ~~~~~~v~c~~--------~~p~~l~~L~L~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~-~~~l~~L~~L~l~~ 95 (557)
.|.|+.+.|+. ..+++++.|+|++|+|++..|..|.++++|+.|+|++|+|+++++. |..+++|+.|+|++
T Consensus 8 ~C~~~~l~~s~n~l~~ip~~~~~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~ 87 (170)
T 3g39_A 8 SCSGTTVDCSGKSLASVPTGIPTTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLND 87 (170)
T ss_dssp EEETTEEECTTSCCSSCCSCCCTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CcCCCEEEeCCCCcCccCccCCCCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECCC
Confidence 57899999987 2367899999999999977788899999999999999999999885 89999999999999
Q ss_pred ccccCcCCCccCCCCcccccccccccCCCC
Q 008707 96 NELTGSLPSYMGSLPNLQELHIENNSFVGE 125 (557)
Q Consensus 96 N~l~~~~p~~~~~l~~L~~l~l~~N~~~~~ 125 (557)
|+|++..|..|..+++|+.|++++|.+...
T Consensus 88 N~l~~~~~~~~~~l~~L~~L~L~~N~~~c~ 117 (170)
T 3g39_A 88 NQLKSIPRGAFDNLKSLTHIWLLNNPWDCA 117 (170)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCBCTT
T ss_pred CccCEeCHHHhcCCCCCCEEEeCCCCCCCC
Confidence 999955556789999999999999999843
No 269
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=99.46 E-value=1.1e-14 Score=146.18 Aligned_cols=139 Identities=19% Similarity=0.238 Sum_probs=113.0
Q ss_pred HHHHHHhhhhc--C----CCCC----CCCCCCCCCCCeEEeeC-------CCCCceEEEEecCCCccccCCccccCCCCC
Q 008707 3 LEALRSISDES--E----RTND----RGDPCVPVPWEWVTCST-------TTPPRITKIALSGKNLKGEIPPELKNMEAL 65 (557)
Q Consensus 3 ~~~~~~~~~~~--~----~~~~----~~~~c~~~~~~~v~c~~-------~~p~~l~~L~L~~n~l~~~~p~~~~~l~~L 65 (557)
-.||.+++..+ + ..+| ++++ ..|.|.|++|.. ...++++.|+|++|+++ .+|..++++++|
T Consensus 29 ~~aLl~~k~~~~~~~~~~~~~w~~~~~~~~-~~~~~~g~~~~~~~~~l~~~~~~~l~~L~L~~n~l~-~lp~~l~~l~~L 106 (328)
T 4fcg_A 29 HDVLSQWQRHYNADRNRWHSAWRQANSNNP-QIETRTGRALKATADLLEDATQPGRVALELRSVPLP-QFPDQAFRLSHL 106 (328)
T ss_dssp HHHHHHHHHHHHHCCTTHHHHHHHHTTTCT-TSCCSHHHHHHHHHHHHHHHTSTTCCEEEEESSCCS-SCCSCGGGGTTC
T ss_pred HHHHHHHHHhccCCchhhhhhhcccccccc-cccccCCcchhhhHHHHhcccccceeEEEccCCCch-hcChhhhhCCCC
Confidence 46788888765 2 2457 2222 123699999963 23468999999999999 999999999999
Q ss_pred cEEECcCCCCCCCCCCccCCCCCcEEEecCccccCcCCCccCCCCcccccccccccCCCCCCccc-----------ccCc
Q 008707 66 TELWLDGNFLTGPLPDMSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELHIENNSFVGEIPPAL-----------LTGK 134 (557)
Q Consensus 66 ~~L~l~~N~l~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~l~l~~N~~~~~~p~~~-----------~~~~ 134 (557)
+.|+|++|.|+.++..|..+++|+.|+|++|+++ .+|..+..+++|+.|++++|++.+.+|..+ ...+
T Consensus 107 ~~L~L~~n~l~~lp~~~~~l~~L~~L~Ls~n~l~-~lp~~l~~l~~L~~L~L~~n~~~~~~p~~~~~~~~~~~~~~l~~L 185 (328)
T 4fcg_A 107 QHMTIDAAGLMELPDTMQQFAGLETLTLARNPLR-ALPASIASLNRLRELSIRACPELTELPEPLASTDASGEHQGLVNL 185 (328)
T ss_dssp SEEEEESSCCCCCCSCGGGGTTCSEEEEESCCCC-CCCGGGGGCTTCCEEEEEEETTCCCCCSCSEEEC-CCCEEESTTC
T ss_pred CEEECCCCCccchhHHHhccCCCCEEECCCCccc-cCcHHHhcCcCCCEEECCCCCCccccChhHhhccchhhhccCCCC
Confidence 9999999999955557999999999999999999 999999999999999999999888999877 3455
Q ss_pred eeeeecCCCc
Q 008707 135 VIFKYDNNPK 144 (557)
Q Consensus 135 ~~~~~~~n~~ 144 (557)
..+.+++|..
T Consensus 186 ~~L~L~~n~l 195 (328)
T 4fcg_A 186 QSLRLEWTGI 195 (328)
T ss_dssp CEEEEEEECC
T ss_pred CEEECcCCCc
Confidence 6666766653
No 270
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.45 E-value=2.1e-13 Score=123.61 Aligned_cols=103 Identities=22% Similarity=0.345 Sum_probs=88.3
Q ss_pred EEEEecCCCccccCCccccCCCCCcEEECcCCCCCCCCC-CccCCCCCcEEEecCccccCcCCCccCCCCcccccccccc
Q 008707 42 TKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLP-DMSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELHIENN 120 (557)
Q Consensus 42 ~~L~L~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~-~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~l~l~~N 120 (557)
+.|++++|+++ .+|..+. ++|+.|+|++|+|++.+| .|.++++|+.|+|++|+|++..+..|..+++|+.|+|++|
T Consensus 15 ~~l~~~~n~l~-~iP~~~~--~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N 91 (174)
T 2r9u_A 15 TLVNCQNIRLA-SVPAGIP--TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLNDN 91 (174)
T ss_dssp SEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred cEEEeCCCCCC-ccCCCcC--CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCCC
Confidence 68999999998 8898775 899999999999999988 5999999999999999999544445689999999999999
Q ss_pred cCCCCCCccccc---CceeeeecCCCccccc
Q 008707 121 SFVGEIPPALLT---GKVIFKYDNNPKLHKE 148 (557)
Q Consensus 121 ~~~~~~p~~~~~---~~~~~~~~~n~~~~~~ 148 (557)
+|. .+|+..+. .+..+.+.+|++.|..
T Consensus 92 ~l~-~l~~~~~~~l~~L~~L~L~~N~~~c~~ 121 (174)
T 2r9u_A 92 HLK-SIPRGAFDNLKSLTHIYLYNNPWDCEC 121 (174)
T ss_dssp CCC-CCCTTTTTTCTTCSEEECCSSCBCTTB
T ss_pred ccc-eeCHHHhccccCCCEEEeCCCCccccc
Confidence 999 78876443 5667889999999865
No 271
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.45 E-value=1.5e-13 Score=129.65 Aligned_cols=105 Identities=19% Similarity=0.294 Sum_probs=75.1
Q ss_pred eeCCCCCceEEEEecCCCccccCCccccCCCCCcEEECcCCCCCCCCC-C-ccCCCCCcEEEecCccccCcCCCccCCCC
Q 008707 33 CSTTTPPRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLP-D-MSRLIDLRIVHLENNELTGSLPSYMGSLP 110 (557)
Q Consensus 33 c~~~~p~~l~~L~L~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~-~-~~~l~~L~~L~l~~N~l~~~~p~~~~~l~ 110 (557)
|.|.. +.|++++|.++ .+|..+. ..++.|+|++|+|++.++ . |..+++|+.|+|++|+|++..|..|..++
T Consensus 9 C~C~~----~~l~~s~n~l~-~iP~~~~--~~~~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~ 81 (220)
T 2v70_A 9 CRCEG----TTVDCSNQKLN-KIPEHIP--QYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGAS 81 (220)
T ss_dssp CEEET----TEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCCEECTTTTTTCT
T ss_pred CEECC----CEeEeCCCCcc-cCccCCC--CCCCEEEcCCCcCCccCchhhhccCCCCCEEECCCCcCCEECHHHhCCCC
Confidence 66642 48999999999 7887664 456788888888888755 3 77788888888888888855555777788
Q ss_pred cccccccccccCCCCCCccccc---CceeeeecCCCcc
Q 008707 111 NLQELHIENNSFVGEIPPALLT---GKVIFKYDNNPKL 145 (557)
Q Consensus 111 ~L~~l~l~~N~~~~~~p~~~~~---~~~~~~~~~n~~~ 145 (557)
+|+.|++++|++. .+|...+. .+..+.+++|...
T Consensus 82 ~L~~L~Ls~N~l~-~~~~~~~~~l~~L~~L~Ls~N~l~ 118 (220)
T 2v70_A 82 GVNEILLTSNRLE-NVQHKMFKGLESLKTLMLRSNRIT 118 (220)
T ss_dssp TCCEEECCSSCCC-CCCGGGGTTCSSCCEEECTTSCCC
T ss_pred CCCEEECCCCccC-ccCHhHhcCCcCCCEEECCCCcCC
Confidence 8888888888887 55554332 3455566666543
No 272
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.45 E-value=2.7e-13 Score=122.89 Aligned_cols=104 Identities=18% Similarity=0.269 Sum_probs=90.2
Q ss_pred CCCCCeEEeeC--------CCCCceEEEEecCCCccccCCccccCCCCCcEEECcCCCCCCCCCC-ccCCCCCcEEEecC
Q 008707 25 PVPWEWVTCST--------TTPPRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPD-MSRLIDLRIVHLEN 95 (557)
Q Consensus 25 ~~~~~~v~c~~--------~~p~~l~~L~L~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~-~~~l~~L~~L~l~~ 95 (557)
.|...-+.|+. ..|++|+.|+|++|+|++..|..|.++++|+.|+|++|+|+++++. |.++++|+.|+|++
T Consensus 11 ~C~~~~l~~~~n~l~~iP~~~~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~ 90 (174)
T 2r9u_A 11 SCDQTLVNCQNIRLASVPAGIPTDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLND 90 (174)
T ss_dssp EECSSEEECCSSCCSSCCSCCCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred EECCcEEEeCCCCCCccCCCcCCCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCC
Confidence 45667788876 2467899999999999987888999999999999999999999885 78999999999999
Q ss_pred ccccCcCCCccCCCCcccccccccccCCCCCCcc
Q 008707 96 NELTGSLPSYMGSLPNLQELHIENNSFVGEIPPA 129 (557)
Q Consensus 96 N~l~~~~p~~~~~l~~L~~l~l~~N~~~~~~p~~ 129 (557)
|+|++..+..|..+++|+.|++++|.+. ..+..
T Consensus 91 N~l~~l~~~~~~~l~~L~~L~L~~N~~~-c~~~~ 123 (174)
T 2r9u_A 91 NHLKSIPRGAFDNLKSLTHIYLYNNPWD-CECRD 123 (174)
T ss_dssp SCCCCCCTTTTTTCTTCSEEECCSSCBC-TTBGG
T ss_pred CccceeCHHHhccccCCCEEEeCCCCcc-ccccc
Confidence 9999544445899999999999999998 55543
No 273
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=99.43 E-value=1.1e-13 Score=155.03 Aligned_cols=121 Identities=22% Similarity=0.320 Sum_probs=77.1
Q ss_pred HHHHHhhhhcC----CCCCC-CCCCCCCCCCeEEeeCCCCCceEEEEecCCCcccc---CCccccCCCCCcEEECcCCCC
Q 008707 4 EALRSISDESE----RTNDR-GDPCVPVPWEWVTCSTTTPPRITKIALSGKNLKGE---IPPELKNMEALTELWLDGNFL 75 (557)
Q Consensus 4 ~~~~~~~~~~~----~~~~~-~~~c~~~~~~~v~c~~~~p~~l~~L~L~~n~l~~~---~p~~~~~l~~L~~L~l~~N~l 75 (557)
.||.++|+.+. +++|+ ++.| |.|+||+|+ ..+++.|+|+++.+.|. +|+.+.+|+.|+.++++.|.+
T Consensus 15 ~all~~k~~~~~~~~l~~W~~~~~~--C~w~gv~C~---~~~v~~L~L~~~~l~g~~~~l~~~l~~L~~L~~l~~~~~~~ 89 (768)
T 3rgz_A 15 HQLISFKDVLPDKNLLPDWSSNKNP--CTFDGVTCR---DDKVTSIDLSSKPLNVGFSAVSSSLLSLTGLESLFLSNSHI 89 (768)
T ss_dssp HHHHHHHTTCSCTTSSTTCCTTSCG--GGSTTEEEE---TTEEEEEECTTSCCCEEHHHHHHHTTTCTTCCEEECTTSCE
T ss_pred HHHHHHHhhCCCcccccCCCCCCCC--cCCcceEEC---CCcEEEEECCCCCcCCccCccChhHhccCcccccCCcCCCc
Confidence 58999998873 56896 4444 369999998 26899999999999987 666555555555555555554
Q ss_pred CCCCCCccCCCCCcEEEecCccccCcCCC--ccCCCCcccccccccccCCCCCCcc
Q 008707 76 TGPLPDMSRLIDLRIVHLENNELTGSLPS--YMGSLPNLQELHIENNSFVGEIPPA 129 (557)
Q Consensus 76 ~~~~~~~~~l~~L~~L~l~~N~l~~~~p~--~~~~l~~L~~l~l~~N~~~~~~p~~ 129 (557)
...++.|+++++|++|+|++|.++|.+|. .++.+++|++|++++|.+.+.+|..
T Consensus 90 ~~l~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~ 145 (768)
T 3rgz_A 90 NGSVSGFKCSASLTSLDLSRNSLSGPVTTLTSLGSCSGLKFLNVSSNTLDFPGKVS 145 (768)
T ss_dssp EECCCCCCCCTTCCEEECCSSEEEEEGGGGGGGGGCTTCCEEECCSSEEECCSSCC
T ss_pred CCCchhhccCCCCCEEECCCCcCCCcCCChHHHhCCCCCCEEECcCCccCCcCCHH
Confidence 43333455555555555555555555554 5555555555555555555444443
No 274
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.43 E-value=3.7e-13 Score=132.64 Aligned_cols=108 Identities=30% Similarity=0.407 Sum_probs=75.6
Q ss_pred CceEEEEecCCCccccCCccccCCCCCcEEECcCCCCCCCCCC-ccCCCCCcEEEecCccccCcCCC-ccCCCCcccccc
Q 008707 39 PRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPD-MSRLIDLRIVHLENNELTGSLPS-YMGSLPNLQELH 116 (557)
Q Consensus 39 ~~l~~L~L~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~-~~~l~~L~~L~l~~N~l~~~~p~-~~~~l~~L~~l~ 116 (557)
++|+.|+|++|+|++..|..|.++++|+.|+|++|+|++.++. |..+++|+.|+|++|+|+ .+|. .+..+++|+.|+
T Consensus 100 ~~L~~L~l~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~-~l~~~~~~~l~~L~~L~ 178 (290)
T 1p9a_G 100 PALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNNLT-ELPAGLLNGLENLDTLL 178 (290)
T ss_dssp TTCCEEECCSSCCCCCCSSTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCS-CCCTTTTTTCTTCCEEE
T ss_pred CCCCEEECCCCcCcccCHHHHcCCCCCCEEECCCCCCCccChhhcccccCCCEEECCCCcCC-ccCHHHhcCcCCCCEEE
Confidence 4667777777777744445677777777777777777776664 667777777777777777 4443 456677777777
Q ss_pred cccccCCCCCCcccccC--ceeeeecCCCccccc
Q 008707 117 IENNSFVGEIPPALLTG--KVIFKYDNNPKLHKE 148 (557)
Q Consensus 117 l~~N~~~~~~p~~~~~~--~~~~~~~~n~~~~~~ 148 (557)
+++|+++ .+|..++.. +..+.+.+||+.|++
T Consensus 179 L~~N~l~-~ip~~~~~~~~L~~l~L~~Np~~C~c 211 (290)
T 1p9a_G 179 LQENSLY-TIPKGFFGSHLLPFAFLHGNPWLCNC 211 (290)
T ss_dssp CCSSCCC-CCCTTTTTTCCCSEEECCSCCBCCSG
T ss_pred CCCCcCC-ccChhhcccccCCeEEeCCCCccCcC
Confidence 7777777 777776653 456778899998875
No 275
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.38 E-value=4.5e-13 Score=135.56 Aligned_cols=102 Identities=21% Similarity=0.246 Sum_probs=89.3
Q ss_pred EEecCC-CccccCCccccCCCCCcEEECcC-CCCCCCCC-CccCCCCCcEEEecCccccCcCCCccCCCCcccccccccc
Q 008707 44 IALSGK-NLKGEIPPELKNMEALTELWLDG-NFLTGPLP-DMSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELHIENN 120 (557)
Q Consensus 44 L~L~~n-~l~~~~p~~~~~l~~L~~L~l~~-N~l~~~~~-~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~l~l~~N 120 (557)
++++++ +|+ .+|. |..+++|+.|+|++ |+|+++++ .|.+|++|+.|+|++|+|++..|..|.+|++|+.|+|++|
T Consensus 13 v~~~~~n~l~-~ip~-l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N 90 (347)
T 2ifg_A 13 LRCTRDGALD-SLHH-LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLSFN 90 (347)
T ss_dssp EECCSSCCCT-TTTT-SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECCSS
T ss_pred EEcCCCCCCC-ccCC-CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHHHhcCCcCCCEEeCCCC
Confidence 455666 788 6888 99999999999996 99999987 5999999999999999999888888999999999999999
Q ss_pred cCCCCCCcccccC--ceeeeecCCCccccc
Q 008707 121 SFVGEIPPALLTG--KVIFKYDNNPKLHKE 148 (557)
Q Consensus 121 ~~~~~~p~~~~~~--~~~~~~~~n~~~~~~ 148 (557)
+|+ .+|+.++.. +..+.+.+|++.|++
T Consensus 91 ~l~-~~~~~~~~~~~L~~l~l~~N~~~c~c 119 (347)
T 2ifg_A 91 ALE-SLSWKTVQGLSLQELVLSGNPLHCSC 119 (347)
T ss_dssp CCS-CCCSTTTCSCCCCEEECCSSCCCCCG
T ss_pred ccc-eeCHHHcccCCceEEEeeCCCccCCC
Confidence 999 788877654 567788999999875
No 276
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.38 E-value=1.5e-12 Score=125.50 Aligned_cols=117 Identities=22% Similarity=0.274 Sum_probs=95.8
Q ss_pred CCCeEEeeC--------CCCCceEEEEecCCCccccCCccccCCCCCcEEECcCCCCCCCCCC-ccCCCCCcEEEecCcc
Q 008707 27 PWEWVTCST--------TTPPRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPD-MSRLIDLRIVHLENNE 97 (557)
Q Consensus 27 ~~~~v~c~~--------~~p~~l~~L~L~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~-~~~l~~L~~L~l~~N~ 97 (557)
.|+.|.|+. ..|++++.|+|++|++++..|..|.++++|+.|+|++|+|++.++. |..+++|+.|+|++|+
T Consensus 15 ~~~~l~~~~~~l~~~p~~~~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~ 94 (251)
T 3m19_A 15 GKKEVDCQGKSLDSVPSGIPADTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLANNQ 94 (251)
T ss_dssp GGTEEECTTCCCSSCCSCCCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSC
T ss_pred CCeEEecCCCCccccCCCCCCCCCEEEccCCCcCccCHhHhcCcccCCEEECCCCcCCccCHhHhccCCcCCEEECCCCc
Confidence 345677765 3467899999999999977777899999999999999999998884 8999999999999999
Q ss_pred ccCcCCCccCCCCcccccccccccCCCCCCcccc---cCceeeeecCCCc
Q 008707 98 LTGSLPSYMGSLPNLQELHIENNSFVGEIPPALL---TGKVIFKYDNNPK 144 (557)
Q Consensus 98 l~~~~p~~~~~l~~L~~l~l~~N~~~~~~p~~~~---~~~~~~~~~~n~~ 144 (557)
|++..|..|..+++|+.|++++|+|+ .+|...+ ..+..+.+++|..
T Consensus 95 l~~~~~~~~~~l~~L~~L~L~~N~l~-~~~~~~~~~l~~L~~L~Ls~N~l 143 (251)
T 3m19_A 95 LASLPLGVFDHLTQLDKLYLGGNQLK-SLPSGVFDRLTKLKELRLNTNQL 143 (251)
T ss_dssp CCCCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCTTCCEEECCSSCC
T ss_pred ccccChhHhcccCCCCEEEcCCCcCC-CcChhHhccCCcccEEECcCCcC
Confidence 99666667888999999999999998 7777654 3456667777753
No 277
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.37 E-value=1.6e-12 Score=125.25 Aligned_cols=108 Identities=20% Similarity=0.276 Sum_probs=70.5
Q ss_pred CceEEEEecCCCccccCCccccCCCCCcEEECcCCCCCCCCCC-ccCCCCCcEEEecCccccCcCCCccCCCCccccccc
Q 008707 39 PRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPD-MSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELHI 117 (557)
Q Consensus 39 ~~l~~L~L~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~-~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~l~l 117 (557)
++|+.|+|++|+|++..+..|..+++|+.|+|++|+|++.++. |..+++|+.|+|++|+|++..|..|..+++|+.|++
T Consensus 83 ~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L 162 (251)
T 3m19_A 83 TELGTLGLANNQLASLPLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELRLNTNQLQSIPAGAFDKLTNLQTLSL 162 (251)
T ss_dssp TTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CcCCEEECCCCcccccChhHhcccCCCCEEEcCCCcCCCcChhHhccCCcccEEECcCCcCCccCHHHcCcCcCCCEEEC
Confidence 4566666666666644445566667777777777777766664 566777777777777777444445667777777777
Q ss_pred ccccCCCCCCcccc---cCceeeeecCCCcccc
Q 008707 118 ENNSFVGEIPPALL---TGKVIFKYDNNPKLHK 147 (557)
Q Consensus 118 ~~N~~~~~~p~~~~---~~~~~~~~~~n~~~~~ 147 (557)
++|++. .+|+..+ ..+..+.+.+|++.|.
T Consensus 163 ~~N~l~-~~~~~~~~~l~~L~~L~l~~N~~~c~ 194 (251)
T 3m19_A 163 STNQLQ-SVPHGAFDRLGKLQTITLFGNQFDCS 194 (251)
T ss_dssp CSSCCS-CCCTTTTTTCTTCCEEECCSCCBCTT
T ss_pred CCCcCC-ccCHHHHhCCCCCCEEEeeCCceeCC
Confidence 777777 4554333 2445667777777765
No 278
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.37 E-value=1.2e-12 Score=127.62 Aligned_cols=127 Identities=22% Similarity=0.340 Sum_probs=96.3
Q ss_pred CCCCCCCCC-CCCCeEEeeC--------CCCCceEEEEecCCCccccCCccccCCCCCcEEECcCCCCCCCCCC-ccCCC
Q 008707 17 NDRGDPCVP-VPWEWVTCST--------TTPPRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPD-MSRLI 86 (557)
Q Consensus 17 ~~~~~~c~~-~~~~~v~c~~--------~~p~~l~~L~L~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~-~~~l~ 86 (557)
.|.|..|.. ..|+.|.|+. ..|++++.|+|++|++++..+..|.++++|+.|+|++|+|+.+++. |..++
T Consensus 6 ~~~~~~C~c~~~~~~l~~~~~~l~~ip~~~~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~i~~~~~~~l~ 85 (270)
T 2o6q_A 6 KKDGGVCSCNNNKNSVDCSSKKLTAIPSNIPADTKKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQTLPAGIFKELK 85 (270)
T ss_dssp GGGTCSBEEETTTTEEECTTSCCSSCCSCCCTTCSEEECCSSCCSCCCTTSSSSCTTCCEEECCSSCCSCCCTTTTSSCT
T ss_pred CCCCCCCEeCCCCCEEEccCCCCCccCCCCCCCCCEEECcCCCCCeeCHHHhcCCCCCCEEECCCCccCeeChhhhcCCC
Confidence 355555532 1355666655 2356789999999999955556889999999999999999988775 78899
Q ss_pred CCcEEEecCccccCcCCCccCCCCcccccccccccCCCCCCcccc---cCceeeeecCCCc
Q 008707 87 DLRIVHLENNELTGSLPSYMGSLPNLQELHIENNSFVGEIPPALL---TGKVIFKYDNNPK 144 (557)
Q Consensus 87 ~L~~L~l~~N~l~~~~p~~~~~l~~L~~l~l~~N~~~~~~p~~~~---~~~~~~~~~~n~~ 144 (557)
+|+.|+|++|++++..+..+..+++|+.|++++|++. .+|...+ ..+..+.+++|..
T Consensus 86 ~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~-~~~~~~~~~l~~L~~L~Ls~n~l 145 (270)
T 2o6q_A 86 NLETLWVTDNKLQALPIGVFDQLVNLAELRLDRNQLK-SLPPRVFDSLTKLTYLSLGYNEL 145 (270)
T ss_dssp TCCEEECCSSCCCCCCTTTTTTCSSCCEEECCSSCCC-CCCTTTTTTCTTCCEEECCSSCC
T ss_pred CCCEEECCCCcCCcCCHhHcccccCCCEEECCCCccC-eeCHHHhCcCcCCCEEECCCCcC
Confidence 9999999999999555556788999999999999998 6665543 3456677777753
No 279
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.36 E-value=2.6e-12 Score=119.87 Aligned_cols=110 Identities=21% Similarity=0.274 Sum_probs=94.9
Q ss_pred CCceEEEEecCCCccccCCccccCCCCCcEEECcCCCCCCCCCC-ccCCCCCcEEEecCccccCcCCCccCCCCcccccc
Q 008707 38 PPRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPD-MSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELH 116 (557)
Q Consensus 38 p~~l~~L~L~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~-~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~l~ 116 (557)
.++|+.|+|++|++++..+..|.++++|++|+|++|+|++.++. |..+++|+.|+|++|+|++..+..+..+++|+.|+
T Consensus 51 l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ 130 (208)
T 2o6s_A 51 LTSLTQLYLGGNKLQSLPNGVFNKLTSLTYLNLSTNQLQSLPNGVFDKLTQLKELALNTNQLQSLPDGVFDKLTQLKDLR 130 (208)
T ss_dssp CTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred cccCcEEECCCCccCccChhhcCCCCCcCEEECCCCcCCccCHhHhcCccCCCEEEcCCCcCcccCHhHhccCCcCCEEE
Confidence 46899999999999955555678999999999999999998885 89999999999999999965566688999999999
Q ss_pred cccccCCCCCCcccc---cCceeeeecCCCccccc
Q 008707 117 IENNSFVGEIPPALL---TGKVIFKYDNNPKLHKE 148 (557)
Q Consensus 117 l~~N~~~~~~p~~~~---~~~~~~~~~~n~~~~~~ 148 (557)
+++|+++ .+|...+ ..+..+.+.+|++.|..
T Consensus 131 l~~N~l~-~~~~~~~~~l~~L~~L~l~~N~~~~~~ 164 (208)
T 2o6s_A 131 LYQNQLK-SVPDGVFDRLTSLQYIWLHDNPWDCTC 164 (208)
T ss_dssp CCSSCCS-CCCTTTTTTCTTCCEEECCSCCBCCCT
T ss_pred CCCCccc-eeCHHHhccCCCccEEEecCCCeecCC
Confidence 9999999 6777644 35677889999988754
No 280
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.36 E-value=1.3e-12 Score=133.04 Aligned_cols=121 Identities=20% Similarity=0.171 Sum_probs=95.5
Q ss_pred CCCCCCeEEeeC--------CCCCceEEEEecCCCccccCCcccc-CCCCCcEEECcCCCCCCCCC-CccCCCCCcEEEe
Q 008707 24 VPVPWEWVTCST--------TTPPRITKIALSGKNLKGEIPPELK-NMEALTELWLDGNFLTGPLP-DMSRLIDLRIVHL 93 (557)
Q Consensus 24 ~~~~~~~v~c~~--------~~p~~l~~L~L~~n~l~~~~p~~~~-~l~~L~~L~l~~N~l~~~~~-~~~~l~~L~~L~l 93 (557)
|.|.+..|.|+. ..|+.++.|+|++|+|++..+..+. ++++|+.|+|++|+|+++++ .|.++++|+.|+|
T Consensus 16 C~C~~~~l~c~~~~l~~iP~~~~~~l~~L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~L 95 (361)
T 2xot_A 16 CLCASNILSCSKQQLPNVPQSLPSYTALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNFISSEAFVPVPNLRYLDL 95 (361)
T ss_dssp CEEETTEEECCSSCCSSCCSSCCTTCSEEECCSSCCCEECTTSSSSCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEEC
T ss_pred CEECCCEEEeCCCCcCccCccCCCCCCEEECCCCCCCccChhhhhhcccccCEEECCCCcCCccChhhccCCCCCCEEEC
Confidence 456778889977 3466789999999999966666676 89999999999999999887 4899999999999
Q ss_pred cCccccCcCCCccCCCCcccccccccccCCCCCCccccc---CceeeeecCCCcc
Q 008707 94 ENNELTGSLPSYMGSLPNLQELHIENNSFVGEIPPALLT---GKVIFKYDNNPKL 145 (557)
Q Consensus 94 ~~N~l~~~~p~~~~~l~~L~~l~l~~N~~~~~~p~~~~~---~~~~~~~~~n~~~ 145 (557)
++|+|++..+..|..+++|+.|+|++|+|. .+++..+. .+..+.+++|...
T Consensus 96 s~N~l~~~~~~~~~~l~~L~~L~L~~N~i~-~~~~~~~~~l~~L~~L~L~~N~l~ 149 (361)
T 2xot_A 96 SSNHLHTLDEFLFSDLQALEVLLLYNNHIV-VVDRNAFEDMAQLQKLYLSQNQIS 149 (361)
T ss_dssp CSSCCCEECTTTTTTCTTCCEEECCSSCCC-EECTTTTTTCTTCCEEECCSSCCC
T ss_pred CCCcCCcCCHHHhCCCcCCCEEECCCCccc-EECHHHhCCcccCCEEECCCCcCC
Confidence 999999555567888999999999999988 55444333 4556677777543
No 281
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=99.35 E-value=3.2e-13 Score=134.68 Aligned_cols=108 Identities=26% Similarity=0.309 Sum_probs=92.0
Q ss_pred eEEEEecCCCccccCCccccCCCCCcEEECcCCCCCCCCCCccCCCCCcEEEecCccccCcCCCccCCCCcccccccccc
Q 008707 41 ITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPDMSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELHIENN 120 (557)
Q Consensus 41 l~~L~L~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~l~l~~N 120 (557)
|+.|+|++|.+++.+|..+..+++|+.|+|++|++++.+|.+..+++|+.|+|++|+|++.+|..+..+++|+.|++++|
T Consensus 199 L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N 278 (313)
T 1ogq_A 199 LAFVDLSRNMLEGDASVLFGSDKNTQKIHLAKNSLAFDLGKVGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFN 278 (313)
T ss_dssp CSEEECCSSEEEECCGGGCCTTSCCSEEECCSSEECCBGGGCCCCTTCCEEECCSSCCEECCCGGGGGCTTCCEEECCSS
T ss_pred ccEEECcCCcccCcCCHHHhcCCCCCEEECCCCceeeecCcccccCCCCEEECcCCcccCcCChHHhcCcCCCEEECcCC
Confidence 77788888888877777888888899999999999888888888899999999999999899999999999999999999
Q ss_pred cCCCCCCccc-ccCceeeeecCCCccccc
Q 008707 121 SFVGEIPPAL-LTGKVIFKYDNNPKLHKE 148 (557)
Q Consensus 121 ~~~~~~p~~~-~~~~~~~~~~~n~~~~~~ 148 (557)
+++|.+|... +..+..+.+.+|+++|+.
T Consensus 279 ~l~~~ip~~~~l~~L~~l~l~~N~~lc~~ 307 (313)
T 1ogq_A 279 NLCGEIPQGGNLQRFDVSAYANNKCLCGS 307 (313)
T ss_dssp EEEEECCCSTTGGGSCGGGTCSSSEEEST
T ss_pred cccccCCCCccccccChHHhcCCCCccCC
Confidence 9998888752 334567789999999874
No 282
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=99.35 E-value=1.1e-12 Score=143.36 Aligned_cols=108 Identities=15% Similarity=0.057 Sum_probs=93.1
Q ss_pred CCCCceEEEEecCCCccccCCccccCCCCCcEEECcCCCCCCCCC-CccCCCCCcEEEecCccccCcCCCccCCCCcccc
Q 008707 36 TTPPRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLP-DMSRLIDLRIVHLENNELTGSLPSYMGSLPNLQE 114 (557)
Q Consensus 36 ~~p~~l~~L~L~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~-~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~ 114 (557)
+.|++++.|||++|+|++..|..|.+|++|++|+|++|+|+++++ .|.++++|++|+|++|+|++..|..|.++++|+.
T Consensus 49 ~lp~~~~~LdLs~N~i~~l~~~~f~~l~~L~~L~Ls~N~i~~i~~~~f~~L~~L~~L~Ls~N~l~~l~~~~f~~L~~L~~ 128 (635)
T 4g8a_A 49 NLPFSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQK 128 (635)
T ss_dssp SSCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECGGGGTTCTTCCE
T ss_pred CCCcCCCEEEeeCCCCCCCCHHHHhCCCCCCEEECCCCcCCCcChhHhcCCCCCCEEEccCCcCCCCCHHHhcCCCCCCE
Confidence 357789999999999996666789999999999999999999988 5999999999999999999555567899999999
Q ss_pred cccccccCCCCCCccccc---CceeeeecCCCc
Q 008707 115 LHIENNSFVGEIPPALLT---GKVIFKYDNNPK 144 (557)
Q Consensus 115 l~l~~N~~~~~~p~~~~~---~~~~~~~~~n~~ 144 (557)
|++++|+++ .+|+..+. .+..+.+.+|..
T Consensus 129 L~Ls~N~l~-~l~~~~~~~L~~L~~L~Ls~N~l 160 (635)
T 4g8a_A 129 LVAVETNLA-SLENFPIGHLKTLKELNVAHNLI 160 (635)
T ss_dssp EECTTSCCC-CSTTCCCTTCTTCCEEECCSSCC
T ss_pred EECCCCcCC-CCChhhhhcCcccCeeccccCcc
Confidence 999999999 78776543 456677777754
No 283
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.34 E-value=3.4e-13 Score=142.90 Aligned_cols=29 Identities=10% Similarity=0.015 Sum_probs=25.0
Q ss_pred HHHHHHHHHHHhhcCCCCccceeeEEEec
Q 008707 275 TQQFVTEVALLSRIHHRNLVPLIGYCEEE 303 (557)
Q Consensus 275 ~~~~~~E~~il~~l~h~nIv~~~~~~~~~ 303 (557)
.++|..|++.+.+++|+|+|+++|||...
T Consensus 323 ~~eF~~Eve~L~~i~HrNLV~L~gyC~s~ 351 (487)
T 3oja_A 323 SETERLECERENQARQREIDALKEQYRTV 351 (487)
T ss_dssp --CHHHHHHHHHHHHHHHHHHHHHHTCCC
T ss_pred HHHHHHHHHHHhcccccchhhHHHHhcCh
Confidence 46799999999999999999999998764
No 284
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.34 E-value=3.4e-12 Score=124.33 Aligned_cols=109 Identities=22% Similarity=0.292 Sum_probs=82.9
Q ss_pred CceEEEEecCCCccccCCccccCCCCCcEEECcCCCCCCCCCC-ccCCCCCcEEEecCccccCcCCCccCCCCccccccc
Q 008707 39 PRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPD-MSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELHI 117 (557)
Q Consensus 39 ~~l~~L~L~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~-~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~l~l 117 (557)
++|+.|+|++|.+++..|..|.++++|+.|+|++|+|++.++. |..+++|+.|+|++|++++..|..|..+++|+.|++
T Consensus 109 ~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 188 (270)
T 2o6q_A 109 VNLAELRLDRNQLKSLPPRVFDSLTKLTYLSLGYNELQSLPKGVFDKLTSLKELRLYNNQLKRVPEGAFDKLTELKTLKL 188 (270)
T ss_dssp SSCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEEC
T ss_pred cCCCEEECCCCccCeeCHHHhCcCcCCCEEECCCCcCCccCHhHccCCcccceeEecCCcCcEeChhHhccCCCcCEEEC
Confidence 5677777777777755556677788888888888888877764 778888888888888888554556778888888888
Q ss_pred ccccCCCCCCccccc---CceeeeecCCCccccc
Q 008707 118 ENNSFVGEIPPALLT---GKVIFKYDNNPKLHKE 148 (557)
Q Consensus 118 ~~N~~~~~~p~~~~~---~~~~~~~~~n~~~~~~ 148 (557)
++|+++ .+|...+. .+..+.+.+||+.|++
T Consensus 189 ~~N~l~-~~~~~~~~~l~~L~~L~l~~N~~~c~c 221 (270)
T 2o6q_A 189 DNNQLK-RVPEGAFDSLEKLKMLQLQENPWDCTC 221 (270)
T ss_dssp CSSCCS-CCCTTTTTTCTTCCEEECCSSCBCCSS
T ss_pred CCCcCC-cCCHHHhccccCCCEEEecCCCeeCCC
Confidence 888888 67765443 4567788999988875
No 285
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.34 E-value=1.3e-12 Score=120.53 Aligned_cols=91 Identities=22% Similarity=0.341 Sum_probs=85.1
Q ss_pred CCceEEEEecCCCccccCCccccCCCCCcEEECcCCCCCCCCCC-ccCCCCCcEEEecCccccCcCCCccCCCCcccccc
Q 008707 38 PPRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPD-MSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELH 116 (557)
Q Consensus 38 p~~l~~L~L~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~-~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~l~ 116 (557)
.++|+.|+|++|.|++..|..|.++++|+.|+|++|+|++.++. |.++++|+.|+|++|+|++..|..+..+++|+.|+
T Consensus 53 l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ 132 (192)
T 1w8a_A 53 LPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGENKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLN 132 (192)
T ss_dssp CTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSCCCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEE
T ss_pred CCCCCEEECCCCCCCCcCHhHcCCcccCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCCeeCHHHhhcCCCCCEEE
Confidence 46899999999999988899999999999999999999999985 99999999999999999988899999999999999
Q ss_pred cccccCCCCCCc
Q 008707 117 IENNSFVGEIPP 128 (557)
Q Consensus 117 l~~N~~~~~~p~ 128 (557)
+++|.+.+..+-
T Consensus 133 L~~N~l~c~c~l 144 (192)
T 1w8a_A 133 LASNPFNCNCHL 144 (192)
T ss_dssp CTTCCBCCSGGG
T ss_pred eCCCCccCcCcc
Confidence 999999976654
No 286
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.32 E-value=3.5e-12 Score=120.21 Aligned_cols=110 Identities=20% Similarity=0.286 Sum_probs=99.3
Q ss_pred CCceEEEEecCCCccccCCccccCCCCCcEEECcCCCCCCCCCC-ccCCCCCcEEEecCccccCcCCCccCCCCcccccc
Q 008707 38 PPRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPD-MSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELH 116 (557)
Q Consensus 38 p~~l~~L~L~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~-~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~l~ 116 (557)
.++|+.|+|++|.|++..|..|.++++|+.|+|++|+|+.+++. |..+++|+.|+|++|+|++..|..|..+++|+.|+
T Consensus 55 l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ 134 (220)
T 2v9t_B 55 YKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGNKITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLS 134 (220)
T ss_dssp CTTCCEEECCSSCCCEECTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred CCCCCEEECCCCcCCCcCHHHhhCCcCCCEEECCCCcCCccCHhHccCCCCCCEEECCCCCCCEeCHHHcCCCCCCCEEE
Confidence 36899999999999988899999999999999999999998885 89999999999999999987788999999999999
Q ss_pred cccccCCCCCCccccc---CceeeeecCCCccccc
Q 008707 117 IENNSFVGEIPPALLT---GKVIFKYDNNPKLHKE 148 (557)
Q Consensus 117 l~~N~~~~~~p~~~~~---~~~~~~~~~n~~~~~~ 148 (557)
+++|+|+ .+|...+. .+..+.+.+|++.|++
T Consensus 135 L~~N~l~-~~~~~~~~~l~~L~~L~L~~N~~~c~c 168 (220)
T 2v9t_B 135 LYDNKLQ-TIAKGTFSPLRAIQTMHLAQNPFICDC 168 (220)
T ss_dssp CCSSCCS-CCCTTTTTTCTTCCEEECCSSCEECSG
T ss_pred CCCCcCC-EECHHHHhCCCCCCEEEeCCCCcCCCC
Confidence 9999999 67765443 4567899999999975
No 287
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.32 E-value=1.6e-12 Score=132.31 Aligned_cols=93 Identities=22% Similarity=0.200 Sum_probs=69.6
Q ss_pred CCceEEEEecCCCccccCCccccCCCCCcEEECcCCCCCCCCC-CccCCCCCcEEEecCccccCcCCCccCCCCcccccc
Q 008707 38 PPRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLP-DMSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELH 116 (557)
Q Consensus 38 p~~l~~L~L~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~-~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~l~ 116 (557)
.++|+.|+|++|+|++..|..|.++++|+.|+|++|+|+++++ .|.++++|+.|+|++|+|++..|..|..+++|+.|+
T Consensus 63 l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~ 142 (361)
T 2xot_A 63 LTNLHSLLLSHNHLNFISSEAFVPVPNLRYLDLSSNHLHTLDEFLFSDLQALEVLLLYNNHIVVVDRNAFEDMAQLQKLY 142 (361)
T ss_dssp CTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEE
T ss_pred ccccCEEECCCCcCCccChhhccCCCCCCEEECCCCcCCcCCHHHhCCCcCCCEEECCCCcccEECHHHhCCcccCCEEE
Confidence 3567888888888886555667778888888888888877776 377788888888888887766667777777777777
Q ss_pred cccccCCCCCCcccc
Q 008707 117 IENNSFVGEIPPALL 131 (557)
Q Consensus 117 l~~N~~~~~~p~~~~ 131 (557)
|++|+|. .+|..++
T Consensus 143 L~~N~l~-~l~~~~~ 156 (361)
T 2xot_A 143 LSQNQIS-RFPVELI 156 (361)
T ss_dssp CCSSCCC-SCCGGGT
T ss_pred CCCCcCC-eeCHHHh
Confidence 7777777 6766553
No 288
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=99.32 E-value=2.2e-12 Score=141.08 Aligned_cols=111 Identities=16% Similarity=0.178 Sum_probs=97.5
Q ss_pred CCceEEEEecCCCcc-ccCCccccCCCCCcEEECcCCCCCCCCC-CccCCCCCcEEEecCccccCcCCCccCCCCccccc
Q 008707 38 PPRITKIALSGKNLK-GEIPPELKNMEALTELWLDGNFLTGPLP-DMSRLIDLRIVHLENNELTGSLPSYMGSLPNLQEL 115 (557)
Q Consensus 38 p~~l~~L~L~~n~l~-~~~p~~~~~l~~L~~L~l~~N~l~~~~~-~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~l 115 (557)
.+.++.|+|++|.+. +.+|..|..+++|+.|+|++|+|++++| .|.++++|+.|+|++|+|++..|..|..+++|+.|
T Consensus 468 ~~~L~~L~Ls~N~~~~~~~~~~~~~l~~L~~L~Ls~N~L~~l~~~~f~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L 547 (635)
T 4g8a_A 468 LSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVL 547 (635)
T ss_dssp CTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCBCCCGGGTTCTTCCEE
T ss_pred chhhhhhhhhhcccccccCchhhhhccccCEEECCCCccCCcChHHHcCCCCCCEEECCCCcCCCCChhHHhCCCCCCEE
Confidence 578999999999854 4578889999999999999999999988 59999999999999999997777789999999999
Q ss_pred ccccccCCCCCCcccc---cCceeeeecCCCccccc
Q 008707 116 HIENNSFVGEIPPALL---TGKVIFKYDNNPKLHKE 148 (557)
Q Consensus 116 ~l~~N~~~~~~p~~~~---~~~~~~~~~~n~~~~~~ 148 (557)
++++|+|++..|..+. ..+..+.+++||+.|++
T Consensus 548 ~Ls~N~l~~~~~~~l~~l~~~L~~L~L~~Np~~C~C 583 (635)
T 4g8a_A 548 DYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFACTC 583 (635)
T ss_dssp ECTTSCCCBCCSSCTTCCCTTCCEEECTTCCBCCSG
T ss_pred ECCCCcCCCCCHHHHHhhhCcCCEEEeeCCCCcccC
Confidence 9999999955555543 35677899999999986
No 289
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.31 E-value=6.5e-12 Score=122.46 Aligned_cols=108 Identities=19% Similarity=0.253 Sum_probs=58.8
Q ss_pred CceEEEEecCCCccccCCccccCCCCCcEEECcCCCCCCCCCC-ccCCCCCcEEEecCccccCcCCCccCCCCccccccc
Q 008707 39 PRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPD-MSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELHI 117 (557)
Q Consensus 39 ~~l~~L~L~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~-~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~l~l 117 (557)
++|+.|+|++|++++..|..|.++++|+.|+|++|+|++.++. |..+++|+.|+|++|++++..|..+..+++|+.|++
T Consensus 109 ~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L 188 (272)
T 3rfs_A 109 TNLKELVLVENQLQSLPDGVFDKLTNLTYLNLAHNQLQSLPKGVFDKLTNLTELDLSYNQLQSLPEGVFDKLTQLKDLRL 188 (272)
T ss_dssp TTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred cCCCEEECCCCcCCccCHHHhccCCCCCEEECCCCccCccCHHHhccCccCCEEECCCCCcCccCHHHhcCCccCCEEEC
Confidence 4455555555555544444455555555555555555555553 455556666666666665444444555566666666
Q ss_pred ccccCCCCCCcccc---cCceeeeecCCCcccc
Q 008707 118 ENNSFVGEIPPALL---TGKVIFKYDNNPKLHK 147 (557)
Q Consensus 118 ~~N~~~~~~p~~~~---~~~~~~~~~~n~~~~~ 147 (557)
++|++. .+|+..+ ..+..+.+.+|++.|.
T Consensus 189 ~~N~l~-~~~~~~~~~l~~L~~L~l~~N~~~~~ 220 (272)
T 3rfs_A 189 YQNQLK-SVPDGVFDRLTSLQYIWLHDNPWDCT 220 (272)
T ss_dssp CSSCCS-CCCTTTTTTCTTCCEEECCSSCBCCC
T ss_pred CCCcCC-ccCHHHHhCCcCCCEEEccCCCcccc
Confidence 666665 3333322 2345556666666654
No 290
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.30 E-value=1.9e-12 Score=116.51 Aligned_cols=107 Identities=22% Similarity=0.269 Sum_probs=89.9
Q ss_pred CCCCceEEEEecCCCcc-ccCCccccCCCCCcEEECcCCCCCCCCCCccCCCCCcEEEecCccccCcCCCccCCCCcccc
Q 008707 36 TTPPRITKIALSGKNLK-GEIPPELKNMEALTELWLDGNFLTGPLPDMSRLIDLRIVHLENNELTGSLPSYMGSLPNLQE 114 (557)
Q Consensus 36 ~~p~~l~~L~L~~n~l~-~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~ 114 (557)
..|++|+.|+|++|+++ +.+|..+..+++|+.|+|++|.|++. +.|..+++|+.|+|++|++++.+|..+..+++|+.
T Consensus 21 ~~~~~L~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~~~-~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~ 99 (168)
T 2ell_A 21 RTPAAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISV-SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTH 99 (168)
T ss_dssp SCTTSCSEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCCCC-SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCCE
T ss_pred CCcccCCEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCCCh-hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCCE
Confidence 45688999999999998 78898889999999999999999988 77999999999999999999768877778999999
Q ss_pred cccccccCCCCCC--cccc--cCceeeeecCCCc
Q 008707 115 LHIENNSFVGEIP--PALL--TGKVIFKYDNNPK 144 (557)
Q Consensus 115 l~l~~N~~~~~~p--~~~~--~~~~~~~~~~n~~ 144 (557)
|++++|++. .+| ..+. ..+..+.+.+|+.
T Consensus 100 L~Ls~N~l~-~~~~~~~l~~l~~L~~L~l~~N~l 132 (168)
T 2ell_A 100 LNLSGNKLK-DISTLEPLKKLECLKSLDLFNCEV 132 (168)
T ss_dssp EECBSSSCC-SSGGGGGGSSCSCCCEEECCSSGG
T ss_pred EeccCCccC-cchhHHHHhcCCCCCEEEeeCCcC
Confidence 999999998 665 3332 3456677788764
No 291
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.30 E-value=1.7e-12 Score=114.32 Aligned_cols=106 Identities=21% Similarity=0.286 Sum_probs=87.2
Q ss_pred CCCceEEEEecCCCcc-ccCCccccCCCCCcEEECcCCCCCCCCCCccCCCCCcEEEecCccccCcCCCccCCCCccccc
Q 008707 37 TPPRITKIALSGKNLK-GEIPPELKNMEALTELWLDGNFLTGPLPDMSRLIDLRIVHLENNELTGSLPSYMGSLPNLQEL 115 (557)
Q Consensus 37 ~p~~l~~L~L~~n~l~-~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~l 115 (557)
.|++++.|+|++|+++ +.+|..+..+++|+.|+|++|.|++. +.+..+++|+.|+|++|++++.+|..+..+++|+.|
T Consensus 15 ~~~~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~-~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L 93 (149)
T 2je0_A 15 TPSDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI-ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTHL 93 (149)
T ss_dssp CGGGCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCC-TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCEE
T ss_pred CCccCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCc-hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCEE
Confidence 4578999999999998 78888888999999999999999888 778889999999999999996688877788999999
Q ss_pred ccccccCCCCCC--cccc--cCceeeeecCCCc
Q 008707 116 HIENNSFVGEIP--PALL--TGKVIFKYDNNPK 144 (557)
Q Consensus 116 ~l~~N~~~~~~p--~~~~--~~~~~~~~~~n~~ 144 (557)
++++|+++ .+| ..+. ..+..+.+.+|+.
T Consensus 94 ~ls~N~i~-~~~~~~~~~~l~~L~~L~l~~N~l 125 (149)
T 2je0_A 94 NLSGNKIK-DLSTIEPLKKLENLKSLDLFNCEV 125 (149)
T ss_dssp ECTTSCCC-SHHHHGGGGGCTTCCEEECTTCGG
T ss_pred ECCCCcCC-ChHHHHHHhhCCCCCEEeCcCCcc
Confidence 99999998 544 4332 3456677788764
No 292
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=99.29 E-value=3.4e-12 Score=137.33 Aligned_cols=118 Identities=18% Similarity=0.198 Sum_probs=98.8
Q ss_pred CCCCCeEEeeCC----------CCCceEEEEecCCCccccCCccccCCCCCcEEECcCCCCCCCCC-CccCCCCCcEEEe
Q 008707 25 PVPWEWVTCSTT----------TPPRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLP-DMSRLIDLRIVHL 93 (557)
Q Consensus 25 ~~~~~~v~c~~~----------~p~~l~~L~L~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~-~~~~l~~L~~L~l 93 (557)
.|+|.|+ |++. .+++|+.|+|++|++++..|..|.++++|++|+|++|+|++.+| .|.++++|++|+|
T Consensus 3 ~C~~~~~-c~~~~~~l~~ip~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L 81 (549)
T 2z81_A 3 SCDASGV-CDGRSRSFTSIPSGLTAAMKSLDLSFNKITYIGHGDLRACANLQVLILKSSRINTIEGDAFYSLGSLEHLDL 81 (549)
T ss_dssp EECTTSE-EECTTSCCSSCCSCCCTTCCEEECCSSCCCEECSSTTSSCTTCCEEECTTSCCCEECTTTTTTCTTCCEEEC
T ss_pred cCCCCce-EECCCCccccccccCCCCccEEECcCCccCccChhhhhcCCcccEEECCCCCcCccChhhccccccCCEEEC
Confidence 3589998 8763 35689999999999998888899999999999999999999988 5999999999999
Q ss_pred cCccccCcCCCccCCCCcccccccccccCCC-CCCcccc--cCceeeeecCCC
Q 008707 94 ENNELTGSLPSYMGSLPNLQELHIENNSFVG-EIPPALL--TGKVIFKYDNNP 143 (557)
Q Consensus 94 ~~N~l~~~~p~~~~~l~~L~~l~l~~N~~~~-~~p~~~~--~~~~~~~~~~n~ 143 (557)
++|++++..|..|+.+++|++|++++|++.+ .+|..+. ..+..+.+.+|.
T Consensus 82 s~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~L~~n~ 134 (549)
T 2z81_A 82 SDNHLSSLSSSWFGPLSSLKYLNLMGNPYQTLGVTSLFPNLTNLQTLRIGNVE 134 (549)
T ss_dssp TTSCCCSCCHHHHTTCTTCCEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESS
T ss_pred CCCccCccCHHHhccCCCCcEEECCCCcccccchhhhhhccCCccEEECCCCc
Confidence 9999996666679999999999999999984 2454443 345566677665
No 293
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.28 E-value=6e-12 Score=127.26 Aligned_cols=99 Identities=23% Similarity=0.290 Sum_probs=84.7
Q ss_pred CCCCCCCeEEeeCC--------CC--CceEEEEecC-CCccccCCccccCCCCCcEEECcCCCCCCCCC-CccCCCCCcE
Q 008707 23 CVPVPWEWVTCSTT--------TP--PRITKIALSG-KNLKGEIPPELKNMEALTELWLDGNFLTGPLP-DMSRLIDLRI 90 (557)
Q Consensus 23 c~~~~~~~v~c~~~--------~p--~~l~~L~L~~-n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~-~~~~l~~L~~ 90 (557)
|..|.|..|.|+.. .+ .+|+.|+|++ |.|++..|..|.+|++|+.|+|++|+|++++| .|.+|++|+.
T Consensus 5 c~~C~~~~v~~~~~n~l~~ip~l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~ 84 (347)
T 2ifg_A 5 CCPHGSSGLRCTRDGALDSLHHLPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSR 84 (347)
T ss_dssp SCCSSSSCEECCSSCCCTTTTTSCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCE
T ss_pred CccccCCEEEcCCCCCCCccCCCCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHHHhcCCcCCCE
Confidence 53578999999875 12 3589999996 99997777889999999999999999999999 5899999999
Q ss_pred EEecCccccCcCCC-ccCCCCcccccccccccCC
Q 008707 91 VHLENNELTGSLPS-YMGSLPNLQELHIENNSFV 123 (557)
Q Consensus 91 L~l~~N~l~~~~p~-~~~~l~~L~~l~l~~N~~~ 123 (557)
|+|++|+|+ .+|. .+..++ |+.|+|.+|.+.
T Consensus 85 L~l~~N~l~-~~~~~~~~~~~-L~~l~l~~N~~~ 116 (347)
T 2ifg_A 85 LNLSFNALE-SLSWKTVQGLS-LQELVLSGNPLH 116 (347)
T ss_dssp EECCSSCCS-CCCSTTTCSCC-CCEEECCSSCCC
T ss_pred EeCCCCccc-eeCHHHcccCC-ceEEEeeCCCcc
Confidence 999999999 5555 455554 999999999998
No 294
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.27 E-value=5.3e-12 Score=128.02 Aligned_cols=116 Identities=21% Similarity=0.256 Sum_probs=97.9
Q ss_pred CCCCCeEEeeCC----------CCCceEEEEecCCCccccCCccccCCCCCcEEECcCCCCCCCCC-CccCCCCCcEEEe
Q 008707 25 PVPWEWVTCSTT----------TPPRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLP-DMSRLIDLRIVHL 93 (557)
Q Consensus 25 ~~~~~~v~c~~~----------~p~~l~~L~L~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~-~~~~l~~L~~L~l 93 (557)
.|+|.++ |.+. .+++|+.|+|++|++++..+..|.++++|+.|+|++|+|++.++ .|.++++|+.|+|
T Consensus 29 ~C~~~~~-c~~~~~~l~~iP~~~~~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 107 (353)
T 2z80_A 29 SCDRNGI-CKGSSGSLNSIPSGLTEAVKSLDLSNNRITYISNSDLQRCVNLQALVLTSNGINTIEEDSFSSLGSLEHLDL 107 (353)
T ss_dssp EECTTSE-EECCSTTCSSCCTTCCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEEC
T ss_pred CCCCCeE-eeCCCCCcccccccccccCcEEECCCCcCcccCHHHhccCCCCCEEECCCCccCccCHhhcCCCCCCCEEEC
Confidence 5689987 7762 35689999999999996666689999999999999999999888 5999999999999
Q ss_pred cCccccCcCCC-ccCCCCcccccccccccCCCCCCc-ccc---cCceeeeecCCC
Q 008707 94 ENNELTGSLPS-YMGSLPNLQELHIENNSFVGEIPP-ALL---TGKVIFKYDNNP 143 (557)
Q Consensus 94 ~~N~l~~~~p~-~~~~l~~L~~l~l~~N~~~~~~p~-~~~---~~~~~~~~~~n~ 143 (557)
++|+++ .+|. .+..+++|+.|++++|++. .+|. ..+ ..+..+.+.+|.
T Consensus 108 s~n~l~-~~~~~~~~~l~~L~~L~L~~n~l~-~l~~~~~~~~l~~L~~L~l~~n~ 160 (353)
T 2z80_A 108 SYNYLS-NLSSSWFKPLSSLTFLNLLGNPYK-TLGETSLFSHLTKLQILRVGNMD 160 (353)
T ss_dssp CSSCCS-SCCHHHHTTCTTCSEEECTTCCCS-SSCSSCSCTTCTTCCEEEEEESS
T ss_pred CCCcCC-cCCHhHhCCCccCCEEECCCCCCc-ccCchhhhccCCCCcEEECCCCc
Confidence 999999 5555 4889999999999999999 7887 443 355667777774
No 295
>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*
Probab=99.26 E-value=1.2e-11 Score=119.69 Aligned_cols=139 Identities=14% Similarity=0.075 Sum_probs=108.0
Q ss_pred HhhcccCCCCceEEEEEEEcCCcEEEEEEccCccchhHHHHHHHHHHHhhcC-CCCccceeeEEEecCeeEEEEEecCCC
Q 008707 238 NFCKKIGKGSFGSVYYGKMKDGKEVAVKIMADSCSHRTQQFVTEVALLSRIH-HRNLVPLIGYCEEEHQRILVYEYMHNG 316 (557)
Q Consensus 238 ~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~il~~l~-h~nIv~~~~~~~~~~~~~lv~e~~~~g 316 (557)
++...++.|+.+.||++... ++.+++|+...........+.+|+++++.+. +..+.++++++.+.+..++||||++|.
T Consensus 17 ~~~~~~~g~s~~~v~~~~~~-~~~~vlK~~~~~~~~~~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~lv~e~i~G~ 95 (263)
T 3tm0_A 17 RCVKDTEGMSPAKVYKLVGE-NENLYLKMTDSRYKGTTYDVEREKDMMLWLEGKLPVPKVLHFERHDGWSNLLMSEADGV 95 (263)
T ss_dssp EEEECCSCCSSSEEEEEECS-SCEEEEEEECGGGTTSTTCHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCSSE
T ss_pred eeEeeccCCCCCeEEEEECC-CCcEEEEeCCcccCCCHHHHHHHHHHHHHHhcCCCCCeEEEEEecCCceEEEEEecCCe
Confidence 34566888888999999865 6899999986432223346889999999994 677889999999888999999999999
Q ss_pred ChhhhhhccCCCCCcCHHHHHHHHHHHHHHHHHHHcC-------------------------------------------
Q 008707 317 TLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTG------------------------------------------- 353 (557)
Q Consensus 317 sL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~------------------------------------------- 353 (557)
+|.+.+.. ......++.+++++|+.||+.
T Consensus 96 ~l~~~~~~--------~~~~~~~~~~l~~~l~~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (263)
T 3tm0_A 96 LCSEEYED--------EQSPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLADVDCENWEEDTPFKDP 167 (263)
T ss_dssp EHHHHCCT--------TTCHHHHHHHHHHHHHHHHHSCCTTCSCBCCHHHHHHHHHHHHHTTCSCCSGGGGSTTCSSSSH
T ss_pred ehhhccCC--------cccHHHHHHHHHHHHHHHhCCCcccCCCcchHHHHHHHHHHHHhccccccccccccccccCCCH
Confidence 98876321 112346889999999999971
Q ss_pred -------------CCCCeEeeccCCCCEEeCCCCcEEEecccCcc
Q 008707 354 -------------CNPGIIHRDVKSSNILLDINMRAKVSDFGLSR 385 (557)
Q Consensus 354 -------------~~~~ivH~dlk~~NIll~~~~~~kl~Dfgla~ 385 (557)
....++|||+++.||+++++..+.|+||+.+.
T Consensus 168 ~~l~~~l~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~lIDwe~a~ 212 (263)
T 3tm0_A 168 RELYDFLKTEKPEEELVFSHGDLGDSNIFVKDGKVSGFIDLGRSG 212 (263)
T ss_dssp HHHHHHHHHCCCCCCEEEECSSCCTTSEEEETTEEEEECCCTTCE
T ss_pred HHHHHHHHhcCCCCCceEECCCCCcCcEEEECCcEEEEEEchhcc
Confidence 01458999999999999876556799998764
No 296
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.26 E-value=7.2e-12 Score=131.04 Aligned_cols=108 Identities=24% Similarity=0.335 Sum_probs=94.7
Q ss_pred CCceEEEEecCCCccccCCccccCCCCCcEEECcCCCCCCCCC-CccCCCCCcEEEecCccccCcCCCccCCCCcccccc
Q 008707 38 PPRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLP-DMSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELH 116 (557)
Q Consensus 38 p~~l~~L~L~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~-~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~l~ 116 (557)
.++|+.|+|++|+++ .+| .+..+++|+.|+|++|+|++..| .|.++++|+.|+|++|+|++..|..|..+++|+.|+
T Consensus 184 l~~L~~L~L~~n~l~-~~~-~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 261 (440)
T 3zyj_A 184 LSNLRYLNLAMCNLR-EIP-NLTPLIKLDELDLSGNHLSAIRPGSFQGLMHLQKLWMIQSQIQVIERNAFDNLQSLVEIN 261 (440)
T ss_dssp CSSCCEEECTTSCCS-SCC-CCTTCSSCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTSSTTCTTCCEEE
T ss_pred ccccCeecCCCCcCc-ccc-ccCCCcccCEEECCCCccCccChhhhccCccCCEEECCCCceeEEChhhhcCCCCCCEEE
Confidence 467889999999998 676 47888999999999999999887 599999999999999999977788899999999999
Q ss_pred cccccCCCCCCccccc---CceeeeecCCCccccc
Q 008707 117 IENNSFVGEIPPALLT---GKVIFKYDNNPKLHKE 148 (557)
Q Consensus 117 l~~N~~~~~~p~~~~~---~~~~~~~~~n~~~~~~ 148 (557)
|++|+++ .+|...+. .+..+.+++||+.|++
T Consensus 262 L~~N~l~-~~~~~~~~~l~~L~~L~L~~Np~~CdC 295 (440)
T 3zyj_A 262 LAHNNLT-LLPHDLFTPLHHLERIHLHHNPWNCNC 295 (440)
T ss_dssp CTTSCCC-CCCTTTTSSCTTCCEEECCSSCEECSS
T ss_pred CCCCCCC-ccChhHhccccCCCEEEcCCCCccCCC
Confidence 9999999 78876654 4567899999999986
No 297
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=99.26 E-value=7e-12 Score=131.56 Aligned_cols=110 Identities=19% Similarity=0.229 Sum_probs=95.8
Q ss_pred CCceEEEEecCCCccccCCccccCCCCCcEEECcCCCCCCCCC-CccCCCCCcEEEecCccccCcCCCccCCCCcccccc
Q 008707 38 PPRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLP-DMSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELH 116 (557)
Q Consensus 38 p~~l~~L~L~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~-~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~l~ 116 (557)
.++|+.|+|++|.+++..|..|.++++|+.|+|++|+|++.+| .|..+++|+.|+|++|++++..|..+..+++|+.|+
T Consensus 298 l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 377 (455)
T 3v47_A 298 FTDLEQLTLAQNEINKIDDNAFWGLTHLLKLNLSQNFLGSIDSRMFENLDKLEVLDLSYNHIRALGDQSFLGLPNLKELA 377 (455)
T ss_dssp CTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGGTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEE
T ss_pred CCCCCEEECCCCcccccChhHhcCcccCCEEECCCCccCCcChhHhcCcccCCEEECCCCcccccChhhccccccccEEE
Confidence 3678999999999997788889999999999999999988877 588999999999999999977788899999999999
Q ss_pred cccccCCCCCCccccc---CceeeeecCCCccccc
Q 008707 117 IENNSFVGEIPPALLT---GKVIFKYDNNPKLHKE 148 (557)
Q Consensus 117 l~~N~~~~~~p~~~~~---~~~~~~~~~n~~~~~~ 148 (557)
+++|+++ .+|...+. .+..+.+++|++.|++
T Consensus 378 L~~N~l~-~~~~~~~~~l~~L~~L~l~~N~l~~~~ 411 (455)
T 3v47_A 378 LDTNQLK-SVPDGIFDRLTSLQKIWLHTNPWDCSC 411 (455)
T ss_dssp CCSSCCS-CCCTTTTTTCTTCCEEECCSSCBCCCT
T ss_pred CCCCccc-cCCHhHhccCCcccEEEccCCCcccCC
Confidence 9999999 67776543 5677889999998875
No 298
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.26 E-value=1.1e-11 Score=120.91 Aligned_cols=124 Identities=18% Similarity=0.142 Sum_probs=99.9
Q ss_pred CCCCCC-CCCeEEeeC--------CCCCceEEEEecCCCccccCCccccCCCCCcEEECcCCCCCCCCC-CccCCCCCcE
Q 008707 21 DPCVPV-PWEWVTCST--------TTPPRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLP-DMSRLIDLRI 90 (557)
Q Consensus 21 ~~c~~~-~~~~v~c~~--------~~p~~l~~L~L~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~-~~~~l~~L~~ 90 (557)
|||... ....+.|.. ..|++++.|+|++|++++..+..|.++++|+.|+|++|+|++.++ .|.++++|+.
T Consensus 1 ~~C~~~~~~~~~~c~~~~l~~ip~~l~~~l~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~ 80 (276)
T 2z62_A 1 EPCVEVVPNITYQCMELNFYKIPDNLPFSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLST 80 (276)
T ss_dssp CCSEEEETTTEEECTTSCCSSCCSSSCTTCCEEECTTCCCCEECTTTTTTCTTCSEEECTTCCCCEECTTTTTTCTTCCE
T ss_pred CCceeccCCceEEecCCCccccCCCCCCCccEEECCCCcccccCHhHhccccCCcEEECCCCcCCccCHHHccCCcCCCE
Confidence 567432 222466665 246789999999999996666789999999999999999999888 5999999999
Q ss_pred EEecCccccCcCCCccCCCCcccccccccccCCCCCCcccc---cCceeeeecCCCcc
Q 008707 91 VHLENNELTGSLPSYMGSLPNLQELHIENNSFVGEIPPALL---TGKVIFKYDNNPKL 145 (557)
Q Consensus 91 L~l~~N~l~~~~p~~~~~l~~L~~l~l~~N~~~~~~p~~~~---~~~~~~~~~~n~~~ 145 (557)
|+|++|++++..|..+..+++|+.|++++|++. .++...+ ..+..+.+.+|...
T Consensus 81 L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~-~~~~~~~~~l~~L~~L~l~~n~l~ 137 (276)
T 2z62_A 81 LILTGNPIQSLALGAFSGLSSLQKLVAVETNLA-SLENFPIGHLKTLKELNVAHNLIQ 137 (276)
T ss_dssp EECTTCCCCEECTTTTTTCTTCCEEECTTSCCC-CSTTCCCTTCTTCCEEECCSSCCC
T ss_pred EECCCCccCccChhhhcCCccccEEECCCCCcc-ccCchhcccCCCCCEEECcCCccc
Confidence 999999999777788999999999999999998 5555332 35566777877643
No 299
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=99.26 E-value=6.5e-12 Score=126.00 Aligned_cols=107 Identities=16% Similarity=0.239 Sum_probs=82.1
Q ss_pred CCceEEEEecCCCccccCCccccCCCCCcEEECcCCCCCCCCCCccCCCCCcEEEecCccccCcCCCccCCCCccccccc
Q 008707 38 PPRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPDMSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELHI 117 (557)
Q Consensus 38 p~~l~~L~L~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~l~l 117 (557)
.++|+.|+|++|+|+ .+|..+.++++|+.|+|++|++++.++.+..+++|+.|+|++|++.+.+|..++.+++|+.|++
T Consensus 182 l~~L~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~N~l~~l~~~l~~l~~L~~L~Ls~n~~~~~~p~~~~~l~~L~~L~L 260 (328)
T 4fcg_A 182 LVNLQSLRLEWTGIR-SLPASIANLQNLKSLKIRNSPLSALGPAIHHLPKLEELDLRGCTALRNYPPIFGGRAPLKRLIL 260 (328)
T ss_dssp STTCCEEEEEEECCC-CCCGGGGGCTTCCEEEEESSCCCCCCGGGGGCTTCCEEECTTCTTCCBCCCCTTCCCCCCEEEC
T ss_pred CCCCCEEECcCCCcC-cchHhhcCCCCCCEEEccCCCCCcCchhhccCCCCCEEECcCCcchhhhHHHhcCCCCCCEEEC
Confidence 356778888888887 7777788888888888888888876667888888888888888887788888888888888888
Q ss_pred ccccCCCCCCccccc--CceeeeecCCCcc
Q 008707 118 ENNSFVGEIPPALLT--GKVIFKYDNNPKL 145 (557)
Q Consensus 118 ~~N~~~~~~p~~~~~--~~~~~~~~~n~~~ 145 (557)
++|++.+.+|..+.. .+..+.+.+|+..
T Consensus 261 ~~n~~~~~~p~~~~~l~~L~~L~L~~n~~~ 290 (328)
T 4fcg_A 261 KDCSNLLTLPLDIHRLTQLEKLDLRGCVNL 290 (328)
T ss_dssp TTCTTCCBCCTTGGGCTTCCEEECTTCTTC
T ss_pred CCCCchhhcchhhhcCCCCCEEeCCCCCch
Confidence 888777778776543 4566677777644
No 300
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.25 E-value=7.1e-12 Score=122.99 Aligned_cols=109 Identities=19% Similarity=0.286 Sum_probs=65.0
Q ss_pred CceEEEEecCCCccccCCccccCCCCCcEEECcCCCCCCCCCC-ccCCCCCcEEEecCccccCcCCCccCCCCccccccc
Q 008707 39 PRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPD-MSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELHI 117 (557)
Q Consensus 39 ~~l~~L~L~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~-~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~l~l 117 (557)
++|+.|+|++|.+++..+..|.++++|+.|+|++|+|++.++. |..+++|+.|+|++|++++..|..+..+++|+.|++
T Consensus 129 ~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l 208 (285)
T 1ozn_A 129 AALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYL 208 (285)
T ss_dssp TTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEEC
T ss_pred cCCCEEECCCCcccccCHhHhccCCCccEEECCCCcccccCHHHhcCccccCEEECCCCcccccCHhHccCcccccEeeC
Confidence 4556666666666633334455566666666666666655553 566666666666666666555666666666666666
Q ss_pred ccccCCCCCCcccc---cCceeeeecCCCccccc
Q 008707 118 ENNSFVGEIPPALL---TGKVIFKYDNNPKLHKE 148 (557)
Q Consensus 118 ~~N~~~~~~p~~~~---~~~~~~~~~~n~~~~~~ 148 (557)
++|++. .+|...+ ..+..+.+.+|++.|++
T Consensus 209 ~~n~l~-~~~~~~~~~l~~L~~L~l~~N~~~c~~ 241 (285)
T 1ozn_A 209 FANNLS-ALPTEALAPLRALQYLRLNDNPWVCDC 241 (285)
T ss_dssp CSSCCS-CCCHHHHTTCTTCCEEECCSSCEECSG
T ss_pred CCCcCC-cCCHHHcccCcccCEEeccCCCccCCC
Confidence 666666 4444322 24456677777777754
No 301
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.25 E-value=9e-12 Score=123.58 Aligned_cols=111 Identities=16% Similarity=0.169 Sum_probs=86.5
Q ss_pred CCceEEEEecCCCccc-cCCccccCCCCCcEEECcCCCCCCCCC-CccCCCCCcEEEecCccccCcCCCccCCCCccccc
Q 008707 38 PPRITKIALSGKNLKG-EIPPELKNMEALTELWLDGNFLTGPLP-DMSRLIDLRIVHLENNELTGSLPSYMGSLPNLQEL 115 (557)
Q Consensus 38 p~~l~~L~L~~n~l~~-~~p~~~~~l~~L~~L~l~~N~l~~~~~-~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~l 115 (557)
.++|+.|+|++|.+++ .+|..+..+++|+.|+|++|+|++.+| .|..+++|+.|+|++|++++..+..+..+++|+.|
T Consensus 149 l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L 228 (306)
T 2z66_A 149 LSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVL 228 (306)
T ss_dssp CTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCSBCCSGGGTTCTTCCEE
T ss_pred CcCCCEEECCCCccccccchhHHhhCcCCCEEECCCCCcCCcCHHHhcCCCCCCEEECCCCccCccChhhccCcccCCEe
Confidence 3678888888888876 577788888888888888888888776 58888888888888888885555567788888888
Q ss_pred ccccccCCCCCCccccc---CceeeeecCCCccccc
Q 008707 116 HIENNSFVGEIPPALLT---GKVIFKYDNNPKLHKE 148 (557)
Q Consensus 116 ~l~~N~~~~~~p~~~~~---~~~~~~~~~n~~~~~~ 148 (557)
++++|++.+..|..+.. .+..+.+++|++.|++
T Consensus 229 ~L~~N~l~~~~~~~~~~~~~~L~~L~L~~N~~~~~c 264 (306)
T 2z66_A 229 DYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFACTC 264 (306)
T ss_dssp ECTTSCCCBCSSSSCCCCCTTCCEEECTTCCEECSG
T ss_pred ECCCCCCcccCHHHHHhhhccCCEEEccCCCeeccc
Confidence 88888888666665543 4567788888888764
No 302
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.25 E-value=1.7e-11 Score=128.73 Aligned_cols=115 Identities=20% Similarity=0.235 Sum_probs=98.1
Q ss_pred CCeEEeeC--------CCCCceEEEEecCCCccccCCccccCCCCCcEEECcCCCCCCCCC-CccCCCCCcEEEecCccc
Q 008707 28 WEWVTCST--------TTPPRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLP-DMSRLIDLRIVHLENNEL 98 (557)
Q Consensus 28 ~~~v~c~~--------~~p~~l~~L~L~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~-~~~~l~~L~~L~l~~N~l 98 (557)
|..|.|+. +.|++++.|+|++|+|++..|..|.++++|+.|+|++|+|++.++ .|.++++|+.|+|++|+|
T Consensus 56 ~~~v~c~~~~l~~iP~~~~~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~l 135 (452)
T 3zyi_A 56 FSKVVCTRRGLSEVPQGIPSNTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNSIRQIEVGAFNGLASLNTLELFDNWL 135 (452)
T ss_dssp SCEEECCSSCCSSCCSCCCTTCSEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCC
T ss_pred CcEEEECCCCcCccCCCCCCCccEEECcCCcCceECHHHcCCCCCCCEEECCCCccCCcChhhccCcccCCEEECCCCcC
Confidence 46788876 346789999999999998888999999999999999999999987 599999999999999999
Q ss_pred cCcCCCccCCCCcccccccccccCCCCCCccccc---CceeeeecCCC
Q 008707 99 TGSLPSYMGSLPNLQELHIENNSFVGEIPPALLT---GKVIFKYDNNP 143 (557)
Q Consensus 99 ~~~~p~~~~~l~~L~~l~l~~N~~~~~~p~~~~~---~~~~~~~~~n~ 143 (557)
++..+..|..+++|+.|++++|++. .+|...+. .+..+.+.+|.
T Consensus 136 ~~~~~~~~~~l~~L~~L~L~~N~l~-~~~~~~~~~l~~L~~L~l~~~~ 182 (452)
T 3zyi_A 136 TVIPSGAFEYLSKLRELWLRNNPIE-SIPSYAFNRVPSLMRLDLGELK 182 (452)
T ss_dssp SBCCTTTSSSCTTCCEEECCSCCCC-EECTTTTTTCTTCCEEECCCCT
T ss_pred CccChhhhcccCCCCEEECCCCCcc-eeCHhHHhcCCcccEEeCCCCC
Confidence 9555566889999999999999998 78876554 34556666644
No 303
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.25 E-value=1.9e-11 Score=120.37 Aligned_cols=107 Identities=28% Similarity=0.348 Sum_probs=92.3
Q ss_pred CCCceEEEEecCCCccccCCccccCCCCCcEEECcCCCCCCCCC-CccCCCCCcEEEecCccccCcCCCccCCCCccccc
Q 008707 37 TPPRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLP-DMSRLIDLRIVHLENNELTGSLPSYMGSLPNLQEL 115 (557)
Q Consensus 37 ~p~~l~~L~L~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~-~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~l 115 (557)
..++|+.|+|++|.|+ .+|..+.++++|+.|+|++|+|++.++ .|.++++|+.|+|++|+|++..|..|..+++|+.|
T Consensus 75 ~l~~L~~L~Ls~N~l~-~l~~~~~~l~~L~~L~l~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L 153 (290)
T 1p9a_G 75 TLPVLGTLDLSHNQLQ-SLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKL 153 (290)
T ss_dssp CCTTCCEEECCSSCCS-SCCCCTTTCTTCCEEECCSSCCCCCCSSTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEE
T ss_pred CCCcCCEEECCCCcCC-cCchhhccCCCCCEEECCCCcCcccCHHHHcCCCCCCEEECCCCCCCccChhhcccccCCCEE
Confidence 4578999999999999 889889999999999999999999988 49999999999999999995555667889999999
Q ss_pred ccccccCCCCCCccccc---CceeeeecCCCcc
Q 008707 116 HIENNSFVGEIPPALLT---GKVIFKYDNNPKL 145 (557)
Q Consensus 116 ~l~~N~~~~~~p~~~~~---~~~~~~~~~n~~~ 145 (557)
++++|+|+ .+|..++. .+..+.+++|...
T Consensus 154 ~L~~N~l~-~l~~~~~~~l~~L~~L~L~~N~l~ 185 (290)
T 1p9a_G 154 SLANNNLT-ELPAGLLNGLENLDTLLLQENSLY 185 (290)
T ss_dssp ECTTSCCS-CCCTTTTTTCTTCCEEECCSSCCC
T ss_pred ECCCCcCC-ccCHHHhcCcCCCCEEECCCCcCC
Confidence 99999999 88887754 4567788888654
No 304
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=99.24 E-value=5.8e-12 Score=132.18 Aligned_cols=118 Identities=16% Similarity=0.179 Sum_probs=98.2
Q ss_pred CCeEEeeCC-------CCCceEEEEecCCCccccCCccccCCCCCcEEECcCCCCCCCCC--CccCCCCCcEEEecCccc
Q 008707 28 WEWVTCSTT-------TPPRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLP--DMSRLIDLRIVHLENNEL 98 (557)
Q Consensus 28 ~~~v~c~~~-------~p~~l~~L~L~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~--~~~~l~~L~~L~l~~N~l 98 (557)
++.|.|+.. .|++|+.|+|++|.+++..|..|.++++|++|+|++|.+.+.++ .|.++++|++|+|++|++
T Consensus 12 ~~~~~c~~~~l~~lp~l~~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~~~~~i~~~~~~~l~~L~~L~Ls~n~l 91 (455)
T 3v47_A 12 GYNAICINRGLHQVPELPAHVNYVDLSLNSIAELNETSFSRLQDLQFLKVEQQTPGLVIRNNTFRGLSSLIILKLDYNQF 91 (455)
T ss_dssp TTEEECCSSCCSSCCCCCTTCCEEECCSSCCCEECTTTTSSCTTCCEEECCCCSTTCEECTTTTTTCTTCCEEECTTCTT
T ss_pred ccccCcCCCCcccCCCCCCccCEEEecCCccCcCChhHhccCccccEEECcCCcccceECcccccccccCCEEeCCCCcc
Confidence 334777762 46789999999999998889999999999999999999987654 499999999999999999
Q ss_pred cCcCCCccCCCCcccccccccccCCCCCCcc--c--ccCceeeeecCCCcc
Q 008707 99 TGSLPSYMGSLPNLQELHIENNSFVGEIPPA--L--LTGKVIFKYDNNPKL 145 (557)
Q Consensus 99 ~~~~p~~~~~l~~L~~l~l~~N~~~~~~p~~--~--~~~~~~~~~~~n~~~ 145 (557)
++..|..|+++++|+.|++++|++.+.+|.. + ...+..+.+++|...
T Consensus 92 ~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~L~~n~l~ 142 (455)
T 3v47_A 92 LQLETGAFNGLANLEVLTLTQCNLDGAVLSGNFFKPLTSLEMLVLRDNNIK 142 (455)
T ss_dssp CEECTTTTTTCTTCCEEECTTSCCBTHHHHSSTTTTCTTCCEEECCSSBCC
T ss_pred CccChhhccCcccCCEEeCCCCCCCccccCcccccCcccCCEEECCCCccC
Confidence 9788999999999999999999998655543 2 235567778887643
No 305
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.22 E-value=1.3e-11 Score=129.58 Aligned_cols=108 Identities=23% Similarity=0.316 Sum_probs=94.8
Q ss_pred CCceEEEEecCCCccccCCccccCCCCCcEEECcCCCCCCCCC-CccCCCCCcEEEecCccccCcCCCccCCCCcccccc
Q 008707 38 PPRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLP-DMSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELH 116 (557)
Q Consensus 38 p~~l~~L~L~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~-~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~l~ 116 (557)
.++|+.|+|++|+++ .+| .+..+++|+.|+|++|+|++.+| .|.++++|+.|+|++|++++..|..|..+++|+.|+
T Consensus 195 l~~L~~L~L~~n~l~-~~~-~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 272 (452)
T 3zyi_A 195 LFNLKYLNLGMCNIK-DMP-NLTPLVGLEELEMSGNHFPEIRPGSFHGLSSLKKLWVMNSQVSLIERNAFDGLASLVELN 272 (452)
T ss_dssp CTTCCEEECTTSCCS-SCC-CCTTCTTCCEEECTTSCCSEECGGGGTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEE
T ss_pred CCCCCEEECCCCccc-ccc-cccccccccEEECcCCcCcccCcccccCccCCCEEEeCCCcCceECHHHhcCCCCCCEEE
Confidence 467899999999998 555 58889999999999999999888 599999999999999999988888899999999999
Q ss_pred cccccCCCCCCccccc---CceeeeecCCCccccc
Q 008707 117 IENNSFVGEIPPALLT---GKVIFKYDNNPKLHKE 148 (557)
Q Consensus 117 l~~N~~~~~~p~~~~~---~~~~~~~~~n~~~~~~ 148 (557)
+++|+++ .+|...+. .+..+.+++||+.|++
T Consensus 273 L~~N~l~-~~~~~~~~~l~~L~~L~L~~Np~~CdC 306 (452)
T 3zyi_A 273 LAHNNLS-SLPHDLFTPLRYLVELHLHHNPWNCDC 306 (452)
T ss_dssp CCSSCCS-CCCTTSSTTCTTCCEEECCSSCEECST
T ss_pred CCCCcCC-ccChHHhccccCCCEEEccCCCcCCCC
Confidence 9999999 78876654 4567899999999986
No 306
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=99.22 E-value=1e-11 Score=135.30 Aligned_cols=110 Identities=19% Similarity=0.136 Sum_probs=95.7
Q ss_pred CCceEEEEecCCCccc-cCCccccCCCCCcEEECcCCCCCCCCC-CccCCCCCcEEEecCccccCcCCCccCCCCccccc
Q 008707 38 PPRITKIALSGKNLKG-EIPPELKNMEALTELWLDGNFLTGPLP-DMSRLIDLRIVHLENNELTGSLPSYMGSLPNLQEL 115 (557)
Q Consensus 38 p~~l~~L~L~~n~l~~-~~p~~~~~l~~L~~L~l~~N~l~~~~~-~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~l 115 (557)
.++|+.|+|++|.+++ .+|..+..+++|+.|+|++|++++.+| .|.++++|+.|+|++|++++..|..+..+++|+.|
T Consensus 447 l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L 526 (606)
T 3vq2_A 447 LTSLNTLKMAGNSFKDNTLSNVFANTTNLTFLDLSKCQLEQISWGVFDTLHRLQLLNMSHNNLLFLDSSHYNQLYSLSTL 526 (606)
T ss_dssp CTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCEEGGGTTTCTTCCEE
T ss_pred CCCCCEEECCCCcCCCcchHHhhccCCCCCEEECCCCcCCccChhhhcccccCCEEECCCCcCCCcCHHHccCCCcCCEE
Confidence 3678999999999987 478889999999999999999999888 48999999999999999998889999999999999
Q ss_pred ccccccCCCCCCccccc---CceeeeecCCCccccc
Q 008707 116 HIENNSFVGEIPPALLT---GKVIFKYDNNPKLHKE 148 (557)
Q Consensus 116 ~l~~N~~~~~~p~~~~~---~~~~~~~~~n~~~~~~ 148 (557)
++++|+++ .+|..+.. .+..+.+.+||+.|++
T Consensus 527 ~l~~N~l~-~~p~~~~~l~~~L~~l~l~~N~~~c~c 561 (606)
T 3vq2_A 527 DCSFNRIE-TSKGILQHFPKSLAFFNLTNNSVACIC 561 (606)
T ss_dssp ECTTSCCC-CEESCGGGSCTTCCEEECCSCCCCCSS
T ss_pred ECCCCcCc-ccCHhHhhhcccCcEEEccCCCcccCC
Confidence 99999998 88887543 3677899999999976
No 307
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=99.21 E-value=2.4e-11 Score=132.31 Aligned_cols=123 Identities=20% Similarity=0.177 Sum_probs=97.1
Q ss_pred CCCCCC-CCCeEEeeC--------CCCCceEEEEecCCCccccCCccccCCCCCcEEECcCCCCCCCCC-CccCCCCCcE
Q 008707 21 DPCVPV-PWEWVTCST--------TTPPRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLP-DMSRLIDLRI 90 (557)
Q Consensus 21 ~~c~~~-~~~~v~c~~--------~~p~~l~~L~L~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~-~~~~l~~L~~ 90 (557)
+||... .-..|.|+. ..|++++.|+|++|.+++..|..|.++++|+.|+|++|+|++.+| .|.++++|++
T Consensus 5 ~~c~~~~~~~~~~c~~~~l~~ip~~~~~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~i~~~~~~~l~~L~~ 84 (606)
T 3vq2_A 5 NPCIEVVPNITYQCMDQKLSKVPDDIPSSTKNIDLSFNPLKILKSYSFSNFSELQWLDLSRCEIETIEDKAWHGLHHLSN 84 (606)
T ss_dssp -CCEEEETTTEEECTTSCCSSCCTTSCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCE
T ss_pred CCceecCCCCceEccCCCcccCCCCCCCCcCEEECCCCCcCEeChhhccCCccCcEEeCCCCcccccCHHHhhchhhcCE
Confidence 466431 223577765 346789999999999997777789999999999999999999888 5899999999
Q ss_pred EEecCccccCcCCCccCCCCcccccccccccCCCCCCc-ccc--cCceeeeecCCCc
Q 008707 91 VHLENNELTGSLPSYMGSLPNLQELHIENNSFVGEIPP-ALL--TGKVIFKYDNNPK 144 (557)
Q Consensus 91 L~l~~N~l~~~~p~~~~~l~~L~~l~l~~N~~~~~~p~-~~~--~~~~~~~~~~n~~ 144 (557)
|+|++|++++..|..|+++++|++|++++|++. .+|+ .+. ..+..+.+.+|..
T Consensus 85 L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~-~~~~~~~~~l~~L~~L~L~~n~l 140 (606)
T 3vq2_A 85 LILTGNPIQSFSPGSFSGLTSLENLVAVETKLA-SLESFPIGQLITLKKLNVAHNFI 140 (606)
T ss_dssp EECTTCCCCCCCTTSSTTCTTCCEEECTTSCCC-CSSSSCCTTCTTCCEEECCSSCC
T ss_pred eECCCCcccccChhhcCCcccCCEEEccCCccc-cccccccCCCCCCCEEeCCCCcc
Confidence 999999999777889999999999999999998 5553 332 2445666677654
No 308
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=99.21 E-value=2.7e-11 Score=121.69 Aligned_cols=117 Identities=21% Similarity=0.325 Sum_probs=100.0
Q ss_pred CCCCCeEEeeC--------CCCCceEEEEecCCCccccCCccccCCCCCcEEECcCCCCCCCCC-CccCCCCCcEEEecC
Q 008707 25 PVPWEWVTCST--------TTPPRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLP-DMSRLIDLRIVHLEN 95 (557)
Q Consensus 25 ~~~~~~v~c~~--------~~p~~l~~L~L~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~-~~~~l~~L~~L~l~~ 95 (557)
.|.|+.+.|+. ..+++++.|+|++|++++..|..|.++++|+.|+|++|+|++..| .|.++++|+.|+|++
T Consensus 32 ~c~l~~l~~~~~~l~~ip~~~~~~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~ 111 (332)
T 2ft3_A 32 HCHLRVVQCSDLGLKAVPKEISPDTTLLDLQNNDISELRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLYISK 111 (332)
T ss_dssp EEETTEEECCSSCCSSCCSCCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGSTTCTTCCEEECCS
T ss_pred cccCCEEECCCCCccccCCCCCCCCeEEECCCCcCCccCHhHhhCCCCCcEEECCCCccCccCHhHhhCcCCCCEEECCC
Confidence 56899999986 235689999999999997777889999999999999999999877 599999999999999
Q ss_pred ccccCcCCCccCCCCcccccccccccCCCCCCccccc---CceeeeecCCCcc
Q 008707 96 NELTGSLPSYMGSLPNLQELHIENNSFVGEIPPALLT---GKVIFKYDNNPKL 145 (557)
Q Consensus 96 N~l~~~~p~~~~~l~~L~~l~l~~N~~~~~~p~~~~~---~~~~~~~~~n~~~ 145 (557)
|+++ .+|..+. ++|+.|++++|++. .+|...+. .+..+.+.+|...
T Consensus 112 n~l~-~l~~~~~--~~L~~L~l~~n~i~-~~~~~~~~~l~~L~~L~l~~n~l~ 160 (332)
T 2ft3_A 112 NHLV-EIPPNLP--SSLVELRIHDNRIR-KVPKGVFSGLRNMNCIEMGGNPLE 160 (332)
T ss_dssp SCCC-SCCSSCC--TTCCEEECCSSCCC-CCCSGGGSSCSSCCEEECCSCCCB
T ss_pred CcCC-ccCcccc--ccCCEEECCCCccC-ccCHhHhCCCccCCEEECCCCccc
Confidence 9999 8888766 79999999999998 77776543 4566778887653
No 309
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.20 E-value=2.7e-11 Score=114.86 Aligned_cols=109 Identities=23% Similarity=0.227 Sum_probs=96.7
Q ss_pred CCceEEEEecCCCccccCCccccCCCCCcEEECcCCCCCCCCCC-ccCCCCCcEEEecCccccCcCCCccCCCCcccccc
Q 008707 38 PPRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPD-MSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELH 116 (557)
Q Consensus 38 p~~l~~L~L~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~-~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~l~ 116 (557)
.++|+.|+|++|+|++..+..|.++++|+.|+|++|+|+++++. |..+++|+.|+|++|+|+ .+|..+..+++|+.|+
T Consensus 63 l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~ 141 (229)
T 3e6j_A 63 LINLKELYLGSNQLGALPVGVFDSLTQLTVLDLGTNQLTVLPSAVFDRLVHLKELFMCCNKLT-ELPRGIERLTHLTHLA 141 (229)
T ss_dssp CTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCC-SCCTTGGGCTTCSEEE
T ss_pred ccCCcEEECCCCCCCCcChhhcccCCCcCEEECCCCcCCccChhHhCcchhhCeEeccCCccc-ccCcccccCCCCCEEE
Confidence 46899999999999844445679999999999999999999885 899999999999999999 9999999999999999
Q ss_pred cccccCCCCCCccccc---CceeeeecCCCccccc
Q 008707 117 IENNSFVGEIPPALLT---GKVIFKYDNNPKLHKE 148 (557)
Q Consensus 117 l~~N~~~~~~p~~~~~---~~~~~~~~~n~~~~~~ 148 (557)
+++|+|. .+|...+. .+..+.+.+||+.|++
T Consensus 142 L~~N~l~-~~~~~~~~~l~~L~~L~l~~N~~~c~c 175 (229)
T 3e6j_A 142 LDQNQLK-SIPHGAFDRLSSLTHAYLFGNPWDCEC 175 (229)
T ss_dssp CCSSCCC-CCCTTTTTTCTTCCEEECTTSCBCTTB
T ss_pred CCCCcCC-ccCHHHHhCCCCCCEEEeeCCCccCCc
Confidence 9999999 77766543 5677899999999875
No 310
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.19 E-value=2.4e-11 Score=111.98 Aligned_cols=86 Identities=26% Similarity=0.292 Sum_probs=78.2
Q ss_pred CceEEEEecCCCccccCCccccCCCCCcEEECcCCCCCCCCC-CccCCCCCcEEEecCccccCcCCCccCCCCccccccc
Q 008707 39 PRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLP-DMSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELHI 117 (557)
Q Consensus 39 ~~l~~L~L~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~-~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~l~l 117 (557)
++|+.|+|++|.|++..|..|.++++|+.|+|++|+|+++++ .|..+++|+.|+|++|+|++..+..|..+++|+.|++
T Consensus 54 ~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~l~~i~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L 133 (193)
T 2wfh_A 54 KHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNRLRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAI 133 (193)
T ss_dssp TTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEEC
T ss_pred cCCCEEECCCCcCCEeCHhHccCCCCCCEEECCCCccCEeCHHHhCCCCCCCEEECCCCCCCeeChhhhhcCccccEEEe
Confidence 679999999999997777789999999999999999999998 5999999999999999999444456889999999999
Q ss_pred ccccCCC
Q 008707 118 ENNSFVG 124 (557)
Q Consensus 118 ~~N~~~~ 124 (557)
++|.+..
T Consensus 134 ~~N~~~C 140 (193)
T 2wfh_A 134 GANPLYC 140 (193)
T ss_dssp CSSCEEC
T ss_pred CCCCeec
Confidence 9999873
No 311
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.19 E-value=1.3e-11 Score=117.72 Aligned_cols=121 Identities=21% Similarity=0.319 Sum_probs=96.0
Q ss_pred CCCCCCCCCeEE--eeC-----CCCCceEEEEecCCCccccCCccccCCCCCcEEECcCCC-CCCCCC-CccCCCCCcEE
Q 008707 21 DPCVPVPWEWVT--CST-----TTPPRITKIALSGKNLKGEIPPELKNMEALTELWLDGNF-LTGPLP-DMSRLIDLRIV 91 (557)
Q Consensus 21 ~~c~~~~~~~v~--c~~-----~~p~~l~~L~L~~n~l~~~~p~~~~~l~~L~~L~l~~N~-l~~~~~-~~~~l~~L~~L 91 (557)
++|....|.++. |.. ..|++++.|+|++|++++..+..|.++++|+.|+|++|+ ++++++ .|.++++|+.|
T Consensus 6 ~~C~C~~~~~~~v~c~~l~~ip~~~~~l~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L 85 (239)
T 2xwt_C 6 PPCECHQEEDFRVTCKDIQRIPSLPPSTQTLKLIETHLRTIPSHAFSNLPNISRIYVSIDVTLQQLESHSFYNLSKVTHI 85 (239)
T ss_dssp SSCSEEECSTTEEEECSCSSCCCCCTTCCEEEEESCCCSEECTTTTTTCTTCCEEEEECCSSCCEECTTTEESCTTCCEE
T ss_pred CCCeeCCCCcceeEccCccccCCCCCcccEEEEeCCcceEECHHHccCCCCCcEEeCCCCCCcceeCHhHcCCCcCCcEE
Confidence 356432335544 643 146789999999999996666689999999999999997 988888 69999999999
Q ss_pred EecC-ccccCcCCCccCCCCcccccccccccCCCCCCcccc--cCce---eeeecCCC
Q 008707 92 HLEN-NELTGSLPSYMGSLPNLQELHIENNSFVGEIPPALL--TGKV---IFKYDNNP 143 (557)
Q Consensus 92 ~l~~-N~l~~~~p~~~~~l~~L~~l~l~~N~~~~~~p~~~~--~~~~---~~~~~~n~ 143 (557)
+|++ |++++..|..|..+++|+.|++++|++. .+|. +. ..+. .+.+++|+
T Consensus 86 ~l~~~n~l~~i~~~~f~~l~~L~~L~l~~n~l~-~lp~-~~~l~~L~~L~~L~l~~N~ 141 (239)
T 2xwt_C 86 EIRNTRNLTYIDPDALKELPLLKFLGIFNTGLK-MFPD-LTKVYSTDIFFILEITDNP 141 (239)
T ss_dssp EEEEETTCCEECTTSEECCTTCCEEEEEEECCC-SCCC-CTTCCBCCSEEEEEEESCT
T ss_pred ECCCCCCeeEcCHHHhCCCCCCCEEeCCCCCCc-cccc-cccccccccccEEECCCCc
Confidence 9999 9999555567889999999999999999 6887 22 2333 67778883
No 312
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=99.19 E-value=3.1e-11 Score=131.50 Aligned_cols=127 Identities=15% Similarity=0.056 Sum_probs=102.0
Q ss_pred CCCCCCCCC-CCCeEEeeC--------CCCCceEEEEecCCCccccCCccccCCCCCcEEECcCCCCCCCCC-CccCCCC
Q 008707 18 DRGDPCVPV-PWEWVTCST--------TTPPRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLP-DMSRLID 87 (557)
Q Consensus 18 ~~~~~c~~~-~~~~v~c~~--------~~p~~l~~L~L~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~-~~~~l~~ 87 (557)
|.+.+|... .+.-+.|+. ..|+.++.|+|++|.|++..|..|.++++|++|+|++|+|++..| .|.++++
T Consensus 3 ~~~~~C~~~~~~~~~~c~~~~l~~iP~~l~~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~ 82 (606)
T 3t6q_A 3 SSDQKCIEKEVNKTYNCENLGLNEIPGTLPNSTECLEFSFNVLPTIQNTTFSRLINLTFLDLTRCQIYWIHEDTFQSQHR 82 (606)
T ss_dssp ---CCCEEEETTTEEECTTSCCSSCCTTSCTTCCEEECTTCCCSEECTTTSTTCTTCSEEECTTCCCCEECTTTTTTCTT
T ss_pred cccCceecccCCceEECCCCCcccCcCCCCCcCcEEEccCCccCcCChhHhccCccceEEECCCCccceeChhhccCccc
Confidence 555566432 245677866 357889999999999998888899999999999999999999888 5999999
Q ss_pred CcEEEecCccccCcCCCccCCCCcccccccccccCCCCCC-ccc--ccCceeeeecCCCcc
Q 008707 88 LRIVHLENNELTGSLPSYMGSLPNLQELHIENNSFVGEIP-PAL--LTGKVIFKYDNNPKL 145 (557)
Q Consensus 88 L~~L~l~~N~l~~~~p~~~~~l~~L~~l~l~~N~~~~~~p-~~~--~~~~~~~~~~~n~~~ 145 (557)
|+.|+|++|++++..|..|+.+++|+.|++++|++. .++ ..+ ...+..+.+++|...
T Consensus 83 L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~i~-~l~~~~~~~l~~L~~L~L~~n~l~ 142 (606)
T 3t6q_A 83 LDTLVLTANPLIFMAETALSGPKALKHLFFIQTGIS-SIDFIPLHNQKTLESLYLGSNHIS 142 (606)
T ss_dssp CCEEECTTCCCSEECTTTTSSCTTCCEEECTTSCCS-CGGGSCCTTCTTCCEEECCSSCCC
T ss_pred cCeeeCCCCcccccChhhhcccccccEeeccccCcc-cCCcchhccCCcccEEECCCCccc
Confidence 999999999999888999999999999999999998 553 333 234566677777543
No 313
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=99.19 E-value=3.6e-11 Score=126.97 Aligned_cols=118 Identities=22% Similarity=0.245 Sum_probs=98.5
Q ss_pred CCCeEEeeC--------CCCCceEEEEecCCCccccCCccccCCCCCcEEECcCCCCCCCCC-CccCCCCCcEEEecCcc
Q 008707 27 PWEWVTCST--------TTPPRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLP-DMSRLIDLRIVHLENNE 97 (557)
Q Consensus 27 ~~~~v~c~~--------~~p~~l~~L~L~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~-~~~~l~~L~~L~l~~N~ 97 (557)
.|..|.|+. ..|++++.|+|++|+|++..|..|.++++|+.|+|++|.|++..| .|.++++|+.|+|++|+
T Consensus 12 ~~~~v~c~~~~l~~ip~~~~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~ 91 (477)
T 2id5_A 12 QDRAVLCHRKRFVAVPEGIPTETRLLDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNR 91 (477)
T ss_dssp TTTEEECCSCCCSSCCSCCCTTCSEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSC
T ss_pred CCCEEEeCCCCcCcCCCCCCCCCcEEECCCCccceECHhHccCCCCCCEEECCCCccCEeChhhhhCCccCCEEECCCCc
Confidence 467888876 347789999999999998778899999999999999999999987 69999999999999999
Q ss_pred ccCcCCCccCCCCcccccccccccCCCCCCcccc--cCceeeeecCCCc
Q 008707 98 LTGSLPSYMGSLPNLQELHIENNSFVGEIPPALL--TGKVIFKYDNNPK 144 (557)
Q Consensus 98 l~~~~p~~~~~l~~L~~l~l~~N~~~~~~p~~~~--~~~~~~~~~~n~~ 144 (557)
+++..+..|.++++|+.|++++|++.+..|..+. ..+..+.+.+|..
T Consensus 92 l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~l~~n~l 140 (477)
T 2id5_A 92 LKLIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDL 140 (477)
T ss_dssp CCSCCTTSSTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEEECCTTC
T ss_pred CCccCcccccCCCCCCEEECCCCccccCChhHccccccCCEEECCCCcc
Confidence 9944445678999999999999999944444443 3456677788764
No 314
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.18 E-value=6e-11 Score=116.31 Aligned_cols=115 Identities=21% Similarity=0.299 Sum_probs=94.3
Q ss_pred eEEeeC--------CCCCceEEEEecCCCccccCCccccCCCCCcEEECcCCCCCCCCC-CccCCCCCcEEEecCcc-cc
Q 008707 30 WVTCST--------TTPPRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLP-DMSRLIDLRIVHLENNE-LT 99 (557)
Q Consensus 30 ~v~c~~--------~~p~~l~~L~L~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~-~~~~l~~L~~L~l~~N~-l~ 99 (557)
-|.|+. ..|++++.|+|++|++++..+..|.++++|+.|+|++|.|++..| .|..+++|+.|+|++|. ++
T Consensus 15 ~~~c~~~~l~~ip~~~~~~l~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~l~ 94 (285)
T 1ozn_A 15 TTSCPQQGLQAVPVGIPAASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQLR 94 (285)
T ss_dssp EEECCSSCCSSCCTTCCTTCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSCTTCC
T ss_pred EEEcCcCCcccCCcCCCCCceEEEeeCCcCCccCHHHcccCCCCCEEECCCCccceeCHhhcCCccCCCEEeCCCCCCcc
Confidence 466765 347789999999999997666789999999999999999999877 69999999999999997 88
Q ss_pred CcCCCccCCCCcccccccccccCCCCCCcccc--cCceeeeecCCCc
Q 008707 100 GSLPSYMGSLPNLQELHIENNSFVGEIPPALL--TGKVIFKYDNNPK 144 (557)
Q Consensus 100 ~~~p~~~~~l~~L~~l~l~~N~~~~~~p~~~~--~~~~~~~~~~n~~ 144 (557)
...|..+..+++|+.|++++|++.+..|..+. ..+..+.+.+|..
T Consensus 95 ~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l 141 (285)
T 1ozn_A 95 SVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNAL 141 (285)
T ss_dssp CCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCC
T ss_pred ccCHHHhcCCcCCCEEECCCCcCCEECHhHhhCCcCCCEEECCCCcc
Confidence 55578899999999999999999943343332 3556677777764
No 315
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.18 E-value=3.2e-11 Score=109.36 Aligned_cols=90 Identities=22% Similarity=0.338 Sum_probs=79.0
Q ss_pred CCceEEEEecCCCccccCCccccCCCCCcEEECcCCCCCCCCCC-ccCCCCCcEEEecCccccCcCCCccCCCCcccccc
Q 008707 38 PPRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPD-MSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELH 116 (557)
Q Consensus 38 p~~l~~L~L~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~-~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~l~ 116 (557)
.++|+.|+|++|+|++..+..+.++++|+.|+|++|+|++.++. |..+++|+.|+|++|+|++..+..+..+++|+.|+
T Consensus 51 l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~ 130 (177)
T 2o6r_A 51 LTQLTKLSLSQNQIQSLPDGVFDKLTKLTILYLHENKLQSLPNGVFDKLTQLKELALDTNQLKSVPDGIFDRLTSLQKIW 130 (177)
T ss_dssp CTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEE
T ss_pred cccccEEECCCCcceEeChhHccCCCccCEEECCCCCccccCHHHhhCCcccCEEECcCCcceEeCHHHhcCCcccCEEE
Confidence 36899999999999955556689999999999999999999885 89999999999999999954444568899999999
Q ss_pred cccccCCCCCC
Q 008707 117 IENNSFVGEIP 127 (557)
Q Consensus 117 l~~N~~~~~~p 127 (557)
+++|++.+..|
T Consensus 131 l~~N~~~~~~~ 141 (177)
T 2o6r_A 131 LHTNPWDCSCP 141 (177)
T ss_dssp CCSSCBCCCHH
T ss_pred ecCCCeeccCc
Confidence 99999996665
No 316
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.18 E-value=6.5e-11 Score=115.32 Aligned_cols=106 Identities=23% Similarity=0.299 Sum_probs=73.8
Q ss_pred CCceEEEEecCCCccccCCccccCCCCCcEEECcCCCCCCCCCC-ccCCCCCcEEEecCccccCcCCCccCCCCcccccc
Q 008707 38 PPRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPD-MSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELH 116 (557)
Q Consensus 38 p~~l~~L~L~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~-~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~l~ 116 (557)
.++|+.|+|++|.+++..|..+.++++|+.|+|++|+|++.++. |..+++|+.|+|++|++++..|..+..+++|+.|+
T Consensus 84 l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 163 (272)
T 3rfs_A 84 LTNLTYLILTGNQLQSLPNGVFDKLTNLKELVLVENQLQSLPDGVFDKLTNLTYLNLAHNQLQSLPKGVFDKLTNLTELD 163 (272)
T ss_dssp CTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred CCCCCEEECCCCccCccChhHhcCCcCCCEEECCCCcCCccCHHHhccCCCCCEEECCCCccCccCHHHhccCccCCEEE
Confidence 35677777777777755555567777777777777777777764 67777777788877777755555567777778888
Q ss_pred cccccCCCCCCcccc---cCceeeeecCCCc
Q 008707 117 IENNSFVGEIPPALL---TGKVIFKYDNNPK 144 (557)
Q Consensus 117 l~~N~~~~~~p~~~~---~~~~~~~~~~n~~ 144 (557)
+++|+++ .+|+..+ ..+..+.+.+|..
T Consensus 164 l~~n~l~-~~~~~~~~~l~~L~~L~L~~N~l 193 (272)
T 3rfs_A 164 LSYNQLQ-SLPEGVFDKLTQLKDLRLYQNQL 193 (272)
T ss_dssp CCSSCCC-CCCTTTTTTCTTCCEEECCSSCC
T ss_pred CCCCCcC-ccCHHHhcCCccCCEEECCCCcC
Confidence 8888777 5555432 3455666666654
No 317
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=99.18 E-value=1.2e-11 Score=127.27 Aligned_cols=107 Identities=18% Similarity=0.210 Sum_probs=67.1
Q ss_pred CceEEEEecCCCccccCCccccCCCCCcEEECcCCCCCCCCCCccCCCCCcEEEecCccccCcCCCccCCCCcccccccc
Q 008707 39 PRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPDMSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELHIE 118 (557)
Q Consensus 39 ~~l~~L~L~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~l~l~ 118 (557)
++|+.|+|++|.+++..|..|.++++|+.|+|++|+|++.+..+..+++|+.|+|++|+++ .+|..+..+++|+.|+++
T Consensus 248 ~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~l~~L~~L~L~~n~l~-~~~~~~~~l~~L~~L~L~ 326 (390)
T 3o6n_A 248 PGLVEVDLSYNELEKIMYHPFVKMQRLERLYISNNRLVALNLYGQPIPTLKVLDLSHNHLL-HVERNQPQFDRLENLYLD 326 (390)
T ss_dssp TTCSEEECCSSCCCEEESGGGTTCSSCCEEECCSSCCCEEECSSSCCTTCCEEECCSSCCC-CCGGGHHHHTTCSEEECC
T ss_pred CCccEEECCCCcCCCcChhHccccccCCEEECCCCcCcccCcccCCCCCCCEEECCCCcce-ecCccccccCcCCEEECC
Confidence 4566666666666655566666666666666666666665545556666666666666666 555556666666666666
Q ss_pred cccCCCCCCcccccCceeeeecCCCcccc
Q 008707 119 NNSFVGEIPPALLTGKVIFKYDNNPKLHK 147 (557)
Q Consensus 119 ~N~~~~~~p~~~~~~~~~~~~~~n~~~~~ 147 (557)
+|++. .+|...+..+..+.+++|++.|+
T Consensus 327 ~N~i~-~~~~~~~~~L~~L~l~~N~~~~~ 354 (390)
T 3o6n_A 327 HNSIV-TLKLSTHHTLKNLTLSHNDWDCN 354 (390)
T ss_dssp SSCCC-CCCCCTTCCCSEEECCSSCEEHH
T ss_pred CCccc-eeCchhhccCCEEEcCCCCccch
Confidence 66666 55555555666667777776664
No 318
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=99.18 E-value=4.6e-11 Score=119.83 Aligned_cols=107 Identities=23% Similarity=0.304 Sum_probs=93.9
Q ss_pred CCceEEEEecCCCccccCCccccCCCCCcEEECcCCCCCCCCC-CccCCCCCcEEEecCccccCcCCCccCCCCcccccc
Q 008707 38 PPRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLP-DMSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELH 116 (557)
Q Consensus 38 p~~l~~L~L~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~-~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~l~ 116 (557)
+++|+.|+|++|.+++..|..+.++++|+.|+|++|+|++.++ .|..+++|+.|+|++|+++ .+|..+..+++|+.|+
T Consensus 191 ~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~L~~L~ 269 (330)
T 1xku_A 191 PPSLTELHLDGNKITKVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLNNNKLV-KVPGGLADHKYIQVVY 269 (330)
T ss_dssp CTTCSEEECTTSCCCEECTGGGTTCTTCCEEECCSSCCCEECTTTGGGSTTCCEEECCSSCCS-SCCTTTTTCSSCCEEE
T ss_pred cccCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCceeChhhccCCCCCCEEECCCCcCc-cCChhhccCCCcCEEE
Confidence 4689999999999998888899999999999999999999888 5999999999999999999 9999999999999999
Q ss_pred cccccCCCCCCccccc---------CceeeeecCCCccc
Q 008707 117 IENNSFVGEIPPALLT---------GKVIFKYDNNPKLH 146 (557)
Q Consensus 117 l~~N~~~~~~p~~~~~---------~~~~~~~~~n~~~~ 146 (557)
+++|+++ .+|...+. ....+.+.+||..+
T Consensus 270 l~~N~i~-~~~~~~f~~~~~~~~~~~l~~l~l~~N~~~~ 307 (330)
T 1xku_A 270 LHNNNIS-AIGSNDFCPPGYNTKKASYSGVSLFSNPVQY 307 (330)
T ss_dssp CCSSCCC-CCCTTSSSCSSCCTTSCCCSEEECCSSSSCG
T ss_pred CCCCcCC-ccChhhcCCcccccccccccceEeecCcccc
Confidence 9999999 77776553 23456788998764
No 319
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=99.17 E-value=4.3e-11 Score=131.11 Aligned_cols=106 Identities=16% Similarity=0.223 Sum_probs=97.0
Q ss_pred ceEEEEecCCCccccCCcccc--CCCCCcEEECcCCCCCCCCCCccCCCCCcEEEe------cCccccCcCCCccCCCCc
Q 008707 40 RITKIALSGKNLKGEIPPELK--NMEALTELWLDGNFLTGPLPDMSRLIDLRIVHL------ENNELTGSLPSYMGSLPN 111 (557)
Q Consensus 40 ~l~~L~L~~n~l~~~~p~~~~--~l~~L~~L~l~~N~l~~~~~~~~~l~~L~~L~l------~~N~l~~~~p~~~~~l~~ 111 (557)
+|+.|+|++|+|+ .+|..+. .+++|+.|+|++|+|++++..+.++++|+.|+| ++|++.+.+|..+..+++
T Consensus 489 ~L~~L~Ls~N~l~-~lp~~~~~~~l~~L~~L~Ls~N~l~~ip~~~~~l~~L~~L~Ls~N~~ls~N~l~~~~p~~l~~l~~ 567 (636)
T 4eco_A 489 LLTSIDLRFNKLT-KLSDDFRATTLPYLVGIDLSYNSFSKFPTQPLNSSTLKGFGIRNQRDAQGNRTLREWPEGITLCPS 567 (636)
T ss_dssp GCCEEECCSSCCC-BCCGGGSTTTCTTCCEEECCSSCCSSCCCGGGGCSSCCEEECCSCBCTTCCBCCCCCCTTGGGCSS
T ss_pred CccEEECcCCcCC-ccChhhhhccCCCcCEEECCCCCCCCcChhhhcCCCCCEEECCCCcccccCcccccChHHHhcCCC
Confidence 8999999999999 8999887 999999999999999995557999999999999 568888899999999999
Q ss_pred ccccccccccCCCCCCcccccCceeeeecCCCcccc
Q 008707 112 LQELHIENNSFVGEIPPALLTGKVIFKYDNNPKLHK 147 (557)
Q Consensus 112 L~~l~l~~N~~~~~~p~~~~~~~~~~~~~~n~~~~~ 147 (557)
|+.|++++|++. .+|..++..+..+.+++|+..|.
T Consensus 568 L~~L~Ls~N~l~-~ip~~~~~~L~~L~Ls~N~l~~~ 602 (636)
T 4eco_A 568 LTQLQIGSNDIR-KVNEKITPNISVLDIKDNPNISI 602 (636)
T ss_dssp CCEEECCSSCCC-BCCSCCCTTCCEEECCSCTTCEE
T ss_pred CCEEECCCCcCC-ccCHhHhCcCCEEECcCCCCccc
Confidence 999999999994 99999988889999999998873
No 320
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.16 E-value=6e-11 Score=124.00 Aligned_cols=115 Identities=19% Similarity=0.199 Sum_probs=97.3
Q ss_pred CCeEEeeC--------CCCCceEEEEecCCCccccCCccccCCCCCcEEECcCCCCCCCCC-CccCCCCCcEEEecCccc
Q 008707 28 WEWVTCST--------TTPPRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLP-DMSRLIDLRIVHLENNEL 98 (557)
Q Consensus 28 ~~~v~c~~--------~~p~~l~~L~L~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~-~~~~l~~L~~L~l~~N~l 98 (557)
|..|.|.. ..|++++.|+|++|+|++..+..|.++++|+.|+|++|+|+++.+ .|.++++|+.|+|++|+|
T Consensus 45 ~~~v~c~~~~l~~iP~~~~~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l 124 (440)
T 3zyj_A 45 FSKVICVRKNLREVPDGISTNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELFDNRL 124 (440)
T ss_dssp SCEEECCSCCCSSCCSCCCTTCSEEECCSCCCCEECTTTTSSCSSCCEEECCSSCCCEECGGGGTTCSSCCEEECCSSCC
T ss_pred CCEEEeCCCCcCcCCCCCCCCCcEEEccCCcCCeeCHHHhhCCCCCCEEECCCCcCCccChhhccCCccCCEEECCCCcC
Confidence 56788876 346789999999999997788899999999999999999999887 599999999999999999
Q ss_pred cCcCCCccCCCCcccccccccccCCCCCCccccc---CceeeeecCCC
Q 008707 99 TGSLPSYMGSLPNLQELHIENNSFVGEIPPALLT---GKVIFKYDNNP 143 (557)
Q Consensus 99 ~~~~p~~~~~l~~L~~l~l~~N~~~~~~p~~~~~---~~~~~~~~~n~ 143 (557)
+...+..|..+++|+.|++++|++. .+|...+. .+..+.+.+|.
T Consensus 125 ~~~~~~~~~~l~~L~~L~L~~N~i~-~~~~~~~~~l~~L~~L~l~~~~ 171 (440)
T 3zyj_A 125 TTIPNGAFVYLSKLKELWLRNNPIE-SIPSYAFNRIPSLRRLDLGELK 171 (440)
T ss_dssp SSCCTTTSCSCSSCCEEECCSCCCC-EECTTTTTTCTTCCEEECCCCT
T ss_pred CeeCHhHhhccccCceeeCCCCccc-ccCHHHhhhCcccCEeCCCCCC
Confidence 9555557899999999999999998 77776554 44556666654
No 321
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.16 E-value=3.6e-11 Score=108.99 Aligned_cols=103 Identities=22% Similarity=0.255 Sum_probs=83.5
Q ss_pred CCceEEEEecCCCccccCCccccCCC-CCcEEECcCCCCCCCCCCccCCCCCcEEEecCccccCcCCCc-cCCCCccccc
Q 008707 38 PPRITKIALSGKNLKGEIPPELKNME-ALTELWLDGNFLTGPLPDMSRLIDLRIVHLENNELTGSLPSY-MGSLPNLQEL 115 (557)
Q Consensus 38 p~~l~~L~L~~n~l~~~~p~~~~~l~-~L~~L~l~~N~l~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~-~~~l~~L~~l 115 (557)
+.+|+.|+|++|+++ .+|. +..+. +|+.|+|++|.|++. +.|..+++|+.|+|++|+|+ .+|.. +..+++|+.|
T Consensus 18 ~~~L~~L~l~~n~l~-~i~~-~~~~~~~L~~L~Ls~N~l~~~-~~l~~l~~L~~L~Ls~N~l~-~~~~~~~~~l~~L~~L 93 (176)
T 1a9n_A 18 AVRDRELDLRGYKIP-VIEN-LGATLDQFDAIDFSDNEIRKL-DGFPLLRRLKTLLVNNNRIC-RIGEGLDQALPDLTEL 93 (176)
T ss_dssp TTSCEEEECTTSCCC-SCCC-GGGGTTCCSEEECCSSCCCEE-CCCCCCSSCCEEECCSSCCC-EECSCHHHHCTTCCEE
T ss_pred cCCceEEEeeCCCCc-hhHH-hhhcCCCCCEEECCCCCCCcc-cccccCCCCCEEECCCCccc-ccCcchhhcCCCCCEE
Confidence 467999999999999 6664 55554 999999999999987 77999999999999999999 55644 4889999999
Q ss_pred ccccccCCCCCCc--ccc--cCceeeeecCCCcc
Q 008707 116 HIENNSFVGEIPP--ALL--TGKVIFKYDNNPKL 145 (557)
Q Consensus 116 ~l~~N~~~~~~p~--~~~--~~~~~~~~~~n~~~ 145 (557)
++++|++. .+|. .+. ..+..+.+++|+..
T Consensus 94 ~L~~N~i~-~~~~~~~l~~l~~L~~L~l~~N~i~ 126 (176)
T 1a9n_A 94 ILTNNSLV-ELGDLDPLASLKSLTYLCILRNPVT 126 (176)
T ss_dssp ECCSCCCC-CGGGGGGGGGCTTCCEEECCSSGGG
T ss_pred ECCCCcCC-cchhhHhhhcCCCCCEEEecCCCCC
Confidence 99999997 7886 332 34567788888754
No 322
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=99.16 E-value=5.7e-11 Score=119.13 Aligned_cols=116 Identities=24% Similarity=0.409 Sum_probs=97.1
Q ss_pred CCCCCeEEeeC--------CCCCceEEEEecCCCccccCCccccCCCCCcEEECcCCCCCCCCC-CccCCCCCcEEEecC
Q 008707 25 PVPWEWVTCST--------TTPPRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLP-DMSRLIDLRIVHLEN 95 (557)
Q Consensus 25 ~~~~~~v~c~~--------~~p~~l~~L~L~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~-~~~~l~~L~~L~l~~ 95 (557)
.|.|+.+.|+. ..|+.++.|+|++|++++..+..|.++++|++|+|++|+|++..| .|..+++|+.|+|++
T Consensus 30 ~c~l~~l~~~~~~l~~lp~~~~~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~ 109 (330)
T 1xku_A 30 QCHLRVVQCSDLGLEKVPKDLPPDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLSK 109 (330)
T ss_dssp EEETTEEECTTSCCCSCCCSCCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCS
T ss_pred cCCCeEEEecCCCccccCccCCCCCeEEECCCCcCCEeChhhhccCCCCCEEECCCCcCCeeCHHHhcCCCCCCEEECCC
Confidence 56899999975 246789999999999996666689999999999999999999977 699999999999999
Q ss_pred ccccCcCCCccCCCCcccccccccccCCCCCCcccc---cCceeeeecCCCc
Q 008707 96 NELTGSLPSYMGSLPNLQELHIENNSFVGEIPPALL---TGKVIFKYDNNPK 144 (557)
Q Consensus 96 N~l~~~~p~~~~~l~~L~~l~l~~N~~~~~~p~~~~---~~~~~~~~~~n~~ 144 (557)
|+++ .+|..+. ++|+.|++++|++. .++...+ ..+..+.+.+|..
T Consensus 110 n~l~-~l~~~~~--~~L~~L~l~~n~l~-~~~~~~~~~l~~L~~L~l~~n~l 157 (330)
T 1xku_A 110 NQLK-ELPEKMP--KTLQELRVHENEIT-KVRKSVFNGLNQMIVVELGTNPL 157 (330)
T ss_dssp SCCS-BCCSSCC--TTCCEEECCSSCCC-BBCHHHHTTCTTCCEEECCSSCC
T ss_pred CcCC-ccChhhc--ccccEEECCCCccc-ccCHhHhcCCccccEEECCCCcC
Confidence 9999 8888765 79999999999998 6665443 3456667777764
No 323
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.16 E-value=1.6e-11 Score=133.51 Aligned_cols=107 Identities=18% Similarity=0.210 Sum_probs=67.1
Q ss_pred CceEEEEecCCCccccCCccccCCCCCcEEECcCCCCCCCCCCccCCCCCcEEEecCccccCcCCCccCCCCcccccccc
Q 008707 39 PRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPDMSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELHIE 118 (557)
Q Consensus 39 ~~l~~L~L~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~l~l~ 118 (557)
++|+.|+|++|.+++.+|..|.++++|+.|+|++|+|+++++.+..+++|+.|+|++|.++ .+|..+..+++|+.|+++
T Consensus 254 ~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~l~~L~~L~Ls~N~l~-~i~~~~~~l~~L~~L~L~ 332 (597)
T 3oja_B 254 PGLVEVDLSYNELEKIMYHPFVKMQRLERLYISNNRLVALNLYGQPIPTLKVLDLSHNHLL-HVERNQPQFDRLENLYLD 332 (597)
T ss_dssp TTCSEEECCSSCCCEEESGGGTTCSSCCEEECTTSCCCEEECSSSCCTTCCEEECCSSCCC-CCGGGHHHHTTCSEEECC
T ss_pred CCCCEEECCCCccCCCCHHHhcCccCCCEEECCCCCCCCCCcccccCCCCcEEECCCCCCC-ccCcccccCCCCCEEECC
Confidence 4556666666666655566666666666666666666665445555666666666666666 566556666666666666
Q ss_pred cccCCCCCCcccccCceeeeecCCCcccc
Q 008707 119 NNSFVGEIPPALLTGKVIFKYDNNPKLHK 147 (557)
Q Consensus 119 ~N~~~~~~p~~~~~~~~~~~~~~n~~~~~ 147 (557)
+|++. .+|...+..+..+.+++|++.|.
T Consensus 333 ~N~l~-~~~~~~~~~L~~L~l~~N~~~~~ 360 (597)
T 3oja_B 333 HNSIV-TLKLSTHHTLKNLTLSHNDWDCN 360 (597)
T ss_dssp SSCCC-CCCCCTTCCCSEEECCSSCEEHH
T ss_pred CCCCC-CcChhhcCCCCEEEeeCCCCCCh
Confidence 66665 55555555666667777776664
No 324
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.15 E-value=1.6e-11 Score=121.70 Aligned_cols=118 Identities=17% Similarity=0.311 Sum_probs=96.6
Q ss_pred CCCCCCCCeEEeeC--------CCCCceEEEEecCCCccccCCc-cccCCCCCcEEECcCCCCCCC---CCCccCCCCCc
Q 008707 22 PCVPVPWEWVTCST--------TTPPRITKIALSGKNLKGEIPP-ELKNMEALTELWLDGNFLTGP---LPDMSRLIDLR 89 (557)
Q Consensus 22 ~c~~~~~~~v~c~~--------~~p~~l~~L~L~~n~l~~~~p~-~~~~l~~L~~L~l~~N~l~~~---~~~~~~l~~L~ 89 (557)
+| .|.|++|+|+. ..|++++.|+|++|+++ .+|. .|.++++|+.|+|++|+|+.. ++.+..+++|+
T Consensus 4 ~C-~C~~~~l~c~~~~l~~ip~~~~~~l~~L~L~~n~l~-~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L~ 81 (306)
T 2z66_A 4 RC-SCSGTEIRCNSKGLTSVPTGIPSSATRLELESNKLQ-SLPHGVFDKLTQLTKLSLSSNGLSFKGCCSQSDFGTTSLK 81 (306)
T ss_dssp TC-EEETTEEECCSSCCSSCCSCCCTTCCEEECCSSCCC-CCCTTTTTTCTTCSEEECCSSCCCEEEEEEHHHHSCSCCC
T ss_pred CC-eeCCCEEEcCCCCcccCCCCCCCCCCEEECCCCccC-ccCHhHhhccccCCEEECCCCccCcccCcccccccccccC
Confidence 45 57899999987 24678999999999999 6665 478999999999999999865 23577899999
Q ss_pred EEEecCccccCcCCCccCCCCcccccccccccCCCCCCc-ccc---cCceeeeecCCC
Q 008707 90 IVHLENNELTGSLPSYMGSLPNLQELHIENNSFVGEIPP-ALL---TGKVIFKYDNNP 143 (557)
Q Consensus 90 ~L~l~~N~l~~~~p~~~~~l~~L~~l~l~~N~~~~~~p~-~~~---~~~~~~~~~~n~ 143 (557)
.|+|++|.++ .+|..+..+++|+.|++++|++. .+|. ..+ ..+..+.+++|.
T Consensus 82 ~L~Ls~n~i~-~l~~~~~~l~~L~~L~l~~n~l~-~~~~~~~~~~l~~L~~L~l~~n~ 137 (306)
T 2z66_A 82 YLDLSFNGVI-TMSSNFLGLEQLEHLDFQHSNLK-QMSEFSVFLSLRNLIYLDISHTH 137 (306)
T ss_dssp EEECCSCSEE-EEEEEEETCTTCCEEECTTSEEE-SSTTTTTTTTCTTCCEEECTTSC
T ss_pred EEECCCCccc-cChhhcCCCCCCCEEECCCCccc-ccccchhhhhccCCCEEECCCCc
Confidence 9999999999 78888889999999999999998 5554 332 345666777775
No 325
>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6
Probab=99.15 E-value=1.1e-10 Score=112.66 Aligned_cols=131 Identities=17% Similarity=0.086 Sum_probs=98.1
Q ss_pred ccC-CCCceEEEEEEEcCCcEEEEEEccCccchhHHHHHHHHHHHhhcCCCC--ccceeeEEEecCeeEEEEEecCCCCh
Q 008707 242 KIG-KGSFGSVYYGKMKDGKEVAVKIMADSCSHRTQQFVTEVALLSRIHHRN--LVPLIGYCEEEHQRILVYEYMHNGTL 318 (557)
Q Consensus 242 ~lG-~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~il~~l~h~n--Iv~~~~~~~~~~~~~lv~e~~~~gsL 318 (557)
.++ .|..+.||++...+|+.+++|+.... ....+.+|+++++.+.+.+ +.+++++...++..++||||++|.++
T Consensus 26 ~~~~gg~~~~v~~~~~~~g~~~vlK~~~~~---~~~~~~~E~~~l~~l~~~~~~vP~~~~~~~~~~~~~~v~e~i~G~~l 102 (264)
T 1nd4_A 26 QQTIGCSDAAVFRLSAQGRPVLFVKTDLSG---ALNELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLLLGEVPGQDL 102 (264)
T ss_dssp ECSCTTSSCEEEEEECTTSCCEEEEEECSC---TTSCHHHHHHHHHHHHTTTCCBCCEEEEEECSSCEEEEEECCSSEET
T ss_pred ecccCCCCceEEEEecCCCCeEEEEeCCcc---cchhhhHHHHHHHHHHhCCCCCCeEEEeccCCCCCEEEEEecCCccc
Confidence 344 56669999998777888999987643 2245778999999996444 56688888887889999999999888
Q ss_pred hhhhhccCCCCCcCHHHHHHHHHHHHHHHHHHHcCC--------------------------------------------
Q 008707 319 RDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGC-------------------------------------------- 354 (557)
Q Consensus 319 ~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~-------------------------------------------- 354 (557)
. ... .. ...++.++++.|+.||+..
T Consensus 103 ~--~~~------~~---~~~~~~~l~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (264)
T 1nd4_A 103 L--SSH------LA---PAEKVSIMADAMRRLHTLDPATCPFDHQAKHRIERARTRMEAGLVDQDDLDEEHQGLAPAELF 171 (264)
T ss_dssp T--TSC------CC---HHHHHHHHHHHHHHHTTSCGGGCCCBCCHHHHHHHHHHHHHTTCCCTTSCCGGGTTCCHHHHH
T ss_pred C--cCc------CC---HhHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhcCCccchhhhhhccCccHHHHH
Confidence 4 221 11 2357788888888888621
Q ss_pred -----------CCCeEeeccCCCCEEeCCCCcEEEecccCccc
Q 008707 355 -----------NPGIIHRDVKSSNILLDINMRAKVSDFGLSRQ 386 (557)
Q Consensus 355 -----------~~~ivH~dlk~~NIll~~~~~~kl~Dfgla~~ 386 (557)
...++|||++|.||++++++.+.|+||+.+..
T Consensus 172 ~~l~~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~liD~~~a~~ 214 (264)
T 1nd4_A 172 ARLKARMPDGEDLVVTHGDACLPNIMVENGRFSGFIDCGRLGV 214 (264)
T ss_dssp HHHHHTCCSSCCEEEECSSCCGGGEEEETTEEEEECCCTTCEE
T ss_pred HHHHHhcCCCCCeEEECCCCCCCcEEEECCcEEEEEcchhccc
Confidence 01299999999999998766667999998653
No 326
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.15 E-value=3.2e-11 Score=133.79 Aligned_cols=104 Identities=27% Similarity=0.366 Sum_probs=91.4
Q ss_pred CceEEEEecCCCccccCCccccCCCCCcEEECcCCCCCCCCCCccCCCCCcEEEecCccccCcCCCccCCCCcccccccc
Q 008707 39 PRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPDMSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELHIE 118 (557)
Q Consensus 39 ~~l~~L~L~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~l~l~ 118 (557)
+.|+.|+|++|.+. .+|..+.+|++|+.|+|++|.|+.+++.|.+|++|+.|+|++|+|+ .+|..|+.|++|+.|+|+
T Consensus 224 ~~L~~L~Ls~n~l~-~l~~~~~~l~~L~~L~Ls~N~l~~lp~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~ 301 (727)
T 4b8c_D 224 QLWHALDLSNLQIF-NISANIFKYDFLTRLYLNGNSLTELPAEIKNLSNLRVLDLSHNRLT-SLPAELGSCFQLKYFYFF 301 (727)
T ss_dssp CCCCEEECTTSCCS-CCCGGGGGCCSCSCCBCTTSCCSCCCGGGGGGTTCCEEECTTSCCS-SCCSSGGGGTTCSEEECC
T ss_pred CCCcEEECCCCCCC-CCChhhcCCCCCCEEEeeCCcCcccChhhhCCCCCCEEeCcCCcCC-ccChhhcCCCCCCEEECC
Confidence 56889999999999 8998888999999999999999955557999999999999999999 889999999999999999
Q ss_pred cccCCCCCCccccc--CceeeeecCCCcc
Q 008707 119 NNSFVGEIPPALLT--GKVIFKYDNNPKL 145 (557)
Q Consensus 119 ~N~~~~~~p~~~~~--~~~~~~~~~n~~~ 145 (557)
+|.|. .||..+.. .+..+.+++|+..
T Consensus 302 ~N~l~-~lp~~~~~l~~L~~L~L~~N~l~ 329 (727)
T 4b8c_D 302 DNMVT-TLPWEFGNLCNLQFLGVEGNPLE 329 (727)
T ss_dssp SSCCC-CCCSSTTSCTTCCCEECTTSCCC
T ss_pred CCCCC-ccChhhhcCCCccEEeCCCCccC
Confidence 99998 89987643 5667788888754
No 327
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.14 E-value=5e-11 Score=110.15 Aligned_cols=83 Identities=19% Similarity=0.359 Sum_probs=39.5
Q ss_pred CceEEEEecCCCccccCCccccCCCCCcEEECcCCCCCCCCC-CccCCCCCcEEEecCcc-ccCcCCCccCCCCcccccc
Q 008707 39 PRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLP-DMSRLIDLRIVHLENNE-LTGSLPSYMGSLPNLQELH 116 (557)
Q Consensus 39 ~~l~~L~L~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~-~~~~l~~L~~L~l~~N~-l~~~~p~~~~~l~~L~~l~ 116 (557)
++|+.|+|++|.+++..|..+..+++|+.|+|++|++++..+ .+..+++|+.|+|++|. ++ .+| .+..+++|+.|+
T Consensus 88 ~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~Ls~n~i~~~~~~~l~~l~~L~~L~L~~n~~i~-~~~-~l~~l~~L~~L~ 165 (197)
T 4ezg_A 88 SNLERLRIMGKDVTSDKIPNLSGLTSLTLLDISHSAHDDSILTKINTLPKVNSIDLSYNGAIT-DIM-PLKTLPELKSLN 165 (197)
T ss_dssp TTCCEEEEECTTCBGGGSCCCTTCTTCCEEECCSSBCBGGGHHHHTTCSSCCEEECCSCTBCC-CCG-GGGGCSSCCEEE
T ss_pred CCCCEEEeECCccCcccChhhcCCCCCCEEEecCCccCcHhHHHHhhCCCCCEEEccCCCCcc-ccH-hhcCCCCCCEEE
Confidence 344455555555544444444445555555555555544333 34444555555555554 33 343 344444555555
Q ss_pred cccccCC
Q 008707 117 IENNSFV 123 (557)
Q Consensus 117 l~~N~~~ 123 (557)
+++|+++
T Consensus 166 l~~n~i~ 172 (197)
T 4ezg_A 166 IQFDGVH 172 (197)
T ss_dssp CTTBCCC
T ss_pred CCCCCCc
Confidence 5555544
No 328
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.14 E-value=6.7e-11 Score=119.74 Aligned_cols=107 Identities=20% Similarity=0.201 Sum_probs=90.2
Q ss_pred CCCCCCCeEEeeC--------CCCCceEEEEecCCCccccCC-ccccCCCCCcEEECcCCCCCCCCC--CccCCCCCcE-
Q 008707 23 CVPVPWEWVTCST--------TTPPRITKIALSGKNLKGEIP-PELKNMEALTELWLDGNFLTGPLP--DMSRLIDLRI- 90 (557)
Q Consensus 23 c~~~~~~~v~c~~--------~~p~~l~~L~L~~n~l~~~~p-~~~~~l~~L~~L~l~~N~l~~~~~--~~~~l~~L~~- 90 (557)
.|.|.|+.|.|+. +.|++++.|+|++|+|+ .+| ..|.+|++|+.|+|++|++.+.+| .|.++++|+.
T Consensus 6 ~C~C~~~~v~C~~~~Lt~iP~~l~~~l~~L~Ls~N~i~-~i~~~~f~~l~~L~~L~Ls~N~i~~~i~~~~f~~L~~l~~~ 84 (350)
T 4ay9_X 6 ICHCSNRVFLCQESKVTEIPSDLPRNAIELRFVLTKLR-VIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEI 84 (350)
T ss_dssp SSEEETTEEEEESTTCCSCCTTCCTTCSEEEEESCCCS-EECTTSSTTCTTCCEEEEECCTTCCEECTTSBCSCTTCCEE
T ss_pred ccEeeCCEEEecCCCCCccCcCcCCCCCEEEccCCcCC-CcCHHHHcCCCCCCEEECcCCCCCCccChhHhhcchhhhhh
Confidence 3568899999986 34678999999999999 565 579999999999999999988766 4899998775
Q ss_pred EEecCccccCcCCCccCCCCcccccccccccCCCCCCcccc
Q 008707 91 VHLENNELTGSLPSYMGSLPNLQELHIENNSFVGEIPPALL 131 (557)
Q Consensus 91 L~l~~N~l~~~~p~~~~~l~~L~~l~l~~N~~~~~~p~~~~ 131 (557)
+.+++|+|+...|..|..+++|+.|++++|++. .+|+..+
T Consensus 85 l~~~~N~l~~l~~~~f~~l~~L~~L~l~~n~l~-~~~~~~~ 124 (350)
T 4ay9_X 85 RIEKANNLLYINPEAFQNLPNLQYLLISNTGIK-HLPDVHK 124 (350)
T ss_dssp EEEEETTCCEECTTSBCCCTTCCEEEEEEECCS-SCCCCTT
T ss_pred hcccCCcccccCchhhhhccccccccccccccc-cCCchhh
Confidence 677789999666778999999999999999998 6776543
No 329
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.14 E-value=4.5e-11 Score=128.57 Aligned_cols=101 Identities=25% Similarity=0.321 Sum_probs=68.5
Q ss_pred ceEEEEecCCCccccCCccccCCCCCcEEECcCCCCCCCCCCccCCCCCcEEEecCccccCcCCCccCCCCccccccccc
Q 008707 40 RITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPDMSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELHIEN 119 (557)
Q Consensus 40 ~l~~L~L~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~l~l~~ 119 (557)
.|+.|+|++|+|+ .+|. +++|++|+.|+|++|+|+.+++.|+++++|+.|+|++|+|+ .+| .++.+++|+.|++++
T Consensus 442 ~L~~L~Ls~n~l~-~lp~-~~~l~~L~~L~Ls~N~l~~lp~~~~~l~~L~~L~Ls~N~l~-~lp-~l~~l~~L~~L~Ls~ 517 (567)
T 1dce_A 442 DVRVLHLAHKDLT-VLCH-LEQLLLVTHLDLSHNRLRALPPALAALRCLEVLQASDNALE-NVD-GVANLPRLQELLLCN 517 (567)
T ss_dssp TCSEEECTTSCCS-SCCC-GGGGTTCCEEECCSSCCCCCCGGGGGCTTCCEEECCSSCCC-CCG-GGTTCSSCCEEECCS
T ss_pred CceEEEecCCCCC-CCcC-ccccccCcEeecCcccccccchhhhcCCCCCEEECCCCCCC-CCc-ccCCCCCCcEEECCC
Confidence 4667777777777 4665 77777777777777777754446777777777777777777 366 677777777777777
Q ss_pred ccCCCCC-Ccccc--cCceeeeecCCCc
Q 008707 120 NSFVGEI-PPALL--TGKVIFKYDNNPK 144 (557)
Q Consensus 120 N~~~~~~-p~~~~--~~~~~~~~~~n~~ 144 (557)
|+|++.. |..+. ..+..+.+++|+.
T Consensus 518 N~l~~~~~p~~l~~l~~L~~L~L~~N~l 545 (567)
T 1dce_A 518 NRLQQSAAIQPLVSCPRLVLLNLQGNSL 545 (567)
T ss_dssp SCCCSSSTTGGGGGCTTCCEEECTTSGG
T ss_pred CCCCCCCCcHHHhcCCCCCEEEecCCcC
Confidence 7777433 55543 3455666677664
No 330
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=99.13 E-value=8.2e-11 Score=132.06 Aligned_cols=105 Identities=17% Similarity=0.282 Sum_probs=94.8
Q ss_pred ceEEEEecCCCccccCCcccc--CCCCCcEEECcCCCCCCCCCCccCCCCCcEEEecC------ccccCcCCCccCCCCc
Q 008707 40 RITKIALSGKNLKGEIPPELK--NMEALTELWLDGNFLTGPLPDMSRLIDLRIVHLEN------NELTGSLPSYMGSLPN 111 (557)
Q Consensus 40 ~l~~L~L~~n~l~~~~p~~~~--~l~~L~~L~l~~N~l~~~~~~~~~l~~L~~L~l~~------N~l~~~~p~~~~~l~~ 111 (557)
+|+.|+|++|+|+ .+|..+. .+++|+.|+|++|+|++++..+.++++|+.|+|++ |++.+.+|..+..+++
T Consensus 729 ~L~~L~Ls~N~L~-~lp~~l~~~~l~~L~~L~Ls~N~L~~lp~~l~~L~~L~~L~Ls~N~~ls~N~l~~~ip~~l~~L~~ 807 (876)
T 4ecn_A 729 LLTTIDLRFNKLT-SLSDDFRATTLPYLSNMDVSYNCFSSFPTQPLNSSQLKAFGIRHQRDAEGNRILRQWPTGITTCPS 807 (876)
T ss_dssp GCCEEECCSSCCC-CCCGGGSTTTCTTCCEEECCSSCCSSCCCGGGGCTTCCEEECCCCBCTTCCBCCCCCCTTGGGCSS
T ss_pred CccEEECCCCCCc-cchHHhhhccCCCcCEEEeCCCCCCccchhhhcCCCCCEEECCCCCCcccccccccChHHHhcCCC
Confidence 7999999999999 8998887 89999999999999999655799999999999976 8888899999999999
Q ss_pred ccccccccccCCCCCCcccccCceeeeecCCCccc
Q 008707 112 LQELHIENNSFVGEIPPALLTGKVIFKYDNNPKLH 146 (557)
Q Consensus 112 L~~l~l~~N~~~~~~p~~~~~~~~~~~~~~n~~~~ 146 (557)
|+.|++++|++ +.+|..++..+..+.+++|+...
T Consensus 808 L~~L~Ls~N~L-~~Ip~~l~~~L~~LdLs~N~l~~ 841 (876)
T 4ecn_A 808 LIQLQIGSNDI-RKVDEKLTPQLYILDIADNPNIS 841 (876)
T ss_dssp CCEEECCSSCC-CBCCSCCCSSSCEEECCSCTTCE
T ss_pred CCEEECCCCCC-CccCHhhcCCCCEEECCCCCCCc
Confidence 99999999999 59999988888889999998664
No 331
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=99.13 E-value=5e-11 Score=125.90 Aligned_cols=108 Identities=19% Similarity=0.241 Sum_probs=96.5
Q ss_pred CceEEEEecCCCccccCC-ccccCCCCCcEEECcCCCCCCCCC-CccCCCCCcEEEecCccccCcCCCccCCCCcccccc
Q 008707 39 PRITKIALSGKNLKGEIP-PELKNMEALTELWLDGNFLTGPLP-DMSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELH 116 (557)
Q Consensus 39 ~~l~~L~L~~n~l~~~~p-~~~~~l~~L~~L~l~~N~l~~~~~-~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~l~ 116 (557)
.+|+.|+|++|+++ .+| ..+.++++|+.|+|++|+|++.++ .|..+++|+.|+|++|++++..|..|..+++|+.|+
T Consensus 224 ~~L~~L~l~~n~l~-~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 302 (477)
T 2id5_A 224 LNLTSLSITHCNLT-AVPYLAVRHLVYLRFLNLSYNPISTIEGSMLHELLRLQEIQLVGGQLAVVEPYAFRGLNYLRVLN 302 (477)
T ss_dssp CCCSEEEEESSCCC-SCCHHHHTTCTTCCEEECCSSCCCEECTTSCTTCTTCCEEECCSSCCSEECTTTBTTCTTCCEEE
T ss_pred ccccEEECcCCccc-ccCHHHhcCccccCeeECCCCcCCccChhhccccccCCEEECCCCccceECHHHhcCcccCCEEE
Confidence 37899999999999 566 578999999999999999999888 599999999999999999988899999999999999
Q ss_pred cccccCCCCCCccccc---CceeeeecCCCccccc
Q 008707 117 IENNSFVGEIPPALLT---GKVIFKYDNNPKLHKE 148 (557)
Q Consensus 117 l~~N~~~~~~p~~~~~---~~~~~~~~~n~~~~~~ 148 (557)
+++|+++ .+|...+. .+..+.+++|++.|++
T Consensus 303 L~~N~l~-~~~~~~~~~l~~L~~L~l~~N~l~c~c 336 (477)
T 2id5_A 303 VSGNQLT-TLEESVFHSVGNLETLILDSNPLACDC 336 (477)
T ss_dssp CCSSCCS-CCCGGGBSCGGGCCEEECCSSCEECSG
T ss_pred CCCCcCc-eeCHhHcCCCcccCEEEccCCCccCcc
Confidence 9999999 78877654 4567899999999975
No 332
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.12 E-value=3e-11 Score=109.54 Aligned_cols=88 Identities=22% Similarity=0.190 Sum_probs=79.9
Q ss_pred CCceEEEEecCCCccccCCccccCCCCCcEEECcCCCCCCCCCC-ccCCCCCcEEEecCccccCcCCC--ccCCCCcccc
Q 008707 38 PPRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPD-MSRLIDLRIVHLENNELTGSLPS--YMGSLPNLQE 114 (557)
Q Consensus 38 p~~l~~L~L~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~-~~~l~~L~~L~l~~N~l~~~~p~--~~~~l~~L~~ 114 (557)
.++|+.|+|++|.|++. ..+..+++|+.|+|++|+|++.++. |..+++|+.|+|++|+|+ .+|. .+..+++|+.
T Consensus 41 ~~~L~~L~Ls~N~l~~~--~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~i~-~~~~~~~l~~l~~L~~ 117 (176)
T 1a9n_A 41 LDQFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNNNRICRIGEGLDQALPDLTELILTNNSLV-ELGDLDPLASLKSLTY 117 (176)
T ss_dssp TTCCSEEECCSSCCCEE--CCCCCCSSCCEEECCSSCCCEECSCHHHHCTTCCEEECCSCCCC-CGGGGGGGGGCTTCCE
T ss_pred CCCCCEEECCCCCCCcc--cccccCCCCCEEECCCCcccccCcchhhcCCCCCEEECCCCcCC-cchhhHhhhcCCCCCE
Confidence 35899999999999954 6799999999999999999998776 599999999999999997 7887 7889999999
Q ss_pred cccccccCCCCCCcc
Q 008707 115 LHIENNSFVGEIPPA 129 (557)
Q Consensus 115 l~l~~N~~~~~~p~~ 129 (557)
|++++|.+. .+|..
T Consensus 118 L~l~~N~i~-~~~~~ 131 (176)
T 1a9n_A 118 LCILRNPVT-NKKHY 131 (176)
T ss_dssp EECCSSGGG-GSTTH
T ss_pred EEecCCCCC-CcHhH
Confidence 999999998 78874
No 333
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.12 E-value=5.4e-11 Score=106.87 Aligned_cols=102 Identities=18% Similarity=0.222 Sum_probs=82.5
Q ss_pred CceEEEEecCCCccccCCccccCCCCCcEEECcCCCCCCCCCC-ccCCCCCcEEEecCccccCcCC--CccCCCCccccc
Q 008707 39 PRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPD-MSRLIDLRIVHLENNELTGSLP--SYMGSLPNLQEL 115 (557)
Q Consensus 39 ~~l~~L~L~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~-~~~l~~L~~L~l~~N~l~~~~p--~~~~~l~~L~~l 115 (557)
++|+.|+|++|.+++. ..+..+++|+.|+|++|+|++.+|. +..+++|+.|+|++|+|+ .+| ..+..+++|+.|
T Consensus 49 ~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~-~~~~~~~l~~l~~L~~L 125 (168)
T 2ell_A 49 VNLEFLSLINVGLISV--SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTHLNLSGNKLK-DISTLEPLKKLECLKSL 125 (168)
T ss_dssp GGCCEEEEESSCCCCC--SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCCEEECBSSSCC-SSGGGGGGSSCSCCCEE
T ss_pred CCCCEEeCcCCCCCCh--hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCCEEeccCCccC-cchhHHHHhcCCCCCEE
Confidence 6799999999999954 7788999999999999999997775 667999999999999999 554 678899999999
Q ss_pred ccccccCCCCCCc---ccc---cCceeeeecCCCc
Q 008707 116 HIENNSFVGEIPP---ALL---TGKVIFKYDNNPK 144 (557)
Q Consensus 116 ~l~~N~~~~~~p~---~~~---~~~~~~~~~~n~~ 144 (557)
++++|++. .+|. ..+ ..+..+.+.+|+.
T Consensus 126 ~l~~N~l~-~~~~~~~~~~~~l~~L~~L~l~~n~~ 159 (168)
T 2ell_A 126 DLFNCEVT-NLNDYRESVFKLLPQLTYLDGYDRED 159 (168)
T ss_dssp ECCSSGGG-TSTTHHHHHHTTCSSCCEETTEETTS
T ss_pred EeeCCcCc-chHHHHHHHHHhCccCcEecCCCCCh
Confidence 99999998 6665 222 2344555555543
No 334
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=99.12 E-value=1.1e-10 Score=126.02 Aligned_cols=119 Identities=18% Similarity=0.199 Sum_probs=94.5
Q ss_pred CCCCC-CCCeEEeeC--------CCCCceEEEEecCCCccccCCccccCCCCCcEEECcCCCCCCCCC-CccCCCCCcEE
Q 008707 22 PCVPV-PWEWVTCST--------TTPPRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLP-DMSRLIDLRIV 91 (557)
Q Consensus 22 ~c~~~-~~~~v~c~~--------~~p~~l~~L~L~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~-~~~~l~~L~~L 91 (557)
+|+.| ..+.+.|+. ..|++++.|+|++|.+++..|..|.++++|+.|+|++|+|++..| .|.++++|++|
T Consensus 26 ~~~~~~~~~~l~ls~~~L~~ip~~~~~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L 105 (562)
T 3a79_B 26 TPFSNELESMVDYSNRNLTHVPKDLPPRTKALSLSQNSISELRMPDISFLSELRVLRLSHNRIRSLDFHVFLFNQDLEYL 105 (562)
T ss_dssp -------CCEEECTTSCCCSCCTTSCTTCCEEECCSSCCCCCCGGGTTTCTTCCEEECCSCCCCEECTTTTTTCTTCCEE
T ss_pred cccccCCCcEEEcCCCCCccCCCCCCCCcCEEECCCCCccccChhhhccCCCccEEECCCCCCCcCCHHHhCCCCCCCEE
Confidence 34444 234677765 246789999999999997677899999999999999999999988 59999999999
Q ss_pred EecCccccCcCCCccCCCCcccccccccccCCCCCC--cccc--cCceeeeecCCCc
Q 008707 92 HLENNELTGSLPSYMGSLPNLQELHIENNSFVGEIP--PALL--TGKVIFKYDNNPK 144 (557)
Q Consensus 92 ~l~~N~l~~~~p~~~~~l~~L~~l~l~~N~~~~~~p--~~~~--~~~~~~~~~~n~~ 144 (557)
+|++|+|+ .+|.. .+++|+.|++++|++. .+| ..+. ..+..+.+++|..
T Consensus 106 ~Ls~N~l~-~lp~~--~l~~L~~L~Ls~N~l~-~l~~p~~~~~l~~L~~L~L~~n~l 158 (562)
T 3a79_B 106 DVSHNRLQ-NISCC--PMASLRHLDLSFNDFD-VLPVCKEFGNLTKLTFLGLSAAKF 158 (562)
T ss_dssp ECTTSCCC-EECSC--CCTTCSEEECCSSCCS-BCCCCGGGGGCTTCCEEEEECSBC
T ss_pred ECCCCcCC-ccCcc--ccccCCEEECCCCCcc-ccCchHhhcccCcccEEecCCCcc
Confidence 99999999 88887 8999999999999998 544 4443 3556677777764
No 335
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=99.11 E-value=4.2e-11 Score=135.57 Aligned_cols=107 Identities=22% Similarity=0.315 Sum_probs=83.6
Q ss_pred CceEEEEecCCCcc-----ccCCccccCCCCCcEEECcCCCCCCCCCC-ccCCCCCcEEEecCccccCcCCCccCCCCcc
Q 008707 39 PRITKIALSGKNLK-----GEIPPELKNMEALTELWLDGNFLTGPLPD-MSRLIDLRIVHLENNELTGSLPSYMGSLPNL 112 (557)
Q Consensus 39 ~~l~~L~L~~n~l~-----~~~p~~~~~l~~L~~L~l~~N~l~~~~~~-~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L 112 (557)
++|+.|+|++|.++ +..|..|.++++|+.|+|++|+|++.+|. |..+++|+.|+|++|+|++..|..+. ++|
T Consensus 451 ~~L~~L~Ls~N~l~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~--~~L 528 (844)
T 3j0a_A 451 PSLEQLFLGENMLQLAWETELCWDVFEGLSHLQVLYLNHNYLNSLPPGVFSHLTALRGLSLNSNRLTVLSHNDLP--ANL 528 (844)
T ss_dssp TTCCBCEEESCCCSSSCCSCCCSSCSSCBCCEECCCCCHHHHTTCCTTSSSSCCSCSEEEEESCCCSSCCCCCCC--SCC
T ss_pred CccccccCCCCccccccccccchhhhcCcccccEEECCCCcccccChhHccchhhhheeECCCCCCCccChhhhh--ccc
Confidence 45666666666665 33345577888999999999999988884 88999999999999999955555554 789
Q ss_pred cccccccccCCCCCCcccccCceeeeecCCCccccc
Q 008707 113 QELHIENNSFVGEIPPALLTGKVIFKYDNNPKLHKE 148 (557)
Q Consensus 113 ~~l~l~~N~~~~~~p~~~~~~~~~~~~~~n~~~~~~ 148 (557)
+.|++++|++++..| ..+..+..+.+.+||+.|++
T Consensus 529 ~~L~Ls~N~l~~~~~-~~~~~L~~l~l~~Np~~C~c 563 (844)
T 3j0a_A 529 EILDISRNQLLAPNP-DVFVSLSVLDITHNKFICEC 563 (844)
T ss_dssp CEEEEEEECCCCCCS-CCCSSCCEEEEEEECCCCSS
T ss_pred cEEECCCCcCCCCCh-hHhCCcCEEEecCCCccccc
Confidence 999999999995555 44567788899999999854
No 336
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=99.11 E-value=6.2e-11 Score=118.98 Aligned_cols=107 Identities=22% Similarity=0.227 Sum_probs=93.4
Q ss_pred CCceEEEEecCCCccccCCccccCCCCCcEEECcCCCCCCCCC-CccCCCCCcEEEecCccccCcCCCccCCCCcccccc
Q 008707 38 PPRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLP-DMSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELH 116 (557)
Q Consensus 38 p~~l~~L~L~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~-~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~l~ 116 (557)
+++|+.|+|++|.+++..|..+.++++|+.|+|++|+|++.++ .|..+++|+.|+|++|+++ .+|..+..+++|+.|+
T Consensus 192 ~~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~L~~L~ 270 (332)
T 2ft3_A 192 PETLNELHLDHNKIQAIELEDLLRYSKLYRLGLGHNQIRMIENGSLSFLPTLRELHLDNNKLS-RVPAGLPDLKLLQVVY 270 (332)
T ss_dssp CSSCSCCBCCSSCCCCCCTTSSTTCTTCSCCBCCSSCCCCCCTTGGGGCTTCCEEECCSSCCC-BCCTTGGGCTTCCEEE
T ss_pred cCCCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCCcCChhHhhCCCCCCEEECCCCcCe-ecChhhhcCccCCEEE
Confidence 3689999999999997777889999999999999999999988 5999999999999999999 9999999999999999
Q ss_pred cccccCCCCCCcccccC---------ceeeeecCCCccc
Q 008707 117 IENNSFVGEIPPALLTG---------KVIFKYDNNPKLH 146 (557)
Q Consensus 117 l~~N~~~~~~p~~~~~~---------~~~~~~~~n~~~~ 146 (557)
+++|+++ .+|...+.. +..+.+.+||..+
T Consensus 271 l~~N~l~-~~~~~~~~~~~~~~~~~~l~~L~l~~N~~~~ 308 (332)
T 2ft3_A 271 LHTNNIT-KVGVNDFCPVGFGVKRAYYNGISLFNNPVPY 308 (332)
T ss_dssp CCSSCCC-BCCTTSSSCSSCCSSSCCBSEEECCSSSSCG
T ss_pred CCCCCCC-ccChhHccccccccccccccceEeecCcccc
Confidence 9999998 777655432 3467888998764
No 337
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=99.11 E-value=8.8e-11 Score=132.94 Aligned_cols=119 Identities=15% Similarity=0.120 Sum_probs=91.9
Q ss_pred CCCCCCCeEEeeCCCCCceEEEEecCCCccccCCccccCCCCCcEEECcCCCCCCCC-C-CccCCCCCcEEEecCccccC
Q 008707 23 CVPVPWEWVTCSTTTPPRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPL-P-DMSRLIDLRIVHLENNELTG 100 (557)
Q Consensus 23 c~~~~~~~v~c~~~~p~~l~~L~L~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~-~-~~~~l~~L~~L~l~~N~l~~ 100 (557)
|..+.|+.|.+ .|++++.|+|++|.|++..|..|.++++|+.|+|++|.+.+.+ | .|.++++|+.|+|++|+|++
T Consensus 11 cs~~~L~~vP~---lp~~l~~LdLs~N~i~~i~~~~~~~l~~L~~LdLs~n~~~~~i~~~~f~~L~~L~~L~Ls~N~l~~ 87 (844)
T 3j0a_A 11 YRFCNLTQVPQ---VLNTTERLLLSFNYIRTVTASSFPFLEQLQLLELGSQYTPLTIDKEAFRNLPNLRILDLGSSKIYF 87 (844)
T ss_dssp ESCCCSSCCCS---SCTTCCEEEEESCCCCEECSSSCSSCCSCSEEEECTTCCCCEECTTTTSSCTTCCEEECTTCCCCE
T ss_pred ccCCCCCCCCC---CCCCcCEEECCCCcCCccChhHCcccccCeEEeCCCCCCccccCHHHhcCCCCCCEEECCCCcCcc
Confidence 33444555543 6789999999999999888888999999999999999666654 4 58889999999999999987
Q ss_pred cCCCccCCCCcccccccccccCCCCCCcc-cc---cCceeeeecCCCc
Q 008707 101 SLPSYMGSLPNLQELHIENNSFVGEIPPA-LL---TGKVIFKYDNNPK 144 (557)
Q Consensus 101 ~~p~~~~~l~~L~~l~l~~N~~~~~~p~~-~~---~~~~~~~~~~n~~ 144 (557)
..|..|..+++|+.|++++|++.+.+|.. .+ ..+..+.+++|..
T Consensus 88 ~~p~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~L~~L~~L~Ls~N~l 135 (844)
T 3j0a_A 88 LHPDAFQGLFHLFELRLYFCGLSDAVLKDGYFRNLKALTRLDLSKNQI 135 (844)
T ss_dssp ECTTSSCSCSSCCCEECTTCCCSSCCSTTCCCSSCSSCCEEEEESCCC
T ss_pred cCHhHccCCcccCEeeCcCCCCCcccccCccccccCCCCEEECCCCcc
Confidence 77888888999999999999888666654 22 2445666777654
No 338
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=99.11 E-value=1.1e-10 Score=128.83 Aligned_cols=117 Identities=26% Similarity=0.362 Sum_probs=87.4
Q ss_pred CCCCCeEEeeC--------CCCCceEEEEecCCCccccCCccccCCCCCcEEECcCCCCCCCCCC-ccCCCCCcEEEecC
Q 008707 25 PVPWEWVTCST--------TTPPRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPD-MSRLIDLRIVHLEN 95 (557)
Q Consensus 25 ~~~~~~v~c~~--------~~p~~l~~L~L~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~-~~~l~~L~~L~l~~ 95 (557)
.|.++.+.|+. ..|++++.|+|++|.+++..+..|.++++|+.|+|++|.+++.+|. |.++++|+.|+|++
T Consensus 3 ~~~~~~~~cs~~~L~~ip~~~~~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~ 82 (680)
T 1ziw_A 3 TVSHEVADCSHLKLTQVPDDLPTNITVLNLTHNQLRRLPAANFTRYSQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQH 82 (680)
T ss_dssp -CBSSEEECCSSCCSSCCSCSCTTCSEEECCSSCCCCCCGGGGGGGTTCSEEECCSSCCCCCCTTHHHHCTTCCEEECCS
T ss_pred eeECCeeECCCCCccccccccCCCCcEEECCCCCCCCcCHHHHhCCCcCcEEECCCCccCccCHHHHhcccCcCEEECCC
Confidence 35567778876 3467889999999999966666788888999999998888888774 78888888888888
Q ss_pred ccccCcCCC-ccCCCCcccccccccccCCCCCCcccc---cCceeeeecCCC
Q 008707 96 NELTGSLPS-YMGSLPNLQELHIENNSFVGEIPPALL---TGKVIFKYDNNP 143 (557)
Q Consensus 96 N~l~~~~p~-~~~~l~~L~~l~l~~N~~~~~~p~~~~---~~~~~~~~~~n~ 143 (557)
|+++ .+|. .|+.+++|++|++++|++. .+|+..+ ..+..+.+.+|.
T Consensus 83 n~l~-~l~~~~~~~l~~L~~L~L~~n~l~-~~~~~~~~~l~~L~~L~Ls~n~ 132 (680)
T 1ziw_A 83 NELS-QLSDKTFAFCTNLTELHLMSNSIQ-KIKNNPFVKQKNLITLDLSHNG 132 (680)
T ss_dssp SCCC-CCCTTTTTTCTTCSEEECCSSCCC-CCCSCTTTTCTTCCEEECCSSC
T ss_pred CccC-ccChhhhccCCCCCEEECCCCccC-ccChhHccccCCCCEEECCCCc
Confidence 8888 4554 6888888888888888887 5554332 234555666654
No 339
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.10 E-value=8.4e-11 Score=126.46 Aligned_cols=89 Identities=27% Similarity=0.308 Sum_probs=82.0
Q ss_pred CCceEEEEecCCCccccCCccccCCCCCcEEECcCCCCCCCCCCccCCCCCcEEEecCccccCcC-CCccCCCCcccccc
Q 008707 38 PPRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPDMSRLIDLRIVHLENNELTGSL-PSYMGSLPNLQELH 116 (557)
Q Consensus 38 p~~l~~L~L~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~l~~L~~L~l~~N~l~~~~-p~~~~~l~~L~~l~ 116 (557)
.++|+.|+|++|.|+ .+|..|++|++|+.|+|++|+|+++ |.|+.+++|+.|+|++|+|++.. |..++.+++|+.|+
T Consensus 462 l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~~l-p~l~~l~~L~~L~Ls~N~l~~~~~p~~l~~l~~L~~L~ 539 (567)
T 1dce_A 462 LLLVTHLDLSHNRLR-ALPPALAALRCLEVLQASDNALENV-DGVANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLN 539 (567)
T ss_dssp GTTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCCCC-GGGTTCSSCCEEECCSSCCCSSSTTGGGGGCTTCCEEE
T ss_pred cccCcEeecCccccc-ccchhhhcCCCCCEEECCCCCCCCC-cccCCCCCCcEEECCCCCCCCCCCcHHHhcCCCCCEEE
Confidence 358999999999999 9999999999999999999999995 49999999999999999999766 99999999999999
Q ss_pred cccccCCCCCCcc
Q 008707 117 IENNSFVGEIPPA 129 (557)
Q Consensus 117 l~~N~~~~~~p~~ 129 (557)
+++|+++ .+|+.
T Consensus 540 L~~N~l~-~~~~~ 551 (567)
T 1dce_A 540 LQGNSLC-QEEGI 551 (567)
T ss_dssp CTTSGGG-GSSSC
T ss_pred ecCCcCC-CCccH
Confidence 9999999 45543
No 340
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.08 E-value=2.3e-10 Score=111.60 Aligned_cols=108 Identities=19% Similarity=0.217 Sum_probs=91.2
Q ss_pred CCceEEEEecCCCccccCCccccCCCCCcEEECcCCCCCCCCC-CccCCCCCcEEEecCccccCcCCCccCCCCcccccc
Q 008707 38 PPRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLP-DMSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELH 116 (557)
Q Consensus 38 p~~l~~L~L~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~-~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~l~ 116 (557)
-++|+.|+|++|.+++..+..|.++++|+.|+|++|+|++.++ .|.++++|+.|++++|++++..+..+..+++|+.|+
T Consensus 51 l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ 130 (276)
T 2z62_A 51 FPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELN 130 (276)
T ss_dssp CTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTSCCCCSTTCCCTTCTTCCEEE
T ss_pred ccCCcEEECCCCcCCccCHHHccCCcCCCEEECCCCccCccChhhhcCCccccEEECCCCCccccCchhcccCCCCCEEE
Confidence 3689999999999997677789999999999999999999887 599999999999999999966666789999999999
Q ss_pred cccccCCC-CCCcccc--cCceeeeecCCCcc
Q 008707 117 IENNSFVG-EIPPALL--TGKVIFKYDNNPKL 145 (557)
Q Consensus 117 l~~N~~~~-~~p~~~~--~~~~~~~~~~n~~~ 145 (557)
+++|++.+ .+|..+. ..+..+.+++|...
T Consensus 131 l~~n~l~~~~l~~~~~~l~~L~~L~Ls~N~l~ 162 (276)
T 2z62_A 131 VAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQ 162 (276)
T ss_dssp CCSSCCCCCCCCGGGGGCTTCCEEECCSSCCC
T ss_pred CcCCccceecCchhhccCCCCCEEECCCCCCC
Confidence 99999984 2676654 35667778887643
No 341
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.08 E-value=4.5e-11 Score=118.94 Aligned_cols=86 Identities=17% Similarity=0.243 Sum_probs=48.0
Q ss_pred CceEEEEecCCCccccCCccc--cCCCCCcEEECcCCCCCCCCCCccCC-----CCCcEEEecCccccCcCCCccCCCCc
Q 008707 39 PRITKIALSGKNLKGEIPPEL--KNMEALTELWLDGNFLTGPLPDMSRL-----IDLRIVHLENNELTGSLPSYMGSLPN 111 (557)
Q Consensus 39 ~~l~~L~L~~n~l~~~~p~~~--~~l~~L~~L~l~~N~l~~~~~~~~~l-----~~L~~L~l~~N~l~~~~p~~~~~l~~ 111 (557)
++|+.|+|++|++++.+|..+ ..+++|+.|+|++|+|++.++.+..+ ++|++|+|++|++++..|..|+.+++
T Consensus 95 ~~L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~l~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~~ 174 (312)
T 1wwl_A 95 SGLQELTLENLEVTGTAPPPLLEATGPDLNILNLRNVSWATRDAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQVRVFPA 174 (312)
T ss_dssp SCCCEEEEEEEBCBSCCCCCSSSCCSCCCSEEEEESCBCSSSSSHHHHHHTTCCTTCCEEEEESCSCCCCCTTTCCCCSS
T ss_pred CCccEEEccCCcccchhHHHHHHhcCCCccEEEccCCCCcchhHHHHHHHHhhcCCCcEEEeeCCCCccchHHHhccCCC
Confidence 345556666666655555554 55556666666666665552234444 55666666666665444455555566
Q ss_pred ccccccccccCCC
Q 008707 112 LQELHIENNSFVG 124 (557)
Q Consensus 112 L~~l~l~~N~~~~ 124 (557)
|+.|++++|++.|
T Consensus 175 L~~L~Ls~N~l~~ 187 (312)
T 1wwl_A 175 LSTLDLSDNPELG 187 (312)
T ss_dssp CCEEECCSCTTCH
T ss_pred CCEEECCCCCcCc
Confidence 6666666665543
No 342
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.07 E-value=2.8e-10 Score=123.74 Aligned_cols=106 Identities=18% Similarity=0.232 Sum_probs=89.6
Q ss_pred CceEEEEecCCCccccCCccccCCCCCcEEECcCCCCCCCCCC-ccCCCCCcEEEecCccccCcCCC-ccCCCCcccccc
Q 008707 39 PRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPD-MSRLIDLRIVHLENNELTGSLPS-YMGSLPNLQELH 116 (557)
Q Consensus 39 ~~l~~L~L~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~-~~~l~~L~~L~l~~N~l~~~~p~-~~~~l~~L~~l~ 116 (557)
++|+.|+|++|.|++..|..|.++++|+.|+|++|.|++.+|. |+++++|+.|+|++|.|+ .+|. .|..+++|+.|+
T Consensus 75 ~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~-~l~~~~~~~l~~L~~L~ 153 (597)
T 3oja_B 75 RQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLS-SLPRGIFHNTPKLTTLS 153 (597)
T ss_dssp CCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCTTCCEEE
T ss_pred CCCcEEECCCCCCCCCChHHhcCCCCCCEEECCCCcCCCCCHHHHcCCCCCCEEEeeCCCCC-CCCHHHhccCCCCCEEE
Confidence 5799999999999987788999999999999999999999885 899999999999999999 5555 468999999999
Q ss_pred cccccCCCCCCcccc--cCceeeeecCCCcc
Q 008707 117 IENNSFVGEIPPALL--TGKVIFKYDNNPKL 145 (557)
Q Consensus 117 l~~N~~~~~~p~~~~--~~~~~~~~~~n~~~ 145 (557)
+++|.+.+..|..+. ..+..+.+++|...
T Consensus 154 Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~ 184 (597)
T 3oja_B 154 MSNNNLERIEDDTFQATTSLQNLQLSSNRLT 184 (597)
T ss_dssp CCSSCCCBCCTTTTTTCTTCCEEECTTSCCS
T ss_pred eeCCcCCCCChhhhhcCCcCcEEECcCCCCC
Confidence 999999954444443 35567778888644
No 343
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.07 E-value=4e-11 Score=132.99 Aligned_cols=93 Identities=31% Similarity=0.399 Sum_probs=85.4
Q ss_pred CCceEEEEecCCCccccCCccccCCCCCcEEECcCCCCCCCCCCccCCCCCcEEEecCccccCcCCCccCCCCccccccc
Q 008707 38 PPRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPDMSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELHI 117 (557)
Q Consensus 38 p~~l~~L~L~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~l~l 117 (557)
.++|+.|+|++|.|+ .+|..|++|++|+.|+|++|+|+.++..|++|++|+.|+|++|.|+ .+|..|+.|++|+.|+|
T Consensus 246 l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~~lp~~~~~l~~L~~L~L~~N~l~-~lp~~~~~l~~L~~L~L 323 (727)
T 4b8c_D 246 YDFLTRLYLNGNSLT-ELPAEIKNLSNLRVLDLSHNRLTSLPAELGSCFQLKYFYFFDNMVT-TLPWEFGNLCNLQFLGV 323 (727)
T ss_dssp CCSCSCCBCTTSCCS-CCCGGGGGGTTCCEEECTTSCCSSCCSSGGGGTTCSEEECCSSCCC-CCCSSTTSCTTCCCEEC
T ss_pred CCCCCEEEeeCCcCc-ccChhhhCCCCCCEEeCcCCcCCccChhhcCCCCCCEEECCCCCCC-ccChhhhcCCCccEEeC
Confidence 367999999999999 9999999999999999999999966557999999999999999998 99999999999999999
Q ss_pred ccccCCCCCCccccc
Q 008707 118 ENNSFVGEIPPALLT 132 (557)
Q Consensus 118 ~~N~~~~~~p~~~~~ 132 (557)
++|+|.+.+|..+..
T Consensus 324 ~~N~l~~~~p~~~~~ 338 (727)
T 4b8c_D 324 EGNPLEKQFLKILTE 338 (727)
T ss_dssp TTSCCCSHHHHHHHH
T ss_pred CCCccCCCChHHHhh
Confidence 999999777776643
No 344
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=99.07 E-value=1.6e-10 Score=124.75 Aligned_cols=109 Identities=20% Similarity=0.276 Sum_probs=88.2
Q ss_pred CceEEEEecCCCccccCCccccCCCCCcEEECcCCCCC-CCCC-CccCCCCCcEEEecCccccCcCCCccCCCCcccccc
Q 008707 39 PRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLT-GPLP-DMSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELH 116 (557)
Q Consensus 39 ~~l~~L~L~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~-~~~~-~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~l~ 116 (557)
++|+.|+|++|.+++..|..+.++++|+.|+|++|+++ +.+| .|..+++|+.|+|++|++++..|..+..+++|+.|+
T Consensus 421 ~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ 500 (570)
T 2z63_A 421 RNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLN 500 (570)
T ss_dssp TTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEE
T ss_pred CCCCEEeCcCCcccccchhhhhcCCcCcEEECcCCcCccccchhhhhcccCCCEEECCCCccccCChhhhhcccCCCEEe
Confidence 57888888888888778888888888888888888887 4555 588888999999999999877788888899999999
Q ss_pred cccccCCCCCCcccc---cCceeeeecCCCccccc
Q 008707 117 IENNSFVGEIPPALL---TGKVIFKYDNNPKLHKE 148 (557)
Q Consensus 117 l~~N~~~~~~p~~~~---~~~~~~~~~~n~~~~~~ 148 (557)
+++|+++ .+|+..+ ..+..+.+++|++.|.+
T Consensus 501 l~~n~l~-~~~~~~~~~l~~L~~L~l~~N~~~~~~ 534 (570)
T 2z63_A 501 MASNQLK-SVPDGIFDRLTSLQKIWLHTNPWDCSC 534 (570)
T ss_dssp CCSSCCS-CCCTTTTTTCTTCCEEECCSSCBCCCT
T ss_pred CCCCcCC-CCCHHHhhcccCCcEEEecCCcccCCC
Confidence 9999998 4554433 35567788999988864
No 345
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.07 E-value=1e-10 Score=116.64 Aligned_cols=106 Identities=21% Similarity=0.203 Sum_probs=63.0
Q ss_pred CceEEEEecCCCccccCCcccc-CCCCCcEEECcCCCCCCCCCCccCCCCCcEEEecCccccCcCCCccCCCCccccccc
Q 008707 39 PRITKIALSGKNLKGEIPPELK-NMEALTELWLDGNFLTGPLPDMSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELHI 117 (557)
Q Consensus 39 ~~l~~L~L~~n~l~~~~p~~~~-~l~~L~~L~l~~N~l~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~l~l 117 (557)
++|+.|+|++|.+++..|..+. .+++|+.|+|++|+|++.+ ....+++|+.|+|++|+|+ .+|..+..+++|+.|++
T Consensus 144 ~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~-~~~~l~~L~~L~Ls~N~l~-~l~~~~~~l~~L~~L~L 221 (317)
T 3o53_A 144 SRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYDVK-GQVVFAKLKTLDLSSNKLA-FMGPEFQSAAGVTWISL 221 (317)
T ss_dssp SSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCEEE-CCCCCTTCCEEECCSSCCC-EECGGGGGGTTCSEEEC
T ss_pred CCCCEEECCCCCCCcccHHHHhhccCcCCEEECCCCcCcccc-cccccccCCEEECCCCcCC-cchhhhcccCcccEEEC
Confidence 3455555555555544444442 4556666666666655542 2223666666666777666 45555666777777777
Q ss_pred ccccCCCCCCcccc--cCceeeeecCCCcccc
Q 008707 118 ENNSFVGEIPPALL--TGKVIFKYDNNPKLHK 147 (557)
Q Consensus 118 ~~N~~~~~~p~~~~--~~~~~~~~~~n~~~~~ 147 (557)
++|+++ .+|..+. ..+..+.+++|++.|+
T Consensus 222 ~~N~l~-~l~~~~~~l~~L~~L~l~~N~~~~~ 252 (317)
T 3o53_A 222 RNNKLV-LIEKALRFSQNLEHFDLRGNGFHCG 252 (317)
T ss_dssp TTSCCC-EECTTCCCCTTCCEEECTTCCCBHH
T ss_pred cCCccc-chhhHhhcCCCCCEEEccCCCccCc
Confidence 777776 5666543 2455667777777654
No 346
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=99.06 E-value=1.5e-10 Score=125.94 Aligned_cols=109 Identities=21% Similarity=0.232 Sum_probs=63.2
Q ss_pred CceEEEEecCCCcccc---CCccccCCCCCcEEECcCCCCCCCCC-CccCCCCCcEEEecCccccCcCCCccCCCCcccc
Q 008707 39 PRITKIALSGKNLKGE---IPPELKNMEALTELWLDGNFLTGPLP-DMSRLIDLRIVHLENNELTGSLPSYMGSLPNLQE 114 (557)
Q Consensus 39 ~~l~~L~L~~n~l~~~---~p~~~~~l~~L~~L~l~~N~l~~~~~-~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~ 114 (557)
++|+.|+|++|.+++. .+..+..+++|+.|+|++|++++.+| .|..+++|+.|+|++|++++..|..+..+++| .
T Consensus 449 ~~L~~L~L~~n~l~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L-~ 527 (606)
T 3t6q_A 449 PALQHLNLQGNHFPKGNIQKTNSLQTLGRLEILVLSFCDLSSIDQHAFTSLKMMNHVDLSHNRLTSSSIEALSHLKGI-Y 527 (606)
T ss_dssp TTCCEEECTTCBCGGGEECSSCGGGGCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCGGGGGGGTTCCSC-E
T ss_pred CCCCEEECCCCCCCccccccchhhccCCCccEEECCCCccCccChhhhccccCCCEEECCCCccCcCChhHhCccccc-E
Confidence 4555555555555541 12345555566666666666665555 36666666666666666665566666666666 6
Q ss_pred cccccccCCCCCCccc--ccCceeeeecCCCccccc
Q 008707 115 LHIENNSFVGEIPPAL--LTGKVIFKYDNNPKLHKE 148 (557)
Q Consensus 115 l~l~~N~~~~~~p~~~--~~~~~~~~~~~n~~~~~~ 148 (557)
|++++|++++..|..+ ...+..+.+.+||+.|++
T Consensus 528 L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c 563 (606)
T 3t6q_A 528 LNLASNHISIILPSLLPILSQQRTINLRQNPLDCTC 563 (606)
T ss_dssp EECCSSCCCCCCGGGHHHHHTSSEEECTTCCEECSG
T ss_pred EECcCCcccccCHhhcccCCCCCEEeCCCCCccccC
Confidence 6666666663222222 224566778888888764
No 347
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=99.06 E-value=2.7e-10 Score=125.86 Aligned_cols=90 Identities=20% Similarity=0.211 Sum_probs=56.9
Q ss_pred ccCCCCCcEEECcCCCCCCCCC-CccCCCCCcEEEecCccccCcCCCccCCCCcccccccccccCCCCCCccc----ccC
Q 008707 59 LKNMEALTELWLDGNFLTGPLP-DMSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELHIENNSFVGEIPPAL----LTG 133 (557)
Q Consensus 59 ~~~l~~L~~L~l~~N~l~~~~~-~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~l~l~~N~~~~~~p~~~----~~~ 133 (557)
+.++++|+.|+|++|+|+.+++ .|.++++|+.|+|++|+|++..+..|..+++|+.|++++|+++ .+|+.. +..
T Consensus 532 ~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~L~~N~l~-~~~~~~~~~~~~~ 610 (680)
T 1ziw_A 532 LKGLSHLHILNLESNGFDEIPVEVFKDLFELKIIDLGLNNLNTLPASVFNNQVSLKSLNLQKNLIT-SVEKKVFGPAFRN 610 (680)
T ss_dssp TTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECTTSCCC-BCCHHHHHHHHTT
T ss_pred hcCCCCCCEEECCCCCCCCCCHHHcccccCcceeECCCCCCCcCCHhHhCCCCCCCEEECCCCcCC-ccChhHhcccccc
Confidence 4555555566666666665554 3666666777777777766333334556677777777777776 444432 345
Q ss_pred ceeeeecCCCcccccc
Q 008707 134 KVIFKYDNNPKLHKES 149 (557)
Q Consensus 134 ~~~~~~~~n~~~~~~~ 149 (557)
+..+.+.+||+.|++.
T Consensus 611 L~~l~l~~N~~~c~c~ 626 (680)
T 1ziw_A 611 LTELDMRFNPFDCTCE 626 (680)
T ss_dssp CSEEECTTCCCCBCCC
T ss_pred cCEEEccCCCcccCCc
Confidence 6678899999999865
No 348
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=99.05 E-value=2.8e-10 Score=122.84 Aligned_cols=108 Identities=23% Similarity=0.328 Sum_probs=74.5
Q ss_pred CceEEEEecCCCccc--cCCccccCCCCCcEEECcCCCCCC-CCCC-ccCC----------------------CCCcEEE
Q 008707 39 PRITKIALSGKNLKG--EIPPELKNMEALTELWLDGNFLTG-PLPD-MSRL----------------------IDLRIVH 92 (557)
Q Consensus 39 ~~l~~L~L~~n~l~~--~~p~~~~~l~~L~~L~l~~N~l~~-~~~~-~~~l----------------------~~L~~L~ 92 (557)
++|+.|+|++|++++ .+|..+.++++|+.|+|++|++++ .++. +..+ ++|+.|+
T Consensus 377 ~~L~~L~L~~N~l~~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~~L~~L~ 456 (562)
T 3a79_B 377 KRLQTLILQRNGLKNFFKVALMTKNMSSLETLDVSLNSLNSHAYDRTCAWAESILVLNLSSNMLTGSVFRCLPPKVKVLD 456 (562)
T ss_dssp SSCCEEECCSSCCCBTTHHHHTTTTCTTCCEEECTTSCCBSCCSSCCCCCCTTCCEEECCSSCCCGGGGSSCCTTCSEEE
T ss_pred CCCCEEECCCCCcCCcccchhhhcCCCCCCEEECCCCcCCCccChhhhcCcccCCEEECCCCCCCcchhhhhcCcCCEEE
Confidence 567777777777774 233456777777777777777776 3332 4433 4666666
Q ss_pred ecCccccCcCCCccCCCCcccccccccccCCCCCCccccc---CceeeeecCCCccccc
Q 008707 93 LENNELTGSLPSYMGSLPNLQELHIENNSFVGEIPPALLT---GKVIFKYDNNPKLHKE 148 (557)
Q Consensus 93 l~~N~l~~~~p~~~~~l~~L~~l~l~~N~~~~~~p~~~~~---~~~~~~~~~n~~~~~~ 148 (557)
|++|+|+ .+|..+..+++|+.|++++|+++ .+|...+. .+..+.+++||+.|++
T Consensus 457 L~~N~l~-~ip~~~~~l~~L~~L~L~~N~l~-~l~~~~~~~l~~L~~L~l~~N~~~c~c 513 (562)
T 3a79_B 457 LHNNRIM-SIPKDVTHLQALQELNVASNQLK-SVPDGVFDRLTSLQYIWLHDNPWDCTC 513 (562)
T ss_dssp CCSSCCC-CCCTTTTSSCCCSEEECCSSCCC-CCCTTSTTTCTTCCCEECCSCCBCCCH
T ss_pred CCCCcCc-ccChhhcCCCCCCEEECCCCCCC-CCCHHHHhcCCCCCEEEecCCCcCCCc
Confidence 6666666 67777778888888888888888 78876332 4556788899988874
No 349
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=99.05 E-value=4.5e-10 Score=115.29 Aligned_cols=105 Identities=19% Similarity=0.257 Sum_probs=89.2
Q ss_pred CceEEEEecCCCccccCCccccCCCCCcEEECcCCCCCCCCCC-ccCCCCCcEEEecCccccCcCCCc-cCCCCcccccc
Q 008707 39 PRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPD-MSRLIDLRIVHLENNELTGSLPSY-MGSLPNLQELH 116 (557)
Q Consensus 39 ~~l~~L~L~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~-~~~l~~L~~L~l~~N~l~~~~p~~-~~~l~~L~~l~ 116 (557)
++|+.|+|++|.+++..|..|.++++|+.|+|++|.+++.+|. |.++++|+.|+|++|+++ .+|.. |..+++|+.|+
T Consensus 69 ~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~-~l~~~~~~~l~~L~~L~ 147 (390)
T 3o6n_A 69 RQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLS-SLPRGIFHNTPKLTTLS 147 (390)
T ss_dssp CCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCTTCCEEE
T ss_pred ccCcEEECCCCcccccChhhccCCCCcCEEECCCCCCCcCCHHHhcCCCCCCEEECCCCccC-cCCHHHhcCCCCCcEEE
Confidence 6799999999999977777899999999999999999999885 899999999999999999 66665 58999999999
Q ss_pred cccccCCCCCCcccc---cCceeeeecCCCcc
Q 008707 117 IENNSFVGEIPPALL---TGKVIFKYDNNPKL 145 (557)
Q Consensus 117 l~~N~~~~~~p~~~~---~~~~~~~~~~n~~~ 145 (557)
+++|++. .+++..+ ..+..+.+.+|...
T Consensus 148 L~~n~l~-~~~~~~~~~l~~L~~L~l~~n~l~ 178 (390)
T 3o6n_A 148 MSNNNLE-RIEDDTFQATTSLQNLQLSSNRLT 178 (390)
T ss_dssp CCSSCCC-BCCTTTTSSCTTCCEEECCSSCCS
T ss_pred CCCCccC-ccChhhccCCCCCCEEECCCCcCC
Confidence 9999998 5554433 35567778887644
No 350
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.05 E-value=7.9e-11 Score=103.46 Aligned_cols=88 Identities=18% Similarity=0.214 Sum_probs=77.8
Q ss_pred CCceEEEEecCCCccccCCccccCCCCCcEEECcCCCCCCCCCC-ccCCCCCcEEEecCccccCc-CCCccCCCCccccc
Q 008707 38 PPRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPD-MSRLIDLRIVHLENNELTGS-LPSYMGSLPNLQEL 115 (557)
Q Consensus 38 p~~l~~L~L~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~-~~~l~~L~~L~l~~N~l~~~-~p~~~~~l~~L~~l 115 (557)
-++|+.|+|++|.+++. ..+.++++|+.|+|++|+|++.+|. +..+++|+.|++++|++++. .|..+..+++|+.|
T Consensus 41 l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~ls~N~i~~~~~~~~~~~l~~L~~L 118 (149)
T 2je0_A 41 FEELEFLSTINVGLTSI--ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTHLNLSGNKIKDLSTIEPLKKLENLKSL 118 (149)
T ss_dssp CTTCCEEECTTSCCCCC--TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCEEECTTSCCCSHHHHGGGGGCTTCCEE
T ss_pred cCCCcEEECcCCCCCCc--hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCEEECCCCcCCChHHHHHHhhCCCCCEE
Confidence 36899999999999955 7799999999999999999997774 77799999999999999952 34789999999999
Q ss_pred ccccccCCCCCCc
Q 008707 116 HIENNSFVGEIPP 128 (557)
Q Consensus 116 ~l~~N~~~~~~p~ 128 (557)
++++|+++ .+|.
T Consensus 119 ~l~~N~l~-~~~~ 130 (149)
T 2je0_A 119 DLFNCEVT-NLND 130 (149)
T ss_dssp ECTTCGGG-GSTT
T ss_pred eCcCCccc-chHH
Confidence 99999998 5655
No 351
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=99.03 E-value=4.2e-10 Score=121.45 Aligned_cols=107 Identities=15% Similarity=0.060 Sum_probs=86.1
Q ss_pred CCCceEEEEecCCCccccCCccccCCCCCcEEECcCCCCCCCCC-CccCCCCCcEEEecCccccCcCCCccCCCCccccc
Q 008707 37 TPPRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLP-DMSRLIDLRIVHLENNELTGSLPSYMGSLPNLQEL 115 (557)
Q Consensus 37 ~p~~l~~L~L~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~-~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~l 115 (557)
.|++++.|+|++|++++..+..|.++++|+.|+|++|+|++.++ .|.++++|++|+|++|++++..|..|.++++|+.|
T Consensus 26 l~~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L 105 (570)
T 2z63_A 26 LPFSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKL 105 (570)
T ss_dssp SCSSCCEEECCSCCCCEECTTTTTTCSSCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEE
T ss_pred ccccccEEEccCCccCccChhHhhCCCCceEEECCCCcCCccCcccccCchhCCEEeCcCCcCCccCHhhhcCccccccc
Confidence 46788999999999997777788999999999999999998877 48889999999999999986666788888889999
Q ss_pred ccccccCCCCCCcccc---cCceeeeecCCCc
Q 008707 116 HIENNSFVGEIPPALL---TGKVIFKYDNNPK 144 (557)
Q Consensus 116 ~l~~N~~~~~~p~~~~---~~~~~~~~~~n~~ 144 (557)
++++|++. .+|...+ ..+..+.+++|..
T Consensus 106 ~L~~n~l~-~l~~~~~~~l~~L~~L~L~~n~l 136 (570)
T 2z63_A 106 VAVETNLA-SLENFPIGHLKTLKELNVAHNLI 136 (570)
T ss_dssp ECTTSCCC-CSTTCSCTTCTTCCEEECCSSCC
T ss_pred cccccccc-cCCCccccccccccEEecCCCcc
Confidence 99988888 6665322 3455666777653
No 352
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=99.01 E-value=3.7e-10 Score=120.54 Aligned_cols=108 Identities=21% Similarity=0.290 Sum_probs=70.5
Q ss_pred CceEEEEecCCCccc--cCCccccCCCCCcEEECcCCCCCCCCC-C-ccCCC----------------------CCcEEE
Q 008707 39 PRITKIALSGKNLKG--EIPPELKNMEALTELWLDGNFLTGPLP-D-MSRLI----------------------DLRIVH 92 (557)
Q Consensus 39 ~~l~~L~L~~n~l~~--~~p~~~~~l~~L~~L~l~~N~l~~~~~-~-~~~l~----------------------~L~~L~ 92 (557)
++|+.|+|++|++++ .+|..+.++++|+.|+|++|++++.+| . +..++ +|+.|+
T Consensus 348 ~~L~~L~L~~N~l~~l~~~~~~~~~l~~L~~L~Ls~N~l~~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~~L~~L~ 427 (520)
T 2z7x_B 348 TELETLILQMNQLKELSKIAEMTTQMKSLQQLDISQNSVSYDEKKGDCSWTKSLLSLNMSSNILTDTIFRCLPPRIKVLD 427 (520)
T ss_dssp SSCCEEECCSSCCCBHHHHHHHHTTCTTCCEEECCSSCCBCCGGGCSCCCCTTCCEEECCSSCCCGGGGGSCCTTCCEEE
T ss_pred CCCCEEEccCCccCccccchHHHhhCCCCCEEECCCCcCCcccccchhccCccCCEEECcCCCCCcchhhhhcccCCEEE
Confidence 467777777777775 455566777777777777777776333 2 44444 555555
Q ss_pred ecCccccCcCCCccCCCCcccccccccccCCCCCCcccc---cCceeeeecCCCccccc
Q 008707 93 LENNELTGSLPSYMGSLPNLQELHIENNSFVGEIPPALL---TGKVIFKYDNNPKLHKE 148 (557)
Q Consensus 93 l~~N~l~~~~p~~~~~l~~L~~l~l~~N~~~~~~p~~~~---~~~~~~~~~~n~~~~~~ 148 (557)
|++|+|+ .+|..+..+++|+.|++++|+++ .+|...+ ..+..+.+++|++.|++
T Consensus 428 Ls~N~l~-~ip~~~~~l~~L~~L~L~~N~l~-~l~~~~~~~l~~L~~L~l~~N~~~c~c 484 (520)
T 2z7x_B 428 LHSNKIK-SIPKQVVKLEALQELNVASNQLK-SVPDGIFDRLTSLQKIWLHTNPWDCSC 484 (520)
T ss_dssp CCSSCCC-CCCGGGGGCTTCCEEECCSSCCC-CCCTTTTTTCTTCCEEECCSSCBCCCH
T ss_pred CCCCccc-ccchhhhcCCCCCEEECCCCcCC-ccCHHHhccCCcccEEECcCCCCcccC
Confidence 5556655 56666667777777777777777 6776633 24556677888877763
No 353
>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}
Probab=99.01 E-value=1.1e-09 Score=111.00 Aligned_cols=140 Identities=16% Similarity=0.232 Sum_probs=105.7
Q ss_pred cccCCCCceEEEEEEEcCCcEEEEEEcc--Ccc-chhHHHHHHHHHHHhhcC--CCCccceeeEEEec---CeeEEEEEe
Q 008707 241 KKIGKGSFGSVYYGKMKDGKEVAVKIMA--DSC-SHRTQQFVTEVALLSRIH--HRNLVPLIGYCEEE---HQRILVYEY 312 (557)
Q Consensus 241 ~~lG~G~~g~Vy~~~~~~~~~vavK~~~--~~~-~~~~~~~~~E~~il~~l~--h~nIv~~~~~~~~~---~~~~lv~e~ 312 (557)
+.++.|.++.||+.... +..+++|+.. ... ......+.+|+++++.+. +..+++++.++.+. +..++||||
T Consensus 44 ~~l~~G~sn~~y~v~~~-~~~~vlr~~~~p~~~~~~~~~~~~~E~~~l~~L~~~~vpvP~~~~~~~~~~~~g~~~~vme~ 122 (359)
T 3dxp_A 44 EQFKGGQSNPTFKLVTP-GQTYVMRAKPGPKSKLLPSAHAIEREYRVMDALAGTDVPVAKMYALCEDESVIGRAFYIMEF 122 (359)
T ss_dssp EECCC-CCSCEEEEECS-SCEEEEECCCC----------CHHHHHHHHHHHTTSSSCCCCEEEEECCTTTTSSCEEEEEC
T ss_pred EEcCCcccceEEEEEEC-CceEEEEeCCCCCCCCCCcHHHHHHHHHHHHHhhcCCCCCCcEEEECCCCCccCCeEEEEEe
Confidence 56899999999999876 4678888765 322 122356788999999996 45678888888776 458999999
Q ss_pred cCCCChhhhhhccCCCCCcCHHHHHHHHHHHHHHHHHHHcCC--------------------------------------
Q 008707 313 MHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGC-------------------------------------- 354 (557)
Q Consensus 313 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~-------------------------------------- 354 (557)
++|..+.+.. ...++......++.+++++|+.||+..
T Consensus 123 v~G~~l~~~~-----~~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (359)
T 3dxp_A 123 VSGRVLWDQS-----LPGMSPAERTAIYDEMNRVIAAMHTVDYQAIGLGDYGKPGNYFQRQIERWTKQYKLSETESIPAM 197 (359)
T ss_dssp CCCBCCCCTT-----CTTCCHHHHHHHHHHHHHHHHHHHHSCTTTTTCTTSSCCSCHHHHHHHHHHHHHHHHCCSCCHHH
T ss_pred cCCeecCCCc-----cccCCHHHHHHHHHHHHHHHHHHhCCCchhccccccCCCCCchHHHHHHHHHHHHhcCCcCChHH
Confidence 9988775422 233677788889999999999999720
Q ss_pred -----------------CCCeEeeccCCCCEEeCCCCc--EEEecccCccc
Q 008707 355 -----------------NPGIIHRDVKSSNILLDINMR--AKVSDFGLSRQ 386 (557)
Q Consensus 355 -----------------~~~ivH~dlk~~NIll~~~~~--~kl~Dfgla~~ 386 (557)
...++|||+++.||+++.++. +.|.||+.+..
T Consensus 198 ~~~~~~l~~~~~~~~~~~~~lvHgD~~~~Nil~~~~~~~v~~viDwe~a~~ 248 (359)
T 3dxp_A 198 DSLMDWLPQHIPQEDADLTSIVHGDYRLDNLMFHPTEPRVLAVLDWELSTL 248 (359)
T ss_dssp HHHHHHGGGCCCSTTSSCCEEECSSCSGGGEEECSSSSCEEEECCCTTCEE
T ss_pred HHHHHHHHhcCCCccCCCceEEeCCCCCCcEEEeCCCCcEEEEECcccccc
Confidence 257999999999999997753 68999998864
No 354
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=99.01 E-value=6.9e-10 Score=119.22 Aligned_cols=107 Identities=19% Similarity=0.164 Sum_probs=67.3
Q ss_pred CceEEEEecCCCccccCCccccCCCCCcEEECcCCCCCCCCCCc------------------cCCCCCcEEEecCccccC
Q 008707 39 PRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPDM------------------SRLIDLRIVHLENNELTG 100 (557)
Q Consensus 39 ~~l~~L~L~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~------------------~~l~~L~~L~l~~N~l~~ 100 (557)
++|+.|+|++|+|+ .+|..+..+++|+.|+|++|+|+..+..+ ..+++|+.|+|++|+|+
T Consensus 387 ~~L~~L~Ls~N~l~-~lp~~~~~~~~L~~L~Ls~N~l~~l~~~~~~~L~~L~Ls~N~l~~~~~~l~~L~~L~Ls~N~l~- 464 (549)
T 2z81_A 387 KNLTSLDISRNTFH-PMPDSCQWPEKMRFLNLSSTGIRVVKTCIPQTLEVLDVSNNNLDSFSLFLPRLQELYISRNKLK- 464 (549)
T ss_dssp TTCCEEECTTCCCC-CCCSCCCCCTTCCEEECTTSCCSCCCTTSCTTCSEEECCSSCCSCCCCCCTTCCEEECCSSCCS-
T ss_pred CCCCEEECCCCCCc-cCChhhcccccccEEECCCCCcccccchhcCCceEEECCCCChhhhcccCChhcEEECCCCccC-
Confidence 45666666666666 56666666666666666666665433221 25667777777777777
Q ss_pred cCCCccCCCCcccccccccccCCCCCCccc--ccCceeeeecCCCccccc
Q 008707 101 SLPSYMGSLPNLQELHIENNSFVGEIPPAL--LTGKVIFKYDNNPKLHKE 148 (557)
Q Consensus 101 ~~p~~~~~l~~L~~l~l~~N~~~~~~p~~~--~~~~~~~~~~~n~~~~~~ 148 (557)
.+|. ...+++|+.|++++|++++..|..+ ...+..+.+++|++.|++
T Consensus 465 ~ip~-~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~ 513 (549)
T 2z81_A 465 TLPD-ASLFPVLLVMKISRNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSC 513 (549)
T ss_dssp SCCC-GGGCTTCCEEECCSSCCCCCCTTGGGGCTTCCEEECCSSCBCCCH
T ss_pred cCCC-cccCccCCEEecCCCccCCcCHHHHhcCcccCEEEecCCCccCCC
Confidence 6665 3567777777777777774333323 234567788888887763
No 355
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.00 E-value=3.1e-10 Score=104.81 Aligned_cols=101 Identities=16% Similarity=0.206 Sum_probs=56.7
Q ss_pred ceEEEEecCCCccccCCccccCCCCCcEEECcCCCCCCCCCCccCCCCCcEEEecCccccCcCCCccCCCCccccccccc
Q 008707 40 RITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPDMSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELHIEN 119 (557)
Q Consensus 40 ~l~~L~L~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~l~l~~ 119 (557)
+|+.|+|++|+++ .+| .+..+++|+.|+|++|.++.. +.+..+++|+.|+|++|++++..|..+..+++|+.|++++
T Consensus 45 ~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~l~~n~~~~~-~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~Ls~ 121 (197)
T 4ezg_A 45 SLTYITLANINVT-DLT-GIEYAHNIKDLTINNIHATNY-NPISGLSNLERLRIMGKDVTSDKIPNLSGLTSLTLLDISH 121 (197)
T ss_dssp TCCEEEEESSCCS-CCT-TGGGCTTCSEEEEESCCCSCC-GGGTTCTTCCEEEEECTTCBGGGSCCCTTCTTCCEEECCS
T ss_pred CccEEeccCCCcc-ChH-HHhcCCCCCEEEccCCCCCcc-hhhhcCCCCCEEEeECCccCcccChhhcCCCCCCEEEecC
Confidence 4566666666666 555 455666666666666654432 3455566666666666666655555566666666666666
Q ss_pred ccCCCCCCcccc--cCceeeeecCCC
Q 008707 120 NSFVGEIPPALL--TGKVIFKYDNNP 143 (557)
Q Consensus 120 N~~~~~~p~~~~--~~~~~~~~~~n~ 143 (557)
|++++..|..+. ..+..+.+++|.
T Consensus 122 n~i~~~~~~~l~~l~~L~~L~L~~n~ 147 (197)
T 4ezg_A 122 SAHDDSILTKINTLPKVNSIDLSYNG 147 (197)
T ss_dssp SBCBGGGHHHHTTCSSCCEEECCSCT
T ss_pred CccCcHhHHHHhhCCCCCEEEccCCC
Confidence 666543444332 233444555554
No 356
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=98.99 E-value=3.3e-10 Score=107.95 Aligned_cols=105 Identities=22% Similarity=0.244 Sum_probs=85.3
Q ss_pred CCceEEEEecCCC-ccccCCccccCCCCCcEEECcC-CCCCCCCC-CccCCCCCcEEEecCccccCcCCCccCCCCccc-
Q 008707 38 PPRITKIALSGKN-LKGEIPPELKNMEALTELWLDG-NFLTGPLP-DMSRLIDLRIVHLENNELTGSLPSYMGSLPNLQ- 113 (557)
Q Consensus 38 p~~l~~L~L~~n~-l~~~~p~~~~~l~~L~~L~l~~-N~l~~~~~-~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~- 113 (557)
.++|+.|+|++|+ +++..+..|.++++|+.|+|++ |+|++.++ .|.++++|+.|+|++|+++ .+|. +..+++|+
T Consensus 54 l~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~l~~~n~l~~i~~~~f~~l~~L~~L~l~~n~l~-~lp~-~~~l~~L~~ 131 (239)
T 2xwt_C 54 LPNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTYIDPDALKELPLLKFLGIFNTGLK-MFPD-LTKVYSTDI 131 (239)
T ss_dssp CTTCCEEEEECCSSCCEECTTTEESCTTCCEEEEEEETTCCEECTTSEECCTTCCEEEEEEECCC-SCCC-CTTCCBCCS
T ss_pred CCCCcEEeCCCCCCcceeCHhHcCCCcCCcEEECCCCCCeeEcCHHHhCCCCCCCEEeCCCCCCc-cccc-ccccccccc
Confidence 4679999999997 8855555789999999999998 99998887 5889999999999999999 5887 78888887
Q ss_pred --ccccccc-cCCCCCCccccc---Cce-eeeecCCCcc
Q 008707 114 --ELHIENN-SFVGEIPPALLT---GKV-IFKYDNNPKL 145 (557)
Q Consensus 114 --~l~l~~N-~~~~~~p~~~~~---~~~-~~~~~~n~~~ 145 (557)
.|++++| ++. .+|+..+. .+. .+.+++|...
T Consensus 132 L~~L~l~~N~~l~-~i~~~~~~~l~~L~~~L~l~~n~l~ 169 (239)
T 2xwt_C 132 FFILEITDNPYMT-SIPVNAFQGLCNETLTLKLYNNGFT 169 (239)
T ss_dssp EEEEEEESCTTCC-EECTTTTTTTBSSEEEEECCSCCCC
T ss_pred ccEEECCCCcchh-hcCcccccchhcceeEEEcCCCCCc
Confidence 9999999 888 77776554 344 6677777643
No 357
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=98.99 E-value=1.4e-10 Score=115.22 Aligned_cols=105 Identities=15% Similarity=0.221 Sum_probs=64.8
Q ss_pred CCceEEEEecCCCccccCCccccCCCCCcEEECcCCCCCC---CCCC--ccCC---------------------------
Q 008707 38 PPRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTG---PLPD--MSRL--------------------------- 85 (557)
Q Consensus 38 p~~l~~L~L~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~---~~~~--~~~l--------------------------- 85 (557)
.++|+.|+|++|.+++..|..+.++++|+.|+|++|++.+ .++. +..+
T Consensus 144 ~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~l~~~l 223 (310)
T 4glp_A 144 KPGLKVLSIAQAHSPAFSCEQVRAFPALTSLDLSDNPGLGERGLMAALCPHKFPAIQNLALRNTGMETPTGVCAALAAAG 223 (310)
T ss_dssp CSCCCEEEEECCSSCCCCTTSCCCCTTCCEEECCSCTTCHHHHHHTTSCTTSSCCCCSCBCCSSCCCCHHHHHHHHHHHT
T ss_pred ccCCCEEEeeCCCcchhhHHHhccCCCCCEEECCCCCCccchhhhHHHhhhcCCCCCEEECCCCCCCchHHHHHHHHhcC
Confidence 4578888888888886666778888888888888887654 2111 2334
Q ss_pred CCCcEEEecCccccCcCCCccCCC---CcccccccccccCCCCCCcccccCceeeeecCCC
Q 008707 86 IDLRIVHLENNELTGSLPSYMGSL---PNLQELHIENNSFVGEIPPALLTGKVIFKYDNNP 143 (557)
Q Consensus 86 ~~L~~L~l~~N~l~~~~p~~~~~l---~~L~~l~l~~N~~~~~~p~~~~~~~~~~~~~~n~ 143 (557)
++|+.|+|++|+|++..|..+..+ ++|+.|++++|+|+ .+|..++..+..+.+++|.
T Consensus 224 ~~L~~L~Ls~N~l~~~~p~~~~~~~~~~~L~~L~Ls~N~l~-~lp~~~~~~L~~L~Ls~N~ 283 (310)
T 4glp_A 224 VQPHSLDLSHNSLRATVNPSAPRCMWSSALNSLNLSFAGLE-QVPKGLPAKLRVLDLSSNR 283 (310)
T ss_dssp CCCSSEECTTSCCCCCCCSCCSSCCCCTTCCCEECCSSCCC-SCCSCCCSCCSCEECCSCC
T ss_pred CCCCEEECCCCCCCccchhhHHhccCcCcCCEEECCCCCCC-chhhhhcCCCCEEECCCCc
Confidence 455555555555554445555444 45666666666665 5555555555555555554
No 358
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=98.98 E-value=3.8e-10 Score=120.51 Aligned_cols=109 Identities=14% Similarity=0.124 Sum_probs=86.5
Q ss_pred CCCceEEEEecCCCccccCCccccCCCCCcEEECcCCCCCCC--CC-CccCCCCCcEEEecCccccCcCCCc-cCCCCcc
Q 008707 37 TPPRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGP--LP-DMSRLIDLRIVHLENNELTGSLPSY-MGSLPNL 112 (557)
Q Consensus 37 ~p~~l~~L~L~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~--~~-~~~~l~~L~~L~l~~N~l~~~~p~~-~~~l~~L 112 (557)
..++|+.|+|++|.+++.+|..+.++++|+.|+|++|+|++. +| .+..+++|+.|+|++|++++.+|.. +..+++|
T Consensus 322 ~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~L~~L~Ls~N~l~~~l~~~~~~~l~~L 401 (520)
T 2z7x_B 322 KISPFLHLDFSNNLLTDTVFENCGHLTELETLILQMNQLKELSKIAEMTTQMKSLQQLDISQNSVSYDEKKGDCSWTKSL 401 (520)
T ss_dssp SCCCCCEEECCSSCCCTTTTTTCCCCSSCCEEECCSSCCCBHHHHHHHHTTCTTCCEEECCSSCCBCCGGGCSCCCCTTC
T ss_pred hCCcccEEEeECCccChhhhhhhccCCCCCEEEccCCccCccccchHHHhhCCCCCEEECCCCcCCcccccchhccCccC
Confidence 346788899999999887888888888999999999998873 34 4888889999999999988657764 6778888
Q ss_pred cccccccccCCCCCCcccccCceeeeecCCCcc
Q 008707 113 QELHIENNSFVGEIPPALLTGKVIFKYDNNPKL 145 (557)
Q Consensus 113 ~~l~l~~N~~~~~~p~~~~~~~~~~~~~~n~~~ 145 (557)
+.|++++|++++.+|..+...+..+.+++|...
T Consensus 402 ~~L~Ls~N~l~~~~~~~l~~~L~~L~Ls~N~l~ 434 (520)
T 2z7x_B 402 LSLNMSSNILTDTIFRCLPPRIKVLDLHSNKIK 434 (520)
T ss_dssp CEEECCSSCCCGGGGGSCCTTCCEEECCSSCCC
T ss_pred CEEECcCCCCCcchhhhhcccCCEEECCCCccc
Confidence 888888888877777776666677777777543
No 359
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=98.98 E-value=2.2e-10 Score=113.90 Aligned_cols=86 Identities=19% Similarity=0.250 Sum_probs=48.8
Q ss_pred CceEEEEecCCCccccCCccccCCCCCcEEECcCCCCCCC---CCCc--cCCCCCcEEEecCccccC--cCCC-ccCCCC
Q 008707 39 PRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGP---LPDM--SRLIDLRIVHLENNELTG--SLPS-YMGSLP 110 (557)
Q Consensus 39 ~~l~~L~L~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~---~~~~--~~l~~L~~L~l~~N~l~~--~~p~-~~~~l~ 110 (557)
++|++|+|++|++++..|..|.++++|+.|+|++|++.+. ++.+ ..+++|+.|+|++|+|++ .++. .+..++
T Consensus 149 ~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~ 228 (312)
T 1wwl_A 149 PGLKVLSIAQAHSLNFSCEQVRVFPALSTLDLSDNPELGERGLISALCPLKFPTLQVLALRNAGMETPSGVCSALAAARV 228 (312)
T ss_dssp TTCCEEEEESCSCCCCCTTTCCCCSSCCEEECCSCTTCHHHHHHHHSCTTSCTTCCEEECTTSCCCCHHHHHHHHHHTTC
T ss_pred CCCcEEEeeCCCCccchHHHhccCCCCCEEECCCCCcCcchHHHHHHHhccCCCCCEEECCCCcCcchHHHHHHHHhcCC
Confidence 5777777777777766666777777777777777776553 2222 555555555555555551 1111 122344
Q ss_pred cccccccccccCCC
Q 008707 111 NLQELHIENNSFVG 124 (557)
Q Consensus 111 ~L~~l~l~~N~~~~ 124 (557)
+|+.|++++|++.+
T Consensus 229 ~L~~L~Ls~N~l~~ 242 (312)
T 1wwl_A 229 QLQGLDLSHNSLRD 242 (312)
T ss_dssp CCSEEECTTSCCCS
T ss_pred CCCEEECCCCcCCc
Confidence 44555555555443
No 360
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=98.91 E-value=1.4e-09 Score=110.12 Aligned_cols=105 Identities=18% Similarity=0.216 Sum_probs=89.0
Q ss_pred CCceEEEEecCCCccccCCccccCCCCCcEEECcCCCCCCCCCC-ccCCCCCcEEEecCccccCcCCC--ccCCCCcccc
Q 008707 38 PPRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPD-MSRLIDLRIVHLENNELTGSLPS--YMGSLPNLQE 114 (557)
Q Consensus 38 p~~l~~L~L~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~-~~~l~~L~~L~l~~N~l~~~~p~--~~~~l~~L~~ 114 (557)
.++|+.|+|++|++++..|..|.++++|++|+|++|+|++.++. |.++++|+.|+|++|+++ .+|. .+..+++|+.
T Consensus 75 l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~-~l~~~~~~~~l~~L~~ 153 (353)
T 2z80_A 75 CVNLQALVLTSNGINTIEEDSFSSLGSLEHLDLSYNYLSNLSSSWFKPLSSLTFLNLLGNPYK-TLGETSLFSHLTKLQI 153 (353)
T ss_dssp CTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSSCCHHHHTTCTTCSEEECTTCCCS-SSCSSCSCTTCTTCCE
T ss_pred CCCCCEEECCCCccCccCHhhcCCCCCCCEEECCCCcCCcCCHhHhCCCccCCEEECCCCCCc-ccCchhhhccCCCCcE
Confidence 46899999999999977788899999999999999999988875 999999999999999999 6776 7889999999
Q ss_pred ccccccc-CCCCCCccccc---CceeeeecCCCc
Q 008707 115 LHIENNS-FVGEIPPALLT---GKVIFKYDNNPK 144 (557)
Q Consensus 115 l~l~~N~-~~~~~p~~~~~---~~~~~~~~~n~~ 144 (557)
|++++|+ +. .++...+. .+..+.+++|..
T Consensus 154 L~l~~n~~~~-~~~~~~~~~l~~L~~L~l~~n~l 186 (353)
T 2z80_A 154 LRVGNMDTFT-KIQRKDFAGLTFLEELEIDASDL 186 (353)
T ss_dssp EEEEESSSCC-EECTTTTTTCCEEEEEEEEETTC
T ss_pred EECCCCcccc-ccCHHHccCCCCCCEEECCCCCc
Confidence 9999995 55 66654443 345567777754
No 361
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=98.90 E-value=6.2e-10 Score=117.74 Aligned_cols=101 Identities=27% Similarity=0.307 Sum_probs=85.8
Q ss_pred CCceEEEEecCCCccccCCccccCCCCCcEEECcCCCCCCCCCCccCCCCCcEEEecCccccCcCCCccCCCCccccccc
Q 008707 38 PPRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPDMSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELHI 117 (557)
Q Consensus 38 p~~l~~L~L~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~l~l 117 (557)
+++|+.|+|++|.+++..|..|.++++|+.|+|++|.|++.+| |..+++|+.|+|++|.|+ .+|. .++|+.|++
T Consensus 33 ~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~-l~~l~~L~~L~Ls~N~l~-~l~~----~~~L~~L~L 106 (487)
T 3oja_A 33 AWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD-LESLSTLRTLDLNNNYVQ-ELLV----GPSIETLHA 106 (487)
T ss_dssp GGGCCEEECCSSCCCCCCGGGGTTCTTCCEEECTTSCCEEEEE-CTTCTTCCEEECCSSEEE-EEEE----CTTCCEEEC
T ss_pred CCCccEEEeeCCcCCCCCHHHHhCCCCCCEEEeeCCCCCCCcc-cccCCCCCEEEecCCcCC-CCCC----CCCcCEEEC
Confidence 4589999999999997777899999999999999999998777 999999999999999999 4442 378889999
Q ss_pred ccccCCCCCCcccccCceeeeecCCCcc
Q 008707 118 ENNSFVGEIPPALLTGKVIFKYDNNPKL 145 (557)
Q Consensus 118 ~~N~~~~~~p~~~~~~~~~~~~~~n~~~ 145 (557)
++|++. .+|...+..+..+.+++|...
T Consensus 107 ~~N~l~-~~~~~~l~~L~~L~L~~N~l~ 133 (487)
T 3oja_A 107 ANNNIS-RVSCSRGQGKKNIYLANNKIT 133 (487)
T ss_dssp CSSCCC-CEEECCCSSCEEEECCSSCCC
T ss_pred cCCcCC-CCCccccCCCCEEECCCCCCC
Confidence 999988 566666677778888887644
No 362
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=98.89 E-value=3.4e-09 Score=102.58 Aligned_cols=100 Identities=26% Similarity=0.348 Sum_probs=71.5
Q ss_pred CceEEEEecCCCccccCCccccCCCCCcEEECcCCCCCCCCCCccCCCCCcEEEecCccccCcCCCccCCCCcccccccc
Q 008707 39 PRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPDMSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELHIE 118 (557)
Q Consensus 39 ~~l~~L~L~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~l~l~ 118 (557)
++|+.|+|++|.|+ .+|. +.++++|+.|+|++|+|++.++ +.. ++|+.|+|++|+++ .+| .+..+++|+.|+++
T Consensus 63 ~~L~~L~L~~N~i~-~~~~-l~~l~~L~~L~L~~N~l~~l~~-~~~-~~L~~L~L~~N~l~-~~~-~l~~l~~L~~L~Ls 136 (263)
T 1xeu_A 63 TNLKELHLSHNQIS-DLSP-LKDLTKLEELSVNRNRLKNLNG-IPS-ACLSRLFLDNNELR-DTD-SLIHLKNLEILSIR 136 (263)
T ss_dssp TTCCEEECCSSCCC-CCGG-GTTCSSCCEEECCSSCCSCCTT-CCC-SSCCEEECCSSCCS-BSG-GGTTCTTCCEEECT
T ss_pred CCCCEEECCCCccC-CChh-hccCCCCCEEECCCCccCCcCc-ccc-CcccEEEccCCccC-CCh-hhcCcccccEEECC
Confidence 57888888888888 4444 8888888888888888887544 222 77888888888887 444 47788888888888
Q ss_pred cccCCCCCCc-ccccCceeeeecCCCcc
Q 008707 119 NNSFVGEIPP-ALLTGKVIFKYDNNPKL 145 (557)
Q Consensus 119 ~N~~~~~~p~-~~~~~~~~~~~~~n~~~ 145 (557)
+|+++ .+|. .-...+..+.+++|...
T Consensus 137 ~N~i~-~~~~l~~l~~L~~L~L~~N~i~ 163 (263)
T 1xeu_A 137 NNKLK-SIVMLGFLSKLEVLDLHGNEIT 163 (263)
T ss_dssp TSCCC-BCGGGGGCTTCCEEECTTSCCC
T ss_pred CCcCC-CChHHccCCCCCEEECCCCcCc
Confidence 88887 4552 12334566677777644
No 363
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=98.89 E-value=1.5e-09 Score=107.74 Aligned_cols=102 Identities=25% Similarity=0.439 Sum_probs=75.7
Q ss_pred CCceEEEEecCCCccccCCccccCCCCCcEEECcCCCCCCCCCCccCCCCCcEEEecCccccCcCCCccCCCCccccccc
Q 008707 38 PPRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPDMSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELHI 117 (557)
Q Consensus 38 p~~l~~L~L~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~l~l 117 (557)
.++|+.|+|++|++++ +|. +..+++|+.|+|++|++++.++ +..+++|+.|+|++|+++ .+|. +..+++|+.|++
T Consensus 106 l~~L~~L~l~~n~l~~-~~~-l~~l~~L~~L~l~~n~l~~~~~-l~~l~~L~~L~l~~n~l~-~~~~-l~~l~~L~~L~l 180 (308)
T 1h6u_A 106 LQSIKTLDLTSTQITD-VTP-LAGLSNLQVLYLDLNQITNISP-LAGLTNLQYLSIGNAQVS-DLTP-LANLSKLTTLKA 180 (308)
T ss_dssp CTTCCEEECTTSCCCC-CGG-GTTCTTCCEEECCSSCCCCCGG-GGGCTTCCEEECCSSCCC-CCGG-GTTCTTCCEEEC
T ss_pred CCCCCEEECCCCCCCC-chh-hcCCCCCCEEECCCCccCcCcc-ccCCCCccEEEccCCcCC-CChh-hcCCCCCCEEEC
Confidence 4678888888888884 543 8888888888888888887665 778888888888888888 4544 778888888888
Q ss_pred ccccCCCCCCc-ccccCceeeeecCCCcc
Q 008707 118 ENNSFVGEIPP-ALLTGKVIFKYDNNPKL 145 (557)
Q Consensus 118 ~~N~~~~~~p~-~~~~~~~~~~~~~n~~~ 145 (557)
++|++. .+|. .-...+..+.+++|...
T Consensus 181 ~~n~l~-~~~~l~~l~~L~~L~L~~N~l~ 208 (308)
T 1h6u_A 181 DDNKIS-DISPLASLPNLIEVHLKNNQIS 208 (308)
T ss_dssp CSSCCC-CCGGGGGCTTCCEEECTTSCCC
T ss_pred CCCccC-cChhhcCCCCCCEEEccCCccC
Confidence 888887 4543 22334556667777543
No 364
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=98.88 E-value=2.8e-09 Score=105.65 Aligned_cols=102 Identities=27% Similarity=0.433 Sum_probs=84.0
Q ss_pred CCceEEEEecCCCccccCCccccCCCCCcEEECcCCCCCCCCCCccCCCCCcEEEecCccccCcCCCccCCCCccccccc
Q 008707 38 PPRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPDMSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELHI 117 (557)
Q Consensus 38 p~~l~~L~L~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~l~l 117 (557)
.++|+.|+|++|.++ .+| .+..+++|+.|+|++|+|++.+ .+..+++|+.|+|++|+++ .+|. +..+++|+.|++
T Consensus 84 l~~L~~L~L~~n~l~-~~~-~~~~l~~L~~L~l~~n~l~~~~-~l~~l~~L~~L~l~~n~l~-~~~~-l~~l~~L~~L~l 158 (308)
T 1h6u_A 84 LTKITELELSGNPLK-NVS-AIAGLQSIKTLDLTSTQITDVT-PLAGLSNLQVLYLDLNQIT-NISP-LAGLTNLQYLSI 158 (308)
T ss_dssp CCSCCEEECCSCCCS-CCG-GGTTCTTCCEEECTTSCCCCCG-GGTTCTTCCEEECCSSCCC-CCGG-GGGCTTCCEEEC
T ss_pred CCCCCEEEccCCcCC-Cch-hhcCCCCCCEEECCCCCCCCch-hhcCCCCCCEEECCCCccC-cCcc-ccCCCCccEEEc
Confidence 468999999999999 454 6899999999999999999864 4999999999999999999 4554 889999999999
Q ss_pred ccccCCCCCCc-ccccCceeeeecCCCcc
Q 008707 118 ENNSFVGEIPP-ALLTGKVIFKYDNNPKL 145 (557)
Q Consensus 118 ~~N~~~~~~p~-~~~~~~~~~~~~~n~~~ 145 (557)
++|++. .+|. .-...+..+.+++|...
T Consensus 159 ~~n~l~-~~~~l~~l~~L~~L~l~~n~l~ 186 (308)
T 1h6u_A 159 GNAQVS-DLTPLANLSKLTTLKADDNKIS 186 (308)
T ss_dssp CSSCCC-CCGGGTTCTTCCEEECCSSCCC
T ss_pred cCCcCC-CChhhcCCCCCCEEECCCCccC
Confidence 999998 5665 22345567778887643
No 365
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=98.88 E-value=1.8e-09 Score=107.09 Aligned_cols=105 Identities=18% Similarity=0.215 Sum_probs=86.1
Q ss_pred CceEEEEecCCCccccCCccc--cCCCCCcEEECcCCCCCCCCCC-----ccCCCCCcEEEecCccccCcCCCccCCCCc
Q 008707 39 PRITKIALSGKNLKGEIPPEL--KNMEALTELWLDGNFLTGPLPD-----MSRLIDLRIVHLENNELTGSLPSYMGSLPN 111 (557)
Q Consensus 39 ~~l~~L~L~~n~l~~~~p~~~--~~l~~L~~L~l~~N~l~~~~~~-----~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~ 111 (557)
++|+.|+|++|.+++..|..+ ..+++|++|+|++|++++..+. +..+++|+.|+|++|++++..|..+..+++
T Consensus 91 ~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~ 170 (310)
T 4glp_A 91 SRLKELTLEDLKITGTMPPLPLEATGLALSSLRLRNVSWATGRSWLAELQQWLKPGLKVLSIAQAHSPAFSCEQVRAFPA 170 (310)
T ss_dssp SCCCEEEEESCCCBSCCCCCSSSCCCBCCSSCEEESCCCSSTTSSHHHHHTTBCSCCCEEEEECCSSCCCCTTSCCCCTT
T ss_pred CceeEEEeeCCEeccchhhhhhhccCCCCCEEEeecccccchhhhhHHHHhhhccCCCEEEeeCCCcchhhHHHhccCCC
Confidence 348999999999999999888 8999999999999999986552 457999999999999999777788999999
Q ss_pred ccccccccccCCCC--CCccc----ccCceeeeecCCC
Q 008707 112 LQELHIENNSFVGE--IPPAL----LTGKVIFKYDNNP 143 (557)
Q Consensus 112 L~~l~l~~N~~~~~--~p~~~----~~~~~~~~~~~n~ 143 (557)
|+.|++++|++.+. ++... +..+..+.+++|.
T Consensus 171 L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~ 208 (310)
T 4glp_A 171 LTSLDLSDNPGLGERGLMAALCPHKFPAIQNLALRNTG 208 (310)
T ss_dssp CCEEECCSCTTCHHHHHHTTSCTTSSCCCCSCBCCSSC
T ss_pred CCEEECCCCCCccchhhhHHHhhhcCCCCCEEECCCCC
Confidence 99999999998642 33222 3345666777775
No 366
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=98.87 E-value=3.9e-09 Score=102.13 Aligned_cols=100 Identities=20% Similarity=0.292 Sum_probs=84.4
Q ss_pred CceEEEEecCCCccccCCccccCCCCCcEEECcCCCCCCCCCCccCCCCCcEEEecCccccCcCCCccCCCCcccccccc
Q 008707 39 PRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPDMSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELHIE 118 (557)
Q Consensus 39 ~~l~~L~L~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~l~l~ 118 (557)
++|+.|+|++|+++ .+| .+..+++|+.|+|++|+|++.++ +..+++|+.|+|++|+++ .+|.... ++|+.|+++
T Consensus 41 ~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~L~~N~i~~~~~-l~~l~~L~~L~L~~N~l~-~l~~~~~--~~L~~L~L~ 114 (263)
T 1xeu_A 41 SGVQNFNGDNSNIQ-SLA-GMQFFTNLKELHLSHNQISDLSP-LKDLTKLEELSVNRNRLK-NLNGIPS--ACLSRLFLD 114 (263)
T ss_dssp TTCSEEECTTSCCC-CCT-TGGGCTTCCEEECCSSCCCCCGG-GTTCSSCCEEECCSSCCS-CCTTCCC--SSCCEEECC
T ss_pred CcCcEEECcCCCcc-cch-HHhhCCCCCEEECCCCccCCChh-hccCCCCCEEECCCCccC-CcCcccc--CcccEEEcc
Confidence 67999999999999 777 78999999999999999999888 999999999999999999 5776433 899999999
Q ss_pred cccCCCCCCc-ccccCceeeeecCCCcc
Q 008707 119 NNSFVGEIPP-ALLTGKVIFKYDNNPKL 145 (557)
Q Consensus 119 ~N~~~~~~p~-~~~~~~~~~~~~~n~~~ 145 (557)
+|+++ .+|. .-...+..+.+++|...
T Consensus 115 ~N~l~-~~~~l~~l~~L~~L~Ls~N~i~ 141 (263)
T 1xeu_A 115 NNELR-DTDSLIHLKNLEILSIRNNKLK 141 (263)
T ss_dssp SSCCS-BSGGGTTCTTCCEEECTTSCCC
T ss_pred CCccC-CChhhcCcccccEEECCCCcCC
Confidence 99999 5653 12345667788888643
No 367
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=98.87 E-value=2.8e-09 Score=104.77 Aligned_cols=99 Identities=30% Similarity=0.479 Sum_probs=58.8
Q ss_pred CceEEEEecCCCccccCCccccCCCCCcEEECcCCCCCCCCCCccCCCCCcEEEecCccccCcCCCccCCCCcccccccc
Q 008707 39 PRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPDMSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELHIE 118 (557)
Q Consensus 39 ~~l~~L~L~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~l~l~ 118 (557)
++|+.|+|++|++++ ++. +.++++|+.|+|++|+|++. +.+..+++|+.|+|++|+++ .++ .+..+++|+.|+++
T Consensus 68 ~~L~~L~L~~n~l~~-~~~-l~~l~~L~~L~l~~n~l~~~-~~l~~l~~L~~L~L~~n~i~-~~~-~l~~l~~L~~L~l~ 142 (291)
T 1h6t_A 68 PNVTKLFLNGNKLTD-IKP-LANLKNLGWLFLDENKVKDL-SSLKDLKKLKSLSLEHNGIS-DIN-GLVHLPQLESLYLG 142 (291)
T ss_dssp TTCCEEECCSSCCCC-CGG-GTTCTTCCEEECCSSCCCCG-GGGTTCTTCCEEECTTSCCC-CCG-GGGGCTTCCEEECC
T ss_pred CCCCEEEccCCccCC-Ccc-cccCCCCCEEECCCCcCCCC-hhhccCCCCCEEECCCCcCC-CCh-hhcCCCCCCEEEcc
Confidence 567777777777773 333 66677777777777776653 34666666777777777666 333 35566666666666
Q ss_pred cccCCCCCCc-ccccCceeeeecCCC
Q 008707 119 NNSFVGEIPP-ALLTGKVIFKYDNNP 143 (557)
Q Consensus 119 ~N~~~~~~p~-~~~~~~~~~~~~~n~ 143 (557)
+|++. .++. .-...+..+.+++|.
T Consensus 143 ~n~l~-~~~~l~~l~~L~~L~L~~N~ 167 (291)
T 1h6t_A 143 NNKIT-DITVLSRLTKLDTLSLEDNQ 167 (291)
T ss_dssp SSCCC-CCGGGGGCTTCSEEECCSSC
T ss_pred CCcCC-cchhhccCCCCCEEEccCCc
Confidence 66666 3321 112234444555553
No 368
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=98.87 E-value=1.6e-09 Score=109.18 Aligned_cols=104 Identities=18% Similarity=0.326 Sum_probs=67.6
Q ss_pred CCceEEEEecCCCccccCCccccCCCCCcEEECcCCCCCCCCCCccCCCCCcEEEecCccccCcCCCccCCCCccccccc
Q 008707 38 PPRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPDMSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELHI 117 (557)
Q Consensus 38 p~~l~~L~L~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~l~l 117 (557)
.++|+.|+|++|.++ .+|. +..+++|+.|+|++|.+++. +.+..+++|+.|++++|+++ .+| .+..+++|+.|++
T Consensus 220 ~~~L~~L~l~~n~l~-~~~~-~~~l~~L~~L~l~~n~l~~~-~~~~~l~~L~~L~l~~n~l~-~~~-~~~~l~~L~~L~L 294 (347)
T 4fmz_A 220 MTRLNSLKIGNNKIT-DLSP-LANLSQLTWLEIGTNQISDI-NAVKDLTKLKMLNVGSNQIS-DIS-VLNNLSQLNSLFL 294 (347)
T ss_dssp CTTCCEEECCSSCCC-CCGG-GTTCTTCCEEECCSSCCCCC-GGGTTCTTCCEEECCSSCCC-CCG-GGGGCTTCSEEEC
T ss_pred CCcCCEEEccCCccC-CCcc-hhcCCCCCEEECCCCccCCC-hhHhcCCCcCEEEccCCccC-CCh-hhcCCCCCCEEEC
Confidence 356777777777777 3443 67777777777777777764 45677777777777777777 343 3666777777777
Q ss_pred ccccCCCCCCcccc--cCceeeeecCCCccc
Q 008707 118 ENNSFVGEIPPALL--TGKVIFKYDNNPKLH 146 (557)
Q Consensus 118 ~~N~~~~~~p~~~~--~~~~~~~~~~n~~~~ 146 (557)
++|++.+..|..+. ..+..+.+++|+...
T Consensus 295 ~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~ 325 (347)
T 4fmz_A 295 NNNQLGNEDMEVIGGLTNLTTLFLSQNHITD 325 (347)
T ss_dssp CSSCCCGGGHHHHHTCTTCSEEECCSSSCCC
T ss_pred cCCcCCCcChhHhhccccCCEEEccCCcccc
Confidence 77777644443332 344556666666443
No 369
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=98.86 E-value=6.3e-10 Score=110.88 Aligned_cols=101 Identities=27% Similarity=0.307 Sum_probs=85.7
Q ss_pred CCceEEEEecCCCccccCCccccCCCCCcEEECcCCCCCCCCCCccCCCCCcEEEecCccccCcCCCccCCCCccccccc
Q 008707 38 PPRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPDMSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELHI 117 (557)
Q Consensus 38 p~~l~~L~L~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~l~l 117 (557)
+++|+.|+|++|.+++..|..|.++++|+.|+|++|++++.++ |..+++|+.|+|++|+|+ .+| .+++|+.|++
T Consensus 33 ~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~-~~~l~~L~~L~Ls~n~l~-~l~----~~~~L~~L~l 106 (317)
T 3o53_A 33 AWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD-LESLSTLRTLDLNNNYVQ-ELL----VGPSIETLHA 106 (317)
T ss_dssp GGGCSEEECTTSCCCCCCHHHHTTCTTCCEEECTTSCCEEEEE-ETTCTTCCEEECCSSEEE-EEE----ECTTCCEEEC
T ss_pred CCCCCEEECcCCccCcCCHHHhhCCCcCCEEECCCCcCCcchh-hhhcCCCCEEECcCCccc-ccc----CCCCcCEEEC
Confidence 4689999999999997667889999999999999999998776 999999999999999999 444 3478999999
Q ss_pred ccccCCCCCCcccccCceeeeecCCCcc
Q 008707 118 ENNSFVGEIPPALLTGKVIFKYDNNPKL 145 (557)
Q Consensus 118 ~~N~~~~~~p~~~~~~~~~~~~~~n~~~ 145 (557)
++|++. .++...+..+..+.+++|...
T Consensus 107 ~~n~l~-~~~~~~~~~L~~L~l~~N~l~ 133 (317)
T 3o53_A 107 ANNNIS-RVSCSRGQGKKNIYLANNKIT 133 (317)
T ss_dssp CSSCCS-EEEECCCSSCEEEECCSSCCC
T ss_pred CCCccC-CcCccccCCCCEEECCCCCCC
Confidence 999998 666666777888888888654
No 370
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=98.85 E-value=2.8e-09 Score=104.74 Aligned_cols=101 Identities=25% Similarity=0.334 Sum_probs=70.0
Q ss_pred CCceEEEEecCCCccccCCccccCCCCCcEEECcCCCCCCCCCCccCCCCCcEEEecCccccCcCCCccCCCCccccccc
Q 008707 38 PPRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPDMSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELHI 117 (557)
Q Consensus 38 p~~l~~L~L~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~l~l 117 (557)
.++|+.|+|++|.+++ +| .+..+++|+.|+|++|+|++. +.+..+++|+.|+|++|++++ + ..+..+++|+.|++
T Consensus 89 l~~L~~L~l~~n~l~~-~~-~l~~l~~L~~L~L~~n~i~~~-~~l~~l~~L~~L~l~~n~l~~-~-~~l~~l~~L~~L~L 163 (291)
T 1h6t_A 89 LKNLGWLFLDENKVKD-LS-SLKDLKKLKSLSLEHNGISDI-NGLVHLPQLESLYLGNNKITD-I-TVLSRLTKLDTLSL 163 (291)
T ss_dssp CTTCCEEECCSSCCCC-GG-GGTTCTTCCEEECTTSCCCCC-GGGGGCTTCCEEECCSSCCCC-C-GGGGGCTTCSEEEC
T ss_pred CCCCCEEECCCCcCCC-Ch-hhccCCCCCEEECCCCcCCCC-hhhcCCCCCCEEEccCCcCCc-c-hhhccCCCCCEEEc
Confidence 3677888888888873 44 377788888888888888774 567777888888888888773 4 45677777888888
Q ss_pred ccccCCCCCCc-ccccCceeeeecCCCc
Q 008707 118 ENNSFVGEIPP-ALLTGKVIFKYDNNPK 144 (557)
Q Consensus 118 ~~N~~~~~~p~-~~~~~~~~~~~~~n~~ 144 (557)
++|++. .+++ .-...+..+.+++|..
T Consensus 164 ~~N~l~-~~~~l~~l~~L~~L~L~~N~i 190 (291)
T 1h6t_A 164 EDNQIS-DIVPLAGLTKLQNLYLSKNHI 190 (291)
T ss_dssp CSSCCC-CCGGGTTCTTCCEEECCSSCC
T ss_pred cCCccc-cchhhcCCCccCEEECCCCcC
Confidence 888777 3433 2223445566666643
No 371
>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A
Probab=98.84 E-value=8.1e-10 Score=109.36 Aligned_cols=183 Identities=22% Similarity=0.243 Sum_probs=119.8
Q ss_pred cccCCCCceEEEEEEEcCCcEEEEEEccCccchhHHHHHHHHHHHhhcC-CCC--ccceeeEEEecC---eeEEEEEecC
Q 008707 241 KKIGKGSFGSVYYGKMKDGKEVAVKIMADSCSHRTQQFVTEVALLSRIH-HRN--LVPLIGYCEEEH---QRILVYEYMH 314 (557)
Q Consensus 241 ~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~il~~l~-h~n--Iv~~~~~~~~~~---~~~lv~e~~~ 314 (557)
+.++.|....||+.. ..+++|+.... .....+.+|.++++.+. +.. +..++......+ ..++||++++
T Consensus 26 ~~~~~G~~n~v~~v~----~~~vlR~~~~~--~~~~~~~~E~~~l~~l~~~~~v~vP~~~~~~~~~~~~~~~~~vm~~i~ 99 (304)
T 3sg8_A 26 EISGEGNDCIAYEIN----RDFIFKFPKHS--RGSTNLFNEVNILKRIHNKLPLPIPEVVFTGMPSETYQMSFAGFTKIK 99 (304)
T ss_dssp CEEEECSSEEEEEST----TSEEEEEESSH--HHHHHHHHHHHHHHHHTTSSSSCCCCEEEECCCCSSCSCSCEEEECCC
T ss_pred EecCCCCcceEEEEC----CEEEEEecCCc--chHHHHHHHHHHHHHHHhcCCCCCCceEeecCCCCCCCcceEEEcccC
Confidence 458899999999874 56889985432 34567889999999883 333 344444433333 3478999999
Q ss_pred CCChhhhhhccCCCCCcCHHHHHHHHHHHHHHHHHHHcC-----------------------------------------
Q 008707 315 NGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTG----------------------------------------- 353 (557)
Q Consensus 315 ~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~----------------------------------------- 353 (557)
|.++.+... ..++..+...++.++++.++.||+.
T Consensus 100 G~~l~~~~~-----~~l~~~~~~~~~~~l~~~la~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 174 (304)
T 3sg8_A 100 GVPLTPLLL-----NNLPKQSQNQAAKDLARFLSELHSINISGFKSNLVLDFREKINEDNKKIKKLLSRELKGPQMKKVD 174 (304)
T ss_dssp CEECCHHHH-----HTSCHHHHHHHHHHHHHHHHHHHHSCCTTSCGGGBCCHHHHHHHHHHHHHHHHTTTSCHHHHHHHH
T ss_pred CeECCcccc-----ccCCHHHHHHHHHHHHHHHHHHHcCCCCCCCccchhhHHHHHHHHHHHHHHHhcccCCcccHHHHH
Confidence 988765332 2356667778888888888888851
Q ss_pred --------------CCCCeEeeccCCCCEEeCC--CCcEEEecccCccccCCCCccccccccCCCCc---cCCcccCC--
Q 008707 354 --------------CNPGIIHRDVKSSNILLDI--NMRAKVSDFGLSRQAEEDLTHISSVARGTVGY---LDPEYYGN-- 412 (557)
Q Consensus 354 --------------~~~~ivH~dlk~~NIll~~--~~~~kl~Dfgla~~~~~~~~~~~~~~~g~~~y---~aPE~l~~-- 412 (557)
....++|+|+++.||++++ +..+.|+||+.+........... ...+ ..|+....
T Consensus 175 ~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~iD~~~~~~~~~~~Dl~~-----~~~~~~~~~~~~~~~~l 249 (304)
T 3sg8_A 175 DFYRDILENEIYFKYYPCLIHNDFSSDHILFDTEKNTICGIIDFGDAAISDPDNDFIS-----LMEDDEEYGMEFVSKIL 249 (304)
T ss_dssp HHHHHHHTCGGGTCCCCEEECSCCCGGGEEEETTTTEEEEECCCTTCEEECTTHHHHT-----TCCTTTSCCHHHHHHHH
T ss_pred HHHHHHHhccccccCCceeEeCCCCcccEEEeCCCCCEEEEEeCCCCccCChHHHHHH-----HHhhccccCHHHHHHHH
Confidence 0135899999999999998 45678999998765422111100 0000 12221100
Q ss_pred ---CCC---------CcccceehhHHHHHHHHhCCCCCC
Q 008707 413 ---QQL---------TEKSDVYSFGVVLLELISGKKPVS 439 (557)
Q Consensus 413 ---~~~---------s~~~DvwslG~ll~elltg~~pf~ 439 (557)
+.. ....+.|+++.++|.+.+|..+|-
T Consensus 250 ~~Y~~~~~~~~~~r~~~~~~~~~l~~~~~~~~~g~~~~~ 288 (304)
T 3sg8_A 250 NHYKHKDIPTVLEKYRMKEKYWSFEKIIYGKEYGYMDWY 288 (304)
T ss_dssp HHHTCSCHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHH
T ss_pred HHcCCCCcHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHH
Confidence 000 113589999999999999987763
No 372
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=98.82 E-value=4.3e-11 Score=110.69 Aligned_cols=103 Identities=25% Similarity=0.237 Sum_probs=79.7
Q ss_pred CceEEEEecCCCccccCCccccCCCCCcEEECcCCCCCCCCCCccCCCCCcEEEecCccccCcCCCccCCCCcccccccc
Q 008707 39 PRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPDMSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELHIE 118 (557)
Q Consensus 39 ~~l~~L~L~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~l~l~ 118 (557)
++|+.|+|++|.+++ +| .+.++++|+.|+|++|+|+.+++.+..+++|+.|+|++|+++ .+| .+..+++|+.|+++
T Consensus 48 ~~L~~L~ls~n~l~~-l~-~~~~l~~L~~L~l~~n~l~~l~~~~~~~~~L~~L~L~~N~l~-~l~-~~~~l~~L~~L~l~ 123 (198)
T 1ds9_A 48 KACKHLALSTNNIEK-IS-SLSGMENLRILSLGRNLIKKIENLDAVADTLEELWISYNQIA-SLS-GIEKLVNLRVLYMS 123 (198)
T ss_dssp TTCSEEECSEEEESC-CC-CHHHHTTCCEEEEEEEEECSCSSHHHHHHHCSEEEEEEEECC-CHH-HHHHHHHSSEEEES
T ss_pred CCCCEEECCCCCCcc-cc-ccccCCCCCEEECCCCCcccccchhhcCCcCCEEECcCCcCC-cCC-ccccCCCCCEEECC
Confidence 578899999999884 77 888888999999999998865545777788999999999988 466 57788889999999
Q ss_pred cccCCCCCCc--cc--ccCceeeeecCCCccc
Q 008707 119 NNSFVGEIPP--AL--LTGKVIFKYDNNPKLH 146 (557)
Q Consensus 119 ~N~~~~~~p~--~~--~~~~~~~~~~~n~~~~ 146 (557)
+|++. .+|. .+ ...+..+.+.+|+..+
T Consensus 124 ~N~i~-~~~~~~~l~~l~~L~~L~l~~N~l~~ 154 (198)
T 1ds9_A 124 NNKIT-NWGEIDKLAALDKLEDLLLAGNPLYN 154 (198)
T ss_dssp EEECC-CHHHHHHHTTTTTCSEEEECSCHHHH
T ss_pred CCcCC-chhHHHHHhcCCCCCEEEecCCcccc
Confidence 99888 5554 22 3345667778887543
No 373
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=98.82 E-value=7.4e-09 Score=110.96 Aligned_cols=93 Identities=22% Similarity=0.323 Sum_probs=61.7
Q ss_pred ceEEEEecCCCccccCCccccCCCCCcEEECcCCCCCCCCCCccCCCCCcEEEecCccccCcCCCccCCCCccccccccc
Q 008707 40 RITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPDMSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELHIEN 119 (557)
Q Consensus 40 ~l~~L~L~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~l~l~~ 119 (557)
+|+.|+|++|.|++ +|. .+++|+.|+|++|+|+++++ .+++|+.|+|++|+|+ .+|. |. ++|+.|++++
T Consensus 121 ~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~l~~lp~---~l~~L~~L~Ls~N~L~-~lp~-l~--~~L~~L~Ls~ 189 (571)
T 3cvr_A 121 SLKHLDVDNNQLTM-LPE---LPALLEYINADNNQLTMLPE---LPTSLEVLSVRNNQLT-FLPE-LP--ESLEALDVST 189 (571)
T ss_dssp TCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSCCCC---CCTTCCEEECCSSCCS-CCCC-CC--TTCCEEECCS
T ss_pred CCCEEECCCCcCCC-CCC---cCccccEEeCCCCccCcCCC---cCCCcCEEECCCCCCC-Ccch-hh--CCCCEEECcC
Confidence 45555555555553 444 45667777777777776443 5678888888888888 4777 55 7888888888
Q ss_pred ccCCCCCCcccccCc-------eeeeecCCCcc
Q 008707 120 NSFVGEIPPALLTGK-------VIFKYDNNPKL 145 (557)
Q Consensus 120 N~~~~~~p~~~~~~~-------~~~~~~~n~~~ 145 (557)
|+|+ .+|. +...+ ..+.+++|...
T Consensus 190 N~L~-~lp~-~~~~L~~~~~~L~~L~Ls~N~l~ 220 (571)
T 3cvr_A 190 NLLE-SLPA-VPVRNHHSEETEIFFRCRENRIT 220 (571)
T ss_dssp SCCS-SCCC-CC--------CCEEEECCSSCCC
T ss_pred CCCC-chhh-HHHhhhcccccceEEecCCCcce
Confidence 8887 7877 55555 66677777544
No 374
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=98.81 E-value=8.8e-09 Score=110.35 Aligned_cols=93 Identities=27% Similarity=0.370 Sum_probs=69.3
Q ss_pred CCceEEEEecCCCccccCCccccCCCCCcEEECcCCCCCCCCCCccCCCCCcEEEecCccccCcCCCccCCCCccccccc
Q 008707 38 PPRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPDMSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELHI 117 (557)
Q Consensus 38 p~~l~~L~L~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~l~l 117 (557)
+++|+.|+|++|+|+ .+| ..+++|+.|+|++|+|+++++ |.+ +|+.|+|++|+|++ +|. .+++|+.|++
T Consensus 79 ~~~L~~L~Ls~N~l~-~ip---~~l~~L~~L~Ls~N~l~~ip~-l~~--~L~~L~Ls~N~l~~-lp~---~l~~L~~L~L 147 (571)
T 3cvr_A 79 PPQITVLEITQNALI-SLP---ELPASLEYLDACDNRLSTLPE-LPA--SLKHLDVDNNQLTM-LPE---LPALLEYINA 147 (571)
T ss_dssp CTTCSEEECCSSCCS-CCC---CCCTTCCEEECCSSCCSCCCC-CCT--TCCEEECCSSCCSC-CCC---CCTTCCEEEC
T ss_pred cCCCCEEECcCCCCc-ccc---cccCCCCEEEccCCCCCCcch-hhc--CCCEEECCCCcCCC-CCC---cCccccEEeC
Confidence 457899999999999 788 457889999999999888555 554 78888888888884 666 4677777777
Q ss_pred ccccCCCCCCcccccCceeeeecCCC
Q 008707 118 ENNSFVGEIPPALLTGKVIFKYDNNP 143 (557)
Q Consensus 118 ~~N~~~~~~p~~~~~~~~~~~~~~n~ 143 (557)
++|+|+ .+|. ....+..+.+++|.
T Consensus 148 s~N~l~-~lp~-~l~~L~~L~Ls~N~ 171 (571)
T 3cvr_A 148 DNNQLT-MLPE-LPTSLEVLSVRNNQ 171 (571)
T ss_dssp CSSCCS-CCCC-CCTTCCEEECCSSC
T ss_pred CCCccC-cCCC-cCCCcCEEECCCCC
Confidence 777777 4666 44455566666664
No 375
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=98.80 E-value=7.1e-09 Score=112.19 Aligned_cols=80 Identities=31% Similarity=0.505 Sum_probs=45.6
Q ss_pred CceEEEEecCCCccccCCccccCCCCCcEEECcCCCCCCCCCCccCCCCCcEEEecCccccCcCCCccCCCCcccccccc
Q 008707 39 PRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPDMSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELHIE 118 (557)
Q Consensus 39 ~~l~~L~L~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~l~l~ 118 (557)
++|+.|+|++|.|++..| +..|++|+.|+|++|+|+++ |.+..+++|+.|+|++|+|+ .+| .+..|++|+.|+|+
T Consensus 65 ~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~l-~~l~~l~~L~~L~Ls~N~l~-~l~-~l~~l~~L~~L~Ls 139 (605)
T 1m9s_A 65 PNVTKLFLNGNKLTDIKP--LTNLKNLGWLFLDENKIKDL-SSLKDLKKLKSLSLEHNGIS-DIN-GLVHLPQLESLYLG 139 (605)
T ss_dssp TTCCEEECTTSCCCCCGG--GGGCTTCCEEECCSSCCCCC-TTSTTCTTCCEEECTTSCCC-CCG-GGGGCTTCSEEECC
T ss_pred CCCCEEEeeCCCCCCChh--hccCCCCCEEECcCCCCCCC-hhhccCCCCCEEEecCCCCC-CCc-cccCCCccCEEECC
Confidence 456666666666663322 55666666666666666552 35555666666666666655 233 25555555555555
Q ss_pred cccCC
Q 008707 119 NNSFV 123 (557)
Q Consensus 119 ~N~~~ 123 (557)
+|++.
T Consensus 140 ~N~l~ 144 (605)
T 1m9s_A 140 NNKIT 144 (605)
T ss_dssp SSCCC
T ss_pred CCccC
Confidence 55555
No 376
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=98.80 E-value=7.7e-09 Score=111.91 Aligned_cols=100 Identities=24% Similarity=0.341 Sum_probs=61.7
Q ss_pred CceEEEEecCCCccccCCccccCCCCCcEEECcCCCCCCCCCCccCCCCCcEEEecCccccCcCCCccCCCCcccccccc
Q 008707 39 PRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPDMSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELHIE 118 (557)
Q Consensus 39 ~~l~~L~L~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~l~l~ 118 (557)
++|+.|+|++|.|+ .+| .+..|++|+.|+|++|+|+++ +.+..+++|+.|+|++|+|++ + ..+..|++|+.|+|+
T Consensus 87 ~~L~~L~Ls~N~l~-~l~-~l~~l~~L~~L~Ls~N~l~~l-~~l~~l~~L~~L~Ls~N~l~~-l-~~l~~l~~L~~L~Ls 161 (605)
T 1m9s_A 87 KNLGWLFLDENKIK-DLS-SLKDLKKLKSLSLEHNGISDI-NGLVHLPQLESLYLGNNKITD-I-TVLSRLTKLDTLSLE 161 (605)
T ss_dssp TTCCEEECCSSCCC-CCT-TSTTCTTCCEEECTTSCCCCC-GGGGGCTTCSEEECCSSCCCC-C-GGGGSCTTCSEEECC
T ss_pred CCCCEEECcCCCCC-CCh-hhccCCCCCEEEecCCCCCCC-ccccCCCccCEEECCCCccCC-c-hhhcccCCCCEEECc
Confidence 56777777777776 344 566677777777777777653 456666777777777777663 3 346666667777777
Q ss_pred cccCCCCCCcccccCceeeeecCCC
Q 008707 119 NNSFVGEIPPALLTGKVIFKYDNNP 143 (557)
Q Consensus 119 ~N~~~~~~p~~~~~~~~~~~~~~n~ 143 (557)
+|+|.+..|-.-+..+..+.+++|.
T Consensus 162 ~N~l~~~~~l~~l~~L~~L~Ls~N~ 186 (605)
T 1m9s_A 162 DNQISDIVPLAGLTKLQNLYLSKNH 186 (605)
T ss_dssp SSCCCCCGGGTTCTTCCEEECCSSC
T ss_pred CCcCCCchhhccCCCCCEEECcCCC
Confidence 7766643332223344455555554
No 377
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=98.77 E-value=1.4e-08 Score=106.31 Aligned_cols=95 Identities=26% Similarity=0.265 Sum_probs=47.0
Q ss_pred CceEEEEecCCCccccCCccccCCCCCcEEECcCCCCCCCCCCccCCCCCcEEEecCccccCcCCCccCCCCcccccccc
Q 008707 39 PRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPDMSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELHIE 118 (557)
Q Consensus 39 ~~l~~L~L~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~l~l~ 118 (557)
++|+.|+|++|+|++ +| ++.+++|+.|+|++|+|++.. ++++++|+.|+|++|++++ +| ++.+++|+.|+++
T Consensus 64 ~~L~~L~Ls~n~l~~-~~--~~~l~~L~~L~Ls~N~l~~~~--~~~l~~L~~L~L~~N~l~~-l~--~~~l~~L~~L~l~ 135 (457)
T 3bz5_A 64 TGLTKLICTSNNITT-LD--LSQNTNLTYLACDSNKLTNLD--VTPLTKLTYLNCDTNKLTK-LD--VSQNPLLTYLNCA 135 (457)
T ss_dssp TTCSEEECCSSCCSC-CC--CTTCTTCSEEECCSSCCSCCC--CTTCTTCCEEECCSSCCSC-CC--CTTCTTCCEEECT
T ss_pred CCCCEEEccCCcCCe-Ec--cccCCCCCEEECcCCCCceee--cCCCCcCCEEECCCCcCCe-ec--CCCCCcCCEEECC
Confidence 345555555555553 33 455555555555555555531 5555555555555555552 33 4555555555555
Q ss_pred cccCCCCCCcccccCceeeeecCC
Q 008707 119 NNSFVGEIPPALLTGKVIFKYDNN 142 (557)
Q Consensus 119 ~N~~~~~~p~~~~~~~~~~~~~~n 142 (557)
+|+++ .+|-.-...+..+.+++|
T Consensus 136 ~N~l~-~l~l~~l~~L~~L~l~~n 158 (457)
T 3bz5_A 136 RNTLT-EIDVSHNTQLTELDCHLN 158 (457)
T ss_dssp TSCCS-CCCCTTCTTCCEEECTTC
T ss_pred CCccc-eeccccCCcCCEEECCCC
Confidence 55555 244333333444444444
No 378
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=98.73 E-value=9.7e-09 Score=107.99 Aligned_cols=80 Identities=33% Similarity=0.472 Sum_probs=49.6
Q ss_pred CceEEEEecCCCccccCCccccCCCCCcEEECcCCCCCCCCCCccCCCCCcEEEecCccccCcCCCccCCCCcccccccc
Q 008707 39 PRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPDMSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELHIE 118 (557)
Q Consensus 39 ~~l~~L~L~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~l~l~ 118 (557)
++|+.|+|++|.+++ +|. +..+++|+.|+|++|++++.++ +..+++|+.|+|++|++++..| +..+++|+.|+++
T Consensus 265 ~~L~~L~l~~n~l~~-~~~-~~~l~~L~~L~L~~n~l~~~~~-~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~l~ 339 (466)
T 1o6v_A 265 TKLTELKLGANQISN-ISP-LAGLTALTNLELNENQLEDISP-ISNLKNLTYLTLYFNNISDISP--VSSLTKLQRLFFY 339 (466)
T ss_dssp TTCSEEECCSSCCCC-CGG-GTTCTTCSEEECCSSCCSCCGG-GGGCTTCSEEECCSSCCSCCGG--GGGCTTCCEEECC
T ss_pred CCCCEEECCCCccCc-ccc-ccCCCccCeEEcCCCcccCchh-hcCCCCCCEEECcCCcCCCchh--hccCccCCEeECC
Confidence 566777777777763 332 6666666666666666666544 5566666666666666664444 4555666666666
Q ss_pred cccCC
Q 008707 119 NNSFV 123 (557)
Q Consensus 119 ~N~~~ 123 (557)
+|++.
T Consensus 340 ~n~l~ 344 (466)
T 1o6v_A 340 NNKVS 344 (466)
T ss_dssp SSCCC
T ss_pred CCccC
Confidence 66655
No 379
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=98.72 E-value=1.5e-08 Score=106.52 Aligned_cols=99 Identities=27% Similarity=0.363 Sum_probs=44.0
Q ss_pred ceEEEEecCCCccccCCccccCCCCCcEEECcCCCCCCCCCCccCCCCCcEEEecCccccCcCCCccCCCCccccccccc
Q 008707 40 RITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPDMSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELHIEN 119 (557)
Q Consensus 40 ~l~~L~L~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~l~l~~ 119 (557)
+|+.|+|++|.+++..| +..+++|+.|+|++|++++.++ +..+++|+.|+|++|++++..| +..+++|+.|++++
T Consensus 244 ~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~-~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~L~~ 318 (466)
T 1o6v_A 244 NLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISNISP-LAGLTALTNLELNENQLEDISP--ISNLKNLTYLTLYF 318 (466)
T ss_dssp TCSEEECCSSCCCCCGG--GTTCTTCSEEECCSSCCCCCGG-GTTCTTCSEEECCSSCCSCCGG--GGGCTTCSEEECCS
T ss_pred CCCEEECCCCccccchh--hhcCCCCCEEECCCCccCcccc-ccCCCccCeEEcCCCcccCchh--hcCCCCCCEEECcC
Confidence 34444444444442222 4444444444444444444333 4444455555555555543222 44455555555555
Q ss_pred ccCCCCCCcccccCceeeeecCCC
Q 008707 120 NSFVGEIPPALLTGKVIFKYDNNP 143 (557)
Q Consensus 120 N~~~~~~p~~~~~~~~~~~~~~n~ 143 (557)
|++.+..|-..+..+..+.+.+|+
T Consensus 319 n~l~~~~~~~~l~~L~~L~l~~n~ 342 (466)
T 1o6v_A 319 NNISDISPVSSLTKLQRLFFYNNK 342 (466)
T ss_dssp SCCSCCGGGGGCTTCCEEECCSSC
T ss_pred CcCCCchhhccCccCCEeECCCCc
Confidence 555533332223334444444443
No 380
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=98.72 E-value=2.9e-08 Score=103.86 Aligned_cols=96 Identities=27% Similarity=0.324 Sum_probs=55.5
Q ss_pred CceEEEEecCCCccccCCccccCCCCCcEEECcCCCCCCCCCCccCCCCCcEEEecCccccCcCCCccCCCCcccccccc
Q 008707 39 PRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPDMSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELHIE 118 (557)
Q Consensus 39 ~~l~~L~L~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~l~l~ 118 (557)
++|+.|+|++|.+++ +| +++++++|+.|++++|++++.+..+ .+|+.|++++|++++ +| .++.+++|+.|+++
T Consensus 131 ~~L~~L~L~~n~l~~-lp-~~~~l~~L~~L~l~~N~l~~lp~~~---~~L~~L~L~~n~l~~-l~-~~~~l~~L~~L~l~ 203 (454)
T 1jl5_A 131 PLLEYLGVSNNQLEK-LP-ELQNSSFLKIIDVDNNSLKKLPDLP---PSLEFIAAGNNQLEE-LP-ELQNLPFLTAIYAD 203 (454)
T ss_dssp TTCCEEECCSSCCSS-CC-CCTTCTTCCEEECCSSCCSCCCCCC---TTCCEEECCSSCCSS-CC-CCTTCTTCCEEECC
T ss_pred CCCCEEECcCCCCCC-Cc-ccCCCCCCCEEECCCCcCcccCCCc---ccccEEECcCCcCCc-Cc-cccCCCCCCEEECC
Confidence 456666666666663 55 4666666666666666666533222 366666666666663 55 46666666666666
Q ss_pred cccCCCCCCcccccCceeeeecCCC
Q 008707 119 NNSFVGEIPPALLTGKVIFKYDNNP 143 (557)
Q Consensus 119 ~N~~~~~~p~~~~~~~~~~~~~~n~ 143 (557)
+|++. .+|... ..+..+.+.+|.
T Consensus 204 ~N~l~-~l~~~~-~~L~~L~l~~n~ 226 (454)
T 1jl5_A 204 NNSLK-KLPDLP-LSLESIVAGNNI 226 (454)
T ss_dssp SSCCS-SCCCCC-TTCCEEECCSSC
T ss_pred CCcCC-cCCCCc-CcccEEECcCCc
Confidence 66666 355432 344455555553
No 381
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=98.71 E-value=3e-08 Score=103.87 Aligned_cols=98 Identities=17% Similarity=0.239 Sum_probs=76.9
Q ss_pred CceEEEEecCCCccccCCccccCCCCCcEEECcCCCCCCCCCCccCCCCCcEEEecCccccCcCCCccCCCCcccccccc
Q 008707 39 PRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPDMSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELHIE 118 (557)
Q Consensus 39 ~~l~~L~L~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~l~l~ 118 (557)
++|+.|+|++|.+++ +| .+..+++|+.|+|++|+|++.+ +..+++|+.|+|++|+|++ +| ++.+++|+.|+++
T Consensus 42 ~~L~~L~Ls~n~l~~-~~-~l~~l~~L~~L~Ls~n~l~~~~--~~~l~~L~~L~Ls~N~l~~-~~--~~~l~~L~~L~L~ 114 (457)
T 3bz5_A 42 ATLTSLDCHNSSITD-MT-GIEKLTGLTKLICTSNNITTLD--LSQNTNLTYLACDSNKLTN-LD--VTPLTKLTYLNCD 114 (457)
T ss_dssp TTCCEEECCSSCCCC-CT-TGGGCTTCSEEECCSSCCSCCC--CTTCTTCSEEECCSSCCSC-CC--CTTCTTCCEEECC
T ss_pred CCCCEEEccCCCccc-Ch-hhcccCCCCEEEccCCcCCeEc--cccCCCCCEEECcCCCCce-ee--cCCCCcCCEEECC
Confidence 578888888888884 45 6888888888888888888863 8888888888888888884 44 7888888888888
Q ss_pred cccCCCCCCcccccCceeeeecCCCc
Q 008707 119 NNSFVGEIPPALLTGKVIFKYDNNPK 144 (557)
Q Consensus 119 ~N~~~~~~p~~~~~~~~~~~~~~n~~ 144 (557)
+|+++ .+|-.-...+..+.+++|..
T Consensus 115 ~N~l~-~l~~~~l~~L~~L~l~~N~l 139 (457)
T 3bz5_A 115 TNKLT-KLDVSQNPLLTYLNCARNTL 139 (457)
T ss_dssp SSCCS-CCCCTTCTTCCEEECTTSCC
T ss_pred CCcCC-eecCCCCCcCCEEECCCCcc
Confidence 88888 57644445566677777754
No 382
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=98.67 E-value=3.4e-08 Score=107.10 Aligned_cols=93 Identities=27% Similarity=0.312 Sum_probs=47.3
Q ss_pred CCceEEEEecCCCccccCCccccCCCCCcEEECcCCCCCCCCCCccCCCCCcEEEecCccccCcCCCccCCCCccccccc
Q 008707 38 PPRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPDMSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELHI 117 (557)
Q Consensus 38 p~~l~~L~L~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~l~l 117 (557)
|++|+.|+|++|+|+ .+|. .+++|+.|+|++|+|+++++ .+++|+.|+|++|+|+ .+|. .+++|+.|++
T Consensus 60 ~~~L~~L~L~~N~l~-~lp~---~l~~L~~L~Ls~N~l~~lp~---~l~~L~~L~Ls~N~l~-~l~~---~l~~L~~L~L 128 (622)
T 3g06_A 60 PAHITTLVIPDNNLT-SLPA---LPPELRTLEVSGNQLTSLPV---LPPGLLELSIFSNPLT-HLPA---LPSGLCKLWI 128 (622)
T ss_dssp CTTCSEEEECSCCCS-CCCC---CCTTCCEEEECSCCCSCCCC---CCTTCCEEEECSCCCC-CCCC---CCTTCCEEEC
T ss_pred CCCCcEEEecCCCCC-CCCC---cCCCCCEEEcCCCcCCcCCC---CCCCCCEEECcCCcCC-CCCC---CCCCcCEEEC
Confidence 345555555555555 4443 34555555555555554433 4455555555555555 3443 2345555555
Q ss_pred ccccCCCCCCcccccCceeeeecCCC
Q 008707 118 ENNSFVGEIPPALLTGKVIFKYDNNP 143 (557)
Q Consensus 118 ~~N~~~~~~p~~~~~~~~~~~~~~n~ 143 (557)
++|+++ .+|..+ ..+..+.+++|.
T Consensus 129 ~~N~l~-~lp~~l-~~L~~L~Ls~N~ 152 (622)
T 3g06_A 129 FGNQLT-SLPVLP-PGLQELSVSDNQ 152 (622)
T ss_dssp CSSCCS-CCCCCC-TTCCEEECCSSC
T ss_pred CCCCCC-cCCCCC-CCCCEEECcCCc
Confidence 555555 455432 334444455443
No 383
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=98.66 E-value=4.8e-10 Score=103.59 Aligned_cols=103 Identities=22% Similarity=0.301 Sum_probs=86.6
Q ss_pred CceEEEEecCCCccccCCc------cccCCCCCcEEECcCCCCCCCCCCccCCCCCcEEEecCccccCcCCCccCCCCcc
Q 008707 39 PRITKIALSGKNLKGEIPP------ELKNMEALTELWLDGNFLTGPLPDMSRLIDLRIVHLENNELTGSLPSYMGSLPNL 112 (557)
Q Consensus 39 ~~l~~L~L~~n~l~~~~p~------~~~~l~~L~~L~l~~N~l~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L 112 (557)
..++.++|+.|.++|.+|. .+..+++|+.|+|++|+|++++ .+..+++|+.|+|++|+|+ .+|..+..+++|
T Consensus 18 ~~l~~l~l~~~~l~~~~~~l~~l~~~~~~l~~L~~L~ls~n~l~~l~-~~~~l~~L~~L~l~~n~l~-~l~~~~~~~~~L 95 (198)
T 1ds9_A 18 KSVVATEAEKVELHGMIPPIEKMDATLSTLKACKHLALSTNNIEKIS-SLSGMENLRILSLGRNLIK-KIENLDAVADTL 95 (198)
T ss_dssp TCCCCTTCSEEECCBCCTTCCCCHHHHHHTTTCSEEECSEEEESCCC-CHHHHTTCCEEEEEEEEEC-SCSSHHHHHHHC
T ss_pred ccccCcchheeEeccccCcHhhhhHHHhcCCCCCEEECCCCCCcccc-ccccCCCCCEEECCCCCcc-cccchhhcCCcC
Confidence 3577788888888888887 8999999999999999999954 9999999999999999999 899888888999
Q ss_pred cccccccccCCCCCCcccc--cCceeeeecCCCcc
Q 008707 113 QELHIENNSFVGEIPPALL--TGKVIFKYDNNPKL 145 (557)
Q Consensus 113 ~~l~l~~N~~~~~~p~~~~--~~~~~~~~~~n~~~ 145 (557)
+.|++++|++. .+| .+. ..+..+.+.+|...
T Consensus 96 ~~L~L~~N~l~-~l~-~~~~l~~L~~L~l~~N~i~ 128 (198)
T 1ds9_A 96 EELWISYNQIA-SLS-GIEKLVNLRVLYMSNNKIT 128 (198)
T ss_dssp SEEEEEEEECC-CHH-HHHHHHHSSEEEESEEECC
T ss_pred CEEECcCCcCC-cCC-ccccCCCCCEEECCCCcCC
Confidence 99999999999 576 332 24556677777543
No 384
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=98.64 E-value=1.6e-08 Score=109.62 Aligned_cols=76 Identities=28% Similarity=0.386 Sum_probs=61.4
Q ss_pred CCCcEEECcCCCCCCCCCCccCCCCCcEEEecCccccCcCCCccCCCCcccccccccccCCCCCCccccc--Cceeeeec
Q 008707 63 EALTELWLDGNFLTGPLPDMSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELHIENNSFVGEIPPALLT--GKVIFKYD 140 (557)
Q Consensus 63 ~~L~~L~l~~N~l~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~l~l~~N~~~~~~p~~~~~--~~~~~~~~ 140 (557)
++|+.|+|++|+|++++ ..+++|+.|+|++|+|+ .+|. .+++|+.|++++|+|+ .+|..+.. .+..+.+.
T Consensus 221 ~~L~~L~Ls~N~L~~lp---~~l~~L~~L~Ls~N~L~-~lp~---~~~~L~~L~Ls~N~L~-~lp~~l~~l~~L~~L~L~ 292 (622)
T 3g06_A 221 SGLKELIVSGNRLTSLP---VLPSELKELMVSGNRLT-SLPM---LPSGLLSLSVYRNQLT-RLPESLIHLSSETTVNLE 292 (622)
T ss_dssp TTCCEEECCSSCCSCCC---CCCTTCCEEECCSSCCS-CCCC---CCTTCCEEECCSSCCC-SCCGGGGGSCTTCEEECC
T ss_pred CCCCEEEccCCccCcCC---CCCCcCcEEECCCCCCC-cCCc---ccccCcEEeCCCCCCC-cCCHHHhhccccCEEEec
Confidence 67888899999888855 45688999999999999 7887 5678999999999998 89887643 45677888
Q ss_pred CCCccc
Q 008707 141 NNPKLH 146 (557)
Q Consensus 141 ~n~~~~ 146 (557)
+|+...
T Consensus 293 ~N~l~~ 298 (622)
T 3g06_A 293 GNPLSE 298 (622)
T ss_dssp SCCCCH
T ss_pred CCCCCC
Confidence 888653
No 385
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=98.64 E-value=2.7e-08 Score=104.16 Aligned_cols=82 Identities=24% Similarity=0.353 Sum_probs=56.2
Q ss_pred CCceEEEEecCCCccccCCccccCC-CCCcEEECcCCCCCCCCCCccCCCCCcEEEecCccccCcCCCccCCCCcccccc
Q 008707 38 PPRITKIALSGKNLKGEIPPELKNM-EALTELWLDGNFLTGPLPDMSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELH 116 (557)
Q Consensus 38 p~~l~~L~L~~n~l~~~~p~~~~~l-~~L~~L~l~~N~l~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~l~ 116 (557)
|++|+.|+|++|.+++ ++ .+ ++|+.|+|++|+++++++. +++|+.|++++|+++ .+|. .+++|+.|+
T Consensus 296 ~~~L~~L~l~~N~l~~-i~----~~~~~L~~L~Ls~N~l~~lp~~---~~~L~~L~L~~N~l~-~lp~---~l~~L~~L~ 363 (454)
T 1jl5_A 296 PPNLYYLNASSNEIRS-LC----DLPPSLEELNVSNNKLIELPAL---PPRLERLIASFNHLA-EVPE---LPQNLKQLH 363 (454)
T ss_dssp CTTCCEEECCSSCCSE-EC----CCCTTCCEEECCSSCCSCCCCC---CTTCCEEECCSSCCS-CCCC---CCTTCCEEE
T ss_pred CCcCCEEECcCCcCCc-cc----CCcCcCCEEECCCCcccccccc---CCcCCEEECCCCccc-cccc---hhhhccEEE
Confidence 3455555555555552 22 23 5788888888888874433 477888888888888 6776 367888888
Q ss_pred cccccCCC--CCCcccc
Q 008707 117 IENNSFVG--EIPPALL 131 (557)
Q Consensus 117 l~~N~~~~--~~p~~~~ 131 (557)
+++|++.+ .+|..+.
T Consensus 364 L~~N~l~~l~~ip~~l~ 380 (454)
T 1jl5_A 364 VEYNPLREFPDIPESVE 380 (454)
T ss_dssp CCSSCCSSCCCCCTTCC
T ss_pred CCCCCCCcCCCChHHHH
Confidence 88888886 5666553
No 386
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=98.64 E-value=5.2e-08 Score=97.98 Aligned_cols=99 Identities=28% Similarity=0.451 Sum_probs=57.9
Q ss_pred CceEEEEecCCCccccCCccccCCCCCcEEECcCCCCCCCCCCccCCCCCcEEEecCccccCcCCCccCCCCcccccccc
Q 008707 39 PRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPDMSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELHIE 118 (557)
Q Consensus 39 ~~l~~L~L~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~l~l~ 118 (557)
++++.|++++|.+. .+|. +..+++|+.|+|++|++++.++ +..+++|+.|+|++|.++ .+| .+..+++|+.|+++
T Consensus 44 ~~L~~L~l~~~~i~-~~~~-~~~~~~L~~L~l~~n~i~~~~~-~~~l~~L~~L~L~~n~i~-~~~-~~~~l~~L~~L~l~ 118 (347)
T 4fmz_A 44 ESITKLVVAGEKVA-SIQG-IEYLTNLEYLNLNGNQITDISP-LSNLVKLTNLYIGTNKIT-DIS-ALQNLTNLRELYLN 118 (347)
T ss_dssp TTCSEEECCSSCCC-CCTT-GGGCTTCCEEECCSSCCCCCGG-GTTCTTCCEEECCSSCCC-CCG-GGTTCTTCSEEECT
T ss_pred ccccEEEEeCCccc-cchh-hhhcCCccEEEccCCccccchh-hhcCCcCCEEEccCCccc-Cch-HHcCCCcCCEEECc
Confidence 45666666666666 4443 5666666666666666665544 666666666666666666 344 35666666666666
Q ss_pred cccCCCCCCc-ccccCceeeeecCCC
Q 008707 119 NNSFVGEIPP-ALLTGKVIFKYDNNP 143 (557)
Q Consensus 119 ~N~~~~~~p~-~~~~~~~~~~~~~n~ 143 (557)
+|++. .+|. .-...+..+.+.+|+
T Consensus 119 ~n~i~-~~~~~~~l~~L~~L~l~~n~ 143 (347)
T 4fmz_A 119 EDNIS-DISPLANLTKMYSLNLGANH 143 (347)
T ss_dssp TSCCC-CCGGGTTCTTCCEEECTTCT
T ss_pred CCccc-CchhhccCCceeEEECCCCC
Confidence 66666 4443 112234445555553
No 387
>3r70_A Aminoglycoside phosphotransferase; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE ADP PE3; 1.80A {Escherichia coli} PDB: 3r6z_A* 3uzr_A* 4dca_A* 3hav_A* 3ham_A*
Probab=98.62 E-value=1.6e-07 Score=93.54 Aligned_cols=133 Identities=17% Similarity=0.212 Sum_probs=97.1
Q ss_pred hcccCCCCceEEEEEEEcCCcEEEEEEccCccchhHHHHHHHHHHHhhcCC----CCccceeeEEEecCeeEEEEEecCC
Q 008707 240 CKKIGKGSFGSVYYGKMKDGKEVAVKIMADSCSHRTQQFVTEVALLSRIHH----RNLVPLIGYCEEEHQRILVYEYMHN 315 (557)
Q Consensus 240 ~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~il~~l~h----~nIv~~~~~~~~~~~~~lv~e~~~~ 315 (557)
.+.++.|....||+. |..+++|+.... .....+.+|.++++.+.+ ..+.++++. +..++||||++|
T Consensus 42 v~~l~~G~~n~vy~v----g~~~vlR~~~~~--~~~~~~~~E~~~L~~L~~~~~~~~vP~v~~~----~~~~lvme~i~G 111 (320)
T 3r70_A 42 LRYLSSGDDSDTFLC----NEQYVVKVPKRD--SVRISQKRELELYRFLENCKLSYQIPAVVYQ----SDRFNIMKYIKG 111 (320)
T ss_dssp EEEEEECSSEEEEEE----TTTEEEEEESSH--HHHHHHHHHHHHHHHHTTSCCSSBCCCEEEE----CSSCEEEECCCC
T ss_pred EEeCCCCCCceEEEE----CCEEEEEeCCcH--HHHHHHHHHHHHHHHHHhcCCCCCcceEEec----CCcEEEEeecCC
Confidence 456899999999998 677889976432 223568899999998865 223444544 467899999999
Q ss_pred CChhhhhhccCCCCCcCHHHHHHHHHHHHHHHHHHHcCC-----------------------------------------
Q 008707 316 GTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGC----------------------------------------- 354 (557)
Q Consensus 316 gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~----------------------------------------- 354 (557)
.++.+... ..++......++.++++.++.||+..
T Consensus 112 ~~l~~~~~-----~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (320)
T 3r70_A 112 ERITYEQY-----HKLSEKEKDALAYDEATFLKELHSIEIDCSVSLFSDALVNKKDKFLQDKKLLISILEKEQLLTDEML 186 (320)
T ss_dssp BCCCHHHH-----TTSCHHHHHHHHHHHHHHHHHHHHSCCCTTSHHHHTTBCCHHHHHHHHHHHHHHHHHHTTCCCHHHH
T ss_pred cccccccc-----ccCCHHHHHHHHHHHHHHHHHHhCCCcccCCCccccccccchHHHHHHHHHHHHHHhhcccccccch
Confidence 88864332 22456666777888888888888521
Q ss_pred -------------------CCCeEeeccCCCCEEeCCCCcEEEecccCcccc
Q 008707 355 -------------------NPGIIHRDVKSSNILLDINMRAKVSDFGLSRQA 387 (557)
Q Consensus 355 -------------------~~~ivH~dlk~~NIll~~~~~~kl~Dfgla~~~ 387 (557)
...++|+|++|.||+++.+..+.|.||+.+...
T Consensus 187 ~~~~~~~~~~l~~~~~~~~~~~~~H~D~~~~N~l~~~~~~~~~iD~~~~~~~ 238 (320)
T 3r70_A 187 EHIETIYENILSNAVLFKYTPCLVHNDFSANNMIFRNNRLFGVIDFGDFNVG 238 (320)
T ss_dssp HHHHHHHHHHHTCGGGTCCCCEEECSCCSGGGEEEETTEEEEECCCTTCEEE
T ss_pred HHHHHHHHHHHhccccccCCceeeECCCCCCcEEEECCceEEEECCcccccC
Confidence 123599999999999998666799999987643
No 388
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=98.62 E-value=2.4e-08 Score=100.81 Aligned_cols=104 Identities=19% Similarity=0.247 Sum_probs=84.3
Q ss_pred eeCCCCCceEEEEecCCCccccCCccccCCCCCcEEECcCCCCCCCCC-CccCCCCCcEEEecCccccCcCCC-ccCCCC
Q 008707 33 CSTTTPPRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLP-DMSRLIDLRIVHLENNELTGSLPS-YMGSLP 110 (557)
Q Consensus 33 c~~~~p~~l~~L~L~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~-~~~~l~~L~~L~l~~N~l~~~~p~-~~~~l~ 110 (557)
|.|+. ++++.++|+++ .+|..+ .++|+.|+|++|+|+.+++ .|.++++|+.|+|++|++.+.+|. .|.+++
T Consensus 7 C~C~~----~~v~C~~~~Lt-~iP~~l--~~~l~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~i~~~i~~~~f~~L~ 79 (350)
T 4ay9_X 7 CHCSN----RVFLCQESKVT-EIPSDL--PRNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLP 79 (350)
T ss_dssp SEEET----TEEEEESTTCC-SCCTTC--CTTCSEEEEESCCCSEECTTSSTTCTTCCEEEEECCTTCCEECTTSBCSCT
T ss_pred cEeeC----CEEEecCCCCC-ccCcCc--CCCCCEEEccCCcCCCcCHHHHcCCCCCCEEECcCCCCCCccChhHhhcch
Confidence 66643 46899999999 899877 3789999999999999888 599999999999999999767875 577898
Q ss_pred cccc-cccccccCCCCCCccccc---CceeeeecCCCc
Q 008707 111 NLQE-LHIENNSFVGEIPPALLT---GKVIFKYDNNPK 144 (557)
Q Consensus 111 ~L~~-l~l~~N~~~~~~p~~~~~---~~~~~~~~~n~~ 144 (557)
+|.. +.+.+|++. .+|+..+. .+..+.+++|..
T Consensus 80 ~l~~~l~~~~N~l~-~l~~~~f~~l~~L~~L~l~~n~l 116 (350)
T 4ay9_X 80 KLHEIRIEKANNLL-YINPEAFQNLPNLQYLLISNTGI 116 (350)
T ss_dssp TCCEEEEEEETTCC-EECTTSBCCCTTCCEEEEEEECC
T ss_pred hhhhhhcccCCccc-ccCchhhhhcccccccccccccc
Confidence 8765 667789998 78776654 345667777754
No 389
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=98.55 E-value=4.9e-09 Score=107.39 Aligned_cols=85 Identities=22% Similarity=0.377 Sum_probs=45.2
Q ss_pred CceEEEEecCCCcc-ccCC---ccccCCCCCcEEECcCCCCC--C---CCC-CccCCCCCcEEEecCcccc----CcCCC
Q 008707 39 PRITKIALSGKNLK-GEIP---PELKNMEALTELWLDGNFLT--G---PLP-DMSRLIDLRIVHLENNELT----GSLPS 104 (557)
Q Consensus 39 ~~l~~L~L~~n~l~-~~~p---~~~~~l~~L~~L~l~~N~l~--~---~~~-~~~~l~~L~~L~l~~N~l~----~~~p~ 104 (557)
++|++|+|++|+++ +.+| ..+..+++|+.|+|++|+|+ | ..+ .+..+++|+.|+|++|+|+ +.+|.
T Consensus 159 ~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~g~~~l~~~~l~~~~~L~~L~Ls~n~l~~~g~~~l~~ 238 (386)
T 2ca6_A 159 PPLRSIICGRNRLENGSMKEWAKTFQSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAI 238 (386)
T ss_dssp CCCCEEECCSSCCTGGGHHHHHHHHHHCTTCCEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHH
T ss_pred CCCcEEECCCCCCCcHHHHHHHHHHHhCCCcCEEECcCCCCCHhHHHHHHHHHhhcCCCccEEECcCCCCCcHHHHHHHH
Confidence 35555555555554 2333 23445555555555555555 2 233 4555555666666666553 34555
Q ss_pred ccCCCCcccccccccccCC
Q 008707 105 YMGSLPNLQELHIENNSFV 123 (557)
Q Consensus 105 ~~~~l~~L~~l~l~~N~~~ 123 (557)
.+..+++|+.|++++|+++
T Consensus 239 ~l~~~~~L~~L~L~~n~i~ 257 (386)
T 2ca6_A 239 ALKSWPNLRELGLNDCLLS 257 (386)
T ss_dssp HGGGCTTCCEEECTTCCCC
T ss_pred HHccCCCcCEEECCCCCCc
Confidence 5555555666666665555
No 390
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=98.52 E-value=5.9e-09 Score=106.78 Aligned_cols=108 Identities=16% Similarity=0.202 Sum_probs=90.2
Q ss_pred CceEEEEecCCCcc--c---cCCccccCCCCCcEEECcCCCCC----CCCC-CccCCCCCcEEEecCccccCc----CCC
Q 008707 39 PRITKIALSGKNLK--G---EIPPELKNMEALTELWLDGNFLT----GPLP-DMSRLIDLRIVHLENNELTGS----LPS 104 (557)
Q Consensus 39 ~~l~~L~L~~n~l~--~---~~p~~~~~l~~L~~L~l~~N~l~----~~~~-~~~~l~~L~~L~l~~N~l~~~----~p~ 104 (557)
++|+.|+|++|+|+ | .+|..+..+++|+.|+|++|.|+ +.+| .+..+++|+.|+|++|+|++. +|.
T Consensus 187 ~~L~~L~L~~n~l~~~g~~~l~~~~l~~~~~L~~L~Ls~n~l~~~g~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~ 266 (386)
T 2ca6_A 187 RLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKSWPNLRELGLNDCLLSARGAAAVVD 266 (386)
T ss_dssp TTCCEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHHHGGGCTTCCEEECTTCCCCHHHHHHHHH
T ss_pred CCcCEEECcCCCCCHhHHHHHHHHHhhcCCCccEEECcCCCCCcHHHHHHHHHHccCCCcCEEECCCCCCchhhHHHHHH
Confidence 58999999999998 3 35557889999999999999996 5555 589999999999999999865 567
Q ss_pred cc--CCCCcccccccccccCCC----CCCccc---ccCceeeeecCCCccc
Q 008707 105 YM--GSLPNLQELHIENNSFVG----EIPPAL---LTGKVIFKYDNNPKLH 146 (557)
Q Consensus 105 ~~--~~l~~L~~l~l~~N~~~~----~~p~~~---~~~~~~~~~~~n~~~~ 146 (557)
.+ +.+++|+.|++++|++++ .+|..+ +..+..+.+.+|+...
T Consensus 267 ~l~~~~~~~L~~L~L~~n~i~~~g~~~l~~~l~~~l~~L~~L~l~~N~l~~ 317 (386)
T 2ca6_A 267 AFSKLENIGLQTLRLQYNEIELDAVRTLKTVIDEKMPDLLFLELNGNRFSE 317 (386)
T ss_dssp HHHTCSSCCCCEEECCSSCCBHHHHHHHHHHHHHHCTTCCEEECTTSBSCT
T ss_pred HHhhccCCCeEEEECcCCcCCHHHHHHHHHHHHhcCCCceEEEccCCcCCc
Confidence 66 448999999999999995 388876 4567788899998653
No 391
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=98.52 E-value=1.1e-08 Score=103.84 Aligned_cols=109 Identities=18% Similarity=0.183 Sum_probs=81.0
Q ss_pred CCCceEEEEecCCCccccCC----ccccCCC-CCcEEECcCCCCCCCCC-CccCC-----CCCcEEEecCccccCcCCCc
Q 008707 37 TPPRITKIALSGKNLKGEIP----PELKNME-ALTELWLDGNFLTGPLP-DMSRL-----IDLRIVHLENNELTGSLPSY 105 (557)
Q Consensus 37 ~p~~l~~L~L~~n~l~~~~p----~~~~~l~-~L~~L~l~~N~l~~~~~-~~~~l-----~~L~~L~l~~N~l~~~~p~~ 105 (557)
.|.+|+.|+|++|.+++..+ ..+.+++ +|+.|+|++|+|++..+ .+..+ ++|+.|+|++|++++..+..
T Consensus 20 ~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~n~l~~~~~~~ 99 (362)
T 3goz_A 20 IPHGVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPANVTSLNLSGNFLSYKSSDE 99 (362)
T ss_dssp SCTTCCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHH
T ss_pred CCCCceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCCCccEEECcCCcCChHHHHH
Confidence 45679999999999985555 6678888 89999999999988766 46554 88999999999998666654
Q ss_pred cCC----C-CcccccccccccCCCCCCccc-------ccCceeeeecCCCcc
Q 008707 106 MGS----L-PNLQELHIENNSFVGEIPPAL-------LTGKVIFKYDNNPKL 145 (557)
Q Consensus 106 ~~~----l-~~L~~l~l~~N~~~~~~p~~~-------~~~~~~~~~~~n~~~ 145 (557)
+.. + ++|+.|++++|++++..+..+ ...+..+.+++|...
T Consensus 100 l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~ 151 (362)
T 3goz_A 100 LVKTLAAIPFTITVLDLGWNDFSSKSSSEFKQAFSNLPASITSLNLRGNDLG 151 (362)
T ss_dssp HHHHHHTSCTTCCEEECCSSCGGGSCHHHHHHHHTTSCTTCCEEECTTSCGG
T ss_pred HHHHHHhCCCCccEEECcCCcCCcHHHHHHHHHHHhCCCceeEEEccCCcCC
Confidence 433 3 789999999999884333322 135667778877643
No 392
>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*
Probab=98.52 E-value=7.4e-07 Score=86.20 Aligned_cols=135 Identities=17% Similarity=0.111 Sum_probs=97.6
Q ss_pred ccCCCCce-EEEEEEEc-CCcEEEEEEccCccchhHHHHHHHHHHHhhcC-CCCccceeeEEEecCeeEEEEEecCCCCh
Q 008707 242 KIGKGSFG-SVYYGKMK-DGKEVAVKIMADSCSHRTQQFVTEVALLSRIH-HRNLVPLIGYCEEEHQRILVYEYMHNGTL 318 (557)
Q Consensus 242 ~lG~G~~g-~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~il~~l~-h~nIv~~~~~~~~~~~~~lv~e~~~~gsL 318 (557)
.+..|..| .||+.... ++..+++|+-.. .....+.+|..+|+.+. +--+.++++++.+.+..++|||+++|.++
T Consensus 31 ~~~~G~S~~~v~rl~~~~~~~~~~lk~~~~---~~~~~~~~E~~~l~~l~~~vPVP~v~~~~~~~~~~~lvme~l~G~~~ 107 (272)
T 4gkh_A 31 RDNVGQSGATIYRLYGKPNAPELFLKHGKG---SVANDVTDEMVRLNWLTAFMPLPTIKHFIRTPDDAWLLTTAIPGKTA 107 (272)
T ss_dssp EEECSSSSCEEEEEECCTTCCCEEEEEEET---HHHHHHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCCSEEH
T ss_pred EccCCCcCCeEEEEEecCCCeEEEEEECCC---CCHhHHHHHHHHHHHhccCCCcCeEEEEEEECCeEEEEEEeeCCccc
Confidence 34455555 68988765 466789997653 23456788999999884 33477888999988999999999999887
Q ss_pred hhhhhccCCCCCcCHHHHHHHHHHHHHHHHHHHcC---------------------------------------------
Q 008707 319 RDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTG--------------------------------------------- 353 (557)
Q Consensus 319 ~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~--------------------------------------------- 353 (557)
.+..... ......+..++++.|+-||+.
T Consensus 108 ~~~~~~~-------~~~~~~~~~~l~~~L~~Lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (272)
T 4gkh_A 108 FQVLEEY-------PDSGENIVDALAVFLRRLHSIPVCNCPFNSDRVFRLAQAQSRMNNGLVDASDFDDERNGWPVEQVW 180 (272)
T ss_dssp HHHHHHC-------GGGHHHHHHHHHHHHHHHHTSCGGGCCBBCCHHHHHHHHHHHHHTTCCCGGGCCGGGTTCCHHHHH
T ss_pred cccccCC-------HHHHHHHHHHHHHHHHHhcCCCcccCCcCcccccchhhHHHHHHHhhhhhhhccccccchHHHHHH
Confidence 7654321 122345667777777777741
Q ss_pred ----------CCCCeEeeccCCCCEEeCCCCcEEEecccCccc
Q 008707 354 ----------CNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQ 386 (557)
Q Consensus 354 ----------~~~~ivH~dlk~~NIll~~~~~~kl~Dfgla~~ 386 (557)
....++|||+.+.||++++++.+-|+||+.+..
T Consensus 181 ~~l~~~~~~~~~~~l~HGDl~~~Nil~~~~~~~~viDwe~a~~ 223 (272)
T 4gkh_A 181 KEMHKLLPFSPDSVVTHGDFSLDNLIFDEGKLIGCIDVGRVGI 223 (272)
T ss_dssp HHHHTTCCCCCCEEEECSCCCTTSEEEETTEEEEECCCTTCEE
T ss_pred HHHHhcccccCCcEEEcCCCCCCeEEEECCeEEEEEECccccc
Confidence 112489999999999999877677999997753
No 393
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.50 E-value=4.1e-08 Score=94.29 Aligned_cols=87 Identities=22% Similarity=0.297 Sum_probs=61.1
Q ss_pred CceEE--EEecCCCccccCCc----cccCCCCCcEEECcCCCCCCCC--CC-ccCCCCCcEEEecCccccCcCCCccCCC
Q 008707 39 PRITK--IALSGKNLKGEIPP----ELKNMEALTELWLDGNFLTGPL--PD-MSRLIDLRIVHLENNELTGSLPSYMGSL 109 (557)
Q Consensus 39 ~~l~~--L~L~~n~l~~~~p~----~~~~l~~L~~L~l~~N~l~~~~--~~-~~~l~~L~~L~l~~N~l~~~~p~~~~~l 109 (557)
+.|.. ++++.|... .++. ...++++|+.|+|++|+|+++. |. +..+++|+.|+|++|+|++. ..+..+
T Consensus 141 p~L~~~~l~l~~N~~~-~~~~~l~i~~~~l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~~--~~l~~l 217 (267)
T 3rw6_A 141 PDLVAQNIDVVLNRRS-CMAATLRIIEENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSE--RELDKI 217 (267)
T ss_dssp HHHHHTTCCCCTTSHH-HHHHHHHHHHHHCTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCSG--GGGGGG
T ss_pred cchhhcCccccCCHHH-HHHHHHHHHHhhCCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCCc--hhhhhc
Confidence 34554 777888543 3332 2256788888899999888854 33 67788888999998888843 224444
Q ss_pred C--cccccccccccCCCCCCc
Q 008707 110 P--NLQELHIENNSFVGEIPP 128 (557)
Q Consensus 110 ~--~L~~l~l~~N~~~~~~p~ 128 (557)
. +|+.|+|++|.+++.+|+
T Consensus 218 ~~l~L~~L~L~~Npl~~~~~~ 238 (267)
T 3rw6_A 218 KGLKLEELWLDGNSLCDTFRD 238 (267)
T ss_dssp TTSCCSEEECTTSTTGGGCSS
T ss_pred ccCCcceEEccCCcCccccCc
Confidence 4 888888888888877773
No 394
>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*
Probab=98.45 E-value=1.3e-06 Score=86.29 Aligned_cols=135 Identities=15% Similarity=0.187 Sum_probs=92.9
Q ss_pred cccCCCCceEEEEEEEcCCcEEEEEEccCccchhHHHHHHHHHHHhhcCCC---CccceeeEEE-ecCeeEEEEEecCCC
Q 008707 241 KKIGKGSFGSVYYGKMKDGKEVAVKIMADSCSHRTQQFVTEVALLSRIHHR---NLVPLIGYCE-EEHQRILVYEYMHNG 316 (557)
Q Consensus 241 ~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~il~~l~h~---nIv~~~~~~~-~~~~~~lv~e~~~~g 316 (557)
+.++.|....||+. |..+++|+... ......+.+|.++++.+.+. .+.+++.+.. ..+..++|||+++|.
T Consensus 25 ~~l~~G~~n~v~~v----g~~~VlR~~~~--~~~~~~~~~E~~~L~~L~~~~~v~VP~~~~~~~~~~g~~~~v~e~i~G~ 98 (306)
T 3tdw_A 25 ESLGEGFRNYAILV----NGDWVFRFPKS--QQGADELNKEIQLLPLLVGCVKVNIPQYVYIGKRSDGNPFVGYRKVQGQ 98 (306)
T ss_dssp EEEEECSSEEEEEE----TTTEEEEEESS--HHHHHHHHHHHHHHHHHTTTCSSBCCCEEEEEECTTSCEEEEEECCCSE
T ss_pred eecCCCcceeEEEE----CCEEEEEecCC--chHHHHHHHHHHHHHHHHhcCCCCCCCeEeecccCCCceEEEEeccCCe
Confidence 45788888899988 56788887432 23456788999999999642 3566666664 445678999999998
Q ss_pred ChhhhhhccCCCCCcCHHHHHHHHHHHHHHHHHHHcC-------------------------------------------
Q 008707 317 TLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTG------------------------------------------- 353 (557)
Q Consensus 317 sL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~------------------------------------------- 353 (557)
.+.+... ..++......++.++++.|+.||+.
T Consensus 99 ~l~~~~~-----~~l~~~~~~~~~~~lg~~La~LH~~~~~~~~~~g~p~~~w~~~~~~~~~~~~~~~~~~l~~~~~~~l~ 173 (306)
T 3tdw_A 99 ILGEDGM-----AVLPDDAKDRLALQLAEFMNELSAFPVETAISAGVPVTNLKNKILLLSEAVEDQVFPLLDESLRDYLT 173 (306)
T ss_dssp ECHHHHH-----TTSCHHHHHHHHHHHHHHHHHHHHSCHHHHHHTTCCBCCHHHHHHHHHHHHHHHTGGGSCHHHHHHHH
T ss_pred ECchhhh-----hhCCHHHHHHHHHHHHHHHHHHhcCCcccccccCCChHHHHHHHHHHHHHHHHhcccccchhhHHHHH
Confidence 8765321 1123444445555555555555531
Q ss_pred --------------CCCCeEeeccCCCCEEeCC---CCc-EEEecccCccc
Q 008707 354 --------------CNPGIIHRDVKSSNILLDI---NMR-AKVSDFGLSRQ 386 (557)
Q Consensus 354 --------------~~~~ivH~dlk~~NIll~~---~~~-~kl~Dfgla~~ 386 (557)
....++|+|+++.||+++. ++. +.|+||+.+..
T Consensus 174 ~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~~~iD~~~a~~ 224 (306)
T 3tdw_A 174 LRFQSYMTHPVYTRYTPRLIHGDLSPDHFLTNLNSRQTPLTGIIDFGDAAI 224 (306)
T ss_dssp HHHHHHHHCHHHHCCCCEEECSCCSGGGEEECTTCSSCCEEEECCCTTCEE
T ss_pred HHHHHHHhCcccccCCCeeEeCCCCcccEEEecCCCCCceEEEEehhhcCC
Confidence 1245799999999999987 455 48999997754
No 395
>3d1u_A Putative fructosamine-3-kinase; YP_290396.1, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 1.85A {Thermobifida fusca} PDB: 3f7w_A
Probab=98.43 E-value=9.1e-07 Score=86.45 Aligned_cols=74 Identities=19% Similarity=0.265 Sum_probs=58.9
Q ss_pred cccCCCCceEEEEEEEcCCcEEEEEEccCccchhHHHHHHHHHHHhhcCCC---CccceeeEEEecCeeEEEEEecCCCC
Q 008707 241 KKIGKGSFGSVYYGKMKDGKEVAVKIMADSCSHRTQQFVTEVALLSRIHHR---NLVPLIGYCEEEHQRILVYEYMHNGT 317 (557)
Q Consensus 241 ~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~il~~l~h~---nIv~~~~~~~~~~~~~lv~e~~~~gs 317 (557)
+.|+.|.++.||++...+|+.+++|+...........+..|++.|+.+.+. .+++++++. ..++||||++++.
T Consensus 21 ~~l~gG~~n~vy~v~~~dG~~~vvK~~~~~~~~~~~~~~~E~~~L~~L~~~~~v~vP~v~~~~----~~~lvme~l~g~~ 96 (288)
T 3d1u_A 21 AERGHSHRWHLYRVELADGTPLFVKALPDDAPALDGLFRAEALGLDWLGRSFGSPVPQVAGWD----DRTLAMEWVDERP 96 (288)
T ss_dssp EEEEEETTEEEEEEEETTSCEEEEEECCTTCCCCTTHHHHHHHHHHHHTCSTTCCSCCEEEEE----TTEEEEECCCCCC
T ss_pred eeeCCcchhheEEEEeCCCCeEEEEecCCCCcchhHHHHHHHHHHHHHHhcCCCCcCeEEEec----CcEEEEEecccCC
Confidence 578999999999999888999999986543232345788999999999765 577777653 3689999999887
Q ss_pred h
Q 008707 318 L 318 (557)
Q Consensus 318 L 318 (557)
+
T Consensus 97 ~ 97 (288)
T 3d1u_A 97 P 97 (288)
T ss_dssp C
T ss_pred C
Confidence 4
No 396
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=98.38 E-value=5.6e-08 Score=97.25 Aligned_cols=126 Identities=10% Similarity=0.046 Sum_probs=87.6
Q ss_pred CCCCCCCCCCCCCeEEeeCCC----------CCceEEEEecCCCccccCCccccCCCCCcEEECcCCCCCCC-CC-CccC
Q 008707 17 NDRGDPCVPVPWEWVTCSTTT----------PPRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGP-LP-DMSR 84 (557)
Q Consensus 17 ~~~~~~c~~~~~~~v~c~~~~----------p~~l~~L~L~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~-~~-~~~~ 84 (557)
.|.+--|.+..|+-+..+... .++++.|+|++|.+.+..+. +..+++|+.|+|++|.+++. ++ .+..
T Consensus 38 ~W~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~~l~~L~l~~n~l~~~~~~-~~~~~~L~~L~L~~~~l~~~~~~~~~~~ 116 (336)
T 2ast_B 38 RWYRLASDESLWQTLDLTGKNLHPDVTGRLLSQGVIAFRCPRSFMDQPLAE-HFSPFRVQHMDLSNSVIEVSTLHGILSQ 116 (336)
T ss_dssp HHHHHHTCSTTSSEEECTTCBCCHHHHHHHHHTTCSEEECTTCEECSCCCS-CCCCBCCCEEECTTCEECHHHHHHHHTT
T ss_pred HHHHHhcCchhheeeccccccCCHHHHHhhhhccceEEEcCCccccccchh-hccCCCCCEEEccCCCcCHHHHHHHHhh
Confidence 354322333357766655421 15788888888888855554 56788888888888888764 55 4788
Q ss_pred CCCCcEEEecCccccCcCCCccCCCCcccccccccc-cCCCC-CCccc--ccCceeeeecCCC
Q 008707 85 LIDLRIVHLENNELTGSLPSYMGSLPNLQELHIENN-SFVGE-IPPAL--LTGKVIFKYDNNP 143 (557)
Q Consensus 85 l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~l~l~~N-~~~~~-~p~~~--~~~~~~~~~~~n~ 143 (557)
+++|+.|+|++|++++..|..++.+++|+.|++++| .+++. +|..+ ...+..+.+.+|+
T Consensus 117 ~~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~L~~~~~l~~~~l~~~~~~~~~L~~L~l~~~~ 179 (336)
T 2ast_B 117 CSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSRLDELNLSWCF 179 (336)
T ss_dssp BCCCSEEECTTCBCCHHHHHHHTTCTTCSEEECTTCBSCCHHHHHHHHHHCTTCCEEECCCCT
T ss_pred CCCCCEEeCcCcccCHHHHHHHhcCCCCCEEECCCCCCCCHHHHHHHHhcCCCCCEEcCCCCC
Confidence 888888888888888777888888888888888888 56642 44422 3345666777763
No 397
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=98.34 E-value=9.9e-09 Score=102.80 Aligned_cols=134 Identities=19% Similarity=0.234 Sum_probs=102.1
Q ss_pred HHHHHHHhhhhcCCCCC--CCCCCCCCCCCeEEeeCCCCCceEEEEecCCCccccCCccccCC--CCCcEEECcCCCCCC
Q 008707 2 VLEALRSISDESERTND--RGDPCVPVPWEWVTCSTTTPPRITKIALSGKNLKGEIPPELKNM--EALTELWLDGNFLTG 77 (557)
Q Consensus 2 ~~~~~~~~~~~~~~~~~--~~~~c~~~~~~~v~c~~~~p~~l~~L~L~~n~l~~~~p~~~~~l--~~L~~L~l~~N~l~~ 77 (557)
|-+.|..|-+-++..+. -+--|. .|..+.|. |..++.|+|++|.+. |..+..+ ++|+.|++++|.+++
T Consensus 13 P~eil~~If~~L~~~d~~~~~~vc~--~W~~~~~~---~~~~~~l~l~~~~~~---~~~~~~~~~~~l~~L~l~~n~l~~ 84 (336)
T 2ast_B 13 PDELLLGIFSCLCLPELLKVSGVCK--RWYRLASD---ESLWQTLDLTGKNLH---PDVTGRLLSQGVIAFRCPRSFMDQ 84 (336)
T ss_dssp CHHHHHHHHTTSCHHHHHHTTSSCH--HHHHHHTC---STTSSEEECTTCBCC---HHHHHHHHHTTCSEEECTTCEECS
T ss_pred CHHHHHHHHHhCCHHHHHHHHHHHH--HHHHHhcC---chhheeeccccccCC---HHHHHhhhhccceEEEcCCccccc
Confidence 34455555444433221 122343 58776553 456899999999988 4556777 899999999999999
Q ss_pred CCCCccCCCCCcEEEecCccccCc-CCCccCCCCcccccccccccCCCCCCcccc--cCceeeeecCCC
Q 008707 78 PLPDMSRLIDLRIVHLENNELTGS-LPSYMGSLPNLQELHIENNSFVGEIPPALL--TGKVIFKYDNNP 143 (557)
Q Consensus 78 ~~~~~~~l~~L~~L~l~~N~l~~~-~p~~~~~l~~L~~l~l~~N~~~~~~p~~~~--~~~~~~~~~~n~ 143 (557)
.++.+..+++|+.|+|++|.+++. +|..+..+++|+.|++++|++.+.+|..+. ..+..+.+.+|.
T Consensus 85 ~~~~~~~~~~L~~L~L~~~~l~~~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~L~~~~ 153 (336)
T 2ast_B 85 PLAEHFSPFRVQHMDLSNSVIEVSTLHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLNLSGCS 153 (336)
T ss_dssp CCCSCCCCBCCCEEECTTCEECHHHHHHHHTTBCCCSEEECTTCBCCHHHHHHHTTCTTCSEEECTTCB
T ss_pred cchhhccCCCCCEEEccCCCcCHHHHHHHHhhCCCCCEEeCcCcccCHHHHHHHhcCCCCCEEECCCCC
Confidence 999888999999999999999866 888899999999999999999866666553 356677788874
No 398
>3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A*
Probab=98.28 E-value=2.1e-06 Score=86.70 Aligned_cols=80 Identities=5% Similarity=0.037 Sum_probs=56.2
Q ss_pred ccc-CCCCceEEEEEEEc-------CCcEEEEEEccCcc---chhHHHHHHHHHHHhhcC-C--CCccceeeEEEec---
Q 008707 241 KKI-GKGSFGSVYYGKMK-------DGKEVAVKIMADSC---SHRTQQFVTEVALLSRIH-H--RNLVPLIGYCEEE--- 303 (557)
Q Consensus 241 ~~l-G~G~~g~Vy~~~~~-------~~~~vavK~~~~~~---~~~~~~~~~E~~il~~l~-h--~nIv~~~~~~~~~--- 303 (557)
+.| +.|....+|+.... +++.+++|+..... ......+.+|+.+++.+. + -.+.+++.++.+.
T Consensus 26 ~~l~~~G~~n~~y~v~~~~~~~~~~~~~~~vlR~~~~~~~~~~~~~~~~~~E~~~l~~L~~~~~vpvP~v~~~~~~~~~~ 105 (357)
T 3ats_A 26 SGVDSTGMSSETIILTARWQQDGRSIQQKLVARVAPAAEDVPVFPTYRLDHQFEVIRLVGELTDVPVPRVRWIETTGDVL 105 (357)
T ss_dssp EEECTTSSEEEEEEEEEEEEETTEEEEEEEEEEECCCGGGCCSSSCCCHHHHHHHHHHHHHHCCSCCCCEEEEECSSTTT
T ss_pred EECCCCCccceEEEEEEecccCCCCCCceEEEEeCCCCCccccCchhHHHHHHHHHHHHhhcCCCCCCcEEEEccCCCcc
Confidence 567 88999999998764 26788999765432 001245678999998884 3 3567788877655
Q ss_pred CeeEEEEEecCCCChhh
Q 008707 304 HQRILVYEYMHNGTLRD 320 (557)
Q Consensus 304 ~~~~lv~e~~~~gsL~~ 320 (557)
+..++|||+++|..+.+
T Consensus 106 g~~~~v~e~l~G~~l~~ 122 (357)
T 3ats_A 106 GTPFFLMDYVEGVVPPD 122 (357)
T ss_dssp SSCEEEEECCCCBCCCB
T ss_pred CCceEEEEecCCCChhh
Confidence 35689999999876653
No 399
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=98.26 E-value=1e-07 Score=96.61 Aligned_cols=102 Identities=14% Similarity=0.039 Sum_probs=84.2
Q ss_pred EEEecCCCccccCCccccCCCCCcEEECcCCCCCCCCC-----CccCCC-CCcEEEecCccccCcCCCccCCC-----Cc
Q 008707 43 KIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLP-----DMSRLI-DLRIVHLENNELTGSLPSYMGSL-----PN 111 (557)
Q Consensus 43 ~L~L~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~-----~~~~l~-~L~~L~l~~N~l~~~~p~~~~~l-----~~ 111 (557)
.++|++|+++|.+|..+...++|+.|+|++|.|++..+ .|..++ +|+.|+|++|+|++..+..+..+ ++
T Consensus 2 ~~~ls~n~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~ 81 (362)
T 3goz_A 2 NYKLTLHPGSNPVEEFTSIPHGVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPAN 81 (362)
T ss_dssp EEECCCCTTCCHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTT
T ss_pred ccccccccchHHHHHHHhCCCCceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCCC
Confidence 57899999999998887777789999999999999875 377888 89999999999997777777765 89
Q ss_pred ccccccccccCCCCCCcccc-------cCceeeeecCCCc
Q 008707 112 LQELHIENNSFVGEIPPALL-------TGKVIFKYDNNPK 144 (557)
Q Consensus 112 L~~l~l~~N~~~~~~p~~~~-------~~~~~~~~~~n~~ 144 (557)
|+.|++++|++++..+..+. ..+..+.+++|..
T Consensus 82 L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l 121 (362)
T 3goz_A 82 VTSLNLSGNFLSYKSSDELVKTLAAIPFTITVLDLGWNDF 121 (362)
T ss_dssp CCEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCG
T ss_pred ccEEECcCCcCChHHHHHHHHHHHhCCCCccEEECcCCcC
Confidence 99999999999855554332 3566778888874
No 400
>3ovc_A Hygromycin-B 4-O-kinase; aminoglycoside phosphotransferase, structural genomics, PSI- protein structure initiative; HET: HY0 PE4; 1.95A {Escherichia coli} PDB: 3tyk_A*
Probab=98.25 E-value=3.7e-06 Score=84.96 Aligned_cols=73 Identities=8% Similarity=0.135 Sum_probs=55.3
Q ss_pred cccCCCCceEEEEEEEcCCcEEEEEEccCccchhHHHHHHHHHHHhhcCCCC--ccceeeEEEec-CeeEEEEEecCCCC
Q 008707 241 KKIGKGSFGSVYYGKMKDGKEVAVKIMADSCSHRTQQFVTEVALLSRIHHRN--LVPLIGYCEEE-HQRILVYEYMHNGT 317 (557)
Q Consensus 241 ~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~il~~l~h~n--Iv~~~~~~~~~-~~~~lv~e~~~~gs 317 (557)
+.++.|....+|+... ++..+++|+.... ..+..|..+++.+.... +.+++.++... +..++||||++|..
T Consensus 47 ~~l~gG~~n~~y~v~~-~g~~~vlK~~~~~-----~~~~~E~~~l~~L~~~gvpvP~vl~~~~~~~g~~~lv~e~l~G~~ 120 (362)
T 3ovc_A 47 MQLSEGEESRAFSFDV-GGRGYVLRVNSCA-----DGFYKDRYVYRHFASAALPIPEVLDIGEFSESLTYCISRRAQGVT 120 (362)
T ss_dssp EEEEECSSEEEEEEEE-TTEEEEEEEESCC-----HHHHHHHHHHHHHCCSSSCCCCEEEEEESSSSCEEEEEECCCSEE
T ss_pred EECCCCCcceEEEEEE-CCcEEEEEeCCch-----hhHHHHHHHHHHHHhcCCCCceEEEeccCCCCCeEEEEEecCCCC
Confidence 5688899999999876 4788999986532 25788999999886433 56677776654 56899999998765
Q ss_pred hh
Q 008707 318 LR 319 (557)
Q Consensus 318 L~ 319 (557)
+.
T Consensus 121 l~ 122 (362)
T 3ovc_A 121 LQ 122 (362)
T ss_dssp TT
T ss_pred cc
Confidence 53
No 401
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.24 E-value=1.5e-07 Score=90.24 Aligned_cols=77 Identities=23% Similarity=0.356 Sum_probs=44.8
Q ss_pred CceEEEEecCCCccc--cCCccccCCCCCcEEECcCCCCCCCCC--CccCCCCCcEEEecCccccCcCCC-------ccC
Q 008707 39 PRITKIALSGKNLKG--EIPPELKNMEALTELWLDGNFLTGPLP--DMSRLIDLRIVHLENNELTGSLPS-------YMG 107 (557)
Q Consensus 39 ~~l~~L~L~~n~l~~--~~p~~~~~l~~L~~L~l~~N~l~~~~~--~~~~l~~L~~L~l~~N~l~~~~p~-------~~~ 107 (557)
++|+.|+|++|+|++ .+|..+..+++|+.|+|++|+|++... .+..+ +|+.|+|++|.+++.+|+ .+.
T Consensus 170 ~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~~~~l~~l~~l-~L~~L~L~~Npl~~~~~~~~~y~~~il~ 248 (267)
T 3rw6_A 170 PELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSERELDKIKGL-KLEELWLDGNSLCDTFRDQSTYISAIRE 248 (267)
T ss_dssp TTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCSGGGGGGGTTS-CCSEEECTTSTTGGGCSSHHHHHHHHHH
T ss_pred CCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCCchhhhhcccC-CcceEEccCCcCccccCcchhHHHHHHH
Confidence 456666666666665 344555566666666666666666521 23333 666666666666655552 234
Q ss_pred CCCcccccc
Q 008707 108 SLPNLQELH 116 (557)
Q Consensus 108 ~l~~L~~l~ 116 (557)
.+++|+.||
T Consensus 249 ~~P~L~~LD 257 (267)
T 3rw6_A 249 RFPKLLRLD 257 (267)
T ss_dssp HCTTCCEES
T ss_pred HCcccCeEC
Confidence 555665554
No 402
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=98.21 E-value=1.4e-06 Score=86.85 Aligned_cols=94 Identities=15% Similarity=0.071 Sum_probs=80.2
Q ss_pred CCceEEEEecCCCccccCCccccCCCCCcEEECcCCCCCCCCC-CccCCCCCc-EEEecCccccCcCCCccCCCCccccc
Q 008707 38 PPRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLP-DMSRLIDLR-IVHLENNELTGSLPSYMGSLPNLQEL 115 (557)
Q Consensus 38 p~~l~~L~L~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~-~~~~l~~L~-~L~l~~N~l~~~~p~~~~~l~~L~~l 115 (557)
.++|+.|+|++|+++..-+..|.++++|+.|+|++| ++.+.+ .|.++.+|+ .|++++ +++..-+..|.+|++|+.+
T Consensus 225 ~~~L~~l~L~~n~i~~I~~~aF~~~~~L~~l~l~~n-i~~I~~~aF~~~~~L~~~l~l~~-~l~~I~~~aF~~c~~L~~l 302 (329)
T 3sb4_A 225 MPNLVSLDISKTNATTIPDFTFAQKKYLLKIKLPHN-LKTIGQRVFSNCGRLAGTLELPA-SVTAIEFGAFMGCDNLRYV 302 (329)
T ss_dssp CTTCCEEECTTBCCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEEEECT-TCCEECTTTTTTCTTEEEE
T ss_pred cCCCeEEECCCCCcceecHhhhhCCCCCCEEECCcc-cceehHHHhhCChhccEEEEEcc-cceEEchhhhhCCccCCEE
Confidence 468999999999999444457999999999999999 777777 599999999 999999 7873445678999999999
Q ss_pred ccccccCCCCCCcccccCc
Q 008707 116 HIENNSFVGEIPPALLTGK 134 (557)
Q Consensus 116 ~l~~N~~~~~~p~~~~~~~ 134 (557)
++++|++. .|+...|.+.
T Consensus 303 ~l~~n~i~-~I~~~aF~~~ 320 (329)
T 3sb4_A 303 LATGDKIT-TLGDELFGNG 320 (329)
T ss_dssp EECSSCCC-EECTTTTCTT
T ss_pred EeCCCccC-ccchhhhcCC
Confidence 99999999 8998887644
No 403
>2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis}
Probab=98.08 E-value=1.7e-05 Score=79.15 Aligned_cols=140 Identities=16% Similarity=0.228 Sum_probs=80.3
Q ss_pred cccCCCCceEEEEEEEcCCcEEEEEEccCccchhHHHHHHHHHHHhhcC--CCCccceee------EEEecCeeEEEEEe
Q 008707 241 KKIGKGSFGSVYYGKMKDGKEVAVKIMADSCSHRTQQFVTEVALLSRIH--HRNLVPLIG------YCEEEHQRILVYEY 312 (557)
Q Consensus 241 ~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~il~~l~--h~nIv~~~~------~~~~~~~~~lv~e~ 312 (557)
+.|+.|..+.||+....+| .+++|+.... ...+..|+.+++.|. .-.+.+++. +....+..+++|+|
T Consensus 38 ~~l~gG~~n~~~~v~~~~~-~~vlk~~~~~----~~~~~~e~~~l~~L~~~g~~vp~~~~~~~g~~~~~~~~~~~~l~~~ 112 (346)
T 2q83_A 38 DVIQGNQMALVWKVHTDSG-AVCLKRIHRP----EKKALFSIFAQDYLAKKGMNVPGILPNKKGSLYSKHGSFLFVVYDW 112 (346)
T ss_dssp EECC----CEEEEEEETTE-EEEEEEECSC----HHHHHHHHHHHHHHHHHTCSSCCBCCCTTSCSCEEETTEEEEEEEC
T ss_pred eeccccccCcEEEEEeCCC-CEEEEecCCC----HHHHHHHHHHHHHHHHcCCCCCceeecCCCCEEEEECCEEEEEEEe
Confidence 4466677899999987654 5889988652 233445666666663 112344443 12345678999999
Q ss_pred cCCCChh--------------hhhhccCC----C-------CCcCHHHH-------------------------------
Q 008707 313 MHNGTLR--------------DRLHGSVN----Q-------KPLDWLTR------------------------------- 336 (557)
Q Consensus 313 ~~~gsL~--------------~~l~~~~~----~-------~~l~~~~~------------------------------- 336 (557)
++|..+. ..++.... . ....|...
T Consensus 113 i~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 192 (346)
T 2q83_A 113 IEGRPFELTVKQDLEFIMKGLADFHTASVGYQPPNGVPIFTKLGRWPNHYTKRCKQMETWKLMAEAEKEDPFSQLYLQEI 192 (346)
T ss_dssp CCCBCCCTTSHHHHHHHHHHHHHHHHHHTTCCCCTTCCCCBCTTCHHHHHHHHHHHHHHHHHHHHHCSSCHHHHHHHHHH
T ss_pred ecCccCCCCCHHHHHHHHHHHHHHHHhCCCCCCCccchhcccccchHHHHHHHHHHHHHHHHHHHhccCCcHHHHHHHHH
Confidence 9986542 11111100 0 00122110
Q ss_pred HHHHHHHHHHHHHHHc----------CCCCCeEeeccCCCCEEeCCCCcEEEecccCcc
Q 008707 337 LQIAHDAAKGLEYLHT----------GCNPGIIHRDVKSSNILLDINMRAKVSDFGLSR 385 (557)
Q Consensus 337 ~~i~~qia~aL~~LH~----------~~~~~ivH~dlk~~NIll~~~~~~kl~Dfgla~ 385 (557)
..+..++..++++|++ .....++|||+++.||+++.++.+.|+||+.+.
T Consensus 193 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~lIDfe~a~ 251 (346)
T 2q83_A 193 DGFIEDGLRIKDRLLQSTYVPWTEQLKKSPNLCHQDYGTGNTLLGENEQIWVIDLDTVS 251 (346)
T ss_dssp HHHHHHHHHHHHHHHHTTHHHHHHHHHHSCCEECSSCSTTSEEECGGGCEEECCCTTCE
T ss_pred HHHHHHHHHHHHHHHhchHHHHHHhccccCceecCCCCcccEEEeCCCcEEEEehhhcc
Confidence 1111223445666652 013789999999999999888889999999764
No 404
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=98.04 E-value=2.3e-07 Score=97.03 Aligned_cols=107 Identities=17% Similarity=0.153 Sum_probs=79.8
Q ss_pred CceEEEEecCCCccccCCccccC-----CCCCcEEECcCCCCCCC----CC-CccCCCCCcEEEecCccccCcCCCccCC
Q 008707 39 PRITKIALSGKNLKGEIPPELKN-----MEALTELWLDGNFLTGP----LP-DMSRLIDLRIVHLENNELTGSLPSYMGS 108 (557)
Q Consensus 39 ~~l~~L~L~~n~l~~~~p~~~~~-----l~~L~~L~l~~N~l~~~----~~-~~~~l~~L~~L~l~~N~l~~~~p~~~~~ 108 (557)
++|+.|+|++|.+++..+..+.. .++|+.|+|++|.+++. ++ .+..+++|+.|+|++|++++..+..+..
T Consensus 284 ~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~ 363 (461)
T 1z7x_W 284 ESLKELSLAGNELGDEGARLLCETLLEPGCQLESLWVKSCSFTAACCSHFSSVLAQNRFLLELQISNNRLEDAGVRELCQ 363 (461)
T ss_dssp TTCCEEECTTCCCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHHHHHHHHCSSCCEEECCSSBCHHHHHHHHHH
T ss_pred CCcceEECCCCCCchHHHHHHHHHhccCCccceeeEcCCCCCchHHHHHHHHHHhhCCCccEEEccCCccccccHHHHHH
Confidence 67999999999997554444332 36999999999999875 33 4677899999999999988554443432
Q ss_pred -----CCcccccccccccCCC----CCCccc--ccCceeeeecCCCcc
Q 008707 109 -----LPNLQELHIENNSFVG----EIPPAL--LTGKVIFKYDNNPKL 145 (557)
Q Consensus 109 -----l~~L~~l~l~~N~~~~----~~p~~~--~~~~~~~~~~~n~~~ 145 (557)
+++|+.|++++|++++ .+|..+ ...+..+.+++|+..
T Consensus 364 ~l~~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~l~~N~i~ 411 (461)
T 1z7x_W 364 GLGQPGSVLRVLWLADCDVSDSSCSSLAATLLANHSLRELDLSNNCLG 411 (461)
T ss_dssp HHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCCCCCEEECCSSSCC
T ss_pred HHcCCCCceEEEECCCCCCChhhHHHHHHHHHhCCCccEEECCCCCCC
Confidence 6789999999999885 566654 345667788888744
No 405
>2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A*
Probab=98.02 E-value=1.8e-05 Score=80.94 Aligned_cols=74 Identities=14% Similarity=0.138 Sum_probs=49.0
Q ss_pred cccCCCCceEEEEEEEc-CCcEEEEEEccCccc-------hhHHHHHHHHHHHhhcCC--CC-ccceeeEEEecCeeEEE
Q 008707 241 KKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCS-------HRTQQFVTEVALLSRIHH--RN-LVPLIGYCEEEHQRILV 309 (557)
Q Consensus 241 ~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-------~~~~~~~~E~~il~~l~h--~n-Iv~~~~~~~~~~~~~lv 309 (557)
+.+|.|..+.||++... +++.+++|....... ...+.+..|.++++.+.. +. +.+++.+ +.+..++|
T Consensus 36 ~~lg~G~~n~vyrv~~~~~~~~~vvK~~~~~~r~~~~~~~~~~~r~~~E~~~L~~l~~~~~~~vP~~~~~--d~~~~~lv 113 (397)
T 2olc_A 36 QEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYS--DTEMAVTV 113 (397)
T ss_dssp EECCSSSSEEEEEEEC----CEEEEEEECCC-------CCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEE--ETTTTEEE
T ss_pred EECCCCceEEEEEEEECCCCcEEEEEecchhhcccCCCCcCcHHHHHHHHHHHHHhhhhCCCCcCeEEEE--cCCccEEE
Confidence 57999999999999754 468899997653221 123456779999988842 33 3455543 34456899
Q ss_pred EEecCCC
Q 008707 310 YEYMHNG 316 (557)
Q Consensus 310 ~e~~~~g 316 (557)
||++++.
T Consensus 114 mE~l~g~ 120 (397)
T 2olc_A 114 MEDLSHL 120 (397)
T ss_dssp ECCCTTS
T ss_pred EEeCCCc
Confidence 9999763
No 406
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=98.02 E-value=1.1e-07 Score=99.41 Aligned_cols=85 Identities=22% Similarity=0.246 Sum_probs=43.9
Q ss_pred CceEEEEecCCCccccC-----CccccCCCCCcEEECcCCCCCCC----CC-CccCCCCCcEEEecCccccCcCCCccC-
Q 008707 39 PRITKIALSGKNLKGEI-----PPELKNMEALTELWLDGNFLTGP----LP-DMSRLIDLRIVHLENNELTGSLPSYMG- 107 (557)
Q Consensus 39 ~~l~~L~L~~n~l~~~~-----p~~~~~l~~L~~L~l~~N~l~~~----~~-~~~~l~~L~~L~l~~N~l~~~~p~~~~- 107 (557)
++|+.|+|++|.+++.- +..+..+++|+.|+|++|+|+.. ++ .+..+++|+.|+|++|.+++..+..+.
T Consensus 227 ~~L~~L~Ls~n~l~~~~~~~l~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~ 306 (461)
T 1z7x_W 227 ASLRELALGSNKLGDVGMAELCPGLLHPSSRLRTLWIWECGITAKGCGDLCRVLRAKESLKELSLAGNELGDEGARLLCE 306 (461)
T ss_dssp TTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCTTCCEEECTTCCCHHHHHHHHHH
T ss_pred CCccEEeccCCcCChHHHHHHHHHHhcCCCCceEEECcCCCCCHHHHHHHHHHHhhCCCcceEECCCCCCchHHHHHHHH
Confidence 45666666666665321 11122456666666666666652 22 355566666666666665532222221
Q ss_pred ----CCCcccccccccccCC
Q 008707 108 ----SLPNLQELHIENNSFV 123 (557)
Q Consensus 108 ----~l~~L~~l~l~~N~~~ 123 (557)
..++|+.|++++|.++
T Consensus 307 ~l~~~~~~L~~L~L~~n~l~ 326 (461)
T 1z7x_W 307 TLLEPGCQLESLWVKSCSFT 326 (461)
T ss_dssp HHTSTTCCCCEEECTTSCCB
T ss_pred HhccCCccceeeEcCCCCCc
Confidence 1245556666666555
No 407
>3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT}
Probab=97.86 E-value=0.00012 Score=72.13 Aligned_cols=137 Identities=18% Similarity=0.215 Sum_probs=90.9
Q ss_pred cccCCCCceEEEEEEEcCCcEEEEEEccCccchhHHHHHHHHHHHhhcC---CCCccceeeEEEecCeeEEEEEecCCCC
Q 008707 241 KKIGKGSFGSVYYGKMKDGKEVAVKIMADSCSHRTQQFVTEVALLSRIH---HRNLVPLIGYCEEEHQRILVYEYMHNGT 317 (557)
Q Consensus 241 ~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~il~~l~---h~nIv~~~~~~~~~~~~~lv~e~~~~gs 317 (557)
+.|+.|....+|+.... +..+++|+.... ....+..|.+.|+.|. ...+++++.+....+..++||||+++..
T Consensus 42 ~~l~gG~~n~~y~v~~~-~~~~vlK~~~~~---~~~~~~~E~~~L~~L~~~~~v~VP~vl~~~~~~g~~~lvme~l~G~~ 117 (312)
T 3jr1_A 42 EKLYSGEMNEIWLINDE-VQTVFVKINERS---YRSMFRAEADQLALLAKTNSINVPLVYGIGNSQGHSFLLLEALNKSK 117 (312)
T ss_dssp EEECCSSSSEEEEEESS-SCEEEEEEEEGG---GHHHHHHHHHHHHHHHHTTSSBCCCEEEEEECSSEEEEEEECCCCCC
T ss_pred EEeCCccceeeeEEEEC-CCeEEEEeCCcc---cHHHHHHHHHHHHHHHhhCCCCcceEEEEeecCCceEEEEEeccCCC
Confidence 46899999999999864 678889986532 3567889999999884 3568888888888888999999999876
Q ss_pred hhh-----------hhhccCC-------------------CCCcCHHHHH---HHH----------------HHHHHHH-
Q 008707 318 LRD-----------RLHGSVN-------------------QKPLDWLTRL---QIA----------------HDAAKGL- 347 (557)
Q Consensus 318 L~~-----------~l~~~~~-------------------~~~l~~~~~~---~i~----------------~qia~aL- 347 (557)
+.. .++.... .-.-+|.... ++. .++++.+
T Consensus 118 ~~~~~~~~lG~~LA~LH~~~~~~~fG~~~~~~~G~~~q~n~w~~~W~~f~~~~Rl~~~l~~a~~~g~~~~~~~~l~~~l~ 197 (312)
T 3jr1_A 118 NKQSSFTIFAEKIAQLHQIQGPDKYGLDFDTWLGPIYQPNDWQTSWAKFFSENRIGWQLQICKEKGLIFGNIDLIVQIVA 197 (312)
T ss_dssp CCTTHHHHHHHHHHHHHHCCCCSSBBCSSCEEETTEEECCCCBSCHHHHHHHHTHHHHHHHHHHHTCCCSCHHHHHHHHH
T ss_pred CCchhHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCcCCCCCCcCCHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHH
Confidence 421 1222111 0011343321 111 1122222
Q ss_pred HHHHc-CCCCCeEeeccCCCCEEeCCCCcEEEeccc
Q 008707 348 EYLHT-GCNPGIIHRDVKSSNILLDINMRAKVSDFG 382 (557)
Q Consensus 348 ~~LH~-~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg 382 (557)
..|.. .....++|+|+.+.|++++.++ +.|.|+.
T Consensus 198 ~~L~~~~~~~~l~HgD~~~~N~l~~~~~-~~~iD~~ 232 (312)
T 3jr1_A 198 DTLSKHNPKPSILHGNLWIENCIQVDDK-IFVCNPA 232 (312)
T ss_dssp HHHTTCCCCCEEECSSCSGGGEEEETTE-EEECSCC
T ss_pred HHhccCCCCceeEeCCCCcCcEeecCCC-eEEEcCc
Confidence 23321 1246899999999999999887 8899974
No 408
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=97.85 E-value=1.1e-06 Score=89.37 Aligned_cols=107 Identities=21% Similarity=0.176 Sum_probs=77.2
Q ss_pred CceEEEEecCCCccccCCccc-----cCCCCCcEEECcCCCCCCC----CC-CccCCCCCcEEEecCccccC----cCCC
Q 008707 39 PRITKIALSGKNLKGEIPPEL-----KNMEALTELWLDGNFLTGP----LP-DMSRLIDLRIVHLENNELTG----SLPS 104 (557)
Q Consensus 39 ~~l~~L~L~~n~l~~~~p~~~-----~~l~~L~~L~l~~N~l~~~----~~-~~~~l~~L~~L~l~~N~l~~----~~p~ 104 (557)
++|+.|+|++|.|+..-...+ ...++|+.|+|++|.|+.. ++ .+..+++|+.|+|++|+|+. .++.
T Consensus 126 ~~L~~L~Ls~n~l~~~~~~~L~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~L~~L~Ls~N~l~~~g~~~L~~ 205 (372)
T 3un9_A 126 LRARKLGLQLNSLGPEACKDLRDLLLHDQCQITTLRLSNNPLTAAGVAVLMEGLAGNTSVTHLSLLHTGLGDEGLELLAA 205 (372)
T ss_dssp HTEEEEECCSSCCCHHHHHHHHHHHHSTTCCCCEEECCSSCCHHHHHHHHHHHHHTCSSCCEEECTTSSCHHHHHHHHHH
T ss_pred HhccHhhcCCCCCCHHHHHHHHHHHHhcCCccceeeCCCCCCChHHHHHHHHHHhcCCCcCEEeCCCCCCCcHHHHHHHH
Confidence 468999999999975433333 3468899999999998753 22 35778899999999999873 2355
Q ss_pred ccCCCCcccccccccccCCCC----CCccc--ccCceeeeecCCCcc
Q 008707 105 YMGSLPNLQELHIENNSFVGE----IPPAL--LTGKVIFKYDNNPKL 145 (557)
Q Consensus 105 ~~~~l~~L~~l~l~~N~~~~~----~p~~~--~~~~~~~~~~~n~~~ 145 (557)
.+..+++|+.|++++|+|+.. ++..+ ...+..+.+++|+..
T Consensus 206 ~L~~~~~L~~L~Ls~N~i~~~g~~~l~~~L~~~~~L~~L~Ls~N~i~ 252 (372)
T 3un9_A 206 QLDRNRQLQELNVAYNGAGDTAALALARAAREHPSLELLHLYFNELS 252 (372)
T ss_dssp HGGGCSCCCEEECCSSCCCHHHHHHHHHHHHHCSSCCEEECTTSSCC
T ss_pred HHhcCCCcCeEECCCCCCCHHHHHHHHHHHHhCCCCCEEeccCCCCC
Confidence 667778999999999998732 11111 235677788888743
No 409
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=97.82 E-value=1.3e-06 Score=88.63 Aligned_cols=107 Identities=17% Similarity=0.112 Sum_probs=75.9
Q ss_pred CCceEEEEecCCCccccCCccc-cCCCCCcEEECcCCCCCCCCC-Cc-----cCCCCCcEEEecCccccC----cCCCcc
Q 008707 38 PPRITKIALSGKNLKGEIPPEL-KNMEALTELWLDGNFLTGPLP-DM-----SRLIDLRIVHLENNELTG----SLPSYM 106 (557)
Q Consensus 38 p~~l~~L~L~~n~l~~~~p~~~-~~l~~L~~L~l~~N~l~~~~~-~~-----~~l~~L~~L~l~~N~l~~----~~p~~~ 106 (557)
+.+|+.|+|++|.|+..-...+ ..+++|+.|+|++|.|+.... .+ ...++|+.|+|++|.|+. .++..+
T Consensus 100 ~~~L~~L~Ls~n~l~~~~~~~l~~~L~~L~~L~Ls~n~l~~~~~~~L~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L 179 (372)
T 3un9_A 100 RHALDEVNLASCQLDPAGLRTLLPVFLRARKLGLQLNSLGPEACKDLRDLLLHDQCQITTLRLSNNPLTAAGVAVLMEGL 179 (372)
T ss_dssp SSCEEEEECTTCCCCHHHHHHTHHHHHTEEEEECCSSCCCHHHHHHHHHHHHSTTCCCCEEECCSSCCHHHHHHHHHHHH
T ss_pred CCCceEEEecCCCCCHHHHHHHHHHHHhccHhhcCCCCCCHHHHHHHHHHHHhcCCccceeeCCCCCCChHHHHHHHHHH
Confidence 4689999999999975433333 345789999999999976533 23 346789999999999873 245556
Q ss_pred CCCCcccccccccccCCCC----CCccc--ccCceeeeecCCCc
Q 008707 107 GSLPNLQELHIENNSFVGE----IPPAL--LTGKVIFKYDNNPK 144 (557)
Q Consensus 107 ~~l~~L~~l~l~~N~~~~~----~p~~~--~~~~~~~~~~~n~~ 144 (557)
..+++|+.|+|++|+|... ++..+ ...+..+.+++|..
T Consensus 180 ~~~~~L~~L~Ls~N~l~~~g~~~L~~~L~~~~~L~~L~Ls~N~i 223 (372)
T 3un9_A 180 AGNTSVTHLSLLHTGLGDEGLELLAAQLDRNRQLQELNVAYNGA 223 (372)
T ss_dssp HTCSSCCEEECTTSSCHHHHHHHHHHHGGGCSCCCEEECCSSCC
T ss_pred hcCCCcCEEeCCCCCCCcHHHHHHHHHHhcCCCcCeEECCCCCC
Confidence 6788999999999998731 12222 12566777888764
No 410
>3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX}
Probab=97.76 E-value=0.00011 Score=71.51 Aligned_cols=73 Identities=19% Similarity=0.288 Sum_probs=54.0
Q ss_pred cccCCCCceEEEEEEEcCCcEEEEEEccCccchhHHHHHHHHHHHhhcC-CC--CccceeeEEEecCeeEEEEEecCCCC
Q 008707 241 KKIGKGSFGSVYYGKMKDGKEVAVKIMADSCSHRTQQFVTEVALLSRIH-HR--NLVPLIGYCEEEHQRILVYEYMHNGT 317 (557)
Q Consensus 241 ~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~il~~l~-h~--nIv~~~~~~~~~~~~~lv~e~~~~gs 317 (557)
+.+|.|..+.||+.+..+|+.|++|+...........|..|++.|+.|. .. -+.+++++ + ..++||||++++.
T Consensus 21 ~~~g~G~~~~vyrv~l~DG~~~~vK~~~~~~~~~~~~~~~Ea~~L~~L~~~~~vpvP~v~~~--~--~~~lv~e~l~~~~ 96 (288)
T 3f7w_A 21 AERGHSHRWHLYRVELADGTPLFVKALPDDAPALDGLFRAEALGLDWLGRSFGSPVPQVAGW--D--DRTLAMEWVDERP 96 (288)
T ss_dssp EEEEEETTEEEEEEEETTSCEEEEEECCTTCCCCTTHHHHHHHHHHHHTCSTTCCSCCEEEE--E--TTEEEEECCCCCC
T ss_pred EecCCCCCeEEEEEEECCCCEEEEEEeCCCCcchhhHHHHHHHHHHHHHhhCCCCcceEEec--c--CceEEEEeecccC
Confidence 5689999999999999999999999865543333456788999999884 21 24444443 2 3478999998765
No 411
>2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana}
Probab=97.62 E-value=0.00031 Score=72.36 Aligned_cols=79 Identities=11% Similarity=0.108 Sum_probs=46.9
Q ss_pred CCeEeeccCCCCEEeCCCCcEEEecccCccccCCCCccccccccCCCCccCCcccCCC---CCCcccceehhHHHHHHHH
Q 008707 356 PGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEEDLTHISSVARGTVGYLDPEYYGNQ---QLTEKSDVYSFGVVLLELI 432 (557)
Q Consensus 356 ~~ivH~dlk~~NIll~~~~~~kl~Dfgla~~~~~~~~~~~~~~~g~~~y~aPE~l~~~---~~s~~~DvwslG~ll~ell 432 (557)
..++|||+++.||+++.++ +.++||+.+...........-...-...|.+|+..... ......++.+....+|+.+
T Consensus 232 ~~liHGDl~~~Nil~~~~~-~~lID~e~a~~G~p~~Dla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y 310 (420)
T 2pyw_A 232 QALIHGDLHTGSVMVTQDS-TQVIDPEFSFYGPMGFDIGAYLGNLILAFFAQDGHATQENDRKEYKQWILRTIEQTWNLF 310 (420)
T ss_dssp CEEECSCCSGGGEEECSSC-EEECCCTTCEEECHHHHHHHHHHHHHHHHHHGGGGCCSSCCSHHHHHHHHHHHHHHHHHH
T ss_pred CeEEecCCCCCcEEEeCCC-CEEEeCcccccCchHHHHHHHHHHHHHHHHhcccccccccchHHHHHHHHHHHHHHHHHH
Confidence 7899999999999998776 99999998875432211110000001234555544311 1122345557777777777
Q ss_pred hCC
Q 008707 433 SGK 435 (557)
Q Consensus 433 tg~ 435 (557)
++.
T Consensus 311 ~~~ 313 (420)
T 2pyw_A 311 NKR 313 (420)
T ss_dssp HHH
T ss_pred HHH
Confidence 653
No 412
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=97.57 E-value=7.9e-06 Score=74.13 Aligned_cols=86 Identities=22% Similarity=0.291 Sum_probs=68.7
Q ss_pred CCceEEEEecCC-Ccccc----CCccccCCCCCcEEECcCCCCCCC----CC-CccCCCCCcEEEecCccccCc----CC
Q 008707 38 PPRITKIALSGK-NLKGE----IPPELKNMEALTELWLDGNFLTGP----LP-DMSRLIDLRIVHLENNELTGS----LP 103 (557)
Q Consensus 38 p~~l~~L~L~~n-~l~~~----~p~~~~~l~~L~~L~l~~N~l~~~----~~-~~~~l~~L~~L~l~~N~l~~~----~p 103 (557)
.+.|++|+|++| .|... +...+...++|++|+|++|.|... +. .+...++|+.|+|++|.|... +.
T Consensus 35 ~~~L~~L~L~~n~~i~~~g~~~l~~~L~~~~~L~~L~Ls~n~i~~~g~~~l~~~L~~n~~L~~L~L~~N~i~~~g~~~l~ 114 (185)
T 1io0_A 35 DPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISGSGILALV 114 (185)
T ss_dssp CTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCHHHHHHHH
T ss_pred CCCCCEEEecCCCCCCHHHHHHHHHHHHhCCCcCEEECcCCCCChHHHHHHHHHHHhCCCcCEEECcCCcCCHHHHHHHH
Confidence 368999999999 88632 455677789999999999999753 12 355668899999999999842 45
Q ss_pred CccCCCCccccccc--ccccCC
Q 008707 104 SYMGSLPNLQELHI--ENNSFV 123 (557)
Q Consensus 104 ~~~~~l~~L~~l~l--~~N~~~ 123 (557)
..+...++|+.|++ ++|.|.
T Consensus 115 ~~L~~n~~L~~L~L~~~~N~i~ 136 (185)
T 1io0_A 115 EALQSNTSLIELRIDNQSQPLG 136 (185)
T ss_dssp HGGGGCSSCCEEECCCCSSCCC
T ss_pred HHHHhCCCceEEEecCCCCCCC
Confidence 66777889999999 889987
No 413
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=97.54 E-value=0.00015 Score=71.97 Aligned_cols=45 Identities=13% Similarity=0.308 Sum_probs=27.1
Q ss_pred CCCCcEEEecCccccCcCCC-ccCCCCcccccccccccCCCCCCccccc
Q 008707 85 LIDLRIVHLENNELTGSLPS-YMGSLPNLQELHIENNSFVGEIPPALLT 132 (557)
Q Consensus 85 l~~L~~L~l~~N~l~~~~p~-~~~~l~~L~~l~l~~N~~~~~~p~~~~~ 132 (557)
+++|+.|+|++|+++ .+|. .|.+|++|+.+++.+| +. .|++..|.
T Consensus 225 ~~~L~~l~L~~n~i~-~I~~~aF~~~~~L~~l~l~~n-i~-~I~~~aF~ 270 (329)
T 3sb4_A 225 MPNLVSLDISKTNAT-TIPDFTFAQKKYLLKIKLPHN-LK-TIGQRVFS 270 (329)
T ss_dssp CTTCCEEECTTBCCC-EECTTTTTTCTTCCEEECCTT-CC-EECTTTTT
T ss_pred cCCCeEEECCCCCcc-eecHhhhhCCCCCCEEECCcc-cc-eehHHHhh
Confidence 456666666666666 4443 4556666666666666 55 56665554
No 414
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=97.49 E-value=0.00011 Score=62.23 Aligned_cols=56 Identities=32% Similarity=0.415 Sum_probs=46.5
Q ss_pred EEEEecCCCcc-ccCCccccCCCCCcEEECcCCCCCCCCCC-ccCCCCCcEEEecCcccc
Q 008707 42 TKIALSGKNLK-GEIPPELKNMEALTELWLDGNFLTGPLPD-MSRLIDLRIVHLENNELT 99 (557)
Q Consensus 42 ~~L~L~~n~l~-~~~p~~~~~l~~L~~L~l~~N~l~~~~~~-~~~l~~L~~L~l~~N~l~ 99 (557)
..++.++++|+ ..+|..+. ++|+.|+|++|+|+.++++ |..+++|+.|+|++|.+.
T Consensus 11 ~~v~Cs~~~L~~~~vP~~lp--~~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~~ 68 (130)
T 3rfe_A 11 TLVDCGRRGLTWASLPTAFP--VDTTELVLTGNNLTALPPGLLDALPALRTAHLGANPWR 68 (130)
T ss_dssp TEEECCSSCCCTTTSCSCCC--TTCSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCCB
T ss_pred CEEEeCCCCCccccCCCCCC--cCCCEEECCCCcCCccChhhhhhccccCEEEecCCCee
Confidence 48999999997 56775543 5799999999999998884 888999999999999764
No 415
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=97.44 E-value=8.4e-06 Score=73.98 Aligned_cols=85 Identities=15% Similarity=0.251 Sum_probs=67.9
Q ss_pred CceEEEEecCCCcccc----CCccccCCCCCcEEECcCCCCCCC----C-CCccCCCCCcEEEe--cCccccCc----CC
Q 008707 39 PRITKIALSGKNLKGE----IPPELKNMEALTELWLDGNFLTGP----L-PDMSRLIDLRIVHL--ENNELTGS----LP 103 (557)
Q Consensus 39 ~~l~~L~L~~n~l~~~----~p~~~~~l~~L~~L~l~~N~l~~~----~-~~~~~l~~L~~L~l--~~N~l~~~----~p 103 (557)
++|++|+|++|.|... +...+...++|+.|+|++|.|+.. + ..+...++|+.|+| ++|.|+.. +.
T Consensus 65 ~~L~~L~Ls~n~i~~~g~~~l~~~L~~n~~L~~L~L~~N~i~~~g~~~l~~~L~~n~~L~~L~L~~~~N~i~~~g~~~l~ 144 (185)
T 1io0_A 65 TYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISGSGILALVEALQSNTSLIELRIDNQSQPLGNNVEMEIA 144 (185)
T ss_dssp CSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCHHHHHHHHHGGGGCSSCCEEECCCCSSCCCHHHHHHHH
T ss_pred CCcCEEECcCCCCChHHHHHHHHHHHhCCCcCEEECcCCcCCHHHHHHHHHHHHhCCCceEEEecCCCCCCCHHHHHHHH
Confidence 6799999999999742 445566678999999999999863 2 24777889999999 88999743 34
Q ss_pred CccCCCCcccccccccccCC
Q 008707 104 SYMGSLPNLQELHIENNSFV 123 (557)
Q Consensus 104 ~~~~~l~~L~~l~l~~N~~~ 123 (557)
..+...++|+.|++++|.+.
T Consensus 145 ~~L~~n~~L~~L~L~~n~i~ 164 (185)
T 1io0_A 145 NMLEKNTTLLKFGYHFTQQG 164 (185)
T ss_dssp HHHHHCSSCCEEECCCSSHH
T ss_pred HHHHhCCCcCEEeccCCCCC
Confidence 45556689999999999886
No 416
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=97.41 E-value=1.4e-05 Score=86.36 Aligned_cols=106 Identities=15% Similarity=0.075 Sum_probs=70.2
Q ss_pred CCceEEEEec----CCCcccc-----CCccccCCCCCcEEECcCC--CCCCCCC-Cc-cCCCCCcEEEecCccccC-cCC
Q 008707 38 PPRITKIALS----GKNLKGE-----IPPELKNMEALTELWLDGN--FLTGPLP-DM-SRLIDLRIVHLENNELTG-SLP 103 (557)
Q Consensus 38 p~~l~~L~L~----~n~l~~~-----~p~~~~~l~~L~~L~l~~N--~l~~~~~-~~-~~l~~L~~L~l~~N~l~~-~~p 103 (557)
.++|+.|+|+ .|.+++. ++..+.++++|+.|+|++| .+++... .+ ..+++|+.|+|++|++++ .++
T Consensus 402 ~~~L~~L~l~~~~~~n~l~~~p~~~~~~~~~~~~~~L~~L~L~~~~~~l~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~ 481 (592)
T 3ogk_B 402 LKNLCDFRLVLLDREERITDLPLDNGVRSLLIGCKKLRRFAFYLRQGGLTDLGLSYIGQYSPNVRWMLLGYVGESDEGLM 481 (592)
T ss_dssp CCSCCEEEEEECSCCSCCSSCCCHHHHHHHHHHCTTCCEEEEECCGGGCCHHHHHHHHHSCTTCCEEEECSCCSSHHHHH
T ss_pred CCCCcEEEEeecCCCccccCchHHHHHHHHHHhCCCCCEEEEecCCCCccHHHHHHHHHhCccceEeeccCCCCCHHHHH
Confidence 4678888885 6777742 3334666888888888743 3555433 33 347788888888888875 345
Q ss_pred CccCCCCcccccccccccCCCCCCccc---ccCceeeeecCCC
Q 008707 104 SYMGSLPNLQELHIENNSFVGEIPPAL---LTGKVIFKYDNNP 143 (557)
Q Consensus 104 ~~~~~l~~L~~l~l~~N~~~~~~p~~~---~~~~~~~~~~~n~ 143 (557)
..+..+++|+.|++++|.+++.....+ +..+..+.+++|+
T Consensus 482 ~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~ls~n~ 524 (592)
T 3ogk_B 482 EFSRGCPNLQKLEMRGCCFSERAIAAAVTKLPSLRYLWVQGYR 524 (592)
T ss_dssp HHHTCCTTCCEEEEESCCCBHHHHHHHHHHCSSCCEEEEESCB
T ss_pred HHHhcCcccCeeeccCCCCcHHHHHHHHHhcCccCeeECcCCc
Confidence 555677888888888888764322222 3456677777777
No 417
>2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6
Probab=97.36 E-value=0.00072 Score=66.69 Aligned_cols=142 Identities=14% Similarity=0.207 Sum_probs=79.6
Q ss_pred cccCCCCceEEEEEEEcCCcEEEEEEccCccchhHHHHHHHHHHHhhcCCCC--ccceeeE------EEecCeeEEEEEe
Q 008707 241 KKIGKGSFGSVYYGKMKDGKEVAVKIMADSCSHRTQQFVTEVALLSRIHHRN--LVPLIGY------CEEEHQRILVYEY 312 (557)
Q Consensus 241 ~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~il~~l~h~n--Iv~~~~~------~~~~~~~~lv~e~ 312 (557)
+.|+.|....+|+....+| .+++|+.... .....+..|+.+++.+...+ +.+++.. ....+..+++|+|
T Consensus 28 ~~i~~G~~n~~~~v~~~~g-~~vlk~~~~~--~~~~~l~~e~~~l~~L~~~g~~vP~~~~~~~g~~~~~~~g~~~~l~~~ 104 (322)
T 2ppq_A 28 KGIAEGVENSNFLLHTTKD-PLILTLYEKR--VEKNDLPFFLGLMQHLAAKGLSCPLPLPRKDGELLGELSGRPAALISF 104 (322)
T ss_dssp EEECC---EEEEEEEESSC-CEEEEEECC-----CCHHHHHHHHHHHHHHTTCCCCCBCCBTTCCSCEEETTEEEEEEEC
T ss_pred eccCCCcccceEEEEeCCc-cEEEEEeCCC--CCHHHHHHHHHHHHHHHHCCCCCCcccCCCCCCEEEEECCEEEEEEEe
Confidence 4577788899999987655 6888987652 12234567888888774212 3333321 1234567899999
Q ss_pred cCCCChhh--------------hhhccC---CCC-----C-cCHHHHHH------------HHHHHHHHHHHHHc----C
Q 008707 313 MHNGTLRD--------------RLHGSV---NQK-----P-LDWLTRLQ------------IAHDAAKGLEYLHT----G 353 (557)
Q Consensus 313 ~~~gsL~~--------------~l~~~~---~~~-----~-l~~~~~~~------------i~~qia~aL~~LH~----~ 353 (557)
++|..+.. .++... ... . ..|..... +...+.+.++++++ .
T Consensus 105 l~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~l~~~l~~~~~~l~~~~~~~ 184 (322)
T 2ppq_A 105 LEGMWLRKPEAKHCREVGKALAAMHLASEGFEIKRPNALSVDGWKVLWDKSEERADEVEKGLREEIRPEIDYLAAHWPKD 184 (322)
T ss_dssp CCCBCCSSCCHHHHHHHHHHHHHHHHHTTTCCCCCBCTTSHHHHHHHHHHHGGGGGGTSTTHHHHHHHHHHHHHHHCCCS
T ss_pred CCCcCCCCCCHHHHHHHHHHHHHHHHHhccCCCcccCccChHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhCccc
Confidence 98865321 111110 000 0 11221100 01113444555542 1
Q ss_pred CCCCeEeeccCCCCEEeCCCCcEEEecccCcc
Q 008707 354 CNPGIIHRDVKSSNILLDINMRAKVSDFGLSR 385 (557)
Q Consensus 354 ~~~~ivH~dlk~~NIll~~~~~~kl~Dfgla~ 385 (557)
...+++|+|+++.||+++.+..+.|+||+.+.
T Consensus 185 ~~~~liHgDl~~~Nil~~~~~~~~lIDf~~a~ 216 (322)
T 2ppq_A 185 LPAGVIHADLFQDNVFFLGDELSGLIDFYFAC 216 (322)
T ss_dssp SCEEEECSCCCGGGEEEETTEEEEECCCTTCE
T ss_pred CCcccCCCCCCccCEEEeCCceEEEecchhcc
Confidence 13579999999999999877656899998765
No 418
>3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A*
Probab=97.30 E-value=0.0008 Score=67.98 Aligned_cols=140 Identities=17% Similarity=0.205 Sum_probs=82.6
Q ss_pred cccCCCCceEEEEEEEc--------CCcEEEEEEccCccchhHHHHHHHHHHHhhcC-CCCccceeeEEEecCeeEEEEE
Q 008707 241 KKIGKGSFGSVYYGKMK--------DGKEVAVKIMADSCSHRTQQFVTEVALLSRIH-HRNLVPLIGYCEEEHQRILVYE 311 (557)
Q Consensus 241 ~~lG~G~~g~Vy~~~~~--------~~~~vavK~~~~~~~~~~~~~~~E~~il~~l~-h~nIv~~~~~~~~~~~~~lv~e 311 (557)
+.+..|....+|+.... +++.+++|+.... ......+.+|.++++.|. +.-..++++.+.+ .+|||
T Consensus 56 ~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlR~~g~~-~~~~~~~~rE~~vl~~L~~~gv~P~ll~~~~~----g~v~e 130 (379)
T 3feg_A 56 YPVSGGLSNLLFRCSLPDHLPSVGEEPREVLLRLYGAI-LQGVDSLVLESVMFAILAERSLGPQLYGVFPE----GRLEQ 130 (379)
T ss_dssp EEC-----CCEEEEECCTTSCCCSSCCSEEEEEECC----CCHHHHHHHHHHHHHHHHTTSSCCEEEEETT----EEEEE
T ss_pred EEcCCcccccEEEEEeCCCccccCCCCCeEEEEECCCc-cchHHHHHHHHHHHHHHHhcCCCCeEEEEcCC----ccEEE
Confidence 45777888889998875 2478999986332 223455668999999884 4334666766543 28999
Q ss_pred ecCCCChhhh-----------------hhccC--CCCCcC--HHHHHHHHHHHHH-------------------HHHHHH
Q 008707 312 YMHNGTLRDR-----------------LHGSV--NQKPLD--WLTRLQIAHDAAK-------------------GLEYLH 351 (557)
Q Consensus 312 ~~~~gsL~~~-----------------l~~~~--~~~~l~--~~~~~~i~~qia~-------------------aL~~LH 351 (557)
|++|.+|..- ++... -..... +.++.++..++.. .+..|.
T Consensus 131 ~i~G~~l~~~~l~~p~~~~~ia~~La~LH~~~~~~~~~~~~l~~~i~~w~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~ 210 (379)
T 3feg_A 131 YIPSRPLKTQELREPVLSAAIATKMAQFHGMEMPFTKEPHWLFGTMERYLKQIQDLPPTGLPEMNLLEMYSLKDEMGNLR 210 (379)
T ss_dssp CCSEEECCGGGGGCHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSCCSCCHHHHTTHHHHHHHHH
T ss_pred EecCccCChhHhCCHHHHHHHHHHHHHHhCCCCCCCCCcccHHHHHHHHHHHHHhccCcccchhhhhhhHHHHHHHHHHH
Confidence 9988554311 11110 011122 3444545444322 123332
Q ss_pred ----c-CCCCCeEeeccCCCCEEeCCC----CcEEEecccCcc
Q 008707 352 ----T-GCNPGIIHRDVKSSNILLDIN----MRAKVSDFGLSR 385 (557)
Q Consensus 352 ----~-~~~~~ivH~dlk~~NIll~~~----~~~kl~Dfgla~ 385 (557)
. .....++|+|+.+.||+++.+ +.+.++||..+.
T Consensus 211 ~~L~~~~~~~~~~H~D~~~~Nil~~~~~~~~~~~~~IDwE~a~ 253 (379)
T 3feg_A 211 KLLESTPSPVVFCHNDIQEGNILLLSEPENADSLMLVDFEYSS 253 (379)
T ss_dssp HHHHTSCCCEEEECSCCCGGGEEEESCC---CCEEECCCTTCE
T ss_pred HHHhhcCCCcEEEcCCCCCCeEEEcCCCCccCcEEEEecccCC
Confidence 1 123579999999999999876 789999998765
No 419
>1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8
Probab=97.26 E-value=0.00077 Score=69.53 Aligned_cols=72 Identities=14% Similarity=0.240 Sum_probs=49.4
Q ss_pred cccCCCCceEEEEEEEcC--------CcEEEEEEccCccchhHHHHHHHHHHHhhcC-CCCccceeeEEEecCeeEEEEE
Q 008707 241 KKIGKGSFGSVYYGKMKD--------GKEVAVKIMADSCSHRTQQFVTEVALLSRIH-HRNLVPLIGYCEEEHQRILVYE 311 (557)
Q Consensus 241 ~~lG~G~~g~Vy~~~~~~--------~~~vavK~~~~~~~~~~~~~~~E~~il~~l~-h~nIv~~~~~~~~~~~~~lv~e 311 (557)
+.|+.|....||++...+ ++.+++|+..... ....+.+|..+++.+. +.-..++++.+.+ .+|+|
T Consensus 79 ~~l~gG~tN~~y~v~~~~~~~~~~~~~~~~vlRi~~~~~--~~~~li~E~~~l~~L~~~g~~P~l~~~~~~----g~v~e 152 (429)
T 1nw1_A 79 SRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFNPE--TESHLVAESVIFTLLSERHLGPKLYGIFSG----GRLEE 152 (429)
T ss_dssp EEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECSCC--CHHHHHHHHHHHHHHHHTTSSSCEEEEETT----EEEEC
T ss_pred EEeCCCcccceEEEEeCCCccccCCCCceEEEEEeCCCC--cHHHHHHHHHHHHHHHhCCCCCcEEEEeCC----CEEEE
Confidence 567888889999998753 5789999874321 1145557999999885 3333666765542 38999
Q ss_pred ecCCCCh
Q 008707 312 YMHNGTL 318 (557)
Q Consensus 312 ~~~~gsL 318 (557)
|++|.++
T Consensus 153 ~l~G~~l 159 (429)
T 1nw1_A 153 YIPSRPL 159 (429)
T ss_dssp CCCEEEC
T ss_pred EeCCccc
Confidence 9986443
No 420
>3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti}
Probab=97.24 E-value=0.00073 Score=66.08 Aligned_cols=71 Identities=10% Similarity=0.091 Sum_probs=44.1
Q ss_pred hcccCCCCceEEEEEEEcCCcEEEEEEccCccchhHHHHHHHHHHHhhcCCCCc-cceeeEEEecCeeEEEEEec-CCCC
Q 008707 240 CKKIGKGSFGSVYYGKMKDGKEVAVKIMADSCSHRTQQFVTEVALLSRIHHRNL-VPLIGYCEEEHQRILVYEYM-HNGT 317 (557)
Q Consensus 240 ~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~il~~l~h~nI-v~~~~~~~~~~~~~lv~e~~-~~gs 317 (557)
.+.|+.|....+|+. ..+++|+....... .-...+|+.+++.+...++ .+++++. .+.-++++||+ +|.+
T Consensus 23 i~~l~gG~tN~~~~~-----~~~vlR~~~~~~~~-~~~r~~E~~~l~~l~~~g~~P~~~~~~--~~~~~~v~e~i~~g~~ 94 (301)
T 3dxq_A 23 PLERLGGLTNLVFRA-----GDLCLRIPGKGTEE-YINRANEAVAAREAAKAGVSPEVLHVD--PATGVMVTRYIAGAQT 94 (301)
T ss_dssp CEEEESCSSEEEEEE-----TTEEEEEECC-----CCCHHHHHHHHHHHHHTTSSCCEEEEC--TTTCCEEEECCTTCEE
T ss_pred eeEcCCcccccccee-----eeEEEECCCCCccc-eeCHHHHHHHHHHHHHcCCCCceEEEE--CCCCEEEEeecCCCcc
Confidence 367888999999999 56888887543211 1123468888887743223 4555543 33457899999 6544
Q ss_pred h
Q 008707 318 L 318 (557)
Q Consensus 318 L 318 (557)
+
T Consensus 95 l 95 (301)
T 3dxq_A 95 M 95 (301)
T ss_dssp C
T ss_pred C
Confidence 4
No 421
>1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6
Probab=97.20 E-value=0.0034 Score=61.96 Aligned_cols=141 Identities=13% Similarity=0.170 Sum_probs=81.3
Q ss_pred ccCCCCceEEEEEEEcCCcEEEEEEccCccchhHHHHHHHHHHHhhcCCC--CccceeeE-----EEecCeeEEEEEecC
Q 008707 242 KIGKGSFGSVYYGKMKDGKEVAVKIMADSCSHRTQQFVTEVALLSRIHHR--NLVPLIGY-----CEEEHQRILVYEYMH 314 (557)
Q Consensus 242 ~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~il~~l~h~--nIv~~~~~-----~~~~~~~~lv~e~~~ 314 (557)
.++ |....||+....+|+.+++|...... .....+..|..+++.+... .+++++.. ....+..+++|++++
T Consensus 33 ~l~-g~~n~~y~v~~~~g~~~vlK~~~~~~-~~~~~~~~E~~~~~~L~~~g~~vp~~~~~~g~~~~~~~g~~~~l~~~i~ 110 (328)
T 1zyl_A 33 PLN-SYENRVYQFQDEDRRRFVVKFYRPER-WTADQILEEHQFALQLVNDEVPVAAPVAFNGQTLLNHQGFYFAVFPSVG 110 (328)
T ss_dssp EEC-CSSSEEEEECCTTCCCEEEEEECTTT-SCHHHHHHHHHHHHHHHHTTCSBCCCCCBTTBSCEEETTEEEEEEECCC
T ss_pred eec-CcccceEEEEcCCCCEEEEEEcCCCC-CCHHHHHHHHHHHHHHHHcCCeecceeecCCcEEEEECCEEEEEEEecC
Confidence 466 77789999887778789999876331 2345667788888888421 24444443 223456688999998
Q ss_pred CCChhh--------------hhhccC------CCCCcCHHHH----------------------HHHHHHHHHHHHHHHc
Q 008707 315 NGTLRD--------------RLHGSV------NQKPLDWLTR----------------------LQIAHDAAKGLEYLHT 352 (557)
Q Consensus 315 ~gsL~~--------------~l~~~~------~~~~l~~~~~----------------------~~i~~qia~aL~~LH~ 352 (557)
|..+.. .++... ......+... ...+.+++..+.-+-.
T Consensus 111 G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 190 (328)
T 1zyl_A 111 GRQFEADNIDQMEAVGRYLGRMHQTGRKQLFIHRPTIGLNEYLIEPRKLFEDATLIPSGLKAAFLKATDELIAAVTAHWR 190 (328)
T ss_dssp CEECCSSCHHHHHHHHHHHHHHHHHHTSSCCSSSCBCSHHHHTHHHHHHHHTCSSSCTTTHHHHHHHHHHHHHHHHHHCC
T ss_pred CCCCCCCCHHHHHHHHHHHHHHHHhhccCCCccCCCCCHHHHHhhHHHHHhhcCcCCHHHHHHHHHHHHHHHHHHHHHhh
Confidence 744310 011100 0111222111 1111122222222211
Q ss_pred -CCCCCeEeeccCCCCEEeCCCCcEEEecccCccc
Q 008707 353 -GCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQ 386 (557)
Q Consensus 353 -~~~~~ivH~dlk~~NIll~~~~~~kl~Dfgla~~ 386 (557)
.....++|||+++.||+++ + .+.|+||+.+..
T Consensus 191 ~~~~~~l~HgD~~~~Nil~~-~-~~~lIDfe~a~~ 223 (328)
T 1zyl_A 191 EDFTVLRLHGDCHAGNILWR-D-GPMFVDLDDARN 223 (328)
T ss_dssp SCSCCEECCSSCSGGGEEES-S-SEEECCCTTCCE
T ss_pred hcCCeeeeeCCCCcccEeEc-C-CCEEEECCCCCc
Confidence 1236789999999999999 4 899999987653
No 422
>3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP}
Probab=97.16 E-value=0.0023 Score=63.48 Aligned_cols=142 Identities=12% Similarity=0.065 Sum_probs=73.2
Q ss_pred cccCCCCceE-EEEEEEcCCcEEEEEEccCccchhHHHHHHHHHHHhhcC-C-CCccceeeEEEecCeeEEEEEecCCCC
Q 008707 241 KKIGKGSFGS-VYYGKMKDGKEVAVKIMADSCSHRTQQFVTEVALLSRIH-H-RNLVPLIGYCEEEHQRILVYEYMHNGT 317 (557)
Q Consensus 241 ~~lG~G~~g~-Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~il~~l~-h-~nIv~~~~~~~~~~~~~lv~e~~~~gs 317 (557)
+.|+.|.... +|+....+++.+++|....... ..+..|+.+++.+. + -.+.+++.+....+ +++||++.+..
T Consensus 24 ~~l~gg~s~~~~~r~~~~~~~~~vlk~~~~~~~---~~~~~e~~~l~~L~~~g~~vP~v~~~d~~~g--~ll~e~l~~~~ 98 (333)
T 3csv_A 24 TPLAGDASSRRYQRLRSPTGAKAVLMDWSPEEG---GDTQPFVDLAQYLRNLDISAPEIYAEEHARG--LLLIEDLGDAL 98 (333)
T ss_dssp CC--------CCEEEECTTCCEEEEEECCTTTT---CCSHHHHHHHHHHHHTTCBCCCEEEEETTTT--EEEECCCCSCB
T ss_pred eECCCCCCCceEEEEEcCCCCeEEEEECCCCCC---ccccHHHHHHHHHHhCCCCCCceeeecCCCC--EEEEeeCCCcc
Confidence 3455555444 6677654467788876543211 23445777777774 2 23556666533333 78999997666
Q ss_pred hhhhhhcc---------------------CC--CCCcCHHHHH-------H-H------------HHHHHHHHHHHH---
Q 008707 318 LRDRLHGS---------------------VN--QKPLDWLTRL-------Q-I------------AHDAAKGLEYLH--- 351 (557)
Q Consensus 318 L~~~l~~~---------------------~~--~~~l~~~~~~-------~-i------------~~qia~aL~~LH--- 351 (557)
+.+.+... .. ...+...... . + ...+...++.+.
T Consensus 99 l~~~l~~~~~~~~~~~~~~~~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~l~~~~ 178 (333)
T 3csv_A 99 FTEVINNDPAQEMPLYRAAVDLLIHLHDAQTPELARLDPETLSEMTRLAFSEYRYAILGDAAEDNRKRFEHRFAQILSAQ 178 (333)
T ss_dssp HHHHHHHCGGGHHHHHHHHHHHHHHHHTSCCCCCCBCCHHHHHHTTTHHHHTHHHHHHSSCCHHHHHHHHHHHHHHHHHH
T ss_pred hHHHhcCCCccHHHHHHHHHHHHHHHhcCCCccCCccCHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHhc
Confidence 65433211 00 0111111100 0 0 001112222221
Q ss_pred cCCCCCeEeeccCCCCEEeCCC----CcEEEecccCcccc
Q 008707 352 TGCNPGIIHRDVKSSNILLDIN----MRAKVSDFGLSRQA 387 (557)
Q Consensus 352 ~~~~~~ivH~dlk~~NIll~~~----~~~kl~Dfgla~~~ 387 (557)
......++|||+.+.||+++.+ +.+.|+||+.+...
T Consensus 179 ~~~~~~lvHgD~~~~Nil~~~~~~~~~~~~lIDf~~a~~G 218 (333)
T 3csv_A 179 LEGDMVFVHRDFHAQNLLWLPEREGLARVGVIDFQDAKLG 218 (333)
T ss_dssp CCSCCEEECSCCSGGGEEECTTSCGGGGEEECCCTTCEEE
T ss_pred ccCCCeeEeCCcCcccEEeccCcCCCCCeEEEeCCCcCcC
Confidence 1123689999999999999875 67999999987653
No 423
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=97.15 E-value=0.00014 Score=78.30 Aligned_cols=80 Identities=13% Similarity=0.096 Sum_probs=59.6
Q ss_pred CceEEEEecCCCcccc----CCccccCCCCCcEEECcCCCCCCCC----C-CccCCCCCcEEEecCccccCcCCCccCCC
Q 008707 39 PRITKIALSGKNLKGE----IPPELKNMEALTELWLDGNFLTGPL----P-DMSRLIDLRIVHLENNELTGSLPSYMGSL 109 (557)
Q Consensus 39 ~~l~~L~L~~n~l~~~----~p~~~~~l~~L~~L~l~~N~l~~~~----~-~~~~l~~L~~L~l~~N~l~~~~p~~~~~l 109 (557)
++|++|+|++|.+++. ++..+.++++|+.|+|++|.+++.. + .+.++++|+.|+|++|.+. .+|..+..+
T Consensus 164 ~~L~~L~L~~~~~~~~~~~~l~~~~~~~~~L~~L~L~~n~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~-~l~~~~~~~ 242 (592)
T 3ogk_B 164 RKIKTLLMEESSFSEKDGKWLHELAQHNTSLEVLNFYMTEFAKISPKDLETIARNCRSLVSVKVGDFEIL-ELVGFFKAA 242 (592)
T ss_dssp TTCSEEECTTCEEECCCSHHHHHHHHHCCCCCEEECTTCCCSSCCHHHHHHHHHHCTTCCEEECSSCBGG-GGHHHHHHC
T ss_pred CCCCEEECccccccCcchhHHHHHHhcCCCccEEEeeccCCCccCHHHHHHHHhhCCCCcEEeccCccHH-HHHHHHhhh
Confidence 6789999999988755 4444567888999999999887443 2 2567888999999998887 466666667
Q ss_pred Cccccccccc
Q 008707 110 PNLQELHIEN 119 (557)
Q Consensus 110 ~~L~~l~l~~ 119 (557)
++|+.|++++
T Consensus 243 ~~L~~L~l~~ 252 (592)
T 3ogk_B 243 ANLEEFCGGS 252 (592)
T ss_dssp TTCCEEEECB
T ss_pred hHHHhhcccc
Confidence 7777777764
No 424
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=97.05 E-value=0.0001 Score=65.61 Aligned_cols=83 Identities=12% Similarity=0.103 Sum_probs=63.1
Q ss_pred CceEEEEecCCCccccCCccccCCCCCcEEECcCCC-CCCC-CCCccCC----CCCcEEEecCcc-ccCcCCCccCCCCc
Q 008707 39 PRITKIALSGKNLKGEIPPELKNMEALTELWLDGNF-LTGP-LPDMSRL----IDLRIVHLENNE-LTGSLPSYMGSLPN 111 (557)
Q Consensus 39 ~~l~~L~L~~n~l~~~~p~~~~~l~~L~~L~l~~N~-l~~~-~~~~~~l----~~L~~L~l~~N~-l~~~~p~~~~~l~~ 111 (557)
..|+.|||+++.++..=-..+.++++|+.|+|+++. |+.. +..+..+ ++|+.|+|++|. ++..-=..+.++++
T Consensus 61 ~~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C~~ITD~Gl~~L~~~~~ 140 (176)
T 3e4g_A 61 YKIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISCGNVTDKGIIALHHFRN 140 (176)
T ss_dssp CCEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESCTTCCHHHHHHGGGCTT
T ss_pred ceEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCCCcCCHHHHHHHhcCCC
Confidence 469999999999885434567899999999999995 6542 2235554 479999999985 76322234678899
Q ss_pred cccccccccc
Q 008707 112 LQELHIENNS 121 (557)
Q Consensus 112 L~~l~l~~N~ 121 (557)
|+.|++++..
T Consensus 141 L~~L~L~~c~ 150 (176)
T 3e4g_A 141 LKYLFLSDLP 150 (176)
T ss_dssp CCEEEEESCT
T ss_pred CCEEECCCCC
Confidence 9999999875
No 425
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=97.03 E-value=6.5e-05 Score=80.97 Aligned_cols=82 Identities=12% Similarity=0.176 Sum_probs=44.7
Q ss_pred ceEEEEecCCCccccCCcccc-CCCCCcEEECcCC-CCCCC-CCC-ccCCCCCcEEEecCccccCcCCCcc----CCCCc
Q 008707 40 RITKIALSGKNLKGEIPPELK-NMEALTELWLDGN-FLTGP-LPD-MSRLIDLRIVHLENNELTGSLPSYM----GSLPN 111 (557)
Q Consensus 40 ~l~~L~L~~n~l~~~~p~~~~-~l~~L~~L~l~~N-~l~~~-~~~-~~~l~~L~~L~l~~N~l~~~~p~~~----~~l~~ 111 (557)
+|+.|+|++|.+++..+..+. .+++|+.|+|++| .++.. ++. +.++++|+.|+|++|.+++..+..+ ..+++
T Consensus 106 ~L~~L~L~~~~~~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~~~~ 185 (594)
T 2p1m_B 106 WLEEIRLKRMVVTDDCLELIAKSFKNFKVLVLSSCEGFSTDGLAAIAATCRNLKELDLRESDVDDVSGHWLSHFPDTYTS 185 (594)
T ss_dssp TCCEEEEESCBCCHHHHHHHHHHCTTCCEEEEESCEEEEHHHHHHHHHHCTTCCEEECTTCEEECCCGGGGGGSCTTCCC
T ss_pred CCCeEEeeCcEEcHHHHHHHHHhCCCCcEEeCCCcCCCCHHHHHHHHHhCCCCCEEeCcCCccCCcchHHHHHHhhcCCc
Confidence 566666666666655554443 4566666666666 33331 222 3356666666666666554333222 24456
Q ss_pred cccccccccc
Q 008707 112 LQELHIENNS 121 (557)
Q Consensus 112 L~~l~l~~N~ 121 (557)
|+.|++++|.
T Consensus 186 L~~L~l~~~~ 195 (594)
T 2p1m_B 186 LVSLNISCLA 195 (594)
T ss_dssp CCEEECTTCC
T ss_pred CcEEEecccC
Confidence 6666666665
No 426
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=96.88 E-value=6e-05 Score=81.27 Aligned_cols=105 Identities=16% Similarity=0.149 Sum_probs=76.3
Q ss_pred CCceEEEEec--C----CCccccCC------ccccCCCCCcEEECcCCCCCCCCC-CccC-CCCCcEEEecCccccCcCC
Q 008707 38 PPRITKIALS--G----KNLKGEIP------PELKNMEALTELWLDGNFLTGPLP-DMSR-LIDLRIVHLENNELTGSLP 103 (557)
Q Consensus 38 p~~l~~L~L~--~----n~l~~~~p------~~~~~l~~L~~L~l~~N~l~~~~~-~~~~-l~~L~~L~l~~N~l~~~~p 103 (557)
.++|+.|+|+ + |.++ ..| ..+.++++|+.|+|++ .++.... .+.. +++|+.|+|++|.+++..+
T Consensus 396 ~~~L~~L~L~~~~~~~~~~l~-~~~~~~~~~~l~~~~~~L~~L~L~~-~l~~~~~~~l~~~~~~L~~L~L~~~~i~~~~~ 473 (594)
T 2p1m_B 396 RPNMTRFRLCIIEPKAPDYLT-LEPLDIGFGAIVEHCKDLRRLSLSG-LLTDKVFEYIGTYAKKMEMLSVAFAGDSDLGM 473 (594)
T ss_dssp CTTCCEEEEEESSTTCCCTTT-CCCTHHHHHHHHHHCTTCCEEECCS-SCCHHHHHHHHHHCTTCCEEEEESCCSSHHHH
T ss_pred CCCcceeEeecccCCCccccc-CCchhhHHHHHHhhCCCccEEeecC-cccHHHHHHHHHhchhccEeeccCCCCcHHHH
Confidence 4789999999 4 5666 222 2367789999999987 6665433 4554 8899999999999976555
Q ss_pred Ccc-CCCCcccccccccccCCCCCCccc---ccCceeeeecCCCc
Q 008707 104 SYM-GSLPNLQELHIENNSFVGEIPPAL---LTGKVIFKYDNNPK 144 (557)
Q Consensus 104 ~~~-~~l~~L~~l~l~~N~~~~~~p~~~---~~~~~~~~~~~n~~ 144 (557)
..+ ..+++|+.|++++|.+++.....+ +..+..+.+.+|+.
T Consensus 474 ~~l~~~~~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~l~~~~~ 518 (594)
T 2p1m_B 474 HHVLSGCDSLRKLEIRDCPFGDKALLANASKLETMRSLWMSSCSV 518 (594)
T ss_dssp HHHHHHCTTCCEEEEESCSCCHHHHHHTGGGGGGSSEEEEESSCC
T ss_pred HHHHhcCCCcCEEECcCCCCcHHHHHHHHHhCCCCCEEeeeCCCC
Confidence 555 568999999999999964333322 24566778888874
No 427
>3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside phosphotransferase, antibiotic resistance; HET: MES PG4; 1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A* 3q2m_A*
Probab=96.88 E-value=0.0052 Score=61.09 Aligned_cols=68 Identities=13% Similarity=0.244 Sum_probs=44.7
Q ss_pred CCCCceEEEEEEEcCCcEEEEEEccCccchhHHHHHHHHHHHhhcC---CCCccceeeE------EEecCeeEEEEEecC
Q 008707 244 GKGSFGSVYYGKMKDGKEVAVKIMADSCSHRTQQFVTEVALLSRIH---HRNLVPLIGY------CEEEHQRILVYEYMH 314 (557)
Q Consensus 244 G~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~il~~l~---h~nIv~~~~~------~~~~~~~~lv~e~~~ 314 (557)
|.|....||+....+| .+++|+...... ..|+.+++.|. -|.+++++.. ....+..+++|+|++
T Consensus 32 G~g~~N~vy~v~~~~g-~~vLK~~~~~~~------~~E~~~l~~L~~~g~~~vp~pi~~~~G~~~~~~~g~~~~l~~~i~ 104 (339)
T 3i1a_A 32 GADTNAFAYQADSESK-SYFIKLKYGYHD------EINLSIIRLLHDSGIKEIIFPIHTLEAKLFQQLKHFKIIAYPFIH 104 (339)
T ss_dssp TSCSSCEEEEEECSSC-EEEEEEEECSSC------CHHHHHHHHHHHTTCCSSCCCCCCTTSCSSEECSSEEEEEEECCC
T ss_pred cCccccceEEEEeCCC-CEEEEEecCccc------hHHHHHHHHHHhcCCcccccceecCCCCEEEEECCEEEEEEeccC
Confidence 4444679999987767 899998765331 35666666663 2324555532 234567899999998
Q ss_pred CCCh
Q 008707 315 NGTL 318 (557)
Q Consensus 315 ~gsL 318 (557)
|..+
T Consensus 105 G~~~ 108 (339)
T 3i1a_A 105 APNG 108 (339)
T ss_dssp CCBT
T ss_pred CCcC
Confidence 8655
No 428
>3c5i_A Choline kinase; choline, kinase, malaria, transferase, structural genomics, structural genomics consortium; 2.20A {Plasmodium knowlesi} PDB: 3fi8_A*
Probab=96.84 E-value=0.0031 Score=63.55 Aligned_cols=72 Identities=13% Similarity=0.173 Sum_probs=44.1
Q ss_pred cccCCCCceEEEEEEEcC---------CcEEEEEEccCccchhHHHHHHHHHHHhhcCCCC-ccceeeEEEecCeeEEEE
Q 008707 241 KKIGKGSFGSVYYGKMKD---------GKEVAVKIMADSCSHRTQQFVTEVALLSRIHHRN-LVPLIGYCEEEHQRILVY 310 (557)
Q Consensus 241 ~~lG~G~~g~Vy~~~~~~---------~~~vavK~~~~~~~~~~~~~~~E~~il~~l~h~n-Iv~~~~~~~~~~~~~lv~ 310 (557)
+.++.|....+|+....+ ++.+++|+....... ......|.++++.+...+ +.++++.. . -++||
T Consensus 39 ~~l~~G~~N~~y~v~~~~~~~~~~~~~~~~~vlRi~~~~~~~-~~~~~~E~~~l~~L~~~g~~P~~~~~~--~--~~~v~ 113 (369)
T 3c5i_A 39 KQILSGLTNQLFEVGLKEETANNYNSIRTRVLFRIYGKHVDE-LYNTISEFEVYKTMSKYKIAPQLLNTF--N--GGRIE 113 (369)
T ss_dssp EEC----CCEEEEEEECHHHHTTCTTSCCEEEEEECCTTGGG-TSCHHHHHHHHHHHHHTTSSCCEEEEE--T--TEEEE
T ss_pred EEeCCcccceEEEEEeCCCCcccccCCCceEEEEecCCCccc-eecHHHHHHHHHHHHhcCCCCceEEec--C--CcEEE
Confidence 567888888999998754 268889986543221 112357888888885333 44666544 2 36899
Q ss_pred EecCCCC
Q 008707 311 EYMHNGT 317 (557)
Q Consensus 311 e~~~~gs 317 (557)
||++|..
T Consensus 114 e~i~G~~ 120 (369)
T 3c5i_A 114 EWLYGDP 120 (369)
T ss_dssp ECCCSEE
T ss_pred EEecCCc
Confidence 9998754
No 429
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=96.81 E-value=0.0015 Score=55.13 Aligned_cols=57 Identities=25% Similarity=0.255 Sum_probs=34.7
Q ss_pred EEECcCCCCC--CCCCCccCCCCCcEEEecCccccCcCCC-ccCCCCcccccccccccCCCCCCcccccCceeeeecCCC
Q 008707 67 ELWLDGNFLT--GPLPDMSRLIDLRIVHLENNELTGSLPS-YMGSLPNLQELHIENNSFVGEIPPALLTGKVIFKYDNNP 143 (557)
Q Consensus 67 ~L~l~~N~l~--~~~~~~~~l~~L~~L~l~~N~l~~~~p~-~~~~l~~L~~l~l~~N~~~~~~p~~~~~~~~~~~~~~n~ 143 (557)
.++.+++.|+ .++..+. .+|+.|+|++|+|+ .+|. .|..+++|+. +.+.+||
T Consensus 12 ~v~Cs~~~L~~~~vP~~lp--~~l~~L~Ls~N~l~-~l~~~~f~~l~~L~~----------------------L~L~~NP 66 (130)
T 3rfe_A 12 LVDCGRRGLTWASLPTAFP--VDTTELVLTGNNLT-ALPPGLLDALPALRT----------------------AHLGANP 66 (130)
T ss_dssp EEECCSSCCCTTTSCSCCC--TTCSEEECTTSCCS-SCCTTTGGGCTTCCE----------------------EECCSSC
T ss_pred EEEeCCCCCccccCCCCCC--cCCCEEECCCCcCC-ccChhhhhhccccCE----------------------EEecCCC
Confidence 6777777776 4443332 34677777777777 4444 3445555544 4566778
Q ss_pred ccccc
Q 008707 144 KLHKE 148 (557)
Q Consensus 144 ~~~~~ 148 (557)
|.|++
T Consensus 67 ~~CdC 71 (130)
T 3rfe_A 67 WRCDC 71 (130)
T ss_dssp CBCSG
T ss_pred eeccC
Confidence 88875
No 430
>2qg7_A Ethanolamine kinase PV091845; malaria, SGC, structural genomics consortium, transferase; 2.41A {Plasmodium vivax}
Probab=96.81 E-value=0.0064 Score=62.98 Aligned_cols=73 Identities=11% Similarity=0.087 Sum_probs=47.2
Q ss_pred cccCCCCceEEEEEEEcC-CcEEEEEEccCccchhHHHHHHHHHHHhhcCCCCc-cceeeEEEecCeeEEEEEecCCCCh
Q 008707 241 KKIGKGSFGSVYYGKMKD-GKEVAVKIMADSCSHRTQQFVTEVALLSRIHHRNL-VPLIGYCEEEHQRILVYEYMHNGTL 318 (557)
Q Consensus 241 ~~lG~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~E~~il~~l~h~nI-v~~~~~~~~~~~~~lv~e~~~~gsL 318 (557)
+.|+.|....+|+....+ +..+++|+......... ...+|..+++.|...++ .++++.+. + .+||||++|.+|
T Consensus 114 ~~lsgG~tN~~y~v~~~~~~~~~vLRi~g~~~~~~i-dR~~E~~vl~~L~~~gl~P~ll~~~~--~--G~v~e~I~G~~l 188 (458)
T 2qg7_A 114 QIINGGITNILIKVKDMSKQAKYLIRLYGPKTDEII-NREREKKISCILYNKNIAKKIYVFFT--N--GRIEEFMDGYAL 188 (458)
T ss_dssp EEECC--CEEEEEEEETTTTEEEEEEEECC-CCSCS-CHHHHHHHHHHHTTSSSBCCEEEEET--T--EEEEECCCSEEC
T ss_pred EEcCCCeEeEEEEEEECCCCceEEEEECCCChhhhc-CHHHHHHHHHHHHhcCCCCCEEEEeC--C--eEEEEeeCCccC
Confidence 568889899999998875 47888998643221111 12478999999864444 56676663 2 359999987443
No 431
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=96.77 E-value=0.00017 Score=72.59 Aligned_cols=105 Identities=14% Similarity=0.222 Sum_probs=70.9
Q ss_pred CceEEEEecCCCccccCCcccc--CCCCCcEEECcC--CCCCCC------CCCc--cCCCCCcEEEecCccccCcCCCcc
Q 008707 39 PRITKIALSGKNLKGEIPPELK--NMEALTELWLDG--NFLTGP------LPDM--SRLIDLRIVHLENNELTGSLPSYM 106 (557)
Q Consensus 39 ~~l~~L~L~~n~l~~~~p~~~~--~l~~L~~L~l~~--N~l~~~------~~~~--~~l~~L~~L~l~~N~l~~~~p~~~ 106 (557)
++|+.|+|..|.+....-..+. .+++|+.|+|+. |...+. -+.+ ..+++|+.|+|.+|.+.+..+..+
T Consensus 193 ~~L~~L~L~~~~l~~~~l~~l~~~~lp~L~~L~L~~~~~~~~~~~~~~~l~~~l~~~~~p~Lr~L~L~~~~i~~~~~~~l 272 (362)
T 2ra8_A 193 PNLKSLEIISGGLPDSVVEDILGSDLPNLEKLVLYVGVEDYGFDGDMNVFRPLFSKDRFPNLKWLGIVDAEEQNVVVEMF 272 (362)
T ss_dssp TTCSEEEEECSBCCHHHHHHHHHSBCTTCCEEEEECBCGGGTCCSCGGGTGGGSCTTTCTTCCEEEEESCTTHHHHHHHH
T ss_pred CCCcEEEEecCCCChHHHHHHHHccCCCCcEEEEeccccccccchhHHHHHHHHhcCCCCCcCEEeCCCCCCchHHHHHH
Confidence 6899999999988754444444 789999999863 332221 1222 357899999999999875443323
Q ss_pred ---CCCCcccccccccccCCCC----CCccc--ccCceeeeecCCC
Q 008707 107 ---GSLPNLQELHIENNSFVGE----IPPAL--LTGKVIFKYDNNP 143 (557)
Q Consensus 107 ---~~l~~L~~l~l~~N~~~~~----~p~~~--~~~~~~~~~~~n~ 143 (557)
..+++|+.|+|+.|.+.+. ++..+ +..+..+.+.+|.
T Consensus 273 a~a~~~~~L~~LdLs~n~L~d~G~~~L~~~L~~l~~L~~L~L~~n~ 318 (362)
T 2ra8_A 273 LESDILPQLETMDISAGVLTDEGARLLLDHVDKIKHLKFINMKYNY 318 (362)
T ss_dssp HHCSSGGGCSEEECCSSCCBHHHHHHHHTTHHHHTTCSEEECCSBB
T ss_pred HhCccCCCCCEEECCCCCCChHHHHHHHhhcccCCcceEEECCCCc
Confidence 3578999999999998743 23221 2345666777664
No 432
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=96.77 E-value=0.0022 Score=65.47 Aligned_cols=100 Identities=15% Similarity=0.153 Sum_probs=73.9
Q ss_pred CceEEEEecCCCccccCCccccCCCCCcEEECcCCCCC-----CCCC-CccCCCCCcEEEecCccccCcCC-CccCCCCc
Q 008707 39 PRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLT-----GPLP-DMSRLIDLRIVHLENNELTGSLP-SYMGSLPN 111 (557)
Q Consensus 39 ~~l~~L~L~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~-----~~~~-~~~~l~~L~~L~l~~N~l~~~~p-~~~~~l~~ 111 (557)
.+|+.|.| .|+++..-+..|.++++|+.++|.+|.+. .+.+ .|.++++|+.++|++ .++ .++ ..|.+|++
T Consensus 248 ~~L~~i~l-p~~i~~I~~~aF~~c~~L~~l~l~~~~~~~~~~~~I~~~aF~~c~~L~~l~l~~-~i~-~I~~~aF~~c~~ 324 (401)
T 4fdw_A 248 SGITTVKL-PNGVTNIASRAFYYCPELAEVTTYGSTFNDDPEAMIHPYCLEGCPKLARFEIPE-SIR-ILGQGLLGGNRK 324 (401)
T ss_dssp CCCSEEEE-ETTCCEECTTTTTTCTTCCEEEEESSCCCCCTTCEECTTTTTTCTTCCEECCCT-TCC-EECTTTTTTCCS
T ss_pred CCccEEEe-CCCccEEChhHhhCCCCCCEEEeCCccccCCcccEECHHHhhCCccCCeEEeCC-ceE-EEhhhhhcCCCC
Confidence 46888888 55677344567889999999999998876 3444 589999999999994 477 555 46778899
Q ss_pred ccccccccccCCCCCCcccccC--ceeeeecCCC
Q 008707 112 LQELHIENNSFVGEIPPALLTG--KVIFKYDNNP 143 (557)
Q Consensus 112 L~~l~l~~N~~~~~~p~~~~~~--~~~~~~~~n~ 143 (557)
|+.+.+..| ++ .|+...|.+ +..+.+.+|.
T Consensus 325 L~~l~lp~~-l~-~I~~~aF~~~~L~~l~l~~n~ 356 (401)
T 4fdw_A 325 VTQLTIPAN-VT-QINFSAFNNTGIKEVKVEGTT 356 (401)
T ss_dssp CCEEEECTT-CC-EECTTSSSSSCCCEEEECCSS
T ss_pred ccEEEECcc-cc-EEcHHhCCCCCCCEEEEcCCC
Confidence 999999555 66 777766653 4555676664
No 433
>2yle_A Protein spire homolog 1; actin-binding protein, actin polymerization; 1.80A {Homo sapiens} PDB: 2ylf_A 3r7g_A 3rbw_A
Probab=96.65 E-value=0.01 Score=54.09 Aligned_cols=103 Identities=12% Similarity=0.062 Sum_probs=68.3
Q ss_pred ChhhhhhccCCCCCcCHHHHHHHHHHHHHHHHHHHcCCCCCeEeeccCCCCEEeCCCCcEEEecccCccccCCCCccccc
Q 008707 317 TLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEEDLTHISS 396 (557)
Q Consensus 317 sL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfgla~~~~~~~~~~~~ 396 (557)
+|.++|... +.++++.++|.++.|.+.+|.-+-.. ..-..+=+.|..|++..+|.|.+.+ ..+.
T Consensus 34 SL~eIL~~~--~~PlsEEqaWALc~Qc~~~L~~~~~~--~~~~~~i~~~~~i~l~~dG~V~f~~-~~s~----------- 97 (229)
T 2yle_A 34 SLEEILRLY--NQPINEEQAWAVCYQCCGSLRAAARR--RQPRHRVRSAAQIRVWRDGAVTLAP-AADD----------- 97 (229)
T ss_dssp EHHHHHHHH--TSCCCHHHHHHHHHHHHHHHHHHHHT--TCCCCCCCSGGGEEEETTSCEEECC-C--------------
T ss_pred cHHHHHHHc--CCCcCHHHHHHHHHHHHHHHHhhhhc--ccCCceecCCcceEEecCCceeccc-cccc-----------
Confidence 788988764 67899999999999999998876210 1112334567899999999988764 1110
Q ss_pred cccCCCCccCCcccCCCCCCcccceehhHHHHHHHHhCCCCC
Q 008707 397 VARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPV 438 (557)
Q Consensus 397 ~~~g~~~y~aPE~l~~~~~s~~~DvwslG~ll~elltg~~pf 438 (557)
.....+.+||... ...+.+.=|||+|+++|.-+--..|-
T Consensus 98 --~~~~~~~~pe~~~-~~~te~~~IysLG~tLY~ALDygL~e 136 (229)
T 2yle_A 98 --AGEPPPVAGKLGY-SQCMETEVIESLGIIIYKALDYGLKE 136 (229)
T ss_dssp -----------CCSS-SSSCHHHHHHHHHHHHHHHHTTTCCT
T ss_pred --ccccCCCChhhcc-ccchHHHHHHHHHHHHHHHhhcCCCc
Confidence 0133567888763 34567888999999999998755553
No 434
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=96.51 E-value=0.0029 Score=64.51 Aligned_cols=89 Identities=18% Similarity=0.224 Sum_probs=62.0
Q ss_pred CceEEEEecCCCccccCC-ccccCCCCCcEEECcCCCCCCCCC-CccCCCCCcEEEecCcccc-----CcCCCccCCCCc
Q 008707 39 PRITKIALSGKNLKGEIP-PELKNMEALTELWLDGNFLTGPLP-DMSRLIDLRIVHLENNELT-----GSLPSYMGSLPN 111 (557)
Q Consensus 39 ~~l~~L~L~~n~l~~~~p-~~~~~l~~L~~L~l~~N~l~~~~~-~~~~l~~L~~L~l~~N~l~-----~~~p~~~~~l~~ 111 (557)
++|+.|+|..| ++ .++ ..|.+ .+|+.++| .|.++.+.+ .|.++++|+.+++.+|.+. ..-+..|.+|++
T Consensus 226 ~~L~~l~l~~~-l~-~I~~~aF~~-~~L~~i~l-p~~i~~I~~~aF~~c~~L~~l~l~~~~~~~~~~~~I~~~aF~~c~~ 301 (401)
T 4fdw_A 226 SQLKTIEIPEN-VS-TIGQEAFRE-SGITTVKL-PNGVTNIASRAFYYCPELAEVTTYGSTFNDDPEAMIHPYCLEGCPK 301 (401)
T ss_dssp TTCCCEECCTT-CC-EECTTTTTT-CCCSEEEE-ETTCCEECTTTTTTCTTCCEEEEESSCCCCCTTCEECTTTTTTCTT
T ss_pred CCCCEEecCCC-cc-Ccccccccc-CCccEEEe-CCCccEEChhHhhCCCCCCEEEeCCccccCCcccEECHHHhhCCcc
Confidence 46778888764 55 444 44555 78888888 455666655 5888888888888887764 133446778888
Q ss_pred ccccccccccCCCCCCcccccC
Q 008707 112 LQELHIENNSFVGEIPPALLTG 133 (557)
Q Consensus 112 L~~l~l~~N~~~~~~p~~~~~~ 133 (557)
|+.+.+. |.+. .|+...|.+
T Consensus 302 L~~l~l~-~~i~-~I~~~aF~~ 321 (401)
T 4fdw_A 302 LARFEIP-ESIR-ILGQGLLGG 321 (401)
T ss_dssp CCEECCC-TTCC-EECTTTTTT
T ss_pred CCeEEeC-CceE-EEhhhhhcC
Confidence 8888888 4576 777777654
No 435
>3f2s_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics consortium, SGC, hemicholinium-3, alternative splicing, cytoplasm; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 3g15_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=96.48 E-value=0.0088 Score=60.63 Aligned_cols=141 Identities=18% Similarity=0.197 Sum_probs=82.0
Q ss_pred cccCCCCceEEEEEEEcC--------CcEEEEEEccCccch-----------h-------HHHHHHHHHHHhhcC-CCCc
Q 008707 241 KKIGKGSFGSVYYGKMKD--------GKEVAVKIMADSCSH-----------R-------TQQFVTEVALLSRIH-HRNL 293 (557)
Q Consensus 241 ~~lG~G~~g~Vy~~~~~~--------~~~vavK~~~~~~~~-----------~-------~~~~~~E~~il~~l~-h~nI 293 (557)
+.|..|-...+|+....+ ++.|.+++.-..... + .+....|..+++.+. +.-.
T Consensus 58 ~~l~gGlTN~~~~v~~~~~~~~~~~~~~~~llRi~G~~te~~~~~~~~~~~idR~~~~~~~~~~~~E~~~l~~L~~~Gi~ 137 (401)
T 3f2s_A 58 SVIRGGLSNMLFQCSLPDTTATLGDEPRKVLLRLYGAILQMRSCNKEGSEQAQKENEFQGAEAMVLESVMFAILAERSLG 137 (401)
T ss_dssp EEEECSSEEEEEEEECCTTCCCSSSCCSEEEEEEEEC-----------------------CHHHHHHHHHHHHHHHTTSS
T ss_pred EEcCCCccCceEEEEeCCCcccccCCCccEEEEeCCCCcccccccccccchhhhhhhhccchhhHHHHHHHHHHHhcCCC
Confidence 445567778899988753 367888886442211 0 112335888988884 5445
Q ss_pred cceeeEEEecCeeEEEEEecCCCChhh--h---------------hhccC--CCCCcC--HHHHHHHHHHHH--------
Q 008707 294 VPLIGYCEEEHQRILVYEYMHNGTLRD--R---------------LHGSV--NQKPLD--WLTRLQIAHDAA-------- 344 (557)
Q Consensus 294 v~~~~~~~~~~~~~lv~e~~~~gsL~~--~---------------l~~~~--~~~~l~--~~~~~~i~~qia-------- 344 (557)
.++++++.+ .+|+||++|-+|.. + ++... -..... +..+.++..++.
T Consensus 138 Pkl~~~~~~----G~i~efI~G~~L~~~dl~~p~~~~~iA~~L~~LH~~~~~~~~~~~~l~~~i~~~~~~l~~~~~~~~~ 213 (401)
T 3f2s_A 138 PKLYGIFPQ----GRLEQFIPSRRLDTEELSLPDISAEIAEKMATFHGMKMPFNKEPKWLFGTMEKYLKEVLRIKFTEES 213 (401)
T ss_dssp CCEEEEETT----EEEEECCCEEECCGGGGGSHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSHH
T ss_pred CeEEEEeCC----CeEEEecCCccCCHHHHhhHHHHHHHHHHHHHHhCCCCCCCCCcchHHHHHHHHHHHHHhccCcchh
Confidence 677777643 28999998754421 1 11110 011222 223333433321
Q ss_pred --------------HHHH----HHHc-CCCCCeEeeccCCCCEEeCCC------CcEEEecccCcc
Q 008707 345 --------------KGLE----YLHT-GCNPGIIHRDVKSSNILLDIN------MRAKVSDFGLSR 385 (557)
Q Consensus 345 --------------~aL~----~LH~-~~~~~ivH~dlk~~NIll~~~------~~~kl~Dfgla~ 385 (557)
.-+. +|.. .....++|+|+.+.||+++.+ +.+.++||..+.
T Consensus 214 ~~~~~~~~~~~~l~~e~~~l~~~l~~~~~~~v~~H~Dl~~~Nil~~~~~~~~~~~~~~lID~E~a~ 279 (401)
T 3f2s_A 214 RIKKLHKLLSYNLPLELENLRSLLESTPSPVVFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSS 279 (401)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHTSCCCEEEECSCCCGGGEEEETTGGGCSSSCEEECCCTTCE
T ss_pred hhhhhhhhhhHHHHHHHHHHHHHHhhcCCCeeEEeccCCcccEEEcCCcccCcccceEEEeeccCC
Confidence 1122 2222 123579999999999999876 789999998764
No 436
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=96.47 E-value=0.00026 Score=71.22 Aligned_cols=105 Identities=17% Similarity=0.149 Sum_probs=69.3
Q ss_pred CCCceEEEEecCCCccccCCccccCCCCCcEEECcCCCCCCCCC-Cc--cCCCCCcEEEecC--ccccCc-----CCCcc
Q 008707 37 TPPRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLP-DM--SRLIDLRIVHLEN--NELTGS-----LPSYM 106 (557)
Q Consensus 37 ~p~~l~~L~L~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~-~~--~~l~~L~~L~l~~--N~l~~~-----~p~~~ 106 (557)
.+|+|+.|+|++|.-. .++. +. +++|+.|+|..|.++...- .+ ..+++|+.|+|+. |...|. +...+
T Consensus 170 ~~P~L~~L~L~g~~~l-~l~~-~~-~~~L~~L~L~~~~l~~~~l~~l~~~~lp~L~~L~L~~~~~~~~~~~~~~~l~~~l 246 (362)
T 2ra8_A 170 AMPLLNNLKIKGTNNL-SIGK-KP-RPNLKSLEIISGGLPDSVVEDILGSDLPNLEKLVLYVGVEDYGFDGDMNVFRPLF 246 (362)
T ss_dssp TCTTCCEEEEECCBTC-BCCS-CB-CTTCSEEEEECSBCCHHHHHHHHHSBCTTCCEEEEECBCGGGTCCSCGGGTGGGS
T ss_pred cCCCCcEEEEeCCCCc-eecc-cc-CCCCcEEEEecCCCChHHHHHHHHccCCCCcEEEEeccccccccchhHHHHHHHH
Confidence 3579999999988422 3444 43 8999999999988764322 23 3789999999964 332211 11122
Q ss_pred --CCCCcccccccccccCCCCCCccc-----ccCceeeeecCCCc
Q 008707 107 --GSLPNLQELHIENNSFVGEIPPAL-----LTGKVIFKYDNNPK 144 (557)
Q Consensus 107 --~~l~~L~~l~l~~N~~~~~~p~~~-----~~~~~~~~~~~n~~ 144 (557)
..+++|+.|++.+|.+....+..+ ...+..+.++.|..
T Consensus 247 ~~~~~p~Lr~L~L~~~~i~~~~~~~la~a~~~~~L~~LdLs~n~L 291 (362)
T 2ra8_A 247 SKDRFPNLKWLGIVDAEEQNVVVEMFLESDILPQLETMDISAGVL 291 (362)
T ss_dssp CTTTCTTCCEEEEESCTTHHHHHHHHHHCSSGGGCSEEECCSSCC
T ss_pred hcCCCCCcCEEeCCCCCCchHHHHHHHhCccCCCCCEEECCCCCC
Confidence 357899999999999874333222 33566677777753
No 437
>3mes_A Choline kinase; malaria, structural genomics, structural genomics consortium, SGC, transferase; HET: ADP DME PT3; 2.35A {Cryptosporidium parvum}
Probab=95.13 E-value=0.06 Score=55.00 Aligned_cols=73 Identities=11% Similarity=0.124 Sum_probs=48.0
Q ss_pred cccCCCCceEEEEEEEcC--------CcEEEEEEccCccchhHHHHHHHHHHHhhcC-CCCccceeeEEEecCeeEEEEE
Q 008707 241 KKIGKGSFGSVYYGKMKD--------GKEVAVKIMADSCSHRTQQFVTEVALLSRIH-HRNLVPLIGYCEEEHQRILVYE 311 (557)
Q Consensus 241 ~~lG~G~~g~Vy~~~~~~--------~~~vavK~~~~~~~~~~~~~~~E~~il~~l~-h~nIv~~~~~~~~~~~~~lv~e 311 (557)
+.+..|....+|+....+ ++.+++|+....... .-...+|.++++.+. +.-..++++.+. -++|||
T Consensus 76 ~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlRi~g~~t~~-~idR~~E~~~l~~L~~~gi~P~l~~~~~----~~~I~e 150 (424)
T 3mes_A 76 KQIFSGLTNQLFVVSIVNESMSLSLKHPRILFRIYGKHVGK-FYDSKVELDVFRYLSNINIAPNIIADFP----EGRIEE 150 (424)
T ss_dssp EEECCCSSSEEEEEEECCC-----CCCSEEEEEECCCCC-C-CCCHHHHHHHHHHHHHTTSSCCEEEEET----TEEEEE
T ss_pred EEcCCCcccceEEEEeCCCcccccCCCCeEEEEECCCCcch-hcCHHHHHHHHHHHHhcCCCCCEEEEcC----CCEEEE
Confidence 567778888999998763 578999986543211 112347888888884 333455565332 268999
Q ss_pred ecCCCCh
Q 008707 312 YMHNGTL 318 (557)
Q Consensus 312 ~~~~gsL 318 (557)
|++|..|
T Consensus 151 fI~G~~l 157 (424)
T 3mes_A 151 FIDGEPL 157 (424)
T ss_dssp CCCSEEC
T ss_pred EeCCccC
Confidence 9988653
No 438
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=94.91 E-value=0.005 Score=55.66 Aligned_cols=85 Identities=13% Similarity=0.155 Sum_probs=60.8
Q ss_pred CCceEEEEecCC-Cccc----cCCccccCCCCCcEEECcCCCCCCC--CC---CccCCCCCcEEEecCccccCc----CC
Q 008707 38 PPRITKIALSGK-NLKG----EIPPELKNMEALTELWLDGNFLTGP--LP---DMSRLIDLRIVHLENNELTGS----LP 103 (557)
Q Consensus 38 p~~l~~L~L~~n-~l~~----~~p~~~~~l~~L~~L~l~~N~l~~~--~~---~~~~l~~L~~L~l~~N~l~~~----~p 103 (557)
.+.|++|+|++| .|.. .+-+.+..-+.|+.|+|++|+|... .. .+..-+.|+.|+|++|+|... +-
T Consensus 40 n~~L~~L~L~~nn~igd~ga~~la~aL~~N~~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig~~Ga~ala 119 (197)
T 1pgv_A 40 DTDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPELLARLL 119 (197)
T ss_dssp CSSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHHHHHHH
T ss_pred CCCccEEECCCCCCCCHHHHHHHHHHHhhCCCcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCCHHHHHHHH
Confidence 367899999986 6652 2445566678999999999999743 11 244567899999999999732 33
Q ss_pred CccCCCCcccccccccccC
Q 008707 104 SYMGSLPNLQELHIENNSF 122 (557)
Q Consensus 104 ~~~~~l~~L~~l~l~~N~~ 122 (557)
..+..-+.|+.|+|++|..
T Consensus 120 ~aL~~N~tL~~L~L~n~~~ 138 (197)
T 1pgv_A 120 RSTLVTQSIVEFKADNQRQ 138 (197)
T ss_dssp HHTTTTCCCSEEECCCCSS
T ss_pred HHHhhCCceeEEECCCCcC
Confidence 4455556799999987643
No 439
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=94.14 E-value=0.076 Score=53.26 Aligned_cols=87 Identities=16% Similarity=0.121 Sum_probs=43.0
Q ss_pred ceEEEEecCCCccccCCccccCCCCCcEEECcCCCCCCCCC-CccCCCCCcEEEecCccccCcCC-CccCCCCccccccc
Q 008707 40 RITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLP-DMSRLIDLRIVHLENNELTGSLP-SYMGSLPNLQELHI 117 (557)
Q Consensus 40 ~l~~L~L~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~-~~~~l~~L~~L~l~~N~l~~~~p-~~~~~l~~L~~l~l 117 (557)
.|+.+.+..+ ++..-...|.++.+|+.+.+..+ +..+.. .|.++.+|+.+.+.+|.++ .++ ..|.+|.+|+.+.+
T Consensus 241 ~L~~i~lp~~-v~~I~~~aF~~~~~l~~i~l~~~-i~~i~~~aF~~c~~L~~i~l~~~~i~-~I~~~aF~~c~~L~~i~l 317 (379)
T 4h09_A 241 ALDEIAIPKN-VTSIGSFLLQNCTALKTLNFYAK-VKTVPYLLCSGCSNLTKVVMDNSAIE-TLEPRVFMDCVKLSSVTL 317 (379)
T ss_dssp SCCEEEECTT-CCEECTTTTTTCTTCCEEEECCC-CSEECTTTTTTCTTCCEEEECCTTCC-EECTTTTTTCTTCCEEEC
T ss_pred cceEEEcCCC-ccEeCccccceeehhcccccccc-ceeccccccccccccccccccccccc-eehhhhhcCCCCCCEEEc
Confidence 4555555543 33222234555555666655433 333333 3555566666666555555 333 34555556665555
Q ss_pred ccccCCCCCCcccc
Q 008707 118 ENNSFVGEIPPALL 131 (557)
Q Consensus 118 ~~N~~~~~~p~~~~ 131 (557)
..| ++ .|....|
T Consensus 318 p~~-l~-~I~~~aF 329 (379)
T 4h09_A 318 PTA-LK-TIQVYAF 329 (379)
T ss_dssp CTT-CC-EECTTTT
T ss_pred Ccc-cc-EEHHHHh
Confidence 433 43 4544443
No 440
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=93.81 E-value=0.14 Score=51.70 Aligned_cols=96 Identities=13% Similarity=0.226 Sum_probs=55.2
Q ss_pred eEEEEecCCCccccCCccccCCCCCcEEECcCCCCCCCCC-CccCCCCCcEEEecCccccCcCC-CccCCCCcccccccc
Q 008707 41 ITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLP-DMSRLIDLRIVHLENNELTGSLP-SYMGSLPNLQELHIE 118 (557)
Q Consensus 41 l~~L~L~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~-~~~~l~~L~~L~l~~N~l~~~~p-~~~~~l~~L~~l~l~ 118 (557)
|+.+.+.++-.+ .-...|.++++|+.+.+. +.++.+.. .|.++.+|+.++|..| ++ .+. ..|.+|.+|+.+.+.
T Consensus 267 L~~i~lp~~~~~-I~~~aF~~c~~L~~i~l~-~~i~~I~~~aF~~c~~L~~i~lp~~-v~-~I~~~aF~~C~~L~~i~ip 342 (394)
T 4gt6_A 267 LASVKMPDSVVS-IGTGAFMNCPALQDIEFS-SRITELPESVFAGCISLKSIDIPEG-IT-QILDDAFAGCEQLERIAIP 342 (394)
T ss_dssp CCEEECCTTCCE-ECTTTTTTCTTCCEEECC-TTCCEECTTTTTTCTTCCEEECCTT-CC-EECTTTTTTCTTCCEEEEC
T ss_pred ccEEecccccce-ecCcccccccccccccCC-CcccccCceeecCCCCcCEEEeCCc-cc-EehHhHhhCCCCCCEEEEC
Confidence 444555443332 333456666777777775 44554544 4777777777777654 55 443 456677777777775
Q ss_pred cccCCCCCCccccc---CceeeeecCC
Q 008707 119 NNSFVGEIPPALLT---GKVIFKYDNN 142 (557)
Q Consensus 119 ~N~~~~~~p~~~~~---~~~~~~~~~n 142 (557)
.+ ++ .|....|. .+..+.+.+|
T Consensus 343 ~s-v~-~I~~~aF~~C~~L~~i~~~~~ 367 (394)
T 4gt6_A 343 SS-VT-KIPESAFSNCTALNNIEYSGS 367 (394)
T ss_dssp TT-CC-BCCGGGGTTCTTCCEEEESSC
T ss_pred cc-cC-EEhHhHhhCCCCCCEEEECCc
Confidence 43 55 66666554 2344455444
No 441
>3g15_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics CONS SGC, hemicholinium-3, transferase; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=93.66 E-value=0.2 Score=50.71 Aligned_cols=30 Identities=30% Similarity=0.383 Sum_probs=24.9
Q ss_pred CeEeeccCCCCEEe------CCCCcEEEecccCccc
Q 008707 357 GIIHRDVKSSNILL------DINMRAKVSDFGLSRQ 386 (557)
Q Consensus 357 ~ivH~dlk~~NIll------~~~~~~kl~Dfgla~~ 386 (557)
.++|+|+.+.||++ +++..+.++||..|..
T Consensus 245 vfcHnDl~~gNil~~~~~~~~~~~~l~vIDwEya~~ 280 (401)
T 3g15_A 245 VFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSSY 280 (401)
T ss_dssp EEECSCCCGGGEEEETTGGGCSSCCEEECCCTTCEE
T ss_pred eeEEecCCCCeEEEecCcccCcCCeEEEechHhccC
Confidence 46799999999999 4567799999987753
No 442
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=93.60 E-value=0.073 Score=53.82 Aligned_cols=70 Identities=11% Similarity=0.074 Sum_probs=41.2
Q ss_pred cccCCCCCcEEECcCCCCCCCCC-CccCCCCCcEEEecCccccCcCC-CccCCCCcccccccccccCCCCCCccccc
Q 008707 58 ELKNMEALTELWLDGNFLTGPLP-DMSRLIDLRIVHLENNELTGSLP-SYMGSLPNLQELHIENNSFVGEIPPALLT 132 (557)
Q Consensus 58 ~~~~l~~L~~L~l~~N~l~~~~~-~~~~l~~L~~L~l~~N~l~~~~p-~~~~~l~~L~~l~l~~N~~~~~~p~~~~~ 132 (557)
.+.++.+|+.+.+.+| ++.+.. .|.++.+|+.++|.++ ++ .++ ..|.+|++|+.+.+..| ++ .|++..|.
T Consensus 292 ~F~~~~~L~~i~l~~~-i~~I~~~aF~~c~~L~~i~lp~~-v~-~I~~~aF~~c~~L~~i~lp~~-l~-~I~~~aF~ 363 (394)
T 4fs7_A 292 TFYGCSSLTEVKLLDS-VKFIGEEAFESCTSLVSIDLPYL-VE-EIGKRSFRGCTSLSNINFPLS-LR-KIGANAFQ 363 (394)
T ss_dssp TTTTCTTCCEEEECTT-CCEECTTTTTTCTTCCEECCCTT-CC-EECTTTTTTCTTCCEECCCTT-CC-EECTTTBT
T ss_pred cccccccccccccccc-cceechhhhcCCCCCCEEEeCCc-cc-EEhHHhccCCCCCCEEEECcc-cc-EehHHHhh
Confidence 3556666777766554 444444 4666677777777543 55 443 35666677777666655 54 56655554
No 443
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=92.69 E-value=0.18 Score=50.53 Aligned_cols=88 Identities=16% Similarity=0.269 Sum_probs=51.8
Q ss_pred ceEEEEecCCCccccCCccccCCCCCcEEECcCCCCCCCCC-CccCCCCCcEEEecCccccCcCCC-ccCCCCccccccc
Q 008707 40 RITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLP-DMSRLIDLRIVHLENNELTGSLPS-YMGSLPNLQELHI 117 (557)
Q Consensus 40 ~l~~L~L~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~-~~~~l~~L~~L~l~~N~l~~~~p~-~~~~l~~L~~l~l 117 (557)
.++.+.+..+ +...-...+.++..|+.+.+..+ ++.+.. .|.++.+|+.+.+..+ ++ .++. .|.++++|+.+.+
T Consensus 218 ~l~~i~~~~~-~~~i~~~~f~~~~~L~~i~lp~~-v~~I~~~aF~~~~~l~~i~l~~~-i~-~i~~~aF~~c~~L~~i~l 293 (379)
T 4h09_A 218 NLKKITITSG-VTTLGDGAFYGMKALDEIAIPKN-VTSIGSFLLQNCTALKTLNFYAK-VK-TVPYLLCSGCSNLTKVVM 293 (379)
T ss_dssp SCSEEECCTT-CCEECTTTTTTCSSCCEEEECTT-CCEECTTTTTTCTTCCEEEECCC-CS-EECTTTTTTCTTCCEEEE
T ss_pred ccceeeeccc-eeEEccccccCCccceEEEcCCC-ccEeCccccceeehhcccccccc-ce-eccccccccccccccccc
Confidence 3555555433 33233345666677777777655 444444 4666777777777544 44 3433 4566777777777
Q ss_pred ccccCCCCCCccccc
Q 008707 118 ENNSFVGEIPPALLT 132 (557)
Q Consensus 118 ~~N~~~~~~p~~~~~ 132 (557)
.+|.+. .|++..|.
T Consensus 294 ~~~~i~-~I~~~aF~ 307 (379)
T 4h09_A 294 DNSAIE-TLEPRVFM 307 (379)
T ss_dssp CCTTCC-EECTTTTT
T ss_pred cccccc-eehhhhhc
Confidence 777666 66666554
No 444
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=92.58 E-value=0.17 Score=51.08 Aligned_cols=80 Identities=14% Similarity=0.213 Sum_probs=63.0
Q ss_pred CceEEEEecCCCccccCCccccCCCCCcEEECcCCCCCCCCC-CccCCCCCcEEEecCccccCcCC-CccCCCCcccccc
Q 008707 39 PRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLP-DMSRLIDLRIVHLENNELTGSLP-SYMGSLPNLQELH 116 (557)
Q Consensus 39 ~~l~~L~L~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~-~~~~l~~L~~L~l~~N~l~~~~p-~~~~~l~~L~~l~ 116 (557)
..|+.+.+. +.++..-...|.++++|+.++|..| ++.+.. .|.++.+|+.+.|..+ ++ .+. ..|.+|++|+.++
T Consensus 288 ~~L~~i~l~-~~i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~C~~L~~i~ip~s-v~-~I~~~aF~~C~~L~~i~ 363 (394)
T 4gt6_A 288 PALQDIEFS-SRITELPESVFAGCISLKSIDIPEG-ITQILDDAFAGCEQLERIAIPSS-VT-KIPESAFSNCTALNNIE 363 (394)
T ss_dssp TTCCEEECC-TTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEEECTT-CC-BCCGGGGTTCTTCCEEE
T ss_pred cccccccCC-CcccccCceeecCCCCcCEEEeCCc-ccEehHhHhhCCCCCCEEEECcc-cC-EEhHhHhhCCCCCCEEE
Confidence 467888885 5676333457899999999999875 665555 5999999999999765 77 565 4688999999999
Q ss_pred cccccC
Q 008707 117 IENNSF 122 (557)
Q Consensus 117 l~~N~~ 122 (557)
+.+|..
T Consensus 364 ~~~~~~ 369 (394)
T 4gt6_A 364 YSGSRS 369 (394)
T ss_dssp ESSCHH
T ss_pred ECCcee
Confidence 988764
No 445
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=91.59 E-value=0.039 Score=48.80 Aligned_cols=93 Identities=10% Similarity=0.105 Sum_probs=58.1
Q ss_pred cCCccccCCCCCcEEECcCCCCCCC-CCCccCCCCCcEEEecCcc-ccCcCCCccCCC----Cccccccccccc-CCCC-
Q 008707 54 EIPPELKNMEALTELWLDGNFLTGP-LPDMSRLIDLRIVHLENNE-LTGSLPSYMGSL----PNLQELHIENNS-FVGE- 125 (557)
Q Consensus 54 ~~p~~~~~l~~L~~L~l~~N~l~~~-~~~~~~l~~L~~L~l~~N~-l~~~~p~~~~~l----~~L~~l~l~~N~-~~~~- 125 (557)
.+|.....--+|+.|||+++.|+.. +..+.++++|+.|+|++|. |+..-=..+..+ ++|+.|+++++. ++..
T Consensus 52 ~LP~~~~~~~~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C~~ITD~G 131 (176)
T 3e4g_A 52 HLPTGPLDKYKIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISCGNVTDKG 131 (176)
T ss_dssp GSCCCSTTCCCEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESCTTCCHHH
T ss_pred cCCcccCCCceEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCCCcCCHHH
Confidence 3454332234799999999998764 3357889999999999996 663222234443 479999999975 5511
Q ss_pred CC-cccccCceeeeecCCCccc
Q 008707 126 IP-PALLTGKVIFKYDNNPKLH 146 (557)
Q Consensus 126 ~p-~~~~~~~~~~~~~~n~~~~ 146 (557)
+. -.-+..+..+.+.+.+...
T Consensus 132 l~~L~~~~~L~~L~L~~c~~It 153 (176)
T 3e4g_A 132 IIALHHFRNLKYLFLSDLPGVK 153 (176)
T ss_dssp HHHGGGCTTCCEEEEESCTTCC
T ss_pred HHHHhcCCCCCEEECCCCCCCC
Confidence 00 0112345566666655443
No 446
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=90.60 E-value=0.2 Score=50.57 Aligned_cols=78 Identities=12% Similarity=0.086 Sum_probs=62.7
Q ss_pred CceEEEEecCCCccccCCccccCCCCCcEEECcCCCCCCCCC-CccCCCCCcEEEecCccccCcCC-CccCCCCcccccc
Q 008707 39 PRITKIALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLP-DMSRLIDLRIVHLENNELTGSLP-SYMGSLPNLQELH 116 (557)
Q Consensus 39 ~~l~~L~L~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~~-~~~~l~~L~~L~l~~N~l~~~~p-~~~~~l~~L~~l~ 116 (557)
.+|+.+.+.++ ++..-...|.++++|+.++|.++ ++.+.. .|.++.+|+.++|+.| ++ .++ ..|.+|++|+.+.
T Consensus 297 ~~L~~i~l~~~-i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~c~~L~~i~lp~~-l~-~I~~~aF~~C~~L~~i~ 372 (394)
T 4fs7_A 297 SSLTEVKLLDS-VKFIGEEAFESCTSLVSIDLPYL-VEEIGKRSFRGCTSLSNINFPLS-LR-KIGANAFQGCINLKKVE 372 (394)
T ss_dssp TTCCEEEECTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTTTTCTTCCEECCCTT-CC-EECTTTBTTCTTCCEEE
T ss_pred ccccccccccc-cceechhhhcCCCCCCEEEeCCc-ccEEhHHhccCCCCCCEEEECcc-cc-EehHHHhhCCCCCCEEE
Confidence 57889999765 66334457999999999999865 776666 5999999999999887 77 554 5788999999999
Q ss_pred cccc
Q 008707 117 IENN 120 (557)
Q Consensus 117 l~~N 120 (557)
+..|
T Consensus 373 lp~~ 376 (394)
T 4fs7_A 373 LPKR 376 (394)
T ss_dssp EEGG
T ss_pred ECCC
Confidence 8765
No 447
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=88.32 E-value=0.085 Score=47.55 Aligned_cols=69 Identities=19% Similarity=0.235 Sum_probs=51.0
Q ss_pred CCccccCCCCCcEEECcCC-CCCCC----CC-CccCCCCCcEEEecCccccCc----CCCccCCCCcccccccccccCC
Q 008707 55 IPPELKNMEALTELWLDGN-FLTGP----LP-DMSRLIDLRIVHLENNELTGS----LPSYMGSLPNLQELHIENNSFV 123 (557)
Q Consensus 55 ~p~~~~~l~~L~~L~l~~N-~l~~~----~~-~~~~l~~L~~L~l~~N~l~~~----~p~~~~~l~~L~~l~l~~N~~~ 123 (557)
+...+.+-+.|+.|+|++| +|... +- .+..-+.|+.|+|++|+|... +...+..-+.|+.|+|++|+|.
T Consensus 33 l~~ll~~n~~L~~L~L~~nn~igd~ga~~la~aL~~N~~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig 111 (197)
T 1pgv_A 33 INRLREDDTDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLT 111 (197)
T ss_dssp HHHHHTTCSSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCC
T ss_pred HHHHHhcCCCccEEECCCCCCCCHHHHHHHHHHHhhCCCcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCC
Confidence 3334556689999999996 77642 11 356667899999999999732 3344455678999999999997
No 448
>4ann_A ESSB; membrane protein, membrane secretion, ESS type VII secretion virulence; 1.05A {Staphylococcus aureus subsp}
Probab=84.95 E-value=2.2 Score=38.69 Aligned_cols=116 Identities=11% Similarity=0.074 Sum_probs=77.1
Q ss_pred CCCCccceeeEEEecCeeEEEEEecCCCChhhhhhccCCCCCcCHHHHHHHHHHHHHHHHHHHcCCCCCeEeeccCCCCE
Q 008707 289 HHRNLVPLIGYCEEEHQRILVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNI 368 (557)
Q Consensus 289 ~h~nIv~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ivH~dlk~~NI 368 (557)
.||+++.. .+-.+++...+.++.-. +...+-. -...+...+++++.+|+....++++ -+|--|+|+|+
T Consensus 43 ~~~~Fl~~-~I~e~eD~v~~~y~~~~--~~~~f~~----ik~~~~~eKlr~l~ni~~l~~~~~~-----r~tf~L~P~NL 110 (215)
T 4ann_A 43 HSPYFIDA-ELTELRDSFQIHYDIND--NHTPFDN----IKSFTKNEKLRYLLNIKNLEEVNRT-----RYTFVLAPDEL 110 (215)
T ss_dssp CCTTBCCE-EEEECSSEEEEEECCCT--TSEEGGG----GGGSCHHHHHHHHHHGGGGGGGGGS-----SEECCCSGGGE
T ss_pred cCCcccce-EEEEcccEEEEEEEcCc--ccCCHHH----HHhcCHHHHHHHHHHHHHHHHHhcC-----ceEEEEecceE
Confidence 58888866 45555565555555433 2222221 2346788899999999998866653 47889999999
Q ss_pred EeCCCCcEEEecccCccccCCCCccccccccCCCCccCCcccCCCCCCcccceehhHHHHHHHHhCCCCCC
Q 008707 369 LLDINMRAKVSDFGLSRQAEEDLTHISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVS 439 (557)
Q Consensus 369 ll~~~~~~kl~Dfgla~~~~~~~~~~~~~~~g~~~y~aPE~l~~~~~s~~~DvwslG~ll~elltg~~pf~ 439 (557)
+++.++.+++.=.|+-... +|. ..+...=.-.+=+++..+++++..|.
T Consensus 111 ~f~~~~~p~i~~RGik~~l------------------~P~-----~~~ee~fL~qyKAliiall~~K~~Fe 158 (215)
T 4ann_A 111 FFTRDGLPIAKTRGLQNVV------------------DPL-----PVSEAEFLTRYKALVICAFNEKQSFD 158 (215)
T ss_dssp EECTTSCEEESCCEETTTB------------------SCC-----CCCHHHHHHHHHHHHHHHHCTTCCHH
T ss_pred EEcCCCCEEEEEccCccCC------------------CCC-----CCCHHHHHHHHHHHHHHHHcCCCCHH
Confidence 9999999999876653222 111 11222223456678899999999886
No 449
>3cxl_A N-chimerin; SH2, RHO-GAP, structural genomics consortium, SGC, gtpas activation, metal-binding, phorbol-ester binding, SH2 domai finger; 2.60A {Homo sapiens} PDB: 1xa6_A
Probab=82.22 E-value=0.21 Score=51.68 Aligned_cols=60 Identities=8% Similarity=0.087 Sum_probs=17.9
Q ss_pred hcccCCCCceEEEEEEEcC-CcEEEE------EEccCcc--chhHHHHHHHHHHHhhcCCCCccceeeEEEe
Q 008707 240 CKKIGKGSFGSVYYGKMKD-GKEVAV------KIMADSC--SHRTQQFVTEVALLSRIHHRNLVPLIGYCEE 302 (557)
Q Consensus 240 ~~~lG~G~~g~Vy~~~~~~-~~~vav------K~~~~~~--~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~ 302 (557)
.+.|| ||.||+|.+.. ..+||+ |..+... .+....+.+|..+++.++|||+++.+++...
T Consensus 147 ~~~lG---fG~v~~g~~~~~~~~Vav~~~~~~K~~~~~~~~~e~~~~~~rea~l~~~~~H~niv~~h~f~~~ 215 (463)
T 3cxl_A 147 YEHVG---YTTLNREPAYKKHMPVLKETHDERDSTGQDGVSEKRLTSLVRRATLKENEQIPKYEKIHNFKVH 215 (463)
T ss_dssp TTTSS---BCCC---------CCBGGGC-----------------------------------CBCCCEEEE
T ss_pred cccCC---chhhhcccccccCCchhhhhccCccccccccccccccccccccccccccccccccCCCcceEEe
Confidence 46677 99999998864 357888 6654321 2233568889999999999999999987643
No 450
>2jwa_A Receptor tyrosine-protein kinase ERBB-2; transmembrane helix dimer, protein kinase receptor membrane domain, ATP-binding, glycoprotein; NMR {Homo sapiens} PDB: 2ks1_A
Probab=79.31 E-value=0.68 Score=30.10 Aligned_cols=10 Identities=30% Similarity=0.717 Sum_probs=4.9
Q ss_pred EEEeehhhHH
Q 008707 157 LILGTSIGVL 166 (557)
Q Consensus 157 ~~i~~~i~~~ 166 (557)
.+.+.++|++
T Consensus 13 ~Ia~~vVGvl 22 (44)
T 2jwa_A 13 SIISAVVGIL 22 (44)
T ss_dssp HHHHHHHHHH
T ss_pred chHHHHHHHH
Confidence 3455555533
No 451
>4ano_A ESSB; membrane protein, membrane secretion, ESS type V secretion S; HET: MSE; 1.70A {Geobacillus thermodenitrificans ng80-2organism_taxid}
Probab=77.61 E-value=5.2 Score=36.35 Aligned_cols=115 Identities=11% Similarity=0.097 Sum_probs=75.1
Q ss_pred CCCCccceeeEEEecCeeEEEEEecCCCChhhhhhccCCCCCcCHHHHHHHHHHHHHHHH-HHHcCCCCCeEeeccCCCC
Q 008707 289 HHRNLVPLIGYCEEEHQRILVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLE-YLHTGCNPGIIHRDVKSSN 367 (557)
Q Consensus 289 ~h~nIv~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~-~LH~~~~~~ivH~dlk~~N 367 (557)
.||++ --.+-.+++...+.++.-+++.=...++ ..+...+++++.+|+.... +++ .-+|--|.|+|
T Consensus 48 ~~~~f--~~~I~~~eD~~~i~y~~~~~~~~f~~i~------~~~~~eKlrll~nl~~L~~~~~~-----~r~tf~l~P~N 114 (219)
T 4ano_A 48 VDPCI--VRDIDVSEDEVKVVIKPPSSFLTFAAIR------KTTLLSRIRAAIHLVSKVKHHSA-----RRLIFIVCPEN 114 (219)
T ss_dssp SCSSS--EEEEEECSSEEEEEEECCTTCEEHHHHH------TSCHHHHHHHHHHHHHHHSSCCS-----SSEECCCCGGG
T ss_pred cCCCC--CeEEEEeCCEEEEEEEcCcccCcHHHHH------hcCHHHHHHHHHHHHHHHHHhhh-----CceeEEEeCce
Confidence 57887 3444456666666666543332222332 3677888999999988777 554 45788999999
Q ss_pred EEeCCCCcEEEecccCccccCCCCccccccccCCCCccCCcccCCCCCCcccceehhHHHHHHHHhCCCCCC
Q 008707 368 ILLDINMRAKVSDFGLSRQAEEDLTHISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVS 439 (557)
Q Consensus 368 Ill~~~~~~kl~Dfgla~~~~~~~~~~~~~~~g~~~y~aPE~l~~~~~s~~~DvwslG~ll~elltg~~pf~ 439 (557)
++++.++.+++.=.|+-.. ++|..+ +...=.-.+=+++..++.++..|.
T Consensus 115 L~f~~~~~p~i~hRGi~~~------------------lpP~e~-----~ee~fl~qyKali~all~~K~~Fe 163 (219)
T 4ano_A 115 LMFNRALEPFFLHVGVKES------------------LPPDEW-----DDERLLREVKATVLALTEGEYRFD 163 (219)
T ss_dssp EEECTTCCEEESCCEETTT------------------BSSCSC-----CHHHHHHHHHHHHHHHTTCSSCHH
T ss_pred EEEeCCCcEEEEEcCCccc------------------CCCCCC-----CHHHHHHHHHHHHHHHHcCCCCHH
Confidence 9999999999987765322 222221 111223356678888888888875
No 452
>2l2t_A Receptor tyrosine-protein kinase ERBB-4; transmembrane dimer, membrane domain, membrane protei; NMR {Homo sapiens}
Probab=74.33 E-value=1.2 Score=29.00 Aligned_cols=7 Identities=14% Similarity=0.192 Sum_probs=2.6
Q ss_pred HHHHHhh
Q 008707 175 CSLIVLR 181 (557)
Q Consensus 175 ~~~~~~~ 181 (557)
+.++++|
T Consensus 29 ~~~~~~R 35 (44)
T 2l2t_A 29 TFAVYVR 35 (44)
T ss_dssp HHHHHHH
T ss_pred HHHHHhh
Confidence 3333333
No 453
>2dcv_A Tachystatin-B1; antimicrobial, cystine-knot, antimicrobial protein; NMR {Tachypleus tridentatus} PDB: 2dcw_A
Probab=53.28 E-value=6.6 Score=24.79 Aligned_cols=19 Identities=21% Similarity=0.324 Sum_probs=14.6
Q ss_pred CCCCCCCCCCCCCCeEEeeCCCC
Q 008707 16 TNDRGDPCVPVPWEWVTCSTTTP 38 (557)
Q Consensus 16 ~~~~~~~c~~~~~~~v~c~~~~p 38 (557)
.+|+|++|+ .|..|+-..|
T Consensus 12 adWsgp~CC----~GyyCsr~fP 30 (42)
T 2dcv_A 12 RVYSGRSCC----FGYYCRRDFP 30 (42)
T ss_dssp ETTCSSCBS----TTEEEEESST
T ss_pred ecccCCCcc----CCcEEcCCCC
Confidence 589999885 7999994333
No 454
>2jwa_A Receptor tyrosine-protein kinase ERBB-2; transmembrane helix dimer, protein kinase receptor membrane domain, ATP-binding, glycoprotein; NMR {Homo sapiens} PDB: 2ks1_A
Probab=46.25 E-value=20 Score=23.22 Aligned_cols=9 Identities=33% Similarity=0.372 Sum_probs=3.7
Q ss_pred ehhhHHHHH
Q 008707 161 TSIGVLAIL 169 (557)
Q Consensus 161 ~~i~~~~~l 169 (557)
++.+++.++
T Consensus 14 Ia~~vVGvl 22 (44)
T 2jwa_A 14 IISAVVGIL 22 (44)
T ss_dssp HHHHHHHHH
T ss_pred hHHHHHHHH
Confidence 334444433
No 455
>1eit_A MU-agatoxin-I, MU-AGA-I; neurotoxin, excitatory insect toxin; NMR {Agelenopsis aperta} SCOP: g.3.6.2
Probab=44.40 E-value=7 Score=23.90 Aligned_cols=20 Identities=30% Similarity=0.552 Sum_probs=14.4
Q ss_pred CCCCCCCCCCCCCCCeEEeeCCCCC
Q 008707 15 RTNDRGDPCVPVPWEWVTCSTTTPP 39 (557)
Q Consensus 15 ~~~~~~~~c~~~~~~~v~c~~~~p~ 39 (557)
-.+|.|+ |+ .|..|+|..+|
T Consensus 9 CadW~gp-CC----~gyyCsCr~~p 28 (37)
T 1eit_A 9 CRDWYDE-CC----EGFYCSCRQPP 28 (37)
T ss_dssp CCSSSSC-BC----TTEEEEEEETT
T ss_pred ecccccC-cc----CceeEccCCCC
Confidence 3689997 64 78888885443
No 456
>2ks1_B Epidermal growth factor receptor; ERBB1, ERBB2, transmembrane, heterodimer, complex, tyrosine receptor, bicelles, transferase; NMR {Homo sapiens}
Probab=43.21 E-value=25 Score=22.75 Aligned_cols=27 Identities=26% Similarity=0.417 Sum_probs=14.3
Q ss_pred ehhhHHHHHHHHHHHHHHHhhhhhhcc
Q 008707 161 TSIGVLAILLVLFLCSLIVLRKLRRKI 187 (557)
Q Consensus 161 ~~i~~~~~l~~~~~~~~~~~~~~~~~~ 187 (557)
++.+++..++++.++........|++.
T Consensus 13 IA~gVVgGv~~~~ii~~~~~~~~RRr~ 39 (44)
T 2ks1_B 13 IATGMVGALLLLLVVALGIGLFMRRRH 39 (44)
T ss_dssp STHHHHHHHHHHHHHHHHHHHHHHTTT
T ss_pred EEeehhHHHHHHHHHHHHHHHHhhhhH
Confidence 444444444554555556666666654
No 457
>2k1k_A Ephrin type-A receptor 1; EPHA1, receptor tyrosine kinase, dimeric transmembrane domain, ATP-binding, glycoprotein, nucleotide-binding; NMR {Homo sapiens} PDB: 2k1l_A
Probab=41.99 E-value=7.9 Score=24.28 Aligned_cols=16 Identities=25% Similarity=0.368 Sum_probs=7.3
Q ss_pred EEeehhhHHHHHHHHH
Q 008707 158 ILGTSIGVLAILLVLF 173 (557)
Q Consensus 158 ~i~~~i~~~~~l~~~~ 173 (557)
+.+++++.++.+.++.
T Consensus 13 IAGiVvG~v~gv~li~ 28 (38)
T 2k1k_A 13 IVAVIFGLLLGAALLL 28 (38)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred eeeeehHHHHHHHHHH
Confidence 3455555544444333
No 458
>3ls8_A Phosphatidylinositol 3-kinase catalytic subunit type 3; alpha/beta protein, PIK3C3, compound 15E, structural genomics, SGC stockholm; HET: AJZ; 2.25A {Homo sapiens} PDB: 3ihy_A
Probab=38.44 E-value=3.7e+02 Score=28.21 Aligned_cols=84 Identities=13% Similarity=0.121 Sum_probs=51.2
Q ss_pred cceeeEEEecCeeEEEEEecCCCChhhhhh----------ccCCCC----CcCHHHHHHHHHHHHH--HHHHHHcCCCCC
Q 008707 294 VPLIGYCEEEHQRILVYEYMHNGTLRDRLH----------GSVNQK----PLDWLTRLQIAHDAAK--GLEYLHTGCNPG 357 (557)
Q Consensus 294 v~~~~~~~~~~~~~lv~e~~~~gsL~~~l~----------~~~~~~----~l~~~~~~~i~~qia~--aL~~LH~~~~~~ 357 (557)
+..|.+........+ .|++++.++.+.+. ...... ...+..+..++..+|- .+.|+= |
T Consensus 402 i~~Y~Vipls~~~Gl-IE~V~~~tl~~il~~~~~l~~~f~~~~~~~~~~~~~~~~a~~nF~~S~A~ySvv~YIL-----G 475 (614)
T 3ls8_A 402 LTPYKVLATSTKHGF-MQFIQSVPVAEVLDTEGSIQNFFRKYAPSENGPNGISAEVMDTYVKSCAGYCVITYIL-----G 475 (614)
T ss_dssp CCCCCEEESSSSEEE-EECCCCEEHHHHHHHTSSHHHHHHHHSBCTTSGGGBCHHHHHHHHHHHHHHHHHHHHH-----T
T ss_pred eeccEEEEecCCCce-EEEeCCccHHHHHHccChHHHHHHHhCCCccccccccHHHHHHHHHHHHHHhHhheee-----e
Confidence 455666665555553 57777655554443 211111 1234455556655543 455553 3
Q ss_pred eEeeccCCCCEEeCCCCcEEEecccCcc
Q 008707 358 IIHRDVKSSNILLDINMRAKVSDFGLSR 385 (557)
Q Consensus 358 ivH~dlk~~NIll~~~~~~kl~Dfgla~ 385 (557)
-||=.++||||+.+|++.=+|||.+.
T Consensus 476 --igDRH~~NILld~tG~v~HIDFG~~f 501 (614)
T 3ls8_A 476 --VGDRHLDNLLLTKTGKLFHIDFGYIL 501 (614)
T ss_dssp --CCCCCTTSEEECTTSCEEECCCSSCT
T ss_pred --ccCCCCcceeEcCCCCEeeeehHHhh
Confidence 25778999999999999999999874
No 459
>2l2t_A Receptor tyrosine-protein kinase ERBB-4; transmembrane dimer, membrane domain, membrane protei; NMR {Homo sapiens}
Probab=36.09 E-value=32 Score=22.26 Aligned_cols=28 Identities=29% Similarity=0.405 Sum_probs=15.4
Q ss_pred ehhhHHHHHHHHHHHHHHHhhhhhhccc
Q 008707 161 TSIGVLAILLVLFLCSLIVLRKLRRKIS 188 (557)
Q Consensus 161 ~~i~~~~~l~~~~~~~~~~~~~~~~~~~ 188 (557)
++.+++..+++++++........|++..
T Consensus 12 IA~gVVgGv~~v~ii~~~~~~~~RRRr~ 39 (44)
T 2l2t_A 12 IAAGVIGGLFILVIVGLTFAVYVRRKSI 39 (44)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTCS
T ss_pred EEEeehHHHHHHHHHHHHHHHHhhhhhh
Confidence 3444444455555666666666666543
No 460
>1cja_A Protein (actin-fragmin kinase); transferase; HET: AMP; 2.90A {Physarum polycephalum} SCOP: d.144.1.3
Probab=33.55 E-value=2.1e+02 Score=27.51 Aligned_cols=138 Identities=14% Similarity=0.130 Sum_probs=68.1
Q ss_pred hcccCCCCceEEEEEEEcCCcEEEEEEccCccchhHHHHHHHHHHHhhcCCCCccceeeE-----------------E--
Q 008707 240 CKKIGKGSFGSVYYGKMKDGKEVAVKIMADSCSHRTQQFVTEVALLSRIHHRNLVPLIGY-----------------C-- 300 (557)
Q Consensus 240 ~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~-----------------~-- 300 (557)
.+..-.|.. -||.+.. ++..|+||-.. .-..+.+..++...-.+.-|+..-+... .
T Consensus 74 I~~s~~Gst-gvff~~t-d~~~~VVK~s~---~l~~E~l~s~LA~~LGlpiP~~Riv~~~~~E~~e~~~~L~~~~~~~~~ 148 (342)
T 1cja_A 74 IERSEKGTE-GLFFVET-ESGVFIVKRST---NIESETFCSLLCMRLGLHAPKVRVVSSNSEEGTNMLECLAAIDKSFRV 148 (342)
T ss_dssp EEECCSTTS-CEEEEEE-SSCEEEEECCT---THHHHHHHHHHHHHHTCCCCCEEEEESSSHHHHHHHHHHHHHCSSSCH
T ss_pred EEeccCCCC-CeEEEEe-CCCEEEEeCcH---HHHHHHHHHHHHHHhCCCCCCeeEEeeCcHHHHHHHHHHHHhhhhhHH
Confidence 344555654 4555544 47889999442 2223334444444444455542211100 0
Q ss_pred ---EecCeeEEEEEecCCCChhhhhhccCCCCCcCHHHHHHHHHHH--HHHHHHHHcCCCCC-eE-eeccCCCCEEeCCC
Q 008707 301 ---EEEHQRILVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDA--AKGLEYLHTGCNPG-II-HRDVKSSNILLDIN 373 (557)
Q Consensus 301 ---~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qi--a~aL~~LH~~~~~~-iv-H~dlk~~NIll~~~ 373 (557)
...+..+++|+|++|..|...-... ....+.. +.+.++ +-++..+....++- .. +.--++.|||++++
T Consensus 149 l~~l~~~~~~l~meyv~G~~L~e~~~~~-~~~~f~~----~~~k~LG~Ii~FDi~InN~DR~Pl~W~n~GN~~NIL~~~~ 223 (342)
T 1cja_A 149 ITTLANQANILLMELVRGITLNKLTTTS-APEVLTK----STMQQLGSLMALDVIVNNSDRLPIAWTNEGNLDNIMLSER 223 (342)
T ss_dssp HHHHTTCSEEEEEECCCEEESTTCCSSS-HHHHSCH----HHHHHHHHHHHHHHHHTCCSSSCSSSCSCCCGGGEEEESB
T ss_pred HHHhhcccceehhhhcCCCccccchhhh-hhhhcCH----HHHHhhchhheehhhhcCCccCcccccCCCChhheEEeCC
Confidence 0123466999999876654432110 0011222 223333 23455555432222 11 12357899999875
Q ss_pred Cc-EEEecccCcccc
Q 008707 374 MR-AKVSDFGLSRQA 387 (557)
Q Consensus 374 ~~-~kl~Dfgla~~~ 387 (557)
+. +.++|-+.+...
T Consensus 224 n~~~~~IDhn~af~~ 238 (342)
T 1cja_A 224 GATVVPIDSKIIPLD 238 (342)
T ss_dssp TTCEEECSCCCCCCC
T ss_pred CCeEEEEcCCccccC
Confidence 55 889999887543
No 461
>1v90_A Delta-paluit1, delta-palutoxin IT1; insecticidal toxin, spider toxin, ICK fold, structure; NMR {Paracoelotes luctuosus} PDB: 1v91_A
Probab=32.63 E-value=17 Score=22.42 Aligned_cols=21 Identities=24% Similarity=0.471 Sum_probs=14.9
Q ss_pred CCCCCCCCCCCCCCCeEEeeCCCCC
Q 008707 15 RTNDRGDPCVPVPWEWVTCSTTTPP 39 (557)
Q Consensus 15 ~~~~~~~~c~~~~~~~v~c~~~~p~ 39 (557)
-.+|.|+-|+ .|..|+|-.+|
T Consensus 9 CadW~gp~CC----~gyyCsCr~~p 29 (38)
T 1v90_A 9 CADWSGPSCC----DGFYCSCRSMP 29 (38)
T ss_dssp CCTTTCSCCC----TTBCCCCSSSS
T ss_pred eccccCCccc----CCceEccCCCC
Confidence 3689997674 67788885443
No 462
>3hhm_A Phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit alpha isoform; PI3KCA, PI3K, PIK3R1, phosphatidilynositol 3,4,5- triphosphate, wortmannin, H1047R, ATP-binding, disease mutation, kinase; HET: KWT; 2.80A {Homo sapiens} PDB: 3hiz_A 2rd0_A 4a55_A* 2enq_A
Probab=28.27 E-value=1.9e+02 Score=32.82 Aligned_cols=26 Identities=27% Similarity=0.242 Sum_probs=23.2
Q ss_pred eccCCCCEEeCCCCcEEEecccCccc
Q 008707 361 RDVKSSNILLDINMRAKVSDFGLSRQ 386 (557)
Q Consensus 361 ~dlk~~NIll~~~~~~kl~Dfgla~~ 386 (557)
||=.++||||+.+|++.-+|||.+..
T Consensus 937 gDRH~~NILid~tG~v~HIDFG~~f~ 962 (1091)
T 3hhm_A 937 GDRHNSNIMVKDDGQLFHIDFGHFLD 962 (1091)
T ss_dssp CCCCTTTEEEETTSCEEECCCCCCSC
T ss_pred cCCCCcceEEeCCCCEEEEeehhhhc
Confidence 57789999999999999999998753
No 463
>2lz0_A Uncharacterized protein; hypothetical leucine rich repeat protein, structural genomic unknown function; NMR {Bacteroides capillosus}
Probab=26.65 E-value=1.6e+02 Score=22.56 Aligned_cols=39 Identities=13% Similarity=0.059 Sum_probs=21.7
Q ss_pred ccccCCCCCcEEECcCCCCCCCCC-CccCCCCCcEEEecCc
Q 008707 57 PELKNMEALTELWLDGNFLTGPLP-DMSRLIDLRIVHLENN 96 (557)
Q Consensus 57 ~~~~~l~~L~~L~l~~N~l~~~~~-~~~~l~~L~~L~l~~N 96 (557)
..|.++++|+.+.+..+ ++.+-. .|.++.+|+.+.+...
T Consensus 14 ~aF~~c~~L~~i~iP~~-v~~Ig~~aF~~C~~L~~i~~~~~ 53 (100)
T 2lz0_A 14 SLFAGNTVIREITVQPN-IGLLYDGMFSGCTALEKLILTGE 53 (100)
T ss_dssp CTTTTCTTCCCEEECTT-SSCCCTTSSTTCTTCCCEEECCS
T ss_pred HHhcCCCCCcEEEcCCc-hheEcHHHHhccCCccEEEEcCC
Confidence 34666666666666554 333333 4666666666666543
No 464
>2lz0_A Uncharacterized protein; hypothetical leucine rich repeat protein, structural genomic unknown function; NMR {Bacteroides capillosus}
Probab=22.67 E-value=1e+02 Score=23.72 Aligned_cols=47 Identities=11% Similarity=0.086 Sum_probs=34.5
Q ss_pred CCCCCCCC-CccCCCCCcEEEecCccccCcCCCccCCCCcccccccccc
Q 008707 73 NFLTGPLP-DMSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELHIENN 120 (557)
Q Consensus 73 N~l~~~~~-~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~l~l~~N 120 (557)
..++.+-. .|.++.+|+.+.|..+ ++..=...|.+|.+|+.+.+...
T Consensus 6 ~~vt~I~~~aF~~c~~L~~i~iP~~-v~~Ig~~aF~~C~~L~~i~~~~~ 53 (100)
T 2lz0_A 6 EPVVGMDKSLFAGNTVIREITVQPN-IGLLYDGMFSGCTALEKLILTGE 53 (100)
T ss_dssp CCCCSSCSCTTTTCTTCCCEEECTT-SSCCCTTSSTTCTTCCCEEECCS
T ss_pred CccCEecHHHhcCCCCCcEEEcCCc-hheEcHHHHhccCCccEEEEcCC
Confidence 34555555 5999999999999986 55233457889999998888654
No 465
>2x6h_A GH13170P, VPS34, phosphotidylinositol 3 kinase 59F; transferase; 2.90A {Drosophila melanogaster} PDB: 2x6f_A 2x6i_A* 2x6j_A* 2x6k_A*
Probab=21.39 E-value=49 Score=35.50 Aligned_cols=84 Identities=18% Similarity=0.136 Sum_probs=48.7
Q ss_pred cceeeEEEecCeeEEEEEecCCCChhhhhhcc----------CCCC----CcCHHHHHHHHHHHHH--HHHHHHcCCCCC
Q 008707 294 VPLIGYCEEEHQRILVYEYMHNGTLRDRLHGS----------VNQK----PLDWLTRLQIAHDAAK--GLEYLHTGCNPG 357 (557)
Q Consensus 294 v~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~----------~~~~----~l~~~~~~~i~~qia~--aL~~LH~~~~~~ 357 (557)
+..|.+........ +.|+++..++.+++... .... ......+..++.++|- .+.|+= |
T Consensus 476 i~~Y~Vipls~~~G-LIE~V~s~tl~~i~~~~~~l~~~f~~~~p~~~~~~~~~~~ar~nF~~SlA~~Svv~YIL-----G 549 (696)
T 2x6h_A 476 LTPYKVLATSSKHG-FLQYVDSCTVAEVLAREGNIHNFFRKHHPCDNGPYGISAEVMDTYIKSCAGYCVITYLL-----G 549 (696)
T ss_dssp CCCCCEEESSTTCE-EEECCCCEEHHHHHHHSSSHHHHHHHHSBCTTSSSSBCHHHHHHHHHHHHHHHHHHHHH-----T
T ss_pred EeccEEEeccCCCC-eeeeCCCccHHHHHHhcChHHHHHHHHCCCccchhhhHHHHHHHHHHHHHHHHHHHHHc-----c
Confidence 34455555544444 34666655565555422 1111 1112334455555442 344543 2
Q ss_pred eEeeccCCCCEEeCCCCcEEEecccCcc
Q 008707 358 IIHRDVKSSNILLDINMRAKVSDFGLSR 385 (557)
Q Consensus 358 ivH~dlk~~NIll~~~~~~kl~Dfgla~ 385 (557)
-||=.++||||+.+|++.-+|||.+.
T Consensus 550 --lGDRH~~NILid~tG~v~HIDFG~~f 575 (696)
T 2x6h_A 550 --VGDRHLDNLLLTTNGKLFHIDFGYIL 575 (696)
T ss_dssp --CCCCCTTTEEECTTSCEEECCCCSCT
T ss_pred --CCCCCCcceEEeCCCCEEEEeehhhh
Confidence 36889999999999999999999875
Done!