BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 008708
(557 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|224054488|ref|XP_002298285.1| predicted protein [Populus trichocarpa]
gi|222845543|gb|EEE83090.1| predicted protein [Populus trichocarpa]
Length = 575
Score = 827 bits (2136), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 417/559 (74%), Positives = 477/559 (85%), Gaps = 6/559 (1%)
Query: 1 MGMLAPRKFMQKRRKVEVFKDAADEAGKKNWRRLMNQIEEVGSAVAVLRSERTRGQPLPK 60
MGML+PRKF+QKRRKVEVFKDA+DEA +KNWRRLM QIE+ GSAV+VLR ER + LP+
Sbjct: 21 MGMLSPRKFLQKRRKVEVFKDASDEADQKNWRRLMKQIEDTGSAVSVLRRERIKKDGLPR 80
Query: 61 DLVLGTLVRLKQLKKWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLS 120
DLVLGTLVR KQLKKW++VSE+LEWL+ Q WWDFNEMDFLMLITAYGK GDFN AE VL
Sbjct: 81 DLVLGTLVRFKQLKKWDLVSEILEWLQSQHWWDFNEMDFLMLITAYGKLGDFNGAEMVLR 140
Query: 121 FMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEAN 180
MN GY P+VVSHTALMEAYGRGGRY NAEAIFRRMQ+SGP PSALTYQIILK FVE N
Sbjct: 141 SMNGNGYVPNVVSHTALMEAYGRGGRYNNAEAIFRRMQTSGPEPSALTYQIILKTFVEGN 200
Query: 181 KFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTV 240
KFKEAEEVF TLL++E SPL+PDQKMFHMMIYM KKAG YEKARK+FALMAERGV QSTV
Sbjct: 201 KFKEAEEVFETLLNKENSPLEPDQKMFHMMIYMQKKAGNYEKARKVFALMAERGVPQSTV 260
Query: 241 TYNSLMSFETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDA 300
TYNSLMSFETNYKEVSKIYDQMQR+GL+PDVVSYALLI AYG+ARREEEALAVFEEMLDA
Sbjct: 261 TYNSLMSFETNYKEVSKIYDQMQRSGLRPDVVSYALLIKAYGRARREEEALAVFEEMLDA 320
Query: 301 GVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGA 360
GVRP+HKAYNILLDAFAISGMV+QAR VFK MRRDRC+PD+CSYTTMLSAYVNASDMEGA
Sbjct: 321 GVRPSHKAYNILLDAFAISGMVEQARVVFKSMRRDRCTPDLCSYTTMLSAYVNASDMEGA 380
Query: 361 EKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDA 420
E FF+RL+QDG PNV+TYG LIKG+AKVNNLEKMMEIY++M++N IK NQTI TTIMDA
Sbjct: 381 ENFFKRLRQDGLKPNVVTYGALIKGHAKVNNLEKMMEIYEEMQLNSIKANQTILTTIMDA 440
Query: 421 YGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNE-- 478
YGKNKDF SAV+WYKEME G PPDQKA+NILLSLAKT DE+ EA++L+G +P++
Sbjct: 441 YGKNKDFGSAVIWYKEMEHHGVPPDQKAQNILLSLAKTQDEQKEASQLVG---YPDDCGI 497
Query: 479 PGINGLSISVDEEDDDDDDDEDDDDNIYHDGDGDGDGDDNEDDAEETIACSGKEDELIFF 538
ING S D++ DD+ D++DD + D + D D +D A +T++ S + ++LIF
Sbjct: 498 QSINGASRFADDDGSDDETDDEDDYDEADKNDDEDDCDGVDDTA-KTVSYSKECEDLIFL 556
Query: 539 NGDHQRSQEGLHTLQTVDL 557
+GD+Q + E LH L +DL
Sbjct: 557 DGDNQHNLEALHALTVIDL 575
>gi|449463623|ref|XP_004149531.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g59040-like [Cucumis sativus]
Length = 580
Score = 824 bits (2128), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 387/470 (82%), Positives = 434/470 (92%)
Query: 1 MGMLAPRKFMQKRRKVEVFKDAADEAGKKNWRRLMNQIEEVGSAVAVLRSERTRGQPLPK 60
MGML PRKF+QKR+K+EVFKD ADEA +KNWRRLMN+IEE GSAV+VLRSER + + +PK
Sbjct: 43 MGMLTPRKFLQKRKKLEVFKDEADEAEQKNWRRLMNEIEETGSAVSVLRSERIKNEAIPK 102
Query: 61 DLVLGTLVRLKQLKKWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLS 120
DLVLGTLVR KQLKKWN+VSE+LEWLR QSWW+F+EMDF+MLITAYGK GDFN+AEKVL+
Sbjct: 103 DLVLGTLVRFKQLKKWNLVSEILEWLRTQSWWNFSEMDFVMLITAYGKLGDFNRAEKVLN 162
Query: 121 FMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEAN 180
MNKKGYAP+VVSHTALMEAYGRG RY NAEAIFRRMQS GP PSALTYQI+LK FVE +
Sbjct: 163 LMNKKGYAPNVVSHTALMEAYGRGRRYNNAEAIFRRMQSGGPEPSALTYQIMLKTFVEGS 222
Query: 181 KFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTV 240
KFKEAEE+F +LL++EK LKPDQKMFHM+IYM+KKAG YEKARK+FA MA RGV Q+TV
Sbjct: 223 KFKEAEELFDSLLNKEKPVLKPDQKMFHMIIYMFKKAGNYEKARKVFAEMAARGVPQTTV 282
Query: 241 TYNSLMSFETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDA 300
TYNSLMSFETNYKEVSKIYDQMQRAGLQPDVVSYALLI+AYGKARREEEALAVFEEMLDA
Sbjct: 283 TYNSLMSFETNYKEVSKIYDQMQRAGLQPDVVSYALLISAYGKARREEEALAVFEEMLDA 342
Query: 301 GVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGA 360
G+RPTHKAYNILLDAFAISGMV+QA+ VFK M+RDRCSPDICSYTTMLSAYVNASDMEGA
Sbjct: 343 GIRPTHKAYNILLDAFAISGMVEQAKIVFKSMKRDRCSPDICSYTTMLSAYVNASDMEGA 402
Query: 361 EKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDA 420
E FFRRLKQDGF PNV+TYGTLIKGYAK+NNLEKM++ Y++M+VNGI+ NQTI TTIMDA
Sbjct: 403 ENFFRRLKQDGFRPNVVTYGTLIKGYAKINNLEKMIKRYEEMKVNGIRVNQTILTTIMDA 462
Query: 421 YGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLG 470
YGKNKDF SAV+W+ E+ESCG PDQKAKNILLSLAKTA+E +EAN+L+G
Sbjct: 463 YGKNKDFGSAVIWFNEIESCGLRPDQKAKNILLSLAKTAEELDEANQLVG 512
>gi|255583688|ref|XP_002532598.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223527686|gb|EEF29795.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 553
Score = 806 bits (2083), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 382/470 (81%), Positives = 425/470 (90%)
Query: 2 GMLAPRKFMQKRRKVEVFKDAADEAGKKNWRRLMNQIEEVGSAVAVLRSERTRGQPLPKD 61
GML+PRKF+Q+R+KVEVFKD ADEA KNWR LM QIEE S V+VL+S+ Q LPK
Sbjct: 46 GMLSPRKFLQRRKKVEVFKDEADEAYHKNWRGLMRQIEETDSPVSVLKSKLINNQSLPKH 105
Query: 62 LVLGTLVRLKQLKKWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSF 121
LVLGTLVR KQLKKW++VS++LEW+R QSWWDFNEMD LMLITAYGKQG+F+ AEKVLS+
Sbjct: 106 LVLGTLVRFKQLKKWHLVSQILEWVRTQSWWDFNEMDSLMLITAYGKQGNFSAAEKVLSY 165
Query: 122 MNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANK 181
MNK GY P+VVSHTALMEAYGRG RY NAEAIFRRMQSSGP+PSA+TYQIILK FVE NK
Sbjct: 166 MNKMGYVPNVVSHTALMEAYGRGARYNNAEAIFRRMQSSGPKPSAVTYQIILKNFVEGNK 225
Query: 182 FKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVT 241
FKEAEEVF TLLDEEKSPLKPDQKMFHMMIYM++KAG YEKAR++FALM +RGV +STVT
Sbjct: 226 FKEAEEVFETLLDEEKSPLKPDQKMFHMMIYMHRKAGNYEKARQIFALMTQRGVPKSTVT 285
Query: 242 YNSLMSFETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAG 301
YNSLMSFETNYKEVSKIYDQMQR+GLQPDV+SYALLINAYGKARRE+EALAVFEEMLDAG
Sbjct: 286 YNSLMSFETNYKEVSKIYDQMQRSGLQPDVISYALLINAYGKARREDEALAVFEEMLDAG 345
Query: 302 VRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAE 361
VRPTHKAYNILLDAFAISGMV+QARTVFK MRRDR +PD+CSYTTMLSAYVNASDM GAE
Sbjct: 346 VRPTHKAYNILLDAFAISGMVEQARTVFKSMRRDRYTPDLCSYTTMLSAYVNASDMAGAE 405
Query: 362 KFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAY 421
FF RLKQDG PNV+TYG LIKGYAK NNL+KMME Y++M++ G+K NQTIFTTIMDAY
Sbjct: 406 NFFNRLKQDGLEPNVVTYGALIKGYAKTNNLDKMMEKYEEMQLRGVKANQTIFTTIMDAY 465
Query: 422 GKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGN 471
GKNKDF SAV+WYKEME G PPDQKAKNILLSLAKTADE+ EAN+++G+
Sbjct: 466 GKNKDFGSAVIWYKEMEQYGVPPDQKAKNILLSLAKTADEQKEANQMVGH 515
>gi|225446761|ref|XP_002278350.1| PREDICTED: pentatricopeptide repeat-containing protein At3g59040
[Vitis vinifera]
gi|302143502|emb|CBI22063.3| unnamed protein product [Vitis vinifera]
Length = 548
Score = 803 bits (2075), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 382/483 (79%), Positives = 430/483 (89%), Gaps = 3/483 (0%)
Query: 1 MGMLAPRKFMQKRRKVEVFKDAADEAGKKNWRRLMNQIEEVGSAVAVLRSERTRGQPLPK 60
+ MLAPRKFMQ+R+K+EVF+DAADEA ++ WRR+M +IEEVGSAV+VL T+ Q LP+
Sbjct: 48 VSMLAPRKFMQRRKKIEVFRDAADEAEQRKWRRMMKEIEEVGSAVSVLS---TKNQALPR 104
Query: 61 DLVLGTLVRLKQLKKWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLS 120
DLVLGTLVR KQLKKW++VSE+LEWL+ Q WWDF+EMDFLML+TAYGKQGDFNKAE+V
Sbjct: 105 DLVLGTLVRFKQLKKWSLVSEILEWLQTQPWWDFSEMDFLMLVTAYGKQGDFNKAERVFG 164
Query: 121 FMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEAN 180
M+KKGY+PSV+SHTALMEAYG+G +Y AE++FRRM SSGP PSALTYQ+ILK+FVE N
Sbjct: 165 DMHKKGYSPSVISHTALMEAYGKGKQYNKAESVFRRMLSSGPEPSALTYQLILKIFVEGN 224
Query: 181 KFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTV 240
KFKEAEE F TLLD+EKSPLKPDQKMFHMMIYMY+KAG YEKARK+F LM ERGV QSTV
Sbjct: 225 KFKEAEETFETLLDDEKSPLKPDQKMFHMMIYMYRKAGNYEKARKIFGLMRERGVPQSTV 284
Query: 241 TYNSLMSFETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDA 300
TYNSLMSFETNYKEVSK YDQMQRAGL+PDVVSYALLINAYGKARREEEALAVFEEMLDA
Sbjct: 285 TYNSLMSFETNYKEVSKTYDQMQRAGLRPDVVSYALLINAYGKARREEEALAVFEEMLDA 344
Query: 301 GVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGA 360
GVRPTHKAYNILLDAFAISGMVDQARTVFK MRRDRC+PDICSYTTMLSAYVNASDMEGA
Sbjct: 345 GVRPTHKAYNILLDAFAISGMVDQARTVFKSMRRDRCTPDICSYTTMLSAYVNASDMEGA 404
Query: 361 EKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDA 420
EKFFRRLKQDGF PNV+TYGTLIKGYAK++NLEKMME Y++M+V+GIK NQ I+T +MDA
Sbjct: 405 EKFFRRLKQDGFEPNVVTYGTLIKGYAKISNLEKMMEKYEEMQVHGIKANQAIYTAMMDA 464
Query: 421 YGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPG 480
YGKNKDF SAV W+KEM CG PPD+KA NILLSLAKT E+ EAN L+G + +N
Sbjct: 465 YGKNKDFGSAVFWFKEMGFCGVPPDRKATNILLSLAKTEAEKEEANLLVGYSSKYSNGQM 524
Query: 481 ING 483
NG
Sbjct: 525 DNG 527
>gi|356536414|ref|XP_003536733.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g59040-like [Glycine max]
Length = 553
Score = 779 bits (2011), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 371/493 (75%), Positives = 428/493 (86%)
Query: 2 GMLAPRKFMQKRRKVEVFKDAADEAGKKNWRRLMNQIEEVGSAVAVLRSERTRGQPLPKD 61
GML PRKFMQ+RRK EVFKDAADEA +KNWRR+M +IEE GSAV+VL SE+ Q +PKD
Sbjct: 41 GMLKPRKFMQRRRKFEVFKDAADEADQKNWRRIMTEIEESGSAVSVLSSEKINNQNIPKD 100
Query: 62 LVLGTLVRLKQLKKWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSF 121
L++GTL+R KQLKKW++V E+L+WLR Q+WWDF +MDF MLITAYGK GDFN AEKVL
Sbjct: 101 LLVGTLIRFKQLKKWHLVVEILDWLRTQNWWDFGKMDFFMLITAYGKLGDFNGAEKVLGL 160
Query: 122 MNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANK 181
MNK GY P+VVS TALMEAYG+GGRY NAEAIFRRMQ GP PSA TYQIILK FV+ NK
Sbjct: 161 MNKNGYVPNVVSQTALMEAYGKGGRYNNAEAIFRRMQKWGPEPSAFTYQIILKTFVQGNK 220
Query: 182 FKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVT 241
++EAEE+F LL++E SPLKPDQKMF+MMIYMYKKAG YEKARK FALMAERG+QQ+TVT
Sbjct: 221 YREAEELFDNLLNDENSPLKPDQKMFNMMIYMYKKAGSYEKARKTFALMAERGIQQTTVT 280
Query: 242 YNSLMSFETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAG 301
YNSLMSFET+YKEVS IYDQMQRA L+PDVVSYALL++AYGKARREEEALAVFEEMLDAG
Sbjct: 281 YNSLMSFETDYKEVSNIYDQMQRADLRPDVVSYALLVSAYGKARREEEALAVFEEMLDAG 340
Query: 302 VRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAE 361
VRPT KAYNILLDAF+ISGMV+QA+TVFK MRRDR PD+CSYTTMLSAYVNA DMEGAE
Sbjct: 341 VRPTRKAYNILLDAFSISGMVEQAQTVFKSMRRDRYFPDLCSYTTMLSAYVNADDMEGAE 400
Query: 362 KFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAY 421
KFF+RL QD F PNV+TYGTLIKGYAK+N+LE +M+ Y++M V GIK NQTI TTIMDAY
Sbjct: 401 KFFKRLIQDDFEPNVVTYGTLIKGYAKINDLEMVMKKYEEMLVRGIKANQTILTTIMDAY 460
Query: 422 GKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGI 481
GK+ DFDSAV W+KEMES G PPDQKAKN+LLSL KT +ER EANEL+G+F+ N+ +
Sbjct: 461 GKSGDFDSAVHWFKEMESNGIPPDQKAKNVLLSLPKTDEEREEANELVGHFSENNSLSKV 520
Query: 482 NGLSISVDEEDDD 494
NG+ VDE++++
Sbjct: 521 NGIVKLVDEDEEN 533
>gi|356575428|ref|XP_003555843.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g59040-like [Glycine max]
Length = 562
Score = 774 bits (1998), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 367/483 (75%), Positives = 422/483 (87%)
Query: 2 GMLAPRKFMQKRRKVEVFKDAADEAGKKNWRRLMNQIEEVGSAVAVLRSERTRGQPLPKD 61
GML PRKFMQ+RRK EVFKD+ADEA +KNWRR+M +IEE GSAV+VL +E+ Q +PKD
Sbjct: 42 GMLKPRKFMQRRRKFEVFKDSADEADQKNWRRIMTEIEESGSAVSVLSAEKINNQNIPKD 101
Query: 62 LVLGTLVRLKQLKKWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSF 121
LV+GTL+R KQLKKWN+V E+LEWLR Q+WWDF +MDF MLITAYGK GDFN AEKVL
Sbjct: 102 LVVGTLIRFKQLKKWNLVVEILEWLRTQNWWDFGKMDFFMLITAYGKLGDFNGAEKVLGL 161
Query: 122 MNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANK 181
MNK GYAP+VVS TALMEAYG+GGRY NAEAIFRRMQ GP PSA TYQIILK FV+ NK
Sbjct: 162 MNKNGYAPNVVSQTALMEAYGKGGRYNNAEAIFRRMQKWGPEPSAFTYQIILKTFVQGNK 221
Query: 182 FKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVT 241
F+EAEE+F LL++E SPLKPDQKMF+MMIYM+KKAG YEKARK FA MAE G+QQ+TVT
Sbjct: 222 FREAEELFDNLLNDENSPLKPDQKMFNMMIYMHKKAGSYEKARKTFAQMAELGIQQTTVT 281
Query: 242 YNSLMSFETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAG 301
YNSLMSFETNYKEVS IYDQMQRA L+PDVVSYALL++AYGKARREEEALAVFEEMLDAG
Sbjct: 282 YNSLMSFETNYKEVSNIYDQMQRADLRPDVVSYALLVSAYGKARREEEALAVFEEMLDAG 341
Query: 302 VRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAE 361
+RPT KAYNILLDAF+ISGMV+QA+TVFK MRRDR PD+CSYTTMLSAY+NA DMEGAE
Sbjct: 342 IRPTRKAYNILLDAFSISGMVEQAQTVFKSMRRDRYFPDLCSYTTMLSAYINADDMEGAE 401
Query: 362 KFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAY 421
KFF+RL QDGF PNV+TYGTLIKGYAK+N+LE +M+ Y++M + GIK NQTI TTIMDAY
Sbjct: 402 KFFKRLIQDGFEPNVVTYGTLIKGYAKINDLEMVMKKYEEMLMRGIKANQTILTTIMDAY 461
Query: 422 GKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGI 481
GK+ DFDSAV W+KEMES G PPDQKAKN+LLSLAKT +ER EANEL+ +F+ ++ P +
Sbjct: 462 GKSGDFDSAVHWFKEMESNGIPPDQKAKNVLLSLAKTDEEREEANELVVHFSENSSLPKV 521
Query: 482 NGL 484
NG+
Sbjct: 522 NGI 524
>gi|297820746|ref|XP_002878256.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297324094|gb|EFH54515.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 582
Score = 772 bits (1994), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 369/471 (78%), Positives = 419/471 (88%), Gaps = 1/471 (0%)
Query: 1 MGMLAPRKFMQKRRKVEVFKDAADEAGKKNWRRLMNQIEEVGSAVAVLRSERTRG-QPLP 59
MGMLAPRKF+QKRRK+EVFKDAADE +K WR LM +IE GSAV VLR RT G Q LP
Sbjct: 43 MGMLAPRKFLQKRRKIEVFKDAADETDQKRWRGLMLEIESTGSAVPVLRQYRTDGDQGLP 102
Query: 60 KDLVLGTLVRLKQLKKWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVL 119
+DLVLGTLVR KQLKKWN+VSE+LEWLR Q+WW+F+EMDFLMLITAYGK G+FN AE+VL
Sbjct: 103 RDLVLGTLVRFKQLKKWNLVSEILEWLRYQNWWNFSEMDFLMLITAYGKLGNFNGAERVL 162
Query: 120 SFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEA 179
S ++K G +P+V+S+TALME+YGRGG+ NAEAIFRRMQSSGP PSA+TYQIILK FVE
Sbjct: 163 SVLSKMGSSPNVISYTALMESYGRGGKCNNAEAIFRRMQSSGPEPSAVTYQIILKTFVEG 222
Query: 180 NKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQST 239
+KFKEAEEVF TLLDE+KSPLKPDQKM+HMMIYMYKKAG Y+KARK+F+ M +GV QST
Sbjct: 223 DKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYDKARKVFSSMVGKGVPQST 282
Query: 240 VTYNSLMSFETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLD 299
VTYNSLMSFETNYKEVSKIYDQMQR+G+QPDVVSYALLI AYG+ARREEEAL+VFEEMLD
Sbjct: 283 VTYNSLMSFETNYKEVSKIYDQMQRSGIQPDVVSYALLIKAYGRARREEEALSVFEEMLD 342
Query: 300 AGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEG 359
AGVRPTHKAYNILLDAFAISGMV+QA+TVFK MRRDR PD+ SYTTMLSAYVNASDMEG
Sbjct: 343 AGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEG 402
Query: 360 AEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMD 419
AEKFF+R+K DGF PN++TYGT+IKGYAK N++EKMME+Y+KMR++GIK NQTI TTIMD
Sbjct: 403 AEKFFKRIKVDGFEPNIVTYGTMIKGYAKANDVEKMMEVYEKMRLSGIKANQTILTTIMD 462
Query: 420 AYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLG 470
A G+ KDF SA+ WYKEMESCG PPDQKAKN+LLSL T DE +EA EL G
Sbjct: 463 ASGRCKDFGSALGWYKEMESCGVPPDQKAKNVLLSLYSTQDELDEAKELTG 513
>gi|30694913|ref|NP_191463.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|218525907|sp|Q9LYT2.2|PP287_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g59040
gi|332646344|gb|AEE79865.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 583
Score = 762 bits (1967), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 382/527 (72%), Positives = 441/527 (83%), Gaps = 10/527 (1%)
Query: 1 MGMLAPRKFMQKRRKVEVFKDAADEAGKKNWRRLMNQIEEVGSAVAVLRSERTRG-QPLP 59
MGMLAPRKF+QKRRK+EVFKDAADE +K WR LM +IE GSAV VLR +T G Q LP
Sbjct: 43 MGMLAPRKFLQKRRKMEVFKDAADETDQKRWRGLMLEIESTGSAVPVLRQYKTDGDQGLP 102
Query: 60 KDLVLGTLVRLKQLKKWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVL 119
+DLVLGTLVR KQLKKWN+VSE+LEWLR Q+WW+F+E+DFLMLITAYGK G+FN AE+VL
Sbjct: 103 RDLVLGTLVRFKQLKKWNLVSEILEWLRYQNWWNFSEIDFLMLITAYGKLGNFNGAERVL 162
Query: 120 SFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEA 179
S ++K G P+V+S+TALME+YGRGG+ NAEAIFRRMQSSGP PSA+TYQIILK FVE
Sbjct: 163 SVLSKMGSTPNVISYTALMESYGRGGKCNNAEAIFRRMQSSGPEPSAITYQIILKTFVEG 222
Query: 180 NKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQST 239
+KFKEAEEVF TLLDE+KSPLKPDQKM+HMMIYMYKKAG YEKARK+F+ M +GV QST
Sbjct: 223 DKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYEKARKVFSSMVGKGVPQST 282
Query: 240 VTYNSLMSFETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLD 299
VTYNSLMSFET+YKEVSKIYDQMQR+ +QPDVVSYALLI AYG+ARREEEAL+VFEEMLD
Sbjct: 283 VTYNSLMSFETSYKEVSKIYDQMQRSDIQPDVVSYALLIKAYGRARREEEALSVFEEMLD 342
Query: 300 AGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEG 359
AGVRPTHKAYNILLDAFAISGMV+QA+TVFK MRRDR PD+ SYTTMLSAYVNASDMEG
Sbjct: 343 AGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEG 402
Query: 360 AEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMD 419
AEKFF+R+K DGF PN++TYGTLIKGYAK N++EKMME+Y+KMR++GIK NQTI TTIMD
Sbjct: 403 AEKFFKRIKVDGFEPNIVTYGTLIKGYAKANDVEKMMEVYEKMRLSGIKANQTILTTIMD 462
Query: 420 AYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEP 479
A G+ K+F SA+ WYKEMESCG PPDQKAKN+LLSLA T DE EA EL G N
Sbjct: 463 ASGRCKNFGSALGWYKEMESCGVPPDQKAKNVLLSLASTQDELEEAKELTGIRNET---- 518
Query: 480 GINGLSISVDEEDDDDDDDEDDDDNIYHDGDGDGDGDDNEDDAEETI 526
+ + DDD+E +D D + +GDD++DDA ET+
Sbjct: 519 -----ATIIARVYGSDDDEEGVEDISSESSDDEDEGDDDDDDARETV 560
>gi|42572723|ref|NP_974457.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332646343|gb|AEE79864.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 590
Score = 761 bits (1964), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 382/527 (72%), Positives = 441/527 (83%), Gaps = 10/527 (1%)
Query: 1 MGMLAPRKFMQKRRKVEVFKDAADEAGKKNWRRLMNQIEEVGSAVAVLRSERTRG-QPLP 59
MGMLAPRKF+QKRRK+EVFKDAADE +K WR LM +IE GSAV VLR +T G Q LP
Sbjct: 50 MGMLAPRKFLQKRRKMEVFKDAADETDQKRWRGLMLEIESTGSAVPVLRQYKTDGDQGLP 109
Query: 60 KDLVLGTLVRLKQLKKWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVL 119
+DLVLGTLVR KQLKKWN+VSE+LEWLR Q+WW+F+E+DFLMLITAYGK G+FN AE+VL
Sbjct: 110 RDLVLGTLVRFKQLKKWNLVSEILEWLRYQNWWNFSEIDFLMLITAYGKLGNFNGAERVL 169
Query: 120 SFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEA 179
S ++K G P+V+S+TALME+YGRGG+ NAEAIFRRMQSSGP PSA+TYQIILK FVE
Sbjct: 170 SVLSKMGSTPNVISYTALMESYGRGGKCNNAEAIFRRMQSSGPEPSAITYQIILKTFVEG 229
Query: 180 NKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQST 239
+KFKEAEEVF TLLDE+KSPLKPDQKM+HMMIYMYKKAG YEKARK+F+ M +GV QST
Sbjct: 230 DKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYEKARKVFSSMVGKGVPQST 289
Query: 240 VTYNSLMSFETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLD 299
VTYNSLMSFET+YKEVSKIYDQMQR+ +QPDVVSYALLI AYG+ARREEEAL+VFEEMLD
Sbjct: 290 VTYNSLMSFETSYKEVSKIYDQMQRSDIQPDVVSYALLIKAYGRARREEEALSVFEEMLD 349
Query: 300 AGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEG 359
AGVRPTHKAYNILLDAFAISGMV+QA+TVFK MRRDR PD+ SYTTMLSAYVNASDMEG
Sbjct: 350 AGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEG 409
Query: 360 AEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMD 419
AEKFF+R+K DGF PN++TYGTLIKGYAK N++EKMME+Y+KMR++GIK NQTI TTIMD
Sbjct: 410 AEKFFKRIKVDGFEPNIVTYGTLIKGYAKANDVEKMMEVYEKMRLSGIKANQTILTTIMD 469
Query: 420 AYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEP 479
A G+ K+F SA+ WYKEMESCG PPDQKAKN+LLSLA T DE EA EL G N
Sbjct: 470 ASGRCKNFGSALGWYKEMESCGVPPDQKAKNVLLSLASTQDELEEAKELTGIRNET---- 525
Query: 480 GINGLSISVDEEDDDDDDDEDDDDNIYHDGDGDGDGDDNEDDAEETI 526
+ + DDD+E +D D + +GDD++DDA ET+
Sbjct: 526 -----ATIIARVYGSDDDEEGVEDISSESSDDEDEGDDDDDDARETV 567
>gi|357444885|ref|XP_003592720.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355481768|gb|AES62971.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 553
Score = 756 bits (1952), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 365/481 (75%), Positives = 415/481 (86%)
Query: 2 GMLAPRKFMQKRRKVEVFKDAADEAGKKNWRRLMNQIEEVGSAVAVLRSERTRGQPLPKD 61
GML PRKFMQ++RK+ VFKDAADEA +KNW RLM I+E GSAV+VL SE+ + Q +PK
Sbjct: 46 GMLTPRKFMQRKRKMVVFKDAADEAEQKNWWRLMKLIDETGSAVSVLNSEKMKNQTIPKA 105
Query: 62 LVLGTLVRLKQLKKWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSF 121
LV+GTL+R KQLKKWN+V+E+LEWLR Q+WWDF +MDF MLITAYGK GDFN AEKVL
Sbjct: 106 LVVGTLMRFKQLKKWNLVAEILEWLRAQNWWDFGKMDFFMLITAYGKLGDFNGAEKVLGL 165
Query: 122 MNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANK 181
MNK GYAP+VVS TALMEAYG+GGRY NAEAIFRRMQ+ GP PSA TYQIILK FV+ NK
Sbjct: 166 MNKNGYAPNVVSQTALMEAYGKGGRYNNAEAIFRRMQTFGPEPSAFTYQIILKTFVQGNK 225
Query: 182 FKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVT 241
FKEAEEVF LL++EKSPL+PDQKMF+MMIYMYKK+G +EKAR+ FALMAERG++++TVT
Sbjct: 226 FKEAEEVFDKLLNDEKSPLRPDQKMFNMMIYMYKKSGSHEKARQTFALMAERGIKKATVT 285
Query: 242 YNSLMSFETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAG 301
YNSLMSFETNYKEVS IYDQMQRA L+PDVVSYALLINAYGKARREEEALAVFEEMLDAG
Sbjct: 286 YNSLMSFETNYKEVSNIYDQMQRADLRPDVVSYALLINAYGKARREEEALAVFEEMLDAG 345
Query: 302 VRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAE 361
VRPT KAYNILLDAF+ISGMV+QAR VFK MRRD+ PD+CSYTTMLSAYVNA DMEGAE
Sbjct: 346 VRPTRKAYNILLDAFSISGMVEQARIVFKSMRRDKYMPDLCSYTTMLSAYVNAPDMEGAE 405
Query: 362 KFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAY 421
KFF+RL QDGF PNV+TYGTLIKGYAK N++EK+ME Y++M GIK NQTI TTIMDA+
Sbjct: 406 KFFKRLIQDGFEPNVVTYGTLIKGYAKANDIEKVMEKYEEMLGRGIKANQTILTTIMDAH 465
Query: 422 GKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGI 481
GKN DFDSAV W+KEM G PDQKAKNILLSLAKT ++ EANEL+ + NN P +
Sbjct: 466 GKNGDFDSAVNWFKEMALNGLLPDQKAKNILLSLAKTEEDIKEANELVLHSIEINNLPKV 525
Query: 482 N 482
N
Sbjct: 526 N 526
>gi|242078445|ref|XP_002443991.1| hypothetical protein SORBIDRAFT_07g005470 [Sorghum bicolor]
gi|241940341|gb|EES13486.1| hypothetical protein SORBIDRAFT_07g005470 [Sorghum bicolor]
Length = 602
Score = 751 bits (1939), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 348/498 (69%), Positives = 422/498 (84%), Gaps = 8/498 (1%)
Query: 2 GMLAPRKFMQKRRKVEVFKDAADEAGKKNWRRLMNQIEEVGSAVAVLRSERTRGQPLPKD 61
GMLA RKFMQ+++K EVFKDAADEA + NWRR+M +IEE GSAV +L+++R+ PLP+D
Sbjct: 46 GMLATRKFMQRKKKEEVFKDAADEAEQMNWRRMMREIEEAGSAVPILKTQRSGKGPLPRD 105
Query: 62 LVLGTLVRLKQLKKWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSF 121
++LGTLVR KQLKKWN+VSE+LEWLR Q WWDF+EMDFLML+TAYGK GDF++AE+VL +
Sbjct: 106 VILGTLVRFKQLKKWNIVSEILEWLRTQHWWDFSEMDFLMLVTAYGKLGDFSRAERVLKY 165
Query: 122 MNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANK 181
MNKKGY PSV+S T LMEAYGRG +Y+ AEA+FRRMQ+SGP PS +TYQIILK VE +K
Sbjct: 166 MNKKGYQPSVISQTGLMEAYGRGKQYRKAEAVFRRMQTSGPEPSPVTYQIILKSLVEGDK 225
Query: 182 FKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVT 241
+KEAE +F LL+E+++ KPDQKMFHMMIYMYKKAG Y +ARKLFA M+ER + STVT
Sbjct: 226 YKEAEAIFEDLLNEKRTSFKPDQKMFHMMIYMYKKAGDYAQARKLFAQMSERKIPLSTVT 285
Query: 242 YNSLMSFETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAG 301
+NSLMSFET+YKEVS IYDQMQRAG++PDVVSY+LLI AYGKARREEEALAVFEEMLDAG
Sbjct: 286 FNSLMSFETDYKEVSSIYDQMQRAGMKPDVVSYSLLIKAYGKARREEEALAVFEEMLDAG 345
Query: 302 VRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAE 361
VRPT K+YNILLDAFAISG+VD+A TVFK MRR R PD+CSYTTM+ AYVNASDM GAE
Sbjct: 346 VRPTRKSYNILLDAFAISGLVDEANTVFKAMRRHRVEPDLCSYTTMVLAYVNASDMNGAE 405
Query: 362 KFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAY 421
KFFRR+K DG PNV+ YGTL+KGY+K+NN+EK+M +Y++MR+ G++PNQTI+TTIMDA+
Sbjct: 406 KFFRRIKDDGLKPNVVVYGTLMKGYSKLNNVEKVMRVYERMRIQGVEPNQTIYTTIMDAH 465
Query: 422 GKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGI 481
G+N DF +AV+W+KEME+ G+PPDQKAKNILLSLA T +E+ EANEL+GN G
Sbjct: 466 GRNSDFGNAVIWFKEMEARGYPPDQKAKNILLSLANTPEEQQEANELVGN--------GA 517
Query: 482 NGLSISVDEEDDDDDDDE 499
L + D E+ DDD E
Sbjct: 518 IQLEVKPDNEEVDDDGHE 535
>gi|413917008|gb|AFW56940.1| plastid transcriptionally active 12-like protein [Zea mays]
Length = 600
Score = 747 bits (1929), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 345/498 (69%), Positives = 421/498 (84%), Gaps = 8/498 (1%)
Query: 2 GMLAPRKFMQKRRKVEVFKDAADEAGKKNWRRLMNQIEEVGSAVAVLRSERTRGQPLPKD 61
GMLA RKFMQ+++K EVFKD ADE + NWRR+M +IE+ GSAV +L+++R R +PLP+D
Sbjct: 46 GMLATRKFMQRKKKEEVFKDGADETEQMNWRRMMREIEQEGSAVPILKTQRNRKEPLPRD 105
Query: 62 LVLGTLVRLKQLKKWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSF 121
++LGTL+R KQLKKWN+VSE+LEWLR Q WWDF+EMDFLML+TAYGK GDF++AE+VL +
Sbjct: 106 VILGTLIRFKQLKKWNIVSEILEWLRTQHWWDFSEMDFLMLVTAYGKLGDFSRAERVLKY 165
Query: 122 MNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANK 181
MNKKGY PSV+S T LMEAYGRG +Y+ AEA+FRRMQ+SGP+PS +TYQIILK VE +K
Sbjct: 166 MNKKGYQPSVISQTGLMEAYGRGKQYRKAEAVFRRMQTSGPQPSPVTYQIILKSLVEGDK 225
Query: 182 FKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVT 241
+KEAE +F LL+E+++ KPDQKMFHMMIYMYKKAG Y +ARKLFA M+ERG+ STVT
Sbjct: 226 YKEAEAIFEDLLNEKRTSFKPDQKMFHMMIYMYKKAGDYAQARKLFAQMSERGIPLSTVT 285
Query: 242 YNSLMSFETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAG 301
+NSLMSFET YKEVS IYDQMQRAGL+PDVVSY+LLI AYGKARREEEALAVFEEMLDAG
Sbjct: 286 FNSLMSFETEYKEVSNIYDQMQRAGLKPDVVSYSLLIKAYGKARREEEALAVFEEMLDAG 345
Query: 302 VRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAE 361
VRPT K+YNILLDAFAISG+V++A TVF+ MRR R PD+CSYTTM+ AYVNAS+M GAE
Sbjct: 346 VRPTRKSYNILLDAFAISGLVEEANTVFRAMRRHRVEPDLCSYTTMVLAYVNASEMNGAE 405
Query: 362 KFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAY 421
KFFRR+K+DG PNV+ YGTL+KGY+K+NNLEK+M +Y++MR+ G++PNQTI+TTIMDA
Sbjct: 406 KFFRRIKEDGLKPNVVVYGTLMKGYSKLNNLEKVMRVYERMRIQGVEPNQTIYTTIMDAQ 465
Query: 422 GKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGI 481
G+N DF +AV+W+KEME+ G+PPDQKAKNILLSLAKT +E EAN+L+GN G
Sbjct: 466 GRNSDFGNAVIWFKEMEARGYPPDQKAKNILLSLAKTPEEEQEANDLVGN--------GP 517
Query: 482 NGLSISVDEEDDDDDDDE 499
L + D E D DD E
Sbjct: 518 VQLEVKPDGEVDGDDGHE 535
>gi|115475155|ref|NP_001061174.1| Os08g0191900 [Oryza sativa Japonica Group]
gi|40253652|dbj|BAD05595.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113623143|dbj|BAF23088.1| Os08g0191900 [Oryza sativa Japonica Group]
gi|125602452|gb|EAZ41777.1| hypothetical protein OsJ_26318 [Oryza sativa Japonica Group]
gi|215695295|dbj|BAG90486.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215704436|dbj|BAG93870.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 609
Score = 741 bits (1914), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 336/470 (71%), Positives = 414/470 (88%)
Query: 2 GMLAPRKFMQKRRKVEVFKDAADEAGKKNWRRLMNQIEEVGSAVAVLRSERTRGQPLPKD 61
GML RKFMQK++K EV+KDAADEA +KNWR +M +IEE GSAV++L+++R++ +PLP+D
Sbjct: 48 GMLTTRKFMQKKKKEEVYKDAADEAEQKNWRMMMREIEESGSAVSILKTQRSKKEPLPRD 107
Query: 62 LVLGTLVRLKQLKKWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSF 121
VLGTL+R KQLKKWN+VSE+LEWLR Q WW+F+EMDFLML+TAYGK GDF++AE+VL +
Sbjct: 108 AVLGTLMRFKQLKKWNLVSEILEWLRTQHWWNFSEMDFLMLVTAYGKLGDFSRAERVLKY 167
Query: 122 MNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANK 181
MNKKGY PSV+S TALMEAYGR +Y+ AEA+FRRMQ+SGP PSA+TYQIILK FVE +K
Sbjct: 168 MNKKGYKPSVISQTALMEAYGRAKQYRKAEAVFRRMQTSGPEPSAVTYQIILKSFVEGDK 227
Query: 182 FKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVT 241
+KEAE +F LL+E+++ KPDQKMFHMMIYMYKKAG Y +ARKLFA M+ERG+ STVT
Sbjct: 228 YKEAEAIFEDLLNEKRASFKPDQKMFHMMIYMYKKAGDYAQARKLFAQMSERGIPLSTVT 287
Query: 242 YNSLMSFETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAG 301
+NSLMSFETNYKEVS IYDQMQR L+PDVVSY+LLI AYGKARREEEALAVFEEMLDAG
Sbjct: 288 FNSLMSFETNYKEVSSIYDQMQRTALKPDVVSYSLLIKAYGKARREEEALAVFEEMLDAG 347
Query: 302 VRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAE 361
VRPT K+YNIL+DAFAISG+V++A TVFK MRR R PD+CSYTTM+ AYVNASDM+GAE
Sbjct: 348 VRPTRKSYNILIDAFAISGLVEEAHTVFKAMRRHRVEPDLCSYTTMVLAYVNASDMDGAE 407
Query: 362 KFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAY 421
KFFRR+K+DG PNV+ YGTL+KGY+K+NN+E++M +Y++MR+ G++PNQTI+TTIMD +
Sbjct: 408 KFFRRIKEDGLKPNVVVYGTLMKGYSKLNNVERVMRVYERMRMQGVEPNQTIYTTIMDVH 467
Query: 422 GKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGN 471
G+N DF +AV+W+KEME+ G+P D+KAKNILLSLAKT +E+ EANEL GN
Sbjct: 468 GRNSDFGNAVIWFKEMEARGYPADKKAKNILLSLAKTPEEQEEANELTGN 517
>gi|125560423|gb|EAZ05871.1| hypothetical protein OsI_28108 [Oryza sativa Indica Group]
Length = 608
Score = 739 bits (1908), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 335/470 (71%), Positives = 414/470 (88%)
Query: 2 GMLAPRKFMQKRRKVEVFKDAADEAGKKNWRRLMNQIEEVGSAVAVLRSERTRGQPLPKD 61
GML RKFMQK++K EV+KDAADEA +KNWR +M +IEE GSAV++L+++R++ +PLP+D
Sbjct: 48 GMLTTRKFMQKKKKEEVYKDAADEAEQKNWRMMMREIEESGSAVSILKTQRSKKEPLPRD 107
Query: 62 LVLGTLVRLKQLKKWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSF 121
VLGTL+R KQLKKWN+VSE+LEWLR Q WW+F+EMDFLML+TAYGK GDF++AE+VL +
Sbjct: 108 AVLGTLMRFKQLKKWNLVSEILEWLRTQHWWNFSEMDFLMLVTAYGKLGDFSRAERVLKY 167
Query: 122 MNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANK 181
MNKKGY PSV+S TALMEAYGR +Y+ AEA+FRRMQ+SGP PSA+TYQIILK FVE +K
Sbjct: 168 MNKKGYKPSVISQTALMEAYGRAKQYRKAEAVFRRMQTSGPEPSAVTYQIILKSFVEGDK 227
Query: 182 FKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVT 241
+KEAE +F LL+E+++ KPDQKMFHMMIYMYKKAG Y +ARKLFA M+ERG+ STVT
Sbjct: 228 YKEAEAIFEDLLNEKRASFKPDQKMFHMMIYMYKKAGDYAQARKLFAQMSERGIPLSTVT 287
Query: 242 YNSLMSFETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAG 301
+NSLMSFET+YKEVS IYDQMQR L+PDVVSY+LLI AYGKARREEEALAVFEEMLDAG
Sbjct: 288 FNSLMSFETDYKEVSNIYDQMQRTALKPDVVSYSLLIKAYGKARREEEALAVFEEMLDAG 347
Query: 302 VRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAE 361
VRPT K+YNIL+DAFAISG+V++A TVFK MRR R PD+CSYTTM+ AYVNASDM+GAE
Sbjct: 348 VRPTRKSYNILIDAFAISGLVEEAHTVFKAMRRHRVEPDLCSYTTMVLAYVNASDMDGAE 407
Query: 362 KFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAY 421
KFFRR+K+DG PNV+ YGTL+KGY+K+NN+E++M +Y++MR+ G++PNQTI+TTIMD +
Sbjct: 408 KFFRRIKEDGLKPNVVVYGTLMKGYSKLNNVERVMRVYERMRMQGVEPNQTIYTTIMDVH 467
Query: 422 GKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGN 471
G+N DF +AV+W+KEME+ G+P D+KAKNILLSLAKT +E+ EANEL GN
Sbjct: 468 GRNSDFGNAVIWFKEMEARGYPADKKAKNILLSLAKTPEEQEEANELTGN 517
>gi|357144696|ref|XP_003573383.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g59040-like [Brachypodium distachyon]
Length = 606
Score = 732 bits (1889), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 338/496 (68%), Positives = 424/496 (85%), Gaps = 2/496 (0%)
Query: 2 GMLAPRKFMQKRRKVEVFKDAADEAGKKNWRRLMNQIEEVGSAVAVLRSERTRGQPLPKD 61
GM A RKF++K+++ EVF DAADEA +KNWRR+MN+IEE GSAV++L+++R+ +PLP+D
Sbjct: 48 GMFATRKFVRKKKE-EVFTDAADEAKQKNWRRMMNEIEESGSAVSILKTQRSTKEPLPRD 106
Query: 62 LVLGTLVRLKQLKKWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSF 121
VLGTLVR KQLKKWN+VSE+LEWLR Q WWDF+EMDFLML+TAYGK GDF++AE+VL +
Sbjct: 107 AVLGTLVRFKQLKKWNLVSEILEWLRTQHWWDFSEMDFLMLVTAYGKLGDFSRAERVLKY 166
Query: 122 MNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANK 181
MNKKGY P+V+S TALMEAYGR +Y+ AEA+F RMQ+SGP PS +TYQIILK VE +K
Sbjct: 167 MNKKGYRPTVISQTALMEAYGRAKQYRKAEAVFHRMQTSGPEPSPITYQIILKSLVEGDK 226
Query: 182 FKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVT 241
+KEAE +F LL E+++ KPDQKMFHMMIYMYKK+G Y +ARKLFA M+ERG+ QSTVT
Sbjct: 227 YKEAEAIFEDLLSEKRTFFKPDQKMFHMMIYMYKKSGDYAQARKLFAQMSERGIPQSTVT 286
Query: 242 YNSLMSFETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAG 301
+NSLMSFE +YKEVS IYDQMQRAGL+PDVVSY+LLI AYGKARREEEA AVFEEMLDAG
Sbjct: 287 FNSLMSFEGDYKEVSSIYDQMQRAGLKPDVVSYSLLIKAYGKARREEEASAVFEEMLDAG 346
Query: 302 VRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAE 361
+RPT K+YNILLDAFAISG+V++A+TVFK MRR R PD+CSYTTML AYVNASDM+GAE
Sbjct: 347 IRPTRKSYNILLDAFAISGLVEEAQTVFKTMRRHRVEPDLCSYTTMLLAYVNASDMDGAE 406
Query: 362 KFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAY 421
KFFRR+K+DG PNV+ YGTL+KGY+K++N+EK+M +Y++MR+ G++PNQTIFTTIMD +
Sbjct: 407 KFFRRIKEDGLRPNVVVYGTLMKGYSKLDNVEKVMRVYERMRMQGVEPNQTIFTTIMDVH 466
Query: 422 GKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGI 481
G+N DF +AV+W+ EME+ G+PPD+KAKNILLSLAKT +E+ EANEL GN E
Sbjct: 467 GRNSDFGNAVIWFNEMETRGYPPDKKAKNILLSLAKTPEEQQEANELTGN-GAIQLEVKP 525
Query: 482 NGLSISVDEEDDDDDD 497
+G++ +D++ D+ +
Sbjct: 526 SGMTSGLDKDGADEHE 541
>gi|7529747|emb|CAB86932.1| putative protein [Arabidopsis thaliana]
gi|24030379|gb|AAN41351.1| unknown protein [Arabidopsis thaliana]
Length = 526
Score = 731 bits (1887), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 368/512 (71%), Positives = 426/512 (83%), Gaps = 10/512 (1%)
Query: 16 VEVFKDAADEAGKKNWRRLMNQIEEVGSAVAVLRSERTRG-QPLPKDLVLGTLVRLKQLK 74
+EVFKDAADE +K WR LM +IE GSAV VLR +T G Q LP+DLVLGTLVR KQLK
Sbjct: 1 MEVFKDAADETDQKRWRGLMLEIESTGSAVPVLRQYKTDGDQGLPRDLVLGTLVRFKQLK 60
Query: 75 KWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSH 134
KWN+VSE+LEWLR Q+WW+F+E+DFLMLITAYGK G+FN AE+VLS ++K G P+V+S+
Sbjct: 61 KWNLVSEILEWLRYQNWWNFSEIDFLMLITAYGKLGNFNGAERVLSVLSKMGSTPNVISY 120
Query: 135 TALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLD 194
TALME+YGRGG+ NAEAIFRRMQSSGP PSA+TYQIILK FVE +KFKEAEEVF TLLD
Sbjct: 121 TALMESYGRGGKCNNAEAIFRRMQSSGPEPSAITYQIILKTFVEGDKFKEAEEVFETLLD 180
Query: 195 EEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKE 254
E+KSPLKPDQKM+HMMIYMYKKAG YEKARK+F+ M +GV QSTVTYNSLMSFET+YKE
Sbjct: 181 EKKSPLKPDQKMYHMMIYMYKKAGNYEKARKVFSSMVGKGVPQSTVTYNSLMSFETSYKE 240
Query: 255 VSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLD 314
VSKIYDQMQR+ +QPDVVSYALLI AYG+ARREEEAL+VFEEMLDAGVRPTHKAYNILLD
Sbjct: 241 VSKIYDQMQRSDIQPDVVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLD 300
Query: 315 AFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVP 374
AFAISGMV+QA+TVFK MRRDR PD+ SYTTMLSAYVNASDMEGAEKFF+R+K DGF P
Sbjct: 301 AFAISGMVEQAKTVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEP 360
Query: 375 NVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWY 434
N++TYGTLIKGYAK N++EKMME+Y+KMR++GIK NQTI TTIMDA G+ K+F SA+ WY
Sbjct: 361 NIVTYGTLIKGYAKANDVEKMMEVYEKMRLSGIKANQTILTTIMDASGRCKNFGSALGWY 420
Query: 435 KEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGINGLSISVDEEDDD 494
KEMESCG PPDQKAKN+LLSLA T DE EA EL G N + +
Sbjct: 421 KEMESCGVPPDQKAKNVLLSLASTQDELEEAKELTGIRNET---------ATIIARVYGS 471
Query: 495 DDDDEDDDDNIYHDGDGDGDGDDNEDDAEETI 526
DDD+E +D D + +GDD++DDA ET+
Sbjct: 472 DDDEEGVEDISSESSDDEDEGDDDDDDARETV 503
>gi|449517395|ref|XP_004165731.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g59040-like, partial [Cucumis sativus]
Length = 303
Score = 446 bits (1146), Expect = e-122, Method: Compositional matrix adjust.
Identities = 210/261 (80%), Positives = 237/261 (90%)
Query: 1 MGMLAPRKFMQKRRKVEVFKDAADEAGKKNWRRLMNQIEEVGSAVAVLRSERTRGQPLPK 60
MGML PRKF+QKR+K+EVFKD ADEA +KNWRRLMN+IEE GSAV+VLRSER + + +PK
Sbjct: 43 MGMLTPRKFLQKRKKLEVFKDEADEAEQKNWRRLMNEIEETGSAVSVLRSERIKNEAIPK 102
Query: 61 DLVLGTLVRLKQLKKWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLS 120
DLVLGTLVR KQLKKWN+VSE+LEWLR QSWW+F+EMDF+MLITAYGK GDFN+AEKVL+
Sbjct: 103 DLVLGTLVRFKQLKKWNLVSEILEWLRTQSWWNFSEMDFVMLITAYGKLGDFNRAEKVLN 162
Query: 121 FMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEAN 180
MNKKGYAP+VVSHTALMEAYGRG RY NAEAIFRRMQS GP PSALTYQI+LK FVE +
Sbjct: 163 LMNKKGYAPNVVSHTALMEAYGRGRRYNNAEAIFRRMQSGGPEPSALTYQIMLKTFVEGS 222
Query: 181 KFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTV 240
KFKEAEE+F +LL++EK LKPDQKMFHM+IYM+KKAG YEKARK+FA MA RGV Q+TV
Sbjct: 223 KFKEAEELFDSLLNKEKPVLKPDQKMFHMIIYMFKKAGNYEKARKVFAEMAARGVPQTTV 282
Query: 241 TYNSLMSFETNYKEVSKIYDQ 261
TYNSLMSFETNYKEVSKIYDQ
Sbjct: 283 TYNSLMSFETNYKEVSKIYDQ 303
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 71/154 (46%), Gaps = 6/154 (3%)
Query: 251 NYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYN 310
++ K+ + M + G P+VVS+ L+ AYG+ RR A A+F M G P+ Y
Sbjct: 153 DFNRAEKVLNLMNKKGYAPNVVSHTALMEAYGRGRRYNNAEAIFRRMQSGGPEPSALTYQ 212
Query: 311 ILLDAFAISGMVDQARTVFKCM---RRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRL 367
I+L F +A +F + + PD + ++ + A + E A K F +
Sbjct: 213 IMLKTFVEGSKFKEAEELFDSLLNKEKPVLKPDQKMFHMIIYMFKKAGNYEKARKVFAEM 272
Query: 368 KQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDK 401
G +TY +L+ + N +++ +IYD+
Sbjct: 273 AARGVPQTTVTYNSLM---SFETNYKEVSKIYDQ 303
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/151 (25%), Positives = 77/151 (50%), Gaps = 5/151 (3%)
Query: 309 YNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLK 368
+ +L+ A+ G ++A V M + +P++ S+T ++ AY AE FRR++
Sbjct: 141 FVMLITAYGKLGDFNRAEKVLNLMNKKGYAPNVVSHTALMEAYGRGRRYNNAEAIFRRMQ 200
Query: 369 QDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNG----IKPNQTIFTTIMDAYGKN 424
G P+ +TY ++K + + + ++ E++D + +N +KP+Q +F I+ + K
Sbjct: 201 SGGPEPSALTYQIMLKTFVEGSKFKEAEELFDSL-LNKEKPVLKPDQKMFHMIIYMFKKA 259
Query: 425 KDFDSAVVWYKEMESCGFPPDQKAKNILLSL 455
+++ A + EM + G P N L+S
Sbjct: 260 GNYEKARKVFAEMAARGVPQTTVTYNSLMSF 290
Score = 47.4 bits (111), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 26/130 (20%), Positives = 59/130 (45%), Gaps = 3/130 (2%)
Query: 344 YTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMR 403
+ +++AY D AEK + + G+ PNV+++ L++ Y + I+ +M+
Sbjct: 141 FVMLITAYGKLGDFNRAEKVLNLMNKKGYAPNVVSHTALMEAYGRGRRYNNAEAIFRRMQ 200
Query: 404 VNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEM---ESCGFPPDQKAKNILLSLAKTAD 460
G +P+ + ++ + + F A + + E PDQK ++++ + K A
Sbjct: 201 SGGPEPSALTYQIMLKTFVEGSKFKEAEELFDSLLNKEKPVLKPDQKMFHMIIYMFKKAG 260
Query: 461 ERNEANELLG 470
+A ++
Sbjct: 261 NYEKARKVFA 270
>gi|449533905|ref|XP_004173911.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g59040-like, partial [Cucumis sativus]
Length = 299
Score = 424 bits (1090), Expect = e-116, Method: Compositional matrix adjust.
Identities = 199/231 (86%), Positives = 219/231 (94%)
Query: 240 VTYNSLMSFETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLD 299
VTYNSLMSFETNYKEVSKIYDQMQRAGLQPDVVSYALLI+AYGKARREEEALAVFEEMLD
Sbjct: 1 VTYNSLMSFETNYKEVSKIYDQMQRAGLQPDVVSYALLISAYGKARREEEALAVFEEMLD 60
Query: 300 AGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEG 359
AG+RPTHKAYNILLDAFAISGMV+QA+ VFK M+RDRCSPDICSYTTMLSAYVNASDMEG
Sbjct: 61 AGIRPTHKAYNILLDAFAISGMVEQAKIVFKSMKRDRCSPDICSYTTMLSAYVNASDMEG 120
Query: 360 AEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMD 419
AE FFRRLKQDGF PNV+TYGTLIKGYAK+NNLEKM++ Y++M+VNGI+ NQTI TTIMD
Sbjct: 121 AEIFFRRLKQDGFRPNVVTYGTLIKGYAKINNLEKMIKRYEEMKVNGIRVNQTILTTIMD 180
Query: 420 AYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLG 470
AYGKNKDF SAV+W+ E+ESCG PDQKAKNILLSLAKTA+E +EAN+L+G
Sbjct: 181 AYGKNKDFGSAVIWFNEIESCGLRPDQKAKNILLSLAKTAEELDEANQLVG 231
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 111/218 (50%), Gaps = 6/218 (2%)
Query: 111 DFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQ 170
++ + K+ M + G P VVS+ L+ AYG+ R + A A+F M +G RP+ Y
Sbjct: 12 NYKEVSKIYDQMQRAGLQPDVVSYALLISAYGKARREEEALAVFEEMLDAGIRPTHKAYN 71
Query: 171 IILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALM 230
I+L F + ++A+ VF ++ ++ PD + M+ Y A E A F +
Sbjct: 72 ILLDAFAISGMVEQAKIVFKSM---KRDRCSPDICSYTTMLSAYVNASDMEGAEIFFRRL 128
Query: 231 AERGVQQSTVTYNSLM---SFETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARRE 287
+ G + + VTY +L+ + N +++ K Y++M+ G++ + +++AYGK +
Sbjct: 129 KQDGFRPNVVTYGTLIKGYAKINNLEKMIKRYEEMKVNGIRVNQTILTTIMDAYGKNKDF 188
Query: 288 EEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQA 325
A+ F E+ G+RP KA NILL + +D+A
Sbjct: 189 GSAVIWFNEIESCGLRPDQKAKNILLSLAKTAEELDEA 226
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/169 (23%), Positives = 73/169 (43%), Gaps = 32/169 (18%)
Query: 101 MLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSS 160
+L+ A+ G +A+ V M + +P + S+T ++ AY + AE FRR++
Sbjct: 72 ILLDAFAISGMVEQAKIVFKSMKRDRCSPDICSYTTMLSAYVNASDMEGAEIFFRRLKQD 131
Query: 161 GPRPSALTYQIILKLFVEANKF----KEAEE-----------VFMTLLDE---------- 195
G RP+ +TY ++K + + N K EE + T++D
Sbjct: 132 GFRPNVVTYGTLIKGYAKINNLEKMIKRYEEMKVNGIRVNQTILTTIMDAYGKNKDFGSA 191
Query: 196 -------EKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQ 237
E L+PDQK ++++ + K A ++A +L ++ Q
Sbjct: 192 VIWFNEIESCGLRPDQKAKNILLSLAKTAEELDEANQLVGYSSQSSSPQ 240
>gi|168000162|ref|XP_001752785.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162695948|gb|EDQ82289.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 482
Score = 399 bits (1025), Expect = e-108, Method: Compositional matrix adjust.
Identities = 189/442 (42%), Positives = 289/442 (65%), Gaps = 3/442 (0%)
Query: 31 WRRLMNQIEEVGSAVAVLRSERTRGQPLPKDLVLGTLVRLKQLKKWNVVSEVLEWLRIQS 90
W ++M +IE GSAV VL S + G+ + K VLGTL+RL+QL KW +V EVL WL+ Q
Sbjct: 43 WEKMMREIEVSGSAVGVLSSRKEDGK-VSKGDVLGTLIRLRQLNKWTMVLEVLLWLKQQD 101
Query: 91 WWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNA 150
WW+F DF ++I AYGK G AE + M + G P+V T+L+EA+ R G + A
Sbjct: 102 WWNFGIHDFNLMIAAYGKLGQPGIAELSFTEMREVGLEPNVACFTSLLEAHARTGNFVRA 161
Query: 151 EAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMM 210
E+I++ M +GP P+ +TYQ+ + +A +F +AE +F L +E + KPD +++++M
Sbjct: 162 ESIYQEMLKTGPAPTEVTYQVYINALCKAERFNDAERIFKCL--DESAEAKPDARLYNLM 219
Query: 211 IYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSKIYDQMQRAGLQPD 270
++ Y KAG + + + LF M GV + VT+NSLM+F+ + MQ A ++PD
Sbjct: 220 LHTYGKAGKFSEQQALFRQMKGAGVPMTVVTFNSLMAFQKTVADAEACLRHMQAAKIKPD 279
Query: 271 VVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFK 330
V++Y LINAY KARR EEA VF EM+ +G+RP+ AYN LLDA+A V+ A ++FK
Sbjct: 280 VITYTGLINAYSKARRVEEAHVVFREMVASGLRPSRIAYNTLLDAYAKCKEVEGAESLFK 339
Query: 331 CMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVN 390
M +DRC PDI SYTT+L+AY N +M+ AE+ +R+KQ G PNV+TYGTL++GY V+
Sbjct: 340 SMGQDRCRPDIRSYTTLLAAYANTGNMKKAERLLKRMKQAGLEPNVVTYGTLMQGYTSVH 399
Query: 391 NLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKN 450
++ M++ ++ ++ GIKPN TIFT ++ +G+ +DF+SA+ W+K+M G P DQ+++
Sbjct: 400 DINAMLQTFEDLQKAGIKPNSTIFTLLVRTFGQQEDFESALSWFKKMLDSGCPADQRSRA 459
Query: 451 ILLSLAKTADERNEANELLGNF 472
L+ +T++++ E E G+
Sbjct: 460 ALMDACQTSEQKQEVLEYFGSL 481
Score = 114 bits (286), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 74/280 (26%), Positives = 133/280 (47%), Gaps = 9/280 (3%)
Query: 207 FHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFET---NYKEVSKIYDQMQ 263
F++MI Y K G A F M E G++ + + SL+ N+ IY +M
Sbjct: 110 FNLMIAAYGKLGQPGIAELSFTEMREVGLEPNVACFTSLLEAHARTGNFVRAESIYQEML 169
Query: 264 RAGLQPDVVSYALLINAYGKARREEEALAVFEEMLD--AGVRPTHKAYNILLDAFAISGM 321
+ G P V+Y + INA KA R +A +F+ LD A +P + YN++L + +G
Sbjct: 170 KTGPAPTEVTYQVYINALCKAERFNDAERIFK-CLDESAEAKPDARLYNLMLHTYGKAGK 228
Query: 322 VDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGT 381
+ + +F+ M+ + ++ ++++ +D AE R ++ P+VITY
Sbjct: 229 FSEQQALFRQMKGAGVPMTVVTFNSLMAFQKTVAD---AEACLRHMQAAKIKPDVITYTG 285
Query: 382 LIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCG 441
LI Y+K +E+ ++ +M +G++P++ + T++DAY K K+ + A +K M
Sbjct: 286 LINAYSKARRVEEAHVVFREMVASGLRPSRIAYNTLLDAYAKCKEVEGAESLFKSMGQDR 345
Query: 442 FPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGI 481
PD ++ LL+ +A LL EP +
Sbjct: 346 CRPDIRSYTTLLAAYANTGNMKKAERLLKRMKQAGLEPNV 385
>gi|302819136|ref|XP_002991239.1| hypothetical protein SELMODRAFT_448344 [Selaginella moellendorffii]
gi|300140950|gb|EFJ07667.1| hypothetical protein SELMODRAFT_448344 [Selaginella moellendorffii]
Length = 561
Score = 355 bits (912), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 164/440 (37%), Positives = 278/440 (63%), Gaps = 1/440 (0%)
Query: 31 WRRLMNQIEEVGSAVAVLRSERTRGQPLPKDLVLGTLVRLKQLKKWNVVSEVLEWLRIQS 90
W R+M ++E+ +A+L+ G + ++ V+GTL R KQ++ W ++ + EWL Q
Sbjct: 90 WERMMLEVEKSPEPLAILKKYAGDGN-ISRESVVGTLTRFKQMQAWKIIIKFTEWLMEQG 148
Query: 91 WWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNA 150
W++FN+ D+ +++ AY K G +K E + M + G ++ +T +E YGR + A
Sbjct: 149 WYNFNQKDYFLVLLAYCKDGQVDKTEGIFQRMAELGVVANIEMYTLQIEGYGRRRSFDKA 208
Query: 151 EAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMM 210
EA+F+R+ ++GP P+A TYQ ++K + EA + + + +F + D +KPD +M+++M
Sbjct: 209 EAVFQRLLTTGPSPTAQTYQTMMKSYSEAGRLDDVQRIFKLVTDSPSPTVKPDARMYNLM 268
Query: 211 IYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSKIYDQMQRAGLQPD 270
I+ Y K G E+A ++ M V + VT+NSL++ + +K+ ++ ++Q A L PD
Sbjct: 269 IHTYGKQGKVEQAMSVYQSMKRERVALTIVTFNSLLACQKTWKDAEDVFRKLQAAKLDPD 328
Query: 271 VVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFK 330
V SY L+NAY KARR E A A F++M+ AG+RPT AYN L++A+A + AR V K
Sbjct: 329 VFSYTALVNAYAKARRAECAHAAFDDMIAAGIRPTQVAYNALINAYAKCKDPEGARAVLK 388
Query: 331 CMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVN 390
M+++ C+P + SYT+++SAYV+ + M AE+ R+K+ PN+ T+ L+ GYA N
Sbjct: 389 QMKQNGCTPTVESYTSLISAYVSVNLMAKAEQTVLRMKEADLQPNLQTFCVLMTGYANGN 448
Query: 391 NLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKN 450
L+ MM ++ M++ G++PN+ ++T +++AYG N DFDSA++WYK+M G+ PD +
Sbjct: 449 KLDNMMRSFETMKLAGLEPNRHVYTVLVNAYGSNDDFDSAIIWYKQMLGTGYKPDPILRT 508
Query: 451 ILLSLAKTADERNEANELLG 470
+LL +AK+ ++ E +ELLG
Sbjct: 509 VLLKIAKSHEQTEEIHELLG 528
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 69/290 (23%), Positives = 140/290 (48%), Gaps = 9/290 (3%)
Query: 203 DQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLM---SFETNYKEVSKIY 259
+QK + +++ Y K G +K +F MAE GV + Y + ++ + ++
Sbjct: 153 NQKDYFLVLLAYCKDGQVDKTEGIFQRMAELGVVANIEMYTLQIEGYGRRRSFDKAEAVF 212
Query: 260 DQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDA---GVRPTHKAYNILLDAF 316
++ G P +Y ++ +Y +A R ++ +F+ + D+ V+P + YN+++ +
Sbjct: 213 QRLLTTGPSPTAQTYQTMMKSYSEAGRLDDVQRIFKLVTDSPSPTVKPDARMYNLMIHTY 272
Query: 317 AISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNV 376
G V+QA +V++ M+R+R + I ++ ++L+ D AE FR+L+ P+V
Sbjct: 273 GKQGKVEQAMSVYQSMKRERVALTIVTFNSLLACQKTWKD---AEDVFRKLQAAKLDPDV 329
Query: 377 ITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKE 436
+Y L+ YAK E +D M GI+P Q + +++AY K KD + A K+
Sbjct: 330 FSYTALVNAYAKARRAECAHAAFDDMIAAGIRPTQVAYNALINAYAKCKDPEGARAVLKQ 389
Query: 437 MESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGINGLSI 486
M+ G P ++ L+S + + +A + + + +P + +
Sbjct: 390 MKQNGCTPTVESYTSLISAYVSVNLMAKAEQTVLRMKEADLQPNLQTFCV 439
>gi|302819015|ref|XP_002991179.1| hypothetical protein SELMODRAFT_448320 [Selaginella moellendorffii]
gi|300141007|gb|EFJ07723.1| hypothetical protein SELMODRAFT_448320 [Selaginella moellendorffii]
Length = 561
Score = 355 bits (912), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 165/440 (37%), Positives = 278/440 (63%), Gaps = 1/440 (0%)
Query: 31 WRRLMNQIEEVGSAVAVLRSERTRGQPLPKDLVLGTLVRLKQLKKWNVVSEVLEWLRIQS 90
W R+M ++E+ +A+L+ G + ++ V+GTL R KQ++ W ++ + EWL Q
Sbjct: 90 WERMMLEVEKSPEPLAILKKYAGDGN-ISRESVVGTLTRFKQMQAWKIIIKFTEWLMEQG 148
Query: 91 WWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNA 150
W++FN+ D+ +++ AY K G +K E + M + G A ++ +T +E YGR + A
Sbjct: 149 WYNFNQKDYFLVLLAYCKDGQVDKTEGIFQRMAELGVAANIEMYTLQIEGYGRRRSFDKA 208
Query: 151 EAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMM 210
EA+F+R+ ++GP P+A TYQ ++K + EA + + + +F + D +KPD +M+++M
Sbjct: 209 EAVFQRLLTTGPSPTAQTYQTMMKSYSEAGRLDDVQRIFKLVTDSPSPTVKPDARMYNLM 268
Query: 211 IYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSKIYDQMQRAGLQPD 270
I+ Y K G E+A ++ M V + VT+NSL++ + +K+ ++ ++Q A L PD
Sbjct: 269 IHTYGKQGKVEQAMSVYQSMKRERVALTIVTFNSLLACQKTWKDAEDVFRKLQAAKLDPD 328
Query: 271 VVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFK 330
V SY L+NAY KARR E A A F++M+ AG+RPT AYN L++A+A + AR V K
Sbjct: 329 VFSYTALVNAYAKARRAECAHAAFDDMIAAGIRPTQVAYNALINAYAKCKDPEGARAVLK 388
Query: 331 CMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVN 390
M+++ C+P + SYT+++SAYV+ + M AE+ R+K+ PN+ T+ L+ GYA N
Sbjct: 389 QMKQNGCTPTVESYTSLISAYVSVNLMAKAEQTVLRMKEADLQPNLQTFCILMTGYANGN 448
Query: 391 NLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKN 450
L+ MM ++ M++ G++PN+ ++T +++AYG N DFDSA++WYK+M G PD +
Sbjct: 449 KLDNMMRSFETMKLAGLEPNRHVYTVLVNAYGSNDDFDSAIIWYKQMLGTGCKPDPILRT 508
Query: 451 ILLSLAKTADERNEANELLG 470
+LL +AK+ ++ E +ELLG
Sbjct: 509 VLLKIAKSHEQTEEIHELLG 528
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 70/290 (24%), Positives = 140/290 (48%), Gaps = 9/290 (3%)
Query: 203 DQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLM---SFETNYKEVSKIY 259
+QK + +++ Y K G +K +F MAE GV + Y + ++ + ++
Sbjct: 153 NQKDYFLVLLAYCKDGQVDKTEGIFQRMAELGVAANIEMYTLQIEGYGRRRSFDKAEAVF 212
Query: 260 DQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDA---GVRPTHKAYNILLDAF 316
++ G P +Y ++ +Y +A R ++ +F+ + D+ V+P + YN+++ +
Sbjct: 213 QRLLTTGPSPTAQTYQTMMKSYSEAGRLDDVQRIFKLVTDSPSPTVKPDARMYNLMIHTY 272
Query: 317 AISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNV 376
G V+QA +V++ M+R+R + I ++ ++L+ D AE FR+L+ P+V
Sbjct: 273 GKQGKVEQAMSVYQSMKRERVALTIVTFNSLLACQKTWKD---AEDVFRKLQAAKLDPDV 329
Query: 377 ITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKE 436
+Y L+ YAK E +D M GI+P Q + +++AY K KD + A K+
Sbjct: 330 FSYTALVNAYAKARRAECAHAAFDDMIAAGIRPTQVAYNALINAYAKCKDPEGARAVLKQ 389
Query: 437 MESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGINGLSI 486
M+ G P ++ L+S + + +A + + + +P + I
Sbjct: 390 MKQNGCTPTVESYTSLISAYVSVNLMAKAEQTVLRMKEADLQPNLQTFCI 439
>gi|168019209|ref|XP_001762137.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162686541|gb|EDQ72929.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 513
Score = 204 bits (520), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 136/478 (28%), Positives = 226/478 (47%), Gaps = 55/478 (11%)
Query: 44 AVAVLRSERTRGQP---------LPKDL-----VLGTLVRLKQLKKWNVVSEVLEWLRIQ 89
A A+ RS T+ P LP+ + ++ T+ ++ +KW + EW+
Sbjct: 35 AAALTRSILTQKSPQDVWDALDALPRCVGSWEDLMETVAEFRRQRKWRSAIVIYEWILQG 94
Query: 90 SWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKN 149
S + + F ML+ AYG+ + +AE M K P+ S LM AY RGG+ +
Sbjct: 95 SMFKPDVGCFNMLMDAYGRTKQWTEAENTFHLMKKFQCLPTETSFNVLMAAYSRGGQLER 154
Query: 150 AEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHM 209
AE + M+ S P +TY L++ ++ ++ AE+VF + + + P F +
Sbjct: 155 AERVLHEMKESNCSPGLVTYNTYLEVLNKSGSWQLAEDVFREM---QNRGVPPAVNTFTL 211
Query: 210 MIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLM---SFETNYKEVSKIYDQMQRAG 266
MI +Y KA KA LF M + S TY +L+ + E N +I+ ++Q G
Sbjct: 212 MINIYGKAHHSAKAEHLFQSMRKALCPPSLFTYTALINAHAREGNCVRAEEIFAELQSVG 271
Query: 267 LQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQAR 326
PD+ +Y L+ AY + A VFE ML+AGV+ H +YNIL+DAF +G++ A+
Sbjct: 272 FVPDIYTYNALLEAYSRGGHPAGAKEVFETMLEAGVKADHVSYNILIDAFGRAGLISDAQ 331
Query: 327 TVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQ-----DGFV-------- 373
++ M++ P + S+ +LSA+V A + AE F RRL+ D F+
Sbjct: 332 AIYDSMKKVGFKPTMKSHILLLSAFVKAGRVTDAENFVRRLESMGVEPDTFMFNSLLGAY 391
Query: 374 ----------------------PNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQ 411
P++IT TLI YA+ +E+ EI++ + G P+
Sbjct: 392 GNSGRMDKMESLYESMQGSVCKPDIITLNTLINVYAQGGYIERAEEIFNSLESKGFTPDV 451
Query: 412 TIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELL 469
+T++M AY K K + V Y++M G PD+ +LLS + ++ E +++
Sbjct: 452 MSWTSLMGAYSKRKLYRKCVSVYQKMLIAGCIPDRATAKVLLSSCRGPEQVKEVTDMI 509
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 73/307 (23%), Positives = 145/307 (47%), Gaps = 5/307 (1%)
Query: 176 FVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGV 235
F K++ A ++ +L + S KPD F+M++ Y + + +A F LM +
Sbjct: 75 FRRQRKWRSAIVIYEWIL--QGSMFKPDVGCFNMLMDAYGRTKQWTEAENTFHLMKKFQC 132
Query: 236 QQSTVTYNSLMSFET---NYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALA 292
+ ++N LM+ + + ++ +M+ + P +V+Y + K+ + A
Sbjct: 133 LPTETSFNVLMAAYSRGGQLERAERVLHEMKESNCSPGLVTYNTYLEVLNKSGSWQLAED 192
Query: 293 VFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYV 352
VF EM + GV P + ++++ + + +A +F+ MR+ C P + +YT +++A+
Sbjct: 193 VFREMQNRGVPPAVNTFTLMINIYGKAHHSAKAEHLFQSMRKALCPPSLFTYTALINAHA 252
Query: 353 NASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQT 412
+ AE+ F L+ GFVP++ TY L++ Y++ + E+++ M G+K +
Sbjct: 253 REGNCVRAEEIFAELQSVGFVPDIYTYNALLEAYSRGGHPAGAKEVFETMLEAGVKADHV 312
Query: 413 IFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNF 472
+ ++DA+G+ A Y M+ GF P K+ +LLS A +A +
Sbjct: 313 SYNILIDAFGRAGLISDAQAIYDSMKKVGFKPTMKSHILLLSAFVKAGRVTDAENFVRRL 372
Query: 473 NHPNNEP 479
EP
Sbjct: 373 ESMGVEP 379
Score = 118 bits (296), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 77/305 (25%), Positives = 150/305 (49%), Gaps = 9/305 (2%)
Query: 99 FLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQ 158
F ++I YGK KAE + M K PS+ ++TAL+ A+ R G AE IF +Q
Sbjct: 209 FTLMINIYGKAHHSAKAEHLFQSMRKALCPPSLFTYTALINAHAREGNCVRAEEIFAELQ 268
Query: 159 SSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAG 218
S G P TY +L+ + A+EVF T+L+ + +K D ++++I + +AG
Sbjct: 269 SVGFVPDIYTYNALLEAYSRGGHPAGAKEVFETMLE---AGVKADHVSYNILIDAFGRAG 325
Query: 219 GYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVS---KIYDQMQRAGLQPDVVSYA 275
A+ ++ M + G + + ++ L+S V+ +++ G++PD +
Sbjct: 326 LISDAQAIYDSMKKVGFKPTMKSHILLLSAFVKAGRVTDAENFVRRLESMGVEPDTFMFN 385
Query: 276 LLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRD 335
L+ AYG + R ++ +++E M + +P N L++ +A G +++A +F +
Sbjct: 386 SLLGAYGNSGRMDKMESLYESMQGSVCKPDIITLNTLINVYAQGGYIERAEEIFNSLESK 445
Query: 336 RCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLI---KGYAKVNNL 392
+PD+ S+T+++ AY ++++ G +P+ T L+ +G +V +
Sbjct: 446 GFTPDVMSWTSLMGAYSKRKLYRKCVSVYQKMLIAGCIPDRATAKVLLSSCRGPEQVKEV 505
Query: 393 EKMME 397
M+E
Sbjct: 506 TDMIE 510
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 48/90 (53%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
LI Y + G +AE++ + + KG+ P V+S T+LM AY + Y+ +++++M +G
Sbjct: 422 LINVYAQGGYIERAEEIFNSLESKGFTPDVMSWTSLMGAYSKRKLYRKCVSVYQKMLIAG 481
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMT 191
P T +++L + KE ++ T
Sbjct: 482 CIPDRATAKVLLSSCRGPEQVKEVTDMIET 511
>gi|168049795|ref|XP_001777347.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162671323|gb|EDQ57877.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 621
Score = 200 bits (508), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 116/435 (26%), Positives = 224/435 (51%), Gaps = 14/435 (3%)
Query: 54 RGQPLPK----DLVLGTLVRLKQLKKWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQ 109
+G P P + +L L + Q ++ ++ E L+ + W + + + LI + G+
Sbjct: 2 KGFPSPNVVTYNSLLNALAKAGQCEEAQLLFEELKAAK----WTPDVVSYSCLINSLGRA 57
Query: 110 GDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTY 169
G + A +V++ M KG P++ ++ L++ G+ G++ A + M+ +G P TY
Sbjct: 58 GKWEAALEVVAEMQAKGCKPNLWTYNTLVDCLGKAGQFDEALRLLAEMRDNGCVPDVRTY 117
Query: 170 QIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFAL 229
++ +A + EA +F + E+ + PD ++ +IY K G +KA +L
Sbjct: 118 NCLISTLGKAGRLSEAFTLFAEM--RERGCV-PDTFTYNSLIYGLGKVGRSQKAMELLEE 174
Query: 230 MAERGVQQSTVTYNSLMSFETNYKEVSK---IYDQMQRAGLQPDVVSYALLINAYGKARR 286
M G +TY+SL++ E K ++ +M+R G +PD +++ L++A GKA R
Sbjct: 175 MERHGCPPDVMTYSSLITGLGKDGETVKAFKLFQEMKRRGRKPDSITFTALMDALGKAGR 234
Query: 287 EEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTT 346
++AL + +EM + GV+P YN L+ F G + +A + M+R+ C PD+ +Y+
Sbjct: 235 VDDALELLDEMKERGVKPGVVTYNALIAGFGKVGDLVEAYNLLDEMKRNGCKPDVVTYSC 294
Query: 347 MLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNG 406
+++ + AS ++ A + ++++++G P+ ITY TLI G K L ++D+M+ G
Sbjct: 295 LITGLIKASQLDEACQVLKKMEKEGCPPDTITYNTLINGLGKAGLLNDAGRLFDRMKSKG 354
Query: 407 IKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEAN 466
P+ ++T++ A GK +SA V ++EMES G PD ++++ A + ++A+
Sbjct: 355 CNPDVVTYSTLITALGKAARVESACVLFEEMESVGIQPDLFTYCSIITVLGKAGQVDDAD 414
Query: 467 ELLGNFNHPNNEPGI 481
L P +
Sbjct: 415 RLFSEMRGKGLSPDV 429
Score = 176 bits (445), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 119/436 (27%), Positives = 199/436 (45%), Gaps = 20/436 (4%)
Query: 30 NWRRLMNQIEEVGSA--VAVLRSERTRGQPLPKDLVLGTLV-RLKQLKKWNVVSEVLEWL 86
+ L+N + + G +L E + P + L+ L + KW EV+ +
Sbjct: 11 TYNSLLNALAKAGQCEEAQLLFEELKAAKWTPDVVSYSCLINSLGRAGKWEAALEVVAEM 70
Query: 87 RIQSW----WDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYG 142
+ + W +N L+ GK G F++A ++L+ M G P V ++ L+ G
Sbjct: 71 QAKGCKPNLWTYN-----TLVDCLGKAGQFDEALRLLAEMRDNGCVPDVRTYNCLISTLG 125
Query: 143 RGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDE-EKSPLK 201
+ GR A +F M+ G P TY ++ + + ++A M LL+E E+
Sbjct: 126 KAGRLSEAFTLFAEMRERGCVPDTFTYNSLIYGLGKVGRSQKA----MELLEEMERHGCP 181
Query: 202 PDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVS---KI 258
PD + +I K G KA KLF M RG + ++T+ +LM V ++
Sbjct: 182 PDVMTYSSLITGLGKDGETVKAFKLFQEMKRRGRKPDSITFTALMDALGKAGRVDDALEL 241
Query: 259 YDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAI 318
D+M+ G++P VV+Y LI +GK EA + +EM G +P Y+ L+
Sbjct: 242 LDEMKERGVKPGVVTYNALIAGFGKVGDLVEAYNLLDEMKRNGCKPDVVTYSCLITGLIK 301
Query: 319 SGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVIT 378
+ +D+A V K M ++ C PD +Y T+++ A + A + F R+K G P+V+T
Sbjct: 302 ASQLDEACQVLKKMEKEGCPPDTITYNTLINGLGKAGLLNDAGRLFDRMKSKGCNPDVVT 361
Query: 379 YGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEME 438
Y TLI K +E ++++M GI+P+ + +I+ GK D A + EM
Sbjct: 362 YSTLITALGKAARVESACVLFEEMESVGIQPDLFTYCSIITVLGKAGQVDDADRLFSEMR 421
Query: 439 SCGFPPDQKAKNILLS 454
G PD N L+
Sbjct: 422 GKGLSPDVITYNAFLN 437
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 105/372 (28%), Positives = 189/372 (50%), Gaps = 8/372 (2%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
LI+ GK G ++A + + M ++G P ++ +L+ G+ GR + A + M+ G
Sbjct: 120 LISTLGKAGRLSEAFTLFAEMRERGCVPDTFTYNSLIYGLGKVGRSQKAMELLEEMERHG 179
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
P +TY L K E + F + ++ KPD F ++ KAG +
Sbjct: 180 CPPDVMTYS---SLITGLGKDGETVKAFKLFQEMKRRGRKPDSITFTALMDALGKAGRVD 236
Query: 222 KARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSKIY---DQMQRAGLQPDVVSYALLI 278
A +L M ERGV+ VTYN+L++ ++ + Y D+M+R G +PDVV+Y+ LI
Sbjct: 237 DALELLDEMKERGVKPGVVTYNALIAGFGKVGDLVEAYNLLDEMKRNGCKPDVVTYSCLI 296
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCS 338
KA + +EA V ++M G P YN L++ +G+++ A +F M+ C+
Sbjct: 297 TGLIKASQLDEACQVLKKMEKEGCPPDTITYNTLINGLGKAGLLNDAGRLFDRMKSKGCN 356
Query: 339 PDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEI 398
PD+ +Y+T+++A A+ +E A F ++ G P++ TY ++I K ++ +
Sbjct: 357 PDVVTYSTLITALGKAARVESACVLFEEMESVGIQPDLFTYCSIITVLGKAGQVDDADRL 416
Query: 399 YDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKN-ILLSLAK 457
+ +MR G+ P+ + +++ G+ F A +++M+ G PD + +LL L+K
Sbjct: 417 FSEMRGKGLSPDVITYNAFLNSLGRGGRFKEARKIFEDMKESGLLPDVATYDALLLGLSK 476
Query: 458 TADERNEANELL 469
T E ++A LL
Sbjct: 477 T-KEVDDACGLL 487
Score = 171 bits (433), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 111/389 (28%), Positives = 183/389 (47%), Gaps = 8/389 (2%)
Query: 97 MDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRR 156
M + LIT GK G+ KA K+ M ++G P ++ TALM+A G+ GR +A +
Sbjct: 185 MTYSSLITGLGKDGETVKAFKLFQEMKRRGRKPDSITFTALMDALGKAGRVDDALELLDE 244
Query: 157 MQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDE-EKSPLKPDQKMFHMMIYMYK 215
M+ G +P +TY ++ F + EA LLDE +++ KPD + +I
Sbjct: 245 MKERGVKPGVVTYNALIAGFGKVGDLVEA----YNLLDEMKRNGCKPDVVTYSCLITGLI 300
Query: 216 KAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETN---YKEVSKIYDQMQRAGLQPDVV 272
KA ++A ++ M + G T+TYN+L++ + +++D+M+ G PDVV
Sbjct: 301 KASQLDEACQVLKKMEKEGCPPDTITYNTLINGLGKAGLLNDAGRLFDRMKSKGCNPDVV 360
Query: 273 SYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCM 332
+Y+ LI A GKA R E A +FEEM G++P Y ++ +G VD A +F M
Sbjct: 361 TYSTLITALGKAARVESACVLFEEMESVGIQPDLFTYCSIITVLGKAGQVDDADRLFSEM 420
Query: 333 RRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNL 392
R SPD+ +Y L++ + A K F +K+ G +P+V TY L+ G +K +
Sbjct: 421 RGKGLSPDVITYNAFLNSLGRGGRFKEARKIFEDMKESGLLPDVATYDALLLGLSKTKEV 480
Query: 393 EKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNIL 452
+ + ++ G + F ++ + D A + S G P + N L
Sbjct: 481 DDACGLLKELIEQGCAFDSLKFDECLEILTSWGNVDEAHELLQFANSKGLWPGASSYNAL 540
Query: 453 LSLAKTADERNEANELLGNFNHPNNEPGI 481
+ A +EA L + +P I
Sbjct: 541 IDALAKAGRVSEAFNTLEDLKEQGGKPDI 569
Score = 154 bits (390), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 100/392 (25%), Positives = 186/392 (47%), Gaps = 8/392 (2%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
LI GK G KA ++L M + G P V+++++L+ G+ G A +F+ M+ G
Sbjct: 155 LIYGLGKVGRSQKAMELLEEMERHGCPPDVMTYSSLITGLGKDGETVKAFKLFQEMKRRG 214
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKS-PLKPDQKMFHMMIYMYKKAGGY 220
+P ++T+ ++ +A + +A E LLDE K +KP ++ +I + K G
Sbjct: 215 RKPDSITFTALMDALGKAGRVDDALE----LLDEMKERGVKPGVVTYNALIAGFGKVGDL 270
Query: 221 EKARKLFALMAERGVQQSTVTYNSLMSF---ETNYKEVSKIYDQMQRAGLQPDVVSYALL 277
+A L M G + VTY+ L++ + E ++ +M++ G PD ++Y L
Sbjct: 271 VEAYNLLDEMKRNGCKPDVVTYSCLITGLIKASQLDEACQVLKKMEKEGCPPDTITYNTL 330
Query: 278 INAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRC 337
IN GKA +A +F+ M G P Y+ L+ A + V+ A +F+ M
Sbjct: 331 INGLGKAGLLNDAGRLFDRMKSKGCNPDVVTYSTLITALGKAARVESACVLFEEMESVGI 390
Query: 338 SPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMME 397
PD+ +Y ++++ A ++ A++ F ++ G P+VITY + + ++ +
Sbjct: 391 QPDLFTYCSIITVLGKAGQVDDADRLFSEMRGKGLSPDVITYNAFLNSLGRGGRFKEARK 450
Query: 398 IYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAK 457
I++ M+ +G+ P+ + ++ K K+ D A KE+ G D + L +
Sbjct: 451 IFEDMKESGLLPDVATYDALLLGLSKTKEVDDACGLLKELIEQGCAFDSLKFDECLEILT 510
Query: 458 TADERNEANELLGNFNHPNNEPGINGLSISVD 489
+ +EA+ELL N PG + + +D
Sbjct: 511 SWGNVDEAHELLQFANSKGLWPGASSYNALID 542
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 92/378 (24%), Positives = 179/378 (47%), Gaps = 6/378 (1%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
+ + F L+ A GK G + A ++L M ++G P VV++ AL+ +G+ G A +
Sbjct: 218 DSITFTALMDALGKAGRVDDALELLDEMKERGVKPGVVTYNALIAGFGKVGDLVEAYNLL 277
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
M+ +G +P +TY ++ ++A++ EA +V + EK PD ++ +I
Sbjct: 278 DEMKRNGCKPDVVTYSCLITGLIKASQLDEACQVLKKM---EKEGCPPDTITYNTLINGL 334
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSLMSF---ETNYKEVSKIYDQMQRAGLQPDV 271
KAG A +LF M +G VTY++L++ + ++++M+ G+QPD+
Sbjct: 335 GKAGLLNDAGRLFDRMKSKGCNPDVVTYSTLITALGKAARVESACVLFEEMESVGIQPDL 394
Query: 272 VSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKC 331
+Y +I GKA + ++A +F EM G+ P YN L++ G +AR +F+
Sbjct: 395 FTYCSIITVLGKAGQVDDADRLFSEMRGKGLSPDVITYNAFLNSLGRGGRFKEARKIFED 454
Query: 332 MRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNN 391
M+ PD+ +Y +L +++ A + L + G + + + ++ N
Sbjct: 455 MKESGLLPDVATYDALLLGLSKTKEVDDACGLLKELIEQGCAFDSLKFDECLEILTSWGN 514
Query: 392 LEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNI 451
+++ E+ G+ P + + ++DA K A ++++ G PD + +
Sbjct: 515 VDEAHELLQFANSKGLWPGASSYNALIDALAKAGRVSEAFNTLEDLKEQGGKPDIVSYSS 574
Query: 452 LLSLAKTADERNEANELL 469
L+S + + A ELL
Sbjct: 575 LISALGQTGQIDTAFELL 592
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 87/345 (25%), Positives = 158/345 (45%), Gaps = 8/345 (2%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
LI +GK GD +A +L M + G P VV+++ L+ + + A + ++M+ G
Sbjct: 260 LIAGFGKVGDLVEAYNLLDEMKRNGCKPDVVTYSCLITGLIKASQLDEACQVLKKMEKEG 319
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSP-LKPDQKMFHMMIYMYKKAGGY 220
P +TY ++ +A +A +F D KS PD + +I KA
Sbjct: 320 CPPDTITYNTLINGLGKAGLLNDAGRLF----DRMKSKGCNPDVVTYSTLITALGKAARV 375
Query: 221 EKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVS---KIYDQMQRAGLQPDVVSYALL 277
E A LF M G+Q TY S+++ +V +++ +M+ GL PDV++Y
Sbjct: 376 ESACVLFEEMESVGIQPDLFTYCSIITVLGKAGQVDDADRLFSEMRGKGLSPDVITYNAF 435
Query: 278 INAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRC 337
+N+ G+ R +EA +FE+M ++G+ P Y+ LL + + VD A + K + C
Sbjct: 436 LNSLGRGGRFKEARKIFEDMKESGLLPDVATYDALLLGLSKTKEVDDACGLLKELIEQGC 495
Query: 338 SPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMME 397
+ D + L + +++ A + + G P +Y LI AK + +
Sbjct: 496 AFDSLKFDECLEILTSWGNVDEAHELLQFANSKGLWPGASSYNALIDALAKAGRVSEAFN 555
Query: 398 IYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGF 442
+ ++ G KP+ +++++ A G+ D+A +EM G
Sbjct: 556 TLEDLKEQGGKPDIVSYSSLISALGQTGQIDTAFELLEEMSKRGL 600
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 79/325 (24%), Positives = 157/325 (48%), Gaps = 6/325 (1%)
Query: 97 MDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRR 156
+ + LIT K ++A +VL M K+G P +++ L+ G+ G +A +F R
Sbjct: 290 VTYSCLITGLIKASQLDEACQVLKKMEKEGCPPDTITYNTLINGLGKAGLLNDAGRLFDR 349
Query: 157 MQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKK 216
M+S G P +TY ++ +A + + A +F + E ++PD + +I + K
Sbjct: 350 MKSKGCNPDVVTYSTLITALGKAARVESACVLFEEM---ESVGIQPDLFTYCSIITVLGK 406
Query: 217 AGGYEKARKLFALMAERGVQQSTVTYNSLMSF---ETNYKEVSKIYDQMQRAGLQPDVVS 273
AG + A +LF+ M +G+ +TYN+ ++ +KE KI++ M+ +GL PDV +
Sbjct: 407 AGQVDDADRLFSEMRGKGLSPDVITYNAFLNSLGRGGRFKEARKIFEDMKESGLLPDVAT 466
Query: 274 YALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMR 333
Y L+ K + ++A + +E+++ G ++ L+ G VD+A + +
Sbjct: 467 YDALLLGLSKTKEVDDACGLLKELIEQGCAFDSLKFDECLEILTSWGNVDEAHELLQFAN 526
Query: 334 RDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLE 393
P SY ++ A A + A LK+ G P++++Y +LI + ++
Sbjct: 527 SKGLWPGASSYNALIDALAKAGRVSEAFNTLEDLKEQGGKPDIVSYSSLISALGQTGQID 586
Query: 394 KMMEIYDKMRVNGIKPNQTIFTTIM 418
E+ ++M G+K + ++ ++
Sbjct: 587 TAFELLEEMSKRGLKLSPRSYSNLV 611
Score = 45.1 bits (105), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 23/102 (22%), Positives = 46/102 (45%)
Query: 88 IQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRY 147
I+ F+ + F + G+ ++A ++L F N KG P S+ AL++A + GR
Sbjct: 491 IEQGCAFDSLKFDECLEILTSWGNVDEAHELLQFANSKGLWPGASSYNALIDALAKAGRV 550
Query: 148 KNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVF 189
A ++ G +P ++Y ++ + + A E+
Sbjct: 551 SEAFNTLEDLKEQGGKPDIVSYSSLISALGQTGQIDTAFELL 592
>gi|224145304|ref|XP_002336216.1| predicted protein [Populus trichocarpa]
gi|222832672|gb|EEE71149.1| predicted protein [Populus trichocarpa]
Length = 616
Score = 195 bits (496), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 120/434 (27%), Positives = 210/434 (48%), Gaps = 36/434 (8%)
Query: 72 QLKKWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSV 131
QL++ ++ VL + I+ + F LI K G F +A ++ M +GY P V
Sbjct: 169 QLQRVDLGFSVLAKI-IKLGLQLTIVTFNTLINGLCKVGKFGQAVELFDDMVARGYQPDV 227
Query: 132 VSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMT 191
++T ++ + G A +FR+M +G +P +TY I+ + + EA ++F
Sbjct: 228 HTYTTIINGLCKIGETVAAAGLFRKMGEAGCQPDVVTYSTIIDSLCKDRRVNEALDIFSY 287
Query: 192 LLDEEKSP--------------------------------LKPDQKMFHMMIYMYKKAGG 219
+ + SP + P+ F ++I ++ K G
Sbjct: 288 MKAKGISPNIFTYNSLIQGLCNFSRWREASAMLNEMMSLNIMPNIVTFSLLINIFCKEGN 347
Query: 220 YEKARKLFALMAERGVQQSTVTYNSLM---SFETNYKEVSKIYDQMQRAGLQPDVVSYAL 276
+AR + M E GV+ + VTY+SLM S + E K++D M G +PDV SY +
Sbjct: 348 VFEARGVLKTMTEMGVEPNVVTYSSLMNGYSLQAEVVEARKLFDVMITKGCKPDVFSYNI 407
Query: 277 LINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDR 336
LIN Y KA+R EA +F EM+ G+ P +YN L+D G + +A +FK M +
Sbjct: 408 LINGYCKAKRIGEAKQLFNEMIHQGLTPDIVSYNTLIDGLCQLGRLREAHDLFKNMLTNG 467
Query: 337 CSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMM 396
PD+C+Y+ +L + + A + FR ++ PN++ Y LI K NL++
Sbjct: 468 NLPDLCTYSILLDGFCKQGYLAKAFRLFRAMQSTYLKPNMVMYNILIDAMCKSRNLKEAR 527
Query: 397 EIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLA 456
+++ ++ V G++PN I+TTI++ K D A+ ++ ME G PP++ + N+++
Sbjct: 528 KLFSELFVQGLQPNVQIYTTIINGLCKEGLLDEALEAFRNMEEDGCPPNEFSYNVIIRGF 587
Query: 457 KTADERNEANELLG 470
+ + A +L+G
Sbjct: 588 LQHKDESRAVQLIG 601
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 96/347 (27%), Positives = 171/347 (49%), Gaps = 6/347 (1%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
+I + K N+A + S+M KG +P++ ++ +L++ R++ A A+ M S
Sbjct: 268 IIDSLCKDRRVNEALDIFSYMKAKGISPNIFTYNSLIQGLCNFSRWREASAMLNEMMSLN 327
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
P+ +T+ +++ +F + EA V T+ + ++P+ + ++ Y
Sbjct: 328 IMPNIVTFSLLINIFCKEGNVFEARGVLKTM---TEMGVEPNVVTYSSLMNGYSLQAEVV 384
Query: 222 KARKLFALMAERGVQQSTVTYNSLMSFETNYK---EVSKIYDQMQRAGLQPDVVSYALLI 278
+ARKLF +M +G + +YN L++ K E +++++M GL PD+VSY LI
Sbjct: 385 EARKLFDVMITKGCKPDVFSYNILINGYCKAKRIGEAKQLFNEMIHQGLTPDIVSYNTLI 444
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCS 338
+ + R EA +F+ ML G P Y+ILLD F G + +A +F+ M+
Sbjct: 445 DGLCQLGRLREAHDLFKNMLTNGNLPDLCTYSILLDGFCKQGYLAKAFRLFRAMQSTYLK 504
Query: 339 PDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEI 398
P++ Y ++ A + +++ A K F L G PNV Y T+I G K L++ +E
Sbjct: 505 PNMVMYNILIDAMCKSRNLKEARKLFSELFVQGLQPNVQIYTTIINGLCKEGLLDEALEA 564
Query: 399 YDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPD 445
+ M +G PN+ + I+ + ++KD AV EM GF D
Sbjct: 565 FRNMEEDGCPPNEFSYNVIIRGFLQHKDESRAVQLIGEMREKGFVAD 611
Score = 128 bits (322), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 83/324 (25%), Positives = 157/324 (48%), Gaps = 8/324 (2%)
Query: 59 PKDLVLGTLVR-LKQLKKWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEK 117
P +L++ L +W S +L + + N + F +LI + K+G+ +A
Sbjct: 295 PNIFTYNSLIQGLCNFSRWREASAMLNEMMSLNIMP-NIVTFSLLINIFCKEGNVFEARG 353
Query: 118 VLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFV 177
VL M + G P+VV++++LM Y A +F M + G +P +Y I++ +
Sbjct: 354 VLKTMTEMGVEPNVVTYSSLMNGYSLQAEVVEARKLFDVMITKGCKPDVFSYNILINGYC 413
Query: 178 EANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQ 237
+A + EA+++F ++ + L PD ++ +I + G +A LF M G
Sbjct: 414 KAKRIGEAKQLFNEMIHQ---GLTPDIVSYNTLIDGLCQLGRLREAHDLFKNMLTNGNLP 470
Query: 238 STVTYNSLMSFETNYKEVSK---IYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVF 294
TY+ L+ ++K ++ MQ L+P++V Y +LI+A K+R +EA +F
Sbjct: 471 DLCTYSILLDGFCKQGYLAKAFRLFRAMQSTYLKPNMVMYNILIDAMCKSRNLKEARKLF 530
Query: 295 EEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNA 354
E+ G++P + Y +++ G++D+A F+ M D C P+ SY ++ ++
Sbjct: 531 SELFVQGLQPNVQIYTTIINGLCKEGLLDEALEAFRNMEEDGCPPNEFSYNVIIRGFLQH 590
Query: 355 SDMEGAEKFFRRLKQDGFVPNVIT 378
D A + +++ GFV +V T
Sbjct: 591 KDESRAVQLIGEMREKGFVADVAT 614
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 89/365 (24%), Positives = 165/365 (45%), Gaps = 7/365 (1%)
Query: 129 PSVVSHTALMEAYGRGGRYKNAE-AIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEE 187
P ++ L+ A + Y +A ++ ++M+ +G P T +++ F + +
Sbjct: 119 PCIIQFNKLLSAIVKMRHYHDAVISLSKQMELAGLSPDTYTLHMLINCFFQLQRVDLGFS 178
Query: 188 VFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMS 247
V ++ K L+ F+ +I K G + +A +LF M RG Q TY ++++
Sbjct: 179 VLAKII---KLGLQLTIVTFNTLINGLCKVGKFGQAVELFDDMVARGYQPDVHTYTTIIN 235
Query: 248 FETNYKEV---SKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRP 304
E + ++ +M AG QPDVV+Y+ +I++ K RR EAL +F M G+ P
Sbjct: 236 GLCKIGETVAAAGLFRKMGEAGCQPDVVTYSTIIDSLCKDRRVNEALDIFSYMKAKGISP 295
Query: 305 THKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFF 364
YN L+ +A + M P+I +++ +++ + ++ A
Sbjct: 296 NIFTYNSLIQGLCNFSRWREASAMLNEMMSLNIMPNIVTFSLLINIFCKEGNVFEARGVL 355
Query: 365 RRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKN 424
+ + + G PNV+TY +L+ GY+ + + +++D M G KP+ + +++ Y K
Sbjct: 356 KTMTEMGVEPNVVTYSSLMNGYSLQAEVVEARKLFDVMITKGCKPDVFSYNILINGYCKA 415
Query: 425 KDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGINGL 484
K A + EM G PD + N L+ EA++L N N P +
Sbjct: 416 KRIGEAKQLFNEMIHQGLTPDIVSYNTLIDGLCQLGRLREAHDLFKNMLTNGNLPDLCTY 475
Query: 485 SISVD 489
SI +D
Sbjct: 476 SILLD 480
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 84/344 (24%), Positives = 154/344 (44%), Gaps = 5/344 (1%)
Query: 149 NAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFH 208
+A A F M PRP + + +L V+ + +A V E + L PD H
Sbjct: 104 DALAYFNHMLHRKPRPCIIQFNKLLSAIVKMRHYHDA--VISLSKQMELAGLSPDTYTLH 161
Query: 209 MMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETN---YKEVSKIYDQMQRA 265
M+I + + + + A + + G+Q + VT+N+L++ + + +++D M
Sbjct: 162 MLINCFFQLQRVDLGFSVLAKIIKLGLQLTIVTFNTLINGLCKVGKFGQAVELFDDMVAR 221
Query: 266 GLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQA 325
G QPDV +Y +IN K A +F +M +AG +P Y+ ++D+ V++A
Sbjct: 222 GYQPDVHTYTTIINGLCKIGETVAAAGLFRKMGEAGCQPDVVTYSTIIDSLCKDRRVNEA 281
Query: 326 RTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKG 385
+F M+ SP+I +Y +++ N S A + +PN++T+ LI
Sbjct: 282 LDIFSYMKAKGISPNIFTYNSLIQGLCNFSRWREASAMLNEMMSLNIMPNIVTFSLLINI 341
Query: 386 YAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPD 445
+ K N+ + + M G++PN ++++M+ Y + A + M + G PD
Sbjct: 342 FCKEGNVFEARGVLKTMTEMGVEPNVVTYSSLMNGYSLQAEVVEARKLFDVMITKGCKPD 401
Query: 446 QKAKNILLSLAKTADERNEANELLGNFNHPNNEPGINGLSISVD 489
+ NIL++ A EA +L H P I + +D
Sbjct: 402 VFSYNILINGYCKAKRIGEAKQLFNEMIHQGLTPDIVSYNTLID 445
>gi|168004269|ref|XP_001754834.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162693938|gb|EDQ80288.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 504
Score = 192 bits (488), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 126/454 (27%), Positives = 213/454 (46%), Gaps = 50/454 (11%)
Query: 63 VLGTLVRLKQLKKWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFM 122
++ + L++L+ W V +LEW+ + + + F MLI AYGK + +AEK M
Sbjct: 50 IMENVAELRRLRNWRSVILILEWILQGTMFKPDVGCFNMLIDAYGKSKQWREAEKTFHLM 109
Query: 123 NKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSAL---------TYQIIL 173
P+ S L+ AY RG + + AE +F M+ S P + TY L
Sbjct: 110 KDFQCLPTETSFNVLLAAYSRGVQLEKAEKLFHEMKESNYSPGTVEWMIFSGIATYNTYL 169
Query: 174 KLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAER 233
++ ++ + +AE+ F D +K + P F +MI +Y KA +KA LF M +
Sbjct: 170 EVLGKSGRLSQAEDTFR---DMQKQGILPAVNTFTIMINIYGKAYYSDKADDLFRSMRKA 226
Query: 234 GVQQSTVTYNSLM---SFETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEA 290
+ TY +LM + E N +I+ ++Q G PDV +Y L+ AY + A
Sbjct: 227 LCPPNLYTYTALMNAHAREGNCVRAEEIFAELQSVGFIPDVYTYNALLEAYSRGEHPTGA 286
Query: 291 LAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSA 350
VF+ M++AGVRP +YNIL+DAF +G+ A+ V+ M+ P + S+ +LS+
Sbjct: 287 KEVFQAMVEAGVRPDQVSYNILIDAFGRAGLTADAQAVYDSMKEAGFKPTMKSHMLLLSS 346
Query: 351 YVNASDMEGAEKFFRRL-----KQDGFV------------------------------PN 375
Y A + AE+ R + K D F+ P+
Sbjct: 347 YAKAGKVTEAERLVREIENSGVKPDTFMFNSLLSAYGNSGRIDEMESLLESMVSSVAKPD 406
Query: 376 VITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYK 435
+ T TLI YA+ +EK E+++ + G+ P+ +T++M AY + K F V ++
Sbjct: 407 ISTLNTLINAYAQGGYIEKAEEVFNSLESKGLTPDVMSWTSLMGAYAQRKLFRKCVSIFQ 466
Query: 436 EMESCGFPPDQKAKNILLSLAKTADERNEANELL 469
+M G PD+ + LS ++ ++ E +++
Sbjct: 467 KMVKAGCIPDRATAKVFLSSCRSPEQVKEVTDMI 500
Score = 131 bits (330), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 80/325 (24%), Positives = 156/325 (48%), Gaps = 13/325 (4%)
Query: 168 TYQIILKLFVEANKFKEAEEVFMTL-LDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKL 226
T++ I++ E + + V + L + + KPD F+M+I Y K+ + +A K
Sbjct: 46 TWEAIMENVAELRRLRNWRSVILILEWILQGTMFKPDVGCFNMLIDAYGKSKQWREAEKT 105
Query: 227 FALMAERGVQQSTVTYNSLM---SFETNYKEVSKIYDQMQRAGLQPDVV---------SY 274
F LM + + ++N L+ S ++ K++ +M+ + P V +Y
Sbjct: 106 FHLMKDFQCLPTETSFNVLLAAYSRGVQLEKAEKLFHEMKESNYSPGTVEWMIFSGIATY 165
Query: 275 ALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRR 334
+ GK+ R +A F +M G+ P + I+++ + + D+A +F+ MR+
Sbjct: 166 NTYLEVLGKSGRLSQAEDTFRDMQKQGILPAVNTFTIMINIYGKAYYSDKADDLFRSMRK 225
Query: 335 DRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEK 394
C P++ +YT +++A+ + AE+ F L+ GF+P+V TY L++ Y++ +
Sbjct: 226 ALCPPNLYTYTALMNAHAREGNCVRAEEIFAELQSVGFIPDVYTYNALLEAYSRGEHPTG 285
Query: 395 MMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLS 454
E++ M G++P+Q + ++DA+G+ A Y M+ GF P K+ +LLS
Sbjct: 286 AKEVFQAMVEAGVRPDQVSYNILIDAFGRAGLTADAQAVYDSMKEAGFKPTMKSHMLLLS 345
Query: 455 LAKTADERNEANELLGNFNHPNNEP 479
A + EA L+ + +P
Sbjct: 346 SYAKAGKVTEAERLVREIENSGVKP 370
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 76/308 (24%), Positives = 159/308 (51%), Gaps = 6/308 (1%)
Query: 99 FLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQ 158
F ++I YGK +KA+ + M K P++ ++TALM A+ R G AE IF +Q
Sbjct: 200 FTIMINIYGKAYYSDKADDLFRSMRKALCPPNLYTYTALMNAHAREGNCVRAEEIFAELQ 259
Query: 159 SSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAG 218
S G P TY +L+ + A+EVF +++ + ++PDQ ++++I + +AG
Sbjct: 260 SVGFIPDVYTYNALLEAYSRGEHPTGAKEVFQAMVE---AGVRPDQVSYNILIDAFGRAG 316
Query: 219 GYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVS---KIYDQMQRAGLQPDVVSYA 275
A+ ++ M E G + + ++ L+S +V+ ++ +++ +G++PD +
Sbjct: 317 LTADAQAVYDSMKEAGFKPTMKSHMLLLSSYAKAGKVTEAERLVREIENSGVKPDTFMFN 376
Query: 276 LLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRD 335
L++AYG + R +E ++ E M+ + +P N L++A+A G +++A VF +
Sbjct: 377 SLLSAYGNSGRIDEMESLLESMVSSVAKPDISTLNTLINAYAQGGYIEKAEEVFNSLESK 436
Query: 336 RCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKM 395
+PD+ S+T+++ AY F+++ + G +P+ T + ++++
Sbjct: 437 GLTPDVMSWTSLMGAYAQRKLFRKCVSIFQKMVKAGCIPDRATAKVFLSSCRSPEQVKEV 496
Query: 396 MEIYDKMR 403
++ ++ R
Sbjct: 497 TDMIERHR 504
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 91/370 (24%), Positives = 165/370 (44%), Gaps = 19/370 (5%)
Query: 136 ALMEAYGRGGRYKNAEAIFRRM----QSSGPRPSALTYQIILKLFVEANKFKEAEEVFMT 191
A+ME R +N ++ + Q + +P + +++ + ++ +++EAE+ F
Sbjct: 49 AIMENVAELRRLRNWRSVILILEWILQGTMFKPDVGCFNMLIDAYGKSKQWREAEKTFHL 108
Query: 192 LLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTV---------TY 242
+ D + P + F++++ Y + EKA KLF M E TV TY
Sbjct: 109 MKDFQ---CLPTETSFNVLLAAYSRGVQLEKAEKLFHEMKESNYSPGTVEWMIFSGIATY 165
Query: 243 NSLMSFETNYKEVSKIYDQ---MQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLD 299
N+ + +S+ D MQ+ G+ P V ++ ++IN YGKA ++A +F M
Sbjct: 166 NTYLEVLGKSGRLSQAEDTFRDMQKQGILPAVNTFTIMINIYGKAYYSDKADDLFRSMRK 225
Query: 300 AGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEG 359
A P Y L++A A G +A +F ++ PD+ +Y +L AY G
Sbjct: 226 ALCPPNLYTYTALMNAHAREGNCVRAEEIFAELQSVGFIPDVYTYNALLEAYSRGEHPTG 285
Query: 360 AEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMD 419
A++ F+ + + G P+ ++Y LI + + +YD M+ G KP ++
Sbjct: 286 AKEVFQAMVEAGVRPDQVSYNILIDAFGRAGLTADAQAVYDSMKEAGFKPTMKSHMLLLS 345
Query: 420 AYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEP 479
+Y K A +E+E+ G PD N LLS + +E LL + +P
Sbjct: 346 SYAKAGKVTEAERLVREIENSGVKPDTFMFNSLLSAYGNSGRIDEMESLLESMVSSVAKP 405
Query: 480 GINGLSISVD 489
I+ L+ ++
Sbjct: 406 DISTLNTLIN 415
>gi|168034142|ref|XP_001769572.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162679114|gb|EDQ65565.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 871
Score = 191 bits (486), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 105/357 (29%), Positives = 194/357 (54%), Gaps = 7/357 (1%)
Query: 101 MLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSS 160
++I+ G+ G A V + K G+ +V +++A++ AYGR GR + A +F+ M+ +
Sbjct: 204 IMISTLGRLGKVEIALDVFNRAQKAGFGNNVYAYSAMVSAYGRSGRCREALKVFQAMKKA 263
Query: 161 GPRPSALTYQIILKLFVEAN-KFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGG 219
G +P+ +TY I+ + K+A ++F + +K ++PD+ F+ +I + +
Sbjct: 264 GCKPNLITYNTIIDACGKGGVDLKKALDIFEEM---QKEGVEPDRITFNSLIAVCSRGSL 320
Query: 220 YEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEV---SKIYDQMQRAGLQPDVVSYAL 276
+E ++++FA M RG++Q TYN+L+ ++ + I M+ + P+VV+Y+
Sbjct: 321 WEDSQRVFAEMQRRGIEQDIFTYNTLIDAVCKGGQMELAASIMSSMRLKNISPNVVTYST 380
Query: 277 LINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDR 336
+I+ YGK EEA+ ++ +M ++GVRP +YN L+D +A G D A T K M R
Sbjct: 381 MIDGYGKLGCFEEAIGLYHDMKESGVRPDRVSYNTLIDIYAKLGRFDDALTACKDMERVG 440
Query: 337 CSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMM 396
D+ +Y ++ AY + A F ++K +G VPNV+TY LI Y+K +
Sbjct: 441 LKADVVTYNALIDAYGKQGKYKDAAGLFDKMKAEGLVPNVLTYSALIDAYSKAGMHQDAT 500
Query: 397 EIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILL 453
I+ + + G+KP+ ++++++D+ K + AVV +EM G P+ N L+
Sbjct: 501 SIFVEFKRAGLKPDVVLYSSLIDSCCKCGLVEDAVVLLQEMTQAGIQPNIVTYNSLI 557
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 92/315 (29%), Positives = 167/315 (53%), Gaps = 19/315 (6%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
LI A K G A ++S M K +P+VV+++ +++ YG+ G ++ A ++ M+ SG
Sbjct: 346 LIDAVCKGGQMELAASIMSSMRLKNISPNVVTYSTMIDGYGKLGCFEEAIGLYHDMKESG 405
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
RP ++Y ++ ++ + +F +A D E+ LK D ++ +I Y K G Y+
Sbjct: 406 VRPDRVSYNTLIDIYAKLGRFDDA---LTACKDMERVGLKADVVTYNALIDAYGKQGKYK 462
Query: 222 KARKLFALMAERGVQQSTVTYNSLM---SFETNYKEVSKIYDQMQRAGLQPDVVSYALLI 278
A LF M G+ + +TY++L+ S +++ + I+ + +RAGL+PDVV Y+ LI
Sbjct: 463 DAAGLFDKMKAEGLVPNVLTYSALIDAYSKAGMHQDATSIFVEFKRAGLKPDVVLYSSLI 522
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMR----- 333
++ K E+A+ + +EM AG++P YN L+DA+ +G VD M
Sbjct: 523 DSCCKCGLVEDAVVLLQEMTQAGIQPNIVTYNSLIDAYGRNGQVDNVEAAKGNMPINVFN 582
Query: 334 --RDRCSPDICSYTTMLSAYVNASDMEG---AEKFFRRLKQDGFVPNVITYGTLIKGYAK 388
DR + IC L++ NA+D G A F ++Q G PNV+T+ ++ ++
Sbjct: 583 KVGDRSTEIICK---TLTSQQNANDHTGVLAAVSVFHEMQQFGLKPNVVTFSAILNACSR 639
Query: 389 VNNLEKMMEIYDKMR 403
++L++ + ++MR
Sbjct: 640 CSSLQEASVLLEQMR 654
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 95/390 (24%), Positives = 184/390 (47%), Gaps = 9/390 (2%)
Query: 98 DFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTA--LMEAYGRGGRYKNAEAIFR 155
DF L+ G +G++ +A + +M ++G+ S S A ++ GR G+ + A +F
Sbjct: 164 DFPYLLRELGNRGEWERALQGYEWMVQQGHLRSEWSKLASIMISTLGRLGKVEIALDVFN 223
Query: 156 RMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYK 215
R Q +G + Y ++ + + + +EA +VF + +K+ KP+ ++ +I
Sbjct: 224 RAQKAGFGNNVYAYSAMVSAYGRSGRCREALKVFQAM---KKAGCKPNLITYNTIIDACG 280
Query: 216 KAG-GYEKARKLFALMAERGVQQSTVTYNSLMSFETN---YKEVSKIYDQMQRAGLQPDV 271
K G +KA +F M + GV+ +T+NSL++ + +++ +++ +MQR G++ D+
Sbjct: 281 KGGVDLKKALDIFEEMQKEGVEPDRITFNSLIAVCSRGSLWEDSQRVFAEMQRRGIEQDI 340
Query: 272 VSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKC 331
+Y LI+A K + E A ++ M + P Y+ ++D + G ++A ++
Sbjct: 341 FTYNTLIDAVCKGGQMELAASIMSSMRLKNISPNVVTYSTMIDGYGKLGCFEEAIGLYHD 400
Query: 332 MRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNN 391
M+ PD SY T++ Y + A + +++ G +V+TY LI Y K
Sbjct: 401 MKESGVRPDRVSYNTLIDIYAKLGRFDDALTACKDMERVGLKADVVTYNALIDAYGKQGK 460
Query: 392 LEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNI 451
+ ++DKM+ G+ PN ++ ++DAY K A + E + G PD +
Sbjct: 461 YKDAAGLFDKMKAEGLVPNVLTYSALIDAYSKAGMHQDATSIFVEFKRAGLKPDVVLYSS 520
Query: 452 LLSLAKTADERNEANELLGNFNHPNNEPGI 481
L+ +A LL +P I
Sbjct: 521 LIDSCCKCGLVEDAVVLLQEMTQAGIQPNI 550
>gi|168059281|ref|XP_001781632.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162666946|gb|EDQ53588.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 871
Score = 191 bits (484), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 115/411 (27%), Positives = 214/411 (52%), Gaps = 13/411 (3%)
Query: 101 MLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSS 160
++I+ G+ G A V + K G+ +V +++A++ AYGR GR + A +F+ M+ +
Sbjct: 205 IMISTLGRLGKVEIALDVFNRAQKAGFGNNVYAYSAMVSAYGRSGRCREALKVFQAMKKA 264
Query: 161 GPRPSALTYQIILKLFVEAN-KFKEAEEVFMTLLDE-EKSPLKPDQKMFHMMIYMYKKAG 218
G +P+ +TY I+ + K+A ++F DE +K ++PD+ F+ +I + + G
Sbjct: 265 GCKPNLITYNTIIDACGKGGVDLKQALDIF----DEMQKEGVEPDRITFNSLIAVCSRGG 320
Query: 219 GYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEV---SKIYDQMQRAGLQPDVVSYA 275
+E ++++FA M RG++Q T+N+L+ ++ + I M+ + P+VV+Y+
Sbjct: 321 LWEDSQRVFAEMQRRGIEQDIFTFNTLIDAVCKGGQMELAASIMTTMRGKNISPNVVTYS 380
Query: 276 LLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRD 335
+I+ YGK EEA++++ +M ++GVRP +YN L+D +A G D A K M R
Sbjct: 381 TMIDGYGKLGCFEEAISLYHDMKESGVRPDRVSYNTLIDIYAKLGRFDDALIACKDMERV 440
Query: 336 RCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKM 395
D+ +Y ++ AY + A F ++K +G VPNV+TY LI Y+K + +
Sbjct: 441 GLKADVVTYNALIDAYGKQGKYKDAACLFDKMKGEGLVPNVLTYSALIDSYSKAGMHQDV 500
Query: 396 MEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSL 455
++ + + G+KP+ ++++++D+ K + AVV +EM G P+ N SL
Sbjct: 501 SNVFTEFKRAGLKPDVVLYSSLIDSCCKCGLVEDAVVLLQEMTQAGIQPNIVTYN---SL 557
Query: 456 AKTADERNEANELLG-NFNHPNNEPGINGLSISVDEEDDDDDDDEDDDDNI 505
+A++L N PN+ I S+ V + + D +
Sbjct: 558 IDAYGRYGQADKLEAVKANMPNSVQKIGERSMEVVRKPPPSQQNASDHTGV 608
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 92/320 (28%), Positives = 166/320 (51%), Gaps = 24/320 (7%)
Query: 99 FLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQ 158
F LI A K G A +++ M K +P+VV+++ +++ YG+ G ++ A +++ M+
Sbjct: 344 FNTLIDAVCKGGQMELAASIMTTMRGKNISPNVVTYSTMIDGYGKLGCFEEAISLYHDMK 403
Query: 159 SSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAG 218
SG RP ++Y ++ ++ + +F +A + D E+ LK D ++ +I Y K G
Sbjct: 404 ESGVRPDRVSYNTLIDIYAKLGRFDDA---LIACKDMERVGLKADVVTYNALIDAYGKQG 460
Query: 219 GYEKARKLFALMAERGVQQSTVTYNSLM---SFETNYKEVSKIYDQMQRAGLQPDVVSYA 275
Y+ A LF M G+ + +TY++L+ S +++VS ++ + +RAGL+PDVV Y+
Sbjct: 461 KYKDAACLFDKMKGEGLVPNVLTYSALIDSYSKAGMHQDVSNVFTEFKRAGLKPDVVLYS 520
Query: 276 LLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRD 335
LI++ K E+A+ + +EM AG++P YN L+DA+ G D+ V M
Sbjct: 521 SLIDSCCKCGLVEDAVVLLQEMTQAGIQPNIVTYNSLIDAYGRYGQADKLEAVKANM--- 577
Query: 336 RCSPDICSYTTMLSAYV---------NASDMEG---AEKFFRRLKQDGFVPNVITYGTLI 383
P+ S V NASD G A F ++Q G PNV+T+ ++
Sbjct: 578 ---PNSVQKIGERSMEVVRKPPPSQQNASDHTGVLAAVSVFHEMQQFGLKPNVVTFSAIL 634
Query: 384 KGYAKVNNLEKMMEIYDKMR 403
++ +L++ + ++MR
Sbjct: 635 NACSRCASLQEASVLLEQMR 654
>gi|224145829|ref|XP_002325779.1| predicted protein [Populus trichocarpa]
gi|222862654|gb|EEF00161.1| predicted protein [Populus trichocarpa]
Length = 586
Score = 191 bits (484), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 108/373 (28%), Positives = 198/373 (53%), Gaps = 8/373 (2%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
+I K G+ A ++ M + G P VV+++ L+++ + A IF M++ G
Sbjct: 202 IINGLCKMGETAAAAGLIKKMGEVGCQPDVVTYSTLIDSLCKDRLVNEALDIFSYMKAKG 261
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSP-LKPDQKMFHMMIYMYKKAGGY 220
P+ ++Y +++ +++KEA +L+E S + PD F ++I ++ K G
Sbjct: 262 ISPTVVSYTSLIQGLCSFSRWKEAS----AMLNEMTSLNIMPDIVTFSLLIDIFCKEGNV 317
Query: 221 EKARKLFALMAERGVQQSTVTYNSLM---SFETNYKEVSKIYDQMQRAGLQPDVVSYALL 277
+A+ + M E GV+ + +TYNSLM S + E K++D M G +PDV SY++L
Sbjct: 318 LEAQGVLKTMTEMGVEPNVITYNSLMHGYSLQMEVVEARKLFDVMITRGCKPDVFSYSIL 377
Query: 278 INAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRC 337
IN Y +R +EA +F EM+ G+ P +Y L+ AF G + +AR +FK M +
Sbjct: 378 INGYCMVKRIDEAKQLFNEMIHQGLTPNTVSYTTLIHAFCQLGKLREARELFKDMHTNGY 437
Query: 338 SPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMME 397
PD+C+Y+ +L + + A + FR ++ PN++ Y LI K NL +
Sbjct: 438 LPDLCTYSVLLEGFCKQGYLGKAFRLFRAMQGTYLKPNLVMYTILIDSMCKSGNLNHARK 497
Query: 398 IYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAK 457
++ ++ V+G++P+ I+TTI++ K D A+ +++ME G PP++ + N+++
Sbjct: 498 LFSELFVHGLQPDVQIYTTIINGLCKEGLLDEALEAFRKMEEDGCPPNEFSYNVIIRGFL 557
Query: 458 TADERNEANELLG 470
+ + A +L+G
Sbjct: 558 QHKDESRAVQLIG 570
Score = 162 bits (411), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 98/348 (28%), Positives = 178/348 (51%), Gaps = 6/348 (1%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
LI + K N+A + S+M KG +P+VVS+T+L++ R+K A A+ M S
Sbjct: 237 LIDSLCKDRLVNEALDIFSYMKAKGISPTVVSYTSLIQGLCSFSRWKEASAMLNEMTSLN 296
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
P +T+ +++ +F + EA+ V T+ + ++P+ ++ +++ Y
Sbjct: 297 IMPDIVTFSLLIDIFCKEGNVLEAQGVLKTM---TEMGVEPNVITYNSLMHGYSLQMEVV 353
Query: 222 KARKLFALMAERGVQQSTVTYNSLMSFETNYK---EVSKIYDQMQRAGLQPDVVSYALLI 278
+ARKLF +M RG + +Y+ L++ K E +++++M GL P+ VSY LI
Sbjct: 354 EARKLFDVMITRGCKPDVFSYSILINGYCMVKRIDEAKQLFNEMIHQGLTPNTVSYTTLI 413
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCS 338
+A+ + + EA +F++M G P Y++LL+ F G + +A +F+ M+
Sbjct: 414 HAFCQLGKLREARELFKDMHTNGYLPDLCTYSVLLEGFCKQGYLGKAFRLFRAMQGTYLK 473
Query: 339 PDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEI 398
P++ YT ++ + + ++ A K F L G P+V Y T+I G K L++ +E
Sbjct: 474 PNLVMYTILIDSMCKSGNLNHARKLFSELFVHGLQPDVQIYTTIINGLCKEGLLDEALEA 533
Query: 399 YDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQ 446
+ KM +G PN+ + I+ + ++KD AV EM GF D+
Sbjct: 534 FRKMEEDGCPPNEFSYNVIIRGFLQHKDESRAVQLIGEMRDKGFVADE 581
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 101/428 (23%), Positives = 197/428 (46%), Gaps = 27/428 (6%)
Query: 56 QPLPKDL----VLGTLVRLKQLKKWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGD 111
+PLP + +L +VR++Q ++ V + + + + N +LI +
Sbjct: 85 KPLPCIIQFNKLLSAIVRMRQY--YDAVISLSKQMELAGLSP-NTCTLNILINCFCLMQH 141
Query: 112 FNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQI 171
+ VL+ + K G P++++ T L+ + G + A +F M + G +P TY
Sbjct: 142 VDLGFSVLAKVIKLGLQPTIITFTTLINGLCKAGEFAQALELFDDMVARGCQPDVYTYTT 201
Query: 172 ILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMA 231
I+ + + A + + + +PD + +I K +A +F+ M
Sbjct: 202 IINGLCKMGETAAAAGLIKKM---GEVGCQPDVVTYSTLIDSLCKDRLVNEALDIFSYMK 258
Query: 232 ERGVQQSTVTYNSLM----SFETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARRE 287
+G+ + V+Y SL+ SF + +KE S + ++M + PD+V+++LLI+ + K
Sbjct: 259 AKGISPTVVSYTSLIQGLCSF-SRWKEASAMLNEMTSLNIMPDIVTFSLLIDIFCKEGNV 317
Query: 288 EEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTM 347
EA V + M + GV P YN L+ +++ V +AR +F M C PD+ SY+ +
Sbjct: 318 LEAQGVLKTMTEMGVEPNVITYNSLMHGYSLQMEVVEARKLFDVMITRGCKPDVFSYSIL 377
Query: 348 LSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGI 407
++ Y ++ A++ F + G PN ++Y TLI + ++ L + E++ M NG
Sbjct: 378 INGYCMVKRIDEAKQLFNEMIHQGLTPNTVSYTTLIHAFCQLGKLREARELFKDMHTNGY 437
Query: 408 KPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILL-SLAKTADERNEAN 466
P+ ++ +++ + K A ++ M+ P+ IL+ S+ K+
Sbjct: 438 LPDLCTYSVLLEGFCKQGYLGKAFRLFRAMQGTYLKPNLVMYTILIDSMCKS-------- 489
Query: 467 ELLGNFNH 474
GN NH
Sbjct: 490 ---GNLNH 494
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 73/334 (21%), Positives = 146/334 (43%), Gaps = 5/334 (1%)
Query: 149 NAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFH 208
+A A F M P P + + +L V ++ +A V E + L P+ +
Sbjct: 73 DALASFNHMLHRKPLPCIIQFNKLLSAIVRMRQYYDA--VISLSKQMELAGLSPNTCTLN 130
Query: 209 MMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSK---IYDQMQRA 265
++I + + + A + + G+Q + +T+ +L++ E ++ ++D M
Sbjct: 131 ILINCFCLMQHVDLGFSVLAKVIKLGLQPTIITFTTLINGLCKAGEFAQALELFDDMVAR 190
Query: 266 GLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQA 325
G QPDV +Y +IN K A + ++M + G +P Y+ L+D+ +V++A
Sbjct: 191 GCQPDVYTYTTIINGLCKMGETAAAAGLIKKMGEVGCQPDVVTYSTLIDSLCKDRLVNEA 250
Query: 326 RTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKG 385
+F M+ SP + SYT+++ + S + A + +P+++T+ LI
Sbjct: 251 LDIFSYMKAKGISPTVVSYTSLIQGLCSFSRWKEASAMLNEMTSLNIMPDIVTFSLLIDI 310
Query: 386 YAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPD 445
+ K N+ + + M G++PN + ++M Y + A + M + G PD
Sbjct: 311 FCKEGNVLEAQGVLKTMTEMGVEPNVITYNSLMHGYSLQMEVVEARKLFDVMITRGCKPD 370
Query: 446 QKAKNILLSLAKTADERNEANELLGNFNHPNNEP 479
+ +IL++ +EA +L H P
Sbjct: 371 VFSYSILINGYCMVKRIDEAKQLFNEMIHQGLTP 404
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 61/259 (23%), Positives = 112/259 (43%), Gaps = 4/259 (1%)
Query: 227 FALMAERGVQQSTVTYNSLMS----FETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYG 282
F M R + +N L+S Y V + QM+ AGL P+ + +LIN +
Sbjct: 78 FNHMLHRKPLPCIIQFNKLLSAIVRMRQYYDAVISLSKQMELAGLSPNTCTLNILINCFC 137
Query: 283 KARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDIC 342
+ + +V +++ G++PT + L++ +G QA +F M C PD+
Sbjct: 138 LMQHVDLGFSVLAKVIKLGLQPTIITFTTLINGLCKAGEFAQALELFDDMVARGCQPDVY 197
Query: 343 SYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKM 402
+YTT+++ + A +++ + G P+V+TY TLI K + + ++I+ M
Sbjct: 198 TYTTIINGLCKMGETAAAAGLIKKMGEVGCQPDVVTYSTLIDSLCKDRLVNEALDIFSYM 257
Query: 403 RVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADER 462
+ GI P +T+++ + A EM S PD ++L+ +
Sbjct: 258 KAKGISPTVVSYTSLIQGLCSFSRWKEASAMLNEMTSLNIMPDIVTFSLLIDIFCKEGNV 317
Query: 463 NEANELLGNFNHPNNEPGI 481
EA +L EP +
Sbjct: 318 LEAQGVLKTMTEMGVEPNV 336
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 104/225 (46%), Gaps = 6/225 (2%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + + L+ Y Q + +A K+ M +G P V S++ L+ Y R A+ +F
Sbjct: 335 NVITYNSLMHGYSLQMEVVEARKLFDVMITRGCKPDVFSYSILINGYCMVKRIDEAKQLF 394
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
M G P+ ++Y ++ F + K +EA E+F D + PD + +++ +
Sbjct: 395 NEMIHQGLTPNTVSYTTLIHAFCQLGKLREARELFK---DMHTNGYLPDLCTYSVLLEGF 451
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSL---MSFETNYKEVSKIYDQMQRAGLQPDV 271
K G KA +LF M ++ + V Y L M N K++ ++ GLQPDV
Sbjct: 452 CKQGYLGKAFRLFRAMQGTYLKPNLVMYTILIDSMCKSGNLNHARKLFSELFVHGLQPDV 511
Query: 272 VSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAF 316
Y +IN K +EAL F +M + G P +YN+++ F
Sbjct: 512 QIYTTIINGLCKEGLLDEALEAFRKMEEDGCPPNEFSYNVIIRGF 556
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 80/163 (49%), Gaps = 3/163 (1%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + + LI A+ + G +A ++ M+ GY P + +++ L+E + + G A +F
Sbjct: 405 NTVSYTTLIHAFCQLGKLREARELFKDMHTNGYLPDLCTYSVLLEGFCKQGYLGKAFRLF 464
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
R MQ + +P+ + Y I++ ++ A ++F L L+PD +++ +I
Sbjct: 465 RAMQGTYLKPNLVMYTILIDSMCKSGNLNHARKLFSELFVHG---LQPDVQIYTTIINGL 521
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSK 257
K G ++A + F M E G + +YN ++ +K+ S+
Sbjct: 522 CKEGLLDEALEAFRKMEEDGCPPNEFSYNVIIRGFLQHKDESR 564
Score = 45.4 bits (106), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 23/89 (25%), Positives = 45/89 (50%)
Query: 90 SWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKN 149
++ N + + +LI + K G+ N A K+ S + G P V +T ++ + G
Sbjct: 470 TYLKPNLVMYTILIDSMCKSGNLNHARKLFSELFVHGLQPDVQIYTTIINGLCKEGLLDE 529
Query: 150 AEAIFRRMQSSGPRPSALTYQIILKLFVE 178
A FR+M+ G P+ +Y +I++ F++
Sbjct: 530 ALEAFRKMEEDGCPPNEFSYNVIIRGFLQ 558
>gi|224092336|ref|XP_002309564.1| predicted protein [Populus trichocarpa]
gi|222855540|gb|EEE93087.1| predicted protein [Populus trichocarpa]
Length = 593
Score = 186 bits (472), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 110/376 (29%), Positives = 194/376 (51%), Gaps = 8/376 (2%)
Query: 99 FLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQ 158
+ +I K G+ A +L M + G P+VV+++ +++++ + R A IF M+
Sbjct: 206 YTTIINGLCKIGETAAAAGLLKKMEEAGCQPNVVTYSTIIDSHRKDRRVNEALDIFSYMK 265
Query: 159 SSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKS-PLKPDQKMFHMMIYMYKKA 217
G P TY +++ +++KEA LL+E +S + PD F++++ K
Sbjct: 266 VKGISPDIFTYNSLIQGLCNFSQWKEAS----ALLNEMRSLNIMPDIVTFNVLVDTICKE 321
Query: 218 GGYEKARKLFALMAERGVQQSTVTYNSLM---SFETNYKEVSKIYDQMQRAGLQPDVVSY 274
G +A+ + M E GV+ VTY+SLM S + E K++D M G +PDV SY
Sbjct: 322 GKVSEAQGVLKTMTEMGVEPDVVTYSSLMYGYSLRSEVVEARKLFDAMITKGCKPDVFSY 381
Query: 275 ALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRR 334
+LIN Y K +R +EA +F EM+ G+ P + +YN L+ G + +AR +FK M
Sbjct: 382 NILINGYCKVKRIDEAKQLFNEMIHQGLTPNNVSYNTLIHGLCQLGSLREARNLFKNMHT 441
Query: 335 DRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEK 394
+ P++ +Y+ +L + A + FR ++ PN++ Y LI K NL
Sbjct: 442 NGNLPNLFTYSILLDGFCKQGYFGKAFRLFRAMQSTYSKPNLVMYNILIDAMCKSGNLRD 501
Query: 395 MMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLS 454
+++ ++ V G++PN I+TTI++ K D A+ ++ ME G PPD+ + N+++
Sbjct: 502 ARKLFSELFVKGLQPNAQIYTTIINGLCKEGLLDEALEAFRNMEEDGCPPDEISYNVIIR 561
Query: 455 LAKTADERNEANELLG 470
+ + A +L+G
Sbjct: 562 GFLHHKDESRAVQLIG 577
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 104/395 (26%), Positives = 187/395 (47%), Gaps = 13/395 (3%)
Query: 101 MLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSS 160
+LI + + A VL+ + K G P++V+ T L+ + G++ A +F M +
Sbjct: 138 ILINCFSHLQRVDLAFSVLAKIIKLGLQPTIVTFTTLINWLCKVGKFAQAMELFDDMVAR 197
Query: 161 GPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGY 220
G RP TY I+ K E L E++ +P+ + +I ++K
Sbjct: 198 GCRPDVYTYTTIINGLC---KIGETAAAAGLLKKMEEAGCQPNVVTYSTIIDSHRKDRRV 254
Query: 221 EKARKLFALMAERGVQQSTVTYNSLMSFETNY---KEVSKIYDQMQRAGLQPDVVSYALL 277
+A +F+ M +G+ TYNSL+ N+ KE S + ++M+ + PD+V++ +L
Sbjct: 255 NEALDIFSYMKVKGISPDIFTYNSLIQGLCNFSQWKEASALLNEMRSLNIMPDIVTFNVL 314
Query: 278 INAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRC 337
++ K + EA V + M + GV P Y+ L+ +++ V +AR +F M C
Sbjct: 315 VDTICKEGKVSEAQGVLKTMTEMGVEPDVVTYSSLMYGYSLRSEVVEARKLFDAMITKGC 374
Query: 338 SPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMME 397
PD+ SY +++ Y ++ A++ F + G PN ++Y TLI G ++ +L +
Sbjct: 375 KPDVFSYNILINGYCKVKRIDEAKQLFNEMIHQGLTPNNVSYNTLIHGLCQLGSLREARN 434
Query: 398 IYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILL-SLA 456
++ M NG PN ++ ++D + K F A ++ M+S P+ NIL+ ++
Sbjct: 435 LFKNMHTNGNLPNLFTYSILLDGFCKQGYFGKAFRLFRAMQSTYSKPNLVMYNILIDAMC 494
Query: 457 KTA---DERNEANELLGNFNHPNNE---PGINGLS 485
K+ D R +EL PN + INGL
Sbjct: 495 KSGNLRDARKLFSELFVKGLQPNAQIYTTIINGLC 529
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 92/365 (25%), Positives = 168/365 (46%), Gaps = 7/365 (1%)
Query: 129 PSVVSHTALMEAYGRGGRYKNAE-AIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEE 187
P ++ T L+ A + G+Y + ++ ++M+ +G P+ T I++ F + A
Sbjct: 95 PCIIQFTKLLSAIVKMGQYYDTVISLTKQMELAGLSPNIYTLSILINCFSHLQRVDLAFS 154
Query: 188 VFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMS 247
V ++ K L+P F +I K G + +A +LF M RG + TY ++++
Sbjct: 155 VLAKII---KLGLQPTIVTFTTLINWLCKVGKFAQAMELFDDMVARGCRPDVYTYTTIIN 211
Query: 248 FETNYKEVSK---IYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRP 304
E + + +M+ AG QP+VV+Y+ +I+++ K RR EAL +F M G+ P
Sbjct: 212 GLCKIGETAAAAGLLKKMEEAGCQPNVVTYSTIIDSHRKDRRVNEALDIFSYMKVKGISP 271
Query: 305 THKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFF 364
YN L+ +A + MR PDI ++ ++ + A+
Sbjct: 272 DIFTYNSLIQGLCNFSQWKEASALLNEMRSLNIMPDIVTFNVLVDTICKEGKVSEAQGVL 331
Query: 365 RRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKN 424
+ + + G P+V+TY +L+ GY+ + + + +++D M G KP+ + +++ Y K
Sbjct: 332 KTMTEMGVEPDVVTYSSLMYGYSLRSEVVEARKLFDAMITKGCKPDVFSYNILINGYCKV 391
Query: 425 KDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGINGL 484
K D A + EM G P+ + N L+ EA L N + N P +
Sbjct: 392 KRIDEAKQLFNEMIHQGLTPNNVSYNTLIHGLCQLGSLREARNLFKNMHTNGNLPNLFTY 451
Query: 485 SISVD 489
SI +D
Sbjct: 452 SILLD 456
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 75/312 (24%), Positives = 152/312 (48%), Gaps = 7/312 (2%)
Query: 70 LKQLKKWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAP 129
L +W S +L +R + + + F +L+ K+G ++A+ VL M + G P
Sbjct: 283 LCNFSQWKEASALLNEMRSLNIMP-DIVTFNVLVDTICKEGKVSEAQGVLKTMTEMGVEP 341
Query: 130 SVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVF 189
VV++++LM Y A +F M + G +P +Y I++ + + + EA+++F
Sbjct: 342 DVVTYSSLMYGYSLRSEVVEARKLFDAMITKGCKPDVFSYNILINGYCKVKRIDEAKQLF 401
Query: 190 MTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLM--- 246
++ + L P+ ++ +I+ + G +AR LF M G + TY+ L+
Sbjct: 402 NEMIHQG---LTPNNVSYNTLIHGLCQLGSLREARNLFKNMHTNGNLPNLFTYSILLDGF 458
Query: 247 SFETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTH 306
+ + + +++ MQ +P++V Y +LI+A K+ +A +F E+ G++P
Sbjct: 459 CKQGYFGKAFRLFRAMQSTYSKPNLVMYNILIDAMCKSGNLRDARKLFSELFVKGLQPNA 518
Query: 307 KAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRR 366
+ Y +++ G++D+A F+ M D C PD SY ++ +++ D A +
Sbjct: 519 QIYTTIINGLCKEGLLDEALEAFRNMEEDGCPPDEISYNVIIRGFLHHKDESRAVQLIGE 578
Query: 367 LKQDGFVPNVIT 378
++ GF+ +V T
Sbjct: 579 MRDKGFIADVGT 590
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 40/182 (21%), Positives = 73/182 (40%), Gaps = 1/182 (0%)
Query: 322 VDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDM-EGAEKFFRRLKQDGFVPNVITYG 380
+D A F M + P I +T +LSA V + ++++ G PN+ T
Sbjct: 78 IDDALASFNHMLHRKPLPCIIQFTKLLSAIVKMGQYYDTVISLTKQMELAGLSPNIYTLS 137
Query: 381 TLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESC 440
LI ++ + ++ + K+ G++P FTT+++ K F A+ + +M +
Sbjct: 138 ILINCFSHLQRVDLAFSVLAKIIKLGLQPTIVTFTTLINWLCKVGKFAQAMELFDDMVAR 197
Query: 441 GFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGINGLSISVDEEDDDDDDDED 500
G PD +++ E A LL +P + S +D D +E
Sbjct: 198 GCRPDVYTYTTIINGLCKIGETAAAAGLLKKMEEAGCQPNVVTYSTIIDSHRKDRRVNEA 257
Query: 501 DD 502
D
Sbjct: 258 LD 259
>gi|302806733|ref|XP_002985098.1| hypothetical protein SELMODRAFT_121399 [Selaginella moellendorffii]
gi|300147308|gb|EFJ13973.1| hypothetical protein SELMODRAFT_121399 [Selaginella moellendorffii]
Length = 659
Score = 181 bits (460), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 120/452 (26%), Positives = 214/452 (47%), Gaps = 18/452 (3%)
Query: 7 RKFMQKRRKVEVFKDAADEAGKKNWRRLMNQIEEVGSAVAVLRSERTRGQPLPKDLVLGT 66
RK M+K ++ + D N NQ+EEV L E P T
Sbjct: 182 RKLMEKMKESGLTPDTVAYNALLNGLCKQNQLEEVSK----LLEEMVEAGREPDTFSYNT 237
Query: 67 LVR-LKQLKKWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKK 125
+V L + K+ ++LE + I+ + + + L+ + K ++AE++L M +
Sbjct: 238 VVACLCESGKYEEAGKILEKM-IEKKCGPDVVTYNSLMDGFCKVSKMDEAERLLEDMVGR 296
Query: 126 GYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEA 185
AP+V+++T L+ + R R +A + M +G P +TY +L +A K +EA
Sbjct: 297 RCAPTVITYTTLIGGFSRADRLADAYRVMEDMFKAGISPDLVTYNCLLDGLCKAGKLEEA 356
Query: 186 EEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSL 245
E+ +++++ +P D + +++ K G + AR L +M ERG Q + VT+N++
Sbjct: 357 HELLEVMVEKDCAP---DVVTYSILVNGLCKLGKVDDARLLLEMMLERGCQPNLVTFNTM 413
Query: 246 MSFETNYKEV---SKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGV 302
+ +V K+ + M+ PDVV+Y+ LI+ Y KA R ++A A+ G+
Sbjct: 414 IDGFCKAGKVDEGHKVLELMKEVSCTPDVVTYSTLIDGYCKANRMQDAFAIL------GI 467
Query: 303 RPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEK 362
P +Y+ +L+ +G V++A+ V M + C P Y ++ + + A K
Sbjct: 468 SPDKASYSSMLEGLCSTGKVEEAQEVMDLMTKQGCPPTSSHYALIIGGLCDVERGDEALK 527
Query: 363 FFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYG 422
+ + + G PN+ TY LI G K +E + + D M G P+ +T+++D +
Sbjct: 528 MLQVMSERGCEPNLYTYSILINGLCKTKRVEDAINVLDVMLEKGCVPDVATYTSLIDGFC 587
Query: 423 KNKDFDSAVVWYKEMESCGFPPDQKAKNILLS 454
K D+A +K M G PD+ A NIL+S
Sbjct: 588 KINKMDAAYQCFKTMRDSGCEPDKLAYNILIS 619
Score = 162 bits (409), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 106/384 (27%), Positives = 184/384 (47%), Gaps = 16/384 (4%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFR-RMQSS 160
LIT + + G+ ++ + M + ++P V++H +++AY + G A + FR +M S
Sbjct: 30 LITGFSRAGNSKMVLEIANEMLARRFSPDVITHNTILKAYCQIGDLDRALSHFRGKMWCS 89
Query: 161 GPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEE-KSPLKPDQKMFHMMIYMYKKAGG 219
P+A TY I++ + + EA + LLDE + PD +++ +I K G
Sbjct: 90 ---PTAFTYCILIHGLCQCQRIDEAYQ----LLDEMIQKDCHPDAAVYNCLIAGLCKMGK 142
Query: 220 YEKARKLFALMAERGVQQSTVTYNSLM--SFETN-YKEVSKIYDQMQRAGLQPDVVSYAL 276
+ AR + +M ER +TY SL+ +TN E K+ ++M+ +GL PD V+Y
Sbjct: 143 IDAARNVLKMMLERSCVPDVITYTSLIVGCCQTNALDEARKLMEKMKESGLTPDTVAYNA 202
Query: 277 LINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDR 336
L+N K + EE + EEM++AG P +YN ++ SG ++A + + M +
Sbjct: 203 LLNGLCKQNQLEEVSKLLEEMVEAGREPDTFSYNTVVACLCESGKYEEAGKILEKMIEKK 262
Query: 337 CSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMM 396
C PD+ +Y +++ + S M+ AE+ + P VITY TLI G+++ + L
Sbjct: 263 CGPDVVTYNSLMDGFCKVSKMDEAERLLEDMVGRRCAPTVITYTTLIGGFSRADRLADAY 322
Query: 397 EIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLS-- 454
+ + M GI P+ + ++D K + A + M PD +IL++
Sbjct: 323 RVMEDMFKAGISPDLVTYNCLLDGLCKAGKLEEAHELLEVMVEKDCAPDVVTYSILVNGL 382
Query: 455 --LAKTADERNEANELLGNFNHPN 476
L K D R +L PN
Sbjct: 383 CKLGKVDDARLLLEMMLERGCQPN 406
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 88/371 (23%), Positives = 174/371 (46%), Gaps = 12/371 (3%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
LI K G + A VL M ++ P V+++T+L+ + A + +M+ SG
Sbjct: 133 LIAGLCKMGKIDAARNVLKMMLERSCVPDVITYTSLIVGCCQTNALDEARKLMEKMKESG 192
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
P + Y +L + N+ +E ++ +++ + +PD ++ ++ ++G YE
Sbjct: 193 LTPDTVAYNALLNGLCKQNQLEEVSKLLEEMVEAGR---EPDTFSYNTVVACLCESGKYE 249
Query: 222 KARKLFALMAERGVQQSTVTYNSLM---SFETNYKEVSKIYDQMQRAGLQPDVVSYALLI 278
+A K+ M E+ VTYNSLM + E ++ + M P V++Y LI
Sbjct: 250 EAGKILEKMIEKKCGPDVVTYNSLMDGFCKVSKMDEAERLLEDMVGRRCAPTVITYTTLI 309
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCS 338
+ +A R +A V E+M AG+ P YN LLD +G +++A + + M C+
Sbjct: 310 GGFSRADRLADAYRVMEDMFKAGISPDLVTYNCLLDGLCKAGKLEEAHELLEVMVEKDCA 369
Query: 339 PDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEI 398
PD+ +Y+ +++ ++ A + + G PN++T+ T+I G+ K +++ ++
Sbjct: 370 PDVVTYSILVNGLCKLGKVDDARLLLEMMLERGCQPNLVTFNTMIDGFCKAGKVDEGHKV 429
Query: 399 YDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKT 458
+ M+ P+ ++T++D Y K A G PD+ + + +L +
Sbjct: 430 LELMKEVSCTPDVVTYSTLIDGYCKANRMQDAFAIL------GISPDKASYSSMLEGLCS 483
Query: 459 ADERNEANELL 469
+ EA E++
Sbjct: 484 TGKVEEAQEVM 494
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 93/423 (21%), Positives = 195/423 (46%), Gaps = 13/423 (3%)
Query: 70 LKQLKKWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAP 129
L ++ K + VL+ + +S + + + LI + ++A K++ M + G P
Sbjct: 137 LCKMGKIDAARNVLKMMLERSCVP-DVITYTSLIVGCCQTNALDEARKLMEKMKESGLTP 195
Query: 130 SVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVF 189
V++ AL+ + + + + M +G P +Y ++ E+ K++EA ++
Sbjct: 196 DTVAYNALLNGLCKQNQLEEVSKLLEEMVEAGREPDTFSYNTVVACLCESGKYEEAGKIL 255
Query: 190 MTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLM--- 246
+++++ PD ++ ++ + K ++A +L M R + +TY +L+
Sbjct: 256 EKMIEKK---CGPDVVTYNSLMDGFCKVSKMDEAERLLEDMVGRRCAPTVITYTTLIGGF 312
Query: 247 SFETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTH 306
S + ++ + M +AG+ PD+V+Y L++ KA + EEA + E M++ P
Sbjct: 313 SRADRLADAYRVMEDMFKAGISPDLVTYNCLLDGLCKAGKLEEAHELLEVMVEKDCAPDV 372
Query: 307 KAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRR 366
Y+IL++ G VD AR + + M C P++ ++ TM+ + A ++ K
Sbjct: 373 VTYSILVNGLCKLGKVDDARLLLEMMLERGCQPNLVTFNTMIDGFCKAGKVDEGHKVLEL 432
Query: 367 LKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKD 426
+K+ P+V+TY TLI GY K N ++ D + GI P++ ++++++
Sbjct: 433 MKEVSCTPDVVTYSTLIDGYCKANRMQ------DAFAILGISPDKASYSSMLEGLCSTGK 486
Query: 427 FDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGINGLSI 486
+ A M G PP +++ + +EA ++L + EP + SI
Sbjct: 487 VEEAQEVMDLMTKQGCPPTSSHYALIIGGLCDVERGDEALKMLQVMSERGCEPNLYTYSI 546
Query: 487 SVD 489
++
Sbjct: 547 LIN 549
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 74/320 (23%), Positives = 150/320 (46%), Gaps = 14/320 (4%)
Query: 70 LKQLKKWNVVSEVLEWLRIQSWWDF--NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGY 127
L L K + E E L + D + + + +L+ K G + A +L M ++G
Sbjct: 344 LDGLCKAGKLEEAHELLEVMVEKDCAPDVVTYSILVNGLCKLGKVDDARLLLEMMLERGC 403
Query: 128 APSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEE 187
P++V+ +++ + + G+ + M+ P +TY ++ + +AN+ ++A
Sbjct: 404 QPNLVTFNTMIDGFCKAGKVDEGHKVLELMKEVSCTPDVVTYSTLIDGYCKANRMQDAFA 463
Query: 188 VFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMS 247
+ + PD+ + M+ G E+A+++ LM ++G ++ Y ++
Sbjct: 464 IL---------GISPDKASYSSMLEGLCSTGKVEEAQEVMDLMTKQGCPPTSSHYALIIG 514
Query: 248 FETNYK---EVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRP 304
+ + E K+ M G +P++ +Y++LIN K +R E+A+ V + ML+ G P
Sbjct: 515 GLCDVERGDEALKMLQVMSERGCEPNLYTYSILINGLCKTKRVEDAINVLDVMLEKGCVP 574
Query: 305 THKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFF 364
Y L+D F +D A FK MR C PD +Y ++S + + ++E A +
Sbjct: 575 DVATYTSLIDGFCKINKMDAAYQCFKTMRDSGCEPDKLAYNILISGFCQSGNVEKAIEVM 634
Query: 365 RRLKQDGFVPNVITYGTLIK 384
+ + + G P+ TY +L++
Sbjct: 635 QLMLEKGCNPDAATYFSLMR 654
Score = 108 bits (270), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 63/274 (22%), Positives = 126/274 (45%), Gaps = 5/274 (1%)
Query: 199 PLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSKI 258
P KP + +I + +AG + ++ M R +T+N+++ ++ +
Sbjct: 19 PSKPSNSTYGALITGFSRAGNSKMVLEIANEMLARRFSPDVITHNTILKAYCQIGDLDRA 78
Query: 259 YDQMQ-RAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFA 317
+ + P +Y +LI+ + +R +EA + +EM+ P YN L+
Sbjct: 79 LSHFRGKMWCSPTAFTYCILIHGLCQCQRIDEAYQLLDEMIQKDCHPDAAVYNCLIAGLC 138
Query: 318 ISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVI 377
G +D AR V K M C PD+ +YT+++ + ++ A K ++K+ G P+ +
Sbjct: 139 KMGKIDAARNVLKMMLERSCVPDVITYTSLIVGCCQTNALDEARKLMEKMKESGLTPDTV 198
Query: 378 TYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEM 437
Y L+ G K N LE++ ++ ++M G +P+ + T++ ++ ++ A ++M
Sbjct: 199 AYNALLNGLCKQNQLEEVSKLLEEMVEAGREPDTFSYNTVVACLCESGKYEEAGKILEKM 258
Query: 438 --ESCGFPPDQKAKNILLSLAKTADERNEANELL 469
+ CG PD N L+ + +EA LL
Sbjct: 259 IEKKCG--PDVVTYNSLMDGFCKVSKMDEAERLL 290
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/194 (22%), Positives = 76/194 (39%), Gaps = 2/194 (1%)
Query: 286 REEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYT 345
R E + F E +P++ Y L+ F+ +G + M R SPD+ ++
Sbjct: 4 RPLEGYSFFRERFSDPSKPSNSTYGALITGFSRAGNSKMVLEIANEMLARRFSPDVITHN 63
Query: 346 TMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVN 405
T+L AY D++ A FR + P TY LI G + +++ ++ D+M
Sbjct: 64 TILKAYCQIGDLDRALSHFR--GKMWCSPTAFTYCILIHGLCQCQRIDEAYQLLDEMIQK 121
Query: 406 GIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEA 465
P+ ++ ++ K D+A K M PD L+ + +EA
Sbjct: 122 DCHPDAAVYNCLIAGLCKMGKIDAARNVLKMMLERSCVPDVITYTSLIVGCCQTNALDEA 181
Query: 466 NELLGNFNHPNNEP 479
+L+ P
Sbjct: 182 RKLMEKMKESGLTP 195
>gi|297806221|ref|XP_002870994.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297316831|gb|EFH47253.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 819
Score = 181 bits (460), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 113/428 (26%), Positives = 207/428 (48%), Gaps = 27/428 (6%)
Query: 63 VLGTLVRLKQLKKWNVVSEVLEWLRIQSWWDFNEM----DFLMLITAYGKQGDFNKAEKV 118
+L L L KK+++ +W Q D+ M ++I+ GK+G + A +
Sbjct: 138 LLAFLKGLGFHKKFDLALCAFDWFMKQK--DYQSMLDNSVIAIVISMLGKEGRVSSAANL 195
Query: 119 LSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVE 178
+ + + G++ V S+T+L+ A+ GRY+ A +F++M+ G +P+ +TY +IL +F
Sbjct: 196 FNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNVFKKMEEEGCKPTLITYNVILNVF-- 253
Query: 179 ANKFKEAEEVFMTLLDEEKS-PLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQ 237
K +L+++ KS + PD ++ +I K+ +++A ++F M G
Sbjct: 254 -GKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSH 312
Query: 238 STVTYNSLMSF---ETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVF 294
VTYN+L+ KE K+ ++M+ G P +V+Y LI+AY + +EA+ +
Sbjct: 313 DKVTYNALLDVYGKSHRPKEAMKVLNEMELNGFSPSIVTYNSLISAYARDGMLDEAMELK 372
Query: 295 EEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNA 354
+M + G +P Y LL F +G V+ A +F+ MR C P+IC++ + Y N
Sbjct: 373 NQMAEKGTKPDVFTYTTLLSGFERAGKVESAMNIFEEMRNAGCKPNICTFNAFIKMYGNR 432
Query: 355 SDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIF 414
K F + G P+++T+ TL+ + + ++ ++ +M+ G P + F
Sbjct: 433 GKFVDMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETF 492
Query: 415 TTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLS--------------LAKTAD 460
T++ AY + F+ A+ Y+ M G PD N +L+ LA+ D
Sbjct: 493 NTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMED 552
Query: 461 ERNEANEL 468
R + NEL
Sbjct: 553 GRCKPNEL 560
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 122/467 (26%), Positives = 218/467 (46%), Gaps = 14/467 (2%)
Query: 13 RRKVEVFKDAADEAGKKN---WRRLMNQIEEVGSAVAVLRS--ERTRGQPL-PKDLVLGT 66
R V VFK +E K + ++N ++G+ + S E+ + + P T
Sbjct: 225 REAVNVFKKMEEEGCKPTLITYNVILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNT 284
Query: 67 LVRL-KQLKKWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKK 125
L+ K+ ++V E ++ + + +++ + L+ YGK +A KVL+ M
Sbjct: 285 LITCCKRGSLHQEAAQVFEEMK-AAGFSHDKVTYNALLDVYGKSHRPKEAMKVLNEMELN 343
Query: 126 GYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEA 185
G++PS+V++ +L+ AY R G A + +M G +P TY +L F A K + A
Sbjct: 344 GFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESA 403
Query: 186 EEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSL 245
+F + + KP+ F+ I MY G + K+F + G+ VT+N+L
Sbjct: 404 MNIFEEM---RNAGCKPNICTFNAFIKMYGNRGKFVDMMKIFDEINVCGLSPDIVTWNTL 460
Query: 246 MS-FETNY--KEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGV 302
++ F N EVS ++ +M+RAG P+ ++ LI+AY + E+A+ V+ MLDAGV
Sbjct: 461 LAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGV 520
Query: 303 RPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEK 362
P YN +L A A GM +Q+ V M RC P+ +Y ++L AY N ++
Sbjct: 521 TPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEIGLMHS 580
Query: 363 FFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYG 422
+ P + TL+ +K + L + + +++ G P+ T +++ YG
Sbjct: 581 LAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKERGFSPDITTLNSMVSIYG 640
Query: 423 KNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELL 469
+ + A M+ GF P N L+ + + + ++ E+L
Sbjct: 641 RRQMVGKANEVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSEEIL 687
Score = 145 bits (365), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 101/394 (25%), Positives = 186/394 (47%), Gaps = 9/394 (2%)
Query: 101 MLITAYGKQGD-FNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQS 159
+++ +GK G +NK ++ M G AP ++ L+ RG ++ A +F M++
Sbjct: 248 VILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKA 307
Query: 160 SGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDE-EKSPLKPDQKMFHMMIYMYKKAG 218
+G +TY +L ++ ++++ KEA M +L+E E + P ++ +I Y + G
Sbjct: 308 AGFSHDKVTYNALLDVYGKSHRPKEA----MKVLNEMELNGFSPSIVTYNSLISAYARDG 363
Query: 219 GYEKARKLFALMAERGVQQSTVTYNSLMS-FETNYKEVS--KIYDQMQRAGLQPDVVSYA 275
++A +L MAE+G + TY +L+S FE K S I+++M+ AG +P++ ++
Sbjct: 364 MLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMNIFEEMRNAGCKPNICTFN 423
Query: 276 LLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRD 335
I YG + + + +F+E+ G+ P +N LL F +GM + VFK M+R
Sbjct: 424 AFIKMYGNRGKFVDMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRA 483
Query: 336 RCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKM 395
P+ ++ T++SAY E A +RR+ G P++ TY T++ A+ E+
Sbjct: 484 GFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQS 543
Query: 396 MEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSL 455
++ +M KPN+ + +++ AY K+ +E+ S P L+ +
Sbjct: 544 EKVLAEMEDGRCKPNELTYCSLLHAYANGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLV 603
Query: 456 AKTADERNEANELLGNFNHPNNEPGINGLSISVD 489
D EA P I L+ V
Sbjct: 604 CSKCDLLPEAERAFSELKERGFSPDITTLNSMVS 637
Score = 138 bits (348), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 87/381 (22%), Positives = 169/381 (44%), Gaps = 41/381 (10%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N F I YG +G F K+ +N G +P +V+ L+ +G+ G +F
Sbjct: 418 NICTFNAFIKMYGNRGKFVDMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVF 477
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
+ M+ +G P T+ ++ + F++A V+ +LD + + PD ++ ++
Sbjct: 478 KEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLD---AGVTPDLSTYNTVLAAL 534
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVS------------------ 256
+ G +E++ K+ A M + + + +TY SL+ N KE+
Sbjct: 535 ARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEIGLMHSLAEEVYSGVIEPRA 594
Query: 257 --------------------KIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEE 296
+ + +++ G PD+ + +++ YG+ + +A V +
Sbjct: 595 VLLKTLVLVCSKCDLLPEAERAFSELKERGFSPDITTLNSMVSIYGRRQMVGKANEVLDY 654
Query: 297 MLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASD 356
M + G P+ YN L+ + S ++ + + + PDI SY T++ AY +
Sbjct: 655 MKERGFTPSMATYNSLMYMHSRSADFGKSEEILREILAKGIKPDIISYNTVIYAYCRNTR 714
Query: 357 MEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTT 416
M A + F ++ G VP+VITY T I YA + E+ + + M +G +PNQ + +
Sbjct: 715 MRDASRIFSEMRDSGIVPDVITYNTFIGSYAADSMFEEAIGVVRYMIKHGCRPNQNTYNS 774
Query: 417 IMDAYGKNKDFDSAVVWYKEM 437
I+D Y K D A ++ +++
Sbjct: 775 IVDGYCKLNRKDEAKLFVEDL 795
>gi|168055632|ref|XP_001779828.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162668740|gb|EDQ55341.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 730
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 116/448 (25%), Positives = 212/448 (47%), Gaps = 47/448 (10%)
Query: 10 MQKRRKVEVFKDAADEAGKKNWRRLMNQIEEVGSAVAVLRSERTRGQP-LPKDLVLGTLV 68
M RRK + + E+G++ R+++ V + S T +P L +L +
Sbjct: 1 MHSRRK-QPWDSGLTESGEELLRKIV-----VLPNDECVSSVLTTSEPNLSSSELLSIMK 54
Query: 69 RLKQLKKWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYA 128
L + +WN EV W+R + + + +++ G++ ++ + ++GY
Sbjct: 55 GLGREGQWNKALEVFNWMRQSVNFRPDGVTIAVMLRILGRESQLTTVSRLFKSLREEGYP 114
Query: 129 PSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEV 188
V ++T+L+ A R ++K A F +M+ +GP+PS +TY +I+ L+
Sbjct: 115 LDVYAYTSLISALSRNRKFKEALGFFEQMKEAGPQPSLVTYNVIIDLYG----------- 163
Query: 189 FMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSF 248
KK +E +LF M +G+Q TYN+ ++
Sbjct: 164 --------------------------KKGRSWENILELFEEMKAQGIQPDEYTYNTAITA 197
Query: 249 ETN---YKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPT 305
+ +E ++++ QM+ + PD V+Y L++ YGKA EA V +EM AG P
Sbjct: 198 CASGSLCEEATELFTQMKSSNCTPDRVTYNALLDVYGKAGWYNEAANVLKEMESAGCLPN 257
Query: 306 HKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFR 365
YN LL AF +G+ + A + M PD+ +YT++LSAY A +E A + +
Sbjct: 258 IVTYNELLSAFGRAGLCNAAAEMKDSMVSKGIEPDVFTYTSLLSAYSRAGKVEQAMEIYN 317
Query: 366 RLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNK 425
+++ PN T+ LI + K N +MM I++ M+ G++P+ + +++ A+GKN
Sbjct: 318 QMRTSNCTPNSFTFNALIGMHGKNKNFSEMMVIFEDMQACGVEPDIVTWNSLLGAFGKNG 377
Query: 426 DFDSAVVWYKEMESCGFPPDQKAKNILL 453
+ + ++ M+ GF PD+ NIL+
Sbjct: 378 MYSEVLKVFRGMKKAGFEPDKATFNILI 405
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 109/430 (25%), Positives = 202/430 (46%), Gaps = 9/430 (2%)
Query: 57 PLPKDLVLGTLVRL--KQLKKWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNK 114
P P + ++ L K+ + W + E+ E ++ Q +E + ITA +
Sbjct: 148 PQPSLVTYNVIIDLYGKKGRSWENILELFEEMKAQGIQP-DEYTYNTAITACASGSLCEE 206
Query: 115 AEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILK 174
A ++ + M P V++ AL++ YG+ G Y A + + M+S+G P+ +TY +L
Sbjct: 207 ATELFTQMKSSNCTPDRVTYNALLDVYGKAGWYNEAANVLKEMESAGCLPNIVTYNELLS 266
Query: 175 LFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERG 234
F A A E+ +++ + ++PD + ++ Y +AG E+A +++ M
Sbjct: 267 AFGRAGLCNAAAEMKDSMVSK---GIEPDVFTYTSLLSAYSRAGKVEQAMEIYNQMRTSN 323
Query: 235 VQQSTVTYNSLMSFE---TNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEAL 291
++ T+N+L+ N+ E+ I++ MQ G++PD+V++ L+ A+GK E L
Sbjct: 324 CTPNSFTFNALIGMHGKNKNFSEMMVIFEDMQACGVEPDIVTWNSLLGAFGKNGMYSEVL 383
Query: 292 AVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAY 351
VF M AG P +NIL++A+ G DQA +++ M + C+PD+ ++ T+L+A
Sbjct: 384 KVFRGMKKAGFEPDKATFNILIEAYGRCGSSDQALSIYDGMLQAGCTPDLATFNTLLAAL 443
Query: 352 VNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQ 411
E AE L + + PN I Y +++ YA LEK+ E+ D + + +
Sbjct: 444 AREGRWEHAELILDELNRSSYKPNDIAYASMLHAYANGGELEKLKEMVDTLHTIYVPFTK 503
Query: 412 TIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGN 471
+ T + Y K D A + M G+ D N ++S+ ++A +
Sbjct: 504 ILLKTFVLVYSKCSLVDEAEDAFLAMRHHGYLSDTSTFNAMISMYGKKGMMDKATDTFAL 563
Query: 472 FNHPNNEPGI 481
EP +
Sbjct: 564 LRSTGLEPDV 573
Score = 166 bits (420), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 104/390 (26%), Positives = 180/390 (46%), Gaps = 41/390 (10%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
L+ YGK G +N+A VL M G P++V++ L+ A+GR G A + M S G
Sbjct: 229 LLDVYGKAGWYNEAANVLKEMESAGCLPNIVTYNELLSAFGRAGLCNAAAEMKDSMVSKG 288
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
P TY +L + A K ++A E++ + S P+ F+ +I M+ K +
Sbjct: 289 IEPDVFTYTSLLSAYSRAGKVEQAMEIYNQM---RTSNCTPNSFTFNALIGMHGKNKNFS 345
Query: 222 KARKLFALMAERGVQQSTVTYNSLM-SFETN--YKEVSKIYDQMQRAGLQPDVVSYALLI 278
+ +F M GV+ VT+NSL+ +F N Y EV K++ M++AG +PD ++ +LI
Sbjct: 346 EMMVIFEDMQACGVEPDIVTWNSLLGAFGKNGMYSEVLKVFRGMKKAGFEPDKATFNILI 405
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCS 338
AYG+ ++AL++++ ML AG P +N LL A A G + A + + R
Sbjct: 406 EAYGRCGSSDQALSIYDGMLQAGCTPDLATFNTLLAALAREGRWEHAELILDELNRSSYK 465
Query: 339 PDICSYTTMLSAYVNASDMEG-----------------------------------AEKF 363
P+ +Y +ML AY N ++E AE
Sbjct: 466 PNDIAYASMLHAYANGGELEKLKEMVDTLHTIYVPFTKILLKTFVLVYSKCSLVDEAEDA 525
Query: 364 FRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGK 423
F ++ G++ + T+ +I Y K ++K + + +R G++P+ + +M YG+
Sbjct: 526 FLAMRHHGYLSDTSTFNAMISMYGKKGMMDKATDTFALLRSTGLEPDVVTYNCLMGMYGR 585
Query: 424 NKDFDSAVVWYKEMESCGFPPDQKAKNILL 453
+ +E + G PD + N ++
Sbjct: 586 EGMYRKCEATLRECMAAGQTPDLVSYNTVI 615
Score = 134 bits (338), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 92/422 (21%), Positives = 171/422 (40%), Gaps = 70/422 (16%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
L++A+G+ G N A ++ M KG P V ++T+L+ AY R G+ + A I+ +M++S
Sbjct: 264 LLSAFGRAGLCNAAAEMKDSMVSKGIEPDVFTYTSLLSAYSRAGKVEQAMEIYNQMRTSN 323
Query: 162 PRPSALTYQIILKLFVEANKFKEA--------------------------------EEVF 189
P++ T+ ++ + + F E EV
Sbjct: 324 CTPNSFTFNALIGMHGKNKNFSEMMVIFEDMQACGVEPDIVTWNSLLGAFGKNGMYSEVL 383
Query: 190 MTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSF- 248
+K+ +PD+ F+++I Y + G ++A ++ M + G T+N+L++
Sbjct: 384 KVFRGMKKAGFEPDKATFNILIEAYGRCGSSDQALSIYDGMLQAGCTPDLATFNTLLAAL 443
Query: 249 --ETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYG------------------------ 282
E ++ I D++ R+ +P+ ++YA +++AY
Sbjct: 444 AREGRWEHAELILDELNRSSYKPNDIAYASMLHAYANGGELEKLKEMVDTLHTIYVPFTK 503
Query: 283 -----------KARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKC 331
K +EA F M G +N ++ + GM+D+A F
Sbjct: 504 ILLKTFVLVYSKCSLVDEAEDAFLAMRHHGYLSDTSTFNAMISMYGKKGMMDKATDTFAL 563
Query: 332 MRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNN 391
+R PD+ +Y ++ Y E R G P++++Y T+I Y+K
Sbjct: 564 LRSTGLEPDVVTYNCLMGMYGREGMYRKCEATLRECMAAGQTPDLVSYNTVIFSYSKHGQ 623
Query: 392 LEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNI 451
L I+ +M NGI+P+ + T + Y F A+ K M G PD+
Sbjct: 624 LSSATRIFHEMVSNGIQPDSFTYNTFVGCYVNGGMFPEALSVVKHMHKTGCKPDEVTYRT 683
Query: 452 LL 453
L+
Sbjct: 684 LV 685
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 94/341 (27%), Positives = 152/341 (44%), Gaps = 43/341 (12%)
Query: 70 LKQLKKWNVVSEVLEWLR--IQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGY 127
L K + SEVL+ R ++ ++ ++ F +LI AYG+ G ++A + M + G
Sbjct: 370 LGAFGKNGMYSEVLKVFRGMKKAGFEPDKATFNILIEAYGRCGSSDQALSIYDGMLQAGC 429
Query: 128 APSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTY------------------ 169
P + + L+ A R GR+++AE I + S +P+ + Y
Sbjct: 430 TPDLATFNTLLAALAREGRWEHAELILDELNRSSYKPNDIAYASMLHAYANGGELEKLKE 489
Query: 170 -------------QIILKLFV----EANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIY 212
+I+LK FV + + EAE+ F+ + D F+ MI
Sbjct: 490 MVDTLHTIYVPFTKILLKTFVLVYSKCSLVDEAEDAFLAM---RHHGYLSDTSTFNAMIS 546
Query: 213 MYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSF---ETNYKEVSKIYDQMQRAGLQP 269
MY K G +KA FAL+ G++ VTYN LM E Y++ + AG P
Sbjct: 547 MYGKKGMMDKATDTFALLRSTGLEPDVVTYNCLMGMYGREGMYRKCEATLRECMAAGQTP 606
Query: 270 DVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVF 329
D+VSY +I +Y K + A +F EM+ G++P YN + + GM +A +V
Sbjct: 607 DLVSYNTVIFSYSKHGQLSSATRIFHEMVSNGIQPDSFTYNTFVGCYVNGGMFPEALSVV 666
Query: 330 KCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQD 370
K M + C PD +Y T++ AY E E+ + +K
Sbjct: 667 KHMHKTGCKPDEVTYRTLVDAYCKIGKFEEVERILKFIKSS 707
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 86/335 (25%), Positives = 153/335 (45%), Gaps = 16/335 (4%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
L+ A+GK G +++ KV M K G+ P + L+EAYGR G A +I+ M +G
Sbjct: 369 LLGAFGKNGMYSEVLKVFRGMKKAGFEPDKATFNILIEAYGRCGSSDQALSIYDGMLQAG 428
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDE-EKSPLKPDQKMFHMMIYMYKKAGGY 220
P T+ +L +++ AE +LDE +S KP+ + M++ Y G
Sbjct: 429 CTPDLATFNTLLAALAREGRWEHAE----LILDELNRSSYKPNDIAYASMLHAYANGGEL 484
Query: 221 EKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSKI------YDQMQRAGLQPDVVSY 274
EK +++ + V + + L +F Y + S + + M+ G D ++
Sbjct: 485 EKLKEMVDTLHTIYVPFTKIL---LKTFVLVYSKCSLVDEAEDAFLAMRHHGYLSDTSTF 541
Query: 275 ALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQAR-TVFKCMR 333
+I+ YGK ++A F + G+ P YN L+ + GM + T+ +CM
Sbjct: 542 NAMISMYGKKGMMDKATDTFALLRSTGLEPDVVTYNCLMGMYGREGMYRKCEATLRECMA 601
Query: 334 RDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLE 393
+ +PD+ SY T++ +Y + A + F + +G P+ TY T + Y
Sbjct: 602 AGQ-TPDLVSYNTVIFSYSKHGQLSSATRIFHEMVSNGIQPDSFTYNTFVGCYVNGGMFP 660
Query: 394 KMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFD 428
+ + + M G KP++ + T++DAY K F+
Sbjct: 661 EALSVVKHMHKTGCKPDEVTYRTLVDAYCKIGKFE 695
Score = 42.0 bits (97), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 38/71 (53%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
+ Y G F +A V+ M+K G P V++ L++AY + G+++ E I + ++SS
Sbjct: 649 FVGCYVNGGMFPEALSVVKHMHKTGCKPDEVTYRTLVDAYCKIGKFEEVERILKFIKSSD 708
Query: 162 PRPSALTYQII 172
P S Y+ I
Sbjct: 709 PNFSKAAYRRI 719
>gi|15242557|ref|NP_195906.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75181167|sp|Q9LYZ9.1|PP362_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g02860
gi|7413561|emb|CAB86040.1| putative protein [Arabidopsis thaliana]
gi|332003145|gb|AED90528.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 819
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 113/428 (26%), Positives = 207/428 (48%), Gaps = 27/428 (6%)
Query: 63 VLGTLVRLKQLKKWNVVSEVLEWLRIQSWWDFNEM----DFLMLITAYGKQGDFNKAEKV 118
+L L L KK+++ +W Q D+ M ++I+ GK+G + A +
Sbjct: 138 LLAFLKGLGFHKKFDLALRAFDWFMKQK--DYQSMLDNSVVAIIISMLGKEGRVSSAANM 195
Query: 119 LSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVE 178
+ + + G++ V S+T+L+ A+ GRY+ A +F++M+ G +P+ +TY +IL +F
Sbjct: 196 FNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNVFKKMEEDGCKPTLITYNVILNVF-- 253
Query: 179 ANKFKEAEEVFMTLLDEEKS-PLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQ 237
K +L+++ KS + PD ++ +I K+ +++A ++F M G
Sbjct: 254 -GKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSY 312
Query: 238 STVTYNSLMSF---ETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVF 294
VTYN+L+ KE K+ ++M G P +V+Y LI+AY + +EA+ +
Sbjct: 313 DKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELK 372
Query: 295 EEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNA 354
+M + G +P Y LL F +G V+ A ++F+ MR C P+IC++ + Y N
Sbjct: 373 NQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNR 432
Query: 355 SDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIF 414
K F + G P+++T+ TL+ + + ++ ++ +M+ G P + F
Sbjct: 433 GKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETF 492
Query: 415 TTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLS--------------LAKTAD 460
T++ AY + F+ A+ Y+ M G PD N +L+ LA+ D
Sbjct: 493 NTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMED 552
Query: 461 ERNEANEL 468
R + NEL
Sbjct: 553 GRCKPNEL 560
Score = 168 bits (426), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 111/388 (28%), Positives = 200/388 (51%), Gaps = 18/388 (4%)
Query: 77 NVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLS-FMNKKGYAP----SV 131
+V+SE+ E + + +E+ L + G F+ A + FM +K Y SV
Sbjct: 118 SVLSELFEPFKDKPESTSSEL--LAFLKGLGFHKKFDLALRAFDWFMKQKDYQSMLDNSV 175
Query: 132 VSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMT 191
V+ ++ G+ GR +A +F +Q G +Y ++ F + +++EA VF
Sbjct: 176 VA--IIISMLGKEGRVSSAANMFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNVFKK 233
Query: 192 LLDEEKSPLKPDQKMFHMMIYMYKKAGG-YEKARKLFALMAERGVQQSTVTYNSLMSF-- 248
+ E+ KP +++++ ++ K G + K L M G+ TYN+L++
Sbjct: 234 M---EEDGCKPTLITYNVILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLITCCK 290
Query: 249 -ETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHK 307
+ ++E ++++++M+ AG D V+Y L++ YGK+ R +EA+ V EM+ G P+
Sbjct: 291 RGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIV 350
Query: 308 AYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRL 367
YN L+ A+A GM+D+A + M PD+ +YTT+LS + A +E A F +
Sbjct: 351 TYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEM 410
Query: 368 KQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDF 427
+ G PN+ T+ IK Y +MM+I+D++ V G+ P+ + T++ +G+N
Sbjct: 411 RNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQN-GM 469
Query: 428 DSAVVW-YKEMESCGFPPDQKAKNILLS 454
DS V +KEM+ GF P+++ N L+S
Sbjct: 470 DSEVSGVFKEMKRAGFVPERETFNTLIS 497
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 105/381 (27%), Positives = 185/381 (48%), Gaps = 6/381 (1%)
Query: 92 WDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAE 151
+ ++++ + L+ YGK +A KVL+ M G++PS+V++ +L+ AY R G A
Sbjct: 310 FSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAM 369
Query: 152 AIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMI 211
+ +M G +P TY +L F A K + A +F + + KP+ F+ I
Sbjct: 370 ELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEM---RNAGCKPNICTFNAFI 426
Query: 212 YMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMS-FETNY--KEVSKIYDQMQRAGLQ 268
MY G + + K+F + G+ VT+N+L++ F N EVS ++ +M+RAG
Sbjct: 427 KMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFV 486
Query: 269 PDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTV 328
P+ ++ LI+AY + E+A+ V+ MLDAGV P YN +L A A GM +Q+ V
Sbjct: 487 PERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKV 546
Query: 329 FKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAK 388
M RC P+ +Y ++L AY N ++ + P + TL+ +K
Sbjct: 547 LAEMEDGRCKPNELTYCSLLHAYANGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSK 606
Query: 389 VNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKA 448
+ L + + +++ G P+ T +++ YG+ + A M+ GF P
Sbjct: 607 CDLLPEAERAFSELKERGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMAT 666
Query: 449 KNILLSLAKTADERNEANELL 469
N L+ + + + ++ E+L
Sbjct: 667 YNSLMYMHSRSADFGKSEEIL 687
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 100/397 (25%), Positives = 189/397 (47%), Gaps = 7/397 (1%)
Query: 76 WNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHT 135
WN ++ ++E ++ + + LIT + +A +V M G++ V++
Sbjct: 260 WNKITSLVEKMKSDGIAP-DAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYN 318
Query: 136 ALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDE 195
AL++ YG+ R K A + M +G PS +TY ++ + EA E+ + ++
Sbjct: 319 ALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEK 378
Query: 196 EKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETN---Y 252
KPD + ++ +++AG E A +F M G + + T+N+ + N +
Sbjct: 379 GT---KPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKF 435
Query: 253 KEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNIL 312
E+ KI+D++ GL PD+V++ L+ +G+ + E VF+EM AG P + +N L
Sbjct: 436 TEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTL 495
Query: 313 LDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGF 372
+ A++ G +QA TV++ M +PD+ +Y T+L+A E +EK ++
Sbjct: 496 ISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRC 555
Query: 373 VPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVV 432
PN +TY +L+ YA + M + +++ I+P + T++ K A
Sbjct: 556 KPNELTYCSLLHAYANGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAER 615
Query: 433 WYKEMESCGFPPDQKAKNILLSLAKTADERNEANELL 469
+ E++ GF PD N ++S+ +AN +L
Sbjct: 616 AFSELKERGFSPDITTLNSMVSIYGRRQMVAKANGVL 652
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 99/393 (25%), Positives = 184/393 (46%), Gaps = 7/393 (1%)
Query: 101 MLITAYGKQGD-FNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQS 159
+++ +GK G +NK ++ M G AP ++ L+ RG ++ A +F M++
Sbjct: 248 VILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKA 307
Query: 160 SGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGG 219
+G +TY +L ++ ++++ KEA +V ++ + P ++ +I Y + G
Sbjct: 308 AGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMV---LNGFSPSIVTYNSLISAYARDGM 364
Query: 220 YEKARKLFALMAERGVQQSTVTYNSLMS-FETNYKEVS--KIYDQMQRAGLQPDVVSYAL 276
++A +L MAE+G + TY +L+S FE K S I+++M+ AG +P++ ++
Sbjct: 365 LDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNA 424
Query: 277 LINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDR 336
I YG + E + +F+E+ G+ P +N LL F +GM + VFK M+R
Sbjct: 425 FIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAG 484
Query: 337 CSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMM 396
P+ ++ T++SAY E A +RR+ G P++ TY T++ A+ E+
Sbjct: 485 FVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSE 544
Query: 397 EIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLA 456
++ +M KPN+ + +++ AY K+ +E+ S P L+ +
Sbjct: 545 KVLAEMEDGRCKPNELTYCSLLHAYANGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVC 604
Query: 457 KTADERNEANELLGNFNHPNNEPGINGLSISVD 489
D EA P I L+ V
Sbjct: 605 SKCDLLPEAERAFSELKERGFSPDITTLNSMVS 637
Score = 141 bits (356), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 87/381 (22%), Positives = 170/381 (44%), Gaps = 41/381 (10%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N F I YG +G F + K+ +N G +P +V+ L+ +G+ G +F
Sbjct: 418 NICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVF 477
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
+ M+ +G P T+ ++ + F++A V+ +LD + + PD ++ ++
Sbjct: 478 KEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLD---AGVTPDLSTYNTVLAAL 534
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVS------------------ 256
+ G +E++ K+ A M + + + +TY SL+ N KE+
Sbjct: 535 ARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEIGLMHSLAEEVYSGVIEPRA 594
Query: 257 --------------------KIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEE 296
+ + +++ G PD+ + +++ YG+ + +A V +
Sbjct: 595 VLLKTLVLVCSKCDLLPEAERAFSELKERGFSPDITTLNSMVSIYGRRQMVAKANGVLDY 654
Query: 297 MLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASD 356
M + G P+ YN L+ + S ++ + + + PDI SY T++ AY +
Sbjct: 655 MKERGFTPSMATYNSLMYMHSRSADFGKSEEILREILAKGIKPDIISYNTVIYAYCRNTR 714
Query: 357 MEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTT 416
M A + F ++ G VP+VITY T I YA + E+ + + M +G +PNQ + +
Sbjct: 715 MRDASRIFSEMRNSGIVPDVITYNTFIGSYAADSMFEEAIGVVRYMIKHGCRPNQNTYNS 774
Query: 417 IMDAYGKNKDFDSAVVWYKEM 437
I+D Y K D A ++ +++
Sbjct: 775 IVDGYCKLNRKDEAKLFVEDL 795
>gi|357509703|ref|XP_003625140.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355500155|gb|AES81358.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 855
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 105/405 (25%), Positives = 199/405 (49%), Gaps = 19/405 (4%)
Query: 87 RIQSW-WDFNEMDFLM-------------LITAYGKQGDFNKAEKVLSFMNKKGYAPSVV 132
R W W N MD ++ LI A G G++ +A V M G P +V
Sbjct: 197 RAGQWRWAMNIMDDMLRAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVGPDLV 256
Query: 133 SHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTL 192
+H ++ A+ G +Y A + F ++ + RP T+ II+ V+ ++ +A ++F ++
Sbjct: 257 THNIMLTAFKSGTQYSKALSYFELIKGTHIRPDTTTHNIIIHCLVKLKQYDKAVDIFNSM 316
Query: 193 LDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLM---SFE 249
E+KS PD F MI++Y G E F +M G++ + V+YN+L+ +
Sbjct: 317 -KEKKSECHPDVVTFTSMIHLYSVCGHIENCEAAFNMMLAEGLKPNIVSYNALLGAYAAR 375
Query: 250 TNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAY 309
E ++++++++ G +PDVVSY L+NAYG++R+ ++A +F+ + ++P +Y
Sbjct: 376 GMENEALQVFNEIKQNGFRPDVVSYTSLLNAYGRSRKPQKAREIFKMIKRNNLKPNIVSY 435
Query: 310 NILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQ 369
N L+DA+ +G+++ A + + M +D+ P++ S T+L+A + +
Sbjct: 436 NALIDAYGSNGLLEDAIEILREMEQDKIHPNVVSICTLLAACGRCGQKVKIDTVLSAAEM 495
Query: 370 DGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDS 429
G N + Y + I Y V +K +++Y+ MR IK + +T ++ K F
Sbjct: 496 RGIKLNTVAYNSAIGSYINVGEYDKAIDLYNSMRKKKIKSDSVTYTVLISGCCKMSKFGE 555
Query: 430 AVVWYKEMESCGFPPDQKA-KNILLSLAKTADERNEANELLGNFN 473
A+ + +EM P ++ +I+ + +K A + E FN
Sbjct: 556 ALSFMEEMMHLKLPMSKEVYSSIICAYSKQASALGQIIEAESTFN 600
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 95/347 (27%), Positives = 170/347 (48%), Gaps = 8/347 (2%)
Query: 82 VLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAY 141
V W++ Q + + M+I + + ++A + M K P ++ AL+ A+
Sbjct: 136 VFSWMKNQKNYCARTDIYNMMIRLHARHNRTDQARGLFFEMQKCRCKPDAETYNALINAH 195
Query: 142 GRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLK 201
GR G+++ A I M + PS TY ++ + +KEA V + D + +
Sbjct: 196 GRAGQWRWAMNIMDDMLRAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTD---NGVG 252
Query: 202 PDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSK---I 258
PD ++M+ +K Y KA F L+ ++ T T+N ++ K+ K I
Sbjct: 253 PDLVTHNIMLTAFKSGTQYSKALSYFELIKGTHIRPDTTTHNIIIHCLVKLKQYDKAVDI 312
Query: 259 YDQM--QRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAF 316
++ M +++ PDVV++ +I+ Y E A F ML G++P +YN LL A+
Sbjct: 313 FNSMKEKKSECHPDVVTFTSMIHLYSVCGHIENCEAAFNMMLAEGLKPNIVSYNALLGAY 372
Query: 317 AISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNV 376
A GM ++A VF ++++ PD+ SYT++L+AY + + A + F+ +K++ PN+
Sbjct: 373 AARGMENEALQVFNEIKQNGFRPDVVSYTSLLNAYGRSRKPQKAREIFKMIKRNNLKPNI 432
Query: 377 ITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGK 423
++Y LI Y LE +EI +M + I PN T++ A G+
Sbjct: 433 VSYNALIDAYGSNGLLEDAIEILREMEQDKIHPNVVSICTLLAACGR 479
Score = 138 bits (348), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 91/351 (25%), Positives = 176/351 (50%), Gaps = 10/351 (2%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + + L+ AY +G N+A +V + + + G+ P VVS+T+L+ AYGR + + A IF
Sbjct: 361 NIVSYNALLGAYAARGMENEALQVFNEIKQNGFRPDVVSYTSLLNAYGRSRKPQKAREIF 420
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
+ ++ + +P+ ++Y ++ + ++A E+ L + E+ + P+ ++
Sbjct: 421 KMIKRNNLKPNIVSYNALIDAYGSNGLLEDAIEI---LREMEQDKIHPNVVSICTLLAAC 477
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSK---IYDQMQRAGLQPDV 271
+ G K + + RG++ +TV YNS + N E K +Y+ M++ ++ D
Sbjct: 478 GRCGQKVKIDTVLSAAEMRGIKLNTVAYNSAIGSYINVGEYDKAIDLYNSMRKKKIKSDS 537
Query: 272 VSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAIS----GMVDQART 327
V+Y +LI+ K + EAL+ EEM+ + + + Y+ ++ A++ G + +A +
Sbjct: 538 VTYTVLISGCCKMSKFGEALSFMEEMMHLKLPMSKEVYSSIICAYSKQASALGQIIEAES 597
Query: 328 VFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYA 387
F M+ CSPD+ +YT ML AY A E F ++++ + I L++ +
Sbjct: 598 TFNLMKSLGCSPDVVTYTAMLDAYNAAEKWEKLYALFEEMEENDVKLDTIACAALMRAFN 657
Query: 388 KVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEME 438
K +++ + MR I + TIF ++ A G D+ +AV K ME
Sbjct: 658 KGGQPGRVLSLAQSMREKDIPLSDTIFFEMVSACGLLHDWKTAVDMIKYME 708
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 74/317 (23%), Positives = 158/317 (49%), Gaps = 12/317 (3%)
Query: 169 YQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFA 228
Y ++++L N+ +A +F + +K KPD + ++ +I + +AG + A +
Sbjct: 153 YNMMIRLHARHNRTDQARGLFFEM---QKCRCKPDAETYNALINAHGRAGQWRWAMNIMD 209
Query: 229 LMAERGVQQSTVTYNSLMSF---ETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKAR 285
M + S TYN+L++ N+KE + +M G+ PD+V++ +++ A+
Sbjct: 210 DMLRAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNIMLTAFKSGT 269
Query: 286 REEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMR--RDRCSPDICS 343
+ +AL+ FE + +RP +NI++ D+A +F M+ + C PD+ +
Sbjct: 270 QYSKALSYFELIKGTHIRPDTTTHNIIIHCLVKLKQYDKAVDIFNSMKEKKSECHPDVVT 329
Query: 344 YTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMR 403
+T+M+ Y +E E F + +G PN+++Y L+ YA + ++++++++
Sbjct: 330 FTSMIHLYSVCGHIENCEAAFNMMLAEGLKPNIVSYNALLGAYAARGMENEALQVFNEIK 389
Query: 404 VNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERN 463
NG +P+ +T++++AYG+++ A +K ++ P+ + N L+ +
Sbjct: 390 QNGFRPDVVSYTSLLNAYGRSRKPQKAREIFKMIKRNNLKPNIVSYNALIDAYGSNGLLE 449
Query: 464 EANELLGNFN----HPN 476
+A E+L HPN
Sbjct: 450 DAIEILREMEQDKIHPN 466
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 76/326 (23%), Positives = 150/326 (46%), Gaps = 7/326 (2%)
Query: 169 YQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFA 228
+ +++ + + VF + +++ + D +++MMI ++ + ++AR LF
Sbjct: 117 FPFLIRELTQRGSIEHCNLVFSWMKNQKNYCARTD--IYNMMIRLHARHNRTDQARGLFF 174
Query: 229 LMAERGVQQSTVTYNSLMSFET---NYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKAR 285
M + + TYN+L++ ++ I D M RA + P +Y LINA G +
Sbjct: 175 EMQKCRCKPDAETYNALINAHGRAGQWRWAMNIMDDMLRAAIPPSRSTYNNLINACGSSG 234
Query: 286 REEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYT 345
+EAL V ++M D GV P +NI+L AF +A + F+ ++ PD ++
Sbjct: 235 NWKEALNVCKKMTDNGVGPDLVTHNIMLTAFKSGTQYSKALSYFELIKGTHIRPDTTTHN 294
Query: 346 TMLSAYVNASDMEGAEKFFRRLKQ--DGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMR 403
++ V + A F +K+ P+V+T+ ++I Y+ ++E ++ M
Sbjct: 295 IIIHCLVKLKQYDKAVDIFNSMKEKKSECHPDVVTFTSMIHLYSVCGHIENCEAAFNMML 354
Query: 404 VNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERN 463
G+KPN + ++ AY + A+ + E++ GF PD + LL+ + +
Sbjct: 355 AEGLKPNIVSYNALLGAYAARGMENEALQVFNEIKQNGFRPDVVSYTSLLNAYGRSRKPQ 414
Query: 464 EANELLGNFNHPNNEPGINGLSISVD 489
+A E+ N +P I + +D
Sbjct: 415 KAREIFKMIKRNNLKPNIVSYNALID 440
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 65/284 (22%), Positives = 128/284 (45%), Gaps = 6/284 (2%)
Query: 204 QKMFHMMIYMYKKAGGYEKARKLFALMA-ERGVQQSTVTYNSLMSFETNYKEVSK---IY 259
+K F +I + G E +F+ M ++ T YN ++ + + ++
Sbjct: 114 RKNFPFLIRELTQRGSIEHCNLVFSWMKNQKNYCARTDIYNMMIRLHARHNRTDQARGLF 173
Query: 260 DQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAIS 319
+MQ+ +PD +Y LINA+G+A + A+ + ++ML A + P+ YN L++A S
Sbjct: 174 FEMQKCRCKPDAETYNALINAHGRAGQWRWAMNIMDDMLRAAIPPSRSTYNNLINACGSS 233
Query: 320 GMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITY 379
G +A V K M + PD+ ++ ML+A+ + + A +F +K P+ T+
Sbjct: 234 GNWKEALNVCKKMTDNGVGPDLVTHNIMLTAFKSGTQYSKALSYFELIKGTHIRPDTTTH 293
Query: 380 GTLIKGYAKVNNLEKMMEIYDKM--RVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEM 437
+I K+ +K ++I++ M + + P+ FT+++ Y ++ + M
Sbjct: 294 NIIIHCLVKLKQYDKAVDIFNSMKEKKSECHPDVVTFTSMIHLYSVCGHIENCEAAFNMM 353
Query: 438 ESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGI 481
+ G P+ + N LL NEA ++ P +
Sbjct: 354 LAEGLKPNIVSYNALLGAYAARGMENEALQVFNEIKQNGFRPDV 397
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 81/378 (21%), Positives = 141/378 (37%), Gaps = 80/378 (21%)
Query: 97 MDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRR 156
+ + L+ AYG+ KA ++ + + P++VS+ AL++AYG G ++A I R
Sbjct: 398 VSYTSLLNAYGRSRKPQKAREIFKMIKRNNLKPNIVSYNALIDAYGSNGLLEDAIEILRE 457
Query: 157 MQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKK 216
M+ P+ ++ I L + + ++ L E +K + ++ I Y
Sbjct: 458 MEQDKIHPNVVS---ICTLLAACGRCGQKVKIDTVLSAAEMRGIKLNTVAYNSAIGSYIN 514
Query: 217 AGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYK----------------------- 253
G Y+KA L+ M ++ ++ +VTY L+S
Sbjct: 515 VGEYDKAIDLYNSMRKKKIKSDSVTYTVLISGCCKMSKFGEALSFMEEMMHLKLPMSKEV 574
Query: 254 -------------------EVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVF 294
E ++ M+ G PDVV+Y +++AY A + E+ A+F
Sbjct: 575 YSSIICAYSKQASALGQIIEAESTFNLMKSLGCSPDVVTYTAMLDAYNAAEKWEKLYALF 634
Query: 295 EEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRR------DRCSPDICSYTTML 348
EEM + V+ A L+ AF G + ++ + MR D ++ S +L
Sbjct: 635 EEMEENDVKLDTIACAALMRAFNKGGQPGRVLSLAQSMREKDIPLSDTIFFEMVSACGLL 694
Query: 349 SAYVNASDM-----------------------------EGAEKFFRRLKQDGFVPNVITY 379
+ A DM E K F ++ G N TY
Sbjct: 695 HDWKTAVDMIKYMEPSLPVISSGCLNLFLNSLGKSGKIEIMLKLFFKMLASGAEVNFNTY 754
Query: 380 GTLIKGYAKVNNLEKMME 397
L+K N K +E
Sbjct: 755 SILLKNLLSSGNWRKYLE 772
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 55/236 (23%), Positives = 105/236 (44%), Gaps = 16/236 (6%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVS---HTALMEAYGRG----GRY 147
+ + + +LI+ K F +A LSFM + + +S +++++ AY + G+
Sbjct: 536 DSVTYTVLISGCCKMSKFGEA---LSFMEEMMHLKLPMSKEVYSSIICAYSKQASALGQI 592
Query: 148 KNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMF 207
AE+ F M+S G P +TY +L + A K+ E+++ + E++ +K D
Sbjct: 593 IEAESTFNLMKSLGCSPDVVTYTAMLDAYNAAEKW---EKLYALFEEMEENDVKLDTIAC 649
Query: 208 HMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSKIYDQMQRAGL 267
++ + K G + L M E+ + S + ++S + D ++
Sbjct: 650 AALMRAFNKGGQPGRVLSLAQSMREKDIPLSDTIFFEMVSACGLLHDWKTAVDMIKYMEP 709
Query: 268 QPDVVSYA---LLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISG 320
V+S L +N+ GK+ + E L +F +ML +G Y+ILL SG
Sbjct: 710 SLPVISSGCLNLFLNSLGKSGKIEIMLKLFFKMLASGAEVNFNTYSILLKNLLSSG 765
>gi|218197600|gb|EEC80027.1| hypothetical protein OsI_21710 [Oryza sativa Indica Group]
Length = 694
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 116/404 (28%), Positives = 204/404 (50%), Gaps = 42/404 (10%)
Query: 115 AEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILK 174
A + LS M + G AP+V ++ L+ A GR + A + M+ +G P+A+TY ++
Sbjct: 136 ARRFLSSMLRHGVAPNVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVA 195
Query: 175 LFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERG 234
F A + AE V ++L+ EE + KP+ F+ M+ KAG E ARK+F M G
Sbjct: 196 AFCRAGELDGAERV-VSLMREEGNA-KPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREG 253
Query: 235 VQQSTVTYNSLMSFETN---YKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEAL 291
+ V+YN+L+S E ++ +M + GL PDVV++ LI+A KA E+A+
Sbjct: 254 LAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAV 313
Query: 292 AVF-----------------------------------EEMLDAGVRPTHKAYNILLDAF 316
A+ EEM G++P+ YN L++ +
Sbjct: 314 ALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGY 373
Query: 317 AISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNV 376
G +D AR + + M R PD+ +Y+T++S Y +++ A + +++ + G +P+
Sbjct: 374 CKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDA 433
Query: 377 ITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKE 436
ITY +LI+G + L E+++ M G++P++ +TT++D + K + + A+ + E
Sbjct: 434 ITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDE 493
Query: 437 MESCGFPPDQKAKNILLS-LAKTADERNEANELLGNFNHPNNEP 479
M G PD ++L++ L+K+A + EA+ LL H + P
Sbjct: 494 MIRKGVLPDVVTYSVLINGLSKSARTK-EAHRLLFKLYHEDPVP 536
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 84/365 (23%), Positives = 176/365 (48%), Gaps = 21/365 (5%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
L++ Y K G +++ V S M ++G P VV+ T+L+ A + G + A A+ +M+ G
Sbjct: 264 LLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERG 323
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
R + +T+ ++ F + +A + + + K ++P ++ +I Y K G +
Sbjct: 324 LRMNEVTFTALIDGFCKKGFLDDA---LLAVEEMRKCGIQPSVVCYNALINGYCKLGRMD 380
Query: 222 KARKLFALMAERGVQQSTVTYNSLMSFET---NYKEVSKIYDQMQRAGLQPDVVSYALLI 278
AR+L M + V+ VTY++++S N ++ +M + G+ PD ++Y+ LI
Sbjct: 381 LARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLI 440
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCS 338
+ +R +A +FE ML GV+P Y L+D G V++A ++ M R
Sbjct: 441 RGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVL 500
Query: 339 PDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTL---------------I 383
PD+ +Y+ +++ ++ + A + +L + VP+ I Y L +
Sbjct: 501 PDVVTYSVLINGLSKSARTKEAHRLLFKLYHEDPVPDNIKYDALMLCCSKAEFKSVVALL 560
Query: 384 KGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFP 443
KG+ +++ ++Y M K + ++++ ++ + + + A+ ++K+M GF
Sbjct: 561 KGFCMKGLMKEADKVYQSMLDRNWKLDGSVYSILIHGHCRGGNVRKALSFHKQMLRSGFS 620
Query: 444 PDQKA 448
P+ +
Sbjct: 621 PNSTS 625
Score = 121 bits (304), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 91/380 (23%), Positives = 168/380 (44%), Gaps = 43/380 (11%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYA-PSVVSHTALMEAYGRGGRYKNAEAI 153
N + + L+ A+ + G+ + AE+V+S M ++G A P++V+ +++ + GR + A +
Sbjct: 186 NAVTYNTLVAAFCRAGELDGAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKV 245
Query: 154 FRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYM 213
F M G P ++Y +L + + E+ VF + + L PD F +I+
Sbjct: 246 FDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEM---TQRGLVPDVVTFTSLIHA 302
Query: 214 YKKAGGYEKARKLFALMAERG-----------------------------------VQQS 238
KAG E+A L A M ERG +Q S
Sbjct: 303 TCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPS 362
Query: 239 TVTYNSLMSFETNYKEV---SKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFE 295
V YN+L++ + ++ +M+ ++PDVV+Y+ +I+ Y K + A + +
Sbjct: 363 VVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQ 422
Query: 296 EMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNAS 355
+ML GV P Y+ L+ ++ A +F+ M + PD +YTT++ +
Sbjct: 423 KMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEG 482
Query: 356 DMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFT 415
++E A + + G +P+V+TY LI G +K ++ + K+ P+ +
Sbjct: 483 NVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKEAHRLLFKLYHEDPVPDNIKYD 542
Query: 416 TIMDAYGKNKDFDSAVVWYK 435
+M K +F S V K
Sbjct: 543 ALMLCCSK-AEFKSVVALLK 561
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 79/310 (25%), Positives = 144/310 (46%), Gaps = 21/310 (6%)
Query: 94 FNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAI 153
NE+ F LI + K+G + A + M K G PSVV + AL+ Y + GR A +
Sbjct: 326 MNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLAREL 385
Query: 154 FRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYM 213
R M++ +P +TY I+ + + A ++ +L K + PD + +I
Sbjct: 386 IREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKML---KKGVLPDAITYSSLIRG 442
Query: 214 YKKAGGYEKARKLFALMAERGVQQSTVTYNSLM---SFETNYKEVSKIYDQMQRAGLQPD 270
+ A +LF M + GVQ TY +L+ E N ++ ++D+M R G+ PD
Sbjct: 443 LCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPD 502
Query: 271 VVSYALLINAYGKARREEEALAV---------------FEEMLDAGVRPTHKAYNILLDA 315
VV+Y++LIN K+ R +EA + ++ ++ + K+ LL
Sbjct: 503 VVTYSVLINGLSKSARTKEAHRLLFKLYHEDPVPDNIKYDALMLCCSKAEFKSVVALLKG 562
Query: 316 FAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPN 375
F + G++ +A V++ M D Y+ ++ + ++ A F +++ + GF PN
Sbjct: 563 FCMKGLMKEADKVYQSMLDRNWKLDGSVYSILIHGHCRGGNVRKALSFHKQMLRSGFSPN 622
Query: 376 VITYGTLIKG 385
+ +L++G
Sbjct: 623 STSTISLVRG 632
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 62/277 (22%), Positives = 110/277 (39%), Gaps = 56/277 (20%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
LI Y K G + A +++ M K P VV+++ ++ Y + G +A + ++M G
Sbjct: 369 LINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKG 428
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
P A+TY +++ E + +A E+F +L + ++PD+ + +I + K G E
Sbjct: 429 VLPDAITYSSLIRGLCEEKRLNDACELFENML---QLGVQPDEFTYTTLIDGHCKEGNVE 485
Query: 222 KARKLFALMAERGVQQSTVT-----------------------------------YNSLM 246
KA L M +GV VT Y++LM
Sbjct: 486 KALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKEAHRLLFKLYHEDPVPDNIKYDALM 545
Query: 247 ------------------SFETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREE 288
+ KE K+Y M + D Y++LI+ + +
Sbjct: 546 LCCSKAEFKSVVALLKGFCMKGLMKEADKVYQSMLDRNWKLDGSVYSILIHGHCRGGNVR 605
Query: 289 EALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQA 325
+AL+ ++ML +G P + L+ GMV +A
Sbjct: 606 KALSFHKQMLRSGFSPNSTSTISLVRGLFEEGMVVEA 642
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 46/93 (49%), Gaps = 1/93 (1%)
Query: 338 SPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMME 397
+P + +Y +L A +AS + A +F + + G PNV TY L++ LE+ +
Sbjct: 115 APSVPAYNAVLLALSDAS-LPSARRFLSSMLRHGVAPNVYTYNILVRALCARGRLEEAVG 173
Query: 398 IYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSA 430
+ MR G PN + T++ A+ + + D A
Sbjct: 174 VVGDMRGAGCAPNAVTYNTLVAAFCRAGELDGA 206
>gi|255555231|ref|XP_002518652.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223542033|gb|EEF43577.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 827
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 113/426 (26%), Positives = 208/426 (48%), Gaps = 23/426 (5%)
Query: 63 VLGTLVRLKQLKKWNVVSEVLEWLRIQSWWD--FNEMDFLMLITAYGKQGDFNKAEKVLS 120
VLG + L KK ++ V W+R + ++ N ++IT GK+G + A +L+
Sbjct: 147 VLGIIKGLGFYKKCDMAMSVFSWVREREDFESVLNCSVVAVIITMLGKEGKVSAASSILN 206
Query: 121 FMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEAN 180
+ K G+ V ++T+L+ AY GRY++A +F++M+ G +P+ +TY +IL ++
Sbjct: 207 NLRKDGFDLDVYAYTSLITAYASNGRYRDAVLVFKKMEEEGCKPTLITYNVILNVY---G 263
Query: 181 KFKEAEEVFMTLLDEEKSP-LKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQST 239
K L+ KS + PD ++ +I ++ YE+A ++F M G
Sbjct: 264 KMGMPWSKISGLVHGMKSSGVAPDDYTYNTLISCCRRGSLYEEAAQVFEEMKLSGFSPDK 323
Query: 240 VTYNSLMSF---ETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEE 296
VT+N+L+ KE ++ +M+ +G P +V+Y LI+AY + EA+ + ++
Sbjct: 324 VTFNTLLDVYGKSRRPKEAMEVLKEMEFSGFSPSIVTYNSLISAYARDGLLREAMELKDQ 383
Query: 297 MLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASD 356
M++ G++P Y LL F +GM + A +F MR C P+IC++ ++ + N
Sbjct: 384 MVEKGIKPDVFTYTTLLSGFEKAGMDEPAMRIFGEMRAAGCKPNICTFNALIKMHGNRGR 443
Query: 357 MEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTT 416
K F ++ P+++T+ TL+ + + ++ ++ +M+ G P + F T
Sbjct: 444 FAEMMKVFEEIEICNCAPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERDTFNT 503
Query: 417 IMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLS--------------LAKTADER 462
++ AY + F A+ YK M G PD + N +L+ A+ D R
Sbjct: 504 LISAYSRCGSFQQAMAVYKRMLEAGVTPDLSSYNAVLAALARGGLWEQSEKVFAEMKDGR 563
Query: 463 NEANEL 468
+ NEL
Sbjct: 564 CKPNEL 569
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 97/383 (25%), Positives = 185/383 (48%), Gaps = 7/383 (1%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
LI+ + + +A +V M G++P V+ L++ YG+ R K A + + M+ SG
Sbjct: 294 LISCCRRGSLYEEAAQVFEEMKLSGFSPDKVTFNTLLDVYGKSRRPKEAMEVLKEMEFSG 353
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
PS +TY ++ + +EA E+ ++++ +KPD + ++ ++KAG E
Sbjct: 354 FSPSIVTYNSLISAYARDGLLREAMELKDQMVEKG---IKPDVFTYTTLLSGFEKAGMDE 410
Query: 222 KARKLFALMAERGVQQSTVTYNSLMSFETN---YKEVSKIYDQMQRAGLQPDVVSYALLI 278
A ++F M G + + T+N+L+ N + E+ K++++++ PD+V++ L+
Sbjct: 411 PAMRIFGEMRAAGCKPNICTFNALIKMHGNRGRFAEMMKVFEEIEICNCAPDIVTWNTLL 470
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCS 338
+G+ + E VF+EM AG P +N L+ A++ G QA V+K M +
Sbjct: 471 AVFGQNGMDSEVSGVFKEMKRAGFVPERDTFNTLISAYSRCGSFQQAMAVYKRMLEAGVT 530
Query: 339 PDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEI 398
PD+ SY +L+A E +EK F +K PN +TY +L+ YA +E+M +
Sbjct: 531 PDLSSYNAVLAALARGGLWEQSEKVFAEMKDGRCKPNELTYCSLLHAYANSKEIERMHTL 590
Query: 399 YDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKT 458
+++ +P + T++ K ++E++ G PD N ++++
Sbjct: 591 AEEIYSGLTEPVPVLLKTLVLVNSKCDLLMETEHAFEELKKKG-SPDLSTLNAMIAIYGR 649
Query: 459 ADERNEANELLGNFNHPNNEPGI 481
+ANE+L N P +
Sbjct: 650 RQMVAKANEILNFMNESGFSPSL 672
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 119/467 (25%), Positives = 223/467 (47%), Gaps = 15/467 (3%)
Query: 13 RRKVEVFKDAADEAGKKN---WRRLMNQIEEVG---SAVAVLRSERTRGQPLPKDLVLGT 66
R V VFK +E K + ++N ++G S ++ L P D T
Sbjct: 234 RDAVLVFKKMEEEGCKPTLITYNVILNVYGKMGMPWSKISGLVHGMKSSGVAPDDYTYNT 293
Query: 67 LVRL-KQLKKWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKK 125
L+ ++ + ++V E +++ S + +++ F L+ YGK +A +VL M
Sbjct: 294 LISCCRRGSLYEEAAQVFEEMKL-SGFSPDKVTFNTLLDVYGKSRRPKEAMEVLKEMEFS 352
Query: 126 GYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEA 185
G++PS+V++ +L+ AY R G + A + +M G +P TY +L F +A + A
Sbjct: 353 GFSPSIVTYNSLISAYARDGLLREAMELKDQMVEKGIKPDVFTYTTLLSGFEKAGMDEPA 412
Query: 186 EEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSL 245
+F + + KP+ F+ +I M+ G + + K+F + VT+N+L
Sbjct: 413 MRIFGEM---RAAGCKPNICTFNALIKMHGNRGRFAEMMKVFEEIEICNCAPDIVTWNTL 469
Query: 246 MS-FETNY--KEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGV 302
++ F N EVS ++ +M+RAG P+ ++ LI+AY + ++A+AV++ ML+AGV
Sbjct: 470 LAVFGQNGMDSEVSGVFKEMKRAGFVPERDTFNTLISAYSRCGSFQQAMAVYKRMLEAGV 529
Query: 303 RPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEK 362
P +YN +L A A G+ +Q+ VF M+ RC P+ +Y ++L AY N+ ++E
Sbjct: 530 TPDLSSYNAVLAALARGGLWEQSEKVFAEMKDGRCKPNELTYCSLLHAYANSKEIERMHT 589
Query: 363 FFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYG 422
+ P + TL+ +K + L + +++++ G P+ + ++ YG
Sbjct: 590 LAEEIYSGLTEPVPVLLKTLVLVNSKCDLLMETEHAFEELKKKG-SPDLSTLNAMIAIYG 648
Query: 423 KNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELL 469
+ + A M GF P N L+ + ++ + E+L
Sbjct: 649 RRQMVAKANEILNFMNESGFSPSLATYNSLMYMHSRSENFERSEEVL 695
Score = 125 bits (315), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 87/381 (22%), Positives = 170/381 (44%), Gaps = 42/381 (11%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N F LI +G +G F + KV + AP +V+ L+ +G+ G +F
Sbjct: 427 NICTFNALIKMHGNRGRFAEMMKVFEEIEICNCAPDIVTWNTLLAVFGQNGMDSEVSGVF 486
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
+ M+ +G P T+ ++ + F++A V+ +L+ + + PD ++ ++
Sbjct: 487 KEMKRAGFVPERDTFNTLISAYSRCGSFQQAMAVYKRMLE---AGVTPDLSSYNAVLAAL 543
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSKI---------------- 258
+ G +E++ K+FA M + + + +TY SL+ N KE+ ++
Sbjct: 544 ARGGLWEQSEKVFAEMKDGRCKPNELTYCSLLHAYANSKEIERMHTLAEEIYSGLTEPVP 603
Query: 259 ----------------------YDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEE 296
++++++ G PD+ + +I YG+ + +A +
Sbjct: 604 VLLKTLVLVNSKCDLLMETEHAFEELKKKG-SPDLSTLNAMIAIYGRRQMVAKANEILNF 662
Query: 297 MLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASD 356
M ++G P+ YN L+ + S +++ V K + PD+ SY T++ AY
Sbjct: 663 MNESGFSPSLATYNSLMYMHSRSENFERSEEVLKEILAKGLKPDLISYNTVIFAYCRNGR 722
Query: 357 MEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTT 416
M+ A + F +K G VP+VITY T + YA + E + + M +G K NQ + +
Sbjct: 723 MKDASRIFSYMKTYGLVPDVITYNTFVASYAADSLFEDAIGVVRYMIKHGCKRNQNTYNS 782
Query: 417 IMDAYGKNKDFDSAVVWYKEM 437
I+D Y K+ A+++ +
Sbjct: 783 IVDGYCKHSRRADAIMFVSSL 803
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 79/305 (25%), Positives = 135/305 (44%), Gaps = 34/305 (11%)
Query: 99 FLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQ 158
F LI+AY + G F +A V M + G P + S+ A++ A RGG ++ +E +F M+
Sbjct: 501 FNTLISAYSRCGSFQQAMAVYKRMLEAGVTPDLSSYNAVLAALARGGLWEQSEKVFAEMK 560
Query: 159 SSGPRPSALTYQIILKLFVEANKFKE----AEEVFMTL---------------------- 192
+P+ LTY +L + + + + AEE++ L
Sbjct: 561 DGRCKPNELTYCSLLHAYANSKEIERMHTLAEEIYSGLTEPVPVLLKTLVLVNSKCDLLM 620
Query: 193 -----LDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMS 247
+E K PD + MI +Y + KA ++ M E G S TYNSLM
Sbjct: 621 ETEHAFEELKKKGSPDLSTLNAMIAIYGRRQMVAKANEILNFMNESGFSPSLATYNSLMY 680
Query: 248 FET---NYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRP 304
+ N++ ++ ++ GL+PD++SY +I AY + R ++A +F M G+ P
Sbjct: 681 MHSRSENFERSEEVLKEILAKGLKPDLISYNTVIFAYCRNGRMKDASRIFSYMKTYGLVP 740
Query: 305 THKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFF 364
YN + ++A + + A V + M + C + +Y +++ Y S A F
Sbjct: 741 DVITYNTFVASYAADSLFEDAIGVVRYMIKHGCKRNQNTYNSIVDGYCKHSRRADAIMFV 800
Query: 365 RRLKQ 369
L Q
Sbjct: 801 SSLNQ 805
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 72/279 (25%), Positives = 128/279 (45%), Gaps = 10/279 (3%)
Query: 213 MYKKAGGYEK---ARKLFALMAERGVQQSTVTYN------SLMSFETNYKEVSKIYDQMQ 263
+ K G Y+K A +F+ + ER +S + + +++ E S I + ++
Sbjct: 150 IIKGLGFYKKCDMAMSVFSWVREREDFESVLNCSVVAVIITMLGKEGKVSAASSILNNLR 209
Query: 264 RAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMV- 322
+ G DV +Y LI AY R +A+ VF++M + G +PT YN++L+ + GM
Sbjct: 210 KDGFDLDVYAYTSLITAYASNGRYRDAVLVFKKMEEEGCKPTLITYNVILNVYGKMGMPW 269
Query: 323 DQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTL 382
+ + M+ +PD +Y T++S S E A + F +K GF P+ +T+ TL
Sbjct: 270 SKISGLVHGMKSSGVAPDDYTYNTLISCCRRGSLYEEAAQVFEEMKLSGFSPDKVTFNTL 329
Query: 383 IKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGF 442
+ Y K ++ ME+ +M +G P+ + +++ AY ++ A+ +M G
Sbjct: 330 LDVYGKSRRPKEAMEVLKEMEFSGFSPSIVTYNSLISAYARDGLLREAMELKDQMVEKGI 389
Query: 443 PPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGI 481
PD LLS + A A + G +P I
Sbjct: 390 KPDVFTYTTLLSGFEKAGMDEPAMRIFGEMRAAGCKPNI 428
>gi|224079730|ref|XP_002305930.1| predicted protein [Populus trichocarpa]
gi|222848894|gb|EEE86441.1| predicted protein [Populus trichocarpa]
Length = 470
Score = 179 bits (455), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 109/409 (26%), Positives = 195/409 (47%), Gaps = 35/409 (8%)
Query: 97 MDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRR 156
+ F LI GK G F +A ++ M +G P ++T ++ + G A +F++
Sbjct: 46 VTFTTLINGLGKVGKFAQAVELFDDMVARGCQPDDYTYTTIINGLCKIGETALAAGLFKK 105
Query: 157 MQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSP----------------- 199
M+ +G + + +TY ++ + + EA ++F + ++ SP
Sbjct: 106 MEEAGCQLNVVTYSTLIHSLCKYRRVNEALDIFSYMKAKDISPTIFTYTSLIQGLCNFSR 165
Query: 200 ---------------LKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNS 244
+ P+ F++++ + K G A + M E GV+ VTYNS
Sbjct: 166 WKEASALLNEMTSLNIMPNVVTFNVLVDTFCKEGKVLAAEGVLKTMTEMGVEPDVVTYNS 225
Query: 245 LM---SFETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAG 301
LM S T E K++D M G +PDV SY++LIN Y KA+R +EA +F EM+ G
Sbjct: 226 LMYGYSMWTEVVEARKLFDVMITKGCKPDVFSYSILINGYCKAKRIDEAKQLFNEMIHQG 285
Query: 302 VRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAE 361
P + +YN L+ G + +A+ +FK M + P++ +Y +L + + A
Sbjct: 286 STPNNVSYNTLIHGLCQLGRLREAQDLFKNMHTNGNLPNLYTYAILLDGFCKQGYLGKAF 345
Query: 362 KFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAY 421
+ FR ++ PN++ Y L+ K NL+ E++ ++ V G++PN I+TTI++
Sbjct: 346 RLFRAMQSTYLKPNLVMYNILVNAMCKSGNLKDARELFSELFVIGLQPNVQIYTTIINGL 405
Query: 422 GKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLG 470
K D A+ ++ ME G PPD+ + N+++ + + A L+G
Sbjct: 406 CKEGLLDEALEAFRNMEDDGCPPDEFSYNVIIRGFLQHKDESRAVHLIG 454
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 100/427 (23%), Positives = 175/427 (40%), Gaps = 50/427 (11%)
Query: 122 MNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANK 181
M G +P+ + L+ + + R ++ + G +P+ +T+ ++ + K
Sbjct: 1 MELAGLSPNTCTLNILINCFCQLQRVDLGFSVLAKGIKLGLQPTIVTFTTLINGLGKVGK 60
Query: 182 FKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVT 241
F +A E+F D +PD + +I K G A LF M E G Q + VT
Sbjct: 61 FAQAVELFD---DMVARGCQPDDYTYTTIINGLCKIGETALAAGLFKKMEEAGCQLNVVT 117
Query: 242 YNSLMSFETNYKEVSK---IYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEML 298
Y++L+ Y+ V++ I+ M+ + P + +Y LI R +EA A+ EM
Sbjct: 118 YSTLIHSLCKYRRVNEALDIFSYMKAKDISPTIFTYTSLIQGLCNFSRWKEASALLNEMT 177
Query: 299 DAGVRPTHKAYNILLDAFAISGM-----------------------------------VD 323
+ P +N+L+D F G V
Sbjct: 178 SLNIMPNVVTFNVLVDTFCKEGKVLAAEGVLKTMTEMGVEPDVVTYNSLMYGYSMWTEVV 237
Query: 324 QARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLI 383
+AR +F M C PD+ SY+ +++ Y A ++ A++ F + G PN ++Y TLI
Sbjct: 238 EARKLFDVMITKGCKPDVFSYSILINGYCKAKRIDEAKQLFNEMIHQGSTPNNVSYNTLI 297
Query: 384 KGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFP 443
G ++ L + +++ M NG PN + ++D + K A ++ M+S
Sbjct: 298 HGLCQLGRLREAQDLFKNMHTNGNLPNLYTYAILLDGFCKQGYLGKAFRLFRAMQSTYLK 357
Query: 444 PDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPG-------INGLSIS--VDEEDDD 494
P+ NIL++ + +A EL +P INGL +DE +
Sbjct: 358 PNLVMYNILVNAMCKSGNLKDARELFSELFVIGLQPNVQIYTTIINGLCKEGLLDEALEA 417
Query: 495 DDDDEDD 501
+ EDD
Sbjct: 418 FRNMEDD 424
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 71/282 (25%), Positives = 136/282 (48%), Gaps = 6/282 (2%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + F +L+ + K+G AE VL M + G P VV++ +LM Y A +F
Sbjct: 184 NVVTFNVLVDTFCKEGKVLAAEGVLKTMTEMGVEPDVVTYNSLMYGYSMWTEVVEARKLF 243
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
M + G +P +Y I++ + +A + EA+++F ++ + +P + ++ +I+
Sbjct: 244 DVMITKGCKPDVFSYSILINGYCKAKRIDEAKQLFNEMIHQGSTP---NNVSYNTLIHGL 300
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSK---IYDQMQRAGLQPDV 271
+ G +A+ LF M G + TY L+ + K ++ MQ L+P++
Sbjct: 301 CQLGRLREAQDLFKNMHTNGNLPNLYTYAILLDGFCKQGYLGKAFRLFRAMQSTYLKPNL 360
Query: 272 VSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKC 331
V Y +L+NA K+ ++A +F E+ G++P + Y +++ G++D+A F+
Sbjct: 361 VMYNILVNAMCKSGNLKDARELFSELFVIGLQPNVQIYTTIINGLCKEGLLDEALEAFRN 420
Query: 332 MRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFV 373
M D C PD SY ++ ++ D A ++ GF+
Sbjct: 421 MEDDGCPPDEFSYNVIIRGFLQHKDESRAVHLIGEMRDRGFI 462
>gi|225437600|ref|XP_002271180.1| PREDICTED: pentatricopeptide repeat-containing protein At2g31400,
chloroplastic [Vitis vinifera]
Length = 867
Score = 179 bits (455), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 116/408 (28%), Positives = 209/408 (51%), Gaps = 11/408 (2%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
+I+ G+ G A+ V +GY +V + +AL+ AYGR G A +F M+SSG
Sbjct: 191 MISILGRLGQVELAKNVFETALNEGYGNTVYAFSALISAYGRSGYCDEAIKVFETMKSSG 250
Query: 162 PRPSALTYQIILKLFVEAN-KFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGY 220
+P+ +TY ++ + F A E+F +L ++ ++PD+ F+ ++ + + G +
Sbjct: 251 LKPNLVTYNAVIDACGKGGVDFNRAAEIFDEML---RNGVQPDRITFNSLLAVCGRGGLW 307
Query: 221 EKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVS---KIYDQMQRAGLQPDVVSYALL 277
E AR LF+ M RG++Q TYN+L+ ++ +I +M R + P+VV+Y+ +
Sbjct: 308 EAARNLFSEMLYRGIEQDIFTYNTLLDAVCKGGQMDLAFQIMSEMPRKHIMPNVVTYSTV 367
Query: 278 INAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRC 337
I+ Y KA R +EAL +F EM A + +YN LL +A G ++A V K M
Sbjct: 368 IDGYAKAGRLDEALNLFNEMKFASIGLDRVSYNTLLSIYAKLGRFEEALNVCKEMESSGI 427
Query: 338 SPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMME 397
D +Y +L Y E ++ F +K + PN++TY TLI Y+K ++ ME
Sbjct: 428 KKDAVTYNALLGGYGKQGKYEEVKRVFEEMKAERIFPNLLTYSTLIDVYSKGGLYQEAME 487
Query: 398 IYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAK 457
++ + + G+K + +++ ++DA KN +SAV + EM G P+ N ++
Sbjct: 488 VFREFKKAGLKADVVLYSALIDALCKNGLVESAVSFLDEMTKEGIRPNVVTYNSIID--- 544
Query: 458 TADERNEANELLGNFNHPNNEPGINGLSISVDEEDDDDDDDEDDDDNI 505
A R+ + E + + + N ++ S+ V E+ + + + +D+ I
Sbjct: 545 -AFGRSGSAECVIDPPYETNVSKMSSSSLKVVEDATESEVGDKEDNQI 591
Score = 92.4 bits (228), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 87/353 (24%), Positives = 156/353 (44%), Gaps = 61/353 (17%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + + +I Y K G ++A + + M VS+ L+ Y + GR++ A +
Sbjct: 360 NVVTYSTVIDGYAKAGRLDEALNLFNEMKFASIGLDRVSYNTLLSIYAKLGRFEEALNVC 419
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
+ M+SSG + A+TY +L + + K++E + VF + E + P+ + +I +Y
Sbjct: 420 KEMESSGIKKDAVTYNALLGGYGKQGKYEEVKRVFEEMKAER---IFPNLLTYSTLIDVY 476
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSKIYDQMQRAGLQPDVVSY 274
K G Y++A ++F + ++AGL+ DVV Y
Sbjct: 477 SKGGLYQEAMEVF--------------------------------REFKKAGLKADVVLY 504
Query: 275 ALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRR 334
+ LI+A K E A++ +EM G+RP YN ++DAF SG +
Sbjct: 505 SALIDALCKNGLVESAVSFLDEMTKEGIRPNVVTYNSIIDAFGRSGSAE----------- 553
Query: 335 DRCSPDICSYTTMLSAYVNAS--DMEGAEKFFRRLKQDGFVPNVITYGTLI---KGYAKV 389
C D Y T +S ++S +E A + K+D + + +G L +AK
Sbjct: 554 --CVIDP-PYETNVSKMSSSSLKVVEDATESEVGDKEDNQIIKI--FGQLAAEKTCHAKK 608
Query: 390 NNLEK-----MMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEM 437
N + ++ ++ KM IKPN F+ I++A + F+ A + +E+
Sbjct: 609 ENRGRQEILCILAVFHKMHELDIKPNVVTFSAILNACSRCNSFEDASMLLEEL 661
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 67/282 (23%), Positives = 124/282 (43%), Gaps = 45/282 (15%)
Query: 94 FNEMDFL----------MLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGR 143
FNEM F L++ Y K G F +A V M G V++ AL+ YG+
Sbjct: 384 FNEMKFASIGLDRVSYNTLLSIYAKLGRFEEALNVCKEMESSGIKKDAVTYNALLGGYGK 443
Query: 144 GGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPD 203
G+Y+ + +F M++ P+ LTY ++ ++ + ++EA EVF +K+ LK D
Sbjct: 444 QGKYEEVKRVFEEMKAERIFPNLLTYSTLIDVYSKGGLYQEAMEVFREF---KKAGLKAD 500
Query: 204 QKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLM---------------SF 248
++ +I K G E A M + G++ + VTYNS++ +
Sbjct: 501 VVLYSALIDALCKNGLVESAVSFLDEMTKEGIRPNVVTYNSIIDAFGRSGSAECVIDPPY 560
Query: 249 ETNYKEVSKIYDQMQRAGLQPDVVSYA--LLINAYGK--------ARREEEA-------L 291
ETN ++S ++ + +V +I +G+ A++E L
Sbjct: 561 ETNVSKMSSSSLKVVEDATESEVGDKEDNQIIKIFGQLAAEKTCHAKKENRGRQEILCIL 620
Query: 292 AVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMR 333
AVF +M + ++P ++ +L+A + + A + + +R
Sbjct: 621 AVFHKMHELDIKPNVVTFSAILNACSRCNSFEDASMLLEELR 662
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 56/113 (49%), Gaps = 1/113 (0%)
Query: 345 TTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRV 404
+ M+S +E A+ F +G+ V + LI Y + ++ +++++ M+
Sbjct: 189 SAMISILGRLGQVELAKNVFETALNEGYGNTVYAFSALISAYGRSGYCDEAIKVFETMKS 248
Query: 405 NGIKPNQTIFTTIMDAYGKNK-DFDSAVVWYKEMESCGFPPDQKAKNILLSLA 456
+G+KPN + ++DA GK DF+ A + EM G PD+ N LL++
Sbjct: 249 SGLKPNLVTYNAVIDACGKGGVDFNRAAEIFDEMLRNGVQPDRITFNSLLAVC 301
>gi|449438016|ref|XP_004136786.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g41720-like [Cucumis sativus]
Length = 707
Score = 179 bits (454), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 95/339 (28%), Positives = 174/339 (51%), Gaps = 4/339 (1%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
LI A G G++ +A +V M G P +V+H ++ AY G +Y A + F M+ +
Sbjct: 106 LINACGSCGNWREALRVCKKMTDNGVGPDLVTHNIVLSAYKSGAQYSKALSYFELMKGTN 165
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
RP T I++ ++ ++ +A E+F + + E++S +PD F +I++Y G E
Sbjct: 166 IRPDTTTLNIVIHCLIKVKQYGQAIEIFSS-MREKRSECRPDVVTFTSIIHLYSVRGQIE 224
Query: 222 KARKLFALMAERGVQQSTVTYNSLMSFETNY---KEVSKIYDQMQRAGLQPDVVSYALLI 278
+ +F+ M G++ + V+YN+L+S ++ KE ++D+M+R+G PDVVSY LI
Sbjct: 225 DCKAVFSTMLAEGIKPNIVSYNALISAYASHGMDKEAFSVFDEMKRSGFCPDVVSYTSLI 284
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCS 338
+ +G++++ A VF+ M +P +YN L+DA+ +G + QA + + M +D
Sbjct: 285 STFGRSQQPARAREVFDMMKRNKCKPNLVSYNALMDAYGSNGYLPQAVDILREMEQDGIH 344
Query: 339 PDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEI 398
P++ S T+L+A + + G N I + I Y + EK + +
Sbjct: 345 PNVVSICTLLAACGRFGQKVNIDSVLSAAELRGIHLNTIACNSAIGSYMNIGEYEKAINL 404
Query: 399 YDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEM 437
Y M KP+ FT ++ + ++ A+ ++KEM
Sbjct: 405 YRSMENKTTKPDSVTFTILISGCCRMSKYEEALCFFKEM 443
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 95/359 (26%), Positives = 174/359 (48%), Gaps = 8/359 (2%)
Query: 70 LKQLKKWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAP 129
L Q+ +V +W++ Q + + M+I + + ++A + M K P
Sbjct: 4 LTQIGSIEHCVQVFDWMKNQRNYCARNDIYNMMIRLHARHNRIDQARGLFFEMQKWRCKP 63
Query: 130 SVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVF 189
V ++ AL+ A+GR G+++ A I M + PS T+ ++ ++EA V
Sbjct: 64 DVETYNALINAHGRAGQWRWATNIMEDMLRAAIPPSRSTFNNLINACGSCGNWREALRVC 123
Query: 190 MTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFE 249
+ D + + PD ++++ YK Y KA F LM ++ T T N ++
Sbjct: 124 KKMTD---NGVGPDLVTHNIVLSAYKSGAQYSKALSYFELMKGTNIRPDTTTLNIVIHCL 180
Query: 250 T---NYKEVSKIYDQM--QRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRP 304
Y + +I+ M +R+ +PDVV++ +I+ Y + E+ AVF ML G++P
Sbjct: 181 IKVKQYGQAIEIFSSMREKRSECRPDVVTFTSIIHLYSVRGQIEDCKAVFSTMLAEGIKP 240
Query: 305 THKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFF 364
+YN L+ A+A GM +A +VF M+R PD+ SYT+++S + + A + F
Sbjct: 241 NIVSYNALISAYASHGMDKEAFSVFDEMKRSGFCPDVVSYTSLISTFGRSQQPARAREVF 300
Query: 365 RRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGK 423
+K++ PN+++Y L+ Y L + ++I +M +GI PN T++ A G+
Sbjct: 301 DMMKRNKCKPNLVSYNALMDAYGSNGYLPQAVDILREMEQDGIHPNVVSICTLLAACGR 359
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 88/402 (21%), Positives = 188/402 (46%), Gaps = 15/402 (3%)
Query: 37 QIEEVGSAVAVLRSER-TRGQPLPKDLVLGTLVRL----KQLKKWNVVSEVLEWLRIQSW 91
++++ G A+ + S R R + P + +++ L Q++ V + I+
Sbjct: 182 KVKQYGQAIEIFSSMREKRSECRPDVVTFTSIIHLYSVRGQIEDCKAVFSTMLAEGIKP- 240
Query: 92 WDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAE 151
N + + LI+AY G +A V M + G+ P VVS+T+L+ +GR + A
Sbjct: 241 ---NIVSYNALISAYASHGMDKEAFSVFDEMKRSGFCPDVVSYTSLISTFGRSQQPARAR 297
Query: 152 AIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMI 211
+F M+ + +P+ ++Y ++ + +A ++ L + E+ + P+ ++
Sbjct: 298 EVFDMMKRNKCKPNLVSYNALMDAYGSNGYLPQAVDI---LREMEQDGIHPNVVSICTLL 354
Query: 212 YMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETN---YKEVSKIYDQMQRAGLQ 268
+ G + + RG+ +T+ NS + N Y++ +Y M+ +
Sbjct: 355 AACGRFGQKVNIDSVLSAAELRGIHLNTIACNSAIGSYMNIGEYEKAINLYRSMENKTTK 414
Query: 269 PDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTV 328
PD V++ +LI+ + + EEAL F+EMLD + + + Y+ ++ A++ G + +A ++
Sbjct: 415 PDSVTFTILISGCCRMSKYEEALCFFKEMLDLRIPLSSEIYSSMICAYSKQGQLVKAESL 474
Query: 329 FKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAK 388
F ++ C PD+ +YT M++AY + E ++ ++ + + I L+K + K
Sbjct: 475 FNSLKGSGCCPDLVTYTAMINAYSASEMWEKVCALYQEMEANNIQLDSIACSALMKAFNK 534
Query: 389 VNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSA 430
N ++ + + M+ GI N F ++ A +D+ A
Sbjct: 535 GNQASNVLILAEIMKEKGIPFNDANFFEMLSACSILRDWRKA 576
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 79/326 (24%), Positives = 145/326 (44%), Gaps = 43/326 (13%)
Query: 169 YQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFA 228
Y ++++L N+ +A +F + +K KPD + ++ +I + +AG + A +
Sbjct: 33 YNMMIRLHARHNRIDQARGLF---FEMQKWRCKPDVETYNALINAHGRAGQWRWATNIME 89
Query: 229 LMAERGVQQSTVTYNSLMSFET---NYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKAR 285
M + S T+N+L++ N++E ++ +M G+ PD+V++ ++++AY
Sbjct: 90 DMLRAAIPPSRSTFNNLINACGSCGNWREALRVCKKMTDNGVGPDLVTHNIVLSAYKSGA 149
Query: 286 REEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMR--RDRCSPDICS 343
+ +AL+ FE M +RP NI++ QA +F MR R C PD+ +
Sbjct: 150 QYSKALSYFELMKGTNIRPDTTTLNIVIHCLIKVKQYGQAIEIFSSMREKRSECRPDVVT 209
Query: 344 YTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYA---------------- 387
+T+++ Y +E + F + +G PN+++Y LI YA
Sbjct: 210 FTSIIHLYSVRGQIEDCKAVFSTMLAEGIKPNIVSYNALISAYASHGMDKEAFSVFDEMK 269
Query: 388 -------------------KVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFD 428
+ + E++D M+ N KPN + +MDAYG N
Sbjct: 270 RSGFCPDVVSYTSLISTFGRSQQPARAREVFDMMKRNKCKPNLVSYNALMDAYGSNGYLP 329
Query: 429 SAVVWYKEMESCGFPPDQKAKNILLS 454
AV +EME G P+ + LL+
Sbjct: 330 QAVDILREMEQDGIHPNVVSICTLLA 355
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 89/411 (21%), Positives = 182/411 (44%), Gaps = 10/411 (2%)
Query: 37 QIEEVGSAVAVLRSERTRGQPLPKDLVLGTLVRLKQLKKWNVVSEVLEWLR-IQSWWDFN 95
Q + S +++ R ++V+ L+++KQ + E+ +R +S +
Sbjct: 150 QYSKALSYFELMKGTNIRPDTTTLNIVIHCLIKVKQ---YGQAIEIFSSMREKRSECRPD 206
Query: 96 EMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFR 155
+ F +I Y +G + V S M +G P++VS+ AL+ AY G K A ++F
Sbjct: 207 VVTFTSIIHLYSVRGQIEDCKAVFSTMLAEGIKPNIVSYNALISAYASHGMDKEAFSVFD 266
Query: 156 RMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYK 215
M+ SG P ++Y ++ F + + A EVF + +++ KP+ ++ ++ Y
Sbjct: 267 EMKRSGFCPDVVSYTSLISTFGRSQQPARAREVFDMM---KRNKCKPNLVSYNALMDAYG 323
Query: 216 KAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKE---VSKIYDQMQRAGLQPDVV 272
G +A + M + G+ + V+ +L++ + + + + + G+ + +
Sbjct: 324 SNGYLPQAVDILREMEQDGIHPNVVSICTLLAACGRFGQKVNIDSVLSAAELRGIHLNTI 383
Query: 273 SYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCM 332
+ I +Y E+A+ ++ M + +P + IL+ ++A FK M
Sbjct: 384 ACNSAIGSYMNIGEYEKAINLYRSMENKTTKPDSVTFTILISGCCRMSKYEEALCFFKEM 443
Query: 333 RRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNL 392
R Y++M+ AY + AE F LK G P+++TY +I Y+
Sbjct: 444 LDLRIPLSSEIYSSMICAYSKQGQLVKAESLFNSLKGSGCCPDLVTYTAMINAYSASEMW 503
Query: 393 EKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFP 443
EK+ +Y +M N I+ + + +M A+ K + ++ + M+ G P
Sbjct: 504 EKVCALYQEMEANNIQLDSIACSALMKAFNKGNQASNVLILAEIMKEKGIP 554
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 69/269 (25%), Positives = 124/269 (46%), Gaps = 5/269 (1%)
Query: 206 MFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFET---NYKEVSKIYDQM 262
+++MMI ++ + ++AR LF M + + TYN+L++ ++ + I + M
Sbjct: 32 IYNMMIRLHARHNRIDQARGLFFEMQKWRCKPDVETYNALINAHGRAGQWRWATNIMEDM 91
Query: 263 QRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMV 322
RA + P ++ LINA G EAL V ++M D GV P +NI+L A+
Sbjct: 92 LRAAIPPSRSTFNNLINACGSCGNWREALRVCKKMTDNGVGPDLVTHNIVLSAYKSGAQY 151
Query: 323 DQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFR--RLKQDGFVPNVITYG 380
+A + F+ M+ PD + ++ + A + F R K+ P+V+T+
Sbjct: 152 SKALSYFELMKGTNIRPDTTTLNIVIHCLIKVKQYGQAIEIFSSMREKRSECRPDVVTFT 211
Query: 381 TLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESC 440
++I Y+ +E ++ M GIKPN + ++ AY + A + EM+
Sbjct: 212 SIIHLYSVRGQIEDCKAVFSTMLAEGIKPNIVSYNALISAYASHGMDKEAFSVFDEMKRS 271
Query: 441 GFPPDQKAKNILLSLAKTADERNEANELL 469
GF PD + L+S + + A E+
Sbjct: 272 GFCPDVVSYTSLISTFGRSQQPARAREVF 300
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 83/378 (21%), Positives = 168/378 (44%), Gaps = 30/378 (7%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + + L+ AYG G +A +L M + G P+VVS L+ A GR G+ N +++
Sbjct: 311 NLVSYNALMDAYGSNGYLPQAVDILREMEQDGIHPNVVSICTLLAACGRFGQKVNIDSVL 370
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
+ G + + + ++ ++++A ++ ++ E KPD F ++I
Sbjct: 371 SAAELRGIHLNTIACNSAIGSYMNIGEYEKAINLYRSM---ENKTTKPDSVTFTILISGC 427
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSK---IYDQMQRAGLQPDV 271
+ YE+A F M + + S+ Y+S++ + ++ K +++ ++ +G PD+
Sbjct: 428 CRMSKYEEALCFFKEMLDLRIPLSSEIYSSMICAYSKQGQLVKAESLFNSLKGSGCCPDL 487
Query: 272 VSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMV------DQA 325
V+Y +INAY + E+ A+++EM +A NI LD+ A S ++ +QA
Sbjct: 488 VTYTAMINAYSASEMWEKVCALYQEM---------EANNIQLDSIACSALMKAFNKGNQA 538
Query: 326 RTVF---KCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTL 382
V + M+ + ++ MLSA D A ++ + ++ T L
Sbjct: 539 SNVLILAEIMKEKGIPFNDANFFEMLSACSILRDWRKATDLINLMEPSFHLVSLGTINHL 598
Query: 383 IKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMD---AYGKNKDFDSAVVWYKEMES 439
++ K E M++++ + G N ++ ++ + GK + + + W M
Sbjct: 599 LQFLGKSGKTEIMIKLFYRFVALGSSVNINTYSILLKNLLSAGKWRKYIEVLQW---MND 655
Query: 440 CGFPPDQKAKNILLSLAK 457
G P N +L A+
Sbjct: 656 AGIQPSHAMYNNILFFAQ 673
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/170 (22%), Positives = 75/170 (44%)
Query: 309 YNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLK 368
YN+++ A +DQAR +F M++ RC PD+ +Y +++A+ A A +
Sbjct: 33 YNMMIRLHARHNRIDQARGLFFEMQKWRCKPDVETYNALINAHGRAGQWRWATNIMEDML 92
Query: 369 QDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFD 428
+ P+ T+ LI N + + + KM NG+ P+ ++ AY +
Sbjct: 93 RAAIPPSRSTFNNLINACGSCGNWREALRVCKKMTDNGVGPDLVTHNIVLSAYKSGAQYS 152
Query: 429 SAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNE 478
A+ +++ M+ PD NI++ + +A E+ + +E
Sbjct: 153 KALSYFELMKGTNIRPDTTTLNIVIHCLIKVKQYGQAIEIFSSMREKRSE 202
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 58/268 (21%), Positives = 100/268 (37%), Gaps = 39/268 (14%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
+I AY KQG KAE + + + G P +V++TA++ AY ++ A+++ M+++
Sbjct: 458 MICAYSKQGQLVKAESLFNSLKGSGCCPDLVTYTAMINAYSASEMWEKVCALYQEMEANN 517
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMT--LLDEEKSPLKPDQKMFHMMIYMYKKAGG 219
+ ++ ++K F NK +A V + ++ E+ P D F M+
Sbjct: 518 IQLDSIACSALMKAF---NKGNQASNVLILAEIMKEKGIPFN-DANFFEML-SACSILRD 572
Query: 220 YEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSKIYDQMQRAGLQPDVVSYALLIN 279
+ KA L LM S T N L+ F
Sbjct: 573 WRKATDLINLMEPSFHLVSLGTINHLLQF------------------------------- 601
Query: 280 AYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSP 339
GK+ + E + +F + G Y+ILL +G + V + M P
Sbjct: 602 -LGKSGKTEIMIKLFYRFVALGSSVNINTYSILLKNLLSAGKWRKYIEVLQWMNDAGIQP 660
Query: 340 DICSYTTMLSAYVNASDMEGAEKFFRRL 367
Y +L + D E A R+
Sbjct: 661 SHAMYNNILFFAQHCGDAEYAAVIKERV 688
Score = 48.9 bits (115), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 40/166 (24%), Positives = 79/166 (47%), Gaps = 9/166 (5%)
Query: 70 LKQLKKWNVVSEVLEWLRI--QSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGY 127
+K K N S VL I + FN+ +F +++A D+ KA +++ M +
Sbjct: 529 MKAFNKGNQASNVLILAEIMKEKGIPFNDANFFEMLSACSILRDWRKATDLINLMEPSFH 588
Query: 128 APSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEE 187
S+ + L++ G+ G+ + +F R + G + TY I+LK + A K+++ E
Sbjct: 589 LVSLGTINHLLQFLGKSGKTEIMIKLFYRFVALGSSVNINTYSILLKNLLSAGKWRKYIE 648
Query: 188 VFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAER 233
V + D + ++P M++ +++ + G E A A++ ER
Sbjct: 649 VLQWMND---AGIQPSHAMYNNILFFAQHCGDAEYA----AVIKER 687
>gi|297605196|ref|NP_001056837.2| Os06g0152500 [Oryza sativa Japonica Group]
gi|255676726|dbj|BAF18751.2| Os06g0152500 [Oryza sativa Japonica Group]
Length = 717
Score = 179 bits (453), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 116/404 (28%), Positives = 204/404 (50%), Gaps = 42/404 (10%)
Query: 115 AEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILK 174
A + LS M + G AP+V ++ L+ A GR + A + M+ +G P+A+TY ++
Sbjct: 136 ARRFLSSMLRHGVAPNVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVA 195
Query: 175 LFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERG 234
F A + AE V ++L+ EE + KP+ F+ M+ KAG E ARK+F M G
Sbjct: 196 AFCRAGELDGAERV-VSLMREEGNA-KPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREG 253
Query: 235 VQQSTVTYNSLMSFETN---YKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEAL 291
+ V+YN+L+S E ++ +M + GL PDVV++ LI+A KA E+A+
Sbjct: 254 LAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAV 313
Query: 292 AVF-----------------------------------EEMLDAGVRPTHKAYNILLDAF 316
A+ EEM G++P+ YN L++ +
Sbjct: 314 ALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGY 373
Query: 317 AISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNV 376
G +D AR + + M R PD+ +Y+T++S Y +++ A + +++ + G +P+
Sbjct: 374 CKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDA 433
Query: 377 ITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKE 436
ITY +LI+G + L E+++ M G++P++ +TT++D + K + + A+ + E
Sbjct: 434 ITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDE 493
Query: 437 MESCGFPPDQKAKNILLS-LAKTADERNEANELLGNFNHPNNEP 479
M G PD ++L++ L+K+A + EA+ LL H + P
Sbjct: 494 MIRKGVLPDVVTYSVLINGLSKSARTK-EAHRLLFKLYHEDPVP 536
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 84/365 (23%), Positives = 176/365 (48%), Gaps = 21/365 (5%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
L++ Y K G +++ V S M ++G P VV+ T+L+ A + G + A A+ +M+ G
Sbjct: 264 LLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERG 323
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
R + +T+ ++ F + +A + + + K ++P ++ +I Y K G +
Sbjct: 324 LRMNEVTFTALIDGFCKKGFLDDA---LLAVEEMRKCGIQPSVVCYNALINGYCKLGRMD 380
Query: 222 KARKLFALMAERGVQQSTVTYNSLMSFET---NYKEVSKIYDQMQRAGLQPDVVSYALLI 278
AR+L M + V+ VTY++++S N ++ +M + G+ PD ++Y+ LI
Sbjct: 381 LARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLI 440
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCS 338
+ +R +A +FE ML GV+P Y L+D G V++A ++ M R
Sbjct: 441 RGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVL 500
Query: 339 PDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTL---------------I 383
PD+ +Y+ +++ ++ + A + +L + VP+ I Y L +
Sbjct: 501 PDVVTYSVLINGLSKSARTKEAHRLLFKLYHEDPVPDNIKYDALMLCCSKAEFKSVVALL 560
Query: 384 KGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFP 443
KG+ +++ ++Y M K + ++++ ++ + + + A+ ++K+M GF
Sbjct: 561 KGFCMKGLMKEADKVYQSMLDRNWKLDGSVYSILIHGHCRGGNVRKALSFHKQMLRSGFS 620
Query: 444 PDQKA 448
P+ +
Sbjct: 621 PNSTS 625
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 91/380 (23%), Positives = 168/380 (44%), Gaps = 43/380 (11%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYA-PSVVSHTALMEAYGRGGRYKNAEAI 153
N + + L+ A+ + G+ + AE+V+S M ++G A P++V+ +++ + GR + A +
Sbjct: 186 NAVTYNTLVAAFCRAGELDGAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKV 245
Query: 154 FRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYM 213
F M G P ++Y +L + + E+ VF + + L PD F +I+
Sbjct: 246 FDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEM---TQRGLVPDVVTFTSLIHA 302
Query: 214 YKKAGGYEKARKLFALMAERG-----------------------------------VQQS 238
KAG E+A L A M ERG +Q S
Sbjct: 303 TCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPS 362
Query: 239 TVTYNSLMSFETNYKEV---SKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFE 295
V YN+L++ + ++ +M+ ++PDVV+Y+ +I+ Y K + A + +
Sbjct: 363 VVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQ 422
Query: 296 EMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNAS 355
+ML GV P Y+ L+ ++ A +F+ M + PD +YTT++ +
Sbjct: 423 KMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEG 482
Query: 356 DMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFT 415
++E A + + G +P+V+TY LI G +K ++ + K+ P+ +
Sbjct: 483 NVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKEAHRLLFKLYHEDPVPDNIKYD 542
Query: 416 TIMDAYGKNKDFDSAVVWYK 435
+M K +F S V K
Sbjct: 543 ALMLCCSK-AEFKSVVALLK 561
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 79/310 (25%), Positives = 144/310 (46%), Gaps = 21/310 (6%)
Query: 94 FNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAI 153
NE+ F LI + K+G + A + M K G PSVV + AL+ Y + GR A +
Sbjct: 326 MNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLAREL 385
Query: 154 FRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYM 213
R M++ +P +TY I+ + + A ++ +L K + PD + +I
Sbjct: 386 IREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKML---KKGVLPDAITYSSLIRG 442
Query: 214 YKKAGGYEKARKLFALMAERGVQQSTVTYNSLM---SFETNYKEVSKIYDQMQRAGLQPD 270
+ A +LF M + GVQ TY +L+ E N ++ ++D+M R G+ PD
Sbjct: 443 LCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPD 502
Query: 271 VVSYALLINAYGKARREEEALAV---------------FEEMLDAGVRPTHKAYNILLDA 315
VV+Y++LIN K+ R +EA + ++ ++ + K+ LL
Sbjct: 503 VVTYSVLINGLSKSARTKEAHRLLFKLYHEDPVPDNIKYDALMLCCSKAEFKSVVALLKG 562
Query: 316 FAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPN 375
F + G++ +A V++ M D Y+ ++ + ++ A F +++ + GF PN
Sbjct: 563 FCMKGLMKEADKVYQSMLDRNWKLDGSVYSILIHGHCRGGNVRKALSFHKQMLRSGFSPN 622
Query: 376 VITYGTLIKG 385
+ +L++G
Sbjct: 623 STSTISLVRG 632
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 62/277 (22%), Positives = 110/277 (39%), Gaps = 56/277 (20%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
LI Y K G + A +++ M K P VV+++ ++ Y + G +A + ++M G
Sbjct: 369 LINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKG 428
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
P A+TY +++ E + +A E+F +L + ++PD+ + +I + K G E
Sbjct: 429 VLPDAITYSSLIRGLCEEKRLNDACELFENML---QLGVQPDEFTYTTLIDGHCKEGNVE 485
Query: 222 KARKLFALMAERGVQQSTVT-----------------------------------YNSLM 246
KA L M +GV VT Y++LM
Sbjct: 486 KALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKEAHRLLFKLYHEDPVPDNIKYDALM 545
Query: 247 ------------------SFETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREE 288
+ KE K+Y M + D Y++LI+ + +
Sbjct: 546 LCCSKAEFKSVVALLKGFCMKGLMKEADKVYQSMLDRNWKLDGSVYSILIHGHCRGGNVR 605
Query: 289 EALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQA 325
+AL+ ++ML +G P + L+ GMV +A
Sbjct: 606 KALSFHKQMLRSGFSPNSTSTISLVRGLFEEGMVVEA 642
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 54/237 (22%), Positives = 96/237 (40%), Gaps = 52/237 (21%)
Query: 58 LPKDLVLGTLVR-LKQLKKWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAE 116
LP + +L+R L + K+ N E+ E + +Q +E + LI + K+G+ KA
Sbjct: 430 LPDAITYSSLIRGLCEEKRLNDACELFENM-LQLGVQPDEFTYTTLIDGHCKEGNVEKAL 488
Query: 117 KVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQII---- 172
+ M +KG P VV+++ L+ + R K A + ++ P P + Y +
Sbjct: 489 SLHDEMIRKGVLPDVVTYSVLINGLSKSARTKEAHRLLFKLYHEDPVPDNIKYDALMLCC 548
Query: 173 -----------LKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
LK F KEA++V+ ++LD K D ++ ++I+ + + G
Sbjct: 549 SKAEFKSVVALLKGFCMKGLMKEADKVYQSMLDRN---WKLDGSVYSILIHGHCRGGNVR 605
Query: 222 KARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSKIYDQMQRAGLQPDVVSYALLI 278
KA +SF + QM R+G P+ S L+
Sbjct: 606 KA----------------------LSF----------HKQMLRSGFSPNSTSTISLV 630
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 46/93 (49%), Gaps = 1/93 (1%)
Query: 338 SPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMME 397
+P + +Y +L A +AS + A +F + + G PNV TY L++ LE+ +
Sbjct: 115 APSVPAYNAVLLALSDAS-LPSARRFLSSMLRHGVAPNVYTYNILVRALCARGRLEEAVG 173
Query: 398 IYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSA 430
+ MR G PN + T++ A+ + + D A
Sbjct: 174 VVGDMRGAGCAPNAVTYNTLVAAFCRAGELDGA 206
>gi|224092696|ref|XP_002309701.1| predicted protein [Populus trichocarpa]
gi|222855677|gb|EEE93224.1| predicted protein [Populus trichocarpa]
Length = 597
Score = 179 bits (453), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 102/356 (28%), Positives = 191/356 (53%), Gaps = 8/356 (2%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
+I K G+ A +L M + G P++V+++ L+++ R A IF M++ G
Sbjct: 204 IINGLCKIGETAAAAGLLKKMEEAGCQPNMVTYSTLIDSLCRDRLVNEALDIFSYMKAKG 263
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSP-LKPDQKMFHMMIYMYKKAGGY 220
P TY +++ + +++KEA LL+E S + PD F++++ + K G
Sbjct: 264 ISPDIFTYTSLIQGLCKFSRWKEAS----ALLNEMTSLNIMPDIVTFNVLVDTFCKEGKV 319
Query: 221 EKARKLFALMAERGVQQSTVTYNSLM---SFETNYKEVSKIYDQMQRAGLQPDVVSYALL 277
+A + M E GV+ + VTY+SLM S T+ E K++ M G +P++ SY +L
Sbjct: 320 SEALGVLKTMTEMGVEPNVVTYSSLMYGYSLWTDVVEARKLFHVMITKGCKPNIFSYNIL 379
Query: 278 INAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRC 337
IN Y KA+R +EA+ +F EM+ G+ P + +YN L+ F G + +A+ +F+ M +
Sbjct: 380 INGYCKAKRIDEAMQLFNEMIHQGLTPNNVSYNTLIHGFCQLGKLREAQDLFRNMCTNGN 439
Query: 338 SPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMME 397
PD+ +Y+ +L + + A + FR ++ PN++ Y L+ K N + +
Sbjct: 440 LPDLFTYSILLDGFCKQGYLGKAFRLFRAMQSTYLKPNLVMYTILVHAMCKSGNHKDARK 499
Query: 398 IYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILL 453
++ ++ V G++P+ ++TTI++ K D A+ ++ ME+ G PPD+ + N+++
Sbjct: 500 LFSELFVQGLQPHVQLYTTIINGLCKEGLLDEALEAFRNMEADGCPPDEISYNVII 555
Score = 144 bits (364), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 92/378 (24%), Positives = 171/378 (45%), Gaps = 13/378 (3%)
Query: 118 VLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFV 177
VL+ + K G P++V+ T L+ + G + A +F M + G +P TY I+
Sbjct: 150 VLAKVIKLGLQPTIVTFTTLINGLCKVGEFAQAVELFDDMVAKGCQPDVYTYNTIINGLC 209
Query: 178 EANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQ 237
K E L E++ +P+ + +I + +A +F+ M +G+
Sbjct: 210 ---KIGETAAAAGLLKKMEEAGCQPNMVTYSTLIDSLCRDRLVNEALDIFSYMKAKGISP 266
Query: 238 STVTYNSLMSFETNY---KEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVF 294
TY SL+ + KE S + ++M + PD+V++ +L++ + K + EAL V
Sbjct: 267 DIFTYTSLIQGLCKFSRWKEASALLNEMTSLNIMPDIVTFNVLVDTFCKEGKVSEALGVL 326
Query: 295 EEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNA 354
+ M + GV P Y+ L+ +++ V +AR +F M C P+I SY +++ Y A
Sbjct: 327 KTMTEMGVEPNVVTYSSLMYGYSLWTDVVEARKLFHVMITKGCKPNIFSYNILINGYCKA 386
Query: 355 SDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIF 414
++ A + F + G PN ++Y TLI G+ ++ L + +++ M NG P+ +
Sbjct: 387 KRIDEAMQLFNEMIHQGLTPNNVSYNTLIHGFCQLGKLREAQDLFRNMCTNGNLPDLFTY 446
Query: 415 TTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNH 474
+ ++D + K A ++ M+S P+ IL+ + +A +L
Sbjct: 447 SILLDGFCKQGYLGKAFRLFRAMQSTYLKPNLVMYTILVHAMCKSGNHKDARKLFSELFV 506
Query: 475 PNNEPG-------INGLS 485
+P INGL
Sbjct: 507 QGLQPHVQLYTTIINGLC 524
Score = 129 bits (323), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 89/365 (24%), Positives = 163/365 (44%), Gaps = 7/365 (1%)
Query: 129 PSVVSHTALMEAYGRGGRYKNAE-AIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEE 187
P ++ L+ A + G+Y + ++ ++M+ G P+ T I + F + + +
Sbjct: 90 PCIIQFAKLLSAIVKMGQYYDVVISLSKQMELVGLSPNIYTLSIFMNCFCQ---LQRVDL 146
Query: 188 VFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMS 247
F L K L+P F +I K G + +A +LF M +G Q TYN++++
Sbjct: 147 GFSVLAKVIKLGLQPTIVTFTTLINGLCKVGEFAQAVELFDDMVAKGCQPDVYTYNTIIN 206
Query: 248 FETNYKEVSK---IYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRP 304
E + + +M+ AG QP++V+Y+ LI++ + R EAL +F M G+ P
Sbjct: 207 GLCKIGETAAAAGLLKKMEEAGCQPNMVTYSTLIDSLCRDRLVNEALDIFSYMKAKGISP 266
Query: 305 THKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFF 364
Y L+ +A + M PDI ++ ++ + + A
Sbjct: 267 DIFTYTSLIQGLCKFSRWKEASALLNEMTSLNIMPDIVTFNVLVDTFCKEGKVSEALGVL 326
Query: 365 RRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKN 424
+ + + G PNV+TY +L+ GY+ ++ + +++ M G KPN + +++ Y K
Sbjct: 327 KTMTEMGVEPNVVTYSSLMYGYSLWTDVVEARKLFHVMITKGCKPNIFSYNILINGYCKA 386
Query: 425 KDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGINGL 484
K D A+ + EM G P+ + N L+ + EA +L N N P +
Sbjct: 387 KRIDEAMQLFNEMIHQGLTPNNVSYNTLIHGFCQLGKLREAQDLFRNMCTNGNLPDLFTY 446
Query: 485 SISVD 489
SI +D
Sbjct: 447 SILLD 451
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 75/311 (24%), Positives = 151/311 (48%), Gaps = 9/311 (2%)
Query: 70 LKQLKKWNVVSEVL-EWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYA 128
L + +W S +L E + D + F +L+ + K+G ++A VL M + G
Sbjct: 278 LCKFSRWKEASALLNEMTSLNIMPDI--VTFNVLVDTFCKEGKVSEALGVLKTMTEMGVE 335
Query: 129 PSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEV 188
P+VV++++LM Y A +F M + G +P+ +Y I++ + +A + EA ++
Sbjct: 336 PNVVTYSSLMYGYSLWTDVVEARKLFHVMITKGCKPNIFSYNILINGYCKAKRIDEAMQL 395
Query: 189 FMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLM-- 246
F ++ + L P+ ++ +I+ + + G +A+ LF M G TY+ L+
Sbjct: 396 FNEMIHQG---LTPNNVSYNTLIHGFCQLGKLREAQDLFRNMCTNGNLPDLFTYSILLDG 452
Query: 247 -SFETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPT 305
+ + +++ MQ L+P++V Y +L++A K+ ++A +F E+ G++P
Sbjct: 453 FCKQGYLGKAFRLFRAMQSTYLKPNLVMYTILVHAMCKSGNHKDARKLFSELFVQGLQPH 512
Query: 306 HKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFR 365
+ Y +++ G++D+A F+ M D C PD SY ++ + D A
Sbjct: 513 VQLYTTIINGLCKEGLLDEALEAFRNMEADGCPPDEISYNVIIRGLLQHKDESRALLLVG 572
Query: 366 RLKQDGFVPNV 376
++ GF+ +V
Sbjct: 573 EMRDRGFIADV 583
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 77/337 (22%), Positives = 153/337 (45%), Gaps = 11/337 (3%)
Query: 149 NAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDE-EKSPLKPDQKMF 207
+A A F M P P + + +L V+ ++ + V ++L + E L P+
Sbjct: 75 DALASFNHMLHRKPLPCIIQFAKLLSAIVKMGQYYD---VVISLSKQMELVGLSPNIYTL 131
Query: 208 HMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSK---IYDQMQR 264
+ + + + + + A + + G+Q + VT+ +L++ E ++ ++D M
Sbjct: 132 SIFMNCFCQLQRVDLGFSVLAKVIKLGLQPTIVTFTTLINGLCKVGEFAQAVELFDDMVA 191
Query: 265 AGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQ 324
G QPDV +Y +IN K A + ++M +AG +P Y+ L+D+ +V++
Sbjct: 192 KGCQPDVYTYNTIINGLCKIGETAAAAGLLKKMEEAGCQPNMVTYSTLIDSLCRDRLVNE 251
Query: 325 ARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIK 384
A +F M+ SPDI +YT+++ S + A + +P+++T+ L+
Sbjct: 252 ALDIFSYMKAKGISPDIFTYTSLIQGLCKFSRWKEASALLNEMTSLNIMPDIVTFNVLVD 311
Query: 385 GYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPP 444
+ K + + + + M G++PN ++++M Y D A + M + G P
Sbjct: 312 TFCKEGKVSEALGVLKTMTEMGVEPNVVTYSSLMYGYSLWTDVVEARKLFHVMITKGCKP 371
Query: 445 DQKAKNILLSLAKTADERNEANELLGNFNH----PNN 477
+ + NIL++ A +EA +L H PNN
Sbjct: 372 NIFSYNILINGYCKAKRIDEAMQLFNEMIHQGLTPNN 408
>gi|224083253|ref|XP_002306972.1| predicted protein [Populus trichocarpa]
gi|222856421|gb|EEE93968.1| predicted protein [Populus trichocarpa]
Length = 709
Score = 179 bits (453), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 114/409 (27%), Positives = 203/409 (49%), Gaps = 9/409 (2%)
Query: 52 RTRGQPLPKDLVLGTLVRLKQLKKWNVVSEVLEWLRIQSWWDFNEMDFLM---LITAYGK 108
R R P D V +L+ ++K V S +L+ L + D E+D + +I + K
Sbjct: 223 RMRQDGYPSDFVNYSLIIRSLMRKNRVDSAILQKLYREIECDKLELDVQLSNDIIVGFAK 282
Query: 109 QGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALT 168
GD +KA + L + G + + A++ A G GR AEAIF M+ +G +P
Sbjct: 283 AGDLSKALEFLGVVQGSGLSVKTATLVAVIWALGNCGRTVEAEAIFEEMRDNGLKPRTRA 342
Query: 169 YQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFA 228
Y +L+ +V+A K+AE V + E+S + P+++ + +I Y AG +E AR +
Sbjct: 343 YNALLRGYVKAGLLKDAEFVVSEM---ERSGVSPNEQTYSFLIDAYGNAGRWESARIVLK 399
Query: 229 LMAERGVQQSTVTYNSLMSFETNYKEVSK---IYDQMQRAGLQPDVVSYALLINAYGKAR 285
M VQ + ++ ++S + E K + +M+ +G++PD V Y ++I+ +GK
Sbjct: 400 EMEASNVQPNAYVFSRILSSYRDKGEWQKSFQVLREMENSGVRPDRVFYNVMIDTFGKFN 459
Query: 286 REEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYT 345
+ A+A F+ ML G+ P +N L+D +G D+A +F+ M SP ++
Sbjct: 460 CLDHAMATFDRMLSEGIEPDTVTWNTLIDCHCRAGKHDRAEELFEEMMEGGYSPCNTTFN 519
Query: 346 TMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVN 405
M++++ + + + ++ G VPN +TY TLI Y K +E D M+
Sbjct: 520 IMINSFGDQERWDDVKNLLAHMRSQGLVPNSVTYTTLIDIYGKSGRFNDAIECLDDMKAA 579
Query: 406 GIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLS 454
G+KP+ T++ +++AY + + AV ++ M G P A N L++
Sbjct: 580 GLKPSSTMYNALINAYAQRGLSEQAVSAFRAMRVDGLKPSLLALNSLIN 628
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 93/359 (25%), Positives = 178/359 (49%), Gaps = 6/359 (1%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
L+ Y K G AE V+S M + G +P+ +++ L++AYG GR+++A + + M++S
Sbjct: 346 LLRGYVKAGLLKDAEFVVSEMERSGVSPNEQTYSFLIDAYGNAGRWESARIVLKEMEASN 405
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
+P+A + IL + + +++++ F L + E S ++PD+ +++MI + K +
Sbjct: 406 VQPNAYVFSRILSSYRDKGEWQKS---FQVLREMENSGVRPDRVFYNVMIDTFGKFNCLD 462
Query: 222 KARKLFALMAERGVQQSTVTYNSLMSFET---NYKEVSKIYDQMQRAGLQPDVVSYALLI 278
A F M G++ TVT+N+L+ + +++++M G P ++ ++I
Sbjct: 463 HAMATFDRMLSEGIEPDTVTWNTLIDCHCRAGKHDRAEELFEEMMEGGYSPCNTTFNIMI 522
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCS 338
N++G R ++ + M G+ P Y L+D + SG + A M+
Sbjct: 523 NSFGDQERWDDVKNLLAHMRSQGLVPNSVTYTTLIDIYGKSGRFNDAIECLDDMKAAGLK 582
Query: 339 PDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEI 398
P Y +++AY E A FR ++ DG P+++ +LI + + + +
Sbjct: 583 PSSTMYNALINAYAQRGLSEQAVSAFRAMRVDGLKPSLLALNSLINAFGEDRRDAEAFTV 642
Query: 399 YDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAK 457
M+ N +KP+ +TT+M A + + FD Y+EM G PD+KA+ +L S K
Sbjct: 643 LQYMKENDLKPDVVTYTTLMKALIRVEKFDKVPSVYEEMILSGCTPDRKARAMLRSALK 701
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 93/377 (24%), Positives = 179/377 (47%), Gaps = 11/377 (2%)
Query: 82 VLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAY 141
V+ WL+ + E+ + +LI A G+ +A F+ + + +++ AL+ A
Sbjct: 154 VVLWLQKHNLCFSYELLYSILIHALGQSEKLYEA-----FLLSQRQNLTPLTYNALISAC 208
Query: 142 GRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDE-EKSPL 200
R + A + RM+ G + Y +I++ + N+ A + L E E L
Sbjct: 209 ARNNDLEKALNLITRMRQDGYPSDFVNYSLIIRSLMRKNRVDSA--ILQKLYREIECDKL 266
Query: 201 KPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYK---EVSK 257
+ D ++ + +I + KAG KA + ++ G+ T T +++ N E
Sbjct: 267 ELDVQLSNDIIVGFAKAGDLSKALEFLGVVQGSGLSVKTATLVAVIWALGNCGRTVEAEA 326
Query: 258 IYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFA 317
I+++M+ GL+P +Y L+ Y KA ++A V EM +GV P + Y+ L+DA+
Sbjct: 327 IFEEMRDNGLKPRTRAYNALLRGYVKAGLLKDAEFVVSEMERSGVSPNEQTYSFLIDAYG 386
Query: 318 ISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVI 377
+G + AR V K M P+ ++ +LS+Y + + + + + R ++ G P+ +
Sbjct: 387 NAGRWESARIVLKEMEASNVQPNAYVFSRILSSYRDKGEWQKSFQVLREMENSGVRPDRV 446
Query: 378 TYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEM 437
Y +I + K N L+ M +D+M GI+P+ + T++D + + D A ++EM
Sbjct: 447 FYNVMIDTFGKFNCLDHAMATFDRMLSEGIEPDTVTWNTLIDCHCRAGKHDRAEELFEEM 506
Query: 438 ESCGFPPDQKAKNILLS 454
G+ P NI+++
Sbjct: 507 MEGGYSPCNTTFNIMIN 523
Score = 128 bits (321), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 90/402 (22%), Positives = 170/402 (42%), Gaps = 43/402 (10%)
Query: 93 DFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNA-- 150
+ + + LI+A + D KA +++ M + GY V+++ ++ + R R +A
Sbjct: 195 NLTPLTYNALISACARNNDLEKALNLITRMRQDGYPSDFVNYSLIIRSLMRKNRVDSAIL 254
Query: 151 EAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMM 210
+ ++R ++ I+ F +A +A E + + S L +
Sbjct: 255 QKLYREIECDKLELDVQLSNDIIVGFAKAGDLSKALEFLGVV---QGSGLSVKTATLVAV 311
Query: 211 IYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETN---YKEVSKIYDQMQRAGL 267
I+ G +A +F M + G++ T YN+L+ K+ + +M+R+G+
Sbjct: 312 IWALGNCGRTVEAEAIFEEMRDNGLKPRTRAYNALLRGYVKAGLLKDAEFVVSEMERSGV 371
Query: 268 QPDVVSYALLINAYGKARREEEA-----------------------------------LA 292
P+ +Y+ LI+AYG A R E A
Sbjct: 372 SPNEQTYSFLIDAYGNAGRWESARIVLKEMEASNVQPNAYVFSRILSSYRDKGEWQKSFQ 431
Query: 293 VFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYV 352
V EM ++GVRP YN+++D F +D A F M + PD ++ T++ +
Sbjct: 432 VLREMENSGVRPDRVFYNVMIDTFGKFNCLDHAMATFDRMLSEGIEPDTVTWNTLIDCHC 491
Query: 353 NASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQT 412
A + AE+ F + + G+ P T+ +I + + + + MR G+ PN
Sbjct: 492 RAGKHDRAEELFEEMMEGGYSPCNTTFNIMINSFGDQERWDDVKNLLAHMRSQGLVPNSV 551
Query: 413 IFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLS 454
+TT++D YGK+ F+ A+ +M++ G P N L++
Sbjct: 552 TYTTLIDIYGKSGRFNDAIECLDDMKAAGLKPSSTMYNALIN 593
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/267 (22%), Positives = 123/267 (46%), Gaps = 7/267 (2%)
Query: 218 GGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSK---IYDQMQRAGLQPDVVSY 274
G EK + F L + + + +TYN+L+S ++ K + +M++ G D V+Y
Sbjct: 179 GQSEKLYEAFLLSQRQNL--TPLTYNALISACARNNDLEKALNLITRMRQDGYPSDFVNY 236
Query: 275 ALLINAYGKARREEEALA--VFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCM 332
+L+I + + R + A+ ++ E+ + + N ++ FA +G + +A +
Sbjct: 237 SLIIRSLMRKNRVDSAILQKLYREIECDKLELDVQLSNDIIVGFAKAGDLSKALEFLGVV 296
Query: 333 RRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNL 392
+ S + ++ A N AE F ++ +G P Y L++GY K L
Sbjct: 297 QGSGLSVKTATLVAVIWALGNCGRTVEAEAIFEEMRDNGLKPRTRAYNALLRGYVKAGLL 356
Query: 393 EKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNIL 452
+ + +M +G+ PN+ ++ ++DAYG ++SA + KEME+ P+ + +
Sbjct: 357 KDAEFVVSEMERSGVSPNEQTYSFLIDAYGNAGRWESARIVLKEMEASNVQPNAYVFSRI 416
Query: 453 LSLAKTADERNEANELLGNFNHPNNEP 479
LS + E ++ ++L + P
Sbjct: 417 LSSYRDKGEWQKSFQVLREMENSGVRP 443
>gi|449523013|ref|XP_004168519.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g41720-like, partial [Cucumis sativus]
Length = 594
Score = 179 bits (453), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 95/339 (28%), Positives = 174/339 (51%), Gaps = 4/339 (1%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
LI A G G++ +A +V M G P +V+H ++ AY G +Y A + F M+ +
Sbjct: 11 LINACGSCGNWREALRVCKKMTDNGVGPDLVTHNIVLSAYKSGAQYSKALSYFELMKGTN 70
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
RP T I++ ++ ++ +A E+F + + E++S +PD F +I++Y G E
Sbjct: 71 IRPDTTTLNIVIHCLIKVKQYGQAIEIFSS-MREKRSECRPDVVTFTSIIHLYSVRGQIE 129
Query: 222 KARKLFALMAERGVQQSTVTYNSLMSFETNY---KEVSKIYDQMQRAGLQPDVVSYALLI 278
+ +F+ M G++ + V+YN+L+S ++ KE ++D+M+R+G PDVVSY LI
Sbjct: 130 DCKAVFSTMLAEGIKPNIVSYNALISAYASHGMDKEAFSVFDEMKRSGFCPDVVSYTSLI 189
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCS 338
+ +G++++ A VF+ M +P +YN L+DA+ +G + QA + + M +D
Sbjct: 190 STFGRSQQPARAREVFDMMKRNKCKPNLVSYNALMDAYGSNGYLPQAVDILREMEQDGIH 249
Query: 339 PDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEI 398
P++ S T+L+A + + G N I + I Y + EK + +
Sbjct: 250 PNVVSICTLLAACGRFGQKVNIDSVLSAAELRGIHLNTIACNSAIGSYMNIGEYEKAINL 309
Query: 399 YDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEM 437
Y M KP+ FT ++ + ++ A+ ++KEM
Sbjct: 310 YRSMENKTTKPDSVTFTILISGCCRMSKYEEALCFFKEM 348
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 90/407 (22%), Positives = 192/407 (47%), Gaps = 9/407 (2%)
Query: 37 QIEEVGSAVAVLRSER-TRGQPLPKDLVLGTLVRLKQLKKWNVVSEVLEWLRIQSWWDFN 95
++++ G A+ + S R R + P + +++ L ++ + + + N
Sbjct: 87 KVKQYGQAIEIFSSMREKRSECRPDVVTFTSIIHLYSVRGQIEDCKAVFSTMLAEGIKPN 146
Query: 96 EMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFR 155
+ + LI+AY G +A V M + G+ P VVS+T+L+ +GR + A +F
Sbjct: 147 IVSYNALISAYASHGMDKEAFSVFDEMKRSGFCPDVVSYTSLISTFGRSQQPARAREVFD 206
Query: 156 RMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYK 215
M+ + +P+ ++Y ++ + +A ++ L + E+ + P+ ++
Sbjct: 207 MMKRNKCKPNLVSYNALMDAYGSNGYLPQAVDI---LREMEQDGIHPNVVSICTLLAACG 263
Query: 216 KAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETN---YKEVSKIYDQMQRAGLQPDVV 272
+ G + + RG+ +T+ NS + N Y++ +Y M+ +PD V
Sbjct: 264 RFGQKVNIDSVLSAAELRGIHLNTIACNSAIGSYMNIGEYEKAINLYRSMENKTTKPDSV 323
Query: 273 SYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCM 332
++ +LI+ + + EEAL F+EMLD + + + Y+ ++ A++ G + +A ++F +
Sbjct: 324 TFTILISGCCRMSKYEEALCFFKEMLDLRIPLSSEIYSSMICAYSKQGQLVKAESLFNSL 383
Query: 333 RRDRCSPDICSYTTMLSAYVNASDM-EGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNN 391
+ C PD+ +YT M++AY +AS+M E ++ ++ + + I L+K + K N
Sbjct: 384 KGSGCCPDLVTYTAMINAY-SASEMWEKVCALYQEMEANNIQLDSIACSALMKAFNKGNQ 442
Query: 392 LEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEME 438
++ + + M+ GI N F ++ A +D+ A ME
Sbjct: 443 ASNVLILAEIMKEKGIPFNDANFFEMLSACSILRDWRKATDLINLME 489
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 87/401 (21%), Positives = 179/401 (44%), Gaps = 10/401 (2%)
Query: 47 VLRSERTRGQPLPKDLVLGTLVRLKQLKKWNVVSEVLEWLR-IQSWWDFNEMDFLMLITA 105
+++ R ++V+ L+++KQ + E+ +R +S + + F +I
Sbjct: 65 LMKGTNIRPDTTTLNIVIHCLIKVKQ---YGQAIEIFSSMREKRSECRPDVVTFTSIIHL 121
Query: 106 YGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPS 165
Y +G + V S M +G P++VS+ AL+ AY G K A ++F M+ SG P
Sbjct: 122 YSVRGQIEDCKAVFSTMLAEGIKPNIVSYNALISAYASHGMDKEAFSVFDEMKRSGFCPD 181
Query: 166 ALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARK 225
++Y ++ F + + A EVF + +++ KP+ ++ ++ Y G +A
Sbjct: 182 VVSYTSLISTFGRSQQPARAREVFDMM---KRNKCKPNLVSYNALMDAYGSNGYLPQAVD 238
Query: 226 LFALMAERGVQQSTVTYNSLMSFETNYKE---VSKIYDQMQRAGLQPDVVSYALLINAYG 282
+ M + G+ + V+ +L++ + + + + + G+ + ++ I +Y
Sbjct: 239 ILREMEQDGIHPNVVSICTLLAACGRFGQKVNIDSVLSAAELRGIHLNTIACNSAIGSYM 298
Query: 283 KARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDIC 342
E+A+ ++ M + +P + IL+ ++A FK M R
Sbjct: 299 NIGEYEKAINLYRSMENKTTKPDSVTFTILISGCCRMSKYEEALCFFKEMLDLRIPLSSE 358
Query: 343 SYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKM 402
Y++M+ AY + AE F LK G P+++TY +I Y+ EK+ +Y +M
Sbjct: 359 IYSSMICAYSKQGQLVKAESLFNSLKGSGCCPDLVTYTAMINAYSASEMWEKVCALYQEM 418
Query: 403 RVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFP 443
N I+ + + +M A+ K + ++ + M+ G P
Sbjct: 419 EANNIQLDSIACSALMKAFNKGNQASNVLILAEIMKEKGIP 459
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/260 (25%), Positives = 114/260 (43%), Gaps = 40/260 (15%)
Query: 235 VQQSTVTYNSLMSFET---NYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEAL 291
+ S T+N+L++ N++E ++ +M G+ PD+V++ ++++AY + +AL
Sbjct: 1 IPPSRSTFNNLINACGSCGNWREALRVCKKMTDNGVGPDLVTHNIVLSAYKSGAQYSKAL 60
Query: 292 AVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMR--RDRCSPDICSYTTMLS 349
+ FE M +RP NI++ QA +F MR R C PD+ ++T+++
Sbjct: 61 SYFELMKGTNIRPDTTTLNIVIHCLIKVKQYGQAIEIFSSMREKRSECRPDVVTFTSIIH 120
Query: 350 AYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYA---------------------- 387
Y +E + F + +G PN+++Y LI YA
Sbjct: 121 LYSVRGQIEDCKAVFSTMLAEGIKPNIVSYNALISAYASHGMDKEAFSVFDEMKRSGFCP 180
Query: 388 -------------KVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWY 434
+ + E++D M+ N KPN + +MDAYG N AV
Sbjct: 181 DVVSYTSLISTFGRSQQPARAREVFDMMKRNKCKPNLVSYNALMDAYGSNGYLPQAVDIL 240
Query: 435 KEMESCGFPPDQKAKNILLS 454
+EME G P+ + LL+
Sbjct: 241 REMEQDGIHPNVVSICTLLA 260
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 83/378 (21%), Positives = 168/378 (44%), Gaps = 30/378 (7%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + + L+ AYG G +A +L M + G P+VVS L+ A GR G+ N +++
Sbjct: 216 NLVSYNALMDAYGSNGYLPQAVDILREMEQDGIHPNVVSICTLLAACGRFGQKVNIDSVL 275
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
+ G + + + ++ ++++A ++ ++ E KPD F ++I
Sbjct: 276 SAAELRGIHLNTIACNSAIGSYMNIGEYEKAINLYRSM---ENKTTKPDSVTFTILISGC 332
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSK---IYDQMQRAGLQPDV 271
+ YE+A F M + + S+ Y+S++ + ++ K +++ ++ +G PD+
Sbjct: 333 CRMSKYEEALCFFKEMLDLRIPLSSEIYSSMICAYSKQGQLVKAESLFNSLKGSGCCPDL 392
Query: 272 VSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMV------DQA 325
V+Y +INAY + E+ A+++EM +A NI LD+ A S ++ +QA
Sbjct: 393 VTYTAMINAYSASEMWEKVCALYQEM---------EANNIQLDSIACSALMKAFNKGNQA 443
Query: 326 RTVF---KCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTL 382
V + M+ + ++ MLSA D A ++ + ++ T L
Sbjct: 444 SNVLILAEIMKEKGIPFNDANFFEMLSACSILRDWRKATDLINLMEPSFHLVSLGTINHL 503
Query: 383 IKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMD---AYGKNKDFDSAVVWYKEMES 439
++ K E M++++ + G N ++ ++ + GK + + + W M
Sbjct: 504 LQFLGKSGKTEIMIKLFYRFVALGSSVNINTYSILLKNLLSAGKWRKYIEVLQW---MND 560
Query: 440 CGFPPDQKAKNILLSLAK 457
G P N +L A+
Sbjct: 561 AGIQPSHAMYNNILFFAQ 578
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 91/205 (44%), Gaps = 2/205 (0%)
Query: 267 LQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQAR 326
+ P ++ LINA G EAL V ++M D GV P +NI+L A+ +A
Sbjct: 1 IPPSRSTFNNLINACGSCGNWREALRVCKKMTDNGVGPDLVTHNIVLSAYKSGAQYSKAL 60
Query: 327 TVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFR--RLKQDGFVPNVITYGTLIK 384
+ F+ M+ PD + ++ + A + F R K+ P+V+T+ ++I
Sbjct: 61 SYFELMKGTNIRPDTTTLNIVIHCLIKVKQYGQAIEIFSSMREKRSECRPDVVTFTSIIH 120
Query: 385 GYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPP 444
Y+ +E ++ M GIKPN + ++ AY + A + EM+ GF P
Sbjct: 121 LYSVRGQIEDCKAVFSTMLAEGIKPNIVSYNALISAYASHGMDKEAFSVFDEMKRSGFCP 180
Query: 445 DQKAKNILLSLAKTADERNEANELL 469
D + L+S + + A E+
Sbjct: 181 DVVSYTSLISTFGRSQQPARAREVF 205
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 40/168 (23%), Positives = 80/168 (47%), Gaps = 9/168 (5%)
Query: 70 LKQLKKWNVVSEVLEWLRI--QSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGY 127
+K K N S VL I + FN+ +F +++A D+ KA +++ M +
Sbjct: 434 MKAFNKGNQASNVLILAEIMKEKGIPFNDANFFEMLSACSILRDWRKATDLINLMEPSFH 493
Query: 128 APSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEE 187
S+ + L++ G+ G+ + +F R + G + TY I+LK + A K+++ E
Sbjct: 494 LVSLGTINHLLQFLGKSGKTEIMIKLFYRFVALGSSVNINTYSILLKNLLSAGKWRKYIE 553
Query: 188 VFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGV 235
V + D + ++P M++ +++ + G E A A++ ER +
Sbjct: 554 VLQWMND---AGIQPSHAMYNNILFFAQHCGDAEYA----AVIKERNL 594
>gi|225457536|ref|XP_002272226.1| PREDICTED: pentatricopeptide repeat-containing protein At5g42310,
mitochondrial [Vitis vinifera]
gi|297745544|emb|CBI40709.3| unnamed protein product [Vitis vinifera]
Length = 695
Score = 178 bits (451), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 107/409 (26%), Positives = 204/409 (49%), Gaps = 11/409 (2%)
Query: 52 RTRGQPLPKDLVLGTLVRLKQLKKWNVV-SEVLEWLRIQSWWDFNEMDFLML---ITAYG 107
R R P D V + + ++ L + N S +L+ + + D E+D +L I +
Sbjct: 209 RMRRDGFPSDFVNYSFI-IQSLTRTNKSDSSMLQKIYAEIESDKIELDGQLLNDIIVGFA 267
Query: 108 KQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSAL 167
K GD N+A L+ + G +P + A++ A G GR + AEAIF ++ G P
Sbjct: 268 KSGDVNRAMSFLAMVQGNGLSPKTATLVAVITALGNAGRTEEAEAIFEELKEGGLMPRTR 327
Query: 168 TYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLF 227
Y +LK +V+ K+AE + + E+S PD+ + ++I Y AG +E AR +
Sbjct: 328 AYNALLKGYVKTGSLKDAESIVSEM---ERSGFSPDEHTYSLLIDAYANAGRWESARIVL 384
Query: 228 ALMAERGVQQSTVTYNSLMSF---ETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKA 284
M GV+ ++ ++ +++ +++ ++ +M+ +G+ PD Y ++I+ +GK
Sbjct: 385 KEMEASGVRPNSYVFSRILASYRDRGKWQKSFQVLREMRNSGVSPDRHFYNVMIDTFGKC 444
Query: 285 RREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSY 344
+ ALA F+ M GV+P +N L+D SG ++A +F+ M+ CSP +Y
Sbjct: 445 NCLDHALATFDRMRMEGVQPDAVTWNTLIDCHCKSGHHNKAEELFEAMQESGCSPCTTTY 504
Query: 345 TTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRV 404
M++++ E + +++ G + NV+TY TL+ Y + + +E + M+
Sbjct: 505 NIMINSFGEQERWEDVKTLLGKMQSQGLLANVVTYTTLVDIYGQSGRFKDAIECLEVMKS 564
Query: 405 NGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILL 453
G+KP+ T++ +++AY + + A+ ++ M + G P N L+
Sbjct: 565 VGLKPSSTMYNALINAYAQRGLSEQAINAFRVMRADGLKPSVLVLNSLI 613
Score = 168 bits (426), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 95/356 (26%), Positives = 178/356 (50%), Gaps = 6/356 (1%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
L+ Y K G AE ++S M + G++P +++ L++AY GR+++A + + M++SG
Sbjct: 332 LLKGYVKTGSLKDAESIVSEMERSGFSPDEHTYSLLIDAYANAGRWESARIVLKEMEASG 391
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
RP++ + IL + + K++++ F L + S + PD+ +++MI + K +
Sbjct: 392 VRPNSYVFSRILASYRDRGKWQKS---FQVLREMRNSGVSPDRHFYNVMIDTFGKCNCLD 448
Query: 222 KARKLFALMAERGVQQSTVTYNSLMSFET---NYKEVSKIYDQMQRAGLQPDVVSYALLI 278
A F M GVQ VT+N+L+ ++ + ++++ MQ +G P +Y ++I
Sbjct: 449 HALATFDRMRMEGVQPDAVTWNTLIDCHCKSGHHNKAEELFEAMQESGCSPCTTTYNIMI 508
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCS 338
N++G+ R E+ + +M G+ Y L+D + SG A + M+
Sbjct: 509 NSFGEQERWEDVKTLLGKMQSQGLLANVVTYTTLVDIYGQSGRFKDAIECLEVMKSVGLK 568
Query: 339 PDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEI 398
P Y +++AY E A FR ++ DG P+V+ +LI + + + +
Sbjct: 569 PSSTMYNALINAYAQRGLSEQAINAFRVMRADGLKPSVLVLNSLINAFGEDRRDAEAFSV 628
Query: 399 YDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLS 454
M+ N +KP+ +TT+M A + + FD Y+EM G PD+KA+ +L S
Sbjct: 629 LQYMKENDLKPDVVTYTTLMKALIRVEKFDKVPAVYEEMTLSGCTPDRKARAMLRS 684
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 85/394 (21%), Positives = 184/394 (46%), Gaps = 13/394 (3%)
Query: 82 VLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAY 141
++ WL + E+ + +LI A G+ +A F+ + + +++ AL+ A
Sbjct: 140 LVTWLERHNLCFSYELLYSILIHALGRSEKLYEA-----FLLSQRQTLTPLTYNALIGAC 194
Query: 142 GRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEA--EEVFMTLLDEEKSP 199
R + A + RM+ G + Y I++ NK + ++++ + E
Sbjct: 195 ARNDDLEKALNLMSRMRRDGFPSDFVNYSFIIQSLTRTNKSDSSMLQKIYAEI---ESDK 251
Query: 200 LKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETN---YKEVS 256
++ D ++ + +I + K+G +A A++ G+ T T ++++ N +E
Sbjct: 252 IELDGQLLNDIIVGFAKSGDVNRAMSFLAMVQGNGLSPKTATLVAVITALGNAGRTEEAE 311
Query: 257 KIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAF 316
I+++++ GL P +Y L+ Y K ++A ++ EM +G P Y++L+DA+
Sbjct: 312 AIFEELKEGGLMPRTRAYNALLKGYVKTGSLKDAESIVSEMERSGFSPDEHTYSLLIDAY 371
Query: 317 AISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNV 376
A +G + AR V K M P+ ++ +L++Y + + + + R ++ G P+
Sbjct: 372 ANAGRWESARIVLKEMEASGVRPNSYVFSRILASYRDRGKWQKSFQVLREMRNSGVSPDR 431
Query: 377 ITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKE 436
Y +I + K N L+ + +D+MR+ G++P+ + T++D + K+ + A ++
Sbjct: 432 HFYNVMIDTFGKCNCLDHALATFDRMRMEGVQPDAVTWNTLIDCHCKSGHHNKAEELFEA 491
Query: 437 MESCGFPPDQKAKNILLSLAKTADERNEANELLG 470
M+ G P NI+++ + + LLG
Sbjct: 492 MQESGCSPCTTTYNIMINSFGEQERWEDVKTLLG 525
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 115/218 (52%), Gaps = 6/218 (2%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
LI + K G NKAE++ M + G +P ++ ++ ++G R+++ + + +MQS G
Sbjct: 472 LIDCHCKSGHHNKAEELFEAMQESGCSPCTTTYNIMINSFGEQERWEDVKTLLGKMQSQG 531
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
+ +TY ++ ++ ++ +FK+A E + + LKP M++ +I Y + G E
Sbjct: 532 LLANVVTYTTLVDIYGQSGRFKDAIECLEVM---KSVGLKPSSTMYNALINAYAQRGLSE 588
Query: 222 KARKLFALMAERGVQQSTVTYNSLM-SFETNYK--EVSKIYDQMQRAGLQPDVVSYALLI 278
+A F +M G++ S + NSL+ +F + + E + M+ L+PDVV+Y L+
Sbjct: 589 QAINAFRVMRADGLKPSVLVLNSLINAFGEDRRDAEAFSVLQYMKENDLKPDVVTYTTLM 648
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAF 316
A + + ++ AV+EEM +G P KA +L A
Sbjct: 649 KALIRVEKFDKVPAVYEEMTLSGCTPDRKARAMLRSAL 686
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 70/298 (23%), Positives = 145/298 (48%), Gaps = 12/298 (4%)
Query: 154 FRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYM 213
F+ ++S P+ L + ++ L +++ A + L E + + ++ ++I+
Sbjct: 106 FQLVESYRAVPAPLWHSLLKSLCSDSSSIGTAYSLVTWL--ERHNLCFSYELLYSILIH- 162
Query: 214 YKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSK---IYDQMQRAGLQPD 270
G EK + F L+++R + +TYN+L+ ++ K + +M+R G D
Sbjct: 163 --ALGRSEKLYEAF-LLSQRQTL-TPLTYNALIGACARNDDLEKALNLMSRMRRDGFPSD 218
Query: 271 VVSYALLINAYGKARREEEAL--AVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTV 328
V+Y+ +I + + + + ++ ++ E+ + + N ++ FA SG V++A +
Sbjct: 219 FVNYSFIIQSLTRTNKSDSSMLQKIYAEIESDKIELDGQLLNDIIVGFAKSGDVNRAMSF 278
Query: 329 FKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAK 388
++ + SP + +++A NA E AE F LK+ G +P Y L+KGY K
Sbjct: 279 LAMVQGNGLSPKTATLVAVITALGNAGRTEEAEAIFEELKEGGLMPRTRAYNALLKGYVK 338
Query: 389 VNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQ 446
+L+ I +M +G P++ ++ ++DAY ++SA + KEME+ G P+
Sbjct: 339 TGSLKDAESIVSEMERSGFSPDEHTYSLLIDAYANAGRWESARIVLKEMEASGVRPNS 396
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 86/210 (40%), Gaps = 42/210 (20%)
Query: 74 KKWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVS 133
++W V +L ++ Q N + + L+ YG+ G F A + L M G PS
Sbjct: 515 ERWEDVKTLLGKMQSQGLLA-NVVTYTTLVDIYGQSGRFKDAIECLEVMKSVGLKPSSTM 573
Query: 134 HTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLL 193
+ AL+ AY + G + A FR M++ G +PS L ++ F E + EA F L
Sbjct: 574 YNALINAYAQRGLSEQAINAFRVMRADGLKPSVLVLNSLINAFGEDRRDAEA---FSVLQ 630
Query: 194 DEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFET--- 250
+++ LKPD VTY +LM
Sbjct: 631 YMKENDLKPD-----------------------------------VVTYTTLMKALIRVE 655
Query: 251 NYKEVSKIYDQMQRAGLQPDVVSYALLINA 280
+ +V +Y++M +G PD + A+L +A
Sbjct: 656 KFDKVPAVYEEMTLSGCTPDRKARAMLRSA 685
>gi|168038876|ref|XP_001771925.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162676707|gb|EDQ63186.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 831
Score = 178 bits (451), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 111/397 (27%), Positives = 184/397 (46%), Gaps = 44/397 (11%)
Query: 98 DFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRM 157
D +L+ YGK+GD + A M G P+V S+T L+ AY + A A M
Sbjct: 194 DHTLLVNYYGKRGDKHSARAAFESMRAAGIEPNVHSYTNLIHAYAVAQDLRGAIACVEEM 253
Query: 158 QSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKA 217
++ G P+A TY +I+ + + AE F L E + +++ +I+ Y KA
Sbjct: 254 EAEGVSPNAATYSVIISGYGRLGDVEAAERWFQRALSEN---WHHNDVIYNNIIHAYCKA 310
Query: 218 GGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSKIYDQMQR------AGLQPDV 271
G E+A + M E+G++ + YN LM + + V K + +R GL P V
Sbjct: 311 GNMERAEAIMTAMEEQGLEATLGLYNMLMDGYVHCRAVDKCLNVFRRLKARTETGLSPTV 370
Query: 272 VSYALLINAYGKARREEEAL-----------------------------------AVFEE 296
VSY LIN Y K + ++AL +VFE+
Sbjct: 371 VSYGCLINLYSKLGKMDKALQISNEMEDQGIKHNRKTYSMIIDGYVQLGDTANAFSVFED 430
Query: 297 MLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASD 356
M +AG++P YNIL++AF +G +++A + M C P + +YT ++ ++ D
Sbjct: 431 MSNAGIKPDGITYNILMNAFCKNGQMNRALELLARMESGDCPPTLRTYTIIIDGFMKIGD 490
Query: 357 MEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTT 416
+ A + R +K GF P+ TY ++ G A+ +++ I D+M V G+ PN+ +TT
Sbjct: 491 LRMAFETVRDMKMAGFRPSAATYNVIMHGLAQAGQMDRAASIIDEMVVAGVHPNERSYTT 550
Query: 417 IMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILL 453
+++ Y D A ++ ++ G PD A LL
Sbjct: 551 LIEGYACIGDMGLAFKYFNRIKEVGLKPDVIAYASLL 587
Score = 170 bits (431), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 118/424 (27%), Positives = 206/424 (48%), Gaps = 13/424 (3%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + M+I Y + GD A V M+ G P +++ LM A+ + G+ A +
Sbjct: 404 NRKTYSMIIDGYVQLGDTANAFSVFEDMSNAGIKPDGITYNILMNAFCKNGQMNRALELL 463
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
RM+S P+ TY II+ F++ + A F T+ D + + +P ++++++
Sbjct: 464 ARMESGDCPPTLRTYTIIIDGFMKIGDLRMA---FETVRDMKMAGFRPSAATYNVIMHGL 520
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVS---KIYDQMQRAGLQPDV 271
+AG ++A + M GV + +Y +L+ ++ K +++++ GL+PDV
Sbjct: 521 AQAGQMDRAASIIDEMVVAGVHPNERSYTTLIEGYACIGDMGLAFKYFNRIKEVGLKPDV 580
Query: 272 VSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKC 331
++YA L+ A KA R + LA+ EM AGV + YNILLD +A G + +A + +
Sbjct: 581 IAYASLLKACCKAGRMQSTLAITAEMAAAGVPMNNYIYNILLDGWAQRGDMWEASDIMQK 640
Query: 332 MRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNN 391
MR + +PDI SYT+ ++A A DM A + ++KQ G PN+ Y TLI G+A +
Sbjct: 641 MRHEGLTPDIHSYTSFINACCKAGDMLKATETIEQMKQQGVQPNLQAYTTLIHGWASASY 700
Query: 392 LEKMMEIYDKMRVNGIKPNQTIFTTIMD------AYGKNKDFDSAVVWYKEMESCGFPPD 445
EK + YD+M+ G+ P++ ++ IM A + FD + EM G D
Sbjct: 701 PEKALICYDEMKSAGMIPDKPLYHCIMTSLLSRAAVARETVFDGVLRVTSEMVDQGICVD 760
Query: 446 -QKAKNILLSLAKTADERNEANELLGNFNHPNNEPGINGLSISVDEEDDDDDDDEDDDDN 504
AK+ L K + + + + + + + E +D+D D D ++
Sbjct: 761 FATAKHWQRFLIKAERQSGDLTRAVERIFPADWKAAVEEAKRAAQEANDNDLMDYSDVED 820
Query: 505 IYHD 508
+HD
Sbjct: 821 EFHD 824
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 94/403 (23%), Positives = 192/403 (47%), Gaps = 9/403 (2%)
Query: 92 WDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAE 151
W N++ + +I AY K G+ +AE +++ M ++G ++ + LM+ Y
Sbjct: 293 WHHNDVIYNNIIHAYCKAGNMERAEAIMTAMEEQGLEATLGLYNMLMDGYVHCRAVDKCL 352
Query: 152 AIFRRMQS---SGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFH 208
+FRR+++ +G P+ ++Y ++ L+ + K +A ++ + D+ +K ++K +
Sbjct: 353 NVFRRLKARTETGLSPTVVSYGCLINLYSKLGKMDKALQISNEMEDQG---IKHNRKTYS 409
Query: 209 MMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSK---IYDQMQRA 265
M+I Y + G A +F M+ G++ +TYN LM+ ++++ + +M+
Sbjct: 410 MIIDGYVQLGDTANAFSVFEDMSNAGIKPDGITYNILMNAFCKNGQMNRALELLARMESG 469
Query: 266 GLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQA 325
P + +Y ++I+ + K A +M AG RP+ YN+++ A +G +D+A
Sbjct: 470 DCPPTLRTYTIIIDGFMKIGDLRMAFETVRDMKMAGFRPSAATYNVIMHGLAQAGQMDRA 529
Query: 326 RTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKG 385
++ M P+ SYTT++ Y DM A K+F R+K+ G P+VI Y +L+K
Sbjct: 530 ASIIDEMVVAGVHPNERSYTTLIEGYACIGDMGLAFKYFNRIKEVGLKPDVIAYASLLKA 589
Query: 386 YAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPD 445
K ++ + I +M G+ N I+ ++D + + D A ++M G PD
Sbjct: 590 CCKAGRMQSTLAITAEMAAAGVPMNNYIYNILLDGWAQRGDMWEASDIMQKMRHEGLTPD 649
Query: 446 QKAKNILLSLAKTADERNEANELLGNFNHPNNEPGINGLSISV 488
+ ++ A + +A E + +P + + +
Sbjct: 650 IHSYTSFINACCKAGDMLKATETIEQMKQQGVQPNLQAYTTLI 692
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 76/304 (25%), Positives = 145/304 (47%), Gaps = 6/304 (1%)
Query: 192 LLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLM---SF 248
++D K KP Q+ +++ Y K G AR F M G++ + +Y +L+ +
Sbjct: 180 VVDAFKRIKKPKQRDHTLLVNYYGKRGDKHSARAAFESMRAAGIEPNVHSYTNLIHAYAV 239
Query: 249 ETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKA 308
+ + ++M+ G+ P+ +Y+++I+ YG+ E A F+ L
Sbjct: 240 AQDLRGAIACVEEMEAEGVSPNAATYSVIISGYGRLGDVEAAERWFQRALSENWHHNDVI 299
Query: 309 YNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLK 368
YN ++ A+ +G +++A + M + Y ++ YV+ ++ FRRLK
Sbjct: 300 YNNIIHAYCKAGNMERAEAIMTAMEEQGLEATLGLYNMLMDGYVHCRAVDKCLNVFRRLK 359
Query: 369 ---QDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNK 425
+ G P V++YG LI Y+K+ ++K ++I ++M GIK N+ ++ I+D Y +
Sbjct: 360 ARTETGLSPTVVSYGCLINLYSKLGKMDKALQISNEMEDQGIKHNRKTYSMIIDGYVQLG 419
Query: 426 DFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGINGLS 485
D +A +++M + G PD NIL++ + N A ELL + P + +
Sbjct: 420 DTANAFSVFEDMSNAGIKPDGITYNILMNAFCKNGQMNRALELLARMESGDCPPTLRTYT 479
Query: 486 ISVD 489
I +D
Sbjct: 480 IIID 483
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 102/210 (48%), Gaps = 4/210 (1%)
Query: 249 ETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKA 308
E + K+ K+ D +R +P + LL+N YGK + A A FE M AG+ P +
Sbjct: 171 EDHPKDARKVVDAFKRIK-KPKQRDHTLLVNYYGKRGDKHSARAAFESMRAAGIEPNVHS 229
Query: 309 YNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLK 368
Y L+ A+A++ + A + M + SP+ +Y+ ++S Y D+E AE++F+R
Sbjct: 230 YTNLIHAYAVAQDLRGAIACVEEMEAEGVSPNAATYSVIISGYGRLGDVEAAERWFQRAL 289
Query: 369 QDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFD 428
+ + N + Y +I Y K N+E+ I M G++ ++ +MD Y + D
Sbjct: 290 SENWHHNDVIYNNIIHAYCKAGNMERAEAIMTAMEEQGLEATLGLYNMLMDGYVHCRAVD 349
Query: 429 SAVVWYKEMES---CGFPPDQKAKNILLSL 455
+ ++ +++ G P + L++L
Sbjct: 350 KCLNVFRRLKARTETGLSPTVVSYGCLINL 379
>gi|302794530|ref|XP_002979029.1| hypothetical protein SELMODRAFT_109908 [Selaginella moellendorffii]
gi|300153347|gb|EFJ19986.1| hypothetical protein SELMODRAFT_109908 [Selaginella moellendorffii]
Length = 500
Score = 178 bits (451), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 97/336 (28%), Positives = 176/336 (52%), Gaps = 6/336 (1%)
Query: 122 MNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANK 181
M K A +V ++++++++ + + + + + M ++G P + +++ F +N
Sbjct: 1 MRDKNIAANVFTYSSIIKSLVKEAKPEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNN 60
Query: 182 FKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVT 241
++A EV+ +++ S KPD +H++I+ K G +++ K+ + M RG S
Sbjct: 61 MEKAREVYQHMVE---SGYKPDNVSYHILIHGLAKIGKLDESLKILSEMVMRGQTPSMQA 117
Query: 242 YNSLMSFETNYKEV---SKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEML 298
Y+SL+ + V S ++D+M R G PD + + LI +A + ++A F++M
Sbjct: 118 YSSLVRALAKARRVDHASSLFDEMIRGGHHPDRLMFYELILGLCQAGKVKDASERFKQMP 177
Query: 299 DAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDME 358
G +P YN+LL SG ++QA T+F M+ CSPD+ +Y T+L A A +E
Sbjct: 178 KHGCQPNVPVYNVLLHGLCSSGQLEQANTLFAEMKSHSCSPDVVTYNTLLDAVCKARRVE 237
Query: 359 GAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIM 418
K F ++ G+VPNVIT+ TLI G + LEK +E++ M G KPN+ +TT++
Sbjct: 238 EGCKLFEAMRAAGYVPNVITFSTLIHGLCRTGELEKALEVFGSMLEAGCKPNKYTYTTLI 297
Query: 419 DAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLS 454
+ + A +++M PPD A N L++
Sbjct: 298 SGLCRAEKVIQARELFEKMTQACIPPDAVAYNSLIA 333
Score = 168 bits (425), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 98/355 (27%), Positives = 182/355 (51%), Gaps = 9/355 (2%)
Query: 88 IQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRY 147
++S + + + + +LI K G +++ K+LS M +G PS+ ++++L+ A + R
Sbjct: 72 VESGYKPDNVSYHILIHGLAKIGKLDESLKILSEMVMRGQTPSMQAYSSLVRALAKARRV 131
Query: 148 KNAEAIFRRMQSSGPRPSALT-YQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKM 206
+A ++F M G P L Y++IL L +A K K+A E F + K +P+ +
Sbjct: 132 DHASSLFDEMIRGGHHPDRLMFYELILGL-CQAGKVKDASERFKQM---PKHGCQPNVPV 187
Query: 207 FHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEV---SKIYDQMQ 263
++++++ +G E+A LFA M VTYN+L+ + V K+++ M+
Sbjct: 188 YNVLLHGLCSSGQLEQANTLFAEMKSHSCSPDVVTYNTLLDAVCKARRVEEGCKLFEAMR 247
Query: 264 RAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVD 323
AG P+V++++ LI+ + E+AL VF ML+AG +P Y L+ + V
Sbjct: 248 AAGYVPNVITFSTLIHGLCRTGELEKALEVFGSMLEAGCKPNKYTYTTLISGLCRAEKVI 307
Query: 324 QARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQD-GFVPNVITYGTL 382
QAR +F+ M + PD +Y ++++ Y M+ AEK +R + G P ++T+ TL
Sbjct: 308 QARELFEKMTQACIPPDAVAYNSLIAGYCKRGSMDEAEKLYREMSGGAGLQPTIVTFNTL 367
Query: 383 IKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEM 437
I G+ K+ L + E+ +M G+ + + ++ + D A+ YK+M
Sbjct: 368 IDGFCKLGKLGRANELVAEMGTKGLAADSCTYRILIAGLSRATKLDEALEVYKQM 422
Score = 128 bits (321), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 97/422 (22%), Positives = 201/422 (47%), Gaps = 18/422 (4%)
Query: 10 MQKRRKVEVFKDAADEAGKK---NWRRLMNQIEEVGS---AVAVLRSERTRGQPLPKDLV 63
M+K R EV++ + K ++ L++ + ++G ++ +L RGQ P
Sbjct: 61 MEKAR--EVYQHMVESGYKPDNVSYHILIHGLAKIGKLDESLKILSEMVMRGQT-PSMQA 117
Query: 64 LGTLVR-LKQLKKWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFM 122
+LVR L + ++ + S + + + I+ + + F LI + G A + M
Sbjct: 118 YSSLVRALAKARRVDHASSLFDEM-IRGGHHPDRLMFYELILGLCQAGKVKDASERFKQM 176
Query: 123 NKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKF 182
K G P+V + L+ G+ + A +F M+S P +TY +L +A +
Sbjct: 177 PKHGCQPNVPVYNVLLHGLCSSGQLEQANTLFAEMKSHSCSPDVVTYNTLLDAVCKARRV 236
Query: 183 KEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTY 242
+E ++F + + P+ F +I+ + G EKA ++F M E G + + TY
Sbjct: 237 EEGCKLFEAM---RAAGYVPNVITFSTLIHGLCRTGELEKALEVFGSMLEAGCKPNKYTY 293
Query: 243 NSLMSFETNYKEV---SKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLD 299
+L+S ++V +++++M +A + PD V+Y LI Y K +EA ++ EM
Sbjct: 294 TTLISGLCRAEKVIQARELFEKMTQACIPPDAVAYNSLIAGYCKRGSMDEAEKLYREMSG 353
Query: 300 -AGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDME 358
AG++PT +N L+D F G + +A + M + D C+Y +++ A+ ++
Sbjct: 354 GAGLQPTIVTFNTLIDGFCKLGKLGRANELVAEMGTKGLAADSCTYRILIAGLSRATKLD 413
Query: 359 GAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIM 418
A + ++++++ F+ + ++ + + G K N+++ +++ R +G PN F +
Sbjct: 414 EALEVYKQMREKKFLLDPVSCVSFVGGLCKTGNIDQAYAVFEATRKSGAVPNPETFRILS 473
Query: 419 DA 420
++
Sbjct: 474 ES 475
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 64/262 (24%), Positives = 124/262 (47%), Gaps = 3/262 (1%)
Query: 221 EKARKLFALMAERGVQQSTVTYNSLM---SFETNYKEVSKIYDQMQRAGLQPDVVSYALL 277
E++ K+ M G +N +M + N ++ ++Y M +G +PD VSY +L
Sbjct: 27 EESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNNMEKAREVYQHMVESGYKPDNVSYHIL 86
Query: 278 INAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRC 337
I+ K + +E+L + EM+ G P+ +AY+ L+ A A + VD A ++F M R
Sbjct: 87 IHGLAKIGKLDESLKILSEMVMRGQTPSMQAYSSLVRALAKARRVDHASSLFDEMIRGGH 146
Query: 338 SPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMME 397
PD + ++ A ++ A + F+++ + G PNV Y L+ G LE+
Sbjct: 147 HPDRLMFYELILGLCQAGKVKDASERFKQMPKHGCQPNVPVYNVLLHGLCSSGQLEQANT 206
Query: 398 IYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAK 457
++ +M+ + P+ + T++DA K + + ++ M + G+ P+ + L+
Sbjct: 207 LFAEMKSHSCSPDVVTYNTLLDAVCKARRVEEGCKLFEAMRAAGYVPNVITFSTLIHGLC 266
Query: 458 TADERNEANELLGNFNHPNNEP 479
E +A E+ G+ +P
Sbjct: 267 RTGELEKALEVFGSMLEAGCKP 288
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 75/304 (24%), Positives = 144/304 (47%), Gaps = 10/304 (3%)
Query: 101 MLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSS 160
+L+ G +A + + M +P VV++ L++A + R + +F M+++
Sbjct: 190 VLLHGLCSSGQLEQANTLFAEMKSHSCSPDVVTYNTLLDAVCKARRVEEGCKLFEAMRAA 249
Query: 161 GPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGY 220
G P+ +T+ ++ + ++A EVF ++L+ + KP++ + +I +A
Sbjct: 250 GYVPNVITFSTLIHGLCRTGELEKALEVFGSMLE---AGCKPNKYTYTTLISGLCRAEKV 306
Query: 221 EKARKLFALMAERGVQQSTVTYNSLMSFET---NYKEVSKIYDQMQR-AGLQPDVVSYAL 276
+AR+LF M + + V YNSL++ + E K+Y +M AGLQP +V++
Sbjct: 307 IQARELFEKMTQACIPPDAVAYNSLIAGYCKRGSMDEAEKLYREMSGGAGLQPTIVTFNT 366
Query: 277 LINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDR 336
LI+ + K + A + EM G+ Y IL+ + + +D+A V+K MR +
Sbjct: 367 LIDGFCKLGKLGRANELVAEMGTKGLAADSCTYRILIAGLSRATKLDEALEVYKQMREKK 426
Query: 337 CSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLE--- 393
D S + + +++ A F ++ G VPN T+ L + K+ +E
Sbjct: 427 FLLDPVSCVSFVGGLCKTGNIDQAYAVFEATRKSGAVPNPETFRILSESLIKLGRVEDAQ 486
Query: 394 KMME 397
K+ME
Sbjct: 487 KLME 490
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 34/149 (22%), Positives = 71/149 (47%), Gaps = 4/149 (2%)
Query: 332 MRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNN 391
MR + ++ +Y++++ + V + E + K + G P+V + +++G+A+ NN
Sbjct: 1 MRDKNIAANVFTYSSIIKSLVKEAKPEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNN 60
Query: 392 LEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNI 451
+EK E+Y M +G KP+ + ++ K D ++ EM G P +A +
Sbjct: 61 MEKAREVYQHMVESGYKPDNVSYHILIHGLAKIGKLDESLKILSEMVMRGQTPSMQAYSS 120
Query: 452 LLSLAKTADERNEAN----ELLGNFNHPN 476
L+ A + A+ E++ +HP+
Sbjct: 121 LVRALAKARRVDHASSLFDEMIRGGHHPD 149
Score = 45.4 bits (106), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 25/119 (21%), Positives = 52/119 (43%)
Query: 367 LKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKD 426
++ NV TY ++IK K E+ ++ ++M G P+ F +M + ++ +
Sbjct: 1 MRDKNIAANVFTYSSIIKSLVKEAKPEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNN 60
Query: 427 FDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGINGLS 485
+ A Y+ M G+ PD + +IL+ + +E+ ++L P + S
Sbjct: 61 MEKAREVYQHMVESGYKPDNVSYHILIHGLAKIGKLDESLKILSEMVMRGQTPSMQAYS 119
>gi|225429339|ref|XP_002269471.1| PREDICTED: pentatricopeptide repeat-containing protein At5g02860
[Vitis vinifera]
Length = 811
Score = 177 bits (450), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 115/426 (26%), Positives = 205/426 (48%), Gaps = 23/426 (5%)
Query: 63 VLGTLVRLKQLKKWNVVSEVLEWLR--IQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLS 120
VLG + L KK + V EW+R +S N ++I+ GK G + A +L
Sbjct: 130 VLGIVKGLGFYKKCDTALRVFEWVRNRKESELLLNGSIIAVIISILGKGGRVSAAASLLH 189
Query: 121 FMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEAN 180
+ K G+ V ++T+++ A+ GRY+ A +F++M+ G +P+ +TY +IL ++
Sbjct: 190 NLCKDGFDVDVYAYTSMITAFTSNGRYREAVMVFKKMEEVGCKPTLITYNVILNVY---G 246
Query: 181 KFKEAEEVFMTLLDEEKSP-LKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQST 239
K + L+D KS + PD ++ +I ++ YE+A + M G
Sbjct: 247 KMGMPWNKMVGLVDRMKSAGIAPDSYTYNTLISCCRRGNLYEEAAGVLKEMKLAGFSPDK 306
Query: 240 VTYNSLMSF---ETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEE 296
VTYN+L+ KE ++ +M+ G P +V+Y LI+AY + E+AL + +
Sbjct: 307 VTYNALLDVYGKSRRSKEAMEVLQEMEGNGCPPSIVTYNSLISAYARDGLLEDALELKNQ 366
Query: 297 MLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASD 356
M++ G++P Y LL F +G A +F+ MR + C P+IC++ ++ + N
Sbjct: 367 MVEKGIKPDVFTYTTLLSGFEKAGKDKAAVQIFEEMRNEGCKPNICTFNALIKMHGNRGK 426
Query: 357 MEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTT 416
K F +K P+++T+ TL+ + + ++ ++ +M+ G P + F T
Sbjct: 427 FTEMMKVFEDIKTFQCSPDIVTWNTLLSVFGQNGMDSEVSGVFKEMKRAGFVPERDTFNT 486
Query: 417 IMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLS--------------LAKTADER 462
++ +Y + FD A+ YK M G PD + N +L+ LA+ D R
Sbjct: 487 LISSYSRCGSFDQAMAVYKRMLEAGVNPDLSSYNAVLAALARGGLWKQSEKVLAEMKDGR 546
Query: 463 NEANEL 468
+ NEL
Sbjct: 547 CKPNEL 552
Score = 155 bits (391), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 95/371 (25%), Positives = 184/371 (49%), Gaps = 6/371 (1%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
LI+ + + +A VL M G++P V++ AL++ YG+ R K A + + M+ +G
Sbjct: 277 LISCCRRGNLYEEAAGVLKEMKLAGFSPDKVTYNALLDVYGKSRRSKEAMEVLQEMEGNG 336
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
PS +TY ++ + ++A E+ ++++ +KPD + ++ ++KAG +
Sbjct: 337 CPPSIVTYNSLISAYARDGLLEDALELKNQMVEKG---IKPDVFTYTTLLSGFEKAGKDK 393
Query: 222 KARKLFALMAERGVQQSTVTYNSLMSFETN---YKEVSKIYDQMQRAGLQPDVVSYALLI 278
A ++F M G + + T+N+L+ N + E+ K+++ ++ PD+V++ L+
Sbjct: 394 AAVQIFEEMRNEGCKPNICTFNALIKMHGNRGKFTEMMKVFEDIKTFQCSPDIVTWNTLL 453
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCS 338
+ +G+ + E VF+EM AG P +N L+ +++ G DQA V+K M +
Sbjct: 454 SVFGQNGMDSEVSGVFKEMKRAGFVPERDTFNTLISSYSRCGSFDQAMAVYKRMLEAGVN 513
Query: 339 PDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEI 398
PD+ SY +L+A + +EK +K PN +TY +L+ YA +E+M +
Sbjct: 514 PDLSSYNAVLAALARGGLWKQSEKVLAEMKDGRCKPNELTYCSLLHAYANGKEIERMCAL 573
Query: 399 YDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKT 458
+++ I+P + T++ K + E+ GF PD N ++S+
Sbjct: 574 AEEIYSGIIEPRAVLLKTLVLVNSKCDLLMETERAFLELRQRGFSPDITTLNAMVSIYGR 633
Query: 459 ADERNEANELL 469
+ANE+L
Sbjct: 634 RQMVAKANEIL 644
Score = 138 bits (348), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 99/460 (21%), Positives = 196/460 (42%), Gaps = 77/460 (16%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
LI+AY + G A ++ + M +KG P V ++T L+ + + G+ K A IF M++ G
Sbjct: 347 LISAYARDGLLEDALELKNQMVEKGIKPDVFTYTTLLSGFEKAGKDKAAVQIFEEMRNEG 406
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSP---------------------- 199
+P+ T+ ++K+ KF E +VF + + SP
Sbjct: 407 CKPNICTFNALIKMHGNRGKFTEMMKVFEDIKTFQCSPDIVTWNTLLSVFGQNGMDSEVS 466
Query: 200 ----------LKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFE 249
P++ F+ +I Y + G +++A ++ M E GV +YN++++
Sbjct: 467 GVFKEMKRAGFVPERDTFNTLISSYSRCGSFDQAMAVYKRMLEAGVNPDLSSYNAVLAAL 526
Query: 250 TN---YKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRP-- 304
+K+ K+ +M+ +P+ ++Y L++AY + E A+ EE+ + P
Sbjct: 527 ARGGLWKQSEKVLAEMKDGRCKPNELTYCSLLHAYANGKEIERMCALAEEIYSGIIEPRA 586
Query: 305 ------------------THKAY---------------NILLDAFAISGMVDQARTVFKC 331
T +A+ N ++ + MV +A + C
Sbjct: 587 VLLKTLVLVNSKCDLLMETERAFLELRQRGFSPDITTLNAMVSIYGRRQMVAKANEILDC 646
Query: 332 MRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNN 391
M+R +P + +Y +++ Y +++ E +E+ R + G P++I+Y T+I Y +
Sbjct: 647 MKRGGFTPSLTTYNSLMYMYSRSANFERSEEILREILAKGIRPDIISYNTVIYAYCRNGR 706
Query: 392 LEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNI 451
+ + +MR +G P+ + T + +Y + F A+ M G P+Q N
Sbjct: 707 MRDASRVLSEMRESGPAPDIITYNTFIASYAADSMFVEAIDVVCYMIKHGCKPNQSTYNS 766
Query: 452 LLSLAKTADERNEANELLGNFNHPNNEPGINGLSISVDEE 491
++ + R+EA+ + N + IS+DEE
Sbjct: 767 IVDWYCKLNRRDEASMFVNNLRKLDPH-------ISMDEE 799
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 110/426 (25%), Positives = 187/426 (43%), Gaps = 76/426 (17%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
L+ YGK +A +VL M G PS+V++ +L+ AY R G ++A + +M G
Sbjct: 312 LLDVYGKSRRSKEAMEVLQEMEGNGCPPSIVTYNSLISAYARDGLLEDALELKNQMVEKG 371
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
+P TY +L F +A K K A ++F + +E KP+ F+ +I M+ G +
Sbjct: 372 IKPDVFTYTTLLSGFEKAGKDKAAVQIFEEMRNEG---CKPNICTFNALIKMHGNRGKFT 428
Query: 222 KARKLFALMAERGVQQSTVTYNSLMS-FETNY--KEVSKIYDQMQRAGLQPDVVSYALLI 278
+ K+F + VT+N+L+S F N EVS ++ +M+RAG P+ ++ LI
Sbjct: 429 EMMKVFEDIKTFQCSPDIVTWNTLLSVFGQNGMDSEVSGVFKEMKRAGFVPERDTFNTLI 488
Query: 279 NAYGKARREEEALAVFEEMLDAGV-----------------------------------R 303
++Y + ++A+AV++ ML+AGV +
Sbjct: 489 SSYSRCGSFDQAMAVYKRMLEAGVNPDLSSYNAVLAALARGGLWKQSEKVLAEMKDGRCK 548
Query: 304 PTHKAYNILLDAFA---------------ISGMVDQARTVFK--------C--------- 331
P Y LL A+A SG+++ + K C
Sbjct: 549 PNELTYCSLLHAYANGKEIERMCALAEEIYSGIIEPRAVLLKTLVLVNSKCDLLMETERA 608
Query: 332 ---MRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAK 388
+R+ SPDI + M+S Y + A + +K+ GF P++ TY +L+ Y++
Sbjct: 609 FLELRQRGFSPDITTLNAMVSIYGRRQMVAKANEILDCMKRGGFTPSLTTYNSLMYMYSR 668
Query: 389 VNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKA 448
N E+ EI ++ GI+P+ + T++ AY +N A EM G PD
Sbjct: 669 SANFERSEEILREILAKGIRPDIISYNTVIYAYCRNGRMRDASRVLSEMRESGPAPDIIT 728
Query: 449 KNILLS 454
N ++
Sbjct: 729 YNTFIA 734
Score = 91.7 bits (226), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 107/227 (47%), Gaps = 1/227 (0%)
Query: 256 SKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDA 315
+ + + + G DV +Y +I A+ R EA+ VF++M + G +PT YN++L+
Sbjct: 185 ASLLHNLCKDGFDVDVYAYTSMITAFTSNGRYREAVMVFKKMEEVGCKPTLITYNVILNV 244
Query: 316 FAISGMV-DQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVP 374
+ GM ++ + M+ +PD +Y T++S + E A + +K GF P
Sbjct: 245 YGKMGMPWNKMVGLVDRMKSAGIAPDSYTYNTLISCCRRGNLYEEAAGVLKEMKLAGFSP 304
Query: 375 NVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWY 434
+ +TY L+ Y K ++ ME+ +M NG P+ + +++ AY ++ + A+
Sbjct: 305 DKVTYNALLDVYGKSRRSKEAMEVLQEMEGNGCPPSIVTYNSLISAYARDGLLEDALELK 364
Query: 435 KEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGI 481
+M G PD LLS + A + A ++ + +P I
Sbjct: 365 NQMVEKGIKPDVFTYTTLLSGFEKAGKDKAAVQIFEEMRNEGCKPNI 411
>gi|222634970|gb|EEE65102.1| hypothetical protein OsJ_20158 [Oryza sativa Japonica Group]
Length = 552
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 105/390 (26%), Positives = 205/390 (52%), Gaps = 9/390 (2%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + +L+ A +G +A V+ M G AP+ V++ L+ A+ R G AE +
Sbjct: 9 NVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELDGAERVV 68
Query: 155 RRMQSSG-PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYM 213
M+ G +P+ +T+ ++ +A + + A +VF ++ E L PD ++ ++
Sbjct: 69 SLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVRE---GLAPDVVSYNTLLSG 125
Query: 214 YKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFET---NYKEVSKIYDQMQRAGLQPD 270
Y K G ++ +F+ M +RG+ VT+ SL+ N ++ + QM+ GL+ +
Sbjct: 126 YCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMN 185
Query: 271 VVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFK 330
V++ LI+ + K ++AL EEM G++P+ YN L++ + G +D AR + +
Sbjct: 186 EVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIR 245
Query: 331 CMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVN 390
M R PD+ +Y+T++S Y +++ A + +++ + G +P+ ITY +LI+G +
Sbjct: 246 EMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEK 305
Query: 391 NLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKN 450
L E+++ M G++P++ +TT++D + K + + A+ + EM G PD +
Sbjct: 306 RLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYS 365
Query: 451 ILLS-LAKTADERNEANELLGNFNHPNNEP 479
+L++ L+K+A + EA+ LL H + P
Sbjct: 366 VLINGLSKSARTK-EAHRLLFKLYHEDPVP 394
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 84/365 (23%), Positives = 176/365 (48%), Gaps = 21/365 (5%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
L++ Y K G +++ V S M ++G P VV+ T+L+ A + G + A A+ +M+ G
Sbjct: 122 LLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERG 181
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
R + +T+ ++ F + +A + + + K ++P ++ +I Y K G +
Sbjct: 182 LRMNEVTFTALIDGFCKKGFLDDA---LLAVEEMRKCGIQPSVVCYNALINGYCKLGRMD 238
Query: 222 KARKLFALMAERGVQQSTVTYNSLMSFET---NYKEVSKIYDQMQRAGLQPDVVSYALLI 278
AR+L M + V+ VTY++++S N ++ +M + G+ PD ++Y+ LI
Sbjct: 239 LARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLI 298
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCS 338
+ +R +A +FE ML GV+P Y L+D G V++A ++ M R
Sbjct: 299 RGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVL 358
Query: 339 PDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTL---------------I 383
PD+ +Y+ +++ ++ + A + +L + VP+ I Y L +
Sbjct: 359 PDVVTYSVLINGLSKSARTKEAHRLLFKLYHEDPVPDNIKYDALMLCCSKAEFKSVVALL 418
Query: 384 KGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFP 443
KG+ +++ ++Y M K + ++++ ++ + + + A+ ++K+M GF
Sbjct: 419 KGFCMKGLMKEADKVYQSMLDRNWKLDGSVYSILIHGHCRGGNVRKALSFHKQMLRSGFS 478
Query: 444 PDQKA 448
P+ +
Sbjct: 479 PNSTS 483
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 68/229 (29%), Positives = 114/229 (49%), Gaps = 4/229 (1%)
Query: 230 MAERGVQQSTVTYNSL---MSFETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARR 286
M GV + TYN L + +E + M+ AG P+ V+Y L+ A+ +A
Sbjct: 1 MVRHGVAPNVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGE 60
Query: 287 EEEALAVFEEMLDAG-VRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYT 345
+ A V M + G +P +N +++ +G ++ AR VF M R+ +PD+ SY
Sbjct: 61 LDGAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYN 120
Query: 346 TMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVN 405
T+LS Y + + F + Q G VP+V+T+ +LI K NLE+ + + +MR
Sbjct: 121 TLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRER 180
Query: 406 GIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLS 454
G++ N+ FT ++D + K D A++ +EM CG P N L++
Sbjct: 181 GLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALIN 229
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 91/380 (23%), Positives = 168/380 (44%), Gaps = 43/380 (11%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYA-PSVVSHTALMEAYGRGGRYKNAEAI 153
N + + L+ A+ + G+ + AE+V+S M ++G A P++V+ +++ + GR + A +
Sbjct: 44 NAVTYNTLVAAFCRAGELDGAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKV 103
Query: 154 FRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYM 213
F M G P ++Y +L + + E+ VF + + L PD F +I+
Sbjct: 104 FDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEM---TQRGLVPDVVTFTSLIHA 160
Query: 214 YKKAGGYEKARKLFALMAERG-----------------------------------VQQS 238
KAG E+A L A M ERG +Q S
Sbjct: 161 TCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPS 220
Query: 239 TVTYNSLMSFETNYKEV---SKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFE 295
V YN+L++ + ++ +M+ ++PDVV+Y+ +I+ Y K + A + +
Sbjct: 221 VVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQ 280
Query: 296 EMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNAS 355
+ML GV P Y+ L+ ++ A +F+ M + PD +YTT++ +
Sbjct: 281 KMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEG 340
Query: 356 DMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFT 415
++E A + + G +P+V+TY LI G +K ++ + K+ P+ +
Sbjct: 341 NVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKEAHRLLFKLYHEDPVPDNIKYD 400
Query: 416 TIMDAYGKNKDFDSAVVWYK 435
+M K +F S V K
Sbjct: 401 ALMLCCSK-AEFKSVVALLK 419
Score = 115 bits (287), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 79/310 (25%), Positives = 144/310 (46%), Gaps = 21/310 (6%)
Query: 94 FNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAI 153
NE+ F LI + K+G + A + M K G PSVV + AL+ Y + GR A +
Sbjct: 184 MNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLAREL 243
Query: 154 FRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYM 213
R M++ +P +TY I+ + + A ++ +L K + PD + +I
Sbjct: 244 IREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKML---KKGVLPDAITYSSLIRG 300
Query: 214 YKKAGGYEKARKLFALMAERGVQQSTVTYNSLM---SFETNYKEVSKIYDQMQRAGLQPD 270
+ A +LF M + GVQ TY +L+ E N ++ ++D+M R G+ PD
Sbjct: 301 LCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPD 360
Query: 271 VVSYALLINAYGKARREEEALAV---------------FEEMLDAGVRPTHKAYNILLDA 315
VV+Y++LIN K+ R +EA + ++ ++ + K+ LL
Sbjct: 361 VVTYSVLINGLSKSARTKEAHRLLFKLYHEDPVPDNIKYDALMLCCSKAEFKSVVALLKG 420
Query: 316 FAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPN 375
F + G++ +A V++ M D Y+ ++ + ++ A F +++ + GF PN
Sbjct: 421 FCMKGLMKEADKVYQSMLDRNWKLDGSVYSILIHGHCRGGNVRKALSFHKQMLRSGFSPN 480
Query: 376 VITYGTLIKG 385
+ +L++G
Sbjct: 481 STSTISLVRG 490
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 62/277 (22%), Positives = 110/277 (39%), Gaps = 56/277 (20%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
LI Y K G + A +++ M K P VV+++ ++ Y + G +A + ++M G
Sbjct: 227 LINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKG 286
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
P A+TY +++ E + +A E+F +L + ++PD+ + +I + K G E
Sbjct: 287 VLPDAITYSSLIRGLCEEKRLNDACELFENML---QLGVQPDEFTYTTLIDGHCKEGNVE 343
Query: 222 KARKLFALMAERGVQQSTVT-----------------------------------YNSLM 246
KA L M +GV VT Y++LM
Sbjct: 344 KALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKEAHRLLFKLYHEDPVPDNIKYDALM 403
Query: 247 ------------------SFETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREE 288
+ KE K+Y M + D Y++LI+ + +
Sbjct: 404 LCCSKAEFKSVVALLKGFCMKGLMKEADKVYQSMLDRNWKLDGSVYSILIHGHCRGGNVR 463
Query: 289 EALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQA 325
+AL+ ++ML +G P + L+ GMV +A
Sbjct: 464 KALSFHKQMLRSGFSPNSTSTISLVRGLFEEGMVVEA 500
>gi|297737955|emb|CBI27156.3| unnamed protein product [Vitis vinifera]
Length = 625
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 105/378 (27%), Positives = 188/378 (49%), Gaps = 6/378 (1%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
E + +L+ AY G KAE V + M K G+ PS V + A ++ +GG + A IF
Sbjct: 240 TEDTYALLLKAYCTSGLLEKAEAVFAEMRKYGFPPSAVVYNAYIDGLMKGGDTQKAVEIF 299
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
RM+ +PS TY +++ L+ +A+K A +VF + ++ KP+ F ++ +
Sbjct: 300 ERMKRDRCQPSTATYTMLINLYGKASKSYMALKVFHEMRSQK---CKPNICTFTALVNAF 356
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYK---EVSKIYDQMQRAGLQPDV 271
+ G EKA ++F + E G++ YN+LM + ++I+ MQ G +PD
Sbjct: 357 AREGLCEKAEEIFEQLQEAGLEPDVYAYNALMEAYSRAGFPYGAAEIFSLMQHMGCEPDR 416
Query: 272 VSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKC 331
SY ++++AYG+A E+A AVFE M G+ PT K++ +LL A++ +G V + +
Sbjct: 417 ASYNIMVDAYGRAGLHEDAQAVFEVMKRLGITPTMKSHMLLLSAYSRAGKVAKCEEIVNQ 476
Query: 332 MRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNN 391
M + PD +ML+ Y E E+ +++ + ++ TY LI Y +
Sbjct: 477 MHKSGIKPDTFVLNSMLNLYGRLGQFEKMEEVLTAMEKGPYPADISTYNILINIYGRAGF 536
Query: 392 LEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNI 451
+M E++ + + P+ +T+ + AY + K ++ + ++EM G PD +
Sbjct: 537 FARMEELFRSLPARNLIPDVVTWTSRIGAYSRRKQYNRCLEVFEEMIDAGCYPDGGTAKV 596
Query: 452 LLSLAKTADERNEANELL 469
LLS D+ E ++
Sbjct: 597 LLSACSNGDQIQEVTTVI 614
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 106/412 (25%), Positives = 194/412 (47%), Gaps = 31/412 (7%)
Query: 76 WNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHT 135
W+ + V LR+ WD ++LI + + + + P V+ +
Sbjct: 170 WDDIINVAVQLRLNKQWDA-----IVLICGW--------------ILYRSSFHPDVICYN 210
Query: 136 ALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDE 195
L++AYG+ YK AE+ + + + P+ TY ++LK + + ++AE VF +
Sbjct: 211 LLIDAYGQKSLYKKAESTYLELLEARCVPTEDTYALLLKAYCTSGLLEKAEAVFAEM--- 267
Query: 196 EKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEV 255
K P +++ I K G +KA ++F M Q ST TY L++ Y +
Sbjct: 268 RKYGFPPSAVVYNAYIDGLMKGGDTQKAVEIFERMKRDRCQPSTATYTMLINL---YGKA 324
Query: 256 SK------IYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAY 309
SK ++ +M+ +P++ ++ L+NA+ + E+A +FE++ +AG+ P AY
Sbjct: 325 SKSYMALKVFHEMRSQKCKPNICTFTALVNAFAREGLCEKAEEIFEQLQEAGLEPDVYAY 384
Query: 310 NILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQ 369
N L++A++ +G A +F M+ C PD SY M+ AY A E A+ F +K+
Sbjct: 385 NALMEAYSRAGFPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHEDAQAVFEVMKR 444
Query: 370 DGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDS 429
G P + ++ L+ Y++ + K EI ++M +GIKP+ + ++++ YG+ F+
Sbjct: 445 LGITPTMKSHMLLLSAYSRAGKVAKCEEIVNQMHKSGIKPDTFVLNSMLNLYGRLGQFEK 504
Query: 430 AVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGI 481
ME +P D NIL+++ A EL + N P +
Sbjct: 505 MEEVLTAMEKGPYPADISTYNILINIYGRAGFFARMEELFRSLPARNLIPDV 556
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 67/228 (29%), Positives = 112/228 (49%)
Query: 262 MQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGM 321
+ R+ PDV+ Y LLI+AYG+ ++A + + E+L+A PT Y +LL A+ SG+
Sbjct: 197 LYRSSFHPDVICYNLLIDAYGQKSLYKKAESTYLELLEARCVPTEDTYALLLKAYCTSGL 256
Query: 322 VDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGT 381
+++A VF MR+ P Y + + D + A + F R+K+D P+ TY
Sbjct: 257 LEKAEAVFAEMRKYGFPPSAVVYNAYIDGLMKGGDTQKAVEIFERMKRDRCQPSTATYTM 316
Query: 382 LIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCG 441
LI Y K + ++++ +MR KPN FT +++A+ + + A +++++ G
Sbjct: 317 LINLYGKASKSYMALKVFHEMRSQKCKPNICTFTALVNAFAREGLCEKAEEIFEQLQEAG 376
Query: 442 FPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGINGLSISVD 489
PD A N L+ A A E+ H EP +I VD
Sbjct: 377 LEPDVYAYNALMEAYSRAGFPYGAAEIFSLMQHMGCEPDRASYNIMVD 424
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 66/237 (27%), Positives = 119/237 (50%), Gaps = 6/237 (2%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
L+ AY + G A ++ S M G P S+ +++AYGR G +++A+A+F M+ G
Sbjct: 387 LMEAYSRAGFPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHEDAQAVFEVMKRLG 446
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
P+ ++ ++L + A K + EE+ + KS +KPD + + M+ +Y + G +E
Sbjct: 447 ITPTMKSHMLLLSAYSRAGKVAKCEEIVNQM---HKSGIKPDTFVLNSMLNLYGRLGQFE 503
Query: 222 KARKLFALMAERGVQQSTVTYNSLMSFETN---YKEVSKIYDQMQRAGLQPDVVSYALLI 278
K ++ M + TYN L++ + + +++ + L PDVV++ I
Sbjct: 504 KMEEVLTAMEKGPYPADISTYNILINIYGRAGFFARMEELFRSLPARNLIPDVVTWTSRI 563
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRD 335
AY + ++ L VFEEM+DAG P +LL A + + + TV + M +D
Sbjct: 564 GAYSRRKQYNRCLEVFEEMIDAGCYPDGGTAKVLLSACSNGDQIQEVTTVIRTMHKD 620
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 73/307 (23%), Positives = 144/307 (46%), Gaps = 6/307 (1%)
Query: 99 FLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQ 158
+ MLI YGK A KV M + P++ + TAL+ A+ R G + AE IF ++Q
Sbjct: 314 YTMLINLYGKASKSYMALKVFHEMRSQKCKPNICTFTALVNAFAREGLCEKAEEIFEQLQ 373
Query: 159 SSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAG 218
+G P Y +++ + A A E+F + + +PD+ +++M+ Y +AG
Sbjct: 374 EAGLEPDVYAYNALMEAYSRAGFPYGAAEIFSLM---QHMGCEPDRASYNIMVDAYGRAG 430
Query: 219 GYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSK---IYDQMQRAGLQPDVVSYA 275
+E A+ +F +M G+ + ++ L+S + +V+K I +QM ++G++PD
Sbjct: 431 LHEDAQAVFEVMKRLGITPTMKSHMLLLSAYSRAGKVAKCEEIVNQMHKSGIKPDTFVLN 490
Query: 276 LLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRD 335
++N YG+ + E+ V M YNIL++ + +G + +F+ +
Sbjct: 491 SMLNLYGRLGQFEKMEEVLTAMEKGPYPADISTYNILINIYGRAGFFARMEELFRSLPAR 550
Query: 336 RCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKM 395
PD+ ++T+ + AY + F + G P+ T L+ + + ++++
Sbjct: 551 NLIPDVVTWTSRIGAYSRRKQYNRCLEVFEEMIDAGCYPDGGTAKVLLSACSNGDQIQEV 610
Query: 396 MEIYDKM 402
+ M
Sbjct: 611 TTVIRTM 617
Score = 47.8 bits (112), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 34/146 (23%), Positives = 66/146 (45%), Gaps = 8/146 (5%)
Query: 59 PKDLVLGTLV----RLKQLKKWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNK 114
P VL +++ RL Q +K V +E + + + + +LI YG+ G F +
Sbjct: 484 PDTFVLNSMLNLYGRLGQFEKMEEVLTAME----KGPYPADISTYNILINIYGRAGFFAR 539
Query: 115 AEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILK 174
E++ + + P VV+ T+ + AY R +Y +F M +G P T +++L
Sbjct: 540 MEELFRSLPARNLIPDVVTWTSRIGAYSRRKQYNRCLEVFEEMIDAGCYPDGGTAKVLLS 599
Query: 175 LFVEANKFKEAEEVFMTLLDEEKSPL 200
++ +E V T+ + ++ L
Sbjct: 600 ACSNGDQIQEVTTVIRTMHKDMRTSL 625
>gi|225423724|ref|XP_002276864.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g35130-like [Vitis vinifera]
Length = 587
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 105/378 (27%), Positives = 188/378 (49%), Gaps = 6/378 (1%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
E + +L+ AY G KAE V + M K G+ PS V + A ++ +GG + A IF
Sbjct: 202 TEDTYALLLKAYCTSGLLEKAEAVFAEMRKYGFPPSAVVYNAYIDGLMKGGDTQKAVEIF 261
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
RM+ +PS TY +++ L+ +A+K A +VF + ++ KP+ F ++ +
Sbjct: 262 ERMKRDRCQPSTATYTMLINLYGKASKSYMALKVFHEMRSQK---CKPNICTFTALVNAF 318
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYK---EVSKIYDQMQRAGLQPDV 271
+ G EKA ++F + E G++ YN+LM + ++I+ MQ G +PD
Sbjct: 319 AREGLCEKAEEIFEQLQEAGLEPDVYAYNALMEAYSRAGFPYGAAEIFSLMQHMGCEPDR 378
Query: 272 VSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKC 331
SY ++++AYG+A E+A AVFE M G+ PT K++ +LL A++ +G V + +
Sbjct: 379 ASYNIMVDAYGRAGLHEDAQAVFEVMKRLGITPTMKSHMLLLSAYSRAGKVAKCEEIVNQ 438
Query: 332 MRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNN 391
M + PD +ML+ Y E E+ +++ + ++ TY LI Y +
Sbjct: 439 MHKSGIKPDTFVLNSMLNLYGRLGQFEKMEEVLTAMEKGPYPADISTYNILINIYGRAGF 498
Query: 392 LEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNI 451
+M E++ + + P+ +T+ + AY + K ++ + ++EM G PD +
Sbjct: 499 FARMEELFRSLPARNLIPDVVTWTSRIGAYSRRKQYNRCLEVFEEMIDAGCYPDGGTAKV 558
Query: 452 LLSLAKTADERNEANELL 469
LLS D+ E ++
Sbjct: 559 LLSACSNGDQIQEVTTVI 576
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 106/412 (25%), Positives = 194/412 (47%), Gaps = 31/412 (7%)
Query: 76 WNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHT 135
W+ + V LR+ WD ++LI + + + + P V+ +
Sbjct: 132 WDDIINVAVQLRLNKQWDA-----IVLICGW--------------ILYRSSFHPDVICYN 172
Query: 136 ALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDE 195
L++AYG+ YK AE+ + + + P+ TY ++LK + + ++AE VF +
Sbjct: 173 LLIDAYGQKSLYKKAESTYLELLEARCVPTEDTYALLLKAYCTSGLLEKAEAVFAEM--- 229
Query: 196 EKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEV 255
K P +++ I K G +KA ++F M Q ST TY L++ Y +
Sbjct: 230 RKYGFPPSAVVYNAYIDGLMKGGDTQKAVEIFERMKRDRCQPSTATYTMLINL---YGKA 286
Query: 256 SK------IYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAY 309
SK ++ +M+ +P++ ++ L+NA+ + E+A +FE++ +AG+ P AY
Sbjct: 287 SKSYMALKVFHEMRSQKCKPNICTFTALVNAFAREGLCEKAEEIFEQLQEAGLEPDVYAY 346
Query: 310 NILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQ 369
N L++A++ +G A +F M+ C PD SY M+ AY A E A+ F +K+
Sbjct: 347 NALMEAYSRAGFPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHEDAQAVFEVMKR 406
Query: 370 DGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDS 429
G P + ++ L+ Y++ + K EI ++M +GIKP+ + ++++ YG+ F+
Sbjct: 407 LGITPTMKSHMLLLSAYSRAGKVAKCEEIVNQMHKSGIKPDTFVLNSMLNLYGRLGQFEK 466
Query: 430 AVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGI 481
ME +P D NIL+++ A EL + N P +
Sbjct: 467 MEEVLTAMEKGPYPADISTYNILINIYGRAGFFARMEELFRSLPARNLIPDV 518
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 67/228 (29%), Positives = 112/228 (49%)
Query: 262 MQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGM 321
+ R+ PDV+ Y LLI+AYG+ ++A + + E+L+A PT Y +LL A+ SG+
Sbjct: 159 LYRSSFHPDVICYNLLIDAYGQKSLYKKAESTYLELLEARCVPTEDTYALLLKAYCTSGL 218
Query: 322 VDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGT 381
+++A VF MR+ P Y + + D + A + F R+K+D P+ TY
Sbjct: 219 LEKAEAVFAEMRKYGFPPSAVVYNAYIDGLMKGGDTQKAVEIFERMKRDRCQPSTATYTM 278
Query: 382 LIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCG 441
LI Y K + ++++ +MR KPN FT +++A+ + + A +++++ G
Sbjct: 279 LINLYGKASKSYMALKVFHEMRSQKCKPNICTFTALVNAFAREGLCEKAEEIFEQLQEAG 338
Query: 442 FPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGINGLSISVD 489
PD A N L+ A A E+ H EP +I VD
Sbjct: 339 LEPDVYAYNALMEAYSRAGFPYGAAEIFSLMQHMGCEPDRASYNIMVD 386
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 66/237 (27%), Positives = 119/237 (50%), Gaps = 6/237 (2%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
L+ AY + G A ++ S M G P S+ +++AYGR G +++A+A+F M+ G
Sbjct: 349 LMEAYSRAGFPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHEDAQAVFEVMKRLG 408
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
P+ ++ ++L + A K + EE+ + KS +KPD + + M+ +Y + G +E
Sbjct: 409 ITPTMKSHMLLLSAYSRAGKVAKCEEIVNQM---HKSGIKPDTFVLNSMLNLYGRLGQFE 465
Query: 222 KARKLFALMAERGVQQSTVTYNSLMSFETN---YKEVSKIYDQMQRAGLQPDVVSYALLI 278
K ++ M + TYN L++ + + +++ + L PDVV++ I
Sbjct: 466 KMEEVLTAMEKGPYPADISTYNILINIYGRAGFFARMEELFRSLPARNLIPDVVTWTSRI 525
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRD 335
AY + ++ L VFEEM+DAG P +LL A + + + TV + M +D
Sbjct: 526 GAYSRRKQYNRCLEVFEEMIDAGCYPDGGTAKVLLSACSNGDQIQEVTTVIRTMHKD 582
Score = 112 bits (280), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 73/307 (23%), Positives = 144/307 (46%), Gaps = 6/307 (1%)
Query: 99 FLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQ 158
+ MLI YGK A KV M + P++ + TAL+ A+ R G + AE IF ++Q
Sbjct: 276 YTMLINLYGKASKSYMALKVFHEMRSQKCKPNICTFTALVNAFAREGLCEKAEEIFEQLQ 335
Query: 159 SSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAG 218
+G P Y +++ + A A E+F + + +PD+ +++M+ Y +AG
Sbjct: 336 EAGLEPDVYAYNALMEAYSRAGFPYGAAEIFSLM---QHMGCEPDRASYNIMVDAYGRAG 392
Query: 219 GYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSK---IYDQMQRAGLQPDVVSYA 275
+E A+ +F +M G+ + ++ L+S + +V+K I +QM ++G++PD
Sbjct: 393 LHEDAQAVFEVMKRLGITPTMKSHMLLLSAYSRAGKVAKCEEIVNQMHKSGIKPDTFVLN 452
Query: 276 LLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRD 335
++N YG+ + E+ V M YNIL++ + +G + +F+ +
Sbjct: 453 SMLNLYGRLGQFEKMEEVLTAMEKGPYPADISTYNILINIYGRAGFFARMEELFRSLPAR 512
Query: 336 RCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKM 395
PD+ ++T+ + AY + F + G P+ T L+ + + ++++
Sbjct: 513 NLIPDVVTWTSRIGAYSRRKQYNRCLEVFEEMIDAGCYPDGGTAKVLLSACSNGDQIQEV 572
Query: 396 MEIYDKM 402
+ M
Sbjct: 573 TTVIRTM 579
Score = 47.4 bits (111), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 34/146 (23%), Positives = 66/146 (45%), Gaps = 8/146 (5%)
Query: 59 PKDLVLGTLV----RLKQLKKWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNK 114
P VL +++ RL Q +K V +E + + + + +LI YG+ G F +
Sbjct: 446 PDTFVLNSMLNLYGRLGQFEKMEEVLTAME----KGPYPADISTYNILINIYGRAGFFAR 501
Query: 115 AEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILK 174
E++ + + P VV+ T+ + AY R +Y +F M +G P T +++L
Sbjct: 502 MEELFRSLPARNLIPDVVTWTSRIGAYSRRKQYNRCLEVFEEMIDAGCYPDGGTAKVLLS 561
Query: 175 LFVEANKFKEAEEVFMTLLDEEKSPL 200
++ +E V T+ + ++ L
Sbjct: 562 ACSNGDQIQEVTTVIRTMHKDMRTSL 587
>gi|168007580|ref|XP_001756486.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162692525|gb|EDQ78882.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 528
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 117/404 (28%), Positives = 189/404 (46%), Gaps = 6/404 (1%)
Query: 99 FLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQ 158
F LI G+F +AE V + +KG ++ L+ +GR G+ +A +FR M+
Sbjct: 68 FTKLIDILVNSGEFERAELVYKKLVQKGCQLDRFAYNVLIRYFGRSGQLDSAMEMFREMK 127
Query: 159 SSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAG 218
G P TY ++ +A + +EA F +L+ L P+ +++++ ++K G
Sbjct: 128 IKGSEPDEYTYGFLVNALGKAGRVQEARSFFDAMLER---GLTPNIPTYNLLMDAFRKVG 184
Query: 219 GYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVS---KIYDQMQRAGLQPDVVSYA 275
+ A LFA M RG Q S VTYN L+ + V K++ +M G PD +Y+
Sbjct: 185 QLDMALGLFAEMKRRGFQPSVVTYNILLDALCSAGRVGAARKLFHKMTGDGCSPDSYTYS 244
Query: 276 LLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRD 335
L+N GK+ R EEA VF EM+D GV YN LL A +G +D+ + K M R
Sbjct: 245 TLVNGLGKSGRVEEAHKVFREMVDRGVAVDLVNYNSLLATLAKAGNMDRVWKLMKEMSRK 304
Query: 336 RCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKM 395
PD S+ T++ A A+ + A + F R+ + G P++I+Y LI YA+ + +
Sbjct: 305 GFHPDAFSFNTIMDALGKANKPDAAREVFARMVESGCKPDLISYNILIDSYARFGDAAQA 364
Query: 396 MEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSL 455
++ ++M G P + +++ + D A +EME+ G PD N L+ +
Sbjct: 365 RQMLEEMVEAGFIPETKTYNSLIHWLATDGQVDEAFAVLEEMETAGCRPDVVTYNRLMDM 424
Query: 456 AKTADERNEANELLGNFNHPNNEPGINGLSISVDEEDDDDDDDE 499
E A L EP ++ +D DD DE
Sbjct: 425 LGKRGENQRAARLFQQMKDKGVEPDTLSYAVRIDGLAFDDRLDE 468
Score = 169 bits (427), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 101/368 (27%), Positives = 183/368 (49%), Gaps = 6/368 (1%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
+E + L+ A GK G +A M ++G P++ ++ LM+A+ + G+ A +F
Sbjct: 134 DEYTYGFLVNALGKAGRVQEARSFFDAMLERGLTPNIPTYNLLMDAFRKVGQLDMALGLF 193
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
M+ G +PS +TY I+L A + A ++F + + SP D + ++
Sbjct: 194 AEMKRRGFQPSVVTYNILLDALCSAGRVGAARKLFHKMTGDGCSP---DSYTYSTLVNGL 250
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSLMSF---ETNYKEVSKIYDQMQRAGLQPDV 271
K+G E+A K+F M +RGV V YNSL++ N V K+ +M R G PD
Sbjct: 251 GKSGRVEEAHKVFREMVDRGVAVDLVNYNSLLATLAKAGNMDRVWKLMKEMSRKGFHPDA 310
Query: 272 VSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKC 331
S+ +++A GKA + + A VF M+++G +P +YNIL+D++A G QAR + +
Sbjct: 311 FSFNTIMDALGKANKPDAAREVFARMVESGCKPDLISYNILIDSYARFGDAAQARQMLEE 370
Query: 332 MRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNN 391
M P+ +Y +++ ++ A ++ G P+V+TY L+ K
Sbjct: 371 MVEAGFIPETKTYNSLIHWLATDGQVDEAFAVLEEMETAGCRPDVVTYNRLMDMLGKRGE 430
Query: 392 LEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNI 451
++ ++ +M+ G++P+ + +D + D A+V +K+M++ G P D+ I
Sbjct: 431 NQRAARLFQQMKDKGVEPDTLSYAVRIDGLAFDDRLDEALVLFKDMKAVGCPVDKAMYRI 490
Query: 452 LLSLAKTA 459
L+ A A
Sbjct: 491 LIRAAHRA 498
Score = 162 bits (409), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 103/363 (28%), Positives = 183/363 (50%), Gaps = 7/363 (1%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
++ G + E +L M +G + L+ AYGRG + +A +F + +S
Sbjct: 1 MLVVLASWGILDPLETLLKEMVAEGRPLRPNTLVKLITAYGRGNKSGDAFDLFNQAESFA 60
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
P+ + ++ + V + +F+ AE V+ L+ + + D+ ++++I + ++G +
Sbjct: 61 CSPTVHAFTKLIDILVNSGEFERAELVYKKLV---QKGCQLDRFAYNVLIRYFGRSGQLD 117
Query: 222 KARKLFALMAERGVQQSTVTYNSLMSF---ETNYKEVSKIYDQMQRAGLQPDVVSYALLI 278
A ++F M +G + TY L++ +E +D M GL P++ +Y LL+
Sbjct: 118 SAMEMFREMKIKGSEPDEYTYGFLVNALGKAGRVQEARSFFDAMLERGLTPNIPTYNLLM 177
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCS 338
+A+ K + + AL +F EM G +P+ YNILLDA +G V AR +F M D CS
Sbjct: 178 DAFRKVGQLDMALGLFAEMKRRGFQPSVVTYNILLDALCSAGRVGAARKLFHKMTGDGCS 237
Query: 339 PDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEI 398
PD +Y+T+++ + +E A K FR + G +++ Y +L+ AK N++++ ++
Sbjct: 238 PDSYTYSTLVNGLGKSGRVEEAHKVFREMVDRGVAVDLVNYNSLLATLAKAGNMDRVWKL 297
Query: 399 YDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILL-SLAK 457
+M G P+ F TIMDA GK D+A + M G PD + NIL+ S A+
Sbjct: 298 MKEMSRKGFHPDAFSFNTIMDALGKANKPDAAREVFARMVESGCKPDLISYNILIDSYAR 357
Query: 458 TAD 460
D
Sbjct: 358 FGD 360
Score = 142 bits (359), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 88/342 (25%), Positives = 160/342 (46%), Gaps = 6/342 (1%)
Query: 151 EAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMM 210
E + + M + G RP L ++KL + ++ + F E P F +
Sbjct: 15 ETLLKEMVAEG-RP--LRPNTLVKLITAYGRGNKSGDAFDLFNQAESFACSPTVHAFTKL 71
Query: 211 IYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSF---ETNYKEVSKIYDQMQRAGL 267
I + +G +E+A ++ + ++G Q YN L+ + +++ +M+ G
Sbjct: 72 IDILVNSGEFERAELVYKKLVQKGCQLDRFAYNVLIRYFGRSGQLDSAMEMFREMKIKGS 131
Query: 268 QPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQART 327
+PD +Y L+NA GKA R +EA + F+ ML+ G+ P YN+L+DAF G +D A
Sbjct: 132 EPDEYTYGFLVNALGKAGRVQEARSFFDAMLERGLTPNIPTYNLLMDAFRKVGQLDMALG 191
Query: 328 VFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYA 387
+F M+R P + +Y +L A +A + A K F ++ DG P+ TY TL+ G
Sbjct: 192 LFAEMKRRGFQPSVVTYNILLDALCSAGRVGAARKLFHKMTGDGCSPDSYTYSTLVNGLG 251
Query: 388 KVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQK 447
K +E+ +++ +M G+ + + +++ K + D KEM GF PD
Sbjct: 252 KSGRVEEAHKVFREMVDRGVAVDLVNYNSLLATLAKAGNMDRVWKLMKEMSRKGFHPDAF 311
Query: 448 AKNILLSLAKTADERNEANELLGNFNHPNNEPGINGLSISVD 489
+ N ++ A++ + A E+ +P + +I +D
Sbjct: 312 SFNTIMDALGKANKPDAAREVFARMVESGCKPDLISYNILID 353
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 77/260 (29%), Positives = 127/260 (48%), Gaps = 6/260 (2%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
L+ GK G +A KV M +G A +V++ +L+ + G + + M G
Sbjct: 246 LVNGLGKSGRVEEAHKVFREMVDRGVAVDLVNYNSLLATLAKAGNMDRVWKLMKEMSRKG 305
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
P A ++ I+ +ANK A EVF +++ S KPD ++++I Y + G
Sbjct: 306 FHPDAFSFNTIMDALGKANKPDAAREVFARMVE---SGCKPDLISYNILIDSYARFGDAA 362
Query: 222 KARKLFALMAERGVQQSTVTYNSLMSF---ETNYKEVSKIYDQMQRAGLQPDVVSYALLI 278
+AR++ M E G T TYNSL+ + + E + ++M+ AG +PDVV+Y L+
Sbjct: 363 QARQMLEEMVEAGFIPETKTYNSLIHWLATDGQVDEAFAVLEEMETAGCRPDVVTYNRLM 422
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCS 338
+ GK + A +F++M D GV P +Y + +D A +D+A +FK M+ C
Sbjct: 423 DMLGKRGENQRAARLFQQMKDKGVEPDTLSYAVRIDGLAFDDRLDEALVLFKDMKAVGCP 482
Query: 339 PDICSYTTMLSAYVNASDME 358
D Y ++ A A D E
Sbjct: 483 VDKAMYRILIRAAHRAGDTE 502
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 94/398 (23%), Positives = 168/398 (42%), Gaps = 40/398 (10%)
Query: 33 RLMNQIEEVGSAVAVLRSERTRGQPLPKDLVLGTLVRLKQLKKWNVVSEVLEWL--RIQS 90
R + ++ SA+ + R + +G P + G LV L K V E + ++
Sbjct: 108 RYFGRSGQLDSAMEMFREMKIKGSE-PDEYTYGFLV--NALGKAGRVQEARSFFDAMLER 164
Query: 91 WWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNA 150
N + +L+ A+ K G + A + + M ++G+ PSVV++ L++A GR A
Sbjct: 165 GLTPNIPTYNLLMDAFRKVGQLDMALGLFAEMKRRGFQPSVVTYNILLDALCSAGRVGAA 224
Query: 151 EAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDE--------------- 195
+F +M G P + TY ++ ++ + +EA +VF ++D
Sbjct: 225 RKLFHKMTGDGCSPDSYTYSTLVNGLGKSGRVEEAHKVFREMVDRGVAVDLVNYNSLLAT 284
Query: 196 -----------------EKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQS 238
+ PD F+ ++ KA + AR++FA M E G +
Sbjct: 285 LAKAGNMDRVWKLMKEMSRKGFHPDAFSFNTIMDALGKANKPDAAREVFARMVESGCKPD 344
Query: 239 TVTYNSLMSFETNYKEVSK---IYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFE 295
++YN L+ + + ++ + ++M AG P+ +Y LI+ + +EA AV E
Sbjct: 345 LISYNILIDSYARFGDAAQARQMLEEMVEAGFIPETKTYNSLIHWLATDGQVDEAFAVLE 404
Query: 296 EMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNAS 355
EM AG RP YN L+D G +A +F+ M+ PD SY +
Sbjct: 405 EMETAGCRPDVVTYNRLMDMLGKRGENQRAARLFQQMKDKGVEPDTLSYAVRIDGLAFDD 464
Query: 356 DMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLE 393
++ A F+ +K G + Y LI+ + + E
Sbjct: 465 RLDEALVLFKDMKAVGCPVDKAMYRILIRAAHRAGDTE 502
>gi|357118714|ref|XP_003561096.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At5g39710-like [Brachypodium distachyon]
Length = 718
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 112/391 (28%), Positives = 204/391 (52%), Gaps = 11/391 (2%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSF-MNKKGYAPSVVSHTALMEAYGRGGRYKNAEAI 153
N + +L+ A +G +A V+ M G AP+VV++ L+ A+ R G AE +
Sbjct: 153 NVYTYNILVRALCARGQREEALGVVGDDMRGAGCAPNVVTYNTLVAAFCRAGEVDAAERL 212
Query: 154 FRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDE-EKSPLKPDQKMFHMMIY 212
M+ G RPS +T+ ++ +A + ++A ++F DE + L PD ++ ++
Sbjct: 213 VGVMREGGVRPSLVTFNTVVNGLCKAGRMEDARKMF----DEMAREGLTPDGVSYNTLVS 268
Query: 213 MYKKAGGYEKARKLFALMAERGVQQSTVTYNSL---MSFETNYKEVSKIYDQMQRAGLQP 269
Y KAG +A +FA MA++GV VT+ SL M N + + QM+ GL+
Sbjct: 269 GYCKAGCLHEALAVFAEMAQKGVVPDVVTFTSLIHAMCRAGNLERAVALVGQMRERGLRM 328
Query: 270 DVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVF 329
+ ++ LI+ + + ++AL +EM + ++P+ YN+L++ + G +D+AR +
Sbjct: 329 NEFTFTALIDGFCRNGFLDDALLAMKEMRECRIQPSVVCYNVLINGYCKLGRMDEARELI 388
Query: 330 KCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKV 389
M PD+ +Y+T+LS Y D + A + R++ + G VP+ ITY +LI+G +
Sbjct: 389 HEMEAKGMKPDVVTYSTILSGYCKIGDTDSAFELNRKMLKKGVVPDAITYSSLIRGLCEE 448
Query: 390 NNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAK 449
L E+++KM G++P++ +TT++D + K + A+ + EM G PD
Sbjct: 449 RRLGDACELFEKMLQLGLQPDEFTYTTLIDGHCKEGNVQKALSLHDEMIKKGVLPDVVTY 508
Query: 450 NILL-SLAKTADERNEANELLGNFNHPNNEP 479
++L+ L+K+A + EA LL + + P
Sbjct: 509 SVLIDGLSKSARTK-EAQRLLFKLYYEDPVP 538
Score = 139 bits (349), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 78/263 (29%), Positives = 134/263 (50%), Gaps = 4/263 (1%)
Query: 223 ARKLFALMAERGVQQSTVTYN----SLMSFETNYKEVSKIYDQMQRAGLQPDVVSYALLI 278
AR+L A M GV + TYN +L + + + + D M+ AG P+VV+Y L+
Sbjct: 138 ARRLLASMLRDGVAPNVYTYNILVRALCARGQREEALGVVGDDMRGAGCAPNVVTYNTLV 197
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCS 338
A+ +A + A + M + GVRP+ +N +++ +G ++ AR +F M R+ +
Sbjct: 198 AAFCRAGEVDAAERLVGVMREGGVRPSLVTFNTVVNGLCKAGRMEDARKMFDEMAREGLT 257
Query: 339 PDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEI 398
PD SY T++S Y A + A F + Q G VP+V+T+ +LI + NLE+ + +
Sbjct: 258 PDGVSYNTLVSGYCKAGCLHEALAVFAEMAQKGVVPDVVTFTSLIHAMCRAGNLERAVAL 317
Query: 399 YDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKT 458
+MR G++ N+ FT ++D + +N D A++ KEM C P N+L++
Sbjct: 318 VGQMRERGLRMNEFTFTALIDGFCRNGFLDDALLAMKEMRECRIQPSVVCYNVLINGYCK 377
Query: 459 ADERNEANELLGNFNHPNNEPGI 481
+EA EL+ +P +
Sbjct: 378 LGRMDEARELIHEMEAKGMKPDV 400
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 84/365 (23%), Positives = 180/365 (49%), Gaps = 21/365 (5%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
L++ Y K G ++A V + M +KG P VV+ T+L+ A R G + A A+ +M+ G
Sbjct: 266 LVSGYCKAGCLHEALAVFAEMAQKGVVPDVVTFTSLIHAMCRAGNLERAVALVGQMRERG 325
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
R + T+ ++ F N F ++ + + + + ++P ++++I Y K G +
Sbjct: 326 LRMNEFTFTALIDGFCR-NGF--LDDALLAMKEMRECRIQPSVVCYNVLINGYCKLGRMD 382
Query: 222 KARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSKIYD---QMQRAGLQPDVVSYALLI 278
+AR+L M +G++ VTY++++S + ++ +M + G+ PD ++Y+ LI
Sbjct: 383 EARELIHEMEAKGMKPDVVTYSTILSGYCKIGDTDSAFELNRKMLKKGVVPDAITYSSLI 442
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCS 338
+ RR +A +FE+ML G++P Y L+D G V +A ++ M +
Sbjct: 443 RGLCEERRLGDACELFEKMLQLGLQPDEFTYTTLIDGHCKEGNVQKALSLHDEMIKKGVL 502
Query: 339 PDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITY---------------GTLI 383
PD+ +Y+ ++ ++ + A++ +L + VP+ I Y L+
Sbjct: 503 PDVVTYSVLIDGLSKSARTKEAQRLLFKLYYEDPVPDNIKYEALMHCCRTAEFKSVVALL 562
Query: 384 KGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFP 443
KG++ + + ++Y M K + ++++ ++ + + + A+ ++K++ CGF
Sbjct: 563 KGFSMKGLMNQADKVYQSMLDRHWKLDGSVYSVLIHGHCRGGNIMKALSFHKQLLRCGFS 622
Query: 444 PDQKA 448
P+ +
Sbjct: 623 PNSTS 627
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 86/379 (22%), Positives = 163/379 (43%), Gaps = 42/379 (11%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + + L+ A+ + G+ + AE+++ M + G PS+V+ ++ + GR ++A +F
Sbjct: 189 NVVTYNTLVAAFCRAGEVDAAERLVGVMREGGVRPSLVTFNTVVNGLCKAGRMEDARKMF 248
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
M G P ++Y ++ + +A EA VF + + + PD F +I+
Sbjct: 249 DEMAREGLTPDGVSYNTLVSGYCKAGCLHEALAVFAEM---AQKGVVPDVVTFTSLIHAM 305
Query: 215 KKAGGYEKARKLFALMAERG-----------------------------------VQQST 239
+AG E+A L M ERG +Q S
Sbjct: 306 CRAGNLERAVALVGQMRERGLRMNEFTFTALIDGFCRNGFLDDALLAMKEMRECRIQPSV 365
Query: 240 VTYNSLMSFETNYK---EVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEE 296
V YN L++ E ++ +M+ G++PDVV+Y+ +++ Y K + A + +
Sbjct: 366 VCYNVLINGYCKLGRMDEARELIHEMEAKGMKPDVVTYSTILSGYCKIGDTDSAFELNRK 425
Query: 297 MLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASD 356
ML GV P Y+ L+ + A +F+ M + PD +YTT++ + +
Sbjct: 426 MLKKGVVPDAITYSSLIRGLCEERRLGDACELFEKMLQLGLQPDEFTYTTLIDGHCKEGN 485
Query: 357 MEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTT 416
++ A + + G +P+V+TY LI G +K ++ + K+ P+ +
Sbjct: 486 VQKALSLHDEMIKKGVLPDVVTYSVLIDGLSKSARTKEAQRLLFKLYYEDPVPDNIKYEA 545
Query: 417 IMDAYGKNKDFDSAVVWYK 435
+M + +F S V K
Sbjct: 546 LMHCC-RTAEFKSVVALLK 563
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 77/310 (24%), Positives = 141/310 (45%), Gaps = 21/310 (6%)
Query: 94 FNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAI 153
NE F LI + + G + A + M + PSVV + L+ Y + GR A +
Sbjct: 328 MNEFTFTALIDGFCRNGFLDDALLAMKEMRECRIQPSVVCYNVLINGYCKLGRMDEAREL 387
Query: 154 FRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYM 213
M++ G +P +TY IL + + A E+ +L K + PD + +I
Sbjct: 388 IHEMEAKGMKPDVVTYSTILSGYCKIGDTDSAFELNRKML---KKGVVPDAITYSSLIRG 444
Query: 214 YKKAGGYEKARKLFALMAERGVQQSTVTYNSLM---SFETNYKEVSKIYDQMQRAGLQPD 270
+ A +LF M + G+Q TY +L+ E N ++ ++D+M + G+ PD
Sbjct: 445 LCEERRLGDACELFEKMLQLGLQPDEFTYTTLIDGHCKEGNVQKALSLHDEMIKKGVLPD 504
Query: 271 VVSYALLINAYGKARREEEALAV---------------FEEMLDAGVRPTHKAYNILLDA 315
VV+Y++LI+ K+ R +EA + +E ++ K+ LL
Sbjct: 505 VVTYSVLIDGLSKSARTKEAQRLLFKLYYEDPVPDNIKYEALMHCCRTAEFKSVVALLKG 564
Query: 316 FAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPN 375
F++ G+++QA V++ M D Y+ ++ + ++ A F ++L + GF PN
Sbjct: 565 FSMKGLMNQADKVYQSMLDRHWKLDGSVYSVLIHGHCRGGNIMKALSFHKQLLRCGFSPN 624
Query: 376 VITYGTLIKG 385
+ +L++G
Sbjct: 625 STSTISLVRG 634
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 44/205 (21%), Positives = 91/205 (44%), Gaps = 20/205 (9%)
Query: 58 LPKDLVLGTLVR-LKQLKKWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAE 116
+P + +L+R L + ++ E+ E + +Q +E + LI + K+G+ KA
Sbjct: 432 VPDAITYSSLIRGLCEERRLGDACELFEKM-LQLGLQPDEFTYTTLIDGHCKEGNVQKAL 490
Query: 117 KVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQ------ 170
+ M KKG P VV+++ L++ + R K A+ + ++ P P + Y+
Sbjct: 491 SLHDEMIKKGVLPDVVTYSVLIDGLSKSARTKEAQRLLFKLYYEDPVPDNIKYEALMHCC 550
Query: 171 ---------IILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
+LK F +A++V+ ++LD K D ++ ++I+ + + G
Sbjct: 551 RTAEFKSVVALLKGFSMKGLMNQADKVYQSMLDRH---WKLDGSVYSVLIHGHCRGGNIM 607
Query: 222 KARKLFALMAERGVQQSTVTYNSLM 246
KA + G ++ + SL+
Sbjct: 608 KALSFHKQLLRCGFSPNSTSTISLV 632
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 54/118 (45%), Gaps = 2/118 (1%)
Query: 338 SPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMME 397
+P + +Y +L A +AS + A + + +DG PNV TY L++ E+ +
Sbjct: 117 APSLLAYNAVLLALSDAS-LPSARRLLASMLRDGVAPNVYTYNILVRALCARGQREEALG 175
Query: 398 IY-DKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLS 454
+ D MR G PN + T++ A+ + + D+A M G P N +++
Sbjct: 176 VVGDDMRGAGCAPNVVTYNTLVAAFCRAGEVDAAERLVGVMREGGVRPSLVTFNTVVN 233
>gi|242036829|ref|XP_002465809.1| hypothetical protein SORBIDRAFT_01g046200 [Sorghum bicolor]
gi|241919663|gb|EER92807.1| hypothetical protein SORBIDRAFT_01g046200 [Sorghum bicolor]
Length = 649
Score = 176 bits (445), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 107/381 (28%), Positives = 190/381 (49%), Gaps = 6/381 (1%)
Query: 76 WNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHT 135
W ++E L + S + N +++ +Y K +F+KA+ V+S M K+ P VV+H
Sbjct: 137 WPHLAEEAYRLVLSSDSEVNAYTLNIMVHSYCKSLEFDKADTVISEMEKRCVFPDVVTHN 196
Query: 136 ALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDE 195
L++A R G A A+ M + G +P +T+ +LK + +F +A+EVF +
Sbjct: 197 VLIDARFRAGDVDAAIALVDSMANKGLKPGIVTFNSVLKGLCKHRRFDKAKEVFRAM--- 253
Query: 196 EKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMS-FETNYK- 253
++ + PD + F+++I + + G E+A K + M +RGV V+++ L+ F T K
Sbjct: 254 DQCSVAPDVRSFNILIGGFCRVGEVEEAMKFYKEMQQRGVTPDVVSFSCLIGLFSTRGKM 313
Query: 254 -EVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNIL 312
+ +M+ GL PD V Y ++I + +A EAL V +EM+ G P YN L
Sbjct: 314 DHAAAYLREMKGLGLVPDGVIYTMVIGGFCRAGSMSEALRVRDEMVGLGCLPDVVTYNTL 373
Query: 313 LDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGF 372
L+ + A + M+ +PD+C++TT++ Y + E A + F L
Sbjct: 374 LNGLCKQHRLLDAEELLNEMKERGVTPDLCTFTTLIHGYCRDGNFEKALQLFDTLLHQRL 433
Query: 373 VPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVV 432
P+V+ Y +LI G + +L K E++D M I PN ++ ++D++ + + A
Sbjct: 434 RPDVVAYNSLIDGMCRKGDLAKANELWDDMHAREIFPNHVTYSILIDSHCEKGQVEEAFG 493
Query: 433 WYKEMESCGFPPDQKAKNILL 453
+ EM S G P+ N ++
Sbjct: 494 FLDEMVSKGNLPNIMTYNSII 514
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 93/355 (26%), Positives = 178/355 (50%), Gaps = 8/355 (2%)
Query: 97 MDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRR 156
+ F LI + +G + A L M G P V +T ++ + R G A +
Sbjct: 298 VSFSCLIGLFSTRGKMDHAAAYLREMKGLGLVPDGVIYTMVIGGFCRAGSMSEALRVRDE 357
Query: 157 MQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKS-PLKPDQKMFHMMIYMYK 215
M G P +TY +L + ++ +AEE LL+E K + PD F +I+ Y
Sbjct: 358 MVGLGCLPDVVTYNTLLNGLCKQHRLLDAEE----LLNEMKERGVTPDLCTFTTLIHGYC 413
Query: 216 KAGGYEKARKLFALMAERGVQQSTVTYNSL---MSFETNYKEVSKIYDQMQRAGLQPDVV 272
+ G +EKA +LF + + ++ V YNSL M + + + ++++D M + P+ V
Sbjct: 414 RDGNFEKALQLFDTLLHQRLRPDVVAYNSLIDGMCRKGDLAKANELWDDMHAREIFPNHV 473
Query: 273 SYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCM 332
+Y++LI+++ + + EEA +EM+ G P YN ++ + SG V + + + M
Sbjct: 474 TYSILIDSHCEKGQVEEAFGFLDEMVSKGNLPNIMTYNSIIKGYCRSGNVKKGQQFLQKM 533
Query: 333 RRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNL 392
+D PD+ ++ T++ Y+ +M GA F ++++ P+ +TY +I G+++ N+
Sbjct: 534 MQDNILPDLITFNTLIHGYIKEENMHGAFNVFNIMEKEMVQPDAVTYNMIINGFSEQGNM 593
Query: 393 EKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQK 447
E+ ++ KM +GI+P++ + ++++ + + A + EM GF PD K
Sbjct: 594 EEAGRVFKKMGASGIEPDRYTYMSLINGHVTAGNSKEAFQLHDEMMHRGFAPDDK 648
Score = 148 bits (373), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 96/386 (24%), Positives = 184/386 (47%), Gaps = 10/386 (2%)
Query: 99 FLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQ 158
F +LI + + G+ +A K M ++G P VVS + L+ + G+ +A A R M+
Sbjct: 265 FNILIGGFCRVGEVEEAMKFYKEMQQRGVTPDVVSFSCLIGLFSTRGKMDHAAAYLREMK 324
Query: 159 SSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLK--PDQKMFHMMIYMYKK 216
G P + Y +++ F A EA V +E L PD ++ ++ K
Sbjct: 325 GLGLVPDGVIYTMVIGGFCRAGSMSEALRV-----RDEMVGLGCLPDVVTYNTLLNGLCK 379
Query: 217 AGGYEKARKLFALMAERGVQQSTVTYNSLM---SFETNYKEVSKIYDQMQRAGLQPDVVS 273
A +L M ERGV T+ +L+ + N+++ +++D + L+PDVV+
Sbjct: 380 QHRLLDAEELLNEMKERGVTPDLCTFTTLIHGYCRDGNFEKALQLFDTLLHQRLRPDVVA 439
Query: 274 YALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMR 333
Y LI+ + +A ++++M + P H Y+IL+D+ G V++A M
Sbjct: 440 YNSLIDGMCRKGDLAKANELWDDMHAREIFPNHVTYSILIDSHCEKGQVEEAFGFLDEMV 499
Query: 334 RDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLE 393
P+I +Y +++ Y + +++ ++F +++ QD +P++IT+ TLI GY K N+
Sbjct: 500 SKGNLPNIMTYNSIIKGYCRSGNVKKGQQFLQKMMQDNILPDLITFNTLIHGYIKEENMH 559
Query: 394 KMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILL 453
+++ M ++P+ + I++ + + + + A +K+M + G PD+ L+
Sbjct: 560 GAFNVFNIMEKEMVQPDAVTYNMIINGFSEQGNMEEAGRVFKKMGASGIEPDRYTYMSLI 619
Query: 454 SLAKTADERNEANELLGNFNHPNNEP 479
+ TA EA +L H P
Sbjct: 620 NGHVTAGNSKEAFQLHDEMMHRGFAP 645
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 95/384 (24%), Positives = 178/384 (46%), Gaps = 6/384 (1%)
Query: 99 FLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQ 158
F ++ K F+KA++V M++ AP V S L+ + R G + A ++ MQ
Sbjct: 230 FNSVLKGLCKHRRFDKAKEVFRAMDQCSVAPDVRSFNILIGGFCRVGEVEEAMKFYKEMQ 289
Query: 159 SSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAG 218
G P +++ ++ LF K A L + + L PD ++ M+I + +AG
Sbjct: 290 QRGVTPDVVSFSCLIGLFSTRGKMDHAAAY---LREMKGLGLVPDGVIYTMVIGGFCRAG 346
Query: 219 GYEKARKLFALMAERGVQQSTVTYNSLMSF---ETNYKEVSKIYDQMQRAGLQPDVVSYA 275
+A ++ M G VTYN+L++ + + ++ ++M+ G+ PD+ ++
Sbjct: 347 SMSEALRVRDEMVGLGCLPDVVTYNTLLNGLCKQHRLLDAEELLNEMKERGVTPDLCTFT 406
Query: 276 LLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRD 335
LI+ Y + E+AL +F+ +L +RP AYN L+D G + +A ++ M
Sbjct: 407 TLIHGYCRDGNFEKALQLFDTLLHQRLRPDVVAYNSLIDGMCRKGDLAKANELWDDMHAR 466
Query: 336 RCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKM 395
P+ +Y+ ++ ++ +E A F + G +PN++TY ++IKGY + N++K
Sbjct: 467 EIFPNHVTYSILIDSHCEKGQVEEAFGFLDEMVSKGNLPNIMTYNSIIKGYCRSGNVKKG 526
Query: 396 MEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSL 455
+ KM + I P+ F T++ Y K ++ A + ME PD N++++
Sbjct: 527 QQFLQKMMQDNILPDLITFNTLIHGYIKEENMHGAFNVFNIMEKEMVQPDAVTYNMIING 586
Query: 456 AKTADERNEANELLGNFNHPNNEP 479
EA + EP
Sbjct: 587 FSEQGNMEEAGRVFKKMGASGIEP 610
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 91/352 (25%), Positives = 167/352 (47%), Gaps = 6/352 (1%)
Query: 143 RGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKP 202
R G AE +R + SS +A T I++ + ++ +F +A+ V + EK + P
Sbjct: 134 RAGWPHLAEEAYRLVLSSDSEVNAYTLNIMVHSYCKSLEFDKADTVISEM---EKRCVFP 190
Query: 203 DQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSK---IY 259
D +++I +AG + A L MA +G++ VT+NS++ ++ K ++
Sbjct: 191 DVVTHNVLIDARFRAGDVDAAIALVDSMANKGLKPGIVTFNSVLKGLCKHRRFDKAKEVF 250
Query: 260 DQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAIS 319
M + + PDV S+ +LI + + EEA+ ++EM GV P +++ L+ F+
Sbjct: 251 RAMDQCSVAPDVRSFNILIGGFCRVGEVEEAMKFYKEMQQRGVTPDVVSFSCLIGLFSTR 310
Query: 320 GMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITY 379
G +D A + M+ PD YT ++ + A M A + + G +P+V+TY
Sbjct: 311 GKMDHAAAYLREMKGLGLVPDGVIYTMVIGGFCRAGSMSEALRVRDEMVGLGCLPDVVTY 370
Query: 380 GTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMES 439
TL+ G K + L E+ ++M+ G+ P+ FTT++ Y ++ +F+ A+ + +
Sbjct: 371 NTLLNGLCKQHRLLDAEELLNEMKERGVTPDLCTFTTLIHGYCRDGNFEKALQLFDTLLH 430
Query: 440 CGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGINGLSISVDEE 491
PD A N L+ + +ANEL + + P SI +D
Sbjct: 431 QRLRPDVVAYNSLIDGMCRKGDLAKANELWDDMHAREIFPNHVTYSILIDSH 482
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/179 (24%), Positives = 90/179 (50%), Gaps = 6/179 (3%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + + +LI ++ ++G +A L M KG P+++++ ++++ Y R G K +
Sbjct: 471 NHVTYSILIDSHCEKGQVEEAFGFLDEMVSKGNLPNIMTYNSIIKGYCRSGNVKKGQQFL 530
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
++M P +T+ ++ +++ A VF + EK ++PD ++M+I +
Sbjct: 531 QKMMQDNILPDLITFNTLIHGYIKEENMHGAFNVFNIM---EKEMVQPDAVTYNMIINGF 587
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFET---NYKEVSKIYDQMQRAGLQPD 270
+ G E+A ++F M G++ TY SL++ N KE +++D+M G PD
Sbjct: 588 SEQGNMEEAGRVFKKMGASGIEPDRYTYMSLINGHVTAGNSKEAFQLHDEMMHRGFAPD 646
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 91/198 (45%), Gaps = 2/198 (1%)
Query: 268 QPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQART 327
QP V + LLI Y ++R+ EA F +LD V A N LL A + +G A
Sbjct: 86 QPQV--FDLLIRTYTQSRKPREAFEAFRLLLDHRVPVPASASNALLAALSRAGWPHLAEE 143
Query: 328 VFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYA 387
++ + + + M+ +Y + + + A+ +++ P+V+T+ LI
Sbjct: 144 AYRLVLSSDSEVNAYTLNIMVHSYCKSLEFDKADTVISEMEKRCVFPDVVTHNVLIDARF 203
Query: 388 KVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQK 447
+ +++ + + D M G+KP F +++ K++ FD A ++ M+ C PD +
Sbjct: 204 RAGDVDAAIALVDSMANKGLKPGIVTFNSVLKGLCKHRRFDKAKEVFRAMDQCSVAPDVR 263
Query: 448 AKNILLSLAKTADERNEA 465
+ NIL+ E EA
Sbjct: 264 SFNILIGGFCRVGEVEEA 281
>gi|293335157|ref|NP_001169529.1| uncharacterized protein LOC100383403 [Zea mays]
gi|224029903|gb|ACN34027.1| unknown [Zea mays]
gi|414887232|tpg|DAA63246.1| TPA: hypothetical protein ZEAMMB73_160132 [Zea mays]
Length = 819
Score = 175 bits (444), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 114/461 (24%), Positives = 215/461 (46%), Gaps = 42/461 (9%)
Query: 18 VFKDAADEAGKKNWRRLMNQIEEVGS---AVAVLRSERTRGQPLPKDLVLGTLVRLK--- 71
V A ++N+ L+ +I GS AV V R + + ++ + G ++RL
Sbjct: 107 VLNCWAGRFARRNFPLLIREIAISGSLKHAVHVFRWMKNQENYCARNDIYGMMIRLHARH 166
Query: 72 -----------QLKKWNVV-------SEVLEWLRIQSW-WDFNEMDFLM----------- 101
++++W S + R W W N MD +
Sbjct: 167 NKVDQARGLFFEMQEWRCKPNTDTYNSLIHAHARAGQWCWAINIMDDMQRAAIPPSRTTY 226
Query: 102 --LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQS 159
+I A G G++ KA ++ M + G P +++H ++ A+ G +Y A A F M+S
Sbjct: 227 NNVINACGAAGNWKKALELCKKMTENGVGPDLITHNIVLSAFKNGAQYSKAIAYFEIMKS 286
Query: 160 SGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGG 219
S P T I++ V+ + EA E+F ++ E ++ PD + ++Y Y G
Sbjct: 287 SKVAPDTCTMNIVIHCLVKIGLYGEAIELFNSM-RERRTTCHPDVVTYTSIMYSYSVCGQ 345
Query: 220 YEKARKLFALMAERGVQQSTVTYNSLMSFETNY---KEVSKIYDQMQRAGLQPDVVSYAL 276
E + +F +M GV+ + V+YN+L+ ++ E + + +++ GL+PD+VSY
Sbjct: 346 AENCKAVFDIMVAEGVRPNIVSYNALLGAYASHGMHTEALETFKLLKQNGLRPDIVSYTS 405
Query: 277 LINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDR 336
L+NAYG++ + E+A VF EM +P +YN L+DA+ +GM+ +A ++ M +D
Sbjct: 406 LLNAYGRSAQPEKAREVFNEMRKNACKPNKVSYNALIDAYGSAGMLKEAISLLHEMEQDG 465
Query: 337 CSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMM 396
PD+ S +T+L+A + + K G N + Y + I Y + + +K +
Sbjct: 466 IQPDVISISTLLTACGRCKQLTKIDIILAAAKSRGIQLNTVAYNSGIGSYLSLGDYKKAL 525
Query: 397 EIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEM 437
+Y MR +KP+ + ++ K + ++ ++++M
Sbjct: 526 VLYTSMRAGNVKPDAVTYNILISGSCKLGRYVESLKFFEDM 566
Score = 154 bits (390), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 90/340 (26%), Positives = 176/340 (51%), Gaps = 8/340 (2%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + + L+ AY G +A + + + G P +VS+T+L+ AYGR + + A +F
Sbjct: 364 NIVSYNALLGAYASHGMHTEALETFKLLKQNGLRPDIVSYTSLLNAYGRSAQPEKAREVF 423
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDE-EKSPLKPDQKMFHMMIYM 213
M+ + +P+ ++Y ++ + A KEA ++LL E E+ ++PD ++
Sbjct: 424 NEMRKNACKPNKVSYNALIDAYGSAGMLKEA----ISLLHEMEQDGIQPDVISISTLLTA 479
Query: 214 YKKAGGYEKARKLFALMAERGVQQSTVTYNS-LMSFET--NYKEVSKIYDQMQRAGLQPD 270
+ K + A RG+Q +TV YNS + S+ + +YK+ +Y M+ ++PD
Sbjct: 480 CGRCKQLTKIDIILAAAKSRGIQLNTVAYNSGIGSYLSLGDYKKALVLYTSMRAGNVKPD 539
Query: 271 VVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFK 330
V+Y +LI+ K R E+L FE+MLD + T + Y+ ++ ++ G + +A + F
Sbjct: 540 AVTYNILISGSCKLGRYVESLKFFEDMLDLNIHLTKEVYSSVICSYVKQGKLTEAASTFN 599
Query: 331 CMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVN 390
M+ C PD+ +YTT++ AY + A F+ ++ +G P+ I +L++ K
Sbjct: 600 SMKETGCFPDVLTYTTLIKAYSDDGSWRRAWDLFKEMENNGTQPDAIVCSSLMEALNKGG 659
Query: 391 NLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSA 430
E+++++ + M+ I+ NQ + I+ + +D+ +A
Sbjct: 660 QPERVLQLIEFMKQKKIQLNQKAYFEIISSCTMLRDWKTA 699
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 82/355 (23%), Positives = 173/355 (48%), Gaps = 9/355 (2%)
Query: 137 LMEAYGRGGRYKNAEAIFRRMQSSGPRPSAL-TYQIILKLFVEANKFKEAEEVFMTLLDE 195
L+ G K+A +FR M++ + Y ++++L NK +A +F +
Sbjct: 123 LIREIAISGSLKHAVHVFRWMKNQENYCARNDIYGMMIRLHARHNKVDQARGLFFEM--- 179
Query: 196 EKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSF---ETNY 252
++ KP+ ++ +I+ + +AG + A + M + S TYN++++ N+
Sbjct: 180 QEWRCKPNTDTYNSLIHAHARAGQWCWAINIMDDMQRAAIPPSRTTYNNVINACGAAGNW 239
Query: 253 KEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNIL 312
K+ ++ +M G+ PD++++ ++++A+ + +A+A FE M + V P NI+
Sbjct: 240 KKALELCKKMTENGVGPDLITHNIVLSAFKNGAQYSKAIAYFEIMKSSKVAPDTCTMNIV 299
Query: 313 LDAFAISGMVDQARTVFKCMR--RDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQD 370
+ G+ +A +F MR R C PD+ +YT+++ +Y E + F + +
Sbjct: 300 IHCLVKIGLYGEAIELFNSMRERRTTCHPDVVTYTSIMYSYSVCGQAENCKAVFDIMVAE 359
Query: 371 GFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSA 430
G PN+++Y L+ YA + +E + ++ NG++P+ +T++++AYG++ + A
Sbjct: 360 GVRPNIVSYNALLGAYASHGMHTEALETFKLLKQNGLRPDIVSYTSLLNAYGRSAQPEKA 419
Query: 431 VVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGINGLS 485
+ EM P++ + N L+ +A EA LL +P + +S
Sbjct: 420 REVFNEMRKNACKPNKVSYNALIDAYGSAGMLKEAISLLHEMEQDGIQPDVISIS 474
Score = 65.1 bits (157), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 81/385 (21%), Positives = 147/385 (38%), Gaps = 54/385 (14%)
Query: 11 QKRRKVEVFKDAADEAGKKNWRRLMNQIEEVGSA------VAVLRSERTRG-QP--LPKD 61
Q + EVF + A K N I+ GSA +++L G QP +
Sbjct: 415 QPEKAREVFNEMRKNACKPNKVSYNALIDAYGSAGMLKEAISLLHEMEQDGIQPDVISIS 474
Query: 62 LVLGTLVRLKQLKKWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSF 121
+L R KQL K +++ + IQ N + + I +Y GD+ KA + +
Sbjct: 475 TLLTACGRCKQLTKIDIILAAAKSRGIQ----LNTVAYNSGIGSYLSLGDYKKALVLYTS 530
Query: 122 MNKKGYAPSVVSHTALMEAYGRGGRY---------------------------------- 147
M P V++ L+ + GRY
Sbjct: 531 MRAGNVKPDAVTYNILISGSCKLGRYVESLKFFEDMLDLNIHLTKEVYSSVICSYVKQGK 590
Query: 148 -KNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKM 206
A + F M+ +G P LTY ++K + + ++ A ++F + E + +PD +
Sbjct: 591 LTEAASTFNSMKETGCFPDVLTYTTLIKAYSDDGSWRRAWDLFKEM---ENNGTQPDAIV 647
Query: 207 FHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFET---NYKEVSKIYDQMQ 263
++ K G E+ +L M ++ +Q + Y ++S T ++K S+I + +
Sbjct: 648 CSSLMEALNKGGQPERVLQLIEFMKQKKIQLNQKAYFEIISSCTMLRDWKTASQIIEHLD 707
Query: 264 RAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVD 323
+ + ++N GK R E + +F +M+ + Y ILL I G
Sbjct: 708 SSLSSISFGTLNHILNFLGKCGRTESMMKLFYKMVTSCSTVGLSTYTILLRNLLIVGKWR 767
Query: 324 QARTVFKCMRRDRCSPDICSYTTML 348
+ V + M P + Y ++L
Sbjct: 768 KYVEVLQWMEDAGVCPTLYMYQSVL 792
>gi|297827821|ref|XP_002881793.1| EMB2654 [Arabidopsis lyrata subsp. lyrata]
gi|297327632|gb|EFH58052.1| EMB2654 [Arabidopsis lyrata subsp. lyrata]
Length = 822
Score = 175 bits (443), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 107/412 (25%), Positives = 190/412 (46%), Gaps = 18/412 (4%)
Query: 87 RIQSW-WDFNEMDFLM-------------LITAYGKQGDFNKAEKVLSFMNKKGYAPSVV 132
R W W N MD ++ LI A G G++ +A +V M G P +V
Sbjct: 190 RAGQWRWAMNLMDDMLRAAIAPSRSTYNNLINACGSSGNWRQALEVCKKMTDNGVGPDLV 249
Query: 133 SHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTL 192
+H ++ AY G +Y A + F M+ + RP T+ II+ + + +A +VF ++
Sbjct: 250 THNIVLSAYKSGRQYSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDVFNSM 309
Query: 193 LDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLM---SFE 249
D+ ++ +PD F ++++Y G E R +F M G++ + V+YN+LM +
Sbjct: 310 RDK-RAECRPDVVTFTSIMHLYSVRGEIENCRAVFEAMLAEGLKPNIVSYNALMGAYAVH 368
Query: 250 TNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAY 309
+ ++ ++R G+ PDVVSY L+N+YG++R+ +A VF M +P Y
Sbjct: 369 GMSENALSVFGDIKRNGIVPDVVSYTSLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTY 428
Query: 310 NILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQ 369
N L+DA+ +G + +A +F+ M +D P++ S T+L+A + E +
Sbjct: 429 NALIDAYGSNGFLAEAVEIFRQMEQDGTKPNVVSVCTLLAACSRSKKKVNVETVLSAAQS 488
Query: 370 DGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDS 429
G N Y + I Y LEK + +Y MR +K + FT ++ + +
Sbjct: 489 RGINLNTAAYNSAIGSYINAAELEKAIALYQTMRKKKVKADSVTFTILISGSCRMSKYPE 548
Query: 430 AVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGI 481
A+ + KEME P ++ + +L + EA + +P +
Sbjct: 549 AISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCKPDV 600
Score = 152 bits (383), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 96/349 (27%), Positives = 179/349 (51%), Gaps = 8/349 (2%)
Query: 82 VLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAY 141
V +W++ Q + + M+I + + ++A + M K P ++ AL+ A+
Sbjct: 129 VFKWMKSQKNYCARNDIYNMMIRLHARHNWVDQARGLFFEMQKWSCKPDAETYDALINAH 188
Query: 142 GRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLK 201
GR G+++ A + M + PS TY ++ + +++A EV + D + +
Sbjct: 189 GRAGQWRWAMNLMDDMLRAAIAPSRSTYNNLINACGSSGNWRQALEVCKKMTD---NGVG 245
Query: 202 PDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSK---I 258
PD ++++ YK Y KA F LM V+ T T+N ++ + + S+ +
Sbjct: 246 PDLVTHNIVLSAYKSGRQYSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDV 305
Query: 259 YDQM--QRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAF 316
++ M +RA +PDVV++ +++ Y E AVFE ML G++P +YN L+ A+
Sbjct: 306 FNSMRDKRAECRPDVVTFTSIMHLYSVRGEIENCRAVFEAMLAEGLKPNIVSYNALMGAY 365
Query: 317 AISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNV 376
A+ GM + A +VF ++R+ PD+ SYT++L++Y + A++ F ++++ PNV
Sbjct: 366 AVHGMSENALSVFGDIKRNGIVPDVVSYTSLLNSYGRSRQPGKAKEVFLMMRKERRKPNV 425
Query: 377 ITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNK 425
+TY LI Y L + +EI+ +M +G KPN T++ A ++K
Sbjct: 426 VTYNALIDAYGSNGFLAEAVEIFRQMEQDGTKPNVVSVCTLLAACSRSK 474
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 86/341 (25%), Positives = 163/341 (47%), Gaps = 8/341 (2%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + + L+ AY G A V + + G P VVS+T+L+ +YGR + A+ +F
Sbjct: 354 NIVSYNALMGAYAVHGMSENALSVFGDIKRNGIVPDVVSYTSLLNSYGRSRQPGKAKEVF 413
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
M+ +P+ +TY ++ + EA E+F + E+ KP+ ++
Sbjct: 414 LMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQM---EQDGTKPNVVSVCTLLAAC 470
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSK---IYDQMQRAGLQPDV 271
++ + + RG+ +T YNS + N E+ K +Y M++ ++ D
Sbjct: 471 SRSKKKVNVETVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQTMRKKKVKADS 530
Query: 272 VSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKC 331
V++ +LI+ + + EA++ +EM D + T + Y+ +L A++ G V +A ++F
Sbjct: 531 VTFTILISGSCRMSKYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQ 590
Query: 332 MRRDRCSPDICSYTTMLSAYVNASDMEG-AEKFFRRLKQDGFVPNVITYGTLIKGYAKVN 390
M+ C PD+ +YT+ML AY NAS+ G A + F ++ +G P+ I L++ + K
Sbjct: 591 MKMAGCKPDVIAYTSMLHAY-NASEKWGKACELFLEMEANGIEPDSIACSALMRAFNKGG 649
Query: 391 NLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAV 431
+ + D MR + +F I A +++ A+
Sbjct: 650 QPSNVFVLMDLMREKEVPFTGAVFFEIFSACNTLQEWKRAI 690
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 88/396 (22%), Positives = 155/396 (39%), Gaps = 76/396 (19%)
Query: 97 MDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRR 156
+ + L+ +YG+ KA++V M K+ P+VV++ AL++AYG G A IFR+
Sbjct: 391 VSYTSLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQ 450
Query: 157 MQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKK 216
M+ G +P+ ++ + L ++ K+ V L + + + ++ I Y
Sbjct: 451 MEQDGTKPNVVS---VCTLLAACSRSKKKVNVETVLSAAQSRGINLNTAAYNSAIGSYIN 507
Query: 217 AGGYEKARKLFALMAERGVQQSTVTYNSLMSFET-------------------------- 250
A EKA L+ M ++ V+ +VT+ L+S
Sbjct: 508 AAELEKAIALYQTMRKKKVKADSVTFTILISGSCRMSKYPEAISYLKEMEDLSIPLTKEV 567
Query: 251 ------------NYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEML 298
E I++QM+ AG +PDV++Y +++AY + + +A +F EM
Sbjct: 568 YSSVLCAYSKQGQVTEAESIFNQMKMAGCKPDVIAYTSMLHAYNASEKWGKACELFLEME 627
Query: 299 DAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRR--------------DRC------- 337
G+ P A + L+ AF G + MR C
Sbjct: 628 ANGIEPDSIACSALMRAFNKGGQPSNVFVLMDLMREKEVPFTGAVFFEIFSACNTLQEWK 687
Query: 338 --------------SPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLI 383
S I ML + + +E K F ++ G N TY L+
Sbjct: 688 RAIDLIQMMDPYLPSLSIGLTNQMLYLFGKSGKVEAMMKLFYKIIASGVEINFKTYAILL 747
Query: 384 KGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMD 419
+ V N K +E+ + M GI+P+ ++ I+
Sbjct: 748 EHLLAVGNWRKYIEVLEWMSDAGIQPSNQMYRDIIS 783
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 80/366 (21%), Positives = 155/366 (42%), Gaps = 45/366 (12%)
Query: 169 YQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFA 228
Y ++++L N +A +F + +K KPD + + +I + +AG + A L
Sbjct: 146 YNMMIRLHARHNWVDQARGLFFEM---QKWSCKPDAETYDALINAHGRAGQWRWAMNLMD 202
Query: 229 LMAERGVQQSTVTYNSLMSF---ETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKAR 285
M + S TYN+L++ N+++ ++ +M G+ PD+V++ ++++AY R
Sbjct: 203 DMLRAAIAPSRSTYNNLINACGSSGNWRQALEVCKKMTDNGVGPDLVTHNIVLSAYKSGR 262
Query: 286 REEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMR--RDRCSPDICS 343
+ +AL+ FE M A VRP +NI++ + G QA VF MR R C PD
Sbjct: 263 QYSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDVFNSMRDKRAECRPD--- 319
Query: 344 YTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMR 403
V+T+ +++ Y+ +E +++ M
Sbjct: 320 --------------------------------VVTFTSIMHLYSVRGEIENCRAVFEAML 347
Query: 404 VNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERN 463
G+KPN + +M AY + ++A+ + +++ G PD + LL+ + +
Sbjct: 348 AEGLKPNIVSYNALMGAYAVHGMSENALSVFGDIKRNGIVPDVVSYTSLLNSYGRSRQPG 407
Query: 464 EANELLGNFNHPNNEPGINGLSISVDEEDDDDDDDEDDDDNIYHDGDGDGDGDDNEDDAE 523
+A E+ +P + + +D + E + I+ + DG +
Sbjct: 408 KAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVE--IFRQMEQDGTKPNVVSVCT 465
Query: 524 ETIACS 529
ACS
Sbjct: 466 LLAACS 471
>gi|357473123|ref|XP_003606846.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355507901|gb|AES89043.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 624
Score = 175 bits (443), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 111/426 (26%), Positives = 202/426 (47%), Gaps = 16/426 (3%)
Query: 90 SWWDFNEM----------DFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALME 139
+W+ + EM F ++I ++G + KA+ + M G P+VV++ ++
Sbjct: 201 AWFVYEEMVKMNIKSSIVTFNIMINILCREGKWKKAKDFIGHMEVYGVKPNVVTYNTVIN 260
Query: 140 AYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSP 199
Y G+++ A IF+ M+ +P TY + + + +EA V LL+ S
Sbjct: 261 GYCLRGKFEAASKIFKTMKDKNLKPDCYTYNSFISRLCKERRIEEASGVLCKLLE---SG 317
Query: 200 LKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMS---FETNYKEVS 256
L P+ ++ +I G +KA M RG+ S TYN L+ E +E
Sbjct: 318 LVPNAVTYNALIDGCCNKGDLDKAFAYRDEMMNRGIVASVFTYNLLIHALFLEKRIEEAE 377
Query: 257 KIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAF 316
+ +M+ G++PDVV+Y + IN Y + ++AL++F+EM++ +RPT + Y L+D F
Sbjct: 378 DMIKEMREKGVEPDVVTYNIQINGYCRCGNAKKALSLFDEMVEKNIRPTVETYTSLIDVF 437
Query: 317 AISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNV 376
+ +A FK ++ PDI + ++ + +++ A + + + VP+
Sbjct: 438 GKRNRMSEAEEKFKKSIKEGMLPDIIMFNALIDGHCVNGNIDRAFQLLKEMDNAKVVPDE 497
Query: 377 ITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKE 436
+T+ TL++GY + +E+ ++ D+M+ GIKP+ + T++ Y K D A+ + E
Sbjct: 498 VTFNTLMQGYCRERKVEEAKKLLDEMKERGIKPDHISYNTLISGYSKRGDMKDALEVFDE 557
Query: 437 MESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGINGLSISVDEEDDDDD 496
M S GF P N L+ E + A ELL P + ++ +DD
Sbjct: 558 MLSLGFDPTLLTYNALIQGYSKIGEADHAEELLREMQSKGITPDDSTYLYVIEAMKTNDD 617
Query: 497 DDEDDD 502
E+DD
Sbjct: 618 LVENDD 623
>gi|357111163|ref|XP_003557384.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g41720-like [Brachypodium distachyon]
Length = 821
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 118/518 (22%), Positives = 232/518 (44%), Gaps = 42/518 (8%)
Query: 18 VFKDAADEAGKKNWRRLMNQIEEVGS---AVAVLRSERTRGQPLPKDLVLGTLVRLK--- 71
V A ++N+ L+ +I GS AV V R + + ++ + G ++RL
Sbjct: 109 VLNCWAGRFARRNFPLLIREITFAGSLQHAVHVFRWMKNQENYCARNDIYGMMIRLHARH 168
Query: 72 -----------QLKKWNVV-------SEVLEWLRIQSW-WDFNEMDFLM----------- 101
++++W S + R W W N MD ++
Sbjct: 169 SQIDQARGLFFEMQEWRCKPDADIYNSLIHAHARAGQWRWAINIMDDMLRAAIPPSRTTY 228
Query: 102 --LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQS 159
+I A G G++ KA ++ M + G P +V+H ++ A+ G +Y A A F M+
Sbjct: 229 NNVINACGAAGNWKKALELCKKMTRNGVGPDLVTHNIVLSAFKNGSQYSKAIAYFEMMKG 288
Query: 160 SGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGG 219
+ P T I++ V+ ++ EA E+ ++ E+++ PD + +++ Y G
Sbjct: 289 ANIAPDTFTLNIVIHCLVKDGQYGEAIELLNSM-REKRTQCPPDVVTYTSIMHSYYVCGK 347
Query: 220 YEKARKLFALMAERGVQQSTVTYNSLMSFETN---YKEVSKIYDQMQRAGLQPDVVSYAL 276
E + +F +M GV+ + V+YN+L+ + + + I+ +++ GL+PDVVSY
Sbjct: 348 VEDCKAVFDMMVAEGVKPNIVSYNALLGAYASRGMHADALGIFKLLKQNGLRPDVVSYTT 407
Query: 277 LINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDR 336
L+NAYG++ + E+A F+EM RP +YN L+DA+ +GM +A ++ M +D
Sbjct: 408 LLNAYGRSGQPEKAREAFKEMRKNSCRPNIVSYNALIDAYGSAGMFKEAISLLHEMEKDG 467
Query: 337 CSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMM 396
PD+ S +T+L+A + + K G N++ Y + I Y + K +
Sbjct: 468 IPPDVVSISTLLTACGRCRQITKIDTILEAAKSRGIKLNIVCYNSGIGSYLNFGDYGKAL 527
Query: 397 EIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLA 456
E+Y M + + P+ + ++ K + ++ ++++M P ++ + L+
Sbjct: 528 ELYAVMMASNVNPDAVTYNILISGLCKVGKYAESLKFFEDMVDLRIPLTKEVYSSLICSY 587
Query: 457 KTADERNEANELLGNFNHPNNEPGINGLSISVDEEDDD 494
+ EA + P + + ++ +DD
Sbjct: 588 VKQGKLTEAESTFSSMKESGCLPDVLTYTAMIEAYNDD 625
Score = 148 bits (374), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 99/400 (24%), Positives = 191/400 (47%), Gaps = 17/400 (4%)
Query: 40 EVGSAVAVLRSERTRGQPLPKDLVLGTLVRLKQLKKWNVVSEVLEW-----LRIQSWWDF 94
+ G A+ +L S R + P D+V T + + + V +V + + +
Sbjct: 310 QYGEAIELLNSMREKRTQCPPDVVTYTSI----MHSYYVCGKVEDCKAVFDMMVAEGVKP 365
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + + L+ AY +G A + + + G P VVS+T L+ AYGR G+ + A F
Sbjct: 366 NIVSYNALLGAYASRGMHADALGIFKLLKQNGLRPDVVSYTTLLNAYGRSGQPEKAREAF 425
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDE-EKSPLKPDQKMFHMMIYM 213
+ M+ + RP+ ++Y ++ + A FKEA ++LL E EK + PD ++
Sbjct: 426 KEMRKNSCRPNIVSYNALIDAYGSAGMFKEA----ISLLHEMEKDGIPPDVVSISTLLTA 481
Query: 214 YKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSK---IYDQMQRAGLQPD 270
+ K + RG++ + V YNS + N+ + K +Y M + + PD
Sbjct: 482 CGRCRQITKIDTILEAAKSRGIKLNIVCYNSGIGSYLNFGDYGKALELYAVMMASNVNPD 541
Query: 271 VVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFK 330
V+Y +LI+ K + E+L FE+M+D + T + Y+ L+ ++ G + +A + F
Sbjct: 542 AVTYNILISGLCKVGKYAESLKFFEDMVDLRIPLTKEVYSSLICSYVKQGKLTEAESTFS 601
Query: 331 CMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVN 390
M+ C PD+ +YT M+ AY + A F+ ++ + P+ I +L++ + +
Sbjct: 602 SMKESGCLPDVLTYTAMIEAYNDDGSWRNAWDLFKEMEGNTVQPDAIICSSLMEALNRGS 661
Query: 391 NLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSA 430
E+++++ + M+ I NQ + I+ + +D+ +A
Sbjct: 662 QHERVLQLMELMKEKCIPLNQKAYFEIIASCSMLRDWKTA 701
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 83/357 (23%), Positives = 157/357 (43%), Gaps = 14/357 (3%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + + LI AYG G F +A +L M K G P VVS + L+ A GR + + I
Sbjct: 436 NIVSYNALIDAYGSAGMFKEAISLLHEMEKDGIPPDVVSISTLLTACGRCRQITKIDTIL 495
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
+S G + + + Y + ++ + +A E++ ++ S + PD ++++I
Sbjct: 496 EAAKSRGIKLNIVCYNSGIGSYLNFGDYGKALELYAVMM---ASNVNPDAVTYNILISGL 552
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSLMSF---ETNYKEVSKIYDQMQRAGLQPDV 271
K G Y ++ K F M + + + Y+SL+ + E + M+ +G PDV
Sbjct: 553 CKVGKYAESLKFFEDMVDLRIPLTKEVYSSLICSYVKQGKLTEAESTFSSMKESGCLPDV 612
Query: 272 VSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKC 331
++Y +I AY A +F+EM V+P + L++A ++ + +
Sbjct: 613 LTYTAMIEAYNDDGSWRNAWDLFKEMEGNTVQPDAIICSSLMEALNRGSQHERVLQLMEL 672
Query: 332 MRRDRCSP-DICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVN 390
M +++C P + +Y ++++ D + A + L +V T L+ K
Sbjct: 673 M-KEKCIPLNQKAYFEIIASCSMLRDWKTASEIIEHLDSSLSSISVGTLNHLLTFLGKCG 731
Query: 391 NLEKMMEIYDKMRVNGIKPNQTIFTTIMD---AYGKNKDFDSAVVWYKEMESCGFPP 444
E MM+++ KM + + +T ++ A GK + + + W ME G P
Sbjct: 732 KTECMMKLFYKMMSSCSTVGVSTYTVLLRNLLAVGKWRKYIEVLQW---MEDAGVSP 785
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 67/221 (30%), Positives = 108/221 (48%), Gaps = 19/221 (8%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
LI +Y KQG +AE S M + G P V+++TA++EAY G ++NA +F+ M+ +
Sbjct: 583 LICSYVKQGKLTEAESTFSSMKESGCLPDVLTYTAMIEAYNDDGSWRNAWDLFKEMEGNT 642
Query: 162 PRPSALTYQIILKLFVEA-NKFKEAEEVF--MTLLDEEKSPLKPDQKMFHMMIYMYKKAG 218
+P A II +EA N+ + E V M L+ E+ PL +QK + +I
Sbjct: 643 VQPDA----IICSSLMEALNRGSQHERVLQLMELMKEKCIPL--NQKAYFEIIASCSMLR 696
Query: 219 GYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVS---KIYDQMQRAGLQPDVVSYA 275
++ A ++ + S T N L++F + K++ +M + V +Y
Sbjct: 697 DWKTASEIIEHLDSSLSSISVGTLNHLLTFLGKCGKTECMMKLFYKMMSSCSTVGVSTYT 756
Query: 276 LLIN---AYGKARREEEALAVFEEMLDAGVRPTHKAY-NIL 312
+L+ A GK R+ E V + M DAGV PT Y N+L
Sbjct: 757 VLLRNLLAVGKWRKYIE---VLQWMEDAGVSPTLYMYQNVL 794
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 51/251 (20%), Positives = 110/251 (43%), Gaps = 6/251 (2%)
Query: 101 MLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSS 160
+LI+ K G + ++ K M + +++L+ +Y + G+ AE+ F M+ S
Sbjct: 547 ILISGLCKVGKYAESLKFFEDMVDLRIPLTKEVYSSLICSYVKQGKLTEAESTFSSMKES 606
Query: 161 GPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGY 220
G P LTY +++ + + ++ A ++F + E + ++PD + ++ + +
Sbjct: 607 GCLPDVLTYTAMIEAYNDDGSWRNAWDLFKEM---EGNTVQPDAIICSSLMEALNRGSQH 663
Query: 221 EKARKLFALMAERGVQQSTVTYNSLM---SFETNYKEVSKIYDQMQRAGLQPDVVSYALL 277
E+ +L LM E+ + + Y ++ S ++K S+I + + + V + L
Sbjct: 664 ERVLQLMELMKEKCIPLNQKAYFEIIASCSMLRDWKTASEIIEHLDSSLSSISVGTLNHL 723
Query: 278 INAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRC 337
+ GK + E + +F +M+ + Y +LL G + V + M
Sbjct: 724 LTFLGKCGKTECMMKLFYKMMSSCSTVGVSTYTVLLRNLLAVGKWRKYIEVLQWMEDAGV 783
Query: 338 SPDICSYTTML 348
SP + Y +L
Sbjct: 784 SPTLYMYQNVL 794
>gi|356575482|ref|XP_003555869.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g35130-like [Glycine max]
Length = 576
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 114/447 (25%), Positives = 212/447 (47%), Gaps = 41/447 (9%)
Query: 61 DLVLGTLVRLKQLKKWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLS 120
D + V+L+ K+W+ + + W+ ++S + + + + +LI A+G++ + +AE
Sbjct: 120 DDIFTVAVQLRMRKQWDSIISICRWILLRSSFKPDVICYNLLIEAFGQKLLYKEAESTYL 179
Query: 121 FMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEAN 180
+ + P+ ++ L++AY G + AEA+F M++ G SA+ Y + ++
Sbjct: 180 QLLEARCIPTEDTYALLIKAYCISGLLEKAEAVFAEMRNYGLPSSAVVYNAYINGLMKGG 239
Query: 181 KFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTV 240
+AEE+F + +K KP + + M+I +Y KAG A KLF M + +
Sbjct: 240 NSDKAEEIFKRM---KKDACKPTTETYTMLINLYGKAGKSFMALKLFHEMMSHDCKPNIC 296
Query: 241 TYNSLM---SFETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEM 297
TY +L+ + E ++ ++++QMQ AGL+PDV +Y L+ AY +A A +F M
Sbjct: 297 TYTALVNAFAREGLCEKAEEVFEQMQEAGLEPDVYAYNALMEAYSRAGYPYGAAEIFSLM 356
Query: 298 LDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDM 357
G P +YNIL+DA+ +G D A VFK M+R +P + S+ +LSAY +
Sbjct: 357 QHMGCEPDRASYNILVDAYGKAGFQDDAEAVFKDMKRVGITPTMKSHMVLLSAYSKMGSV 416
Query: 358 EGAEKFFRRLKQDG-----------------------------------FVPNVITYGTL 382
E+ ++ + G +V ++ TY L
Sbjct: 417 NKCEEILNQMCKSGLKLDTYVLNSMLNLYGRLGQFGKMEEVLRVMEKGSYVADISTYNIL 476
Query: 383 IKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGF 442
I Y + +E+M +++ + G+KP+ +T+ + AY K K + + ++EM G
Sbjct: 477 INRYGQAGFIERMEDLFQLLPSKGLKPDVVTWTSRIGAYSKKKLYLKCLEIFEEMIDDGC 536
Query: 443 PPDQKAKNILLSLAKTADERNEANELL 469
PD +LL+ D+ + ++
Sbjct: 537 YPDGGTAKVLLAACSNEDQTEQVTTVI 563
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 64/228 (28%), Positives = 112/228 (49%)
Query: 262 MQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGM 321
+ R+ +PDV+ Y LLI A+G+ +EA + + ++L+A PT Y +L+ A+ ISG+
Sbjct: 146 LLRSSFKPDVICYNLLIEAFGQKLLYKEAESTYLQLLEARCIPTEDTYALLIKAYCISGL 205
Query: 322 VDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGT 381
+++A VF MR Y ++ + + + AE+ F+R+K+D P TY
Sbjct: 206 LEKAEAVFAEMRNYGLPSSAVVYNAYINGLMKGGNSDKAEEIFKRMKKDACKPTTETYTM 265
Query: 382 LIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCG 441
LI Y K ++++ +M + KPN +T +++A+ + + A +++M+ G
Sbjct: 266 LINLYGKAGKSFMALKLFHEMMSHDCKPNICTYTALVNAFAREGLCEKAEEVFEQMQEAG 325
Query: 442 FPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGINGLSISVD 489
PD A N L+ A A E+ H EP +I VD
Sbjct: 326 LEPDVYAYNALMEAYSRAGYPYGAAEIFSLMQHMGCEPDRASYNILVD 373
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 72/279 (25%), Positives = 130/279 (46%), Gaps = 6/279 (2%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + L+ A+ ++G KAE+V M + G P V ++ ALMEAY R G A IF
Sbjct: 294 NICTYTALVNAFAREGLCEKAEEVFEQMQEAGLEPDVYAYNALMEAYSRAGYPYGAAEIF 353
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
MQ G P +Y I++ + +A +AE VF D ++ + P K +++ Y
Sbjct: 354 SLMQHMGCEPDRASYNILVDAYGKAGFQDDAEAVFK---DMKRVGITPTMKSHMVLLSAY 410
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFE---TNYKEVSKIYDQMQRAGLQPDV 271
K G K ++ M + G++ T NS+++ + ++ ++ M++ D+
Sbjct: 411 SKMGSVNKCEEILNQMCKSGLKLDTYVLNSMLNLYGRLGQFGKMEEVLRVMEKGSYVADI 470
Query: 272 VSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKC 331
+Y +LIN YG+A E +F+ + G++P + + A++ + + +F+
Sbjct: 471 STYNILINRYGQAGFIERMEDLFQLLPSKGLKPDVVTWTSRIGAYSKKKLYLKCLEIFEE 530
Query: 332 MRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQD 370
M D C PD + +L+A N E R + +D
Sbjct: 531 MIDDGCYPDGGTAKVLLAACSNEDQTEQVTTVIRTMHKD 569
Score = 43.5 bits (101), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 45/100 (45%)
Query: 101 MLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSS 160
+LI YG+ G + E + + KG P VV+ T+ + AY + Y IF M
Sbjct: 475 ILINRYGQAGFIERMEDLFQLLPSKGLKPDVVTWTSRIGAYSKKKLYLKCLEIFEEMIDD 534
Query: 161 GPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPL 200
G P T +++L ++ ++ V T+ + K+ L
Sbjct: 535 GCYPDGGTAKVLLAACSNEDQTEQVTTVIRTMHKDMKTVL 574
>gi|218199303|gb|EEC81730.1| hypothetical protein OsI_25362 [Oryza sativa Indica Group]
Length = 583
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 94/339 (27%), Positives = 174/339 (51%), Gaps = 4/339 (1%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
+I A G G++ KA ++ M + G P +V+H ++ A G +Y A + F M+ +
Sbjct: 87 VINACGAAGNWKKALELCKKMTENGVGPDLVTHNIVLSALKNGAQYSKAISYFEIMKGAN 146
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
T II+ V+ + EA E+F ++ E ++ PD + +++ Y G E
Sbjct: 147 VTSDTFTLNIIIHCLVKIGQCGEAIELFNSM-RERRTKCPPDVVTYTSIMHSYCIYGQVE 205
Query: 222 KARKLFALMAERGVQQSTVTYNSLMSFETN---YKEVSKIYDQMQRAGLQPDVVSYALLI 278
+ +F LM GV+ + V YNSL+ + ++E I++ +++ GL+PD+VSY L+
Sbjct: 206 NCKAIFDLMVAEGVKPNIVAYNSLLGAYASRGMHREALAIFNLIKKNGLRPDIVSYTSLL 265
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCS 338
NAYG++ + E+A VF +M +P +YN L+DA+ +GM+ +A + M +D
Sbjct: 266 NAYGRSAQPEKAREVFNKMKKNSCKPNKVSYNALIDAYGSAGMLKEAVGLLHEMEKDGIQ 325
Query: 339 PDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEI 398
PD+ S +T+L+A + E + G N + Y + IK Y + EK +E+
Sbjct: 326 PDVVSISTLLAACGRCRQITRIETILEAARSRGIDLNTVAYNSGIKSYLSFGDYEKALEL 385
Query: 399 YDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEM 437
Y MR + +KP+ + ++ K + ++ ++++M
Sbjct: 386 YTSMRESNVKPDAVTYNILISGSSKLGKYTESLRFFEDM 424
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 95/358 (26%), Positives = 174/358 (48%), Gaps = 8/358 (2%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
LI A+ + G + A ++ M + P+ ++ ++ A G G +K A + ++M +G
Sbjct: 52 LIHAHSRAGQWRWAINIMEDMLRAAIPPTRTTYNNVINACGAAGNWKKALELCKKMTENG 111
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
P +T+ I+L ++ +A F + + + + D +++I+ K G
Sbjct: 112 VGPDLVTHNIVLSALKNGAQYSKAISYFEIM---KGANVTSDTFTLNIIIHCLVKIGQCG 168
Query: 222 KARKLFALMAERGVQ--QSTVTYNSLMSFETNYKEVSK---IYDQMQRAGLQPDVVSYAL 276
+A +LF M ER + VTY S+M Y +V I+D M G++P++V+Y
Sbjct: 169 EAIELFNSMRERRTKCPPDVVTYTSIMHSYCIYGQVENCKAIFDLMVAEGVKPNIVAYNS 228
Query: 277 LINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDR 336
L+ AY EALA+F + G+RP +Y LL+A+ S ++AR VF M+++
Sbjct: 229 LLGAYASRGMHREALAIFNLIKKNGLRPDIVSYTSLLNAYGRSAQPEKAREVFNKMKKNS 288
Query: 337 CSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMM 396
C P+ SY ++ AY +A ++ A +++DG P+V++ TL+ + + ++
Sbjct: 289 CKPNKVSYNALIDAYGSAGMLKEAVGLLHEMEKDGIQPDVVSISTLLAACGRCRQITRIE 348
Query: 397 EIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLS 454
I + R GI N + + + +Y D++ A+ Y M PD NIL+S
Sbjct: 349 TILEAARSRGIDLNTVAYNSGIKSYLSFGDYEKALELYTSMRESNVKPDAVTYNILIS 406
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 83/323 (25%), Positives = 156/323 (48%), Gaps = 8/323 (2%)
Query: 137 LMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEE 196
++ Y R + A +F MQ +P A Y ++ A +++ A + +L
Sbjct: 17 MIRLYARHNQVDQARGLFFEMQEWRCKPDADIYNSLIHAHSRAGQWRWAINIMEDML--- 73
Query: 197 KSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVS 256
++ + P + ++ +I AG ++KA +L M E GV VT+N ++S N + S
Sbjct: 74 RAAIPPTRTTYNNVINACGAAGNWKKALELCKKMTENGVGPDLVTHNIVLSALKNGAQYS 133
Query: 257 KI---YDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVR--PTHKAYNI 311
K ++ M+ A + D + ++I+ K + EA+ +F M + + P Y
Sbjct: 134 KAISYFEIMKGANVTSDTFTLNIIIHCLVKIGQCGEAIELFNSMRERRTKCPPDVVTYTS 193
Query: 312 LLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDG 371
++ ++ I G V+ + +F M + P+I +Y ++L AY + A F +K++G
Sbjct: 194 IMHSYCIYGQVENCKAIFDLMVAEGVKPNIVAYNSLLGAYASRGMHREALAIFNLIKKNG 253
Query: 372 FVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAV 431
P++++Y +L+ Y + EK E+++KM+ N KPN+ + ++DAYG AV
Sbjct: 254 LRPDIVSYTSLLNAYGRSAQPEKAREVFNKMKKNSCKPNKVSYNALIDAYGSAGMLKEAV 313
Query: 432 VWYKEMESCGFPPDQKAKNILLS 454
EME G PD + + LL+
Sbjct: 314 GLLHEMEKDGIQPDVVSISTLLA 336
Score = 128 bits (321), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 73/322 (22%), Positives = 163/322 (50%), Gaps = 8/322 (2%)
Query: 169 YQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFA 228
Y ++++L+ N+ +A +F + ++ KPD +++ +I+ + +AG + A +
Sbjct: 14 YGMMIRLYARHNQVDQARGLFFEM---QEWRCKPDADIYNSLIHAHSRAGQWRWAINIME 70
Query: 229 LMAERGVQQSTVTYNSLMSF---ETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKAR 285
M + + TYN++++ N+K+ ++ +M G+ PD+V++ ++++A
Sbjct: 71 DMLRAAIPPTRTTYNNVINACGAAGNWKKALELCKKMTENGVGPDLVTHNIVLSALKNGA 130
Query: 286 REEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMR--RDRCSPDICS 343
+ +A++ FE M A V NI++ G +A +F MR R +C PD+ +
Sbjct: 131 QYSKAISYFEIMKGANVTSDTFTLNIIIHCLVKIGQCGEAIELFNSMRERRTKCPPDVVT 190
Query: 344 YTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMR 403
YT+++ +Y +E + F + +G PN++ Y +L+ YA + + I++ ++
Sbjct: 191 YTSIMHSYCIYGQVENCKAIFDLMVAEGVKPNIVAYNSLLGAYASRGMHREALAIFNLIK 250
Query: 404 VNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERN 463
NG++P+ +T++++AYG++ + A + +M+ P++ + N L+ +A
Sbjct: 251 KNGLRPDIVSYTSLLNAYGRSAQPEKAREVFNKMKKNSCKPNKVSYNALIDAYGSAGMLK 310
Query: 464 EANELLGNFNHPNNEPGINGLS 485
EA LL +P + +S
Sbjct: 311 EAVGLLHEMEKDGIQPDVVSIS 332
Score = 38.5 bits (88), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 22/100 (22%), Positives = 49/100 (49%)
Query: 369 QDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFD 428
QD + YG +I+ YA+ N +++ ++ +M+ KP+ I+ +++ A+ + +
Sbjct: 4 QDNYCARNDIYGMMIRLYARHNQVDQARGLFFEMQEWRCKPDADIYNSLIHAHSRAGQWR 63
Query: 429 SAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANEL 468
A+ ++M PP + N +++ A +A EL
Sbjct: 64 WAINIMEDMLRAAIPPTRTTYNNVINACGAAGNWKKALEL 103
>gi|357113916|ref|XP_003558747.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g01110-like [Brachypodium distachyon]
Length = 651
Score = 173 bits (438), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 106/397 (26%), Positives = 192/397 (48%), Gaps = 6/397 (1%)
Query: 86 LRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGG 145
L + S + N +++ +Y K F + + V+S M K+ P VV+H +++A R G
Sbjct: 149 LVLSSNSEVNTYTLNIMVHSYCKTLQFGEVDTVISEMEKRCVFPDVVTHNVMVDARFRAG 208
Query: 146 RYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQK 205
+ A A+ M S G +P +TY +LK + ++ +A EVF + + + PD +
Sbjct: 209 DVEAAMALIDSMVSKGIKPGLVTYNSVLKGLLRNGRWDKAREVFRAM---DACGVAPDVR 265
Query: 206 MFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEV---SKIYDQM 262
F+M+I + +AG E+A + + M R V V+++ L+ T E+ ++ +M
Sbjct: 266 SFNMLIGGFCRAGELEEALRFYKEMRGRRVTPDVVSFSCLIGLFTRRGEMDHAAEYLREM 325
Query: 263 QRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMV 322
+ GL PD V Y ++I + +A EAL V +EM+ G P YN LL+ +
Sbjct: 326 REFGLMPDGVIYTMVIGGFCRAGLMLEALRVRDEMVAFGCLPDVVTYNTLLNGLCKERRL 385
Query: 323 DQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTL 382
A + M+ PD+C++TT++ Y ++E A +FF + P+++TY TL
Sbjct: 386 SDAEELLNEMKERGVPPDLCTFTTLIHGYCRDGNIEKALQFFDTISDQRLRPDIVTYNTL 445
Query: 383 IKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGF 442
I G + +L K E++D M I PN ++ ++D++ + D+A + EM + G
Sbjct: 446 IDGMCRQGDLGKANELWDDMHSREIFPNHVTYSILIDSHCEKGQVDNAFAFLDEMVNKGI 505
Query: 443 PPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEP 479
P+ N ++ + ++ + L H P
Sbjct: 506 VPNIMTYNSIIKGYCRSGNVSKGQQFLPKMRHDKVMP 542
Score = 152 bits (384), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 90/355 (25%), Positives = 179/355 (50%), Gaps = 8/355 (2%)
Query: 97 MDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRR 156
+ F LI + ++G+ + A + L M + G P V +T ++ + R G A +
Sbjct: 300 VSFSCLIGLFTRRGEMDHAAEYLREMREFGLMPDGVIYTMVIGGFCRAGLMLEALRVRDE 359
Query: 157 MQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKS-PLKPDQKMFHMMIYMYK 215
M + G P +TY +L + + +AEE LL+E K + PD F +I+ Y
Sbjct: 360 MVAFGCLPDVVTYNTLLNGLCKERRLSDAEE----LLNEMKERGVPPDLCTFTTLIHGYC 415
Query: 216 KAGGYEKARKLFALMAERGVQQSTVTYNSL---MSFETNYKEVSKIYDQMQRAGLQPDVV 272
+ G EKA + F ++++ ++ VTYN+L M + + + ++++D M + P+ V
Sbjct: 416 RDGNIEKALQFFDTISDQRLRPDIVTYNTLIDGMCRQGDLGKANELWDDMHSREIFPNHV 475
Query: 273 SYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCM 332
+Y++LI+++ + + + A A +EM++ G+ P YN ++ + SG V + + M
Sbjct: 476 TYSILIDSHCEKGQVDNAFAFLDEMVNKGIVPNIMTYNSIIKGYCRSGNVSKGQQFLPKM 535
Query: 333 RRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNL 392
R D+ PD+ +Y T++ YV M A + ++ + P+ +TY +I G++ N+
Sbjct: 536 RHDKVMPDLITYNTLIHGYVKEGKMHEAFNLLKIMENENVQPDAVTYNMIISGFSVHGNM 595
Query: 393 EKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQK 447
++ +Y KM GI+P++ + ++++ + + + + EM G PD K
Sbjct: 596 QEADWVYKKMGARGIEPDRYTYMSMINGHVVAGNSKKSFQLHDEMLQKGLAPDDK 650
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 87/341 (25%), Positives = 156/341 (45%), Gaps = 6/341 (1%)
Query: 154 FRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYM 213
+R + SS + T I++ + + +F E + V + EK + PD ++M+
Sbjct: 147 YRLVLSSNSEVNTYTLNIMVHSYCKTLQFGEVDTVISEM---EKRCVFPDVVTHNVMVDA 203
Query: 214 YKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSF---ETNYKEVSKIYDQMQRAGLQPD 270
+AG E A L M +G++ VTYNS++ + + +++ M G+ PD
Sbjct: 204 RFRAGDVEAAMALIDSMVSKGIKPGLVTYNSVLKGLLRNGRWDKAREVFRAMDACGVAPD 263
Query: 271 VVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFK 330
V S+ +LI + +A EEAL ++EM V P +++ L+ F G +D A +
Sbjct: 264 VRSFNMLIGGFCRAGELEEALRFYKEMRGRRVTPDVVSFSCLIGLFTRRGEMDHAAEYLR 323
Query: 331 CMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVN 390
MR PD YT ++ + A M A + + G +P+V+TY TL+ G K
Sbjct: 324 EMREFGLMPDGVIYTMVIGGFCRAGLMLEALRVRDEMVAFGCLPDVVTYNTLLNGLCKER 383
Query: 391 NLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKN 450
L E+ ++M+ G+ P+ FTT++ Y ++ + + A+ ++ + PD N
Sbjct: 384 RLSDAEELLNEMKERGVPPDLCTFTTLIHGYCRDGNIEKALQFFDTISDQRLRPDIVTYN 443
Query: 451 ILLSLAKTADERNEANELLGNFNHPNNEPGINGLSISVDEE 491
L+ + +ANEL + + P SI +D
Sbjct: 444 TLIDGMCRQGDLGKANELWDDMHSREIFPNHVTYSILIDSH 484
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 75/320 (23%), Positives = 155/320 (48%), Gaps = 6/320 (1%)
Query: 153 IFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIY 212
I + +S P P + ++++ + ++ K +EA E F LLD + P+ + ++
Sbjct: 76 IVSSLLASSPTPQPQVFDLLIRTYTQSRKPREAFEAFRLLLD-HRVPIP--AAASNALLA 132
Query: 213 MYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSF---ETNYKEVSKIYDQMQRAGLQP 269
+AG + L+ + +T T N ++ + EV + +M++ + P
Sbjct: 133 ALSRAGWPHLTADAYRLVLSSNSEVNTYTLNIMVHSYCKTLQFGEVDTVISEMEKRCVFP 192
Query: 270 DVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVF 329
DVV++ ++++A +A E A+A+ + M+ G++P YN +L +G D+AR VF
Sbjct: 193 DVVTHNVMVDARFRAGDVEAAMALIDSMVSKGIKPGLVTYNSVLKGLLRNGRWDKAREVF 252
Query: 330 KCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKV 389
+ M +PD+ S+ ++ + A ++E A +F++ ++ P+V+++ LI + +
Sbjct: 253 RAMDACGVAPDVRSFNMLIGGFCRAGELEEALRFYKEMRGRRVTPDVVSFSCLIGLFTRR 312
Query: 390 NNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAK 449
++ E +MR G+ P+ I+T ++ + + A+ EM + G PD
Sbjct: 313 GEMDHAAEYLREMREFGLMPDGVIYTMVIGGFCRAGLMLEALRVRDEMVAFGCLPDVVTY 372
Query: 450 NILLSLAKTADERNEANELL 469
N LL+ ++A ELL
Sbjct: 373 NTLLNGLCKERRLSDAEELL 392
Score = 75.5 bits (184), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 44/179 (24%), Positives = 90/179 (50%), Gaps = 6/179 (3%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + + +LI ++ ++G + A L M KG P+++++ ++++ Y R G +
Sbjct: 473 NHVTYSILIDSHCEKGQVDNAFAFLDEMVNKGIVPNIMTYNSIIKGYCRSGNVSKGQQFL 532
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
+M+ P +TY ++ +V+ K EA F L E ++PD ++M+I +
Sbjct: 533 PKMRHDKVMPDLITYNTLIHGYVKEGKMHEA---FNLLKIMENENVQPDAVTYNMIISGF 589
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFET---NYKEVSKIYDQMQRAGLQPD 270
G ++A ++ M RG++ TY S+++ N K+ +++D+M + GL PD
Sbjct: 590 SVHGNMQEADWVYKKMGARGIEPDRYTYMSMINGHVVAGNSKKSFQLHDEMLQKGLAPD 648
>gi|147779268|emb|CAN70089.1| hypothetical protein VITISV_038171 [Vitis vinifera]
Length = 838
Score = 173 bits (438), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 106/366 (28%), Positives = 187/366 (51%), Gaps = 7/366 (1%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
E + +L+ AY G KAE V + M K G+ PS V + A ++ +GG + A IF
Sbjct: 132 TEDTYALLLKAYCTSGLLEKAEAVFAEMRKYGFPPSAVVYNAYIDGLMKGGDTQKAVEIF 191
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
RM+ +PS TY +++ L+ +A+K A +VF + ++ KP+ F ++ +
Sbjct: 192 ERMKRDRCQPSTATYTMLINLYGKASKSYMALKVFHEMRSQK---CKPNICTFTALVNAF 248
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYK---EVSKIYDQMQRAGLQPDV 271
+ G EKA ++F + E G++ YN+LM + ++I+ MQ G +PD
Sbjct: 249 AREGLCEKAEEIFEQLQEAGLEPDVYAYNALMEAYSRAGFPYGAAEIFSLMQHMGCEPDR 308
Query: 272 VSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKC 331
SY ++++AYG+A E+A AVFE M G+ PT K++ +LL A++ +G V + +
Sbjct: 309 ASYNIMVDAYGRAGLHEDAQAVFEVMKRLGITPTMKSHMLLLSAYSRAGKVAKCEEIVNQ 368
Query: 332 MRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNN 391
M + PD +ML+ Y E E+ +++ + ++ TY LI Y +
Sbjct: 369 MHKSGIKPDTFVLNSMLNLYGRLGQFEKMEEVLTAMEKGPYPADISTYNILINIYGRAGF 428
Query: 392 LEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPD-QKAKN 450
+M E++ + + P+ +T+ + AY + K ++ + ++EM G PD AKN
Sbjct: 429 FARMEELFRSLPARNLIPDVVTWTSRIGAYSRRKQYNRCLEVFEEMIDAGCYPDGGTAKN 488
Query: 451 ILLSLA 456
+LL +A
Sbjct: 489 VLLKVA 494
Score = 158 bits (400), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 106/412 (25%), Positives = 194/412 (47%), Gaps = 31/412 (7%)
Query: 76 WNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHT 135
W+ + V LR+ WD ++LI + + + + P V+ +
Sbjct: 62 WDDIINVAVQLRLNKQWDA-----IVLICGW--------------ILYRSSFHPDVICYN 102
Query: 136 ALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDE 195
L++AYG+ YK AE+ + + + P+ TY ++LK + + ++AE VF +
Sbjct: 103 LLIDAYGQKSLYKKAESTYLELLEARCVPTEDTYALLLKAYCTSGLLEKAEAVFAEM--- 159
Query: 196 EKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEV 255
K P +++ I K G +KA ++F M Q ST TY L++ Y +
Sbjct: 160 RKYGFPPSAVVYNAYIDGLMKGGDTQKAVEIFERMKRDRCQPSTATYTMLINL---YGKA 216
Query: 256 SK------IYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAY 309
SK ++ +M+ +P++ ++ L+NA+ + E+A +FE++ +AG+ P AY
Sbjct: 217 SKSYMALKVFHEMRSQKCKPNICTFTALVNAFAREGLCEKAEEIFEQLQEAGLEPDVYAY 276
Query: 310 NILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQ 369
N L++A++ +G A +F M+ C PD SY M+ AY A E A+ F +K+
Sbjct: 277 NALMEAYSRAGFPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHEDAQAVFEVMKR 336
Query: 370 DGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDS 429
G P + ++ L+ Y++ + K EI ++M +GIKP+ + ++++ YG+ F+
Sbjct: 337 LGITPTMKSHMLLLSAYSRAGKVAKCEEIVNQMHKSGIKPDTFVLNSMLNLYGRLGQFEK 396
Query: 430 AVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGI 481
ME +P D NIL+++ A EL + N P +
Sbjct: 397 MEEVLTAMEKGPYPADISTYNILINIYGRAGFFARMEELFRSLPARNLIPDV 448
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 67/228 (29%), Positives = 112/228 (49%)
Query: 262 MQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGM 321
+ R+ PDV+ Y LLI+AYG+ ++A + + E+L+A PT Y +LL A+ SG+
Sbjct: 89 LYRSSFHPDVICYNLLIDAYGQKSLYKKAESTYLELLEARCVPTEDTYALLLKAYCTSGL 148
Query: 322 VDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGT 381
+++A VF MR+ P Y + + D + A + F R+K+D P+ TY
Sbjct: 149 LEKAEAVFAEMRKYGFPPSAVVYNAYIDGLMKGGDTQKAVEIFERMKRDRCQPSTATYTM 208
Query: 382 LIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCG 441
LI Y K + ++++ +MR KPN FT +++A+ + + A +++++ G
Sbjct: 209 LINLYGKASKSYMALKVFHEMRSQKCKPNICTFTALVNAFAREGLCEKAEEIFEQLQEAG 268
Query: 442 FPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGINGLSISVD 489
PD A N L+ A A E+ H EP +I VD
Sbjct: 269 LEPDVYAYNALMEAYSRAGFPYGAAEIFSLMQHMGCEPDRASYNIMVD 316
>gi|224092332|ref|XP_002309562.1| predicted protein [Populus trichocarpa]
gi|222855538|gb|EEE93085.1| predicted protein [Populus trichocarpa]
Length = 590
Score = 172 bits (437), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 119/479 (24%), Positives = 218/479 (45%), Gaps = 40/479 (8%)
Query: 31 WRRLMNQIEEVG---SAVAVLRSERTRGQPLPKDLVLGTLV-RLKQLKKWNVVSEVLEWL 86
+ +L++ I ++G AV L + P L L+ L++ ++ V +
Sbjct: 97 FTKLLSAIVKMGQYYGAVISLSKQMELAGLSPDIYTLSILIDCFSHLQRVDLAFSVFSKM 156
Query: 87 RIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGR 146
I+ + + F LI K G F +A + G P+V ++T ++ + G
Sbjct: 157 -IKLGLQPDAVTFNTLINGLCKVGKFAQAVEFFDDFEASGCQPTVYTYTTIINGLCKIGE 215
Query: 147 YKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSP------- 199
A +F++M+ +G +P+ +TY I++ + EA ++F + + SP
Sbjct: 216 TTAAAGLFKKMEEAGCQPNVVTYNILIDSLCKDKLVNEALDIFSYMKAKRISPDIFTYNS 275
Query: 200 -------------------------LKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERG 234
+ P+ F++++ K G +A+ +F M E G
Sbjct: 276 LIQGLCNFRRWKEASALLNEMTSLNIMPNIFTFNVLVDAICKEGKVSEAQGVFKTMTEMG 335
Query: 235 VQQSTVTYNSLM---SFETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEAL 291
V+ VTY+SLM S E K++D M G +PD SY +LI Y KA+R +EA
Sbjct: 336 VEPDVVTYSSLMYGYSLRMEIVEARKLFDAMITKGCKPDAFSYNILIKGYCKAKRIDEAK 395
Query: 292 AVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAY 351
+F EM+ G+ P + YN L+ G + +A+ +FK M + PD+ +Y+ +L +
Sbjct: 396 QLFNEMIHQGLTPDNVNYNTLIHGLCQLGRLREAQDLFKNMHSNGNLPDLFTYSMLLDGF 455
Query: 352 VNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQ 411
+ A + FR ++ P++ Y LI K NL+ +++ ++ V G+ PN
Sbjct: 456 CKEGYLGKAFRLFRVMQSTYLKPDIAMYNILIDAMCKFGNLKDARKLFSELFVQGLLPNV 515
Query: 412 TIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLG 470
I+TTI++ K D A+ ++ ME G PPD+ + N+++ + + A +L+G
Sbjct: 516 QIYTTIINNLCKEGLLDEALEAFRNMEGDGCPPDEFSYNVIIRGFLQYKDESRAAQLIG 574
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 101/361 (27%), Positives = 170/361 (47%), Gaps = 7/361 (1%)
Query: 97 MDFLMLITAYGKQGDFNKAEKVLS-FMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFR 155
+ F L++A K G + A LS M G +P + + + L++ + R A ++F
Sbjct: 95 IQFTKLLSAIVKMGQYYGAVISLSKQMELAGLSPDIYTLSILIDCFSHLQRVDLAFSVFS 154
Query: 156 RMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYK 215
+M G +P A+T+ ++ + KF +A E F D E S +P + +I
Sbjct: 155 KMIKLGLQPDAVTFNTLINGLCKVGKFAQAVEFFD---DFEASGCQPTVYTYTTIINGLC 211
Query: 216 KAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSK---IYDQMQRAGLQPDVV 272
K G A LF M E G Q + VTYN L+ K V++ I+ M+ + PD+
Sbjct: 212 KIGETTAAAGLFKKMEEAGCQPNVVTYNILIDSLCKDKLVNEALDIFSYMKAKRISPDIF 271
Query: 273 SYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCM 332
+Y LI RR +EA A+ EM + P +N+L+DA G V +A+ VFK M
Sbjct: 272 TYNSLIQGLCNFRRWKEASALLNEMTSLNIMPNIFTFNVLVDAICKEGKVSEAQGVFKTM 331
Query: 333 RRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNL 392
PD+ +Y++++ Y ++ A K F + G P+ +Y LIKGY K +
Sbjct: 332 TEMGVEPDVVTYSSLMYGYSLRMEIVEARKLFDAMITKGCKPDAFSYNILIKGYCKAKRI 391
Query: 393 EKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNIL 452
++ +++++M G+ P+ + T++ + A +K M S G PD ++L
Sbjct: 392 DEAKQLFNEMIHQGLTPDNVNYNTLIHGLCQLGRLREAQDLFKNMHSNGNLPDLFTYSML 451
Query: 453 L 453
L
Sbjct: 452 L 452
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 96/351 (27%), Positives = 166/351 (47%), Gaps = 6/351 (1%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + + +LI + K N+A + S+M K +P + ++ +L++ R+K A A+
Sbjct: 234 NVVTYNILIDSLCKDKLVNEALDIFSYMKAKRISPDIFTYNSLIQGLCNFRRWKEASALL 293
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
M S P+ T+ +++ + K EA+ VF T+ + ++PD + ++Y Y
Sbjct: 294 NEMTSLNIMPNIFTFNVLVDAICKEGKVSEAQGVFKTM---TEMGVEPDVVTYSSLMYGY 350
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYK---EVSKIYDQMQRAGLQPDV 271
+ARKLF M +G + +YN L+ K E +++++M GL PD
Sbjct: 351 SLRMEIVEARKLFDAMITKGCKPDAFSYNILIKGYCKAKRIDEAKQLFNEMIHQGLTPDN 410
Query: 272 VSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKC 331
V+Y LI+ + R EA +F+ M G P Y++LLD F G + +A +F+
Sbjct: 411 VNYNTLIHGLCQLGRLREAQDLFKNMHSNGNLPDLFTYSMLLDGFCKEGYLGKAFRLFRV 470
Query: 332 MRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNN 391
M+ PDI Y ++ A +++ A K F L G +PNV Y T+I K
Sbjct: 471 MQSTYLKPDIAMYNILIDAMCKFGNLKDARKLFSELFVQGLLPNVQIYTTIINNLCKEGL 530
Query: 392 LEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGF 442
L++ +E + M +G P++ + I+ + + KD A EM GF
Sbjct: 531 LDEALEAFRNMEGDGCPPDEFSYNVIIRGFLQYKDESRAAQLIGEMRDRGF 581
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 91/365 (24%), Positives = 165/365 (45%), Gaps = 7/365 (1%)
Query: 129 PSVVSHTALMEAYGRGGRYKNAE-AIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEE 187
P ++ T L+ A + G+Y A ++ ++M+ +G P T I++ F + A
Sbjct: 92 PCIIQFTKLLSAIVKMGQYYGAVISLSKQMELAGLSPDIYTLSILIDCFSHLQRVDLAFS 151
Query: 188 VFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMS 247
VF ++ K L+PD F+ +I K G + +A + F G Q + TY ++++
Sbjct: 152 VFSKMI---KLGLQPDAVTFNTLINGLCKVGKFAQAVEFFDDFEASGCQPTVYTYTTIIN 208
Query: 248 FETNYKEVSK---IYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRP 304
E + ++ +M+ AG QP+VV+Y +LI++ K + EAL +F M + P
Sbjct: 209 GLCKIGETTAAAGLFKKMEEAGCQPNVVTYNILIDSLCKDKLVNEALDIFSYMKAKRISP 268
Query: 305 THKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFF 364
YN L+ +A + M P+I ++ ++ A + A+ F
Sbjct: 269 DIFTYNSLIQGLCNFRRWKEASALLNEMTSLNIMPNIFTFNVLVDAICKEGKVSEAQGVF 328
Query: 365 RRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKN 424
+ + + G P+V+TY +L+ GY+ + + +++D M G KP+ + ++ Y K
Sbjct: 329 KTMTEMGVEPDVVTYSSLMYGYSLRMEIVEARKLFDAMITKGCKPDAFSYNILIKGYCKA 388
Query: 425 KDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGINGL 484
K D A + EM G PD N L+ EA +L N + N P +
Sbjct: 389 KRIDEAKQLFNEMIHQGLTPDNVNYNTLIHGLCQLGRLREAQDLFKNMHSNGNLPDLFTY 448
Query: 485 SISVD 489
S+ +D
Sbjct: 449 SMLLD 453
Score = 122 bits (306), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 81/319 (25%), Positives = 152/319 (47%), Gaps = 8/319 (2%)
Query: 59 PKDLVLGTLVR-LKQLKKWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEK 117
P +L++ L ++W S +L + + N F +L+ A K+G ++A+
Sbjct: 268 PDIFTYNSLIQGLCNFRRWKEASALLNEMTSLNIMP-NIFTFNVLVDAICKEGKVSEAQG 326
Query: 118 VLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFV 177
V M + G P VV++++LM Y A +F M + G +P A +Y I++K +
Sbjct: 327 VFKTMTEMGVEPDVVTYSSLMYGYSLRMEIVEARKLFDAMITKGCKPDAFSYNILIKGYC 386
Query: 178 EANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQ 237
+A + EA+++F ++ + L PD ++ +I+ + G +A+ LF M G
Sbjct: 387 KAKRIDEAKQLFNEMIHQ---GLTPDNVNYNTLIHGLCQLGRLREAQDLFKNMHSNGNLP 443
Query: 238 STVTYNSLM---SFETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVF 294
TY+ L+ E + +++ MQ L+PD+ Y +LI+A K ++A +F
Sbjct: 444 DLFTYSMLLDGFCKEGYLGKAFRLFRVMQSTYLKPDIAMYNILIDAMCKFGNLKDARKLF 503
Query: 295 EEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNA 354
E+ G+ P + Y +++ G++D+A F+ M D C PD SY ++ ++
Sbjct: 504 SELFVQGLLPNVQIYTTIINNLCKEGLLDEALEAFRNMEGDGCPPDEFSYNVIIRGFLQY 563
Query: 355 SDMEGAEKFFRRLKQDGFV 373
D A + ++ GFV
Sbjct: 564 KDESRAAQLIGEMRDRGFV 582
>gi|222636666|gb|EEE66798.1| hypothetical protein OsJ_23544 [Oryza sativa Japonica Group]
Length = 665
Score = 172 bits (437), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 94/339 (27%), Positives = 174/339 (51%), Gaps = 4/339 (1%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
+I A G G++ KA ++ M + G P +V+H ++ A G +Y A + F M+ +
Sbjct: 87 VINACGAAGNWKKALELCKKMTENGVGPDLVTHNIVLSALKNGAQYSKAISYFEIMKGAN 146
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
T II+ V+ + EA E+F ++ E ++ PD + +++ Y G E
Sbjct: 147 VTSDTFTLNIIIHCLVKIGQCGEAIELFNSM-RERRTKCPPDVVTYTSIMHSYCIYGQVE 205
Query: 222 KARKLFALMAERGVQQSTVTYNSLMSFETN---YKEVSKIYDQMQRAGLQPDVVSYALLI 278
+ +F LM GV+ + V YNSL+ + ++E I++ +++ GL+PD+VSY L+
Sbjct: 206 NCKAIFDLMVAEGVKPNIVAYNSLLGAYASRGMHREALAIFNLIKKNGLRPDIVSYTSLL 265
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCS 338
NAYG++ + E+A VF +M +P +YN L+DA+ +GM+ +A + M +D
Sbjct: 266 NAYGRSAQPEKAREVFNKMKKNSCKPNKVSYNALIDAYGSAGMLKEAVGLLHEMEKDGIQ 325
Query: 339 PDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEI 398
PD+ S +T+L+A + E + G N + Y + IK Y + EK +E+
Sbjct: 326 PDVVSISTLLAACGRCRQITRIETILEAARSRGIDLNTVAYNSGIKSYLSFGDYEKALEL 385
Query: 399 YDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEM 437
Y MR + +KP+ + ++ K + ++ ++++M
Sbjct: 386 YTSMRESNVKPDAVTYNILISGSSKLGKYTESLRFFEDM 424
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 95/358 (26%), Positives = 174/358 (48%), Gaps = 8/358 (2%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
LI A+ + G + A ++ M + P+ ++ ++ A G G +K A + ++M +G
Sbjct: 52 LIHAHSRAGQWRWAINIMEDMLRAAIPPTRTTYNNVINACGAAGNWKKALELCKKMTENG 111
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
P +T+ I+L ++ +A F + + + + D +++I+ K G
Sbjct: 112 VGPDLVTHNIVLSALKNGAQYSKAISYFEIM---KGANVTSDTFTLNIIIHCLVKIGQCG 168
Query: 222 KARKLFALMAERGVQQS--TVTYNSLMSFETNYKEVSK---IYDQMQRAGLQPDVVSYAL 276
+A +LF M ER + VTY S+M Y +V I+D M G++P++V+Y
Sbjct: 169 EAIELFNSMRERRTKCPPDVVTYTSIMHSYCIYGQVENCKAIFDLMVAEGVKPNIVAYNS 228
Query: 277 LINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDR 336
L+ AY EALA+F + G+RP +Y LL+A+ S ++AR VF M+++
Sbjct: 229 LLGAYASRGMHREALAIFNLIKKNGLRPDIVSYTSLLNAYGRSAQPEKAREVFNKMKKNS 288
Query: 337 CSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMM 396
C P+ SY ++ AY +A ++ A +++DG P+V++ TL+ + + ++
Sbjct: 289 CKPNKVSYNALIDAYGSAGMLKEAVGLLHEMEKDGIQPDVVSISTLLAACGRCRQITRIE 348
Query: 397 EIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLS 454
I + R GI N + + + +Y D++ A+ Y M PD NIL+S
Sbjct: 349 TILEAARSRGIDLNTVAYNSGIKSYLSFGDYEKALELYTSMRESNVKPDAVTYNILIS 406
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 99/404 (24%), Positives = 196/404 (48%), Gaps = 31/404 (7%)
Query: 37 QIEEVGSAVAVLRSERTRGQPLPKDLVLGTLVRLKQLKKWNVVSEVLEW-----LRIQSW 91
+I + G A+ + S R R P D+V T + + + + +V L +
Sbjct: 163 KIGQCGEAIELFNSMRERRTKCPPDVVTYTSI----MHSYCIYGQVENCKAIFDLMVAEG 218
Query: 92 WDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAE 151
N + + L+ AY +G +A + + + K G P +VS+T+L+ AYGR + + A
Sbjct: 219 VKPNIVAYNSLLGAYASRGMHREALAIFNLIKKNGLRPDIVSYTSLLNAYGRSAQPEKAR 278
Query: 152 AIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDE-EKSPLKPDQKMFHMM 210
+F +M+ + +P+ ++Y ++ + A KEA + LL E EK ++PD +
Sbjct: 279 EVFNKMKKNSCKPNKVSYNALIDAYGSAGMLKEA----VGLLHEMEKDGIQPDVVSISTL 334
Query: 211 IYMYKKAGGYEKARKLFALMAERGVQQSTVTYNS----LMSFETNYKEVSKIYDQMQRAG 266
+ + + + RG+ +TV YNS +SF +Y++ ++Y M+ +
Sbjct: 335 LAACGRCRQITRIETILEAARSRGIDLNTVAYNSGIKSYLSF-GDYEKALELYTSMRESN 393
Query: 267 LQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQAR 326
++PD V+Y +LI+ K + E+L FE+M+D+ V T + G + +A
Sbjct: 394 VKPDAVTYNILISGSSKLGKYTESLRFFEDMVDSKVSSTKE------------GKLSEAE 441
Query: 327 TVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGY 386
+ F M++ C PD+ +YTT++ AY + A F+ ++ +G P+ I +L++ +
Sbjct: 442 STFSSMKKSGCFPDVLTYTTLIQAYNAGGGWKRAWDLFKEMEVNGIPPDAIICSSLMEAF 501
Query: 387 AKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSA 430
K E+++++ + M+ I NQ + I+ + +D+ +A
Sbjct: 502 NKGGEPERVLQLMEFMKKKSIPLNQKSYFEIIASCTMIRDWKTA 545
Score = 142 bits (359), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 118/465 (25%), Positives = 215/465 (46%), Gaps = 46/465 (9%)
Query: 61 DLVLGTLVRLKQLKKWNVVSEVLEWLRIQSWWDFNEMDFLM--LITAYGKQGDFNKAEKV 118
DLV +V L LK S+ + + I + F + +I K G +A ++
Sbjct: 115 DLVTHNIV-LSALKNGAQYSKAISYFEIMKGANVTSDTFTLNIIIHCLVKIGQCGEAIEL 173
Query: 119 LSFMNKK--GYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLF 176
+ M ++ P VV++T++M +Y G+ +N +AIF M + G +P+ + Y +L +
Sbjct: 174 FNSMRERRTKCPPDVVTYTSIMHSYCIYGQVENCKAIFDLMVAEGVKPNIVAYNSLLGAY 233
Query: 177 VEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQ 236
+EA +F + +K+ L+PD + ++ Y ++ EKAR++F M + +
Sbjct: 234 ASRGMHREALAIFNLI---KKNGLRPDIVSYTSLLNAYGRSAQPEKAREVFNKMKKNSCK 290
Query: 237 QSTVTYNSLMSFETN---YKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAV 293
+ V+YN+L+ + KE + +M++ G+QPDVVS + L+ A G+ R+ +
Sbjct: 291 PNKVSYNALIDAYGSAGMLKEAVGLLHEMEKDGIQPDVVSISTLLAACGRCRQITRIETI 350
Query: 294 FEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVN 353
E G+ AYN + ++ G ++A ++ MR PD +Y ++S
Sbjct: 351 LEAARSRGIDLNTVAYNSGIKSYLSFGDYEKALELYTSMRESNVKPDAVTYNILISGSSK 410
Query: 354 -------------------ASDMEG----AEKFFRRLKQDGFVPNVITYGTLIKGYAKVN 390
+S EG AE F +K+ G P+V+TY TLI+ Y
Sbjct: 411 LGKYTESLRFFEDMVDSKVSSTKEGKLSEAESTFSSMKKSGCFPDVLTYTTLIQAYNAGG 470
Query: 391 NLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQK--- 447
++ +++ +M VNGI P+ I +++M+A+ K + + + + M+ P +QK
Sbjct: 471 GWKRAWDLFKEMEVNGIPPDAIICSSLMEAFNKGGEPERVLQLMEFMKKKSIPLNQKSYF 530
Query: 448 ---AKNILLSLAKTADERNE------ANELLGNFNHPNNEPGING 483
A ++ KTA E E ++ +G NH N G G
Sbjct: 531 EIIASCTMIRDWKTASEMIEYLDSSLSSISVGTLNHVLNFLGKCG 575
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 83/323 (25%), Positives = 156/323 (48%), Gaps = 8/323 (2%)
Query: 137 LMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEE 196
++ Y R + A +F MQ +P A Y ++ A +++ A + +L
Sbjct: 17 MIRLYARHNQVDQARGLFFEMQEWRCKPDADIYNSLIHAHSRAGQWRWAINIMEDML--- 73
Query: 197 KSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVS 256
++ + P + ++ +I AG ++KA +L M E GV VT+N ++S N + S
Sbjct: 74 RAAIPPTRTTYNNVINACGAAGNWKKALELCKKMTENGVGPDLVTHNIVLSALKNGAQYS 133
Query: 257 KI---YDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVR--PTHKAYNI 311
K ++ M+ A + D + ++I+ K + EA+ +F M + + P Y
Sbjct: 134 KAISYFEIMKGANVTSDTFTLNIIIHCLVKIGQCGEAIELFNSMRERRTKCPPDVVTYTS 193
Query: 312 LLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDG 371
++ ++ I G V+ + +F M + P+I +Y ++L AY + A F +K++G
Sbjct: 194 IMHSYCIYGQVENCKAIFDLMVAEGVKPNIVAYNSLLGAYASRGMHREALAIFNLIKKNG 253
Query: 372 FVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAV 431
P++++Y +L+ Y + EK E+++KM+ N KPN+ + ++DAYG AV
Sbjct: 254 LRPDIVSYTSLLNAYGRSAQPEKAREVFNKMKKNSCKPNKVSYNALIDAYGSAGMLKEAV 313
Query: 432 VWYKEMESCGFPPDQKAKNILLS 454
EME G PD + + LL+
Sbjct: 314 GLLHEMEKDGIQPDVVSISTLLA 336
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 73/322 (22%), Positives = 163/322 (50%), Gaps = 8/322 (2%)
Query: 169 YQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFA 228
Y ++++L+ N+ +A +F + ++ KPD +++ +I+ + +AG + A +
Sbjct: 14 YGMMIRLYARHNQVDQARGLFFEM---QEWRCKPDADIYNSLIHAHSRAGQWRWAINIME 70
Query: 229 LMAERGVQQSTVTYNSLMSF---ETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKAR 285
M + + TYN++++ N+K+ ++ +M G+ PD+V++ ++++A
Sbjct: 71 DMLRAAIPPTRTTYNNVINACGAAGNWKKALELCKKMTENGVGPDLVTHNIVLSALKNGA 130
Query: 286 REEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMR--RDRCSPDICS 343
+ +A++ FE M A V NI++ G +A +F MR R +C PD+ +
Sbjct: 131 QYSKAISYFEIMKGANVTSDTFTLNIIIHCLVKIGQCGEAIELFNSMRERRTKCPPDVVT 190
Query: 344 YTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMR 403
YT+++ +Y +E + F + +G PN++ Y +L+ YA + + I++ ++
Sbjct: 191 YTSIMHSYCIYGQVENCKAIFDLMVAEGVKPNIVAYNSLLGAYASRGMHREALAIFNLIK 250
Query: 404 VNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERN 463
NG++P+ +T++++AYG++ + A + +M+ P++ + N L+ +A
Sbjct: 251 KNGLRPDIVSYTSLLNAYGRSAQPEKAREVFNKMKKNSCKPNKVSYNALIDAYGSAGMLK 310
Query: 464 EANELLGNFNHPNNEPGINGLS 485
EA LL +P + +S
Sbjct: 311 EAVGLLHEMEKDGIQPDVVSIS 332
>gi|297741319|emb|CBI32450.3| unnamed protein product [Vitis vinifera]
Length = 851
Score = 172 bits (437), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 105/386 (27%), Positives = 192/386 (49%), Gaps = 8/386 (2%)
Query: 88 IQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRY 147
I+S N + +LI + G+ K M + G P+VV++ L++AY + GR
Sbjct: 2 IRSRVSPNVYTYNILIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLIDAYCKMGRI 61
Query: 148 KNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMF 207
A + + M S G +P+ ++Y +I+ KEA E+ L + PD+ +
Sbjct: 62 DEAFGLLKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEI---LEEMGYKGFTPDEVTY 118
Query: 208 HMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSL---MSFETNYKEVSKIYDQMQR 264
+ ++ Y K G + +A + A M GV S VTY +L M N + +DQM+
Sbjct: 119 NTLLNGYCKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRI 178
Query: 265 AGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQ 324
GL+P+ +Y LI+ + + EA + EM ++G P+ YN + + +++
Sbjct: 179 RGLRPNERTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLERMEE 238
Query: 325 ARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIK 384
A V + M +PD+ SY+T++S + +++ A + + + + G P+ +TY +LI+
Sbjct: 239 ALGVVQEMVEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEKGVSPDAVTYSSLIQ 298
Query: 385 GYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPP 444
G ++ L + ++ +M G+ P++ +TT+++AY D + A+ + EM GF P
Sbjct: 299 GLCEMRRLTEACDLSQEMLDMGLPPDEFTYTTLINAYCVEGDLNKALHLHDEMIHKGFLP 358
Query: 445 DQKAKNILLS-LAKTADERNEANELL 469
D ++L++ L K A R EA LL
Sbjct: 359 DAVTYSVLINGLNKQARTR-EAKRLL 383
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 83/350 (23%), Positives = 168/350 (48%), Gaps = 6/350 (1%)
Query: 122 MNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANK 181
M + +P+V ++ L+ + G + F M+ +G P+ +TY ++ + + +
Sbjct: 1 MIRSRVSPNVYTYNILIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLIDAYCKMGR 60
Query: 182 FKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVT 241
EA F L ++P+ ++++I + G ++A ++ M +G VT
Sbjct: 61 IDEA---FGLLKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVT 117
Query: 242 YNSLMSF---ETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEML 298
YN+L++ E N+ + I+ +M R G+ P VV+Y LIN+ KAR A+ F++M
Sbjct: 118 YNTLLNGYCKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMR 177
Query: 299 DAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDME 358
G+RP + Y L+D F+ G++++A + M SP + +Y + + ME
Sbjct: 178 IRGLRPNERTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLERME 237
Query: 359 GAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIM 418
A + + + G P+V++Y T+I G+ + L++ ++ +M G+ P+ +++++
Sbjct: 238 EALGVVQEMVEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEKGVSPDAVTYSSLI 297
Query: 419 DAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANEL 468
+ + A +EM G PPD+ L++ + N+A L
Sbjct: 298 QGLCEMRRLTEACDLSQEMLDMGLPPDEFTYTTLINAYCVEGDLNKALHL 347
Score = 141 bits (356), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 110/459 (23%), Positives = 214/459 (46%), Gaps = 33/459 (7%)
Query: 35 MNQIEEVGSAVAVLRSERTRG-QP--LPKDLVLGTLVRLKQLKK-WNVVSEVLEWLRIQS 90
M +I+E A +L+S ++G QP + ++++ L R +K+ W E+LE + +
Sbjct: 58 MGRIDE---AFGLLKSMSSKGMQPNLISYNVIINGLCREGSMKEAW----EILEEMGYKG 110
Query: 91 WWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNA 150
+ +E+ + L+ Y K+G+F++A + + M + G +PSVV++TAL+ + + A
Sbjct: 111 FTP-DEVTYNTLLNGYCKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRA 169
Query: 151 EAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMM 210
F +M+ G RP+ TY ++ F EA + L + +S P ++
Sbjct: 170 MEFFDQMRIRGLRPNERTYTTLIDGFSRQGLLNEA---YRILNEMTESGFSPSVVTYNAF 226
Query: 211 IYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSKIYD---QMQRAGL 267
I+ + E+A + M E+G+ V+Y++++S E+ + + +M G+
Sbjct: 227 IHGHCVLERMEEALGVVQEMVEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEKGV 286
Query: 268 QPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQART 327
PD V+Y+ LI + RR EA + +EMLD G+ P Y L++A+ + G +++A
Sbjct: 287 SPDAVTYSSLIQGLCEMRRLTEACDLSQEMLDMGLPPDEFTYTTLINAYCVEGDLNKALH 346
Query: 328 VFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLI---- 383
+ M PD +Y+ +++ + A++ +L + VP+ +TY TLI
Sbjct: 347 LHDEMIHKGFLPDAVTYSVLINGLNKQARTREAKRLLFKLIYEESVPSDVTYDTLIENCS 406
Query: 384 -----------KGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVV 432
KG+ + + +++ M KP + ++ I+ + + + A
Sbjct: 407 NIEFKSVVALIKGFCMKGLMHEADRVFESMVERNHKPGEAVYNVIIHGHCRGGNLPKAFN 466
Query: 433 WYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGN 471
YKEM GF P L+ E +E++G+
Sbjct: 467 LYKEMIHSGFVPHTVTVITLIKALFKEGMNEEMSEVIGD 505
>gi|356508736|ref|XP_003523110.1| PREDICTED: pentatricopeptide repeat-containing protein At5g42310,
mitochondrial-like [Glycine max]
Length = 680
Score = 172 bits (437), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 111/387 (28%), Positives = 190/387 (49%), Gaps = 14/387 (3%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
+I + K GD +A + L+ G P + A++ A G GR AEA+F ++ +G
Sbjct: 247 IIVGFSKAGDPTRAMRFLAMAQSNGLNPKPSTLVAVILALGNSGRTHEAEALFEEIRENG 306
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
P Y +LK +V K+AE V + EK+ +KPD++ + ++I +Y AG +E
Sbjct: 307 LEPRTRAYNALLKGYVRTGSLKDAEFVVSEM---EKAGVKPDEQTYSLLIDVYAHAGRWE 363
Query: 222 KARKLFALMAERGVQQSTVTYNSLMSFETNYKEVS------KIYDQMQRAGLQPDVVSYA 275
AR + M VQ ++ ++ +++ NY++ ++ M+ +G+QPD Y
Sbjct: 364 SARIVLKEMEASNVQPNSYVFSRILA---NYRDKGEWQKSFQVLKDMKSSGVQPDRHFYN 420
Query: 276 LLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRD 335
++I+ +GK + A+A FE ML G+ P +N L+D SG D A +F M++
Sbjct: 421 VMIDTFGKYNCLDHAMATFERMLSEGIPPDIVTWNTLIDCHCKSGRHDMAEELFSEMQQR 480
Query: 336 RCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKM 395
SP I +Y M+++ E F +++ G PN ITY TL+ Y K
Sbjct: 481 GYSPCITTYNIMINSMGEQQRWEQVTAFLSKMQSQGLQPNSITYTTLVDVYGKSGRFSDA 540
Query: 396 MEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSL 455
+E + ++ G KP T++ +++AY + + AV ++ M + G P A N L++
Sbjct: 541 IECLEVLKSTGFKPTSTMYNALINAYAQRGLSELAVNAFRLMTTEGLTPSLLALNSLIN- 599
Query: 456 AKTADERN-EANELLGNFNHPNNEPGI 481
A D R+ EA +L N EP +
Sbjct: 600 AFGEDRRDAEAFAVLQYMKENNIEPDV 626
Score = 155 bits (392), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 89/356 (25%), Positives = 175/356 (49%), Gaps = 6/356 (1%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
L+ Y + G AE V+S M K G P +++ L++ Y GR+++A + + M++S
Sbjct: 317 LLKGYVRTGSLKDAEFVVSEMEKAGVKPDEQTYSLLIDVYAHAGRWESARIVLKEMEASN 376
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
+P++ + IL + + +++++ F L D + S ++PD+ +++MI + K +
Sbjct: 377 VQPNSYVFSRILANYRDKGEWQKS---FQVLKDMKSSGVQPDRHFYNVMIDTFGKYNCLD 433
Query: 222 KARKLFALMAERGVQQSTVTYNSLMSFETN---YKEVSKIYDQMQRAGLQPDVVSYALLI 278
A F M G+ VT+N+L+ + +++ +MQ+ G P + +Y ++I
Sbjct: 434 HAMATFERMLSEGIPPDIVTWNTLIDCHCKSGRHDMAEELFSEMQQRGYSPCITTYNIMI 493
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCS 338
N+ G+ +R E+ A +M G++P Y L+D + SG A + ++
Sbjct: 494 NSMGEQQRWEQVTAFLSKMQSQGLQPNSITYTTLVDVYGKSGRFSDAIECLEVLKSTGFK 553
Query: 339 PDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEI 398
P Y +++AY E A FR + +G P+++ +LI + + + +
Sbjct: 554 PTSTMYNALINAYAQRGLSELAVNAFRLMTTEGLTPSLLALNSLINAFGEDRRDAEAFAV 613
Query: 399 YDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLS 454
M+ N I+P+ +TT+M A + + F Y+EM + G PD+KA+ +L S
Sbjct: 614 LQYMKENNIEPDVVTYTTLMKALIRVEKFQKVPAVYEEMVASGCTPDRKARAMLRS 669
Score = 135 bits (339), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 102/444 (22%), Positives = 189/444 (42%), Gaps = 77/444 (17%)
Query: 82 VLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAY 141
V+ WL+ + E+ + +LI A G+ +A F+ + + +++ AL+ A
Sbjct: 125 VVSWLQKHNLCFSYELLYSILINALGRSEKLYEA-----FLLSQRQVLTPLTYNALIGAC 179
Query: 142 GRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANK---------FKEAE----EV 188
R G + A + +M+ G +P + Y I++ +NK + E E E+
Sbjct: 180 ARNGDVEKALNLMSKMRRDGYQPDFVNYSSIIQYLTRSNKIDSPILQKLYAEIETDKIEI 239
Query: 189 FMTLLDE---------------------EKSPLKPDQKMFHMMIYMYKKAGGYEKARKLF 227
L+++ + + L P +I +G +A LF
Sbjct: 240 DGHLMNDIIVGFSKAGDPTRAMRFLAMAQSNGLNPKPSTLVAVILALGNSGRTHEAEALF 299
Query: 228 ALMAERGVQQSTVTYNSLMSFET---NYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKA 284
+ E G++ T YN+L+ + K+ + +M++AG++PD +Y+LLI+ Y A
Sbjct: 300 EEIRENGLEPRTRAYNALLKGYVRTGSLKDAEFVVSEMEKAGVKPDEQTYSLLIDVYAHA 359
Query: 285 RREEEALAVFEE-----------------------------------MLDAGVRPTHKAY 309
R E A V +E M +GV+P Y
Sbjct: 360 GRWESARIVLKEMEASNVQPNSYVFSRILANYRDKGEWQKSFQVLKDMKSSGVQPDRHFY 419
Query: 310 NILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQ 369
N+++D F +D A F+ M + PDI ++ T++ + + + AE+ F ++Q
Sbjct: 420 NVMIDTFGKYNCLDHAMATFERMLSEGIPPDIVTWNTLIDCHCKSGRHDMAEELFSEMQQ 479
Query: 370 DGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDS 429
G+ P + TY +I + E++ KM+ G++PN +TT++D YGK+ F
Sbjct: 480 RGYSPCITTYNIMINSMGEQQRWEQVTAFLSKMQSQGLQPNSITYTTLVDVYGKSGRFSD 539
Query: 430 AVVWYKEMESCGFPPDQKAKNILL 453
A+ + ++S GF P N L+
Sbjct: 540 AIECLEVLKSTGFKPTSTMYNALI 563
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 79/322 (24%), Positives = 150/322 (46%), Gaps = 45/322 (13%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N F ++ Y +G++ K+ +VL M G P + +++ +G+ +A A F
Sbjct: 380 NSYVFSRILANYRDKGEWQKSFQVLKDMKSSGVQPDRHFYNVMIDTFGKYNCLDHAMATF 439
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
RM S G P +T+ ++ ++ + AEE
Sbjct: 440 ERMLSEGIPPDIVTWNTLIDCHCKSGRHDMAEE--------------------------- 472
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSL---MSFETNYKEVSKIYDQMQRAGLQPDV 271
LF+ M +RG TYN + M + +++V+ +MQ GLQP+
Sbjct: 473 -----------LFSEMQQRGYSPCITTYNIMINSMGEQQRWEQVTAFLSKMQSQGLQPNS 521
Query: 272 VSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKC 331
++Y L++ YGK+ R +A+ E + G +PT YN L++A+A G+ + A F+
Sbjct: 522 ITYTTLVDVYGKSGRFSDAIECLEVLKSTGFKPTSTMYNALINAYAQRGLSELAVNAFRL 581
Query: 332 MRRDRCSPDICSYTTMLSAYVNASDMEGAEKF--FRRLKQDGFVPNVITYGTLIKGYAKV 389
M + +P + + ++++A+ D AE F + +K++ P+V+TY TL+K +V
Sbjct: 582 MTTEGLTPSLLALNSLINAF--GEDRRDAEAFAVLQYMKENNIEPDVVTYTTLMKALIRV 639
Query: 390 NNLEKMMEIYDKMRVNGIKPNQ 411
+K+ +Y++M +G P++
Sbjct: 640 EKFQKVPAVYEEMVASGCTPDR 661
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 116/218 (53%), Gaps = 6/218 (2%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
LI + K G + AE++ S M ++GY+P + ++ ++ + G R++ A +MQS G
Sbjct: 457 LIDCHCKSGRHDMAEELFSEMQQRGYSPCITTYNIMINSMGEQQRWEQVTAFLSKMQSQG 516
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
+P+++TY ++ ++ ++ +F +A E L + + KP M++ +I Y + G E
Sbjct: 517 LQPNSITYTTLVDVYGKSGRFSDAIECLEVL---KSTGFKPTSTMYNALINAYAQRGLSE 573
Query: 222 KARKLFALMAERGVQQSTVTYNSLM-SFETNYK--EVSKIYDQMQRAGLQPDVVSYALLI 278
A F LM G+ S + NSL+ +F + + E + M+ ++PDVV+Y L+
Sbjct: 574 LAVNAFRLMTTEGLTPSLLALNSLINAFGEDRRDAEAFAVLQYMKENNIEPDVVTYTTLM 633
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAF 316
A + + ++ AV+EEM+ +G P KA +L A
Sbjct: 634 KALIRVEKFQKVPAVYEEMVASGCTPDRKARAMLRSAL 671
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 59/277 (21%), Positives = 131/277 (47%), Gaps = 7/277 (2%)
Query: 218 GGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSK---IYDQMQRAGLQPDVVSY 274
G EK + F L+++R V + +TYN+L+ +V K + +M+R G QPD V+Y
Sbjct: 150 GRSEKLYEAF-LLSQRQVL-TPLTYNALIGACARNGDVEKALNLMSKMRRDGYQPDFVNY 207
Query: 275 ALLINAYGKARREEEAL--AVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCM 332
+ +I ++ + + + ++ E+ + N ++ F+ +G +A
Sbjct: 208 SSIIQYLTRSNKIDSPILQKLYAEIETDKIEIDGHLMNDIIVGFSKAGDPTRAMRFLAMA 267
Query: 333 RRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNL 392
+ + +P + ++ A N+ AE F ++++G P Y L+KGY + +L
Sbjct: 268 QSNGLNPKPSTLVAVILALGNSGRTHEAEALFEEIRENGLEPRTRAYNALLKGYVRTGSL 327
Query: 393 EKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNIL 452
+ + +M G+KP++ ++ ++D Y ++SA + KEME+ P+ + +
Sbjct: 328 KDAEFVVSEMEKAGVKPDEQTYSLLIDVYAHAGRWESARIVLKEMEASNVQPNSYVFSRI 387
Query: 453 LSLAKTADERNEANELLGNFNHPNNEPGINGLSISVD 489
L+ + E ++ ++L + +P + ++ +D
Sbjct: 388 LANYRDKGEWQKSFQVLKDMKSSGVQPDRHFYNVMID 424
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 49/210 (23%), Positives = 86/210 (40%), Gaps = 42/210 (20%)
Query: 74 KKWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVS 133
++W V+ L ++ Q N + + L+ YGK G F+ A + L + G+ P+
Sbjct: 500 QRWEQVTAFLSKMQSQGLQP-NSITYTTLVDVYGKSGRFSDAIECLEVLKSTGFKPTSTM 558
Query: 134 HTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLL 193
+ AL+ AY + G + A FR M + G PS L ++ F E +
Sbjct: 559 YNALINAYAQRGLSELAVNAFRLMTTEGLTPSLLALNSLINAFGEDRR------------ 606
Query: 194 DEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFET--- 250
D + F ++ Y M E ++ VTY +LM
Sbjct: 607 ---------DAEAFAVLQY-----------------MKENNIEPDVVTYTTLMKALIRVE 640
Query: 251 NYKEVSKIYDQMQRAGLQPDVVSYALLINA 280
+++V +Y++M +G PD + A+L +A
Sbjct: 641 KFQKVPAVYEEMVASGCTPDRKARAMLRSA 670
>gi|297606902|ref|NP_001059180.2| Os07g0213300 [Oryza sativa Japonica Group]
gi|215767816|dbj|BAH00045.1| unnamed protein product [Oryza sativa Japonica Group]
gi|255677604|dbj|BAF21094.2| Os07g0213300 [Oryza sativa Japonica Group]
Length = 677
Score = 172 bits (436), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 94/339 (27%), Positives = 174/339 (51%), Gaps = 4/339 (1%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
+I A G G++ KA ++ M + G P +V+H ++ A G +Y A + F M+ +
Sbjct: 87 VINACGAAGNWKKALELCKKMTENGVGPDLVTHNIVLSALKNGAQYSKAISYFEIMKGAN 146
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
T II+ V+ + EA E+F ++ E ++ PD + +++ Y G E
Sbjct: 147 VTSDTFTLNIIIHCLVKIGQCGEAIELFNSM-RERRTKCPPDVVTYTSIMHSYCIYGQVE 205
Query: 222 KARKLFALMAERGVQQSTVTYNSLMSFETN---YKEVSKIYDQMQRAGLQPDVVSYALLI 278
+ +F LM GV+ + V YNSL+ + ++E I++ +++ GL+PD+VSY L+
Sbjct: 206 NCKAIFDLMVAEGVKPNIVAYNSLLGAYASRGMHREALAIFNLIKKNGLRPDIVSYTSLL 265
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCS 338
NAYG++ + E+A VF +M +P +YN L+DA+ +GM+ +A + M +D
Sbjct: 266 NAYGRSAQPEKAREVFNKMKKNSCKPNKVSYNALIDAYGSAGMLKEAVGLLHEMEKDGIQ 325
Query: 339 PDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEI 398
PD+ S +T+L+A + E + G N + Y + IK Y + EK +E+
Sbjct: 326 PDVVSISTLLAACGRCRQITRIETILEAARSRGIDLNTVAYNSGIKSYLSFGDYEKALEL 385
Query: 399 YDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEM 437
Y MR + +KP+ + ++ K + ++ ++++M
Sbjct: 386 YTSMRESNVKPDAVTYNILISGSSKLGKYTESLRFFEDM 424
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 101/404 (25%), Positives = 202/404 (50%), Gaps = 19/404 (4%)
Query: 37 QIEEVGSAVAVLRSERTRGQPLPKDLVLGTLVRLKQLKKWNVVSEVLEW-----LRIQSW 91
+I + G A+ + S R R P D+V T + + + + +V L +
Sbjct: 163 KIGQCGEAIELFNSMRERRTKCPPDVVTYTSI----MHSYCIYGQVENCKAIFDLMVAEG 218
Query: 92 WDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAE 151
N + + L+ AY +G +A + + + K G P +VS+T+L+ AYGR + + A
Sbjct: 219 VKPNIVAYNSLLGAYASRGMHREALAIFNLIKKNGLRPDIVSYTSLLNAYGRSAQPEKAR 278
Query: 152 AIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDE-EKSPLKPDQKMFHMM 210
+F +M+ + +P+ ++Y ++ + A KEA + LL E EK ++PD +
Sbjct: 279 EVFNKMKKNSCKPNKVSYNALIDAYGSAGMLKEA----VGLLHEMEKDGIQPDVVSISTL 334
Query: 211 IYMYKKAGGYEKARKLFALMAERGVQQSTVTYNS----LMSFETNYKEVSKIYDQMQRAG 266
+ + + + RG+ +TV YNS +SF +Y++ ++Y M+ +
Sbjct: 335 LAACGRCRQITRIETILEAARSRGIDLNTVAYNSGIKSYLSF-GDYEKALELYTSMRESN 393
Query: 267 LQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQAR 326
++PD V+Y +LI+ K + E+L FE+M+D+ V T + Y+ L+ ++ G + +A
Sbjct: 394 VKPDAVTYNILISGSSKLGKYTESLRFFEDMVDSKVSSTKEVYSSLIYSYIKQGKLSEAE 453
Query: 327 TVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGY 386
+ F M++ C PD+ +YTT++ AY + A F+ ++ +G P+ I +L++ +
Sbjct: 454 STFSSMKKSGCFPDVLTYTTLIQAYNAGGGWKRAWDLFKEMEVNGIPPDAIICSSLMEAF 513
Query: 387 AKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSA 430
K E+++++ + M+ I NQ + I+ + +D+ +A
Sbjct: 514 NKGGEPERVLQLMEFMKKKSIPLNQKSYFEIIASCTMIRDWKTA 557
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 95/358 (26%), Positives = 174/358 (48%), Gaps = 8/358 (2%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
LI A+ + G + A ++ M + P+ ++ ++ A G G +K A + ++M +G
Sbjct: 52 LIHAHSRAGQWRWAINIMEDMLRAAIPPTRTTYNNVINACGAAGNWKKALELCKKMTENG 111
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
P +T+ I+L ++ +A F + + + + D +++I+ K G
Sbjct: 112 VGPDLVTHNIVLSALKNGAQYSKAISYFEIM---KGANVTSDTFTLNIIIHCLVKIGQCG 168
Query: 222 KARKLFALMAERGVQQS--TVTYNSLMSFETNYKEVSK---IYDQMQRAGLQPDVVSYAL 276
+A +LF M ER + VTY S+M Y +V I+D M G++P++V+Y
Sbjct: 169 EAIELFNSMRERRTKCPPDVVTYTSIMHSYCIYGQVENCKAIFDLMVAEGVKPNIVAYNS 228
Query: 277 LINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDR 336
L+ AY EALA+F + G+RP +Y LL+A+ S ++AR VF M+++
Sbjct: 229 LLGAYASRGMHREALAIFNLIKKNGLRPDIVSYTSLLNAYGRSAQPEKAREVFNKMKKNS 288
Query: 337 CSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMM 396
C P+ SY ++ AY +A ++ A +++DG P+V++ TL+ + + ++
Sbjct: 289 CKPNKVSYNALIDAYGSAGMLKEAVGLLHEMEKDGIQPDVVSISTLLAACGRCRQITRIE 348
Query: 397 EIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLS 454
I + R GI N + + + +Y D++ A+ Y M PD NIL+S
Sbjct: 349 TILEAARSRGIDLNTVAYNSGIKSYLSFGDYEKALELYTSMRESNVKPDAVTYNILIS 406
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 83/323 (25%), Positives = 156/323 (48%), Gaps = 8/323 (2%)
Query: 137 LMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEE 196
++ Y R + A +F MQ +P A Y ++ A +++ A + +L
Sbjct: 17 MIRLYARHNQVDQARGLFFEMQEWRCKPDADIYNSLIHAHSRAGQWRWAINIMEDML--- 73
Query: 197 KSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVS 256
++ + P + ++ +I AG ++KA +L M E GV VT+N ++S N + S
Sbjct: 74 RAAIPPTRTTYNNVINACGAAGNWKKALELCKKMTENGVGPDLVTHNIVLSALKNGAQYS 133
Query: 257 K---IYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVR--PTHKAYNI 311
K ++ M+ A + D + ++I+ K + EA+ +F M + + P Y
Sbjct: 134 KAISYFEIMKGANVTSDTFTLNIIIHCLVKIGQCGEAIELFNSMRERRTKCPPDVVTYTS 193
Query: 312 LLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDG 371
++ ++ I G V+ + +F M + P+I +Y ++L AY + A F +K++G
Sbjct: 194 IMHSYCIYGQVENCKAIFDLMVAEGVKPNIVAYNSLLGAYASRGMHREALAIFNLIKKNG 253
Query: 372 FVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAV 431
P++++Y +L+ Y + EK E+++KM+ N KPN+ + ++DAYG AV
Sbjct: 254 LRPDIVSYTSLLNAYGRSAQPEKAREVFNKMKKNSCKPNKVSYNALIDAYGSAGMLKEAV 313
Query: 432 VWYKEMESCGFPPDQKAKNILLS 454
EME G PD + + LL+
Sbjct: 314 GLLHEMEKDGIQPDVVSISTLLA 336
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 73/322 (22%), Positives = 163/322 (50%), Gaps = 8/322 (2%)
Query: 169 YQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFA 228
Y ++++L+ N+ +A +F + ++ KPD +++ +I+ + +AG + A +
Sbjct: 14 YGMMIRLYARHNQVDQARGLFFEM---QEWRCKPDADIYNSLIHAHSRAGQWRWAINIME 70
Query: 229 LMAERGVQQSTVTYNSLMSF---ETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKAR 285
M + + TYN++++ N+K+ ++ +M G+ PD+V++ ++++A
Sbjct: 71 DMLRAAIPPTRTTYNNVINACGAAGNWKKALELCKKMTENGVGPDLVTHNIVLSALKNGA 130
Query: 286 REEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMR--RDRCSPDICS 343
+ +A++ FE M A V NI++ G +A +F MR R +C PD+ +
Sbjct: 131 QYSKAISYFEIMKGANVTSDTFTLNIIIHCLVKIGQCGEAIELFNSMRERRTKCPPDVVT 190
Query: 344 YTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMR 403
YT+++ +Y +E + F + +G PN++ Y +L+ YA + + I++ ++
Sbjct: 191 YTSIMHSYCIYGQVENCKAIFDLMVAEGVKPNIVAYNSLLGAYASRGMHREALAIFNLIK 250
Query: 404 VNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERN 463
NG++P+ +T++++AYG++ + A + +M+ P++ + N L+ +A
Sbjct: 251 KNGLRPDIVSYTSLLNAYGRSAQPEKAREVFNKMKKNSCKPNKVSYNALIDAYGSAGMLK 310
Query: 464 EANELLGNFNHPNNEPGINGLS 485
EA LL +P + +S
Sbjct: 311 EAVGLLHEMEKDGIQPDVVSIS 332
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 85/356 (23%), Positives = 161/356 (45%), Gaps = 12/356 (3%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N++ + LI AYG G +A +L M K G P VVS + L+ A GR + E I
Sbjct: 292 NKVSYNALIDAYGSAGMLKEAVGLLHEMEKDGIQPDVVSISTLLAACGRCRQITRIETIL 351
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
+S G + + Y +K ++ +++A E++ ++ +S +KPD ++++I
Sbjct: 352 EAARSRGIDLNTVAYNSGIKSYLSFGDYEKALELYTSM---RESNVKPDAVTYNILISGS 408
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSLM-SF--ETNYKEVSKIYDQMQRAGLQPDV 271
K G Y ++ + F M + V + Y+SL+ S+ + E + M+++G PDV
Sbjct: 409 SKLGKYTESLRFFEDMVDSKVSSTKEVYSSLIYSYIKQGKLSEAESTFSSMKKSGCFPDV 468
Query: 272 VSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKC 331
++Y LI AY + A +F+EM G+ P + L++AF G ++ + +
Sbjct: 469 LTYTTLIQAYNAGGGWKRAWDLFKEMEVNGIPPDAIICSSLMEAFNKGGEPERVLQLMEF 528
Query: 332 MRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNN 391
M++ + SY ++++ D + A + L +V T ++ K
Sbjct: 529 MKKKSIPLNQKSYFEIIASCTMIRDWKTASEMIEYLDSSLSSISVGTLNHVLNFLGKCGK 588
Query: 392 LEKMMEIYDKMRVNGIKPNQTIFTTIMD---AYGKNKDFDSAVVWYKEMESCGFPP 444
E MM+++ KM + + + ++ GK + + + W ME G P
Sbjct: 589 TENMMKLFYKMVTSCSTVGLSTYAVVLRNLLVVGKWRKYIEVLQW---MEDSGVHP 641
>gi|449455399|ref|XP_004145440.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g35130-like [Cucumis sativus]
Length = 576
Score = 172 bits (436), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 103/375 (27%), Positives = 188/375 (50%), Gaps = 8/375 (2%)
Query: 99 FLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQ 158
+ +L+ AY K G KAE V + M K G +PS + + A ++ +GG A IF RM+
Sbjct: 193 YALLLKAYCKSGLLEKAEAVFAEMRKYGLSPSAIVYNAYIDGLVKGGNNVKAVEIFHRMK 252
Query: 159 SSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSP-LKPDQKMFHMMIYMYKKA 217
G +P+ TY +++ ++ + +K A+ +F DE ++ KP+ F ++ +
Sbjct: 253 RDGCQPTTDTYTMLINVYGKESKSHMAQNIF----DEMRTQRCKPNICTFTALVNALARE 308
Query: 218 GGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYK---EVSKIYDQMQRAGLQPDVVSY 274
G EKA ++F M E G + YN+LM + ++I+ MQ G +PD SY
Sbjct: 309 GLCEKAEEIFEQMQEAGYEPDVYAYNALMESYSRAGFPYGAAEIFSLMQHMGCEPDRASY 368
Query: 275 ALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRR 334
++++AYG+A E+A AVFEEM G+ PT K++ +LL A++ +G V + + M +
Sbjct: 369 NIMVDAYGRAGLHEDAQAVFEEMKRIGITPTMKSHMLLLSAYSSAGNVAKCEDIIGQMHK 428
Query: 335 DRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEK 394
PD +ML+ Y E F +++ ++ TY LI Y + +E+
Sbjct: 429 SGLKPDTFVMNSMLNLYGRLGQFGKMEDLFSTMQKGPCRADISTYNILINVYGRAGFVER 488
Query: 395 MMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLS 454
M E++ + ++P+ +T+ + AY + K + + +++M G PD +LLS
Sbjct: 489 MEELFQLLPAKNLEPDVVTWTSRIGAYSRKKLYKRCLELFEKMIDAGCYPDGGTAKVLLS 548
Query: 455 LAKTADERNEANELL 469
+ ++ + ++
Sbjct: 549 ACSSEEQIEQVTNVV 563
Score = 162 bits (410), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 109/424 (25%), Positives = 192/424 (45%), Gaps = 41/424 (9%)
Query: 61 DLVLGTLVRLKQLKKWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLS 120
D ++ V+L+ KKW + + EW+
Sbjct: 120 DDIISVAVQLRLNKKWGPIILICEWI---------------------------------- 145
Query: 121 FMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEAN 180
MNK + P V+ + LM+AYG+ YK+ E+ + + S P+ TY ++LK + ++
Sbjct: 146 -MNKSTFRPDVIVYNLLMDAYGQRSLYKDVESTYLELLESHCIPTEDTYALLLKAYCKSG 204
Query: 181 KFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTV 240
++AE VF + K L P +++ I K G KA ++F M G Q +T
Sbjct: 205 LLEKAEAVFAEM---RKYGLSPSAIVYNAYIDGLVKGGNNVKAVEIFHRMKRDGCQPTTD 261
Query: 241 TYNSLMSF---ETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEM 297
TY L++ E+ I+D+M+ +P++ ++ L+NA + E+A +FE+M
Sbjct: 262 TYTMLINVYGKESKSHMAQNIFDEMRTQRCKPNICTFTALVNALAREGLCEKAEEIFEQM 321
Query: 298 LDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDM 357
+AG P AYN L+++++ +G A +F M+ C PD SY M+ AY A
Sbjct: 322 QEAGYEPDVYAYNALMESYSRAGFPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLH 381
Query: 358 EGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTI 417
E A+ F +K+ G P + ++ L+ Y+ N+ K +I +M +G+KP+ + ++
Sbjct: 382 EDAQAVFEEMKRIGITPTMKSHMLLLSAYSSAGNVAKCEDIIGQMHKSGLKPDTFVMNSM 441
Query: 418 MDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNN 477
++ YG+ F + M+ D NIL+++ A EL N
Sbjct: 442 LNLYGRLGQFGKMEDLFSTMQKGPCRADISTYNILINVYGRAGFVERMEELFQLLPAKNL 501
Query: 478 EPGI 481
EP +
Sbjct: 502 EPDV 505
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 75/308 (24%), Positives = 147/308 (47%), Gaps = 6/308 (1%)
Query: 99 FLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQ 158
+ MLI YGK+ + A+ + M + P++ + TAL+ A R G + AE IF +MQ
Sbjct: 263 YTMLINVYGKESKSHMAQNIFDEMRTQRCKPNICTFTALVNALAREGLCEKAEEIFEQMQ 322
Query: 159 SSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAG 218
+G P Y +++ + A A E+F + + +PD+ +++M+ Y +AG
Sbjct: 323 EAGYEPDVYAYNALMESYSRAGFPYGAAEIFSLM---QHMGCEPDRASYNIMVDAYGRAG 379
Query: 219 GYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSKIYD---QMQRAGLQPDVVSYA 275
+E A+ +F M G+ + ++ L+S ++ V+K D QM ++GL+PD
Sbjct: 380 LHEDAQAVFEEMKRIGITPTMKSHMLLLSAYSSAGNVAKCEDIIGQMHKSGLKPDTFVMN 439
Query: 276 LLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRD 335
++N YG+ + + +F M R YNIL++ + +G V++ +F+ +
Sbjct: 440 SMLNLYGRLGQFGKMEDLFSTMQKGPCRADISTYNILINVYGRAGFVERMEELFQLLPAK 499
Query: 336 RCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKM 395
PD+ ++T+ + AY + + F ++ G P+ T L+ + +E++
Sbjct: 500 NLEPDVVTWTSRIGAYSRKKLYKRCLELFEKMIDAGCYPDGGTAKVLLSACSSEEQIEQV 559
Query: 396 MEIYDKMR 403
+ M
Sbjct: 560 TNVVRTMH 567
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 69/228 (30%), Positives = 111/228 (48%)
Query: 262 MQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGM 321
M ++ +PDV+ Y LL++AYG+ ++ + + E+L++ PT Y +LL A+ SG+
Sbjct: 146 MNKSTFRPDVIVYNLLMDAYGQRSLYKDVESTYLELLESHCIPTEDTYALLLKAYCKSGL 205
Query: 322 VDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGT 381
+++A VF MR+ SP Y + V + A + F R+K+DG P TY
Sbjct: 206 LEKAEAVFAEMRKYGLSPSAIVYNAYIDGLVKGGNNVKAVEIFHRMKRDGCQPTTDTYTM 265
Query: 382 LIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCG 441
LI Y K + I+D+MR KPN FT +++A + + A +++M+ G
Sbjct: 266 LINVYGKESKSHMAQNIFDEMRTQRCKPNICTFTALVNALAREGLCEKAEEIFEQMQEAG 325
Query: 442 FPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGINGLSISVD 489
+ PD A N L+ A A E+ H EP +I VD
Sbjct: 326 YEPDVYAYNALMESYSRAGFPYGAAEIFSLMQHMGCEPDRASYNIMVD 373
Score = 111 bits (278), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 76/276 (27%), Positives = 124/276 (44%), Gaps = 35/276 (12%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N F L+ A ++G KAE++ M + GY P V ++ ALME+Y R G A IF
Sbjct: 294 NICTFTALVNALAREGLCEKAEEIFEQMQEAGYEPDVYAYNALMESYSRAGFPYGAAEIF 353
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVF---------------MTLLDE---- 195
MQ G P +Y I++ + A ++A+ VF M LL
Sbjct: 354 SLMQHMGCEPDRASYNIMVDAYGRAGLHEDAQAVFEEMKRIGITPTMKSHMLLLSAYSSA 413
Query: 196 -------------EKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTY 242
KS LKPD + + M+ +Y + G + K LF+ M + + TY
Sbjct: 414 GNVAKCEDIIGQMHKSGLKPDTFVMNSMLNLYGRLGQFGKMEDLFSTMQKGPCRADISTY 473
Query: 243 NSLMSFETN---YKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLD 299
N L++ + + +++ + L+PDVV++ I AY + + + L +FE+M+D
Sbjct: 474 NILINVYGRAGFVERMEELFQLLPAKNLEPDVVTWTSRIGAYSRKKLYKRCLELFEKMID 533
Query: 300 AGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRD 335
AG P +LL A + ++Q V + M +D
Sbjct: 534 AGCYPDGGTAKVLLSACSSEEQIEQVTNVVRTMHKD 569
Score = 47.0 bits (110), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 47/100 (47%)
Query: 101 MLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSS 160
+LI YG+ G + E++ + K P VV+ T+ + AY R YK +F +M +
Sbjct: 475 ILINVYGRAGFVERMEELFQLLPAKNLEPDVVTWTSRIGAYSRKKLYKRCLELFEKMIDA 534
Query: 161 GPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPL 200
G P T +++L + ++ V T+ + K+ L
Sbjct: 535 GCYPDGGTAKVLLSACSSEEQIEQVTNVVRTMHKDLKTLL 574
>gi|242050640|ref|XP_002463064.1| hypothetical protein SORBIDRAFT_02g037020 [Sorghum bicolor]
gi|241926441|gb|EER99585.1| hypothetical protein SORBIDRAFT_02g037020 [Sorghum bicolor]
Length = 558
Score = 172 bits (436), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 114/451 (25%), Positives = 205/451 (45%), Gaps = 42/451 (9%)
Query: 18 VFKDAADEAGKKNWRRLMNQIEEVGS---AVAVLRSERTRGQPLPKDLVLGTLVRLK--- 71
V A ++N+ L+ +I GS AV V R + + ++ + G ++RL
Sbjct: 107 VLNCWAGRFARRNFPLLIREITISGSLKHAVHVFRWMKIQENYCARNDIYGMMIRLHARH 166
Query: 72 -----------QLKKWNVV-------SEVLEWLRIQSW-WDFNEMDFLM----------- 101
++++W S + R W W N MD +
Sbjct: 167 NQVDQARGLFFEMQEWRCKPDTDTYNSLIHAHARAGQWRWAINIMDDMQRAAIPPSRTTY 226
Query: 102 --LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQS 159
+I A G G++ KA ++ M + G P +++H ++ A+ G +Y A A F M+S
Sbjct: 227 NNVINACGAAGNWKKALELCKKMTENGVGPDLITHNIVLSAFKNGAQYSKAIAYFEIMKS 286
Query: 160 SGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGG 219
S P T I++ V+ + EA E+F ++ E ++ PD + ++Y Y G
Sbjct: 287 SKVAPDTCTMNIVIHCLVKVALYGEAIELFNSM-RERRTICPPDVVTYTSIMYSYSVCGQ 345
Query: 220 YEKARKLFALMAERGVQQSTVTYNSLMSFETNY---KEVSKIYDQMQRAGLQPDVVSYAL 276
E + +F +M GV+ + V+YN+L+ ++ E + + +++ G +PD+VSY
Sbjct: 346 AENCKAVFDMMVAEGVRPNIVSYNALLGAYASHGMHTEALETFKLLKQNGFKPDIVSYTS 405
Query: 277 LINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDR 336
L+NAYG++ E+A VF EM +P +YN L+DA+ +GM+ +A ++ M +D
Sbjct: 406 LLNAYGRSALPEKAREVFNEMRKNACKPNKVSYNALIDAYGSAGMLKEAISLLHEMEQDG 465
Query: 337 CSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMM 396
PD+ S +T+L+A K G N + Y + I Y + + +K +
Sbjct: 466 IQPDVISISTLLTACGRCRQPTKIGIILAAAKSRGIQLNTVAYNSGIGSYLSLGDYKKAL 525
Query: 397 EIYDKMRVNGIKPNQTIFTTIMDAYGKNKDF 427
E+Y MR +KP+ + ++ K F
Sbjct: 526 ELYTSMRTGNVKPDAVTYNILISGSCKLGSF 556
Score = 128 bits (321), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 82/349 (23%), Positives = 169/349 (48%), Gaps = 13/349 (3%)
Query: 145 GRYKNAEAIFRRM---QSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLK 201
G K+A +FR M ++ R Y ++++L N+ +A +F + ++ K
Sbjct: 131 GSLKHAVHVFRWMKIQENYCARND--IYGMMIRLHARHNQVDQARGLFFEM---QEWRCK 185
Query: 202 PDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSF---ETNYKEVSKI 258
PD ++ +I+ + +AG + A + M + S TYN++++ N+K+ ++
Sbjct: 186 PDTDTYNSLIHAHARAGQWRWAINIMDDMQRAAIPPSRTTYNNVINACGAAGNWKKALEL 245
Query: 259 YDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAI 318
+M G+ PD++++ ++++A+ + +A+A FE M + V P NI++
Sbjct: 246 CKKMTENGVGPDLITHNIVLSAFKNGAQYSKAIAYFEIMKSSKVAPDTCTMNIVIHCLVK 305
Query: 319 SGMVDQARTVFKCMRRDR--CSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNV 376
+ +A +F MR R C PD+ +YT+++ +Y E + F + +G PN+
Sbjct: 306 VALYGEAIELFNSMRERRTICPPDVVTYTSIMYSYSVCGQAENCKAVFDMMVAEGVRPNI 365
Query: 377 ITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKE 436
++Y L+ YA + +E + ++ NG KP+ +T++++AYG++ + A + E
Sbjct: 366 VSYNALLGAYASHGMHTEALETFKLLKQNGFKPDIVSYTSLLNAYGRSALPEKAREVFNE 425
Query: 437 MESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGINGLS 485
M P++ + N L+ +A EA LL +P + +S
Sbjct: 426 MRKNACKPNKVSYNALIDAYGSAGMLKEAISLLHEMEQDGIQPDVISIS 474
>gi|255548407|ref|XP_002515260.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223545740|gb|EEF47244.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 878
Score = 172 bits (435), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 107/369 (28%), Positives = 185/369 (50%), Gaps = 42/369 (11%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
+I+ G+ G A+ V K+GY +V + +AL+ AYGR G A +F M+S+G
Sbjct: 196 MISTLGRLGKVELAKAVFDTALKEGYGKTVYAFSALISAYGRSGYCNEAIKVFDSMKSNG 255
Query: 162 PRPSALTYQIILKLFVEAN-KFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGY 220
P+ +TY ++ + +FK+ E+F +L + ++PD+ F+ ++ + + G +
Sbjct: 256 LMPNLVTYNAVIDACGKGGVEFKKVVEIFDGMLS---NGVQPDRITFNSLLAVCSRGGLW 312
Query: 221 EKARKLFALMAERGVQQSTVTYNSLM-----------SFET------------------- 250
E AR+LF+ M ++G+ Q TYN+L+ +FE
Sbjct: 313 EAARRLFSAMVDKGIDQDIFTYNTLLDAVCKGGQMDLAFEIMSEMPTKNILPNVVTYSTM 372
Query: 251 --NYKEVSKI------YDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGV 302
Y +V ++ +++M+ G+ D VSY L++ Y K R E+AL V +EM +AG+
Sbjct: 373 IDGYAKVGRLDDALNMFNEMKFLGVGLDRVSYNTLLSVYAKLGRFEQALDVCKEMENAGI 432
Query: 303 RPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEK 362
R YN LL + D+ R VF+ M+R R SP++ +Y+T++ Y + A +
Sbjct: 433 RKDVVTYNALLAGYGKQYRYDEVRRVFEEMKRGRVSPNLLTYSTLIDVYSKGGLYKEAME 492
Query: 363 FFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYG 422
FR KQ G +V+ Y LI K +E + + D+M GI+PN + +I+DA+G
Sbjct: 493 VFREFKQAGLKADVVLYSALIDALCKNGLVESSVTLLDEMTKEGIRPNVVTYNSIIDAFG 552
Query: 423 KNKDFDSAV 431
++ V
Sbjct: 553 RSASAQCVV 561
Score = 113 bits (283), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 83/375 (22%), Positives = 177/375 (47%), Gaps = 37/375 (9%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
+ + F L+ + G + A ++ S M KG + ++ L++A +GG+ A I
Sbjct: 295 DRITFNSLLAVCSRGGLWEAARRLFSAMVDKGIDQDIFTYNTLLDAVCKGGQMDLAFEIM 354
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVF--MTLLDEEKSPLKPDQKMFHMMIY 212
M + P+ +TY ++ + + + +A +F M L + D+ ++ ++
Sbjct: 355 SEMPTKNILPNVVTYSTMIDGYAKVGRLDDALNMFNEMKFLG-----VGLDRVSYNTLLS 409
Query: 213 MYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSF---ETNYKEVSKIYDQMQRAGLQP 269
+Y K G +E+A + M G+++ VTYN+L++ + Y EV +++++M+R + P
Sbjct: 410 VYAKLGRFEQALDVCKEMENAGIRKDVVTYNALLAGYGKQYRYDEVRRVFEEMKRGRVSP 469
Query: 270 DVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVF 329
++++Y+ LI+ Y K +EA+ VF E AG++ Y+ L+DA +G+V+ + T+
Sbjct: 470 NLLTYSTLIDVYSKGGLYKEAMEVFREFKQAGLKADVVLYSALIDALCKNGLVESSVTLL 529
Query: 330 KCMRRDRCSPDICSYTTMLSAYVNASDMEG------------AEKFFRRLKQDGFVPN-- 375
M ++ P++ +Y +++ A+ ++ + E + Q+
Sbjct: 530 DEMTKEGIRPNVVTYNSIIDAFGRSASAQCVVDDSGETTALQVESLSSIVVQEAIESQAA 589
Query: 376 -------VITYGTLIKGYA-KVNNLEK-----MMEIYDKMRVNGIKPNQTIFTTIMDAYG 422
+ +G L A + N K ++ ++ KM IKPN F+ I++A
Sbjct: 590 DKEDNRIIEIFGKLAAEKACEAKNSGKQEILCILGVFQKMHELKIKPNVVTFSAILNACS 649
Query: 423 KNKDFDSAVVWYKEM 437
+ F+ A + +E+
Sbjct: 650 RCDSFEDASMLLEEL 664
Score = 112 bits (279), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 70/270 (25%), Positives = 127/270 (47%), Gaps = 4/270 (1%)
Query: 207 FHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSF----ETNYKEVSKIYDQM 262
F +I Y ++G +A K+F M G+ + VTYN+++ +K+V +I+D M
Sbjct: 228 FSALISAYGRSGYCNEAIKVFDSMKSNGLMPNLVTYNAVIDACGKGGVEFKKVVEIFDGM 287
Query: 263 QRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMV 322
G+QPD +++ L+ + E A +F M+D G+ YN LLDA G +
Sbjct: 288 LSNGVQPDRITFNSLLAVCSRGGLWEAARRLFSAMVDKGIDQDIFTYNTLLDAVCKGGQM 347
Query: 323 DQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTL 382
D A + M P++ +Y+TM+ Y ++ A F +K G + ++Y TL
Sbjct: 348 DLAFEIMSEMPTKNILPNVVTYSTMIDGYAKVGRLDDALNMFNEMKFLGVGLDRVSYNTL 407
Query: 383 IKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGF 442
+ YAK+ E+ +++ +M GI+ + + ++ YGK +D ++EM+
Sbjct: 408 LSVYAKLGRFEQALDVCKEMENAGIRKDVVTYNALLAGYGKQYRYDEVRRVFEEMKRGRV 467
Query: 443 PPDQKAKNILLSLAKTADERNEANELLGNF 472
P+ + L+ + EA E+ F
Sbjct: 468 SPNLLTYSTLIDVYSKGGLYKEAMEVFREF 497
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 69/289 (23%), Positives = 126/289 (43%), Gaps = 26/289 (8%)
Query: 94 FNEMDFL----------MLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGR 143
FNEM FL L++ Y K G F +A V M G VV++ AL+ YG+
Sbjct: 389 FNEMKFLGVGLDRVSYNTLLSVYAKLGRFEQALDVCKEMENAGIRKDVVTYNALLAGYGK 448
Query: 144 GGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPD 203
RY +F M+ P+ LTY ++ ++ + +KEA EVF +++ LK D
Sbjct: 449 QYRYDEVRRVFEEMKRGRVSPNLLTYSTLIDVYSKGGLYKEAMEVFREF---KQAGLKAD 505
Query: 204 QKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLM-SFETNYKEVSKIYDQM 262
++ +I K G E + L M + G++ + VTYNS++ +F + + D
Sbjct: 506 VVLYSALIDALCKNGLVESSVTLLDEMTKEGIRPNVVTYNSIIDAFGRSASAQCVVDDSG 565
Query: 263 QRAGLQPDVVSYALL---INAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAIS 319
+ LQ + +S ++ I + + + + +F ++ A + + + I
Sbjct: 566 ETTALQVESLSSIVVQEAIESQAADKEDNRIIEIFGKL--AAEKACEAKNSGKQEILCIL 623
Query: 320 GMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLK 368
G VF+ M + P++ +++ +L+A E A L+
Sbjct: 624 G-------VFQKMHELKIKPNVVTFSAILNACSRCDSFEDASMLLEELR 665
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 49/219 (22%), Positives = 97/219 (44%), Gaps = 3/219 (1%)
Query: 274 YALLINAYGKARREEEALAVFEEML--DAGVRPTHKAYNILLDAFAISGMVDQARTVFKC 331
Y L+ G +A+ FE + ++G K + ++ G V+ A+ VF
Sbjct: 156 YTFLLRELGNRGDSAKAVRCFEFAVRRESGKNEQGKLASAMISTLGRLGKVELAKAVFDT 215
Query: 332 MRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVN- 390
++ + +++ ++SAY + A K F +K +G +PN++TY +I K
Sbjct: 216 ALKEGYGKTVYAFSALISAYGRSGYCNEAIKVFDSMKSNGLMPNLVTYNAVIDACGKGGV 275
Query: 391 NLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKN 450
+K++EI+D M NG++P++ F +++ + +++A + M G D N
Sbjct: 276 EFKKVVEIFDGMLSNGVQPDRITFNSLLAVCSRGGLWEAARRLFSAMVDKGIDQDIFTYN 335
Query: 451 ILLSLAKTADERNEANELLGNFNHPNNEPGINGLSISVD 489
LL + + A E++ N P + S +D
Sbjct: 336 TLLDAVCKGGQMDLAFEIMSEMPTKNILPNVVTYSTMID 374
>gi|168014206|ref|XP_001759643.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162689182|gb|EDQ75555.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 1043
Score = 172 bits (435), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 111/394 (28%), Positives = 193/394 (48%), Gaps = 10/394 (2%)
Query: 99 FLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQ 158
+ ++I K D ++A V M ++G P + ++ L+ + + + A IF +Q
Sbjct: 636 YSLVINCLCKSDDVDQALDVFGRMKEEGMEPLLGNYKTLLSSLVKDEKIDFALQIFNELQ 695
Query: 159 SSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSP-LKPDQKMFHMMIYMYKKA 217
S P Y I++ V++N+ EA L+D K+ + PD + ++ K+
Sbjct: 696 ESSLVPDTFVYNIMVNGLVKSNRVDEA----CKLVDSMKNQNILPDLFTYTSLLDGLGKS 751
Query: 218 GGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSK---IYDQMQRAGLQPDVVSY 274
G E+A +F M E G + V Y SLM ++S I+ M + PDVV+Y
Sbjct: 752 GRLEEAFNMFTKMTEEGHEPDVVAYTSLMDVLGKGGKLSHALIIFRAMAKKRCVPDVVTY 811
Query: 275 ALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRR 334
+ LI++ GK R EEA FE + G P Y+ L+D+F GMVD+A +F+ M+R
Sbjct: 812 SSLIDSLGKEGRVEEAYYFFENSISKGCTPNVGVYSSLIDSFGKKGMVDRALELFEEMQR 871
Query: 335 DRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEK 394
+C P+I +Y +LS A + AEK +++ G VP+++TY LI G K+ +++
Sbjct: 872 RQCPPNIVTYNNLLSGLAKAGRLNVAEKLLEEMEKVGCVPDLVTYNILIDGVGKMGMVDE 931
Query: 395 MMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLS 454
+ +M+ GI P+ FT+++++ GK A + ME G+ P N+L+
Sbjct: 932 AESYFKRMKEKGIVPDVITFTSLIESLGKVDKLLEACELFDSMEEEGYNPSVVTYNVLID 991
Query: 455 LAKTADERNEANELLGNFNHPNNEPGINGLSISV 488
+ A + +EA + P +G++I +
Sbjct: 992 ILGRAGKVHEAAMIFHEMKVKGCMP--DGITIGI 1023
Score = 166 bits (421), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 104/400 (26%), Positives = 196/400 (49%), Gaps = 8/400 (2%)
Query: 94 FNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAI 153
E+ + L++A+ G ++A K+L M K P+VV++T L++ G+ GR A ++
Sbjct: 526 LGEITYNTLMSAFIHNGHVDEAVKLLEVMKKHECIPTVVTYTTLVDGLGKAGRLDEAVSL 585
Query: 154 FRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDE-EKSPLKPDQKMFHMMIY 212
R M+ G PS +TY ++ F + ++ EE ++L DE + D + ++I
Sbjct: 586 LREMEKQGCEPSVVTYSSLMASFYK----RDQEEESLSLFDEMVRKGCVADVSTYSLVIN 641
Query: 213 MYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVS---KIYDQMQRAGLQP 269
K+ ++A +F M E G++ Y +L+S +++ +I++++Q + L P
Sbjct: 642 CLCKSDDVDQALDVFGRMKEEGMEPLLGNYKTLLSSLVKDEKIDFALQIFNELQESSLVP 701
Query: 270 DVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVF 329
D Y +++N K+ R +EA + + M + + P Y LLD SG +++A +F
Sbjct: 702 DTFVYNIMVNGLVKSNRVDEACKLVDSMKNQNILPDLFTYTSLLDGLGKSGRLEEAFNMF 761
Query: 330 KCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKV 389
M + PD+ +YT+++ + A FR + + VP+V+TY +LI K
Sbjct: 762 TKMTEEGHEPDVVAYTSLMDVLGKGGKLSHALIIFRAMAKKRCVPDVVTYSSLIDSLGKE 821
Query: 390 NNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAK 449
+E+ ++ G PN ++++++D++GK D A+ ++EM+ PP+
Sbjct: 822 GRVEEAYYFFENSISKGCTPNVGVYSSLIDSFGKKGMVDRALELFEEMQRRQCPPNIVTY 881
Query: 450 NILLSLAKTADERNEANELLGNFNHPNNEPGINGLSISVD 489
N LLS A N A +LL P + +I +D
Sbjct: 882 NNLLSGLAKAGRLNVAEKLLEEMEKVGCVPDLVTYNILID 921
Score = 142 bits (357), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 107/432 (24%), Positives = 198/432 (45%), Gaps = 42/432 (9%)
Query: 61 DLVLGTLVRLKQLKKWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLS 120
+ VL LV+ +V L RIQ + F + + ++ + G + A + +
Sbjct: 256 NFVLELLVKGGFYHSAVIVFGKLGQFRIQP----DAQTFRIFVHSFNRSGRLDPAAEPIQ 311
Query: 121 FMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEAN 180
M K G P V + T L++A + G A F M++ P+ +TY ++ +A
Sbjct: 312 EMIKSGIDPGVHTFTVLIDALVKSGNIDEACKFFNGMKNLRCSPNVVTYTTLVNGLAKAG 371
Query: 181 KFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTV 240
+ +EA EVF+ + + S PD ++ +I KAG + A LF M +RG+ +
Sbjct: 372 RLEEACEVFVEMKENNCS---PDAIAYNTLIDGLGKAGEADMACGLFKEMKDRGLVPNLR 428
Query: 241 TYNSLMSF---ETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEM 297
TYN ++S E +++ ++ G PDV +Y LI+ GK + ++ LA+ +EM
Sbjct: 429 TYNIMISVLGKAGRQPEAWQLFHDLKEQGAVPDVFTYNTLIDVLGKGGQMDKVLAIIKEM 488
Query: 298 LDAG--------VRPTHKA-----------------------YNILLDAFAISGMVDQAR 326
++ G H+ YN L+ AF +G VD+A
Sbjct: 489 VEKGGECIISRDSNAGHEGTIEGADRTVEYPSLGFKSLGEITYNTLMSAFIHNGHVDEAV 548
Query: 327 TVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGY 386
+ + M++ C P + +YTT++ A ++ A R +++ G P+V+TY +L+ +
Sbjct: 549 KLLEVMKKHECIPTVVTYTTLVDGLGKAGRLDEAVSLLREMEKQGCEPSVVTYSSLMASF 608
Query: 387 AKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPP-D 445
K + E+ + ++D+M G + + ++ +++ K+ D D A+ + M+ G P
Sbjct: 609 YKRDQEEESLSLFDEMVRKGCVADVSTYSLVINCLCKSDDVDQALDVFGRMKEEGMEPLL 668
Query: 446 QKAKNILLSLAK 457
K +L SL K
Sbjct: 669 GNYKTLLSSLVK 680
Score = 138 bits (348), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 108/431 (25%), Positives = 178/431 (41%), Gaps = 37/431 (8%)
Query: 85 WLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRG 144
W Q + + ++I + + ++L+ M K+G+ S+ T+L+ +G
Sbjct: 171 WAGQQDGYSHTVGTYTLMIKRLAGAQETDAVVQILTAMWKEGHRISMHLLTSLLRTFGST 230
Query: 145 GRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQ 204
A IF +M+S G PS Y +L+L V+ + A VF L + ++PD
Sbjct: 231 NNVSGALEIFNQMKSFGCNPSTNMYNFVLELLVKGGFYHSAVIVFGKL---GQFRIQPDA 287
Query: 205 KMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSF---ETNYKEVSKIYDQ 261
+ F + ++ + ++G + A + M + G+ T+ L+ N E K ++
Sbjct: 288 QTFRIFVHSFNRSGRLDPAAEPIQEMIKSGIDPGVHTFTVLIDALVKSGNIDEACKFFNG 347
Query: 262 MQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGM 321
M+ P+VV+Y L+N KA R EEA VF EM + P AYN L+D +G
Sbjct: 348 MKNLRCSPNVVTYTTLVNGLAKAGRLEEACEVFVEMKENNCSPDAIAYNTLIDGLGKAGE 407
Query: 322 VDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGT 381
D A +FK M+ P++ +Y M+S A A + F LK+ G VP+V TY T
Sbjct: 408 ADMACGLFKEMKDRGLVPNLRTYNIMISVLGKAGRQPEAWQLFHDLKEQGAVPDVFTYNT 467
Query: 382 LIKGYAKVNNLEKMMEIYDKMRVNGIKP-------------------------------N 410
LI K ++K++ I +M G +
Sbjct: 468 LIDVLGKGGQMDKVLAIIKEMVEKGGECIISRDSNAGHEGTIEGADRTVEYPSLGFKSLG 527
Query: 411 QTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLG 470
+ + T+M A+ N D AV + M+ P L+ A +EA LL
Sbjct: 528 EITYNTLMSAFIHNGHVDEAVKLLEVMKKHECIPTVVTYTTLVDGLGKAGRLDEAVSLLR 587
Query: 471 NFNHPNNEPGI 481
EP +
Sbjct: 588 EMEKQGCEPSV 598
Score = 125 bits (315), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 96/435 (22%), Positives = 183/435 (42%), Gaps = 37/435 (8%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
L+ +G + + A ++ + M G PS + ++E +GG Y +A +F ++
Sbjct: 223 LLRTFGSTNNVSGALEIFNQMKSFGCNPSTNMYNFVLELLVKGGFYHSAVIVFGKLGQFR 282
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
+P A T++I + F + + A E ++ KS + P F ++I K+G +
Sbjct: 283 IQPDAQTFRIFVHSFNRSGRLDPAAEPIQEMI---KSGIDPGVHTFTVLIDALVKSGNID 339
Query: 222 KARKLFALMAERGVQQSTVTYNSL---MSFETNYKEVSKIYDQMQRAGLQPDVVSYALLI 278
+A K F M + VTY +L ++ +E +++ +M+ PD ++Y LI
Sbjct: 340 EACKFFNGMKNLRCSPNVVTYTTLVNGLAKAGRLEEACEVFVEMKENNCSPDAIAYNTLI 399
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCS 338
+ GKA + A +F+EM D G+ P + YNI++ +G +A +F ++
Sbjct: 400 DGLGKAGEADMACGLFKEMKDRGLVPNLRTYNIMISVLGKAGRQPEAWQLFHDLKEQGAV 459
Query: 339 PDICSYTTMLSAYVNASDME------------GAEKFFRRLKQDGFVPNV---------- 376
PD+ +Y T++ M+ G E R G +
Sbjct: 460 PDVFTYNTLIDVLGKGGQMDKVLAIIKEMVEKGGECIISRDSNAGHEGTIEGADRTVEYP 519
Query: 377 ---------ITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDF 427
ITY TL+ + ++++ +++ + M+ + P +TT++D GK
Sbjct: 520 SLGFKSLGEITYNTLMSAFIHNGHVDEAVKLLEVMKKHECIPTVVTYTTLVDGLGKAGRL 579
Query: 428 DSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGINGLSIS 487
D AV +EME G P + L++ D+ E+ L ++ S+
Sbjct: 580 DEAVSLLREMEKQGCEPSVVTYSSLMASFYKRDQEEESLSLFDEMVRKGCVADVSTYSLV 639
Query: 488 VDEEDDDDDDDEDDD 502
++ DD D+ D
Sbjct: 640 INCLCKSDDVDQALD 654
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 76/305 (24%), Positives = 135/305 (44%), Gaps = 26/305 (8%)
Query: 203 DQKMFHMMIYMYKKAG---GYEKARKLFALMAER--GVQQSTVTYNSLMSF--------- 248
+QK H+ + AG GY + LM +R G Q++ L +
Sbjct: 158 NQKDLHLAKCFFTWAGQQDGYSHTVGTYTLMIKRLAGAQETDAVVQILTAMWKEGHRISM 217
Query: 249 ------------ETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEE 296
N +I++QM+ G P Y ++ K A+ VF +
Sbjct: 218 HLLTSLLRTFGSTNNVSGALEIFNQMKSFGCNPSTNMYNFVLELLVKGGFYHSAVIVFGK 277
Query: 297 MLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASD 356
+ ++P + + I + +F SG +D A + M + P + ++T ++ A V + +
Sbjct: 278 LGQFRIQPDAQTFRIFVHSFNRSGRLDPAAEPIQEMIKSGIDPGVHTFTVLIDALVKSGN 337
Query: 357 MEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTT 416
++ A KFF +K PNV+TY TL+ G AK LE+ E++ +M+ N P+ + T
Sbjct: 338 IDEACKFFNGMKNLRCSPNVVTYTTLVNGLAKAGRLEEACEVFVEMKENNCSPDAIAYNT 397
Query: 417 IMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPN 476
++D GK + D A +KEM+ G P+ + NI++S+ A + EA +L +
Sbjct: 398 LIDGLGKAGEADMACGLFKEMKDRGLVPNLRTYNIMISVLGKAGRQPEAWQLFHDLKEQG 457
Query: 477 NEPGI 481
P +
Sbjct: 458 AVPDV 462
>gi|359481811|ref|XP_002278330.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g41720-like [Vitis vinifera]
Length = 848
Score = 172 bits (435), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 128/537 (23%), Positives = 238/537 (44%), Gaps = 112/537 (20%)
Query: 28 KKNWRRLMNQIEEVGS---AVAVLRSERTRGQPLPKDLVLGTLVRLK------------- 71
+KN+ L+ +I ++GS +V V R + + ++ + ++RL
Sbjct: 126 RKNFPLLIREITQIGSLEHSVQVFRWMKNQKNYCARNDIYNMMIRLHARHNIVDQARGLF 185
Query: 72 -QLKKWNVV--SEVLEWL-----RIQSW-WDFNEMDFLM-------------LITAYGKQ 109
+++KW +E L R W W N MD ++ LI A G
Sbjct: 186 FEMQKWRCKPDAETYNALINAHGRAGQWRWAMNIMDDMLRAAIPPSRSTYNNLINACGSS 245
Query: 110 GDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTY 169
G++ +A V M + G P +V+H ++ AY RG +Y + F M+ + RP T
Sbjct: 246 GNWKEALNVCKKMTENGVGPDLVTHNIVLSAYKRGNQYSKVLSYFELMKGTNIRPDTTTL 305
Query: 170 QIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFAL 229
I++ V+ + +A ++F ++ E++S PD F +I++Y G E + F
Sbjct: 306 NIVIYCLVKLGQNGKAIDIFNSM-KEKRSECYPDVVTFTTIIHLYSVCGQIENCQTAFNT 364
Query: 230 MAERGVQQSTVTYNSLMSFETNY---KEVSKIYDQMQRAGLQPDVVSYALLINAYGKARR 286
M G++ + V+YN+L+ ++ KE +++++++ G PDVVSY L+NAYGK+ +
Sbjct: 365 MLAEGLKPNIVSYNALIGAYASHGMDKEAFSVFNEIKKNGFHPDVVSYTSLLNAYGKSGK 424
Query: 287 EEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTT 346
E+A+ VFE M +P +YN L+DA+ G++ +A + M R+ P+I S T
Sbjct: 425 PEKAMKVFELMRRNHCKPNLVSYNALIDAYGSKGLLTEAVEILHEMERNGVQPNIVSICT 484
Query: 347 MLSA-----------------------------------YVNASDMEGAEKFFRRLKQDG 371
+L+A Y++ + + A +R ++
Sbjct: 485 LLAACGRCGQKVKIKSVLSAAELRGIKLNTTAYNSAIGSYLSVGEYDKALSLYRAMRTKK 544
Query: 372 FVPNVITYGTLIKGYAKVNN-------LEKMMEI-------------------------- 398
P+ +TY LI G K++ L++MM++
Sbjct: 545 VKPDPVTYNVLISGCCKMSKYGEALGFLDEMMDLKIPLSKEVYSSVICAYSKQGQVTEAE 604
Query: 399 --YDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILL 453
+ KM++ G +P+ +T ++ AY ++++ A + EME+ PD A + L+
Sbjct: 605 SMFTKMKMVGCRPDVITYTAMIHAYDVAENWEKASALFLEMETDDVQPDSIACSSLM 661
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 90/347 (25%), Positives = 174/347 (50%), Gaps = 6/347 (1%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + + LI AY G +A V + + K G+ P VVS+T+L+ AYG+ G+ + A +F
Sbjct: 373 NIVSYNALIGAYASHGMDKEAFSVFNEIKKNGFHPDVVSYTSLLNAYGKSGKPEKAMKVF 432
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
M+ + +P+ ++Y ++ + EA E+ L + E++ ++P+ ++
Sbjct: 433 ELMRRNHCKPNLVSYNALIDAYGSKGLLTEAVEI---LHEMERNGVQPNIVSICTLLAAC 489
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSK---IYDQMQRAGLQPDV 271
+ G K + + + RG++ +T YNS + + E K +Y M+ ++PD
Sbjct: 490 GRCGQKVKIKSVLSAAELRGIKLNTTAYNSAIGSYLSVGEYDKALSLYRAMRTKKVKPDP 549
Query: 272 VSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKC 331
V+Y +LI+ K + EAL +EM+D + + + Y+ ++ A++ G V +A ++F
Sbjct: 550 VTYNVLISGCCKMSKYGEALGFLDEMMDLKIPLSKEVYSSVICAYSKQGQVTEAESMFTK 609
Query: 332 MRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNN 391
M+ C PD+ +YT M+ AY A + E A F ++ D P+ I +L++ + K
Sbjct: 610 MKMVGCRPDVITYTAMIHAYDVAENWEKASALFLEMETDDVQPDSIACSSLMRAFNKGGQ 669
Query: 392 LEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEME 438
K++ + + MR I N + F ++ A +++ + K ME
Sbjct: 670 PAKVLVLAEFMREKKIPFNNSSFFEMVSACSLLREWREIIGLIKLME 716
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 77/318 (24%), Positives = 155/318 (48%), Gaps = 8/318 (2%)
Query: 169 YQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFA 228
Y ++++L N +A +F + +K KPD + ++ +I + +AG + A +
Sbjct: 165 YNMMIRLHARHNIVDQARGLFFEM---QKWRCKPDAETYNALINAHGRAGQWRWAMNIMD 221
Query: 229 LMAERGVQQSTVTYNSLMSF---ETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKAR 285
M + S TYN+L++ N+KE + +M G+ PD+V++ ++++AY +
Sbjct: 222 DMLRAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTENGVGPDLVTHNIVLSAYKRGN 281
Query: 286 REEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMR--RDRCSPDICS 343
+ + L+ FE M +RP NI++ G +A +F M+ R C PD+ +
Sbjct: 282 QYSKVLSYFELMKGTNIRPDTTTLNIVIYCLVKLGQNGKAIDIFNSMKEKRSECYPDVVT 341
Query: 344 YTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMR 403
+TT++ Y +E + F + +G PN+++Y LI YA ++ ++++++
Sbjct: 342 FTTIIHLYSVCGQIENCQTAFNTMLAEGLKPNIVSYNALIGAYASHGMDKEAFSVFNEIK 401
Query: 404 VNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERN 463
NG P+ +T++++AYGK+ + A+ ++ M P+ + N L+ +
Sbjct: 402 KNGFHPDVVSYTSLLNAYGKSGKPEKAMKVFELMRRNHCKPNLVSYNALIDAYGSKGLLT 461
Query: 464 EANELLGNFNHPNNEPGI 481
EA E+L +P I
Sbjct: 462 EAVEILHEMERNGVQPNI 479
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 98/432 (22%), Positives = 172/432 (39%), Gaps = 83/432 (19%)
Query: 97 MDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRR 156
+ + L+ AYGK G KA KV M + P++VS+ AL++AYG G A I
Sbjct: 410 VSYTSLLNAYGKSGKPEKAMKVFELMRRNHCKPNLVSYNALIDAYGSKGLLTEAVEILHE 469
Query: 157 MQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKK 216
M+ +G +P+ ++ I L + + ++ L E +K + ++ I Y
Sbjct: 470 MERNGVQPNIVS---ICTLLAACGRCGQKVKIKSVLSAAELRGIKLNTTAYNSAIGSYLS 526
Query: 217 AGGYEKARKLFALMAERGVQQSTVTYNSLMSF---------------------------- 248
G Y+KA L+ M + V+ VTYN L+S
Sbjct: 527 VGEYDKALSLYRAMRTKKVKPDPVTYNVLISGCCKMSKYGEALGFLDEMMDLKIPLSKEV 586
Query: 249 ----------ETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEML 298
+ E ++ +M+ G +PDV++Y +I+AY A E+A A+F EM
Sbjct: 587 YSSVICAYSKQGQVTEAESMFTKMKMVGCRPDVITYTAMIHAYDVAENWEKASALFLEME 646
Query: 299 DAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYV------ 352
V+P A + L+ AF G + + + MR + + S+ M+SA
Sbjct: 647 TDDVQPDSIACSSLMRAFNKGGQPAKVLVLAEFMREKKIPFNNSSFFEMVSACSLLREWR 706
Query: 353 -----------------------------NASDMEGAEKFFRRLKQDGFVPNVITYGTLI 383
+ +E K F ++ G N TY L+
Sbjct: 707 EIIGLIKLMEPSISVVSIGLLNQLLHFLGKSGKIETMMKLFYKIVASGAEINFYTYSILL 766
Query: 384 KGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFD--SAVVWYKEMESCG 441
K N K +E+ M G++P+ ++ +I ++ +N+ +AV+ E G
Sbjct: 767 KNLLAAGNWRKYIEVLQWMEEAGLQPSVGMYRSI-SSFAQNRSGAEYAAVI----QERIG 821
Query: 442 FPPDQKAKNILL 453
P + ++ +L+
Sbjct: 822 MPDNSSSQALLI 833
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 71/297 (23%), Positives = 137/297 (46%), Gaps = 7/297 (2%)
Query: 163 RPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEK 222
R S + ++++ + + + +VF + +++ + D +++MMI ++ + ++
Sbjct: 123 RFSRKNFPLLIREITQIGSLEHSVQVFRWMKNQKNYCARND--IYNMMIRLHARHNIVDQ 180
Query: 223 ARKLFALMAERGVQQSTVTYNSLMSFET---NYKEVSKIYDQMQRAGLQPDVVSYALLIN 279
AR LF M + + TYN+L++ ++ I D M RA + P +Y LIN
Sbjct: 181 ARGLFFEMQKWRCKPDAETYNALINAHGRAGQWRWAMNIMDDMLRAAIPPSRSTYNNLIN 240
Query: 280 AYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSP 339
A G + +EAL V ++M + GV P +NI+L A+ + + F+ M+ P
Sbjct: 241 ACGSSGNWKEALNVCKKMTENGVGPDLVTHNIVLSAYKRGNQYSKVLSYFELMKGTNIRP 300
Query: 340 DICSYTTMLSAYVNASDMEGAEKFFRRLKQ--DGFVPNVITYGTLIKGYAKVNNLEKMME 397
D + ++ V A F +K+ P+V+T+ T+I Y+ +E
Sbjct: 301 DTTTLNIVIYCLVKLGQNGKAIDIFNSMKEKRSECYPDVVTFTTIIHLYSVCGQIENCQT 360
Query: 398 IYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLS 454
++ M G+KPN + ++ AY + A + E++ GF PD + LL+
Sbjct: 361 AFNTMLAEGLKPNIVSYNALIGAYASHGMDKEAFSVFNEIKKNGFHPDVVSYTSLLN 417
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 50/217 (23%), Positives = 85/217 (39%), Gaps = 36/217 (16%)
Query: 273 SYALLINAYGKARREEEALAVFEEMLD-AGVRPTHKAYNILLDAFAISGMVDQARTVFKC 331
++ LLI + E ++ VF M + + YN+++ A +VDQAR +F
Sbjct: 128 NFPLLIREITQIGSLEHSVQVFRWMKNQKNYCARNDIYNMMIRLHARHNIVDQARGLFFE 187
Query: 332 MRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNN 391
M++ RC PD AE TY LI + +
Sbjct: 188 MQKWRCKPD-------------------AE----------------TYNALINAHGRAGQ 212
Query: 392 LEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNI 451
M I D M I P+++ + +++A G + ++ A+ K+M G PD NI
Sbjct: 213 WRWAMNIMDDMLRAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTENGVGPDLVTHNI 272
Query: 452 LLSLAKTADERNEANELLGNFNHPNNEPGINGLSISV 488
+LS K ++ ++ N P L+I +
Sbjct: 273 VLSAYKRGNQYSKVLSYFELMKGTNIRPDTTTLNIVI 309
Score = 38.5 bits (88), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 43/209 (20%), Positives = 87/209 (41%), Gaps = 27/209 (12%)
Query: 46 AVLRSERTRGQPLPKDLVLGTLVRLKQLKKWNVVSEVLEWLRIQSWWDFNEMDFLMLITA 105
+++R+ GQP K LVL +R K++ FN F +++A
Sbjct: 659 SLMRAFNKGGQP-AKVLVLAEFMREKKI-------------------PFNNSSFFEMVSA 698
Query: 106 YGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPS 165
++ + ++ M S+ L+ G+ G+ + +F ++ +SG +
Sbjct: 699 CSLLREWREIIGLIKLMEPSISVVSIGLLNQLLHFLGKSGKIETMMKLFYKIVASGAEIN 758
Query: 166 ALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARK 225
TY I+LK + A +++ EV + E++ L+P M+ + + G E A
Sbjct: 759 FYTYSILLKNLLAAGNWRKYIEVLQWM---EEAGLQPSVGMYRSISSFAQNRSGAEYA-- 813
Query: 226 LFALMAERGVQQSTVTYNSLMSFETNYKE 254
A++ ER + +L+ E ++E
Sbjct: 814 --AVIQERIGMPDNSSSQALLIPEEKFQE 840
>gi|414887034|tpg|DAA63048.1| TPA: crs2 associated factor1 [Zea mays]
Length = 617
Score = 172 bits (435), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 108/377 (28%), Positives = 188/377 (49%), Gaps = 28/377 (7%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
LI+A+ + + A ++L+ G P + TAL+ A G GR AEA+F +G
Sbjct: 234 LISAFARAALPDAALELLASAQAIGLTPRSNAVTALISALGTAGRVAEAEALFLEFFLAG 293
Query: 162 P-RPSALTYQIILKLFVEANKFKEAEEVFMTLLDE-EKSPLKPDQKMFHMMIYMYKKAGG 219
+P Y +LK +V K AE+V LDE + + PD+ + +++ Y +AG
Sbjct: 294 EIKPRTRAYNALLKGYVRIASLKNAEQV----LDEMSQCGVAPDEATYSLLVDAYTRAGR 349
Query: 220 YEKARKLFALMAERGVQQSTVTYNSLMSF---ETNYKEVSKIYDQMQRAGLQPDVVSYAL 276
+E AR L M GV+ S+ ++ +++ ++++ + +MQ +G++PD Y +
Sbjct: 350 WESARILLKEMEADGVKPSSYVFSRILAGFRDRGDWQKAFAVLREMQASGVRPDRHFYNV 409
Query: 277 LINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDR 336
+I+ +GK A+ F +M + G+ P +N L+DA G D+A +F+ MR
Sbjct: 410 MIDTFGKYNCLGHAMDAFNKMREEGIEPDVVTWNTLIDAHCKGGRHDRAAELFEEMRESN 469
Query: 337 CSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMM 396
C P +Y M++ EG E +K+ G VPN+ITY TL+ Y + ++ +
Sbjct: 470 CPPGTTTYNIMINLLGEQEHWEGVEAMLSEMKEQGLVPNIITYTTLVDVYGRSGRYKEAI 529
Query: 397 EIYDKMRVNGIKPNQTI-------------------FTTIMDAYGKNKDFDSAVVWYKEM 437
+ + M+ +G+KP+ T+ +TT+M A + + FD V Y+EM
Sbjct: 530 DCIEAMKADGLKPSPTMYHALVNAYAQRGLRPDVITYTTLMKALIRVEQFDKVPVIYEEM 589
Query: 438 ESCGFPPDQKAKNILLS 454
+ G PD+KA+ +L S
Sbjct: 590 ITSGCAPDRKARAMLRS 606
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 73/301 (24%), Positives = 144/301 (47%), Gaps = 22/301 (7%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
+E + +L+ AY + G + A +L M G PS + ++ + G ++ A A+
Sbjct: 333 DEATYSLLVDAYTRAGRWESARILLKEMEADGVKPSSYVFSRILAGFRDRGDWQKAFAVL 392
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
R MQ+SG RP Y +++ F + N A + F + +E ++PD ++ +I +
Sbjct: 393 REMQASGVRPDRHFYNVMIDTFGKYNCLGHAMDAFNKMREEG---IEPDVVTWNTLIDAH 449
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYN---SLMSFETNYKEVSKIYDQMQRAGLQPDV 271
K G +++A +LF M E T TYN +L+ + +++ V + +M+ GL P++
Sbjct: 450 CKGGRHDRAAELFEEMRESNCPPGTTTYNIMINLLGEQEHWEGVEAMLSEMKEQGLVPNI 509
Query: 272 VSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKC 331
++Y L++ YG++ R +EA+ E M G++P+ Y+ L++A+A G+
Sbjct: 510 ITYTTLVDVYGRSGRYKEAIDCIEAMKADGLKPSPTMYHALVNAYAQRGL---------- 559
Query: 332 MRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNN 391
PD+ +YTT++ A + + + + G P+ L G + +
Sbjct: 560 ------RPDVITYTTLMKALIRVEQFDKVPVIYEEMITSGCAPDRKARAMLRSGLKYIKH 613
Query: 392 L 392
+
Sbjct: 614 M 614
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 75/296 (25%), Positives = 135/296 (45%), Gaps = 4/296 (1%)
Query: 164 PSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKA 223
P +Y +L + +A + L D +S L+PD +F +I + +A + A
Sbjct: 188 PDLASYSHLLASLLNTRDPPDAALLERLLGDLRESRLEPDAPLFSDLISAFARAALPDAA 247
Query: 224 RKLFALMAERGVQQSTVTYNSLMS---FETNYKEVSKIYDQMQRAG-LQPDVVSYALLIN 279
+L A G+ + +L+S E ++ + AG ++P +Y L+
Sbjct: 248 LELLASAQAIGLTPRSNAVTALISALGTAGRVAEAEALFLEFFLAGEIKPRTRAYNALLK 307
Query: 280 AYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSP 339
Y + + A V +EM GV P Y++L+DA+ +G + AR + K M D P
Sbjct: 308 GYVRIASLKNAEQVLDEMSQCGVAPDEATYSLLVDAYTRAGRWESARILLKEMEADGVKP 367
Query: 340 DICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIY 399
++ +L+ + + D + A R ++ G P+ Y +I + K N L M+ +
Sbjct: 368 SSYVFSRILAGFRDRGDWQKAFAVLREMQASGVRPDRHFYNVMIDTFGKYNCLGHAMDAF 427
Query: 400 DKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSL 455
+KMR GI+P+ + T++DA+ K D A ++EM PP NI+++L
Sbjct: 428 NKMREEGIEPDVVTWNTLIDAHCKGGRHDRAAELFEEMRESNCPPGTTTYNIMINL 483
>gi|449518511|ref|XP_004166285.1| PREDICTED: pentatricopeptide repeat-containing protein At2g31400,
chloroplastic-like [Cucumis sativus]
Length = 868
Score = 172 bits (435), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 115/404 (28%), Positives = 202/404 (50%), Gaps = 15/404 (3%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
+I+ G+ G A+ V +GY +V + +AL+ AYG+ G + A +F M+ SG
Sbjct: 193 MISTLGRLGKVELAKGVFETALSEGYGNTVFAFSALISAYGKSGYFDEAIKVFESMKVSG 252
Query: 162 PRPSALTYQIILKLFVEAN-KFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGY 220
+P+ +TY ++ + +FK E+F +L ++ ++PD+ ++ ++ + + G +
Sbjct: 253 LKPNLVTYNAVIDACGKGGVEFKRVVEIFEEML---RNGVQPDRITYNSLLAVCSRGGLW 309
Query: 221 EKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSKIYD---QMQRAGLQPDVVSYALL 277
E AR LF M +RG+ Q TYN+L+ ++ Y+ +M + P+VV+Y+ +
Sbjct: 310 EAARNLFNEMIDRGIDQDVFTYNTLLDAVCKGGQMDLAYEIMLEMPGKKILPNVVTYSTM 369
Query: 278 INAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRC 337
+ Y KA R E+AL ++ EM G+ +YN LL +A G + A V K M
Sbjct: 370 ADGYAKAGRLEDALNLYNEMKFLGIGLDRVSYNTLLSIYAKLGRFEDALKVCKEMGSSGV 429
Query: 338 SPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMME 397
D+ +Y +L Y + F+ +K+D PN++TY TLI Y+K + E+ ME
Sbjct: 430 KKDVVTYNALLDGYGKQGKFNEVTRVFKEMKKDRVFPNLLTYSTLIDVYSKGSLYEEAME 489
Query: 398 IYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAK 457
++ + + G+K + +++ +++A KN DSAV+ EM G P+ N ++
Sbjct: 490 VFREFKQAGLKADVVLYSELINALCKNGLVDSAVLLLDEMTKEGIRPNVVTYNSIID--- 546
Query: 458 TADERNEANELL----GNFNHPNNEPGINGLSISVDEEDDDDDD 497
A R+ E L G N +E L VDE + + DD
Sbjct: 547 -AFGRSTTAEFLVDGVGASNERQSESPTFMLIEGVDESEINWDD 589
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 88/353 (24%), Positives = 150/353 (42%), Gaps = 62/353 (17%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + + + Y K G A + + M G VS+ L+ Y + GR+++A +
Sbjct: 362 NVVTYSTMADGYAKAGRLEDALNLYNEMKFLGIGLDRVSYNTLLSIYAKLGRFEDALKVC 421
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
+ M SSG + +TY +L + + KF E VF + +K + P+ + +I +Y
Sbjct: 422 KEMGSSGVKKDVVTYNALLDGYGKQGKFNEVTRVFKEM---KKDRVFPNLLTYSTLIDVY 478
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSKIYDQMQRAGLQPDVVSY 274
K YE+A ++F + ++AGL+ DVV Y
Sbjct: 479 SKGSLYEEAMEVF--------------------------------REFKQAGLKADVVLY 506
Query: 275 ALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVD-QARTVFKCMR 333
+ LINA K + A+ + +EM G+RP YN ++DAF S + V
Sbjct: 507 SELINALCKNGLVDSAVLLLDEMTKEGIRPNVVTYNSIIDAFGRSTTAEFLVDGVGASNE 566
Query: 334 RDRCSPDICSYTTMLSAYVNASDMEGAE----KFFRRLKQDGFVPNVITYGTLIKGYAKV 389
R SP T ML V+ S++ + KF+++L + +G AK
Sbjct: 567 RQSESP-----TFMLIEGVDESEINWDDGHVFKFYQQLVSEK------------EGPAKK 609
Query: 390 NNLEK-----MMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEM 437
L K ++ ++ KM IKPN F+ I++A + K + A + +E+
Sbjct: 610 ERLGKEEIRSILSVFKKMHELEIKPNVVTFSAILNACSRCKSIEDASMLLEEL 662
Score = 78.6 bits (192), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 48/163 (29%), Positives = 83/163 (50%), Gaps = 13/163 (7%)
Query: 94 FNEMDFL----------MLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGR 143
+NEM FL L++ Y K G F A KV M G VV++ AL++ YG+
Sbjct: 386 YNEMKFLGIGLDRVSYNTLLSIYAKLGRFEDALKVCKEMGSSGVKKDVVTYNALLDGYGK 445
Query: 144 GGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPD 203
G++ +F+ M+ P+ LTY ++ ++ + + ++EA EVF +++ LK D
Sbjct: 446 QGKFNEVTRVFKEMKKDRVFPNLLTYSTLIDVYSKGSLYEEAMEVFREF---KQAGLKAD 502
Query: 204 QKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLM 246
++ +I K G + A L M + G++ + VTYNS++
Sbjct: 503 VVLYSELINALCKNGLVDSAVLLLDEMTKEGIRPNVVTYNSII 545
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 63/130 (48%), Gaps = 5/130 (3%)
Query: 345 TTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRV 404
+ M+S +E A+ F +G+ V + LI Y K ++ +++++ M+V
Sbjct: 191 SAMISTLGRLGKVELAKGVFETALSEGYGNTVFAFSALISAYGKSGYFDEAIKVFESMKV 250
Query: 405 NGIKPNQTIFTTIMDAYGKNK-DFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTAD--- 460
+G+KPN + ++DA GK +F V ++EM G PD+ N LL++
Sbjct: 251 SGLKPNLVTYNAVIDACGKGGVEFKRVVEIFEEMLRNGVQPDRITYNSLLAVCSRGGLWE 310
Query: 461 -ERNEANELL 469
RN NE++
Sbjct: 311 AARNLFNEMI 320
>gi|449436409|ref|XP_004135985.1| PREDICTED: pentatricopeptide repeat-containing protein At2g31400,
chloroplastic-like [Cucumis sativus]
Length = 868
Score = 172 bits (435), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 113/404 (27%), Positives = 203/404 (50%), Gaps = 11/404 (2%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
+I+ G+ G A+ V +GY +V + +AL+ AYG+ G + A +F M+ SG
Sbjct: 193 MISTLGRLGKVELAKGVFETALSEGYGNTVFAFSALISAYGKSGYFDEAIKVFESMKVSG 252
Query: 162 PRPSALTYQIILKLFVEAN-KFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGY 220
+P+ +TY ++ + +FK E+F +L ++ ++PD+ ++ ++ + + G +
Sbjct: 253 LKPNLVTYNAVIDACGKGGVEFKRVVEIFEEML---RNGVQPDRITYNSLLAVCSRGGLW 309
Query: 221 EKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSKIYD---QMQRAGLQPDVVSYALL 277
E AR LF M +RG+ Q TYN+L+ ++ Y+ +M + P+VV+Y+ +
Sbjct: 310 EAARNLFNEMIDRGIDQDVFTYNTLLDAVCKGGQMDLAYEIMLEMPGKKILPNVVTYSTM 369
Query: 278 INAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRC 337
+ Y KA R E+AL ++ EM G+ +YN LL +A G + A V K M
Sbjct: 370 ADGYAKAGRLEDALNLYNEMKFLGIGLDRVSYNTLLSIYAKLGRFEDALKVCKEMGSSGV 429
Query: 338 SPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMME 397
D+ +Y +L Y + F+ +K+D PN++TY TLI Y+K + E+ ME
Sbjct: 430 KKDVVTYNALLDGYGKQGKFNEVTRVFKEMKKDRVFPNLLTYSTLIDVYSKGSLYEEAME 489
Query: 398 IYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAK 457
++ + + G+K + +++ +++A KN DSAV+ EM G P+ N ++
Sbjct: 490 VFREFKQAGLKADVVLYSELINALCKNGLVDSAVLLLDEMTKEGIRPNVVTYNSIID--- 546
Query: 458 TADERNEANELLGNFNHPNNEPGINGLSISVDEEDDDDDDDEDD 501
A R+ E L + +NE S + E D+ + + DD
Sbjct: 547 -AFGRSTTAEFLVDGVGASNERQSESPSFMLIEGVDESEINWDD 589
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 85/349 (24%), Positives = 146/349 (41%), Gaps = 54/349 (15%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + + + Y K G A + + M G VS+ L+ Y + GR+++A +
Sbjct: 362 NVVTYSTMADGYAKAGRLEDALNLYNEMKFLGIGLDRVSYNTLLSIYAKLGRFEDALKVC 421
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
+ M SSG + +TY +L + + KF E VF + +K + P+ + +I +Y
Sbjct: 422 KEMGSSGVKKDVVTYNALLDGYGKQGKFNEVTRVFKEM---KKDRVFPNLLTYSTLIDVY 478
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSKIYDQMQRAGLQPDVVSY 274
K YE+A ++F + ++AGL+ DVV Y
Sbjct: 479 SKGSLYEEAMEVF--------------------------------REFKQAGLKADVVLY 506
Query: 275 ALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVD-QARTVFKCMR 333
+ LINA K + A+ + +EM G+RP YN ++DAF S + V
Sbjct: 507 SELINALCKNGLVDSAVLLLDEMTKEGIRPNVVTYNSIIDAFGRSTTAEFLVDGVGASNE 566
Query: 334 RDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLE 393
R SP + + +N D KF+++L + +G AK L
Sbjct: 567 RQSESPSFMLIEGVDESEINWDDGH-VFKFYQQLVSEK------------EGPAKKERLG 613
Query: 394 K-----MMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEM 437
K ++ ++ KM IKPN F+ I++A + K + A + +E+
Sbjct: 614 KEEIRSILSVFKKMHELEIKPNVVTFSAILNACSRCKSIEDASMLLEEL 662
Score = 78.6 bits (192), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 48/163 (29%), Positives = 83/163 (50%), Gaps = 13/163 (7%)
Query: 94 FNEMDFL----------MLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGR 143
+NEM FL L++ Y K G F A KV M G VV++ AL++ YG+
Sbjct: 386 YNEMKFLGIGLDRVSYNTLLSIYAKLGRFEDALKVCKEMGSSGVKKDVVTYNALLDGYGK 445
Query: 144 GGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPD 203
G++ +F+ M+ P+ LTY ++ ++ + + ++EA EVF +++ LK D
Sbjct: 446 QGKFNEVTRVFKEMKKDRVFPNLLTYSTLIDVYSKGSLYEEAMEVFREF---KQAGLKAD 502
Query: 204 QKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLM 246
++ +I K G + A L M + G++ + VTYNS++
Sbjct: 503 VVLYSELINALCKNGLVDSAVLLLDEMTKEGIRPNVVTYNSII 545
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 63/130 (48%), Gaps = 5/130 (3%)
Query: 345 TTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRV 404
+ M+S +E A+ F +G+ V + LI Y K ++ +++++ M+V
Sbjct: 191 SAMISTLGRLGKVELAKGVFETALSEGYGNTVFAFSALISAYGKSGYFDEAIKVFESMKV 250
Query: 405 NGIKPNQTIFTTIMDAYGKNK-DFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTAD--- 460
+G+KPN + ++DA GK +F V ++EM G PD+ N LL++
Sbjct: 251 SGLKPNLVTYNAVIDACGKGGVEFKRVVEIFEEMLRNGVQPDRITYNSLLAVCSRGGLWE 310
Query: 461 -ERNEANELL 469
RN NE++
Sbjct: 311 AARNLFNEMI 320
>gi|297739653|emb|CBI29835.3| unnamed protein product [Vitis vinifera]
Length = 852
Score = 172 bits (435), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 128/537 (23%), Positives = 238/537 (44%), Gaps = 112/537 (20%)
Query: 28 KKNWRRLMNQIEEVGS---AVAVLRSERTRGQPLPKDLVLGTLVRLK------------- 71
+KN+ L+ +I ++GS +V V R + + ++ + ++RL
Sbjct: 126 RKNFPLLIREITQIGSLEHSVQVFRWMKNQKNYCARNDIYNMMIRLHARHNIVDQARGLF 185
Query: 72 -QLKKWNVV--SEVLEWL-----RIQSW-WDFNEMDFLM-------------LITAYGKQ 109
+++KW +E L R W W N MD ++ LI A G
Sbjct: 186 FEMQKWRCKPDAETYNALINAHGRAGQWRWAMNIMDDMLRAAIPPSRSTYNNLINACGSS 245
Query: 110 GDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTY 169
G++ +A V M + G P +V+H ++ AY RG +Y + F M+ + RP T
Sbjct: 246 GNWKEALNVCKKMTENGVGPDLVTHNIVLSAYKRGNQYSKVLSYFELMKGTNIRPDTTTL 305
Query: 170 QIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFAL 229
I++ V+ + +A ++F ++ E++S PD F +I++Y G E + F
Sbjct: 306 NIVIYCLVKLGQNGKAIDIFNSM-KEKRSECYPDVVTFTTIIHLYSVCGQIENCQTAFNT 364
Query: 230 MAERGVQQSTVTYNSLMSFETNY---KEVSKIYDQMQRAGLQPDVVSYALLINAYGKARR 286
M G++ + V+YN+L+ ++ KE +++++++ G PDVVSY L+NAYGK+ +
Sbjct: 365 MLAEGLKPNIVSYNALIGAYASHGMDKEAFSVFNEIKKNGFHPDVVSYTSLLNAYGKSGK 424
Query: 287 EEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTT 346
E+A+ VFE M +P +YN L+DA+ G++ +A + M R+ P+I S T
Sbjct: 425 PEKAMKVFELMRRNHCKPNLVSYNALIDAYGSKGLLTEAVEILHEMERNGVQPNIVSICT 484
Query: 347 MLSA-----------------------------------YVNASDMEGAEKFFRRLKQDG 371
+L+A Y++ + + A +R ++
Sbjct: 485 LLAACGRCGQKVKIKSVLSAAELRGIKLNTTAYNSAIGSYLSVGEYDKALSLYRAMRTKK 544
Query: 372 FVPNVITYGTLIKGYAKVNN-------LEKMMEI-------------------------- 398
P+ +TY LI G K++ L++MM++
Sbjct: 545 VKPDPVTYNVLISGCCKMSKYGEALGFLDEMMDLKIPLSKEVYSSVICAYSKQGQVTEAE 604
Query: 399 --YDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILL 453
+ KM++ G +P+ +T ++ AY ++++ A + EME+ PD A + L+
Sbjct: 605 SMFTKMKMVGCRPDVITYTAMIHAYDVAENWEKASALFLEMETDDVQPDSIACSSLM 661
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 90/347 (25%), Positives = 174/347 (50%), Gaps = 6/347 (1%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + + LI AY G +A V + + K G+ P VVS+T+L+ AYG+ G+ + A +F
Sbjct: 373 NIVSYNALIGAYASHGMDKEAFSVFNEIKKNGFHPDVVSYTSLLNAYGKSGKPEKAMKVF 432
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
M+ + +P+ ++Y ++ + EA E+ L + E++ ++P+ ++
Sbjct: 433 ELMRRNHCKPNLVSYNALIDAYGSKGLLTEAVEI---LHEMERNGVQPNIVSICTLLAAC 489
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSK---IYDQMQRAGLQPDV 271
+ G K + + + RG++ +T YNS + + E K +Y M+ ++PD
Sbjct: 490 GRCGQKVKIKSVLSAAELRGIKLNTTAYNSAIGSYLSVGEYDKALSLYRAMRTKKVKPDP 549
Query: 272 VSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKC 331
V+Y +LI+ K + EAL +EM+D + + + Y+ ++ A++ G V +A ++F
Sbjct: 550 VTYNVLISGCCKMSKYGEALGFLDEMMDLKIPLSKEVYSSVICAYSKQGQVTEAESMFTK 609
Query: 332 MRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNN 391
M+ C PD+ +YT M+ AY A + E A F ++ D P+ I +L++ + K
Sbjct: 610 MKMVGCRPDVITYTAMIHAYDVAENWEKASALFLEMETDDVQPDSIACSSLMRAFNKGGQ 669
Query: 392 LEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEME 438
K++ + + MR I N + F ++ A +++ + K ME
Sbjct: 670 PAKVLVLAEFMREKKIPFNNSSFFEMVSACSLLREWREIIGLIKLME 716
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 77/318 (24%), Positives = 155/318 (48%), Gaps = 8/318 (2%)
Query: 169 YQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFA 228
Y ++++L N +A +F + +K KPD + ++ +I + +AG + A +
Sbjct: 165 YNMMIRLHARHNIVDQARGLFFEM---QKWRCKPDAETYNALINAHGRAGQWRWAMNIMD 221
Query: 229 LMAERGVQQSTVTYNSLMSF---ETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKAR 285
M + S TYN+L++ N+KE + +M G+ PD+V++ ++++AY +
Sbjct: 222 DMLRAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTENGVGPDLVTHNIVLSAYKRGN 281
Query: 286 REEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMR--RDRCSPDICS 343
+ + L+ FE M +RP NI++ G +A +F M+ R C PD+ +
Sbjct: 282 QYSKVLSYFELMKGTNIRPDTTTLNIVIYCLVKLGQNGKAIDIFNSMKEKRSECYPDVVT 341
Query: 344 YTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMR 403
+TT++ Y +E + F + +G PN+++Y LI YA ++ ++++++
Sbjct: 342 FTTIIHLYSVCGQIENCQTAFNTMLAEGLKPNIVSYNALIGAYASHGMDKEAFSVFNEIK 401
Query: 404 VNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERN 463
NG P+ +T++++AYGK+ + A+ ++ M P+ + N L+ +
Sbjct: 402 KNGFHPDVVSYTSLLNAYGKSGKPEKAMKVFELMRRNHCKPNLVSYNALIDAYGSKGLLT 461
Query: 464 EANELLGNFNHPNNEPGI 481
EA E+L +P I
Sbjct: 462 EAVEILHEMERNGVQPNI 479
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 92/403 (22%), Positives = 159/403 (39%), Gaps = 77/403 (19%)
Query: 97 MDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRR 156
+ + L+ AYGK G KA KV M + P++VS+ AL++AYG G A I
Sbjct: 410 VSYTSLLNAYGKSGKPEKAMKVFELMRRNHCKPNLVSYNALIDAYGSKGLLTEAVEILHE 469
Query: 157 MQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKK 216
M+ +G +P+ ++ I L + + ++ L E +K + ++ I Y
Sbjct: 470 MERNGVQPNIVS---ICTLLAACGRCGQKVKIKSVLSAAELRGIKLNTTAYNSAIGSYLS 526
Query: 217 AGGYEKARKLFALMAERGVQQSTVTYNSLMSF---------------------------- 248
G Y+KA L+ M + V+ VTYN L+S
Sbjct: 527 VGEYDKALSLYRAMRTKKVKPDPVTYNVLISGCCKMSKYGEALGFLDEMMDLKIPLSKEV 586
Query: 249 ----------ETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEML 298
+ E ++ +M+ G +PDV++Y +I+AY A E+A A+F EM
Sbjct: 587 YSSVICAYSKQGQVTEAESMFTKMKMVGCRPDVITYTAMIHAYDVAENWEKASALFLEME 646
Query: 299 DAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYV------ 352
V+P A + L+ AF G + + + MR + + S+ M+SA
Sbjct: 647 TDDVQPDSIACSSLMRAFNKGGQPAKVLVLAEFMREKKIPFNNSSFFEMVSACSLLREWR 706
Query: 353 -----------------------------NASDMEGAEKFFRRLKQDGFVPNVITYGTLI 383
+ +E K F ++ G N TY L+
Sbjct: 707 EIIGLIKLMEPSISVVSIGLLNQLLHFLGKSGKIETMMKLFYKIVASGAEINFYTYSILL 766
Query: 384 KGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKD 426
K N K +E+ M G++P+ ++ +I ++ +N+
Sbjct: 767 KNLLAAGNWRKYIEVLQWMEEAGLQPSVGMYRSI-SSFAQNRS 808
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 71/297 (23%), Positives = 137/297 (46%), Gaps = 7/297 (2%)
Query: 163 RPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEK 222
R S + ++++ + + + +VF + +++ + D +++MMI ++ + ++
Sbjct: 123 RFSRKNFPLLIREITQIGSLEHSVQVFRWMKNQKNYCARND--IYNMMIRLHARHNIVDQ 180
Query: 223 ARKLFALMAERGVQQSTVTYNSLMSFET---NYKEVSKIYDQMQRAGLQPDVVSYALLIN 279
AR LF M + + TYN+L++ ++ I D M RA + P +Y LIN
Sbjct: 181 ARGLFFEMQKWRCKPDAETYNALINAHGRAGQWRWAMNIMDDMLRAAIPPSRSTYNNLIN 240
Query: 280 AYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSP 339
A G + +EAL V ++M + GV P +NI+L A+ + + F+ M+ P
Sbjct: 241 ACGSSGNWKEALNVCKKMTENGVGPDLVTHNIVLSAYKRGNQYSKVLSYFELMKGTNIRP 300
Query: 340 DICSYTTMLSAYVNASDMEGAEKFFRRLKQ--DGFVPNVITYGTLIKGYAKVNNLEKMME 397
D + ++ V A F +K+ P+V+T+ T+I Y+ +E
Sbjct: 301 DTTTLNIVIYCLVKLGQNGKAIDIFNSMKEKRSECYPDVVTFTTIIHLYSVCGQIENCQT 360
Query: 398 IYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLS 454
++ M G+KPN + ++ AY + A + E++ GF PD + LL+
Sbjct: 361 AFNTMLAEGLKPNIVSYNALIGAYASHGMDKEAFSVFNEIKKNGFHPDVVSYTSLLN 417
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 50/217 (23%), Positives = 85/217 (39%), Gaps = 36/217 (16%)
Query: 273 SYALLINAYGKARREEEALAVFEEMLD-AGVRPTHKAYNILLDAFAISGMVDQARTVFKC 331
++ LLI + E ++ VF M + + YN+++ A +VDQAR +F
Sbjct: 128 NFPLLIREITQIGSLEHSVQVFRWMKNQKNYCARNDIYNMMIRLHARHNIVDQARGLFFE 187
Query: 332 MRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNN 391
M++ RC PD AE TY LI + +
Sbjct: 188 MQKWRCKPD-------------------AE----------------TYNALINAHGRAGQ 212
Query: 392 LEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNI 451
M I D M I P+++ + +++A G + ++ A+ K+M G PD NI
Sbjct: 213 WRWAMNIMDDMLRAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTENGVGPDLVTHNI 272
Query: 452 LLSLAKTADERNEANELLGNFNHPNNEPGINGLSISV 488
+LS K ++ ++ N P L+I +
Sbjct: 273 VLSAYKRGNQYSKVLSYFELMKGTNIRPDTTTLNIVI 309
Score = 38.5 bits (88), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 40/188 (21%), Positives = 79/188 (42%), Gaps = 27/188 (14%)
Query: 46 AVLRSERTRGQPLPKDLVLGTLVRLKQLKKWNVVSEVLEWLRIQSWWDFNEMDFLMLITA 105
+++R+ GQP K LVL +R K++ FN F +++A
Sbjct: 659 SLMRAFNKGGQP-AKVLVLAEFMREKKI-------------------PFNNSSFFEMVSA 698
Query: 106 YGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPS 165
++ + ++ M S+ L+ G+ G+ + +F ++ +SG +
Sbjct: 699 CSLLREWREIIGLIKLMEPSISVVSIGLLNQLLHFLGKSGKIETMMKLFYKIVASGAEIN 758
Query: 166 ALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARK 225
TY I+LK + A +++ EV + E++ L+P M+ + + G E A
Sbjct: 759 FYTYSILLKNLLAAGNWRKYIEVLQWM---EEAGLQPSVGMYRSISSFAQNRSGAEYA-- 813
Query: 226 LFALMAER 233
A++ ER
Sbjct: 814 --AVIQER 819
>gi|449438627|ref|XP_004137089.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g02860-like [Cucumis sativus]
Length = 831
Score = 172 bits (435), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 105/386 (27%), Positives = 190/386 (49%), Gaps = 21/386 (5%)
Query: 101 MLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSS 160
++I+ GK+G + A +L + G + ++T+L+ AY GRY+ A +F++++
Sbjct: 190 VIISVLGKEGRASFAASLLHDLRNDGVHIDIYAYTSLITAYASNGRYREAVMVFKKLEEE 249
Query: 161 GPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSP-LKPDQKMFHMMIYMYKKAGG 219
G RP+ +TY +IL ++ K L+D KS + PD ++ +I ++
Sbjct: 250 GCRPTLITYNVILNVY---GKMGMPWSKIAGLVDSMKSSGVAPDLYTYNTLISSCRRGSL 306
Query: 220 YEKARKLFALMAERGVQQSTVTYNSLMSF---ETNYKEVSKIYDQMQRAGLQPDVVSYAL 276
YE+A ++F M G VTYN+L+ +E ++ +M+ +G P +V+Y
Sbjct: 307 YEEAAEVFEEMKAAGFSPDKVTYNALLDVYGKSRRPREAMEVLKEMEASGFAPSIVTYNS 366
Query: 277 LINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDR 336
LI+AY + +EA+ + +M+ G++P Y LL F +G D A VF+ MR
Sbjct: 367 LISAYARDGLLDEAMELKSQMVKKGIKPDVFTYTTLLSGFEKTGKDDYAMKVFEEMRVAG 426
Query: 337 CSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMM 396
C P+IC++ ++ + N + K F +K VP+++T+ TL+ + + ++
Sbjct: 427 CQPNICTFNALIKMHGNRGNFVEMMKVFEEIKICECVPDIVTWNTLLAVFGQNGMDSEVS 486
Query: 397 EIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLS-- 454
++ +M+ G P + F T++ AY + FD A+ Y+ M G PD N +L+
Sbjct: 487 GVFKEMKRAGFVPERDTFNTLISAYSRCGFFDQAMAIYRRMLDAGVTPDLSTYNAVLAAL 546
Query: 455 ------------LAKTADERNEANEL 468
LA+ D R + NEL
Sbjct: 547 ARGGLWEQSEKVLAEMKDGRCKPNEL 572
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 98/374 (26%), Positives = 187/374 (50%), Gaps = 7/374 (1%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
LI++ + + +A +V M G++P V++ AL++ YG+ R + A + + M++SG
Sbjct: 297 LISSCRRGSLYEEAAEVFEEMKAAGFSPDKVTYNALLDVYGKSRRPREAMEVLKEMEASG 356
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
PS +TY ++ + EA E+ ++ K +KPD + ++ ++K G +
Sbjct: 357 FAPSIVTYNSLISAYARDGLLDEAMELKSQMV---KKGIKPDVFTYTTLLSGFEKTGKDD 413
Query: 222 KARKLFALMAERGVQQSTVTYNSLMSFETN---YKEVSKIYDQMQRAGLQPDVVSYALLI 278
A K+F M G Q + T+N+L+ N + E+ K++++++ PD+V++ L+
Sbjct: 414 YAMKVFEEMRVAGCQPNICTFNALIKMHGNRGNFVEMMKVFEEIKICECVPDIVTWNTLL 473
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCS 338
+G+ + E VF+EM AG P +N L+ A++ G DQA +++ M +
Sbjct: 474 AVFGQNGMDSEVSGVFKEMKRAGFVPERDTFNTLISAYSRCGFFDQAMAIYRRMLDAGVT 533
Query: 339 PDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEI 398
PD+ +Y +L+A E +EK +K PN +TY +L+ YA +E+M +
Sbjct: 534 PDLSTYNAVLAALARGGLWEQSEKVLAEMKDGRCKPNELTYCSLLHAYANGKEVERMSAL 593
Query: 399 YDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKT 458
+++ I+P + T++ Y K+ + E+ GF PD N ++S+
Sbjct: 594 AEEIYSGIIEPQAVLLKTLVLVYSKSDLLTETERAFLELREQGFSPDITTLNAMVSIYGR 653
Query: 459 ADERNEANELLGNF 472
++ NE+L NF
Sbjct: 654 RRMVSKTNEIL-NF 666
Score = 155 bits (393), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 121/486 (24%), Positives = 224/486 (46%), Gaps = 49/486 (10%)
Query: 13 RRKVEVFKDAADEAGKKN---WRRLMNQIEEVG---SAVAVLRSERTRGQPLPKDLVLGT 66
R V VFK +E + + ++N ++G S +A L P T
Sbjct: 237 REAVMVFKKLEEEGCRPTLITYNVILNVYGKMGMPWSKIAGLVDSMKSSGVAPDLYTYNT 296
Query: 67 LVR-LKQLKKWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKK 125
L+ ++ + +EV E ++ + + +++ + L+ YGK +A +VL M
Sbjct: 297 LISSCRRGSLYEEAAEVFEEMK-AAGFSPDKVTYNALLDVYGKSRRPREAMEVLKEMEAS 355
Query: 126 GYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEA 185
G+APS+V++ +L+ AY R G A + +M G +P TY +L F + K A
Sbjct: 356 GFAPSIVTYNSLISAYARDGLLDEAMELKSQMVKKGIKPDVFTYTTLLSGFEKTGKDDYA 415
Query: 186 EEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSL 245
+VF + + +P+ F+ +I M+ G + + K+F + VT+N+L
Sbjct: 416 MKVFEEM---RVAGCQPNICTFNALIKMHGNRGNFVEMMKVFEEIKICECVPDIVTWNTL 472
Query: 246 MS-FETNY--KEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGV 302
++ F N EVS ++ +M+RAG P+ ++ LI+AY + ++A+A++ MLDAGV
Sbjct: 473 LAVFGQNGMDSEVSGVFKEMKRAGFVPERDTFNTLISAYSRCGFFDQAMAIYRRMLDAGV 532
Query: 303 RPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEG--- 359
P YN +L A A G+ +Q+ V M+ RC P+ +Y ++L AY N ++E
Sbjct: 533 TPDLSTYNAVLAALARGGLWEQSEKVLAEMKDGRCKPNELTYCSLLHAYANGKEVERMSA 592
Query: 360 --------------------------------AEKFFRRLKQDGFVPNVITYGTLIKGYA 387
E+ F L++ GF P++ T ++ Y
Sbjct: 593 LAEEIYSGIIEPQAVLLKTLVLVYSKSDLLTETERAFLELREQGFSPDITTLNAMVSIYG 652
Query: 388 KVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQK 447
+ + K EI + ++ +G P+ T + ++M Y + + F+ + +E+ + G PD
Sbjct: 653 RRRMVSKTNEILNFIKDSGFTPSLTTYNSLMYMYSRTEHFEKSEDILREIIAKGMKPDII 712
Query: 448 AKNILL 453
+ N ++
Sbjct: 713 SFNTVI 718
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 91/388 (23%), Positives = 179/388 (46%), Gaps = 35/388 (9%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
LI+AY + G ++A ++ S M KKG P V ++T L+ + + G+ A +F M+ +G
Sbjct: 367 LISAYARDGLLDEAMELKSQMVKKGIKPDVFTYTTLLSGFEKTGKDDYAMKVFEEMRVAG 426
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVF---------------MTLL------------- 193
+P+ T+ ++K+ F E +VF TLL
Sbjct: 427 CQPNICTFNALIKMHGNRGNFVEMMKVFEEIKICECVPDIVTWNTLLAVFGQNGMDSEVS 486
Query: 194 ----DEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFE 249
+ +++ P++ F+ +I Y + G +++A ++ M + GV TYN++++
Sbjct: 487 GVFKEMKRAGFVPERDTFNTLISAYSRCGFFDQAMAIYRRMLDAGVTPDLSTYNAVLAAL 546
Query: 250 TN---YKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTH 306
+++ K+ +M+ +P+ ++Y L++AY + E A+ EE+ + P
Sbjct: 547 ARGGLWEQSEKVLAEMKDGRCKPNELTYCSLLHAYANGKEVERMSALAEEIYSGIIEPQA 606
Query: 307 KAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRR 366
L+ ++ S ++ + F +R SPDI + M+S Y + +
Sbjct: 607 VLLKTLVLVYSKSDLLTETERAFLELREQGFSPDITTLNAMVSIYGRRRMVSKTNEILNF 666
Query: 367 LKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKD 426
+K GF P++ TY +L+ Y++ + EK +I ++ G+KP+ F T++ AY +N
Sbjct: 667 IKDSGFTPSLTTYNSLMYMYSRTEHFEKSEDILREIIAKGMKPDIISFNTVIFAYCRNGR 726
Query: 427 FDSAVVWYKEMESCGFPPDQKAKNILLS 454
A + EM+ G PD N ++
Sbjct: 727 MKEASRIFAEMKDFGLAPDVITYNTFIA 754
Score = 132 bits (331), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 92/414 (22%), Positives = 186/414 (44%), Gaps = 14/414 (3%)
Query: 81 EVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEA 140
+V E +R+ N F LI +G +G+F + KV + P +V+ L+
Sbjct: 417 KVFEEMRVAGCQP-NICTFNALIKMHGNRGNFVEMMKVFEEIKICECVPDIVTWNTLLAV 475
Query: 141 YGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPL 200
+G+ G +F+ M+ +G P T+ ++ + F +A ++ +LD + +
Sbjct: 476 FGQNGMDSEVSGVFKEMKRAGFVPERDTFNTLISAYSRCGFFDQAMAIYRRMLD---AGV 532
Query: 201 KPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEV---SK 257
PD ++ ++ + G +E++ K+ A M + + + +TY SL+ N KEV S
Sbjct: 533 TPDLSTYNAVLAALARGGLWEQSEKVLAEMKDGRCKPNELTYCSLLHAYANGKEVERMSA 592
Query: 258 IYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFA 317
+ +++ ++P V L+ Y K+ E F E+ + G P N ++ +
Sbjct: 593 LAEEIYSGIIEPQAVLLKTLVLVYSKSDLLTETERAFLELREQGFSPDITTLNAMVSIYG 652
Query: 318 ISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVI 377
MV + + ++ +P + +Y +++ Y E +E R + G P++I
Sbjct: 653 RRRMVSKTNEILNFIKDSGFTPSLTTYNSLMYMYSRTEHFEKSEDILREIIAKGMKPDII 712
Query: 378 TYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEM 437
++ T+I Y + +++ I+ +M+ G+ P+ + T + +Y + F A+ K M
Sbjct: 713 SFNTVIFAYCRNGRMKEASRIFAEMKDFGLAPDVITYNTFIASYASDSMFIEAIDVVKYM 772
Query: 438 ESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGINGLSISVDEE 491
G P+Q N L+ + R+EA+ + N N +P S++ DEE
Sbjct: 773 IKNGCKPNQNTYNSLIDWFCKLNRRDEASSFISNLR--NLDP-----SVTKDEE 819
>gi|449530359|ref|XP_004172163.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g02860-like [Cucumis sativus]
Length = 831
Score = 171 bits (434), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 105/386 (27%), Positives = 190/386 (49%), Gaps = 21/386 (5%)
Query: 101 MLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSS 160
++I+ GK+G + A +L + G + ++T+L+ AY GRY+ A +F++++
Sbjct: 190 VIISVLGKEGRASFAASLLHDLRNDGVHIDIYAYTSLITAYASNGRYREAVMVFKKLEEE 249
Query: 161 GPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSP-LKPDQKMFHMMIYMYKKAGG 219
G RP+ +TY +IL ++ K L+D KS + PD ++ +I ++
Sbjct: 250 GCRPTLITYNVILNVY---GKMGMPWSKIAGLVDSMKSSGVAPDLYTYNTLISSCRRGSL 306
Query: 220 YEKARKLFALMAERGVQQSTVTYNSLMSF---ETNYKEVSKIYDQMQRAGLQPDVVSYAL 276
YE+A ++F M G VTYN+L+ +E ++ +M+ +G P +V+Y
Sbjct: 307 YEEAAEVFEEMKAAGFSPDKVTYNALLDVYGKSRRPREAMEVLKEMEASGFAPSIVTYNS 366
Query: 277 LINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDR 336
LI+AY + +EA+ + +M+ G++P Y LL F +G D A VF+ MR
Sbjct: 367 LISAYARDGLLDEAMELKSQMVKKGIKPDVFTYTTLLSGFEKTGKDDYAMKVFEEMRVAG 426
Query: 337 CSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMM 396
C P+IC++ ++ + N + K F +K VP+++T+ TL+ + + ++
Sbjct: 427 CQPNICTFNALIKMHGNRGNFVEMMKVFEEIKICECVPDIVTWNTLLAVFGQNGMDSEVS 486
Query: 397 EIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLS-- 454
++ +M+ G P + F T++ AY + FD A+ Y+ M G PD N +L+
Sbjct: 487 GVFKEMKRAGFVPERDTFNTLISAYSRCGFFDQAMAIYRRMLDAGVTPDLSTYNAVLAAL 546
Query: 455 ------------LAKTADERNEANEL 468
LA+ D R + NEL
Sbjct: 547 ARGGLWEQSEKVLAEMKDGRCKPNEL 572
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 98/374 (26%), Positives = 187/374 (50%), Gaps = 7/374 (1%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
LI++ + + +A +V M G++P V++ AL++ YG+ R + A + + M++SG
Sbjct: 297 LISSCRRGSLYEEAAEVFEEMKAAGFSPDKVTYNALLDVYGKSRRPREAMEVLKEMEASG 356
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
PS +TY ++ + EA E+ ++ K +KPD + ++ ++K G +
Sbjct: 357 FAPSIVTYNSLISAYARDGLLDEAMELKSQMV---KKGIKPDVFTYTTLLSGFEKTGKDD 413
Query: 222 KARKLFALMAERGVQQSTVTYNSLMSFETN---YKEVSKIYDQMQRAGLQPDVVSYALLI 278
A K+F M G Q + T+N+L+ N + E+ K++++++ PD+V++ L+
Sbjct: 414 YAMKVFEEMRVAGCQPNICTFNALIKMHGNRGNFVEMMKVFEEIKICECVPDIVTWNTLL 473
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCS 338
+G+ + E VF+EM AG P +N L+ A++ G DQA +++ M +
Sbjct: 474 AVFGQNGMDSEVSGVFKEMKRAGFVPERDTFNTLISAYSRCGFFDQAMAIYRRMLDAGVT 533
Query: 339 PDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEI 398
PD+ +Y +L+A E +EK +K PN +TY +L+ YA +E+M +
Sbjct: 534 PDLSTYNAVLAALARGGLWEQSEKVLAEMKDGRCKPNELTYCSLLHAYANGKEVERMSAL 593
Query: 399 YDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKT 458
+++ I+P + T++ Y K+ + E+ GF PD N ++S+
Sbjct: 594 AEEIYSGIIEPQAVLLKTLVLVYSKSDLLTETERAFLELREQGFSPDITTLNAMVSIYGR 653
Query: 459 ADERNEANELLGNF 472
++ NE+L NF
Sbjct: 654 RRMVSKTNEIL-NF 666
Score = 155 bits (393), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 121/486 (24%), Positives = 224/486 (46%), Gaps = 49/486 (10%)
Query: 13 RRKVEVFKDAADEAGKKN---WRRLMNQIEEVG---SAVAVLRSERTRGQPLPKDLVLGT 66
R V VFK +E + + ++N ++G S +A L P T
Sbjct: 237 REAVMVFKKLEEEGCRPTLITYNVILNVYGKMGMPWSKIAGLVDSMKSSGVAPDLYTYNT 296
Query: 67 LVR-LKQLKKWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKK 125
L+ ++ + +EV E ++ + + +++ + L+ YGK +A +VL M
Sbjct: 297 LISSCRRGSLYEEAAEVFEEMK-AAGFSPDKVTYNALLDVYGKSRRPREAMEVLKEMEAS 355
Query: 126 GYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEA 185
G+APS+V++ +L+ AY R G A + +M G +P TY +L F + K A
Sbjct: 356 GFAPSIVTYNSLISAYARDGLLDEAMELKSQMVKKGIKPDVFTYTTLLSGFEKTGKDDYA 415
Query: 186 EEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSL 245
+VF + + +P+ F+ +I M+ G + + K+F + VT+N+L
Sbjct: 416 MKVFEEM---RVAGCQPNICTFNALIKMHGNRGNFVEMMKVFEEIKICECVPDIVTWNTL 472
Query: 246 MS-FETNY--KEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGV 302
++ F N EVS ++ +M+RAG P+ ++ LI+AY + ++A+A++ MLDAGV
Sbjct: 473 LAVFGQNGMDSEVSGVFKEMKRAGFVPERDTFNTLISAYSRCGFFDQAMAIYRRMLDAGV 532
Query: 303 RPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEG--- 359
P YN +L A A G+ +Q+ V M+ RC P+ +Y ++L AY N ++E
Sbjct: 533 TPDLSTYNAVLAALARGGLWEQSEKVLAEMKDGRCKPNELTYCSLLHAYANGKEVERMSA 592
Query: 360 --------------------------------AEKFFRRLKQDGFVPNVITYGTLIKGYA 387
E+ F L++ GF P++ T ++ Y
Sbjct: 593 LAEEIYSGIIEPQAVLLKTLVLVYSKSDLLTETERAFLELREQGFSPDITTLNAMVSIYG 652
Query: 388 KVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQK 447
+ + K EI + ++ +G P+ T + ++M Y + + F+ + +E+ + G PD
Sbjct: 653 RRRMVSKTNEILNFIKDSGFTPSLTTYNSLMYMYSRTEHFEKSEDILREIIAKGMKPDII 712
Query: 448 AKNILL 453
+ N ++
Sbjct: 713 SFNTVI 718
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 91/388 (23%), Positives = 179/388 (46%), Gaps = 35/388 (9%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
LI+AY + G ++A ++ S M KKG P V ++T L+ + + G+ A +F M+ +G
Sbjct: 367 LISAYARDGLLDEAMELKSQMVKKGIKPDVFTYTTLLSGFEKTGKDDYAMKVFEEMRVAG 426
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVF---------------MTLL------------- 193
+P+ T+ ++K+ F E +VF TLL
Sbjct: 427 CQPNICTFNALIKMHGNRGNFVEMMKVFEEIKICECVPDIVTWNTLLAVFGQNGMDSEVS 486
Query: 194 ----DEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFE 249
+ +++ P++ F+ +I Y + G +++A ++ M + GV TYN++++
Sbjct: 487 GVFKEMKRAGFVPERDTFNTLISAYSRCGFFDQAMAIYRRMLDAGVTPDLSTYNAVLAAL 546
Query: 250 TN---YKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTH 306
+++ K+ +M+ +P+ ++Y L++AY + E A+ EE+ + P
Sbjct: 547 ARGGLWEQSEKVLAEMKDGRCKPNELTYCSLLHAYANGKEVERMSALAEEIYSGIIEPQA 606
Query: 307 KAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRR 366
L+ ++ S ++ + F +R SPDI + M+S Y + +
Sbjct: 607 VLLKTLVLVYSKSDLLTETERAFLELREQGFSPDITTLNAMVSIYGRRRMVSKTNEILNF 666
Query: 367 LKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKD 426
+K GF P++ TY +L+ Y++ + EK +I ++ G+KP+ F T++ AY +N
Sbjct: 667 IKDSGFTPSLTTYNSLMYMYSRTEHFEKSEDILREIIAKGMKPDIISFNTVIFAYCRNGR 726
Query: 427 FDSAVVWYKEMESCGFPPDQKAKNILLS 454
A + EM+ G PD N ++
Sbjct: 727 MKEASRIFAEMKDFGLAPDVITYNTFIA 754
Score = 125 bits (313), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 75/325 (23%), Positives = 150/325 (46%), Gaps = 6/325 (1%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
L+ +G+ G ++ V M + G+ P + L+ AY R G + A AI+RRM +G
Sbjct: 472 LLAVFGQNGMDSEVSGVFKEMKRAGFVPERDTFNTLISAYSRCGFFDQAMAIYRRMLDAG 531
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
P TY +L ++++E+V + D KP++ + +++ Y E
Sbjct: 532 VTPDLSTYNAVLAALARGGLWEQSEKVLAEMKDGR---CKPNELTYCSLLHAYANGKEVE 588
Query: 222 KARKLFALMAERGVQQSTVTYNSLMSFETN---YKEVSKIYDQMQRAGLQPDVVSYALLI 278
+ L + ++ V +L+ + E + + +++ G PD+ + ++
Sbjct: 589 RMSALAEEIYSGIIEPQAVLLKTLVLVYSKSDLLTETERAFLELREQGFSPDITTLNAMV 648
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCS 338
+ YG+ R + + + D+G P+ YN L+ ++ + +++ + + +
Sbjct: 649 SIYGRRRMVSKTNEILNFIKDSGFTPSLTTYNSLMYMYSRTEHFEKSEDILREIIAKGMK 708
Query: 339 PDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEI 398
PDI S+ T++ AY M+ A + F +K G P+VITY T I YA + + +++
Sbjct: 709 PDIISFNTVIFAYCRNGRMKEASRIFAEMKDFGLAPDVITYNTFIASYASDSMFIEAIDV 768
Query: 399 YDKMRVNGIKPNQTIFTTIMDAYGK 423
M N KPNQ + +++D + K
Sbjct: 769 VKYMIKNECKPNQNTYNSLIDWFCK 793
>gi|297805766|ref|XP_002870767.1| EMB2745 [Arabidopsis lyrata subsp. lyrata]
gi|297316603|gb|EFH47026.1| EMB2745 [Arabidopsis lyrata subsp. lyrata]
Length = 747
Score = 171 bits (434), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 123/458 (26%), Positives = 222/458 (48%), Gaps = 16/458 (3%)
Query: 29 KNWRRLMNQIEEVGSAVAVLRSERTRGQPLPKDLVLGTLVRLKQLKKW--NVVSEVLEWL 86
K++ RL I++ S V + ++ L + VL +R K+ + NV E+L
Sbjct: 142 KSYSRLC-LIDKALSIVHLSQAHGFMPGVLSYNAVLDATIRSKRNISFAENVFKEML--- 197
Query: 87 RIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGR 146
QS N + +LI + G+ + A + M KKG P+VV++ L++ Y + +
Sbjct: 198 --QSQVSPNVFTYNILIRGFCLAGNLDVALRFFDRMEKKGCLPNVVTYNTLIDGYCKLRK 255
Query: 147 YKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKM 206
+ + R M G P+ ++Y +++ + KE V L + K D+
Sbjct: 256 IDDGFELLRSMALKGLEPNLISYNVVINGLCREGRMKEISFV---LTEMNKRGYSLDEVT 312
Query: 207 FHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSL---MSFETNYKEVSKIYDQMQ 263
++ +I Y K G + +A + A M G+ S +TY SL M N ++ DQM+
Sbjct: 313 YNTLIKGYCKEGNFHQALVMHAEMLRHGLSPSVITYTSLIHSMCKAGNMNRATEFLDQMR 372
Query: 264 RAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVD 323
GL P+ +Y L++ + + EA V +EM+D G P+ YN L++ I+G +
Sbjct: 373 VRGLCPNERTYTTLVDGFSQKGYMNEAYRVLKEMIDNGFSPSVVTYNALINGHCIAGKMV 432
Query: 324 QARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLI 383
A V + M+ +PD+ SY+T+LS + + D++ A + R++ G P+ ITY +LI
Sbjct: 433 DAIAVLEDMKEKGLTPDVVSYSTVLSGFCRSYDVDEALRVKRKMVAKGIKPDTITYSSLI 492
Query: 384 KGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFP 443
+G+ + ++ +++D+M G+ P++ +T +++AY D A+ + EM G
Sbjct: 493 QGFCEQRRTKEACDLFDEMLRVGLPPDEFTYTALINAYCMEGDLQKAIQLHNEMVEKGVL 552
Query: 444 PDQKAKNILLS-LAKTADERNEANELLGNFNHPNNEPG 480
PD ++L++ L K A R EA LL + + P
Sbjct: 553 PDVVTYSVLINGLNKQARTR-EAKRLLLKLFYEESVPS 589
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 100/428 (23%), Positives = 186/428 (43%), Gaps = 61/428 (14%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + + ++I ++G + VL+ MNK+GY+ V++ L++ Y + G + A +
Sbjct: 274 NLISYNVVINGLCREGRMKEISFVLTEMNKRGYSLDEVTYNTLIKGYCKEGNFHQALVMH 333
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEK-SPLKPDQKMFHMMIYM 213
M G PS +TY ++ +A A E LD+ + L P+++ + ++
Sbjct: 334 AEMLRHGLSPSVITYTSLIHSMCKAGNMNRATE----FLDQMRVRGLCPNERTYTTLVDG 389
Query: 214 YKKAGGYEKARKLFALMAERGVQQSTVTYNSLM---SFETNYKEVSKIYDQMQRAGLQPD 270
+ + G +A ++ M + G S VTYN+L+ + + + M+ GL PD
Sbjct: 390 FSQKGYMNEAYRVLKEMIDNGFSPSVVTYNALINGHCIAGKMVDAIAVLEDMKEKGLTPD 449
Query: 271 VVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFK 330
VVSY+ +++ + ++ +EAL V +M+ G++P Y+ L+ F +A +F
Sbjct: 450 VVSYSTVLSGFCRSYDVDEALRVKRKMVAKGIKPDTITYSSLIQGFCEQRRTKEACDLFD 509
Query: 331 CMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAK-- 388
M R PD +YT +++AY D++ A + + + G +P+V+TY LI G K
Sbjct: 510 EMLRVGLPPDEFTYTALINAYCMEGDLQKAIQLHNEMVEKGVLPDVVTYSVLINGLNKQA 569
Query: 389 ------------------------------VNNLE--------------KMM----EIYD 400
+N+E MM ++++
Sbjct: 570 RTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFE 629
Query: 401 KMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTAD 460
M KP+ T + ++ + + D A YKEM GF +++L KT
Sbjct: 630 SMLEKNHKPDGTAYNVMIHGHCRGGDIRKAYSLYKEMVKSGFLLHTVT---VIALVKTLH 686
Query: 461 ERNEANEL 468
+ + NEL
Sbjct: 687 KEGKVNEL 694
Score = 121 bits (304), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 89/372 (23%), Positives = 172/372 (46%), Gaps = 26/372 (6%)
Query: 47 VLRSERTRGQPLPKDLVLGTLVR-LKQLKKWNVVSEVLEWLRIQSWWDFNEMDFLMLITA 105
V+ +E R P + +L+ + + N +E L+ +R++ NE + L+
Sbjct: 331 VMHAEMLRHGLSPSVITYTSLIHSMCKAGNMNRATEFLDQMRVRGLCP-NERTYTTLVDG 389
Query: 106 YGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPS 165
+ ++G N+A +VL M G++PSVV++ AL+ + G+ +A A+ M+ G P
Sbjct: 390 FSQKGYMNEAYRVLKEMIDNGFSPSVVTYNALINGHCIAGKMVDAIAVLEDMKEKGLTPD 449
Query: 166 ALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARK 225
++Y +L F + EA V ++ + +KPD + +I + + ++A
Sbjct: 450 VVSYSTVLSGFCRSYDVDEALRVKRKMVAK---GIKPDTITYSSLIQGFCEQRRTKEACD 506
Query: 226 LFALMAERGVQQSTVTYNSLM---SFETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYG 282
LF M G+ TY +L+ E + ++ +++++M G+ PDVV+Y++LIN
Sbjct: 507 LFDEMLRVGLPPDEFTYTALINAYCMEGDLQKAIQLHNEMVEKGVLPDVVTYSVLINGLN 566
Query: 283 KARREEEALAVFEEMLDAGVRPTHKAYNILLD---------------AFAISGMVDQART 327
K R EA + ++ P+ Y+ L++ F + GM+ +A
Sbjct: 567 KQARTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQ 626
Query: 328 VFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGY- 386
VF+ M PD +Y M+ + D+ A ++ + + GF+ + +T L+K
Sbjct: 627 VFESMLEKNHKPDGTAYNVMIHGHCRGGDIRKAYSLYKEMVKSGFLLHTVTVIALVKTLH 686
Query: 387 --AKVNNLEKMM 396
KVN L ++
Sbjct: 687 KEGKVNELNSVI 698
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 79/379 (20%), Positives = 156/379 (41%), Gaps = 24/379 (6%)
Query: 115 AEKVLSFMNKKGYAPSVVSHTALMEAYGRG--GRYKNAEAIFRRMQSSGP------RPSA 166
A+K L+F+ + Y +S EA N E I + + + P R
Sbjct: 25 ADKALTFLKRHPYQLHHLSANFTPEAASNLLLKSQNNQELILKFLTWANPHQFFTLRCKC 84
Query: 167 LTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPL------------KPDQKMFHMMIYMY 214
+T I+ + + AE+V LD+E + L +F +++ Y
Sbjct: 85 ITLHILTRFKLYKTAQTLAEDVAAKTLDDEDASLVFRSLQETYDLCNSTSSVFDLVVKSY 144
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKE----VSKIYDQMQRAGLQPD 270
+ +KA + L G ++YN+++ K ++ +M ++ + P+
Sbjct: 145 SRLCLIDKALSIVHLSQAHGFMPGVLSYNAVLDATIRSKRNISFAENVFKEMLQSQVSPN 204
Query: 271 VVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFK 330
V +Y +LI + A + AL F+ M G P YN L+D + +D + +
Sbjct: 205 VFTYNILIRGFCLAGNLDVALRFFDRMEKKGCLPNVVTYNTLIDGYCKLRKIDDGFELLR 264
Query: 331 CMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVN 390
M P++ SY +++ M+ + + G+ + +TY TLIKGY K
Sbjct: 265 SMALKGLEPNLISYNVVINGLCREGRMKEISFVLTEMNKRGYSLDEVTYNTLIKGYCKEG 324
Query: 391 NLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKN 450
N + + ++ +M +G+ P+ +T+++ + K + + A + +M G P+++
Sbjct: 325 NFHQALVMHAEMLRHGLSPSVITYTSLIHSMCKAGNMNRATEFLDQMRVRGLCPNERTYT 384
Query: 451 ILLSLAKTADERNEANELL 469
L+ NEA +L
Sbjct: 385 TLVDGFSQKGYMNEAYRVL 403
>gi|302806475|ref|XP_002984987.1| hypothetical protein SELMODRAFT_20977 [Selaginella moellendorffii]
gi|300147197|gb|EFJ13862.1| hypothetical protein SELMODRAFT_20977 [Selaginella moellendorffii]
Length = 471
Score = 171 bits (434), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 104/385 (27%), Positives = 201/385 (52%), Gaps = 14/385 (3%)
Query: 44 AVAVLRSERTRGQPLPKDLVLGTLV-RLKQLKKWNVVSEVLEWLRIQSWWDFNEMDFLML 102
A+ +L R RG P P + LV L +L +V++ + I+ + N M F L
Sbjct: 76 AMKLLEEMRERGCP-PNLVTYNVLVDALCKLSMVGAAQDVVKKM-IEGGFAPNVMTFNSL 133
Query: 103 ITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGP 162
+ + K+G+ + A K+L M KG P+VV+++AL++ + ++ A+ + M++SG
Sbjct: 134 VDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQKFLEAKEVLEEMKASGV 193
Query: 163 RPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEK 222
P A TY ++ +A+K +EAE++ + S PD ++ +I+ + K+G +
Sbjct: 194 TPDAFTYSALIHGLCKADKIEEAEQMLRRM---AGSGCTPDVVVYSSIIHAFCKSGKLLE 250
Query: 223 ARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSK---IYDQMQRAG-LQPDVVSYALLI 278
A+K M ++ VTYN+++ ++++ I DQMQ +G + PDVV+Y+ +I
Sbjct: 251 AQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILDQMQESGDVLPDVVTYSTVI 310
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCS 338
N K+ EA + + M AG P Y ++D G +++A + + M+R C+
Sbjct: 311 NGLCKSDMLVEAQKLLDRMCKAGCNPDVVTYTTIIDGLCKCGRLEEAEYLLQGMKRAGCA 370
Query: 339 PDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEI 398
P++ +YTT++S A ++ AE+ ++ G PN++TY T++ G +++ ++
Sbjct: 371 PNVVTYTTLISGLCKARKVDEAERVMEEMRNAGCPPNLVTYNTMVNGLCVSGRIKEAQQL 430
Query: 399 YDKMRVNG---IKPNQTIFTTIMDA 420
+M+ +G P+ + TI++A
Sbjct: 431 VQRMK-DGRAECSPDAATYRTIVNA 454
Score = 169 bits (427), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 104/397 (26%), Positives = 196/397 (49%), Gaps = 17/397 (4%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
+ITA GD + A + + G P+VV++TAL+ A+ R + + A + M+ G
Sbjct: 31 IITAMANAGDLDGA---MDHLRSMGCDPNVVTYTALIAAFARAKKLEEAMKLLEEMRERG 87
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
P+ +TY +++ + + A++V +++ P+ F+ ++ + K G +
Sbjct: 88 CPPNLVTYNVLVDALCKLSMVGAAQDVVKKMIE---GGFAPNVMTFNSLVDGFCKRGNVD 144
Query: 222 KARKLFALMAERGVQQSTVTYNSL---MSFETNYKEVSKIYDQMQRAGLQPDVVSYALLI 278
ARKL +M +G++ + VTY++L + + E ++ ++M+ +G+ PD +Y+ LI
Sbjct: 145 DARKLLGIMVAKGMRPNVVTYSALIDGLCKSQKFLEAKEVLEEMKASGVTPDAFTYSALI 204
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCS 338
+ KA + EEA + M +G P Y+ ++ AF SG + +A+ + MR+ R S
Sbjct: 205 HGLCKADKIEEAEQMLRRMAGSGCTPDVVVYSSIIHAFCKSGKLLEAQKTLQEMRKQRKS 264
Query: 339 PDICSYTTMLSAYVNASDMEGAEKFFRRLKQDG-FVPNVITYGTLIKGYAKVNNLEKMME 397
PD+ +Y T++ + A+ ++++ G +P+V+TY T+I G K + L + +
Sbjct: 265 PDVVTYNTVIDGLCKLGKIAEAQVILDQMQESGDVLPDVVTYSTVINGLCKSDMLVEAQK 324
Query: 398 IYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLS--- 454
+ D+M G P+ +TTI+D K + A + M+ G P+ L+S
Sbjct: 325 LLDRMCKAGCNPDVVTYTTIIDGLCKCGRLEEAEYLLQGMKRAGCAPNVVTYTTLISGLC 384
Query: 455 LAKTADERNEANELLGNFNHPNN----EPGINGLSIS 487
A+ DE E + N P N +NGL +S
Sbjct: 385 KARKVDEAERVMEEMRNAGCPPNLVTYNTMVNGLCVS 421
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 93/377 (24%), Positives = 175/377 (46%), Gaps = 12/377 (3%)
Query: 110 GDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTY 169
GD + A ++L M G+AP +HT ++ A G A ++S G P+ +TY
Sbjct: 4 GDLHAALELLEEMKSAGFAPDAFTHTPIITAMANAGDLDGA---MDHLRSMGCDPNVVTY 60
Query: 170 QIILKLFVEANKFKEAEEVFMTLLDEEKS-PLKPDQKMFHMMIYMYKKAGGYEKARKLFA 228
++ F A K +EA M LL+E + P+ +++++ K A+ +
Sbjct: 61 TALIAAFARAKKLEEA----MKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVK 116
Query: 229 LMAERGVQQSTVTYNSLM---SFETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKAR 285
M E G + +T+NSL+ N + K+ M G++P+VV+Y+ LI+ K++
Sbjct: 117 KMIEGGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQ 176
Query: 286 REEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYT 345
+ EA V EEM +GV P Y+ L+ + +++A + + M C+PD+ Y+
Sbjct: 177 KFLEAKEVLEEMKASGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYS 236
Query: 346 TMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVN 405
+++ A+ + + A+K + +++ P+V+TY T+I G K+ + + I D+M+ +
Sbjct: 237 SIIHAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILDQMQES 296
Query: 406 G-IKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNE 464
G + P+ ++T+++ K+ A M G PD ++ E
Sbjct: 297 GDVLPDVVTYSTVINGLCKSDMLVEAQKLLDRMCKAGCNPDVVTYTTIIDGLCKCGRLEE 356
Query: 465 ANELLGNFNHPNNEPGI 481
A LL P +
Sbjct: 357 AEYLLQGMKRAGCAPNV 373
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 109/229 (47%)
Query: 217 AGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSKIYDQMQRAGLQPDVVSYAL 276
AG A +L M G T+ +++ N ++ D ++ G P+VV+Y
Sbjct: 3 AGDLHAALELLEEMKSAGFAPDAFTHTPIITAMANAGDLDGAMDHLRSMGCDPNVVTYTA 62
Query: 277 LINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDR 336
LI A+ +A++ EEA+ + EEM + G P YN+L+DA MV A+ V K M
Sbjct: 63 LIAAFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKKMIEGG 122
Query: 337 CSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMM 396
+P++ ++ +++ + +++ A K + G PNV+TY LI G K +
Sbjct: 123 FAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQKFLEAK 182
Query: 397 EIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPD 445
E+ ++M+ +G+ P+ ++ ++ K + A + M G PD
Sbjct: 183 EVLEEMKASGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPD 231
>gi|224103543|ref|XP_002313097.1| predicted protein [Populus trichocarpa]
gi|222849505|gb|EEE87052.1| predicted protein [Populus trichocarpa]
Length = 751
Score = 171 bits (434), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 116/442 (26%), Positives = 213/442 (48%), Gaps = 13/442 (2%)
Query: 58 LPKDLVLGTLVRLKQLKKWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEK 117
L + +L ++VR + K + +E + I S N + +LI + G+ +
Sbjct: 168 LSYNAILDSIVRCR---KPVIFAEKVYREMIASGVSLNVFSYNILIRGFCAAGNLEMGLR 224
Query: 118 VLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFV 177
M + P+VV++ ++ AY + R A + R M G P+ LTY +++
Sbjct: 225 FFEEMERNRCLPNVVTYNTVIGAYCKLKRIDEAFKLLRSMGLEGLEPNLLTYNMVINGLC 284
Query: 178 EANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQ 237
+ +E V L + ++ PD ++ ++ Y K G + +A L + M G+
Sbjct: 285 RVGRIEETSGV---LAEMDRKGFAPDGVTYNTLVNGYCKVGNFHQALVLHSEMLRNGLPP 341
Query: 238 STVTYNSL---MSFETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVF 294
VTY SL M N + +DQM GL+P+ V+Y LIN + + +EA ++
Sbjct: 342 DVVTYTSLINTMCKAGNLNRAMEFFDQMHVRGLRPNGVTYTSLINGFSQKGFMDEAYRIW 401
Query: 295 EEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNA 354
+EM+ +G PT YN LL+ +SG +++A + + M SPD+ SY+T+++ +
Sbjct: 402 DEMIRSGFPPTIVTYNALLNGHCVSGRMEEAIGLLRGMEGKGLSPDVVSYSTIIAGFCRY 461
Query: 355 SDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIF 414
+++ A + + + G P+ ITY +LI+G + L + +++ +M + P++ +
Sbjct: 462 QELDRAFQMNAEMVEKGVSPDAITYSSLIQGLCEQRRLNEACDLFQEMLNKSLLPDEFTY 521
Query: 415 TTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLS-LAKTADERNEANELLGNFN 473
T++++ Y K D + A+ + EM GF PD N+L++ L K A R EA LL
Sbjct: 522 TSLINGYCKEGDLNEALNLHDEMIKKGFLPDTVTYNVLINGLNKQARTR-EAKRLLLKLF 580
Query: 474 HPNNEPGINGLSISVDEEDDDD 495
+ + P NG++ E D
Sbjct: 581 YDESIP--NGITYDTLIESCSD 600
Score = 128 bits (322), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 101/422 (23%), Positives = 189/422 (44%), Gaps = 19/422 (4%)
Query: 51 ERTRGQP--LPKDLVLGTLVRLKQLKKWNVVSEVLEWLRIQSW--WDFNEMDFLMLITAY 106
ER R P + + V+G +LK+ + E + LR + N + + M+I
Sbjct: 230 ERNRCLPNVVTYNTVIGAYCKLKR------IDEAFKLLRSMGLEGLEPNLLTYNMVINGL 283
Query: 107 GKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSA 166
+ G + VL+ M++KG+AP V++ L+ Y + G + A + M +G P
Sbjct: 284 CRVGRIEETSGVLAEMDRKGFAPDGVTYNTLVNGYCKVGNFHQALVLHSEMLRNGLPPDV 343
Query: 167 LTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKL 226
+TY ++ +A A E F + L+P+ + +I + + G ++A ++
Sbjct: 344 VTYTSLINTMCKAGNLNRAMEFFDQM---HVRGLRPNGVTYTSLINGFSQKGFMDEAYRI 400
Query: 227 FALMAERGVQQSTVTYNSLM---SFETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGK 283
+ M G + VTYN+L+ +E + M+ GL PDVVSY+ +I + +
Sbjct: 401 WDEMIRSGFPPTIVTYNALLNGHCVSGRMEEAIGLLRGMEGKGLSPDVVSYSTIIAGFCR 460
Query: 284 ARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICS 343
+ + A + EM++ GV P Y+ L+ +++A +F+ M PD +
Sbjct: 461 YQELDRAFQMNAEMVEKGVSPDAITYSSLIQGLCEQRRLNEACDLFQEMLNKSLLPDEFT 520
Query: 344 YTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMR 403
YT++++ Y D+ A + + GF+P+ +TY LI G K + + K+
Sbjct: 521 YTSLINGYCKEGDLNEALNLHDEMIKKGFLPDTVTYNVLINGLNKQARTREAKRLLLKLF 580
Query: 404 VNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERN 463
+ PN + T++++ + +F S V K G +A + S+ K + N
Sbjct: 581 YDESIPNGITYDTLIES-CSDIEFKSVVALIKGFCMKGLM--NEADQVFESMIKRNQKPN 637
Query: 464 EA 465
EA
Sbjct: 638 EA 639
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 98/441 (22%), Positives = 194/441 (43%), Gaps = 29/441 (6%)
Query: 31 WRRLMNQIEEVGS--AVAVLRSERTRGQPLPKDLVLGTLVRLKQLKKWNV--VSEVLEWL 86
+ L+N +VG+ VL SE R LP D+V T + K N+ E + +
Sbjct: 311 YNTLVNGYCKVGNFHQALVLHSEMLRNG-LPPDVVTYTSLINTMCKAGNLNRAMEFFDQM 369
Query: 87 RIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGR 146
++ N + + LI + ++G ++A ++ M + G+ P++V++ AL+ + GR
Sbjct: 370 HVRGLRP-NGVTYTSLINGFSQKGFMDEAYRIWDEMIRSGFPPTIVTYNALLNGHCVSGR 428
Query: 147 YKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKM 206
+ A + R M+ G P ++Y I+ F +++E + F + + + PD
Sbjct: 429 MEEAIGLLRGMEGKGLSPDVVSYSTIIAGFC---RYQELDRAFQMNAEMVEKGVSPDAIT 485
Query: 207 FHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSF---ETNYKEVSKIYDQMQ 263
+ +I + +A LF M + + TY SL++ E + E ++D+M
Sbjct: 486 YSSLIQGLCEQRRLNEACDLFQEMLNKSLLPDEFTYTSLINGYCKEGDLNEALNLHDEMI 545
Query: 264 RAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDA-------- 315
+ G PD V+Y +LIN K R EA + ++ P Y+ L+++
Sbjct: 546 KKGFLPDTVTYNVLINGLNKQARTREAKRLLLKLFYDESIPNGITYDTLIESCSDIEFKS 605
Query: 316 -------FAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLK 368
F + G++++A VF+ M + P+ Y ++ + ++ A K ++ +
Sbjct: 606 VVALIKGFCMKGLMNEADQVFESMIKRNQKPNEAVYNVIIHGHCRDGNVHKAHKLYKEMV 665
Query: 369 QDGFVPNVITYGTLIKG-YAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDF 427
GF+P+ +T L+K Y++ + + + I D +R + + + ++ K +
Sbjct: 666 DFGFIPHTVTIIALVKALYSEGMDEQLNLVIRDILRSCKLS-DAELSKALVQINHKEGNI 724
Query: 428 DSAVVWYKEMESCGFPPDQKA 448
D+ EM GF P A
Sbjct: 725 DAVFNLLTEMAKDGFLPSGAA 745
>gi|291622148|emb|CBJ23784.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
thaliana]
Length = 630
Score = 171 bits (434), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 116/474 (24%), Positives = 222/474 (46%), Gaps = 38/474 (8%)
Query: 44 AVAVLRSERTRGQPLPKDLVLGTLVR-LKQLKKWNVVSEVLEWLRIQSWWDFNEMDFLML 102
AVA L E + +P P + L+ + ++ K++VV + E ++ N + +L
Sbjct: 65 AVA-LFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQ-NLGMPHNHYTYSIL 122
Query: 103 ITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGP 162
I + ++ A VL M K GY P++V+ ++L+ Y R A A+ +M +G
Sbjct: 123 INCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGY 182
Query: 163 RPSALTYQIILKLFVEANKFKEAEEV--------------------------------FM 190
+P+ +T+ ++ NK EA + F+
Sbjct: 183 QPNTVTFNTLIHGLFLHNKASEAVALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFI 242
Query: 191 TLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFET 250
L E+ L+P ++ +I K + A LF M +G++ + VTY+SL+S
Sbjct: 243 LLNKMEQGKLEPGVLIYTTIIDGLCKNKHMDDALNLFKEMETKGIRPNVVTYSSLISCLC 302
Query: 251 NY---KEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHK 307
NY + S++ M + PDV +++ LI+A+ K + EA +++EM+ + P+
Sbjct: 303 NYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIV 362
Query: 308 AYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRL 367
Y+ L++ F + +D+A+ +F+ M C PD+ SY+T++ + A ++ + FR +
Sbjct: 363 TYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVSYSTLIKGFCKAKRVDEGMELFREM 422
Query: 368 KQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDF 427
Q G V N +TY TLI+G + + + EI+ +M +G+ PN + T++D KN
Sbjct: 423 SQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKL 482
Query: 428 DSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGI 481
+ A+V ++ ++ P NI++ A + + +L N + +P +
Sbjct: 483 EKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDV 536
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 96/393 (24%), Positives = 183/393 (46%), Gaps = 41/393 (10%)
Query: 101 MLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSS 160
+++ K+GD + A +L+ M + P V+ +T +++ + +A +F+ M++
Sbjct: 226 VVVNGLCKRGDTDLAFILLNKMEQGKLEPGVLIYTTIIDGLCKNKHMDDALNLFKEMETK 285
Query: 161 GPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGY 220
G RP+ +TY ++ ++ +A + +++ + + PD F +I + K G
Sbjct: 286 GIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERK---INPDVFTFSALIDAFVKEGKL 342
Query: 221 EKARKLFALMAERGVQQSTVTYNSLM---SFETNYKEVSKIYDQMQRAGLQPDVVSYALL 277
+A KL+ M +R + S VTY+SL+ E ++++ M PDVVSY+ L
Sbjct: 343 VEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVSYSTL 402
Query: 278 INAYGKARREEEAL-----------------------------------AVFEEMLDAGV 302
I + KA+R +E + +F+EM+ GV
Sbjct: 403 IKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGV 462
Query: 303 RPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEK 362
P YN LLD +G +++A VF+ ++R + P I +Y M+ A +E
Sbjct: 463 PPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWD 522
Query: 363 FFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYG 422
F L G P+V+ Y T+I G+ + + E+ ++ +M+ +G PN + T++ A
Sbjct: 523 LFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARL 582
Query: 423 KNKDFDSAVVWYKEMESCGFPPDQKAKNILLSL 455
++ D +++ KEM SCGF D ++ ++
Sbjct: 583 RDGDREASAELIKEMRSCGFAGDASTIGLVTNM 615
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 84/315 (26%), Positives = 166/315 (52%), Gaps = 6/315 (1%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + + LI+ G ++ A ++LS M ++ P V + +AL++A+ + G+ AE ++
Sbjct: 290 NVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLY 349
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
M PS +TY ++ F ++ EA+++F ++ + PD + +I +
Sbjct: 350 DEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKH---CFPDVVSYSTLIKGF 406
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSLMS--FETNYKEVSK-IYDQMQRAGLQPDV 271
KA ++ +LF M++RG+ +TVTY +L+ F+ ++++ I+ +M G+ P++
Sbjct: 407 CKAKRVDEGMELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPNI 466
Query: 272 VSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKC 331
++Y L++ K + E+A+ VFE + + + PT YNI+++ +G V+ +F
Sbjct: 467 MTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCN 526
Query: 332 MRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNN 391
+ PD+ +Y TM+S + E A+ F+ +K+DG +PN Y TLI+ + +
Sbjct: 527 LSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGD 586
Query: 392 LEKMMEIYDKMRVNG 406
E E+ +MR G
Sbjct: 587 REASAELIKEMRSCG 601
Score = 95.9 bits (237), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 66/270 (24%), Positives = 122/270 (45%), Gaps = 3/270 (1%)
Query: 223 ARKLFALMAERGVQQSTVTYNSLMSF---ETNYKEVSKIYDQMQRAGLQPDVVSYALLIN 279
A LF M + S + ++ L+S + V + +QMQ G+ + +Y++LIN
Sbjct: 65 AVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGMPHNHYTYSILIN 124
Query: 280 AYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSP 339
+ + + ALAV +M+ G P + LL+ + S + +A + M P
Sbjct: 125 CFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQP 184
Query: 340 DICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIY 399
+ ++ T++ + A R+ G P+++TYG ++ G K + + +
Sbjct: 185 NTVTFNTLIHGLFLHNKASEAVALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFILL 244
Query: 400 DKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTA 459
+KM ++P I+TTI+D KNK D A+ +KEME+ G P+ + L+S
Sbjct: 245 NKMEQGKLEPGVLIYTTIIDGLCKNKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNY 304
Query: 460 DERNEANELLGNFNHPNNEPGINGLSISVD 489
++A+ LL + P + S +D
Sbjct: 305 GRWSDASRLLSDMIERKINPDVFTFSALID 334
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 53/227 (23%), Positives = 105/227 (46%), Gaps = 8/227 (3%)
Query: 70 LKQLKKWNVVSEVLEWLRIQSWWDF--NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGY 127
+K K V E +E R S N + + LI + GD + A+++ M G
Sbjct: 403 IKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGV 462
Query: 128 APSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEE 187
P+++++ L++ + G+ + A +F +Q S P+ TY I+++ +A K ++ +
Sbjct: 463 PPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWD 522
Query: 188 VFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMS 247
+F L +KPD ++ MI + + G E+A LF M E G ++ YN+L+
Sbjct: 523 LFCNL---SLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIR 579
Query: 248 F---ETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEAL 291
+ + + +++ +M+ G D + L+ N R ++ L
Sbjct: 580 ARLRDGDREASAELIKEMRSCGFAGDASTIGLVTNMLHDGRLDKSFL 626
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 38/177 (21%), Positives = 73/177 (41%)
Query: 322 VDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGT 381
+D A +F M + R P I ++ +LSA + + +++ G N TY
Sbjct: 62 LDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGMPHNHYTYSI 121
Query: 382 LIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCG 441
LI + + + L + + KM G +PN +++++ Y +K AV +M G
Sbjct: 122 LINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTG 181
Query: 442 FPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGINGLSISVDEEDDDDDDD 498
+ P+ N L+ ++ +EA L+ +P + + V+ D D
Sbjct: 182 YQPNTVTFNTLIHGLFLHNKASEAVALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTD 238
>gi|227202654|dbj|BAH56800.1| AT2G41720 [Arabidopsis thaliana]
Length = 815
Score = 171 bits (433), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 105/412 (25%), Positives = 188/412 (45%), Gaps = 18/412 (4%)
Query: 87 RIQSW-WDFNEMDFLM-------------LITAYGKQGDFNKAEKVLSFMNKKGYAPSVV 132
R W W N MD ++ LI A G G++ +A +V M G P +V
Sbjct: 190 RAGQWRWAMNLMDDMLRAAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLV 249
Query: 133 SHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTL 192
+H ++ AY G +Y A + F M+ + RP T+ II+ + + +A ++F ++
Sbjct: 250 THNIVLSAYKSGRQYSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSM 309
Query: 193 LDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLM---SFE 249
E+++ +PD F ++++Y G E R +F M G++ + V+YN+LM +
Sbjct: 310 -REKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVH 368
Query: 250 TNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAY 309
+ +++ G+ PDVVSY L+N+YG++R+ +A VF M +P Y
Sbjct: 369 GMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTY 428
Query: 310 NILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQ 369
N L+DA+ +G + +A +F+ M +D P++ S T+L+A + + +
Sbjct: 429 NALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQS 488
Query: 370 DGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDS 429
G N Y + I Y LEK + +Y MR +K + FT ++ + +
Sbjct: 489 RGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRMSKYPE 548
Query: 430 AVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGI 481
A+ + KEME P ++ + +L + EA + EP +
Sbjct: 549 AISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDV 600
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 87/341 (25%), Positives = 163/341 (47%), Gaps = 8/341 (2%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + + L+ AY G A VL + + G P VVS+T L+ +YGR + A+ +F
Sbjct: 354 NIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVF 413
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
M+ +P+ +TY ++ + EA E+F + E+ +KP+ ++
Sbjct: 414 LMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQM---EQDGIKPNVVSVCTLLAAC 470
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSK---IYDQMQRAGLQPDV 271
++ + + RG+ +T YNS + N E+ K +Y M++ ++ D
Sbjct: 471 SRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADS 530
Query: 272 VSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKC 331
V++ +LI+ + + EA++ +EM D + T + Y+ +L A++ G V +A ++F
Sbjct: 531 VTFTILISGSCRMSKYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQ 590
Query: 332 MRRDRCSPDICSYTTMLSAYVNASDMEG-AEKFFRRLKQDGFVPNVITYGTLIKGYAKVN 390
M+ C PD+ +YT+ML AY NAS+ G A + ++ +G P+ I L++ + K
Sbjct: 591 MKMAGCEPDVIAYTSMLHAY-NASEKWGKACELLLEMEANGIEPDSIACSALMRAFNKGG 649
Query: 391 NLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAV 431
+ + D MR I +F I A +++ A+
Sbjct: 650 QPSNVFVLMDLMREKEIPFTGAVFFEIFSACNTLQEWKRAI 690
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 81/360 (22%), Positives = 179/360 (49%), Gaps = 8/360 (2%)
Query: 99 FLMLITAYGKQGDFNKAEKVLSFMNKKG--YAPSVVSHTALMEAYGRGGRYKNAEAIFRR 156
F ++I K G ++A + + M +K P VV+ T++M Y G +N A+F
Sbjct: 286 FNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEA 345
Query: 157 MQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKK 216
M + G +P+ ++Y ++ + A V L D +++ + PD + ++ Y +
Sbjct: 346 MVAEGLKPNIVSYNALMGAYAVHGMSGTALSV---LGDIKQNGIIPDVVSYTCLLNSYGR 402
Query: 217 AGGYEKARKLFALMAERGVQQSTVTYNSLM-SFETN--YKEVSKIYDQMQRAGLQPDVVS 273
+ KA+++F +M + + + VTYN+L+ ++ +N E +I+ QM++ G++P+VVS
Sbjct: 403 SRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVS 462
Query: 274 YALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMR 333
L+ A +++++ V G+ AYN + ++ + +++A +++ MR
Sbjct: 463 VCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMR 522
Query: 334 RDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLE 393
+ + D ++T ++S S A + + ++ Y +++ Y+K +
Sbjct: 523 KKKVKADSVTFTILISGSCRMSKYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVT 582
Query: 394 KMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILL 453
+ I+++M++ G +P+ +T+++ AY ++ + A EME+ G PD A + L+
Sbjct: 583 EAESIFNQMKMAGCEPDVIAYTSMLHAYNASEKWGKACELLLEMEANGIEPDSIACSALM 642
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 87/396 (21%), Positives = 155/396 (39%), Gaps = 76/396 (19%)
Query: 97 MDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRR 156
+ + L+ +YG+ KA++V M K+ P+VV++ AL++AYG G A IFR+
Sbjct: 391 VSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQ 450
Query: 157 MQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKK 216
M+ G +P+ ++ + L ++ K+ V L + + + ++ I Y
Sbjct: 451 MEQDGIKPNVVS---VCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYIN 507
Query: 217 AGGYEKARKLFALMAERGVQQSTVTYNSLMSFET-------------------------- 250
A EKA L+ M ++ V+ +VT+ L+S
Sbjct: 508 AAELEKAIALYQSMRKKKVKADSVTFTILISGSCRMSKYPEAISYLKEMEDLSIPLTKEV 567
Query: 251 ------------NYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEML 298
E I++QM+ AG +PDV++Y +++AY + + +A + EM
Sbjct: 568 YSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDVIAYTSMLHAYNASEKWGKACELLLEME 627
Query: 299 DAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRR--------------DRC------- 337
G+ P A + L+ AF G + MR C
Sbjct: 628 ANGIEPDSIACSALMRAFNKGGQPSNVFVLMDLMREKEIPFTGAVFFEIFSACNTLQEWK 687
Query: 338 --------------SPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLI 383
S I ML + + +E K F ++ G N+ TY L+
Sbjct: 688 RAIDLIQMMDPYLPSLSIGLTNQMLHLFGKSGKVEAMMKLFYKIIASGVGINLKTYAILL 747
Query: 384 KGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMD 419
+ V N K +E+ + M GI+P+ ++ I+
Sbjct: 748 EHLLAVGNWRKYIEVLEWMSGAGIQPSNQMYRDIIS 783
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 72/318 (22%), Positives = 138/318 (43%), Gaps = 43/318 (13%)
Query: 169 YQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFA 228
Y ++++L N +A +F + +K KPD + + +I + +AG + A L
Sbjct: 146 YNMMIRLHARHNWVDQARGLFFEM---QKWSCKPDAETYDALINAHGRAGQWRWAMNLMD 202
Query: 229 LMAERGVQQSTVTYNSLMSF---ETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKAR 285
M + S TYN+L++ N++E ++ +M G+ PD+V++ ++++AY R
Sbjct: 203 DMLRAAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGR 262
Query: 286 REEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDR--CSPDICS 343
+ +AL+ FE M A VRP +NI++ + G QA +F MR R C PD
Sbjct: 263 QYSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPD--- 319
Query: 344 YTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMR 403
V+T+ +++ Y+ +E +++ M
Sbjct: 320 --------------------------------VVTFTSIMHLYSVKGEIENCRAVFEAMV 347
Query: 404 VNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERN 463
G+KPN + +M AY + +A+ +++ G PD + LL+ + +
Sbjct: 348 AEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPG 407
Query: 464 EANELLGNFNHPNNEPGI 481
+A E+ +P +
Sbjct: 408 KAKEVFLMMRKERRKPNV 425
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 66/284 (23%), Positives = 129/284 (45%), Gaps = 6/284 (2%)
Query: 204 QKMFHMMIYMYKKAGGYEKARKLFALM-AERGVQQSTVTYNSLMSFETNYKEVSK---IY 259
+K F ++I + G E +F M ++ YN ++ + V + ++
Sbjct: 107 RKNFPVLIRELSRRGCIELCVNVFKWMKIQKNYCARNDIYNMMIRLHARHNWVDQARGLF 166
Query: 260 DQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAIS 319
+MQ+ +PD +Y LINA+G+A + A+ + ++ML A + P+ YN L++A S
Sbjct: 167 FEMQKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDMLRAAIAPSRSTYNNLINACGSS 226
Query: 320 GMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITY 379
G +A V K M + PD+ ++ +LSAY + A +F +K P+ T+
Sbjct: 227 GNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYSKALSYFELMKGAKVRPDTTTF 286
Query: 380 GTLIKGYAKVNNLEKMMEIYDKMRVNG--IKPNQTIFTTIMDAYGKNKDFDSAVVWYKEM 437
+I +K+ + +++++ MR +P+ FT+IM Y + ++ ++ M
Sbjct: 287 NIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAM 346
Query: 438 ESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGI 481
+ G P+ + N L+ A +LG+ P +
Sbjct: 347 VAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDV 390
>gi|302780401|ref|XP_002971975.1| hypothetical protein SELMODRAFT_96626 [Selaginella moellendorffii]
gi|300160274|gb|EFJ26892.1| hypothetical protein SELMODRAFT_96626 [Selaginella moellendorffii]
Length = 755
Score = 171 bits (433), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 110/423 (26%), Positives = 193/423 (45%), Gaps = 40/423 (9%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAP------------------------- 129
N + ++I K GD +KA ++L M + G P
Sbjct: 58 NVFTYAVVIQGLCKSGDLDKACELLEEMRESGPVPDAAIYNFVIHALCKARNTAKALDYF 117
Query: 130 -------SVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKF 182
+V++ T +++ + R A F +M+ G P+ TY +++ F + +K
Sbjct: 118 RSMECEKNVITWTIMIDGLCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKV 177
Query: 183 KEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTY 242
A ++ L + ++S L P+ + +I+ + + + A KLF M E G + VTY
Sbjct: 178 HRA---YLLLKEMKESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTY 234
Query: 243 NSLMSFETN---YKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLD 299
N+L+S E ++ D+M+ GLQPD SY L+ K + + AL VFE+ +
Sbjct: 235 NTLLSGLCRNGLMDEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSN 294
Query: 300 AGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEG 359
P AY+ L+ +G +D+A +F+ MR + C PD+ ++T ++ ++
Sbjct: 295 GDCPPDVVAYSTLIAGLCKAGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQE 354
Query: 360 AEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMD 419
A++ ++ PNVITY +LI G K + E++ +M V GI+PN + +++
Sbjct: 355 AQQVLETMEDRNCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIH 414
Query: 420 AYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILL-SLAKTADERNEANELLGNFNHPNNE 478
+ DSA++ +EM + G PD N L+ L KT EAN L G+
Sbjct: 415 GFCMTNGVDSALLLMEEMTATGCLPDIITYNTLIDGLCKTG-RAPEANRLFGDMKAKFCN 473
Query: 479 PGI 481
P +
Sbjct: 474 PDV 476
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 82/332 (24%), Positives = 162/332 (48%), Gaps = 6/332 (1%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
LI K G ++A K+ M + P VV+ TALM+ +G R + A+ + M+
Sbjct: 307 LIAGLCKAGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETMEDRN 366
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
P+ +TY ++ + + ++A+EVF ++ ++P+ ++ +I+ + G +
Sbjct: 367 CTPNVITYSSLIDGLCKTGQVRDAQEVFKRMI---VRGIEPNVVTYNSLIHGFCMTNGVD 423
Query: 222 KARKLFALMAERGVQQSTVTYNSL---MSFETNYKEVSKIYDQMQRAGLQPDVVSYALLI 278
A L M G +TYN+L + E ++++ M+ PDV++Y+ LI
Sbjct: 424 SALLLMEEMTATGCLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSCLI 483
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCS 338
+ K R + A +F++ML V P ++ L++ + +G+VD A + + M CS
Sbjct: 484 GGFCKLERIDMARTLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEEMVASDCS 543
Query: 339 PDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEI 398
PD+ +YT+++ + M A + +R+ + G PNV+TY LI + + +
Sbjct: 544 PDVYTYTSLVDGFCKVGRMVEARRVLKRMAKRGCQPNVVTYTALIDAFCRAGKPTVAYRL 603
Query: 399 YDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSA 430
++M NG++PN + +++ + D + A
Sbjct: 604 LEEMVGNGVQPNVITYRSLIGGFCGTGDLEEA 635
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 102/418 (24%), Positives = 198/418 (47%), Gaps = 12/418 (2%)
Query: 59 PKDLV-LGTLVR-LKQLKKWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAE 116
P D+V TL+ L + + + ++ E +R S + + + F L+ K +A+
Sbjct: 298 PPDVVAYSTLIAGLCKAGRLDEACKLFEKMRENSC-EPDVVTFTALMDGLCKGDRLQEAQ 356
Query: 117 KVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLF 176
+VL M + P+V+++++L++ + G+ ++A+ +F+RM G P+ +TY ++ F
Sbjct: 357 QVLETMEDRNCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGF 416
Query: 177 VEANKFKEAEEVFMTLLDE-EKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGV 235
N A + L++E + PD ++ +I K G +A +LF M +
Sbjct: 417 CMTNGVDSA----LLLMEEMTATGCLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFC 472
Query: 236 QQSTVTYNSLMSFETNYKEVS---KIYDQMQRAGLQPDVVSYALLINAYGKARREEEALA 292
+TY+ L+ + + ++D M + + PDVV+++ L+ Y A ++A
Sbjct: 473 NPDVITYSCLIGGFCKLERIDMARTLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAER 532
Query: 293 VFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYV 352
+ EEM+ + P Y L+D F G + +AR V K M + C P++ +YT ++ A+
Sbjct: 533 LLEEMVASDCSPDVYTYTSLVDGFCKVGRMVEARRVLKRMAKRGCQPNVVTYTALIDAFC 592
Query: 353 NASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKM-RVNGIKPNQ 411
A A + + +G PNVITY +LI G+ +LE+ +I +++ R K +
Sbjct: 593 RAGKPTVAYRLLEEMVGNGVQPNVITYRSLIGGFCGTGDLEEARKILERLERDENCKADM 652
Query: 412 TIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELL 469
+ +MD + +A+ + ++ G PP L+ E +A E+L
Sbjct: 653 FAYRVMMDGLCRTGRMSAALELLEAIKQSGTPPRHDIYVALIRGLCQGKELGKAMEVL 710
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 97/386 (25%), Positives = 168/386 (43%), Gaps = 35/386 (9%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
NE + +LI + K ++A +L M + G AP+VV+++ ++ + R + A +F
Sbjct: 160 NEWTYNVLINGFCKVHKVHRAYLLLKEMKESGLAPNVVTYSTVIHGFCRQTKVDTAYKLF 219
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEV---------------FMTLL------ 193
R+M +G P+ +TY +L EA E+ + TL+
Sbjct: 220 RQMVENGCMPNLVTYNTLLSGLCRNGLMDEAYELLDEMRERGLQPDKFSYDTLMAGLCKT 279
Query: 194 -----------DEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTY 242
D PD + +I KAG ++A KLF M E + VT+
Sbjct: 280 GKIDMALKVFEDNSNGDCPPDVVAYSTLIAGLCKAGRLDEACKLFEKMRENSCEPDVVTF 339
Query: 243 NSLMSFETN---YKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLD 299
+LM +E ++ + M+ P+V++Y+ LI+ K + +A VF+ M+
Sbjct: 340 TALMDGLCKGDRLQEAQQVLETMEDRNCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIV 399
Query: 300 AGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEG 359
G+ P YN L+ F ++ VD A + + M C PDI +Y T++
Sbjct: 400 RGIEPNVVTYNSLIHGFCMTNGVDSALLLMEEMTATGCLPDIITYNTLIDGLCKTGRAPE 459
Query: 360 AEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMD 419
A + F +K P+VITY LI G+ K+ ++ ++D M + P+ F+T+++
Sbjct: 460 ANRLFGDMKAKFCNPDVITYSCLIGGFCKLERIDMARTLFDDMLKQAVLPDVVTFSTLVE 519
Query: 420 AYGKNKDFDSAVVWYKEMESCGFPPD 445
Y D A +EM + PD
Sbjct: 520 GYCNAGLVDDAERLLEEMVASDCSPD 545
Score = 141 bits (356), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 92/413 (22%), Positives = 191/413 (46%), Gaps = 10/413 (2%)
Query: 44 AVAVLRSERTRGQPLPKDLVLGTLVRLKQLKKWNVVSEVLEWLRIQSWWDFNEMDFLMLI 103
A +L R G P+P + ++ L K ++ L++ R + N + + ++I
Sbjct: 78 ACELLEEMRESG-PVPDAAIYNFVIH--ALCKARNTAKALDYFRSMEC-EKNVITWTIMI 133
Query: 104 TAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPR 163
K +A + M KKG P+ ++ L+ + + + A + + M+ SG
Sbjct: 134 DGLCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRAYLLLKEMKESGLA 193
Query: 164 PSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKA 223
P+ +TY ++ F K A ++F +++ + P+ ++ ++ + G ++A
Sbjct: 194 PNVVTYSTVIHGFCRQTKVDTAYKLFRQMVE---NGCMPNLVTYNTLLSGLCRNGLMDEA 250
Query: 224 RKLFALMAERGVQQSTVTYNSLMSFETNYKEVS---KIYDQMQRAGLQPDVVSYALLINA 280
+L M ERG+Q +Y++LM+ ++ K+++ PDVV+Y+ LI
Sbjct: 251 YELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVVAYSTLIAG 310
Query: 281 YGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPD 340
KA R +EA +FE+M + P + L+D + +A+ V + M C+P+
Sbjct: 311 LCKAGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETMEDRNCTPN 370
Query: 341 ICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYD 400
+ +Y++++ + A++ F+R+ G PNV+TY +LI G+ N ++ + + +
Sbjct: 371 VITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDSALLLME 430
Query: 401 KMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILL 453
+M G P+ + T++D K A + +M++ PD + L+
Sbjct: 431 EMTATGCLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSCLI 483
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 101/403 (25%), Positives = 180/403 (44%), Gaps = 11/403 (2%)
Query: 83 LEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYG 142
W Q +D N + L A + ++ +L G P+V ++ +++
Sbjct: 11 FHWASKQQGFDHNVYTYNRLFEALLRARRIDETCHILKNGWPPGITPNVFTYAVVIQGLC 70
Query: 143 RGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKP 202
+ G A + M+ SGP P A Y ++ +A +A + F ++ + EK+ +
Sbjct: 71 KSGDLDKACELLEEMRESGPVPDAAIYNFVIHALCKARNTAKALDYFRSM-ECEKNVIT- 128
Query: 203 DQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSKIY--- 259
+ +MI KA +A FA M ++G + TYN L++ +V + Y
Sbjct: 129 ----WTIMIDGLCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRAYLLL 184
Query: 260 DQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAIS 319
+M+ +GL P+VV+Y+ +I+ + + + + A +F +M++ G P YN LL +
Sbjct: 185 KEMKESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGLCRN 244
Query: 320 GMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITY 379
G++D+A + MR PD SY T+++ ++ A K F P+V+ Y
Sbjct: 245 GLMDEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVVAY 304
Query: 380 GTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMES 439
TLI G K L++ ++++KMR N +P+ FT +MD K A + ME
Sbjct: 305 STLIAGLCKAGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETMED 364
Query: 440 CGFPPDQKAKNILL-SLAKTADERNEANELLGNFNHPNNEPGI 481
P+ + L+ L KT R +A E+ EP +
Sbjct: 365 RNCTPNVITYSSLIDGLCKTGQVR-DAQEVFKRMIVRGIEPNV 406
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 82/329 (24%), Positives = 148/329 (44%), Gaps = 8/329 (2%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + + LI + + A ++ M G P ++++ L++ + GR A +F
Sbjct: 405 NVVTYNSLIHGFCMTNGVDSALLLMEEMTATGCLPDIITYNTLIDGLCKTGRAPEANRLF 464
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
M++ P +TY ++ F + + A +F +L K + PD F ++ Y
Sbjct: 465 GDMKAKFCNPDVITYSCLIGGFCKLERIDMARTLFDDML---KQAVLPDVVTFSTLVEGY 521
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYK---EVSKIYDQMQRAGLQPDV 271
AG + A +L M TY SL+ E ++ +M + G QP+V
Sbjct: 522 CNAGLVDDAERLLEEMVASDCSPDVYTYTSLVDGFCKVGRMVEARRVLKRMAKRGCQPNV 581
Query: 272 VSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKC 331
V+Y LI+A+ +A + A + EEM+ GV+P Y L+ F +G +++AR + +
Sbjct: 582 VTYTALIDAFCRAGKPTVAYRLLEEMVGNGVQPNVITYRSLIGGFCGTGDLEEARKILER 641
Query: 332 MRRDR-CSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVN 390
+ RD C D+ +Y M+ M A + +KQ G P Y LI+G +
Sbjct: 642 LERDENCKADMFAYRVMMDGLCRTGRMSAALELLEAIKQSGTPPRHDIYVALIRGLCQGK 701
Query: 391 NLEKMMEIYDKMRVN-GIKPNQTIFTTIM 418
L K ME+ ++M ++ +PN + ++
Sbjct: 702 ELGKAMEVLEEMTLSRKSRPNAEAYEAVI 730
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 85/369 (23%), Positives = 163/369 (44%), Gaps = 9/369 (2%)
Query: 124 KKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFK 183
++G+ +V ++ L EA R R I + G P+ TY ++++ ++
Sbjct: 17 QQGFDHNVYTYNRLFEALLRARRIDETCHILKNGWPPGITPNVFTYAVVIQGLCKSGDLD 76
Query: 184 EAEEVFMTLLDE--EKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALM-AERGVQQSTV 240
+A E LL+E E P+ PD +++ +I+ KA KA F M E+ V T+
Sbjct: 77 KACE----LLEEMRESGPV-PDAAIYNFVIHALCKARNTAKALDYFRSMECEKNVITWTI 131
Query: 241 TYNSLMSFETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDA 300
+ L E + + +M++ G P+ +Y +LIN + K + A + +EM ++
Sbjct: 132 MIDGLCK-ANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRAYLLLKEMKES 190
Query: 301 GVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGA 360
G+ P Y+ ++ F VD A +F+ M + C P++ +Y T+LS M+ A
Sbjct: 191 GLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGLCRNGLMDEA 250
Query: 361 EKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDA 420
+ +++ G P+ +Y TL+ G K ++ +++++ P+ ++T++
Sbjct: 251 YELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVVAYSTLIAG 310
Query: 421 YGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPG 480
K D A +++M PD L+ D EA ++L N P
Sbjct: 311 LCKAGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETMEDRNCTPN 370
Query: 481 INGLSISVD 489
+ S +D
Sbjct: 371 VITYSSLID 379
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 97/201 (48%), Gaps = 6/201 (2%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
L+ + K G +A +VL M K+G P+VV++TAL++A+ R G+ A + M +G
Sbjct: 552 LVDGFCKVGRMVEARRVLKRMAKRGCQPNVVTYTALIDAFCRAGKPTVAYRLLEEMVGNG 611
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
+P+ +TY+ ++ F +EA ++ L +E K D + +M+ + G
Sbjct: 612 VQPNVITYRSLIGGFCGTGDLEEARKILERLERDENC--KADMFAYRVMMDGLCRTGRMS 669
Query: 222 KARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSKIYDQMQRAGL----QPDVVSYALL 277
A +L + + G Y +L+ KE+ K + ++ L +P+ +Y +
Sbjct: 670 AALELLEAIKQSGTPPRHDIYVALIRGLCQGKELGKAMEVLEEMTLSRKSRPNAEAYEAV 729
Query: 278 INAYGKARREEEALAVFEEML 298
I + R EEA A+ +E+L
Sbjct: 730 IQELAREGRHEEANALADELL 750
>gi|356517404|ref|XP_003527377.1| PREDICTED: pentatricopeptide repeat-containing protein At5g42310,
mitochondrial-like [Glycine max]
Length = 696
Score = 171 bits (433), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 108/384 (28%), Positives = 191/384 (49%), Gaps = 8/384 (2%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
+I + K GD +A + L+ G P + A++ A G GR AEA+F ++ +G
Sbjct: 263 IILGFSKAGDPTRAMRFLAMAQSNGLNPKPSTLVAVILALGNSGRTHEAEALFEEIRENG 322
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
P Y +LK +V+ K+AE V + EK+ +KPD++ + ++I Y AG +E
Sbjct: 323 SEPRTRAYNALLKGYVKTGSLKDAEFVVSEM---EKAGVKPDEQTYSLLIDAYAHAGRWE 379
Query: 222 KARKLFALMAERGVQQSTVTYNSLMSF---ETNYKEVSKIYDQMQRAGLQPDVVSYALLI 278
AR + M V+ ++ Y+ +++ + +++ ++ M+ G+QPD Y ++I
Sbjct: 380 SARIVLKEMEASNVEPNSYVYSRILASYRDKGEWQKSFQVLKDMKSNGVQPDRHFYNVMI 439
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCS 338
+ +GK + A+A FE ML G+RP +N L++ SG + A +F M++ S
Sbjct: 440 DTFGKYNCLDHAMATFERMLSEGIRPDTVTWNTLINCHCKSGRHNMAEELFGEMQQRGYS 499
Query: 339 PDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEI 398
P I +Y M+++ E F +++ G +PN ITY TL+ Y K +E
Sbjct: 500 PCITTYNIMINSMGEQQRWEQVSLFLSKMQSQGLLPNSITYTTLVDVYGKSGRFSDAIEC 559
Query: 399 YDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKT 458
+ ++ G KP T++ +++AY + + AV ++ M + G P A N L++ A
Sbjct: 560 LEVLKSTGFKPTSTMYNALINAYAQRGLSELAVNAFRLMTTEGLTPSLLALNSLIN-AFG 618
Query: 459 ADERN-EANELLGNFNHPNNEPGI 481
D R+ EA +L N EP +
Sbjct: 619 EDRRDAEAFAVLQYMKENNIEPDV 642
Score = 157 bits (397), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 91/356 (25%), Positives = 176/356 (49%), Gaps = 6/356 (1%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
L+ Y K G AE V+S M K G P +++ L++AY GR+++A + + M++S
Sbjct: 333 LLKGYVKTGSLKDAEFVVSEMEKAGVKPDEQTYSLLIDAYAHAGRWESARIVLKEMEASN 392
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
P++ Y IL + + +++++ F L D + + ++PD+ +++MI + K +
Sbjct: 393 VEPNSYVYSRILASYRDKGEWQKS---FQVLKDMKSNGVQPDRHFYNVMIDTFGKYNCLD 449
Query: 222 KARKLFALMAERGVQQSTVTYNSLMSFETN---YKEVSKIYDQMQRAGLQPDVVSYALLI 278
A F M G++ TVT+N+L++ + +++ +MQ+ G P + +Y ++I
Sbjct: 450 HAMATFERMLSEGIRPDTVTWNTLINCHCKSGRHNMAEELFGEMQQRGYSPCITTYNIMI 509
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCS 338
N+ G+ +R E+ +M G+ P Y L+D + SG A + ++
Sbjct: 510 NSMGEQQRWEQVSLFLSKMQSQGLLPNSITYTTLVDVYGKSGRFSDAIECLEVLKSTGFK 569
Query: 339 PDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEI 398
P Y +++AY E A FR + +G P+++ +LI + + + +
Sbjct: 570 PTSTMYNALINAYAQRGLSELAVNAFRLMTTEGLTPSLLALNSLINAFGEDRRDAEAFAV 629
Query: 399 YDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLS 454
M+ N I+P+ +TT+M A + + F Y+EM + G PD+KA+ +L S
Sbjct: 630 LQYMKENNIEPDVVTYTTLMKALIRVEKFQKVPAVYEEMVTSGCTPDRKARAMLRS 685
Score = 129 bits (323), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 102/445 (22%), Positives = 188/445 (42%), Gaps = 77/445 (17%)
Query: 82 VLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAY 141
V+ WL+ + E+ + +LI A G+ +A F+ + + +++ AL+ A
Sbjct: 141 VVSWLQKHNLCFSYELLYSILINALGRSEKLYEA-----FLLSQRQVLTPLTYNALIGAC 195
Query: 142 GRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANK---------FKEAE----EV 188
R G + A + +M+ G +P + Y I++ +NK + E E E+
Sbjct: 196 ARNGDVEKALNLMSKMRRDGYQPDFVNYSSIIQYLTRSNKIDSPILQKLYTEIETDKIEI 255
Query: 189 FMTLLDE---------------------EKSPLKPDQKMFHMMIYMYKKAGGYEKARKLF 227
L+++ + + L P +I +G +A LF
Sbjct: 256 DGHLMNDIILGFSKAGDPTRAMRFLAMAQSNGLNPKPSTLVAVILALGNSGRTHEAEALF 315
Query: 228 ALMAERGVQQSTVTYNSLMSFET---NYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKA 284
+ E G + T YN+L+ + K+ + +M++AG++PD +Y+LLI+AY A
Sbjct: 316 EEIRENGSEPRTRAYNALLKGYVKTGSLKDAEFVVSEMEKAGVKPDEQTYSLLIDAYAHA 375
Query: 285 RREEEALAVFEEMLDA-----------------------------------GVRPTHKAY 309
R E A V +EM + GV+P Y
Sbjct: 376 GRWESARIVLKEMEASNVEPNSYVYSRILASYRDKGEWQKSFQVLKDMKSNGVQPDRHFY 435
Query: 310 NILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQ 369
N+++D F +D A F+ M + PD ++ T+++ + + AE+ F ++Q
Sbjct: 436 NVMIDTFGKYNCLDHAMATFERMLSEGIRPDTVTWNTLINCHCKSGRHNMAEELFGEMQQ 495
Query: 370 DGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDS 429
G+ P + TY +I + E++ KM+ G+ PN +TT++D YGK+ F
Sbjct: 496 RGYSPCITTYNIMINSMGEQQRWEQVSLFLSKMQSQGLLPNSITYTTLVDVYGKSGRFSD 555
Query: 430 AVVWYKEMESCGFPPDQKAKNILLS 454
A+ + ++S GF P N L++
Sbjct: 556 AIECLEVLKSTGFKPTSTMYNALIN 580
Score = 105 bits (263), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 113/218 (51%), Gaps = 6/218 (2%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
LI + K G N AE++ M ++GY+P + ++ ++ + G R++ +MQS G
Sbjct: 473 LINCHCKSGRHNMAEELFGEMQQRGYSPCITTYNIMINSMGEQQRWEQVSLFLSKMQSQG 532
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
P+++TY ++ ++ ++ +F +A E L + + KP M++ +I Y + G E
Sbjct: 533 LLPNSITYTTLVDVYGKSGRFSDAIECLEVL---KSTGFKPTSTMYNALINAYAQRGLSE 589
Query: 222 KARKLFALMAERGVQQSTVTYNSLM-SFETNYK--EVSKIYDQMQRAGLQPDVVSYALLI 278
A F LM G+ S + NSL+ +F + + E + M+ ++PDVV+Y L+
Sbjct: 590 LAVNAFRLMTTEGLTPSLLALNSLINAFGEDRRDAEAFAVLQYMKENNIEPDVVTYTTLM 649
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAF 316
A + + ++ AV+EEM+ +G P KA +L A
Sbjct: 650 KALIRVEKFQKVPAVYEEMVTSGCTPDRKARAMLRSAL 687
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/277 (22%), Positives = 132/277 (47%), Gaps = 7/277 (2%)
Query: 218 GGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSK---IYDQMQRAGLQPDVVSY 274
G EK + F L+++R V + +TYN+L+ +V K + +M+R G QPD V+Y
Sbjct: 166 GRSEKLYEAF-LLSQRQVL-TPLTYNALIGACARNGDVEKALNLMSKMRRDGYQPDFVNY 223
Query: 275 ALLINAYGKARREEEALA--VFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCM 332
+ +I ++ + + + ++ E+ + N ++ F+ +G +A
Sbjct: 224 SSIIQYLTRSNKIDSPILQKLYTEIETDKIEIDGHLMNDIILGFSKAGDPTRAMRFLAMA 283
Query: 333 RRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNL 392
+ + +P + ++ A N+ AE F ++++G P Y L+KGY K +L
Sbjct: 284 QSNGLNPKPSTLVAVILALGNSGRTHEAEALFEEIRENGSEPRTRAYNALLKGYVKTGSL 343
Query: 393 EKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNIL 452
+ + +M G+KP++ ++ ++DAY ++SA + KEME+ P+ + +
Sbjct: 344 KDAEFVVSEMEKAGVKPDEQTYSLLIDAYAHAGRWESARIVLKEMEASNVEPNSYVYSRI 403
Query: 453 LSLAKTADERNEANELLGNFNHPNNEPGINGLSISVD 489
L+ + E ++ ++L + +P + ++ +D
Sbjct: 404 LASYRDKGEWQKSFQVLKDMKSNGVQPDRHFYNVMID 440
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 86/210 (40%), Gaps = 42/210 (20%)
Query: 74 KKWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVS 133
++W VS L ++ Q N + + L+ YGK G F+ A + L + G+ P+
Sbjct: 516 QRWEQVSLFLSKMQSQGLLP-NSITYTTLVDVYGKSGRFSDAIECLEVLKSTGFKPTSTM 574
Query: 134 HTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLL 193
+ AL+ AY + G + A FR M + G PS L ++ F E +
Sbjct: 575 YNALINAYAQRGLSELAVNAFRLMTTEGLTPSLLALNSLINAFGEDRR------------ 622
Query: 194 DEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFET--- 250
D + F ++ Y M E ++ VTY +LM
Sbjct: 623 ---------DAEAFAVLQY-----------------MKENNIEPDVVTYTTLMKALIRVE 656
Query: 251 NYKEVSKIYDQMQRAGLQPDVVSYALLINA 280
+++V +Y++M +G PD + A+L +A
Sbjct: 657 KFQKVPAVYEEMVTSGCTPDRKARAMLRSA 686
Score = 52.4 bits (124), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 73/154 (47%), Gaps = 5/154 (3%)
Query: 58 LPKDLVLGTLVRL-KQLKKWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAE 116
LP + TLV + + +++ E LE L+ + + M + LI AY ++G A
Sbjct: 534 LPNSITYTTLVDVYGKSGRFSDAIECLEVLKSTGFKPTSTM-YNALINAYAQRGLSELAV 592
Query: 117 KVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLF 176
M +G PS+++ +L+ A+G R A A+ + M+ + P +TY ++K
Sbjct: 593 NAFRLMTTEGLTPSLLALNSLINAFGEDRRDAEAFAVLQYMKENNIEPDVVTYTTLMKAL 652
Query: 177 VEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMM 210
+ KF++ V+ ++ S PD+K M+
Sbjct: 653 IRVEKFQKVPAVYEEMV---TSGCTPDRKARAML 683
>gi|30688764|ref|NP_850356.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75158748|sp|Q8RWS8.1|PP199_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At2g41720; AltName: Full=Protein EMBRYO DEFECTIVE 2654
gi|20268762|gb|AAM14084.1| putative salt-inducible protein [Arabidopsis thaliana]
gi|21436141|gb|AAM51317.1| putative salt-inducible protein [Arabidopsis thaliana]
gi|330254931|gb|AEC10025.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 822
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 105/412 (25%), Positives = 188/412 (45%), Gaps = 18/412 (4%)
Query: 87 RIQSW-WDFNEMDFLM-------------LITAYGKQGDFNKAEKVLSFMNKKGYAPSVV 132
R W W N MD ++ LI A G G++ +A +V M G P +V
Sbjct: 190 RAGQWRWAMNLMDDMLRAAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLV 249
Query: 133 SHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTL 192
+H ++ AY G +Y A + F M+ + RP T+ II+ + + +A ++F ++
Sbjct: 250 THNIVLSAYKSGRQYSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSM 309
Query: 193 LDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLM---SFE 249
E+++ +PD F ++++Y G E R +F M G++ + V+YN+LM +
Sbjct: 310 -REKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVH 368
Query: 250 TNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAY 309
+ +++ G+ PDVVSY L+N+YG++R+ +A VF M +P Y
Sbjct: 369 GMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTY 428
Query: 310 NILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQ 369
N L+DA+ +G + +A +F+ M +D P++ S T+L+A + + +
Sbjct: 429 NALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQS 488
Query: 370 DGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDS 429
G N Y + I Y LEK + +Y MR +K + FT ++ + +
Sbjct: 489 RGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRMSKYPE 548
Query: 430 AVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGI 481
A+ + KEME P ++ + +L + EA + EP +
Sbjct: 549 AISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDV 600
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 88/341 (25%), Positives = 164/341 (48%), Gaps = 8/341 (2%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + + L+ AY G A VL + + G P VVS+T L+ +YGR + A+ +F
Sbjct: 354 NIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVF 413
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
M+ +P+ +TY ++ + EA E+F + E+ +KP+ ++
Sbjct: 414 LMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQM---EQDGIKPNVVSVCTLLAAC 470
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSK---IYDQMQRAGLQPDV 271
++ + + RG+ +T YNS + N E+ K +Y M++ ++ D
Sbjct: 471 SRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADS 530
Query: 272 VSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKC 331
V++ +LI+ + + EA++ +EM D + T + Y+ +L A++ G V +A ++F
Sbjct: 531 VTFTILISGSCRMSKYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQ 590
Query: 332 MRRDRCSPDICSYTTMLSAYVNASDMEG-AEKFFRRLKQDGFVPNVITYGTLIKGYAKVN 390
M+ C PD+ +YT+ML AY NAS+ G A + F ++ +G P+ I L++ + K
Sbjct: 591 MKMAGCEPDVIAYTSMLHAY-NASEKWGKACELFLEMEANGIEPDSIACSALMRAFNKGG 649
Query: 391 NLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAV 431
+ + D MR I +F I A +++ A+
Sbjct: 650 QPSNVFVLMDLMREKEIPFTGAVFFEIFSACNTLQEWKRAI 690
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 81/360 (22%), Positives = 180/360 (50%), Gaps = 8/360 (2%)
Query: 99 FLMLITAYGKQGDFNKAEKVLSFMNKKG--YAPSVVSHTALMEAYGRGGRYKNAEAIFRR 156
F ++I K G ++A + + M +K P VV+ T++M Y G +N A+F
Sbjct: 286 FNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEA 345
Query: 157 MQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKK 216
M + G +P+ ++Y ++ + A V L D +++ + PD + ++ Y +
Sbjct: 346 MVAEGLKPNIVSYNALMGAYAVHGMSGTALSV---LGDIKQNGIIPDVVSYTCLLNSYGR 402
Query: 217 AGGYEKARKLFALMAERGVQQSTVTYNSLM-SFETN--YKEVSKIYDQMQRAGLQPDVVS 273
+ KA+++F +M + + + VTYN+L+ ++ +N E +I+ QM++ G++P+VVS
Sbjct: 403 SRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVS 462
Query: 274 YALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMR 333
L+ A +++++ V G+ AYN + ++ + +++A +++ MR
Sbjct: 463 VCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMR 522
Query: 334 RDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLE 393
+ + D ++T ++S S A + + ++ Y +++ Y+K +
Sbjct: 523 KKKVKADSVTFTILISGSCRMSKYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVT 582
Query: 394 KMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILL 453
+ I+++M++ G +P+ +T+++ AY ++ + A + EME+ G PD A + L+
Sbjct: 583 EAESIFNQMKMAGCEPDVIAYTSMLHAYNASEKWGKACELFLEMEANGIEPDSIACSALM 642
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 88/396 (22%), Positives = 156/396 (39%), Gaps = 76/396 (19%)
Query: 97 MDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRR 156
+ + L+ +YG+ KA++V M K+ P+VV++ AL++AYG G A IFR+
Sbjct: 391 VSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQ 450
Query: 157 MQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKK 216
M+ G +P+ ++ + L ++ K+ V L + + + ++ I Y
Sbjct: 451 MEQDGIKPNVVS---VCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYIN 507
Query: 217 AGGYEKARKLFALMAERGVQQSTVTYNSLMSFET-------------------------- 250
A EKA L+ M ++ V+ +VT+ L+S
Sbjct: 508 AAELEKAIALYQSMRKKKVKADSVTFTILISGSCRMSKYPEAISYLKEMEDLSIPLTKEV 567
Query: 251 ------------NYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEML 298
E I++QM+ AG +PDV++Y +++AY + + +A +F EM
Sbjct: 568 YSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDVIAYTSMLHAYNASEKWGKACELFLEME 627
Query: 299 DAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRR--------------DRC------- 337
G+ P A + L+ AF G + MR C
Sbjct: 628 ANGIEPDSIACSALMRAFNKGGQPSNVFVLMDLMREKEIPFTGAVFFEIFSACNTLQEWK 687
Query: 338 --------------SPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLI 383
S I ML + + +E K F ++ G N+ TY L+
Sbjct: 688 RAIDLIQMMDPYLPSLSIGLTNQMLHLFGKSGKVEAMMKLFYKIIASGVGINLKTYAILL 747
Query: 384 KGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMD 419
+ V N K +E+ + M GI+P+ ++ I+
Sbjct: 748 EHLLAVGNWRKYIEVLEWMSGAGIQPSNQMYRDIIS 783
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 72/318 (22%), Positives = 138/318 (43%), Gaps = 43/318 (13%)
Query: 169 YQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFA 228
Y ++++L N +A +F + +K KPD + + +I + +AG + A L
Sbjct: 146 YNMMIRLHARHNWVDQARGLFFEM---QKWSCKPDAETYDALINAHGRAGQWRWAMNLMD 202
Query: 229 LMAERGVQQSTVTYNSLMSF---ETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKAR 285
M + S TYN+L++ N++E ++ +M G+ PD+V++ ++++AY R
Sbjct: 203 DMLRAAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGR 262
Query: 286 REEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDR--CSPDICS 343
+ +AL+ FE M A VRP +NI++ + G QA +F MR R C PD
Sbjct: 263 QYSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPD--- 319
Query: 344 YTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMR 403
V+T+ +++ Y+ +E +++ M
Sbjct: 320 --------------------------------VVTFTSIMHLYSVKGEIENCRAVFEAMV 347
Query: 404 VNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERN 463
G+KPN + +M AY + +A+ +++ G PD + LL+ + +
Sbjct: 348 AEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPG 407
Query: 464 EANELLGNFNHPNNEPGI 481
+A E+ +P +
Sbjct: 408 KAKEVFLMMRKERRKPNV 425
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 66/284 (23%), Positives = 129/284 (45%), Gaps = 6/284 (2%)
Query: 204 QKMFHMMIYMYKKAGGYEKARKLFALM-AERGVQQSTVTYNSLMSFETNYKEVSK---IY 259
+K F ++I + G E +F M ++ YN ++ + V + ++
Sbjct: 107 RKNFPVLIRELSRRGCIELCVNVFKWMKIQKNYCARNDIYNMMIRLHARHNWVDQARGLF 166
Query: 260 DQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAIS 319
+MQ+ +PD +Y LINA+G+A + A+ + ++ML A + P+ YN L++A S
Sbjct: 167 FEMQKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDMLRAAIAPSRSTYNNLINACGSS 226
Query: 320 GMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITY 379
G +A V K M + PD+ ++ +LSAY + A +F +K P+ T+
Sbjct: 227 GNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYSKALSYFELMKGAKVRPDTTTF 286
Query: 380 GTLIKGYAKVNNLEKMMEIYDKMRVNG--IKPNQTIFTTIMDAYGKNKDFDSAVVWYKEM 437
+I +K+ + +++++ MR +P+ FT+IM Y + ++ ++ M
Sbjct: 287 NIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAM 346
Query: 438 ESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGI 481
+ G P+ + N L+ A +LG+ P +
Sbjct: 347 VAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDV 390
Score = 62.4 bits (150), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 49/218 (22%), Positives = 95/218 (43%), Gaps = 47/218 (21%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
++ AY KQG +AE + + M G P V+++T+++ AY ++ A +F M+++G
Sbjct: 571 VLCAYSKQGQVTEAESIFNQMKMAGCEPDVIAYTSMLHAYNASEKWGKACELFLEMEANG 630
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVF--MTLLDEEKSPLK------------------ 201
P ++ +++ F NK + VF M L+ E++ P
Sbjct: 631 IEPDSIACSALMRAF---NKGGQPSNVFVLMDLMREKEIPFTGAVFFEIFSACNTLQEWK 687
Query: 202 -------------PDQK--MFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLM 246
P + + M++++ K+G E KLF + GV + TY L+
Sbjct: 688 RAIDLIQMMDPYLPSLSIGLTNQMLHLFGKSGKVEAMMKLFYKIIASGVGINLKTYAILL 747
Query: 247 SFET---NYKEVSKIYDQMQRAGLQP------DVVSYA 275
N+++ ++ + M AG+QP D++S+
Sbjct: 748 EHLLAVGNWRKYIEVLEWMSGAGIQPSNQMYRDIISFG 785
>gi|147859909|emb|CAN83144.1| hypothetical protein VITISV_040783 [Vitis vinifera]
Length = 724
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 102/384 (26%), Positives = 182/384 (47%), Gaps = 34/384 (8%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
+I + K GD N+A L+ + G +P + A++ A G GR + AEAIF ++ G
Sbjct: 333 IIVGFAKSGDVNRAMSFLAMVQGNGLSPKTATLVAVITALGNAGRTEEAEAIFEELKEGG 392
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
P Y +LK +V+ K+AE + + E+S PD+ + ++I Y AG +E
Sbjct: 393 LMPRTRAYNALLKGYVKTGSLKDAESIVSEM---ERSGFSPDEHTYSLLIDAYANAGRWE 449
Query: 222 KARKLFALMAERGVQQSTVTYNSLMSF---ETNYKEVSKIYDQMQRAGLQPDVVSYALLI 278
AR + M GV+ ++ ++ +++ +++ ++ +M+ +G+ PD Y ++I
Sbjct: 450 SARIVLKEMEASGVRPNSYVFSRILASYRDRGKWQKSFQVLREMRNSGVSPDRHFYNVMI 509
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCS 338
+ +GK + ALA F+ M GV+P +N L+D SG ++A +F+ M+ CS
Sbjct: 510 DTFGKCNCLDHALATFDRMRMEGVQPDAVTWNTLIDCHCKSGHHNKAEELFEAMQESGCS 569
Query: 339 PDICSYTTMLSA----------------------------YVNASDMEGAEKFFRRLKQD 370
P +Y M+++ Y E A FR ++ D
Sbjct: 570 PCTTTYNIMINSFGEQERWEDVKTLLGKMQSQGLLANVVTYTTLGLSEQAINAFRVMRAD 629
Query: 371 GFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSA 430
G P+V+ +LI + + + + M+ N +KP+ +TT+M A + + FD
Sbjct: 630 GLKPSVLVLNSLINAFGEDRRDAEAFSVLQYMKENDLKPDVVTYTTLMKALIRVEKFDKV 689
Query: 431 VVWYKEMESCGFPPDQKAKNILLS 454
Y+EM G PD+KA+ +L S
Sbjct: 690 PAVYEEMTLSGCTPDRKARAMLRS 713
Score = 125 bits (315), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 87/346 (25%), Positives = 166/346 (47%), Gaps = 8/346 (2%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNA--EAIFRRMQS 159
LI A + D KA ++S M + GY V+++ ++++ R + ++ + I+ ++S
Sbjct: 261 LIGACARNDDLEKALNLMSRMRRDGYPSDFVNYSFIIQSLTRTNKSDSSMLQKIYAEIES 320
Query: 160 SGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGG 219
L Q++ + V K + L + + L P +I AG
Sbjct: 321 DKIE---LDGQLLNDIIVGFAKSGDVNRAMSFLAMVQGNGLSPKTATLVAVITALGNAGR 377
Query: 220 YEKARKLFALMAERGVQQSTVTYNSLMSFET---NYKEVSKIYDQMQRAGLQPDVVSYAL 276
E+A +F + E G+ T YN+L+ + K+ I +M+R+G PD +Y+L
Sbjct: 378 TEEAEAIFEELKEGGLMPRTRAYNALLKGYVKTGSLKDAESIVSEMERSGFSPDEHTYSL 437
Query: 277 LINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDR 336
LI+AY A R E A V +EM +GVRP ++ +L ++ G ++ V + MR
Sbjct: 438 LIDAYANAGRWESARIVLKEMEASGVRPNSYVFSRILASYRDRGKWQKSFQVLREMRNSG 497
Query: 337 CSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMM 396
SPD Y M+ + + ++ A F R++ +G P+ +T+ TLI + K + K
Sbjct: 498 VSPDRHFYNVMIDTFGKCNCLDHALATFDRMRMEGVQPDAVTWNTLIDCHCKSGHHNKAE 557
Query: 397 EIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGF 442
E+++ M+ +G P T + +++++G+ + ++ +M+S G
Sbjct: 558 ELFEAMQESGCSPCTTTYNIMINSFGEQERWEDVKTLLGKMQSQGL 603
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 85/394 (21%), Positives = 184/394 (46%), Gaps = 13/394 (3%)
Query: 82 VLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAY 141
++ WL + E+ + +LI A G+ +A F+ + + +++ AL+ A
Sbjct: 211 LVTWLERHNLCFSYELLYSILIHALGRSEKLYEA-----FLLSQRQTLTPLTYNALIGAC 265
Query: 142 GRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEA--EEVFMTLLDEEKSP 199
R + A + RM+ G + Y I++ NK + ++++ + E
Sbjct: 266 ARNDDLEKALNLMSRMRRDGYPSDFVNYSFIIQSLTRTNKSDSSMLQKIYAEI---ESDK 322
Query: 200 LKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETN---YKEVS 256
++ D ++ + +I + K+G +A A++ G+ T T ++++ N +E
Sbjct: 323 IELDGQLLNDIIVGFAKSGDVNRAMSFLAMVQGNGLSPKTATLVAVITALGNAGRTEEAE 382
Query: 257 KIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAF 316
I+++++ GL P +Y L+ Y K ++A ++ EM +G P Y++L+DA+
Sbjct: 383 AIFEELKEGGLMPRTRAYNALLKGYVKTGSLKDAESIVSEMERSGFSPDEHTYSLLIDAY 442
Query: 317 AISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNV 376
A +G + AR V K M P+ ++ +L++Y + + + + R ++ G P+
Sbjct: 443 ANAGRWESARIVLKEMEASGVRPNSYVFSRILASYRDRGKWQKSFQVLREMRNSGVSPDR 502
Query: 377 ITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKE 436
Y +I + K N L+ + +D+MR+ G++P+ + T++D + K+ + A ++
Sbjct: 503 HFYNVMIDTFGKCNCLDHALATFDRMRMEGVQPDAVTWNTLIDCHCKSGHHNKAEELFEA 562
Query: 437 MESCGFPPDQKAKNILLSLAKTADERNEANELLG 470
M+ G P NI+++ + + LLG
Sbjct: 563 MQESGCSPCTTTYNIMINSFGEQERWEDVKTLLG 596
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/245 (27%), Positives = 116/245 (47%), Gaps = 14/245 (5%)
Query: 75 KWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSH 134
KW +VL +R S + + ++I +GK + A M +G P V+
Sbjct: 482 KWQKSFQVLREMR-NSGVSPDRHFYNVMIDTFGKCNCLDHALATFDRMRMEGVQPDAVTW 540
Query: 135 TALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLD 194
L++ + + G + AE +F MQ SG P TY I++ F E ++++ + TLL
Sbjct: 541 NTLIDCHCKSGHHNKAEELFEAMQESGCSPCTTTYNIMINSFGEQERWEDVK----TLLG 596
Query: 195 EEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLM-SFETNYK 253
+ +S Q + ++ Y G E+A F +M G++ S + NSL+ +F + +
Sbjct: 597 KMQS-----QGLLANVV-TYTTLGLSEQAINAFRVMRADGLKPSVLVLNSLINAFGEDRR 650
Query: 254 --EVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNI 311
E + M+ L+PDVV+Y L+ A + + ++ AV+EEM +G P KA +
Sbjct: 651 DAEAFSVLQYMKENDLKPDVVTYTTLMKALIRVEKFDKVPAVYEEMTLSGCTPDRKARAM 710
Query: 312 LLDAF 316
L A
Sbjct: 711 LRSAL 715
>gi|359475386|ref|XP_003631674.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39710-like [Vitis vinifera]
Length = 762
Score = 170 bits (431), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 115/439 (26%), Positives = 213/439 (48%), Gaps = 10/439 (2%)
Query: 35 MNQIEEVGSAVAVLRSERTRGQPLPKDLVLGTLVRLKQLKKWNVVSEVLEWLRIQSWWDF 94
+N I++ + + + +S L + VL +VR + K + E +R S
Sbjct: 155 LNMIDQAVNTINLAKSSGFMPGVLSYNSVLDAIVRSRGSVKLSAEEVYREMIR--SRVSP 212
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + +LI + G+ K M + G P+VV++ L++AY + GR A +
Sbjct: 213 NVYTYNILIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLIDAYCKMGRIDEAFGLL 272
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
+ M S G +P+ ++Y +I+ KEA E+ L + PD+ ++ ++ Y
Sbjct: 273 KSMSSKGMQPNLISYNVIINGLCREGSMKEAWEI---LEEMGYKGFTPDEVTYNTLLNGY 329
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSL---MSFETNYKEVSKIYDQMQRAGLQPDV 271
K G + +A + A M GV S VTY +L M N + +DQM+ GL+P+
Sbjct: 330 CKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRGLRPNE 389
Query: 272 VSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKC 331
+Y LI+ + + EA + EM ++G P+ YN + + +++A V +
Sbjct: 390 RTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLERMEEALGVVQE 449
Query: 332 MRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNN 391
M +PD+ SY+T++S + +++ A + + + + G P+ +TY +LI+G ++
Sbjct: 450 MVEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEKGVSPDAVTYSSLIQGLCEMRR 509
Query: 392 LEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNI 451
L + ++ +M G+ P++ +TT+++AY D + A+ + EM GF PD ++
Sbjct: 510 LTEACDLSQEMLDMGLPPDEFTYTTLINAYCVEGDLNKALHLHDEMIHKGFLPDAVTYSV 569
Query: 452 LLS-LAKTADERNEANELL 469
L++ L K A R EA LL
Sbjct: 570 LINGLNKQARTR-EAKRLL 587
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 110/459 (23%), Positives = 214/459 (46%), Gaps = 33/459 (7%)
Query: 35 MNQIEEVGSAVAVLRSERTRG-QP--LPKDLVLGTLVRLKQLKK-WNVVSEVLEWLRIQS 90
M +I+E A +L+S ++G QP + ++++ L R +K+ W E+LE + +
Sbjct: 262 MGRIDE---AFGLLKSMSSKGMQPNLISYNVIINGLCREGSMKEAW----EILEEMGYKG 314
Query: 91 WWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNA 150
+ +E+ + L+ Y K+G+F++A + + M + G +PSVV++TAL+ + + A
Sbjct: 315 FTP-DEVTYNTLLNGYCKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRA 373
Query: 151 EAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMM 210
F +M+ G RP+ TY ++ F EA + L + +S P ++
Sbjct: 374 MEFFDQMRIRGLRPNERTYTTLIDGFSRQGLLNEAYRI---LNEMTESGFSPSVVTYNAF 430
Query: 211 IYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSKIYD---QMQRAGL 267
I+ + E+A + M E+G+ V+Y++++S E+ + + +M G+
Sbjct: 431 IHGHCVLERMEEALGVVQEMVEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEKGV 490
Query: 268 QPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQART 327
PD V+Y+ LI + RR EA + +EMLD G+ P Y L++A+ + G +++A
Sbjct: 491 SPDAVTYSSLIQGLCEMRRLTEACDLSQEMLDMGLPPDEFTYTTLINAYCVEGDLNKALH 550
Query: 328 VFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLI---- 383
+ M PD +Y+ +++ + A++ +L + VP+ +TY TLI
Sbjct: 551 LHDEMIHKGFLPDAVTYSVLINGLNKQARTREAKRLLFKLIYEESVPSDVTYDTLIENCS 610
Query: 384 -----------KGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVV 432
KG+ + + +++ M KP + ++ I+ + + + A
Sbjct: 611 NIEFKSVVALIKGFCMKGLMHEADRVFESMVERNHKPGEAVYNVIIHGHCRGGNLPKAFN 670
Query: 433 WYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGN 471
YKEM GF P L+ E +E++G+
Sbjct: 671 LYKEMIHSGFVPHTVTVITLIKALFKEGMNEEMSEVIGD 709
Score = 43.1 bits (100), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 38/191 (19%), Positives = 78/191 (40%), Gaps = 11/191 (5%)
Query: 306 HKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICS--YTTMLSAYVNASDMEGAEKF 363
+K L A+S ++F+C++ + S + M+ +Y + + ++ A
Sbjct: 105 YKTAQTLAQELALSASDPSGSSIFQCLKDSYHVYNSSSAVFDLMVKSYSHLNMIDQAVNT 164
Query: 364 FRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMM--EIYDKMRVNGIKPNQTIFTTIMDAY 421
K GF+P V++Y +++ + K+ E+Y +M + + PN + ++ +
Sbjct: 165 INLAKSSGFMPGVLSYNSVLDAIVRSRGSVKLSAEEVYREMIRSRVSPNVYTYNILIRGF 224
Query: 422 GKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPG- 480
+ + + EME G P+ N L+ +EA LL + + +P
Sbjct: 225 CSVGELQKGLGCFGEMERNGCLPNVVTYNTLIDAYCKMGRIDEAFGLLKSMSSKGMQPNL 284
Query: 481 ------INGLS 485
INGL
Sbjct: 285 ISYNVIINGLC 295
>gi|42570403|ref|NP_850357.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|330254930|gb|AEC10024.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 683
Score = 170 bits (431), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 105/412 (25%), Positives = 188/412 (45%), Gaps = 18/412 (4%)
Query: 87 RIQSW-WDFNEMDFLM-------------LITAYGKQGDFNKAEKVLSFMNKKGYAPSVV 132
R W W N MD ++ LI A G G++ +A +V M G P +V
Sbjct: 58 RAGQWRWAMNLMDDMLRAAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLV 117
Query: 133 SHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTL 192
+H ++ AY G +Y A + F M+ + RP T+ II+ + + +A ++F ++
Sbjct: 118 THNIVLSAYKSGRQYSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSM 177
Query: 193 LDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLM---SFE 249
E+++ +PD F ++++Y G E R +F M G++ + V+YN+LM +
Sbjct: 178 -REKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVH 236
Query: 250 TNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAY 309
+ +++ G+ PDVVSY L+N+YG++R+ +A VF M +P Y
Sbjct: 237 GMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTY 296
Query: 310 NILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQ 369
N L+DA+ +G + +A +F+ M +D P++ S T+L+A + + +
Sbjct: 297 NALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQS 356
Query: 370 DGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDS 429
G N Y + I Y LEK + +Y MR +K + FT ++ + +
Sbjct: 357 RGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRMSKYPE 416
Query: 430 AVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGI 481
A+ + KEME P ++ + +L + EA + EP +
Sbjct: 417 AISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDV 468
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 92/330 (27%), Positives = 166/330 (50%), Gaps = 8/330 (2%)
Query: 101 MLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSS 160
M+I + + ++A + M K P ++ AL+ A+GR G+++ A + M +
Sbjct: 16 MMIRLHARHNWVDQARGLFFEMQKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDMLRA 75
Query: 161 GPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGY 220
PS TY ++ + ++EA EV + D + + PD ++++ YK Y
Sbjct: 76 AIAPSRSTYNNLINACGSSGNWREALEVCKKMTD---NGVGPDLVTHNIVLSAYKSGRQY 132
Query: 221 EKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSKIYDQM-----QRAGLQPDVVSYA 275
KA F LM V+ T T+N ++ + + S+ D +RA +PDVV++
Sbjct: 133 SKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFT 192
Query: 276 LLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRD 335
+++ Y E AVFE M+ G++P +YN L+ A+A+ GM A +V ++++
Sbjct: 193 SIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQN 252
Query: 336 RCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKM 395
PD+ SYT +L++Y + A++ F ++++ PNV+TY LI Y L +
Sbjct: 253 GIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEA 312
Query: 396 MEIYDKMRVNGIKPNQTIFTTIMDAYGKNK 425
+EI+ +M +GIKPN T++ A ++K
Sbjct: 313 VEIFRQMEQDGIKPNVVSVCTLLAACSRSK 342
Score = 132 bits (331), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 88/341 (25%), Positives = 164/341 (48%), Gaps = 8/341 (2%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + + L+ AY G A VL + + G P VVS+T L+ +YGR + A+ +F
Sbjct: 222 NIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVF 281
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
M+ +P+ +TY ++ + EA E+F + E+ +KP+ ++
Sbjct: 282 LMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQM---EQDGIKPNVVSVCTLLAAC 338
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSK---IYDQMQRAGLQPDV 271
++ + + RG+ +T YNS + N E+ K +Y M++ ++ D
Sbjct: 339 SRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADS 398
Query: 272 VSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKC 331
V++ +LI+ + + EA++ +EM D + T + Y+ +L A++ G V +A ++F
Sbjct: 399 VTFTILISGSCRMSKYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQ 458
Query: 332 MRRDRCSPDICSYTTMLSAYVNASDMEG-AEKFFRRLKQDGFVPNVITYGTLIKGYAKVN 390
M+ C PD+ +YT+ML AY NAS+ G A + F ++ +G P+ I L++ + K
Sbjct: 459 MKMAGCEPDVIAYTSMLHAY-NASEKWGKACELFLEMEANGIEPDSIACSALMRAFNKGG 517
Query: 391 NLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAV 431
+ + D MR I +F I A +++ A+
Sbjct: 518 QPSNVFVLMDLMREKEIPFTGAVFFEIFSACNTLQEWKRAI 558
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 83/352 (23%), Positives = 166/352 (47%), Gaps = 10/352 (2%)
Query: 124 KKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFK 183
+K Y + ++ + R A +F MQ +P A TY ++ A +++
Sbjct: 4 QKNYCARNDIYNMMIRLHARHNWVDQARGLFFEMQKWSCKPDAETYDALINAHGRAGQWR 63
Query: 184 EAEEVFMTLLDEE-KSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTY 242
A M L+D+ ++ + P + ++ +I +G + +A ++ M + GV VT+
Sbjct: 64 WA----MNLMDDMLRAAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTH 119
Query: 243 NSLMSFETNYKEVSKI---YDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLD 299
N ++S + ++ SK ++ M+ A ++PD ++ ++I K + +AL +F M +
Sbjct: 120 NIVLSAYKSGRQYSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMRE 179
Query: 300 --AGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDM 357
A RP + ++ +++ G ++ R VF+ M + P+I SY ++ AY
Sbjct: 180 KRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMS 239
Query: 358 EGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTI 417
A +KQ+G +P+V++Y L+ Y + K E++ MR KPN + +
Sbjct: 240 GTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNAL 299
Query: 418 MDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELL 469
+DAYG N AV +++ME G P+ + LL+ + ++ + +L
Sbjct: 300 IDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVL 351
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 81/360 (22%), Positives = 180/360 (50%), Gaps = 8/360 (2%)
Query: 99 FLMLITAYGKQGDFNKAEKVLSFMNKKG--YAPSVVSHTALMEAYGRGGRYKNAEAIFRR 156
F ++I K G ++A + + M +K P VV+ T++M Y G +N A+F
Sbjct: 154 FNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEA 213
Query: 157 MQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKK 216
M + G +P+ ++Y ++ + A V L D +++ + PD + ++ Y +
Sbjct: 214 MVAEGLKPNIVSYNALMGAYAVHGMSGTALSV---LGDIKQNGIIPDVVSYTCLLNSYGR 270
Query: 217 AGGYEKARKLFALMAERGVQQSTVTYNSLM-SFETN--YKEVSKIYDQMQRAGLQPDVVS 273
+ KA+++F +M + + + VTYN+L+ ++ +N E +I+ QM++ G++P+VVS
Sbjct: 271 SRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVS 330
Query: 274 YALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMR 333
L+ A +++++ V G+ AYN + ++ + +++A +++ MR
Sbjct: 331 VCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMR 390
Query: 334 RDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLE 393
+ + D ++T ++S S A + + ++ Y +++ Y+K +
Sbjct: 391 KKKVKADSVTFTILISGSCRMSKYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVT 450
Query: 394 KMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILL 453
+ I+++M++ G +P+ +T+++ AY ++ + A + EME+ G PD A + L+
Sbjct: 451 EAESIFNQMKMAGCEPDVIAYTSMLHAYNASEKWGKACELFLEMEANGIEPDSIACSALM 510
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 88/396 (22%), Positives = 156/396 (39%), Gaps = 76/396 (19%)
Query: 97 MDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRR 156
+ + L+ +YG+ KA++V M K+ P+VV++ AL++AYG G A IFR+
Sbjct: 259 VSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQ 318
Query: 157 MQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKK 216
M+ G +P+ ++ + L ++ K+ V L + + + ++ I Y
Sbjct: 319 MEQDGIKPNVVS---VCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYIN 375
Query: 217 AGGYEKARKLFALMAERGVQQSTVTYNSLMSFET-------------------------- 250
A EKA L+ M ++ V+ +VT+ L+S
Sbjct: 376 AAELEKAIALYQSMRKKKVKADSVTFTILISGSCRMSKYPEAISYLKEMEDLSIPLTKEV 435
Query: 251 ------------NYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEML 298
E I++QM+ AG +PDV++Y +++AY + + +A +F EM
Sbjct: 436 YSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDVIAYTSMLHAYNASEKWGKACELFLEME 495
Query: 299 DAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRR--------------DRC------- 337
G+ P A + L+ AF G + MR C
Sbjct: 496 ANGIEPDSIACSALMRAFNKGGQPSNVFVLMDLMREKEIPFTGAVFFEIFSACNTLQEWK 555
Query: 338 --------------SPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLI 383
S I ML + + +E K F ++ G N+ TY L+
Sbjct: 556 RAIDLIQMMDPYLPSLSIGLTNQMLHLFGKSGKVEAMMKLFYKIIASGVGINLKTYAILL 615
Query: 384 KGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMD 419
+ V N K +E+ + M GI+P+ ++ I+
Sbjct: 616 EHLLAVGNWRKYIEVLEWMSGAGIQPSNQMYRDIIS 651
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 72/318 (22%), Positives = 138/318 (43%), Gaps = 43/318 (13%)
Query: 169 YQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFA 228
Y ++++L N +A +F + +K KPD + + +I + +AG + A L
Sbjct: 14 YNMMIRLHARHNWVDQARGLFFEM---QKWSCKPDAETYDALINAHGRAGQWRWAMNLMD 70
Query: 229 LMAERGVQQSTVTYNSLMSF---ETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKAR 285
M + S TYN+L++ N++E ++ +M G+ PD+V++ ++++AY R
Sbjct: 71 DMLRAAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGR 130
Query: 286 REEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDR--CSPDICS 343
+ +AL+ FE M A VRP +NI++ + G QA +F MR R C PD
Sbjct: 131 QYSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPD--- 187
Query: 344 YTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMR 403
V+T+ +++ Y+ +E +++ M
Sbjct: 188 --------------------------------VVTFTSIMHLYSVKGEIENCRAVFEAMV 215
Query: 404 VNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERN 463
G+KPN + +M AY + +A+ +++ G PD + LL+ + +
Sbjct: 216 AEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPG 275
Query: 464 EANELLGNFNHPNNEPGI 481
+A E+ +P +
Sbjct: 276 KAKEVFLMMRKERRKPNV 293
>gi|414864980|tpg|DAA43537.1| TPA: hypothetical protein ZEAMMB73_764503 [Zea mays]
Length = 649
Score = 170 bits (431), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 107/400 (26%), Positives = 194/400 (48%), Gaps = 7/400 (1%)
Query: 57 PLPKDLVLGTLVRLKQLKKWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAE 116
P+P L L + W +++ L + S + N +++ +Y K +F+ A+
Sbjct: 119 PVPASASNALLAVLSR-AGWPHLAQEAYRLVLSSDSEVNAYTLNIMVHSYCKTLEFDGAD 177
Query: 117 KVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLF 176
V+S M K+ P VV+H L++A R G A A+ M + G +P +TY +LK
Sbjct: 178 TVISEMEKRCVFPDVVTHNVLIDARFRAGDVDAAIALVDSMANRGLKPGIVTYNSVLKGL 237
Query: 177 VEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQ 236
+ +F +A+EVF T+ ++ + PD + F+++I + + G ++A K + M R V
Sbjct: 238 CKHRRFDKAKEVFRTM---DQCSVAPDVRSFNILIGGFCRVGEVKEAVKFYKEMQHRYVT 294
Query: 237 QSTVTYNSLMSFETNYKEV---SKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAV 293
V+++ L+ + E+ +M+ GL PD V Y ++I + +A EAL V
Sbjct: 295 PDVVSFSCLIGLFSRRGEMDHAGAYLREMKGLGLVPDGVIYTMVIGGFCRAGSMSEALRV 354
Query: 294 FEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVN 353
+EM+ G P YN LL+ + A + M +PD+C++TT++ Y
Sbjct: 355 RDEMVGFGCLPDVVTYNTLLNGLCKQHRLLDAEKLLNEMEERGVTPDLCTFTTLIHGYCR 414
Query: 354 ASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTI 413
+ E A + F L + P+V+TY +LI G + +L K E++D M I PN
Sbjct: 415 QGNFENALQLFDTLLRQRLRPDVVTYNSLIDGMCRKGDLAKANELWDDMHAREILPNHIT 474
Query: 414 FTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILL 453
++ ++D++ + + A + EM G P+ + N ++
Sbjct: 475 YSILIDSHCEKGQVEDAFGFLDEMVKKGNLPNIRTYNSII 514
Score = 155 bits (393), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 89/355 (25%), Positives = 181/355 (50%), Gaps = 8/355 (2%)
Query: 97 MDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRR 156
+ F LI + ++G+ + A L M G P V +T ++ + R G A +
Sbjct: 298 VSFSCLIGLFSRRGEMDHAGAYLREMKGLGLVPDGVIYTMVIGGFCRAGSMSEALRVRDE 357
Query: 157 MQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDE-EKSPLKPDQKMFHMMIYMYK 215
M G P +TY +L + ++ +AE+ LL+E E+ + PD F +I+ Y
Sbjct: 358 MVGFGCLPDVVTYNTLLNGLCKQHRLLDAEK----LLNEMEERGVTPDLCTFTTLIHGYC 413
Query: 216 KAGGYEKARKLFALMAERGVQQSTVTYNSL---MSFETNYKEVSKIYDQMQRAGLQPDVV 272
+ G +E A +LF + + ++ VTYNSL M + + + ++++D M + P+ +
Sbjct: 414 RQGNFENALQLFDTLLRQRLRPDVVTYNSLIDGMCRKGDLAKANELWDDMHAREILPNHI 473
Query: 273 SYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCM 332
+Y++LI+++ + + E+A +EM+ G P + YN ++ + SG V + + + M
Sbjct: 474 TYSILIDSHCEKGQVEDAFGFLDEMVKKGNLPNIRTYNSIIKGYCRSGNVKKGQQFLQKM 533
Query: 333 RRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNL 392
R+D PD+ ++ T++ Y+ +M GA F ++++ P+ +TY +I G+++ N+
Sbjct: 534 RQDNVFPDLITFNTLIHGYIKEENMHGAFNVFNIMEKEMVRPDAVTYNMIINGFSEQGNM 593
Query: 393 EKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQK 447
+ ++ M +GI+P++ + ++++ + + A + EM GF PD K
Sbjct: 594 QDAGRVFKGMGDSGIEPDRYTYMSLINGHVTAGNSKQAFQLHDEMIHRGFAPDDK 648
Score = 146 bits (368), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 108/447 (24%), Positives = 206/447 (46%), Gaps = 15/447 (3%)
Query: 40 EVGSAVAVLRSERTRG-QP--LPKDLVLGTLVRLKQLKKWNVVSEVLEWLRIQSWWDFNE 96
+V +A+A++ S RG +P + + VL L + ++ K V ++ + +
Sbjct: 207 DVDAAIALVDSMANRGLKPGIVTYNSVLKGLCKHRRFDKAKEVFRTMDQCSVAP----DV 262
Query: 97 MDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRR 156
F +LI + + G+ +A K M + P VVS + L+ + R G +A A R
Sbjct: 263 RSFNILIGGFCRVGEVKEAVKFYKEMQHRYVTPDVVSFSCLIGLFSRRGEMDHAGAYLRE 322
Query: 157 MQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKS-PLKPDQKMFHMMIYMYK 215
M+ G P + Y +++ F A EA + + DE PD ++ ++
Sbjct: 323 MKGLGLVPDGVIYTMVIGGFCRAGSMSEA----LRVRDEMVGFGCLPDVVTYNTLLNGLC 378
Query: 216 KAGGYEKARKLFALMAERGVQQSTVTYNSLM---SFETNYKEVSKIYDQMQRAGLQPDVV 272
K A KL M ERGV T+ +L+ + N++ +++D + R L+PDVV
Sbjct: 379 KQHRLLDAEKLLNEMEERGVTPDLCTFTTLIHGYCRQGNFENALQLFDTLLRQRLRPDVV 438
Query: 273 SYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCM 332
+Y LI+ + +A ++++M + P H Y+IL+D+ G V+ A M
Sbjct: 439 TYNSLIDGMCRKGDLAKANELWDDMHAREILPNHITYSILIDSHCEKGQVEDAFGFLDEM 498
Query: 333 RRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNL 392
+ P+I +Y +++ Y + +++ ++F ++++QD P++IT+ TLI GY K N+
Sbjct: 499 VKKGNLPNIRTYNSIIKGYCRSGNVKKGQQFLQKMRQDNVFPDLITFNTLIHGYIKEENM 558
Query: 393 EKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNIL 452
+++ M ++P+ + I++ + + + A +K M G PD+ L
Sbjct: 559 HGAFNVFNIMEKEMVRPDAVTYNMIINGFSEQGNMQDAGRVFKGMGDSGIEPDRYTYMSL 618
Query: 453 LSLAKTADERNEANELLGNFNHPNNEP 479
++ TA +A +L H P
Sbjct: 619 INGHVTAGNSKQAFQLHDEMIHRGFAP 645
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 98/397 (24%), Positives = 181/397 (45%), Gaps = 8/397 (2%)
Query: 99 FLMLITAYGKQGDFNKA-EKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRM 157
F +LI Y + +A E ++ + P+ S+ AL+ R G A+ +R +
Sbjct: 90 FDLLIRTYTQSRKPREAFEAFRLLLDHRVPVPASASN-ALLAVLSRAGWPHLAQEAYRLV 148
Query: 158 QSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKA 217
SS +A T I++ + + +F A+ V + EK + PD +++I +A
Sbjct: 149 LSSDSEVNAYTLNIMVHSYCKTLEFDGADTVISEM---EKRCVFPDVVTHNVLIDARFRA 205
Query: 218 GGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSK---IYDQMQRAGLQPDVVSY 274
G + A L MA RG++ VTYNS++ ++ K ++ M + + PDV S+
Sbjct: 206 GDVDAAIALVDSMANRGLKPGIVTYNSVLKGLCKHRRFDKAKEVFRTMDQCSVAPDVRSF 265
Query: 275 ALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRR 334
+LI + + +EA+ ++EM V P +++ L+ F+ G +D A + M+
Sbjct: 266 NILIGGFCRVGEVKEAVKFYKEMQHRYVTPDVVSFSCLIGLFSRRGEMDHAGAYLREMKG 325
Query: 335 DRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEK 394
PD YT ++ + A M A + + G +P+V+TY TL+ G K + L
Sbjct: 326 LGLVPDGVIYTMVIGGFCRAGSMSEALRVRDEMVGFGCLPDVVTYNTLLNGLCKQHRLLD 385
Query: 395 MMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLS 454
++ ++M G+ P+ FTT++ Y + +F++A+ + + PD N L+
Sbjct: 386 AEKLLNEMEERGVTPDLCTFTTLIHGYCRQGNFENALQLFDTLLRQRLRPDVVTYNSLID 445
Query: 455 LAKTADERNEANELLGNFNHPNNEPGINGLSISVDEE 491
+ +ANEL + + P SI +D
Sbjct: 446 GMCRKGDLAKANELWDDMHAREILPNHITYSILIDSH 482
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 77/328 (23%), Positives = 145/328 (44%), Gaps = 35/328 (10%)
Query: 153 IFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEE---------------- 196
I + +S P P + ++++ + ++ K +EA E F LLD
Sbjct: 74 IVSSLLASSPTPQPQVFDLLIRTYTQSRKPREAFEAFRLLLDHRVPVPASASNALLAVLS 133
Query: 197 ------------KSPLKPDQKM----FHMMIYMYKKAGGYEKARKLFALMAERGVQQSTV 240
+ L D ++ ++M++ Y K ++ A + + M +R V V
Sbjct: 134 RAGWPHLAQEAYRLVLSSDSEVNAYTLNIMVHSYCKTLEFDGADTVISEMEKRCVFPDVV 193
Query: 241 TYNSLMSFETNYKEVS---KIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEM 297
T+N L+ +V + D M GL+P +V+Y ++ K RR ++A VF M
Sbjct: 194 THNVLIDARFRAGDVDAAIALVDSMANRGLKPGIVTYNSVLKGLCKHRRFDKAKEVFRTM 253
Query: 298 LDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDM 357
V P +++NIL+ F G V +A +K M+ +PD+ S++ ++ + +M
Sbjct: 254 DQCSVAPDVRSFNILIGGFCRVGEVKEAVKFYKEMQHRYVTPDVVSFSCLIGLFSRRGEM 313
Query: 358 EGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTI 417
+ A + R +K G VP+ + Y +I G+ + ++ + + + D+M G P+ + T+
Sbjct: 314 DHAGAYLREMKGLGLVPDGVIYTMVIGGFCRAGSMSEALRVRDEMVGFGCLPDVVTYNTL 373
Query: 418 MDAYGKNKDFDSAVVWYKEMESCGFPPD 445
++ K A EME G PD
Sbjct: 374 LNGLCKQHRLLDAEKLLNEMEERGVTPD 401
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/221 (23%), Positives = 97/221 (43%), Gaps = 2/221 (0%)
Query: 268 QPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQART 327
QP V + LLI Y ++R+ EA F +LD V A N LL + +G A+
Sbjct: 86 QPQV--FDLLIRTYTQSRKPREAFEAFRLLLDHRVPVPASASNALLAVLSRAGWPHLAQE 143
Query: 328 VFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYA 387
++ + + + M+ +Y + +GA+ +++ P+V+T+ LI
Sbjct: 144 AYRLVLSSDSEVNAYTLNIMVHSYCKTLEFDGADTVISEMEKRCVFPDVVTHNVLIDARF 203
Query: 388 KVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQK 447
+ +++ + + D M G+KP + +++ K++ FD A ++ M+ C PD +
Sbjct: 204 RAGDVDAAIALVDSMANRGLKPGIVTYNSVLKGLCKHRRFDKAKEVFRTMDQCSVAPDVR 263
Query: 448 AKNILLSLAKTADERNEANELLGNFNHPNNEPGINGLSISV 488
+ NIL+ E EA + H P + S +
Sbjct: 264 SFNILIGGFCRVGEVKEAVKFYKEMQHRYVTPDVVSFSCLI 304
>gi|242069957|ref|XP_002450255.1| hypothetical protein SORBIDRAFT_05g002620 [Sorghum bicolor]
gi|241936098|gb|EES09243.1| hypothetical protein SORBIDRAFT_05g002620 [Sorghum bicolor]
Length = 924
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 102/384 (26%), Positives = 187/384 (48%), Gaps = 13/384 (3%)
Query: 101 MLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSS 160
++I + +G +KA S + G +P VV++ +++ + AE +F++M
Sbjct: 198 IVINGFFNEGQVDKA---YSLFLEMGVSPDVVTYNTIIDGLCKAQEVDRAEDVFQQMVEK 254
Query: 161 GPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGY 220
G +P+ +TY I+ +A + AE VF ++D+ +KP ++ +I KA
Sbjct: 255 GVKPNNVTYNTIIDGLCKAQEVDMAEGVFQKMVDK---GVKPSNVTYNTIIDGLCKAQAV 311
Query: 221 EKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSK---IYDQMQRAGLQPDVVSYALL 277
++A +F M +RGV+ VTYN+++ + + K ++ QM G++PD ++Y ++
Sbjct: 312 DRAEGVFQQMIDRGVKPDHVTYNTIIDGLCKAQAIDKAEGVFQQMIDKGVKPDNLTYTII 371
Query: 278 INAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRC 337
I+ KA+ + A VF++M+D GV+P + YN L+ + +G ++ K M
Sbjct: 372 IDGLCKAQSVDRAEGVFQQMIDKGVKPNNGTYNCLIHGYLSTGQWEEVVQRIKEMSAHDL 431
Query: 338 SPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMME 397
PD+ +Y +L A F + + G P+V YG ++ GY K L +M +
Sbjct: 432 EPDVFTYGLLLDYLCKNGKCNEARSLFDSMIRKGIKPSVTIYGIMLHGYGKKGALSEMHD 491
Query: 398 IYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILL---- 453
+ + M NGI PN IF T++ AY K D + + +M+ G P+ L+
Sbjct: 492 LLNLMVANGISPNHRIFNTVICAYAKRAMIDEVMHIFIKMKQQGLSPNVVTYGTLIDALC 551
Query: 454 SLAKTADERNEANELLGNFNHPNN 477
L + D + N+++ PNN
Sbjct: 552 KLGRVDDAVLQFNQMINEGVTPNN 575
Score = 162 bits (409), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 97/362 (26%), Positives = 181/362 (50%), Gaps = 6/362 (1%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N F +I AY K+ ++ + M ++G +P+VV++ L++A + GR +A F
Sbjct: 504 NHRIFNTVICAYAKRAMIDEVMHIFIKMKQQGLSPNVVTYGTLIDALCKLGRVDDAVLQF 563
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
+M + G P+ + + ++ +K+++ EE+F+ +L++ ++PD F+ ++
Sbjct: 564 NQMINEGVTPNNVVFNSLVYGLCTVDKWEKVEELFLEMLNQ---GIRPDIVFFNTVLCNL 620
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSLM---SFETNYKEVSKIYDQMQRAGLQPDV 271
K G +AR+L M G++ ++YN+L+ F + E K+ D M AGL+P++
Sbjct: 621 CKEGRVMEARRLIDSMVCMGLKPDVISYNTLIDGHCFASRMDEAVKLLDGMVSAGLKPNI 680
Query: 272 VSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKC 331
VSY L++ Y KA R + A +F EML GV P + YN +L+ SG +AR ++
Sbjct: 681 VSYNTLLHGYCKAGRIDNAYCLFREMLRKGVTPGVETYNTILNGLFRSGRFSEARELYVN 740
Query: 332 MRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNN 391
M + R IC+Y+ +L + + + A K F+ L ++IT+ +I G K
Sbjct: 741 MIKSRKLWSICTYSIILDGFCKNNCFDEAFKIFQSLCSMDLQLDIITFNIMIDGLFKGGR 800
Query: 392 LEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNI 451
E M+++ + NG+ P+ + I + + + + ME G P+ N
Sbjct: 801 KEDAMDLFAAIPANGLVPSVVTYRLIAENLIEEGSLEELDCLFSVMEKSGTAPNSHMLNA 860
Query: 452 LL 453
L+
Sbjct: 861 LI 862
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 100/371 (26%), Positives = 176/371 (47%), Gaps = 6/371 (1%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
+I K + ++AE V M +KG P+ V++ +++ + AE +F++M G
Sbjct: 231 IIDGLCKAQEVDRAEDVFQQMVEKGVKPNNVTYNTIIDGLCKAQEVDMAEGVFQKMVDKG 290
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
+PS +TY I+ +A AE VF ++D +KPD ++ +I KA +
Sbjct: 291 VKPSNVTYNTIIDGLCKAQAVDRAEGVFQQMIDR---GVKPDHVTYNTIIDGLCKAQAID 347
Query: 222 KARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSK---IYDQMQRAGLQPDVVSYALLI 278
KA +F M ++GV+ +TY ++ + V + ++ QM G++P+ +Y LI
Sbjct: 348 KAEGVFQQMIDKGVKPDNLTYTIIIDGLCKAQSVDRAEGVFQQMIDKGVKPNNGTYNCLI 407
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCS 338
+ Y + EE + +EM + P Y +LLD +G ++AR++F M R
Sbjct: 408 HGYLSTGQWEEVVQRIKEMSAHDLEPDVFTYGLLLDYLCKNGKCNEARSLFDSMIRKGIK 467
Query: 339 PDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEI 398
P + Y ML Y + + +G PN + T+I YAK ++++M I
Sbjct: 468 PSVTIYGIMLHGYGKKGALSEMHDLLNLMVANGISPNHRIFNTVICAYAKRAMIDEVMHI 527
Query: 399 YDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKT 458
+ KM+ G+ PN + T++DA K D AV+ + +M + G P+ N L+ T
Sbjct: 528 FIKMKQQGLSPNVVTYGTLIDALCKLGRVDDAVLQFNQMINEGVTPNNVVFNSLVYGLCT 587
Query: 459 ADERNEANELL 469
D+ + EL
Sbjct: 588 VDKWEKVEELF 598
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 98/398 (24%), Positives = 182/398 (45%), Gaps = 6/398 (1%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
+ + + ++I K ++AE V M KG P+ ++ L+ Y G+++
Sbjct: 364 DNLTYTIIIDGLCKAQSVDRAEGVFQQMIDKGVKPNNGTYNCLIHGYLSTGQWEEVVQRI 423
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
+ M + P TY ++L + K EA +F +++ + +KP ++ +M++ Y
Sbjct: 424 KEMSAHDLEPDVFTYGLLLDYLCKNGKCNEARSLFDSMI---RKGIKPSVTIYGIMLHGY 480
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSLMSF---ETNYKEVSKIYDQMQRAGLQPDV 271
K G + L LM G+ + +N+++ EV I+ +M++ GL P+V
Sbjct: 481 GKKGALSEMHDLLNLMVANGISPNHRIFNTVICAYAKRAMIDEVMHIFIKMKQQGLSPNV 540
Query: 272 VSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKC 331
V+Y LI+A K R ++A+ F +M++ GV P + +N L+ ++ +F
Sbjct: 541 VTYGTLIDALCKLGRVDDAVLQFNQMINEGVTPNNVVFNSLVYGLCTVDKWEKVEELFLE 600
Query: 332 MRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNN 391
M PDI + T+L + A + + G P+VI+Y TLI G+ +
Sbjct: 601 MLNQGIRPDIVFFNTVLCNLCKEGRVMEARRLIDSMVCMGLKPDVISYNTLIDGHCFASR 660
Query: 392 LEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNI 451
+++ +++ D M G+KPN + T++ Y K D+A ++EM G P + N
Sbjct: 661 MDEAVKLLDGMVSAGLKPNIVSYNTLLHGYCKAGRIDNAYCLFREMLRKGVTPGVETYNT 720
Query: 452 LLSLAKTADERNEANELLGNFNHPNNEPGINGLSISVD 489
+L+ + +EA EL N I SI +D
Sbjct: 721 ILNGLFRSGRFSEARELYVNMIKSRKLWSICTYSIILD 758
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 96/386 (24%), Positives = 179/386 (46%), Gaps = 7/386 (1%)
Query: 101 MLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNA-EAIFRRMQS 159
++I + + G + K G+ + L++ R A + R+M
Sbjct: 89 IVIGCFCRIGRLELGFAAFGLILKTGWRVDDIVVNQLLKGLCDTKRVGEAMHVLLRQMPE 148
Query: 160 SGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGG 219
G R ++Y +LK + + +EA E+ ++D + S PD ++++I + G
Sbjct: 149 VGCRLGVVSYNTLLKGLCDRRRAEEARELLHMMVDGQDSSCSPDVVSYNIVINGFFNEGQ 208
Query: 220 YEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSK---IYDQMQRAGLQPDVVSYAL 276
+KA LF E GV VTYN+++ +EV + ++ QM G++P+ V+Y
Sbjct: 209 VDKAYSLFL---EMGVSPDVVTYNTIIDGLCKAQEVDRAEDVFQQMVEKGVKPNNVTYNT 265
Query: 277 LINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDR 336
+I+ KA+ + A VF++M+D GV+P++ YN ++D + VD+A VF+ M
Sbjct: 266 IIDGLCKAQEVDMAEGVFQKMVDKGVKPSNVTYNTIIDGLCKAQAVDRAEGVFQQMIDRG 325
Query: 337 CSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMM 396
PD +Y T++ A ++ AE F+++ G P+ +TY +I G K ++++
Sbjct: 326 VKPDHVTYNTIIDGLCKAQAIDKAEGVFQQMIDKGVKPDNLTYTIIIDGLCKAQSVDRAE 385
Query: 397 EIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLA 456
++ +M G+KPN + ++ Y ++ V KEM + PD +LL
Sbjct: 386 GVFQQMIDKGVKPNNGTYNCLIHGYLSTGQWEEVVQRIKEMSAHDLEPDVFTYGLLLDYL 445
Query: 457 KTADERNEANELLGNFNHPNNEPGIN 482
+ NEA L + +P +
Sbjct: 446 CKNGKCNEARSLFDSMIRKGIKPSVT 471
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 84/329 (25%), Positives = 154/329 (46%), Gaps = 5/329 (1%)
Query: 128 APSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEE 187
AP +++ ++ + R GR + A F + +G R + +LK + + EA
Sbjct: 81 APDCCTYSIVIGCFCRIGRLELGFAAFGLILKTGWRVDDIVVNQLLKGLCDTKRVGEAMH 140
Query: 188 VFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAE---RGVQQSTVTYNS 244
V + + E L ++ ++ E+AR+L +M + V+YN
Sbjct: 141 VLLRQMPEVGCRLGVVS--YNTLLKGLCDRRRAEEARELLHMMVDGQDSSCSPDVVSYNI 198
Query: 245 LMSFETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRP 304
+++ N +V K Y G+ PDVV+Y +I+ KA+ + A VF++M++ GV+P
Sbjct: 199 VINGFFNEGQVDKAYSLFLEMGVSPDVVTYNTIIDGLCKAQEVDRAEDVFQQMVEKGVKP 258
Query: 305 THKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFF 364
+ YN ++D + VD A VF+ M P +Y T++ A ++ AE F
Sbjct: 259 NNVTYNTIIDGLCKAQEVDMAEGVFQKMVDKGVKPSNVTYNTIIDGLCKAQAVDRAEGVF 318
Query: 365 RRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKN 424
+++ G P+ +TY T+I G K ++K ++ +M G+KP+ +T I+D K
Sbjct: 319 QQMIDRGVKPDHVTYNTIIDGLCKAQAIDKAEGVFQQMIDKGVKPDNLTYTIIIDGLCKA 378
Query: 425 KDFDSAVVWYKEMESCGFPPDQKAKNILL 453
+ D A +++M G P+ N L+
Sbjct: 379 QSVDRAEGVFQQMIDKGVKPNNGTYNCLI 407
Score = 91.7 bits (226), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 71/335 (21%), Positives = 157/335 (46%), Gaps = 10/335 (2%)
Query: 59 PKDLVLGTLVR-LKQLKKWNVVSEV-LEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAE 116
P ++V +LV L + KW V E+ LE L D + F ++ K+G +A
Sbjct: 573 PNNVVFNSLVYGLCTVDKWEKVEELFLEMLNQGIRPDI--VFFNTVLCNLCKEGRVMEAR 630
Query: 117 KVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLF 176
+++ M G P V+S+ L++ + R A + M S+G +P+ ++Y +L +
Sbjct: 631 RLIDSMVCMGLKPDVISYNTLIDGHCFASRMDEAVKLLDGMVSAGLKPNIVSYNTLLHGY 690
Query: 177 VEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQ 236
+A + A +F +L + + P + ++ ++ ++G + +AR+L+ M +
Sbjct: 691 CKAGRIDNAYCLFREML---RKGVTPGVETYNTILNGLFRSGRFSEARELYVNMIKSRKL 747
Query: 237 QSTVTYNSLM-SFETN--YKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAV 293
S TY+ ++ F N + E KI+ + LQ D++++ ++I+ K R+E+A+ +
Sbjct: 748 WSICTYSIILDGFCKNNCFDEAFKIFQSLCSMDLQLDIITFNIMIDGLFKGGRKEDAMDL 807
Query: 294 FEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVN 353
F + G+ P+ Y ++ + G +++ +F M + +P+ ++ ++
Sbjct: 808 FAAIPANGLVPSVVTYRLIAENLIEEGSLEELDCLFSVMEKSGTAPNSHMLNALIRKLLD 867
Query: 354 ASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAK 388
++ A + +L + F T LI +++
Sbjct: 868 RGEIPRAGAYLSKLDEKNFSLEASTTSMLISLFSR 902
>gi|302809105|ref|XP_002986246.1| hypothetical protein SELMODRAFT_123660 [Selaginella moellendorffii]
gi|300146105|gb|EFJ12777.1| hypothetical protein SELMODRAFT_123660 [Selaginella moellendorffii]
Length = 725
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 97/360 (26%), Positives = 175/360 (48%), Gaps = 5/360 (1%)
Query: 97 MDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRR 156
+ + +I K ++A +V+ M ++G P+V+++ L++ + R G A + R+
Sbjct: 115 VSYTTVINGLCKLDQVDEACRVMDKMIQRGCQPNVITYGTLVDGFCRVGDLDGAVELVRK 174
Query: 157 MQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKK 216
M G RP+A+TY I+ K A ++F + EE PD + ++ K
Sbjct: 175 MTERGYRPNAITYNNIMHGLCSGRKLDSALQLFKEM--EESGSCPPDVFTYSTIVDSLVK 232
Query: 217 AGGYEKARKLFALMAERGVQQSTVTYNSLM---SFETNYKEVSKIYDQMQRAGLQPDVVS 273
+G + A +L M +G + VTY+SL+ E + + +M R+G P++V+
Sbjct: 233 SGKVDDACRLVEAMVSKGCSPNVVTYSSLLHGLCKAGKLDEATALLQRMTRSGCSPNIVT 292
Query: 274 YALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMR 333
Y +I+ + K R +EA + EEM+D G +P Y +LLDAF G + A + + M
Sbjct: 293 YNTIIDGHCKLGRIDEAYHLLEEMVDGGCQPNVVTYTVLLDAFCKCGKAEDAIGLVEVMV 352
Query: 334 RDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLE 393
P++ +Y ++L + ++E A + + Q G VPNV++Y T+I G K +
Sbjct: 353 EKGYVPNLFTYNSLLDMFCKKDEVERACQLLSSMIQKGCVPNVVSYNTVIAGLCKATKVH 412
Query: 394 KMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILL 453
+ + + ++M N P+ F TI+DA K D A + ++ G P+ N L+
Sbjct: 413 EGVLLLEQMLSNNCVPDIVTFNTIIDAMCKTYRVDIAYELFNLIQESGCTPNLVTYNSLV 472
Score = 162 bits (409), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 104/420 (24%), Positives = 203/420 (48%), Gaps = 13/420 (3%)
Query: 41 VGSAVAVLRSERTRGQPLPKDLVLGTLVRLKQLKKWNVVSEVLEWL--RIQSWWDFNEMD 98
V +A+ +L RG P D+V T V + L K + V E + IQ N +
Sbjct: 95 VENALWLLEQMVMRG--CPPDVVSYTTV-INGLCKLDQVDEACRVMDKMIQRGCQPNVIT 151
Query: 99 FLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQ 158
+ L+ + + GD + A +++ M ++GY P+ +++ +M G + +A +F+ M+
Sbjct: 152 YGTLVDGFCRVGDLDGAVELVRKMTERGYRPNAITYNNIMHGLCSGRKLDSALQLFKEME 211
Query: 159 SSGPRPS-ALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKA 217
SG P TY I+ V++ K +A + ++ + SP + + +++ KA
Sbjct: 212 ESGSCPPDVFTYSTIVDSLVKSGKVDDACRLVEAMVSKGCSP---NVVTYSSLLHGLCKA 268
Query: 218 GGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSKIY---DQMQRAGLQPDVVSY 274
G ++A L M G + VTYN+++ + + Y ++M G QP+VV+Y
Sbjct: 269 GKLDEATALLQRMTRSGCSPNIVTYNTIIDGHCKLGRIDEAYHLLEEMVDGGCQPNVVTY 328
Query: 275 ALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRR 334
+L++A+ K + E+A+ + E M++ G P YN LLD F V++A + M +
Sbjct: 329 TVLLDAFCKCGKAEDAIGLVEVMVEKGYVPNLFTYNSLLDMFCKKDEVERACQLLSSMIQ 388
Query: 335 DRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEK 394
C P++ SY T+++ A+ + ++ + VP+++T+ T+I K ++
Sbjct: 389 KGCVPNVVSYNTVIAGLCKATKVHEGVLLLEQMLSNNCVPDIVTFNTIIDAMCKTYRVDI 448
Query: 395 MMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEM-ESCGFPPDQKAKNILL 453
E+++ ++ +G PN + +++ K++ FD A +EM G PD N ++
Sbjct: 449 AYELFNLIQESGCTPNLVTYNSLVHGLCKSRRFDQAEYLLREMTRKQGCSPDIITYNTVI 508
Score = 155 bits (391), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 97/393 (24%), Positives = 190/393 (48%), Gaps = 9/393 (2%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
++ + K G + A +++ M KG +P+VV++++L+ + G+ A A+ +RM SG
Sbjct: 226 IVDSLVKSGKVDDACRLVEAMVSKGCSPNVVTYSSLLHGLCKAGKLDEATALLQRMTRSG 285
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
P+ +TY I+ + + EA + ++D +P+ + +++ + K G E
Sbjct: 286 CSPNIVTYNTIIDGHCKLGRIDEAYHLLEEMVD---GGCQPNVVTYTVLLDAFCKCGKAE 342
Query: 222 KARKLFALMAERGVQQSTVTYNSLMSFETNYKEV---SKIYDQMQRAGLQPDVVSYALLI 278
A L +M E+G + TYNSL+ EV ++ M + G P+VVSY +I
Sbjct: 343 DAIGLVEVMVEKGYVPNLFTYNSLLDMFCKKDEVERACQLLSSMIQKGCVPNVVSYNTVI 402
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCS 338
KA + E + + E+ML P +N ++DA + VD A +F ++ C+
Sbjct: 403 AGLCKATKVHEGVLLLEQMLSNNCVPDIVTFNTIIDAMCKTYRVDIAYELFNLIQESGCT 462
Query: 339 PDICSYTTMLSAYVNASDMEGAEKFFRRL-KQDGFVPNVITYGTLIKGYAKVNNLEKMME 397
P++ +Y +++ + + AE R + ++ G P++ITY T+I G K +++ +
Sbjct: 463 PNLVTYNSLVHGLCKSRRFDQAEYLLREMTRKQGCSPDIITYNTVIDGLCKSKRVDRAYK 522
Query: 398 IYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILL-SLA 456
++ +M +G+ P+ ++ ++ + K + D A + M GF P L+
Sbjct: 523 LFLQMLSDGLAPDDVTYSIVISSLCKWRFMDEANNVLELMLKNGFDPGAITYGTLIDGFC 582
Query: 457 KTADERNEANELLGNFNHPNNEPGINGLSISVD 489
KT + ++A E+L + P + SI +D
Sbjct: 583 KTGN-LDKALEILQLLLSKGSYPDVVTFSIFID 614
Score = 148 bits (373), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 103/424 (24%), Positives = 185/424 (43%), Gaps = 42/424 (9%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + + L+ K G ++A +L M + G +P++V++ +++ + + GR A +
Sbjct: 254 NVVTYSSLLHGLCKAGKLDEATALLQRMTRSGCSPNIVTYNTIIDGHCKLGRIDEAYHLL 313
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
M G +P+ +TY ++L F + K ++A + ++++ P + ++ ++ M+
Sbjct: 314 EEMVDGGCQPNVVTYTVLLDAFCKCGKAEDAIGLVEVMVEKGYVP---NLFTYNSLLDMF 370
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSLMSF---ETNYKEVSKIYDQMQRAGLQPDV 271
K E+A +L + M ++G + V+YN++++ T E + +QM PD+
Sbjct: 371 CKKDEVERACQLLSSMIQKGCVPNVVSYNTVIAGLCKATKVHEGVLLLEQMLSNNCVPDI 430
Query: 272 VSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKC 331
V++ +I+A K R + A +F + ++G P YN L+ S DQA + +
Sbjct: 431 VTFNTIIDAMCKTYRVDIAYELFNLIQESGCTPNLVTYNSLVHGLCKSRRFDQAEYLLRE 490
Query: 332 M-RRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDG------------------- 371
M R+ CSPDI +Y T++ + ++ A K F ++ DG
Sbjct: 491 MTRKQGCSPDIITYNTVIDGLCKSKRVDRAYKLFLQMLSDGLAPDDVTYSIVISSLCKWR 550
Query: 372 ----------------FVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFT 415
F P ITYGTLI G+ K NL+K +EI + G P+ F+
Sbjct: 551 FMDEANNVLELMLKNGFDPGAITYGTLIDGFCKTGNLDKALEILQLLLSKGSYPDVVTFS 610
Query: 416 TIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHP 475
+D K A + M G PD N LL A +A +L
Sbjct: 611 IFIDWLSKRGRLRQAGELLETMLRAGLVPDTVTYNTLLKGFCDASRTEDAVDLFEVMRQC 670
Query: 476 NNEP 479
EP
Sbjct: 671 GCEP 674
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 90/399 (22%), Positives = 182/399 (45%), Gaps = 43/399 (10%)
Query: 122 MNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANK 181
MN+KG H +++ G+ +A FR M + P P ++TY ++ ++++
Sbjct: 1 MNRKGLKAHAGVHKSILRGLCDAGQCSDAVLHFREMSKTCP-PDSVTYNTMINGLSKSDR 59
Query: 182 FKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVT 241
+A + ++D + P+ ++ +++ + KA E A L M RG V+
Sbjct: 60 LDDAIRLLEEMVD---NGFAPNVFSYNTVLHGFCKANRVENALWLLEQMVMRGCPPDVVS 116
Query: 242 YNSLMSFETNYKEV---SKIYDQMQRAGLQPDVVSYALLINAYGKA-------------- 284
Y ++++ +V ++ D+M + G QP+V++Y L++ + +
Sbjct: 117 YTTVINGLCKLDQVDEACRVMDKMIQRGCQPNVITYGTLVDGFCRVGDLDGAVELVRKMT 176
Query: 285 ---------------------RREEEALAVFEEMLDAGVRPTHK-AYNILLDAFAISGMV 322
R+ + AL +F+EM ++G P Y+ ++D+ SG V
Sbjct: 177 ERGYRPNAITYNNIMHGLCSGRKLDSALQLFKEMEESGSCPPDVFTYSTIVDSLVKSGKV 236
Query: 323 DQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTL 382
D A + + M CSP++ +Y+++L A ++ A +R+ + G PN++TY T+
Sbjct: 237 DDACRLVEAMVSKGCSPNVVTYSSLLHGLCKAGKLDEATALLQRMTRSGCSPNIVTYNTI 296
Query: 383 IKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGF 442
I G+ K+ +++ + ++M G +PN +T ++DA+ K + A+ + M G+
Sbjct: 297 IDGHCKLGRIDEAYHLLEEMVDGGCQPNVVTYTVLLDAFCKCGKAEDAIGLVEVMVEKGY 356
Query: 443 PPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGI 481
P+ N LL + DE A +LL + P +
Sbjct: 357 VPNLFTYNSLLDMFCKKDEVERACQLLSSMIQKGCVPNV 395
Score = 142 bits (359), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 89/412 (21%), Positives = 190/412 (46%), Gaps = 7/412 (1%)
Query: 82 VLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAY 141
VL + + + + + +I K + A ++L M G+AP+V S+ ++ +
Sbjct: 30 VLHFREMSKTCPPDSVTYNTMINGLSKSDRLDDAIRLLEEMVDNGFAPNVFSYNTVLHGF 89
Query: 142 GRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLK 201
+ R +NA + +M G P ++Y ++ + ++ EA V ++ + +
Sbjct: 90 CKANRVENALWLLEQMVMRGCPPDVVSYTTVINGLCKLDQVDEACRVMDKMI---QRGCQ 146
Query: 202 PDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVS---KI 258
P+ + ++ + + G + A +L M ERG + + +TYN++M + +++ ++
Sbjct: 147 PNVITYGTLVDGFCRVGDLDGAVELVRKMTERGYRPNAITYNNIMHGLCSGRKLDSALQL 206
Query: 259 YDQMQRAG-LQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFA 317
+ +M+ +G PDV +Y+ ++++ K+ + ++A + E M+ G P Y+ LL
Sbjct: 207 FKEMEESGSCPPDVFTYSTIVDSLVKSGKVDDACRLVEAMVSKGCSPNVVTYSSLLHGLC 266
Query: 318 ISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVI 377
+G +D+A + + M R CSP+I +Y T++ + ++ A + G PNV+
Sbjct: 267 KAGKLDEATALLQRMTRSGCSPNIVTYNTIIDGHCKLGRIDEAYHLLEEMVDGGCQPNVV 326
Query: 378 TYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEM 437
TY L+ + K E + + + M G PN + +++D + K + + A M
Sbjct: 327 TYTVLLDAFCKCGKAEDAIGLVEVMVEKGYVPNLFTYNSLLDMFCKKDEVERACQLLSSM 386
Query: 438 ESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGINGLSISVD 489
G P+ + N +++ A + +E LL N P I + +D
Sbjct: 387 IQKGCVPNVVSYNTVIAGLCKATKVHEGVLLLEQMLSNNCVPDIVTFNTIID 438
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 84/363 (23%), Positives = 168/363 (46%), Gaps = 7/363 (1%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + + +L+ A+ K G A ++ M +KGY P++ ++ +L++ + + + A +
Sbjct: 324 NVVTYTVLLDAFCKCGKAEDAIGLVEVMVEKGYVPNLFTYNSLLDMFCKKDEVERACQLL 383
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
M G P+ ++Y ++ +A K E + +L PD F+ +I
Sbjct: 384 SSMIQKGCVPNVVSYNTVIAGLCKATKVHEGVLLLEQMLSNN---CVPDIVTFNTIIDAM 440
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSL---MSFETNYKEVSKIYDQMQRA-GLQPD 270
K + A +LF L+ E G + VTYNSL + + + + +M R G PD
Sbjct: 441 CKTYRVDIAYELFNLIQESGCTPNLVTYNSLVHGLCKSRRFDQAEYLLREMTRKQGCSPD 500
Query: 271 VVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFK 330
+++Y +I+ K++R + A +F +ML G+ P Y+I++ + +D+A V +
Sbjct: 501 IITYNTVIDGLCKSKRVDRAYKLFLQMLSDGLAPDDVTYSIVISSLCKWRFMDEANNVLE 560
Query: 331 CMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVN 390
M ++ P +Y T++ + +++ A + + L G P+V+T+ I +K
Sbjct: 561 LMLKNGFDPGAITYGTLIDGFCKTGNLDKALEILQLLLSKGSYPDVVTFSIFIDWLSKRG 620
Query: 391 NLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKN 450
L + E+ + M G+ P+ + T++ + + AV ++ M CG PD
Sbjct: 621 RLRQAGELLETMLRAGLVPDTVTYNTLLKGFCDASRTEDAVDLFEVMRQCGCEPDNATYT 680
Query: 451 ILL 453
L+
Sbjct: 681 TLV 683
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 75/147 (51%), Gaps = 7/147 (4%)
Query: 68 VRLKQLKKWNVVSE---VLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNK 124
+ + L KW + E VLE L +++ +D + + LI + K G+ +KA ++L +
Sbjct: 541 IVISSLCKWRFMDEANNVLE-LMLKNGFDPGAITYGTLIDGFCKTGNLDKALEILQLLLS 599
Query: 125 KGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKE 184
KG P VV+ + ++ + GR + A + M +G P +TY +LK F +A++ ++
Sbjct: 600 KGSYPDVVTFSIFIDWLSKRGRLRQAGELLETMLRAGLVPDTVTYNTLLKGFCDASRTED 659
Query: 185 AEEVFMTLLDEEKSPLKPDQKMFHMMI 211
A ++F + + +PD + ++
Sbjct: 660 AVDLFEVM---RQCGCEPDNATYTTLV 683
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/146 (21%), Positives = 67/146 (45%), Gaps = 1/146 (0%)
Query: 344 YTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMR 403
+ ++L +A A FR + + P+ +TY T+I G +K + L+ + + ++M
Sbjct: 13 HKSILRGLCDAGQCSDAVLHFREMSKT-CPPDSVTYNTMINGLSKSDRLDDAIRLLEEMV 71
Query: 404 VNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERN 463
NG PN + T++ + K ++A+ ++M G PPD + +++ D+ +
Sbjct: 72 DNGFAPNVFSYNTVLHGFCKANRVENALWLLEQMVMRGCPPDVVSYTTVINGLCKLDQVD 131
Query: 464 EANELLGNFNHPNNEPGINGLSISVD 489
EA ++ +P + VD
Sbjct: 132 EACRVMDKMIQRGCQPNVITYGTLVD 157
>gi|255577248|ref|XP_002529506.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223531022|gb|EEF32875.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 808
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 91/339 (26%), Positives = 177/339 (52%), Gaps = 4/339 (1%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
LI A G G++ +A KV M + G P +V+H ++ AY G +Y A + F M+ +
Sbjct: 219 LINACGSSGNWREALKVSKQMTENGVGPDLVTHNIVLSAYKTGAQYSKALSYFELMKGTN 278
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
RP T I++ V+ + ++A ++F ++ E+++ +PD F +I++Y +G E
Sbjct: 279 IRPDTTTRNIVIYCLVKLGQCEKAIDIFNSM-REKRAECRPDIVTFTSIIHLYSLSGQVE 337
Query: 222 KARKLFALMAERGVQQSTVTYNSLM---SFETNYKEVSKIYDQMQRAGLQPDVVSYALLI 278
+ +F+ M G+ + V+YN+L+ +F +E ++ +++ +GL PDVVSY L+
Sbjct: 338 NCKAVFSTMLAEGLTPTIVSYNALIGAYAFHGMSEEALSVFKKIKASGLLPDVVSYTSLL 397
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCS 338
++YG++++ ++A +F M A ++P ++N L+DA+ +G++ A V + M +D
Sbjct: 398 SSYGRSKQPKKAREMFNMMKKAKLKPNVVSFNALIDAYGSNGLLADAVKVLREMEQDGIH 457
Query: 339 PDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEI 398
P+I + T+L+A + K G N + + I Y V EK + +
Sbjct: 458 PNIVTICTLLAACGRCGQKVNIDAVLSAAKMRGIKLNTVACNSAIGSYMNVGEYEKAVAL 517
Query: 399 YDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEM 437
Y+ MR + PN +T ++ K + A+ ++ +M
Sbjct: 518 YNSMRKMKVAPNSVTYTVLISGCCKMSKYGKAIEFFADM 556
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 93/347 (26%), Positives = 171/347 (49%), Gaps = 8/347 (2%)
Query: 82 VLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAY 141
V W+++Q + + M+I + + ++A + M + P ++ AL+ A+
Sbjct: 129 VFRWMKLQKNYCARTDMYNMMIRLHARHNLTDQARGLFFEMQEWRCKPDSETYNALINAH 188
Query: 142 GRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLK 201
GR G+++ A I M PS TY ++ + ++EA +V + + + +
Sbjct: 189 GRAGQWRWAMNIMEDMLREAIPPSRSTYNNLINACGSSGNWREALKVSKQMTE---NGVG 245
Query: 202 PDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSK---I 258
PD ++++ YK Y KA F LM ++ T T N ++ + K I
Sbjct: 246 PDLVTHNIVLSAYKTGAQYSKALSYFELMKGTNIRPDTTTRNIVIYCLVKLGQCEKAIDI 305
Query: 259 YDQM--QRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAF 316
++ M +RA +PD+V++ +I+ Y + + E AVF ML G+ PT +YN L+ A+
Sbjct: 306 FNSMREKRAECRPDIVTFTSIIHLYSLSGQVENCKAVFSTMLAEGLTPTIVSYNALIGAY 365
Query: 317 AISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNV 376
A GM ++A +VFK ++ PD+ SYT++LS+Y + + A + F +K+ PNV
Sbjct: 366 AFHGMSEEALSVFKKIKASGLLPDVVSYTSLLSSYGRSKQPKKAREMFNMMKKAKLKPNV 425
Query: 377 ITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGK 423
+++ LI Y L +++ +M +GI PN T++ A G+
Sbjct: 426 VSFNALIDAYGSNGLLADAVKVLREMEQDGIHPNIVTICTLLAACGR 472
Score = 99.0 bits (245), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 69/289 (23%), Positives = 132/289 (45%), Gaps = 5/289 (1%)
Query: 206 MFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFET---NYKEVSKIYDQM 262
M++MMI ++ + ++AR LF M E + + TYN+L++ ++ I + M
Sbjct: 145 MYNMMIRLHARHNLTDQARGLFFEMQEWRCKPDSETYNALINAHGRAGQWRWAMNIMEDM 204
Query: 263 QRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMV 322
R + P +Y LINA G + EAL V ++M + GV P +NI+L A+
Sbjct: 205 LREAIPPSRSTYNNLINACGSSGNWREALKVSKQMTENGVGPDLVTHNIVLSAYKTGAQY 264
Query: 323 DQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFR--RLKQDGFVPNVITYG 380
+A + F+ M+ PD + ++ V E A F R K+ P+++T+
Sbjct: 265 SKALSYFELMKGTNIRPDTTTRNIVIYCLVKLGQCEKAIDIFNSMREKRAECRPDIVTFT 324
Query: 381 TLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESC 440
++I Y+ +E ++ M G+ P + ++ AY + + A+ +K++++
Sbjct: 325 SIIHLYSLSGQVENCKAVFSTMLAEGLTPTIVSYNALIGAYAFHGMSEEALSVFKKIKAS 384
Query: 441 GFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGINGLSISVD 489
G PD + LLS + + +A E+ +P + + +D
Sbjct: 385 GLLPDVVSYTSLLSSYGRSKQPKKAREMFNMMKKAKLKPNVVSFNALID 433
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 77/357 (21%), Positives = 155/357 (43%), Gaps = 12/357 (3%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + F LI AYG G A KVL M + G P++V+ L+ A GR G+ N +A+
Sbjct: 424 NVVSFNALIDAYGSNGLLADAVKVLREMEQDGIHPNIVTICTLLAACGRCGQKVNIDAVL 483
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
+ G + + + + ++ ++++A ++ ++ K + P+ + ++I
Sbjct: 484 SAAKMRGIKLNTVACNSAIGSYMNVGEYEKAVALYNSM---RKMKVAPNSVTYTVLISGC 540
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSLM---SFETNYKEVSKIYDQMQRAGLQPDV 271
K Y KA + FA M E + + +S++ S + E I+ M+ AG PD+
Sbjct: 541 CKMSKYGKAIEFFADMMELKIALTKEVCSSVICAYSKQGQITEAESIFTMMKMAGCCPDI 600
Query: 272 VSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKC 331
+++ +++AY +A + +EM D ++ A + L+ AF G Q + +
Sbjct: 601 ITFTAMLHAYNAGEHWGKACDLIQEMEDYDIQLDTIACSALMRAFNKRGNPSQVLILAEF 660
Query: 332 MRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNN 391
M+ + M+SA D + ++ V ++ L+ +
Sbjct: 661 MKEKEIPFSDAIFFEMVSACSLLRDWRTILNLMKLMEPSFSVVSIGLLNQLLHVLGRSGK 720
Query: 392 LEKMMEIYDKMRVNGIKPNQTIFTTIMD---AYGKNKDFDSAVVWYKEMESCGFPPD 445
+E MM+++ K+ +G + N ++ ++ A G + + + W ME G P
Sbjct: 721 IESMMKLFYKITASGAEINFNTYSIMLKNLLAVGNWRKYIEVLEW---MEDAGIQPS 774
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 53/261 (20%), Positives = 113/261 (43%), Gaps = 7/261 (2%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + + +LI+ K + KA + + M + A + ++++ AY + G+ AE+IF
Sbjct: 529 NSVTYTVLISGCCKMSKYGKAIEFFADMMELKIALTKEVCSSVICAYSKQGQITEAESIF 588
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
M+ +G P +T+ +L + + +A ++ + D + ++ D ++ +
Sbjct: 589 TMMKMAGCCPDIITFTAMLHAYNAGEHWGKACDLIQEMEDYD---IQLDTIACSALMRAF 645
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSKIYDQMQRAGLQPDVVSY 274
K G + L M E+ + S + ++S + ++ I + M+ VVS
Sbjct: 646 NKRGNPSQVLILAEFMKEKEIPFSDAIFFEMVSACSLLRDWRTILNLMKLMEPSFSVVSI 705
Query: 275 ALL---INAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKC 331
LL ++ G++ + E + +F ++ +G Y+I+L G + V +
Sbjct: 706 GLLNQLLHVLGRSGKIESMMKLFYKITASGAEINFNTYSIMLKNLLAVGNWRKYIEVLEW 765
Query: 332 MRRDRCSPDICSYTTMLSAYV 352
M P I Y +S+YV
Sbjct: 766 MEDAGIQPSIGMYYD-ISSYV 785
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 37/167 (22%), Positives = 74/167 (44%), Gaps = 7/167 (4%)
Query: 303 RPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICS----YTTMLSAYVNASDME 358
R K + L+ G ++ + VF+ M+ + + C+ Y M+ + + +
Sbjct: 104 RFARKNFPRLIKEITQRGALEHSNLVFRWMKLQK---NYCARTDMYNMMIRLHARHNLTD 160
Query: 359 GAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIM 418
A F +++ P+ TY LI + + M I + M I P+++ + ++
Sbjct: 161 QARGLFFEMQEWRCKPDSETYNALINAHGRAGQWRWAMNIMEDMLREAIPPSRSTYNNLI 220
Query: 419 DAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEA 465
+A G + ++ A+ K+M G PD NI+LS KT + ++A
Sbjct: 221 NACGSSGNWREALKVSKQMTENGVGPDLVTHNIVLSAYKTGAQYSKA 267
>gi|224090111|ref|XP_002308939.1| predicted protein [Populus trichocarpa]
gi|222854915|gb|EEE92462.1| predicted protein [Populus trichocarpa]
Length = 786
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 116/453 (25%), Positives = 214/453 (47%), Gaps = 13/453 (2%)
Query: 27 GKKNWRRLMNQIEEVGS---AVAVLRSERTRGQPLPKDLVLGTLVRLKQLKKWNVVSEVL 83
+KN+ L+ +I + GS ++ V R + + + + ++RL W + L
Sbjct: 98 ARKNFPLLIKEITQKGSIEHSILVFRWMKNQRNYCARTDIYNMMIRLHARHNWTDQARGL 157
Query: 84 EWLRIQSWWDFNEMDFL-MLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYG 142
+ +Q W + + LI A+G+ G + A ++ M +K PS ++ L+ A G
Sbjct: 158 -FFEMQKWRCKPDAETCNALINAHGRSGQWRWAMNIMEDMLQKAIPPSRSTYNNLINACG 216
Query: 143 RGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKP 202
G ++ A + ++M +G P +T+ IIL + ++ +A F + + + ++P
Sbjct: 217 SSGNWREALKLCKKMTENGVGPDLVTHNIILSAYKTGAQYAKALSYFELM---KGTNIRP 273
Query: 203 DQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQS--TVTYNSLM---SFETNYKEVSK 257
D +++IY K G YEKA +F M E+ + VT+ S++ S +
Sbjct: 274 DTTTLNIIIYCLTKLGQYEKAIGIFKSMREKRAECHPDVVTFTSIIHLYSVNGQIENCRA 333
Query: 258 IYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFA 317
++ M GL+P++VSY L+ AY +EAL+VF + ++G+RP +Y LL+++
Sbjct: 334 VFSTMVAEGLKPNIVSYNTLMGAYASHGMNKEALSVFNAIKNSGLRPDVVSYTSLLNSYG 393
Query: 318 ISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVI 377
S +AR VF+ M+RD+ P+I SY M+ AY + + A + R ++QDG PN +
Sbjct: 394 RSQQPKKAREVFEMMKRDKLKPNIVSYNAMIDAYGSNGLLAEAVEVLREMEQDGIYPNAV 453
Query: 378 TYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEM 437
+ TL+ + + + + IK N + + + +Y +F+ A Y+ M
Sbjct: 454 SICTLLAACGRCSRKVNIDVVLQAAERRHIKLNTIAYNSAIGSYMNVGEFEKATSMYRSM 513
Query: 438 ESCGFPPDQKAKNILLSLAKTADERNEANELLG 470
PD +L+S + EA E L
Sbjct: 514 RKSKVIPDAVTFTVLISGCCKMTKYCEALEFLS 546
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 97/381 (25%), Positives = 176/381 (46%), Gaps = 49/381 (12%)
Query: 97 MDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRR 156
+ F +I Y G V S M +G P++VS+ LM AY G K A ++F
Sbjct: 313 VTFTSIIHLYSVNGQIENCRAVFSTMVAEGLKPNIVSYNTLMGAYASHGMNKEALSVFNA 372
Query: 157 MQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY-- 214
+++SG RP ++Y +L + + + K+A EVF + ++ LKP+ ++ MI Y
Sbjct: 373 IKNSGLRPDVVSYTSLLNSYGRSQQPKKAREVFEMM---KRDKLKPNIVSYNAMIDAYGS 429
Query: 215 --------------KKAGGYEKARKLFALMA-------------------ERGVQQSTVT 241
++ G Y A + L+A R ++ +T+
Sbjct: 430 NGLLAEAVEVLREMEQDGIYPNAVSICTLLAACGRCSRKVNIDVVLQAAERRHIKLNTIA 489
Query: 242 YNSLMSFETN---YKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEML 298
YNS + N +++ + +Y M+++ + PD V++ +LI+ K + EAL EM+
Sbjct: 490 YNSAIGSYMNVGEFEKATSMYRSMRKSKVIPDAVTFTVLISGCCKMTKYCEALEFLSEMM 549
Query: 299 DAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDME 358
D + T +AY+ SG + +A ++F M+ CSPD+ +YT ML AY A +
Sbjct: 550 DLKIPMTKEAYS--------SGKITEAESMFNKMKMAGCSPDVVTYTMMLHAYNAAEHWK 601
Query: 359 GAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIM 418
A + +++ P+ I L++ + K + K++ + + MR I + IF ++
Sbjct: 602 KACALLQEMEEYNIQPDTIACSALMRAFNKGGDPSKVLILAEFMREKEIPLSDAIFFEMV 661
Query: 419 DAYGKNKDFDSAVVWYKEMES 439
A +D+ + + K MES
Sbjct: 662 SACSLLRDWRTTIELIKLMES 682
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 77/359 (21%), Positives = 156/359 (43%), Gaps = 44/359 (12%)
Query: 137 LMEAYGRGGRYKNAEAIFRRMQSSGPRPSAL-TYQIILKLFVEANKFKEAEEVFMTLLDE 195
L++ + G +++ +FR M++ + Y ++++L N +A +F +
Sbjct: 105 LIKEITQKGSIEHSILVFRWMKNQRNYCARTDIYNMMIRLHARHNWTDQARGLFFEM--- 161
Query: 196 EKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSF---ETNY 252
+K KPD + + +I + ++G + A + M ++ + S TYN+L++ N+
Sbjct: 162 QKWRCKPDAETCNALINAHGRSGQWRWAMNIMEDMLQKAIPPSRSTYNNLINACGSSGNW 221
Query: 253 KEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNIL 312
+E K+ +M G+ PD+V++ ++++AY + +AL+ FE M +RP NI+
Sbjct: 222 REALKLCKKMTENGVGPDLVTHNIILSAYKTGAQYAKALSYFELMKGTNIRPDTTTLNII 281
Query: 313 LDAFAISGMVDQARTVFKCMRRDR--CSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQD 370
+ G ++A +FK MR R C PD
Sbjct: 282 IYCLTKLGQYEKAIGIFKSMREKRAECHPD------------------------------ 311
Query: 371 GFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSA 430
V+T+ ++I Y+ +E ++ M G+KPN + T+M AY + A
Sbjct: 312 -----VVTFTSIIHLYSVNGQIENCRAVFSTMVAEGLKPNIVSYNTLMGAYASHGMNKEA 366
Query: 431 VVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGINGLSISVD 489
+ + +++ G PD + LL+ + + +A E+ +P I + +D
Sbjct: 367 LSVFNAIKNSGLRPDVVSYTSLLNSYGRSQQPKKAREVFEMMKRDKLKPNIVSYNAMID 425
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 81/373 (21%), Positives = 159/373 (42%), Gaps = 36/373 (9%)
Query: 97 MDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRR 156
+ + L+ +YG+ KA +V M + P++VS+ A+++AYG G A + R
Sbjct: 383 VSYTSLLNSYGRSQQPKKAREVFEMMKRDKLKPNIVSYNAMIDAYGSNGLLAEAVEVLRE 442
Query: 157 MQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKK 216
M+ G P+A++ I L + + + L E+ +K + ++ I Y
Sbjct: 443 MEQDGIYPNAVS---ICTLLAACGRCSRKVNIDVVLQAAERRHIKLNTIAYNSAIGSYMN 499
Query: 217 AGGYEKARKLFALMAERGVQQSTVTYNSLMSF---ETNY--------------------- 252
G +EKA ++ M + V VT+ L+S T Y
Sbjct: 500 VGEFEKATSMYRSMRKSKVIPDAVTFTVLISGCCKMTKYCEALEFLSEMMDLKIPMTKEA 559
Query: 253 ------KEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTH 306
E ++++M+ AG PDVV+Y ++++AY A ++A A+ +EM + ++P
Sbjct: 560 YSSGKITEAESMFNKMKMAGCSPDVVTYTMMLHAYNAAEHWKKACALLQEMEEYNIQPDT 619
Query: 307 KAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRR 366
A + L+ AF G + + + MR + M+SA D + +
Sbjct: 620 IACSALMRAFNKGGDPSKVLILAEFMREKEIPLSDAIFFEMVSACSLLRDWRTTIELIKL 679
Query: 367 LKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMD---AYGK 423
++ V ++ L+ K +E MM+++ K+ +G + N ++ ++ A G
Sbjct: 680 MESSFSVVSIGLLNQLLHLLGKSGKIESMMKLFYKIIGSGAEINCNTYSILLKNLLAVGN 739
Query: 424 NKDFDSAVVWYKE 436
+ + + W +E
Sbjct: 740 WRKYIEVLEWMEE 752
>gi|357499975|ref|XP_003620276.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495291|gb|AES76494.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 590
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 107/382 (28%), Positives = 197/382 (51%), Gaps = 8/382 (2%)
Query: 92 WDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAE 151
+ F+++ + LI K G+ A +L ++ P+VV + ++++ + A
Sbjct: 186 FHFDQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVVMYNTIIDSMCKVKLVNEAF 245
Query: 152 AIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMI 211
+F M S G P +TY ++ F K K+A ++F ++ E +KPD F++++
Sbjct: 246 DLFSEMVSKGISPDVVTYSALISGFCILGKLKDAIDLFNKMILEN---IKPDVYTFNILV 302
Query: 212 YMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSK---IYDQMQRAGLQ 268
+ K G ++ + +F +M ++G++ + VTYNSLM KEV+K I++ M + G+
Sbjct: 303 NAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQGGVN 362
Query: 269 PDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTV 328
PD+ SY+++IN + K ++ +EA+ +F+EM + P Y+ L+D + SG + A +
Sbjct: 363 PDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYALQL 422
Query: 329 FKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAK 388
M P+IC+Y ++L A ++ A + K GF P++ TY LIKG +
Sbjct: 423 VDQMHDRGVPPNICTYNSILDALCKTHQVDKAIALLTKFKDKGFQPDISTYSILIKGLCQ 482
Query: 389 VNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKA 448
LE ++++ + V G + +T ++ + F+ A+ +ME G PD K
Sbjct: 483 SGKLEDARKVFEDLLVKGYNLDVYAYTIMIQGFCVEGLFNEALALLSKMEDNGCIPDAKT 542
Query: 449 -KNILLSLAKTADERNEANELL 469
+ I+LSL K DE + A +LL
Sbjct: 543 YEIIILSLFK-KDENDMAEKLL 563
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 95/394 (24%), Positives = 198/394 (50%), Gaps = 10/394 (2%)
Query: 63 VLGTLVRLKQLKKWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFM 122
+LG+LV+ K +S+ +E+ I+ N ++ +LI + + G A V + +
Sbjct: 91 ILGSLVKSKHYHTVLYLSQKMEFRGIKP----NLVNCNILINCFCQLGLIPFAFSVFAKI 146
Query: 123 NKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKF 182
K GY P ++ T L + G+ + A ++ + G ++Y ++ + +
Sbjct: 147 LKMGYVPDTITFTTLSKGLCLKGQIQQAFLFHDKVVALGFHFDQISYGTLIHGLCKVGET 206
Query: 183 KEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTY 242
+ A ++ + + + ++P+ M++ +I K +A LF+ M +G+ VTY
Sbjct: 207 RAALDLLQRV---DGNLVQPNVVMYNTIIDSMCKVKLVNEAFDLFSEMVSKGISPDVVTY 263
Query: 243 NSLMS---FETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLD 299
++L+S K+ ++++M ++PDV ++ +L+NA+ K + +E VF+ M+
Sbjct: 264 SALISGFCILGKLKDAIDLFNKMILENIKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMK 323
Query: 300 AGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEG 359
G++P YN L+D + + V++A+++F M + +PDI SY+ M++ + +
Sbjct: 324 QGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQGGVNPDIQSYSIMINGFCKIKKFDE 383
Query: 360 AEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMD 419
A F+ + + +P+V+TY +LI G +K + +++ D+M G+ PN + +I+D
Sbjct: 384 AMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYALQLVDQMHDRGVPPNICTYNSILD 443
Query: 420 AYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILL 453
A K D A+ + + GF PD +IL+
Sbjct: 444 ALCKTHQVDKAIALLTKFKDKGFQPDISTYSILI 477
Score = 139 bits (349), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 92/334 (27%), Positives = 163/334 (48%), Gaps = 6/334 (1%)
Query: 113 NKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQII 172
N+A + S M KG +P VV+++AL+ + G+ K+A +F +M +P T+ I+
Sbjct: 242 NEAFDLFSEMVSKGISPDVVTYSALISGFCILGKLKDAIDLFNKMILENIKPDVYTFNIL 301
Query: 173 LKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAE 232
+ F + K KE + VF ++ K +KP+ ++ ++ Y KA+ +F MA+
Sbjct: 302 VNAFCKDGKMKEGKTVFDMMM---KQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQ 358
Query: 233 RGVQQSTVTYNSLMSFETNYK---EVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEE 289
GV +Y+ +++ K E ++ +M R + PDVV+Y+ LI+ K+ R
Sbjct: 359 GGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISY 418
Query: 290 ALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLS 349
AL + ++M D GV P YN +LDA + VD+A + + PDI +Y+ ++
Sbjct: 419 ALQLVDQMHDRGVPPNICTYNSILDALCKTHQVDKAIALLTKFKDKGFQPDISTYSILIK 478
Query: 350 AYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKP 409
+ +E A K F L G+ +V Y +I+G+ + + + KM NG P
Sbjct: 479 GLCQSGKLEDARKVFEDLLVKGYNLDVYAYTIMIQGFCVEGLFNEALALLSKMEDNGCIP 538
Query: 410 NQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFP 443
+ + I+ + K + D A +EM + G P
Sbjct: 539 DAKTYEIIILSLFKKDENDMAEKLLREMIARGLP 572
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 86/372 (23%), Positives = 175/372 (47%), Gaps = 10/372 (2%)
Query: 122 MNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANK 181
M +G P++V+ L+ + + G A ++F ++ G P +T+ + K +
Sbjct: 111 MEFRGIKPNLVNCNILINCFCQLGLIPFAFSVFAKILKMGYVPDTITFTTLSKGLCLKGQ 170
Query: 182 FKEAEEVFMTLLDEEKSPL--KPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQST 239
++A L ++ L DQ + +I+ K G A L + VQ +
Sbjct: 171 IQQA-----FLFHDKVVALGFHFDQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNV 225
Query: 240 VTYNSLMSFETNYKEVSKIYD---QMQRAGLQPDVVSYALLINAYGKARREEEALAVFEE 296
V YN+++ K V++ +D +M G+ PDVV+Y+ LI+ + + ++A+ +F +
Sbjct: 226 VMYNTIIDSMCKVKLVNEAFDLFSEMVSKGISPDVVTYSALISGFCILGKLKDAIDLFNK 285
Query: 297 MLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASD 356
M+ ++P +NIL++AF G + + +TVF M + P+ +Y +++ Y +
Sbjct: 286 MILENIKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKE 345
Query: 357 MEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTT 416
+ A+ F + Q G P++ +Y +I G+ K+ ++ M ++ +M I P+ +++
Sbjct: 346 VNKAKSIFNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSS 405
Query: 417 IMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPN 476
++D K+ A+ +M G PP+ N +L + ++A LL F
Sbjct: 406 LIDGLSKSGRISYALQLVDQMHDRGVPPNICTYNSILDALCKTHQVDKAIALLTKFKDKG 465
Query: 477 NEPGINGLSISV 488
+P I+ SI +
Sbjct: 466 FQPDISTYSILI 477
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 78/361 (21%), Positives = 160/361 (44%), Gaps = 6/361 (1%)
Query: 132 VSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMT 191
+S+++ + +A ++F R+ P A + IL V++ K V
Sbjct: 51 ISYSSTSTTFHSNNDVDDAVSLFNRLLRRNTTPPAFEFNKILGSLVKS---KHYHTVLYL 107
Query: 192 LLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSL---MSF 248
E +KP+ +++I + + G A +FA + + G T+T+ +L +
Sbjct: 108 SQKMEFRGIKPNLVNCNILINCFCQLGLIPFAFSVFAKILKMGYVPDTITFTTLSKGLCL 167
Query: 249 ETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKA 308
+ ++ +D++ G D +SY LI+ K AL + + + V+P
Sbjct: 168 KGQIQQAFLFHDKVVALGFHFDQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVVM 227
Query: 309 YNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLK 368
YN ++D+ +V++A +F M SPD+ +Y+ ++S + ++ A F ++
Sbjct: 228 YNTIIDSMCKVKLVNEAFDLFSEMVSKGISPDVVTYSALISGFCILGKLKDAIDLFNKMI 287
Query: 369 QDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFD 428
+ P+V T+ L+ + K +++ ++D M GIKPN + ++MD Y K+ +
Sbjct: 288 LENIKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVN 347
Query: 429 SAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGINGLSISV 488
A + M G PD ++ +I+++ + +EA L + N P + S +
Sbjct: 348 KAKSIFNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLI 407
Query: 489 D 489
D
Sbjct: 408 D 408
>gi|255539196|ref|XP_002510663.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223551364|gb|EEF52850.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 695
Score = 169 bits (429), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 106/409 (25%), Positives = 204/409 (49%), Gaps = 9/409 (2%)
Query: 52 RTRGQPLPKDLVLGTLVRLKQLKKWNVVSEVLEWLRIQSWWDFNEMDFLM---LITAYGK 108
R R P D V +L+ ++ + S +L+ L + D E+D + +I + K
Sbjct: 209 RMRQDGYPSDFVNYSLIIQSLVRSNRIDSPILQKLYSEIQCDKLELDVQLSNDIIVGFAK 268
Query: 109 QGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALT 168
GD NKA + L + G +P + A++ A G GR AEAIF M+ +G +P
Sbjct: 269 AGDPNKAMEFLGMVQASGLSPRTATLIAVISALGDSGRIIEAEAIFEEMKDNGLKPKTRA 328
Query: 169 YQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFA 228
Y +LK +V+A K+AE + + E+S + PD+ + ++I Y AG +E AR +
Sbjct: 329 YNGLLKGYVKAGMLKDAEFIVSEM---ERSGVSPDECTYSLLIDAYSNAGRWESARIVLK 385
Query: 229 LMAERGVQQSTVTYNSLMSFETNYKEVSK---IYDQMQRAGLQPDVVSYALLINAYGKAR 285
M + ++ ++ +++ + E K + +M+ +G++PD Y ++I+ +GK
Sbjct: 386 EMEANNIMPNSYVFSRILASYRDRGEWQKSFQVLKEMKNSGVRPDRHFYNVMIDTFGKFS 445
Query: 286 REEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYT 345
+ A+ F++ML G++P +N L+D + + ++A +F+ M SP + ++
Sbjct: 446 CLDHAMDTFDKMLSEGIQPDTVTWNTLIDCHCKAELHERAEELFEEMMEKGFSPCVTTFN 505
Query: 346 TMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVN 405
M++++ + + ++ G +PNV+TY TLI Y K +E + M+
Sbjct: 506 IMINSFGEQERWDDVKTLMGNMRSLGLLPNVVTYTTLIDIYGKSGRFSDAIECLEDMKSA 565
Query: 406 GIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLS 454
G+KP+ T++ +++AY + + AV ++ M + P A N L++
Sbjct: 566 GLKPSSTMYNALINAYAQKGLSEQAVNAFRLMRADSLKPSLLALNSLIN 614
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 92/322 (28%), Positives = 172/322 (53%), Gaps = 10/322 (3%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
+E + +LI AY G + A VL M P+ + ++ +Y G ++ + +
Sbjct: 360 DECTYSLLIDAYSNAGRWESARIVLKEMEANNIMPNSYVFSRILASYRDRGEWQKSFQVL 419
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
+ M++SG RP Y +++ F + + A + F +L E ++PD ++ +I +
Sbjct: 420 KEMKNSGVRPDRHFYNVMIDTFGKFSCLDHAMDTFDKMLSEG---IQPDTVTWNTLIDCH 476
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSLM-SF--ETNYKEVSKIYDQMQRAGLQPDV 271
KA +E+A +LF M E+G T+N ++ SF + + +V + M+ GL P+V
Sbjct: 477 CKAELHERAEELFEEMMEKGFSPCVTTFNIMINSFGEQERWDDVKTLMGNMRSLGLLPNV 536
Query: 272 VSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKC 331
V+Y LI+ YGK+ R +A+ E+M AG++P+ YN L++A+A G+ +QA F+
Sbjct: 537 VTYTTLIDIYGKSGRFSDAIECLEDMKSAGLKPSSTMYNALINAYAQKGLSEQAVNAFRL 596
Query: 332 MRRDRCSPDICSYTTMLSAYVNASDMEGAEKF--FRRLKQDGFVPNVITYGTLIKGYAKV 389
MR D P + + ++++A+ D AE F + +K++ P+V+TY TL+K +V
Sbjct: 597 MRADSLKPSLLALNSLINAF--GEDRRDAEAFSVLKYMKENDLKPDVVTYTTLMKALIRV 654
Query: 390 NNLEKMMEIYDKMRVNGIKPNQ 411
+ K+ +Y++M + G P++
Sbjct: 655 DKFNKVPSVYEEMILAGCTPDR 676
Score = 135 bits (339), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 98/409 (23%), Positives = 180/409 (44%), Gaps = 40/409 (9%)
Query: 82 VLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAY 141
V+ WL+ + E+ + +LI A G+ +A F+ + A S +++ AL+ A
Sbjct: 140 VVSWLQKHNLCFSYELLYSILIHALGRSEKLYEA-----FLLSQQQALSPLTYNALINAC 194
Query: 142 GRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDE-EKSPL 200
R + A + RM+ G + Y +I++ V +N+ + L E + L
Sbjct: 195 ARNNDLEKAINLISRMRQDGYPSDFVNYSLIIQSLVRSNRIDSP--ILQKLYSEIQCDKL 252
Query: 201 KPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSKIYD 260
+ D ++ + +I + KAG KA + ++
Sbjct: 253 ELDVQLSNDIIVGFAKAGDPNKAMEFLGMV------------------------------ 282
Query: 261 QMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISG 320
Q +GL P + +I+A G + R EA A+FEEM D G++P +AYN LL + +G
Sbjct: 283 --QASGLSPRTATLIAVISALGDSGRIIEAEAIFEEMKDNGLKPKTRAYNGLLKGYVKAG 340
Query: 321 MVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYG 380
M+ A + M R SPD C+Y+ ++ AY NA E A + ++ + +PN +
Sbjct: 341 MLKDAEFIVSEMERSGVSPDECTYSLLIDAYSNAGRWESARIVLKEMEANNIMPNSYVFS 400
Query: 381 TLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESC 440
++ Y +K ++ +M+ +G++P++ + ++D +GK D A+ + +M S
Sbjct: 401 RILASYRDRGEWQKSFQVLKEMKNSGVRPDRHFYNVMIDTFGKFSCLDHAMDTFDKMLSE 460
Query: 441 GFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGINGLSISVD 489
G PD N L+ A+ A EL P + +I ++
Sbjct: 461 GIQPDTVTWNTLIDCHCKAELHERAEELFEEMMEKGFSPCVTTFNIMIN 509
>gi|449438705|ref|XP_004137128.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
mitochondrial-like [Cucumis sativus]
Length = 628
Score = 169 bits (428), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 101/398 (25%), Positives = 197/398 (49%), Gaps = 13/398 (3%)
Query: 76 WNVVSEVLEWLRIQS-WWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSH 134
W + +E+ LRI+S + FN ++I K+G KA+ + M G P++V++
Sbjct: 206 WVLYAEMFR-LRIKSSVYTFN-----IMINVLCKEGKLKKAKDFVGHMETSGVKPNIVTY 259
Query: 135 TALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLD 194
++ Y GR + A+AI M+ P + TY ++ + + +EA ++F ++
Sbjct: 260 NTIVHGYCSSGRVEAADAILTTMKRQKIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQ 319
Query: 195 EEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMS---FETN 251
+ L+P +++ +I + G + A M ++G+ + TYNSL+ E
Sbjct: 320 KG---LRPSAVIYNTLIDGFCNKGNLDMASAYKDEMLKKGISPTMSTYNSLIHALFMEQR 376
Query: 252 YKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNI 311
E + ++Q G+ PD ++Y +LIN Y + ++A + +EML +G++PT K Y
Sbjct: 377 TDEAECMIKEIQEKGISPDAITYNILINGYCRCANAKKAFLLHDEMLASGIKPTKKTYTS 436
Query: 312 LLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDG 371
LL + + +A +FK + + PD+ + ++ + + S+++GA + + + +
Sbjct: 437 LLHVLSKKNRMKEADDLFKKITSEGVLPDVIMFNALIDGHCSNSNVKGAFELLKDMDRMK 496
Query: 372 FVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAV 431
P+ +T+ T+++G+ + +E+ E++D+M+ GIKP+ F T++ Y + D A
Sbjct: 497 VPPDEVTFNTIMQGHCREGKVEEARELFDEMKRRGIKPDHISFNTLISGYSRRGDIKDAF 556
Query: 432 VWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELL 469
EM GF P N L+ E + A ELL
Sbjct: 557 RVRNEMLDTGFNPTVLTYNALVQGLCKNQEGDLAEELL 594
Score = 135 bits (340), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 88/365 (24%), Positives = 175/365 (47%), Gaps = 9/365 (2%)
Query: 111 DFNKAEKVLSF---MNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSAL 167
D N+A++ M +KG P++ + +L+ + + R + A ++ M + S
Sbjct: 163 DMNRADEAFECFYTMKEKGVLPTIETCNSLLSLFLKLNRTEAAWVLYAEMFRLRIKSSVY 222
Query: 168 TYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLF 227
T+ I++ + + K K+A++ + E S +KP+ ++ +++ Y +G E A +
Sbjct: 223 TFNIMINVLCKEGKLKKAKDFVGHM---ETSGVKPNIVTYNTIVHGYCSSGRVEAADAIL 279
Query: 228 ALMAERGVQQSTVTYNSLMSF---ETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKA 284
M + ++ + TY SL+S + +E SKI+++M + GL+P V Y LI+ +
Sbjct: 280 TTMKRQKIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAVIYNTLIDGFCNK 339
Query: 285 RREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSY 344
+ A A +EML G+ PT YN L+ A + D+A + K ++ SPD +Y
Sbjct: 340 GNLDMASAYKDEMLKKGISPTMSTYNSLIHALFMEQRTDEAECMIKEIQEKGISPDAITY 399
Query: 345 TTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRV 404
+++ Y ++ + A + G P TY +L+ +K N +++ +++ K+
Sbjct: 400 NILINGYCRCANAKKAFLLHDEMLASGIKPTKKTYTSLLHVLSKKNRMKEADDLFKKITS 459
Query: 405 NGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNE 464
G+ P+ +F ++D + N + A K+M+ PPD+ N ++ + E
Sbjct: 460 EGVLPDVIMFNALIDGHCSNSNVKGAFELLKDMDRMKVPPDEVTFNTIMQGHCREGKVEE 519
Query: 465 ANELL 469
A EL
Sbjct: 520 ARELF 524
Score = 124 bits (312), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 89/326 (27%), Positives = 155/326 (47%), Gaps = 8/326 (2%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
LI+ KQG +A K+ M +KG PS V + L++ + G A A M G
Sbjct: 297 LISGMCKQGRLEEASKIFEEMVQKGLRPSAVIYNTLIDGFCNKGNLDMASAYKDEMLKKG 356
Query: 162 PRPSALTY-QIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGY 220
P+ TY +I LF+E + EAE + + +EK + PD ++++I Y +
Sbjct: 357 ISPTMSTYNSLIHALFME-QRTDEAECMIKEI--QEKG-ISPDAITYNILINGYCRCANA 412
Query: 221 EKARKLFALMAERGVQQSTVTYNSLM---SFETNYKEVSKIYDQMQRAGLQPDVVSYALL 277
+KA L M G++ + TY SL+ S + KE ++ ++ G+ PDV+ + L
Sbjct: 413 KKAFLLHDEMLASGIKPTKKTYTSLLHVLSKKNRMKEADDLFKKITSEGVLPDVIMFNAL 472
Query: 278 INAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRC 337
I+ + + A + ++M V P +N ++ G V++AR +F M+R
Sbjct: 473 IDGHCSNSNVKGAFELLKDMDRMKVPPDEVTFNTIMQGHCREGKVEEARELFDEMKRRGI 532
Query: 338 SPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMME 397
PD S+ T++S Y D++ A + + GF P V+TY L++G K + E
Sbjct: 533 KPDHISFNTLISGYSRRGDIKDAFRVRNEMLDTGFNPTVLTYNALVQGLCKNQEGDLAEE 592
Query: 398 IYDKMRVNGIKPNQTIFTTIMDAYGK 423
+ +M G+ P+ T + T+++ K
Sbjct: 593 LLKEMVSKGMTPDDTTYFTLIEGIAK 618
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 87/356 (24%), Positives = 171/356 (48%), Gaps = 13/356 (3%)
Query: 41 VGSAVAVLRSERTRGQPLPKDLVLGTLVR-LKQLKKWNVVSEVLEWLRIQSWWDFNEMDF 99
V +A A+L + + R + P G+L+ + + + S++ E + +Q + + +
Sbjct: 272 VEAADAILTTMK-RQKIEPDSFTYGSLISGMCKQGRLEEASKIFEEM-VQKGLRPSAVIY 329
Query: 100 LMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQS 159
LI + +G+ + A M KKG +P++ ++ +L+ A R AE + + +Q
Sbjct: 330 NTLIDGFCNKGNLDMASAYKDEMLKKGISPTMSTYNSLIHALFMEQRTDEAECMIKEIQE 389
Query: 160 SGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEE--KSPLKPDQKMFHMMIYMYKKA 217
G P A+TY I++ + K+A LL +E S +KP +K + ++++ K
Sbjct: 390 KGISPDAITYNILINGYCRCANAKKA-----FLLHDEMLASGIKPTKKTYTSLLHVLSKK 444
Query: 218 GGYEKARKLFALMAERGVQQSTVTYNSLM---SFETNYKEVSKIYDQMQRAGLQPDVVSY 274
++A LF + GV + +N+L+ +N K ++ M R + PD V++
Sbjct: 445 NRMKEADDLFKKITSEGVLPDVIMFNALIDGHCSNSNVKGAFELLKDMDRMKVPPDEVTF 504
Query: 275 ALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRR 334
++ + + + EEA +F+EM G++P H ++N L+ ++ G + A V M
Sbjct: 505 NTIMQGHCREGKVEEARELFDEMKRRGIKPDHISFNTLISGYSRRGDIKDAFRVRNEMLD 564
Query: 335 DRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVN 390
+P + +Y ++ + + AE+ + + G P+ TY TLI+G AKVN
Sbjct: 565 TGFNPTVLTYNALVQGLCKNQEGDLAEELLKEMVSKGMTPDDTTYFTLIEGIAKVN 620
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/225 (22%), Positives = 90/225 (40%), Gaps = 36/225 (16%)
Query: 264 RAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVD 323
R G + +V + LI + R +EA F M + GV PT + N LL F +
Sbjct: 145 RLGFKSSIV-FDYLIKSCCDMNRADEAFECFYTMKEKGVLPTIETCNSLLSLFLKLNRTE 203
Query: 324 QARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLI 383
A ++ M R R + ++ M++ ++ A+ F ++ G PN++TY T++
Sbjct: 204 AAWVLYAEMFRLRIKSSVYTFNIMINVLCKEGKLKKAKDFVGHMETSGVKPNIVTYNTIV 263
Query: 384 KGY-----------------------------------AKVNNLEKMMEIYDKMRVNGIK 408
GY K LE+ +I+++M G++
Sbjct: 264 HGYCSSGRVEAADAILTTMKRQKIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLR 323
Query: 409 PNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILL 453
P+ I+ T++D + + D A + EM G P N L+
Sbjct: 324 PSAVIYNTLIDGFCNKGNLDMASAYKDEMLKKGISPTMSTYNSLI 368
>gi|297795313|ref|XP_002865541.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297311376|gb|EFH41800.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 711
Score = 169 bits (427), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 109/425 (25%), Positives = 210/425 (49%), Gaps = 14/425 (3%)
Query: 36 NQIEEVGSAVAVLRSERTRGQPLPKDLVLGTLVRLKQLKKWNVVSEVLEWLRIQSWWDFN 95
N IE+ + ++ +R + + + LV+ +L R ++ S +L+ L + D
Sbjct: 213 NDIEKALNLISRMRQDGYQSDFVNYSLVIQSLTRCNKID-----SVMLQRLYKEIERDKL 267
Query: 96 EMDFLM---LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEA 152
E+D + +I + K GD ++A ++L G + + +++ A GR AEA
Sbjct: 268 ELDVQLVNDIIMGFAKSGDPSRALQLLGMAQATGLSAKTATLVSIISALANSGRTLEAEA 327
Query: 153 IFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIY 212
+F ++ SG +P Y +LK +V+ K+AE + + + EK + PD+ + ++I
Sbjct: 328 LFEELRQSGIKPRTKAYNALLKGYVKTGPLKDAE---LMVSEMEKRGVSPDEHTYSLLID 384
Query: 213 MYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSKIYD---QMQRAGLQP 269
Y AG +E AR + M VQ ++ ++ L++ + E K + +M+ G++P
Sbjct: 385 AYVNAGRWESARIVLKEMETGDVQPNSFVFSRLLAGYRDRGEWQKTFQVLKEMKSIGVKP 444
Query: 270 DVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVF 329
D Y ++I+ +GK + A+ F+ ML G+ P +N L+D G A +F
Sbjct: 445 DRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMF 504
Query: 330 KCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKV 389
+ M R C P +Y M+++Y + + ++ ++K G +PNV+T+ TL+ Y K
Sbjct: 505 EAMERRGCLPCATTYNIMINSYGDQERWDDMKRLLGKMKSQGILPNVVTHTTLVDVYGKS 564
Query: 390 NNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAK 449
+E ++M+ G+KP+ T++ +++AY + + AV ++ M S G P A
Sbjct: 565 GRFNDAIECLEEMKSVGLKPSSTMYNALINAYAQRGLSEQAVNAFRVMTSDGLKPSLLAL 624
Query: 450 NILLS 454
N L++
Sbjct: 625 NSLIN 629
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 88/356 (24%), Positives = 174/356 (48%), Gaps = 6/356 (1%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
L+ Y K G AE ++S M K+G +P +++ L++AY GR+++A + + M++
Sbjct: 347 LLKGYVKTGPLKDAELMVSEMEKRGVSPDEHTYSLLIDAYVNAGRWESARIVLKEMETGD 406
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
+P++ + +L + + E ++ F L + + +KPD++ ++++I + K +
Sbjct: 407 VQPNSFVFSRLLAGYRDRG---EWQKTFQVLKEMKSIGVKPDRQFYNVVIDTFGKFNCLD 463
Query: 222 KARKLFALMAERGVQQSTVTYNSLMSFETNYKE---VSKIYDQMQRAGLQPDVVSYALLI 278
A F M G++ VT+N+L+ + ++++ M+R G P +Y ++I
Sbjct: 464 HAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMERRGCLPCATTYNIMI 523
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCS 338
N+YG R ++ + +M G+ P + L+D + SG + A + M+
Sbjct: 524 NSYGDQERWDDMKRLLGKMKSQGILPNVVTHTTLVDVYGKSGRFNDAIECLEEMKSVGLK 583
Query: 339 PDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEI 398
P Y +++AY E A FR + DG P+++ +LI + + + +
Sbjct: 584 PSSTMYNALINAYAQRGLSEQAVNAFRVMTSDGLKPSLLALNSLINAFGEDRRDAEAFAV 643
Query: 399 YDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLS 454
M+ NG+KP+ +TT+M A + F Y+EM G PD+KA+++L S
Sbjct: 644 LQYMKENGVKPDVVTYTTLMKALIRVDKFQKVPGVYEEMIMSGCKPDRKARSMLRS 699
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 93/412 (22%), Positives = 188/412 (45%), Gaps = 11/412 (2%)
Query: 82 VLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAY 141
V+ WL+ + E+ + +LI A G+ +A F+ + + +++ AL+ A
Sbjct: 155 VVSWLQKHNLCFSYELLYSILIHALGRSEKLYEA-----FLLSQKQTLTPLTYNALIGAC 209
Query: 142 GRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDE-EKSPL 200
R + A + RM+ G + + Y ++++ NK + L E E+ L
Sbjct: 210 ARNNDIEKALNLISRMRQDGYQSDFVNYSLVIQSLTRCNKIDSV--MLQRLYKEIERDKL 267
Query: 201 KPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYK---EVSK 257
+ D ++ + +I + K+G +A +L + G+ T T S++S N E
Sbjct: 268 ELDVQLVNDIIMGFAKSGDPSRALQLLGMAQATGLSAKTATLVSIISALANSGRTLEAEA 327
Query: 258 IYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFA 317
++++++++G++P +Y L+ Y K ++A + EM GV P Y++L+DA+
Sbjct: 328 LFEELRQSGIKPRTKAYNALLKGYVKTGPLKDAELMVSEMEKRGVSPDEHTYSLLIDAYV 387
Query: 318 ISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVI 377
+G + AR V K M P+ ++ +L+ Y + + + + + +K G P+
Sbjct: 388 NAGRWESARIVLKEMETGDVQPNSFVFSRLLAGYRDRGEWQKTFQVLKEMKSIGVKPDRQ 447
Query: 378 TYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEM 437
Y +I + K N L+ M +D+M GI+P++ + T++D + K+ A ++ M
Sbjct: 448 FYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAM 507
Query: 438 ESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGINGLSISVD 489
E G P NI+++ + ++ LLG P + + VD
Sbjct: 508 ERRGCLPCATTYNIMINSYGDQERWDDMKRLLGKMKSQGILPNVVTHTTLVD 559
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 63/244 (25%), Positives = 116/244 (47%), Gaps = 8/244 (3%)
Query: 101 MLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSS 160
++I +GK + A M +G P V+ L++ + + GR+ AE +F M+
Sbjct: 451 VVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMERR 510
Query: 161 GPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSP-LKPDQKMFHMMIYMYKKAGG 219
G P A TY I++ + + ++ + + LL + KS + P+ ++ +Y K+G
Sbjct: 511 GCLPCATTYNIMINSYGDQERWDDMKR----LLGKMKSQGILPNVVTHTTLVDVYGKSGR 566
Query: 220 YEKARKLFALMAERGVQQSTVTYNSLMSFETN---YKEVSKIYDQMQRAGLQPDVVSYAL 276
+ A + M G++ S+ YN+L++ ++ + M GL+P +++
Sbjct: 567 FNDAIECLEEMKSVGLKPSSTMYNALINAYAQRGLSEQAVNAFRVMTSDGLKPSLLALNS 626
Query: 277 LINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDR 336
LINA+G+ RR+ EA AV + M + GV+P Y L+ A + V++ M
Sbjct: 627 LINAFGEDRRDAEAFAVLQYMKENGVKPDVVTYTTLMKALIRVDKFQKVPGVYEEMIMSG 686
Query: 337 CSPD 340
C PD
Sbjct: 687 CKPD 690
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 78/189 (41%), Gaps = 41/189 (21%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + L+ YGK G FN A + L M G PS + AL+ AY + G + A F
Sbjct: 550 NVVTHTTLVDVYGKSGRFNDAIECLEEMKSVGLKPSSTMYNALINAYAQRGLSEQAVNAF 609
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
R M S G +PS L ++ F E + D + F ++ Y
Sbjct: 610 RVMTSDGLKPSLLALNSLINAFGEDRR---------------------DAEAFAVLQY-- 646
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFET---NYKEVSKIYDQMQRAGLQPDV 271
M E GV+ VTY +LM +++V +Y++M +G +PD
Sbjct: 647 ---------------MKENGVKPDVVTYTTLMKALIRVDKFQKVPGVYEEMIMSGCKPDR 691
Query: 272 VSYALLINA 280
+ ++L +A
Sbjct: 692 KARSMLRSA 700
>gi|356574297|ref|XP_003555285.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g02860-like [Glycine max]
Length = 794
Score = 169 bits (427), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 98/361 (27%), Positives = 183/361 (50%), Gaps = 6/361 (1%)
Query: 101 MLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSS 160
++++ GK G ++A +L + G+ V +T+L+ AY +Y++A +F +M+
Sbjct: 149 VIVSILGKTGRVSRAASLLHNLEADGFEVDVYGYTSLITAYANNKKYRDALKVFGKMKEV 208
Query: 161 GPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGY 220
G P+ +TY IL ++ + ++ + D + L PD ++ +I + Y
Sbjct: 209 GCEPTLITYNAILNVYGKMGM--PWAKIIALVQDMKCHGLAPDLCTYNTLISCCRAGSLY 266
Query: 221 EKARKLFALMAERGVQQSTVTYNSLMSF---ETNYKEVSKIYDQMQRAGLQPDVVSYALL 277
E+A LF + G + VTYN+L+ KE ++ QM+ +P VV+Y L
Sbjct: 267 EEALDLFEEIKVAGFRPDAVTYNALLDVYGKSRRPKEAMEVLKQMESNSFRPSVVTYNSL 326
Query: 278 INAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRC 337
++AY + E+AL + +M+D G++P Y LL F +G + A VF+ MR+ C
Sbjct: 327 VSAYVRGGLLEDALVLKRKMVDKGIKPDVYTYTTLLSGFVNAGKEELAMEVFEEMRKVGC 386
Query: 338 SPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMME 397
P+IC++ ++ Y + E K F+ +K P+++T+ TL+ + + ++
Sbjct: 387 KPNICTFNALIKMYGDRGKFEEMVKVFKEIKVCKCSPDIVTWNTLLAVFGQNGMDSEVSG 446
Query: 398 IYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKN-ILLSLA 456
++++M+ + P + F T++ AYG+ FD A+ YK M G PD N +L +LA
Sbjct: 447 VFEEMKRSRFAPERDTFNTLISAYGRCGSFDQAMAAYKRMLEAGVSPDLSTYNAVLATLA 506
Query: 457 K 457
+
Sbjct: 507 R 507
Score = 162 bits (410), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 113/418 (27%), Positives = 198/418 (47%), Gaps = 41/418 (9%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
L+ YGK +A +VL M + PSVV++ +L+ AY RGG ++A + R+M G
Sbjct: 291 LLDVYGKSRRPKEAMEVLKQMESNSFRPSVVTYNSLVSAYVRGGLLEDALVLKRKMVDKG 350
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
+P TY +L FV A K + A EVF + K KP+ F+ +I MY G +E
Sbjct: 351 IKPDVYTYTTLLSGFVNAGKEELAMEVFEEM---RKVGCKPNICTFNALIKMYGDRGKFE 407
Query: 222 KARKLFALMAERGVQQSTVTYNSLMS-FETNY--KEVSKIYDQMQRAGLQPDVVSYALLI 278
+ K+F + VT+N+L++ F N EVS ++++M+R+ P+ ++ LI
Sbjct: 408 EMVKVFKEIKVCKCSPDIVTWNTLLAVFGQNGMDSEVSGVFEEMKRSRFAPERDTFNTLI 467
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCS 338
+AYG+ ++A+A ++ ML+AGV P YN +L A G+ +Q+ V M+ C
Sbjct: 468 SAYGRCGSFDQAMAAYKRMLEAGVSPDLSTYNAVLATLARGGLWEQSEKVLAEMKDGGCK 527
Query: 339 PDICSYTTMLSAYVNASDMEG-----------------------------------AEKF 363
P+ +Y+++L AY N ++E E+
Sbjct: 528 PNEVTYSSLLHAYANGREVERMNALAEEIYSGTIKTHAVLLKTLVLVNSKVDLLVETERA 587
Query: 364 FRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGK 423
F ++ G P+V T ++ Y + + K EI + M +G+ + T + ++M Y +
Sbjct: 588 FLEFRKRGISPDVTTSNAMLSIYGRKKMVPKANEILNFMYESGLTLSLTSYNSLMYMYSR 647
Query: 424 NKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGI 481
++F + ++E+ G PD + NI++ D +EA ++ P P +
Sbjct: 648 TENFHKSEQIFREILDKGIEPDVISYNIVIYAYCRNDMMDEAKRIIEEMKVPAPVPDV 705
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 91/324 (28%), Positives = 151/324 (46%), Gaps = 4/324 (1%)
Query: 136 ALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDE 195
+++ G ++ A ++F +++ R S L +I + K L +
Sbjct: 111 GIIKGLGFNNKFDLALSLFDFIRTRNDRVSLLNGSVIAVIVSILGKTGRVSRAASLLHNL 170
Query: 196 EKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETN---- 251
E + D + +I Y Y A K+F M E G + + +TYN++++
Sbjct: 171 EADGFEVDVYGYTSLITAYANNKKYRDALKVFGKMKEVGCEPTLITYNAILNVYGKMGMP 230
Query: 252 YKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNI 311
+ ++ + M+ GL PD+ +Y LI+ EEAL +FEE+ AG RP YN
Sbjct: 231 WAKIIALVQDMKCHGLAPDLCTYNTLISCCRAGSLYEEALDLFEEIKVAGFRPDAVTYNA 290
Query: 312 LLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDG 371
LLD + S +A V K M + P + +Y +++SAYV +E A R++ G
Sbjct: 291 LLDVYGKSRRPKEAMEVLKQMESNSFRPSVVTYNSLVSAYVRGGLLEDALVLKRKMVDKG 350
Query: 372 FVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAV 431
P+V TY TL+ G+ E ME++++MR G KPN F ++ YG F+ V
Sbjct: 351 IKPDVYTYTTLLSGFVNAGKEELAMEVFEEMRKVGCKPNICTFNALIKMYGDRGKFEEMV 410
Query: 432 VWYKEMESCGFPPDQKAKNILLSL 455
+KE++ C PD N LL++
Sbjct: 411 KVFKEIKVCKCSPDIVTWNTLLAV 434
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 87/412 (21%), Positives = 175/412 (42%), Gaps = 41/412 (9%)
Query: 99 FLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQ 158
+ L++ + G A +V M K G P++ + AL++ YG G+++ +F+ ++
Sbjct: 358 YTTLLSGFVNAGKEELAMEVFEEMRKVGCKPNICTFNALIKMYGDRGKFEEMVKVFKEIK 417
Query: 159 SSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAG 218
P +T+ +L +F + E VF + ++S P++ F+ +I Y + G
Sbjct: 418 VCKCSPDIVTWNTLLAVFGQNGMDSEVSGVFEEM---KRSRFAPERDTFNTLISAYGRCG 474
Query: 219 GYEKARKLFALMAERGVQQSTVTYNSLMSFETN---YKEVSKIYDQMQRAGLQPDVVSYA 275
+++A + M E GV TYN++++ +++ K+ +M+ G +P+ V+Y+
Sbjct: 475 SFDQAMAAYKRMLEAGVSPDLSTYNAVLATLARGGLWEQSEKVLAEMKDGGCKPNEVTYS 534
Query: 276 LLINAYGKARREEEALAVFEEMLDA----------------------------------- 300
L++AY R E A+ EE+
Sbjct: 535 SLLHAYANGREVERMNALAEEIYSGTIKTHAVLLKTLVLVNSKVDLLVETERAFLEFRKR 594
Query: 301 GVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGA 360
G+ P N +L + MV +A + M + + SY +++ Y + +
Sbjct: 595 GISPDVTTSNAMLSIYGRKKMVPKANEILNFMYESGLTLSLTSYNSLMYMYSRTENFHKS 654
Query: 361 EKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDA 420
E+ FR + G P+VI+Y +I Y + + +++ I ++M+V P+ + T + A
Sbjct: 655 EQIFREILDKGIEPDVISYNIVIYAYCRNDMMDEAKRIIEEMKVPAPVPDVVTYNTFIAA 714
Query: 421 YGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNF 472
Y + F A+ + M G P+ N ++ R+EA + N
Sbjct: 715 YAADSMFVEAIDVIRYMIKQGCKPNHNTYNSIVDWYCKLKLRDEACSFVQNL 766
Score = 101 bits (252), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 106/227 (46%), Gaps = 1/227 (0%)
Query: 256 SKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDA 315
+ + ++ G + DV Y LI AY ++ +AL VF +M + G PT YN +L+
Sbjct: 164 ASLLHNLEADGFEVDVYGYTSLITAYANNKKYRDALKVFGKMKEVGCEPTLITYNAILNV 223
Query: 316 FAISGMV-DQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVP 374
+ GM + + + M+ +PD+C+Y T++S S E A F +K GF P
Sbjct: 224 YGKMGMPWAKIIALVQDMKCHGLAPDLCTYNTLISCCRAGSLYEEALDLFEEIKVAGFRP 283
Query: 375 NVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWY 434
+ +TY L+ Y K ++ ME+ +M N +P+ + +++ AY + + A+V
Sbjct: 284 DAVTYNALLDVYGKSRRPKEAMEVLKQMESNSFRPSVVTYNSLVSAYVRGGLLEDALVLK 343
Query: 435 KEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGI 481
++M G PD LLS A + A E+ +P I
Sbjct: 344 RKMVDKGIKPDVYTYTTLLSGFVNAGKEELAMEVFEEMRKVGCKPNI 390
>gi|15224671|ref|NP_180698.1| genomes uncoupled 1 protein [Arabidopsis thaliana]
gi|75206083|sp|Q9SIC9.1|PP178_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At2g31400, chloroplastic; Flags: Precursor
gi|4589961|gb|AAD26479.1| unknown protein [Arabidopsis thaliana]
gi|330253448|gb|AEC08542.1| genomes uncoupled 1 protein [Arabidopsis thaliana]
Length = 918
Score = 169 bits (427), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 101/357 (28%), Positives = 187/357 (52%), Gaps = 9/357 (2%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
+I+ G+ G A+++ GY +V + +AL+ AYGR G ++ A ++F M+ G
Sbjct: 239 MISTLGRYGKVTIAKRIFETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNSMKEYG 298
Query: 162 PRPSALTYQIILKLFVEAN-KFKEAEEVFMTLLDE-EKSPLKPDQKMFHMMIYMYKKAGG 219
RP+ +TY ++ + +FK+ + F DE +++ ++PD+ F+ ++ + + G
Sbjct: 299 LRPNLVTYNAVIDACGKGGMEFKQVAKFF----DEMQRNGVQPDRITFNSLLAVCSRGGL 354
Query: 220 YEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVS---KIYDQMQRAGLQPDVVSYAL 276
+E AR LF M R ++Q +YN+L+ ++ +I QM + P+VVSY+
Sbjct: 355 WEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYST 414
Query: 277 LINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDR 336
+I+ + KA R +EAL +F EM G+ +YN LL + G ++A + + M
Sbjct: 415 VIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVG 474
Query: 337 CSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMM 396
D+ +Y +L Y + +K F +K++ +PN++TY TLI GY+K ++ M
Sbjct: 475 IKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAM 534
Query: 397 EIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILL 453
EI+ + + G++ + +++ ++DA KN SAV EM G P+ N ++
Sbjct: 535 EIFREFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEGISPNVVTYNSII 591
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 70/253 (27%), Positives = 126/253 (49%), Gaps = 4/253 (1%)
Query: 205 KMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETN---YKEVSKIYDQ 261
K+ MI + G A+++F G + +++L+S ++E +++
Sbjct: 234 KLASAMISTLGRYGKVTIAKRIFETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNS 293
Query: 262 MQRAGLQPDVVSYALLINAYGKARREEEALA-VFEEMLDAGVRPTHKAYNILLDAFAISG 320
M+ GL+P++V+Y +I+A GK E + +A F+EM GV+P +N LL + G
Sbjct: 294 MKEYGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGG 353
Query: 321 MVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYG 380
+ + AR +F M R D+ SY T+L A M+ A + ++ +PNV++Y
Sbjct: 354 LWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYS 413
Query: 381 TLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESC 440
T+I G+AK ++ + ++ +MR GI ++ + T++ Y K + A+ +EM S
Sbjct: 414 TVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASV 473
Query: 441 GFPPDQKAKNILL 453
G D N LL
Sbjct: 474 GIKKDVVTYNALL 486
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 84/345 (24%), Positives = 150/345 (43%), Gaps = 53/345 (15%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + + +I + K G F++A + M G A VS+ L+ Y + GR + A I
Sbjct: 408 NVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDIL 467
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
R M S G + +TY +L + + K+ E ++VF + E + P+ + +I Y
Sbjct: 468 REMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREH---VLPNLLTYSTLIDGY 524
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSKIYDQMQRAGLQPDVVSY 274
K G Y++A ++F + + AGL+ DVV Y
Sbjct: 525 SKGGLYKEAMEIF--------------------------------REFKSAGLRADVVLY 552
Query: 275 ALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRR 334
+ LI+A K A+++ +EM G+ P YN ++DAF S +D++
Sbjct: 553 SALIDALCKNGLVGSAVSLIDEMTKEGISPNVVTYNSIIDAFGRSATMDRS--------A 604
Query: 335 DRCSPDICSYTTMLSAYVNASDMEGAE--KFFRRLKQDGFVPNVITYGTLIKGYAKVNNL 392
D + +++ SA ++ EG + F +L + N T +G + L
Sbjct: 605 DYSNGGSLPFSS--SALSALTETEGNRVIQLFGQLTTES---NNRTTKDCEEG---MQEL 656
Query: 393 EKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEM 437
++E++ KM IKPN F+ I++A + F+ A + +E+
Sbjct: 657 SCILEVFRKMHQLEIKPNVVTFSAILNACSRCNSFEDASMLLEEL 701
>gi|224103707|ref|XP_002313163.1| predicted protein [Populus trichocarpa]
gi|222849571|gb|EEE87118.1| predicted protein [Populus trichocarpa]
Length = 643
Score = 169 bits (427), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 99/362 (27%), Positives = 184/362 (50%), Gaps = 8/362 (2%)
Query: 101 MLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSS 160
++I GK+G + A +L+ ++K G+ P V ++T+L+ A GRY+ A +F++M+
Sbjct: 3 VIINMLGKEGKVSVAASLLNNLHKDGFEPDVYAYTSLITACVSNGRYREAVMVFKKMEEE 62
Query: 161 GPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSP-LKPDQKMFHMMIYMYKKAGG 219
G +P+ +TY +IL ++ K L + K+ + PD+ ++ +I ++
Sbjct: 63 GCKPTLITYNVILNVY---GKMGMPWNKITGLFEGMKNAGILPDEYTYNTLITCCRRGSL 119
Query: 220 YEKARKLFALMAERGVQQSTVTYNSLMSF---ETNYKEVSKIYDQMQRAGLQPDVVSYAL 276
YE+A +F M G VTYN+L+ KE ++ +M+ G P +V+Y
Sbjct: 120 YEEAAAVFEDMKSMGFVPDKVTYNTLLDVYGKSRRIKEAIEVLREMEVNGCSPSIVTYNS 179
Query: 277 LINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDR 336
LI+AY + EEA+ + +M++ G++ Y +L F +G + A VF+ MR
Sbjct: 180 LISAYARDGLLEEAMELKNQMVERGIKLDVFTYTAMLSGFVRTGKDESAMRVFEEMRTAG 239
Query: 337 CSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMM 396
C P+IC++ ++ + N K F +K VP+++T+ TL+ + + ++
Sbjct: 240 CKPNICTFNALIKMHGNRGKFAEMMKVFEEIKICCCVPDIVTWNTLLAVFGQNGMDSEVS 299
Query: 397 EIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKN-ILLSL 455
++ +M+ G P + + T++ AY + FD A+ YK M G PD N +L +L
Sbjct: 300 GVFKEMKRVGFVPERDTYNTLISAYSRCGSFDQAMAMYKRMLDTGITPDLSTYNAVLAAL 359
Query: 456 AK 457
A+
Sbjct: 360 AR 361
Score = 151 bits (382), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 99/410 (24%), Positives = 193/410 (47%), Gaps = 9/410 (2%)
Query: 76 WNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHT 135
WN ++ + E ++ +E + LIT + + +A V M G+ P V++
Sbjct: 85 WNKITGLFEGMKNAGILP-DEYTYNTLITCCRRGSLYEEAAAVFEDMKSMGFVPDKVTYN 143
Query: 136 ALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDE 195
L++ YG+ R K A + R M+ +G PS +TY ++ + +EA E+ +++
Sbjct: 144 TLLDVYGKSRRIKEAIEVLREMEVNGCSPSIVTYNSLISAYARDGLLEEAMELKNQMVER 203
Query: 196 EKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETN---Y 252
+K D + M+ + + G E A ++F M G + + T+N+L+ N +
Sbjct: 204 ---GIKLDVFTYTAMLSGFVRTGKDESAMRVFEEMRTAGCKPNICTFNALIKMHGNRGKF 260
Query: 253 KEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNIL 312
E+ K++++++ PD+V++ L+ +G+ + E VF+EM G P YN L
Sbjct: 261 AEMMKVFEEIKICCCVPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRVGFVPERDTYNTL 320
Query: 313 LDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGF 372
+ A++ G DQA ++K M +PD+ +Y +L+A E +EK + QDG
Sbjct: 321 ISAYSRCGSFDQAMAMYKRMLDTGITPDLSTYNAVLAALARGGLWEQSEKILAEM-QDGM 379
Query: 373 V-PNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAV 431
PN +T+ +L+ YA + +M+ + +++ I+P+ + T++ K A
Sbjct: 380 CKPNELTHCSLLHAYANGKEIGRMLALAEEICSGVIEPHAVLLKTLVLVNSKCDLLLEAE 439
Query: 432 VWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGI 481
+ E++ GF PD N ++++ + NE+L P +
Sbjct: 440 RAFLELKRKGFSPDLSTLNAMIAIYGRRQMVTKTNEILNFMKESGFTPSL 489
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 94/357 (26%), Positives = 178/357 (49%), Gaps = 9/357 (2%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGR-YKNAEAIFRRMQSS 160
LITA G + +A V M ++G P+++++ ++ YG+ G + +F M+++
Sbjct: 39 LITACVSNGRYREAVMVFKKMEEEGCKPTLITYNVILNVYGKMGMPWNKITGLFEGMKNA 98
Query: 161 GPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGY 220
G P TY ++ + ++EA VF D + PD+ ++ ++ +Y K+
Sbjct: 99 GILPDEYTYNTLITCCRRGSLYEEAAAVFE---DMKSMGFVPDKVTYNTLLDVYGKSRRI 155
Query: 221 EKARKLFALMAERGVQQSTVTYNSLMSFETN---YKEVSKIYDQMQRAGLQPDVVSYALL 277
++A ++ M G S VTYNSL+S +E ++ +QM G++ DV +Y +
Sbjct: 156 KEAIEVLREMEVNGCSPSIVTYNSLISAYARDGLLEEAMELKNQMVERGIKLDVFTYTAM 215
Query: 278 INAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRC 337
++ + + ++E A+ VFEEM AG +P +N L+ G + VF+ ++ C
Sbjct: 216 LSGFVRTGKDESAMRVFEEMRTAGCKPNICTFNALIKMHGNRGKFAEMMKVFEEIKICCC 275
Query: 338 SPDICSYTTMLSAY-VNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMM 396
PDI ++ T+L+ + N D E F+ +K+ GFVP TY TLI Y++ + ++ M
Sbjct: 276 VPDIVTWNTLLAVFGQNGMDSE-VSGVFKEMKRVGFVPERDTYNTLISAYSRCGSFDQAM 334
Query: 397 EIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILL 453
+Y +M GI P+ + + ++ A + ++ + EM+ P++ LL
Sbjct: 335 AMYKRMLDTGITPDLSTYNAVLAALARGGLWEQSEKILAEMQDGMCKPNELTHCSLL 391
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 102/389 (26%), Positives = 183/389 (47%), Gaps = 7/389 (1%)
Query: 101 MLITAYGKQG-DFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQS 159
+++ YGK G +NK + M G P ++ L+ RG Y+ A A+F M+S
Sbjct: 73 VILNVYGKMGMPWNKITGLFEGMKNAGILPDEYTYNTLITCCRRGSLYEEAAAVFEDMKS 132
Query: 160 SGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGG 219
G P +TY +L ++ ++ + KEA EV L + E + P ++ +I Y + G
Sbjct: 133 MGFVPDKVTYNTLLDVYGKSRRIKEAIEV---LREMEVNGCSPSIVTYNSLISAYARDGL 189
Query: 220 YEKARKLFALMAERGVQQSTVTYNSLMS-FETNYKEVS--KIYDQMQRAGLQPDVVSYAL 276
E+A +L M ERG++ TY +++S F K+ S +++++M+ AG +P++ ++
Sbjct: 190 LEEAMELKNQMVERGIKLDVFTYTAMLSGFVRTGKDESAMRVFEEMRTAGCKPNICTFNA 249
Query: 277 LINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDR 336
LI +G + E + VFEE+ P +N LL F +GM + VFK M+R
Sbjct: 250 LIKMHGNRGKFAEMMKVFEEIKICCCVPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRVG 309
Query: 337 CSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMM 396
P+ +Y T++SAY + A ++R+ G P++ TY ++ A+ E+
Sbjct: 310 FVPERDTYNTLISAYSRCGSFDQAMAMYKRMLDTGITPDLSTYNAVLAALARGGLWEQSE 369
Query: 397 EIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLA 456
+I +M+ KPN+ +++ AY K+ + +E+ S P L+ +
Sbjct: 370 KILAEMQDGMCKPNELTHCSLLHAYANGKEIGRMLALAEEICSGVIEPHAVLLKTLVLVN 429
Query: 457 KTADERNEANELLGNFNHPNNEPGINGLS 485
D EA P ++ L+
Sbjct: 430 SKCDLLLEAERAFLELKRKGFSPDLSTLN 458
Score = 145 bits (366), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 101/390 (25%), Positives = 184/390 (47%), Gaps = 41/390 (10%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
L+ YGK +A +VL M G +PS+V++ +L+ AY R G + A + +M G
Sbjct: 145 LLDVYGKSRRIKEAIEVLREMEVNGCSPSIVTYNSLISAYARDGLLEEAMELKNQMVERG 204
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
+ TY +L FV K + A VF + + KP+ F+ +I M+ G +
Sbjct: 205 IKLDVFTYTAMLSGFVRTGKDESAMRVFEEM---RTAGCKPNICTFNALIKMHGNRGKFA 261
Query: 222 KARKLFALMAERGVQQSTVTYNSLMS-FETNY--KEVSKIYDQMQRAGLQPDVVSYALLI 278
+ K+F + VT+N+L++ F N EVS ++ +M+R G P+ +Y LI
Sbjct: 262 EMMKVFEEIKICCCVPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRVGFVPERDTYNTLI 321
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCS 338
+AY + ++A+A+++ MLD G+ P YN +L A A G+ +Q+ + M+ C
Sbjct: 322 SAYSRCGSFDQAMAMYKRMLDTGITPDLSTYNAVLAALARGGLWEQSEKILAEMQDGMCK 381
Query: 339 PDICSYTTMLSAYVNASD-----------------------------------MEGAEKF 363
P+ ++ ++L AY N + + AE+
Sbjct: 382 PNELTHCSLLHAYANGKEIGRMLALAEEICSGVIEPHAVLLKTLVLVNSKCDLLLEAERA 441
Query: 364 FRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGK 423
F LK+ GF P++ T +I Y + + K EI + M+ +G P+ + ++M + +
Sbjct: 442 FLELKRKGFSPDLSTLNAMIAIYGRRQMVTKTNEILNFMKESGFTPSLATYNSLMYMHSQ 501
Query: 424 NKDFDSAVVWYKEMESCGFPPDQKAKNILL 453
+++F+ + KE+ + G PD + N ++
Sbjct: 502 SENFERSEEVLKEILAKGIKPDIISYNTVI 531
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 97/396 (24%), Positives = 184/396 (46%), Gaps = 15/396 (3%)
Query: 43 SAVAVLRSERTRGQPLPKDLVLGTLVRLKQLK-KWNVVSEVLEWLRIQSWWDFNEMDFLM 101
SA+ V RT G P L+++ + K+ + +V E ++I + + +
Sbjct: 227 SAMRVFEEMRTAGCK-PNICTFNALIKMHGNRGKFAEMMKVFEEIKICCCVP-DIVTWNT 284
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
L+ +G+ G ++ V M + G+ P ++ L+ AY R G + A A+++RM +G
Sbjct: 285 LLAVFGQNGMDSEVSGVFKEMKRVGFVPERDTYNTLISAYSRCGSFDQAMAMYKRMLDTG 344
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
P TY +L ++++E++ + D KP++ +++ Y A G E
Sbjct: 345 ITPDLSTYNAVLAALARGGLWEQSEKILAEMQD---GMCKPNELTHCSLLHAY--ANGKE 399
Query: 222 KARKLFALMAERG---VQQSTVTYNSLMSFETNYK---EVSKIYDQMQRAGLQPDVVSYA 275
R L AL E ++ V +L+ + E + + +++R G PD+ +
Sbjct: 400 IGRML-ALAEEICSGVIEPHAVLLKTLVLVNSKCDLLLEAERAFLELKRKGFSPDLSTLN 458
Query: 276 LLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRD 335
+I YG+ + + + M ++G P+ YN L+ + S +++ V K +
Sbjct: 459 AMIAIYGRRQMVTKTNEILNFMKESGFTPSLATYNSLMYMHSQSENFERSEEVLKEILAK 518
Query: 336 RCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKM 395
PDI SY T++ AY M+ A F +++ G +P+VITY T + YA + E+
Sbjct: 519 GIKPDIISYNTVIFAYCRNGRMKEASHIFSEMRESGLIPDVITYNTFVASYAADSMFEEA 578
Query: 396 MEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAV 431
+++ M +G KPNQ + +++D Y K D A+
Sbjct: 579 IDVVCYMIKHGCKPNQNTYNSVIDGYCKLNRRDDAI 614
Score = 121 bits (304), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 78/382 (20%), Positives = 172/382 (45%), Gaps = 6/382 (1%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N F LI +G +G F + KV + P +V+ L+ +G+ G +F
Sbjct: 243 NICTFNALIKMHGNRGKFAEMMKVFEEIKICCCVPDIVTWNTLLAVFGQNGMDSEVSGVF 302
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
+ M+ G P TY ++ + F +A ++ +LD + + PD ++ ++
Sbjct: 303 KEMKRVGFVPERDTYNTLISAYSRCGSFDQAMAMYKRMLD---TGITPDLSTYNAVLAAL 359
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSKIY---DQMQRAGLQPDV 271
+ G +E++ K+ A M + + + +T+ SL+ N KE+ ++ +++ ++P
Sbjct: 360 ARGGLWEQSEKILAEMQDGMCKPNELTHCSLLHAYANGKEIGRMLALAEEICSGVIEPHA 419
Query: 272 VSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKC 331
V L+ K EA F E+ G P N ++ + MV + +
Sbjct: 420 VLLKTLVLVNSKCDLLLEAERAFLELKRKGFSPDLSTLNAMIAIYGRRQMVTKTNEILNF 479
Query: 332 MRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNN 391
M+ +P + +Y +++ + + + E +E+ + + G P++I+Y T+I Y +
Sbjct: 480 MKESGFTPSLATYNSLMYMHSQSENFERSEEVLKEILAKGIKPDIISYNTVIFAYCRNGR 539
Query: 392 LEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNI 451
+++ I+ +MR +G+ P+ + T + +Y + F+ A+ M G P+Q N
Sbjct: 540 MKEASHIFSEMRESGLIPDVITYNTFVASYAADSMFEEAIDVVCYMIKHGCKPNQNTYNS 599
Query: 452 LLSLAKTADERNEANELLGNFN 473
++ + R++A + + + +
Sbjct: 600 VIDGYCKLNRRDDAIKFISSLH 621
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 79/306 (25%), Positives = 137/306 (44%), Gaps = 41/306 (13%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
LI+AY + G F++A + M G P + ++ A++ A RGG ++ +E I MQ
Sbjct: 320 LISAYSRCGSFDQAMAMYKRMLDTGITPDLSTYNAVLAALARGGLWEQSEKILAEMQDGM 379
Query: 162 PRPSALTY-------------------------------QIILKLFVEANK----FKEAE 186
+P+ LT+ ++LK V N EAE
Sbjct: 380 CKPNELTHCSLLHAYANGKEIGRMLALAEEICSGVIEPHAVLLKTLVLVNSKCDLLLEAE 439
Query: 187 EVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLM 246
F+ L ++ PD + MI +Y + K ++ M E G S TYNSLM
Sbjct: 440 RAFLEL---KRKGFSPDLSTLNAMIAIYGRRQMVTKTNEILNFMKESGFTPSLATYNSLM 496
Query: 247 SFET---NYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVR 303
+ N++ ++ ++ G++PD++SY +I AY + R +EA +F EM ++G+
Sbjct: 497 YMHSQSENFERSEEVLKEILAKGIKPDIISYNTVIFAYCRNGRMKEASHIFSEMRESGLI 556
Query: 304 PTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKF 363
P YN + ++A M ++A V M + C P+ +Y +++ Y + + A KF
Sbjct: 557 PDVITYNTFVASYAADSMFEEAIDVVCYMIKHGCKPNQNTYNSVIDGYCKLNRRDDAIKF 616
Query: 364 FRRLKQ 369
L +
Sbjct: 617 ISSLHE 622
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 88/195 (45%), Gaps = 1/195 (0%)
Query: 275 ALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRR 334
A++IN GK + A ++ + G P AY L+ A +G +A VFK M
Sbjct: 2 AVIINMLGKEGKVSVAASLLNNLHKDGFEPDVYAYTSLITACVSNGRYREAVMVFKKMEE 61
Query: 335 DRCSPDICSYTTMLSAYVNAS-DMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLE 393
+ C P + +Y +L+ Y F +K G +P+ TY TLI + + E
Sbjct: 62 EGCKPTLITYNVILNVYGKMGMPWNKITGLFEGMKNAGILPDEYTYNTLITCCRRGSLYE 121
Query: 394 KMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILL 453
+ +++ M+ G P++ + T++D YGK++ A+ +EME G P N L+
Sbjct: 122 EAAAVFEDMKSMGFVPDKVTYNTLLDVYGKSRRIKEAIEVLREMEVNGCSPSIVTYNSLI 181
Query: 454 SLAKTADERNEANEL 468
S EA EL
Sbjct: 182 SAYARDGLLEEAMEL 196
>gi|144923530|gb|ABE80159.2| Tetratricopeptide-like helical [Medicago truncatula]
Length = 695
Score = 168 bits (426), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 100/401 (24%), Positives = 194/401 (48%), Gaps = 6/401 (1%)
Query: 92 WDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAE 151
+ F++ + LI K G A +L M K P++V ++AL++ + G +A
Sbjct: 156 YLFDQFTYGTLINGLSKNGQIKAALHLLQEMEKSSVQPNLVMYSALIDGLCKDGFVSDAL 215
Query: 152 AIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMI 211
+ ++ G A+TY ++ +++E ++ ++ E + PD F+++I
Sbjct: 216 GLCSQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVREN---VDPDDYTFNILI 272
Query: 212 YMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLM---SFETNYKEVSKIYDQMQRAGLQ 268
K G +A+ + A+M++RG + VTYN+LM N E +++++M + GL+
Sbjct: 273 DALCKEGRILEAQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEARELFNRMVKRGLE 332
Query: 269 PDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTV 328
PDV++Y +LI+ Y K + +EA+ +F+E+ + + PT +YN L+D SG + + +
Sbjct: 333 PDVLNYNVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRISHVKKL 392
Query: 329 FKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAK 388
M PD+ +Y ++ A + A + + G PN++TY ++ GY
Sbjct: 393 LDEMHGSAQPPDVVTYNILIDALCKEGRILEALGVLVMMMKKGVKPNIVTYNAMMDGYCL 452
Query: 389 VNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKA 448
NN+ +I+++M +G++P+ + +++ Y K + D A+V +KEM PD +
Sbjct: 453 RNNVNVAKDIFNRMVKSGLEPDILNYNVLINGYCKTEMVDEAIVLFKEMRHKNLIPDIAS 512
Query: 449 KNILLSLAKTADERNEANELLGNFNHPNNEPGINGLSISVD 489
N L+ ELL P + +I +D
Sbjct: 513 YNSLIDGLCNLGRIPHVQELLDEMCDSGQSPDVITYNILLD 553
Score = 162 bits (411), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 106/429 (24%), Positives = 198/429 (46%), Gaps = 37/429 (8%)
Query: 75 KWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSH 134
+W V+++L + ++ D ++ F +LI A K+G +A+ VL+ M+K+G P +V++
Sbjct: 245 RWQEVTQLLTKM-VRENVDPDDYTFNILIDALCKEGRILEAQGVLAMMSKRGEKPDIVTY 303
Query: 135 TALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLD 194
ALME Y A +F RM G P L Y +++ + + EA +F L +
Sbjct: 304 NALMEGYCSRENVHEARELFNRMVKRGLEPDVLNYNVLIDGYCKTKMVDEAMVLFKELCN 363
Query: 195 EEKSPL--------------------------------KPDQKMFHMMIYMYKKAGGYEK 222
+ P PD ++++I K G +
Sbjct: 364 KNLVPTIASYNSLIDGLCNSGRISHVKKLLDEMHGSAQPPDVVTYNILIDALCKEGRILE 423
Query: 223 ARKLFALMAERGVQQSTVTYNSLM---SFETNYKEVSKIYDQMQRAGLQPDVVSYALLIN 279
A + +M ++GV+ + VTYN++M N I+++M ++GL+PD+++Y +LIN
Sbjct: 424 ALGVLVMMMKKGVKPNIVTYNAMMDGYCLRNNVNVAKDIFNRMVKSGLEPDILNYNVLIN 483
Query: 280 AYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSP 339
Y K +EA+ +F+EM + P +YN L+D G + + + M SP
Sbjct: 484 GYCKTEMVDEAIVLFKEMRHKNLIPDIASYNSLIDGLCNLGRIPHVQELLDEMCDSGQSP 543
Query: 340 DICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIY 399
D+ +Y +L A+ + A FR++ + G P+ T ++ K L+ +
Sbjct: 544 DVITYNILLDAFCKTQPFDKAISLFRQIVE-GIWPDFYTNHAIVDNLCKGEKLKMAEDAL 602
Query: 400 DKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTA 459
+ ++G PN +T +++A K+ F A++ +ME PPD I++ +
Sbjct: 603 KHLLMHGCSPNVQTYTILINALCKDGSFGEAMLLLSKMEDNDRPPDAITFEIIIGVLLQR 662
Query: 460 DERNEANEL 468
+E ++A +L
Sbjct: 663 NETDKAEKL 671
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 90/347 (25%), Positives = 173/347 (49%), Gaps = 7/347 (2%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
LI G + + ++L+ M ++ P + L++A + GR A+ + M G
Sbjct: 236 LIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNILIDALCKEGRILEAQGVLAMMSKRG 295
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
+P +TY +++ + EA E+F ++ K L+PD ++++I Y K +
Sbjct: 296 EKPDIVTYNALMEGYCSRENVHEARELFNRMV---KRGLEPDVLNYNVLIDGYCKTKMVD 352
Query: 222 KARKLFALMAERGVQQSTVTYNSLMSFETNYKEVS---KIYDQMQRAGLQPDVVSYALLI 278
+A LF + + + + +YNSL+ N +S K+ D+M + PDVV+Y +LI
Sbjct: 353 EAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRISHVKKLLDEMHGSAQPPDVVTYNILI 412
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCS 338
+A K R EAL V M+ GV+P YN ++D + + V+ A+ +F M +
Sbjct: 413 DALCKEGRILEALGVLVMMMKKGVKPNIVTYNAMMDGYCLRNNVNVAKDIFNRMVKSGLE 472
Query: 339 PDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEI 398
PDI +Y +++ Y ++ A F+ ++ +P++ +Y +LI G + + + E+
Sbjct: 473 PDILNYNVLINGYCKTEMVDEAIVLFKEMRHKNLIPDIASYNSLIDGLCNLGRIPHVQEL 532
Query: 399 YDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPD 445
D+M +G P+ + ++DA+ K + FD A+ ++++ G PD
Sbjct: 533 LDEMCDSGQSPDVITYNILLDAFCKTQPFDKAISLFRQIVE-GIWPD 578
Score = 128 bits (322), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 103/458 (22%), Positives = 180/458 (39%), Gaps = 70/458 (15%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
L+ A + G + A + + + KG +PS+ + T L+ Y A ++ + SG
Sbjct: 61 LLGAIVRMGHYPTAISLFTQLQSKGISPSIATFTILINCYFHQSHTAFAFSLLATILKSG 120
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDE-------------------------- 195
+P+ +T+ I+ F +A + LL +
Sbjct: 121 YQPNLVTFNTIINGFCINGMIFKALDFCQNLLAQGYLFDQFTYGTLINGLSKNGQIKAAL 180
Query: 196 ------EKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFE 249
EKS ++P+ M+ +I K G A L + + ERG+ VTYNSL+
Sbjct: 181 HLLQEMEKSSVQPNLVMYSALIDGLCKDGFVSDALGLCSQIGERGILLDAVTYNSLIDGC 240
Query: 250 TN---YKEVSKIYDQMQRA-----------------------------------GLQPDV 271
+ ++EV+++ +M R G +PD+
Sbjct: 241 CSVGRWQEVTQLLTKMVRENVDPDDYTFNILIDALCKEGRILEAQGVLAMMSKRGEKPDI 300
Query: 272 VSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKC 331
V+Y L+ Y EA +F M+ G+ P YN+L+D + + MVD+A +FK
Sbjct: 301 VTYNALMEGYCSRENVHEARELFNRMVKRGLEPDVLNYNVLIDGYCKTKMVDEAMVLFKE 360
Query: 332 MRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNN 391
+ P I SY +++ N+ + +K + P+V+TY LI K
Sbjct: 361 LCNKNLVPTIASYNSLIDGLCNSGRISHVKKLLDEMHGSAQPPDVVTYNILIDALCKEGR 420
Query: 392 LEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNI 451
+ + + + M G+KPN + +MD Y + + A + M G PD N+
Sbjct: 421 ILEALGVLVMMMKKGVKPNIVTYNAMMDGYCLRNNVNVAKDIFNRMVKSGLEPDILNYNV 480
Query: 452 LLSLAKTADERNEANELLGNFNHPNNEPGINGLSISVD 489
L++ + +EA L H N P I + +D
Sbjct: 481 LINGYCKTEMVDEAIVLFKEMRHKNLIPDIASYNSLID 518
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 68/309 (22%), Positives = 135/309 (43%), Gaps = 40/309 (12%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
LI G + +K+L M+ P VV++ L++A + GR A + M G
Sbjct: 376 LIDGLCNSGRISHVKKLLDEMHGSAQPPDVVTYNILIDALCKEGRILEALGVLVMMMKKG 435
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
+P+ +TY ++ + N A+++F ++ KS L+PD ++++I Y K +
Sbjct: 436 VKPNIVTYNAMMDGYCLRNNVNVAKDIFNRMV---KSGLEPDILNYNVLINGYCKTEMVD 492
Query: 222 KARKLFALMAERGVQQSTVTYNSLMSFETNY---KEVSKIYDQMQRAGLQPDVVSYALLI 278
+A LF M + + +YNSL+ N V ++ D+M +G PDV++Y +L+
Sbjct: 493 EAIVLFKEMRHKNLIPDIASYNSLIDGLCNLGRIPHVQELLDEMCDSGQSPDVITYNILL 552
Query: 279 NAYGKARREEEALAVFEEMLDA----------------------------------GVRP 304
+A+ K + ++A+++F ++++ G P
Sbjct: 553 DAFCKTQPFDKAISLFRQIVEGIWPDFYTNHAIVDNLCKGEKLKMAEDALKHLLMHGCSP 612
Query: 305 THKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFF 364
+ Y IL++A G +A + M + PD ++ ++ + ++ + AEK
Sbjct: 613 NVQTYTILINALCKDGSFGEAMLLLSKMEDNDRPPDAITFEIIIGVLLQRNETDKAEKLR 672
Query: 365 RRLKQDGFV 373
+ G V
Sbjct: 673 EEMIARGLV 681
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 70/361 (19%), Positives = 140/361 (38%), Gaps = 73/361 (20%)
Query: 202 PDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMS--FETNYKEVS-KI 258
P +F ++ + G Y A LF + +G+ S T+ L++ F ++ + +
Sbjct: 53 PPTSVFDKLLGAIVRMGHYPTAISLFTQLQSKGISPSIATFTILINCYFHQSHTAFAFSL 112
Query: 259 YDQMQRAGLQPDVV-----------------------------------SYALLINAYGK 283
+ ++G QP++V +Y LIN K
Sbjct: 113 LATILKSGYQPNLVTFNTIINGFCINGMIFKALDFCQNLLAQGYLFDQFTYGTLINGLSK 172
Query: 284 ARREEEALAVFEEMLDAGVRPTHKAYN--------------------------ILLDAFA 317
+ + AL + +EM + V+P Y+ ILLDA
Sbjct: 173 NGQIKAALHLLQEMEKSSVQPNLVMYSALIDGLCKDGFVSDALGLCSQIGERGILLDAVT 232
Query: 318 ISGMVDQARTV---------FKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLK 368
+ ++D +V M R+ PD ++ ++ A + A+ +
Sbjct: 233 YNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNILIDALCKEGRILEAQGVLAMMS 292
Query: 369 QDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFD 428
+ G P+++TY L++GY N+ + E++++M G++P+ + ++D Y K K D
Sbjct: 293 KRGEKPDIVTYNALMEGYCSRENVHEARELFNRMVKRGLEPDVLNYNVLIDGYCKTKMVD 352
Query: 429 SAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGINGLSISV 488
A+V +KE+ + P + N L+ + + +LL + P + +I +
Sbjct: 353 EAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRISHVKKLLDEMHGSAQPPDVVTYNILI 412
Query: 489 D 489
D
Sbjct: 413 D 413
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 36/163 (22%), Positives = 74/163 (45%)
Query: 283 KARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDIC 342
+ R ++A+ F M+ P ++ LL A G A ++F ++ SP I
Sbjct: 32 RFRNVDDAVTCFNRMVRVFPPPPTSVFDKLLGAIVRMGHYPTAISLFTQLQSKGISPSIA 91
Query: 343 SYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKM 402
++T +++ Y + S A + + G+ PN++T+ T+I G+ + K ++ +
Sbjct: 92 TFTILINCYFHQSHTAFAFSLLATILKSGYQPNLVTFNTIINGFCINGMIFKALDFCQNL 151
Query: 403 RVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPD 445
G +Q + T+++ KN +A+ +EME P+
Sbjct: 152 LAQGYLFDQFTYGTLINGLSKNGQIKAALHLLQEMEKSSVQPN 194
>gi|302791141|ref|XP_002977337.1| hypothetical protein SELMODRAFT_107186 [Selaginella moellendorffii]
gi|300154707|gb|EFJ21341.1| hypothetical protein SELMODRAFT_107186 [Selaginella moellendorffii]
Length = 636
Score = 168 bits (426), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 99/356 (27%), Positives = 175/356 (49%), Gaps = 8/356 (2%)
Query: 130 SVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVF 189
+V++ T +++ + R A F +M+ G P+ TY +++ F + +K A +
Sbjct: 6 NVITWTIMIDGLCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRA---Y 62
Query: 190 MTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFE 249
+ L + ++S L P+ + +I+ + + + A KLF M E G + VTYN+L+S
Sbjct: 63 LLLKEMKESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGL 122
Query: 250 TN---YKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTH 306
E ++ D+M+ GLQPD SY L+ K + + AL VFE+ + P
Sbjct: 123 CRNGLMDEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDV 182
Query: 307 KAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRR 366
AY+ L+ +G +D+A +F+ MR + C PD+ ++T ++ ++ A++
Sbjct: 183 VAYSTLIAGLCKTGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLET 242
Query: 367 LKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKD 426
++ PNVITY +LI G K + E++ +M V GI+PN + +++ +
Sbjct: 243 MEDRNCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNG 302
Query: 427 FDSAVVWYKEMESCGFPPDQKAKNILL-SLAKTADERNEANELLGNFNHPNNEPGI 481
DSA++ +EM + G PD N L+ L KT EAN L G+ P +
Sbjct: 303 VDSALLLMEEMTATGCLPDIITYNTLIDGLCKTG-RAPEANRLFGDMKAKFCNPDV 357
Score = 155 bits (391), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 82/332 (24%), Positives = 163/332 (49%), Gaps = 6/332 (1%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
LI K G ++A K+ M + P VV+ TALM+ +G R + A+ + M+
Sbjct: 188 LIAGLCKTGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETMEDRN 247
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
P+ +TY ++ + + ++A+EVF ++ ++P+ ++ +I+ + G +
Sbjct: 248 CTPNVITYSSLIDGLCKTGQVRDAQEVFKRMI---VRGIEPNVVTYNSLIHGFCMTNGVD 304
Query: 222 KARKLFALMAERGVQQSTVTYNSL---MSFETNYKEVSKIYDQMQRAGLQPDVVSYALLI 278
A L M G +TYN+L + E ++++ M+ PDV++Y+ LI
Sbjct: 305 SALLLMEEMTATGCLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSCLI 364
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCS 338
+ K R + A +F++ML V P ++ L++ + +G+VD A + + M CS
Sbjct: 365 GGFCKLERIDMARTLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEEMVASDCS 424
Query: 339 PDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEI 398
PD+ +YT+++ + M A + +R+ + G PNV+TY LI + + ++
Sbjct: 425 PDVYTYTSLVDGFCKVGRMVEARRVLKRMAKRGCQPNVVTYTALIDAFCRAGKPTVAYKL 484
Query: 399 YDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSA 430
++M NG++PN + +++ + D + A
Sbjct: 485 LEEMVGNGVQPNVITYRSLIGGFCGTGDLEEA 516
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 88/347 (25%), Positives = 162/347 (46%), Gaps = 6/347 (1%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
L+ K G + A KV + P VV+++ L+ + GR A +F +M+ +
Sbjct: 153 LMAGLCKTGKIDMALKVFEDNSNGDCPPDVVAYSTLIAGLCKTGRLDEACKLFEKMRENS 212
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
P +T+ ++ + ++ +EA++V T+ D +P + + +I K G
Sbjct: 213 CEPDVVTFTALMDGLCKGDRLQEAQQVLETMEDRNCTP---NVITYSSLIDGLCKTGQVR 269
Query: 222 KARKLFALMAERGVQQSTVTYNSLM---SFETNYKEVSKIYDQMQRAGLQPDVVSYALLI 278
A+++F M RG++ + VTYNSL+ + ++M G PD+++Y LI
Sbjct: 270 DAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDSALLLMEEMTATGCLPDIITYNTLI 329
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCS 338
+ K R EA +F +M P Y+ L+ F +D ART+F M +
Sbjct: 330 DGLCKTGRAPEANRLFGDMKAKFCNPDVITYSCLIGGFCKLERIDMARTLFDDMLKQAVL 389
Query: 339 PDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEI 398
PD+ +++T++ Y NA ++ AE+ + P+V TY +L+ G+ KV + + +
Sbjct: 390 PDVVTFSTLVEGYCNAGLVDDAERLLEEMVASDCSPDVYTYTSLVDGFCKVGRMVEARRV 449
Query: 399 YDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPD 445
+M G +PN +T ++DA+ + A +EM G P+
Sbjct: 450 LKRMAKRGCQPNVVTYTALIDAFCRAGKPTVAYKLLEEMVGNGVQPN 496
Score = 139 bits (349), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 97/399 (24%), Positives = 180/399 (45%), Gaps = 8/399 (2%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
NE + +LI + K ++A +L M + G AP+VV+++ ++ + R + A +F
Sbjct: 41 NEWTYNVLINGFCKVHKVHRAYLLLKEMKESGLAPNVVTYSTVIHGFCRQTKVDTAYKLF 100
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKS-PLKPDQKMFHMMIYM 213
R+M +G P+ +TY +L EA E LLDE + L+PD+ + ++
Sbjct: 101 RQMVENGCMPNLVTYNTLLSGLCRNGLMDEAYE----LLDEMRERGLQPDKFSYDTLMAG 156
Query: 214 YKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETN---YKEVSKIYDQMQRAGLQPD 270
K G + A K+F + V Y++L++ E K++++M+ +PD
Sbjct: 157 LCKTGKIDMALKVFEDNSNGDCPPDVVAYSTLIAGLCKTGRLDEACKLFEKMRENSCEPD 216
Query: 271 VVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFK 330
VV++ L++ K R +EA V E M D P Y+ L+D +G V A+ VFK
Sbjct: 217 VVTFTALMDGLCKGDRLQEAQQVLETMEDRNCTPNVITYSSLIDGLCKTGQVRDAQEVFK 276
Query: 331 CMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVN 390
M P++ +Y +++ + + ++ A + G +P++ITY TLI G K
Sbjct: 277 RMIVRGIEPNVVTYNSLIHGFCMTNGVDSALLLMEEMTATGCLPDIITYNTLIDGLCKTG 336
Query: 391 NLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKN 450
+ ++ M+ P+ ++ ++ + K + D A + +M PD +
Sbjct: 337 RAPEANRLFGDMKAKFCNPDVITYSCLIGGFCKLERIDMARTLFDDMLKQAVLPDVVTFS 396
Query: 451 ILLSLAKTADERNEANELLGNFNHPNNEPGINGLSISVD 489
L+ A ++A LL + P + + VD
Sbjct: 397 TLVEGYCNAGLVDDAERLLEEMVASDCSPDVYTYTSLVD 435
Score = 125 bits (313), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 82/329 (24%), Positives = 148/329 (44%), Gaps = 8/329 (2%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + + LI + + A ++ M G P ++++ L++ + GR A +F
Sbjct: 286 NVVTYNSLIHGFCMTNGVDSALLLMEEMTATGCLPDIITYNTLIDGLCKTGRAPEANRLF 345
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
M++ P +TY ++ F + + A +F +L K + PD F ++ Y
Sbjct: 346 GDMKAKFCNPDVITYSCLIGGFCKLERIDMARTLFDDML---KQAVLPDVVTFSTLVEGY 402
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYK---EVSKIYDQMQRAGLQPDV 271
AG + A +L M TY SL+ E ++ +M + G QP+V
Sbjct: 403 CNAGLVDDAERLLEEMVASDCSPDVYTYTSLVDGFCKVGRMVEARRVLKRMAKRGCQPNV 462
Query: 272 VSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKC 331
V+Y LI+A+ +A + A + EEM+ GV+P Y L+ F +G +++AR + +
Sbjct: 463 VTYTALIDAFCRAGKPTVAYKLLEEMVGNGVQPNVITYRSLIGGFCGTGDLEEARKMLER 522
Query: 332 MRRDR-CSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVN 390
+ RD C D+ +Y M+ M A + +KQ G P Y LI+G +
Sbjct: 523 LERDENCKADMFAYRVMMDGLCRTGRMSAALELLEAIKQSGTPPRHDIYVALIRGLCQGK 582
Query: 391 NLEKMMEIYDKMRVN-GIKPNQTIFTTIM 418
L K ME+ ++M ++ +PN + ++
Sbjct: 583 ELGKAMEVLEEMTLSRKSRPNAEAYEAVI 611
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 119/223 (53%), Gaps = 2/223 (0%)
Query: 268 QPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQART 327
+ +V+++ ++I+ KA R EA F +M G P YN+L++ F V +A
Sbjct: 4 EKNVITWTIMIDGLCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRAYL 63
Query: 328 VFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYA 387
+ K M+ +P++ +Y+T++ + + ++ A K FR++ ++G +PN++TY TL+ G
Sbjct: 64 LLKEMKESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGLC 123
Query: 388 KVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQK 447
+ +++ E+ D+MR G++P++ + T+M K D A+ +++ + PPD
Sbjct: 124 RNGLMDEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVV 183
Query: 448 AKNILLS-LAKTADERNEANELLGNFNHPNNEPGINGLSISVD 489
A + L++ L KT +EA +L + EP + + +D
Sbjct: 184 AYSTLIAGLCKTG-RLDEACKLFEKMRENSCEPDVVTFTALMD 225
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 53/236 (22%), Positives = 106/236 (44%)
Query: 254 EVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILL 313
E + + +M++ G P+ +Y +LIN + K + A + +EM ++G+ P Y+ ++
Sbjct: 25 EATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRAYLLLKEMKESGLAPNVVTYSTVI 84
Query: 314 DAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFV 373
F VD A +F+ M + C P++ +Y T+LS M+ A + +++ G
Sbjct: 85 HGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGLCRNGLMDEAYELLDEMRERGLQ 144
Query: 374 PNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVW 433
P+ +Y TL+ G K ++ +++++ P+ ++T++ K D A
Sbjct: 145 PDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVVAYSTLIAGLCKTGRLDEACKL 204
Query: 434 YKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGINGLSISVD 489
+++M PD L+ D EA ++L N P + S +D
Sbjct: 205 FEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETMEDRNCTPNVITYSSLID 260
Score = 75.1 bits (183), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 97/201 (48%), Gaps = 6/201 (2%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
L+ + K G +A +VL M K+G P+VV++TAL++A+ R G+ A + M +G
Sbjct: 433 LVDGFCKVGRMVEARRVLKRMAKRGCQPNVVTYTALIDAFCRAGKPTVAYKLLEEMVGNG 492
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
+P+ +TY+ ++ F +EA ++ L +E K D + +M+ + G
Sbjct: 493 VQPNVITYRSLIGGFCGTGDLEEARKMLERLERDENC--KADMFAYRVMMDGLCRTGRMS 550
Query: 222 KARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSKIYDQMQRAGL----QPDVVSYALL 277
A +L + + G Y +L+ KE+ K + ++ L +P+ +Y +
Sbjct: 551 AALELLEAIKQSGTPPRHDIYVALIRGLCQGKELGKAMEVLEEMTLSRKSRPNAEAYEAV 610
Query: 278 INAYGKARREEEALAVFEEML 298
I + R EEA A+ +E+L
Sbjct: 611 IQELAREGRHEEANALADELL 631
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 71/143 (49%)
Query: 337 CSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMM 396
C ++ ++T M+ A+ + A +F ++K+ G VPN TY LI G+ KV+ + +
Sbjct: 3 CEKNVITWTIMIDGLCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRAY 62
Query: 397 EIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLA 456
+ +M+ +G+ PN ++T++ + + D+A +++M G P+ N LLS
Sbjct: 63 LLLKEMKESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGL 122
Query: 457 KTADERNEANELLGNFNHPNNEP 479
+EA ELL +P
Sbjct: 123 CRNGLMDEAYELLDEMRERGLQP 145
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/233 (24%), Positives = 106/233 (45%), Gaps = 10/233 (4%)
Query: 99 FLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQ 158
F L+ Y G + AE++L M +P V ++T+L++ + + GR A + +RM
Sbjct: 395 FSTLVEGYCNAGLVDDAERLLEEMVASDCSPDVYTYTSLVDGFCKVGRMVEARRVLKRMA 454
Query: 159 SSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDE-EKSPLKPDQKMFHMMIYMYKKA 217
G +P+ +TY ++ F A K V LL+E + ++P+ + +I +
Sbjct: 455 KRGCQPNVVTYTALIDAFCRAGK----PTVAYKLLEEMVGNGVQPNVITYRSLIGGFCGT 510
Query: 218 GGYEKARKLFA-LMAERGVQQSTVTYNSLMSFETNYKEVS---KIYDQMQRAGLQPDVVS 273
G E+ARK+ L + + Y +M +S ++ + ++++G P
Sbjct: 511 GDLEEARKMLERLERDENCKADMFAYRVMMDGLCRTGRMSAALELLEAIKQSGTPPRHDI 570
Query: 274 YALLINAYGKARREEEALAVFEEM-LDAGVRPTHKAYNILLDAFAISGMVDQA 325
Y LI + + +A+ V EEM L RP +AY ++ A G ++A
Sbjct: 571 YVALIRGLCQGKELGKAMEVLEEMTLSRKSRPNAEAYEAVIQELAREGRHEEA 623
>gi|224056220|ref|XP_002298762.1| predicted protein [Populus trichocarpa]
gi|222846020|gb|EEE83567.1| predicted protein [Populus trichocarpa]
Length = 643
Score = 168 bits (426), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 106/409 (25%), Positives = 196/409 (47%), Gaps = 7/409 (1%)
Query: 76 WNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHT 135
WN + + E ++ +E + LIT + +A V M G+ P V++
Sbjct: 85 WNKIKGLFEGMKNAGVLP-DEYTYNTLITCCRRGSLHEEAAAVFKDMKSMGFVPDKVTYN 143
Query: 136 ALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDE 195
AL++ YG+ R K A + R M+ +G PS +TY ++ + KEA E+ +++
Sbjct: 144 ALLDVYGKSRRTKEAMEVLREMEVNGCSPSIVTYNSLISAYARDGLLKEAMELKNQMVE- 202
Query: 196 EKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETN---Y 252
+ D + ++ + +AG E A ++FA M G + + T+N+L+ N +
Sbjct: 203 --GGINLDVFTYTTLLSGFVRAGKDESAMRVFAEMRAAGCKPNICTFNALIKMHGNRGKF 260
Query: 253 KEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNIL 312
E+ K++++++ + PD+V++ L+ +G+ + E VF+EM AG P YN L
Sbjct: 261 AEMMKVFEEIKNSCCVPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERDTYNTL 320
Query: 313 LDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGF 372
+ A++ G DQA ++K M +PD+ +Y +L+A E +EK F +K
Sbjct: 321 ISAYSRCGSFDQAMDIYKRMLEAGITPDLSTYNAVLAALARGGLWEQSEKIFAEMKDGRC 380
Query: 373 VPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVV 432
PN +TY +L+ YA + +M+ + +++ I+P+ + T++ K A V
Sbjct: 381 KPNELTYCSLLHAYANGKEIGRMLALAEEICSGVIEPHAVLLKTLVLVNSKCDLLVEAEV 440
Query: 433 WYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGI 481
+ E++ GF PD N +LS+ + NE+L N P +
Sbjct: 441 AFLELKRKGFSPDLSTLNAMLSIYGRRQMFTKTNEILNFMNESGFTPSL 489
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 98/365 (26%), Positives = 184/365 (50%), Gaps = 14/365 (3%)
Query: 101 MLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSS 160
++I+ GK+G + A +L+ ++K G+ V ++T+L+ A GRY+ A +F++M+
Sbjct: 3 VIISMLGKEGKVSVAASLLNDLHKDGFGLDVYAYTSLITACVSNGRYREAVMVFKKMEEE 62
Query: 161 GPRPSALTYQIILKLF----VEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKK 216
G +P+ +TY +IL ++ + NK K E + + + PD+ ++ +I ++
Sbjct: 63 GCKPTLITYNVILNVYGKMGMPWNKIKGLFE------GMKNAGVLPDEYTYNTLITCCRR 116
Query: 217 AGGYEKARKLFALMAERGVQQSTVTYNSLMSF---ETNYKEVSKIYDQMQRAGLQPDVVS 273
+E+A +F M G VTYN+L+ KE ++ +M+ G P +V+
Sbjct: 117 GSLHEEAAAVFKDMKSMGFVPDKVTYNALLDVYGKSRRTKEAMEVLREMEVNGCSPSIVT 176
Query: 274 YALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMR 333
Y LI+AY + +EA+ + +M++ G+ Y LL F +G + A VF MR
Sbjct: 177 YNSLISAYARDGLLKEAMELKNQMVEGGINLDVFTYTTLLSGFVRAGKDESAMRVFAEMR 236
Query: 334 RDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLE 393
C P+IC++ ++ + N K F +K VP+++T+ TL+ + +
Sbjct: 237 AAGCKPNICTFNALIKMHGNRGKFAEMMKVFEEIKNSCCVPDIVTWNTLLAVFGQNGMDS 296
Query: 394 KMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKN-IL 452
++ ++ +M+ G P + + T++ AY + FD A+ YK M G PD N +L
Sbjct: 297 EVSGVFKEMKRAGFVPERDTYNTLISAYSRCGSFDQAMDIYKRMLEAGITPDLSTYNAVL 356
Query: 453 LSLAK 457
+LA+
Sbjct: 357 AALAR 361
Score = 155 bits (391), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 105/390 (26%), Positives = 184/390 (47%), Gaps = 41/390 (10%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
L+ YGK +A +VL M G +PS+V++ +L+ AY R G K A + +M G
Sbjct: 145 LLDVYGKSRRTKEAMEVLREMEVNGCSPSIVTYNSLISAYARDGLLKEAMELKNQMVEGG 204
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
TY +L FV A K + A VF + + KP+ F+ +I M+ G +
Sbjct: 205 INLDVFTYTTLLSGFVRAGKDESAMRVFAEM---RAAGCKPNICTFNALIKMHGNRGKFA 261
Query: 222 KARKLFALMAERGVQQSTVTYNSLMS-FETNY--KEVSKIYDQMQRAGLQPDVVSYALLI 278
+ K+F + VT+N+L++ F N EVS ++ +M+RAG P+ +Y LI
Sbjct: 262 EMMKVFEEIKNSCCVPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERDTYNTLI 321
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCS 338
+AY + ++A+ +++ ML+AG+ P YN +L A A G+ +Q+ +F M+ RC
Sbjct: 322 SAYSRCGSFDQAMDIYKRMLEAGITPDLSTYNAVLAALARGGLWEQSEKIFAEMKDGRCK 381
Query: 339 PDICSYTTMLSAYVNASD-----------------------------------MEGAEKF 363
P+ +Y ++L AY N + + AE
Sbjct: 382 PNELTYCSLLHAYANGKEIGRMLALAEEICSGVIEPHAVLLKTLVLVNSKCDLLVEAEVA 441
Query: 364 FRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGK 423
F LK+ GF P++ T ++ Y + K EI + M +G P+ + ++M + +
Sbjct: 442 FLELKRKGFSPDLSTLNAMLSIYGRRQMFTKTNEILNFMNESGFTPSLATYNSLMYMHSR 501
Query: 424 NKDFDSAVVWYKEMESCGFPPDQKAKNILL 453
+++F+ + KE+ + G PD + N ++
Sbjct: 502 SENFERSEEVLKEILAKGIKPDTISYNTVI 531
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 97/357 (27%), Positives = 179/357 (50%), Gaps = 9/357 (2%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGR-YKNAEAIFRRMQSS 160
LITA G + +A V M ++G P+++++ ++ YG+ G + + +F M+++
Sbjct: 39 LITACVSNGRYREAVMVFKKMEEEGCKPTLITYNVILNVYGKMGMPWNKIKGLFEGMKNA 98
Query: 161 GPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGY 220
G P TY ++ + +EA VF D + PD+ ++ ++ +Y K+
Sbjct: 99 GVLPDEYTYNTLITCCRRGSLHEEAAAVFK---DMKSMGFVPDKVTYNALLDVYGKSRRT 155
Query: 221 EKARKLFALMAERGVQQSTVTYNSLMSFETN---YKEVSKIYDQMQRAGLQPDVVSYALL 277
++A ++ M G S VTYNSL+S KE ++ +QM G+ DV +Y L
Sbjct: 156 KEAMEVLREMEVNGCSPSIVTYNSLISAYARDGLLKEAMELKNQMVEGGINLDVFTYTTL 215
Query: 278 INAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRC 337
++ + +A ++E A+ VF EM AG +P +N L+ G + VF+ ++ C
Sbjct: 216 LSGFVRAGKDESAMRVFAEMRAAGCKPNICTFNALIKMHGNRGKFAEMMKVFEEIKNSCC 275
Query: 338 SPDICSYTTMLSAY-VNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMM 396
PDI ++ T+L+ + N D E F+ +K+ GFVP TY TLI Y++ + ++ M
Sbjct: 276 VPDIVTWNTLLAVFGQNGMDSE-VSGVFKEMKRAGFVPERDTYNTLISAYSRCGSFDQAM 334
Query: 397 EIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILL 453
+IY +M GI P+ + + ++ A + ++ + + EM+ P++ LL
Sbjct: 335 DIYKRMLEAGITPDLSTYNAVLAALARGGLWEQSEKIFAEMKDGRCKPNELTYCSLL 391
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 85/382 (22%), Positives = 171/382 (44%), Gaps = 41/382 (10%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N F LI +G +G F + KV + P +V+ L+ +G+ G +F
Sbjct: 243 NICTFNALIKMHGNRGKFAEMMKVFEEIKNSCCVPDIVTWNTLLAVFGQNGMDSEVSGVF 302
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
+ M+ +G P TY ++ + F +A +++ +L+ + + PD ++ ++
Sbjct: 303 KEMKRAGFVPERDTYNTLISAYSRCGSFDQAMDIYKRMLE---AGITPDLSTYNAVLAAL 359
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSKI---------------- 258
+ G +E++ K+FA M + + + +TY SL+ N KE+ ++
Sbjct: 360 ARGGLWEQSEKIFAEMKDGRCKPNELTYCSLLHAYANGKEIGRMLALAEEICSGVIEPHA 419
Query: 259 ----------------------YDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEE 296
+ +++R G PD+ + +++ YG+ + + +
Sbjct: 420 VLLKTLVLVNSKCDLLVEAEVAFLELKRKGFSPDLSTLNAMLSIYGRRQMFTKTNEILNF 479
Query: 297 MLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASD 356
M ++G P+ YN L+ + S +++ V K + PD SY T++ AY
Sbjct: 480 MNESGFTPSLATYNSLMYMHSRSENFERSEEVLKEILAKGIKPDTISYNTVIFAYCRNGR 539
Query: 357 MEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTT 416
M+ A + F +++ G VP+VITY T + YA + E +++ M +G KPNQ + +
Sbjct: 540 MKEASRIFSEMRESGLVPDVITYNTFVASYAADSMFEDAIDVVRYMIKHGCKPNQNTYNS 599
Query: 417 IMDAYGKNKDFDSAVVWYKEME 438
++D Y K+ D A+++ +
Sbjct: 600 VVDGYCKHNHRDDAIMFISSLH 621
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 79/370 (21%), Positives = 174/370 (47%), Gaps = 6/370 (1%)
Query: 88 IQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRY 147
++ + + + L++ + + G A +V + M G P++ + AL++ +G G++
Sbjct: 201 VEGGINLDVFTYTTLLSGFVRAGKDESAMRVFAEMRAAGCKPNICTFNALIKMHGNRGKF 260
Query: 148 KNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMF 207
+F +++S P +T+ +L +F + E VF + +++ P++ +
Sbjct: 261 AEMMKVFEEIKNSCCVPDIVTWNTLLAVFGQNGMDSEVSGVFKEM---KRAGFVPERDTY 317
Query: 208 HMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETN---YKEVSKIYDQMQR 264
+ +I Y + G +++A ++ M E G+ TYN++++ +++ KI+ +M+
Sbjct: 318 NTLISAYSRCGSFDQAMDIYKRMLEAGITPDLSTYNAVLAALARGGLWEQSEKIFAEMKD 377
Query: 265 AGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQ 324
+P+ ++Y L++AY + LA+ EE+ + P L+ + ++ +
Sbjct: 378 GRCKPNELTYCSLLHAYANGKEIGRMLALAEEICSGVIEPHAVLLKTLVLVNSKCDLLVE 437
Query: 325 ARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIK 384
A F ++R SPD+ + MLS Y + + + GF P++ TY +L+
Sbjct: 438 AEVAFLELKRKGFSPDLSTLNAMLSIYGRRQMFTKTNEILNFMNESGFTPSLATYNSLMY 497
Query: 385 GYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPP 444
+++ N E+ E+ ++ GIKP+ + T++ AY +N A + EM G P
Sbjct: 498 MHSRSENFERSEEVLKEILAKGIKPDTISYNTVIFAYCRNGRMKEASRIFSEMRESGLVP 557
Query: 445 DQKAKNILLS 454
D N ++
Sbjct: 558 DVITYNTFVA 567
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 78/306 (25%), Positives = 138/306 (45%), Gaps = 41/306 (13%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
LI+AY + G F++A + M + G P + ++ A++ A RGG ++ +E IF M+
Sbjct: 320 LISAYSRCGSFDQAMDIYKRMLEAGITPDLSTYNAVLAALARGGLWEQSEKIFAEMKDGR 379
Query: 162 PRPSALTY-------------------------------QIILKLFVEANK----FKEAE 186
+P+ LTY ++LK V N EAE
Sbjct: 380 CKPNELTYCSLLHAYANGKEIGRMLALAEEICSGVIEPHAVLLKTLVLVNSKCDLLVEAE 439
Query: 187 EVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLM 246
F+ L ++ PD + M+ +Y + + K ++ M E G S TYNSLM
Sbjct: 440 VAFLEL---KRKGFSPDLSTLNAMLSIYGRRQMFTKTNEILNFMNESGFTPSLATYNSLM 496
Query: 247 SFET---NYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVR 303
+ N++ ++ ++ G++PD +SY +I AY + R +EA +F EM ++G+
Sbjct: 497 YMHSRSENFERSEEVLKEILAKGIKPDTISYNTVIFAYCRNGRMKEASRIFSEMRESGLV 556
Query: 304 PTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKF 363
P YN + ++A M + A V + M + C P+ +Y +++ Y + + A F
Sbjct: 557 PDVITYNTFVASYAADSMFEDAIDVVRYMIKHGCKPNQNTYNSVVDGYCKHNHRDDAIMF 616
Query: 364 FRRLKQ 369
L +
Sbjct: 617 ISSLHE 622
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 87/195 (44%), Gaps = 1/195 (0%)
Query: 275 ALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRR 334
A++I+ GK + A ++ ++ G AY L+ A +G +A VFK M
Sbjct: 2 AVIISMLGKEGKVSVAASLLNDLHKDGFGLDVYAYTSLITACVSNGRYREAVMVFKKMEE 61
Query: 335 DRCSPDICSYTTMLSAYVNAS-DMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLE 393
+ C P + +Y +L+ Y + F +K G +P+ TY TLI + + E
Sbjct: 62 EGCKPTLITYNVILNVYGKMGMPWNKIKGLFEGMKNAGVLPDEYTYNTLITCCRRGSLHE 121
Query: 394 KMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILL 453
+ ++ M+ G P++ + ++D YGK++ A+ +EME G P N L+
Sbjct: 122 EAAAVFKDMKSMGFVPDKVTYNALLDVYGKSRRTKEAMEVLREMEVNGCSPSIVTYNSLI 181
Query: 454 SLAKTADERNEANEL 468
S EA EL
Sbjct: 182 SAYARDGLLKEAMEL 196
>gi|302808965|ref|XP_002986176.1| hypothetical protein SELMODRAFT_182249 [Selaginella moellendorffii]
gi|300146035|gb|EFJ12707.1| hypothetical protein SELMODRAFT_182249 [Selaginella moellendorffii]
Length = 609
Score = 168 bits (426), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 104/397 (26%), Positives = 195/397 (49%), Gaps = 17/397 (4%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
+ITA GD + A + + G P+VV++TAL+ A+ R + + A + M+ G
Sbjct: 153 IITAMANAGDLDGA---MDHLRSMGCDPNVVTYTALIAAFARAKKLEEAMKLLEEMRERG 209
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
P+ +TY +++ + + A++V +++ P+ F+ ++ + K G +
Sbjct: 210 CPPNLVTYNVLVDALCKLSMVGAAQDVVKKMIE---GGFAPNVMTFNSLVDGFCKRGNVD 266
Query: 222 KARKLFALMAERGVQQSTVTYNSL---MSFETNYKEVSKIYDQMQRAGLQPDVVSYALLI 278
ARKL +M +G++ + VTY++L + + E ++ ++M+ G+ PD +Y+ LI
Sbjct: 267 DARKLLGIMVAKGMRPNVVTYSALIDGLCKSQKFLEAKEVLEEMKTRGVTPDAFTYSALI 326
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCS 338
+ KA + EEA + M +G P Y+ ++ AF SG + +A+ + MR+ R S
Sbjct: 327 HGLCKADKIEEAEQMLRRMAGSGCTPDVVVYSSIIHAFCKSGKLLEAQKTLQEMRKQRKS 386
Query: 339 PDICSYTTMLSAYVNASDMEGAEKFFRRLKQDG-FVPNVITYGTLIKGYAKVNNLEKMME 397
PD+ +Y T++ + A+ ++++ G +P+V+TY T+I G K + L + +
Sbjct: 387 PDVVTYNTVIDGLCKLGKIAEAQVILEQMQESGDVLPDVVTYSTVINGLCKSDMLVEAQK 446
Query: 398 IYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLS--- 454
+ D+M G P+ +TTI+D K + A + M+ G P+ L+S
Sbjct: 447 LLDRMCKAGCNPDVVTYTTIIDGLCKCGRLEEAEYLLQGMKRAGCAPNVVTYTTLISGLC 506
Query: 455 LAKTADERNEANELLGNFNHPNN----EPGINGLSIS 487
A+ DE E + N P N +NGL +S
Sbjct: 507 KARKVDEAERVMEEMRNAGCPPNLVTYNTMVNGLCVS 543
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 105/404 (25%), Positives = 207/404 (51%), Gaps = 14/404 (3%)
Query: 44 AVAVLRSERTRGQPLPKDLVLGTLV-RLKQLKKWNVVSEVLEWLRIQSWWDFNEMDFLML 102
A+ +L R RG P P + LV L +L +V++ + I+ + N M F L
Sbjct: 198 AMKLLEEMRERGCP-PNLVTYNVLVDALCKLSMVGAAQDVVKKM-IEGGFAPNVMTFNSL 255
Query: 103 ITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGP 162
+ + K+G+ + A K+L M KG P+VV+++AL++ + ++ A+ + M++ G
Sbjct: 256 VDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQKFLEAKEVLEEMKTRGV 315
Query: 163 RPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEK 222
P A TY ++ +A+K +EAE++ + S PD ++ +I+ + K+G +
Sbjct: 316 TPDAFTYSALIHGLCKADKIEEAEQMLRRM---AGSGCTPDVVVYSSIIHAFCKSGKLLE 372
Query: 223 ARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSK---IYDQMQRAG-LQPDVVSYALLI 278
A+K M ++ VTYN+++ ++++ I +QMQ +G + PDVV+Y+ +I
Sbjct: 373 AQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILEQMQESGDVLPDVVTYSTVI 432
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCS 338
N K+ EA + + M AG P Y ++D G +++A + + M+R C+
Sbjct: 433 NGLCKSDMLVEAQKLLDRMCKAGCNPDVVTYTTIIDGLCKCGRLEEAEYLLQGMKRAGCA 492
Query: 339 PDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEI 398
P++ +YTT++S A ++ AE+ ++ G PN++TY T++ G +++ ++
Sbjct: 493 PNVVTYTTLISGLCKARKVDEAERVMEEMRNAGCPPNLVTYNTMVNGLCVSGRIKEAQQL 552
Query: 399 YDKMRVNG---IKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMES 439
+M+ +G P+ + TI++A + A ++M+S
Sbjct: 553 VQRMK-DGRAECSPDAATYRTIVNALMSSDLVQEAEQLLEQMKS 595
Score = 132 bits (331), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 78/300 (26%), Positives = 144/300 (48%), Gaps = 5/300 (1%)
Query: 148 KNAEAIFRRMQSSGP--RPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQK 205
K A A FR +S P +A ++ +L++ V K +EA ++F + E + +PD
Sbjct: 57 KLALAFFRWAPASIPGFSHTAFSWNSLLQVLVRCKKHREAGDLFRS---ELLASCEPDVC 113
Query: 206 MFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSKIYDQMQRA 265
++++I + AG A +L M G T+ +++ N ++ D ++
Sbjct: 114 SYNIVISGFCNAGDLHAALELLEEMKSAGFAPDAFTHTPIITAMANAGDLDGAMDHLRSM 173
Query: 266 GLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQA 325
G P+VV+Y LI A+ +A++ EEA+ + EEM + G P YN+L+DA MV A
Sbjct: 174 GCDPNVVTYTALIAAFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAA 233
Query: 326 RTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKG 385
+ V K M +P++ ++ +++ + +++ A K + G PNV+TY LI G
Sbjct: 234 QDVVKKMIEGGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDG 293
Query: 386 YAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPD 445
K + E+ ++M+ G+ P+ ++ ++ K + A + M G PD
Sbjct: 294 LCKSQKFLEAKEVLEEMKTRGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPD 353
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 82/332 (24%), Positives = 149/332 (44%), Gaps = 11/332 (3%)
Query: 126 GYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEA 185
G++ + S +L++ R +++ A +FR + P +Y I++ F A A
Sbjct: 72 GFSHTAFSWNSLLQVLVRCKKHREAGDLFRSELLASCEPDVCSYNIVISGFCNAGDLHAA 131
Query: 186 EEVFMTLLDEEKSP-LKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNS 244
E LL+E KS PD +I AG + A M G + VTY +
Sbjct: 132 LE----LLEEMKSAGFAPDAFTHTPIITAMANAGDLDGAMDHLRSM---GCDPNVVTYTA 184
Query: 245 LMSFETNYK---EVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAG 301
L++ K E K+ ++M+ G P++V+Y +L++A K A V ++M++ G
Sbjct: 185 LIAAFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKKMIEGG 244
Query: 302 VRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAE 361
P +N L+D F G VD AR + M P++ +Y+ ++ + A+
Sbjct: 245 FAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQKFLEAK 304
Query: 362 KFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAY 421
+ +K G P+ TY LI G K + +E+ ++ +M +G P+ ++++I+ A+
Sbjct: 305 EVLEEMKTRGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYSSIIHAF 364
Query: 422 GKNKDFDSAVVWYKEMESCGFPPDQKAKNILL 453
K+ A +EM PD N ++
Sbjct: 365 CKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVI 396
>gi|255574497|ref|XP_002528160.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223532417|gb|EEF34211.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 569
Score = 168 bits (425), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 111/456 (24%), Positives = 212/456 (46%), Gaps = 42/456 (9%)
Query: 61 DLVLGTLVRLKQLKKWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQ----------- 109
D ++ +V+L+ KKW+++ + +W+ +S + + M F ++I AYG++
Sbjct: 113 DDLINVVVQLRLNKKWDLILLICQWILYRSSFQSDVMIFNLVIDAYGRKSLYKMAETTYF 172
Query: 110 ------------------------GDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGG 145
G KAE + + M K G PS + + A ++ + G
Sbjct: 173 ELIEARCIPTEDTYALLLKAYCTSGLLEKAEAIFAEMRKYGLPPSAIVYNAYIDGLMKAG 232
Query: 146 RYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQK 205
+ A IF+RM+ +PS TY +++ L +A++ A ++F + ++ KP+
Sbjct: 233 NPQRAVEIFQRMKRDCCQPSTETYTLLINLHGKASQSYMALKLFNEMRSQK---CKPNIC 289
Query: 206 MFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYK---EVSKIYDQM 262
+ ++ + + G EKA ++F + E G + YN+LM + ++I+ M
Sbjct: 290 TYTALVNAFAREGLCEKAEEIFEQLQEDGHEPDVYAYNALMEAYSRAGFPYGAAEIFSLM 349
Query: 263 QRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMV 322
Q G +PD SY ++++AYG+ E+A AVFEEM G+ PT K++ +LL A++ +G V
Sbjct: 350 QHMGCEPDRASYNIMVDAYGRGGLHEDAQAVFEEMKRLGITPTMKSHMLLLSAYSKAGDV 409
Query: 323 DQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTL 382
+ + + PD +ML+ Y E+ ++ + ++ TY L
Sbjct: 410 AKCEDIVNELHESGLEPDTFVLNSMLNLYGRLGQFGKMEEVLTAMESGPYATDISTYNIL 469
Query: 383 IKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGF 442
I Y + EKM ++ + +KP+ +T+ + AY + K + + ++EM G
Sbjct: 470 INIYGRAGFFEKMEGLFQSLAAKNLKPDVVTWTSRLGAYSRKKLYTKCLEIFEEMIDAGC 529
Query: 443 PPDQKAKNILLSLAKTADERNEANELLGNFNHPNNE 478
PD + +LLS + D+ + ++ H N E
Sbjct: 530 HPDGRTAKVLLSSCSSEDQIEQVTTVIRTM-HKNME 564
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 71/286 (24%), Positives = 143/286 (50%), Gaps = 3/286 (1%)
Query: 197 KSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLM-SFETN--YK 253
+S + D +F+++I Y + Y+ A + + E + TY L+ ++ T+ +
Sbjct: 141 RSSFQSDVMIFNLVIDAYGRKSLYKMAETTYFELIEARCIPTEDTYALLLKAYCTSGLLE 200
Query: 254 EVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILL 313
+ I+ +M++ GL P + Y I+ KA + A+ +F+ M +P+ + Y +L+
Sbjct: 201 KAEAIFAEMRKYGLPPSAIVYNAYIDGLMKAGNPQRAVEIFQRMKRDCCQPSTETYTLLI 260
Query: 314 DAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFV 373
+ + A +F MR +C P+IC+YT +++A+ E AE+ F +L++DG
Sbjct: 261 NLHGKASQSYMALKLFNEMRSQKCKPNICTYTALVNAFAREGLCEKAEEIFEQLQEDGHE 320
Query: 374 PNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVW 433
P+V Y L++ Y++ EI+ M+ G +P++ + ++DAYG+ + A
Sbjct: 321 PDVYAYNALMEAYSRAGFPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRGGLHEDAQAV 380
Query: 434 YKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEP 479
++EM+ G P K+ +LLS A + + +++ + EP
Sbjct: 381 FEEMKRLGITPTMKSHMLLLSAYSKAGDVAKCEDIVNELHESGLEP 426
Score = 105 bits (263), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 113/228 (49%)
Query: 262 MQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGM 321
+ R+ Q DV+ + L+I+AYG+ + A + E+++A PT Y +LL A+ SG+
Sbjct: 139 LYRSSFQSDVMIFNLVIDAYGRKSLYKMAETTYFELIEARCIPTEDTYALLLKAYCTSGL 198
Query: 322 VDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGT 381
+++A +F MR+ P Y + + A + + A + F+R+K+D P+ TY
Sbjct: 199 LEKAEAIFAEMRKYGLPPSAIVYNAYIDGLMKAGNPQRAVEIFQRMKRDCCQPSTETYTL 258
Query: 382 LIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCG 441
LI + K + ++++++MR KPN +T +++A+ + + A +++++ G
Sbjct: 259 LINLHGKASQSYMALKLFNEMRSQKCKPNICTYTALVNAFAREGLCEKAEEIFEQLQEDG 318
Query: 442 FPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGINGLSISVD 489
PD A N L+ A A E+ H EP +I VD
Sbjct: 319 HEPDVYAYNALMEAYSRAGFPYGAAEIFSLMQHMGCEPDRASYNIMVD 366
>gi|413921112|gb|AFW61044.1| hypothetical protein ZEAMMB73_032153 [Zea mays]
Length = 332
Score = 168 bits (425), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 87/143 (60%), Positives = 100/143 (69%), Gaps = 27/143 (18%)
Query: 178 EANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQ 237
E +K+KEAE +F LL+E+++ KPDQKMFHMMIYMYKKAG Y +A
Sbjct: 215 EGDKYKEAEAIFEDLLNEKRTSFKPDQKMFHMMIYMYKKAGDYGQA-------------- 260
Query: 238 STVTYNSLMSFETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEM 297
+YKEVS IYDQM+R L+PDVVSY+LLI AYGKARREEEALAVFEEM
Sbjct: 261 -------------HYKEVSSIYDQMERTRLKPDVVSYSLLIKAYGKARREEEALAVFEEM 307
Query: 298 LDAGVRPTHKAYNILLDAFAISG 320
LDAGVRPT K+YNIL DAF I G
Sbjct: 308 LDAGVRPTRKSYNILPDAFGIPG 330
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 44/83 (53%), Gaps = 5/83 (6%)
Query: 99 FLMLITAYGKQGDFNKAE-----KVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAI 153
F M+I Y K GD+ +A + M + P VVS++ L++AYG+ R + A A+
Sbjct: 244 FHMMIYMYKKAGDYGQAHYKEVSSIYDQMERTRLKPDVVSYSLLIKAYGKARREEEALAV 303
Query: 154 FRRMQSSGPRPSALTYQIILKLF 176
F M +G RP+ +Y I+ F
Sbjct: 304 FEEMLDAGVRPTRKSYNILPDAF 326
Score = 45.8 bits (107), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 26/107 (24%), Positives = 52/107 (48%), Gaps = 13/107 (12%)
Query: 321 MVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAE-----KFFRRLKQDGFVPN 375
++++ RT FK PD + M+ Y A D A + ++++ P+
Sbjct: 229 LLNEKRTSFK--------PDQKMFHMMIYMYKKAGDYGQAHYKEVSSIYDQMERTRLKPD 280
Query: 376 VITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYG 422
V++Y LIK Y K E+ + ++++M G++P + + + DA+G
Sbjct: 281 VVSYSLLIKAYGKARREEEALAVFEEMLDAGVRPTRKSYNILPDAFG 327
Score = 44.3 bits (103), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 51/101 (50%), Gaps = 8/101 (7%)
Query: 360 AEKFFRRL---KQDGFVPNVITYGTLIKGYAKVN-----NLEKMMEIYDKMRVNGIKPNQ 411
AE F L K+ F P+ + +I Y K + +++ IYD+M +KP+
Sbjct: 222 AEAIFEDLLNEKRTSFKPDQKMFHMMIYMYKKAGDYGQAHYKEVSSIYDQMERTRLKPDV 281
Query: 412 TIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNIL 452
++ ++ AYGK + + A+ ++EM G P +K+ NIL
Sbjct: 282 VSYSLLIKAYGKARREEEALAVFEEMLDAGVRPTRKSYNIL 322
>gi|359479583|ref|XP_002275680.2| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
mitochondrial-like [Vitis vinifera]
gi|297735515|emb|CBI17955.3| unnamed protein product [Vitis vinifera]
Length = 627
Score = 168 bits (425), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 112/436 (25%), Positives = 202/436 (46%), Gaps = 14/436 (3%)
Query: 56 QPLPK----DLVLGTLVRLKQLKKWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGD 111
QP P + +LG + ++K + ++V+S I DF ++ +LI Y
Sbjct: 87 QPTPPISSFNTLLGAVAKIK--RYFDVISLYKRMSLIGLAPDFITLN--ILINCYCNLNK 142
Query: 112 FNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQI 171
+ VL M ++G++P+ V+ T+L++ G R A + R+M G RP+ +TY
Sbjct: 143 VDFGLAVLGEMLRRGHSPNTVTFTSLVKGLCLGSRISEATGLLRKMVRMGYRPNVVTYGT 202
Query: 172 ILKLFVEANKFKEAEEVFMTLLDEEKS---PLKPDQKMFHMMIYMYKKAGGYEKARKLFA 228
+L A ++ +L+ +KP+ + +I K G +K ++LF
Sbjct: 203 LLNGLCMTGNTMLAVKLHEEMLNGNGGFGVTIKPNLVCYCTIIDSLCKDGLIDKGKELFL 262
Query: 229 LMAERGVQQSTVTYNSL---MSFETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKAR 285
M RG+ V Y+S+ M ++ ++++M G+ P+VV++ +LI+A KA
Sbjct: 263 EMKGRGISPDVVAYSSIIHGMCHTGRWEGAKGLFNEMVDEGVHPNVVTFNVLIDALCKAG 322
Query: 286 REEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYT 345
+ EEA + + M+ G P YN L+D F + G +D AR +F M D SY
Sbjct: 323 KMEEANHLLKLMIQRGESPDTFTYNTLIDGFCLEGRIDDARDLFVSMESKGIETDAVSYN 382
Query: 346 TMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVN 405
+++ Y + M A+K +R + +P VITY TL+ G + + ++ +M+V+
Sbjct: 383 VLINGYCKSGRMVEAKKLYREMMCKEIMPTVITYNTLLTGLFREGKVRDAWNLFGEMKVH 442
Query: 406 GIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEA 465
+ P + ++D KN A+ + +E+ F P + N L+ A + A
Sbjct: 443 DLTPESCTYNILLDGLCKNNHLSEAMELFHYLENHDFQPSIQIFNCLIDGLCKARKIEIA 502
Query: 466 NELLGNFNHPNNEPGI 481
EL +H EP +
Sbjct: 503 RELFNRLSHEGLEPNV 518
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 98/381 (25%), Positives = 177/381 (46%), Gaps = 6/381 (1%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + + +I + K G +K +++ M +G +P VV++++++ GR++ A+ +F
Sbjct: 237 NLVCYCTIIDSLCKDGLIDKGKELFLEMKGRGISPDVVAYSSIIHGMCHTGRWEGAKGLF 296
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
M G P+ +T+ +++ +A K +EA + ++ +SP D ++ +I +
Sbjct: 297 NEMVDEGVHPNVVTFNVLIDALCKAGKMEEANHLLKLMIQRGESP---DTFTYNTLIDGF 353
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETN---YKEVSKIYDQMQRAGLQPDV 271
G + AR LF M +G++ V+YN L++ E K+Y +M + P V
Sbjct: 354 CLEGRIDDARDLFVSMESKGIETDAVSYNVLINGYCKSGRMVEAKKLYREMMCKEIMPTV 413
Query: 272 VSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKC 331
++Y L+ + + +A +F EM + P YNILLD + + +A +F
Sbjct: 414 ITYNTLLTGLFREGKVRDAWNLFGEMKVHDLTPESCTYNILLDGLCKNNHLSEAMELFHY 473
Query: 332 MRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNN 391
+ P I + ++ A +E A + F RL +G PNVITY +I G K
Sbjct: 474 LENHDFQPSIQIFNCLIDGLCKARKIEIARELFNRLSHEGLEPNVITYTVMIHGLCKSGQ 533
Query: 392 LEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNI 451
LE +++ M G PN F T+M + +N + V +EM F PD +I
Sbjct: 534 LENAKDLFLGMEEKGCAPNLVTFNTLMRGFCQNDEMQKVVELLQEMAEKDFSPDASTISI 593
Query: 452 LLSLAKTADERNEANELLGNF 472
++ L ++ E LL F
Sbjct: 594 VVDLLSKDEKYREYLHLLPTF 614
Score = 155 bits (391), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 119/470 (25%), Positives = 211/470 (44%), Gaps = 17/470 (3%)
Query: 37 QIEEVGSAVAVLRSERTRGQPLPKDLVLGTLVRLKQLKKWNVVSEVLEWLR--IQSWWDF 94
+ +V +AVL RG P + +LV K L + +SE LR ++ +
Sbjct: 139 NLNKVDFGLAVLGEMLRRGHS-PNTVTFTSLV--KGLCLGSRISEATGLLRKMVRMGYRP 195
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLS-FMNKKG-----YAPSVVSHTALMEAYGRGGRYK 148
N + + L+ G+ A K+ +N G P++V + ++++ + G
Sbjct: 196 NVVTYGTLLNGLCMTGNTMLAVKLHEEMLNGNGGFGVTIKPNLVCYCTIIDSLCKDGLID 255
Query: 149 NAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFH 208
+ +F M+ G P + Y I+ +++ A+ +F ++DE + P+ F+
Sbjct: 256 KGKELFLEMKGRGISPDVVAYSSIIHGMCHTGRWEGAKGLFNEMVDEG---VHPNVVTFN 312
Query: 209 MMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLM---SFETNYKEVSKIYDQMQRA 265
++I KAG E+A L LM +RG T TYN+L+ E + ++ M+
Sbjct: 313 VLIDALCKAGKMEEANHLLKLMIQRGESPDTFTYNTLIDGFCLEGRIDDARDLFVSMESK 372
Query: 266 GLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQA 325
G++ D VSY +LIN Y K+ R EA ++ EM+ + PT YN LL G V A
Sbjct: 373 GIETDAVSYNVLINGYCKSGRMVEAKKLYREMMCKEIMPTVITYNTLLTGLFREGKVRDA 432
Query: 326 RTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKG 385
+F M+ +P+ C+Y +L + + A + F L+ F P++ + LI G
Sbjct: 433 WNLFGEMKVHDLTPESCTYNILLDGLCKNNHLSEAMELFHYLENHDFQPSIQIFNCLIDG 492
Query: 386 YAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPD 445
K +E E+++++ G++PN +T ++ K+ ++A + ME G P+
Sbjct: 493 LCKARKIEIARELFNRLSHEGLEPNVITYTVMIHGLCKSGQLENAKDLFLGMEEKGCAPN 552
Query: 446 QKAKNILLSLAKTADERNEANELLGNFNHPNNEPGINGLSISVDEEDDDD 495
N L+ DE + ELL + P + +SI VD D+
Sbjct: 553 LVTFNTLMRGFCQNDEMQKVVELLQEMAEKDFSPDASTISIVVDLLSKDE 602
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/152 (22%), Positives = 69/152 (45%)
Query: 286 REEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYT 345
+ EA +VF ++D P ++N LL A A +++K M +PD +
Sbjct: 72 KRSEAFSVFNHLIDMQPTPPISSFNTLLGAVAKIKRYFDVISLYKRMSLIGLAPDFITLN 131
Query: 346 TMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVN 405
+++ Y N + ++ + + G PN +T+ +L+KG + + + + KM
Sbjct: 132 ILINCYCNLNKVDFGLAVLGEMLRRGHSPNTVTFTSLVKGLCLGSRISEATGLLRKMVRM 191
Query: 406 GIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEM 437
G +PN + T+++ + AV ++EM
Sbjct: 192 GYRPNVVTYGTLLNGLCMTGNTMLAVKLHEEM 223
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 30/132 (22%), Positives = 55/132 (41%)
Query: 323 DQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTL 382
+A +VF + + +P I S+ T+L A ++R+ G P+ IT L
Sbjct: 74 SEAFSVFNHLIDMQPTPPISSFNTLLGAVAKIKRYFDVISLYKRMSLIGLAPDFITLNIL 133
Query: 383 IKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGF 442
I Y +N ++ + + +M G PN FT+++ A ++M G+
Sbjct: 134 INCYCNLNKVDFGLAVLGEMLRRGHSPNTVTFTSLVKGLCLGSRISEATGLLRKMVRMGY 193
Query: 443 PPDQKAKNILLS 454
P+ LL+
Sbjct: 194 RPNVVTYGTLLN 205
>gi|15238925|ref|NP_199046.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75154282|sp|Q8L844.1|PP413_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g42310, mitochondrial; Flags: Precursor
gi|21539517|gb|AAM53311.1| maize crp1 protein-like [Arabidopsis thaliana]
gi|332007411|gb|AED94794.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 709
Score = 167 bits (424), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 108/425 (25%), Positives = 208/425 (48%), Gaps = 14/425 (3%)
Query: 36 NQIEEVGSAVAVLRSERTRGQPLPKDLVLGTLVRLKQLKKWNVVSEVLEWLRIQSWWDFN 95
N IE+ + +A +R + + + LV+ +L R ++ ++ E R D
Sbjct: 211 NDIEKALNLIAKMRQDGYQSDFVNYSLVIQSLTRSNKIDSVMLLRLYKEIER-----DKL 265
Query: 96 EMDFLM---LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEA 152
E+D + +I + K GD +KA ++L G + + +++ A GR AEA
Sbjct: 266 ELDVQLVNDIIMGFAKSGDPSKALQLLGMAQATGLSAKTATLVSIISALADSGRTLEAEA 325
Query: 153 IFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIY 212
+F ++ SG +P Y +LK +V+ K+AE + + EK + PD+ + ++I
Sbjct: 326 LFEELRQSGIKPRTRAYNALLKGYVKTGPLKDAESMVSEM---EKRGVSPDEHTYSLLID 382
Query: 213 MYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSF---ETNYKEVSKIYDQMQRAGLQP 269
Y AG +E AR + M VQ ++ ++ L++ +++ ++ +M+ G++P
Sbjct: 383 AYVNAGRWESARIVLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSIGVKP 442
Query: 270 DVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVF 329
D Y ++I+ +GK + A+ F+ ML G+ P +N L+D G A +F
Sbjct: 443 DRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMF 502
Query: 330 KCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKV 389
+ M R C P +Y M+++Y + + ++ ++K G +PNV+T+ TL+ Y K
Sbjct: 503 EAMERRGCLPCATTYNIMINSYGDQERWDDMKRLLGKMKSQGILPNVVTHTTLVDVYGKS 562
Query: 390 NNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAK 449
+E ++M+ G+KP+ T++ +++AY + + AV ++ M S G P A
Sbjct: 563 GRFNDAIECLEEMKSVGLKPSSTMYNALINAYAQRGLSEQAVNAFRVMTSDGLKPSLLAL 622
Query: 450 NILLS 454
N L++
Sbjct: 623 NSLIN 627
Score = 151 bits (382), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 90/356 (25%), Positives = 175/356 (49%), Gaps = 6/356 (1%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
L+ Y K G AE ++S M K+G +P +++ L++AY GR+++A + + M++
Sbjct: 345 LLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTYSLLIDAYVNAGRWESARIVLKEMEAGD 404
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
+P++ + +L F + E ++ F L + + +KPD++ ++++I + K +
Sbjct: 405 VQPNSFVFSRLLAGFRDRG---EWQKTFQVLKEMKSIGVKPDRQFYNVVIDTFGKFNCLD 461
Query: 222 KARKLFALMAERGVQQSTVTYNSLMSFETNYKE---VSKIYDQMQRAGLQPDVVSYALLI 278
A F M G++ VT+N+L+ + ++++ M+R G P +Y ++I
Sbjct: 462 HAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMERRGCLPCATTYNIMI 521
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCS 338
N+YG R ++ + +M G+ P + L+D + SG + A + M+
Sbjct: 522 NSYGDQERWDDMKRLLGKMKSQGILPNVVTHTTLVDVYGKSGRFNDAIECLEEMKSVGLK 581
Query: 339 PDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEI 398
P Y +++AY E A FR + DG P+++ +LI + + + +
Sbjct: 582 PSSTMYNALINAYAQRGLSEQAVNAFRVMTSDGLKPSLLALNSLINAFGEDRRDAEAFAV 641
Query: 399 YDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLS 454
M+ NG+KP+ +TT+M A + F V Y+EM G PD+KA+++L S
Sbjct: 642 LQYMKENGVKPDVVTYTTLMKALIRVDKFQKVPVVYEEMIMSGCKPDRKARSMLRS 697
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 103/447 (23%), Positives = 186/447 (41%), Gaps = 81/447 (18%)
Query: 82 VLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAY 141
V+ WL+ + E+ + +LI A G+ +A F+ + + +++ AL+ A
Sbjct: 153 VVSWLQKHNLCFSYELLYSILIHALGRSEKLYEA-----FLLSQKQTLTPLTYNALIGAC 207
Query: 142 GRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDE-EKSPL 200
R + A + +M+ G + + Y ++++ +NK + + L E E+ L
Sbjct: 208 ARNNDIEKALNLIAKMRQDGYQSDFVNYSLVIQSLTRSNKIDSV--MLLRLYKEIERDKL 265
Query: 201 KPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMS------------- 247
+ D ++ + +I + K+G KA +L + G+ T T S++S
Sbjct: 266 ELDVQLVNDIIMGFAKSGDPSKALQLLGMAQATGLSAKTATLVSIISALADSGRTLEAEA 325
Query: 248 -FE----TNYKEVSKIYD--------------------QMQRAGLQPDVVSYALLINAYG 282
FE + K ++ Y+ +M++ G+ PD +Y+LLI+AY
Sbjct: 326 LFEELRQSGIKPRTRAYNALLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTYSLLIDAYV 385
Query: 283 KARREEEA-----------------------------------LAVFEEMLDAGVRPTHK 307
A R E A V +EM GV+P +
Sbjct: 386 NAGRWESARIVLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSIGVKPDRQ 445
Query: 308 AYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRL 367
YN+++D F +D A T F M + PD ++ T++ + AE+ F +
Sbjct: 446 FYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAM 505
Query: 368 KQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDF 427
++ G +P TY +I Y + M + KM+ GI PN TT++D YGK+ F
Sbjct: 506 ERRGCLPCATTYNIMINSYGDQERWDDMKRLLGKMKSQGILPNVVTHTTLVDVYGKSGRF 565
Query: 428 DSAVVWYKEMESCGFPPDQKAKNILLS 454
+ A+ +EM+S G P N L++
Sbjct: 566 NDAIECLEEMKSVGLKPSSTMYNALIN 592
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 65/254 (25%), Positives = 121/254 (47%), Gaps = 8/254 (3%)
Query: 101 MLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSS 160
++I +GK + A M +G P V+ L++ + + GR+ AE +F M+
Sbjct: 449 VVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMERR 508
Query: 161 GPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSP-LKPDQKMFHMMIYMYKKAGG 219
G P A TY I++ + + ++ + + LL + KS + P+ ++ +Y K+G
Sbjct: 509 GCLPCATTYNIMINSYGDQERWDDMKR----LLGKMKSQGILPNVVTHTTLVDVYGKSGR 564
Query: 220 YEKARKLFALMAERGVQQSTVTYNSLMSFETN---YKEVSKIYDQMQRAGLQPDVVSYAL 276
+ A + M G++ S+ YN+L++ ++ + M GL+P +++
Sbjct: 565 FNDAIECLEEMKSVGLKPSSTMYNALINAYAQRGLSEQAVNAFRVMTSDGLKPSLLALNS 624
Query: 277 LINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDR 336
LINA+G+ RR+ EA AV + M + GV+P Y L+ A + V++ M
Sbjct: 625 LINAFGEDRRDAEAFAVLQYMKENGVKPDVVTYTTLMKALIRVDKFQKVPVVYEEMIMSG 684
Query: 337 CSPDICSYTTMLSA 350
C PD + + + SA
Sbjct: 685 CKPDRKARSMLRSA 698
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 78/189 (41%), Gaps = 41/189 (21%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + L+ YGK G FN A + L M G PS + AL+ AY + G + A F
Sbjct: 548 NVVTHTTLVDVYGKSGRFNDAIECLEEMKSVGLKPSSTMYNALINAYAQRGLSEQAVNAF 607
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
R M S G +PS L ++ F E + D + F ++ Y
Sbjct: 608 RVMTSDGLKPSLLALNSLINAFGEDRR---------------------DAEAFAVLQY-- 644
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFET---NYKEVSKIYDQMQRAGLQPDV 271
M E GV+ VTY +LM +++V +Y++M +G +PD
Sbjct: 645 ---------------MKENGVKPDVVTYTTLMKALIRVDKFQKVPVVYEEMIMSGCKPDR 689
Query: 272 VSYALLINA 280
+ ++L +A
Sbjct: 690 KARSMLRSA 698
>gi|449523421|ref|XP_004168722.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
mitochondrial-like [Cucumis sativus]
Length = 628
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 101/398 (25%), Positives = 196/398 (49%), Gaps = 13/398 (3%)
Query: 76 WNVVSEVLEWLRIQS-WWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSH 134
W + +E+ LRI+S + FN ++I K+G KA+ + M G P++V++
Sbjct: 206 WVLYAEMFR-LRIKSSVYTFN-----IMINVLCKEGKLKKAKDFVGHMETSGVKPNIVTY 259
Query: 135 TALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLD 194
++ Y GR + A+AI M+ P + TY ++ + + +EA ++F ++
Sbjct: 260 NTIVHGYCSSGRVEAADAILTTMKRQKIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQ 319
Query: 195 EEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMS---FETN 251
+ L+P +++ +I + G + A M ++G+ + TYNSL+ E
Sbjct: 320 KG---LRPSAVIYNTLIDGFCNKGNLDMASAYKDEMLKKGISPTMSTYNSLIHALFMEQR 376
Query: 252 YKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNI 311
E + ++Q G+ PD ++Y +LIN Y + ++A + +EML +G++PT K Y
Sbjct: 377 TDEAECMIKEIQEKGISPDAITYNILINGYCRCANAKKAFLLHDEMLASGIKPTKKTYTS 436
Query: 312 LLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDG 371
LL + + +A +FK + + PD + ++ + + S+++GA + + + +
Sbjct: 437 LLHVLSKKNRMKEADDLFKKITSEGVLPDAIMFNALIDGHCSNSNVKGAFELLKDMDRMK 496
Query: 372 FVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAV 431
P+ +T+ T+++G+ + +E+ E++D+M+ GIKP+ F T++ Y + D A
Sbjct: 497 VPPDEVTFNTIMQGHCREGKVEEARELFDEMKRRGIKPDHISFNTLISGYSRRGDIKDAF 556
Query: 432 VWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELL 469
EM GF P N L+ E + A ELL
Sbjct: 557 RVRNEMLDTGFNPTVLTYNALVQGLCKNQEGDLAEELL 594
Score = 136 bits (342), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 88/365 (24%), Positives = 175/365 (47%), Gaps = 9/365 (2%)
Query: 111 DFNKAEKVLSF---MNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSAL 167
D N+A++ M +KG P++ + +L+ + + R + A ++ M + S
Sbjct: 163 DMNRADEAFECFYTMKEKGVLPTIETCNSLLSLFLKLNRTEAAWVLYAEMFRLRIKSSVY 222
Query: 168 TYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLF 227
T+ I++ + + K K+A++ + E S +KP+ ++ +++ Y +G E A +
Sbjct: 223 TFNIMINVLCKEGKLKKAKDFVGHM---ETSGVKPNIVTYNTIVHGYCSSGRVEAADAIL 279
Query: 228 ALMAERGVQQSTVTYNSLMSF---ETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKA 284
M + ++ + TY SL+S + +E SKI+++M + GL+P V Y LI+ +
Sbjct: 280 TTMKRQKIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAVIYNTLIDGFCNK 339
Query: 285 RREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSY 344
+ A A +EML G+ PT YN L+ A + D+A + K ++ SPD +Y
Sbjct: 340 GNLDMASAYKDEMLKKGISPTMSTYNSLIHALFMEQRTDEAECMIKEIQEKGISPDAITY 399
Query: 345 TTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRV 404
+++ Y ++ + A + G P TY +L+ +K N +++ +++ K+
Sbjct: 400 NILINGYCRCANAKKAFLLHDEMLASGIKPTKKTYTSLLHVLSKKNRMKEADDLFKKITS 459
Query: 405 NGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNE 464
G+ P+ +F ++D + N + A K+M+ PPD+ N ++ + E
Sbjct: 460 EGVLPDAIMFNALIDGHCSNSNVKGAFELLKDMDRMKVPPDEVTFNTIMQGHCREGKVEE 519
Query: 465 ANELL 469
A EL
Sbjct: 520 ARELF 524
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 88/326 (26%), Positives = 154/326 (47%), Gaps = 8/326 (2%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
LI+ KQG +A K+ M +KG PS V + L++ + G A A M G
Sbjct: 297 LISGMCKQGRLEEASKIFEEMVQKGLRPSAVIYNTLIDGFCNKGNLDMASAYKDEMLKKG 356
Query: 162 PRPSALTY-QIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGY 220
P+ TY +I LF+E + EAE + + +EK + PD ++++I Y +
Sbjct: 357 ISPTMSTYNSLIHALFME-QRTDEAECMIKEI--QEKG-ISPDAITYNILINGYCRCANA 412
Query: 221 EKARKLFALMAERGVQQSTVTYNSLM---SFETNYKEVSKIYDQMQRAGLQPDVVSYALL 277
+KA L M G++ + TY SL+ S + KE ++ ++ G+ PD + + L
Sbjct: 413 KKAFLLHDEMLASGIKPTKKTYTSLLHVLSKKNRMKEADDLFKKITSEGVLPDAIMFNAL 472
Query: 278 INAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRC 337
I+ + + A + ++M V P +N ++ G V++AR +F M+R
Sbjct: 473 IDGHCSNSNVKGAFELLKDMDRMKVPPDEVTFNTIMQGHCREGKVEEARELFDEMKRRGI 532
Query: 338 SPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMME 397
PD S+ T++S Y D++ A + + GF P V+TY L++G K + E
Sbjct: 533 KPDHISFNTLISGYSRRGDIKDAFRVRNEMLDTGFNPTVLTYNALVQGLCKNQEGDLAEE 592
Query: 398 IYDKMRVNGIKPNQTIFTTIMDAYGK 423
+ +M G+ P+ T + T+++ K
Sbjct: 593 LLKEMVSKGMTPDDTTYFTLIEGIAK 618
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 87/356 (24%), Positives = 171/356 (48%), Gaps = 13/356 (3%)
Query: 41 VGSAVAVLRSERTRGQPLPKDLVLGTLVR-LKQLKKWNVVSEVLEWLRIQSWWDFNEMDF 99
V +A A+L + + R + P G+L+ + + + S++ E + +Q + + +
Sbjct: 272 VEAADAILTTMK-RQKIEPDSFTYGSLISGMCKQGRLEEASKIFEEM-VQKGLRPSAVIY 329
Query: 100 LMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQS 159
LI + +G+ + A M KKG +P++ ++ +L+ A R AE + + +Q
Sbjct: 330 NTLIDGFCNKGNLDMASAYKDEMLKKGISPTMSTYNSLIHALFMEQRTDEAECMIKEIQE 389
Query: 160 SGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEE--KSPLKPDQKMFHMMIYMYKKA 217
G P A+TY I++ + K+A LL +E S +KP +K + ++++ K
Sbjct: 390 KGISPDAITYNILINGYCRCANAKKA-----FLLHDEMLASGIKPTKKTYTSLLHVLSKK 444
Query: 218 GGYEKARKLFALMAERGVQQSTVTYNSLM---SFETNYKEVSKIYDQMQRAGLQPDVVSY 274
++A LF + GV + +N+L+ +N K ++ M R + PD V++
Sbjct: 445 NRMKEADDLFKKITSEGVLPDAIMFNALIDGHCSNSNVKGAFELLKDMDRMKVPPDEVTF 504
Query: 275 ALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRR 334
++ + + + EEA +F+EM G++P H ++N L+ ++ G + A V M
Sbjct: 505 NTIMQGHCREGKVEEARELFDEMKRRGIKPDHISFNTLISGYSRRGDIKDAFRVRNEMLD 564
Query: 335 DRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVN 390
+P + +Y ++ + + AE+ + + G P+ TY TLI+G AKVN
Sbjct: 565 TGFNPTVLTYNALVQGLCKNQEGDLAEELLKEMVSKGMTPDDTTYFTLIEGIAKVN 620
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/225 (22%), Positives = 90/225 (40%), Gaps = 36/225 (16%)
Query: 264 RAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVD 323
R G + +V + LI + R +EA F M + GV PT + N LL F +
Sbjct: 145 RLGFKSSIV-FDYLIKSCCDMNRADEAFECFYTMKEKGVLPTIETCNSLLSLFLKLNRTE 203
Query: 324 QARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLI 383
A ++ M R R + ++ M++ ++ A+ F ++ G PN++TY T++
Sbjct: 204 AAWVLYAEMFRLRIKSSVYTFNIMINVLCKEGKLKKAKDFVGHMETSGVKPNIVTYNTIV 263
Query: 384 KGY-----------------------------------AKVNNLEKMMEIYDKMRVNGIK 408
GY K LE+ +I+++M G++
Sbjct: 264 HGYCSSGRVEAADAILTTMKRQKIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLR 323
Query: 409 PNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILL 453
P+ I+ T++D + + D A + EM G P N L+
Sbjct: 324 PSAVIYNTLIDGFCNKGNLDMASAYKDEMLKKGISPTMSTYNSLI 368
>gi|302787647|ref|XP_002975593.1| hypothetical protein SELMODRAFT_103638 [Selaginella moellendorffii]
gi|300156594|gb|EFJ23222.1| hypothetical protein SELMODRAFT_103638 [Selaginella moellendorffii]
Length = 471
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 115/424 (27%), Positives = 189/424 (44%), Gaps = 42/424 (9%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N F +++ ++ KQG K+ M G +P + + L++ Y + GR A ++
Sbjct: 7 NRYTFRVVLKSFCKQGKLRDGYKLFEQMLDNGISPDGIEYNILIDGYAKKGRVDEANRLY 66
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
M S G PS TY +L F + K KEA E+F T+ ++ +PD + +I
Sbjct: 67 EEMVSVGLEPSIYTYNSLLNAFCKETKMKEAMELFKTMAEK---GFEPDVVTYSTIISGL 123
Query: 215 KKAGGYEKARK-LFALMAERGVQQSTVTYNSLMS-------FETNYK------------- 253
K G +A + LF M ERG +TV YN+L++ E YK
Sbjct: 124 CKTGKVTEALEMLFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYVPD 183
Query: 254 ------------------EVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFE 295
E + +D M G PDVV+Y L++A K + +EA+ +F+
Sbjct: 184 NITYNTILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKTDEAMKLFK 243
Query: 296 EMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNAS 355
+++ G P YN +L A +D+A +FK M C+P+ +Y+ +LS + A
Sbjct: 244 DVIAKGYMPDTVTYNSILLGLARKSNMDEAEEMFKKMVASGCAPNGATYSIVLSGHCRAK 303
Query: 356 DMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFT 415
++ A K + + G VP+V+TY L+ G K N ++K E++ M NG P+ ++
Sbjct: 304 KVDDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAPDIVSYS 363
Query: 416 TIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHP 475
+++ K A V + M PD NIL+ A + +EA +LL
Sbjct: 364 VVLNGLCKTNKVHDARVLFDRMIERKLVPDVVTFNILMDGLCKAGKLDEAKDLLDQMTCS 423
Query: 476 NNEP 479
P
Sbjct: 424 GCAP 427
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 99/382 (25%), Positives = 185/382 (48%), Gaps = 9/382 (2%)
Query: 70 LKQLKKWNVVSEVLEWLRIQSWWDF--NEMDFLMLITAYGKQGDFNKA-EKVLSFMNKKG 126
L K + E +E + + F + + + +I+ K G +A E + M ++G
Sbjct: 85 LNAFCKETKMKEAMELFKTMAEKGFEPDVVTYSTIISGLCKTGKVTEALEMLFHKMIERG 144
Query: 127 YAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAE 186
+ + V++ AL+ + + A + M S G P +TY IL K EA+
Sbjct: 145 CSANTVAYNALINGLCKDENIERAYKLLEEMASKGYVPDNITYNTILSGLCRMGKVSEAK 204
Query: 187 EVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLM 246
+ F ++ SP D ++ ++ K G ++A KLF + +G TVTYNS++
Sbjct: 205 QFFDSMPSRGYSP---DVVAYNGLLDALYKEGKTDEAMKLFKDVIAKGYMPDTVTYNSIL 261
Query: 247 ---SFETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVR 303
+ ++N E +++ +M +G P+ +Y+++++ + +A++ ++A V EEM G
Sbjct: 262 LGLARKSNMDEAEEMFKKMVASGCAPNGATYSIVLSGHCRAKKVDDAHKVLEEMSKIGAV 321
Query: 304 PTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKF 363
P YNILLD + +VD+A +F M + C+PDI SY+ +L+ + + A
Sbjct: 322 PDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAPDIVSYSVVLNGLCKTNKVHDARVL 381
Query: 364 FRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGK 423
F R+ + VP+V+T+ L+ G K L++ ++ D+M +G P+ + T+M+ K
Sbjct: 382 FDRMIERKLVPDVVTFNILMDGLCKAGKLDEAKDLLDQMTCSGCAPDYVAYNTLMNGLRK 441
Query: 424 NKDFDSAVVWYKEMESCGFPPD 445
A + M+ GF D
Sbjct: 442 QGRHIQADRLTQAMKEKGFLSD 463
Score = 144 bits (364), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 88/366 (24%), Positives = 176/366 (48%), Gaps = 7/366 (1%)
Query: 128 APSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEE 187
+P+ + +++++ + G+ ++ +F +M +G P + Y I++ + + + EA
Sbjct: 5 SPNRYTFRVVLKSFCKQGKLRDGYKLFEQMLDNGISPDGIEYNILIDGYAKKGRVDEANR 64
Query: 188 VFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMS 247
++ ++ L+P ++ ++ + K ++A +LF MAE+G + VTY++++S
Sbjct: 65 LYEEMVS---VGLEPSIYTYNSLLNAFCKETKMKEAMELFKTMAEKGFEPDVVTYSTIIS 121
Query: 248 FETNYKEVSK----IYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVR 303
+V++ ++ +M G + V+Y LIN K E A + EEM G
Sbjct: 122 GLCKTGKVTEALEMLFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYV 181
Query: 304 PTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKF 363
P + YN +L G V +A+ F M SPD+ +Y +L A + A K
Sbjct: 182 PDNITYNTILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKTDEAMKL 241
Query: 364 FRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGK 423
F+ + G++P+ +TY +++ G A+ +N+++ E++ KM +G PN ++ ++ + +
Sbjct: 242 FKDVIAKGYMPDTVTYNSILLGLARKSNMDEAEEMFKKMVASGCAPNGATYSIVLSGHCR 301
Query: 424 NKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGING 483
K D A +EM G PD NILL + ++A+EL P I
Sbjct: 302 AKKVDDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAPDIVS 361
Query: 484 LSISVD 489
S+ ++
Sbjct: 362 YSVVLN 367
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 70/134 (52%), Gaps = 2/134 (1%)
Query: 337 CSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMM 396
CSP+ ++ +L ++ + K F ++ +G P+ I Y LI GYAK +++
Sbjct: 4 CSPNRYTFRVVLKSFCKQGKLRDGYKLFEQMLDNGISPDGIEYNILIDGYAKKGRVDEAN 63
Query: 397 EIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLS-L 455
+Y++M G++P+ + ++++A+ K A+ +K M GF PD + ++S L
Sbjct: 64 RLYEEMVSVGLEPSIYTYNSLLNAFCKETKMKEAMELFKTMAEKGFEPDVVTYSTIISGL 123
Query: 456 AKTADERNEANELL 469
KT + EA E+L
Sbjct: 124 CKTG-KVTEALEML 136
>gi|225427506|ref|XP_002263778.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g31840-like [Vitis vinifera]
Length = 1131
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 104/394 (26%), Positives = 187/394 (47%), Gaps = 6/394 (1%)
Query: 99 FLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQ 158
F ++ AY + GD KA +V + M K+G +P+VV+++ L+ R GR A +F ++
Sbjct: 348 FSSIMDAYVRVGDLGKAIEVYTRMLKEGISPNVVTYSILINGLCRNGRVLEACGVFGQIL 407
Query: 159 SSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAG 218
G PS LTY ++ F ++ ++ ++ +L + P D + M+I + G
Sbjct: 408 KQGLEPSVLTYSSLIDGFCKSENLRDGFGLYGIMLRKGHVP---DVVVCSMLINGLSRQG 464
Query: 219 GYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVS---KIYDQMQRAGLQPDVVSYA 275
++A + F +RG+ + +N+L+ K K+Y M + PDVV+Y
Sbjct: 465 MMDEALRFFFQAVKRGLTLNNYLFNALIDGCFRLKRTRDGLKMYILMGMYKVIPDVVTYT 524
Query: 276 LLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRD 335
+L+ + R +EALA+F ++L G P H Y L+D F +FK M+ +
Sbjct: 525 VLVKGLAEQGRLDEALALFFQLLKKGFSPDHIIYCTLIDGFCKKRDPATGLQIFKLMQSN 584
Query: 336 RCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKM 395
PDIC Y +++ + +E + R + + G P+++TY T+I GY + K
Sbjct: 585 GIFPDICIYNVLINMFFREGCVENVLELLREIIKYGLEPDIVTYNTMICGYCSLKIFSKA 644
Query: 396 MEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSL 455
+++++ ++ +PN FT ++DAY K+ D A++ + M G P+ + L+
Sbjct: 645 IKLFEVLKCGRTQPNAITFTILIDAYCKDGRMDDAMLIFSSMLERGPEPNILTYSCLIDG 704
Query: 456 AKTADERNEANELLGNFNHPNNEPGINGLSISVD 489
+ A EL P I SI +D
Sbjct: 705 YFKTENTESAFELYEKMLGDRVSPNIVSYSILID 738
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 92/392 (23%), Positives = 187/392 (47%), Gaps = 41/392 (10%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
+ ++ K+G+ K + ++G P +V +++ G + A F M SG
Sbjct: 211 VFNSFLKRGEVEKGLNFHRALVERGLVPKIVDCNKILKGLCMGNQIGVASDFFDMMVRSG 270
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
P P+ +T+ ++ ++ + + EA ++ ++++ + PD ++ ++I +AG E
Sbjct: 271 PSPNLVTFSTLINVYCKELRLDEAFSLYNLMIEKG---IVPDLVIYSILINGLFRAGKLE 327
Query: 222 KARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSK---IYDQMQRAGLQPDVVSYALLI 278
+ LF++ RGV+ V ++S+M ++ K +Y +M + G+ P+VV+Y++LI
Sbjct: 328 EGNSLFSMALARGVKMDVVIFSSIMDAYVRVGDLGKAIEVYTRMLKEGISPNVVTYSILI 387
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCS 338
N + R EA VF ++L G+ P+ Y+ L+D F S + ++ M R
Sbjct: 388 NGLCRNGRVLEACGVFGQILKQGLEPSVLTYSSLIDGFCKSENLRDGFGLYGIMLRKGHV 447
Query: 339 PDICSYTTMLSAYVNASDMEGAEKFF----------------------RRLK--QDGF-- 372
PD+ + +++ M+ A +FF RLK +DG
Sbjct: 448 PDVVVCSMLINGLSRQGMMDEALRFFFQAVKRGLTLNNYLFNALIDGCFRLKRTRDGLKM 507
Query: 373 ---------VPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGK 423
+P+V+TY L+KG A+ L++ + ++ ++ G P+ I+ T++D + K
Sbjct: 508 YILMGMYKVIPDVVTYTVLVKGLAEQGRLDEALALFFQLLKKGFSPDHIIYCTLIDGFCK 567
Query: 424 NKDFDSAVVWYKEMESCGFPPDQKAKNILLSL 455
+D + + +K M+S G PD N+L+++
Sbjct: 568 KRDPATGLQIFKLMQSNGIFPDICIYNVLINM 599
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 83/300 (27%), Positives = 153/300 (51%), Gaps = 6/300 (2%)
Query: 117 KVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLF 176
K+ M P VV++T L++ GR A A+F ++ G P + Y ++ F
Sbjct: 506 KMYILMGMYKVIPDVVTYTVLVKGLAEQGRLDEALALFFQLLKKGFSPDHIIYCTLIDGF 565
Query: 177 VEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQ 236
+ ++F + + + + PD +++++I M+ + G E +L + + G++
Sbjct: 566 CKKRDPATGLQIFKLM---QSNGIFPDICIYNVLINMFFREGCVENVLELLREIIKYGLE 622
Query: 237 QSTVTYNSLMSFETNYKEVSK---IYDQMQRAGLQPDVVSYALLINAYGKARREEEALAV 293
VTYN+++ + K SK +++ ++ QP+ +++ +LI+AY K R ++A+ +
Sbjct: 623 PDIVTYNTMICGYCSLKIFSKAIKLFEVLKCGRTQPNAITFTILIDAYCKDGRMDDAMLI 682
Query: 294 FEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVN 353
F ML+ G P Y+ L+D + + + A +++ M DR SP+I SY+ ++
Sbjct: 683 FSSMLERGPEPNILTYSCLIDGYFKTENTESAFELYEKMLGDRVSPNIVSYSILIDGLCK 742
Query: 354 ASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTI 413
ME A F+ +P+VI YG LI+GY KV L + M +YD M VNGI P+ +
Sbjct: 743 KGLMEEASLAFQCAIGRHLLPDVIAYGILIRGYCKVGRLAEAMMLYDHMLVNGIMPDDLL 802
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 94/417 (22%), Positives = 189/417 (45%), Gaps = 6/417 (1%)
Query: 86 LRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGG 145
+ ++S N + F LI Y K+ ++A + + M +KG P +V ++ L+ R G
Sbjct: 265 MMVRSGPSPNLVTFSTLINVYCKELRLDEAFSLYNLMIEKGIVPDLVIYSILINGLFRAG 324
Query: 146 RYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQK 205
+ + ++F + G + + + I+ +V +A EV+ +L E S P+
Sbjct: 325 KLEEGNSLFSMALARGVKMDVVIFSSIMDAYVRVGDLGKAIEVYTRMLKEGIS---PNVV 381
Query: 206 MFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLM---SFETNYKEVSKIYDQM 262
+ ++I + G +A +F + ++G++ S +TY+SL+ N ++ +Y M
Sbjct: 382 TYSILINGLCRNGRVLEACGVFGQILKQGLEPSVLTYSSLIDGFCKSENLRDGFGLYGIM 441
Query: 263 QRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMV 322
R G PDVV ++LIN + +EAL F + + G+ + +N L+D
Sbjct: 442 LRKGHVPDVVVCSMLINGLSRQGMMDEALRFFFQAVKRGLTLNNYLFNALIDGCFRLKRT 501
Query: 323 DQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTL 382
++ M + PD+ +YT ++ ++ A F +L + GF P+ I Y TL
Sbjct: 502 RDGLKMYILMGMYKVIPDVVTYTVLVKGLAEQGRLDEALALFFQLLKKGFSPDHIIYCTL 561
Query: 383 IKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGF 442
I G+ K + ++I+ M+ NGI P+ I+ +++ + + ++ + +E+ G
Sbjct: 562 IDGFCKKRDPATGLQIFKLMQSNGIFPDICIYNVLINMFFREGCVENVLELLREIIKYGL 621
Query: 443 PPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGINGLSISVDEEDDDDDDDE 499
PD N ++ + ++A +L +P +I +D D D+
Sbjct: 622 EPDIVTYNTMICGYCSLKIFSKAIKLFEVLKCGRTQPNAITFTILIDAYCKDGRMDD 678
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 86/394 (21%), Positives = 173/394 (43%), Gaps = 35/394 (8%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + + +LI + G +A V + K+G PSV+++++L++ + + ++ ++
Sbjct: 379 NVVTYSILINGLCRNGRVLEACGVFGQILKQGLEPSVLTYSSLIDGFCKSENLRDGFGLY 438
Query: 155 RRMQSSGPRPSALTYQII-------------LKLFVEANK--FKEAEEVFMTLLD----- 194
M G P + ++ L+ F +A K +F L+D
Sbjct: 439 GIMLRKGHVPDVVVCSMLINGLSRQGMMDEALRFFFQAVKRGLTLNNYLFNALIDGCFRL 498
Query: 195 -EEKSPLK-----------PDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTY 242
+ LK PD + +++ + G ++A LF + ++G + Y
Sbjct: 499 KRTRDGLKMYILMGMYKVIPDVVTYTVLVKGLAEQGRLDEALALFFQLLKKGFSPDHIIY 558
Query: 243 NSLMSFETNYKEVS---KIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLD 299
+L+ ++ + +I+ MQ G+ PD+ Y +LIN + + E L + E++
Sbjct: 559 CTLIDGFCKKRDPATGLQIFKLMQSNGIFPDICIYNVLINMFFREGCVENVLELLREIIK 618
Query: 300 AGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEG 359
G+ P YN ++ + + +A +F+ ++ R P+ ++T ++ AY M+
Sbjct: 619 YGLEPDIVTYNTMICGYCSLKIFSKAIKLFEVLKCGRTQPNAITFTILIDAYCKDGRMDD 678
Query: 360 AEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMD 419
A F + + G PN++TY LI GY K N E E+Y+KM + + PN ++ ++D
Sbjct: 679 AMLIFSSMLERGPEPNILTYSCLIDGYFKTENTESAFELYEKMLGDRVSPNIVSYSILID 738
Query: 420 AYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILL 453
K + A + ++ PD A IL+
Sbjct: 739 GLCKKGLMEEASLAFQCAIGRHLLPDVIAYGILI 772
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 77/338 (22%), Positives = 159/338 (47%), Gaps = 13/338 (3%)
Query: 120 SFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEA 179
SF N G PS V ++ L+ Y R G A F M G S +L L +++
Sbjct: 131 SFRNY-GSNPSTV-YSFLLHCYCRNGMVDRAVDTFAWMSKMGVSISHYAASEMLDLLIDS 188
Query: 180 NKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQST 239
++ + ++ E + ++ + + K G EK + ERG+
Sbjct: 189 DR--------IDVILENYEEMCKGLGVYEFVFNSFLKRGEVEKGLNFHRALVERGLVPKI 240
Query: 240 VTYNSLMSFETNYKEV---SKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEE 296
V N ++ ++ S +D M R+G P++V+++ LIN Y K R +EA +++
Sbjct: 241 VDCNKILKGLCMGNQIGVASDFFDMMVRSGPSPNLVTFSTLINVYCKELRLDEAFSLYNL 300
Query: 297 MLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASD 356
M++ G+ P Y+IL++ +G +++ ++F D+ +++++ AYV D
Sbjct: 301 MIEKGIVPDLVIYSILINGLFRAGKLEEGNSLFSMALARGVKMDVVIFSSIMDAYVRVGD 360
Query: 357 MEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTT 416
+ A + + R+ ++G PNV+TY LI G + + + ++ ++ G++P+ +++
Sbjct: 361 LGKAIEVYTRMLKEGISPNVVTYSILINGLCRNGRVLEACGVFGQILKQGLEPSVLTYSS 420
Query: 417 IMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLS 454
++D + K+++ Y M G PD ++L++
Sbjct: 421 LIDGFCKSENLRDGFGLYGIMLRKGHVPDVVVCSMLIN 458
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 76/341 (22%), Positives = 156/341 (45%), Gaps = 21/341 (6%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGR----YKNAEAIFRRM 157
L+ Y + G ++A ++M+K G + S + + +++ R +N E + + +
Sbjct: 146 LLHCYCRNGMVDRAVDTFAWMSKMGVSISHYAASEMLDLLIDSDRIDVILENYEEMCKGL 205
Query: 158 QSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKA 217
Y+ + F++ + ++ L++ P D + M +
Sbjct: 206 G---------VYEFVFNSFLKRGEVEKGLNFHRALVERGLVPKIVDCNKILKGLCMGNQI 256
Query: 218 GGYEKARKLFALMAERGVQQSTVTYNSLMSF---ETNYKEVSKIYDQMQRAGLQPDVVSY 274
G A F +M G + VT+++L++ E E +Y+ M G+ PD+V Y
Sbjct: 257 G---VASDFFDMMVRSGPSPNLVTFSTLINVYCKELRLDEAFSLYNLMIEKGIVPDLVIY 313
Query: 275 ALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRR 334
++LIN +A + EE ++F L GV+ ++ ++DA+ G + +A V+ M +
Sbjct: 314 SILINGLFRAGKLEEGNSLFSMALARGVKMDVVIFSSIMDAYVRVGDLGKAIEVYTRMLK 373
Query: 335 DRCSPDICSYTTMLSAYV-NASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLE 393
+ SP++ +Y+ +++ N +E F + LKQ G P+V+TY +LI G+ K NL
Sbjct: 374 EGISPNVVTYSILINGLCRNGRVLEACGVFGQILKQ-GLEPSVLTYSSLIDGFCKSENLR 432
Query: 394 KMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWY 434
+Y M G P+ + + +++ + D A+ ++
Sbjct: 433 DGFGLYGIMLRKGHVPDVVVCSMLINGLSRQGMMDEALRFF 473
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 55/242 (22%), Positives = 104/242 (42%), Gaps = 6/242 (2%)
Query: 228 ALMAERGVQQSTVTYNSLMSFETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARRE 287
L+ R +T ++ ++ N + + + + + G P V Y+ L++ Y +
Sbjct: 98 VLLRHRMFDPATRVFDRMVGQFGNLEVLGEFHGSFRNYGSNPSTV-YSFLLHCYCRNGMV 156
Query: 288 EEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTM 347
+ A+ F M GV +H A + +LD S +D ++ M + + Y +
Sbjct: 157 DRAVDTFAWMSKMGVSISHYAASEMLDLLIDSDRIDVILENYEEMCKG-----LGVYEFV 211
Query: 348 LSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGI 407
++++ ++E F R L + G VP ++ ++KG N + + +D M +G
Sbjct: 212 FNSFLKRGEVEKGLNFHRALVERGLVPKIVDCNKILKGLCMGNQIGVASDFFDMMVRSGP 271
Query: 408 KPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANE 467
PN F+T+++ Y K D A Y M G PD +IL++ A + E N
Sbjct: 272 SPNLVTFSTLINVYCKELRLDEAFSLYNLMIEKGIVPDLVIYSILINGLFRAGKLEEGNS 331
Query: 468 LL 469
L
Sbjct: 332 LF 333
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 78/166 (46%), Gaps = 7/166 (4%)
Query: 70 LKQLKKWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAP 129
LK K + EVL+ R Q N + F +LI AY K G + A + S M ++G P
Sbjct: 638 LKIFSKAIKLFEVLKCGRTQP----NAITFTILIDAYCKDGRMDDAMLIFSSMLERGPEP 693
Query: 130 SVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVF 189
++++++ L++ Y + ++A ++ +M P+ ++Y I++ + +EA F
Sbjct: 694 NILTYSCLIDGYFKTENTESAFELYEKMLGDRVSPNIVSYSILIDGLCKKGLMEEASLAF 753
Query: 190 MTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGV 235
+ L PD + ++I Y K G +A L+ M G+
Sbjct: 754 QCAIGRH---LLPDVIAYGILIRGYCKVGRLAEAMMLYDHMLVNGI 796
>gi|302753732|ref|XP_002960290.1| hypothetical protein SELMODRAFT_73828 [Selaginella moellendorffii]
gi|300171229|gb|EFJ37829.1| hypothetical protein SELMODRAFT_73828 [Selaginella moellendorffii]
Length = 546
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 110/376 (29%), Positives = 181/376 (48%), Gaps = 10/376 (2%)
Query: 122 MNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANK 181
+ K GYAPS+ ++ +++ R +++ AE + M P T+ ++ + AN+
Sbjct: 16 IEKGGYAPSIFAYNVVLKNVLRARQWELAEGLVLEMVEKDLVPDKFTFSTLISGYGRANR 75
Query: 182 FKEAEEVFMTLLDE-EKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTV 240
++A M L E E +KPD +F +I + K Y KA LF+ + G+ V
Sbjct: 76 LEDA----MGWLQEMEAGGIKPDLVIFSTLIELAGKVKDYSKATSLFSKLKASGIAPDKV 131
Query: 241 TYNSLMSFETN---YKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEM 297
YNS+++ YKE + +M+ AGL PD VSY +LINAY ++++ EA VF EM
Sbjct: 132 IYNSMINLYGKAKFYKEAQGLLAEMKEAGLMPDTVSYTILINAYAESQKYLEAKQVFLEM 191
Query: 298 LDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDR-CSPDICSYTTMLSAYVNASD 356
G++ N+++D + MV A +F M + ++ +Y TM+ Y A
Sbjct: 192 KTKGIQLDVTTCNMMIDVYGKLEMVRDAEELFWSMSKTLGIQQNVVTYNTMIKVYKEAEL 251
Query: 357 MEGAEKFFRRLKQDGFV-PNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFT 415
+ A F ++ G V PNVITY T++ + EK M + KM+ GI+PN ++
Sbjct: 252 LSEAFNVFYYMQNKGGVEPNVITYNTILFLHGLTLQHEKAMRLVRKMQQRGIEPNAVTYS 311
Query: 416 TIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHP 475
T++ YGK +D A +K + GF D+ ++ + + A A LL P
Sbjct: 312 TLISIYGKTGKYDRAAFLFKTLREKGFEMDEILYQSMIVVYERAGLVAHAKRLLEELKQP 371
Query: 476 NNEPGINGLSISVDEE 491
+ P +SI E
Sbjct: 372 DIVPRDTAISILAKAE 387
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 97/364 (26%), Positives = 181/364 (49%), Gaps = 18/364 (4%)
Query: 99 FLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQ 158
F LI GK D++KA + S + G AP V + +++ YG+ YK A+ + M+
Sbjct: 98 FSTLIELAGKVKDYSKATSLFSKLKASGIAPDKVIYNSMINLYGKAKFYKEAQGLLAEMK 157
Query: 159 SSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAG 218
+G P ++Y I++ + E+ K+ EA++VF L+ + ++ D +MMI +Y K
Sbjct: 158 EAGLMPDTVSYTILINAYAESQKYLEAKQVF---LEMKTKGIQLDVTTCNMMIDVYGKLE 214
Query: 219 GYEKARKLFALMAER-GVQQSTVTYNSLMSFETNYKEVSKI-------YDQMQRAGLQPD 270
A +LF M++ G+QQ+ VTYN+++ YKE + Y + G++P+
Sbjct: 215 MVRDAEELFWSMSKTLGIQQNVVTYNTMIKV---YKEAELLSEAFNVFYYMQNKGGVEPN 271
Query: 271 VVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFK 330
V++Y ++ +G + E+A+ + +M G+ P Y+ L+ + +G D+A +FK
Sbjct: 272 VITYNTILFLHGLTLQHEKAMRLVRKMQQRGIEPNAVTYSTLISIYGKTGKYDRAAFLFK 331
Query: 331 CMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVN 390
+R D Y +M+ Y A + A++ LKQ P+++ T I AK
Sbjct: 332 TLREKGFEMDEILYQSMIVVYERAGLVAHAKRLLEELKQ----PDIVPRDTAISILAKAE 387
Query: 391 NLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKN 450
LE+ ++Y + G + +++ + +NK +A+ ++ M GF PD +
Sbjct: 388 KLEEAAKLYWRSHEAGEIKESVTYKSMIQLFVRNKRSKNAIDVFENMRESGFLPDSETTV 447
Query: 451 ILLS 454
+LL+
Sbjct: 448 VLLA 451
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 75/310 (24%), Positives = 157/310 (50%), Gaps = 6/310 (1%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFM-NKKGYAPSVVSHTALMEAYGRGGRYKNAEAI 153
N + + +I Y + ++A V +M NK G P+V+++ ++ +G +++ A +
Sbjct: 235 NVVTYNTMIKVYKEAELLSEAFNVFYYMQNKGGVEPNVITYNTILFLHGLTLQHEKAMRL 294
Query: 154 FRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYM 213
R+MQ G P+A+TY ++ ++ + K+ A +F TL + + D+ ++ MI +
Sbjct: 295 VRKMQQRGIEPNAVTYSTLISIYGKTGKYDRAAFLFKTL---REKGFEMDEILYQSMIVV 351
Query: 214 YKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSKIYDQMQRAGLQPDVVS 273
Y++AG A++L + + + T S+++ +E +K+Y + AG + V+
Sbjct: 352 YERAGLVAHAKRLLEELKQPDIVPRD-TAISILAKAEKLEEAAKLYWRSHEAGEIKESVT 410
Query: 274 YALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMR 333
Y +I + + +R + A+ VFE M ++G P + +LL A+ ++ A ++ MR
Sbjct: 411 YKSMIQLFVRNKRSKNAIDVFENMRESGFLPDSETTVVLLAAYGQLRQLEDAEKLYLDMR 470
Query: 334 RDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLE 393
C+ + + ML Y +A + AE F LK +G + + Y T+I+ Y + + L
Sbjct: 471 ERGCTLEKEVHFQMLKLYGDARKIREAEDMFAALKLEGLDGDEL-YLTMIRIYERASKLN 529
Query: 394 KMMEIYDKMR 403
+ ++ +M+
Sbjct: 530 EASRLFSEMK 539
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 85/378 (22%), Positives = 174/378 (46%), Gaps = 38/378 (10%)
Query: 97 MDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRR 156
+ + +LI AY + + +A++V M KG V + +++ YG+ ++AE +F
Sbjct: 166 VSYTILINAYAESQKYLEAKQVFLEMKTKGIQLDVTTCNMMIDVYGKLEMVRDAEELFWS 225
Query: 157 MQSS-GPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYK 215
M + G + + +TY ++K++ EA EA VF + + K ++P+ ++ +++++
Sbjct: 226 MSKTLGIQQNVVTYNTMIKVYKEAELLSEAFNVFYYM--QNKGGVEPNVITYNTILFLHG 283
Query: 216 KAGGYEKARKLFALMAERGVQQSTVTYNSLMSF------------------ETNYKEVSK 257
+EKA +L M +RG++ + VTY++L+S E ++
Sbjct: 284 LTLQHEKAMRLVRKMQQRGIEPNAVTYSTLISIYGKTGKYDRAAFLFKTLREKGFEMDEI 343
Query: 258 IYDQM----QRAGL------------QPDVVSYALLINAYGKARREEEALAVFEEMLDAG 301
+Y M +RAGL QPD+V I+ KA + EEA ++ +AG
Sbjct: 344 LYQSMIVVYERAGLVAHAKRLLEELKQPDIVPRDTAISILAKAEKLEEAAKLYWRSHEAG 403
Query: 302 VRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAE 361
Y ++ F + A VF+ MR PD + +L+AY +E AE
Sbjct: 404 EIKESVTYKSMIQLFVRNKRSKNAIDVFENMRESGFLPDSETTVVLLAAYGQLRQLEDAE 463
Query: 362 KFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAY 421
K + +++ G + ++K Y + + +++ +++ G+ ++ ++ T++ Y
Sbjct: 464 KLYLDMRERGCTLEKEVHFQMLKLYGDARKIREAEDMFAALKLEGLDGDE-LYLTMIRIY 522
Query: 422 GKNKDFDSAVVWYKEMES 439
+ + A + EM+S
Sbjct: 523 ERASKLNEASRLFSEMKS 540
>gi|357521609|ref|XP_003631093.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355525115|gb|AET05569.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 788
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 100/401 (24%), Positives = 194/401 (48%), Gaps = 6/401 (1%)
Query: 92 WDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAE 151
+ F++ + LI K G A +L M K P++V ++AL++ + G +A
Sbjct: 156 YLFDQFTYGTLINGLSKNGQIKAALHLLQEMEKSSVQPNLVMYSALIDGLCKDGFVSDAL 215
Query: 152 AIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMI 211
+ ++ G A+TY ++ +++E ++ ++ E + PD F+++I
Sbjct: 216 GLCSQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVREN---VDPDDYTFNILI 272
Query: 212 YMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLM---SFETNYKEVSKIYDQMQRAGLQ 268
K G +A+ + A+M++RG + VTYN+LM N E +++++M + GL+
Sbjct: 273 DALCKEGRILEAQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEARELFNRMVKRGLE 332
Query: 269 PDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTV 328
PDV++Y +LI+ Y K + +EA+ +F+E+ + + PT +YN L+D SG + + +
Sbjct: 333 PDVLNYNVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRISHVKKL 392
Query: 329 FKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAK 388
M PD+ +Y ++ A + A + + G PN++TY ++ GY
Sbjct: 393 LDEMHGSAQPPDVVTYNILIDALCKEGRILEALGVLVMMMKKGVKPNIVTYNAMMDGYCL 452
Query: 389 VNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKA 448
NN+ +I+++M +G++P+ + +++ Y K + D A+V +KEM PD +
Sbjct: 453 RNNVNVAKDIFNRMVKSGLEPDILNYNVLINGYCKTEMVDEAIVLFKEMRHKNLIPDIAS 512
Query: 449 KNILLSLAKTADERNEANELLGNFNHPNNEPGINGLSISVD 489
N L+ ELL P + +I +D
Sbjct: 513 YNSLIDGLCNLGRIPHVQELLDEMCDSGQSPDVITYNILLD 553
Score = 161 bits (408), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 106/429 (24%), Positives = 198/429 (46%), Gaps = 37/429 (8%)
Query: 75 KWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSH 134
+W V+++L + ++ D ++ F +LI A K+G +A+ VL+ M+K+G P +V++
Sbjct: 245 RWQEVTQLLTKM-VRENVDPDDYTFNILIDALCKEGRILEAQGVLAMMSKRGEKPDIVTY 303
Query: 135 TALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLD 194
ALME Y A +F RM G P L Y +++ + + EA +F L +
Sbjct: 304 NALMEGYCSRENVHEARELFNRMVKRGLEPDVLNYNVLIDGYCKTKMVDEAMVLFKELCN 363
Query: 195 EEKSPL--------------------------------KPDQKMFHMMIYMYKKAGGYEK 222
+ P PD ++++I K G +
Sbjct: 364 KNLVPTIASYNSLIDGLCNSGRISHVKKLLDEMHGSAQPPDVVTYNILIDALCKEGRILE 423
Query: 223 ARKLFALMAERGVQQSTVTYNSLM---SFETNYKEVSKIYDQMQRAGLQPDVVSYALLIN 279
A + +M ++GV+ + VTYN++M N I+++M ++GL+PD+++Y +LIN
Sbjct: 424 ALGVLVMMMKKGVKPNIVTYNAMMDGYCLRNNVNVAKDIFNRMVKSGLEPDILNYNVLIN 483
Query: 280 AYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSP 339
Y K +EA+ +F+EM + P +YN L+D G + + + M SP
Sbjct: 484 GYCKTEMVDEAIVLFKEMRHKNLIPDIASYNSLIDGLCNLGRIPHVQELLDEMCDSGQSP 543
Query: 340 DICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIY 399
D+ +Y +L A+ + A FR++ + G P+ T ++ K L+ +
Sbjct: 544 DVITYNILLDAFCKTQPFDKAISLFRQIVE-GIWPDFYTNHAIVDNLCKGEKLKMAEDAL 602
Query: 400 DKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTA 459
+ ++G PN +T +++A K+ F A++ +ME PPD I++ +
Sbjct: 603 KHLLMHGCSPNVQTYTILINALCKDGSFGEAMLLLSKMEDNDRPPDAITFEIIIGVLLQR 662
Query: 460 DERNEANEL 468
+E ++A +L
Sbjct: 663 NETDKAEKL 671
Score = 154 bits (390), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 90/347 (25%), Positives = 173/347 (49%), Gaps = 7/347 (2%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
LI G + + ++L+ M ++ P + L++A + GR A+ + M G
Sbjct: 236 LIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNILIDALCKEGRILEAQGVLAMMSKRG 295
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
+P +TY +++ + EA E+F ++ K L+PD ++++I Y K +
Sbjct: 296 EKPDIVTYNALMEGYCSRENVHEARELFNRMV---KRGLEPDVLNYNVLIDGYCKTKMVD 352
Query: 222 KARKLFALMAERGVQQSTVTYNSLMSFETNYKEVS---KIYDQMQRAGLQPDVVSYALLI 278
+A LF + + + + +YNSL+ N +S K+ D+M + PDVV+Y +LI
Sbjct: 353 EAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRISHVKKLLDEMHGSAQPPDVVTYNILI 412
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCS 338
+A K R EAL V M+ GV+P YN ++D + + V+ A+ +F M +
Sbjct: 413 DALCKEGRILEALGVLVMMMKKGVKPNIVTYNAMMDGYCLRNNVNVAKDIFNRMVKSGLE 472
Query: 339 PDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEI 398
PDI +Y +++ Y ++ A F+ ++ +P++ +Y +LI G + + + E+
Sbjct: 473 PDILNYNVLINGYCKTEMVDEAIVLFKEMRHKNLIPDIASYNSLIDGLCNLGRIPHVQEL 532
Query: 399 YDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPD 445
D+M +G P+ + ++DA+ K + FD A+ ++++ G PD
Sbjct: 533 LDEMCDSGQSPDVITYNILLDAFCKTQPFDKAISLFRQIVE-GIWPD 578
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 103/458 (22%), Positives = 180/458 (39%), Gaps = 70/458 (15%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
L+ A + G + A + + + KG +PS+ + T L+ Y A ++ + SG
Sbjct: 61 LLGAIVRMGHYPTAISLFTQLQSKGISPSIATFTILINCYFHQSHTAFAFSLLATILKSG 120
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDE-------------------------- 195
+P+ +T+ I+ F +A + LL +
Sbjct: 121 YQPNLVTFNTIINGFCINGMIFKALDFCQNLLAQGYLFDQFTYGTLINGLSKNGQIKAAL 180
Query: 196 ------EKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFE 249
EKS ++P+ M+ +I K G A L + + ERG+ VTYNSL+
Sbjct: 181 HLLQEMEKSSVQPNLVMYSALIDGLCKDGFVSDALGLCSQIGERGILLDAVTYNSLIDGC 240
Query: 250 TN---YKEVSKIYDQMQRA-----------------------------------GLQPDV 271
+ ++EV+++ +M R G +PD+
Sbjct: 241 CSVGRWQEVTQLLTKMVRENVDPDDYTFNILIDALCKEGRILEAQGVLAMMSKRGEKPDI 300
Query: 272 VSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKC 331
V+Y L+ Y EA +F M+ G+ P YN+L+D + + MVD+A +FK
Sbjct: 301 VTYNALMEGYCSRENVHEARELFNRMVKRGLEPDVLNYNVLIDGYCKTKMVDEAMVLFKE 360
Query: 332 MRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNN 391
+ P I SY +++ N+ + +K + P+V+TY LI K
Sbjct: 361 LCNKNLVPTIASYNSLIDGLCNSGRISHVKKLLDEMHGSAQPPDVVTYNILIDALCKEGR 420
Query: 392 LEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNI 451
+ + + + M G+KPN + +MD Y + + A + M G PD N+
Sbjct: 421 ILEALGVLVMMMKKGVKPNIVTYNAMMDGYCLRNNVNVAKDIFNRMVKSGLEPDILNYNV 480
Query: 452 LLSLAKTADERNEANELLGNFNHPNNEPGINGLSISVD 489
L++ + +EA L H N P I + +D
Sbjct: 481 LINGYCKTEMVDEAIVLFKEMRHKNLIPDIASYNSLID 518
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 70/361 (19%), Positives = 140/361 (38%), Gaps = 73/361 (20%)
Query: 202 PDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMS--FETNYKEVS-KI 258
P +F ++ + G Y A LF + +G+ S T+ L++ F ++ + +
Sbjct: 53 PPTSVFDKLLGAIVRMGHYPTAISLFTQLQSKGISPSIATFTILINCYFHQSHTAFAFSL 112
Query: 259 YDQMQRAGLQPDVV-----------------------------------SYALLINAYGK 283
+ ++G QP++V +Y LIN K
Sbjct: 113 LATILKSGYQPNLVTFNTIINGFCINGMIFKALDFCQNLLAQGYLFDQFTYGTLINGLSK 172
Query: 284 ARREEEALAVFEEMLDAGVRPTHKAYN--------------------------ILLDAFA 317
+ + AL + +EM + V+P Y+ ILLDA
Sbjct: 173 NGQIKAALHLLQEMEKSSVQPNLVMYSALIDGLCKDGFVSDALGLCSQIGERGILLDAVT 232
Query: 318 ISGMVDQARTV---------FKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLK 368
+ ++D +V M R+ PD ++ ++ A + A+ +
Sbjct: 233 YNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNILIDALCKEGRILEAQGVLAMMS 292
Query: 369 QDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFD 428
+ G P+++TY L++GY N+ + E++++M G++P+ + ++D Y K K D
Sbjct: 293 KRGEKPDIVTYNALMEGYCSRENVHEARELFNRMVKRGLEPDVLNYNVLIDGYCKTKMVD 352
Query: 429 SAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGINGLSISV 488
A+V +KE+ + P + N L+ + + +LL + P + +I +
Sbjct: 353 EAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRISHVKKLLDEMHGSAQPPDVVTYNILI 412
Query: 489 D 489
D
Sbjct: 413 D 413
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 36/163 (22%), Positives = 74/163 (45%)
Query: 283 KARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDIC 342
+ R ++A+ F M+ P ++ LL A G A ++F ++ SP I
Sbjct: 32 RFRNVDDAVTCFNRMVRVFPPPPTSVFDKLLGAIVRMGHYPTAISLFTQLQSKGISPSIA 91
Query: 343 SYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKM 402
++T +++ Y + S A + + G+ PN++T+ T+I G+ + K ++ +
Sbjct: 92 TFTILINCYFHQSHTAFAFSLLATILKSGYQPNLVTFNTIINGFCINGMIFKALDFCQNL 151
Query: 403 RVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPD 445
G +Q + T+++ KN +A+ +EME P+
Sbjct: 152 LAQGYLFDQFTYGTLINGLSKNGQIKAALHLLQEMEKSSVQPN 194
>gi|449495714|ref|XP_004159923.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At5g39710-like [Cucumis sativus]
Length = 749
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 113/438 (25%), Positives = 208/438 (47%), Gaps = 9/438 (2%)
Query: 35 MNQIEEVGSAVAVLRSERTRGQPLPKDLVLGTLVRLKQLKKWNVVSEVLEWLRIQSWWDF 94
+N I + S V + +S L + +L ++R KQ K ++E + ++S
Sbjct: 145 VNLINKALSIVNLAKSYGFMPGVLSYNAILDAVIRTKQSVK---IAEGIFKEMVESGVSP 201
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + +LI + G+ M + G P+VV++ +++AY + + A +
Sbjct: 202 NVYTYNILIRGFCTAGNLEMGLXFFGEMERNGCLPNVVTYNTIIDAYCKLRKIGEAFKLL 261
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
R M G P+ ++Y +++ + KE E+ L + K PD+ F+ +I Y
Sbjct: 262 RLMALKGLNPNLISYNVVINGLCREGQMKETSEI---LEEMSKRRYVPDRVTFNTLINGY 318
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSL---MSFETNYKEVSKIYDQMQRAGLQPDV 271
G + +A L A M + G+ + VTY +L M N + DQM+ GL P+
Sbjct: 319 CNVGNFHQALVLHAEMVKNGLSPNVVTYTTLINSMCKAGNLNRAMEFLDQMRDRGLHPNG 378
Query: 272 VSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKC 331
+Y LI+ + + ++A + +EM++ G PT YN L++ I G ++ A + +
Sbjct: 379 RTYTTLIDGFSQQGFLKQAYQIMKEMVENGFTPTIITYNALINGHCILGRMEDASGLLQE 438
Query: 332 MRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNN 391
M PD+ SY+T++S + ++E A + + G P+V TY +LI+G K
Sbjct: 439 MIERGFIPDVVSYSTIISGFCRNQELEKAFQLKVEMVAKGISPDVATYSSLIQGLCKQRR 498
Query: 392 LEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNI 451
L ++ +++ +M G+ P++ +T++++AY D D A+ + EM GF PD N+
Sbjct: 499 LGEVCDLFQEMLSLGLPPDEVTYTSLINAYCIEGDLDKALRLHDEMIQKGFSPDIVTYNV 558
Query: 452 LLSLAKTADERNEANELL 469
L++ EA LL
Sbjct: 559 LINGFNKQSRTKEAKRLL 576
Score = 162 bits (409), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 98/387 (25%), Positives = 183/387 (47%), Gaps = 42/387 (10%)
Query: 99 FLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGR-YKNAEAIFRRM 157
F +++ + + NKA +++ G+ P V+S+ A+++A R + K AE IF+ M
Sbjct: 135 FDLVVKSCARVNLINKALSIVNLAKSYGFMPGVLSYNAILDAVIRTKQSVKIAEGIFKEM 194
Query: 158 QSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKA 217
SG P+ TY I+++ F A + F + E++ P+ ++ +I Y K
Sbjct: 195 VESGVSPNVYTYNILIRGFCTAGNLEMGLXFFGEM---ERNGCLPNVVTYNTIIDAYCKL 251
Query: 218 GGYEKARKLFALMAERGVQQSTVTYNSLM-----------------------------SF 248
+A KL LMA +G+ + ++YN ++ +F
Sbjct: 252 RKIGEAFKLLRLMALKGLNPNLISYNVVINGLCREGQMKETSEILEEMSKRRYVPDRVTF 311
Query: 249 ET---------NYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLD 299
T N+ + ++ +M + GL P+VV+Y LIN+ KA A+ ++M D
Sbjct: 312 NTLINGYCNVGNFHQALVLHAEMVKNGLSPNVVTYTTLINSMCKAGNLNRAMEFLDQMRD 371
Query: 300 AGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEG 359
G+ P + Y L+D F+ G + QA + K M + +P I +Y +++ + ME
Sbjct: 372 RGLHPNGRTYTTLIDGFSQQGFLKQAYQIMKEMVENGFTPTIITYNALINGHCILGRMED 431
Query: 360 AEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMD 419
A + + + GF+P+V++Y T+I G+ + LEK ++ +M GI P+ +++++
Sbjct: 432 ASGLLQEMIERGFIPDVVSYSTIISGFCRNQELEKAFQLKVEMVAKGISPDVATYSSLIQ 491
Query: 420 AYGKNKDFDSAVVWYKEMESCGFPPDQ 446
K + ++EM S G PPD+
Sbjct: 492 GLCKQRRLGEVCDLFQEMLSLGLPPDE 518
Score = 155 bits (391), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 120/457 (26%), Positives = 216/457 (47%), Gaps = 34/457 (7%)
Query: 37 QIEEVGSAVAVLRSERTRG---QPLPKDLVLGTLVRLKQLKKWNVVSEVLEWLRIQSWWD 93
++ ++G A +LR +G + ++V+ L R Q+K+ SE+LE + + +
Sbjct: 250 KLRKIGEAFKLLRLMALKGLNPNLISYNVVINGLCREGQMKE---TSEILEEMSKRRYVP 306
Query: 94 FNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAI 153
+ + F LI Y G+F++A + + M K G +P+VV++T L+ + + G A
Sbjct: 307 -DRVTFNTLINGYCNVGNFHQALVLHAEMVKNGLSPNVVTYTTLINSMCKAGNLNRAMEF 365
Query: 154 FRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYM 213
+M+ G P+ TY ++ F + K+A ++ +++ + P ++ +I
Sbjct: 366 LDQMRDRGLHPNGRTYTTLIDGFSQQGFLKQAYQIMKEMVE---NGFTPTIITYNALING 422
Query: 214 YKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSKIYD---QMQRAGLQPD 270
+ G E A L M ERG V+Y++++S +E+ K + +M G+ PD
Sbjct: 423 HCILGRMEDASGLLQEMIERGFIPDVVSYSTIISGFCRNQELEKAFQLKVEMVAKGISPD 482
Query: 271 VVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFK 330
V +Y+ LI K RR E +F+EML G+ P Y L++A+ I G +D+A +
Sbjct: 483 VATYSSLIQGLCKQRRLGEVCDLFQEMLSLGLPPDEVTYTSLINAYCIEGDLDKALRLHD 542
Query: 331 CMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLI------- 383
M + SPDI +Y +++ + S + A++ +L + VPN ITY TLI
Sbjct: 543 EMIQKGFSPDIVTYNVLINGFNKQSRTKEAKRLLLKLLYEESVPNEITYNTLIDNCNNLE 602
Query: 384 --------KGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYK 435
KG+ + + + + M G K N+ ++ I+ + K + + A YK
Sbjct: 603 FKSALALMKGFCMKGLMNEADRVLESMLQKGYKLNEEVYNVIIHGHSKVGNIEKAYNLYK 662
Query: 436 EMESCGFPPDQKAKNILLSLAKTADERN---EANELL 469
EM GF P +++LAK+ E N+LL
Sbjct: 663 EMLHSGFAPHSVT---IMALAKSLYHEGKEVELNQLL 696
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 92/391 (23%), Positives = 181/391 (46%), Gaps = 13/391 (3%)
Query: 51 ERTRGQPLPKDLVLGTLVRLKQLKKWNVVSEVLEWLRIQSWWDFNE--MDFLMLITAYGK 108
E R LP + T++ K + E + LR+ + N + + ++I +
Sbjct: 228 EMERNGCLPNVVTYNTII--DAYCKLRKIGEAFKLLRLMALKGLNPNLISYNVVINGLCR 285
Query: 109 QGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALT 168
+G + ++L M+K+ Y P V+ L+ Y G + A + M +G P+ +T
Sbjct: 286 EGQMKETSEILEEMSKRRYVPDRVTFNTLINGYCNVGNFHQALVLHAEMVKNGLSPNVVT 345
Query: 169 YQIILKLFVEANKFKEAEEVFMTLLDEEK-SPLKPDQKMFHMMIYMYKKAGGYEKARKLF 227
Y ++ +A A M LD+ + L P+ + + +I + + G ++A ++
Sbjct: 346 YTTLINSMCKAGNLNRA----MEFLDQMRDRGLHPNGRTYTTLIDGFSQQGFLKQAYQIM 401
Query: 228 ALMAERGVQQSTVTYNSLMSFET---NYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKA 284
M E G + +TYN+L++ ++ S + +M G PDVVSY+ +I+ + +
Sbjct: 402 KEMVENGFTPTIITYNALINGHCILGRMEDASGLLQEMIERGFIPDVVSYSTIISGFCRN 461
Query: 285 RREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSY 344
+ E+A + EM+ G+ P Y+ L+ + + +F+ M PD +Y
Sbjct: 462 QELEKAFQLKVEMVAKGISPDVATYSSLIQGLCKQRRLGEVCDLFQEMLSLGLPPDEVTY 521
Query: 345 TTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRV 404
T++++AY D++ A + + Q GF P+++TY LI G+ K + ++ + K+
Sbjct: 522 TSLINAYCIEGDLDKALRLHDEMIQKGFSPDIVTYNVLINGFNKQSRTKEAKRLLLKLLY 581
Query: 405 NGIKPNQTIFTTIMDAYGKNKDFDSAVVWYK 435
PN+ + T++D N +F SA+ K
Sbjct: 582 EESVPNEITYNTLIDN-CNNLEFKSALALMK 611
>gi|302816960|ref|XP_002990157.1| hypothetical protein SELMODRAFT_131102 [Selaginella moellendorffii]
gi|300142012|gb|EFJ08717.1| hypothetical protein SELMODRAFT_131102 [Selaginella moellendorffii]
Length = 760
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 109/404 (26%), Positives = 200/404 (49%), Gaps = 18/404 (4%)
Query: 59 PKDLVLGTLVR-LKQLKKWNVVSEVLEWLRIQ----SWWDFNEMDFLMLITAYGKQGDFN 113
P DL +VR L +W V + +W+ +Q S WD +I++ G+ G +
Sbjct: 84 PDDLPF--IVRELGHSGQWEKVVKSFDWMVLQQNLRSQWDKVTST---IISSLGRLGRSD 138
Query: 114 KAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIIL 173
A+ + G+ +V +++L+ AYGR G+ A IF M+ +P+ + Y ++
Sbjct: 139 WAQLIFDRAVGAGFGNNVFVYSSLICAYGRSGKLAKAVEIFEAMKVVC-KPNLVVYNAVI 197
Query: 174 KLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAER 233
+ + A +F +L++ SP D+ F+ +I +A +E+ ++FA M ER
Sbjct: 198 DACSKGGDYPTALRIFREMLEQGMSP---DRITFNTLISAAGRANRWEECDRIFAEMEER 254
Query: 234 GVQQSTVTYNSLMSFETNYKEV---SKIYDQMQRA-GLQPDVVSYALLINAYGKARREEE 289
G+ + VTYN+L++ ++ + + + M ++ G++P V++Y+ +I+ Y K E
Sbjct: 255 GIARDDVTYNTLIATYCRGGQMHLGAALMETMAKSSGIEPSVITYSTMIDGYAKLGLAHE 314
Query: 290 ALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLS 349
A+A+F+EM + V P YN ++D A G D+A ++ + M + DI +Y +L
Sbjct: 315 AIALFQEMRNQNVEPDGICYNTMVDIHARLGNFDEAHSIRRAMEEAGFAKDIVTYNALLD 374
Query: 350 AYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKP 409
+Y A +KQ G PN++TY LI Y K M ++ ++ G++P
Sbjct: 375 SYGKQGKFREAMSLLEEMKQRGASPNILTYSALIDAYCKHGFHRDAMALFQDVKKAGLQP 434
Query: 410 NQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILL 453
+ +++T++D KN D A+ +EM G P+ N LL
Sbjct: 435 DVVLYSTLVDGCCKNGSPDEALALLEEMADNGIRPNVITYNSLL 478
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 98/406 (24%), Positives = 168/406 (41%), Gaps = 78/406 (19%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
LI AYG+ G KA ++ M K P++V + A+++A +GG Y A IFR M G
Sbjct: 162 LICAYGRSGKLAKAVEIFEAM-KVVCKPNLVVYNAVIDACSKGGDYPTALRIFREMLEQG 220
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFM---------------TLLDE----------- 195
P +T+ ++ AN+++E + +F TL+
Sbjct: 221 MSPDRITFNTLISAAGRANRWEECDRIFAEMEERGIARDDVTYNTLIATYCRGGQMHLGA 280
Query: 196 -------EKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSF 248
+ S ++P + MI Y K G +A LF M + V+ + YN+++
Sbjct: 281 ALMETMAKSSGIEPSVITYSTMIDGYAKLGLAHEAIALFQEMRNQNVEPDGICYNTMVDI 340
Query: 249 ET---NYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPT 305
N+ E I M+ AG D+V+Y L+++YGK + EA+++ EEM G P
Sbjct: 341 HARLGNFDEAHSIRRAMEEAGFAKDIVTYNALLDSYGKQGKFREAMSLLEEMKQRGASPN 400
Query: 306 HKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFR 365
Y+ L+DA+ G A +F+ +++ PD+ Y+T++ + A
Sbjct: 401 ILTYSALIDAYCKHGFHRDAMALFQDVKKAGLQPDVVLYSTLVDGCCKNGSPDEALALLE 460
Query: 366 RLKQDGFVPNVITYGTLIKGYAKV-----NNLEKM------------------------- 395
+ +G PNVITY +L+ Y + N K+
Sbjct: 461 EMADNGIRPNVITYNSLLDAYGRQCLMVRKNFPKLRFFLLPRVTMLLKPSVDYDQQSLVD 520
Query: 396 -----------MEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSA 430
++ +M NG+KPN F++I++A + A
Sbjct: 521 PKQKQALVLAAARVFREMAKNGVKPNVVTFSSILNACSHCASVEDA 566
Score = 112 bits (279), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 79/328 (24%), Positives = 149/328 (45%), Gaps = 50/328 (15%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKK-GYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSS 160
LI Y + G + ++ M K G PSV++++ +++ Y + G A A+F+ M++
Sbjct: 266 LIATYCRGGQMHLGAALMETMAKSSGIEPSVITYSTMIDGYAKLGLAHEAIALFQEMRNQ 325
Query: 161 GPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGY 220
P + Y ++ + F EA + + E++ D ++ ++ Y K G +
Sbjct: 326 NVEPDGICYNTMVDIHARLGNFDEAHSIRRAM---EEAGFAKDIVTYNALLDSYGKQGKF 382
Query: 221 EKARKLFALMAERGVQQSTVTYNSLMSFETNY---KEVSKIYDQMQRAGLQPDVVSYALL 277
+A L M +RG + +TY++L+ + ++ ++ +++AGLQPDVV Y+ L
Sbjct: 383 REAMSLLEEMKQRGASPNILTYSALIDAYCKHGFHRDAMALFQDVKKAGLQPDVVLYSTL 442
Query: 278 INAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFA-------------------- 317
++ K +EALA+ EEM D G+RP YN LLDA+
Sbjct: 443 VDGCCKNGSPDEALALLEEMADNGIRPNVITYNSLLDAYGRQCLMVRKNFPKLRFFLLPR 502
Query: 318 ---------------------ISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASD 356
+V A VF+ M ++ P++ +++++L+A + +
Sbjct: 503 VTMLLKPSVDYDQQSLVDPKQKQALVLAAARVFREMAKNGVKPNVVTFSSILNACSHCAS 562
Query: 357 MEGAEKFFRRLKQ-DGFVPNVITYGTLI 383
+E A ++ DG V V T+G L+
Sbjct: 563 VEDASSLLEAMRVFDGRVYGV-THGLLM 589
Score = 102 bits (253), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 75/289 (25%), Positives = 129/289 (44%), Gaps = 5/289 (1%)
Query: 205 KMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSK---IYDQ 261
K+ +I + G + A+ +F G + Y+SL+ +++K I++
Sbjct: 122 KVTSTIISSLGRLGRSDWAQLIFDRAVGAGFGNNVFVYSSLICAYGRSGKLAKAVEIFEA 181
Query: 262 MQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGM 321
M + +P++V Y +I+A K AL +F EML+ G+ P +N L+ A +
Sbjct: 182 M-KVVCKPNLVVYNAVIDACSKGGDYPTALRIFREMLEQGMSPDRITFNTLISAAGRANR 240
Query: 322 VDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDME-GAEKFFRRLKQDGFVPNVITYG 380
++ +F M + D +Y T+++ Y M GA K G P+VITY
Sbjct: 241 WEECDRIFAEMEERGIARDDVTYNTLIATYCRGGQMHLGAALMETMAKSSGIEPSVITYS 300
Query: 381 TLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESC 440
T+I GYAK+ + + ++ +MR ++P+ + T++D + + +FD A + ME
Sbjct: 301 TMIDGYAKLGLAHEAIALFQEMRNQNVEPDGICYNTMVDIHARLGNFDEAHSIRRAMEEA 360
Query: 441 GFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGINGLSISVD 489
GF D N LL + EA LL P I S +D
Sbjct: 361 GFAKDIVTYNALLDSYGKQGKFREAMSLLEEMKQRGASPNILTYSALID 409
>gi|302821741|ref|XP_002992532.1| hypothetical protein SELMODRAFT_135367 [Selaginella moellendorffii]
gi|300139734|gb|EFJ06470.1| hypothetical protein SELMODRAFT_135367 [Selaginella moellendorffii]
Length = 759
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 109/404 (26%), Positives = 200/404 (49%), Gaps = 18/404 (4%)
Query: 59 PKDLVLGTLVR-LKQLKKWNVVSEVLEWLRIQ----SWWDFNEMDFLMLITAYGKQGDFN 113
P DL +VR L +W V + +W+ +Q S WD +I++ G+ G +
Sbjct: 83 PDDLPF--IVRELGHSGQWEKVVKSFDWMVLQQNLRSQWDKVTST---IISSLGRLGRSD 137
Query: 114 KAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIIL 173
A+ + G+ +V +++L+ AYGR G+ A IF M+ +P+ + Y ++
Sbjct: 138 WAQLIFDRAVGAGFGNNVFVYSSLICAYGRSGKLAKAVEIFEAMKVVC-KPNLVVYNAVI 196
Query: 174 KLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAER 233
+ + A +F +L++ SP D+ F+ +I +A +E+ ++FA M ER
Sbjct: 197 DACSKGGDYPTALRIFREMLEQGMSP---DRITFNTLISAAGRANRWEECDRIFAEMEER 253
Query: 234 GVQQSTVTYNSLMSFETNYKEV---SKIYDQMQRA-GLQPDVVSYALLINAYGKARREEE 289
G+ + VTYN+L++ ++ + + + M ++ G++P V++Y+ +I+ Y K E
Sbjct: 254 GIARDDVTYNTLIATYCRGGQMHLGAALMETMAKSSGIEPSVITYSTMIDGYAKLGLAHE 313
Query: 290 ALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLS 349
A+A+F+EM + V P YN ++D A G D+A ++ + M + DI +Y +L
Sbjct: 314 AIALFQEMRNQNVEPDGICYNTMVDIHARLGNFDEAHSIRRAMEEAGFAKDIVTYNALLD 373
Query: 350 AYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKP 409
+Y A +KQ G PN++TY LI Y K M ++ ++ G++P
Sbjct: 374 SYGKQGKFREAMSLLEEMKQRGASPNILTYSALIDAYCKHGFHRDAMALFQDVKKAGLQP 433
Query: 410 NQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILL 453
+ +++T++D KN D A+ +EM G P+ N LL
Sbjct: 434 DVVLYSTLVDGCCKNGSPDEALALLEEMADNGIRPNVITYNSLL 477
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 99/406 (24%), Positives = 168/406 (41%), Gaps = 78/406 (19%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
LI AYG+ G KA ++ M K P++V + A+++A +GG Y A IFR M G
Sbjct: 161 LICAYGRSGKLAKAVEIFEAM-KVVCKPNLVVYNAVIDACSKGGDYPTALRIFREMLEQG 219
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFM---------------TLLDE----------- 195
P +T+ ++ AN+++E + +F TL+
Sbjct: 220 MSPDRITFNTLISAAGRANRWEECDRIFAEMEERGIARDDVTYNTLIATYCRGGQMHLGA 279
Query: 196 -------EKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSF 248
+ S ++P + MI Y K G +A LF M + V+ + YN+++
Sbjct: 280 ALMETMAKSSGIEPSVITYSTMIDGYAKLGLAHEAIALFQEMRNQNVEPDGICYNTMVDI 339
Query: 249 ET---NYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPT 305
N+ E I M+ AG D+V+Y L+++YGK + EA+++ EEM G P
Sbjct: 340 HARLGNFDEAHSIRRAMEEAGFAKDIVTYNALLDSYGKQGKFREAMSLLEEMKQRGASPN 399
Query: 306 HKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFR 365
Y+ L+DA+ G A +F+ +++ PD+ Y+T++ + A
Sbjct: 400 ILTYSALIDAYCKHGFHRDAMALFQDVKKAGLQPDVVLYSTLVDGCCKNGSPDEALALLE 459
Query: 366 RLKQDGFVPNVITYGTLIKGYAK-------------------VNNLEK------------ 394
+ +G PNVITY +L+ Y + V L K
Sbjct: 460 EMADNGIRPNVITYNSLLDAYGRQCLMVRKTFPKLRFFLLPRVTMLLKPSMQDDQQSLVD 519
Query: 395 ----------MMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSA 430
++ +M NG+KPN F++I++A + A
Sbjct: 520 PKQKQALVLAAARVFREMAKNGVKPNVVTFSSILNACSHCASVEDA 565
Score = 112 bits (279), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 79/328 (24%), Positives = 149/328 (45%), Gaps = 50/328 (15%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKK-GYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSS 160
LI Y + G + ++ M K G PSV++++ +++ Y + G A A+F+ M++
Sbjct: 265 LIATYCRGGQMHLGAALMETMAKSSGIEPSVITYSTMIDGYAKLGLAHEAIALFQEMRNQ 324
Query: 161 GPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGY 220
P + Y ++ + F EA + + E++ D ++ ++ Y K G +
Sbjct: 325 NVEPDGICYNTMVDIHARLGNFDEAHSIRRAM---EEAGFAKDIVTYNALLDSYGKQGKF 381
Query: 221 EKARKLFALMAERGVQQSTVTYNSLMSFETNY---KEVSKIYDQMQRAGLQPDVVSYALL 277
+A L M +RG + +TY++L+ + ++ ++ +++AGLQPDVV Y+ L
Sbjct: 382 REAMSLLEEMKQRGASPNILTYSALIDAYCKHGFHRDAMALFQDVKKAGLQPDVVLYSTL 441
Query: 278 INAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFA-------------------- 317
++ K +EALA+ EEM D G+RP YN LLDA+
Sbjct: 442 VDGCCKNGSPDEALALLEEMADNGIRPNVITYNSLLDAYGRQCLMVRKTFPKLRFFLLPR 501
Query: 318 ---------------------ISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASD 356
+V A VF+ M ++ P++ +++++L+A + +
Sbjct: 502 VTMLLKPSMQDDQQSLVDPKQKQALVLAAARVFREMAKNGVKPNVVTFSSILNACSHCAS 561
Query: 357 MEGAEKFFRRLKQ-DGFVPNVITYGTLI 383
+E A ++ DG V V T+G L+
Sbjct: 562 VEDASNLLEAMRVFDGRVYGV-THGLLM 588
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 75/289 (25%), Positives = 129/289 (44%), Gaps = 5/289 (1%)
Query: 205 KMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSK---IYDQ 261
K+ +I + G + A+ +F G + Y+SL+ +++K I++
Sbjct: 121 KVTSTIISSLGRLGRSDWAQLIFDRAVGAGFGNNVFVYSSLICAYGRSGKLAKAVEIFEA 180
Query: 262 MQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGM 321
M + +P++V Y +I+A K AL +F EML+ G+ P +N L+ A +
Sbjct: 181 M-KVVCKPNLVVYNAVIDACSKGGDYPTALRIFREMLEQGMSPDRITFNTLISAAGRANR 239
Query: 322 VDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDME-GAEKFFRRLKQDGFVPNVITYG 380
++ +F M + D +Y T+++ Y M GA K G P+VITY
Sbjct: 240 WEECDRIFAEMEERGIARDDVTYNTLIATYCRGGQMHLGAALMETMAKSSGIEPSVITYS 299
Query: 381 TLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESC 440
T+I GYAK+ + + ++ +MR ++P+ + T++D + + +FD A + ME
Sbjct: 300 TMIDGYAKLGLAHEAIALFQEMRNQNVEPDGICYNTMVDIHARLGNFDEAHSIRRAMEEA 359
Query: 441 GFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGINGLSISVD 489
GF D N LL + EA LL P I S +D
Sbjct: 360 GFAKDIVTYNALLDSYGKQGKFREAMSLLEEMKQRGASPNILTYSALID 408
>gi|302768008|ref|XP_002967424.1| hypothetical protein SELMODRAFT_231012 [Selaginella moellendorffii]
gi|300165415|gb|EFJ32023.1| hypothetical protein SELMODRAFT_231012 [Selaginella moellendorffii]
Length = 546
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 110/376 (29%), Positives = 181/376 (48%), Gaps = 10/376 (2%)
Query: 122 MNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANK 181
+ K GYAPS+ ++ +++ R +++ AE + M P T+ ++ + AN+
Sbjct: 16 IEKGGYAPSIFAYNVVLKNVLRARQWELAEGLVLEMVEKDLVPDKFTFSTLISGYGRANR 75
Query: 182 FKEAEEVFMTLLDE-EKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTV 240
++A M L E E +KPD +F +I + K Y KA LF+ + G+ V
Sbjct: 76 LEDA----MGWLQEMEAGGIKPDLVIFSTLIELAGKVKDYSKATSLFSKLKASGIAPDKV 131
Query: 241 TYNSLMSFETN---YKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEM 297
YNS+++ YKE + +M+ AGL PD VSY +LINAY ++++ EA VF EM
Sbjct: 132 IYNSMINLYGKAKFYKEAQGLLAEMKEAGLMPDTVSYTILINAYAESQKYLEAKQVFLEM 191
Query: 298 LDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDR-CSPDICSYTTMLSAYVNASD 356
G++ N+++D + MV A +F M + ++ +Y TM+ Y A
Sbjct: 192 KTKGIQLDVTTCNMMIDVYGKLEMVRDAEELFWSMSKTLGIQQNVVTYNTMIKVYKEAEL 251
Query: 357 MEGAEKFFRRLKQDGFV-PNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFT 415
+ A F ++ G V PNVITY T++ + EK M + KM+ GI+PN ++
Sbjct: 252 LSEAFNVFYYMQNKGGVEPNVITYNTILFLHGLTLQHEKAMRLVRKMQQRGIEPNAVTYS 311
Query: 416 TIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHP 475
T++ YGK +D A +K + GF D+ ++ + + A A LL P
Sbjct: 312 TLISIYGKTGKYDRAAFLFKTLREKGFEMDEILYQSMIVVYERAGLVAHAKRLLEELKQP 371
Query: 476 NNEPGINGLSISVDEE 491
+ P +SI E
Sbjct: 372 DIVPRDTAISILAKAE 387
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 97/364 (26%), Positives = 181/364 (49%), Gaps = 18/364 (4%)
Query: 99 FLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQ 158
F LI GK D++KA + S + G AP V + +++ YG+ YK A+ + M+
Sbjct: 98 FSTLIELAGKVKDYSKATSLFSKLKASGIAPDKVIYNSMINLYGKAKFYKEAQGLLAEMK 157
Query: 159 SSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAG 218
+G P ++Y I++ + E+ K+ EA++VF L+ + ++ D +MMI +Y K
Sbjct: 158 EAGLMPDTVSYTILINAYAESQKYLEAKQVF---LEMKTKGIQLDVTTCNMMIDVYGKLE 214
Query: 219 GYEKARKLFALMAER-GVQQSTVTYNSLMSFETNYKEVSKI-------YDQMQRAGLQPD 270
A +LF M++ G+QQ+ VTYN+++ YKE + Y + G++P+
Sbjct: 215 MVRDAEELFWSMSKTLGIQQNVVTYNTMIKV---YKEAELLSEAFNVFYYMQNKGGVEPN 271
Query: 271 VVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFK 330
V++Y ++ +G + E+A+ + +M G+ P Y+ L+ + +G D+A +FK
Sbjct: 272 VITYNTILFLHGLTLQHEKAMRLVRKMQQRGIEPNAVTYSTLISIYGKTGKYDRAAFLFK 331
Query: 331 CMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVN 390
+R D Y +M+ Y A + A++ LKQ P+++ T I AK
Sbjct: 332 TLREKGFEMDEILYQSMIVVYERAGLVAHAKRLLEELKQ----PDIVPRDTAISILAKAE 387
Query: 391 NLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKN 450
LE+ ++Y + G + +++ + +NK +A+ ++ M GF PD +
Sbjct: 388 KLEEAAKLYWRSHEAGEIKESVTYKSMIQLFMRNKRSKNAIDVFENMRESGFLPDSETTV 447
Query: 451 ILLS 454
+LL+
Sbjct: 448 VLLA 451
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 75/310 (24%), Positives = 157/310 (50%), Gaps = 6/310 (1%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFM-NKKGYAPSVVSHTALMEAYGRGGRYKNAEAI 153
N + + +I Y + ++A V +M NK G P+V+++ ++ +G +++ A +
Sbjct: 235 NVVTYNTMIKVYKEAELLSEAFNVFYYMQNKGGVEPNVITYNTILFLHGLTLQHEKAMRL 294
Query: 154 FRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYM 213
R+MQ G P+A+TY ++ ++ + K+ A +F TL + + D+ ++ MI +
Sbjct: 295 VRKMQQRGIEPNAVTYSTLISIYGKTGKYDRAAFLFKTL---REKGFEMDEILYQSMIVV 351
Query: 214 YKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSKIYDQMQRAGLQPDVVS 273
Y++AG A++L + + + T S+++ +E +K+Y + AG + V+
Sbjct: 352 YERAGLVAHAKRLLEELKQPDIVPRD-TAISILAKAEKLEEAAKLYWRSHEAGEIKESVT 410
Query: 274 YALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMR 333
Y +I + + +R + A+ VFE M ++G P + +LL A+ ++ A ++ MR
Sbjct: 411 YKSMIQLFMRNKRSKNAIDVFENMRESGFLPDSETTVVLLAAYGQLRQLEDAEKLYLDMR 470
Query: 334 RDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLE 393
C+ + + ML Y +A + AE F LK +G + + Y T+I+ Y + + L
Sbjct: 471 ERGCTLEKEVHFQMLKLYGDARKIREAEDMFAALKLEGLDGDEL-YLTMIRIYERASKLN 529
Query: 394 KMMEIYDKMR 403
+ ++ +M+
Sbjct: 530 EASRLFSEMK 539
Score = 102 bits (254), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 85/378 (22%), Positives = 174/378 (46%), Gaps = 38/378 (10%)
Query: 97 MDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRR 156
+ + +LI AY + + +A++V M KG V + +++ YG+ ++AE +F
Sbjct: 166 VSYTILINAYAESQKYLEAKQVFLEMKTKGIQLDVTTCNMMIDVYGKLEMVRDAEELFWS 225
Query: 157 MQSS-GPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYK 215
M + G + + +TY ++K++ EA EA VF + + K ++P+ ++ +++++
Sbjct: 226 MSKTLGIQQNVVTYNTMIKVYKEAELLSEAFNVFYYM--QNKGGVEPNVITYNTILFLHG 283
Query: 216 KAGGYEKARKLFALMAERGVQQSTVTYNSLMSF------------------ETNYKEVSK 257
+EKA +L M +RG++ + VTY++L+S E ++
Sbjct: 284 LTLQHEKAMRLVRKMQQRGIEPNAVTYSTLISIYGKTGKYDRAAFLFKTLREKGFEMDEI 343
Query: 258 IYDQM----QRAGL------------QPDVVSYALLINAYGKARREEEALAVFEEMLDAG 301
+Y M +RAGL QPD+V I+ KA + EEA ++ +AG
Sbjct: 344 LYQSMIVVYERAGLVAHAKRLLEELKQPDIVPRDTAISILAKAEKLEEAAKLYWRSHEAG 403
Query: 302 VRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAE 361
Y ++ F + A VF+ MR PD + +L+AY +E AE
Sbjct: 404 EIKESVTYKSMIQLFMRNKRSKNAIDVFENMRESGFLPDSETTVVLLAAYGQLRQLEDAE 463
Query: 362 KFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAY 421
K + +++ G + ++K Y + + +++ +++ G+ ++ ++ T++ Y
Sbjct: 464 KLYLDMRERGCTLEKEVHFQMLKLYGDARKIREAEDMFAALKLEGLDGDE-LYLTMIRIY 522
Query: 422 GKNKDFDSAVVWYKEMES 439
+ + A + EM+S
Sbjct: 523 ERASKLNEASRLFSEMKS 540
>gi|2335106|gb|AAC02776.1| putative salt-inducible protein [Arabidopsis thaliana]
Length = 810
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 100/374 (26%), Positives = 176/374 (47%), Gaps = 18/374 (4%)
Query: 87 RIQSW-WDFNEMDFLM-------------LITAYGKQGDFNKAEKVLSFMNKKGYAPSVV 132
R W W N MD ++ LI A G G++ +A +V M G P +V
Sbjct: 190 RAGQWRWAMNLMDDMLRAAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLV 249
Query: 133 SHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTL 192
+H ++ AY G +Y A + F M+ + RP T+ II+ + + +A ++F ++
Sbjct: 250 THNIVLSAYKSGRQYSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSM 309
Query: 193 LDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLM---SFE 249
E+++ +PD F ++++Y G E R +F M G++ + V+YN+LM +
Sbjct: 310 -REKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVH 368
Query: 250 TNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAY 309
+ +++ G+ PDVVSY L+N+YG++R+ +A VF M +P Y
Sbjct: 369 GMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTY 428
Query: 310 NILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQ 369
N L+DA+ +G + +A +F+ M +D P++ S T+L+A + + +
Sbjct: 429 NALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQS 488
Query: 370 DGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDS 429
G N Y + I Y LEK + +Y MR +K + FT ++ + +
Sbjct: 489 RGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRMSKYPE 548
Query: 430 AVVWYKEMESCGFP 443
A+ + KEME P
Sbjct: 549 AISYLKEMEDLSIP 562
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 96/349 (27%), Positives = 175/349 (50%), Gaps = 8/349 (2%)
Query: 82 VLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAY 141
V +W++IQ + + M+I + + ++A + M K P ++ AL+ A+
Sbjct: 129 VFKWMKIQKNYCARNDIYNMMIRLHARHNWVDQARGLFFEMQKWSCKPDAETYDALINAH 188
Query: 142 GRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLK 201
GR G+++ A + M + PS TY ++ + ++EA EV + D + +
Sbjct: 189 GRAGQWRWAMNLMDDMLRAAIAPSRSTYNNLINACGSSGNWREALEVCKKMTD---NGVG 245
Query: 202 PDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSKIYDQ 261
PD ++++ YK Y KA F LM V+ T T+N ++ + + S+ D
Sbjct: 246 PDLVTHNIVLSAYKSGRQYSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDL 305
Query: 262 M-----QRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAF 316
+RA +PDVV++ +++ Y E AVFE M+ G++P +YN L+ A+
Sbjct: 306 FNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAY 365
Query: 317 AISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNV 376
A+ GM A +V ++++ PD+ SYT +L++Y + A++ F ++++ PNV
Sbjct: 366 AVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNV 425
Query: 377 ITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNK 425
+TY LI Y L + +EI+ +M +GIKPN T++ A ++K
Sbjct: 426 VTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSK 474
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 106/431 (24%), Positives = 198/431 (45%), Gaps = 21/431 (4%)
Query: 48 LRSERTRGQPLPKDLVLGTLV-RLKQLKKWNVVSEVLEWLRIQSWWD-FNEMDFLMLITA 105
+R E R Q KD + +V RL L +W V VL SW F +F +LI
Sbjct: 65 IRVENDRFQ---KDWSVSEVVDRLMALNRWEEVDGVL-----NSWVGRFARKNFPVLIRE 116
Query: 106 YGKQGDFNKAEKVLSFMN-KKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRP 164
++G V +M +K Y + ++ + R A +F MQ +P
Sbjct: 117 LSRRGCIELCVNVFKWMKIQKNYCARNDIYNMMIRLHARHNWVDQARGLFFEMQKWSCKP 176
Query: 165 SALTYQIILKLFVEANKFKEAEEVFMTLLDEE-KSPLKPDQKMFHMMIYMYKKAGGYEKA 223
A TY ++ A +++ A M L+D+ ++ + P + ++ +I +G + +A
Sbjct: 177 DAETYDALINAHGRAGQWRWA----MNLMDDMLRAAIAPSRSTYNNLINACGSSGNWREA 232
Query: 224 RKLFALMAERGVQQSTVTYNSLMSFETNYKEVSKI---YDQMQRAGLQPDVVSYALLINA 280
++ M + GV VT+N ++S + ++ SK ++ M+ A ++PD ++ ++I
Sbjct: 233 LEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYSKALSYFELMKGAKVRPDTTTFNIIIYC 292
Query: 281 YGKARREEEALAVFEEMLD--AGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCS 338
K + +AL +F M + A RP + ++ +++ G ++ R VF+ M +
Sbjct: 293 LSKLGQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLK 352
Query: 339 PDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEI 398
P+I SY ++ AY A +KQ+G +P+V++Y L+ Y + K E+
Sbjct: 353 PNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEV 412
Query: 399 YDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKT 458
+ MR KPN + ++DAYG N AV +++ME G P+ + LL+
Sbjct: 413 FLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSR 472
Query: 459 ADERNEANELL 469
+ ++ + +L
Sbjct: 473 SKKKVNVDTVL 483
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 85/341 (24%), Positives = 157/341 (46%), Gaps = 20/341 (5%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + + L+ AY G A VL + + G P VVS+T L+ +YGR + A+ +F
Sbjct: 354 NIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVF 413
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
M+ +P+ +TY ++ + EA E+F + E+ +KP+ ++
Sbjct: 414 LMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQM---EQDGIKPNVVSVCTLLAAC 470
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSK---IYDQMQRAGLQPDV 271
++ + + RG+ +T YNS + N E+ K +Y M++ ++ D
Sbjct: 471 SRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADS 530
Query: 272 VSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKC 331
V++ +LI+ + + EA++ +EM D + T + G V +A ++F
Sbjct: 531 VTFTILISGSCRMSKYPEAISYLKEMEDLSIPLTKE------------GQVTEAESIFNQ 578
Query: 332 MRRDRCSPDICSYTTMLSAYVNASDMEG-AEKFFRRLKQDGFVPNVITYGTLIKGYAKVN 390
M+ C PD+ +YT+ML AY NAS+ G A + F ++ +G P+ I L++ + K
Sbjct: 579 MKMAGCEPDVIAYTSMLHAY-NASEKWGKACELFLEMEANGIEPDSIACSALMRAFNKGG 637
Query: 391 NLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAV 431
+ + D MR I +F I A +++ A+
Sbjct: 638 QPSNVFVLMDLMREKEIPFTGAVFFEIFSACNTLQEWKRAI 678
Score = 108 bits (269), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 89/384 (23%), Positives = 157/384 (40%), Gaps = 64/384 (16%)
Query: 97 MDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRR 156
+ + L+ +YG+ KA++V M K+ P+VV++ AL++AYG G A IFR+
Sbjct: 391 VSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQ 450
Query: 157 MQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKK 216
M+ G +P+ ++ + L ++ K+ V L + + + ++ I Y
Sbjct: 451 MEQDGIKPNVVS---VCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYIN 507
Query: 217 AGGYEKARKLFALMAERGVQQSTVTYNSLMSF--------------------------ET 250
A EKA L+ M ++ V+ +VT+ L+S E
Sbjct: 508 AAELEKAIALYQSMRKKKVKADSVTFTILISGSCRMSKYPEAISYLKEMEDLSIPLTKEG 567
Query: 251 NYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYN 310
E I++QM+ AG +PDV++Y +++AY + + +A +F EM G+ P A +
Sbjct: 568 QVTEAESIFNQMKMAGCEPDVIAYTSMLHAYNASEKWGKACELFLEMEANGIEPDSIACS 627
Query: 311 ILLDAFAISGMVDQARTVFKCMRR--------------DRC------------------- 337
L+ AF G + MR C
Sbjct: 628 ALMRAFNKGGQPSNVFVLMDLMREKEIPFTGAVFFEIFSACNTLQEWKRAIDLIQMMDPY 687
Query: 338 --SPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKM 395
S I ML + + +E K F ++ G N+ TY L++ V N K
Sbjct: 688 LPSLSIGLTNQMLHLFGKSGKVEAMMKLFYKIIASGVGINLKTYAILLEHLLAVGNWRKY 747
Query: 396 MEIYDKMRVNGIKPNQTIFTTIMD 419
+E+ + M GI+P+ ++ I+
Sbjct: 748 IEVLEWMSGAGIQPSNQMYRDIIS 771
Score = 98.6 bits (244), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 72/318 (22%), Positives = 138/318 (43%), Gaps = 43/318 (13%)
Query: 169 YQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFA 228
Y ++++L N +A +F + +K KPD + + +I + +AG + A L
Sbjct: 146 YNMMIRLHARHNWVDQARGLFFEM---QKWSCKPDAETYDALINAHGRAGQWRWAMNLMD 202
Query: 229 LMAERGVQQSTVTYNSLMSF---ETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKAR 285
M + S TYN+L++ N++E ++ +M G+ PD+V++ ++++AY R
Sbjct: 203 DMLRAAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGR 262
Query: 286 REEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDR--CSPDICS 343
+ +AL+ FE M A VRP +NI++ + G QA +F MR R C PD
Sbjct: 263 QYSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPD--- 319
Query: 344 YTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMR 403
V+T+ +++ Y+ +E +++ M
Sbjct: 320 --------------------------------VVTFTSIMHLYSVKGEIENCRAVFEAMV 347
Query: 404 VNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERN 463
G+KPN + +M AY + +A+ +++ G PD + LL+ + +
Sbjct: 348 AEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPG 407
Query: 464 EANELLGNFNHPNNEPGI 481
+A E+ +P +
Sbjct: 408 KAKEVFLMMRKERRKPNV 425
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 46/212 (21%), Positives = 91/212 (42%), Gaps = 47/212 (22%)
Query: 108 KQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSAL 167
K+G +AE + + M G P V+++T+++ AY ++ A +F M+++G P ++
Sbjct: 565 KEGQVTEAESIFNQMKMAGCEPDVIAYTSMLHAYNASEKWGKACELFLEMEANGIEPDSI 624
Query: 168 TYQIILKLFVEANKFKEAEEVF--MTLLDEEKSPLK------------------------ 201
+++ F NK + VF M L+ E++ P
Sbjct: 625 ACSALMRAF---NKGGQPSNVFVLMDLMREKEIPFTGAVFFEIFSACNTLQEWKRAIDLI 681
Query: 202 -------PDQK--MFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFET-- 250
P + + M++++ K+G E KLF + GV + TY L+
Sbjct: 682 QMMDPYLPSLSIGLTNQMLHLFGKSGKVEAMMKLFYKIIASGVGINLKTYAILLEHLLAV 741
Query: 251 -NYKEVSKIYDQMQRAGLQP------DVVSYA 275
N+++ ++ + M AG+QP D++S+
Sbjct: 742 GNWRKYIEVLEWMSGAGIQPSNQMYRDIISFG 773
>gi|356540307|ref|XP_003538631.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g02860-like [Glycine max]
Length = 804
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 119/433 (27%), Positives = 196/433 (45%), Gaps = 23/433 (5%)
Query: 56 QPLPKDLVLGTLVRLKQLKKWNVVSEVLEWLRIQSWWD--FNEMDFLMLITAYGKQGDFN 113
P P +LG + L K ++ V W+R + F+ ++I GK G +
Sbjct: 116 HPHPASDILGIIKALGFSNKCDLALAVFHWVRTNNSNTNLFSSSAIPVIIKILGKAGRVS 175
Query: 114 KAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIIL 173
A +L + G V ++T L+ AY GRY++A +F +MQ G P+ +TY ++L
Sbjct: 176 SAASLLLALQNDGVHIDVYAYTCLINAYSSSGRYRDAVNLFNKMQQDGCNPTLITYNVVL 235
Query: 174 KLFVEANKFKEAEEVFMTLLDEEKS-PLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAE 232
++ K L++ +S + PD ++ +I ++ YE+A LF M
Sbjct: 236 NVY---GKMGMPWSNVTALVEAMRSRGVAPDLYTYNTLISCCRRGSLYEEAVHLFQQMKL 292
Query: 233 RGVQQSTVTYNSLMSF---ETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEE 289
G VTYN+L+ +E K+ +M+ G P V+Y LI+AY K EE
Sbjct: 293 EGFTPDKVTYNALLDVFGKSRRPQEAMKVLQEMEANGFSPTSVTYNSLISAYAKGGLLEE 352
Query: 290 ALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLS 349
AL + +M+ G++P Y LL F +G D A VF MR C P+IC++ ++
Sbjct: 353 ALDLKTQMVHKGIKPDVFTYTTLLSGFEKAGKDDFAIQVFLEMRAVGCKPNICTFNALIK 412
Query: 350 AYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKP 409
+ N K F +K P+++T+ TL+ + + ++ I+ +M+ G
Sbjct: 413 MHGNRGKFAEMMKVFDDIKLCNCSPDIVTWNTLLAVFGQNGMDSQVSGIFKEMKRAGFVA 472
Query: 410 NQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLS--------------L 455
+ F T++ AY + FD A+ YK M G PD N +L+ L
Sbjct: 473 ERDTFNTLISAYSRCGSFDQAMAVYKSMLEAGVVPDLSTYNAVLAALARGGLWEQSEKVL 532
Query: 456 AKTADERNEANEL 468
A+ D R + NEL
Sbjct: 533 AEMEDGRCKPNEL 545
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 103/371 (27%), Positives = 181/371 (48%), Gaps = 6/371 (1%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
L+ +GK +A KVL M G++P+ V++ +L+ AY +GG + A + +M G
Sbjct: 305 LLDVFGKSRRPQEAMKVLQEMEANGFSPTSVTYNSLISAYAKGGLLEEALDLKTQMVHKG 364
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
+P TY +L F +A K A +VF L+ KP+ F+ +I M+ G +
Sbjct: 365 IKPDVFTYTTLLSGFEKAGKDDFAIQVF---LEMRAVGCKPNICTFNALIKMHGNRGKFA 421
Query: 222 KARKLFALMAERGVQQSTVTYNSLMS-FETNY--KEVSKIYDQMQRAGLQPDVVSYALLI 278
+ K+F + VT+N+L++ F N +VS I+ +M+RAG + ++ LI
Sbjct: 422 EMMKVFDDIKLCNCSPDIVTWNTLLAVFGQNGMDSQVSGIFKEMKRAGFVAERDTFNTLI 481
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCS 338
+AY + ++A+AV++ ML+AGV P YN +L A A G+ +Q+ V M RC
Sbjct: 482 SAYSRCGSFDQAMAVYKSMLEAGVVPDLSTYNAVLAALARGGLWEQSEKVLAEMEDGRCK 541
Query: 339 PDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEI 398
P+ SY+++L AY N ++E F + + + TL+ +K + L +
Sbjct: 542 PNELSYSSLLHAYANGKEIERMNAFAEEIYSGSVETHAVLLKTLVLVNSKSDLLIETERA 601
Query: 399 YDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKT 458
+ ++R GI P+ T ++ YG+ + A M F P N L+ +
Sbjct: 602 FLELRRRGISPDITTLNAMLSIYGRKQMVAKAHEILNFMHETRFTPSLTTYNSLMYMYSR 661
Query: 459 ADERNEANELL 469
++ ++ E+L
Sbjct: 662 SENFQKSEEIL 672
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 99/451 (21%), Positives = 193/451 (42%), Gaps = 72/451 (15%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
LI+AY K G +A + + M KG P V ++T L+ + + G+ A +F M++ G
Sbjct: 340 LISAYAKGGLLEEALDLKTQMVHKGIKPDVFTYTTLLSGFEKAGKDDFAIQVFLEMRAVG 399
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVF---------------MTLL--------DEEKS 198
+P+ T+ ++K+ KF E +VF TLL D + S
Sbjct: 400 CKPNICTFNALIKMHGNRGKFAEMMKVFDDIKLCNCSPDIVTWNTLLAVFGQNGMDSQVS 459
Query: 199 PLKPDQK---------MFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFE 249
+ + K F+ +I Y + G +++A ++ M E GV TYN++++
Sbjct: 460 GIFKEMKRAGFVAERDTFNTLISAYSRCGSFDQAMAVYKSMLEAGVVPDLSTYNAVLAAL 519
Query: 250 TN---YKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDA------ 300
+++ K+ +M+ +P+ +SY+ L++AY + E A EE+
Sbjct: 520 ARGGLWEQSEKVLAEMEDGRCKPNELSYSSLLHAYANGKEIERMNAFAEEIYSGSVETHA 579
Query: 301 -----------------------------GVRPTHKAYNILLDAFAISGMVDQARTVFKC 331
G+ P N +L + MV +A +
Sbjct: 580 VLLKTLVLVNSKSDLLIETERAFLELRRRGISPDITTLNAMLSIYGRKQMVAKAHEILNF 639
Query: 332 MRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNN 391
M R +P + +Y +++ Y + + + +E+ R + + G P+ I+Y T+I Y +
Sbjct: 640 MHETRFTPSLTTYNSLMYMYSRSENFQKSEEILREVLEKGMKPDRISYNTVIYAYCRNGR 699
Query: 392 LEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNI 451
+++ I+ +M+ + + P+ + T + Y + F A+ + M G PDQ N
Sbjct: 700 MKEASRIFSEMKDSALVPDVVTYNTFIATYAADSMFAEAIDVVRYMIKQGCKPDQNTYNS 759
Query: 452 LLSLAKTADERNEANELLGNFNHPNNEPGIN 482
++ D+R+EAN + N + N +P ++
Sbjct: 760 IVDWYCKLDQRHEANSFVKNLS--NLDPHVS 788
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 82/329 (24%), Positives = 147/329 (44%), Gaps = 5/329 (1%)
Query: 157 MQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKK 216
+ S P P++ II K +NK A VF + + ++I + K
Sbjct: 112 LLSDHPHPASDILGII-KALGFSNKCDLALAVFHWVRTNNSNTNLFSSSAIPVIIKILGK 170
Query: 217 AGGYEKARKLFALMAERGVQQSTVTYNSLM---SFETNYKEVSKIYDQMQRAGLQPDVVS 273
AG A L + GV Y L+ S Y++ ++++MQ+ G P +++
Sbjct: 171 AGRVSSAASLLLALQNDGVHIDVYAYTCLINAYSSSGRYRDAVNLFNKMQQDGCNPTLIT 230
Query: 274 YALLINAYGKARRE-EEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCM 332
Y +++N YGK A+ E M GV P YN L+ + ++A +F+ M
Sbjct: 231 YNVVLNVYGKMGMPWSNVTALVEAMRSRGVAPDLYTYNTLISCCRRGSLYEEAVHLFQQM 290
Query: 333 RRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNL 392
+ + +PD +Y +L + + + A K + ++ +GF P +TY +LI YAK L
Sbjct: 291 KLEGFTPDKVTYNALLDVFGKSRRPQEAMKVLQEMEANGFSPTSVTYNSLISAYAKGGLL 350
Query: 393 EKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNIL 452
E+ +++ +M GIKP+ +TT++ + K D A+ + EM + G P+ N L
Sbjct: 351 EEALDLKTQMVHKGIKPDVFTYTTLLSGFEKAGKDDFAIQVFLEMRAVGCKPNICTFNAL 410
Query: 453 LSLAKTADERNEANELLGNFNHPNNEPGI 481
+ + + E ++ + N P I
Sbjct: 411 IKMHGNRGKFAEMMKVFDDIKLCNCSPDI 439
>gi|242092012|ref|XP_002436496.1| hypothetical protein SORBIDRAFT_10g003720 [Sorghum bicolor]
gi|241914719|gb|EER87863.1| hypothetical protein SORBIDRAFT_10g003720 [Sorghum bicolor]
Length = 698
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 103/390 (26%), Positives = 197/390 (50%), Gaps = 8/390 (2%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + +L+ A +G +A VL M G P+ V++ L+ A+ R G AE +
Sbjct: 156 NVYTYNILVRALCGRGHRKEALSVLRDMRGAGCDPNAVTYNTLVAAFCRAGEVDRAERLV 215
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
M+ G +P+ +T+ ++ +A + ++A +VF ++ E L PD ++ ++ Y
Sbjct: 216 DMMREGGLKPNLVTFNSVVNGICKAGRMEDARKVFDEMVKEG---LAPDGVSYNTLVGGY 272
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSL---MSFETNYKEVSKIYDQMQRAGLQPDV 271
K G +A +FA M +G+ VT+ SL M N + + +M+ GLQ +
Sbjct: 273 CKVGCSHEALSVFAEMTRKGIMPDVVTFTSLIHVMCKAGNLERAVGLVREMRERGLQMNE 332
Query: 272 VSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKC 331
+++ LI+ + K ++AL EM ++P+ YN L++ + + G +D+AR + +
Sbjct: 333 ITFTALIDGFCKKGFLDDALLAVREMRQCRIQPSVVCYNALINGYCMVGRMDEARELVRE 392
Query: 332 MRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNN 391
M PD+ +Y+T+LSAY D A + +++ ++G +P+ ITY +LI+ +
Sbjct: 393 MEAKGVKPDVVTYSTILSAYCKNGDTHSAFQLNQQMLENGVLPDAITYSSLIRVLCEEKR 452
Query: 392 LEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNI 451
L ++ M G++P++ +T+++D + K + + A+ + EM G PD ++
Sbjct: 453 LGDAHVLFKNMISLGLQPDEVTYTSLIDGHCKEGNVERALSLHDEMVKAGVLPDVVTYSV 512
Query: 452 LLS-LAKTADERNEANELLGNFNHPNNEPG 480
L++ L+K+A + EA LL H P
Sbjct: 513 LINGLSKSARTK-EAQRLLFKLYHEEPVPA 541
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 96/336 (28%), Positives = 166/336 (49%), Gaps = 8/336 (2%)
Query: 115 AEKVLSFMNKKGYAPSVVSHTALMEAY-GRGGRYKNAEAIFRRMQSSGPRPSALTYQIIL 173
A + M G AP+V ++ L+ A GRG R K A ++ R M+ +G P+A+TY ++
Sbjct: 141 ARRFFDSMLSDGVAPNVYTYNILVRALCGRGHR-KEALSVLRDMRGAGCDPNAVTYNTLV 199
Query: 174 KLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAER 233
F A + AE + + + LKP+ F+ ++ KAG E ARK+F M +
Sbjct: 200 AAFCRAGEVDRAERLVDMM---REGGLKPNLVTFNSVVNGICKAGRMEDARKVFDEMVKE 256
Query: 234 GVQQSTVTYNSLMSFETNY---KEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEA 290
G+ V+YN+L+ E ++ +M R G+ PDVV++ LI+ KA E A
Sbjct: 257 GLAPDGVSYNTLVGGYCKVGCSHEALSVFAEMTRKGIMPDVVTFTSLIHVMCKAGNLERA 316
Query: 291 LAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSA 350
+ + EM + G++ + L+D F G +D A + MR+ R P + Y +++
Sbjct: 317 VGLVREMRERGLQMNEITFTALIDGFCKKGFLDDALLAVREMRQCRIQPSVVCYNALING 376
Query: 351 YVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPN 410
Y M+ A + R ++ G P+V+TY T++ Y K + ++ +M NG+ P+
Sbjct: 377 YCMVGRMDEARELVREMEAKGVKPDVVTYSTILSAYCKNGDTHSAFQLNQQMLENGVLPD 436
Query: 411 QTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQ 446
+++++ + K A V +K M S G PD+
Sbjct: 437 AITYSSLIRVLCEEKRLGDAHVLFKNMISLGLQPDE 472
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 70/250 (28%), Positives = 123/250 (49%), Gaps = 3/250 (1%)
Query: 223 ARKLFALMAERGVQQSTVTYNSL---MSFETNYKEVSKIYDQMQRAGLQPDVVSYALLIN 279
AR+ F M GV + TYN L + + KE + M+ AG P+ V+Y L+
Sbjct: 141 ARRFFDSMLSDGVAPNVYTYNILVRALCGRGHRKEALSVLRDMRGAGCDPNAVTYNTLVA 200
Query: 280 AYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSP 339
A+ +A + A + + M + G++P +N +++ +G ++ AR VF M ++ +P
Sbjct: 201 AFCRAGEVDRAERLVDMMREGGLKPNLVTFNSVVNGICKAGRMEDARKVFDEMVKEGLAP 260
Query: 340 DICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIY 399
D SY T++ Y A F + + G +P+V+T+ +LI K NLE+ + +
Sbjct: 261 DGVSYNTLVGGYCKVGCSHEALSVFAEMTRKGIMPDVVTFTSLIHVMCKAGNLERAVGLV 320
Query: 400 DKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTA 459
+MR G++ N+ FT ++D + K D A++ +EM C P N L++
Sbjct: 321 REMRERGLQMNEITFTALIDGFCKKGFLDDALLAVREMRQCRIQPSVVCYNALINGYCMV 380
Query: 460 DERNEANELL 469
+EA EL+
Sbjct: 381 GRMDEARELV 390
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 77/365 (21%), Positives = 171/365 (46%), Gaps = 21/365 (5%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
L+ Y K G ++A V + M +KG P VV+ T+L+ + G + A + R M+ G
Sbjct: 268 LVGGYCKVGCSHEALSVFAEMTRKGIMPDVVTFTSLIHVMCKAGNLERAVGLVREMRERG 327
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
+ + +T+ ++ F + +A + + + + ++P ++ +I Y G +
Sbjct: 328 LQMNEITFTALIDGFCKKGFLDDA---LLAVREMRQCRIQPSVVCYNALINGYCMVGRMD 384
Query: 222 KARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSKIYD---QMQRAGLQPDVVSYALLI 278
+AR+L M +GV+ VTY++++S + + QM G+ PD ++Y+ LI
Sbjct: 385 EARELVREMEAKGVKPDVVTYSTILSAYCKNGDTHSAFQLNQQMLENGVLPDAITYSSLI 444
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCS 338
+ +R +A +F+ M+ G++P Y L+D G V++A ++ M +
Sbjct: 445 RVLCEEKRLGDAHVLFKNMISLGLQPDEVTYTSLIDGHCKEGNVERALSLHDEMVKAGVL 504
Query: 339 PDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYG---------------TLI 383
PD+ +Y+ +++ ++ + A++ +L + VP I Y L+
Sbjct: 505 PDVVTYSVLINGLSKSARTKEAQRLLFKLYHEEPVPANIKYDALMRCCRNAELKSVLALL 564
Query: 384 KGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFP 443
KG+ + + ++Y + + ++++ ++ + + + A+ ++K+M CGF
Sbjct: 565 KGFCMKGLMNEADKVYQSILDRNWNLDGSVYSVLIHGHCREGNVMKALSFHKQMLQCGFA 624
Query: 444 PDQKA 448
P+ +
Sbjct: 625 PNSTS 629
Score = 115 bits (287), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 103/400 (25%), Positives = 185/400 (46%), Gaps = 30/400 (7%)
Query: 10 MQKRRKV--EVFKDAADEAGKKNWRRLMNQIEEVGSAVAVLR--SERTRGQPLPKDLVLG 65
M+ RKV E+ K+ G ++ L+ +VG + L +E TR +P +
Sbjct: 243 MEDARKVFDEMVKEGLAPDGV-SYNTLVGGYCKVGCSHEALSVFAEMTRKGIMPDVVTFT 301
Query: 66 TLVRLKQLKKWNVVSEV--LEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMN 123
+L+ + K N+ V + +R + NE+ F LI + K+G + A + M
Sbjct: 302 SLIHV-MCKAGNLERAVGLVREMR-ERGLQMNEITFTALIDGFCKKGFLDDALLAVREMR 359
Query: 124 KKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFK 183
+ PSVV + AL+ Y GR A + R M++ G +P +TY IL + +
Sbjct: 360 QCRIQPSVVCYNALINGYCMVGRMDEARELVREMEAKGVKPDVVTYSTILSAYCKNGDTH 419
Query: 184 EAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYN 243
A ++ +L+ + + PD + +I + + A LF M G+Q VTY
Sbjct: 420 SAFQLNQQMLE---NGVLPDAITYSSLIRVLCEEKRLGDAHVLFKNMISLGLQPDEVTYT 476
Query: 244 SLM---SFETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVF-----E 295
SL+ E N + ++D+M +AG+ PDVV+Y++LIN K+ R +EA + E
Sbjct: 477 SLIDGHCKEGNVERALSLHDEMVKAGVLPDVVTYSVLINGLSKSARTKEAQRLLFKLYHE 536
Query: 296 EMLDAGVR----------PTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYT 345
E + A ++ K+ LL F + G++++A V++ + + D Y+
Sbjct: 537 EPVPANIKYDALMRCCRNAELKSVLALLKGFCMKGLMNEADKVYQSILDRNWNLDGSVYS 596
Query: 346 TMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKG 385
++ + ++ A F +++ Q GF PN + +LI+G
Sbjct: 597 VLIHGHCREGNVMKALSFHKQMLQCGFAPNSTSTISLIRG 636
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 66/327 (20%), Positives = 131/327 (40%), Gaps = 56/327 (17%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
LI Y G ++A +++ M KG P VV+++ ++ AY + G +A + ++M +G
Sbjct: 373 LINGYCMVGRMDEARELVREMEAKGVKPDVVTYSTILSAYCKNGDTHSAFQLNQQMLENG 432
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
P A+TY ++++ E + +A +F ++ L+PD+ + +I + K G E
Sbjct: 433 VLPDAITYSSLIRVLCEEKRLGDAHVLFKNMISLG---LQPDEVTYTSLIDGHCKEGNVE 489
Query: 222 KARKLFALMAERGVQQSTVTYNSL---MSFETNYKEVSKI---------------YDQMQ 263
+A L M + GV VTY+ L +S KE ++ YD +
Sbjct: 490 RALSLHDEMVKAGVLPDVVTYSVLINGLSKSARTKEAQRLLFKLYHEEPVPANIKYDALM 549
Query: 264 RAGLQPDVVS-----------------------------------YALLINAYGKARREE 288
R ++ S Y++LI+ + +
Sbjct: 550 RCCRNAELKSVLALLKGFCMKGLMNEADKVYQSILDRNWNLDGSVYSVLIHGHCREGNVM 609
Query: 289 EALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTML 348
+AL+ ++ML G P + L+ GMV +A V + + D + ++
Sbjct: 610 KALSFHKQMLQCGFAPNSTSTISLIRGLFEKGMVVEADQVIQQLLNCCSLADAEASKALI 669
Query: 349 SAYVNASDMEGAEKFFRRLKQDGFVPN 375
+ +++ + +DG +P+
Sbjct: 670 DLNLKEGNVDAVLDVLHGMARDGLLPS 696
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 51/108 (47%), Gaps = 1/108 (0%)
Query: 338 SPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMME 397
+P + +Y +L A +AS + A +FF + DG PNV TY L++ + ++ +
Sbjct: 120 APSVLAYNAVLLALSDAS-LPSARRFFDSMLSDGVAPNVYTYNILVRALCGRGHRKEALS 178
Query: 398 IYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPD 445
+ MR G PN + T++ A+ + + D A M G P+
Sbjct: 179 VLRDMRGAGCDPNAVTYNTLVAAFCRAGEVDRAERLVDMMREGGLKPN 226
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 65/302 (21%), Positives = 118/302 (39%), Gaps = 58/302 (19%)
Query: 58 LPKDLVLGTLVRL----KQLKKWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFN 113
LP + +L+R+ K+L +V+ + + L +Q +E+ + LI + K+G+
Sbjct: 434 LPDAITYSSLIRVLCEEKRLGDAHVLFKNMISLGLQP----DEVTYTSLIDGHCKEGNVE 489
Query: 114 KAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQ--- 170
+A + M K G P VV+++ L+ + R K A+ + ++ P P+ + Y
Sbjct: 490 RALSLHDEMVKAGVLPDVVTYSVLINGLSKSARTKEAQRLLFKLYHEEPVPANIKYDALM 549
Query: 171 ------------IILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAG 218
+LK F EA++V+ ++LD D ++ ++I+ + + G
Sbjct: 550 RCCRNAELKSVLALLKGFCMKGLMNEADKVYQSILDRN---WNLDGSVYSVLIHGHCREG 606
Query: 219 GYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSKIYDQMQRAGLQPDVVSYALLI 278
KA +SF + QM + G P+ S LI
Sbjct: 607 NVMKA----------------------LSF----------HKQMLQCGFAPNSTSTISLI 634
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCS 338
+ EA V +++L+ +A L+D G VD V M RD
Sbjct: 635 RGLFEKGMVVEADQVIQQLLNCCSLADAEASKALIDLNLKEGNVDAVLDVLHGMARDGLL 694
Query: 339 PD 340
P
Sbjct: 695 PS 696
>gi|15221674|ref|NP_176496.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169918|sp|Q9CAN5.1|PPR98_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g63080, mitochondrial; Flags: Precursor
gi|12323262|gb|AAG51614.1|AC010795_18 unknown protein; 41955-40111 [Arabidopsis thaliana]
gi|332195930|gb|AEE34051.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 614
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 107/441 (24%), Positives = 206/441 (46%), Gaps = 37/441 (8%)
Query: 48 LRSERTRGQPLPKDLVLGTLVR-LKQLKKWNVVSEVLEWLRIQSWWDFNEMDFLMLITAY 106
L E + +P P + L+ + ++KK+++V E + I N + ++I
Sbjct: 52 LFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGV-SHNLYTYNIMINCL 110
Query: 107 GKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSA 166
++ + A +L M K GY PS+V+ +L+ + G R A A+ +M G +P
Sbjct: 111 CRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDT 170
Query: 167 LTYQIILKLFVEANKFKEA-------------------------------EEVFMTLLDE 195
+T+ ++ + NK EA ++ + LL++
Sbjct: 171 VTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNK 230
Query: 196 -EKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNY-- 252
EK ++ D ++ +I K + A LF M +G++ TY+SL+S NY
Sbjct: 231 MEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGR 290
Query: 253 -KEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNI 311
+ S++ M + P+VV++ LI+A+ K + EA +F+EM+ + P YN
Sbjct: 291 WSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNS 350
Query: 312 LLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDG 371
L++ F + +D+A+ +F M C PD+ +Y T+++ + A + + FR + + G
Sbjct: 351 LINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRG 410
Query: 372 FVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAV 431
V N +TY TLI G+ + ++ + ++ +M +G+ PN + T++D KN + A+
Sbjct: 411 LVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAM 470
Query: 432 VWYKEMESCGFPPDQKAKNIL 452
V ++ ++ PD NI+
Sbjct: 471 VVFEYLQKSKMEPDIYTYNIM 491
Score = 149 bits (375), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 103/403 (25%), Positives = 194/403 (48%), Gaps = 26/403 (6%)
Query: 46 AVLRSERTRGQPLPKDLVLGTLVRLKQLKKWNVVSEVLEWLRIQSWWDFNEMDFLMLITA 105
AV+ RG+P DL L L +++K + ++V+ + + I +
Sbjct: 210 AVINGLCKRGEP---DLALNLL---NKMEKGKIEADVVIYSTV--------------IDS 249
Query: 106 YGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPS 165
K + A + + M+ KG P V ++++L+ GR+ +A + M P+
Sbjct: 250 LCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPN 309
Query: 166 ALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARK 225
+T+ ++ F + K EAE++F ++ + + P+ ++ +I + ++A++
Sbjct: 310 VVTFNSLIDAFAKEGKLIEAEKLFDEMI---QRSIDPNIVTYNSLINGFCMHDRLDEAQQ 366
Query: 226 LFALMAERGVQQSTVTYNSLMSFETNYKEVS---KIYDQMQRAGLQPDVVSYALLINAYG 282
+F LM + VTYN+L++ K+V +++ M R GL + V+Y LI+ +
Sbjct: 367 IFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFF 426
Query: 283 KARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDIC 342
+A + A VF++M+ GV P YN LLD +G +++A VF+ +++ + PDI
Sbjct: 427 QASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIY 486
Query: 343 SYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKM 402
+Y M A +E F L G P+VI Y T+I G+ K E+ ++ KM
Sbjct: 487 TYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKM 546
Query: 403 RVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPD 445
+ +G P+ + T++ A+ ++ D ++ KEM SC F D
Sbjct: 547 KEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGD 589
Score = 105 bits (261), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 88/398 (22%), Positives = 164/398 (41%), Gaps = 76/398 (19%)
Query: 129 PSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEV 188
PS+V + L+ A + ++ + +M+ G + TY I++ ++ A +
Sbjct: 63 PSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYNIMINCLCRRSQLSFALAI 122
Query: 189 FMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMS- 247
++ K P + ++ + +A L M E G Q TVT+ +L+
Sbjct: 123 LGKMM---KLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHG 179
Query: 248 -FETN-YKEVSKIYDQMQRAGLQPDVVSYALLIN-------------------------- 279
F+ N E + ++M G QPD+V+Y +IN
Sbjct: 180 LFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEAD 239
Query: 280 ---------AYGKARREEEALAVFEEMLDAGVRP---THKA------------------- 308
+ K R ++AL +F EM + G+RP T+ +
Sbjct: 240 VVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLS 299
Query: 309 -------------YNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNAS 355
+N L+DAFA G + +A +F M + P+I +Y ++++ +
Sbjct: 300 DMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHD 359
Query: 356 DMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFT 415
++ A++ F + +P+V+TY TLI G+ K + ME++ M G+ N +T
Sbjct: 360 RLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYT 419
Query: 416 TIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILL 453
T++ + + D D+A + +K+M S G P+ N LL
Sbjct: 420 TLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLL 457
Score = 95.1 bits (235), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 73/322 (22%), Positives = 131/322 (40%), Gaps = 10/322 (3%)
Query: 153 IFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMF--HMM 210
+F M S P PS + + +L + KF + E+ L ++ ++M
Sbjct: 52 LFGEMVKSRPFPSIVEFSKLLSAIAKMKKFD-----LVISFGEKMEILGVSHNLYTYNIM 106
Query: 211 IYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSK---IYDQMQRAGL 267
I + A + M + G S VT NSL++ + +S+ + DQM G
Sbjct: 107 INCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGY 166
Query: 268 QPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQART 327
QPD V++ L++ + + EA+A+ E M+ G +P Y +++ G D A
Sbjct: 167 QPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALN 226
Query: 328 VFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYA 387
+ M + + D+ Y+T++ + ++ A F + G P+V TY +LI
Sbjct: 227 LLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLC 286
Query: 388 KVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQK 447
+ M I PN F +++DA+ K A + EM P+
Sbjct: 287 NYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIV 346
Query: 448 AKNILLSLAKTADERNEANELL 469
N L++ D +EA ++
Sbjct: 347 TYNSLINGFCMHDRLDEAQQIF 368
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 61/264 (23%), Positives = 120/264 (45%), Gaps = 3/264 (1%)
Query: 221 EKARKLFALMAERGVQQSTVTYNSLMSFETNYKE---VSKIYDQMQRAGLQPDVVSYALL 277
++A LF M + S V ++ L+S K+ V ++M+ G+ ++ +Y ++
Sbjct: 47 DEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYNIM 106
Query: 278 INAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRC 337
IN + + ALA+ +M+ G P+ N LL+ F + +A + M
Sbjct: 107 INCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGY 166
Query: 338 SPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMME 397
PD ++TT++ + A R+ G P+++TYG +I G K + +
Sbjct: 167 QPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALN 226
Query: 398 IYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAK 457
+ +KM I+ + I++T++D+ K + D A+ + EM++ G PD + L+S
Sbjct: 227 LLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLC 286
Query: 458 TADERNEANELLGNFNHPNNEPGI 481
++A+ LL + P +
Sbjct: 287 NYGRWSDASRLLSDMLERKINPNV 310
Score = 45.8 bits (107), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 32/146 (21%), Positives = 60/146 (41%), Gaps = 3/146 (2%)
Query: 322 VDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGT 381
+D+A +F M + R P I ++ +LSA + F +++ G N+ TY
Sbjct: 46 LDEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYNI 105
Query: 382 LIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCG 441
+I + + L + I KM G P+ ++++ + AV +M G
Sbjct: 106 MINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMG 165
Query: 442 FPPDQKAKNILLSLAKTADERNEANE 467
+ PD +L + N+A+E
Sbjct: 166 YQPDTVT---FTTLVHGLFQHNKASE 188
>gi|449520325|ref|XP_004167184.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
mitochondrial-like [Cucumis sativus]
Length = 605
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 106/374 (28%), Positives = 180/374 (48%), Gaps = 6/374 (1%)
Query: 129 PSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEV 188
P+V+++ +++ + GR A+ +F M++ G PS ++Y ++ F A K++E++ +
Sbjct: 213 PNVITYNIIVDGLCKVGREDEAKQLFEEMKTQGMIPSIISYNSLIHGFCCAGKWEESKRL 272
Query: 189 FMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLM-- 246
+LD+ L+PD F+++I K G +A+KL +M E G+ VTYNSL+
Sbjct: 273 LDEMLDQG---LQPDMVTFNVLIDTLCKEGKVIEAKKLLGVMIESGIVPDLVTYNSLIEG 329
Query: 247 -SFETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPT 305
+ +++ M G +PDV+SY +LIN Y K + EEA+ ++ EML G RP
Sbjct: 330 FCMVGDLNSARELFVSMPSKGCEPDVISYNVLINGYSKTLKVEEAMKLYNEMLLVGKRPN 389
Query: 306 HKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFR 365
Y+ LL ++G VD A+ +F M+ + + +Y L + A K F
Sbjct: 390 VITYDSLLKGIFLAGKVDDAKKLFSVMKAHGIAENSYTYGIFLDGLCKNDCLFEAMKLFT 449
Query: 366 RLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNK 425
LK F + LI G K LE E+++K+ G +PN +T ++ + +
Sbjct: 450 ELKSSNFKLEIENLNCLIDGLCKAGKLETAWELFEKLSNEGHEPNVVTYTIMIHGFCREG 509
Query: 426 DFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGINGLS 485
D A V ++ME+ G PD N L+ +++ E +LL + P S
Sbjct: 510 QVDKANVLIQKMEANGCTPDIITYNTLMRGFYESNKLEEVVQLLHRMAQKDVSPDAITCS 569
Query: 486 ISVDEEDDDDDDDE 499
I VD D+ E
Sbjct: 570 IVVDMLSKDEKYQE 583
Score = 158 bits (399), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 97/371 (26%), Positives = 185/371 (49%), Gaps = 6/371 (1%)
Query: 124 KKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFK 183
++GY+P++V++ L++ R A +F RMQ G P +TY ++K
Sbjct: 132 RRGYSPNIVTYNTLIKGLCMEHRISEATRLFLRMQKLGCTPDVVTYGTLIKGLCGTGNIN 191
Query: 184 EAEEVFMTLLDE---EKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTV 240
A ++ +L++ + KP+ +++++ K G ++A++LF M +G+ S +
Sbjct: 192 IALKLHQEMLNDISRYEINCKPNVITYNIIVDGLCKVGREDEAKQLFEEMKTQGMIPSII 251
Query: 241 TYNSLM---SFETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEM 297
+YNSL+ ++E ++ D+M GLQPD+V++ +LI+ K + EA + M
Sbjct: 252 SYNSLIHGFCCAGKWEESKRLLDEMLDQGLQPDMVTFNVLIDTLCKEGKVIEAKKLLGVM 311
Query: 298 LDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDM 357
+++G+ P YN L++ F + G ++ AR +F M C PD+ SY +++ Y +
Sbjct: 312 IESGIVPDLVTYNSLIEGFCMVGDLNSARELFVSMPSKGCEPDVISYNVLINGYSKTLKV 371
Query: 358 EGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTI 417
E A K + + G PNVITY +L+KG ++ +++ M+ +GI N +
Sbjct: 372 EEAMKLYNEMLLVGKRPNVITYDSLLKGIFLAGKVDDAKKLFSVMKAHGIAENSYTYGIF 431
Query: 418 MDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNN 477
+D KN A+ + E++S F + + N L+ A + A EL ++ +
Sbjct: 432 LDGLCKNDCLFEAMKLFTELKSSNFKLEIENLNCLIDGLCKAGKLETAWELFEKLSNEGH 491
Query: 478 EPGINGLSISV 488
EP + +I +
Sbjct: 492 EPNVVTYTIMI 502
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 71/295 (24%), Positives = 148/295 (50%), Gaps = 6/295 (2%)
Query: 97 MDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRR 156
+ F +LI K+G +A+K+L M + G P +V++ +L+E + G +A +F
Sbjct: 286 VTFNVLIDTLCKEGKVIEAKKLLGVMIESGIVPDLVTYNSLIEGFCMVGDLNSARELFVS 345
Query: 157 MQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKK 216
M S G P ++Y +++ + + K +EA +++ +L K +P+ + ++
Sbjct: 346 MPSKGCEPDVISYNVLINGYSKTLKVEEAMKLYNEMLLVGK---RPNVITYDSLLKGIFL 402
Query: 217 AGGYEKARKLFALMAERGVQQSTVTYNSLM---SFETNYKEVSKIYDQMQRAGLQPDVVS 273
AG + A+KLF++M G+ +++ TY + E K++ +++ + + ++ +
Sbjct: 403 AGKVDDAKKLFSVMKAHGIAENSYTYGIFLDGLCKNDCLFEAMKLFTELKSSNFKLEIEN 462
Query: 274 YALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMR 333
LI+ KA + E A +FE++ + G P Y I++ F G VD+A + + M
Sbjct: 463 LNCLIDGLCKAGKLETAWELFEKLSNEGHEPNVVTYTIMIHGFCREGQVDKANVLIQKME 522
Query: 334 RDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAK 388
+ C+PDI +Y T++ + ++ +E + R+ Q P+ IT ++ +K
Sbjct: 523 ANGCTPDIITYNTLMRGFYESNKLEEVVQLLHRMAQKDVSPDAITCSIVVDMLSK 577
Score = 114 bits (286), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 89/372 (23%), Positives = 156/372 (41%), Gaps = 18/372 (4%)
Query: 120 SFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAI--FRRMQSSGPRPSALTYQIILKLFV 177
S PS A + + G A+ F M S P PS ++ +L
Sbjct: 21 SLFTHSSAIPSPNPQIAFFLRHCKTGNVTATHALHFFHLMMRSTPTPSLSSFNHLLSGLA 80
Query: 178 EANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQ 237
K K +VF S L D+ ++++ + FA + RG
Sbjct: 81 ---KIKHYSQVFSLYNQMRLSGLSSDRCTLNILLNCLCNVNRLREGFAAFAGILRRGYSP 137
Query: 238 STVTYNSL---MSFETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVF 294
+ VTYN+L + E E ++++ +MQ+ G PDVV+Y LI AL +
Sbjct: 138 NIVTYNTLIKGLCMEHRISEATRLFLRMQKLGCTPDVVTYGTLIKGLCGTGNINIALKLH 197
Query: 295 EEMLD------AGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTML 348
+EML+ +P YNI++D G D+A+ +F+ M+ P I SY +++
Sbjct: 198 QEMLNDISRYEINCKPNVITYNIIVDGLCKVGREDEAKQLFEEMKTQGMIPSIISYNSLI 257
Query: 349 SAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIK 408
+ A E +++ + G P+++T+ LI K + + ++ M +GI
Sbjct: 258 HGFCCAGKWEESKRLLDEMLDQGLQPDMVTFNVLIDTLCKEGKVIEAKKLLGVMIESGIV 317
Query: 409 PNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEA--- 465
P+ + ++++ + D +SA + M S G PD + N+L++ + EA
Sbjct: 318 PDLVTYNSLIEGFCMVGDLNSARELFVSMPSKGCEPDVISYNVLINGYSKTLKVEEAMKL 377
Query: 466 -NELLGNFNHPN 476
NE+L PN
Sbjct: 378 YNEMLLVGKRPN 389
Score = 44.3 bits (103), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 32/176 (18%), Positives = 72/176 (40%), Gaps = 38/176 (21%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
LI K G A ++ ++ +G+ P+VV++T ++ + R G+ A + ++M+++G
Sbjct: 466 LIDGLCKAGKLETAWELFEKLSNEGHEPNVVTYTIMIHGFCREGQVDKANVLIQKMEANG 525
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
P +TY +++ F E+NK +E +
Sbjct: 526 CTPDIITYNTLMRGFYESNKLEEVVQ---------------------------------- 551
Query: 222 KARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSKIYDQMQRAGLQPDVVSYALL 277
L MA++ V +T + ++ + ++ + + R +Q V + L+
Sbjct: 552 ----LLHRMAQKDVSPDAITCSIVVDMLSKDEKYQECLHLLPRFPIQKGVDKHLLM 603
>gi|449451896|ref|XP_004143696.1| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
mitochondrial-like [Cucumis sativus]
Length = 1032
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 105/392 (26%), Positives = 188/392 (47%), Gaps = 7/392 (1%)
Query: 101 MLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSS 160
+LI+ D KA +VL M + G P+V + L++AY + RY+ A + + M ++
Sbjct: 456 VLISGLCHSSDLQKANEVLDQMIRNGVKPNVFMYGTLIKAYVQESRYEMAIELLKIMIAN 515
Query: 161 GPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGY 220
G P Y ++ A K +EA+ M L+D + +KP+ + I +Y K+G
Sbjct: 516 GVLPDLFCYNCLIIGLCRAKKVEEAK---MLLVDMGEKGIKPNAHTYGAFINLYSKSGEI 572
Query: 221 EKARKLFALMAERGVQQSTVTYNSLMSFET---NYKEVSKIYDQMQRAGLQPDVVSYALL 277
+ A + F M G+ + V Y L+ N E + M GL PD+ +Y+ +
Sbjct: 573 QVAERYFKDMLSSGIVPNNVIYTILIKGHCDVGNTVEALSTFKCMLEKGLIPDIRAYSAI 632
Query: 278 INAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRC 337
I++ K + +EA+ VF + L GV P YN L+ F G +++A ++ M +
Sbjct: 633 IHSLSKNGKTKEAMGVFLKFLKTGVVPDVFLYNSLISGFCKEGDIEKASQLYDEMLHNGI 692
Query: 338 SPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMME 397
+P+I Y T+++ ++ A + F +++ VP+V+TY T+I GY K NL + +
Sbjct: 693 NPNIVVYNTLINGLCKLGEVTKARELFDEIEEKDLVPDVVTYSTIIDGYCKSGNLTEAFK 752
Query: 398 IYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAK 457
++D+M GI P+ I+ ++D GK + + A+ + E + +++ S K
Sbjct: 753 LFDEMISKGISPDGYIYCILIDGCGKEGNLEKALSLFHEAQQKSVGSLSAFNSLIDSFCK 812
Query: 458 TADERNEANELLGNFNHPNNEPGINGLSISVD 489
+ EA EL + P I +I +D
Sbjct: 813 HG-KVIEARELFDDMVDKKLTPNIVTYTILID 843
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 100/381 (26%), Positives = 185/381 (48%), Gaps = 12/381 (3%)
Query: 76 WNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHT 135
W V ++E + + + +I A+ K GD K + VLS M K+ P++ ++
Sbjct: 227 WKVYGSMVEAKIVPDVYTYTN-----VIKAHCKVGDVIKGKMVLSEMEKEC-KPNLFTYN 280
Query: 136 ALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDE 195
A + + G A + + M G P TY +++ F + + KEA+ +F ++
Sbjct: 281 AFIGGLCQTGAVDEALEVKKLMMEKGLGPDGHTYTLLVDGFCKQKRSKEAKLIFESM--- 337
Query: 196 EKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEV 255
S L P++ + +I + K G E+A ++ M RG++ + VTYN+++ E+
Sbjct: 338 PSSGLNPNRFTYTALIDGFIKEGNIEEALRIKDEMITRGLKLNVVTYNAMIGGIAKAGEM 397
Query: 256 SK---IYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNIL 312
+K ++++M AGL+PD +Y LLI+ Y K+ +A + EM + P+ Y++L
Sbjct: 398 AKAMSLFNEMLMAGLEPDTWTYNLLIDGYLKSHDMAKACELLAEMKARKLTPSPFTYSVL 457
Query: 313 LDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGF 372
+ S + +A V M R+ P++ Y T++ AYV S E A + + + +G
Sbjct: 458 ISGLCHSSDLQKANEVLDQMIRNGVKPNVFMYGTLIKAYVQESRYEMAIELLKIMIANGV 517
Query: 373 VPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVV 432
+P++ Y LI G + +E+ + M GIKPN + ++ Y K+ + A
Sbjct: 518 LPDLFCYNCLIIGLCRAKKVEEAKMLLVDMGEKGIKPNAHTYGAFINLYSKSGEIQVAER 577
Query: 433 WYKEMESCGFPPDQKAKNILL 453
++K+M S G P+ IL+
Sbjct: 578 YFKDMLSSGIVPNNVIYTILI 598
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 92/368 (25%), Positives = 178/368 (48%), Gaps = 11/368 (2%)
Query: 117 KVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLF 176
KV M + P V ++T +++A+ + G + + M+ +P+ TY +
Sbjct: 228 KVYGSMVEAKIVPDVYTYTNVIKAHCKVGDVIKGKMVLSEMEKEC-KPNLFTYNAFIGGL 286
Query: 177 VEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQ 236
+ EA EV ++++ L PD + +++ + K ++A+ +F M G+
Sbjct: 287 CQTGAVDEALEVKKLMMEK---GLGPDGHTYTLLVDGFCKQKRSKEAKLIFESMPSSGLN 343
Query: 237 QSTVTYNSLM-SF--ETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAV 293
+ TY +L+ F E N +E +I D+M GL+ +VV+Y +I KA +A+++
Sbjct: 344 PNRFTYTALIDGFIKEGNIEEALRIKDEMITRGLKLNVVTYNAMIGGIAKAGEMAKAMSL 403
Query: 294 FEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVN 353
F EML AG+ P YN+L+D + S + +A + M+ + +P +Y+ ++S +
Sbjct: 404 FNEMLMAGLEPDTWTYNLLIDGYLKSHDMAKACELLAEMKARKLTPSPFTYSVLISGLCH 463
Query: 354 ASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTI 413
+SD++ A + ++ ++G PNV YGTLIK Y + + E +E+ M NG+ P+
Sbjct: 464 SSDLQKANEVLDQMIRNGVKPNVFMYGTLIKAYVQESRYEMAIELLKIMIANGVLPDLFC 523
Query: 414 FTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEA----NELL 469
+ ++ + K + A + +M G P+ ++L + E A ++L
Sbjct: 524 YNCLIIGLCRAKKVEEAKMLLVDMGEKGIKPNAHTYGAFINLYSKSGEIQVAERYFKDML 583
Query: 470 GNFNHPNN 477
+ PNN
Sbjct: 584 SSGIVPNN 591
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 101/405 (24%), Positives = 183/405 (45%), Gaps = 11/405 (2%)
Query: 81 EVLEWLRIQSWWDF---NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTAL 137
E+L+ L ++ + +F N F + I + G N+A V +G+ P+++ L
Sbjct: 155 EILDSL-VRCYREFGGSNLTVFDIFIDKFRVLGFLNEASSVFIASISEGFFPTLICCNNL 213
Query: 138 MEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEK 197
M + ++ M + P TY ++K + + + V L E +
Sbjct: 214 MRDLLKANMMGLFWKVYGSMVEAKIVPDVYTYTNVIKAHCKVGDVIKGKMV----LSEME 269
Query: 198 SPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLM---SFETNYKE 254
KP+ ++ I + G ++A ++ LM E+G+ TY L+ + KE
Sbjct: 270 KECKPNLFTYNAFIGGLCQTGAVDEALEVKKLMMEKGLGPDGHTYTLLVDGFCKQKRSKE 329
Query: 255 VSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLD 314
I++ M +GL P+ +Y LI+ + K EEAL + +EM+ G++ YN ++
Sbjct: 330 AKLIFESMPSSGLNPNRFTYTALIDGFIKEGNIEEALRIKDEMITRGLKLNVVTYNAMIG 389
Query: 315 AFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVP 374
A +G + +A ++F M PD +Y ++ Y+ + DM A + +K P
Sbjct: 390 GIAKAGEMAKAMSLFNEMLMAGLEPDTWTYNLLIDGYLKSHDMAKACELLAEMKARKLTP 449
Query: 375 NVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWY 434
+ TY LI G ++L+K E+ D+M NG+KPN ++ T++ AY + ++ A+
Sbjct: 450 SPFTYSVLISGLCHSSDLQKANEVLDQMIRNGVKPNVFMYGTLIKAYVQESRYEMAIELL 509
Query: 435 KEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEP 479
K M + G PD N L+ A + EA LL + +P
Sbjct: 510 KIMIANGVLPDLFCYNCLIIGLCRAKKVEEAKMLLVDMGEKGIKP 554
Score = 126 bits (316), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 100/442 (22%), Positives = 193/442 (43%), Gaps = 42/442 (9%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + + +LI + G+ +A M +KG P + +++A++ + + G+ K A +F
Sbjct: 590 NNVIYTILIKGHCDVGNTVEALSTFKCMLEKGLIPDIRAYSAIIHSLSKNGKTKEAMGVF 649
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
+ +G P Y ++ F + ++A +++ +L + + P+ +++ +I
Sbjct: 650 LKFLKTGVVPDVFLYNSLISGFCKEGDIEKASQLYDEML---HNGINPNIVVYNTLINGL 706
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSLM---SFETNYKEVSKIYDQMQRAGLQPDV 271
K G KAR+LF + E+ + VTY++++ N E K++D+M G+ PD
Sbjct: 707 CKLGEVTKARELFDEIEEKDLVPDVVTYSTIIDGYCKSGNLTEAFKLFDEMISKGISPDG 766
Query: 272 VSYALLINAYGKARREEEALAVF----------------------------------EEM 297
Y +LI+ GK E+AL++F ++M
Sbjct: 767 YIYCILIDGCGKEGNLEKALSLFHEAQQKSVGSLSAFNSLIDSFCKHGKVIEARELFDDM 826
Query: 298 LDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDM 357
+D + P Y IL+DA+ + M+++A +F M P+ +YT++L +Y +
Sbjct: 827 VDKKLTPNIVTYTILIDAYGKAEMMEEAEQLFLDMETRNIIPNTLTYTSLLLSYNQIGNR 886
Query: 358 EGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTI 417
F+ ++ G + I YG + Y K + +++ +K V GIK +F +
Sbjct: 887 FKMISLFKDMEARGIACDAIAYGVMASAYCKEGKSLEALKLLNKSLVEGIKLEDDVFDAL 946
Query: 418 MDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKN-ILLSLAKTADERNEANELLGNFNHPN 476
+ K K + + EM K N +LL K+ +E +EA+++LG
Sbjct: 947 IFHLCKEKQISTVLELLSEMGKEELSLSSKTCNTLLLGFYKSGNE-DEASKVLGVMQRLG 1005
Query: 477 NEPGINGLSISVDEEDDDDDDD 498
P L+ S+ DD D
Sbjct: 1006 WVPTSLSLTDSISTGRDDMKSD 1027
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 59/260 (22%), Positives = 123/260 (47%), Gaps = 4/260 (1%)
Query: 225 KLFALMAERGVQQSTVTYNSLMSFETNYKEVSK---IYDQMQRAGLQPDVVSYALLINAY 281
K++ M E + TY +++ +V K + +M++ +P++ +Y I
Sbjct: 228 KVYGSMVEAKIVPDVYTYTNVIKAHCKVGDVIKGKMVLSEMEKE-CKPNLFTYNAFIGGL 286
Query: 282 GKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDI 341
+ +EAL V + M++ G+ P Y +L+D F +A+ +F+ M +P+
Sbjct: 287 CQTGAVDEALEVKKLMMEKGLGPDGHTYTLLVDGFCKQKRSKEAKLIFESMPSSGLNPNR 346
Query: 342 CSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDK 401
+YT ++ ++ ++E A + + G NV+TY +I G AK + K M ++++
Sbjct: 347 FTYTALIDGFIKEGNIEEALRIKDEMITRGLKLNVVTYNAMIGGIAKAGEMAKAMSLFNE 406
Query: 402 MRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADE 461
M + G++P+ + ++D Y K+ D A EM++ P ++L+S + +
Sbjct: 407 MLMAGLEPDTWTYNLLIDGYLKSHDMAKACELLAEMKARKLTPSPFTYSVLISGLCHSSD 466
Query: 462 RNEANELLGNFNHPNNEPGI 481
+ANE+L +P +
Sbjct: 467 LQKANEVLDQMIRNGVKPNV 486
>gi|225459022|ref|XP_002285611.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like isoform 1 [Vitis vinifera]
Length = 610
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 112/406 (27%), Positives = 195/406 (48%), Gaps = 16/406 (3%)
Query: 58 LPKDLVLGTLVRLKQLKKWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEK 117
+P ++ R+ + KK V E+LE QS + + + +LI+ Y K G+ + A +
Sbjct: 150 IPCTSLIRGFCRIGKTKKATWVMEILE----QSGAVPDVITYNVLISGYCKSGEIDNALQ 205
Query: 118 VLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFV 177
VL MN AP VV++ ++ G+ K A + R P +TY I+++
Sbjct: 206 VLDRMN---VAPDVVTYNTILRTLCDSGKLKQAMEVLDRQLQKECYPDVITYTILIEATC 262
Query: 178 EANKFKEAEEVFMTLLDEEKSP-LKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQ 236
+ + +A M LLDE ++ KPD ++++I K G ++A K M G Q
Sbjct: 263 KESGVGQA----MKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCQ 318
Query: 237 QSTVTYNSL---MSFETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAV 293
+ +T+N + M + + K+ M R G P VV++ +LIN + A+ +
Sbjct: 319 PNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLGRAIDI 378
Query: 294 FEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVN 353
E+M G P +YN LL F +D+A M C PDI +Y T+L+A
Sbjct: 379 LEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCK 438
Query: 354 ASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTI 413
++ A + +L G P +ITY T+I G +KV E+ +++ D+MR G+KP+
Sbjct: 439 DGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDIIT 498
Query: 414 FTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKN-ILLSLAKT 458
+++++ + D A+ ++ ++E G P+ N I+L L K+
Sbjct: 499 YSSLVSGLSREGKVDEAIKFFHDLEGLGIRPNAITYNSIMLGLCKS 544
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 102/416 (24%), Positives = 189/416 (45%), Gaps = 12/416 (2%)
Query: 40 EVGSAVAVLRSERTRGQPLPKDLVLGTLVRLKQLKKWNVVSEVLE-WLRIQSWWDFNEMD 98
E+ +A+ VL + + +L TL +LK+ EVL+ L+ + + D +
Sbjct: 199 EIDNALQVLDRMNVAPDVVTYNTILRTLCDSGKLKQ---AMEVLDRQLQKECYPDV--IT 253
Query: 99 FLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQ 158
+ +LI A K+ +A K+L M KG P VV++ L+ + GR A M
Sbjct: 254 YTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKFLNNMP 313
Query: 159 SSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAG 218
S G +P+ +T+ IIL+ ++ +AE++ +L + SP F+++I + G
Sbjct: 314 SYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSP---SVVTFNILINFLCRQG 370
Query: 219 GYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSKI---YDQMQRAGLQPDVVSYA 275
+A + M G ++++YN L+ K++ + D M G PD+V+Y
Sbjct: 371 LLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYN 430
Query: 276 LLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRD 335
L+ A K + + A+ + ++ G P YN ++D + G ++A + MRR
Sbjct: 431 TLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRRK 490
Query: 336 RCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKM 395
PDI +Y++++S ++ A KFF L+ G PN ITY +++ G K ++
Sbjct: 491 GLKPDIITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRPNAITYNSIMLGLCKSRQTDRA 550
Query: 396 MEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNI 451
++ M KP + +T +++ A+ E+ S G A+ +
Sbjct: 551 IDFLAYMISKRCKPTEATYTILIEGIAYEGLAKEALDLLNELCSRGLVKKSSAEQV 606
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 92/409 (22%), Positives = 177/409 (43%), Gaps = 11/409 (2%)
Query: 108 KQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSAL 167
+ G+ K L M +G P ++ T+L+ + R G+ K A + ++ SG P +
Sbjct: 126 RNGELEDGFKFLESMVYRGDIPDIIPCTSLIRGFCRIGKTKKATWVMEILEQSGAVPDVI 185
Query: 168 TYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLF 227
TY +++ + ++ + A +V ++ + PD ++ ++ +G ++A ++
Sbjct: 186 TYNVLISGYCKSGEIDNALQVL------DRMNVAPDVVTYNTILRTLCDSGKLKQAMEVL 239
Query: 228 ALMAERGVQQSTVTYNSLM---SFETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKA 284
++ +TY L+ E+ + K+ D+M+ G +PDVV+Y +LIN K
Sbjct: 240 DRQLQKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKE 299
Query: 285 RREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSY 344
R +EA+ M G +P +NI+L + +G A + M R CSP + ++
Sbjct: 300 GRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTF 359
Query: 345 TTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRV 404
+++ + A ++ G PN ++Y L+ G+ K +++ +E D M
Sbjct: 360 NILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVS 419
Query: 405 NGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNE 464
G P+ + T++ A K+ D AV ++ S G P N ++ +
Sbjct: 420 RGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTER 479
Query: 465 ANELLGNFNHPNNEPGINGLSISVDEEDDDDDDDEDDDDNIYHDGDGDG 513
A +LL +P I S V + DE +HD +G G
Sbjct: 480 AIKLLDEMRRKGLKPDIITYSSLVSGLSREGKVDE--AIKFFHDLEGLG 526
Score = 43.5 bits (101), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 26/122 (21%), Positives = 55/122 (45%), Gaps = 3/122 (2%)
Query: 348 LSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGI 407
L V ++E KF + G +P++I +LI+G+ ++ +K + + + +G
Sbjct: 121 LRRLVRNGELEDGFKFLESMVYRGDIPDIIPCTSLIRGFCRIGKTKKATWVMEILEQSGA 180
Query: 408 KPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANE 467
P+ + ++ Y K+ + D+A+ M PD N +L + + +A E
Sbjct: 181 VPDVITYNVLISGYCKSGEIDNALQVLDRMN---VAPDVVTYNTILRTLCDSGKLKQAME 237
Query: 468 LL 469
+L
Sbjct: 238 VL 239
>gi|30794106|gb|AAP40495.1| unknown protein [Arabidopsis thaliana]
Length = 974
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 97/349 (27%), Positives = 172/349 (49%), Gaps = 8/349 (2%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
LI Y ++ + + ++L M K+ S ++ +++ G A I + M +SG
Sbjct: 388 LIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASG 447
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSP-LKPDQKMFHMMIYMYKKAGGY 220
RP+ + Y ++K F++ ++F +A M +L E K + PD ++ +I KA
Sbjct: 448 CRPNVVIYTTLIKTFLQNSRFGDA----MRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRM 503
Query: 221 EKARKLFALMAERGVQQSTVTYNSLMSF---ETNYKEVSKIYDQMQRAGLQPDVVSYALL 277
++AR M E G++ + TY + +S + + K +M+ G+ P+ V L
Sbjct: 504 DEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGL 563
Query: 278 INAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRC 337
IN Y K + EA + + M+D G+ K Y +L++ + VD A +F+ MR
Sbjct: 564 INEYCKKEKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGI 623
Query: 338 SPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMME 397
+PD+ SY +++ + +M+ A F + ++G PNVI Y L+ G+ + +EK E
Sbjct: 624 APDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKE 683
Query: 398 IYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQ 446
+ D+M V G+ PN + TI+D Y K+ D A + EM+ G PD
Sbjct: 684 LLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDS 732
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 92/384 (23%), Positives = 169/384 (44%), Gaps = 44/384 (11%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + I+ Y + +F A+K + M + G P+ V T L+ Y + + A + +
Sbjct: 521 NAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKEKVIEACSAY 580
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
R M G A TY +++ + +K +AEE+F + + PD + ++I +
Sbjct: 581 RSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREM---RGKGIAPDVFSYGVLINGF 637
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSK---IYDQMQRAGLQPDV 271
K G +KA +F M E G+ + + YN L+ E+ K + D+M GL P+
Sbjct: 638 SKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNA 697
Query: 272 VSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKC 331
V+Y +I+ Y K+ EA +F+EM G+ P Y L+D V++A T+F
Sbjct: 698 VTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGT 757
Query: 332 MRRDRCS--------------------------------------PDICSYTTMLSAYVN 353
++ S P+ +Y M+
Sbjct: 758 NKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCK 817
Query: 354 ASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTI 413
++E A++ F +++ +P VITY +L+ GY K+ +M ++D+ GI+P+ +
Sbjct: 818 EGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIM 877
Query: 414 FTTIMDAYGKNKDFDSAVVWYKEM 437
++ I++A+ K A+V +M
Sbjct: 878 YSVIINAFLKEGMTTKALVLVDQM 901
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 92/367 (25%), Positives = 165/367 (44%), Gaps = 14/367 (3%)
Query: 29 KNWRRLMNQI---EEVGSAVAVLRSERTRGQPLPKDLVLGTLVR-LKQLKKWNVVSEVLE 84
K + LMN + ++V A + R R +G P G L+ +L S + +
Sbjct: 593 KTYTVLMNGLFKNDKVDDAEEIFREMRGKGIA-PDVFSYGVLINGFSKLGNMQKASSIFD 651
Query: 85 WLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRG 144
+ ++ N + + ML+ + + G+ KA+++L M+ KG P+ V++ +++ Y +
Sbjct: 652 EM-VEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKS 710
Query: 145 GRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQ 204
G A +F M+ G P + Y ++ N + A +F T S P
Sbjct: 711 GDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTNKKGCASSTAPFN 770
Query: 205 KMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSF---ETNYKEVSKIYDQ 261
+ + + K E +L +R + + VTYN ++ + E N + +++ Q
Sbjct: 771 ALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQ 830
Query: 262 MQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGM 321
MQ A L P V++Y L+N Y K R E VF+E + AG+ P H Y+++++AF GM
Sbjct: 831 MQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGM 890
Query: 322 VDQARTVFKCMRR-----DRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNV 376
+A + M D C I + +LS + +ME AEK + + ++P+
Sbjct: 891 TTKALVLVDQMFAKNAVDDGCKLSISTCRALLSGFAKVGEMEVAEKVMENMVRLQYIPDS 950
Query: 377 ITYGTLI 383
T LI
Sbjct: 951 ATVIELI 957
Score = 115 bits (287), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 90/392 (22%), Positives = 169/392 (43%), Gaps = 33/392 (8%)
Query: 69 RLKQLKKWNVVSEVLEWLRIQSWWD-----------FNEMDFLMLITAYGKQGDFNKAEK 117
RL + K ++ +L W R+ +WD F+ + MLI A+ + G+ +
Sbjct: 185 RLSRCKV--LLDALLRWNRLDLFWDVYKGMVERNVVFDVKTYHMLIIAHCRAGNVQLGKD 242
Query: 118 VLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFV 177
VL F +K + TA + G A + M G P TY +++
Sbjct: 243 VL-FKTEKEF------RTATLNVDG-------ALKLKESMICKGLVPLKYTYDVLIDGLC 288
Query: 178 EANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQ 237
+ + ++A+ + L++ + + D + ++I K + A+ L M G+
Sbjct: 289 KIKRLEDAKSL---LVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEMVSHGINI 345
Query: 238 STVTYNS---LMSFETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVF 294
Y+ +MS E ++ ++D M +GL P +YA LI Y + + + +
Sbjct: 346 KPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELL 405
Query: 295 EEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNA 354
EM + + Y ++ SG +D A + K M C P++ YTT++ ++
Sbjct: 406 VEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQN 465
Query: 355 SDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIF 414
S A + + +K+ G P++ Y +LI G +K +++ +M NG+KPN +
Sbjct: 466 SRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTY 525
Query: 415 TTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQ 446
+ Y + +F SA + KEM CG P++
Sbjct: 526 GAFISGYIEASEFASADKYVKEMRECGVLPNK 557
Score = 95.1 bits (235), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 87/358 (24%), Positives = 155/358 (43%), Gaps = 37/358 (10%)
Query: 151 EAIFRRMQSSG----PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKM 206
EA+F S G PR S +++L + N+ +V+ +++ + D K
Sbjct: 169 EAVFVFSSSMGLELVPRLSRC--KVLLDALLRWNRLDLFWDVYKGMVERN---VVFDVKT 223
Query: 207 FHMMIYMYKKAGGYE---------------------KARKLFALMAERGVQQSTVTYNSL 245
+HM+I + +AG + A KL M +G+ TY+ L
Sbjct: 224 YHMLIIAHCRAGNVQLGKDVLFKTEKEFRTATLNVDGALKLKESMICKGLVPLKYTYDVL 283
Query: 246 MSFETNYKEV---SKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGV 302
+ K + + +M G+ D +Y+LLI+ K R + A + EM+ G+
Sbjct: 284 IDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEMVSHGI 343
Query: 303 RPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEK 362
Y+ + + G++++A+ +F M P +Y +++ Y ++ +
Sbjct: 344 NIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYE 403
Query: 363 FFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYG 422
+K+ V + TYGT++KG +L+ I +M +G +PN I+TT++ +
Sbjct: 404 LLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFL 463
Query: 423 KNKDFDSAVVWYKEMESCGFPPDQKAKNIL---LSLAKTADE-RNEANELLGNFNHPN 476
+N F A+ KEM+ G PD N L LS AK DE R+ E++ N PN
Sbjct: 464 QNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPN 521
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 59/246 (23%), Positives = 98/246 (39%), Gaps = 34/246 (13%)
Query: 218 GGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSKIYDQMQRAGLQPDVVSYALL 277
G +EKA + M ER + V ++S++ + G D V + +L
Sbjct: 111 GSFEKALSVVERMIERNWPVAEV-WSSIVRCSQEF------------VGKSDDGVLFGIL 157
Query: 278 INAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRC 337
+ Y EEA+ VF + + P +LLDA +D V+K M
Sbjct: 158 FDGYIAKGYIEEAVFVFSSSMGLELVPRLSRCKVLLDALLRWNRLDLFWDVYKGMVERNV 217
Query: 338 SPDICSYTTMLSAYVNASDME-------GAEKFFR----------RLKQD----GFVPNV 376
D+ +Y ++ A+ A +++ EK FR +LK+ G VP
Sbjct: 218 VFDVKTYHMLIIAHCRAGNVQLGKDVLFKTEKEFRTATLNVDGALKLKESMICKGLVPLK 277
Query: 377 ITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKE 436
TY LI G K+ LE + +M G+ + ++ ++D K ++ D+A E
Sbjct: 278 YTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHE 337
Query: 437 MESCGF 442
M S G
Sbjct: 338 MVSHGI 343
>gi|413953163|gb|AFW85812.1| hypothetical protein ZEAMMB73_202457 [Zea mays]
Length = 731
Score = 166 bits (420), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 102/389 (26%), Positives = 194/389 (49%), Gaps = 6/389 (1%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + +L+ A +G +A +L M G P+VV++ L+ A+ R G AE +
Sbjct: 189 NVYTYNILVRALCGRGHRKEALSILRDMRGAGCGPNVVTYNTLVAAFFRAGEVDGAERLV 248
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
M+ G +P+ +T+ ++ +A K ++A +VF ++ E L PD ++ ++ Y
Sbjct: 249 GMMREGGLKPNLVTFNSMVNGMCKAGKMEDARKVFDEMVREG---LAPDGVSYNTLVGGY 305
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSL---MSFETNYKEVSKIYDQMQRAGLQPDV 271
KAG +A +FA M ++G+ VT+ SL M N + + QM+ GLQ +
Sbjct: 306 CKAGCSHEALSVFAEMTQKGIMPDVVTFTSLIHVMCKAGNLERAVTLVRQMRERGLQMNE 365
Query: 272 VSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKC 331
V++ LI+ + K ++AL M ++P+ YN L++ + + G +D+AR +
Sbjct: 366 VTFTALIDGFCKKGFLDDALLAVRGMKQCRIKPSVVCYNALINGYCMVGRMDEARELLHE 425
Query: 332 MRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNN 391
M PD+ +Y+T++SAY D A + +++ + G +P+ ITY +LI+
Sbjct: 426 MEAKGLKPDVVTYSTIISAYCKNCDTHSAFELNQQMLEKGVLPDAITYSSLIRVLCGEKR 485
Query: 392 LEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNI 451
L ++ M G++P++ +T+++D + K + +SA+ + +M G PD ++
Sbjct: 486 LSDAHVLFKNMIKLGLQPDEFTYTSLIDGHCKEGNVESALSLHDKMVKAGVLPDVVTYSV 545
Query: 452 LLSLAKTADERNEANELLGNFNHPNNEPG 480
L++ + EA +LL H + P
Sbjct: 546 LINGLSKSARAMEAQQLLFKLYHEDPIPA 574
Score = 155 bits (392), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 99/350 (28%), Positives = 171/350 (48%), Gaps = 7/350 (2%)
Query: 126 GYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEA 185
GY PSV+++ A++ A +A F M S G P+ TY I+++ KEA
Sbjct: 151 GYVPSVLAYNAVLLALSDAS-LTSARRFFDSMLSDGVAPNVYTYNILVRALCGRGHRKEA 209
Query: 186 EEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSL 245
+ L D + P+ ++ ++ + +AG + A +L +M E G++ + VT+NS+
Sbjct: 210 LSI---LRDMRGAGCGPNVVTYNTLVAAFFRAGEVDGAERLVGMMREGGLKPNLVTFNSM 266
Query: 246 ---MSFETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGV 302
M ++ K++D+M R GL PD VSY L+ Y KA EAL+VF EM G+
Sbjct: 267 VNGMCKAGKMEDARKVFDEMVREGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGI 326
Query: 303 RPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEK 362
P + L+ +G +++A T+ + MR + ++T ++ + ++ A
Sbjct: 327 MPDVVTFTSLIHVMCKAGNLERAVTLVRQMRERGLQMNEVTFTALIDGFCKKGFLDDALL 386
Query: 363 FFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYG 422
R +KQ P+V+ Y LI GY V +++ E+ +M G+KP+ ++TI+ AY
Sbjct: 387 AVRGMKQCRIKPSVVCYNALINGYCMVGRMDEARELLHEMEAKGLKPDVVTYSTIISAYC 446
Query: 423 KNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNF 472
KN D SA ++M G PD + L+ + ++A+ L N
Sbjct: 447 KNCDTHSAFELNQQMLEKGVLPDAITYSSLIRVLCGEKRLSDAHVLFKNM 496
Score = 125 bits (313), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 86/367 (23%), Positives = 165/367 (44%), Gaps = 41/367 (11%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + + L+ A+ + G+ + AE+++ M + G P++V+ +++ + G+ ++A +F
Sbjct: 224 NVVTYNTLVAAFFRAGEVDGAERLVGMMREGGLKPNLVTFNSMVNGMCKAGKMEDARKVF 283
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
M G P ++Y ++ + +A EA VF + + + PD F +I++
Sbjct: 284 DEMVREGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEM---TQKGIMPDVVTFTSLIHVM 340
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSLM---------------------------- 246
KAG E+A L M ERG+Q + VT+ +L+
Sbjct: 341 CKAGNLERAVTLVRQMRERGLQMNEVTFTALIDGFCKKGFLDDALLAVRGMKQCRIKPSV 400
Query: 247 ----SFETNYKEVSK------IYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEE 296
+ Y V + + +M+ GL+PDVV+Y+ +I+AY K A + ++
Sbjct: 401 VCYNALINGYCMVGRMDEARELLHEMEAKGLKPDVVTYSTIISAYCKNCDTHSAFELNQQ 460
Query: 297 MLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASD 356
ML+ GV P Y+ L+ + A +FK M + PD +YT+++ + +
Sbjct: 461 MLEKGVLPDAITYSSLIRVLCGEKRLSDAHVLFKNMIKLGLQPDEFTYTSLIDGHCKEGN 520
Query: 357 MEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTT 416
+E A ++ + G +P+V+TY LI G +K + ++ K+ P T +
Sbjct: 521 VESALSLHDKMVKAGVLPDVVTYSVLINGLSKSARAMEAQQLLFKLYHEDPIPANTKYDA 580
Query: 417 IMDAYGK 423
+M K
Sbjct: 581 LMHCCRK 587
Score = 114 bits (286), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 84/312 (26%), Positives = 143/312 (45%), Gaps = 21/312 (6%)
Query: 92 WDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAE 151
NE+ F LI + K+G + A + M + PSVV + AL+ Y GR A
Sbjct: 361 LQMNEVTFTALIDGFCKKGFLDDALLAVRGMKQCRIKPSVVCYNALINGYCMVGRMDEAR 420
Query: 152 AIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMI 211
+ M++ G +P +TY I+ + + A E+ +L EK L PD + +I
Sbjct: 421 ELLHEMEAKGLKPDVVTYSTIISAYCKNCDTHSAFELNQQML--EKGVL-PDAITYSSLI 477
Query: 212 YMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLM---SFETNYKEVSKIYDQMQRAGLQ 268
+ A LF M + G+Q TY SL+ E N + ++D+M +AG+
Sbjct: 478 RVLCGEKRLSDAHVLFKNMIKLGLQPDEFTYTSLIDGHCKEGNVESALSLHDKMVKAGVL 537
Query: 269 PDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNIL---------------L 313
PDVV+Y++LIN K+ R EA + ++ P + Y+ L L
Sbjct: 538 PDVVTYSVLINGLSKSARAMEAQQLLFKLYHEDPIPANTKYDALMHCCRKAELKSVLALL 597
Query: 314 DAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFV 373
F + G++++A V++ M + D Y+ ++ + A ++ A F +++ Q GF
Sbjct: 598 KGFCMKGLMNEADKVYQSMLDRNWNLDGSVYSVLIHGHCRAGNVMKALSFHKQMLQGGFA 657
Query: 374 PNVITYGTLIKG 385
PN + +LI+G
Sbjct: 658 PNSTSTISLIRG 669
Score = 65.1 bits (157), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 69/328 (21%), Positives = 130/328 (39%), Gaps = 58/328 (17%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
LI Y G ++A ++L M KG P VV+++ ++ AY + +A + ++M G
Sbjct: 406 LINGYCMVGRMDEARELLHEMEAKGLKPDVVTYSTIISAYCKNCDTHSAFELNQQMLEKG 465
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
P A+TY ++++ + +A +F ++ K L+PD+ + +I + K G E
Sbjct: 466 VLPDAITYSSLIRVLCGEKRLSDAHVLFKNMI---KLGLQPDEFTYTSLIDGHCKEGNVE 522
Query: 222 KARKLFALMAERGVQQSTVT-----------------------------------YNSLM 246
A L M + GV VT Y++LM
Sbjct: 523 SALSLHDKMVKAGVLPDVVTYSVLINGLSKSARAMEAQQLLFKLYHEDPIPANTKYDALM 582
Query: 247 ------------------SFETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREE 288
+ E K+Y M D Y++LI+ + +A
Sbjct: 583 HCCRKAELKSVLALLKGFCMKGLMNEADKVYQSMLDRNWNLDGSVYSVLIHGHCRAGNVM 642
Query: 289 EALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCS-PDICSYTTM 347
+AL+ ++ML G P + L+ +GMV +A V + + + CS D + +
Sbjct: 643 KALSFHKQMLQGGFAPNSTSTISLIRGLFENGMVVEADQVIQQL-LNYCSLADAEASKAL 701
Query: 348 LSAYVNASDMEGAEKFFRRLKQDGFVPN 375
+ +N +++ + +DG +P+
Sbjct: 702 IDLNLNEGNVDAVLDVLHGMAKDGLLPS 729
Score = 39.3 bits (90), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 32/146 (21%), Positives = 59/146 (40%), Gaps = 8/146 (5%)
Query: 371 GFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSA 430
G+VP+V+ Y ++ + + L +D M +G+ PN + ++ A A
Sbjct: 151 GYVPSVLAYNAVLLALSDAS-LTSARRFFDSMLSDGVAPNVYTYNILVRALCGRGHRKEA 209
Query: 431 VVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPG-------ING 483
+ ++M G P+ N L++ A E + A L+G +P +NG
Sbjct: 210 LSILRDMRGAGCGPNVVTYNTLVAAFFRAGEVDGAERLVGMMREGGLKPNLVTFNSMVNG 269
Query: 484 LSISVDEEDDDDDDDEDDDDNIYHDG 509
+ + ED DE + + DG
Sbjct: 270 MCKAGKMEDARKVFDEMVREGLAPDG 295
>gi|147833323|emb|CAN61988.1| hypothetical protein VITISV_026694 [Vitis vinifera]
Length = 553
Score = 166 bits (420), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 112/406 (27%), Positives = 195/406 (48%), Gaps = 16/406 (3%)
Query: 58 LPKDLVLGTLVRLKQLKKWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEK 117
+P ++ R+ + KK V E+LE QS + + + +LI+ Y K G+ + A +
Sbjct: 93 IPCTSLIRGFCRIGKTKKATWVMEILE----QSGAVPDVITYNVLISGYCKSGEIDNALQ 148
Query: 118 VLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFV 177
VL MN AP VV++ ++ G+ K A + R P +TY I+++
Sbjct: 149 VLDRMN---VAPDVVTYNTILRTLCDSGKLKQAMEVLDRQLQKECYPDVITYTILIEATC 205
Query: 178 EANKFKEAEEVFMTLLDEEKSP-LKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQ 236
+ + +A M LLDE ++ KPD ++++I K G ++A K M G Q
Sbjct: 206 KESGVGQA----MKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCQ 261
Query: 237 QSTVTYNSL---MSFETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAV 293
+ +T+N + M + + K+ M R G P VV++ +LIN + A+ +
Sbjct: 262 PNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLGRAIDI 321
Query: 294 FEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVN 353
E+M G P +YN LL F +D+A M C PDI +Y T+L+A
Sbjct: 322 LEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCK 381
Query: 354 ASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTI 413
++ A + +L G P +ITY T+I G +KV E+ +++ D+MR G+KP+
Sbjct: 382 DGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDIIT 441
Query: 414 FTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKN-ILLSLAKT 458
+++++ + D A+ ++ ++E G P+ N I+L L K+
Sbjct: 442 YSSLVSGLSREGKVDEAIKFFHDLEGLGIRPNAITYNSIMLGLCKS 487
Score = 135 bits (341), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 102/416 (24%), Positives = 189/416 (45%), Gaps = 12/416 (2%)
Query: 40 EVGSAVAVLRSERTRGQPLPKDLVLGTLVRLKQLKKWNVVSEVLE-WLRIQSWWDFNEMD 98
E+ +A+ VL + + +L TL +LK+ EVL+ L+ + + D +
Sbjct: 142 EIDNALQVLDRMNVAPDVVTYNTILRTLCDSGKLKQ---AMEVLDRQLQKECYPDV--IT 196
Query: 99 FLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQ 158
+ +LI A K+ +A K+L M KG P VV++ L+ + GR A M
Sbjct: 197 YTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKFLNNMP 256
Query: 159 SSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAG 218
S G +P+ +T+ IIL+ ++ +AE++ +L + SP F+++I + G
Sbjct: 257 SYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSP---SVVTFNILINFLCRQG 313
Query: 219 GYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSKI---YDQMQRAGLQPDVVSYA 275
+A + M G ++++YN L+ K++ + D M G PD+V+Y
Sbjct: 314 LLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYN 373
Query: 276 LLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRD 335
L+ A K + + A+ + ++ G P YN ++D + G ++A + MRR
Sbjct: 374 TLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRRK 433
Query: 336 RCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKM 395
PDI +Y++++S ++ A KFF L+ G PN ITY +++ G K ++
Sbjct: 434 GLKPDIITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRPNAITYNSIMLGLCKSRQTDRA 493
Query: 396 MEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNI 451
++ M KP + +T +++ A+ E+ S G A+ +
Sbjct: 494 IDFLAYMISKRCKPTEATYTILIEGIAYEGLAKEALDLLNELCSRGLVKKSSAEQV 549
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 92/409 (22%), Positives = 177/409 (43%), Gaps = 11/409 (2%)
Query: 108 KQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSAL 167
+ G+ K L M +G P ++ T+L+ + R G+ K A + ++ SG P +
Sbjct: 69 RNGELEDGFKFLESMVYRGDIPDIIPCTSLIRGFCRIGKTKKATWVMEILEQSGAVPDVI 128
Query: 168 TYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLF 227
TY +++ + ++ + A +V ++ + PD ++ ++ +G ++A ++
Sbjct: 129 TYNVLISGYCKSGEIDNALQVL------DRMNVAPDVVTYNTILRTLCDSGKLKQAMEVL 182
Query: 228 ALMAERGVQQSTVTYNSLM---SFETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKA 284
++ +TY L+ E+ + K+ D+M+ G +PDVV+Y +LIN K
Sbjct: 183 DRQLQKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKE 242
Query: 285 RREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSY 344
R +EA+ M G +P +NI+L + +G A + M R CSP + ++
Sbjct: 243 GRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTF 302
Query: 345 TTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRV 404
+++ + A ++ G PN ++Y L+ G+ K +++ +E D M
Sbjct: 303 NILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVS 362
Query: 405 NGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNE 464
G P+ + T++ A K+ D AV ++ S G P N ++ +
Sbjct: 363 RGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTER 422
Query: 465 ANELLGNFNHPNNEPGINGLSISVDEEDDDDDDDEDDDDNIYHDGDGDG 513
A +LL +P I S V + DE +HD +G G
Sbjct: 423 AIKLLDEMRRKGLKPDIITYSSLVSGLSREGKVDE--AIKFFHDLEGLG 469
Score = 43.5 bits (101), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 26/122 (21%), Positives = 55/122 (45%), Gaps = 3/122 (2%)
Query: 348 LSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGI 407
L V ++E KF + G +P++I +LI+G+ ++ +K + + + +G
Sbjct: 64 LRRLVRNGELEDGFKFLESMVYRGDIPDIIPCTSLIRGFCRIGKTKKATWVMEILEQSGA 123
Query: 408 KPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANE 467
P+ + ++ Y K+ + D+A+ M PD N +L + + +A E
Sbjct: 124 VPDVITYNVLISGYCKSGEIDNALQVLDRMN---VAPDVVTYNTILRTLCDSGKLKQAME 180
Query: 468 LL 469
+L
Sbjct: 181 VL 182
>gi|296088470|emb|CBI37461.3| unnamed protein product [Vitis vinifera]
Length = 822
Score = 166 bits (420), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 104/394 (26%), Positives = 187/394 (47%), Gaps = 6/394 (1%)
Query: 99 FLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQ 158
F ++ AY + GD KA +V + M K+G +P+VV+++ L+ R GR A +F ++
Sbjct: 348 FSSIMDAYVRVGDLGKAIEVYTRMLKEGISPNVVTYSILINGLCRNGRVLEACGVFGQIL 407
Query: 159 SSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAG 218
G PS LTY ++ F ++ ++ ++ +L + P D + M+I + G
Sbjct: 408 KQGLEPSVLTYSSLIDGFCKSENLRDGFGLYGIMLRKGHVP---DVVVCSMLINGLSRQG 464
Query: 219 GYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVS---KIYDQMQRAGLQPDVVSYA 275
++A + F +RG+ + +N+L+ K K+Y M + PDVV+Y
Sbjct: 465 MMDEALRFFFQAVKRGLTLNNYLFNALIDGCFRLKRTRDGLKMYILMGMYKVIPDVVTYT 524
Query: 276 LLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRD 335
+L+ + R +EALA+F ++L G P H Y L+D F +FK M+ +
Sbjct: 525 VLVKGLAEQGRLDEALALFFQLLKKGFSPDHIIYCTLIDGFCKKRDPATGLQIFKLMQSN 584
Query: 336 RCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKM 395
PDIC Y +++ + +E + R + + G P+++TY T+I GY + K
Sbjct: 585 GIFPDICIYNVLINMFFREGCVENVLELLREIIKYGLEPDIVTYNTMICGYCSLKIFSKA 644
Query: 396 MEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSL 455
+++++ ++ +PN FT ++DAY K+ D A++ + M G P+ + L+
Sbjct: 645 IKLFEVLKCGRTQPNAITFTILIDAYCKDGRMDDAMLIFSSMLERGPEPNILTYSCLIDG 704
Query: 456 AKTADERNEANELLGNFNHPNNEPGINGLSISVD 489
+ A EL P I SI +D
Sbjct: 705 YFKTENTESAFELYEKMLGDRVSPNIVSYSILID 738
Score = 144 bits (364), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 92/392 (23%), Positives = 187/392 (47%), Gaps = 41/392 (10%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
+ ++ K+G+ K + ++G P +V +++ G + A F M SG
Sbjct: 211 VFNSFLKRGEVEKGLNFHRALVERGLVPKIVDCNKILKGLCMGNQIGVASDFFDMMVRSG 270
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
P P+ +T+ ++ ++ + + EA ++ ++++ + PD ++ ++I +AG E
Sbjct: 271 PSPNLVTFSTLINVYCKELRLDEAFSLYNLMIEKG---IVPDLVIYSILINGLFRAGKLE 327
Query: 222 KARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSK---IYDQMQRAGLQPDVVSYALLI 278
+ LF++ RGV+ V ++S+M ++ K +Y +M + G+ P+VV+Y++LI
Sbjct: 328 EGNSLFSMALARGVKMDVVIFSSIMDAYVRVGDLGKAIEVYTRMLKEGISPNVVTYSILI 387
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCS 338
N + R EA VF ++L G+ P+ Y+ L+D F S + ++ M R
Sbjct: 388 NGLCRNGRVLEACGVFGQILKQGLEPSVLTYSSLIDGFCKSENLRDGFGLYGIMLRKGHV 447
Query: 339 PDICSYTTMLSAYVNASDMEGAEKFF----------------------RRLK--QDGF-- 372
PD+ + +++ M+ A +FF RLK +DG
Sbjct: 448 PDVVVCSMLINGLSRQGMMDEALRFFFQAVKRGLTLNNYLFNALIDGCFRLKRTRDGLKM 507
Query: 373 ---------VPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGK 423
+P+V+TY L+KG A+ L++ + ++ ++ G P+ I+ T++D + K
Sbjct: 508 YILMGMYKVIPDVVTYTVLVKGLAEQGRLDEALALFFQLLKKGFSPDHIIYCTLIDGFCK 567
Query: 424 NKDFDSAVVWYKEMESCGFPPDQKAKNILLSL 455
+D + + +K M+S G PD N+L+++
Sbjct: 568 KRDPATGLQIFKLMQSNGIFPDICIYNVLINM 599
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 83/300 (27%), Positives = 153/300 (51%), Gaps = 6/300 (2%)
Query: 117 KVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLF 176
K+ M P VV++T L++ GR A A+F ++ G P + Y ++ F
Sbjct: 506 KMYILMGMYKVIPDVVTYTVLVKGLAEQGRLDEALALFFQLLKKGFSPDHIIYCTLIDGF 565
Query: 177 VEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQ 236
+ ++F + + + + PD +++++I M+ + G E +L + + G++
Sbjct: 566 CKKRDPATGLQIFKLM---QSNGIFPDICIYNVLINMFFREGCVENVLELLREIIKYGLE 622
Query: 237 QSTVTYNSLMSFETNYKEVSK---IYDQMQRAGLQPDVVSYALLINAYGKARREEEALAV 293
VTYN+++ + K SK +++ ++ QP+ +++ +LI+AY K R ++A+ +
Sbjct: 623 PDIVTYNTMICGYCSLKIFSKAIKLFEVLKCGRTQPNAITFTILIDAYCKDGRMDDAMLI 682
Query: 294 FEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVN 353
F ML+ G P Y+ L+D + + + A +++ M DR SP+I SY+ ++
Sbjct: 683 FSSMLERGPEPNILTYSCLIDGYFKTENTESAFELYEKMLGDRVSPNIVSYSILIDGLCK 742
Query: 354 ASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTI 413
ME A F+ +P+VI YG LI+GY KV L + M +YD M VNGI P+ +
Sbjct: 743 KGLMEEASLAFQCAIGRHLLPDVIAYGILIRGYCKVGRLAEAMMLYDHMLVNGIMPDDLL 802
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 93/408 (22%), Positives = 185/408 (45%), Gaps = 6/408 (1%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + F LI Y K+ ++A + + M +KG P +V ++ L+ R G+ + ++F
Sbjct: 274 NLVTFSTLINVYCKELRLDEAFSLYNLMIEKGIVPDLVIYSILINGLFRAGKLEEGNSLF 333
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
+ G + + + I+ +V +A EV+ +L E S P+ + ++I
Sbjct: 334 SMALARGVKMDVVIFSSIMDAYVRVGDLGKAIEVYTRMLKEGIS---PNVVTYSILINGL 390
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSLM---SFETNYKEVSKIYDQMQRAGLQPDV 271
+ G +A +F + ++G++ S +TY+SL+ N ++ +Y M R G PDV
Sbjct: 391 CRNGRVLEACGVFGQILKQGLEPSVLTYSSLIDGFCKSENLRDGFGLYGIMLRKGHVPDV 450
Query: 272 VSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKC 331
V ++LIN + +EAL F + + G+ + +N L+D ++
Sbjct: 451 VVCSMLINGLSRQGMMDEALRFFFQAVKRGLTLNNYLFNALIDGCFRLKRTRDGLKMYIL 510
Query: 332 MRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNN 391
M + PD+ +YT ++ ++ A F +L + GF P+ I Y TLI G+ K +
Sbjct: 511 MGMYKVIPDVVTYTVLVKGLAEQGRLDEALALFFQLLKKGFSPDHIIYCTLIDGFCKKRD 570
Query: 392 LEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNI 451
++I+ M+ NGI P+ I+ +++ + + ++ + +E+ G PD N
Sbjct: 571 PATGLQIFKLMQSNGIFPDICIYNVLINMFFREGCVENVLELLREIIKYGLEPDIVTYNT 630
Query: 452 LLSLAKTADERNEANELLGNFNHPNNEPGINGLSISVDEEDDDDDDDE 499
++ + ++A +L +P +I +D D D+
Sbjct: 631 MICGYCSLKIFSKAIKLFEVLKCGRTQPNAITFTILIDAYCKDGRMDD 678
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 86/394 (21%), Positives = 173/394 (43%), Gaps = 35/394 (8%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + + +LI + G +A V + K+G PSV+++++L++ + + ++ ++
Sbjct: 379 NVVTYSILINGLCRNGRVLEACGVFGQILKQGLEPSVLTYSSLIDGFCKSENLRDGFGLY 438
Query: 155 RRMQSSGPRPSALTYQII-------------LKLFVEANK--FKEAEEVFMTLLD----- 194
M G P + ++ L+ F +A K +F L+D
Sbjct: 439 GIMLRKGHVPDVVVCSMLINGLSRQGMMDEALRFFFQAVKRGLTLNNYLFNALIDGCFRL 498
Query: 195 -EEKSPLK-----------PDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTY 242
+ LK PD + +++ + G ++A LF + ++G + Y
Sbjct: 499 KRTRDGLKMYILMGMYKVIPDVVTYTVLVKGLAEQGRLDEALALFFQLLKKGFSPDHIIY 558
Query: 243 NSLMSFETNYKEVS---KIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLD 299
+L+ ++ + +I+ MQ G+ PD+ Y +LIN + + E L + E++
Sbjct: 559 CTLIDGFCKKRDPATGLQIFKLMQSNGIFPDICIYNVLINMFFREGCVENVLELLREIIK 618
Query: 300 AGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEG 359
G+ P YN ++ + + +A +F+ ++ R P+ ++T ++ AY M+
Sbjct: 619 YGLEPDIVTYNTMICGYCSLKIFSKAIKLFEVLKCGRTQPNAITFTILIDAYCKDGRMDD 678
Query: 360 AEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMD 419
A F + + G PN++TY LI GY K N E E+Y+KM + + PN ++ ++D
Sbjct: 679 AMLIFSSMLERGPEPNILTYSCLIDGYFKTENTESAFELYEKMLGDRVSPNIVSYSILID 738
Query: 420 AYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILL 453
K + A + ++ PD A IL+
Sbjct: 739 GLCKKGLMEEASLAFQCAIGRHLLPDVIAYGILI 772
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 77/338 (22%), Positives = 159/338 (47%), Gaps = 13/338 (3%)
Query: 120 SFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEA 179
SF N G PS V ++ L+ Y R G A F M G S +L L +++
Sbjct: 131 SFRNY-GSNPSTV-YSFLLHCYCRNGMVDRAVDTFAWMSKMGVSISHYAASEMLDLLIDS 188
Query: 180 NKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQST 239
++ + ++ E + ++ + + K G EK + ERG+
Sbjct: 189 DR--------IDVILENYEEMCKGLGVYEFVFNSFLKRGEVEKGLNFHRALVERGLVPKI 240
Query: 240 VTYNSLMSFETNYKEV---SKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEE 296
V N ++ ++ S +D M R+G P++V+++ LIN Y K R +EA +++
Sbjct: 241 VDCNKILKGLCMGNQIGVASDFFDMMVRSGPSPNLVTFSTLINVYCKELRLDEAFSLYNL 300
Query: 297 MLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASD 356
M++ G+ P Y+IL++ +G +++ ++F D+ +++++ AYV D
Sbjct: 301 MIEKGIVPDLVIYSILINGLFRAGKLEEGNSLFSMALARGVKMDVVIFSSIMDAYVRVGD 360
Query: 357 MEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTT 416
+ A + + R+ ++G PNV+TY LI G + + + ++ ++ G++P+ +++
Sbjct: 361 LGKAIEVYTRMLKEGISPNVVTYSILINGLCRNGRVLEACGVFGQILKQGLEPSVLTYSS 420
Query: 417 IMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLS 454
++D + K+++ Y M G PD ++L++
Sbjct: 421 LIDGFCKSENLRDGFGLYGIMLRKGHVPDVVVCSMLIN 458
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/242 (22%), Positives = 104/242 (42%), Gaps = 6/242 (2%)
Query: 228 ALMAERGVQQSTVTYNSLMSFETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARRE 287
L+ R +T ++ ++ N + + + + + G P V Y+ L++ Y +
Sbjct: 98 VLLRHRMFDPATRVFDRMVGQFGNLEVLGEFHGSFRNYGSNPSTV-YSFLLHCYCRNGMV 156
Query: 288 EEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTM 347
+ A+ F M GV +H A + +LD S +D ++ M + + Y +
Sbjct: 157 DRAVDTFAWMSKMGVSISHYAASEMLDLLIDSDRIDVILENYEEMCKG-----LGVYEFV 211
Query: 348 LSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGI 407
++++ ++E F R L + G VP ++ ++KG N + + +D M +G
Sbjct: 212 FNSFLKRGEVEKGLNFHRALVERGLVPKIVDCNKILKGLCMGNQIGVASDFFDMMVRSGP 271
Query: 408 KPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANE 467
PN F+T+++ Y K D A Y M G PD +IL++ A + E N
Sbjct: 272 SPNLVTFSTLINVYCKELRLDEAFSLYNLMIEKGIVPDLVIYSILINGLFRAGKLEEGNS 331
Query: 468 LL 469
L
Sbjct: 332 LF 333
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 78/167 (46%), Gaps = 7/167 (4%)
Query: 70 LKQLKKWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAP 129
LK K + EVL+ R Q N + F +LI AY K G + A + S M ++G P
Sbjct: 638 LKIFSKAIKLFEVLKCGRTQP----NAITFTILIDAYCKDGRMDDAMLIFSSMLERGPEP 693
Query: 130 SVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVF 189
++++++ L++ Y + ++A ++ +M P+ ++Y I++ + +EA F
Sbjct: 694 NILTYSCLIDGYFKTENTESAFELYEKMLGDRVSPNIVSYSILIDGLCKKGLMEEASLAF 753
Query: 190 MTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQ 236
+ L PD + ++I Y K G +A L+ M G+
Sbjct: 754 QCAIGRH---LLPDVIAYGILIRGYCKVGRLAEAMMLYDHMLVNGIM 797
>gi|147862640|emb|CAN81487.1| hypothetical protein VITISV_033285 [Vitis vinifera]
Length = 1024
Score = 166 bits (420), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 121/473 (25%), Positives = 215/473 (45%), Gaps = 18/473 (3%)
Query: 8 KFMQKRRKVEVFKDAADEAGKKNWRRLMNQIE------EVGSAVAVLRSERTRGQPLPKD 61
KF + + E+ K K N R IE +G A+ +L E + +P
Sbjct: 380 KFGKMEKAAEILKGMVTLGCKPNSRTFCLLIEGYCREHNMGRALELL-DEMEKRNLVPSA 438
Query: 62 LVLGTLVR-LKQLKKWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLS 120
+ G ++ L K ++ +++LE + S N + + +LI AY +G +A ++L
Sbjct: 439 VSYGAMINGLCHCKDLSLANKLLEKMTF-SGLKPNVVVYSILIMAYASEGRIEEARRLLD 497
Query: 121 FMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEAN 180
M+ G AP + + A++ + G+ + A +Q G +P A+T+ + + +
Sbjct: 498 GMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAFILGYSKTG 557
Query: 181 KFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKA----RKLFALMAERGVQ 236
K EA + F +LD L P+ ++ ++I + KAG +A R+L AL VQ
Sbjct: 558 KMTEAAKYFDEMLDH---GLMPNNPLYTVLINGHFKAGNLMEALSIFRRLHALGVLPDVQ 614
Query: 237 QSTVTYNSLMSFETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEE 296
+ + L+ +E K++ +++ GL PDV +Y+ LI+ + K E+A + +E
Sbjct: 615 TCSAFIHGLLK-NGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDE 673
Query: 297 MLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASD 356
M G+ P YN L+D SG + +AR +F M PD +Y+TM+ Y + +
Sbjct: 674 MCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSEN 733
Query: 357 MEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTT 416
+ A F + G P+ Y L+ G K ++EK M ++ +M G + F T
Sbjct: 734 VAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGFATTLS-FNT 792
Query: 417 IMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELL 469
++D Y K+ A ++EM + PD ++ A + EAN L
Sbjct: 793 LIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLF 845
Score = 159 bits (401), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 104/375 (27%), Positives = 176/375 (46%), Gaps = 12/375 (3%)
Query: 79 VSEVLEW--LRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTA 136
+ EVL + + N + + +LI K G KA ++L M G P+ +
Sbjct: 349 IDEVLRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMVTLGCKPNSRTFCL 408
Query: 137 LMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVF--MTLLD 194
L+E Y R A + M+ PSA++Y ++ A ++ MT
Sbjct: 409 LIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTF-- 466
Query: 195 EEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETN--- 251
S LKP+ ++ ++I Y G E+AR+L M+ GV YN+++S +
Sbjct: 467 ---SGLKPNVVVYSILIMAYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGK 523
Query: 252 YKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNI 311
+E S ++Q GL+PD V++ I Y K + EA F+EMLD G+ P + Y +
Sbjct: 524 MEEASTYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTV 583
Query: 312 LLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDG 371
L++ +G + +A ++F+ + PD+ + + + + ++ A K F LK+ G
Sbjct: 584 LINGHFKAGNLMEALSIFRRLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKG 643
Query: 372 FVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAV 431
VP+V TY +LI G+ K +EK E++D+M + GI PN I+ ++D K+ D A
Sbjct: 644 LVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRAR 703
Query: 432 VWYKEMESCGFPPDQ 446
+ M G PD
Sbjct: 704 KLFDGMPEKGLEPDS 718
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 99/412 (24%), Positives = 184/412 (44%), Gaps = 41/412 (9%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
NE + ++I + GD ++A ++ M +KG P+ ++T + R R A+ F
Sbjct: 262 NEFIYSLVIEGMCQVGDIDEAVELKRSMGEKGLVPNTYTYTIITAGLCRAKRMNEAKLTF 321
Query: 155 RRMQSSGPRP-----SAL------------------------------TYQIILKLFVEA 179
MQ +G +P SAL TY +++ +
Sbjct: 322 EEMQKTGLKPDYNACSALIDGFMREGDIDEVLRIKDVMVSCGIPINLITYNVLIHGLCKF 381
Query: 180 NKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQST 239
K ++A E+ ++ KP+ + F ++I Y + +A +L M +R + S
Sbjct: 382 GKMEKAAEILKGMV---TLGCKPNSRTFCLLIEGYCREHNMGRALELLDEMEKRNLVPSA 438
Query: 240 VTYNSLMSFETNYKEVS---KIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEE 296
V+Y ++++ + K++S K+ ++M +GL+P+VV Y++LI AY R EEA + +
Sbjct: 439 VSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSILIMAYASEGRIEEARRLLDG 498
Query: 297 MLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASD 356
M +GV P YN ++ + +G +++A T ++ PD ++ + Y
Sbjct: 499 MSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAFILGYSKTGK 558
Query: 357 MEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTT 416
M A K+F + G +PN Y LI G+ K NL + + I+ ++ G+ P+ +
Sbjct: 559 MTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRRLHALGVLPDVQTCSA 618
Query: 417 IMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANEL 468
+ KN A+ + E++ G PD + L+S E +A EL
Sbjct: 619 FIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFEL 670
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 99/396 (25%), Positives = 180/396 (45%), Gaps = 8/396 (2%)
Query: 108 KQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSAL 167
K G +A KV S + +KG P V ++++L+ + + G + A + M G P+
Sbjct: 625 KNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIF 684
Query: 168 TYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLF 227
Y ++ ++ + A ++F + EK L+PD + MI Y K+ +A LF
Sbjct: 685 IYNALVDGLCKSGDIQRARKLFDGM--PEKG-LEPDSVTYSTMIDGYCKSENVAEAFSLF 741
Query: 228 ALMAERGVQQSTVTYNSLM---SFETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKA 284
M +GVQ + YN+L+ E + ++ ++ +M + G +S+ LI+ Y K+
Sbjct: 742 HEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGF-ATTLSFNTLIDGYCKS 800
Query: 285 RREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSY 344
+ +EA +F+EM+ + P H Y ++D +G +++A +FK M+ D +Y
Sbjct: 801 CKIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVTY 860
Query: 345 TTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRV 404
T+++ Y F ++ G P+ +TYG +I + K +NL + ++ D++
Sbjct: 861 TSLMYGYNKLGQSSEVFALFEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVVG 920
Query: 405 NGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNE 464
G+ TI ++ A K +D A EM G P A N L+ A + +E
Sbjct: 921 KGMLTKGTIHDLLITALCKREDLTEASKLLDEMGELGLKPSLAACNTLVRSFHEAGKMDE 980
Query: 465 ANELLGNFNHPNNEPGINGLSISVDEEDDDDDDDED 500
A + P L I + + +D D ED
Sbjct: 981 ATRVFEGVKSLGLVPDTTTL-IDLVNGNLNDTDSED 1015
Score = 121 bits (304), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 84/396 (21%), Positives = 181/396 (45%), Gaps = 8/396 (2%)
Query: 77 NVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTA 136
+++ VL W R ++ + + F +LI +Y + G ++A V S++ +
Sbjct: 141 SILDSVLFWFR--NYGGSSPVVFDILIDSYKRMGMLDEAANVFFVAKNDSILISLIRCNS 198
Query: 137 LMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEE 196
L++ + G + ++ M + TY ++ + + A+ V L++ +
Sbjct: 199 LLKDLLKCGMMELFWKVYNGMLDAKMGFDVYTYTYLVGALCKTGDLRGAKRV---LIEMD 255
Query: 197 KSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYK--- 253
+ L P++ ++ ++I + G ++A +L M E+G+ +T TY + + K
Sbjct: 256 EKGLNPNEFIYSLVIEGMCQVGDIDEAVELKRSMGEKGLVPNTYTYTIITAGLCRAKRMN 315
Query: 254 EVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILL 313
E +++MQ+ GL+PD + + LI+ + + +E L + + M+ G+ YN+L+
Sbjct: 316 EAKLTFEEMQKTGLKPDYNACSALIDGFMREGDIDEVLRIKDVMVSCGIPINLITYNVLI 375
Query: 314 DAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFV 373
G +++A + K M C P+ ++ ++ Y +M A + +++ V
Sbjct: 376 HGLCKFGKMEKAAEILKGMVTLGCKPNSRTFCLLIEGYCREHNMGRALELLDEMEKRNLV 435
Query: 374 PNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVW 433
P+ ++YG +I G +L ++ +KM +G+KPN +++ ++ AY + A
Sbjct: 436 PSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSILIMAYASEGRIEEARRL 495
Query: 434 YKEMESCGFPPDQKAKNILLSLAKTADERNEANELL 469
M G PD N ++S A + EA+ L
Sbjct: 496 LDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYL 531
Score = 98.6 bits (244), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 79/338 (23%), Positives = 147/338 (43%), Gaps = 75/338 (22%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
L+ K GD +A K+ M +KG P V+++ +++ Y + A ++F M S G
Sbjct: 689 LVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKG 748
Query: 162 PRP----------------------------------SALTYQIILKLFVEANKFKEAEE 187
+P + L++ ++ + ++ K +EA +
Sbjct: 749 VQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGFATTLSFNTLIDGYCKSCKIQEASQ 808
Query: 188 VFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMS 247
+F ++ ++ + PD + +I + KAG E+A LF M ER + TVTY SLM
Sbjct: 809 LFQEMIAKQ---IMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVTYTSLMY 865
Query: 248 FETNY---KEVSKIYDQMQRAGLQPDVVSYALLINAYGK--------------------- 283
EV ++++M G++PD V+Y L+I A+ K
Sbjct: 866 GYNKLGQSSEVFALFEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVVGKGMLT 925
Query: 284 ------------ARREE--EALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVF 329
+RE+ EA + +EM + G++P+ A N L+ +F +G +D+A VF
Sbjct: 926 KGTIHDLLITALCKREDLTEASKLLDEMGELGLKPSLAACNTLVRSFHEAGKMDEATRVF 985
Query: 330 KCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRL 367
+ ++ PD + +++ +N +D E A ++L
Sbjct: 986 EGVKSLGLVPDTTTLIDLVNGNLNDTDSEDARNLIKQL 1023
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 83/371 (22%), Positives = 148/371 (39%), Gaps = 43/371 (11%)
Query: 121 FMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEAN 180
F N G +P V L+++Y R G A +F ++ S + +LK ++
Sbjct: 150 FRNYGGSSPVVFD--ILIDSYKRMGMLDEAANVFFVAKNDSILISLIRCNSLLKDLLKCG 207
Query: 181 KFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTV 240
+ +V+ +LD + + D + ++ K G A+++ M E+G+ +
Sbjct: 208 MMELFWKVYNGMLD---AKMGFDVYTYTYLVGALCKTGDLRGAKRVLIEMDEKGLNPNEF 264
Query: 241 TYNSL---MSFETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEM 297
Y+ + M + E ++ M GL P+ +Y ++ +A+R EA FEEM
Sbjct: 265 IYSLVIEGMCQVGDIDEAVELKRSMGEKGLVPNTYTYTIITAGLCRAKRMNEAKLTFEEM 324
Query: 298 LDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDM 357
G++P + A + L+D F G +D+ + +D M+S
Sbjct: 325 QKTGLKPDYNACSALIDGFMREGDIDEVLRI-----KD----------VMVSC------- 362
Query: 358 EGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTI 417
G N+ITY LI G K +EK EI M G KPN F +
Sbjct: 363 -------------GIPINLITYNVLIHGLCKFGKMEKAAEILKGMVTLGCKPNSRTFCLL 409
Query: 418 MDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNN 477
++ Y + + A+ EME P + +++ + + AN+LL
Sbjct: 410 IEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGL 469
Query: 478 EPGINGLSISV 488
+P + SI +
Sbjct: 470 KPNVVVYSILI 480
Score = 55.5 bits (132), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 45/190 (23%), Positives = 86/190 (45%), Gaps = 8/190 (4%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
+ + + +I + K G +A + M ++ V++T+LM Y + G+ A+F
Sbjct: 821 DHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVTYTSLMYGYNKLGQSSEVFALF 880
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFH-MMIYM 213
+M + G +P +TY +++ + + EA L DE + H ++I
Sbjct: 881 EKMVAKGVKPDEVTYGLVIYAHCKEDNLVEA----FKLRDEVVGKGMLTKGTIHDLLITA 936
Query: 214 YKKAGGYEKARKLFALMAERGVQQSTVTYNSLM-SFETNYK--EVSKIYDQMQRAGLQPD 270
K +A KL M E G++ S N+L+ SF K E +++++ ++ GL PD
Sbjct: 937 LCKREDLTEASKLLDEMGELGLKPSLAACNTLVRSFHEAGKMDEATRVFEGVKSLGLVPD 996
Query: 271 VVSYALLINA 280
+ L+N
Sbjct: 997 TTTLIDLVNG 1006
>gi|10177016|dbj|BAB10204.1| maize crp1 protein-like [Arabidopsis thaliana]
Length = 680
Score = 166 bits (420), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 108/425 (25%), Positives = 208/425 (48%), Gaps = 14/425 (3%)
Query: 36 NQIEEVGSAVAVLRSERTRGQPLPKDLVLGTLVRLKQLKKWNVVSEVLEWLRIQSWWDFN 95
N IE+ + +A +R + + + LV+ +L R ++ ++ E R D
Sbjct: 182 NDIEKALNLIAKMRQDGYQSDFVNYSLVIQSLTRSNKIDSVMLLRLYKEIER-----DKL 236
Query: 96 EMDFLM---LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEA 152
E+D + +I + K GD +KA ++L G + + +++ A GR AEA
Sbjct: 237 ELDVQLVNDIIMGFAKSGDPSKALQLLGMAQATGLSAKTATLVSIISALADSGRTLEAEA 296
Query: 153 IFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIY 212
+F ++ SG +P Y +LK +V+ K+AE + + EK + PD+ + ++I
Sbjct: 297 LFEELRQSGIKPRTRAYNALLKGYVKTGPLKDAESMVSEM---EKRGVSPDEHTYSLLID 353
Query: 213 MYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSF---ETNYKEVSKIYDQMQRAGLQP 269
Y AG +E AR + M VQ ++ ++ L++ +++ ++ +M+ G++P
Sbjct: 354 AYVNAGRWESARIVLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSIGVKP 413
Query: 270 DVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVF 329
D Y ++I+ +GK + A+ F+ ML G+ P +N L+D G A +F
Sbjct: 414 DRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMF 473
Query: 330 KCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKV 389
+ M R C P +Y M+++Y + + ++ ++K G +PNV+T+ TL+ Y K
Sbjct: 474 EAMERRGCLPCATTYNIMINSYGDQERWDDMKRLLGKMKSQGILPNVVTHTTLVDVYGKS 533
Query: 390 NNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAK 449
+E ++M+ G+KP+ T++ +++AY + + AV ++ M S G P A
Sbjct: 534 GRFNDAIECLEEMKSVGLKPSSTMYNALINAYAQRGLSEQAVNAFRVMTSDGLKPSLLAL 593
Query: 450 NILLS 454
N L++
Sbjct: 594 NSLIN 598
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 90/356 (25%), Positives = 175/356 (49%), Gaps = 6/356 (1%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
L+ Y K G AE ++S M K+G +P +++ L++AY GR+++A + + M++
Sbjct: 316 LLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTYSLLIDAYVNAGRWESARIVLKEMEAGD 375
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
+P++ + +L F + E ++ F L + + +KPD++ ++++I + K +
Sbjct: 376 VQPNSFVFSRLLAGFRDRG---EWQKTFQVLKEMKSIGVKPDRQFYNVVIDTFGKFNCLD 432
Query: 222 KARKLFALMAERGVQQSTVTYNSLMSFETNYKE---VSKIYDQMQRAGLQPDVVSYALLI 278
A F M G++ VT+N+L+ + ++++ M+R G P +Y ++I
Sbjct: 433 HAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMERRGCLPCATTYNIMI 492
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCS 338
N+YG R ++ + +M G+ P + L+D + SG + A + M+
Sbjct: 493 NSYGDQERWDDMKRLLGKMKSQGILPNVVTHTTLVDVYGKSGRFNDAIECLEEMKSVGLK 552
Query: 339 PDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEI 398
P Y +++AY E A FR + DG P+++ +LI + + + +
Sbjct: 553 PSSTMYNALINAYAQRGLSEQAVNAFRVMTSDGLKPSLLALNSLINAFGEDRRDAEAFAV 612
Query: 399 YDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLS 454
M+ NG+KP+ +TT+M A + F V Y+EM G PD+KA+++L S
Sbjct: 613 LQYMKENGVKPDVVTYTTLMKALIRVDKFQKVPVVYEEMIMSGCKPDRKARSMLRS 668
Score = 122 bits (305), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 103/447 (23%), Positives = 186/447 (41%), Gaps = 81/447 (18%)
Query: 82 VLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAY 141
V+ WL+ + E+ + +LI A G+ +A F+ + + +++ AL+ A
Sbjct: 124 VVSWLQKHNLCFSYELLYSILIHALGRSEKLYEA-----FLLSQKQTLTPLTYNALIGAC 178
Query: 142 GRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDE-EKSPL 200
R + A + +M+ G + + Y ++++ +NK + + L E E+ L
Sbjct: 179 ARNNDIEKALNLIAKMRQDGYQSDFVNYSLVIQSLTRSNKIDSV--MLLRLYKEIERDKL 236
Query: 201 KPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMS------------- 247
+ D ++ + +I + K+G KA +L + G+ T T S++S
Sbjct: 237 ELDVQLVNDIIMGFAKSGDPSKALQLLGMAQATGLSAKTATLVSIISALADSGRTLEAEA 296
Query: 248 -FE----TNYKEVSKIYD--------------------QMQRAGLQPDVVSYALLINAYG 282
FE + K ++ Y+ +M++ G+ PD +Y+LLI+AY
Sbjct: 297 LFEELRQSGIKPRTRAYNALLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTYSLLIDAYV 356
Query: 283 KARREEEA-----------------------------------LAVFEEMLDAGVRPTHK 307
A R E A V +EM GV+P +
Sbjct: 357 NAGRWESARIVLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSIGVKPDRQ 416
Query: 308 AYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRL 367
YN+++D F +D A T F M + PD ++ T++ + AE+ F +
Sbjct: 417 FYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAM 476
Query: 368 KQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDF 427
++ G +P TY +I Y + M + KM+ GI PN TT++D YGK+ F
Sbjct: 477 ERRGCLPCATTYNIMINSYGDQERWDDMKRLLGKMKSQGILPNVVTHTTLVDVYGKSGRF 536
Query: 428 DSAVVWYKEMESCGFPPDQKAKNILLS 454
+ A+ +EM+S G P N L++
Sbjct: 537 NDAIECLEEMKSVGLKPSSTMYNALIN 563
Score = 88.6 bits (218), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 63/244 (25%), Positives = 116/244 (47%), Gaps = 8/244 (3%)
Query: 101 MLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSS 160
++I +GK + A M +G P V+ L++ + + GR+ AE +F M+
Sbjct: 420 VVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMERR 479
Query: 161 GPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSP-LKPDQKMFHMMIYMYKKAGG 219
G P A TY I++ + + ++ + + LL + KS + P+ ++ +Y K+G
Sbjct: 480 GCLPCATTYNIMINSYGDQERWDDMKR----LLGKMKSQGILPNVVTHTTLVDVYGKSGR 535
Query: 220 YEKARKLFALMAERGVQQSTVTYNSLMSFETN---YKEVSKIYDQMQRAGLQPDVVSYAL 276
+ A + M G++ S+ YN+L++ ++ + M GL+P +++
Sbjct: 536 FNDAIECLEEMKSVGLKPSSTMYNALINAYAQRGLSEQAVNAFRVMTSDGLKPSLLALNS 595
Query: 277 LINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDR 336
LINA+G+ RR+ EA AV + M + GV+P Y L+ A + V++ M
Sbjct: 596 LINAFGEDRRDAEAFAVLQYMKENGVKPDVVTYTTLMKALIRVDKFQKVPVVYEEMIMSG 655
Query: 337 CSPD 340
C PD
Sbjct: 656 CKPD 659
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 78/189 (41%), Gaps = 41/189 (21%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + L+ YGK G FN A + L M G PS + AL+ AY + G + A F
Sbjct: 519 NVVTHTTLVDVYGKSGRFNDAIECLEEMKSVGLKPSSTMYNALINAYAQRGLSEQAVNAF 578
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
R M S G +PS L ++ F E + D + F ++ Y
Sbjct: 579 RVMTSDGLKPSLLALNSLINAFGEDRR---------------------DAEAFAVLQY-- 615
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFET---NYKEVSKIYDQMQRAGLQPDV 271
M E GV+ VTY +LM +++V +Y++M +G +PD
Sbjct: 616 ---------------MKENGVKPDVVTYTTLMKALIRVDKFQKVPVVYEEMIMSGCKPDR 660
Query: 272 VSYALLINA 280
+ ++L +A
Sbjct: 661 KARSMLRSA 669
>gi|449438681|ref|XP_004137116.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39710-like [Cucumis sativus]
Length = 749
Score = 166 bits (420), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 113/438 (25%), Positives = 208/438 (47%), Gaps = 9/438 (2%)
Query: 35 MNQIEEVGSAVAVLRSERTRGQPLPKDLVLGTLVRLKQLKKWNVVSEVLEWLRIQSWWDF 94
+N I + S V + +S L + +L ++R KQ K ++E + ++S
Sbjct: 145 VNLINKALSIVNLAKSYGFMPGVLSYNAILDAVIRTKQSVK---IAEGIFKEMVESGVSP 201
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + +LI + G+ M + G P+VV++ +++AY + + A +
Sbjct: 202 NVYTYNILIRGFCTAGNLEMGLFFFGEMERNGCLPNVVTYNTIIDAYCKLRKIGEAFKLL 261
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
R M G P+ ++Y +++ + KE E+ L + K PD+ F+ +I Y
Sbjct: 262 RLMALKGLNPNLISYNVVINGLCREGQMKETSEI---LEEMSKRRYVPDRVTFNTLINGY 318
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSL---MSFETNYKEVSKIYDQMQRAGLQPDV 271
G + +A L A M + G+ + VTY +L M N + DQM+ GL P+
Sbjct: 319 CNVGNFHQALVLHAEMVKNGLSPNVVTYTTLINSMCKAGNLNRAMEFLDQMRDRGLHPNG 378
Query: 272 VSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKC 331
+Y LI+ + + ++A + +EM++ G PT YN L++ I G ++ A + +
Sbjct: 379 RTYTTLIDGFSQQGFLKQAYQIMKEMVENGFTPTIITYNALINGHCILGRMEDASGLLQE 438
Query: 332 MRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNN 391
M PD+ SY+T++S + ++E A + + G P+V TY +LI+G K
Sbjct: 439 MIERGFIPDVVSYSTIISGFCRNQELEKAFQLKVEMVAKGISPDVATYSSLIQGLCKQRR 498
Query: 392 LEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNI 451
L ++ +++ +M G+ P++ +T++++AY D D A+ + EM GF PD N+
Sbjct: 499 LGEVCDLFQEMLSLGLPPDEVTYTSLINAYCIEGDLDKALRLHDEMIQKGFSPDIVTYNV 558
Query: 452 LLSLAKTADERNEANELL 469
L++ EA LL
Sbjct: 559 LINGFNKQSRTKEAKRLL 576
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 98/387 (25%), Positives = 183/387 (47%), Gaps = 42/387 (10%)
Query: 99 FLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGR-YKNAEAIFRRM 157
F +++ + + NKA +++ G+ P V+S+ A+++A R + K AE IF+ M
Sbjct: 135 FDLVVKSCARVNLINKALSIVNLAKSYGFMPGVLSYNAILDAVIRTKQSVKIAEGIFKEM 194
Query: 158 QSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKA 217
SG P+ TY I+++ F A + F + E++ P+ ++ +I Y K
Sbjct: 195 VESGVSPNVYTYNILIRGFCTAGNLEMGLFFFGEM---ERNGCLPNVVTYNTIIDAYCKL 251
Query: 218 GGYEKARKLFALMAERGVQQSTVTYNSLM-----------------------------SF 248
+A KL LMA +G+ + ++YN ++ +F
Sbjct: 252 RKIGEAFKLLRLMALKGLNPNLISYNVVINGLCREGQMKETSEILEEMSKRRYVPDRVTF 311
Query: 249 ET---------NYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLD 299
T N+ + ++ +M + GL P+VV+Y LIN+ KA A+ ++M D
Sbjct: 312 NTLINGYCNVGNFHQALVLHAEMVKNGLSPNVVTYTTLINSMCKAGNLNRAMEFLDQMRD 371
Query: 300 AGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEG 359
G+ P + Y L+D F+ G + QA + K M + +P I +Y +++ + ME
Sbjct: 372 RGLHPNGRTYTTLIDGFSQQGFLKQAYQIMKEMVENGFTPTIITYNALINGHCILGRMED 431
Query: 360 AEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMD 419
A + + + GF+P+V++Y T+I G+ + LEK ++ +M GI P+ +++++
Sbjct: 432 ASGLLQEMIERGFIPDVVSYSTIISGFCRNQELEKAFQLKVEMVAKGISPDVATYSSLIQ 491
Query: 420 AYGKNKDFDSAVVWYKEMESCGFPPDQ 446
K + ++EM S G PPD+
Sbjct: 492 GLCKQRRLGEVCDLFQEMLSLGLPPDE 518
Score = 155 bits (391), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 120/457 (26%), Positives = 216/457 (47%), Gaps = 34/457 (7%)
Query: 37 QIEEVGSAVAVLRSERTRG---QPLPKDLVLGTLVRLKQLKKWNVVSEVLEWLRIQSWWD 93
++ ++G A +LR +G + ++V+ L R Q+K+ SE+LE + + +
Sbjct: 250 KLRKIGEAFKLLRLMALKGLNPNLISYNVVINGLCREGQMKE---TSEILEEMSKRRYVP 306
Query: 94 FNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAI 153
+ + F LI Y G+F++A + + M K G +P+VV++T L+ + + G A
Sbjct: 307 -DRVTFNTLINGYCNVGNFHQALVLHAEMVKNGLSPNVVTYTTLINSMCKAGNLNRAMEF 365
Query: 154 FRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYM 213
+M+ G P+ TY ++ F + K+A ++ +++ + P ++ +I
Sbjct: 366 LDQMRDRGLHPNGRTYTTLIDGFSQQGFLKQAYQIMKEMVE---NGFTPTIITYNALING 422
Query: 214 YKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSKIYD---QMQRAGLQPD 270
+ G E A L M ERG V+Y++++S +E+ K + +M G+ PD
Sbjct: 423 HCILGRMEDASGLLQEMIERGFIPDVVSYSTIISGFCRNQELEKAFQLKVEMVAKGISPD 482
Query: 271 VVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFK 330
V +Y+ LI K RR E +F+EML G+ P Y L++A+ I G +D+A +
Sbjct: 483 VATYSSLIQGLCKQRRLGEVCDLFQEMLSLGLPPDEVTYTSLINAYCIEGDLDKALRLHD 542
Query: 331 CMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLI------- 383
M + SPDI +Y +++ + S + A++ +L + VPN ITY TLI
Sbjct: 543 EMIQKGFSPDIVTYNVLINGFNKQSRTKEAKRLLLKLLYEESVPNEITYNTLIDNCNNLE 602
Query: 384 --------KGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYK 435
KG+ + + + + M G K N+ ++ I+ + K + + A YK
Sbjct: 603 FKSALALMKGFCMKGLMNEADRVLESMLQKGYKLNEEVYNVIIHGHSKVGNIEKAYNLYK 662
Query: 436 EMESCGFPPDQKAKNILLSLAKTADERN---EANELL 469
EM GF P +++LAK+ E N+LL
Sbjct: 663 EMLHSGFAPHSVT---IMALAKSLYHEGKEVELNQLL 696
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 92/391 (23%), Positives = 181/391 (46%), Gaps = 13/391 (3%)
Query: 51 ERTRGQPLPKDLVLGTLVRLKQLKKWNVVSEVLEWLRIQSWWDFNE--MDFLMLITAYGK 108
E R LP + T++ K + E + LR+ + N + + ++I +
Sbjct: 228 EMERNGCLPNVVTYNTII--DAYCKLRKIGEAFKLLRLMALKGLNPNLISYNVVINGLCR 285
Query: 109 QGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALT 168
+G + ++L M+K+ Y P V+ L+ Y G + A + M +G P+ +T
Sbjct: 286 EGQMKETSEILEEMSKRRYVPDRVTFNTLINGYCNVGNFHQALVLHAEMVKNGLSPNVVT 345
Query: 169 YQIILKLFVEANKFKEAEEVFMTLLDEEK-SPLKPDQKMFHMMIYMYKKAGGYEKARKLF 227
Y ++ +A A M LD+ + L P+ + + +I + + G ++A ++
Sbjct: 346 YTTLINSMCKAGNLNRA----MEFLDQMRDRGLHPNGRTYTTLIDGFSQQGFLKQAYQIM 401
Query: 228 ALMAERGVQQSTVTYNSLMSFET---NYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKA 284
M E G + +TYN+L++ ++ S + +M G PDVVSY+ +I+ + +
Sbjct: 402 KEMVENGFTPTIITYNALINGHCILGRMEDASGLLQEMIERGFIPDVVSYSTIISGFCRN 461
Query: 285 RREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSY 344
+ E+A + EM+ G+ P Y+ L+ + + +F+ M PD +Y
Sbjct: 462 QELEKAFQLKVEMVAKGISPDVATYSSLIQGLCKQRRLGEVCDLFQEMLSLGLPPDEVTY 521
Query: 345 TTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRV 404
T++++AY D++ A + + Q GF P+++TY LI G+ K + ++ + K+
Sbjct: 522 TSLINAYCIEGDLDKALRLHDEMIQKGFSPDIVTYNVLINGFNKQSRTKEAKRLLLKLLY 581
Query: 405 NGIKPNQTIFTTIMDAYGKNKDFDSAVVWYK 435
PN+ + T++D N +F SA+ K
Sbjct: 582 EESVPNEITYNTLIDN-CNNLEFKSALALMK 611
>gi|15242446|ref|NP_198787.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75170916|sp|Q9FIX3.1|PP407_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g39710; AltName: Full=Protein EMBRYO DEFECTIVE 2745
gi|10177971|dbj|BAB11377.1| unnamed protein product [Arabidopsis thaliana]
gi|332007083|gb|AED94466.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 747
Score = 166 bits (420), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 116/457 (25%), Positives = 218/457 (47%), Gaps = 14/457 (3%)
Query: 29 KNWRRLMNQIEEVGSAVAVLRSERTRGQPLPKDLVLGTLVRLKQLKKW--NVVSEVLEWL 86
K++ RL + I++ S V + ++ L + VL +R K+ + NV E+LE
Sbjct: 142 KSYSRL-SLIDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISFAENVFKEMLESQ 200
Query: 87 RIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGR 146
+ + +N +LI + G+ + A + M KG P+VV++ L++ Y + +
Sbjct: 201 VSPNVFTYN-----ILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRK 255
Query: 147 YKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKM 206
+ + R M G P+ ++Y +++ + KE V L + + D+
Sbjct: 256 IDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKE---VSFVLTEMNRRGYSLDEVT 312
Query: 207 FHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSL---MSFETNYKEVSKIYDQMQ 263
++ +I Y K G + +A + A M G+ S +TY SL M N + DQM+
Sbjct: 313 YNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMR 372
Query: 264 RAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVD 323
GL P+ +Y L++ + + EA V EM D G P+ YN L++ ++G ++
Sbjct: 373 VRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKME 432
Query: 324 QARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLI 383
A V + M+ SPD+ SY+T+LS + + D++ A + R + + G P+ ITY +LI
Sbjct: 433 DAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLI 492
Query: 384 KGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFP 443
+G+ + ++ ++Y++M G+ P++ +T +++AY D + A+ + EM G
Sbjct: 493 QGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVL 552
Query: 444 PDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPG 480
PD ++L++ EA LL + + P
Sbjct: 553 PDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPS 589
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 109/453 (24%), Positives = 216/453 (47%), Gaps = 31/453 (6%)
Query: 37 QIEEVGSAVAVLRSERTRG-QP--LPKDLVLGTLVRLKQLKKWNVVSEVLEWLRIQSWWD 93
++ ++ +LRS +G +P + ++V+ L R ++K+ VS VL + + +
Sbjct: 252 KLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKE---VSFVLTEMN-RRGYS 307
Query: 94 FNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAI 153
+E+ + LI Y K+G+F++A + + M + G PSV+++T+L+ + + G A
Sbjct: 308 LDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEF 367
Query: 154 FRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYM 213
+M+ G P+ TY ++ F + EA V + D + P ++ +I
Sbjct: 368 LDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMND---NGFSPSVVTYNALING 424
Query: 214 YKKAGGYEKARKLFALMAERGVQQSTVTYNSLMS-FETNYK--EVSKIYDQMQRAGLQPD 270
+ G E A + M E+G+ V+Y++++S F +Y E ++ +M G++PD
Sbjct: 425 HCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPD 484
Query: 271 VVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFK 330
++Y+ LI + + RR +EA ++EEML G+ P Y L++A+ + G +++A +
Sbjct: 485 TITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHN 544
Query: 331 CMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLI------- 383
M PD+ +Y+ +++ S A++ +L + VP+ +TY TLI
Sbjct: 545 EMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIE 604
Query: 384 --------KGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYK 435
KG+ + + ++++ M KP+ T + ++ + + D A YK
Sbjct: 605 FKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYK 664
Query: 436 EMESCGFPPDQKAKNILLSLAKTADERNEANEL 468
EM GF +++L K + + NEL
Sbjct: 665 EMVKSGFLLHTVT---VIALVKALHKEGKVNEL 694
Score = 125 bits (315), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 90/372 (24%), Positives = 175/372 (47%), Gaps = 26/372 (6%)
Query: 47 VLRSERTRGQPLPKDLVLGTLVR-LKQLKKWNVVSEVLEWLRIQSWWDFNEMDFLMLITA 105
V+ +E R P + +L+ + + N E L+ +R++ NE + L+
Sbjct: 331 VMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCP-NERTYTTLVDG 389
Query: 106 YGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPS 165
+ ++G N+A +VL MN G++PSVV++ AL+ + G+ ++A A+ M+ G P
Sbjct: 390 FSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPD 449
Query: 166 ALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARK 225
++Y +L F + EA V ++++ +KPD + +I + + ++A
Sbjct: 450 VVSYSTVLSGFCRSYDVDEALRVKREMVEK---GIKPDTITYSSLIQGFCEQRRTKEACD 506
Query: 226 LFALMAERGVQQSTVTYNSLM---SFETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYG 282
L+ M G+ TY +L+ E + ++ +++++M G+ PDVV+Y++LIN
Sbjct: 507 LYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLN 566
Query: 283 KARREEEALAVFEEMLDAGVRPTHKAYNILLD---------------AFAISGMVDQART 327
K R EA + ++ P+ Y+ L++ F + GM+ +A
Sbjct: 567 KQSRTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQ 626
Query: 328 VFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGY- 386
VF+ M PD +Y M+ + A D+ A ++ + + GF+ + +T L+K
Sbjct: 627 VFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKSGFLLHTVTVIALVKALH 686
Query: 387 --AKVNNLEKMM 396
KVN L ++
Sbjct: 687 KEGKVNELNSVI 698
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 87/348 (25%), Positives = 152/348 (43%), Gaps = 42/348 (12%)
Query: 137 LMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANK-FKEAEEVFMTLLDE 195
++++Y R A +I Q+ G P L+Y +L + + + AE VF +L+
Sbjct: 140 VVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISFAENVFKEMLES 199
Query: 196 EKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSL---------- 245
+ S P+ ++++I + AG + A LF M +G + VTYN+L
Sbjct: 200 QVS---PNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKI 256
Query: 246 ----------------------------MSFETNYKEVSKIYDQMQRAGLQPDVVSYALL 277
+ E KEVS + +M R G D V+Y L
Sbjct: 257 DDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTL 316
Query: 278 INAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRC 337
I Y K +AL + EML G+ P+ Y L+ + +G +++A MR
Sbjct: 317 IKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGL 376
Query: 338 SPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMME 397
P+ +YTT++ + M A + R + +GF P+V+TY LI G+ +E +
Sbjct: 377 CPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIA 436
Query: 398 IYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPD 445
+ + M+ G+ P+ ++T++ + ++ D D A+ +EM G PD
Sbjct: 437 VLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPD 484
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 69/273 (25%), Positives = 117/273 (42%), Gaps = 43/273 (15%)
Query: 263 QRAGLQPDVVSYALLINAYGKARREEE-ALAVFEEMLDAGVRPTHKAYNILLDAFAISGM 321
Q G P V+SY +++A +++R A VF+EML++ V P YNIL+ F +G
Sbjct: 161 QAHGFMPGVLSYNAVLDATIRSKRNISFAENVFKEMLESQVSPNVFTYNILIRGFCFAGN 220
Query: 322 VDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVI---- 377
+D A T+F M C P++ +Y T++ Y ++ K R + G PN+I
Sbjct: 221 IDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNV 280
Query: 378 -------------------------------TYGTLIKGYAKVNNLEKMMEIYDKMRVNG 406
TY TLIKGY K N + + ++ +M +G
Sbjct: 281 VINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHG 340
Query: 407 IKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEAN 466
+ P+ +T+++ + K + + A+ + +M G P+++ L+ NEA
Sbjct: 341 LTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAY 400
Query: 467 ELLGNFNHPNNEPG-------INGLSISVDEED 492
+L N P ING ++ ED
Sbjct: 401 RVLREMNDNGFSPSVVTYNALINGHCVTGKMED 433
>gi|18424537|ref|NP_568948.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75170898|sp|Q9FIT7.1|PP442_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g61990, mitochondrial; Flags: Precursor
gi|10176917|dbj|BAB10161.1| unnamed protein product [Arabidopsis thaliana]
gi|332010163|gb|AED97546.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 974
Score = 166 bits (420), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 97/349 (27%), Positives = 172/349 (49%), Gaps = 8/349 (2%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
LI Y ++ + + ++L M K+ S ++ +++ G A I + M +SG
Sbjct: 388 LIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASG 447
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSP-LKPDQKMFHMMIYMYKKAGGY 220
RP+ + Y ++K F++ ++F +A M +L E K + PD ++ +I KA
Sbjct: 448 CRPNVVIYTTLIKTFLQNSRFGDA----MRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRM 503
Query: 221 EKARKLFALMAERGVQQSTVTYNSLMSF---ETNYKEVSKIYDQMQRAGLQPDVVSYALL 277
++AR M E G++ + TY + +S + + K +M+ G+ P+ V L
Sbjct: 504 DEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGL 563
Query: 278 INAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRC 337
IN Y K + EA + + M+D G+ K Y +L++ + VD A +F+ MR
Sbjct: 564 INEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGI 623
Query: 338 SPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMME 397
+PD+ SY +++ + +M+ A F + ++G PNVI Y L+ G+ + +EK E
Sbjct: 624 APDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKE 683
Query: 398 IYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQ 446
+ D+M V G+ PN + TI+D Y K+ D A + EM+ G PD
Sbjct: 684 LLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDS 732
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 93/384 (24%), Positives = 170/384 (44%), Gaps = 44/384 (11%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + I+ Y + +F A+K + M + G P+ V T L+ Y + G+ A + +
Sbjct: 521 NAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAY 580
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
R M G A TY +++ + +K +AEE+F + + PD + ++I +
Sbjct: 581 RSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREM---RGKGIAPDVFSYGVLINGF 637
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSK---IYDQMQRAGLQPDV 271
K G +KA +F M E G+ + + YN L+ E+ K + D+M GL P+
Sbjct: 638 SKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNA 697
Query: 272 VSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKC 331
V+Y +I+ Y K+ EA +F+EM G+ P Y L+D V++A T+F
Sbjct: 698 VTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGT 757
Query: 332 MRRDRCS--------------------------------------PDICSYTTMLSAYVN 353
++ S P+ +Y M+
Sbjct: 758 NKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCK 817
Query: 354 ASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTI 413
++E A++ F +++ +P VITY +L+ GY K+ +M ++D+ GI+P+ +
Sbjct: 818 EGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIM 877
Query: 414 FTTIMDAYGKNKDFDSAVVWYKEM 437
++ I++A+ K A+V +M
Sbjct: 878 YSVIINAFLKEGMTTKALVLVDQM 901
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 92/367 (25%), Positives = 165/367 (44%), Gaps = 14/367 (3%)
Query: 29 KNWRRLMNQI---EEVGSAVAVLRSERTRGQPLPKDLVLGTLVR-LKQLKKWNVVSEVLE 84
K + LMN + ++V A + R R +G P G L+ +L S + +
Sbjct: 593 KTYTVLMNGLFKNDKVDDAEEIFREMRGKGIA-PDVFSYGVLINGFSKLGNMQKASSIFD 651
Query: 85 WLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRG 144
+ ++ N + + ML+ + + G+ KA+++L M+ KG P+ V++ +++ Y +
Sbjct: 652 EM-VEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKS 710
Query: 145 GRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQ 204
G A +F M+ G P + Y ++ N + A +F T S P
Sbjct: 711 GDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTNKKGCASSTAPFN 770
Query: 205 KMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSF---ETNYKEVSKIYDQ 261
+ + + K E +L +R + + VTYN ++ + E N + +++ Q
Sbjct: 771 ALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQ 830
Query: 262 MQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGM 321
MQ A L P V++Y L+N Y K R E VF+E + AG+ P H Y+++++AF GM
Sbjct: 831 MQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGM 890
Query: 322 VDQARTVFKCMRR-----DRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNV 376
+A + M D C I + +LS + +ME AEK + + ++P+
Sbjct: 891 TTKALVLVDQMFAKNAVDDGCKLSISTCRALLSGFAKVGEMEVAEKVMENMVRLQYIPDS 950
Query: 377 ITYGTLI 383
T LI
Sbjct: 951 ATVIELI 957
Score = 115 bits (288), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 90/392 (22%), Positives = 169/392 (43%), Gaps = 33/392 (8%)
Query: 69 RLKQLKKWNVVSEVLEWLRIQSWWD-----------FNEMDFLMLITAYGKQGDFNKAEK 117
RL + K ++ +L W R+ +WD F+ + MLI A+ + G+ +
Sbjct: 185 RLSRCKV--LLDALLRWNRLDLFWDVYKGMVERNVVFDVKTYHMLIIAHCRAGNVQLGKD 242
Query: 118 VLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFV 177
VL F +K + TA + G A + M G P TY +++
Sbjct: 243 VL-FKTEKEF------RTATLNVDG-------ALKLKESMICKGLVPLKYTYDVLIDGLC 288
Query: 178 EANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQ 237
+ + ++A+ + L++ + + D + ++I K + A+ L M G+
Sbjct: 289 KIKRLEDAKSL---LVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEMVSHGINI 345
Query: 238 STVTYNS---LMSFETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVF 294
Y+ +MS E ++ ++D M +GL P +YA LI Y + + + +
Sbjct: 346 KPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELL 405
Query: 295 EEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNA 354
EM + + Y ++ SG +D A + K M C P++ YTT++ ++
Sbjct: 406 VEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQN 465
Query: 355 SDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIF 414
S A + + +K+ G P++ Y +LI G +K +++ +M NG+KPN +
Sbjct: 466 SRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTY 525
Query: 415 TTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQ 446
+ Y + +F SA + KEM CG P++
Sbjct: 526 GAFISGYIEASEFASADKYVKEMRECGVLPNK 557
Score = 95.5 bits (236), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 87/358 (24%), Positives = 155/358 (43%), Gaps = 37/358 (10%)
Query: 151 EAIFRRMQSSG----PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKM 206
EA+F S G PR S +++L + N+ +V+ +++ + D K
Sbjct: 169 EAVFVFSSSMGLELVPRLSRC--KVLLDALLRWNRLDLFWDVYKGMVERN---VVFDVKT 223
Query: 207 FHMMIYMYKKAGGYE---------------------KARKLFALMAERGVQQSTVTYNSL 245
+HM+I + +AG + A KL M +G+ TY+ L
Sbjct: 224 YHMLIIAHCRAGNVQLGKDVLFKTEKEFRTATLNVDGALKLKESMICKGLVPLKYTYDVL 283
Query: 246 MSFETNYKEV---SKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGV 302
+ K + + +M G+ D +Y+LLI+ K R + A + EM+ G+
Sbjct: 284 IDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEMVSHGI 343
Query: 303 RPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEK 362
Y+ + + G++++A+ +F M P +Y +++ Y ++ +
Sbjct: 344 NIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYE 403
Query: 363 FFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYG 422
+K+ V + TYGT++KG +L+ I +M +G +PN I+TT++ +
Sbjct: 404 LLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFL 463
Query: 423 KNKDFDSAVVWYKEMESCGFPPDQKAKNIL---LSLAKTADE-RNEANELLGNFNHPN 476
+N F A+ KEM+ G PD N L LS AK DE R+ E++ N PN
Sbjct: 464 QNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPN 521
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 59/246 (23%), Positives = 98/246 (39%), Gaps = 34/246 (13%)
Query: 218 GGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSKIYDQMQRAGLQPDVVSYALL 277
G +EKA + M ER + V ++S++ + G D V + +L
Sbjct: 111 GSFEKALSVVERMIERNWPVAEV-WSSIVRCSQEF------------VGKSDDGVLFGIL 157
Query: 278 INAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRC 337
+ Y EEA+ VF + + P +LLDA +D V+K M
Sbjct: 158 FDGYIAKGYIEEAVFVFSSSMGLELVPRLSRCKVLLDALLRWNRLDLFWDVYKGMVERNV 217
Query: 338 SPDICSYTTMLSAYVNASDME-------GAEKFFR----------RLKQD----GFVPNV 376
D+ +Y ++ A+ A +++ EK FR +LK+ G VP
Sbjct: 218 VFDVKTYHMLIIAHCRAGNVQLGKDVLFKTEKEFRTATLNVDGALKLKESMICKGLVPLK 277
Query: 377 ITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKE 436
TY LI G K+ LE + +M G+ + ++ ++D K ++ D+A E
Sbjct: 278 YTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHE 337
Query: 437 MESCGF 442
M S G
Sbjct: 338 MVSHGI 343
>gi|6630464|gb|AAF19552.1|AC007190_20 F23N19.4 [Arabidopsis thaliana]
Length = 1244
Score = 166 bits (420), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 115/478 (24%), Positives = 220/478 (46%), Gaps = 46/478 (9%)
Query: 44 AVAVLRSERTRGQPLPKDLVLGTLVR-LKQLKKWNVVSEVLEWLRIQSWWDFNEMDFLML 102
AVA L E + +P P + L+ + ++ K++VV + E ++ N + +L
Sbjct: 679 AVA-LFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQ-NLGIPHNHYTYSIL 736
Query: 103 ITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGP 162
I + ++ A VL M K GY P++V+ ++L+ Y R A A+ +M +G
Sbjct: 737 INCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGY 796
Query: 163 RPSALTYQIILKLFVEANKFKEAEEVFMTLLDE--------------------------- 195
+P+ +T+ ++ NK EA M L+D
Sbjct: 797 QPNTVTFNTLIHGLFLHNKASEA----MALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTD 852
Query: 196 ---------EKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLM 246
E+ L+P +++ +I K + A LF M +G++ + VTY+SL+
Sbjct: 853 LAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLI 912
Query: 247 SFETNY---KEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVR 303
S NY + S++ M + PDV +++ LI+A+ K + EA +++EM+ +
Sbjct: 913 SCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSID 972
Query: 304 PTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKF 363
P+ Y+ L++ F + +D+A+ +F+ M C PD+ +Y T++ + +E +
Sbjct: 973 PSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEV 1032
Query: 364 FRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGK 423
FR + Q G V N +TY LI+G + + + EI+ +M +G+ PN + T++D K
Sbjct: 1033 FREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCK 1092
Query: 424 NKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGI 481
N + A+V ++ ++ P NI++ A + + +L N + +P +
Sbjct: 1093 NGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDV 1150
Score = 155 bits (391), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 94/372 (25%), Positives = 177/372 (47%), Gaps = 6/372 (1%)
Query: 101 MLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSS 160
+++ K+GD + A +L+ M + P V+ + +++ + +A +F+ M++
Sbjct: 840 VVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETK 899
Query: 161 GPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGY 220
G RP+ +TY ++ ++ +A + +++ + + PD F +I + K G
Sbjct: 900 GIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERK---INPDVFTFSALIDAFVKEGKL 956
Query: 221 EKARKLFALMAERGVQQSTVTYNSLM---SFETNYKEVSKIYDQMQRAGLQPDVVSYALL 277
+A KL+ M +R + S VTY+SL+ E ++++ M PDVV+Y L
Sbjct: 957 VEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTL 1016
Query: 278 INAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRC 337
I + K +R EE + VF EM G+ YNIL+ +G D A+ +FK M D
Sbjct: 1017 IKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGV 1076
Query: 338 SPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMME 397
P+I +Y T+L +E A F L++ P + TY +I+G K +E +
Sbjct: 1077 PPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWD 1136
Query: 398 IYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAK 457
++ + + G+KP+ + T++ + + + A +KEM+ G P+ N L+
Sbjct: 1137 LFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARL 1196
Query: 458 TADERNEANELL 469
+R + EL+
Sbjct: 1197 RDGDREASAELI 1208
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 92/347 (26%), Positives = 169/347 (48%), Gaps = 6/347 (1%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
+I K + A + M KG P+VV++++L+ GR+ +A + M
Sbjct: 876 IIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERK 935
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
P T+ ++ FV+ K EAE+++ ++ K + P + +I + +
Sbjct: 936 INPDVFTFSALIDAFVKEGKLVEAEKLYDEMV---KRSIDPSIVTYSSLINGFCMHDRLD 992
Query: 222 KARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSK---IYDQMQRAGLQPDVVSYALLI 278
+A+++F M + VTYN+L+ YK V + ++ +M + GL + V+Y +LI
Sbjct: 993 EAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILI 1052
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCS 338
+A + A +F+EM+ GV P YN LLD +G +++A VF+ ++R +
Sbjct: 1053 QGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKME 1112
Query: 339 PDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEI 398
P I +Y M+ A +E F L G P+V+ Y T+I G+ + + E+ +
Sbjct: 1113 PTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADAL 1172
Query: 399 YDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPD 445
+ +M+ +G PN + T++ A ++ D +++ KEM SCGF D
Sbjct: 1173 FKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGD 1219
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 94/373 (25%), Positives = 176/373 (47%), Gaps = 33/373 (8%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
L+ + ++ + A ++ M + GY P +V++ A++++ + R +A F+ ++ G
Sbjct: 264 LVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKG 323
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
RP+ +TY ++ ++++ +A + L D K + P+ + ++ + K G
Sbjct: 324 IRPNVVTYTALVNGLCNSSRWSDAARL---LSDMIKKKITPNVITYSALLDAFVKNGKVL 380
Query: 222 KARKLFALMAERGVQQSTVTYNSL---MSFETNYKEVSKIYDQMQRAGLQPDVVSYALLI 278
+A++LF M + VTY+SL + E ++++D M G DVVSY LI
Sbjct: 381 EAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLI 440
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCS 338
N + KA+R E+ + +F EM G+ YN L+ F +G VD+A+ F M S
Sbjct: 441 NGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGIS 500
Query: 339 PDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEI 398
PDI +Y +L + ++E A F +++ +++TY T+I+G K +E+ +
Sbjct: 501 PDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSL 560
Query: 399 YDKMRVNGIKPNQTIFTTIMDA-------------YGKNK--------------DFDSAV 431
+ + + G+KP+ +TT+M Y K K D +
Sbjct: 561 FCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGLMKNDCTLSDGDITLSA 620
Query: 432 VWYKEMESCGFPP 444
K+M SCG+ P
Sbjct: 621 ELIKKMLSCGYAP 633
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 88/345 (25%), Positives = 166/345 (48%), Gaps = 6/345 (1%)
Query: 112 FNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQI 171
N A + S M K PS+V L+ A + +Y ++ ++M+ G R T+ I
Sbjct: 169 LNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNI 228
Query: 172 ILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMA 231
++ F + A + +L K +PD+ ++ + + A L M
Sbjct: 229 VINCFCCCFQVSLALSILGKML---KLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMV 285
Query: 232 ERGVQQSTVTYNSLMSFETNYKEVSKIYD---QMQRAGLQPDVVSYALLINAYGKARREE 288
E G + V YN+++ K V+ +D +++R G++P+VV+Y L+N + R
Sbjct: 286 EIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWS 345
Query: 289 EALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTML 348
+A + +M+ + P Y+ LLDAF +G V +A+ +F+ M R PDI +Y++++
Sbjct: 346 DAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLI 405
Query: 349 SAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIK 408
+ ++ A + F + G + +V++Y TLI G+ K +E M+++ +M G+
Sbjct: 406 NGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLV 465
Query: 409 PNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILL 453
N + T++ + + D D A ++ +M+ G PD NILL
Sbjct: 466 SNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILL 510
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 84/315 (26%), Positives = 166/315 (52%), Gaps = 6/315 (1%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + + LI+ G ++ A ++LS M ++ P V + +AL++A+ + G+ AE ++
Sbjct: 904 NVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLY 963
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
M PS +TY ++ F ++ EA+++F ++ + PD ++ +I +
Sbjct: 964 DEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKH---CFPDVVTYNTLIKGF 1020
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSLMS--FETNYKEVSK-IYDQMQRAGLQPDV 271
K E+ ++F M++RG+ +TVTYN L+ F+ ++++ I+ +M G+ P++
Sbjct: 1021 CKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNI 1080
Query: 272 VSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKC 331
++Y L++ K + E+A+ VFE + + + PT YNI+++ +G V+ +F
Sbjct: 1081 MTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCN 1140
Query: 332 MRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNN 391
+ PD+ +Y TM+S + E A+ F+ +K+DG +PN Y TLI+ + +
Sbjct: 1141 LSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGD 1200
Query: 392 LEKMMEIYDKMRVNG 406
E E+ +MR G
Sbjct: 1201 REASAELIKEMRSCG 1215
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 95/415 (22%), Positives = 199/415 (47%), Gaps = 16/415 (3%)
Query: 48 LRSERTRGQPLPKDLVLGTLVR-LKQLKKWNVVSEV---LEWLRIQS-WWDFNEMDFLML 102
L S+ + +P P + L+ + +LKK++VV + +E L I++ + FN ++
Sbjct: 175 LFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFN-----IV 229
Query: 103 ITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGP 162
I + + A +L M K GY P V+ +L+ + R R +A ++ +M G
Sbjct: 230 INCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGY 289
Query: 163 RPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEK 222
+P + Y I+ + + +A + F + E+ ++P+ + ++ + +
Sbjct: 290 KPDIVAYNAIIDSLCKTKRVNDAFDFFKEI---ERKGIRPNVVTYTALVNGLCNSSRWSD 346
Query: 223 ARKLFALMAERGVQQSTVTYNSLM-SFETNYK--EVSKIYDQMQRAGLQPDVVSYALLIN 279
A +L + M ++ + + +TY++L+ +F N K E +++++M R + PD+V+Y+ LIN
Sbjct: 347 AARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLIN 406
Query: 280 AYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSP 339
R +EA +F+ M+ G +YN L++ F + V+ +F+ M +
Sbjct: 407 GLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVS 466
Query: 340 DICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIY 399
+ +Y T++ + A D++ A++FF ++ G P++ TY L+ G LEK + I+
Sbjct: 467 NTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIF 526
Query: 400 DKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLS 454
+ M+ + + +TT++ K + A + + G PD ++S
Sbjct: 527 EDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMS 581
Score = 121 bits (304), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 79/309 (25%), Positives = 156/309 (50%), Gaps = 7/309 (2%)
Query: 75 KWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSH 134
+W+ S +L + I+ + + F LI A+ K+G +AEK+ M K+ PS+V++
Sbjct: 920 RWSDASRLLSDM-IERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTY 978
Query: 135 TALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLD 194
++L+ + R A+ +F M S P +TY ++K F + + +E EVF +
Sbjct: 979 SSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREM-- 1036
Query: 195 EEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKE 254
+ L + ++++I +AG + A+++F M GV + +TYN+L+ +
Sbjct: 1037 -SQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGK 1095
Query: 255 VSK---IYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNI 311
+ K +++ +QR+ ++P + +Y ++I KA + E+ +F + GV+P AYN
Sbjct: 1096 LEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNT 1155
Query: 312 LLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDG 371
++ F G ++A +FK M+ D P+ Y T++ A + D E + + + ++ G
Sbjct: 1156 MISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCG 1215
Query: 372 FVPNVITYG 380
F + T G
Sbjct: 1216 FAGDASTIG 1224
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 76/343 (22%), Positives = 156/343 (45%), Gaps = 8/343 (2%)
Query: 143 RGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDE-EKSPLK 201
R + +A +F M S P PS + + +L V+ K+ +V ++L + E ++
Sbjct: 165 RDIKLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKY----DVVISLGKKMEVLGIR 220
Query: 202 PDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVS---KI 258
D F+++I + A + M + G + VT SL++ VS +
Sbjct: 221 NDLYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSL 280
Query: 259 YDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAI 318
D+M G +PD+V+Y +I++ K +R +A F+E+ G+RP Y L++
Sbjct: 281 VDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCN 340
Query: 319 SGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVIT 378
S A + M + + +P++ +Y+ +L A+V + A++ F + + P+++T
Sbjct: 341 SSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVT 400
Query: 379 YGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEME 438
Y +LI G + +++ +++D M G + + T+++ + K K + + ++EM
Sbjct: 401 YSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMS 460
Query: 439 SCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGI 481
G + N L+ A + ++A E + P I
Sbjct: 461 QRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDI 503
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 95/452 (21%), Positives = 191/452 (42%), Gaps = 33/452 (7%)
Query: 61 DLVLGTLVRLKQLKKWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLS 120
+++LG L +L+K V+ E ++ + D + + + +I K G +A +
Sbjct: 507 NILLGGLCDNGELEKALVIFEDMQ----KREMDLDIVTYTTVIRGMCKTGKVEEAWSLFC 562
Query: 121 FMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPS---------ALTYQI 171
++ KG P +V++T +M G EA++ +M+ G + L+ ++
Sbjct: 563 SLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGLMKNDCTLSDGDITLSAEL 622
Query: 172 ILKLF-----------VEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGY 220
I K+ +++ K+A + K+ +K+ + K
Sbjct: 623 IKKMLSCGYAPSLLKDIKSGVCKKALSLLRAF--SGKTSYDYREKLSRNGLSELK----L 676
Query: 221 EKARKLFALMAERGVQQSTVTYNSLMSF---ETNYKEVSKIYDQMQRAGLQPDVVSYALL 277
+ A LF M + S + ++ L+S + V + +QMQ G+ + +Y++L
Sbjct: 677 DDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSIL 736
Query: 278 INAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRC 337
IN + + + ALAV +M+ G P + LL+ + S + +A + M
Sbjct: 737 INCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGY 796
Query: 338 SPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMME 397
P+ ++ T++ + A R+ G P+++TYG ++ G K + +
Sbjct: 797 QPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFN 856
Query: 398 IYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAK 457
+ +KM ++P I+ TI+D K K D A+ +KEME+ G P+ + L+S
Sbjct: 857 LLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLC 916
Query: 458 TADERNEANELLGNFNHPNNEPGINGLSISVD 489
++A+ LL + P + S +D
Sbjct: 917 NYGRWSDASRLLSDMIERKINPDVFTFSALID 948
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 92/444 (20%), Positives = 180/444 (40%), Gaps = 60/444 (13%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
LI ++A ++ M KG VVS+ L+ + + R ++ +FR M G
Sbjct: 404 LINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRG 463
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
+ +TY +++ F +A +A+E F + + + PD +++++ G E
Sbjct: 464 LVSNTVTYNTLIQGFFQAGDVDKAQEFFSQM---DFFGISPDIWTYNILLGGLCDNGELE 520
Query: 222 KARKLFALMAERGVQQSTVTYNSL---MSFETNYKEVSKIYDQMQRAGLQPDVVSYALLI 278
KA +F M +R + VTY ++ M +E ++ + GL+PD+V+Y ++
Sbjct: 521 KALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMM 580
Query: 279 NA-------------YGKARRE--------------EEALAVFEEMLDAGVRPT------ 305
+ Y K ++E + + ++ML G P+
Sbjct: 581 SGLCTKGLLHEVEALYTKMKQEGLMKNDCTLSDGDITLSAELIKKMLSCGYAPSLLKDIK 640
Query: 306 ----HKAYNILLDAFA---------------ISGM-VDQARTVFKCMRRDRCSPDICSYT 345
KA + LL AF+ +S + +D A +F M + R P I ++
Sbjct: 641 SGVCKKALS-LLRAFSGKTSYDYREKLSRNGLSELKLDDAVALFGEMVKSRPFPSIIEFS 699
Query: 346 TMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVN 405
+LSA + + +++ G N TY LI + + + L + + KM
Sbjct: 700 KLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILINCFCRRSQLPLALAVLGKMMKL 759
Query: 406 GIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEA 465
G +PN +++++ Y +K AV +M G+ P+ N L+ ++ +EA
Sbjct: 760 GYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEA 819
Query: 466 NELLGNFNHPNNEPGINGLSISVD 489
L+ +P + + V+
Sbjct: 820 MALIDRMVAKGCQPDLVTYGVVVN 843
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 56/241 (23%), Positives = 111/241 (46%), Gaps = 10/241 (4%)
Query: 56 QPLPKDLVLGTLVRLKQLKKWNVVSEVLEWLRIQSWWDF--NEMDFLMLITAYGKQGDFN 113
P + TL+ K K+ V E +E R S N + + +LI + GD +
Sbjct: 1005 HCFPDVVTYNTLI--KGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCD 1062
Query: 114 KAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIIL 173
A+++ M G P+++++ L++ + G+ + A +F +Q S P+ TY I++
Sbjct: 1063 MAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMI 1122
Query: 174 KLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAER 233
+ +A K ++ ++F L +KPD ++ MI + + G E+A LF M E
Sbjct: 1123 EGMCKAGKVEDGWDLFCNL---SLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKED 1179
Query: 234 GVQQSTVTYNSLMSF---ETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEA 290
G ++ YN+L+ + + + +++ +M+ G D + L+ N R ++
Sbjct: 1180 GTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLVTNMLHDGRLDKSF 1239
Query: 291 L 291
L
Sbjct: 1240 L 1240
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/201 (21%), Positives = 91/201 (45%)
Query: 289 EALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTML 348
+A+ +F +M+ + P+ +N LL A D ++ K M D+ ++ ++
Sbjct: 171 DAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVI 230
Query: 349 SAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIK 408
+ + + A ++ + G+ P+ +T G+L+ G+ + N + + + DKM G K
Sbjct: 231 NCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYK 290
Query: 409 PNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANEL 468
P+ + I+D+ K K + A ++KE+E G P+ L++ + ++A L
Sbjct: 291 PDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARL 350
Query: 469 LGNFNHPNNEPGINGLSISVD 489
L + P + S +D
Sbjct: 351 LSDMIKKKITPNVITYSALLD 371
>gi|297826581|ref|XP_002881173.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297327012|gb|EFH57432.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 917
Score = 166 bits (419), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 99/357 (27%), Positives = 187/357 (52%), Gaps = 9/357 (2%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
+I+ G+ G A+++ GY +V + +AL+ AYGR G ++ A ++F M+ G
Sbjct: 239 MISTLGRYGKVTIAKRIFETAFSGGYGNTVYAFSALISAYGRSGLHEEAISVFNSMKEYG 298
Query: 162 PRPSALTYQIILKLFVEAN-KFKEAEEVFMTLLDE-EKSPLKPDQKMFHMMIYMYKKAGG 219
RP+ +TY ++ + +FK+ + F DE +++ ++PD+ F+ ++ + + G
Sbjct: 299 LRPNLVTYNAVIDACGKGGMEFKQVAKFF----DEMQRNCVQPDRITFNSLLAVCSRGGL 354
Query: 220 YEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVS---KIYDQMQRAGLQPDVVSYAL 276
+E AR LF M+ R ++Q +YN+L+ ++ +I QM + P+VVSY+
Sbjct: 355 WEAARNLFDEMSNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPAKRIMPNVVSYST 414
Query: 277 LINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDR 336
+I+ + KA R +EAL +F EM + +YN LL + G ++A + + M
Sbjct: 415 VIDGFAKAGRFDEALNLFGEMRYLNIALDRVSYNTLLSIYTKVGRSEEALDILREMASVG 474
Query: 337 CSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMM 396
D+ +Y +L Y + +K F +K++ +PN++TY TLI GY+K ++ M
Sbjct: 475 IKKDVVTYNALLGGYGKQGKYDEVKKVFAEMKREHVLPNLLTYSTLIDGYSKGGLYKEAM 534
Query: 397 EIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILL 453
E++ + + G++ + +++ ++DA KN SAV EM G P+ N ++
Sbjct: 535 EVFREFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEGISPNVVTYNSII 591
Score = 108 bits (270), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 85/341 (24%), Positives = 169/341 (49%), Gaps = 24/341 (7%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
L+ A K G + A ++L+ M K P+VVS++ +++ + + GR+ A +F M+
Sbjct: 380 LLDAICKGGQMDLAFEILAQMPAKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLN 439
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
++Y +L ++ + + +EA ++ L + +K D ++ ++ Y K G Y+
Sbjct: 440 IALDRVSYNTLLSIYTKVGRSEEALDI---LREMASVGIKKDVVTYNALLGGYGKQGKYD 496
Query: 222 KARKLFALMAERGVQQSTVTYNSLMSFETN---YKEVSKIYDQMQRAGLQPDVVSYALLI 278
+ +K+FA M V + +TY++L+ + YKE +++ + + AGL+ DVV Y+ LI
Sbjct: 497 EVKKVFAEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEVFREFKSAGLRADVVLYSALI 556
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCS 338
+A K A+++ +EM G+ P YN ++DAF S ++++ D +
Sbjct: 557 DALCKNGLVGSAVSLIDEMTKEGISPNVVTYNSIIDAFGRSATMERS--------ADYSN 608
Query: 339 PDICSYTTMLSAYVNASDMEGAE--KFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMM 396
+++ SA ++ EG + F +L +G N +T + L ++
Sbjct: 609 GGSLPFSS--SALSELTETEGNRVIQLFGQLTSEG--NNRMTKDC----KEGMQELSCIL 660
Query: 397 EIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEM 437
E++ KM IKPN F+ I++A + F+ A + +E+
Sbjct: 661 EVFRKMHQLEIKPNVVTFSAILNACSRCNSFEDASMLLEEL 701
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 68/253 (26%), Positives = 124/253 (49%), Gaps = 4/253 (1%)
Query: 205 KMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETN---YKEVSKIYDQ 261
K+ MI + G A+++F G + +++L+S ++E +++
Sbjct: 234 KLASAMISTLGRYGKVTIAKRIFETAFSGGYGNTVYAFSALISAYGRSGLHEEAISVFNS 293
Query: 262 MQRAGLQPDVVSYALLINAYGKARREEEALA-VFEEMLDAGVRPTHKAYNILLDAFAISG 320
M+ GL+P++V+Y +I+A GK E + +A F+EM V+P +N LL + G
Sbjct: 294 MKEYGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQRNCVQPDRITFNSLLAVCSRGG 353
Query: 321 MVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYG 380
+ + AR +F M R D+ SY T+L A M+ A + ++ +PNV++Y
Sbjct: 354 LWEAARNLFDEMSNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPAKRIMPNVVSYS 413
Query: 381 TLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESC 440
T+I G+AK ++ + ++ +MR I ++ + T++ Y K + A+ +EM S
Sbjct: 414 TVIDGFAKAGRFDEALNLFGEMRYLNIALDRVSYNTLLSIYTKVGRSEEALDILREMASV 473
Query: 441 GFPPDQKAKNILL 453
G D N LL
Sbjct: 474 GIKKDVVTYNALL 486
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 76/163 (46%), Gaps = 13/163 (7%)
Query: 94 FNEMDFL----------MLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGR 143
F EM +L L++ Y K G +A +L M G VV++ AL+ YG+
Sbjct: 432 FGEMRYLNIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGK 491
Query: 144 GGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPD 203
G+Y + +F M+ P+ LTY ++ + + +KEA EVF + + L+ D
Sbjct: 492 QGKYDEVKKVFAEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEVFREF---KSAGLRAD 548
Query: 204 QKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLM 246
++ +I K G A L M + G+ + VTYNS++
Sbjct: 549 VVLYSALIDALCKNGLVGSAVSLIDEMTKEGISPNVVTYNSII 591
>gi|14532710|gb|AAK64156.1| unknown protein [Arabidopsis thaliana]
Length = 974
Score = 166 bits (419), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 97/349 (27%), Positives = 172/349 (49%), Gaps = 8/349 (2%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
LI Y ++ + + ++L M K+ S ++ +++ G A I + M +SG
Sbjct: 388 LIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASG 447
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSP-LKPDQKMFHMMIYMYKKAGGY 220
RP+ + Y ++K F++ ++F +A M +L E K + PD ++ +I KA
Sbjct: 448 CRPNVVIYTTLIKTFLQNSRFGDA----MRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRM 503
Query: 221 EKARKLFALMAERGVQQSTVTYNSLMSF---ETNYKEVSKIYDQMQRAGLQPDVVSYALL 277
++AR M E G++ + TY + +S + + K +M+ G+ P+ V L
Sbjct: 504 DEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGL 563
Query: 278 INAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRC 337
IN Y K + EA + + M+D G+ K Y +L++ + VD A +F+ MR
Sbjct: 564 INEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGI 623
Query: 338 SPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMME 397
+PD+ SY +++ + +M+ A F + ++G PNVI Y L+ G+ + +EK E
Sbjct: 624 APDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKE 683
Query: 398 IYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQ 446
+ D+M V G+ PN + TI+D Y K+ D A + EM+ G PD
Sbjct: 684 LLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDS 732
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 93/384 (24%), Positives = 170/384 (44%), Gaps = 44/384 (11%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + I+ Y + +F A+K + M + G P+ V T L+ Y + G+ A + +
Sbjct: 521 NAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAY 580
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
R M G A TY +++ + +K +AEE+F + + PD + ++I +
Sbjct: 581 RSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREM---RGKGIAPDVFSYGVLINGF 637
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSK---IYDQMQRAGLQPDV 271
K G +KA +F M E G+ + + YN L+ E+ K + D+M GL P+
Sbjct: 638 SKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNA 697
Query: 272 VSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKC 331
V+Y +I+ Y K+ EA +F+EM G+ P Y L+D V++A T+F
Sbjct: 698 VTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGT 757
Query: 332 MRRDRCS--------------------------------------PDICSYTTMLSAYVN 353
++ S P+ +Y M+
Sbjct: 758 NKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCK 817
Query: 354 ASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTI 413
++E A++ F +++ +P VITY +L+ GY K+ +M ++D+ GI+P+ +
Sbjct: 818 EGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIM 877
Query: 414 FTTIMDAYGKNKDFDSAVVWYKEM 437
++ I++A+ K A+V +M
Sbjct: 878 YSVIINAFLKEGMTTKALVLVDQM 901
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 92/367 (25%), Positives = 165/367 (44%), Gaps = 14/367 (3%)
Query: 29 KNWRRLMNQI---EEVGSAVAVLRSERTRGQPLPKDLVLGTLVR-LKQLKKWNVVSEVLE 84
K + LMN + ++V A + R R +G P G L+ +L S + +
Sbjct: 593 KTYTVLMNGLFKNDKVDDAEEIFREMRGKGIA-PDVFSYGVLINGFSKLGNMQKASSIFD 651
Query: 85 WLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRG 144
+ ++ N + + ML+ + + G+ KA+++L M+ KG P+ V++ +++ Y +
Sbjct: 652 EM-VEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKS 710
Query: 145 GRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQ 204
G A +F M+ G P + Y ++ N + A +F T S P
Sbjct: 711 GDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTNKKGCASSTAPFN 770
Query: 205 KMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSF---ETNYKEVSKIYDQ 261
+ + + K E +L +R + + VTYN ++ + E N + +++ Q
Sbjct: 771 ALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQ 830
Query: 262 MQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGM 321
MQ A L P V++Y L+N Y K R E VF+E + AG+ P H Y+++++AF GM
Sbjct: 831 MQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGM 890
Query: 322 VDQARTVFKCMRR-----DRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNV 376
+A + M D C I + +LS + +ME AEK + + ++P+
Sbjct: 891 TTKALVLVDQMFAKNAVDDGCKLSISTCRALLSGFAKVGEMEVAEKVMENMVRLQYIPDS 950
Query: 377 ITYGTLI 383
T LI
Sbjct: 951 ATVIELI 957
Score = 115 bits (287), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 90/392 (22%), Positives = 169/392 (43%), Gaps = 33/392 (8%)
Query: 69 RLKQLKKWNVVSEVLEWLRIQSWWD-----------FNEMDFLMLITAYGKQGDFNKAEK 117
RL + K ++ +L W R+ +WD F+ + MLI A+ + G+ +
Sbjct: 185 RLSRCKV--LLDALLRWNRLDLFWDVYKGMVERNVVFDVKTYHMLIIAHCRAGNVQLGKD 242
Query: 118 VLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFV 177
VL F +K + TA + G A + M G P TY +++
Sbjct: 243 VL-FKTEKEF------RTATLNVDG-------ALKLKESMICKGLVPLKYTYDVLIDGLC 288
Query: 178 EANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQ 237
+ + ++A+ + L++ + + D + ++I K + A+ L M G+
Sbjct: 289 KIKRLEDAKSL---LVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEMVSHGINI 345
Query: 238 STVTYNS---LMSFETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVF 294
Y+ +MS E ++ ++D M +GL P +YA LI Y + + + +
Sbjct: 346 KPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELL 405
Query: 295 EEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNA 354
EM + + Y ++ SG +D A + K M C P++ YTT++ ++
Sbjct: 406 VEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQN 465
Query: 355 SDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIF 414
S A + + +K+ G P++ Y +LI G +K +++ +M NG+KPN +
Sbjct: 466 SRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTY 525
Query: 415 TTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQ 446
+ Y + +F SA + KEM CG P++
Sbjct: 526 GAFISGYIEASEFASADKYVKEMRECGVLPNK 557
Score = 95.1 bits (235), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 87/358 (24%), Positives = 155/358 (43%), Gaps = 37/358 (10%)
Query: 151 EAIFRRMQSSG----PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKM 206
EA+F S G PR S +++L + N+ +V+ +++ + D K
Sbjct: 169 EAVFVFSSSMGLELVPRLSRC--KVLLDALLRWNRLDLFWDVYKGMVERN---VVFDVKT 223
Query: 207 FHMMIYMYKKAGGYE---------------------KARKLFALMAERGVQQSTVTYNSL 245
+HM+I + +AG + A KL M +G+ TY+ L
Sbjct: 224 YHMLIIAHCRAGNVQLGKDVLFKTEKEFRTATLNVDGALKLKESMICKGLVPLKYTYDVL 283
Query: 246 MSFETNYKEV---SKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGV 302
+ K + + +M G+ D +Y+LLI+ K R + A + EM+ G+
Sbjct: 284 IDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEMVSHGI 343
Query: 303 RPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEK 362
Y+ + + G++++A+ +F M P +Y +++ Y ++ +
Sbjct: 344 NIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYE 403
Query: 363 FFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYG 422
+K+ V + TYGT++KG +L+ I +M +G +PN I+TT++ +
Sbjct: 404 LLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFL 463
Query: 423 KNKDFDSAVVWYKEMESCGFPPDQKAKNIL---LSLAKTADE-RNEANELLGNFNHPN 476
+N F A+ KEM+ G PD N L LS AK DE R+ E++ N PN
Sbjct: 464 QNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPN 521
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 59/246 (23%), Positives = 98/246 (39%), Gaps = 34/246 (13%)
Query: 218 GGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSKIYDQMQRAGLQPDVVSYALL 277
G +EKA + M ER + V ++S++ + G D V + +L
Sbjct: 111 GSFEKALSVVERMIERNWPVAEV-WSSIVRCSQEF------------VGKSDDGVLFGIL 157
Query: 278 INAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRC 337
+ Y EEA+ VF + + P +LLDA +D V+K M
Sbjct: 158 FDGYIAKEYIEEAVFVFSSSMGLELVPRLSRCKVLLDALLRWNRLDLFWDVYKGMVERNV 217
Query: 338 SPDICSYTTMLSAYVNASDME-------GAEKFFR----------RLKQD----GFVPNV 376
D+ +Y ++ A+ A +++ EK FR +LK+ G VP
Sbjct: 218 VFDVKTYHMLIIAHCRAGNVQLGKDVLFKTEKEFRTATLNVDGALKLKESMICKGLVPLK 277
Query: 377 ITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKE 436
TY LI G K+ LE + +M G+ + ++ ++D K ++ D+A E
Sbjct: 278 YTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHE 337
Query: 437 MESCGF 442
M S G
Sbjct: 338 MVSHGI 343
>gi|302784458|ref|XP_002974001.1| hypothetical protein SELMODRAFT_100394 [Selaginella moellendorffii]
gi|300158333|gb|EFJ24956.1| hypothetical protein SELMODRAFT_100394 [Selaginella moellendorffii]
Length = 561
Score = 166 bits (419), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 108/408 (26%), Positives = 197/408 (48%), Gaps = 20/408 (4%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
NE + LI K G ++A ++L M +G P V H +++ + GR+ +A F
Sbjct: 29 NEFTYGSLIHGLCKAGKLDQAYELLDEMRDRGIPPGVAVHNGVIKGLCKAGRFGDALGYF 88
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
+ + + P +T+ I++ V++ + +EA ++F ++ S P+ + +I
Sbjct: 89 KTVAGTKCTPDIITFNILVDALVKSGRVEEAFQIFESM--HTSSQCLPNVVTYTTVINGL 146
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSK---IYDQMQRAGLQPDV 271
K G ++A +L LM E G + +TY+ L+ K + +M R G QPDV
Sbjct: 147 CKDGKLDRAIELLDLMNETGCCPNVITYSVLVEGLCKAGRTDKGFTLLQEMTRRGFQPDV 206
Query: 272 VSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKC 331
+ Y L+N K+RR +EAL + + M+ +G PT YN L++ F S VD+A + +
Sbjct: 207 IMYNTLLNGLCKSRRLDEALELVQLMIRSGCYPTVVTYNSLMELFCRSKQVDRAFRLIQV 266
Query: 332 MRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAK--- 388
M C PD+ +Y T+++ + ++ A+ +++ VP+VITY T+I G K
Sbjct: 267 MSERGCPPDVINYNTVIAGLCRDARLDDAQALLKQMVAARCVPDVITYSTIIDGLCKDWR 326
Query: 389 VN---NLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPD 445
V+ LE EI + M+ G PN + +++ + + A+ + M PD
Sbjct: 327 VDADWKLEAACEILEMMKQTGCPPNAGTYAVVIEGLCRARKSQQALALLRRMIDSEVVPD 386
Query: 446 QKAKNILL-SLAKTADERNEANELLGNFNHPNNEPG-------INGLS 485
+ ++++ SL K+ D + A ++ G + +P I+GLS
Sbjct: 387 LSSFSMVIGSLCKSHD-LDAAYKIFGMMSERECKPNPVAYAALIDGLS 433
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 85/437 (19%), Positives = 194/437 (44%), Gaps = 52/437 (11%)
Query: 81 EVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEA 140
++ E + S N + + +I K G ++A ++L MN+ G P+V++++ L+E
Sbjct: 121 QIFESMHTSSQCLPNVVTYTTVINGLCKDGKLDRAIELLDLMNETGCCPNVITYSVLVEG 180
Query: 141 YGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPL 200
+ GR + + M G +P + Y +L ++ + EA E+ ++ +S
Sbjct: 181 LCKAGRTDKGFTLLQEMTRRGFQPDVIMYNTLLNGLCKSRRLDEALELVQLMI---RSGC 237
Query: 201 KPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMS------------- 247
P ++ ++ ++ ++ ++A +L +M+ERG + YN++++
Sbjct: 238 YPTVVTYNSLMELFCRSKQVDRAFRLIQVMSERGCPPDVINYNTVIAGLCRDARLDDAQA 297
Query: 248 -----------------------------FETNYK--EVSKIYDQMQRAGLQPDVVSYAL 276
+ ++K +I + M++ G P+ +YA+
Sbjct: 298 LLKQMVAARCVPDVITYSTIIDGLCKDWRVDADWKLEAACEILEMMKQTGCPPNAGTYAV 357
Query: 277 LINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDR 336
+I +AR+ ++ALA+ M+D+ V P ++++++ + S +D A +F M
Sbjct: 358 VIEGLCRARKSQQALALLRRMIDSEVVPDLSSFSMVIGSLCKSHDLDAAYKIFGMMSERE 417
Query: 337 CSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMM 396
C P+ +Y ++ +++ A + F L + F P V TY +++ G V +E+ +
Sbjct: 418 CKPNPVAYAALIDGLSKGGEVDKAVRVF-ELMVESFRPGVATYNSVLDGLCGVGRIEEAV 476
Query: 397 EIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLS-L 455
+ + M P+ + ++ + + A ++ +E+ GF + N+L++ L
Sbjct: 477 RMVEGMIHKECFPDGASYGALIRGLCRVSCVEEAYELFQAVEAKGFAMEVGVYNVLVNEL 536
Query: 456 AK---TADERNEANELL 469
K +D AN+L+
Sbjct: 537 CKKKRLSDAHGVANKLI 553
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 75/332 (22%), Positives = 145/332 (43%), Gaps = 10/332 (3%)
Query: 173 LKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAE 232
L L V A + +A ++F EE+ P++ + +I+ KAG ++A +L M +
Sbjct: 5 LNLLVRAGQHGQAVQLF----REERC--VPNEFTYGSLIHGLCKAGKLDQAYELLDEMRD 58
Query: 233 RGVQQSTVTYNSL---MSFETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEE 289
RG+ +N + + + + + + PD++++ +L++A K+ R EE
Sbjct: 59 RGIPPGVAVHNGVIKGLCKAGRFGDALGYFKTVAGTKCTPDIITFNILVDALVKSGRVEE 118
Query: 290 ALAVFEEM-LDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTML 348
A +FE M + P Y +++ G +D+A + M C P++ +Y+ ++
Sbjct: 119 AFQIFESMHTSSQCLPNVVTYTTVINGLCKDGKLDRAIELLDLMNETGCCPNVITYSVLV 178
Query: 349 SAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIK 408
A + + + + GF P+VI Y TL+ G K L++ +E+ M +G
Sbjct: 179 EGLCKAGRTDKGFTLLQEMTRRGFQPDVIMYNTLLNGLCKSRRLDEALELVQLMIRSGCY 238
Query: 409 PNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANEL 468
P + ++M+ + ++K D A + M G PPD N +++ ++A L
Sbjct: 239 PTVVTYNSLMELFCRSKQVDRAFRLIQVMSERGCPPDVINYNTVIAGLCRDARLDDAQAL 298
Query: 469 LGNFNHPNNEPGINGLSISVDEEDDDDDDDED 500
L P + S +D D D D
Sbjct: 299 LKQMVAARCVPDVITYSTIIDGLCKDWRVDAD 330
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 86/371 (23%), Positives = 166/371 (44%), Gaps = 15/371 (4%)
Query: 48 LRSERTRGQPLPKDLVLGTLVRLKQLKKWNVVSEVLEW--LRIQSWWDFNEMDFLMLITA 105
L E TR P ++ TL L L K + E LE L I+S + + L+
Sbjct: 193 LLQEMTRRGFQPDVIMYNTL--LNGLCKSRRLDEALELVQLMIRSGCYPTVVTYNSLMEL 250
Query: 106 YGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPS 165
+ + ++A +++ M+++G P V+++ ++ R R +A+A+ ++M ++ P
Sbjct: 251 FCRSKQVDRAFRLIQVMSERGCPPDVINYNTVIAGLCRDARLDDAQALLKQMVAARCVPD 310
Query: 166 ALTYQIILKLF-----VEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGY 220
+TY I+ V+A+ EA + ++ + P P+ + ++I +A
Sbjct: 311 VITYSTIIDGLCKDWRVDADWKLEAACEILEMMKQTGCP--PNAGTYAVVIEGLCRARKS 368
Query: 221 EKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVS---KIYDQMQRAGLQPDVVSYALL 277
++A L M + V +++ ++ ++ KI+ M +P+ V+YA L
Sbjct: 369 QQALALLRRMIDSEVVPDLSSFSMVIGSLCKSHDLDAAYKIFGMMSERECKPNPVAYAAL 428
Query: 278 INAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRC 337
I+ K ++A+ VFE M+++ RP YN +LD G +++A + + M C
Sbjct: 429 IDGLSKGGEVDKAVRVFELMVES-FRPGVATYNSVLDGLCGVGRIEEAVRMVEGMIHKEC 487
Query: 338 SPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMME 397
PD SY ++ S +E A + F+ ++ GF V Y L+ K L
Sbjct: 488 FPDGASYGALIRGLCRVSCVEEAYELFQAVEAKGFAMEVGVYNVLVNELCKKKRLSDAHG 547
Query: 398 IYDKMRVNGIK 408
+ +K+ G K
Sbjct: 548 VANKLIEAGYK 558
Score = 46.2 bits (108), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 38/182 (20%), Positives = 72/182 (39%), Gaps = 6/182 (3%)
Query: 310 NILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQ 369
N L+ +G QA +F R +RC P+ +Y +++ A ++ A + ++
Sbjct: 2 NCALNLLVRAGQHGQAVQLF---REERCVPNEFTYGSLIHGLCKAGKLDQAYELLDEMRD 58
Query: 370 DGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDS 429
G P V + +IKG K + + + P+ F ++DA K+ +
Sbjct: 59 RGIPPGVAVHNGVIKGLCKAGRFGDALGYFKTVAGTKCTPDIITFNILVDALVKSGRVEE 118
Query: 430 AVVWYKEMESCG--FPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGINGLSIS 487
A ++ M + P ++ L K + + A ELL N P + S+
Sbjct: 119 AFQIFESMHTSSQCLPNVVTYTTVINGLCKDG-KLDRAIELLDLMNETGCCPNVITYSVL 177
Query: 488 VD 489
V+
Sbjct: 178 VE 179
>gi|255547572|ref|XP_002514843.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223545894|gb|EEF47397.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 594
Score = 166 bits (419), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 95/384 (24%), Positives = 189/384 (49%), Gaps = 6/384 (1%)
Query: 101 MLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSS 160
M++ K G + A + M + P VVS++ ++++ + A +F M+S
Sbjct: 214 MIVNGLCKIGKTSAAIVWMKKMVELDCEPEVVSYSIIIDSLCKNRLVNEAVDLFYHMRSI 273
Query: 161 GPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGY 220
G P+ +TY ++ + ++K+A +F +L+ +KPD F +++ K G
Sbjct: 274 GISPTVVTYNSLIYGMCNSGQWKQASILFKEMLEWN---MKPDVVTFSILVDALCKEGVV 330
Query: 221 EKARKLFALMAERGVQQSTVTYNSLM---SFETNYKEVSKIYDQMQRAGLQPDVVSYALL 277
+A +F M + ++ VTY+SL+ + +KE S + ++M ++PDVV++++
Sbjct: 331 LEALSVFGKMIQIAMEPDIVTYSSLIHGVCKSSLWKESSTLLNEMLSRNIRPDVVTFSIW 390
Query: 278 INAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRC 337
++ + K EA ++ M++ G+RP YN L+D + + +D+AR VF M C
Sbjct: 391 VDVFCKKGMVSEAQSIINLMIERGLRPNVVTYNSLMDGYCLHSQMDEARKVFDIMVNKGC 450
Query: 338 SPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMME 397
+PD+ SY ++ Y + ++ A++ F + G PN IT+ TLI G + E
Sbjct: 451 APDVLSYNILIKGYCKSERIDEAKQLFDEMSHKGLTPNSITHTTLISGLCQAGRPYAAKE 510
Query: 398 IYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAK 457
++ KM +G P+ ++T++ + K+ D A+ ++ ++ P+ ILL
Sbjct: 511 LFKKMGSHGCPPDLITYSTLLSGFCKHGHLDEALALFEALKKSQLKPNHVICKILLGGMC 570
Query: 458 TADERNEANELLGNFNHPNNEPGI 481
A + +A EL + + +P +
Sbjct: 571 KAGKLEDAKELFSSLSIEELQPDV 594
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 93/349 (26%), Positives = 161/349 (46%), Gaps = 35/349 (10%)
Query: 97 MDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRR 156
+ + ++I + K N+A + M G +P+VV++ +L+ G++K A +F+
Sbjct: 245 VSYSIIIDSLCKNRLVNEAVDLFYHMRSIGISPTVVTYNSLIYGMCNSGQWKQASILFKE 304
Query: 157 MQSSGPRPSALTYQIILKLFVEANKFKEAEEVF--------------------------- 189
M +P +T+ I++ + EA VF
Sbjct: 305 MLEWNMKPDVVTFSILVDALCKEGVVLEALSVFGKMIQIAMEPDIVTYSSLIHGVCKSSL 364
Query: 190 ----MTLLDEEKS-PLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNS 244
TLL+E S ++PD F + + ++ K G +A+ + LM ERG++ + VTYNS
Sbjct: 365 WKESSTLLNEMLSRNIRPDVVTFSIWVDVFCKKGMVSEAQSIINLMIERGLRPNVVTYNS 424
Query: 245 LM---SFETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAG 301
LM + E K++D M G PDV+SY +LI Y K+ R +EA +F+EM G
Sbjct: 425 LMDGYCLHSQMDEARKVFDIMVNKGCAPDVLSYNILIKGYCKSERIDEAKQLFDEMSHKG 484
Query: 302 VRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAE 361
+ P + L+ +G A+ +FK M C PD+ +Y+T+LS + ++ A
Sbjct: 485 LTPNSITHTTLISGLCQAGRPYAAKELFKKMGSHGCPPDLITYSTLLSGFCKHGHLDEAL 544
Query: 362 KFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPN 410
F LK+ PN + L+ G K LE E++ + + ++P+
Sbjct: 545 ALFEALKKSQLKPNHVICKILLGGMCKAGKLEDAKELFSSLSIEELQPD 593
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 69/368 (18%), Positives = 155/368 (42%), Gaps = 44/368 (11%)
Query: 108 KQGDFNKAEKVLSFMNKKGYA---PSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRP 164
K G F+ + L++ N+ + P + L+ A R Y + +I+R+M+ G
Sbjct: 78 KGGSFSNFDDALAYFNQMVHMNPFPCITQFNQLLAALVRMKHYDSVVSIYRKMEFFGVSC 137
Query: 165 SALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKAR 224
S T I++ + + +++ G+
Sbjct: 138 SVYTLTILI----------------------------------NCLCHLHLVGLGFSVLG 163
Query: 225 KLFALMAERGVQQSTVTYNSL---MSFETNYKEVSKIYDQMQRAGLQPDVVSYALLINAY 281
K+F L G + S +T+N+L + E E + D + G QP V ++ +++N
Sbjct: 164 KIFKL----GFKPSIITFNTLINGLCIEGRIVEAMEQLDYIMSRGYQPTVYTHTMIVNGL 219
Query: 282 GKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDI 341
K + A+ ++M++ P +Y+I++D+ + +V++A +F MR SP +
Sbjct: 220 CKIGKTSAAIVWMKKMVELDCEPEVVSYSIIIDSLCKNRLVNEAVDLFYHMRSIGISPTV 279
Query: 342 CSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDK 401
+Y +++ N+ + A F+ + + P+V+T+ L+ K + + + ++ K
Sbjct: 280 VTYNSLIYGMCNSGQWKQASILFKEMLEWNMKPDVVTFSILVDALCKEGVVLEALSVFGK 339
Query: 402 MRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADE 461
M ++P+ +++++ K+ + + EM S PD +I + +
Sbjct: 340 MIQIAMEPDIVTYSSLIHGVCKSSLWKESSTLLNEMLSRNIRPDVVTFSIWVDVFCKKGM 399
Query: 462 RNEANELL 469
+EA ++
Sbjct: 400 VSEAQSII 407
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/231 (19%), Positives = 93/231 (40%)
Query: 251 NYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYN 310
+Y V IY +M+ G+ V + +LIN +V ++ G +P+ +N
Sbjct: 119 HYDSVVSIYRKMEFFGVSCSVYTLTILINCLCHLHLVGLGFSVLGKIFKLGFKPSIITFN 178
Query: 311 ILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQD 370
L++ I G + +A + P + ++T +++ A + +++ +
Sbjct: 179 TLINGLCIEGRIVEAMEQLDYIMSRGYQPTVYTHTMIVNGLCKIGKTSAAIVWMKKMVEL 238
Query: 371 GFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSA 430
P V++Y +I K + + ++++ MR GI P + +++ + + A
Sbjct: 239 DCEPEVVSYSIIIDSLCKNRLVNEAVDLFYHMRSIGISPTVVTYNSLIYGMCNSGQWKQA 298
Query: 431 VVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGI 481
+ +KEM PD +IL+ EA + G EP I
Sbjct: 299 SILFKEMLEWNMKPDVVTFSILVDALCKEGVVLEALSVFGKMIQIAMEPDI 349
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 42/180 (23%), Positives = 82/180 (45%), Gaps = 6/180 (3%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + + L+ Y ++A KV M KG AP V+S+ L++ Y + R A+ +F
Sbjct: 418 NVVTYNSLMDGYCLHSQMDEARKVFDIMVNKGCAPDVLSYNILIKGYCKSERIDEAKQLF 477
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
M G P+++T+ ++ +A + A+E+F + P PD + ++ +
Sbjct: 478 DEMSHKGLTPNSITHTTLISGLCQAGRPYAAKELFKK-MGSHGCP--PDLITYSTLLSGF 534
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSL---MSFETNYKEVSKIYDQMQRAGLQPDV 271
K G ++A LF + + ++ + V L M ++ +++ + LQPDV
Sbjct: 535 CKHGHLDEALALFEALKKSQLKPNHVICKILLGGMCKAGKLEDAKELFSSLSIEELQPDV 594
>gi|168062855|ref|XP_001783392.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162665090|gb|EDQ51786.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 540
Score = 166 bits (419), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 97/378 (25%), Positives = 187/378 (49%), Gaps = 6/378 (1%)
Query: 99 FLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQ 158
+ +++A K G+ +K + L M + G P V+++ L++ +G+ GR+++A A FR +Q
Sbjct: 132 YCAVLSACRKVGNIDKGNETLKEMREAGIKPDQVAYSILIDMFGKAGRHEDAAATFRELQ 191
Query: 159 SSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAG 218
SG P ++ Y ++ F + +A VF + ++S D +F+ MI +Y KA
Sbjct: 192 MSGYLPDSVAYNTLIHAFAKVGMVDQATLVFK---EAQRSFCLDDPVIFYTMIQVYAKAR 248
Query: 219 GYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKE---VSKIYDQMQRAGLQPDVVSYA 275
++A + LM E G+Q + + Y S+++ + K++++MQ + + +Y
Sbjct: 249 MADQALHVLKLMKEIGLQPNELGYGSVLNAFMRANQPMGAIKLFEEMQESNCRFGESTYI 308
Query: 276 LLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRD 335
++N Y KA A + +M G R AY+ L+D + G + +A +F M++
Sbjct: 309 TMLNVYSKAGFHSAAEELLAKMRQLGFRRNVVAYSTLIDMYGKVGKLQEATRLFSTMKQQ 368
Query: 336 RCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKM 395
C ++ Y TML Y A + AE+ LK VP+ +TY TLI Y ++ E+
Sbjct: 369 GCKGNLIVYNTMLDMYGKAGRINDAERLMAELKDSKLVPDTVTYTTLINAYNRLGRFEEC 428
Query: 396 MEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSL 455
+ ++++ R +G+K ++ + +++ YGK + + + M G PD + ++ +
Sbjct: 429 IRVFEQHRADGLKLDRILVAIMINVYGKARQYSKLAELLEVMPKSGIQPDTRILKTVVEI 488
Query: 456 AKTADERNEANELLGNFN 473
+ A ELL N
Sbjct: 489 YEDGGMCENAAELLRKIN 506
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 93/354 (26%), Positives = 171/354 (48%), Gaps = 10/354 (2%)
Query: 123 NKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKF 182
++ G+ P + A R ++ E + M P Y +++K + +F
Sbjct: 16 SQDGFEPHFHLYVAFAHCLMRVQKWVALEILVDEMIGKNCPPDIKFYALVIKEAINTGRF 75
Query: 183 KEAEEVF--MTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTV 240
+ A+ F M LL PD +++++I Y K G + +A K F+ + + G+ +
Sbjct: 76 QTAQHWFSKMKLLG-----CPPDIVIYNILILEYGKRGNFSQAMKYFSQLKDEGLLPDSG 130
Query: 241 TYNSLMSFETNYKEVSK---IYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEM 297
TY +++S + K +M+ AG++PD V+Y++LI+ +GKA R E+A A F E+
Sbjct: 131 TYCAVLSACRKVGNIDKGNETLKEMREAGIKPDQVAYSILIDMFGKAGRHEDAAATFREL 190
Query: 298 LDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDM 357
+G P AYN L+ AFA GMVDQA VFK +R C D + TM+ Y A
Sbjct: 191 QMSGYLPDSVAYNTLIHAFAKVGMVDQATLVFKEAQRSFCLDDPVIFYTMIQVYAKARMA 250
Query: 358 EGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTI 417
+ A + +K+ G PN + YG+++ + + N ++++++M+ + + ++ + T+
Sbjct: 251 DQALHVLKLMKEIGLQPNELGYGSVLNAFMRANQPMGAIKLFEEMQESNCRFGESTYITM 310
Query: 418 MDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGN 471
++ Y K +A +M GF + A + L+ + + EA L
Sbjct: 311 LNVYSKAGFHSAAEELLAKMRQLGFRRNVVAYSTLIDMYGKVGKLQEATRLFST 364
Score = 139 bits (349), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 104/422 (24%), Positives = 184/422 (43%), Gaps = 41/422 (9%)
Query: 110 GDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTY 169
G F A+ S M G P +V + L+ YG+ G + A F +++ G P + TY
Sbjct: 73 GRFQTAQHWFSKMKLLGCPPDIVIYNILILEYGKRGNFSQAMKYFSQLKDEGLLPDSGTY 132
Query: 170 QIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFAL 229
+L + + E TL + ++ +KPDQ + ++I M+ KAG +E A F
Sbjct: 133 CAVLSACRKVGNIDKGNE---TLKEMREAGIKPDQVAYSILIDMFGKAGRHEDAAATFRE 189
Query: 230 MAERGVQQSTVTYNSLMSFETNYKEVSK---IYDQMQRAGLQPDVVSYALLINAYGKARR 286
+ G +V YN+L+ V + ++ + QR+ D V + +I Y KAR
Sbjct: 190 LQMSGYLPDSVAYNTLIHAFAKVGMVDQATLVFKEAQRSFCLDDPVIFYTMIQVYAKARM 249
Query: 287 EEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTT 346
++AL V + M + G++P Y +L+AF + A +F+ M+ C +Y T
Sbjct: 250 ADQALHVLKLMKEIGLQPNELGYGSVLNAFMRANQPMGAIKLFEEMQESNCRFGESTYIT 309
Query: 347 MLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNG 406
ML+ Y A AE+ +++Q GF NV+ Y TLI Y KV L++ ++ M+ G
Sbjct: 310 MLNVYSKAGFHSAAEELLAKMRQLGFRRNVVAYSTLIDMYGKVGKLQEATRLFSTMKQQG 369
Query: 407 IK-----------------------------------PNQTIFTTIMDAYGKNKDFDSAV 431
K P+ +TT+++AY + F+ +
Sbjct: 370 CKGNLIVYNTMLDMYGKAGRINDAERLMAELKDSKLVPDTVTYTTLINAYNRLGRFEECI 429
Query: 432 VWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGINGLSISVDEE 491
+++ + G D+ I++++ A + ++ ELL +P L V+
Sbjct: 430 RVFEQHRADGLKLDRILVAIMINVYGKARQYSKLAELLEVMPKSGIQPDTRILKTVVEIY 489
Query: 492 DD 493
+D
Sbjct: 490 ED 491
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 100/412 (24%), Positives = 179/412 (43%), Gaps = 35/412 (8%)
Query: 78 VVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTAL 137
V E +W++ Q ++ + ++ + + E ++ M K P + + +
Sbjct: 6 VSVEFYKWVKSQDGFEPHFHLYVAFAHCLMRVQKWVALEILVDEMIGKNCPPDIKFYALV 65
Query: 138 MEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEK 197
++ GR++ A+ F +M+ G P + Y I++ + + F +A + F L DE
Sbjct: 66 IKEAINTGRFQTAQHWFSKMKLLGCPPDIVIYNILILEYGKRGNFSQAMKYFSQLKDEGL 125
Query: 198 SP--------------------------------LKPDQKMFHMMIYMYKKAGGYEKARK 225
P +KPDQ + ++I M+ KAG +E A
Sbjct: 126 LPDSGTYCAVLSACRKVGNIDKGNETLKEMREAGIKPDQVAYSILIDMFGKAGRHEDAAA 185
Query: 226 LFALMAERGVQQSTVTYNSLMSFETNYKEVSK---IYDQMQRAGLQPDVVSYALLINAYG 282
F + G +V YN+L+ V + ++ + QR+ D V + +I Y
Sbjct: 186 TFRELQMSGYLPDSVAYNTLIHAFAKVGMVDQATLVFKEAQRSFCLDDPVIFYTMIQVYA 245
Query: 283 KARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDIC 342
KAR ++AL V + M + G++P Y +L+AF + A +F+ M+ C
Sbjct: 246 KARMADQALHVLKLMKEIGLQPNELGYGSVLNAFMRANQPMGAIKLFEEMQESNCRFGES 305
Query: 343 SYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKM 402
+Y TML+ Y A AE+ +++Q GF NV+ Y TLI Y KV L++ ++ M
Sbjct: 306 TYITMLNVYSKAGFHSAAEELLAKMRQLGFRRNVVAYSTLIDMYGKVGKLQEATRLFSTM 365
Query: 403 RVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLS 454
+ G K N ++ T++D YGK + A E++ PD L++
Sbjct: 366 KQQGCKGNLIVYNTMLDMYGKAGRINDAERLMAELKDSKLVPDTVTYTTLIN 417
Score = 41.6 bits (96), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 35/150 (23%), Positives = 63/150 (42%), Gaps = 5/150 (3%)
Query: 18 VFKDAADEAGKKNWRRLMNQIEEVGSAVAVLRSERTRGQPLPKDLVLGTLVRLKQLKKWN 77
+F + K N ++ G A + +ER + LV T+ + +N
Sbjct: 361 LFSTMKQQGCKGNLIVYNTMLDMYGKAGRINDAERLMAELKDSKLVPDTVTYTTLINAYN 420
Query: 78 VVSEVLEWLRI--QSWWDFNEMDFLM---LITAYGKQGDFNKAEKVLSFMNKKGYAPSVV 132
+ E +R+ Q D ++D ++ +I YGK ++K ++L M K G P
Sbjct: 421 RLGRFEECIRVFEQHRADGLKLDRILVAIMINVYGKARQYSKLAELLEVMPKSGIQPDTR 480
Query: 133 SHTALMEAYGRGGRYKNAEAIFRRMQSSGP 162
++E Y GG +NA + R++ GP
Sbjct: 481 ILKTVVEIYEDGGMCENAAELLRKINELGP 510
>gi|302761054|ref|XP_002963949.1| hypothetical protein SELMODRAFT_166434 [Selaginella moellendorffii]
gi|300167678|gb|EFJ34282.1| hypothetical protein SELMODRAFT_166434 [Selaginella moellendorffii]
Length = 1365
Score = 166 bits (419), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 100/401 (24%), Positives = 186/401 (46%), Gaps = 7/401 (1%)
Query: 72 QLKKWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSV 131
+LK W V L+ Q + N + L++AY + G+F +A + L M G P+
Sbjct: 658 KLKLWQNAEIVFRDLQ-QHGFAGNTSAYSALLSAYAETGNFERATRALDNMVAAGLQPNA 716
Query: 132 VSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMT 191
++EA+GR G+ K F+R+ G P++ T+ +I F +EA ++
Sbjct: 717 TCANYVLEAFGRAGKAKEISEFFQRLPEMGISPNSRTFVVIFHAFSRNGNLEEARSMYRQ 776
Query: 192 LLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFET- 250
+ +++ P ++F ++ +Y + A +L + + G++ YN ++S +
Sbjct: 777 M---KEAGFSPSIQVFKALLALYSRETVEIDAEELVKDIKKAGLELDIDIYNHMISLYSK 833
Query: 251 --NYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKA 308
+Y+ + ++ MQ G PD ++ LI Y + + +EA A+ EM+ G P
Sbjct: 834 LGSYRNAALVFKGMQEIGCSPDATTFNTLIMLYSRNQMVQEAQALLREMIKTGNAPNIST 893
Query: 309 YNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLK 368
Y L+ A+ + A VFK + C PD +Y M++ Y A + E+ ++K
Sbjct: 894 YTTLISAYGRLQAYEDAELVFKSIAETGCKPDATAYNVMINVYRKAGEHRKIEEIIEQMK 953
Query: 369 QDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFD 428
DGF P++ T L+ Y K K E+ + + G+ P+ +T+I++++ NKD+
Sbjct: 954 VDGFEPSLTTIHMLMDSYGKGGATGKAEEVLETLPEIGMSPDAIHYTSIINSHLNNKDYL 1013
Query: 429 SAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELL 469
SAV+W ++M P + A + + A LL
Sbjct: 1014 SAVIWLRKMTDACVRPTHVTITCFVGAASVCERSSHALMLL 1054
Score = 146 bits (369), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 82/324 (25%), Positives = 168/324 (51%), Gaps = 7/324 (2%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKN-AEAIFRRMQSS 160
L++ Y + GD+N +++L M +G P +V+ +++A RGG + A ++ + + ++
Sbjct: 131 LMSVYARHGDWNSVQQLLCRMQDRGCRPDLVTFNIVIKARTRGGMQEGLASSLLQDVYAA 190
Query: 161 GPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGY 220
G RP +TY ++ N+ +A +F + ++ PD ++ MI +Y +AG
Sbjct: 191 GLRPDTITYNTLISACSLNNRLSDAILIFEEM---QRQGCDPDIWTYNAMISVYGRAGRV 247
Query: 221 EKARKLFALMAERGVQQSTVTYNSLM---SFETNYKEVSKIYDQMQRAGLQPDVVSYALL 277
E A +F +M E+G VTYNS++ + + +EV +I M+ A D ++Y +
Sbjct: 248 EAASSIFRIMQEQGFTPDAVTYNSVLHAFARDGRIEEVERIRGMMRDARCSSDEITYNTM 307
Query: 278 INAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRC 337
I+ YGKA +A ++ +M + G P + +L+D +G V++A +F+ M + +
Sbjct: 308 IHMYGKAGMHRKAEELYVQMKEEGRCPDSVTFTVLIDTLGKAGFVNEAAAMFEDMLKSQV 367
Query: 338 SPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMME 397
P + +++ M+ AY A AE + + + G P+++ Y ++ + K EK +
Sbjct: 368 RPTLQAFSAMICAYAKADMFTDAEHTYSCMLRAGVRPDLLAYSVMLDVFFKAGMPEKCII 427
Query: 398 IYDKMRVNGIKPNQTIFTTIMDAY 421
+Y M +G+KP +++ ++ +
Sbjct: 428 LYKAMVGSGLKPELSVYAIMVRVF 451
Score = 138 bits (348), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 100/402 (24%), Positives = 173/402 (43%), Gaps = 45/402 (11%)
Query: 56 QPLPKDLVLGTLVRLKQLKKWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKA 115
Q P DL +V+ W E+ E L + W+ N ++++ G+ A
Sbjct: 53 QLAPTDLCY--VVKRVANTSWQRALELYECLNVARWYAPNPRMLAVMLSVLGRANQPGLA 110
Query: 116 EKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKL 175
+++ + V + +LM Y R G + + + + RMQ G RP +T
Sbjct: 111 QELFD-RAESSIGNCVQVYNSLMSVYARHGDWNSVQQLLCRMQDRGCRPDLVT------- 162
Query: 176 FVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEK-ARKLFALMAERG 234
F+++I + G E A L + G
Sbjct: 163 -------------------------------FNIVIKARTRGGMQEGLASSLLQDVYAAG 191
Query: 235 VQQSTVTYNSLMS---FETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEAL 291
++ T+TYN+L+S + I+++MQR G PD+ +Y +I+ YG+A R E A
Sbjct: 192 LRPDTITYNTLISACSLNNRLSDAILIFEEMQRQGCDPDIWTYNAMISVYGRAGRVEAAS 251
Query: 292 AVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAY 351
++F M + G P YN +L AFA G +++ + MR RCS D +Y TM+ Y
Sbjct: 252 SIFRIMQEQGFTPDAVTYNSVLHAFARDGRIEEVERIRGMMRDARCSSDEITYNTMIHMY 311
Query: 352 VNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQ 411
A AE+ + ++K++G P+ +T+ LI K + + +++ M + ++P
Sbjct: 312 GKAGMHRKAEELYVQMKEEGRCPDSVTFTVLIDTLGKAGFVNEAAAMFEDMLKSQVRPTL 371
Query: 412 TIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILL 453
F+ ++ AY K F A Y M G PD A +++L
Sbjct: 372 QAFSAMICAYAKADMFTDAEHTYSCMLRAGVRPDLLAYSVML 413
Score = 130 bits (326), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 78/271 (28%), Positives = 136/271 (50%), Gaps = 6/271 (2%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
LI+A + A + M ++G P + ++ A++ YGR GR + A +IFR MQ G
Sbjct: 202 LISACSLNNRLSDAILIFEEMQRQGCDPDIWTYNAMISVYGRAGRVEAASSIFRIMQEQG 261
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
P A+TY +L F + +E E + + D S D+ ++ MI+MY KAG +
Sbjct: 262 FTPDAVTYNSVLHAFARDGRIEEVERIRGMMRDARCSS---DEITYNTMIHMYGKAGMHR 318
Query: 222 KARKLFALMAERGVQQSTVTYNSLMSFETN---YKEVSKIYDQMQRAGLQPDVVSYALLI 278
KA +L+ M E G +VT+ L+ E + +++ M ++ ++P + +++ +I
Sbjct: 319 KAEELYVQMKEEGRCPDSVTFTVLIDTLGKAGFVNEAAAMFEDMLKSQVRPTLQAFSAMI 378
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCS 338
AY KA +A + ML AGVRP AY+++LD F +GM ++ ++K M
Sbjct: 379 CAYAKADMFTDAEHTYSCMLRAGVRPDLLAYSVMLDVFFKAGMPEKCIILYKAMVGSGLK 438
Query: 339 PDICSYTTMLSAYVNASDMEGAEKFFRRLKQ 369
P++ Y M+ + S + E + + Q
Sbjct: 439 PELSVYAIMVRVFYQKSSVAEIENLSKEMVQ 469
Score = 121 bits (304), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 82/333 (24%), Positives = 154/333 (46%), Gaps = 10/333 (3%)
Query: 161 GPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGY 220
P P L ++L + AN+ A+E+F D +S + ++++ ++ +Y + G +
Sbjct: 88 APNPRMLA--VMLSVLGRANQPGLAQELF----DRAESSIGNCVQVYNSLMSVYARHGDW 141
Query: 221 EKARKLFALMAERGVQQSTVTYNSLMSFET--NYKE--VSKIYDQMQRAGLQPDVVSYAL 276
++L M +RG + VT+N ++ T +E S + + AGL+PD ++Y
Sbjct: 142 NSVQQLLCRMQDRGCRPDLVTFNIVIKARTRGGMQEGLASSLLQDVYAAGLRPDTITYNT 201
Query: 277 LINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDR 336
LI+A R +A+ +FEEM G P YN ++ + +G V+ A ++F+ M+
Sbjct: 202 LISACSLNNRLSDAILIFEEMQRQGCDPDIWTYNAMISVYGRAGRVEAASSIFRIMQEQG 261
Query: 337 CSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMM 396
+PD +Y ++L A+ +E E+ ++ + ITY T+I Y K K
Sbjct: 262 FTPDAVTYNSVLHAFARDGRIEEVERIRGMMRDARCSSDEITYNTMIHMYGKAGMHRKAE 321
Query: 397 EIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLA 456
E+Y +M+ G P+ FT ++D GK + A +++M P +A + ++
Sbjct: 322 ELYVQMKEEGRCPDSVTFTVLIDTLGKAGFVNEAAAMFEDMLKSQVRPTLQAFSAMICAY 381
Query: 457 KTADERNEANELLGNFNHPNNEPGINGLSISVD 489
AD +A P + S+ +D
Sbjct: 382 AKADMFTDAEHTYSCMLRAGVRPDLLAYSVMLD 414
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 96/426 (22%), Positives = 185/426 (43%), Gaps = 41/426 (9%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
L K G F++AE+ + G L+ +Y R G A A F M + G
Sbjct: 547 LAVMLAKAGRFSEAEEEMRTSQTYGQVQVSDFLKVLVASYDRAGMQDEALARFLDMTTEG 606
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
A Q + + A E+ L+D + D M +I Y K ++
Sbjct: 607 LEMDAEVLQTAVMCYCRKGFAFVAHEL---LIDCLHAFDVKDSAMHVAIIASYGKLKLWQ 663
Query: 222 KARKLFALMAERGVQQSTVTYNSLMSF--ET-NYKEVSKIYDQMQRAGLQPDVVSYALLI 278
A +F + + G +T Y++L+S ET N++ ++ D M AGLQP+ ++
Sbjct: 664 NAEIVFRDLQQHGFAGNTSAYSALLSAYAETGNFERATRALDNMVAAGLQPNATCANYVL 723
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCS 338
A+G+A + +E F+ + + G+ P + + ++ AF+ +G +++AR++++ M+ S
Sbjct: 724 EAFGRAGKAKEISEFFQRLPEMGISPNSRTFVVIFHAFSRNGNLEEARSMYRQMKEAGFS 783
Query: 339 P-----------------------------------DICSYTTMLSAYVNASDMEGAEKF 363
P DI Y M+S Y A
Sbjct: 784 PSIQVFKALLALYSRETVEIDAEELVKDIKKAGLELDIDIYNHMISLYSKLGSYRNAALV 843
Query: 364 FRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGK 423
F+ +++ G P+ T+ TLI Y++ +++ + +M G PN + +TT++ AYG+
Sbjct: 844 FKGMQEIGCSPDATTFNTLIMLYSRNQMVQEAQALLREMIKTGNAPNISTYTTLISAYGR 903
Query: 424 NKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGING 483
+ ++ A + +K + G PD A N+++++ + A E + E++ EP +
Sbjct: 904 LQAYEDAELVFKSIAETGCKPDATAYNVMINVYRKAGEHRKIEEIIEQMKVDGFEPSLTT 963
Query: 484 LSISVD 489
+ + +D
Sbjct: 964 IHMLMD 969
Score = 95.1 bits (235), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 59/234 (25%), Positives = 107/234 (45%), Gaps = 6/234 (2%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
+I+ Y K G + A V M + G +P + L+ Y R + A+A+ R M +G
Sbjct: 827 MISLYSKLGSYRNAALVFKGMQEIGCSPDATTFNTLIMLYSRNQMVQEAQALLREMIKTG 886
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
P+ TY ++ + +++AE VF ++ + + KPD +++MI +Y+KAG +
Sbjct: 887 NAPNISTYTTLISAYGRLQAYEDAELVFKSIAE---TGCKPDATAYNVMINVYRKAGEHR 943
Query: 222 KARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSK---IYDQMQRAGLQPDVVSYALLI 278
K ++ M G + S T + LM K + + + G+ PD + Y +I
Sbjct: 944 KIEEIIEQMKVDGFEPSLTTIHMLMDSYGKGGATGKAEEVLETLPEIGMSPDAIHYTSII 1003
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCM 332
N++ + A+ +M DA VRPTH + A ++ A + K +
Sbjct: 1004 NSHLNNKDYLSAVIWLRKMTDACVRPTHVTITCFVGAASVCERSSHALMLLKAL 1057
>gi|262316879|emb|CAZ44328.1| restoring pentatricopeptide repeat protein homologue [Raphanus
sativus]
Length = 681
Score = 166 bits (419), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 134/542 (24%), Positives = 239/542 (44%), Gaps = 65/542 (11%)
Query: 5 APRKFMQKRRKVEVFKDAAD-EAGKKNWR----RLMNQIEEV-GSAVAV-LRSERTRGQP 57
A R F + + + K + D E+G+ +R +L + E+ G A+ L S+ R +P
Sbjct: 14 AARLFCTRSIRHALAKKSRDGESGEAGFRGESLKLRSGFHEIKGLEDAIDLFSDMVRSRP 73
Query: 58 LPKDL----VLGTLVRL----------KQLKKWNVVSEVLEW-LRIQSWWDFNEMDFLML 102
LP + ++G +VR+ +++++ + +V + + I+ + +++ F +
Sbjct: 74 LPSVIDFNKLMGVVVRMERPDLVISLYQKMERKQIPCDVYSFNILIKCFCSCSKLPFAL- 132
Query: 103 ITAYGKQGDFNKAEKVLSF------------------MNKKGYAPSVVSHTALMEAYGRG 144
+ +GK V++F + + P+VV+ T LM R
Sbjct: 133 -STFGKITKLGFQPDVVTFSTLLHGLCVEDRVSEALDLFHQMCRPNVVTFTTLMNGLCRE 191
Query: 145 GRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQ 204
GR A A+ RM G +P+ +TY I+ + A + + EE S +KP+
Sbjct: 192 GRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKIGDTVSALNLLRKM--EEMSHIKPNV 249
Query: 205 KMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLM---SFETNYKEVSKIYDQ 261
++ +I K G + A L+ M E+G+ TYN ++ + E ++ +
Sbjct: 250 VIYSAIIDGLWKDGRHSDAHNLYTEMQEKGIFPDLFTYNCMIDGFCSSGRWSEAQRLLQE 309
Query: 262 MQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGM 321
M + P+VV+Y+ LINAY K R+ EA +++EML G+ P YN ++D F
Sbjct: 310 MLERKINPNVVTYSALINAYVKERKFFEAEELYDEMLPRGIIPNTITYNSMIDGFCKQNR 369
Query: 322 VDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGT 381
+D A +F M CSPD+ ++ T++ Y A ++ + + + G V + TY T
Sbjct: 370 LDAAEHMFYVMATKGCSPDVFTFNTLIDGYCGAKRIDDGTELLHEMTETGLVADTTTYNT 429
Query: 382 LIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESC- 440
LI G+ V +L +++ +M +G+ P+ T++D N A+ +K M+
Sbjct: 430 LIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSK 489
Query: 441 ----------GFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPG-------ING 483
G PD + NIL+S + EA EL H P ING
Sbjct: 490 MDLDASRPFNGVEPDVQTYNILISGLINEGKFLEAEELYKEMPHRGIVPNTITYSSMING 549
Query: 484 LS 485
L
Sbjct: 550 LC 551
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 107/434 (24%), Positives = 195/434 (44%), Gaps = 22/434 (5%)
Query: 30 NWRRLMNQIEEVGSAV-AVLRSERTRGQPL-PKDLVLGTLVRLKQLKKWNVVS--EVLEW 85
+ LMN + G V AV +R L P + GT+V K + VS +L
Sbjct: 180 TFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVD-GMCKIGDTVSALNLLRK 238
Query: 86 LRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGG 145
+ S N + + +I K G + A + + M +KG P + ++ +++ + G
Sbjct: 239 MEEMSHIKPNVVIYSAIIDGLWKDGRHSDAHNLYTEMQEKGIFPDLFTYNCMIDGFCSSG 298
Query: 146 RYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQK 205
R+ A+ + + M P+ +TY ++ +V+ KF EAEE++ +L + P+
Sbjct: 299 RWSEAQRLLQEMLERKINPNVVTYSALINAYVKERKFFEAEELYDEMLPR---GIIPNTI 355
Query: 206 MFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEV---SKIYDQM 262
++ MI + K + A +F +MA +G T+N+L+ K + +++ +M
Sbjct: 356 TYNSMIDGFCKQNRLDAAEHMFYVMATKGCSPDVFTFNTLIDGYCGAKRIDDGTELLHEM 415
Query: 263 QRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMV 322
GL D +Y LI+ + AL + ++M+ +GV P N LLD +G +
Sbjct: 416 TETGLVADTTTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKL 475
Query: 323 DQARTVFKCMRRDR-----------CSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDG 371
A +FK M++ + PD+ +Y ++S +N AE+ ++ + G
Sbjct: 476 KDALEMFKAMQKSKMDLDASRPFNGVEPDVQTYNILISGLINEGKFLEAEELYKEMPHRG 535
Query: 372 FVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAV 431
VPN ITY ++I G K + L++ +++D M P+ F T++ Y K D +
Sbjct: 536 IVPNTITYSSMINGLCKQSRLDEATQMFDSMGSKSFSPDVVTFNTLVSGYCKAGRVDDGL 595
Query: 432 VWYKEMESCGFPPD 445
+ EM G D
Sbjct: 596 ELFCEMGRRGIVAD 609
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 98/382 (25%), Positives = 189/382 (49%), Gaps = 17/382 (4%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
+I + G +++A+++L M ++ P+VV+++AL+ AY + ++ AE ++ M G
Sbjct: 290 MIDGFCSSGRWSEAQRLLQEMLERKINPNVVTYSALINAYVKERKFFEAEELYDEMLPRG 349
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
P+ +TY ++ F + N+ AE +F + + SP D F+ +I Y A +
Sbjct: 350 IIPNTITYNSMIDGFCKQNRLDAAEHMFYVMATKGCSP---DVFTFNTLIDGYCGAKRID 406
Query: 222 KARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSKIYD---QMQRAGLQPDVVSYALLI 278
+L M E G+ T TYN+L+ +++ D QM +G+ PD+V+ L+
Sbjct: 407 DGTELLHEMTETGLVADTTTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLL 466
Query: 279 NAYGKARREEEALAVFEEM------LDA-----GVRPTHKAYNILLDAFAISGMVDQART 327
+ + ++AL +F+ M LDA GV P + YNIL+ G +A
Sbjct: 467 DGLCDNGKLKDALEMFKAMQKSKMDLDASRPFNGVEPDVQTYNILISGLINEGKFLEAEE 526
Query: 328 VFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYA 387
++K M P+ +Y++M++ S ++ A + F + F P+V+T+ TL+ GY
Sbjct: 527 LYKEMPHRGIVPNTITYSSMINGLCKQSRLDEATQMFDSMGSKSFSPDVVTFNTLVSGYC 586
Query: 388 KVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQK 447
K ++ +E++ +M GI + + T++ + K + + A+ ++EM S G PD
Sbjct: 587 KAGRVDDGLELFCEMGRRGIVADAITYITLIHGFRKVGNINGALDIFQEMISSGVYPDTI 646
Query: 448 AKNILLSLAKTADERNEANELL 469
+L++ + +E A +L
Sbjct: 647 TIRSMLTVLWSKEELKRAVAML 668
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 85/378 (22%), Positives = 182/378 (48%), Gaps = 18/378 (4%)
Query: 75 KWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSH 134
+W+ +L+ + ++ + N + + LI AY K+ F +AE++ M +G P+ +++
Sbjct: 299 RWSEAQRLLQEM-LERKINPNVVTYSALINAYVKERKFFEAEELYDEMLPRGIIPNTITY 357
Query: 135 TALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLD 194
++++ + + R AE +F M + G P T+ ++ + A + + E+ L +
Sbjct: 358 NSMIDGFCKQNRLDAAEHMFYVMATKGCSPDVFTFNTLIDGYCGAKRIDDGTEL---LHE 414
Query: 195 EEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETN--- 251
++ L D ++ +I+ + G A L M GV VT N+L+ +
Sbjct: 415 MTETGLVADTTTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGK 474
Query: 252 YKEVSKIYDQMQRA-----------GLQPDVVSYALLINAYGKARREEEALAVFEEMLDA 300
K+ +++ MQ++ G++PDV +Y +LI+ + EA +++EM
Sbjct: 475 LKDALEMFKAMQKSKMDLDASRPFNGVEPDVQTYNILISGLINEGKFLEAEELYKEMPHR 534
Query: 301 GVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGA 360
G+ P Y+ +++ +D+A +F M SPD+ ++ T++S Y A ++
Sbjct: 535 GIVPNTITYSSMINGLCKQSRLDEATQMFDSMGSKSFSPDVVTFNTLVSGYCKAGRVDDG 594
Query: 361 EKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDA 420
+ F + + G V + ITY TLI G+ KV N+ ++I+ +M +G+ P+ +++
Sbjct: 595 LELFCEMGRRGIVADAITYITLIHGFRKVGNINGALDIFQEMISSGVYPDTITIRSMLTV 654
Query: 421 YGKNKDFDSAVVWYKEME 438
++ AV ++++
Sbjct: 655 LWSKEELKRAVAMLEDLQ 672
>gi|302826107|ref|XP_002994593.1| hypothetical protein SELMODRAFT_138846 [Selaginella moellendorffii]
gi|300137364|gb|EFJ04344.1| hypothetical protein SELMODRAFT_138846 [Selaginella moellendorffii]
Length = 521
Score = 166 bits (419), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 117/450 (26%), Positives = 203/450 (45%), Gaps = 44/450 (9%)
Query: 61 DLVLGTLVRLKQLKKWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLS 120
D + +V K W V+++ EW+ + + + + +LI AYGK + AEK +
Sbjct: 69 DNFMSVVVHFWNYKDWPRVTQMCEWVLQGTTFRPDLGCYNLLIDAYGKSLNIEDAEKTFN 128
Query: 121 FMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEAN 180
M + P+ + L+ Y G ++ AE +F +MQ G P L L + +A
Sbjct: 129 RMQEALCVPNEETFGVLINGYRLAGSFEKAEELFVQMQKRGYSPGPLACNTFLHVLEDAK 188
Query: 181 KFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTV 240
+++ AE +F D EK +P+ ++ MI +Y KAG KA L+ M +
Sbjct: 189 EYRRAEALFR---DLEKYECEPNIDTYNRMIVIYGKAGEPSKAEMLYRSMRRAMCPPNIC 245
Query: 241 TYNSLM---SFETNYKEVSKIYDQ-----------------------------------M 262
T+ +LM + + Y+E + +D+ M
Sbjct: 246 TFTALMNAFARQGLYREAERYFDKLQEFDYKPDHYAYNALMEAYSQGGSPAGALEIFQTM 305
Query: 263 QRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMV 322
QR G PD VS+ +LINAYG+A E+A +F+ M AG P K+ +LL A+A +G V
Sbjct: 306 QRNGCFPDTVSHNILINAYGRAGLYEDAEKIFKSMQSAGFSPNLKSNMLLLSAYARAGRV 365
Query: 323 DQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDG---FVPNVITY 379
++A + M RD PD Y ++++AY + E E ++ + P++ TY
Sbjct: 366 EEAEELVSAMERDGTKPDTLIYNSLINAYGVSGRHEDMEALLAKMVKSSSKQTKPDIGTY 425
Query: 380 GTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMES 439
TLI+ YA+ + + E++ + + P+ T +T +M Y K K + K+M
Sbjct: 426 NTLIQVYAQAGFIPRAEELFQGLARLKLVPDATTWTALMGGYAKKKLYRKCTSILKKMLE 485
Query: 440 CGFPPDQKAKNILLSLAKTADERNEANELL 469
G D +L S ++ ++ + +L+
Sbjct: 486 SGCRADAVTARVLFSACRSPEQVEQVTQLM 515
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 77/308 (25%), Positives = 148/308 (48%), Gaps = 9/308 (2%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
+I YGK G+ +KAE + M + P++ + TALM A+ R G Y+ AE F ++Q
Sbjct: 215 MIVIYGKAGEPSKAEMLYRSMRRAMCPPNICTFTALMNAFARQGLYREAERYFDKLQEFD 274
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
+P Y +++ + + A E+F T+ +++ PD +++I Y +AG YE
Sbjct: 275 YKPDHYAYNALMEAYSQGGSPAGALEIFQTM---QRNGCFPDTVSHNILINAYGRAGLYE 331
Query: 222 KARKLFALMAERGVQ---QSTVTYNSLMSFETNYKEVSKIYDQMQRAGLQPDVVSYALLI 278
A K+F M G +S + S + +E ++ M+R G +PD + Y LI
Sbjct: 332 DAEKIFKSMQSAGFSPNLKSNMLLLSAYARAGRVEEAEELVSAMERDGTKPDTLIYNSLI 391
Query: 279 NAYGKARREEEALAVFEEMLDAG---VRPTHKAYNILLDAFAISGMVDQARTVFKCMRRD 335
NAYG + R E+ A+ +M+ + +P YN L+ +A +G + +A +F+ + R
Sbjct: 392 NAYGVSGRHEDMEALLAKMVKSSSKQTKPDIGTYNTLIQVYAQAGFIPRAEELFQGLARL 451
Query: 336 RCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKM 395
+ PD ++T ++ Y +++ + G + +T L +E++
Sbjct: 452 KLVPDATTWTALMGGYAKKKLYRKCTSILKKMLESGCRADAVTARVLFSACRSPEQVEQV 511
Query: 396 MEIYDKMR 403
++ + ++
Sbjct: 512 TQLMESLQ 519
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 75/307 (24%), Positives = 148/307 (48%), Gaps = 10/307 (3%)
Query: 196 EKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMS---FETNY 252
+ + +PD ++++I Y K+ E A K F M E + T+ L++ ++
Sbjct: 96 QGTTFRPDLGCYNLLIDAYGKSLNIEDAEKTFNRMQEALCVPNEETFGVLINGYRLAGSF 155
Query: 253 KEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNIL 312
++ +++ QMQ+ G P ++ ++ A+ A A+F ++ P YN +
Sbjct: 156 EKAEELFVQMQKRGYSPGPLACNTFLHVLEDAKEYRRAEALFRDLEKYECEPNIDTYNRM 215
Query: 313 LDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGF 372
+ + +G +A +++ MRR C P+IC++T +++A+ AE++F +L++ +
Sbjct: 216 IVIYGKAGEPSKAEMLYRSMRRAMCPPNICTFTALMNAFARQGLYREAERYFDKLQEFDY 275
Query: 373 VPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVV 432
P+ Y L++ Y++ + +EI+ M+ NG P+ +++AYG+ ++ A
Sbjct: 276 KPDHYAYNALMEAYSQGGSPAGALEIFQTMQRNGCFPDTVSHNILINAYGRAGLYEDAEK 335
Query: 433 WYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPG-------INGLS 485
+K M+S GF P+ K+ +LLS A EA EL+ +P IN
Sbjct: 336 IFKSMQSAGFSPNLKSNMLLLSAYARAGRVEEAEELVSAMERDGTKPDTLIYNSLINAYG 395
Query: 486 ISVDEED 492
+S ED
Sbjct: 396 VSGRHED 402
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 107/220 (48%), Gaps = 7/220 (3%)
Query: 241 TYNSLMSFET---NYKEVSKIYDQ----MQRAGLQPDVVSYALLINAYGKARREEEALAV 293
T+++ MS NYK+ ++ +Q +PD+ Y LLI+AYGK+ E+A
Sbjct: 67 TWDNFMSVVVHFWNYKDWPRVTQMCEWVLQGTTFRPDLGCYNLLIDAYGKSLNIEDAEKT 126
Query: 294 FEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVN 353
F M +A P + + +L++ + ++G ++A +F M++ SP + T L +
Sbjct: 127 FNRMQEALCVPNEETFGVLINGYRLAGSFEKAEELFVQMQKRGYSPGPLACNTFLHVLED 186
Query: 354 ASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTI 413
A + AE FR L++ PN+ TY +I Y K K +Y MR PN
Sbjct: 187 AKEYRRAEALFRDLEKYECEPNIDTYNRMIVIYGKAGEPSKAEMLYRSMRRAMCPPNICT 246
Query: 414 FTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILL 453
FT +M+A+ + + A ++ +++ + PD A N L+
Sbjct: 247 FTALMNAFARQGLYREAERYFDKLQEFDYKPDHYAYNALM 286
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 99/200 (49%), Gaps = 3/200 (1%)
Query: 101 MLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSS 160
+LI AYG+ G + AEK+ M G++P++ S+ L+ AY R GR + AE + M+
Sbjct: 319 ILINAYGRAGLYEDAEKIFKSMQSAGFSPNLKSNMLLLSAYARAGRVEEAEELVSAMERD 378
Query: 161 GPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGY 220
G +P L Y ++ + + + ++ E + ++ KPD ++ +I +Y +AG
Sbjct: 379 GTKPDTLIYNSLINAYGVSGRHEDMEALLAKMVKSSSKQTKPDIGTYNTLIQVYAQAGFI 438
Query: 221 EKARKLFALMAERGVQQSTVTYNSLMSFETN---YKEVSKIYDQMQRAGLQPDVVSYALL 277
+A +LF +A + T+ +LM Y++ + I +M +G + D V+ +L
Sbjct: 439 PRAEELFQGLARLKLVPDATTWTALMGGYAKKKLYRKCTSILKKMLESGCRADAVTARVL 498
Query: 278 INAYGKARREEEALAVFEEM 297
+A + E+ + E +
Sbjct: 499 FSACRSPEQVEQVTQLMESL 518
>gi|50508175|dbj|BAD30981.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
gi|50508218|dbj|BAD31653.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
Length = 918
Score = 165 bits (418), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 98/347 (28%), Positives = 169/347 (48%), Gaps = 6/347 (1%)
Query: 103 ITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGP 162
I A G + A ++ M KG P+V ++TAL+ G K A +F RM G
Sbjct: 327 IIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGV 386
Query: 163 RPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEK 222
P+ +TY ++ + VE + K A F+ L ++ P+ ++ MI Y G +K
Sbjct: 387 FPNTVTYNALINILVENRRIKYA---FVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKK 443
Query: 223 ARKLFALMAERGVQQSTVTYNSLMSFET---NYKEVSKIYDQMQRAGLQPDVVSYALLIN 279
A + M +RG + VTYN+++ N +I D M+ G +PD SY LI
Sbjct: 444 AMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELIC 503
Query: 280 AYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSP 339
+ K + E A +F EM+D G+ P Y L+D + +D A ++ + M+R C P
Sbjct: 504 GFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRP 563
Query: 340 DICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIY 399
++ +Y ++ ++ GAE+ + + ++G PNV+TY +I G K + +E++
Sbjct: 564 NVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMF 623
Query: 400 DKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQ 446
+KM G PN +++++ A G+ + A + E+E G PD+
Sbjct: 624 NKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDE 670
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 87/367 (23%), Positives = 171/367 (46%), Gaps = 16/367 (4%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + + +I A K G+ AE ++ + + +P ++T+++ + R +A +F
Sbjct: 214 NLLIYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVF 273
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEA-----EEVFMTLLDEEKSPLKPDQKMFHM 209
+M G P+ +TY ++ ++ + EA E + +L + P + M
Sbjct: 274 NQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDM 333
Query: 210 MIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMS---FETNYKEVSKIYDQMQRAG 266
G YE A +LF M +G + + TY +L+S K ++ +M R G
Sbjct: 334 --------GCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDG 385
Query: 267 LQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQAR 326
+ P+ V+Y LIN + RR + A V M G P YN ++ + I G +A
Sbjct: 386 VFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAM 445
Query: 327 TVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGY 386
V M + S ++ +Y T++ Y ++ + A + ++ G P+ +Y LI G+
Sbjct: 446 LVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGF 505
Query: 387 AKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQ 446
K++ +E ++++M +G+ PN+ +T ++D Y K++ D+A + M+ G P+
Sbjct: 506 CKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNV 565
Query: 447 KAKNILL 453
+ N+L+
Sbjct: 566 QTYNVLI 572
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 96/425 (22%), Positives = 176/425 (41%), Gaps = 41/425 (9%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
LI + + + L +++ G + +++AL+ R G + RM S G
Sbjct: 151 LIKSCHSKEAMARTMSFLDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEG 210
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
+P+ L Y ++ + +AE + + + E SP D + MI + + +
Sbjct: 211 VQPNLLIYNAVINALCKDGNVADAETIMKKVFESEMSP---DTFTYTSMILGHCRKHDLD 267
Query: 222 KARKLFALMAERGVQQSTVTYNSLM-----SFETN------------------------- 251
A ++F MA+ G + +TVTY++L+ S N
Sbjct: 268 SALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPI 327
Query: 252 --------YKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVR 303
Y++ +++ M+ G +P+V +Y LI+ + + A+ +F M GV
Sbjct: 328 IALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVF 387
Query: 304 PTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKF 363
P YN L++ + + A V M R+ CSP+I +Y M+ Y D + A
Sbjct: 388 PNTVTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLV 447
Query: 364 FRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGK 423
+ Q G N++TY T+IKGY N + I D MR G KP++ +T ++ + K
Sbjct: 448 MNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCK 507
Query: 424 NKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGING 483
+SA + EM G P++ L+ ++ + A LL + P +
Sbjct: 508 ISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQT 567
Query: 484 LSISV 488
++ +
Sbjct: 568 YNVLI 572
Score = 128 bits (321), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 111/471 (23%), Positives = 190/471 (40%), Gaps = 47/471 (9%)
Query: 19 FKDAADEAGKK----NWRRLMNQIEEVGSAVAVL-RSERTRGQPLPKDLVLGTLVRLKQL 73
F D ++G + + L+ + +G AV+ R R + + +L++ V
Sbjct: 167 FLDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLIYNAVINALC 226
Query: 74 KKWNVV-SEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVV 132
K NV +E + +S + + +I + ++ D + A +V + M K+G P+ V
Sbjct: 227 KDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCEPNTV 286
Query: 133 SHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTL 192
+++ L+ GR A + R M G P+A T + + +++A +F
Sbjct: 287 TYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWRLF--- 343
Query: 193 LDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNY 252
+D + +P+ + +I +G + A LF M+ GV +TVTYN+L++
Sbjct: 344 VDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALINILVEN 403
Query: 253 KEVS---KIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAY 309
+ + + + M R G P++V+Y +I Y ++A+ V ML G Y
Sbjct: 404 RRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTY 463
Query: 310 NILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQ 369
N ++ + SG A + MR C PD SYT ++ + S ME A F +
Sbjct: 464 NTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVD 523
Query: 370 DGFVPN-----------------------------------VITYGTLIKGYAKVNNLEK 394
DG PN V TY LI G K NN
Sbjct: 524 DGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSG 583
Query: 395 MMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPD 445
E+ M GI PN +T ++D KN A+ + +M G P+
Sbjct: 584 AEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPN 634
Score = 124 bits (312), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 100/383 (26%), Positives = 177/383 (46%), Gaps = 24/383 (6%)
Query: 94 FNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAI 153
+NEM I Y GD KA V++ M ++G++ ++V++ +++ Y G +A I
Sbjct: 428 YNEM-----IKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRI 482
Query: 154 FRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYM 213
M+ G +P +Y ++ F + +K + A +F ++D+ L P++ + +I
Sbjct: 483 LDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDG---LCPNEVTYTALIDG 539
Query: 214 YKKAGGYEKARKLFALMAERGVQQSTVTYNSL---MSFETNYKEVSKIYDQMQRAGLQPD 270
Y K + A L M G + + TYN L ++ + N+ ++ M G+ P+
Sbjct: 540 YCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPN 599
Query: 271 VVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFK 330
VV+Y +I+ K AL +F +M++ G P Y+ L+ A G V++A +F
Sbjct: 600 VVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFA 659
Query: 331 CMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVN 390
+ R PD +Y M+ AY+ + +E A F R+ + G P + TYG LIKG
Sbjct: 660 ELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKGLKN-- 717
Query: 391 NLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYG-KNKDFDSAVVWYKEMESCGFPPDQKAK 449
E ++ + + PN + +G + D D+ V ++ + +
Sbjct: 718 --EYLLADQRLAALPDVVPNCS--------FGYQTTDQDAVSVMSAKLAELDPGLSVQVQ 767
Query: 450 NILLSLAKTADERNEANELLGNF 472
N L+S TA EANELLG+
Sbjct: 768 NALVSNLSTAGRWFEANELLGSM 790
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 92/376 (24%), Positives = 152/376 (40%), Gaps = 41/376 (10%)
Query: 74 KKWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVS 133
+K + + +LE ++ +S N + +LI KQ +F+ AE++ M ++G P+VV+
Sbjct: 544 EKLDTATSLLEHMK-RSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVT 602
Query: 134 HTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLL 193
+TA+++ + G A +F +M G P+ LTY +++ + K +EAE +F L
Sbjct: 603 YTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAEL- 661
Query: 194 DEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYK 253
E+ L PD+ + MI Y +G E A M + G Q + TY L+ N
Sbjct: 662 --ERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKGLKNEY 719
Query: 254 EVSKIYDQMQRAGLQPDVVSYA--------------------------------LLINAY 281
++ QR PDVV L++
Sbjct: 720 LLAD-----QRLAALPDVVPNCSFGYQTTDQDAVSVMSAKLAELDPGLSVQVQNALVSNL 774
Query: 282 GKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDI 341
A R EA + M+ G+ P +AYN LL + VD A VFK M C +
Sbjct: 775 STAGRWFEANELLGSMISQGLCPDQEAYNSLLCSLLRVRNVDLAMGVFKHMSTQGCEVHL 834
Query: 342 CSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDK 401
Y ++ A + A F + + P+ + LI G + + ME
Sbjct: 835 NGYKELICALCQLHRRKEARITFENMLMRTWNPDDVVQAVLIDGLLRDGYKDLCMEFLHI 894
Query: 402 MRVNGIKPNQTIFTTI 417
M P+ I+T +
Sbjct: 895 METRRYMPSFHIYTIL 910
>gi|302794005|ref|XP_002978767.1| hypothetical protein SELMODRAFT_109632 [Selaginella moellendorffii]
gi|300153576|gb|EFJ20214.1| hypothetical protein SELMODRAFT_109632 [Selaginella moellendorffii]
Length = 521
Score = 165 bits (418), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 118/450 (26%), Positives = 202/450 (44%), Gaps = 44/450 (9%)
Query: 61 DLVLGTLVRLKQLKKWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLS 120
D + +V K W V+++ EW+ + + + + +LI AYGK + AEK +
Sbjct: 69 DNFMSVVVHFWNYKDWPRVTQMCEWVLQGTAFRPDLGCYNLLIDAYGKSLNIEDAEKTFN 128
Query: 121 FMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEAN 180
M + P+ + L+ Y G ++ AE +F +MQ G P L L + +A
Sbjct: 129 RMQEALCVPNEETFGVLINGYRLAGSFEKAEELFVQMQKRGYSPGPLACNTFLHVLEDAK 188
Query: 181 KFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTV 240
+++ AE +F D EK +P+ ++ MI +Y KAG KA L+ M +
Sbjct: 189 EYRRAEALFR---DLEKYECEPNIDTYNRMIVIYGKAGEPSKAEMLYRSMRRAMCPPNIC 245
Query: 241 TYNSLM---SFETNYKEVSKIYDQ-----------------------------------M 262
T+ +LM + + Y+E + +D+ M
Sbjct: 246 TFTALMNAFARQGLYREAERYFDKLQEFDYKPDHYAYNALMEAYSQGGSPAGALEIFQTM 305
Query: 263 QRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMV 322
QR G PD VS+ +LINAYG+A E+A +F+ M AG P K+ +LL A+A +G V
Sbjct: 306 QRNGCFPDTVSHNILINAYGRAGLYEDAEKIFKSMQSAGFSPNLKSNMLLLSAYARAGRV 365
Query: 323 DQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDG---FVPNVITY 379
++A + M RD PD Y +++AY + E E ++ + P++ TY
Sbjct: 366 EEAEELVSAMERDGTKPDTLIYNALINAYGVSGRHEDMEALLAKMVKSSSKQTKPDIGTY 425
Query: 380 GTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMES 439
TLI+ YA+ + K E++ + + P+ T +T +M Y K K + K+M
Sbjct: 426 NTLIQVYAQAGFIPKAEELFQGLARLKLVPDATTWTALMGGYAKKKLYRKCTSILKKMLE 485
Query: 440 CGFPPDQKAKNILLSLAKTADERNEANELL 469
G D +L S ++ ++ + +L+
Sbjct: 486 SGCRADAVTARVLFSACRSPEQVEQVTQLM 515
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 77/308 (25%), Positives = 148/308 (48%), Gaps = 9/308 (2%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
+I YGK G+ +KAE + M + P++ + TALM A+ R G Y+ AE F ++Q
Sbjct: 215 MIVIYGKAGEPSKAEMLYRSMRRAMCPPNICTFTALMNAFARQGLYREAERYFDKLQEFD 274
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
+P Y +++ + + A E+F T+ +++ PD +++I Y +AG YE
Sbjct: 275 YKPDHYAYNALMEAYSQGGSPAGALEIFQTM---QRNGCFPDTVSHNILINAYGRAGLYE 331
Query: 222 KARKLFALMAERGVQ---QSTVTYNSLMSFETNYKEVSKIYDQMQRAGLQPDVVSYALLI 278
A K+F M G +S + S + +E ++ M+R G +PD + Y LI
Sbjct: 332 DAEKIFKSMQSAGFSPNLKSNMLLLSAYARAGRVEEAEELVSAMERDGTKPDTLIYNALI 391
Query: 279 NAYGKARREEEALAVFEEMLDAG---VRPTHKAYNILLDAFAISGMVDQARTVFKCMRRD 335
NAYG + R E+ A+ +M+ + +P YN L+ +A +G + +A +F+ + R
Sbjct: 392 NAYGVSGRHEDMEALLAKMVKSSSKQTKPDIGTYNTLIQVYAQAGFIPKAEELFQGLARL 451
Query: 336 RCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKM 395
+ PD ++T ++ Y +++ + G + +T L +E++
Sbjct: 452 KLVPDATTWTALMGGYAKKKLYRKCTSILKKMLESGCRADAVTARVLFSACRSPEQVEQV 511
Query: 396 MEIYDKMR 403
++ + ++
Sbjct: 512 TQLMESLQ 519
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 75/307 (24%), Positives = 148/307 (48%), Gaps = 10/307 (3%)
Query: 196 EKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMS---FETNY 252
+ + +PD ++++I Y K+ E A K F M E + T+ L++ ++
Sbjct: 96 QGTAFRPDLGCYNLLIDAYGKSLNIEDAEKTFNRMQEALCVPNEETFGVLINGYRLAGSF 155
Query: 253 KEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNIL 312
++ +++ QMQ+ G P ++ ++ A+ A A+F ++ P YN +
Sbjct: 156 EKAEELFVQMQKRGYSPGPLACNTFLHVLEDAKEYRRAEALFRDLEKYECEPNIDTYNRM 215
Query: 313 LDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGF 372
+ + +G +A +++ MRR C P+IC++T +++A+ AE++F +L++ +
Sbjct: 216 IVIYGKAGEPSKAEMLYRSMRRAMCPPNICTFTALMNAFARQGLYREAERYFDKLQEFDY 275
Query: 373 VPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVV 432
P+ Y L++ Y++ + +EI+ M+ NG P+ +++AYG+ ++ A
Sbjct: 276 KPDHYAYNALMEAYSQGGSPAGALEIFQTMQRNGCFPDTVSHNILINAYGRAGLYEDAEK 335
Query: 433 WYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPG-------INGLS 485
+K M+S GF P+ K+ +LLS A EA EL+ +P IN
Sbjct: 336 IFKSMQSAGFSPNLKSNMLLLSAYARAGRVEEAEELVSAMERDGTKPDTLIYNALINAYG 395
Query: 486 ISVDEED 492
+S ED
Sbjct: 396 VSGRHED 402
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 107/220 (48%), Gaps = 7/220 (3%)
Query: 241 TYNSLMSFET---NYKEVSKIYDQ----MQRAGLQPDVVSYALLINAYGKARREEEALAV 293
T+++ MS NYK+ ++ +Q +PD+ Y LLI+AYGK+ E+A
Sbjct: 67 TWDNFMSVVVHFWNYKDWPRVTQMCEWVLQGTAFRPDLGCYNLLIDAYGKSLNIEDAEKT 126
Query: 294 FEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVN 353
F M +A P + + +L++ + ++G ++A +F M++ SP + T L +
Sbjct: 127 FNRMQEALCVPNEETFGVLINGYRLAGSFEKAEELFVQMQKRGYSPGPLACNTFLHVLED 186
Query: 354 ASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTI 413
A + AE FR L++ PN+ TY +I Y K K +Y MR PN
Sbjct: 187 AKEYRRAEALFRDLEKYECEPNIDTYNRMIVIYGKAGEPSKAEMLYRSMRRAMCPPNICT 246
Query: 414 FTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILL 453
FT +M+A+ + + A ++ +++ + PD A N L+
Sbjct: 247 FTALMNAFARQGLYREAERYFDKLQEFDYKPDHYAYNALM 286
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 99/200 (49%), Gaps = 3/200 (1%)
Query: 101 MLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSS 160
+LI AYG+ G + AEK+ M G++P++ S+ L+ AY R GR + AE + M+
Sbjct: 319 ILINAYGRAGLYEDAEKIFKSMQSAGFSPNLKSNMLLLSAYARAGRVEEAEELVSAMERD 378
Query: 161 GPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGY 220
G +P L Y ++ + + + ++ E + ++ KPD ++ +I +Y +AG
Sbjct: 379 GTKPDTLIYNALINAYGVSGRHEDMEALLAKMVKSSSKQTKPDIGTYNTLIQVYAQAGFI 438
Query: 221 EKARKLFALMAERGVQQSTVTYNSLMSFETN---YKEVSKIYDQMQRAGLQPDVVSYALL 277
KA +LF +A + T+ +LM Y++ + I +M +G + D V+ +L
Sbjct: 439 PKAEELFQGLARLKLVPDATTWTALMGGYAKKKLYRKCTSILKKMLESGCRADAVTARVL 498
Query: 278 INAYGKARREEEALAVFEEM 297
+A + E+ + E +
Sbjct: 499 FSACRSPEQVEQVTQLMESL 518
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/116 (25%), Positives = 52/116 (44%)
Query: 367 LKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKD 426
L+ F P++ Y LI Y K N+E + +++M+ PN+ F +++ Y
Sbjct: 95 LQGTAFRPDLGCYNLLIDAYGKSLNIEDAEKTFNRMQEALCVPNEETFGVLINGYRLAGS 154
Query: 427 FDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGIN 482
F+ A + +M+ G+ P A N L + + A E A L + EP I+
Sbjct: 155 FEKAEELFVQMQKRGYSPGPLACNTFLHVLEDAKEYRRAEALFRDLEKYECEPNID 210
>gi|224065693|ref|XP_002301924.1| predicted protein [Populus trichocarpa]
gi|222843650|gb|EEE81197.1| predicted protein [Populus trichocarpa]
Length = 709
Score = 165 bits (418), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 105/409 (25%), Positives = 202/409 (49%), Gaps = 9/409 (2%)
Query: 52 RTRGQPLPKDLVLGTLVRLKQLKKWNVVSEVLEWLRIQSWWDFNEMDFLM---LITAYGK 108
R R P DLV +L+ +K S +L+ + + D E+D + +I + K
Sbjct: 224 RMREDGYPSDLVNYSLIIRSLMKNNRANSSILQKIYREIDRDKLEVDVQLWNDIIVGFAK 283
Query: 109 QGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALT 168
GD +KA + L + G + + ++ G GR + AEAIF M+ +G +P
Sbjct: 284 AGDLDKALEFLGVVQGSGLSVKTATLVTVIWGLGNCGRTEEAEAIFEEMRDNGLQPRTRA 343
Query: 169 YQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFA 228
Y +L+ +V+A ++AE V + E+S + P+++ + ++I Y A +E AR +
Sbjct: 344 YNALLRGYVKAGLLRDAEFVVSEM---ERSGVLPNEQTYSLLIDAYGNAERWESARIVLK 400
Query: 229 LMAERGVQQSTVTYNSLMSF---ETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKAR 285
M VQ + ++ +++ + +++ ++ +M+ +G++PD + Y +LI+ +GK
Sbjct: 401 EMEASNVQPNAYVFSRILASYRDKGEWQKTFQVLREMEDSGVRPDRIFYNVLIDTFGKFN 460
Query: 286 REEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYT 345
+ A+A F+ ML G+ P +N L+D +G D+A +F+ M P ++
Sbjct: 461 CLDHAMATFDRMLSEGIEPDTITWNTLVDCHCKAGKHDRAEELFEEMMEKGYLPCNTTFN 520
Query: 346 TMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVN 405
M++++ + + + ++ G +PN +TY TLI Y K + +E D M+
Sbjct: 521 IMINSFGDQERWDDVKNLLTNMRSQGLLPNAVTYTTLIDIYGKSGRFDDAIECLDDMKAA 580
Query: 406 GIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLS 454
G+KP+ T++ +++AY + D AV + M G P A N L++
Sbjct: 581 GLKPSSTMYNALLNAYAQRGLSDQAVSAFWAMRDDGLKPSLLALNSLIN 629
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 92/359 (25%), Positives = 172/359 (47%), Gaps = 6/359 (1%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
L+ Y K G AE V+S M + G P+ +++ L++AYG R+++A + + M++S
Sbjct: 347 LLRGYVKAGLLRDAEFVVSEMERSGVLPNEQTYSLLIDAYGNAERWESARIVLKEMEASN 406
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
+P+A + IL + + E ++ F L + E S ++PD+ ++++I + K +
Sbjct: 407 VQPNAYVFSRILASYRDKG---EWQKTFQVLREMEDSGVRPDRIFYNVLIDTFGKFNCLD 463
Query: 222 KARKLFALMAERGVQQSTVTYNSLMSFETN---YKEVSKIYDQMQRAGLQPDVVSYALLI 278
A F M G++ T+T+N+L+ + +++++M G P ++ ++I
Sbjct: 464 HAMATFDRMLSEGIEPDTITWNTLVDCHCKAGKHDRAEELFEEMMEKGYLPCNTTFNIMI 523
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCS 338
N++G R ++ + M G+ P Y L+D + SG D A M+
Sbjct: 524 NSFGDQERWDDVKNLLTNMRSQGLLPNAVTYTTLIDIYGKSGRFDDAIECLDDMKAAGLK 583
Query: 339 PDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEI 398
P Y +L+AY + A F ++ DG P+++ +LI + K + +
Sbjct: 584 PSSTMYNALLNAYAQRGLSDQAVSAFWAMRDDGLKPSLLALNSLINAFGKDRRDVEAFVV 643
Query: 399 YDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAK 457
M+ N +KP+ +TT+M A + FD Y+EM G PD+KA+ +L S K
Sbjct: 644 LQYMKENDLKPDVVTYTTLMKALILVEKFDKVPSVYEEMILSGCTPDRKARAMLRSALK 702
Score = 142 bits (359), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 83/350 (23%), Positives = 171/350 (48%), Gaps = 6/350 (1%)
Query: 99 FLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQ 158
+ +I G G +AE + M G P ++ AL+ Y + G ++AE + M+
Sbjct: 309 LVTVIWGLGNCGRTEEAEAIFEEMRDNGLQPRTRAYNALLRGYVKAGLLRDAEFVVSEME 368
Query: 159 SSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAG 218
SG P+ TY +++ + A +++ A + L + E S ++P+ +F ++ Y+ G
Sbjct: 369 RSGVLPNEQTYSLLIDAYGNAERWESAR---IVLKEMEASNVQPNAYVFSRILASYRDKG 425
Query: 219 GYEKARKLFALMAERGVQQSTVTYNSLMSFETNYK---EVSKIYDQMQRAGLQPDVVSYA 275
++K ++ M + GV+ + YN L+ + +D+M G++PD +++
Sbjct: 426 EWQKTFQVLREMEDSGVRPDRIFYNVLIDTFGKFNCLDHAMATFDRMLSEGIEPDTITWN 485
Query: 276 LLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRD 335
L++ + KA + + A +FEEM++ G P + +NI++++F D + + MR
Sbjct: 486 TLVDCHCKAGKHDRAEELFEEMMEKGYLPCNTTFNIMINSFGDQERWDDVKNLLTNMRSQ 545
Query: 336 RCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKM 395
P+ +YTT++ Y + + A + +K G P+ Y L+ YA+ ++
Sbjct: 546 GLLPNAVTYTTLIDIYGKSGRFDDAIECLDDMKAAGLKPSSTMYNALLNAYAQRGLSDQA 605
Query: 396 MEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPD 445
+ + MR +G+KP+ ++++A+GK++ A V + M+ PD
Sbjct: 606 VSAFWAMRDDGLKPSLLALNSLINAFGKDRRDVEAFVVLQYMKENDLKPD 655
Score = 139 bits (349), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 95/402 (23%), Positives = 173/402 (43%), Gaps = 43/402 (10%)
Query: 93 DFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNA-- 150
+ + + LI+A + D KA ++ M + GY +V+++ ++ + + R ++
Sbjct: 196 NLTPLTYNALISACARNNDIEKALNLICRMREDGYPSDLVNYSLIIRSLMKNNRANSSIL 255
Query: 151 EAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMM 210
+ I+R + + I+ F +A +A E + + S L +
Sbjct: 256 QKIYREIDRDKLEVDVQLWNDIIVGFAKAGDLDKALEFLGVV---QGSGLSVKTATLVTV 312
Query: 211 IYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETN---YKEVSKIYDQMQRAGL 267
I+ G E+A +F M + G+Q T YN+L+ ++ + +M+R+G+
Sbjct: 313 IWGLGNCGRTEEAEAIFEEMRDNGLQPRTRAYNALLRGYVKAGLLRDAEFVVSEMERSGV 372
Query: 268 QPDVVSYALLINAYGKARREEEA-----------------------------------LA 292
P+ +Y+LLI+AYG A R E A
Sbjct: 373 LPNEQTYSLLIDAYGNAERWESARIVLKEMEASNVQPNAYVFSRILASYRDKGEWQKTFQ 432
Query: 293 VFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYV 352
V EM D+GVRP YN+L+D F +D A F M + PD ++ T++ +
Sbjct: 433 VLREMEDSGVRPDRIFYNVLIDTFGKFNCLDHAMATFDRMLSEGIEPDTITWNTLVDCHC 492
Query: 353 NASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQT 412
A + AE+ F + + G++P T+ +I + + + + MR G+ PN
Sbjct: 493 KAGKHDRAEELFEEMMEKGYLPCNTTFNIMINSFGDQERWDDVKNLLTNMRSQGLLPNAV 552
Query: 413 IFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLS 454
+TT++D YGK+ FD A+ +M++ G P N LL+
Sbjct: 553 TYTTLIDIYGKSGRFDDAIECLDDMKAAGLKPSSTMYNALLN 594
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 96/394 (24%), Positives = 187/394 (47%), Gaps = 11/394 (2%)
Query: 82 VLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAY 141
V+ WL+ + E+ + +LI A G+ K + K+ P +++ AL+ A
Sbjct: 155 VVSWLQKHNLCFSYELLYSILIHALGQS---EKLYEAFLLSQKQNLTP--LTYNALISAC 209
Query: 142 GRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDE-EKSPL 200
R + A + RM+ G + Y +I++ ++ N+ + + + E ++ L
Sbjct: 210 ARNNDIEKALNLICRMREDGYPSDLVNYSLIIRSLMKNNRANSS--ILQKIYREIDRDKL 267
Query: 201 KPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNY---KEVSK 257
+ D ++++ +I + KAG +KA + ++ G+ T T +++ N +E
Sbjct: 268 EVDVQLWNDIIVGFAKAGDLDKALEFLGVVQGSGLSVKTATLVTVIWGLGNCGRTEEAEA 327
Query: 258 IYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFA 317
I+++M+ GLQP +Y L+ Y KA +A V EM +GV P + Y++L+DA+
Sbjct: 328 IFEEMRDNGLQPRTRAYNALLRGYVKAGLLRDAEFVVSEMERSGVLPNEQTYSLLIDAYG 387
Query: 318 ISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVI 377
+ + AR V K M P+ ++ +L++Y + + + + R ++ G P+ I
Sbjct: 388 NAERWESARIVLKEMEASNVQPNAYVFSRILASYRDKGEWQKTFQVLREMEDSGVRPDRI 447
Query: 378 TYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEM 437
Y LI + K N L+ M +D+M GI+P+ + T++D + K D A ++EM
Sbjct: 448 FYNVLIDTFGKFNCLDHAMATFDRMLSEGIEPDTITWNTLVDCHCKAGKHDRAEELFEEM 507
Query: 438 ESCGFPPDQKAKNILLSLAKTADERNEANELLGN 471
G+ P NI+++ + ++ LL N
Sbjct: 508 MEKGYLPCNTTFNIMINSFGDQERWDDVKNLLTN 541
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 86/210 (40%), Gaps = 42/210 (20%)
Query: 74 KKWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVS 133
++W+ V +L +R Q N + + LI YGK G F+ A + L M G PS
Sbjct: 530 ERWDDVKNLLTNMRSQGLLP-NAVTYTTLIDIYGKSGRFDDAIECLDDMKAAGLKPSSTM 588
Query: 134 HTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLL 193
+ AL+ AY + G A + F M+ G +PS L ++ F K + E F+ L
Sbjct: 589 YNALLNAYAQRGLSDQAVSAFWAMRDDGLKPSLLALNSLINAF---GKDRRDVEAFVVLQ 645
Query: 194 DEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMS---FET 250
+++ LKPD VTY +LM
Sbjct: 646 YMKENDLKPD-----------------------------------VVTYTTLMKALILVE 670
Query: 251 NYKEVSKIYDQMQRAGLQPDVVSYALLINA 280
+ +V +Y++M +G PD + A+L +A
Sbjct: 671 KFDKVPSVYEEMILSGCTPDRKARAMLRSA 700
>gi|15221549|ref|NP_176454.1| RNA processing factor 2 [Arabidopsis thaliana]
gi|193806496|sp|Q9SXD1.2|PPR91_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g62670, mitochondrial; Flags: Precursor
gi|332195871|gb|AEE33992.1| RNA processing factor 2 [Arabidopsis thaliana]
Length = 630
Score = 165 bits (418), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 115/478 (24%), Positives = 220/478 (46%), Gaps = 46/478 (9%)
Query: 44 AVAVLRSERTRGQPLPKDLVLGTLVR-LKQLKKWNVVSEVLEWLRIQSWWDFNEMDFLML 102
AVA L E + +P P + L+ + ++ K++VV + E ++ N + +L
Sbjct: 65 AVA-LFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQ-NLGIPHNHYTYSIL 122
Query: 103 ITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGP 162
I + ++ A VL M K GY P++V+ ++L+ Y R A A+ +M +G
Sbjct: 123 INCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGY 182
Query: 163 RPSALTYQIILKLFVEANKFKEAEEVFMTLLDE--------------------------- 195
+P+ +T+ ++ NK EA M L+D
Sbjct: 183 QPNTVTFNTLIHGLFLHNKASEA----MALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTD 238
Query: 196 ---------EKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLM 246
E+ L+P +++ +I K + A LF M +G++ + VTY+SL+
Sbjct: 239 LAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLI 298
Query: 247 SFETNY---KEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVR 303
S NY + S++ M + PDV +++ LI+A+ K + EA +++EM+ +
Sbjct: 299 SCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSID 358
Query: 304 PTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKF 363
P+ Y+ L++ F + +D+A+ +F+ M C PD+ +Y T++ + +E +
Sbjct: 359 PSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEV 418
Query: 364 FRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGK 423
FR + Q G V N +TY LI+G + + + EI+ +M +G+ PN + T++D K
Sbjct: 419 FREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCK 478
Query: 424 NKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGI 481
N + A+V ++ ++ P NI++ A + + +L N + +P +
Sbjct: 479 NGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDV 536
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 94/372 (25%), Positives = 177/372 (47%), Gaps = 6/372 (1%)
Query: 101 MLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSS 160
+++ K+GD + A +L+ M + P V+ + +++ + +A +F+ M++
Sbjct: 226 VVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETK 285
Query: 161 GPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGY 220
G RP+ +TY ++ ++ +A + +++ + + PD F +I + K G
Sbjct: 286 GIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERK---INPDVFTFSALIDAFVKEGKL 342
Query: 221 EKARKLFALMAERGVQQSTVTYNSLM---SFETNYKEVSKIYDQMQRAGLQPDVVSYALL 277
+A KL+ M +R + S VTY+SL+ E ++++ M PDVV+Y L
Sbjct: 343 VEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTL 402
Query: 278 INAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRC 337
I + K +R EE + VF EM G+ YNIL+ +G D A+ +FK M D
Sbjct: 403 IKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGV 462
Query: 338 SPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMME 397
P+I +Y T+L +E A F L++ P + TY +I+G K +E +
Sbjct: 463 PPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWD 522
Query: 398 IYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAK 457
++ + + G+KP+ + T++ + + + A +KEM+ G P+ N L+
Sbjct: 523 LFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARL 582
Query: 458 TADERNEANELL 469
+R + EL+
Sbjct: 583 RDGDREASAELI 594
Score = 151 bits (382), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 89/337 (26%), Positives = 167/337 (49%), Gaps = 6/337 (1%)
Query: 122 MNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANK 181
M KG P+VV++++L+ GR+ +A + M P T+ ++ FV+ K
Sbjct: 282 METKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGK 341
Query: 182 FKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVT 241
EAE+++ ++ K + P + +I + ++A+++F M + VT
Sbjct: 342 LVEAEKLYDEMV---KRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVT 398
Query: 242 YNSLMSFETNYKEVSK---IYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEML 298
YN+L+ YK V + ++ +M + GL + V+Y +LI +A + A +F+EM+
Sbjct: 399 YNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMV 458
Query: 299 DAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDME 358
GV P YN LLD +G +++A VF+ ++R + P I +Y M+ A +E
Sbjct: 459 SDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVE 518
Query: 359 GAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIM 418
F L G P+V+ Y T+I G+ + + E+ ++ +M+ +G PN + T++
Sbjct: 519 DGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLI 578
Query: 419 DAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSL 455
A ++ D +++ KEM SCGF D ++ ++
Sbjct: 579 RARLRDGDREASAELIKEMRSCGFAGDASTIGLVTNM 615
Score = 135 bits (341), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 84/315 (26%), Positives = 166/315 (52%), Gaps = 6/315 (1%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + + LI+ G ++ A ++LS M ++ P V + +AL++A+ + G+ AE ++
Sbjct: 290 NVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLY 349
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
M PS +TY ++ F ++ EA+++F ++ + PD ++ +I +
Sbjct: 350 DEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKH---CFPDVVTYNTLIKGF 406
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSLMS--FETNYKEVSK-IYDQMQRAGLQPDV 271
K E+ ++F M++RG+ +TVTYN L+ F+ ++++ I+ +M G+ P++
Sbjct: 407 CKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNI 466
Query: 272 VSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKC 331
++Y L++ K + E+A+ VFE + + + PT YNI+++ +G V+ +F
Sbjct: 467 MTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCN 526
Query: 332 MRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNN 391
+ PD+ +Y TM+S + E A+ F+ +K+DG +PN Y TLI+ + +
Sbjct: 527 LSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGD 586
Query: 392 LEKMMEIYDKMRVNG 406
E E+ +MR G
Sbjct: 587 REASAELIKEMRSCG 601
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/270 (23%), Positives = 120/270 (44%), Gaps = 3/270 (1%)
Query: 223 ARKLFALMAERGVQQSTVTYNSLMSF---ETNYKEVSKIYDQMQRAGLQPDVVSYALLIN 279
A LF M + S + ++ L+S + V + +QMQ G+ + +Y++LIN
Sbjct: 65 AVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILIN 124
Query: 280 AYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSP 339
+ + + ALAV +M+ G P + LL+ + S + +A + M P
Sbjct: 125 CFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQP 184
Query: 340 DICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIY 399
+ ++ T++ + A R+ G P+++TYG ++ G K + + +
Sbjct: 185 NTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLL 244
Query: 400 DKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTA 459
+KM ++P I+ TI+D K K D A+ +KEME+ G P+ + L+S
Sbjct: 245 NKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNY 304
Query: 460 DERNEANELLGNFNHPNNEPGINGLSISVD 489
++A+ LL + P + S +D
Sbjct: 305 GRWSDASRLLSDMIERKINPDVFTFSALID 334
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/239 (23%), Positives = 111/239 (46%), Gaps = 10/239 (4%)
Query: 58 LPKDLVLGTLVRLKQLKKWNVVSEVLEWLRIQSWWDF--NEMDFLMLITAYGKQGDFNKA 115
P + TL+ K K+ V E +E R S N + + +LI + GD + A
Sbjct: 393 FPDVVTYNTLI--KGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMA 450
Query: 116 EKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKL 175
+++ M G P+++++ L++ + G+ + A +F +Q S P+ TY I+++
Sbjct: 451 QEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEG 510
Query: 176 FVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGV 235
+A K ++ ++F L +KPD ++ MI + + G E+A LF M E G
Sbjct: 511 MCKAGKVEDGWDLFCNL---SLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGT 567
Query: 236 QQSTVTYNSLMSF---ETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEAL 291
++ YN+L+ + + + +++ +M+ G D + L+ N R ++ L
Sbjct: 568 LPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLVTNMLHDGRLDKSFL 626
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 38/177 (21%), Positives = 73/177 (41%)
Query: 322 VDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGT 381
+D A +F M + R P I ++ +LSA + + +++ G N TY
Sbjct: 62 LDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSI 121
Query: 382 LIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCG 441
LI + + + L + + KM G +PN +++++ Y +K AV +M G
Sbjct: 122 LINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTG 181
Query: 442 FPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGINGLSISVDEEDDDDDDD 498
+ P+ N L+ ++ +EA L+ +P + + V+ D D
Sbjct: 182 YQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTD 238
>gi|302806665|ref|XP_002985064.1| hypothetical protein SELMODRAFT_424099 [Selaginella moellendorffii]
gi|300147274|gb|EFJ13939.1| hypothetical protein SELMODRAFT_424099 [Selaginella moellendorffii]
Length = 1636
Score = 165 bits (418), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 110/424 (25%), Positives = 200/424 (47%), Gaps = 12/424 (2%)
Query: 41 VGSAVAVLRSERTRGQPLPKDLVLGTLVRLKQLKKWNVVSEVLEWL--RIQSWWDFNEMD 98
V +A+ +L TRG P D+V T V + L K + V E + IQ N +
Sbjct: 281 VENALWLLEQMVTRG--CPPDVVSYTTV-INGLCKLDQVDEACRVMDKMIQRGCQPNVIT 337
Query: 99 FLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQ 158
+ L+ + + GD + A +++ M ++GY P+ +++ +M + R + A + + M
Sbjct: 338 YGTLVDGFCRVGDLDGAVELVRKMTERGYRPNAITYNNIMHVFCRRNDMERAHQVLQMMI 397
Query: 159 SSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAG 218
+G P A+ Y I+ F +A K +EA ++ ++ + +PD +I KA
Sbjct: 398 QTGCPPDAINYSTIISGFCKAGKLREAHDLLEQMI---RRGCRPDVACLSTLIDALCKAA 454
Query: 219 GYEKARKLFALMAERGVQQSTVTYNSLMSFETNYK---EVSKIYDQMQRAGLQPDVVSYA 275
+ A++L + V Y+ L+ K E D M + PDVV+Y
Sbjct: 455 AIDSAQELLRMSIGMDCAPDVVAYSILIHALCKAKRLPEAESWLDVMVKNRCYPDVVTYN 514
Query: 276 LLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRD 335
+++ K+RR +A +F+ M AGV P Y+I++ +F +D A + + M+
Sbjct: 515 SVVDGLCKSRRINDAFLLFDRMRAAGVMPDVVTYSIVIHSFCKDNNLDSAFKMLERMKEA 574
Query: 336 RCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKM 395
+C PD+ +Y+ +++ A ++ A F+ + G PN++TY TLI G K+N +E+
Sbjct: 575 KCVPDVVTYSALINGLCKAGTVDKAFDVFQEMLGCGCAPNLVTYNTLIDGLCKINKVEQA 634
Query: 396 MEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILL-S 454
E+ + MR P+ +T +++ + A +EM+ G PD+ LL +
Sbjct: 635 AEMLEIMRKQSCTPDSITYTCLINGLCNASRLEEAWRVLREMKDKGCLPDRMTYGTLLRA 694
Query: 455 LAKT 458
L KT
Sbjct: 695 LQKT 698
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 107/457 (23%), Positives = 218/457 (47%), Gaps = 13/457 (2%)
Query: 40 EVGSAVAVLRSERTRGQPLPKDLVLGTLV--RLKQLKKWNVVSEVLEWLRIQSWWDFNEM 97
++G+A +L+ G +P++++L +V L +K + E+ + + +
Sbjct: 892 DIGTAYELLKEMPRHG--VPQNVILHNVVIKGLCSARKLDSALELFKEMEESGSCPPDVF 949
Query: 98 DFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRM 157
+ ++ + K G + A +++ M KG +P+VV++++L+ + G+ A A+ +RM
Sbjct: 950 TYSTIVDSLVKSGKVDDACRLVEDMVSKGCSPNVVTYSSLLHGLCKAGKLDEATALLQRM 1009
Query: 158 QSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKA 217
SG P+ +TY I+ + + EA + ++D +P+ + +++ + K
Sbjct: 1010 TRSGCSPNIVTYNTIIDGHCKLGRIDEAYHLLEEMVD---GGCQPNVVTYTVLLDAFCKC 1066
Query: 218 GGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEV---SKIYDQMQRAGLQPDVVSY 274
G E A L +M E+G + TYNSL+ EV ++ M + G P+VVSY
Sbjct: 1067 GKAEDAIGLVEVMVEKGYVPNLFTYNSLLDMFCKKDEVERACQLLSSMIQKGCVPNVVSY 1126
Query: 275 ALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRR 334
+I KA + E + + E+ML P +N ++DA + VD A +F ++
Sbjct: 1127 NTVIAGLCKATKVHEGVLLLEQMLSNNCVPDIVTFNTIIDAMCKTYRVDIAYELFNLIQE 1186
Query: 335 DRCSPDICSYTTMLSAYVNASDMEGAEKFFRRL-KQDGFVPNVITYGTLIKGYAKVNNLE 393
C+P++ +Y +++ + + AE R + ++ G P++ITY T+I G K ++
Sbjct: 1187 SGCTPNLVTYNSLVHGLCKSRRFDQAEYLLREMTRKQGCSPDIITYNTVIDGLCKSKRVD 1246
Query: 394 KMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILL 453
+ +++ +M +G+ P+ ++ ++ + K + D A + M GF P L+
Sbjct: 1247 RAYKLFLQMLSDGLAPDDVTYSIVISSLCKWRFMDEANNVLELMLKNGFDPGAITYGTLI 1306
Query: 454 -SLAKTADERNEANELLGNFNHPNNEPGINGLSISVD 489
KT + ++A E+L + P + SI +D
Sbjct: 1307 DGFCKTGN-LDKALEILQLLLSKGSYPDVVTFSIFID 1342
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 95/325 (29%), Positives = 165/325 (50%), Gaps = 7/325 (2%)
Query: 81 EVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEA 140
+VL+ + IQ+ + +++ +I+ + K G +A +L M ++G P V + L++A
Sbjct: 391 QVLQMM-IQTGCPPDAINYSTIISGFCKAGKLREAHDLLEQMIRRGCRPDVACLSTLIDA 449
Query: 141 YGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPL 200
+ +A+ + R P + Y I++ +A + EAE ++ K+
Sbjct: 450 LCKAAAIDSAQELLRMSIGMDCAPDVVAYSILIHALCKAKRLPEAESWLDVMV---KNRC 506
Query: 201 KPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLM-SF--ETNYKEVSK 257
PD ++ ++ K+ A LF M GV VTY+ ++ SF + N K
Sbjct: 507 YPDVVTYNSVVDGLCKSRRINDAFLLFDRMRAAGVMPDVVTYSIVIHSFCKDNNLDSAFK 566
Query: 258 IYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFA 317
+ ++M+ A PDVV+Y+ LIN KA ++A VF+EML G P YN L+D
Sbjct: 567 MLERMKEAKCVPDVVTYSALINGLCKAGTVDKAFDVFQEMLGCGCAPNLVTYNTLIDGLC 626
Query: 318 ISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVI 377
V+QA + + MR+ C+PD +YT +++ NAS +E A + R +K G +P+ +
Sbjct: 627 KINKVEQAAEMLEIMRKQSCTPDSITYTCLINGLCNASRLEEAWRVLREMKDKGCLPDRM 686
Query: 378 TYGTLIKGYAKVNNLEKMMEIYDKM 402
TYGTL++ K NNLE + ++ +M
Sbjct: 687 TYGTLLRALQKTNNLELVEQLLKEM 711
Score = 155 bits (392), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 97/398 (24%), Positives = 190/398 (47%), Gaps = 14/398 (3%)
Query: 61 DLVLGTLVRLKQLKKWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLS 120
+ +L L+RLK+ K + L+ R + N F +LI + GD A ++L
Sbjct: 848 NCLLQALLRLKRPK------DALQVYRNKLCCSPNMFTFTILIHGLCRAGDIGTAYELLK 901
Query: 121 FMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPS-ALTYQIILKLFVEA 179
M + G +V+ H +++ + +A +F+ M+ SG P TY I+ V++
Sbjct: 902 EMPRHGVPQNVILHNVVIKGLCSARKLDSALELFKEMEESGSCPPDVFTYSTIVDSLVKS 961
Query: 180 NKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQST 239
K +A + ++ + SP + + +++ KAG ++A L M G +
Sbjct: 962 GKVDDACRLVEDMVSKGCSP---NVVTYSSLLHGLCKAGKLDEATALLQRMTRSGCSPNI 1018
Query: 240 VTYNSLMSFETNYKEVSKIY---DQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEE 296
VTYN+++ + + Y ++M G QP+VV+Y +L++A+ K + E+A+ + E
Sbjct: 1019 VTYNTIIDGHCKLGRIDEAYHLLEEMVDGGCQPNVVTYTVLLDAFCKCGKAEDAIGLVEV 1078
Query: 297 MLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASD 356
M++ G P YN LLD F V++A + M + C P++ SY T+++ A+
Sbjct: 1079 MVEKGYVPNLFTYNSLLDMFCKKDEVERACQLLSSMIQKGCVPNVVSYNTVIAGLCKATK 1138
Query: 357 MEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTT 416
+ ++ + VP+++T+ T+I K ++ E+++ ++ +G PN + +
Sbjct: 1139 VHEGVLLLEQMLSNNCVPDIVTFNTIIDAMCKTYRVDIAYELFNLIQESGCTPNLVTYNS 1198
Query: 417 IMDAYGKNKDFDSAVVWYKEM-ESCGFPPDQKAKNILL 453
++ K++ FD A +EM G PD N ++
Sbjct: 1199 LVHGLCKSRRFDQAEYLLREMTRKQGCSPDIITYNTVI 1236
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 88/382 (23%), Positives = 185/382 (48%), Gaps = 10/382 (2%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
+I K + A ++L M G+AP+V S+ ++ + + R +NA + +M + G
Sbjct: 236 MINGLSKSDRLDDAIRLLEEMVDNGFAPNVFSYNTVLHGFCKANRVENALWLLEQMVTRG 295
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
P ++Y ++ + ++ EA V ++ + +P+ + ++ + + G +
Sbjct: 296 CPPDVVSYTTVINGLCKLDQVDEACRVMDKMI---QRGCQPNVITYGTLVDGFCRVGDLD 352
Query: 222 KARKLFALMAERGVQQSTVTYNSLMSF---ETNYKEVSKIYDQMQRAGLQPDVVSYALLI 278
A +L M ERG + + +TYN++M + + ++ M + G PD ++Y+ +I
Sbjct: 353 GAVELVRKMTERGYRPNAITYNNIMHVFCRRNDMERAHQVLQMMIQTGCPPDAINYSTII 412
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCS 338
+ + KA + EA + E+M+ G RP + L+DA + +D A+ + + C+
Sbjct: 413 SGFCKAGKLREAHDLLEQMIRRGCRPDVACLSTLIDALCKAAAIDSAQELLRMSIGMDCA 472
Query: 339 PDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEI 398
PD+ +Y+ ++ A A + AE + + ++ P+V+TY +++ G K + +
Sbjct: 473 PDVVAYSILIHALCKAKRLPEAESWLDVMVKNRCYPDVVTYNSVVDGLCKSRRINDAFLL 532
Query: 399 YDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNIL---LSL 455
+D+MR G+ P+ ++ ++ ++ K+ + DSA + M+ PD + L L
Sbjct: 533 FDRMRAAGVMPDVVTYSIVIHSFCKDNNLDSAFKMLERMKEAKCVPDVVTYSALINGLCK 592
Query: 456 AKTADERNEA-NELLGNFNHPN 476
A T D+ + E+LG PN
Sbjct: 593 AGTVDKAFDVFQEMLGCGCAPN 614
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 92/379 (24%), Positives = 183/379 (48%), Gaps = 7/379 (1%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + + L+ K G ++A +L M + G +P++V++ +++ + + GR A +
Sbjct: 982 NVVTYSSLLHGLCKAGKLDEATALLQRMTRSGCSPNIVTYNTIIDGHCKLGRIDEAYHLL 1041
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
M G +P+ +TY ++L F + K ++A + ++++ P + ++ ++ M+
Sbjct: 1042 EEMVDGGCQPNVVTYTVLLDAFCKCGKAEDAIGLVEVMVEKGYVP---NLFTYNSLLDMF 1098
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSLMSF---ETNYKEVSKIYDQMQRAGLQPDV 271
K E+A +L + M ++G + V+YN++++ T E + +QM PD+
Sbjct: 1099 CKKDEVERACQLLSSMIQKGCVPNVVSYNTVIAGLCKATKVHEGVLLLEQMLSNNCVPDI 1158
Query: 272 VSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKC 331
V++ +I+A K R + A +F + ++G P YN L+ S DQA + +
Sbjct: 1159 VTFNTIIDAMCKTYRVDIAYELFNLIQESGCTPNLVTYNSLVHGLCKSRRFDQAEYLLRE 1218
Query: 332 M-RRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVN 390
M R+ CSPDI +Y T++ + ++ A K F ++ DG P+ +TY +I K
Sbjct: 1219 MTRKQGCSPDIITYNTVIDGLCKSKRVDRAYKLFLQMLSDGLAPDDVTYSIVISSLCKWR 1278
Query: 391 NLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKN 450
+++ + + M NG P + T++D + K + D A+ + + S G PD +
Sbjct: 1279 FMDEANNVLELMLKNGFDPGAITYGTLIDGFCKTGNLDKALEILQLLLSKGSYPDVVTFS 1338
Query: 451 ILLSLAKTADERNEANELL 469
I + +A ELL
Sbjct: 1339 IFIDWLSKRGRLRQAGELL 1357
Score = 139 bits (349), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 86/322 (26%), Positives = 159/322 (49%), Gaps = 7/322 (2%)
Query: 171 IILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALM 230
+L + V+A+++ +A ++F + ++ + D + +I + +AG A +LF M
Sbjct: 131 CLLNVLVKAHQYSQAHDLFRSRIEGQWGG---DTVTYSTLISGFIRAGKILPAYELFDEM 187
Query: 231 AERGVQQSTVTYNSLMSFETNYKEVSKI---YDQMQRAGLQPDVVSYALLINAYGKARRE 287
+G++ + S++ + + S + +M + PD V+Y +IN K+ R
Sbjct: 188 NRKGLKAHAGVHKSILRGLCDAGQCSDAVLHFREMSKT-CPPDSVTYNTMINGLSKSDRL 246
Query: 288 EEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTM 347
++A+ + EEM+D G P +YN +L F + V+ A + + M C PD+ SYTT+
Sbjct: 247 DDAIRLLEEMVDNGFAPNVFSYNTVLHGFCKANRVENALWLLEQMVTRGCPPDVVSYTTV 306
Query: 348 LSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGI 407
++ ++ A + ++ Q G PNVITYGTL+ G+ +V +L+ +E+ KM G
Sbjct: 307 INGLCKLDQVDEACRVMDKMIQRGCQPNVITYGTLVDGFCRVGDLDGAVELVRKMTERGY 366
Query: 408 KPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANE 467
+PN + IM + + D + A + M G PPD + ++S A + EA++
Sbjct: 367 RPNAITYNNIMHVFCRRNDMERAHQVLQMMIQTGCPPDAINYSTIISGFCKAGKLREAHD 426
Query: 468 LLGNFNHPNNEPGINGLSISVD 489
LL P + LS +D
Sbjct: 427 LLEQMIRRGCRPDVACLSTLID 448
Score = 131 bits (330), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 78/321 (24%), Positives = 158/321 (49%), Gaps = 7/321 (2%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
L+ + K+ + +A ++LS M +KG P+VVS+ ++ + + + +M S+
Sbjct: 1094 LLDMFCKKDEVERACQLLSSMIQKGCVPNVVSYNTVIAGLCKATKVHEGVLLLEQMLSNN 1153
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
P +T+ I+ + + A E+F + ++S P+ ++ +++ K+ ++
Sbjct: 1154 CVPDIVTFNTIIDAMCKTYRVDIAYELFNLI---QESGCTPNLVTYNSLVHGLCKSRRFD 1210
Query: 222 KARKLFALMAER-GVQQSTVTYNSLMSFETNYKEVSKIYD---QMQRAGLQPDVVSYALL 277
+A L M + G +TYN+++ K V + Y QM GL PD V+Y+++
Sbjct: 1211 QAEYLLREMTRKQGCSPDIITYNTVIDGLCKSKRVDRAYKLFLQMLSDGLAPDDVTYSIV 1270
Query: 278 INAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRC 337
I++ K R +EA V E ML G P Y L+D F +G +D+A + + +
Sbjct: 1271 ISSLCKWRFMDEANNVLELMLKNGFDPGAITYGTLIDGFCKTGNLDKALEILQLLLSKGS 1330
Query: 338 SPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMME 397
PD+ +++ + + A + + + G VP+ +TY TL+KG+ + E ++
Sbjct: 1331 YPDVVTFSIFIDWLSKRGRLRQAGELLETMLRAGLVPDTVTYNTLLKGFCDASLTEDAVD 1390
Query: 398 IYDKMRVNGIKPNQTIFTTIM 418
+++ MR G +P+ +TT++
Sbjct: 1391 LFEVMRQCGCEPDNATYTTLV 1411
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 88/416 (21%), Positives = 179/416 (43%), Gaps = 7/416 (1%)
Query: 87 RIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGR 146
RI+ W + + + LI+ + + G A ++ MN+KG H +++ G+
Sbjct: 152 RIEGQWGGDTVTYSTLISGFIRAGKILPAYELFDEMNRKGLKAHAGVHKSILRGLCDAGQ 211
Query: 147 YKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKM 206
+A FR M + P P ++TY ++ ++++ +A + ++D + P+
Sbjct: 212 CSDAVLHFREMSKTCP-PDSVTYNTMINGLSKSDRLDDAIRLLEEMVD---NGFAPNVFS 267
Query: 207 FHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEV---SKIYDQMQ 263
++ +++ + KA E A L M RG V+Y ++++ +V ++ D+M
Sbjct: 268 YNTVLHGFCKANRVENALWLLEQMVTRGCPPDVVSYTTVINGLCKLDQVDEACRVMDKMI 327
Query: 264 RAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVD 323
+ G QP+V++Y L++ + + + A+ + +M + G RP YN ++ F ++
Sbjct: 328 QRGCQPNVITYGTLVDGFCRVGDLDGAVELVRKMTERGYRPNAITYNNIMHVFCRRNDME 387
Query: 324 QARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLI 383
+A V + M + C PD +Y+T++S + A + A ++ + G P+V TLI
Sbjct: 388 RAHQVLQMMIQTGCPPDAINYSTIISGFCKAGKLREAHDLLEQMIRRGCRPDVACLSTLI 447
Query: 384 KGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFP 443
K ++ E+ P+ ++ ++ A K K A W M
Sbjct: 448 DALCKAAAIDSAQELLRMSIGMDCAPDVVAYSILIHALCKAKRLPEAESWLDVMVKNRCY 507
Query: 444 PDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGINGLSISVDEEDDDDDDDE 499
PD N ++ + N+A L P + SI + D++ D
Sbjct: 508 PDVVTYNSVVDGLCKSRRINDAFLLFDRMRAAGVMPDVVTYSIVIHSFCKDNNLDS 563
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 84/351 (23%), Positives = 156/351 (44%), Gaps = 9/351 (2%)
Query: 123 NKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKF 182
+ GY + L+ + +Y A +FR +TY ++ F+ A K
Sbjct: 118 TRDGYQHEIFCCNCLLNVLVKAHQYSQAHDLFRSRIEGQWGGDTVTYSTLISGFIRAGKI 177
Query: 183 KEAEEVFMTLLDE-EKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVT 241
A E+F DE + LK + ++ AG A F M+ + +VT
Sbjct: 178 LPAYELF----DEMNRKGLKAHAGVHKSILRGLCDAGQCSDAVLHFREMS-KTCPPDSVT 232
Query: 242 YNSL---MSFETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEML 298
YN++ +S + ++ ++M G P+V SY +++ + KA R E AL + E+M+
Sbjct: 233 YNTMINGLSKSDRLDDAIRLLEEMVDNGFAPNVFSYNTVLHGFCKANRVENALWLLEQMV 292
Query: 299 DAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDME 358
G P +Y +++ VD+A V M + C P++ +Y T++ + D++
Sbjct: 293 TRGCPPDVVSYTTVINGLCKLDQVDEACRVMDKMIQRGCQPNVITYGTLVDGFCRVGDLD 352
Query: 359 GAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIM 418
GA + R++ + G+ PN ITY ++ + + N++E+ ++ M G P+ ++TI+
Sbjct: 353 GAVELVRKMTERGYRPNAITYNNIMHVFCRRNDMERAHQVLQMMIQTGCPPDAINYSTII 412
Query: 419 DAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELL 469
+ K A ++M G PD + L+ A + A ELL
Sbjct: 413 SGFCKAGKLREAHDLLEQMIRRGCRPDVACLSTLIDALCKAAAIDSAQELL 463
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 89/402 (22%), Positives = 179/402 (44%), Gaps = 22/402 (5%)
Query: 103 ITAYGKQGDFNKAEKVLSFMNKK---GYAPSVVSH------TALMEAYGRGGRYKNAEAI 153
+TA QG F+ K++ +N + YA + + T ++ +G R +A
Sbjct: 772 VTAVATQGGFH--HKIVRILNSRFAWEYAETALERFTGKLTTTVVGKVLQGVRNGDAALG 829
Query: 154 FRRMQSS--GPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMI 211
F +S G T +L+ + + K+A +V+ K P+ F ++I
Sbjct: 830 FFDWATSQEGYNHDTYTCNCLLQALLRLKRPKDALQVY-----RNKLCCSPNMFTFTILI 884
Query: 212 YMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVS---KIYDQMQRAG-L 267
+ +AG A +L M GV Q+ + +N ++ + +++ +++ +M+ +G
Sbjct: 885 HGLCRAGDIGTAYELLKEMPRHGVPQNVILHNVVIKGLCSARKLDSALELFKEMEESGSC 944
Query: 268 QPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQART 327
PDV +Y+ ++++ K+ + ++A + E+M+ G P Y+ LL +G +D+A
Sbjct: 945 PPDVFTYSTIVDSLVKSGKVDDACRLVEDMVSKGCSPNVVTYSSLLHGLCKAGKLDEATA 1004
Query: 328 VFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYA 387
+ + M R CSP+I +Y T++ + ++ A + G PNV+TY L+ +
Sbjct: 1005 LLQRMTRSGCSPNIVTYNTIIDGHCKLGRIDEAYHLLEEMVDGGCQPNVVTYTVLLDAFC 1064
Query: 388 KVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQK 447
K E + + + M G PN + +++D + K + + A M G P+
Sbjct: 1065 KCGKAEDAIGLVEVMVEKGYVPNLFTYNSLLDMFCKKDEVERACQLLSSMIQKGCVPNVV 1124
Query: 448 AKNILLSLAKTADERNEANELLGNFNHPNNEPGINGLSISVD 489
+ N +++ A + +E LL N P I + +D
Sbjct: 1125 SYNTVIAGLCKATKVHEGVLLLEQMLSNNCVPDIVTFNTIID 1166
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 83/368 (22%), Positives = 167/368 (45%), Gaps = 30/368 (8%)
Query: 68 VRLKQLKKWNVVSE---VLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNK 124
+ + L KW + E VLE L +++ +D + + LI + K G+ +KA ++L +
Sbjct: 1269 IVISSLCKWRFMDEANNVLE-LMLKNGFDPGAITYGTLIDGFCKTGNLDKALEILQLLLS 1327
Query: 125 KGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKE 184
KG P VV+ + ++ + GR + A + M +G P +TY +LK F +A+ ++
Sbjct: 1328 KGSYPDVVTFSIFIDWLSKRGRLRQAGELLETMLRAGLVPDTVTYNTLLKGFCDASLTED 1387
Query: 185 AEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNS 244
A ++F + + +PD + ++ Y+ L+AE V +S V
Sbjct: 1388 AVDLFEVM---RQCGCEPDNATYTTLVGHLVDKKSYKD------LLAE--VSKSMVD--- 1433
Query: 245 LMSFETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRP 304
F+ N++ SK+ ++ ++ DV +++ +GK ++A VFE M V
Sbjct: 1434 -TGFKLNHELSSKLEASIE---VEADVRLGCAIVDMFGKCGSPQDARKVFEGMDQRNV-- 1487
Query: 305 THKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFF 364
++ +L + +QA +++ M + PD ++ ++L+ +A ++ A F
Sbjct: 1488 --VLWSAMLGVYVFHKQEEQAFGLWRVMGLEGVEPDAVTFLSLLTMCCHAGLLDAAVDEF 1545
Query: 365 RRLKQD-GFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGK 423
+ +D G P V + +I ++ + E D M KP+ + ++ AY
Sbjct: 1546 VSISRDYGLEPGVDHFSCVIDLLGRLGLVN---EAEDLMLGMPCKPSAATWNCLLSAYKI 1602
Query: 424 NKDFDSAV 431
DF+ A+
Sbjct: 1603 CGDFERAL 1610
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 79/182 (43%), Gaps = 12/182 (6%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
++ +GK G A KV M+++ +VV +A++ Y + + A ++R M G
Sbjct: 1462 IVDMFGKCGSPQDARKVFEGMDQR----NVVLWSAMLGVYVFHKQEEQAFGLWRVMGLEG 1517
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
P A+T+ +L + A A + F+++ L+P F +I + + G
Sbjct: 1518 VEPDAVTFLSLLTMCCHAGLLDAAVDEFVSI--SRDYGLEPGVDHFSCVIDLLGRLGLVN 1575
Query: 222 KARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSKIYDQMQRAGLQPDVVSYALLINAY 281
+A L M + S T+N L+S YK ++ A L P SY LL N Y
Sbjct: 1576 EAEDLMLGMP---CKPSAATWNCLLS---AYKICGDFERALRVAELNPTQASYLLLSNMY 1629
Query: 282 GK 283
+
Sbjct: 1630 AQ 1631
>gi|218200911|gb|EEC83338.1| hypothetical protein OsI_28730 [Oryza sativa Indica Group]
gi|258644730|dbj|BAI39975.1| putative fertility restorer homologue [Oryza sativa Indica Group]
Length = 918
Score = 165 bits (418), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 98/347 (28%), Positives = 169/347 (48%), Gaps = 6/347 (1%)
Query: 103 ITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGP 162
I A G + A ++ M KG P+V ++TAL+ G K A +F RM G
Sbjct: 327 IIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGILKVAIGLFHRMSRDGV 386
Query: 163 RPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEK 222
P+ +TY ++ + VE + K A F+ L ++ P+ ++ MI Y G +K
Sbjct: 387 FPNTVTYNALINILVENRRIKYA---FVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKK 443
Query: 223 ARKLFALMAERGVQQSTVTYNSLMSFET---NYKEVSKIYDQMQRAGLQPDVVSYALLIN 279
A + M +RG + VTYN+++ N +I D M+ G +PD SY LI
Sbjct: 444 AMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELIC 503
Query: 280 AYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSP 339
+ K + E A +F EM+D G+ P Y L+D + +D A ++ + M+R C P
Sbjct: 504 GFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRP 563
Query: 340 DICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIY 399
++ +Y ++ ++ GAE+ + + ++G PNV+TY +I G K + +E++
Sbjct: 564 NVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMF 623
Query: 400 DKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQ 446
+KM G PN +++++ A G+ + A + E+E G PD+
Sbjct: 624 NKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDE 670
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 87/367 (23%), Positives = 171/367 (46%), Gaps = 16/367 (4%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + + +I A K G+ AE ++ + + +P ++T+++ + R +A +F
Sbjct: 214 NLLIYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVF 273
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEA-----EEVFMTLLDEEKSPLKPDQKMFHM 209
+M G P+ +TY ++ ++ + EA E + +L + P + M
Sbjct: 274 NQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDM 333
Query: 210 MIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMS---FETNYKEVSKIYDQMQRAG 266
G YE A +LF M +G + + TY +L+S K ++ +M R G
Sbjct: 334 --------GCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGILKVAIGLFHRMSRDG 385
Query: 267 LQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQAR 326
+ P+ V+Y LIN + RR + A V M G P YN ++ + I G +A
Sbjct: 386 VFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAM 445
Query: 327 TVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGY 386
V M + S ++ +Y T++ Y ++ + A + ++ G P+ +Y LI G+
Sbjct: 446 LVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGF 505
Query: 387 AKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQ 446
K++ +E ++++M +G+ PN+ +T ++D Y K++ D+A + M+ G P+
Sbjct: 506 CKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNV 565
Query: 447 KAKNILL 453
+ N+L+
Sbjct: 566 QTYNVLI 572
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 96/425 (22%), Positives = 176/425 (41%), Gaps = 41/425 (9%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
LI + + + L +++ G + +++AL+ R G + RM S G
Sbjct: 151 LIKSCHSKEAMARTMSFLDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEG 210
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
+P+ L Y ++ + +AE + + + E SP D + MI + + +
Sbjct: 211 VQPNLLIYNAVINALCKDGNVADAETIMKKVFESEMSP---DTFTYTSMILGHCRKHDLD 267
Query: 222 KARKLFALMAERGVQQSTVTYNSLM-----SFETN------------------------- 251
A ++F MA+ G + +TVTY++L+ S N
Sbjct: 268 SALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPI 327
Query: 252 --------YKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVR 303
Y++ +++ M+ G +P+V +Y LI+ + + A+ +F M GV
Sbjct: 328 IALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGILKVAIGLFHRMSRDGVF 387
Query: 304 PTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKF 363
P YN L++ + + A V M R+ CSP+I +Y M+ Y D + A
Sbjct: 388 PNTVTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLV 447
Query: 364 FRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGK 423
+ Q G N++TY T+IKGY N + I D MR G KP++ +T ++ + K
Sbjct: 448 MNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCK 507
Query: 424 NKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGING 483
+SA + EM G P++ L+ ++ + A LL + P +
Sbjct: 508 ISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQT 567
Query: 484 LSISV 488
++ +
Sbjct: 568 YNVLI 572
Score = 128 bits (321), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 111/471 (23%), Positives = 190/471 (40%), Gaps = 47/471 (9%)
Query: 19 FKDAADEAGKK----NWRRLMNQIEEVGSAVAVL-RSERTRGQPLPKDLVLGTLVRLKQL 73
F D ++G + + L+ + +G AV+ R R + + +L++ V
Sbjct: 167 FLDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLIYNAVINALC 226
Query: 74 KKWNVV-SEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVV 132
K NV +E + +S + + +I + ++ D + A +V + M K+G P+ V
Sbjct: 227 KDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCEPNTV 286
Query: 133 SHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTL 192
+++ L+ GR A + R M G P+A T + + +++A +F
Sbjct: 287 TYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWRLF--- 343
Query: 193 LDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNY 252
+D + +P+ + +I +G + A LF M+ GV +TVTYN+L++
Sbjct: 344 VDMKNKGCEPNVYTYTALISGLCVSGILKVAIGLFHRMSRDGVFPNTVTYNALINILVEN 403
Query: 253 KEVS---KIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAY 309
+ + + + M R G P++V+Y +I Y ++A+ V ML G Y
Sbjct: 404 RRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTY 463
Query: 310 NILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQ 369
N ++ + SG A + MR C PD SYT ++ + S ME A F +
Sbjct: 464 NTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVD 523
Query: 370 DGFVPN-----------------------------------VITYGTLIKGYAKVNNLEK 394
DG PN V TY LI G K NN
Sbjct: 524 DGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSG 583
Query: 395 MMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPD 445
E+ M GI PN +T ++D KN A+ + +M G P+
Sbjct: 584 AEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPN 634
Score = 125 bits (313), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 100/383 (26%), Positives = 177/383 (46%), Gaps = 24/383 (6%)
Query: 94 FNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAI 153
+NEM I Y GD KA V++ M ++G++ ++V++ +++ Y G +A I
Sbjct: 428 YNEM-----IKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRI 482
Query: 154 FRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYM 213
M+ G +P +Y ++ F + +K + A +F ++D+ L P++ + +I
Sbjct: 483 LDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDG---LCPNEVTYTALIDG 539
Query: 214 YKKAGGYEKARKLFALMAERGVQQSTVTYNSL---MSFETNYKEVSKIYDQMQRAGLQPD 270
Y K + A L M G + + TYN L ++ + N+ ++ M G+ P+
Sbjct: 540 YCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPN 599
Query: 271 VVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFK 330
VV+Y +I+ K AL +F +M++ G P Y+ L+ A G V++A +F
Sbjct: 600 VVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFA 659
Query: 331 CMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVN 390
+ R PD +Y M+ AY+ + +E A F R+ + G P + TYG LIKG
Sbjct: 660 ELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKGLKN-- 717
Query: 391 NLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYG-KNKDFDSAVVWYKEMESCGFPPDQKAK 449
E ++ + + PN + +G + D D+ V ++ + +
Sbjct: 718 --EYLLADQRLAALPDVVPNCS--------FGYQTTDQDAVSVMSAKLAELDPGLSVQVQ 767
Query: 450 NILLSLAKTADERNEANELLGNF 472
N L+S TA EANELLG+
Sbjct: 768 NALVSNLSTAGRWFEANELLGSM 790
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 92/376 (24%), Positives = 152/376 (40%), Gaps = 41/376 (10%)
Query: 74 KKWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVS 133
+K + + +LE ++ +S N + +LI KQ +F+ AE++ M ++G P+VV+
Sbjct: 544 EKLDTATSLLEHMK-RSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVT 602
Query: 134 HTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLL 193
+TA+++ + G A +F +M G P+ LTY +++ + K +EAE +F L
Sbjct: 603 YTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAEL- 661
Query: 194 DEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYK 253
E+ L PD+ + MI Y +G E A M + G Q + TY L+ N
Sbjct: 662 --ERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKGLKNEY 719
Query: 254 EVSKIYDQMQRAGLQPDVVSYA--------------------------------LLINAY 281
++ QR PDVV L++
Sbjct: 720 LLAD-----QRLAALPDVVPNCSFGYQTTDQDAVSVMSAKLAELDPGLSVQVQNALVSNL 774
Query: 282 GKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDI 341
A R EA + M+ G+ P +AYN LL + VD A VFK M C +
Sbjct: 775 STAGRWFEANELLGSMISQGLCPDQEAYNSLLCSLLRVRNVDLAMGVFKHMSTQGCEVHL 834
Query: 342 CSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDK 401
Y ++ A + A F + + P+ + LI G + + ME
Sbjct: 835 NGYKELICALCQLHRRKEARITFENMLMRTWNPDDVVQAVLIDGLLRDGYKDLCMEFLHI 894
Query: 402 MRVNGIKPNQTIFTTI 417
M P+ I+T +
Sbjct: 895 METRRYMPSFHIYTIL 910
>gi|302769173|ref|XP_002968006.1| hypothetical protein SELMODRAFT_88008 [Selaginella moellendorffii]
gi|300164744|gb|EFJ31353.1| hypothetical protein SELMODRAFT_88008 [Selaginella moellendorffii]
Length = 737
Score = 165 bits (418), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 104/406 (25%), Positives = 189/406 (46%), Gaps = 41/406 (10%)
Query: 101 MLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSS 160
+LI Y KQ K+L M K G P+ +++ LM++ + G+Y +A + + M
Sbjct: 311 ILIDGYCKQERPQDGAKLLQEMVKYGCEPNFITYNTLMDSLVKSGKYIDAFNLAQMMLRR 370
Query: 161 GPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGY 220
+PS T+ +++ +F + + A E+F + D PD +++MI +A
Sbjct: 371 DCKPSHFTFNLMIDMFCKVGQLDLAYELFQLMTDRG---CLPDIYTYNIMISGACRANRI 427
Query: 221 EKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSKIYD-------------------- 260
+ AR+L M E G VTYNS++S +V + Y+
Sbjct: 428 DDARQLLERMTEAGCPPDVVTYNSIVSGLCKASQVDEAYEVYEVLRNGGYFLDVVTCSTL 487
Query: 261 ------------------QMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGV 302
+M+R G PDVV+Y +LI+ + KA + +++LA F EMLD G
Sbjct: 488 IDGLCKSRRLDDAEKLLREMERNGSAPDVVAYTILIHGFCKADQLDKSLAFFSEMLDKGC 547
Query: 303 RPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEK 362
PT Y+I++D S V + K M +PD YT+++ + + A +
Sbjct: 548 VPTVITYSIVIDKLCKSARVRDGCMLLKTMLERGVTPDAIVYTSVIDGLCKSDSYDEAYE 607
Query: 363 FFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYG 422
++ +KQ G P V+TY L+ KV+ L++ + + + M +G P+ + ++ D +
Sbjct: 608 LYKLMKQTGCAPTVVTYNVLVDKLCKVSRLDEAIHLLEVMESDGCLPDTVTYNSVFDGFW 667
Query: 423 KNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANEL 468
K+ + D A ++ M+S G P ++LL+ ++ ++A E+
Sbjct: 668 KSAEHDKAFRLFQAMKSRGCSPTPFMYSLLLTKLVAEEKMDQAMEI 713
Score = 161 bits (408), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 98/385 (25%), Positives = 184/385 (47%), Gaps = 6/385 (1%)
Query: 88 IQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRY 147
I++ N + + LI + K G+ ++A + + M + +P V ++ L++ Y + R
Sbjct: 263 IEAGCAPNVVTYNTLINGFCKLGNMDEAVVLFNQMLENSCSPDVFTYNILIDGYCKQERP 322
Query: 148 KNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMF 207
++ + + M G P+ +TY ++ V++ K+ +A + +L + KP F
Sbjct: 323 QDGAKLLQEMVKYGCEPNFITYNTLMDSLVKSGKYIDAFNLAQMMLRRD---CKPSHFTF 379
Query: 208 HMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVS---KIYDQMQR 264
++MI M+ K G + A +LF LM +RG TYN ++S + ++ ++M
Sbjct: 380 NLMIDMFCKVGQLDLAYELFQLMTDRGCLPDIYTYNIMISGACRANRIDDARQLLERMTE 439
Query: 265 AGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQ 324
AG PDVV+Y +++ KA + +EA V+E + + G + L+D S +D
Sbjct: 440 AGCPPDVVTYNSIVSGLCKASQVDEAYEVYEVLRNGGYFLDVVTCSTLIDGLCKSRRLDD 499
Query: 325 ARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIK 384
A + + M R+ +PD+ +YT ++ + A ++ + FF + G VP VITY +I
Sbjct: 500 AEKLLREMERNGSAPDVVAYTILIHGFCKADQLDKSLAFFSEMLDKGCVPTVITYSIVID 559
Query: 385 GYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPP 444
K + + M G+ P+ ++T+++D K+ +D A YK M+ G P
Sbjct: 560 KLCKSARVRDGCMLLKTMLERGVTPDAIVYTSVIDGLCKSDSYDEAYELYKLMKQTGCAP 619
Query: 445 DQKAKNILLSLAKTADERNEANELL 469
N+L+ +EA LL
Sbjct: 620 TVVTYNVLVDKLCKVSRLDEAIHLL 644
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 99/399 (24%), Positives = 195/399 (48%), Gaps = 7/399 (1%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
+ + + LI + K DF +A ++L M K+G P + +++ GR +A +
Sbjct: 166 DSITYSTLINGFCKARDFQQAYRLLDEMEKRGIVPHNAVYNTIIKGLCDNGRVDSALVHY 225
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
R MQ + PS +TY I++ ++ + +A + L D ++ P+ ++ +I +
Sbjct: 226 RDMQRNCA-PSVITYTILVDALCKSARISDAS---LILEDMIEAGCAPNVVTYNTLINGF 281
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSLM---SFETNYKEVSKIYDQMQRAGLQPDV 271
K G ++A LF M E TYN L+ + ++ +K+ +M + G +P+
Sbjct: 282 CKLGNMDEAVVLFNQMLENSCSPDVFTYNILIDGYCKQERPQDGAKLLQEMVKYGCEPNF 341
Query: 272 VSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKC 331
++Y L+++ K+ + +A + + ML +P+H +N+++D F G +D A +F+
Sbjct: 342 ITYNTLMDSLVKSGKYIDAFNLAQMMLRRDCKPSHFTFNLMIDMFCKVGQLDLAYELFQL 401
Query: 332 MRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNN 391
M C PDI +Y M+S A+ ++ A + R+ + G P+V+TY +++ G K +
Sbjct: 402 MTDRGCLPDIYTYNIMISGACRANRIDDARQLLERMTEAGCPPDVVTYNSIVSGLCKASQ 461
Query: 392 LEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNI 451
+++ E+Y+ +R G + +T++D K++ D A +EME G PD A I
Sbjct: 462 VDEAYEVYEVLRNGGYFLDVVTCSTLIDGLCKSRRLDDAEKLLREMERNGSAPDVVAYTI 521
Query: 452 LLSLAKTADERNEANELLGNFNHPNNEPGINGLSISVDE 490
L+ AD+ +++ P + SI +D+
Sbjct: 522 LIHGFCKADQLDKSLAFFSEMLDKGCVPTVITYSIVIDK 560
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 94/436 (21%), Positives = 197/436 (45%), Gaps = 7/436 (1%)
Query: 58 LPKDLVLGTLVRLKQLKKWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEK 117
+P + V T+++ V S ++ + +Q + + + +L+ A K + A
Sbjct: 199 VPHNAVYNTIIK-GLCDNGRVDSALVHYRDMQRNCAPSVITYTILVDALCKSARISDASL 257
Query: 118 VLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFV 177
+L M + G AP+VV++ L+ + + G A +F +M + P TY I++ +
Sbjct: 258 ILEDMIEAGCAPNVVTYNTLINGFCKLGNMDEAVVLFNQMLENSCSPDVFTYNILIDGYC 317
Query: 178 EANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQ 237
+ + ++ ++ ++ K +P+ ++ ++ K+G Y A L +M R +
Sbjct: 318 KQERPQDGAKLLQEMV---KYGCEPNFITYNTLMDSLVKSGKYIDAFNLAQMMLRRDCKP 374
Query: 238 STVTYNSLMSFETNYKEVSKIYDQMQRA---GLQPDVVSYALLINAYGKARREEEALAVF 294
S T+N ++ ++ Y+ Q G PD+ +Y ++I+ +A R ++A +
Sbjct: 375 SHFTFNLMIDMFCKVGQLDLAYELFQLMTDRGCLPDIYTYNIMISGACRANRIDDARQLL 434
Query: 295 EEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNA 354
E M +AG P YN ++ + VD+A V++ +R D+ + +T++ +
Sbjct: 435 ERMTEAGCPPDVVTYNSIVSGLCKASQVDEAYEVYEVLRNGGYFLDVVTCSTLIDGLCKS 494
Query: 355 SDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIF 414
++ AEK R ++++G P+V+ Y LI G+ K + L+K + + +M G P +
Sbjct: 495 RRLDDAEKLLREMERNGSAPDVVAYTILIHGFCKADQLDKSLAFFSEMLDKGCVPTVITY 554
Query: 415 TTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNH 474
+ ++D K+ + K M G PD ++ +D +EA EL
Sbjct: 555 SIVIDKLCKSARVRDGCMLLKTMLERGVTPDAIVYTSVIDGLCKSDSYDEAYELYKLMKQ 614
Query: 475 PNNEPGINGLSISVDE 490
P + ++ VD+
Sbjct: 615 TGCAPTVVTYNVLVDK 630
Score = 118 bits (296), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 76/265 (28%), Positives = 133/265 (50%), Gaps = 9/265 (3%)
Query: 221 EKARKLFA-LMAERGVQQSTVTYNSLMSFETNYKEVSKIYDQMQ--RAGL-QPDVVSYAL 276
+KA K F + G + S T N L+S K+ + YD + R GL PD ++Y+
Sbjct: 113 DKAVKFFDWCTGQPGYKHSKFTCNCLLSAFVRKKKAQEAYDLFKNHRCGLCSPDSITYST 172
Query: 277 LINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDR 336
LIN + KAR ++A + +EM G+ P + YN ++ +G VD A ++ M+R+
Sbjct: 173 LINGFCKARDFQQAYRLLDEMEKRGIVPHNAVYNTIIKGLCDNGRVDSALVHYRDMQRN- 231
Query: 337 CSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMM 396
C+P + +YT ++ A ++ + A + + G PNV+TY TLI G+ K+ N+++ +
Sbjct: 232 CAPSVITYTILVDALCKSARISDASLILEDMIEAGCAPNVVTYNTLINGFCKLGNMDEAV 291
Query: 397 EIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILL-SL 455
++++M N P+ + ++D Y K + +EM G P+ N L+ SL
Sbjct: 292 VLFNQMLENSCSPDVFTYNILIDGYCKQERPQDGAKLLQEMVKYGCEPNFITYNTLMDSL 351
Query: 456 AKTA---DERNEANELLGNFNHPNN 477
K+ D N A +L P++
Sbjct: 352 VKSGKYIDAFNLAQMMLRRDCKPSH 376
Score = 116 bits (290), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 73/342 (21%), Positives = 149/342 (43%), Gaps = 35/342 (10%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
+ F ++I + K G + A ++ M +G P + ++ ++ R R +A +
Sbjct: 375 SHFTFNLMIDMFCKVGQLDLAYELFQLMTDRGCLPDIYTYNIMISGACRANRIDDARQLL 434
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTL---------------------- 192
RM +G P +TY I+ +A++ EA EV+ L
Sbjct: 435 ERMTEAGCPPDVVTYNSIVSGLCKASQVDEAYEVYEVLRNGGYFLDVVTCSTLIDGLCKS 494
Query: 193 --LDEEKSPLK--------PDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTY 242
LD+ + L+ PD + ++I+ + KA +K+ F+ M ++G + +TY
Sbjct: 495 RRLDDAEKLLREMERNGSAPDVVAYTILIHGFCKADQLDKSLAFFSEMLDKGCVPTVITY 554
Query: 243 NSL---MSFETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLD 299
+ + + ++ + M G+ PD + Y +I+ K+ +EA +++ M
Sbjct: 555 SIVIDKLCKSARVRDGCMLLKTMLERGVTPDAIVYTSVIDGLCKSDSYDEAYELYKLMKQ 614
Query: 300 AGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEG 359
G PT YN+L+D +D+A + + M D C PD +Y ++ + +++ +
Sbjct: 615 TGCAPTVVTYNVLVDKLCKVSRLDEAIHLLEVMESDGCLPDTVTYNSVFDGFWKSAEHDK 674
Query: 360 AEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDK 401
A + F+ +K G P Y L+ +++ MEI+++
Sbjct: 675 AFRLFQAMKSRGCSPTPFMYSLLLTKLVAEEKMDQAMEIWEE 716
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/189 (24%), Positives = 84/189 (44%), Gaps = 1/189 (0%)
Query: 301 GVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGA 360
G + + N LL AF +A +FK R CSPD +Y+T+++ + A D + A
Sbjct: 127 GYKHSKFTCNCLLSAFVRKKKAQEAYDLFKNHRCGLCSPDSITYSTLINGFCKARDFQQA 186
Query: 361 EKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDA 420
+ +++ G VP+ Y T+IKG ++ + Y M+ N P+ +T ++DA
Sbjct: 187 YRLLDEMEKRGIVPHNAVYNTIIKGLCDNGRVDSALVHYRDMQRN-CAPSVITYTILVDA 245
Query: 421 YGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPG 480
K+ A + ++M G P+ N L++ +EA L + P
Sbjct: 246 LCKSARISDASLILEDMIEAGCAPNVVTYNTLINGFCKLGNMDEAVVLFNQMLENSCSPD 305
Query: 481 INGLSISVD 489
+ +I +D
Sbjct: 306 VFTYNILID 314
>gi|302803484|ref|XP_002983495.1| hypothetical protein SELMODRAFT_118272 [Selaginella moellendorffii]
gi|300148738|gb|EFJ15396.1| hypothetical protein SELMODRAFT_118272 [Selaginella moellendorffii]
Length = 561
Score = 165 bits (418), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 108/408 (26%), Positives = 196/408 (48%), Gaps = 20/408 (4%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
NE + LI K G ++A ++L M +G P V H ++ + GR+ +A F
Sbjct: 29 NEFTYGSLIHGLCKAGKLDQAYELLDEMRDRGIPPGVAVHNGVIRGLCKAGRFGDALGYF 88
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
+ + + P +T+ I++ V++ + +EA ++F ++ S P+ + +I
Sbjct: 89 KTVAGTKCTPDIITFNILVDALVKSGRVEEAFQIFESM--HTSSQCLPNVVTYTTVINGL 146
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSK---IYDQMQRAGLQPDV 271
K G ++A +L LM E G + +TY+ L+ K + +M R G QPDV
Sbjct: 147 CKDGKLDRAIELLDLMNETGCCPNVITYSVLVEGLCKAGRTDKGFTLLQEMTRRGFQPDV 206
Query: 272 VSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKC 331
+ Y L+N K+RR +EAL + + M+ +G PT YN L++ F S VD+A + +
Sbjct: 207 IMYNTLLNGLCKSRRLDEALELVQLMIRSGCYPTVVTYNSLMELFCRSKQVDRAFRLIQV 266
Query: 332 MRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAK--- 388
M C PD+ +Y T+++ + ++ A+ +++ VP+VITY T+I G K
Sbjct: 267 MSERGCPPDVINYNTVIAGLCRDARLDDAQALLKQMVAARCVPDVITYSTIIDGLCKDWR 326
Query: 389 VN---NLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPD 445
V+ LE EI + M+ G PN + +++ + + A+ + M PD
Sbjct: 327 VDADWKLEAACEILEMMKQTGCPPNAGTYAVVIEGLCRARKSQQALALLRRMIDSEVVPD 386
Query: 446 QKAKNILL-SLAKTADERNEANELLGNFNHPNNEPG-------INGLS 485
+ ++++ SL K+ D + A ++ G + +P I+GLS
Sbjct: 387 LSSFSMVIGSLCKSHD-LDAAYKIFGMMSERECKPNPVAYAALIDGLS 433
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 85/437 (19%), Positives = 194/437 (44%), Gaps = 52/437 (11%)
Query: 81 EVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEA 140
++ E + S N + + +I K G ++A ++L MN+ G P+V++++ L+E
Sbjct: 121 QIFESMHTSSQCLPNVVTYTTVINGLCKDGKLDRAIELLDLMNETGCCPNVITYSVLVEG 180
Query: 141 YGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPL 200
+ GR + + M G +P + Y +L ++ + EA E+ ++ +S
Sbjct: 181 LCKAGRTDKGFTLLQEMTRRGFQPDVIMYNTLLNGLCKSRRLDEALELVQLMI---RSGC 237
Query: 201 KPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMS------------- 247
P ++ ++ ++ ++ ++A +L +M+ERG + YN++++
Sbjct: 238 YPTVVTYNSLMELFCRSKQVDRAFRLIQVMSERGCPPDVINYNTVIAGLCRDARLDDAQA 297
Query: 248 -----------------------------FETNYK--EVSKIYDQMQRAGLQPDVVSYAL 276
+ ++K +I + M++ G P+ +YA+
Sbjct: 298 LLKQMVAARCVPDVITYSTIIDGLCKDWRVDADWKLEAACEILEMMKQTGCPPNAGTYAV 357
Query: 277 LINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDR 336
+I +AR+ ++ALA+ M+D+ V P ++++++ + S +D A +F M
Sbjct: 358 VIEGLCRARKSQQALALLRRMIDSEVVPDLSSFSMVIGSLCKSHDLDAAYKIFGMMSERE 417
Query: 337 CSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMM 396
C P+ +Y ++ +++ A + F L + F P V TY +++ G V +E+ +
Sbjct: 418 CKPNPVAYAALIDGLSKGGEVDKAVRVF-ELMVESFRPGVATYNSVLDGLCGVGRIEEAV 476
Query: 397 EIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLS-L 455
+ + M P+ + ++ + + A ++ +E+ GF + N+L++ L
Sbjct: 477 RMVEGMIHKECFPDGASYGALIRGLCRVSCVEEAYELFQAVEAKGFAMEVGVYNVLVNEL 536
Query: 456 AK---TADERNEANELL 469
K +D AN+L+
Sbjct: 537 CKKKRLSDAHGVANKLI 553
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 75/332 (22%), Positives = 145/332 (43%), Gaps = 10/332 (3%)
Query: 173 LKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAE 232
L L V A + +A ++F EE+ P++ + +I+ KAG ++A +L M +
Sbjct: 5 LNLLVRAGQHGQAVQLF----REERC--VPNEFTYGSLIHGLCKAGKLDQAYELLDEMRD 58
Query: 233 RGVQQSTVTYNSL---MSFETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEE 289
RG+ +N + + + + + + PD++++ +L++A K+ R EE
Sbjct: 59 RGIPPGVAVHNGVIRGLCKAGRFGDALGYFKTVAGTKCTPDIITFNILVDALVKSGRVEE 118
Query: 290 ALAVFEEM-LDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTML 348
A +FE M + P Y +++ G +D+A + M C P++ +Y+ ++
Sbjct: 119 AFQIFESMHTSSQCLPNVVTYTTVINGLCKDGKLDRAIELLDLMNETGCCPNVITYSVLV 178
Query: 349 SAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIK 408
A + + + + GF P+VI Y TL+ G K L++ +E+ M +G
Sbjct: 179 EGLCKAGRTDKGFTLLQEMTRRGFQPDVIMYNTLLNGLCKSRRLDEALELVQLMIRSGCY 238
Query: 409 PNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANEL 468
P + ++M+ + ++K D A + M G PPD N +++ ++A L
Sbjct: 239 PTVVTYNSLMELFCRSKQVDRAFRLIQVMSERGCPPDVINYNTVIAGLCRDARLDDAQAL 298
Query: 469 LGNFNHPNNEPGINGLSISVDEEDDDDDDDED 500
L P + S +D D D D
Sbjct: 299 LKQMVAARCVPDVITYSTIIDGLCKDWRVDAD 330
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 86/371 (23%), Positives = 166/371 (44%), Gaps = 15/371 (4%)
Query: 48 LRSERTRGQPLPKDLVLGTLVRLKQLKKWNVVSEVLEW--LRIQSWWDFNEMDFLMLITA 105
L E TR P ++ TL L L K + E LE L I+S + + L+
Sbjct: 193 LLQEMTRRGFQPDVIMYNTL--LNGLCKSRRLDEALELVQLMIRSGCYPTVVTYNSLMEL 250
Query: 106 YGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPS 165
+ + ++A +++ M+++G P V+++ ++ R R +A+A+ ++M ++ P
Sbjct: 251 FCRSKQVDRAFRLIQVMSERGCPPDVINYNTVIAGLCRDARLDDAQALLKQMVAARCVPD 310
Query: 166 ALTYQIILKLF-----VEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGY 220
+TY I+ V+A+ EA + ++ + P P+ + ++I +A
Sbjct: 311 VITYSTIIDGLCKDWRVDADWKLEAACEILEMMKQTGCP--PNAGTYAVVIEGLCRARKS 368
Query: 221 EKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVS---KIYDQMQRAGLQPDVVSYALL 277
++A L M + V +++ ++ ++ KI+ M +P+ V+YA L
Sbjct: 369 QQALALLRRMIDSEVVPDLSSFSMVIGSLCKSHDLDAAYKIFGMMSERECKPNPVAYAAL 428
Query: 278 INAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRC 337
I+ K ++A+ VFE M+++ RP YN +LD G +++A + + M C
Sbjct: 429 IDGLSKGGEVDKAVRVFELMVES-FRPGVATYNSVLDGLCGVGRIEEAVRMVEGMIHKEC 487
Query: 338 SPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMME 397
PD SY ++ S +E A + F+ ++ GF V Y L+ K L
Sbjct: 488 FPDGASYGALIRGLCRVSCVEEAYELFQAVEAKGFAMEVGVYNVLVNELCKKKRLSDAHG 547
Query: 398 IYDKMRVNGIK 408
+ +K+ G K
Sbjct: 548 VANKLIEAGYK 558
Score = 45.4 bits (106), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 37/182 (20%), Positives = 72/182 (39%), Gaps = 6/182 (3%)
Query: 310 NILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQ 369
N L+ +G QA +F R +RC P+ +Y +++ A ++ A + ++
Sbjct: 2 NCALNLLVRAGQHGQAVQLF---REERCVPNEFTYGSLIHGLCKAGKLDQAYELLDEMRD 58
Query: 370 DGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDS 429
G P V + +I+G K + + + P+ F ++DA K+ +
Sbjct: 59 RGIPPGVAVHNGVIRGLCKAGRFGDALGYFKTVAGTKCTPDIITFNILVDALVKSGRVEE 118
Query: 430 AVVWYKEMESCG--FPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGINGLSIS 487
A ++ M + P ++ L K + + A ELL N P + S+
Sbjct: 119 AFQIFESMHTSSQCLPNVVTYTTVINGLCKDG-KLDRAIELLDLMNETGCCPNVITYSVL 177
Query: 488 VD 489
V+
Sbjct: 178 VE 179
>gi|34015232|gb|AAQ56425.1| putative fertility restorer [Oryza sativa Japonica Group]
gi|34015270|gb|AAQ56462.1| putative fertility restorer [Oryza sativa Japonica Group]
Length = 1007
Score = 165 bits (417), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 98/347 (28%), Positives = 169/347 (48%), Gaps = 6/347 (1%)
Query: 103 ITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGP 162
I A G + A ++ M KG P+V ++TAL+ G K A +F RM G
Sbjct: 327 IIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGV 386
Query: 163 RPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEK 222
P+ +TY ++ + VE + K A F+ L ++ P+ ++ MI Y G +K
Sbjct: 387 FPNTVTYNALINILVENRRIKYA---FVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKK 443
Query: 223 ARKLFALMAERGVQQSTVTYNSLMSFET---NYKEVSKIYDQMQRAGLQPDVVSYALLIN 279
A + M +RG + VTYN+++ N +I D M+ G +PD SY LI
Sbjct: 444 AMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELIC 503
Query: 280 AYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSP 339
+ K + E A +F EM+D G+ P Y L+D + +D A ++ + M+R C P
Sbjct: 504 GFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRP 563
Query: 340 DICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIY 399
++ +Y ++ ++ GAE+ + + ++G PNV+TY +I G K + +E++
Sbjct: 564 NVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMF 623
Query: 400 DKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQ 446
+KM G PN +++++ A G+ + A + E+E G PD+
Sbjct: 624 NKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDE 670
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 87/367 (23%), Positives = 171/367 (46%), Gaps = 16/367 (4%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + + +I A K G+ AE ++ + + +P ++T+++ + R +A +F
Sbjct: 214 NLLIYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVF 273
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEA-----EEVFMTLLDEEKSPLKPDQKMFHM 209
+M G P+ +TY ++ ++ + EA E + +L + P + M
Sbjct: 274 NQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDM 333
Query: 210 MIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMS---FETNYKEVSKIYDQMQRAG 266
G YE A +LF M +G + + TY +L+S K ++ +M R G
Sbjct: 334 --------GCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDG 385
Query: 267 LQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQAR 326
+ P+ V+Y LIN + RR + A V M G P YN ++ + I G +A
Sbjct: 386 VFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAM 445
Query: 327 TVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGY 386
V M + S ++ +Y T++ Y ++ + A + ++ G P+ +Y LI G+
Sbjct: 446 LVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGF 505
Query: 387 AKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQ 446
K++ +E ++++M +G+ PN+ +T ++D Y K++ D+A + M+ G P+
Sbjct: 506 CKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNV 565
Query: 447 KAKNILL 453
+ N+L+
Sbjct: 566 QTYNVLI 572
Score = 128 bits (322), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 96/425 (22%), Positives = 176/425 (41%), Gaps = 41/425 (9%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
LI + + + L +++ G + +++AL+ R G + RM S G
Sbjct: 151 LIKSCHSKEAMARTMSFLDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEG 210
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
+P+ L Y ++ + +AE + + + E SP D + MI + + +
Sbjct: 211 VQPNLLIYNAVINALCKDGNVADAETIMKKVFESEMSP---DTFTYTSMILGHCRKHDLD 267
Query: 222 KARKLFALMAERGVQQSTVTYNSLM-----SFETN------------------------- 251
A ++F MA+ G + +TVTY++L+ S N
Sbjct: 268 SALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPI 327
Query: 252 --------YKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVR 303
Y++ +++ M+ G +P+V +Y LI+ + + A+ +F M GV
Sbjct: 328 IALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVF 387
Query: 304 PTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKF 363
P YN L++ + + A V M R+ CSP+I +Y M+ Y D + A
Sbjct: 388 PNTVTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLV 447
Query: 364 FRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGK 423
+ Q G N++TY T+IKGY N + I D MR G KP++ +T ++ + K
Sbjct: 448 MNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCK 507
Query: 424 NKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGING 483
+SA + EM G P++ L+ ++ + A LL + P +
Sbjct: 508 ISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQT 567
Query: 484 LSISV 488
++ +
Sbjct: 568 YNVLI 572
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 111/471 (23%), Positives = 190/471 (40%), Gaps = 47/471 (9%)
Query: 19 FKDAADEAGKK----NWRRLMNQIEEVGSAVAVL-RSERTRGQPLPKDLVLGTLVRLKQL 73
F D ++G + + L+ + +G AV+ R R + + +L++ V
Sbjct: 167 FLDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLIYNAVINALC 226
Query: 74 KKWNVV-SEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVV 132
K NV +E + +S + + +I + ++ D + A +V + M K+G P+ V
Sbjct: 227 KDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCEPNTV 286
Query: 133 SHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTL 192
+++ L+ GR A + R M G P+A T + + +++A +F
Sbjct: 287 TYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWRLF--- 343
Query: 193 LDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNY 252
+D + +P+ + +I +G + A LF M+ GV +TVTYN+L++
Sbjct: 344 VDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALINILVEN 403
Query: 253 KEVS---KIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAY 309
+ + + + M R G P++V+Y +I Y ++A+ V ML G Y
Sbjct: 404 RRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTY 463
Query: 310 NILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQ 369
N ++ + SG A + MR C PD SYT ++ + S ME A F +
Sbjct: 464 NTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVD 523
Query: 370 DGFVPN-----------------------------------VITYGTLIKGYAKVNNLEK 394
DG PN V TY LI G K NN
Sbjct: 524 DGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSG 583
Query: 395 MMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPD 445
E+ M GI PN +T ++D KN A+ + +M G P+
Sbjct: 584 AEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPN 634
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 100/383 (26%), Positives = 177/383 (46%), Gaps = 24/383 (6%)
Query: 94 FNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAI 153
+NEM I Y GD KA V++ M ++G++ ++V++ +++ Y G +A I
Sbjct: 428 YNEM-----IKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRI 482
Query: 154 FRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYM 213
M+ G +P +Y ++ F + +K + A +F ++D+ L P++ + +I
Sbjct: 483 LDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDG---LCPNEVTYTALIDG 539
Query: 214 YKKAGGYEKARKLFALMAERGVQQSTVTYNSL---MSFETNYKEVSKIYDQMQRAGLQPD 270
Y K + A L M G + + TYN L ++ + N+ ++ M G+ P+
Sbjct: 540 YCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPN 599
Query: 271 VVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFK 330
VV+Y +I+ K AL +F +M++ G P Y+ L+ A G V++A +F
Sbjct: 600 VVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFA 659
Query: 331 CMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVN 390
+ R PD +Y M+ AY+ + +E A F R+ + G P + TYG LIKG
Sbjct: 660 ELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKGLKN-- 717
Query: 391 NLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYG-KNKDFDSAVVWYKEMESCGFPPDQKAK 449
E ++ + + PN + +G + D D+ V ++ + +
Sbjct: 718 --EYLLADQRLAALPDVVPNCS--------FGYQTTDQDAVSVMSAKLAELDPGLSVQVQ 767
Query: 450 NILLSLAKTADERNEANELLGNF 472
N L+S TA EANELLG+
Sbjct: 768 NALVSNLSTAGRWFEANELLGSM 790
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 93/386 (24%), Positives = 155/386 (40%), Gaps = 41/386 (10%)
Query: 74 KKWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVS 133
+K + + +LE ++ +S N + +LI KQ +F+ AE++ M ++G P+VV+
Sbjct: 544 EKLDTATSLLEHMK-RSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVT 602
Query: 134 HTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLL 193
+TA+++ + G A +F +M G P+ LTY +++ + K +EAE +F L
Sbjct: 603 YTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAEL- 661
Query: 194 DEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYK 253
E+ L PD+ + MI Y +G E A M + G Q + TY L+ N
Sbjct: 662 --ERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKGLKNEY 719
Query: 254 EVSKIYDQMQRAGLQPDVVSYA--------------------------------LLINAY 281
++ QR PDVV L++
Sbjct: 720 LLAD-----QRLAALPDVVPNCSFGYQTTDQDAVSVMSAKLAELDPGLSVQVQNALVSNL 774
Query: 282 GKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDI 341
A R EA + M+ G+ P +AYN LL + VD A VFK M C +
Sbjct: 775 STAGRWFEANELLGSMISQGLCPDQEAYNSLLCSLLRVRNVDLAMGVFKHMSTQGCEVHL 834
Query: 342 CSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDK 401
Y ++ A + A F + + P+ + LI G + + ME
Sbjct: 835 NGYKELICALCQLHRRKEARITFENMLMRTWNPDDVVQAVLIDGLLRDGYKDLCMEFLHI 894
Query: 402 MRVNGIKPNQTIFTTIMDAYGKNKDF 427
M P+ I+T + K + +
Sbjct: 895 METRRYMPSFHIYTILAREASKKRSW 920
>gi|297826989|ref|XP_002881377.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297327216|gb|EFH57636.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 589
Score = 165 bits (417), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 114/436 (26%), Positives = 208/436 (47%), Gaps = 30/436 (6%)
Query: 61 DLVLGTLVRLKQLKKWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLS 120
D ++ V+L+ KKW+ + V EW+ +S + + + F +LI AYG++ F +AE +
Sbjct: 133 DDLINVSVQLRLNKKWDSIILVCEWILRRSSFQPDVICFNLLIDAYGQKFRFKEAESLYV 192
Query: 121 FMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILK-LFVEA 179
+ + P+ ++T L++AY G + AEA+ MQ+ PS Y ++ L
Sbjct: 193 QLLESRCVPTEDTYTLLIKAYCMAGLIEKAEAVLIEMQNHHVSPSVTVYNAYIEGLMKRK 252
Query: 180 NKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQST 239
++A +VF + ++ KP + +++MI +Y KA + KLF M + +
Sbjct: 253 GNTEQAIDVFQRM---KRDRCKPTTETYNLMINLYGKASKSYMSWKLFCEMRSHQCKPNI 309
Query: 240 VTYNSLMS--------------FETNYKE------------VSKIYDQMQRAGLQPDVVS 273
TY +L++ FE ++ ++I+ MQ G +PD S
Sbjct: 310 CTYTALVNAFAREGLCEKAEEIFEQLQEDGHIDSRAGYPYGAAEIFSLMQHMGCEPDRAS 369
Query: 274 YALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMR 333
Y ++++AYG+A +A AVFEEM G+ PT K++ +LL A++ + V + + K M
Sbjct: 370 YNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSRARDVTKCEAIVKEMS 429
Query: 334 RDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLE 393
+ PD +ML+ Y EK ++ ++ TY LI Y K LE
Sbjct: 430 ENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEMENGPCTADISTYNILINIYGKAGFLE 489
Query: 394 KMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILL 453
++ E++ +++ KP+ +T+ + AY + K + + ++EM G PD +LL
Sbjct: 490 RIEELFVELKERNFKPDVVTWTSRIGAYSRKKLYVKCLEIFEEMIDSGCAPDGGTAKVLL 549
Query: 454 SLAKTADERNEANELL 469
S + D+ + +L
Sbjct: 550 SACSSEDQVEQVTSVL 565
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 92/359 (25%), Positives = 161/359 (44%), Gaps = 33/359 (9%)
Query: 150 AEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHM 209
E I RR S +P + + +++ + + +FKEAE +++ LL+ S P + + +
Sbjct: 155 CEWILRR---SSFQPDVICFNLLIDAYGQKFRFKEAESLYVQLLE---SRCVPTEDTYTL 208
Query: 210 MIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNS----LMSFETNYKEVSKIYDQMQRA 265
+I Y AG EKA + M V S YN+ LM + N ++ ++ +M+R
Sbjct: 209 LIKAYCMAGLIEKAEAVLIEMQNHHVSPSVTVYNAYIEGLMKRKGNTEQAIDVFQRMKRD 268
Query: 266 GLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQA 325
+P +Y L+IN YGKA + + +F EM +P Y L++AFA G+ ++A
Sbjct: 269 RCKPTTETYNLMINLYGKASKSYMSWKLFCEMRSHQCKPNICTYTALVNAFAREGLCEKA 328
Query: 326 RTVFKCMRRDR-----------------------CSPDICSYTTMLSAYVNASDMEGAEK 362
+F+ ++ D C PD SY M+ AY A AE
Sbjct: 329 EEIFEQLQEDGHIDSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEA 388
Query: 363 FFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYG 422
F +K+ G P + ++ L+ Y++ ++ K I +M NG++P+ + ++++ YG
Sbjct: 389 VFEEMKRLGIAPTMKSHMLLLSAYSRARDVTKCEAIVKEMSENGVEPDTFVLNSMLNLYG 448
Query: 423 KNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGI 481
+ F EME+ D NIL+++ A EL N +P +
Sbjct: 449 RLGQFTKMEKILAEMENGPCTADISTYNILINIYGKAGFLERIEELFVELKERNFKPDV 507
Score = 101 bits (252), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 65/234 (27%), Positives = 106/234 (45%), Gaps = 35/234 (14%)
Query: 101 MLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSS 160
+++ AYG+ G + AE V M + G AP++ SH L+ AY R EAI + M +
Sbjct: 372 IMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSRARDVTKCEAIVKEMSEN 431
Query: 161 GPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGY 220
G P +L L+ +F + E++ L + E P D ++++I +Y KAG
Sbjct: 432 GVEPDTFVLNSMLNLYGRLGQFTKMEKI---LAEMENGPCTADISTYNILINIYGKAGFL 488
Query: 221 EKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSKIYDQMQRAGLQPDVVSYALLINA 280
E+ +LF + ER N+K PDVV++ I A
Sbjct: 489 ERIEELFVELKER-----------------NFK---------------PDVVTWTSRIGA 516
Query: 281 YGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRR 334
Y + + + L +FEEM+D+G P +LL A + V+Q +V + M +
Sbjct: 517 YSRKKLYVKCLEIFEEMIDSGCAPDGGTAKVLLSACSSEDQVEQVTSVLRTMHK 570
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 69/317 (21%), Positives = 140/317 (44%), Gaps = 22/317 (6%)
Query: 101 MLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSS 160
++I YGK + K+ M P++ ++TAL+ A+ R G + AE IF ++Q
Sbjct: 279 LMINLYGKASKSYMSWKLFCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQLQED 338
Query: 161 GPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGY 220
G S Y A E+F + + +PD+ +++M+ Y +AG +
Sbjct: 339 GHIDSRAGYPY------------GAAEIFSLM---QHMGCEPDRASYNIMVDAYGRAGLH 383
Query: 221 EKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSK---IYDQMQRAGLQPDVVSYALL 277
A +F M G+ + ++ L+S + ++V+K I +M G++PD +
Sbjct: 384 SDAEAVFEEMKRLGIAPTMKSHMLLLSAYSRARDVTKCEAIVKEMSENGVEPDTFVLNSM 443
Query: 278 INAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRC 337
+N YG+ + + + EM + YNIL++ + +G +++ +F ++
Sbjct: 444 LNLYGRLGQFTKMEKILAEMENGPCTADISTYNILINIYGKAGFLERIEELFVELKERNF 503
Query: 338 SPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMME 397
PD+ ++T+ + AY + F + G P+ T L+ + + +E++
Sbjct: 504 KPDVVTWTSRIGAYSRKKLYVKCLEIFEEMIDSGCAPDGGTAKVLLSACSSEDQVEQVTS 563
Query: 398 IYDKMR----VNGIKPN 410
+ M V+ + PN
Sbjct: 564 VLRTMHKGVSVSSLVPN 580
>gi|255548724|ref|XP_002515418.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223545362|gb|EEF46867.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 1113
Score = 165 bits (417), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 113/425 (26%), Positives = 186/425 (43%), Gaps = 70/425 (16%)
Query: 99 FLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQ 158
F L+ A GK+ D + +L M G P++ ++T + GR GR A I +RM+
Sbjct: 232 FSALMVATGKRRDTETVKSLLEEMESLGLKPNIYTYTICIRVLGRAGRIDEACRIMKRME 291
Query: 159 SSGPRPSALTYQIILKLFVEANKFKEAEEVF---------------MTLLDE-------- 195
G P +TY +++ A K +A E+F +T+LD+
Sbjct: 292 DDGCGPDVVTYTVLIDALCTAGKLDDAMELFVKMKASSHKPDRVTYITMLDKFSDCGDLG 351
Query: 196 ---------EKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLM 246
E PD F +++ KAG ++A L +M ++GV + TYN+L+
Sbjct: 352 RVKEFWSEMEADGYAPDVITFTILVNALCKAGNIDEAFHLLDVMRKQGVLPNLHTYNTLI 411
Query: 247 S--FETN-YKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVR 303
S N + +++ M+ G+ P +Y L I+ YGK+ R ++AL FE+M G+
Sbjct: 412 SGLLRVNRLDDALDLFNNMETLGVVPTAYTYILFIDFYGKSGRSDKALETFEKMKIRGIA 471
Query: 304 PTHKA-----------------------------------YNILLDAFAISGMVDQARTV 328
P A YN+++ ++ +G VD+A +
Sbjct: 472 PNIVACNASLYSLAEMGRLREAKVIFNRLKSNGLAPDSVTYNMMMKCYSKAGQVDEAIEL 531
Query: 329 FKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAK 388
M ++C PDI ++++ A ++ A K F RLK P V+TY TLI G K
Sbjct: 532 LSDMSENQCEPDIIVINSLINTLYKAGRVDEAWKMFCRLKDMKLAPTVVTYNTLIAGLGK 591
Query: 389 VNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKA 448
+++ ME++ M NG PN F TI+D KN + D A+ +M + PD
Sbjct: 592 EGQVQRAMELFASMTGNGCPPNTITFNTILDCLCKNDEVDLALKMLYKMTTMNCMPDVLT 651
Query: 449 KNILL 453
N ++
Sbjct: 652 FNTII 656
Score = 141 bits (356), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 83/299 (27%), Positives = 156/299 (52%), Gaps = 6/299 (2%)
Query: 122 MNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANK 181
M G AP V ++ L++A+G+ G+ ++ +M S +P+ +T+ II+ V++N
Sbjct: 816 MKNAGCAPDVFTYNLLLDAHGKSGKINELFELYEQMICSSCKPNTITHNIIIANLVKSNS 875
Query: 182 FKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVT 241
+A ++F L+ + SP + ++ K+G E+A++LF M + G + +
Sbjct: 876 LDKALDLFYDLVSGDFSP---TPCTYGPLLDGLLKSGRLEEAKELFEEMVDYGCRPNNAI 932
Query: 242 YNSLMSFETNYKEV---SKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEML 298
YN L++ +V +++ +M R G++PD+ SY L+ +A R ++AL FE++
Sbjct: 933 YNILINGFGKTGDVNTACELFKRMVREGIRPDLKSYTSLVGCLCEAGRVDDALHYFEKLK 992
Query: 299 DAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDME 358
G+ AYN+++D S +++A T++ M+ +PD+ +Y +++ A +E
Sbjct: 993 QTGLYLDSIAYNLMIDGLGRSHRIEEALTLYDEMQSRGINPDLFTYNSLILNLGVAGMVE 1052
Query: 359 GAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTI 417
A K + L+ G PNV TY LI+GY+ N + +Y +M V G PN F +
Sbjct: 1053 QAGKLYEELQFIGLEPNVFTYNALIRGYSMSGNSDSAYAVYKRMMVGGCSPNTGTFAQL 1111
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 87/324 (26%), Positives = 164/324 (50%), Gaps = 8/324 (2%)
Query: 143 RGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKP 202
RGG + A F +M+ +G +A +Y ++ L +++ +EA E++ ++ E LKP
Sbjct: 172 RGGLRQTPFA-FGKMREAGFHLNAYSYNGLIHLLLQSGLCREALEMYRRMVLEG---LKP 227
Query: 203 DQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYN---SLMSFETNYKEVSKIY 259
K F ++ K E + L M G++ + TY ++ E +I
Sbjct: 228 SLKTFSALMVATGKRRDTETVKSLLEEMESLGLKPNIYTYTICIRVLGRAGRIDEACRIM 287
Query: 260 DQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAIS 319
+M+ G PDVV+Y +LI+A A + ++A+ +F +M + +P Y +LD F+
Sbjct: 288 KRMEDDGCGPDVVTYTVLIDALCTAGKLDDAMELFVKMKASSHKPDRVTYITMLDKFSDC 347
Query: 320 GMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITY 379
G + + + + M D +PD+ ++T +++A A +++ A +++ G +PN+ TY
Sbjct: 348 GDLGRVKEFWSEMEADGYAPDVITFTILVNALCKAGNIDEAFHLLDVMRKQGVLPNLHTY 407
Query: 380 GTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMES 439
TLI G +VN L+ +++++ M G+ P + +D YGK+ D A+ +++M+
Sbjct: 408 NTLISGLLRVNRLDDALDLFNNMETLGVVPTAYTYILFIDFYGKSGRSDKALETFEKMKI 467
Query: 440 CGFPPDQKAKNI-LLSLAKTADER 462
G P+ A N L SLA+ R
Sbjct: 468 RGIAPNIVACNASLYSLAEMGRLR 491
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 83/334 (24%), Positives = 159/334 (47%), Gaps = 12/334 (3%)
Query: 119 LSFMNKKGYAPSVVSHT----ALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILK 174
S+ N P VV T ++E R + +F MQ+ + TY II K
Sbjct: 108 FSYFNSVAEMPFVVHTTETCNHMLEILRIHRRVGDMVVVFNLMQNQIIKRDLNTYLIIFK 167
Query: 175 -LFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAER 233
LF+ ++ F + ++ + ++ +I++ ++G +A +++ M
Sbjct: 168 GLFIRGG-LRQTPFAFGKM---REAGFHLNAYSYNGLIHLLLQSGLCREALEMYRRMVLE 223
Query: 234 GVQQSTVTYNSLMSFETNYKE---VSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEA 290
G++ S T+++LM ++ V + ++M+ GL+P++ +Y + I G+A R +EA
Sbjct: 224 GLKPSLKTFSALMVATGKRRDTETVKSLLEEMESLGLKPNIYTYTICIRVLGRAGRIDEA 283
Query: 291 LAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSA 350
+ + M D G P Y +L+DA +G +D A +F M+ PD +Y TML
Sbjct: 284 CRIMKRMEDDGCGPDVVTYTVLIDALCTAGKLDDAMELFVKMKASSHKPDRVTYITMLDK 343
Query: 351 YVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPN 410
+ + D+ ++F+ ++ DG+ P+VIT+ L+ K N+++ + D MR G+ PN
Sbjct: 344 FSDCGDLGRVKEFWSEMEADGYAPDVITFTILVNALCKAGNIDEAFHLLDVMRKQGVLPN 403
Query: 411 QTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPP 444
+ T++ + D A+ + ME+ G P
Sbjct: 404 LHTYNTLISGLLRVNRLDDALDLFNNMETLGVVP 437
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 90/386 (23%), Positives = 172/386 (44%), Gaps = 6/386 (1%)
Query: 99 FLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQ 158
+L++ +G + M + G+ + S+ L+ + G + A ++RRM
Sbjct: 162 YLIIFKGLFIRGGLRQTPFAFGKMREAGFHLNAYSYNGLIHLLLQSGLCREALEMYRRMV 221
Query: 159 SSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAG 218
G +PS T+ L V K ++ E V L + E LKP+ + + I + +AG
Sbjct: 222 LEGLKPSLKTFS---ALMVATGKRRDTETVKSLLEEMESLGLKPNIYTYTICIRVLGRAG 278
Query: 219 GYEKARKLFALMAERGVQQSTVTYNSL---MSFETNYKEVSKIYDQMQRAGLQPDVVSYA 275
++A ++ M + G VTY L + + +++ +M+ + +PD V+Y
Sbjct: 279 RIDEACRIMKRMEDDGCGPDVVTYTVLIDALCTAGKLDDAMELFVKMKASSHKPDRVTYI 338
Query: 276 LLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRD 335
+++ + + EM G P + IL++A +G +D+A + MR+
Sbjct: 339 TMLDKFSDCGDLGRVKEFWSEMEADGYAPDVITFTILVNALCKAGNIDEAFHLLDVMRKQ 398
Query: 336 RCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKM 395
P++ +Y T++S + + ++ A F ++ G VP TY I Y K +K
Sbjct: 399 GVLPNLHTYNTLISGLLRVNRLDDALDLFNNMETLGVVPTAYTYILFIDFYGKSGRSDKA 458
Query: 396 MEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSL 455
+E ++KM++ GI PN + + + A V + ++S G PD N+++
Sbjct: 459 LETFEKMKIRGIAPNIVACNASLYSLAEMGRLREAKVIFNRLKSNGLAPDSVTYNMMMKC 518
Query: 456 AKTADERNEANELLGNFNHPNNEPGI 481
A + +EA ELL + + EP I
Sbjct: 519 YSKAGQVDEAIELLSDMSENQCEPDI 544
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 82/347 (23%), Positives = 165/347 (47%), Gaps = 6/347 (1%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
+ + ++ ++ + GD + ++ S M GYAP V++ T L+ A + G A +
Sbjct: 333 DRVTYITMLDKFSDCGDLGRVKEFWSEMEADGYAPDVITFTILVNALCKAGNIDEAFHLL 392
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
M+ G P+ TY ++ + N+ +A ++F + E + P + + I Y
Sbjct: 393 DVMRKQGVLPNLHTYNTLISGLLRVNRLDDALDLFNNM---ETLGVVPTAYTYILFIDFY 449
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYN-SLMSFE--TNYKEVSKIYDQMQRAGLQPDV 271
K+G +KA + F M RG+ + V N SL S +E I+++++ GL PD
Sbjct: 450 GKSGRSDKALETFEKMKIRGIAPNIVACNASLYSLAEMGRLREAKVIFNRLKSNGLAPDS 509
Query: 272 VSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKC 331
V+Y +++ Y KA + +EA+ + +M + P N L++ +G VD+A +F
Sbjct: 510 VTYNMMMKCYSKAGQVDEAIELLSDMSENQCEPDIIVINSLINTLYKAGRVDEAWKMFCR 569
Query: 332 MRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNN 391
++ + +P + +Y T+++ ++ A + F + +G PN IT+ T++ K +
Sbjct: 570 LKDMKLAPTVVTYNTLIAGLGKEGQVQRAMELFASMTGNGCPPNTITFNTILDCLCKNDE 629
Query: 392 LEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEME 438
++ +++ KM P+ F TI+ K A+ + +M+
Sbjct: 630 VDLALKMLYKMTTMNCMPDVLTFNTIIHGLVIEKRVSDAIWLFHQMK 676
Score = 128 bits (321), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 79/308 (25%), Positives = 156/308 (50%), Gaps = 7/308 (2%)
Query: 150 AEAIFRRMQSS-GPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFH 208
A+++F R G +P+ +Y +++ F+ + + A +F + + + PD ++
Sbjct: 773 AQSVFIRFTKELGVKPTLESYNFLIEGFLGVHNDEMAWNLFTEM---KNAGCAPDVFTYN 829
Query: 209 MMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSKIYD---QMQRA 265
+++ + K+G + +L+ M + +T+T+N +++ + K D +
Sbjct: 830 LLLDAHGKSGKINELFELYEQMICSSCKPNTITHNIIIANLVKSNSLDKALDLFYDLVSG 889
Query: 266 GLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQA 325
P +Y L++ K+ R EEA +FEEM+D G RP + YNIL++ F +G V+ A
Sbjct: 890 DFSPTPCTYGPLLDGLLKSGRLEEAKELFEEMVDYGCRPNNAIYNILINGFGKTGDVNTA 949
Query: 326 RTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKG 385
+FK M R+ PD+ SYT+++ A ++ A +F +LKQ G + I Y +I G
Sbjct: 950 CELFKRMVREGIRPDLKSYTSLVGCLCEAGRVDDALHYFEKLKQTGLYLDSIAYNLMIDG 1009
Query: 386 YAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPD 445
+ + +E+ + +YD+M+ GI P+ + +++ G + A Y+E++ G P+
Sbjct: 1010 LGRSHRIEEALTLYDEMQSRGINPDLFTYNSLILNLGVAGMVEQAGKLYEELQFIGLEPN 1069
Query: 446 QKAKNILL 453
N L+
Sbjct: 1070 VFTYNALI 1077
Score = 125 bits (313), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 88/380 (23%), Positives = 171/380 (45%), Gaps = 6/380 (1%)
Query: 89 QSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYK 148
++ + N + LI + G +A ++ M +G PS+ + +ALM A G+ +
Sbjct: 187 EAGFHLNAYSYNGLIHLLLQSGLCREALEMYRRMVLEGLKPSLKTFSALMVATGKRRDTE 246
Query: 149 NAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFH 208
+++ M+S G +P+ TY I +++ A + EA + + D+ PD +
Sbjct: 247 TVKSLLEEMESLGLKPNIYTYTICIRVLGRAGRIDEACRIMKRMEDDGCG---PDVVTYT 303
Query: 209 MMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSKI---YDQMQRA 265
++I AG + A +LF M + VTY +++ ++ ++ ++ + +M+
Sbjct: 304 VLIDALCTAGKLDDAMELFVKMKASSHKPDRVTYITMLDKFSDCGDLGRVKEFWSEMEAD 363
Query: 266 GLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQA 325
G PDV+++ +L+NA KA +EA + + M GV P YN L+ +D A
Sbjct: 364 GYAPDVITFTILVNALCKAGNIDEAFHLLDVMRKQGVLPNLHTYNTLISGLLRVNRLDDA 423
Query: 326 RTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKG 385
+F M P +Y + Y + + A + F ++K G PN++ +
Sbjct: 424 LDLFNNMETLGVVPTAYTYILFIDFYGKSGRSDKALETFEKMKIRGIAPNIVACNASLYS 483
Query: 386 YAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPD 445
A++ L + I+++++ NG+ P+ + +M Y K D A+ +M PD
Sbjct: 484 LAEMGRLREAKVIFNRLKSNGLAPDSVTYNMMMKCYSKAGQVDEAIELLSDMSENQCEPD 543
Query: 446 QKAKNILLSLAKTADERNEA 465
N L++ A +EA
Sbjct: 544 IIVINSLINTLYKAGRVDEA 563
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 72/310 (23%), Positives = 152/310 (49%), Gaps = 11/310 (3%)
Query: 76 WNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHT 135
WN+ +E+ + +N +L+ A+GK G N+ ++ M P+ ++H
Sbjct: 810 WNLFTEMKNAGCAPDVFTYN-----LLLDAHGKSGKINELFELYEQMICSSCKPNTITHN 864
Query: 136 ALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDE 195
++ + A +F + S P+ TY +L +++ + +EA+E+F ++D
Sbjct: 865 IIIANLVKSNSLDKALDLFYDLVSGDFSPTPCTYGPLLDGLLKSGRLEEAKELFEEMVD- 923
Query: 196 EKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEV 255
+P+ +++++I + K G A +LF M G++ +Y SL+ V
Sbjct: 924 --YGCRPNNAIYNILINGFGKTGDVNTACELFKRMVREGIRPDLKSYTSLVGCLCEAGRV 981
Query: 256 S---KIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNIL 312
++++++ GL D ++Y L+I+ G++ R EEAL +++EM G+ P YN L
Sbjct: 982 DDALHYFEKLKQTGLYLDSIAYNLMIDGLGRSHRIEEALTLYDEMQSRGINPDLFTYNSL 1041
Query: 313 LDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGF 372
+ ++GMV+QA +++ ++ P++ +Y ++ Y + + + A ++R+ G
Sbjct: 1042 ILNLGVAGMVEQAGKLYEELQFIGLEPNVFTYNALIRGYSMSGNSDSAYAVYKRMMVGGC 1101
Query: 373 VPNVITYGTL 382
PN T+ L
Sbjct: 1102 SPNTGTFAQL 1111
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 91/357 (25%), Positives = 159/357 (44%), Gaps = 48/357 (13%)
Query: 87 RIQSWWDFNEMD--------FLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALM 138
R++ +W E D F +L+ A K G+ ++A +L M K+G P++ ++ L+
Sbjct: 352 RVKEFWSEMEADGYAPDVITFTILVNALCKAGNIDEAFHLLDVMRKQGVLPNLHTYNTLI 411
Query: 139 EAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVF--------- 189
R R +A +F M++ G P+A TY + + + ++ + +A E F
Sbjct: 412 SGLLRVNRLDDALDLFNNMETLGVVPTAYTYILFIDFYGKSGRSDKALETFEKMKIRGIA 471
Query: 190 ---------------MTLLDEEK--------SPLKPDQKMFHMMIYMYKKAGGYEKARKL 226
M L E K + L PD ++MM+ Y KAG ++A +L
Sbjct: 472 PNIVACNASLYSLAEMGRLREAKVIFNRLKSNGLAPDSVTYNMMMKCYSKAGQVDEAIEL 531
Query: 227 FALMAERGVQQSTVTYNSLMSFETNYK-----EVSKIYDQMQRAGLQPDVVSYALLINAY 281
+ M+E + + NSL++ T YK E K++ +++ L P VV+Y LI
Sbjct: 532 LSDMSENQCEPDIIVINSLIN--TLYKAGRVDEAWKMFCRLKDMKLAPTVVTYNTLIAGL 589
Query: 282 GKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDI 341
GK + + A+ +F M G P +N +LD + VD A + M C PD+
Sbjct: 590 GKEGQVQRAMELFASMTGNGCPPNTITFNTILDCLCKNDEVDLALKMLYKMTTMNCMPDV 649
Query: 342 CSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEI 398
++ T++ V + A F ++K+ P+ +T TL+ G K +E +I
Sbjct: 650 LTFNTIIHGLVIEKRVSDAIWLFHQMKK-MLTPDCVTLCTLLPGVVKNGLMEDAFKI 705
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 78/330 (23%), Positives = 154/330 (46%), Gaps = 6/330 (1%)
Query: 119 LSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVE 178
+ F + G P++ S+ L+E + + A +F M+++G P TY ++L +
Sbjct: 778 IRFTKELGVKPTLESYNFLIEGFLGVHNDEMAWNLFTEMKNAGCAPDVFTYNLLLDAHGK 837
Query: 179 ANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQS 238
+ K E E++ ++ S KP+ +++I K+ +KA LF + +
Sbjct: 838 SGKINELFELYEQMI---CSSCKPNTITHNIIIANLVKSNSLDKALDLFYDLVSGDFSPT 894
Query: 239 TVTYNSLMSF---ETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFE 295
TY L+ +E +++++M G +P+ Y +LIN +GK A +F+
Sbjct: 895 PCTYGPLLDGLLKSGRLEEAKELFEEMVDYGCRPNNAIYNILINGFGKTGDVNTACELFK 954
Query: 296 EMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNAS 355
M+ G+RP K+Y L+ +G VD A F+ +++ D +Y M+ +
Sbjct: 955 RMVREGIRPDLKSYTSLVGCLCEAGRVDDALHYFEKLKQTGLYLDSIAYNLMIDGLGRSH 1014
Query: 356 DMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFT 415
+E A + ++ G P++ TY +LI +E+ ++Y++++ G++PN +
Sbjct: 1015 RIEEALTLYDEMQSRGINPDLFTYNSLILNLGVAGMVEQAGKLYEELQFIGLEPNVFTYN 1074
Query: 416 TIMDAYGKNKDFDSAVVWYKEMESCGFPPD 445
++ Y + + DSA YK M G P+
Sbjct: 1075 ALIRGYSMSGNSDSAYAVYKRMMVGGCSPN 1104
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 70/313 (22%), Positives = 146/313 (46%), Gaps = 5/313 (1%)
Query: 172 ILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMA 231
I+K+ + + A+ VF+ E +KP + ++ +I + E A LF M
Sbjct: 760 IIKVLCKHKQALVAQSVFIRFTKELG--VKPTLESYNFLIEGFLGVHNDEMAWNLFTEMK 817
Query: 232 ERGVQQSTVTYNSLMSFETN---YKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREE 288
G TYN L+ E+ ++Y+QM + +P+ +++ ++I K+ +
Sbjct: 818 NAGCAPDVFTYNLLLDAHGKSGKINELFELYEQMICSSCKPNTITHNIIIANLVKSNSLD 877
Query: 289 EALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTML 348
+AL +F +++ PT Y LLD SG +++A+ +F+ M C P+ Y ++
Sbjct: 878 KALDLFYDLVSGDFSPTPCTYGPLLDGLLKSGRLEEAKELFEEMVDYGCRPNNAIYNILI 937
Query: 349 SAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIK 408
+ + D+ A + F+R+ ++G P++ +Y +L+ + ++ + ++K++ G+
Sbjct: 938 NGFGKTGDVNTACELFKRMVREGIRPDLKSYTSLVGCLCEAGRVDDALHYFEKLKQTGLY 997
Query: 409 PNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANEL 468
+ + ++D G++ + A+ Y EM+S G PD N L+ A +A +L
Sbjct: 998 LDSIAYNLMIDGLGRSHRIEEALTLYDEMQSRGINPDLFTYNSLILNLGVAGMVEQAGKL 1057
Query: 469 LGNFNHPNNEPGI 481
EP +
Sbjct: 1058 YEELQFIGLEPNV 1070
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 93/183 (50%), Gaps = 8/183 (4%)
Query: 101 MLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSS 160
+LI +GK GD N A ++ M ++G P + S+T+L+ GR +A F +++ +
Sbjct: 935 ILINGFGKTGDVNTACELFKRMVREGIRPDLKSYTSLVGCLCEAGRVDDALHYFEKLKQT 994
Query: 161 GPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKS-PLKPDQKMFHMMIYMYKKAGG 219
G ++ Y +++ +++ +EA +TL DE +S + PD ++ +I AG
Sbjct: 995 GLYLDSIAYNLMIDGLGRSHRIEEA----LTLYDEMQSRGINPDLFTYNSLILNLGVAGM 1050
Query: 220 YEKARKLFALMAERGVQQSTVTYNSLM---SFETNYKEVSKIYDQMQRAGLQPDVVSYAL 276
E+A KL+ + G++ + TYN+L+ S N +Y +M G P+ ++A
Sbjct: 1051 VEQAGKLYEELQFIGLEPNVFTYNALIRGYSMSGNSDSAYAVYKRMMVGGCSPNTGTFAQ 1110
Query: 277 LIN 279
L N
Sbjct: 1111 LPN 1113
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/218 (20%), Positives = 97/218 (44%), Gaps = 9/218 (4%)
Query: 235 VQQSTVTYNSLMSFETNYKEVSK---IYDQMQRAGLQPDVVSYALLINAY---GKARREE 288
V +T T N ++ ++ V +++ MQ ++ D+ +Y ++ G R+
Sbjct: 120 VVHTTETCNHMLEILRIHRRVGDMVVVFNLMQNQIIKRDLNTYLIIFKGLFIRGGLRQTP 179
Query: 289 EALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTML 348
A F +M +AG +YN L+ SG+ +A +++ M + P + +++ ++
Sbjct: 180 FA---FGKMREAGFHLNAYSYNGLIHLLLQSGLCREALEMYRRMVLEGLKPSLKTFSALM 236
Query: 349 SAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIK 408
A D E + ++ G PN+ TY I+ + +++ I +M +G
Sbjct: 237 VATGKRRDTETVKSLLEEMESLGLKPNIYTYTICIRVLGRAGRIDEACRIMKRMEDDGCG 296
Query: 409 PNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQ 446
P+ +T ++DA D A+ + +M++ PD+
Sbjct: 297 PDVVTYTVLIDALCTAGKLDDAMELFVKMKASSHKPDR 334
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/195 (23%), Positives = 83/195 (42%)
Query: 285 RREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSY 344
RR + + VF M + ++ Y I+ I G + Q F MR + SY
Sbjct: 138 RRVGDMVVVFNLMQNQIIKRDLNTYLIIFKGLFIRGGLRQTPFAFGKMREAGFHLNAYSY 197
Query: 345 TTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRV 404
++ + + A + +RR+ +G P++ T+ L+ K + E + + ++M
Sbjct: 198 NGLIHLLLQSGLCREALEMYRRMVLEGLKPSLKTFSALMVATGKRRDTETVKSLLEEMES 257
Query: 405 NGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNE 464
G+KPN +T + G+ D A K ME G PD +L+ TA + ++
Sbjct: 258 LGLKPNIYTYTICIRVLGRAGRIDEACRIMKRMEDDGCGPDVVTYTVLIDALCTAGKLDD 317
Query: 465 ANELLGNFNHPNNEP 479
A EL +++P
Sbjct: 318 AMELFVKMKASSHKP 332
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/220 (21%), Positives = 88/220 (40%), Gaps = 14/220 (6%)
Query: 284 ARREEEALAVFEEMLDAG--------------VRPTHKAYNILLDAFAISGMVDQARTVF 329
A +E +AV +LD V T + N +L+ I V VF
Sbjct: 88 ALSSKEVMAVLNSILDPTDAFSYFNSVAEMPFVVHTTETCNHMLEILRIHRRVGDMVVVF 147
Query: 330 KCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKV 389
M+ D+ +Y + + F ++++ GF N +Y LI +
Sbjct: 148 NLMQNQIIKRDLNTYLIIFKGLFIRGGLRQTPFAFGKMREAGFHLNAYSYNGLIHLLLQS 207
Query: 390 NNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAK 449
+ +E+Y +M + G+KP+ F+ +M A GK +D ++ +EMES G P+
Sbjct: 208 GLCREALEMYRRMVLEGLKPSLKTFSALMVATGKRRDTETVKSLLEEMESLGLKPNIYTY 267
Query: 450 NILLSLAKTADERNEANELLGNFNHPNNEPGINGLSISVD 489
I + + A +EA ++ P + ++ +D
Sbjct: 268 TICIRVLGRAGRIDEACRIMKRMEDDGCGPDVVTYTVLID 307
>gi|356510082|ref|XP_003523769.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Glycine max]
Length = 602
Score = 165 bits (417), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 111/414 (26%), Positives = 181/414 (43%), Gaps = 40/414 (9%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
LI + + G KA +++ + G P V+++ L+ Y + G A + RM +
Sbjct: 147 LIRGFCRSGKTKKATRIMEILENSGAVPDVITYNVLIGGYCKSGEIDKALEVLERMSVA- 205
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVF-------------------------------M 190
P +TY IL+ ++ K KEA EV M
Sbjct: 206 --PDVVTYNTILRSLCDSGKLKEAMEVLDRQLQRECYPDVITYTILIEATCNDSGVGQAM 263
Query: 191 TLLDE-EKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSL---M 246
LLDE K KPD ++++I K G ++A K M G + + +T+N + M
Sbjct: 264 KLLDEMRKKGCKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCKPNVITHNIILRSM 323
Query: 247 SFETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTH 306
+ + ++ M R G P VV++ +LIN + R A+ V E+M G P
Sbjct: 324 CSTGRWMDAERLLSDMLRKGCSPSVVTFNILINFLCRKRLLGRAIDVLEKMPKHGCVPNS 383
Query: 307 KAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRR 366
+YN LL F +D+A + M C PDI +Y T+L+A ++ A + +
Sbjct: 384 LSYNPLLHGFCQEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKVDAAVEILNQ 443
Query: 367 LKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKD 426
L G P +ITY T+I G KV E +E+ ++MR G+KP+ ++T++ G+
Sbjct: 444 LSSKGCSPVLITYNTVIDGLTKVGKTEYAVELLEEMRRKGLKPDIITYSTLLRGLGREGK 503
Query: 427 FDSAVVWYKEMESCGFPPDQKAKN-ILLSLAKTADERNEANELLGNFNHPNNEP 479
D A+ + +ME P N I+L L K A + + A + L +P
Sbjct: 504 VDEAIKIFHDMEGLSIKPSAVTYNAIMLGLCK-AQQTSRAIDFLAYMVEKGCKP 556
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 96/407 (23%), Positives = 185/407 (45%), Gaps = 11/407 (2%)
Query: 108 KQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSAL 167
+ G+ + K L M +G P V++ T+L+ + R G+ K A I +++SG P +
Sbjct: 118 RNGELEEGLKFLERMIYQGDIPDVIACTSLIRGFCRSGKTKKATRIMEILENSGAVPDVI 177
Query: 168 TYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLF 227
TY +++ + ++ + +A EV E+ + PD ++ ++ +G ++A ++
Sbjct: 178 TYNVLIGGYCKSGEIDKALEVL------ERMSVAPDVVTYNTILRSLCDSGKLKEAMEVL 231
Query: 228 ALMAERGVQQSTVTYNSLMSFETNYKEVS---KIYDQMQRAGLQPDVVSYALLINAYGKA 284
+R +TY L+ N V K+ D+M++ G +PDVV+Y +LIN K
Sbjct: 232 DRQLQRECYPDVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYNVLINGICKE 291
Query: 285 RREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSY 344
R +EA+ M G +P +NI+L + +G A + M R CSP + ++
Sbjct: 292 GRLDEAIKFLNNMPSYGCKPNVITHNIILRSMCSTGRWMDAERLLSDMLRKGCSPSVVTF 351
Query: 345 TTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRV 404
+++ + A ++ + G VPN ++Y L+ G+ + +++ +E + M
Sbjct: 352 NILINFLCRKRLLGRAIDVLEKMPKHGCVPNSLSYNPLLHGFCQEKKMDRAIEYLEIMVS 411
Query: 405 NGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNE 464
G P+ + T++ A K+ D+AV ++ S G P N ++ +
Sbjct: 412 RGCYPDIVTYNTLLTALCKDGKVDAAVEILNQLSSKGCSPVLITYNTVIDGLTKVGKTEY 471
Query: 465 ANELLGNFNHPNNEPGINGLSISVDEEDDDDDDDEDDDDNIYHDGDG 511
A ELL +P I ++ S + D+ I+HD +G
Sbjct: 472 AVELLEEMRRKGLKPDI--ITYSTLLRGLGREGKVDEAIKIFHDMEG 516
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 83/356 (23%), Positives = 160/356 (44%), Gaps = 8/356 (2%)
Query: 70 LKQLKKWNVVSEVLEWL--RIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGY 127
L+ L + E +E L ++Q + + + +LI A +A K+L M KKG
Sbjct: 215 LRSLCDSGKLKEAMEVLDRQLQRECYPDVITYTILIEATCNDSGVGQAMKLLDEMRKKGC 274
Query: 128 APSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEE 187
P VV++ L+ + GR A M S G +P+ +T+ IIL+ ++ +AE
Sbjct: 275 KPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCKPNVITHNIILRSMCSTGRWMDAER 334
Query: 188 VFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMS 247
+ +L + SP F+++I + +A + M + G ++++YN L+
Sbjct: 335 LLSDMLRKGCSP---SVVTFNILINFLCRKRLLGRAIDVLEKMPKHGCVPNSLSYNPLLH 391
Query: 248 FETNYKEVSKIYDQMQ---RAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRP 304
K++ + + ++ G PD+V+Y L+ A K + + A+ + ++ G P
Sbjct: 392 GFCQEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKVDAAVEILNQLSSKGCSP 451
Query: 305 THKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFF 364
YN ++D G + A + + MRR PDI +Y+T+L ++ A K F
Sbjct: 452 VLITYNTVIDGLTKVGKTEYAVELLEEMRRKGLKPDIITYSTLLRGLGREGKVDEAIKIF 511
Query: 365 RRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDA 420
++ P+ +TY ++ G K + ++ M G KP + +T +++
Sbjct: 512 HDMEGLSIKPSAVTYNAIMLGLCKAQQTSRAIDFLAYMVEKGCKPTEATYTILIEG 567
Score = 47.8 bits (112), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 30/122 (24%), Positives = 55/122 (45%), Gaps = 3/122 (2%)
Query: 348 LSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGI 407
L V ++E KF R+ G +P+VI +LI+G+ + +K I + + +G
Sbjct: 113 LRKLVRNGELEEGLKFLERMIYQGDIPDVIACTSLIRGFCRSGKTKKATRIMEILENSGA 172
Query: 408 KPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANE 467
P+ + ++ Y K+ + D A+ + M PD N +L + + EA E
Sbjct: 173 VPDVITYNVLIGGYCKSGEIDKALEVLERMS---VAPDVVTYNTILRSLCDSGKLKEAME 229
Query: 468 LL 469
+L
Sbjct: 230 VL 231
>gi|32488707|emb|CAE03450.1| OSJNBa0088H09.8 [Oryza sativa Japonica Group]
Length = 905
Score = 164 bits (416), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 97/365 (26%), Positives = 180/365 (49%), Gaps = 12/365 (3%)
Query: 98 DFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRM 157
+F ++I Y K+GD + A M +G P+ T+L+ AY + A + M
Sbjct: 299 EFGLMIVYYAKRGDKHHARATFENMRARGIEPNAFVFTSLVHAYAVARDMRGALSCVEEM 358
Query: 158 QSSGPRPSALTYQIILKLFVEAN------KFKEAEEVFMTLLDEEKSPLKPDQKMFHMMI 211
+S G + +TY I++ F + N + AEE+ + E+ + ++H M+
Sbjct: 359 KSEGLELTIVTYSILISGFAKINDSHQSGNMERAEELVREM---EEDGIDAPIDVYHSMM 415
Query: 212 YMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSK---IYDQMQRAGLQ 268
+ Y K +F + E G + S ++Y L++ +V+K I +M+ G++
Sbjct: 416 HGYTIIQNENKCLVVFERLKECGFKPSIISYGCLLNLYVKIGKVAKALSISKEMESCGIK 475
Query: 269 PDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTV 328
+ +Y++LIN + A A+FEEML +G++P YN+L++AF G +D+A +
Sbjct: 476 HNNKTYSMLINGFIHLHDFANAFAIFEEMLRSGLQPDRAIYNLLIEAFCKMGNMDRAICI 535
Query: 329 FKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAK 388
+ M+++R P ++ ++ Y A DM+ A +++ G VP V+TY LI G +
Sbjct: 536 LEKMQKERMQPSNRAFRPIIEGYAVAGDMKSALDTLDLMRRSGCVPTVMTYNALIHGLVR 595
Query: 389 VNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKA 448
+ +++ + + DKM + GI PN+ +T IM Y + D A ++ +++ G D
Sbjct: 596 KHKVQRAVSVLDKMSIAGITPNEHTYTIIMRGYAASGDIGKAFEYFTKIKESGLKLDVYI 655
Query: 449 KNILL 453
LL
Sbjct: 656 YETLL 660
Score = 142 bits (359), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 88/380 (23%), Positives = 181/380 (47%), Gaps = 41/380 (10%)
Query: 113 NKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQII 172
NK V + + G+ PS++S+ L+ Y + G+ A +I + M+S G + + TY ++
Sbjct: 425 NKCLVVFERLKECGFKPSIISYGCLLNLYVKIGKVAKALSISKEMESCGIKHNNKTYSML 484
Query: 173 LKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAE 232
+ F+ + F A +F +L +S L+PD+ +++++I + K G ++A + M +
Sbjct: 485 INGFIHLHDFANAFAIFEEML---RSGLQPDRAIYNLLIEAFCKMGNMDRAICILEKMQK 541
Query: 233 RGVQQSTVTYNSLM---SFETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEE 289
+Q S + ++ + + K D M+R+G P V++Y LI+ + + +
Sbjct: 542 ERMQPSNRAFRPIIEGYAVAGDMKSALDTLDLMRRSGCVPTVMTYNALIHGLVRKHKVQR 601
Query: 290 ALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLS 349
A++V ++M AG+ P Y I++ +A SG + +A F ++ D+ Y T+L
Sbjct: 602 AVSVLDKMSIAGITPNEHTYTIIMRGYAASGDIGKAFEYFTKIKESGLKLDVYIYETLLR 661
Query: 350 AYVNASDMEGA-----------------------------------EKFFRRLKQDGFVP 374
A + M+ A E +++K+DG P
Sbjct: 662 ACCKSGRMQSALAVTREMSFQKIPRNTFIYNILIDGWARRGDVWEAEDLMKQMKEDGVPP 721
Query: 375 NVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWY 434
N+ TY + I K ++++ ++ ++M G+KPN +TT++ + + D A+ +
Sbjct: 722 NIHTYTSYINACCKAGDMQRAEKVIEEMVDVGLKPNVKTYTTLIKGWARVSLPDRALKCF 781
Query: 435 KEMESCGFPPDQKAKNILLS 454
+EM+ G PD+ + + L++
Sbjct: 782 EEMKLAGLKPDEASYHCLVT 801
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 97/361 (26%), Positives = 179/361 (49%), Gaps = 10/361 (2%)
Query: 63 VLGTLVRLKQLKKWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFM 122
+L V++ ++ K +S+ +E I+ N + MLI + DF A + M
Sbjct: 449 LLNLYVKIGKVAKALSISKEMESCGIKH----NNKTYSMLINGFIHLHDFANAFAIFEEM 504
Query: 123 NKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKF 182
+ G P + L+EA+ + G A I +MQ +PS ++ I++ + A
Sbjct: 505 LRSGLQPDRAIYNLLIEAFCKMGNMDRAICILEKMQKERMQPSNRAFRPIIEGYAVAGDM 564
Query: 183 KEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTY 242
K A + TL +S P ++ +I+ + ++A + M+ G+ + TY
Sbjct: 565 KSALD---TLDLMRRSGCVPTVMTYNALIHGLVRKHKVQRAVSVLDKMSIAGITPNEHTY 621
Query: 243 NSLMSFETNYKEVSKIYD---QMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLD 299
+M ++ K ++ +++ +GL+ DV Y L+ A K+ R + ALAV EM
Sbjct: 622 TIIMRGYAASGDIGKAFEYFTKIKESGLKLDVYIYETLLRACCKSGRMQSALAVTREMSF 681
Query: 300 AGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEG 359
+ YNIL+D +A G V +A + K M+ D P+I +YT+ ++A A DM+
Sbjct: 682 QKIPRNTFIYNILIDGWARRGDVWEAEDLMKQMKEDGVPPNIHTYTSYINACCKAGDMQR 741
Query: 360 AEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMD 419
AEK + G PNV TY TLIKG+A+V+ ++ ++ +++M++ G+KP++ + ++
Sbjct: 742 AEKVIEEMVDVGLKPNVKTYTTLIKGWARVSLPDRALKCFEEMKLAGLKPDEASYHCLVT 801
Query: 420 A 420
+
Sbjct: 802 S 802
Score = 108 bits (270), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 72/266 (27%), Positives = 133/266 (50%), Gaps = 7/266 (2%)
Query: 99 FLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQ 158
F +I Y GD A L M + G P+V+++ AL+ R + + A ++ +M
Sbjct: 551 FRPIIEGYAVAGDMKSALDTLDLMRRSGCVPTVMTYNALIHGLVRKHKVQRAVSVLDKMS 610
Query: 159 SSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAG 218
+G P+ TY II++ + + +A E F + ++S LK D ++ ++ K+G
Sbjct: 611 IAGITPNEHTYTIIMRGYAASGDIGKAFEYFTKI---KESGLKLDVYIYETLLRACCKSG 667
Query: 219 GYEKARKLFALMAERGVQQSTVTYNSLM---SFETNYKEVSKIYDQMQRAGLQPDVVSYA 275
+ A + M+ + + ++T YN L+ + + E + QM+ G+ P++ +Y
Sbjct: 668 RMQSALAVTREMSFQKIPRNTFIYNILIDGWARRGDVWEAEDLMKQMKEDGVPPNIHTYT 727
Query: 276 LLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRD 335
INA KA + A V EEM+D G++P K Y L+ +A + D+A F+ M+
Sbjct: 728 SYINACCKAGDMQRAEKVIEEMVDVGLKPNVKTYTTLIKGWARVSLPDRALKCFEEMKLA 787
Query: 336 RCSPDICSYTTMLSAYVN-ASDMEGA 360
PD SY ++++ ++ A+ MEG+
Sbjct: 788 GLKPDEASYHCLVTSLLSRATVMEGS 813
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 74/272 (27%), Positives = 117/272 (43%), Gaps = 44/272 (16%)
Query: 188 VFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMS 247
+F LL E P ++ F +MI Y K G AR F M RG+
Sbjct: 287 LFKKLLHE------PSRREFGLMIVYYAKRGDKHHARATFENMRARGI------------ 328
Query: 248 FETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHK 307
+P+ + L++AY AR AL+ EEM G+ T
Sbjct: 329 --------------------EPNAFVFTSLVHAYAVARDMRGALSCVEEMKSEGLELTIV 368
Query: 308 AYNILLDAFAI------SGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAE 361
Y+IL+ FA SG +++A + + M D I Y +M+ Y +
Sbjct: 369 TYSILISGFAKINDSHQSGNMERAEELVREMEEDGIDAPIDVYHSMMHGYTIIQNENKCL 428
Query: 362 KFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAY 421
F RLK+ GF P++I+YG L+ Y K+ + K + I +M GIK N ++ +++ +
Sbjct: 429 VVFERLKECGFKPSIISYGCLLNLYVKIGKVAKALSISKEMESCGIKHNNKTYSMLINGF 488
Query: 422 GKNKDFDSAVVWYKEMESCGFPPDQKAKNILL 453
DF +A ++EM G PD+ N+L+
Sbjct: 489 IHLHDFANAFAIFEEMLRSGLQPDRAIYNLLI 520
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 48/193 (24%), Positives = 96/193 (49%), Gaps = 6/193 (3%)
Query: 268 QPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQART 327
+P + L+I Y K + A A FE M G+ P + L+ A+A++ + A +
Sbjct: 294 EPSRREFGLMIVYYAKRGDKHHARATFENMRARGIEPNAFVFTSLVHAYAVARDMRGALS 353
Query: 328 VFKCMRRDRCSPDICSYTTMLSAYVNASD------MEGAEKFFRRLKQDGFVPNVITYGT 381
+ M+ + I +Y+ ++S + +D ME AE+ R +++DG + Y +
Sbjct: 354 CVEEMKSEGLELTIVTYSILISGFAKINDSHQSGNMERAEELVREMEEDGIDAPIDVYHS 413
Query: 382 LIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCG 441
++ GY + N K + ++++++ G KP+ + +++ Y K A+ KEMESCG
Sbjct: 414 MMHGYTIIQNENKCLVVFERLKECGFKPSIISYGCLLNLYVKIGKVAKALSISKEMESCG 473
Query: 442 FPPDQKAKNILLS 454
+ K ++L++
Sbjct: 474 IKHNNKTYSMLIN 486
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 81/158 (51%), Gaps = 6/158 (3%)
Query: 304 PTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKF 363
P+ + + +++ +A G AR F+ MR P+ +T+++ AY A DM GA
Sbjct: 295 PSRREFGLMIVYYAKRGDKHHARATFENMRARGIEPNAFVFTSLVHAYAVARDMRGALSC 354
Query: 364 FRRLKQDGFVPNVITYGTLIKGYAKVN------NLEKMMEIYDKMRVNGIKPNQTIFTTI 417
+K +G ++TY LI G+AK+N N+E+ E+ +M +GI ++ ++
Sbjct: 355 VEEMKSEGLELTIVTYSILISGFAKINDSHQSGNMERAEELVREMEEDGIDAPIDVYHSM 414
Query: 418 MDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSL 455
M Y ++ + +V ++ ++ CGF P + LL+L
Sbjct: 415 MHGYTIIQNENKCLVVFERLKECGFKPSIISYGCLLNL 452
>gi|119638441|gb|ABL85032.1| auxin efflux carrier [Brachypodium sylvaticum]
Length = 895
Score = 164 bits (416), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 101/383 (26%), Positives = 194/383 (50%), Gaps = 7/383 (1%)
Query: 74 KKWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVS 133
+ ++ +V E +R + NE+ + ++I+ + G +A M G +P +
Sbjct: 257 RDFDAAKKVFEEMRRRDCA-MNEVTYNVMISGLCRSGAVEEAFGFKEEMVDYGLSPDAFT 315
Query: 134 HTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLL 193
+ ALM +G R K A+A+ M SG +P+ + Y ++ F++ K EA ++ ++
Sbjct: 316 YGALMNGLCKGSRLKEAKALLDEMSCSGLKPNIVVYGTLVDGFMKEGKTAEAFDILKEMI 375
Query: 194 DEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMS--FETN 251
+ ++P++ M+ +I K G +A KL M + G++ T TYN LM F+ +
Sbjct: 376 ---SAGVQPNKIMYDNLIRGLCKIGQLGRASKLLKEMIKVGLRPDTFTYNPLMQGHFQQH 432
Query: 252 YKEVS-KIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYN 310
K+ + ++ ++M+ +G+ P+V SY ++IN + +EA + EEM+ G++P Y
Sbjct: 433 DKDGAFELLNEMRNSGILPNVYSYGIMINGLCQNGESKEAGNLLEEMISEGLKPNAFMYA 492
Query: 311 ILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQD 370
L+ + G + A + M + PD+ Y +++ ME AE+++ ++++
Sbjct: 493 PLIIGHSKEGNISLACEALEKMTKANVHPDLFCYNSLIKGLSTVGRMEEAEEYYAQVQKR 552
Query: 371 GFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSA 430
G VP+ TY LI GY K NLEK ++ +M +G+KPN +T +++ Y K+ D++
Sbjct: 553 GLVPDEFTYSGLIHGYCKTGNLEKADQLLRQMLNSGLKPNADTYTDLLEGYFKSNDYEKV 612
Query: 431 VVWYKEMESCGFPPDQKAKNILL 453
+ M G PD I++
Sbjct: 613 SSILQSMLGSGDKPDNHIYGIVI 635
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 103/444 (23%), Positives = 194/444 (43%), Gaps = 39/444 (8%)
Query: 59 PKDLVLGTLVRLKQLKKWNVVSEVLEWLR--IQSWWDFNEMDFLMLITAYGKQGDFNKAE 116
P +V GTLV K +E + L+ I + N++ + LI K G +A
Sbjct: 346 PNIVVYGTLV--DGFMKEGKTAEAFDILKEMISAGVQPNKIMYDNLIRGLCKIGQLGRAS 403
Query: 117 KVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLF 176
K+L M K G P ++ LM+ + + A + M++SG P+ +Y I++
Sbjct: 404 KLLKEMIKVGLRPDTFTYNPLMQGHFQQHDKDGAFELLNEMRNSGILPNVYSYGIMINGL 463
Query: 177 VEANKFKEAEEVFMTLLDEEKSP--------------------------------LKPDQ 204
+ + KEA + ++ E P + PD
Sbjct: 464 CQNGESKEAGNLLEEMISEGLKPNAFMYAPLIIGHSKEGNISLACEALEKMTKANVHPDL 523
Query: 205 KMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLM---SFETNYKEVSKIYDQ 261
++ +I G E+A + +A + +RG+ TY+ L+ N ++ ++ Q
Sbjct: 524 FCYNSLIKGLSTVGRMEEAEEYYAQVQKRGLVPDEFTYSGLIHGYCKTGNLEKADQLLRQ 583
Query: 262 MQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGM 321
M +GL+P+ +Y L+ Y K+ E+ ++ + ML +G +P + Y I++ + S
Sbjct: 584 MLNSGLKPNADTYTDLLEGYFKSNDYEKVSSILQSMLGSGDKPDNHIYGIVIRNLSRSEN 643
Query: 322 VDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGT 381
++ A V + ++ PD+ Y++++S +DME A + ++G P ++ Y
Sbjct: 644 MEVAFMVLTEVEKNGLVPDLHIYSSLISGLCKIADMEKAVGLLDEMAKEGLEPGIVCYNA 703
Query: 382 LIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCG 441
LI G+ + ++ + ++D + G+ PN +T ++D KN D A YKEM G
Sbjct: 704 LIDGFCRSGDISRARNVFDSILAKGLVPNCVTYTALIDGNCKNGDITDAFDLYKEMLDRG 763
Query: 442 FPPDQKAKNILLSLAKTADERNEA 465
PD N+L + A + +A
Sbjct: 764 IAPDAFVYNVLATGCSDAADLEQA 787
Score = 132 bits (331), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 88/370 (23%), Positives = 166/370 (44%), Gaps = 6/370 (1%)
Query: 101 MLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSS 160
+L+ Y K G A +V+ M G AP+ L++ R + + M+ +
Sbjct: 178 VLVDTYKKTGSVRNAAQVVLMMADLGLAPTRRCCNGLLKDLLRADAMELLWKLKGFMEGA 237
Query: 161 GPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGY 220
G P TY ++ +A F A++VF + + ++ +++MI ++G
Sbjct: 238 GILPDVYTYSTFIEAHCKARDFDAAKKVFEEM---RRRDCAMNEVTYNVMISGLCRSGAV 294
Query: 221 EKARKLFALMAERGVQQSTVTYNSLMSF---ETNYKEVSKIYDQMQRAGLQPDVVSYALL 277
E+A M + G+ TY +LM+ + KE + D+M +GL+P++V Y L
Sbjct: 295 EEAFGFKEEMVDYGLSPDAFTYGALMNGLCKGSRLKEAKALLDEMSCSGLKPNIVVYGTL 354
Query: 278 INAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRC 337
++ + K + EA + +EM+ AGV+P Y+ L+ G + +A + K M +
Sbjct: 355 VDGFMKEGKTAEAFDILKEMISAGVQPNKIMYDNLIRGLCKIGQLGRASKLLKEMIKVGL 414
Query: 338 SPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMME 397
PD +Y ++ + D +GA + ++ G +PNV +YG +I G + ++
Sbjct: 415 RPDTFTYNPLMQGHFQQHDKDGAFELLNEMRNSGILPNVYSYGIMINGLCQNGESKEAGN 474
Query: 398 IYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAK 457
+ ++M G+KPN ++ ++ + K + A ++M PD N L+
Sbjct: 475 LLEEMISEGLKPNAFMYAPLIIGHSKEGNISLACEALEKMTKANVHPDLFCYNSLIKGLS 534
Query: 458 TADERNEANE 467
T EA E
Sbjct: 535 TVGRMEEAEE 544
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 84/351 (23%), Positives = 156/351 (44%), Gaps = 6/351 (1%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + ++I + G+ +A +L M +G P+ + L+ + + G A
Sbjct: 452 NVYSYGIMINGLCQNGESKEAGNLLEEMISEGLKPNAFMYAPLIIGHSKEGNISLACEAL 511
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
+M + P Y ++K + +EAEE + + +K L PD+ + +I+ Y
Sbjct: 512 EKMTKANVHPDLFCYNSLIKGLSTVGRMEEAEEYYAQV---QKRGLVPDEFTYSGLIHGY 568
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSLMS--FETN-YKEVSKIYDQMQRAGLQPDV 271
K G EKA +L M G++ + TY L+ F++N Y++VS I M +G +PD
Sbjct: 569 CKTGNLEKADQLLRQMLNSGLKPNADTYTDLLEGYFKSNDYEKVSSILQSMLGSGDKPDN 628
Query: 272 VSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKC 331
Y ++I ++ E A V E+ G+ P Y+ L+ +++A +
Sbjct: 629 HIYGIVIRNLSRSENMEVAFMVLTEVEKNGLVPDLHIYSSLISGLCKIADMEKAVGLLDE 688
Query: 332 MRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNN 391
M ++ P I Y ++ + + D+ A F + G VPN +TY LI G K +
Sbjct: 689 MAKEGLEPGIVCYNALIDGFCRSGDISRARNVFDSILAKGLVPNCVTYTALIDGNCKNGD 748
Query: 392 LEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGF 442
+ ++Y +M GI P+ ++ + D + A+ +EM + G+
Sbjct: 749 ITDAFDLYKEMLDRGIAPDAFVYNVLATGCSDAADLEQALFLTEEMFNRGY 799
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 81/340 (23%), Positives = 161/340 (47%), Gaps = 7/340 (2%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
LI G +AE+ + + K+G P +++ L+ Y + G + A+ + R+M +SG
Sbjct: 529 LIKGLSTVGRMEEAEEYYAQVQKRGLVPDEFTYSGLIHGYCKTGNLEKADQLLRQMLNSG 588
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
+P+A TY +L+ + ++N +++ + ++L S KPD ++ ++I ++ E
Sbjct: 589 LKPNADTYTDLLEGYFKSNDYEKVSSILQSMLG---SGDKPDNHIYGIVIRNLSRSENME 645
Query: 222 KARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSK---IYDQMQRAGLQPDVVSYALLI 278
A + + + G+ Y+SL+S ++ K + D+M + GL+P +V Y LI
Sbjct: 646 VAFMVLTEVEKNGLVPDLHIYSSLISGLCKIADMEKAVGLLDEMAKEGLEPGIVCYNALI 705
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCS 338
+ + ++ A VF+ +L G+ P Y L+D +G + A ++K M +
Sbjct: 706 DGFCRSGDISRARNVFDSILAKGLVPNCVTYTALIDGNCKNGDITDAFDLYKEMLDRGIA 765
Query: 339 PDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEI 398
PD Y + + +A+D+E A + G+ NV + TL+ G+ K L++ ++
Sbjct: 766 PDAFVYNVLATGCSDAADLEQALFLTEEMFNRGYA-NVSLFNTLVHGFCKRGKLQETEKL 824
Query: 399 YDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEME 438
M I PN ++ +GK A + E++
Sbjct: 825 LHVMMDREIVPNAQTVEKVVSEFGKAGKLGEAHRVFAELQ 864
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 81/331 (24%), Positives = 143/331 (43%), Gaps = 4/331 (1%)
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
P+ + L +Q+IL + +SP P + +++ YKK G
Sbjct: 132 PQANGLLHQMILAHPHPPLVLASIQRAIQDTDHRSRSP-SPSTAVLDVLVDTYKKTGSVR 190
Query: 222 KARKLFALMAERGVQQSTVTYNSLMS--FETNYKEVS-KIYDQMQRAGLQPDVVSYALLI 278
A ++ +MA+ G+ + N L+ + E+ K+ M+ AG+ PDV +Y+ I
Sbjct: 191 NAAQVVLMMADLGLAPTRRCCNGLLKDLLRADAMELLWKLKGFMEGAGILPDVYTYSTFI 250
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCS 338
A+ KAR + A VFEEM YN+++ SG V++A + M S
Sbjct: 251 EAHCKARDFDAAKKVFEEMRRRDCAMNEVTYNVMISGLCRSGAVEEAFGFKEEMVDYGLS 310
Query: 339 PDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEI 398
PD +Y +++ S ++ A+ + G PN++ YGTL+ G+ K + +I
Sbjct: 311 PDAFTYGALMNGLCKGSRLKEAKALLDEMSCSGLKPNIVVYGTLVDGFMKEGKTAEAFDI 370
Query: 399 YDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKT 458
+M G++PN+ ++ ++ K A KEM G PD N L+
Sbjct: 371 LKEMISAGVQPNKIMYDNLIRGLCKIGQLGRASKLLKEMIKVGLRPDTFTYNPLMQGHFQ 430
Query: 459 ADERNEANELLGNFNHPNNEPGINGLSISVD 489
+++ A ELL + P + I ++
Sbjct: 431 QHDKDGAFELLNEMRNSGILPNVYSYGIMIN 461
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 68/315 (21%), Positives = 136/315 (43%), Gaps = 6/315 (1%)
Query: 158 QSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKA 217
+S P PS +++ + + + A +V + + D L P ++ + ++ +A
Sbjct: 165 RSRSPSPSTAVLDVLVDTYKKTGSVRNAAQVVLMMADLG---LAPTRRCCNGLLKDLLRA 221
Query: 218 GGYEKARKLFALMAERGVQQSTVTYNSLMSFET---NYKEVSKIYDQMQRAGLQPDVVSY 274
E KL M G+ TY++ + ++ K++++M+R + V+Y
Sbjct: 222 DAMELLWKLKGFMEGAGILPDVYTYSTFIEAHCKARDFDAAKKVFEEMRRRDCAMNEVTY 281
Query: 275 ALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRR 334
++I+ ++ EEA EEM+D G+ P Y L++ + +A+ + M
Sbjct: 282 NVMISGLCRSGAVEEAFGFKEEMVDYGLSPDAFTYGALMNGLCKGSRLKEAKALLDEMSC 341
Query: 335 DRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEK 394
P+I Y T++ ++ A + + G PN I Y LI+G K+ L +
Sbjct: 342 SGLKPNIVVYGTLVDGFMKEGKTAEAFDILKEMISAGVQPNKIMYDNLIRGLCKIGQLGR 401
Query: 395 MMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLS 454
++ +M G++P+ + +M + + D D A EM + G P+ + I+++
Sbjct: 402 ASKLLKEMIKVGLRPDTFTYNPLMQGHFQQHDKDGAFELLNEMRNSGILPNVYSYGIMIN 461
Query: 455 LAKTADERNEANELL 469
E EA LL
Sbjct: 462 GLCQNGESKEAGNLL 476
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 37/179 (20%), Positives = 74/179 (41%), Gaps = 37/179 (20%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
LI + + GD ++A V + KG P+ V++TAL++ + G +A +++ M G
Sbjct: 704 LIDGFCRSGDISRARNVFDSILAKGLVPNCVTYTALIDGNCKNGDITDAFDLYKEMLDRG 763
Query: 162 PRPSALTYQII----------------------------------LKLFVEANKFKEAEE 187
P A Y ++ + F + K +E E+
Sbjct: 764 IAPDAFVYNVLATGCSDAADLEQALFLTEEMFNRGYANVSLFNTLVHGFCKRGKLQETEK 823
Query: 188 VFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLM 246
+ ++D E + P+ + ++ + KAG +A ++FA + ++ QS SL+
Sbjct: 824 LLHVMMDRE---IVPNAQTVEKVVSEFGKAGKLGEAHRVFAELQQKKASQSATDRFSLL 879
>gi|297843788|ref|XP_002889775.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297335617|gb|EFH66034.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 598
Score = 164 bits (416), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 107/393 (27%), Positives = 175/393 (44%), Gaps = 39/393 (9%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
LI + + G KA K+L + G P V+++ ++ Y + G NA ++ RM S
Sbjct: 143 LIRGFCRMGKTRKAAKILEVLEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRMSVS- 201
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVF-------------------------------M 190
P +TY IL+ ++ K K+A EV M
Sbjct: 202 --PDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGQAM 259
Query: 191 TLLDEEK-SPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSL---M 246
LLDE + PD +++++ K G ++A K M G Q + +T+N + M
Sbjct: 260 KLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSM 319
Query: 247 SFETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTH 306
+ + K+ M R G P VV++ +LIN + A+ + E+M G +P
Sbjct: 320 CSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPKHGCQPNS 379
Query: 307 KAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRR 366
+YN LL F +D+A + M C PDI +Y TML+A +E A + +
Sbjct: 380 LSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQ 439
Query: 367 LKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKD 426
L G P +ITY T+I G AK K +++ D+MR +KP+ +++++ +
Sbjct: 440 LSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGK 499
Query: 427 FDSAVVWYKEMESCGFPPDQKAKN-ILLSLAKT 458
D A+ ++ E E G P+ N I+L L KT
Sbjct: 500 VDEAIKFFHEFERMGVRPNAVTFNSIMLGLCKT 532
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 91/364 (25%), Positives = 166/364 (45%), Gaps = 6/364 (1%)
Query: 109 QGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALT 168
G +A +VL M ++ P V+++T L+EA R A + M+ G P +T
Sbjct: 217 SGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGQAMKLLDEMRDRGCTPDVVT 276
Query: 169 YQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFA 228
Y +++ + + EA + L D S +P+ ++++ G + A KL A
Sbjct: 277 YNVLVNGICKEGRLDEAIKF---LNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLA 333
Query: 229 LMAERGVQQSTVTYNSLMSFETNYKEVSK---IYDQMQRAGLQPDVVSYALLINAYGKAR 285
M +G S VT+N L++F + + I ++M + G QP+ +SY L++ + K +
Sbjct: 334 DMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPKHGCQPNSLSYNPLLHGFCKEK 393
Query: 286 REEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYT 345
+ + A+ E M+ G P YN +L A G V+ A + + CSP + +Y
Sbjct: 394 KMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYN 453
Query: 346 TMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVN 405
T++ A A K ++ P+ ITY +L+ G ++ +++ ++ + +
Sbjct: 454 TVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERM 513
Query: 406 GIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEA 465
G++PN F +IM K + D A+ + M + G P + + IL+ EA
Sbjct: 514 GVRPNAVTFNSIMLGLCKTRQTDRAIDFLVYMINRGCKPTETSYTILIEGLAYEGMAKEA 573
Query: 466 NELL 469
ELL
Sbjct: 574 LELL 577
Score = 138 bits (348), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 89/384 (23%), Positives = 183/384 (47%), Gaps = 10/384 (2%)
Query: 40 EVGSAVAVLRSERTRGQPLPKDLVLGTLVRLKQLKKWNVVSEVLEWLRIQSWWDFNEMDF 99
E+ +A++VL + + +L +L +LK+ EVL+ + + + + + +
Sbjct: 187 EINNALSVLDRMSVSPDVVTYNTILRSLCDSGKLKQ---AMEVLDRMLQRDCYP-DVITY 242
Query: 100 LMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQS 159
+LI A + +A K+L M +G P VV++ L+ + GR A M S
Sbjct: 243 TILIEATCRDSGVGQAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPS 302
Query: 160 SGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGG 219
SG +P+ +T+ IIL+ ++ +AE++ +L + P F+++I + G
Sbjct: 303 SGCQPNVITHNIILRSMCSTGRWMDAEKLLADML---RKGFSPSVVTFNILINFLCRKGL 359
Query: 220 YEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSKIYDQMQRA---GLQPDVVSYAL 276
+A + M + G Q ++++YN L+ K++ + + ++R G PD+V+Y
Sbjct: 360 LGRAIDILEKMPKHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNT 419
Query: 277 LINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDR 336
++ A K + E+A+ + ++ G P YN ++D A +G +A + MR
Sbjct: 420 MLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKD 479
Query: 337 CSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMM 396
PD +Y++++ ++ A KFF ++ G PN +T+ +++ G K ++ +
Sbjct: 480 LKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGVRPNAVTFNSIMLGLCKTRQTDRAI 539
Query: 397 EIYDKMRVNGIKPNQTIFTTIMDA 420
+ M G KP +T +T +++
Sbjct: 540 DFLVYMINRGCKPTETSYTILIEG 563
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 84/340 (24%), Positives = 152/340 (44%), Gaps = 9/340 (2%)
Query: 143 RGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKP 202
R G + M G P + +++ F K ++A ++ L E S P
Sbjct: 114 RTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRMGKTRKAAKILEVL---EGSGAVP 170
Query: 203 DQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETN---YKEVSKIY 259
D +++MI Y KAG A + M+ V VTYN+++ + K+ ++
Sbjct: 171 DVITYNVMISGYCKAGEINNALSVLDRMS---VSPDVVTYNTILRSLCDSGKLKQAMEVL 227
Query: 260 DQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAIS 319
D+M + PDV++Y +LI A + +A+ + +EM D G P YN+L++
Sbjct: 228 DRMLQRDCYPDVITYTILIEATCRDSGVGQAMKLLDEMRDRGCTPDVVTYNVLVNGICKE 287
Query: 320 GMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITY 379
G +D+A M C P++ ++ +L + + AEK + + GF P+V+T+
Sbjct: 288 GRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTF 347
Query: 380 GTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMES 439
LI + L + ++I +KM +G +PN + ++ + K K D A+ + + M S
Sbjct: 348 NILINFLCRKGLLGRAIDILEKMPKHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVS 407
Query: 440 CGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEP 479
G PD N +L+ + +A E+L + P
Sbjct: 408 RGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSP 447
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 54/233 (23%), Positives = 109/233 (46%), Gaps = 3/233 (1%)
Query: 257 KIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAF 316
K + M G PD++ LI + + + +A + E + +G P YN+++ +
Sbjct: 123 KFLENMVYHGNVPDIIPCTTLIRGFCRMGKTRKAAKILEVLEGSGAVPDVITYNVMISGY 182
Query: 317 AISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNV 376
+G ++ A +V R SPD+ +Y T+L + ++ ++ A + R+ Q P+V
Sbjct: 183 CKAGEINNALSVLD---RMSVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDV 239
Query: 377 ITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKE 436
ITY LI+ + + + + M++ D+MR G P+ + +++ K D A+ + +
Sbjct: 240 ITYTILIEATCRDSGVGQAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLND 299
Query: 437 MESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGINGLSISVD 489
M S G P+ NI+L + +A +LL + P + +I ++
Sbjct: 300 MPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILIN 352
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 101/212 (47%), Gaps = 8/212 (3%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + + L+ + K+ ++A + L M +G P +V++ ++ A + G+ ++A I
Sbjct: 378 NSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEIL 437
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSP-LKPDQKMFHMMIYM 213
++ S G P +TY ++ +A K +A + LLDE ++ LKPD + ++
Sbjct: 438 NQLSSKGCSPVLITYNTVIDGLAKAGKTGKA----IKLLDEMRAKDLKPDTITYSSLVGG 493
Query: 214 YKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSKIYD---QMQRAGLQPD 270
+ G ++A K F GV+ + VT+NS+M ++ + D M G +P
Sbjct: 494 LSREGKVDEAIKFFHEFERMGVRPNAVTFNSIMLGLCKTRQTDRAIDFLVYMINRGCKPT 553
Query: 271 VVSYALLINAYGKARREEEALAVFEEMLDAGV 302
SY +LI +EAL + E+ + G+
Sbjct: 554 ETSYTILIEGLAYEGMAKEALELLNELCNKGL 585
Score = 44.7 bits (104), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 28/122 (22%), Positives = 54/122 (44%), Gaps = 3/122 (2%)
Query: 348 LSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGI 407
L V ++E KF + G VP++I TLI+G+ ++ K +I + + +G
Sbjct: 109 LRQLVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRMGKTRKAAKILEVLEGSGA 168
Query: 408 KPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANE 467
P+ + ++ Y K + ++A+ M PD N +L + + +A E
Sbjct: 169 VPDVITYNVMISGYCKAGEINNALSVLDRMS---VSPDVVTYNTILRSLCDSGKLKQAME 225
Query: 468 LL 469
+L
Sbjct: 226 VL 227
>gi|356556194|ref|XP_003546411.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g18940-like [Glycine max]
Length = 829
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 110/449 (24%), Positives = 205/449 (45%), Gaps = 42/449 (9%)
Query: 71 KQLKKWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPS 130
K + W+ + E+L+ +R + + +E +I+A G++G ++A K L+ + GY P
Sbjct: 262 KMGRSWDRILELLDEMRSKGL-ELDEFTCSTVISACGREGMLDEARKFLAELKFNGYKPG 320
Query: 131 VVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFM 190
V++ ++++ +G+ G Y A +I + M+ + P ++TY + +V A E V
Sbjct: 321 TVTYNSMLQVFGKAGIYTEALSILKEMEDNNCPPDSVTYNELAATYVRAGFLDEGMAVID 380
Query: 191 TLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSF-- 248
T+ + + P+ + +I Y KAG + A +LF+LM + G + TYNS+++
Sbjct: 381 TMTSKG---VMPNAITYTTVIDAYGKAGREDDALRLFSLMKDLGCAPNVYTYNSVLAMLG 437
Query: 249 ------------------------------------ETNYKEVSKIYDQMQRAGLQPDVV 272
E + V+K+ +M+ G +PD
Sbjct: 438 KKSRTEDVIKVLCEMKLNGCAPNRATWNTMLAVCSEEGKHNYVNKVLREMKNCGFEPDKD 497
Query: 273 SYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCM 332
++ LI+AY + E ++ ++ EM+ +G P YN LL+A A G A +V + M
Sbjct: 498 TFNTLISAYARCGSEVDSAKMYGEMVKSGFTPCVTTYNALLNALARRGDWKAAESVIQDM 557
Query: 333 RRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNL 392
R P+ SY+ +L Y A +++G EK + + P+ I TL+ K +L
Sbjct: 558 RTKGFKPNENSYSLLLHCYSKAGNVKGIEKVEKEIYDGHVFPSWILLRTLVLTNHKCRHL 617
Query: 393 EKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNIL 452
M +D+++ G KP+ + +++ + +NK F A + CG P+ N L
Sbjct: 618 RGMERAFDQLQKYGYKPDLVVINSMLSMFARNKMFSKAREMLHFIHECGLQPNLFTYNCL 677
Query: 453 LSLAKTADERNEANELLGNFNHPNNEPGI 481
+ L E +A E+L + EP +
Sbjct: 678 MDLYVREGECWKAEEVLKGIQNSGPEPDV 706
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 101/366 (27%), Positives = 182/366 (49%), Gaps = 10/366 (2%)
Query: 101 MLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSS 160
+++ G++ + A K+ + + Y+ V ++T ++ +Y R G+YK A +F +M+
Sbjct: 185 LMVRILGRESQHSIASKLFDLIPVEKYSLDVRAYTTILHSYARTGKYKRAIDLFGKMKEI 244
Query: 161 GPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSP-LKPDQKMFHMMIYMYKKAGG 219
G P+ +TY ++L ++ K + + + LLDE +S L+ D+ +I + G
Sbjct: 245 GLDPTLVTYNVMLDVY---GKMGRSWDRILELLDEMRSKGLELDEFTCSTVISACGREGM 301
Query: 220 YEKARKLFALMAERGVQQSTVTYNSLMSFETN---YKEVSKIYDQMQRAGLQPDVVSYAL 276
++ARK A + G + TVTYNS++ Y E I +M+ PD V+Y
Sbjct: 302 LDEARKFLAELKFNGYKPGTVTYNSMLQVFGKAGIYTEALSILKEMEDNNCPPDSVTYNE 361
Query: 277 LINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDR 336
L Y +A +E +AV + M GV P Y ++DA+ +G D A +F M+
Sbjct: 362 LAATYVRAGFLDEGMAVIDTMTSKGVMPNAITYTTVIDAYGKAGREDDALRLFSLMKDLG 421
Query: 337 CSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMM 396
C+P++ +Y ++L+ S E K +K +G PN T+ T++ ++ +
Sbjct: 422 CAPNVYTYNSVLAMLGKKSRTEDVIKVLCEMKLNGCAPNRATWNTMLAVCSEEGKHNYVN 481
Query: 397 EIYDKMRVNGIKPNQTIFTTIMDAYGK-NKDFDSAVVWYKEMESCGFPPDQKAKNILL-S 454
++ +M+ G +P++ F T++ AY + + DSA + Y EM GF P N LL +
Sbjct: 482 KVLREMKNCGFEPDKDTFNTLISAYARCGSEVDSAKM-YGEMVKSGFTPCVTTYNALLNA 540
Query: 455 LAKTAD 460
LA+ D
Sbjct: 541 LARRGD 546
Score = 130 bits (326), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 86/374 (22%), Positives = 167/374 (44%), Gaps = 41/374 (10%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + + +I AYGK G + A ++ S M G AP+V ++ +++ G+ R ++ +
Sbjct: 390 NAITYTTVIDAYGKAGREDDALRLFSLMKDLGCAPNVYTYNSVLAMLGKKSRTEDVIKVL 449
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
M+ +G P+ T+ +L + E K +V L + + +PD+ F+ +I Y
Sbjct: 450 CEMKLNGCAPNRATWNTMLAVCSEEGKHNYVNKV---LREMKNCGFEPDKDTFNTLISAY 506
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSLMSF---ETNYKEVSKIYDQMQRAGLQPDV 271
+ G + K++ M + G TYN+L++ ++K + M+ G +P+
Sbjct: 507 ARCGSEVDSAKMYGEMVKSGFTPCVTTYNALLNALARRGDWKAAESVIQDMRTKGFKPNE 566
Query: 272 VSYALLINAYGKARREEEALAVFEEMLDAGVRPT-----------HKA------------ 308
SY+LL++ Y KA + V +E+ D V P+ HK
Sbjct: 567 NSYSLLLHCYSKAGNVKGIEKVEKEIYDGHVFPSWILLRTLVLTNHKCRHLRGMERAFDQ 626
Query: 309 ------------YNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASD 356
N +L FA + M +AR + + P++ +Y ++ YV +
Sbjct: 627 LQKYGYKPDLVVINSMLSMFARNKMFSKAREMLHFIHECGLQPNLFTYNCLMDLYVREGE 686
Query: 357 MEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTT 416
AE+ + ++ G P+V++Y T+IKG+ + +++ + + +M GI+P + T
Sbjct: 687 CWKAEEVLKGIQNSGPEPDVVSYNTVIKGFCRKGLMQEAIGVLSEMTTKGIQPTIVTYNT 746
Query: 417 IMDAYGKNKDFDSA 430
+ Y + FD A
Sbjct: 747 FLSGYAGMELFDEA 760
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 83/355 (23%), Positives = 169/355 (47%), Gaps = 6/355 (1%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
L Y + G ++ V+ M KG P+ +++T +++AYG+ GR +A +F M+ G
Sbjct: 362 LAATYVRAGFLDEGMAVIDTMTSKGVMPNAITYTTVIDAYGKAGREDDALRLFSLMKDLG 421
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
P+ TY +L + K E+V L + + + P++ ++ M+ + + G +
Sbjct: 422 CAPNVYTYNSVLAML---GKKSRTEDVIKVLCEMKLNGCAPNRATWNTMLAVCSEEGKHN 478
Query: 222 KARKLFALMAERGVQQSTVTYNSLMS-FETNYKEV--SKIYDQMQRAGLQPDVVSYALLI 278
K+ M G + T+N+L+S + EV +K+Y +M ++G P V +Y L+
Sbjct: 479 YVNKVLREMKNCGFEPDKDTFNTLISAYARCGSEVDSAKMYGEMVKSGFTPCVTTYNALL 538
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCS 338
NA + + A +V ++M G +P +Y++LL ++ +G V V K +
Sbjct: 539 NALARRGDWKAAESVIQDMRTKGFKPNENSYSLLLHCYSKAGNVKGIEKVEKEIYDGHVF 598
Query: 339 PDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEI 398
P T++ + G E+ F +L++ G+ P+++ +++ +A+ K E+
Sbjct: 599 PSWILLRTLVLTNHKCRHLRGMERAFDQLQKYGYKPDLVVINSMLSMFARNKMFSKAREM 658
Query: 399 YDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILL 453
+ G++PN + +MD Y + + A K +++ G PD + N ++
Sbjct: 659 LHFIHECGLQPNLFTYNCLMDLYVREGECWKAEEVLKGIQNSGPEPDVVSYNTVI 713
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 78/335 (23%), Positives = 153/335 (45%), Gaps = 10/335 (2%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
++ ++G N KVL M G+ P + L+ AY R G ++ ++ M SG
Sbjct: 467 MLAVCSEEGKHNYVNKVLREMKNCGFEPDKDTFNTLISAYARCGSEVDSAKMYGEMVKSG 526
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
P TY +L +K AE V D KP++ + ++++ Y KAG +
Sbjct: 527 FTPCVTTYNALLNALARRGDWKAAESVIQ---DMRTKGFKPNENSYSLLLHCYSKAGNVK 583
Query: 222 KARKLFALMAERGVQQSTVTYNSLMSFETNYK-----EVSKIYDQMQRAGLQPDVVSYAL 276
K+ + + V S + +L+ TN+K + + +DQ+Q+ G +PD+V
Sbjct: 584 GIEKVEKEIYDGHVFPSWILLRTLVL--TNHKCRHLRGMERAFDQLQKYGYKPDLVVINS 641
Query: 277 LINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDR 336
+++ + + + +A + + + G++P YN L+D + G +A V K ++
Sbjct: 642 MLSMFARNKMFSKAREMLHFIHECGLQPNLFTYNCLMDLYVREGECWKAEEVLKGIQNSG 701
Query: 337 CSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMM 396
PD+ SY T++ + M+ A + G P ++TY T + GYA + ++
Sbjct: 702 PEPDVVSYNTVIKGFCRKGLMQEAIGVLSEMTTKGIQPTIVTYNTFLSGYAGMELFDEAN 761
Query: 397 EIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAV 431
E+ M + +P++ + ++D Y K ++ A+
Sbjct: 762 EVIRFMIEHNCRPSELTYKILVDGYCKAGKYEEAM 796
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 75/314 (23%), Positives = 150/314 (47%), Gaps = 7/314 (2%)
Query: 170 QIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFAL 229
++++++ ++ A ++F L+ EK L D + + +++ Y + G Y++A LF
Sbjct: 184 ELMVRILGRESQHSIASKLF-DLIPVEKYSL--DVRAYTTILHSYARTGKYKRAIDLFGK 240
Query: 230 MAERGVQQSTVTYNSLM----SFETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKAR 285
M E G+ + VTYN ++ ++ + ++ D+M+ GL+ D + + +I+A G+
Sbjct: 241 MKEIGLDPTLVTYNVMLDVYGKMGRSWDRILELLDEMRSKGLELDEFTCSTVISACGREG 300
Query: 286 REEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYT 345
+EA E+ G +P YN +L F +G+ +A ++ K M + C PD +Y
Sbjct: 301 MLDEARKFLAELKFNGYKPGTVTYNSMLQVFGKAGIYTEALSILKEMEDNNCPPDSVTYN 360
Query: 346 TMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVN 405
+ + YV A ++ + G +PN ITY T+I Y K + + ++ M+
Sbjct: 361 ELAATYVRAGFLDEGMAVIDTMTSKGVMPNAITYTTVIDAYGKAGREDDALRLFSLMKDL 420
Query: 406 GIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEA 465
G PN + +++ GK + + EM+ G P++ N +L++ + N
Sbjct: 421 GCAPNVYTYNSVLAMLGKKSRTEDVIKVLCEMKLNGCAPNRATWNTMLAVCSEEGKHNYV 480
Query: 466 NELLGNFNHPNNEP 479
N++L + EP
Sbjct: 481 NKVLREMKNCGFEP 494
Score = 65.1 bits (157), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 52/232 (22%), Positives = 107/232 (46%), Gaps = 9/232 (3%)
Query: 254 EVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEML-----DAGVRPTHKA 308
E++ ++ ++ L+ D S L+ A + E AL +FE D +R ++
Sbjct: 126 ELNDFFNSVKFELLEADFPS---LLKALDLSGNWERALLLFEWGWLHFGSDQNLRLDNQV 182
Query: 309 YNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLK 368
+++ A +F + ++ S D+ +YTT+L +Y + A F ++K
Sbjct: 183 VELMVRILGRESQHSIASKLFDLIPVEKYSLDVRAYTTILHSYARTGKYKRAIDLFGKMK 242
Query: 369 QDGFVPNVITYGTLIKGYAKVN-NLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDF 427
+ G P ++TY ++ Y K+ + ++++E+ D+MR G++ ++ +T++ A G+
Sbjct: 243 EIGLDPTLVTYNVMLDVYGKMGRSWDRILELLDEMRSKGLELDEFTCSTVISACGREGML 302
Query: 428 DSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEP 479
D A + E++ G+ P N +L + A EA +L N P
Sbjct: 303 DEARKFLAELKFNGYKPGTVTYNSMLQVFGKAGIYTEALSILKEMEDNNCPP 354
>gi|168026089|ref|XP_001765565.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162683203|gb|EDQ69615.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 505
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 101/374 (27%), Positives = 191/374 (51%), Gaps = 9/374 (2%)
Query: 99 FLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQ 158
F +LI + K +A V M K +P V ++T L+ + G GR +F M
Sbjct: 103 FNILIDSLAKADQVEEACNVFGDMFKLNVSPDVYTYTILIRSLGTIGRIDAVMKLFESMT 162
Query: 159 SSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAG 218
+ G +P+ TY ++ F A + EA ++F ++ + L+PD ++++I + K G
Sbjct: 163 AQGCQPNLFTYHSVMHAFGSAGRVDEACDIFQQMV---QKGLQPDAVTYNILIDAFGKTG 219
Query: 219 GYEKARKLFALMAERGVQQSTVTYNSLMSF---ETNYKEVSKIYDQMQRAGLQPDVVSYA 275
E+A F + + + VTYNSL+S + + + + +++ QM+ GL + ++YA
Sbjct: 220 QLERA---FDFVGKSRSFTNEVTYNSLLSSLGRKGDIQGLMELFGQMKAKGLVSNELTYA 276
Query: 276 LLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRD 335
+LI G A R E+ ++ EM+D ++ N +LD + +G V+ A +F+ M+
Sbjct: 277 ILIERLGWAGRVEDVWQLYLEMVDNDIKYDIVTINNVLDCLSKAGRVEAAFELFQDMKFK 336
Query: 336 RCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKM 395
+ D +Y +++ A ++ A ++++G PN+ITY TLI Y K +NL
Sbjct: 337 GLNADTVTYNILINGLGRAGKLDAAGALLLEMEENGCAPNIITYNTLISSYGKWSNLSAA 396
Query: 396 MEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSL 455
++ +M+ G+ PN ++++++ +GK D+A+ ++EM++ G PP+ N+L+
Sbjct: 397 TRLFLEMKERGVAPNVVSYSSLIEGFGKAGRTDAAISLFREMKAEGCPPNHVTYNLLIDC 456
Query: 456 AKTADERNEANELL 469
A A E L
Sbjct: 457 LIRAGRFGAAMEYL 470
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 88/360 (24%), Positives = 183/360 (50%), Gaps = 9/360 (2%)
Query: 99 FLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQ 158
+ +LI + G G + K+ M +G P++ ++ ++M A+G GR A IF++M
Sbjct: 138 YTILIRSLGTIGRIDAVMKLFESMTAQGCQPNLFTYHSVMHAFGSAGRVDEACDIFQQMV 197
Query: 159 SSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAG 218
G +P A+TY I++ F + + + A + KS ++ ++ ++ + G
Sbjct: 198 QKGLQPDAVTYNILIDAFGKTGQLERAFDFV------GKSRSFTNEVTYNSLLSSLGRKG 251
Query: 219 GYEKARKLFALMAERGVQQSTVTYNSL---MSFETNYKEVSKIYDQMQRAGLQPDVVSYA 275
+ +LF M +G+ + +TY L + + ++V ++Y +M ++ D+V+
Sbjct: 252 DIQGLMELFGQMKAKGLVSNELTYAILIERLGWAGRVEDVWQLYLEMVDNDIKYDIVTIN 311
Query: 276 LLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRD 335
+++ KA R E A +F++M G+ YNIL++ +G +D A + M +
Sbjct: 312 NVLDCLSKAGRVEAAFELFQDMKFKGLNADTVTYNILINGLGRAGKLDAAGALLLEMEEN 371
Query: 336 RCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKM 395
C+P+I +Y T++S+Y S++ A + F +K+ G PNV++Y +LI+G+ K +
Sbjct: 372 GCAPNIITYNTLISSYGKWSNLSAATRLFLEMKERGVAPNVVSYSSLIEGFGKAGRTDAA 431
Query: 396 MEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSL 455
+ ++ +M+ G PN + ++D + F +A+ + +EM G + K++L+ +
Sbjct: 432 ISLFREMKAEGCPPNHVTYNLLIDCLIRAGRFGAAMEYLREMRDAGCQMGKVTKSLLVRI 491
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 96/383 (25%), Positives = 179/383 (46%), Gaps = 9/383 (2%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
++T G ++ ++++ M K L+ YG + A G
Sbjct: 1 MLTLLGAARRYDDVQRLVESMQKDRTKLDTQLFNTLIHIYGEANMMEKALQTLAAFTKEG 60
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
RP+A TY ++++F++ + ++ +L K+ PD F+++I KA E
Sbjct: 61 GRPTAYTYSSMIQVFMKGGDVQNGLLMYKQML---KAKFVPDHTTFNILIDSLAKADQVE 117
Query: 222 KARKLFALMAERGVQQSTVTYNSLM-SFET--NYKEVSKIYDQMQRAGLQPDVVSYALLI 278
+A +F M + V TY L+ S T V K+++ M G QP++ +Y ++
Sbjct: 118 EACNVFGDMFKLNVSPDVYTYTILIRSLGTIGRIDAVMKLFESMTAQGCQPNLFTYHSVM 177
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCS 338
+A+G A R +EA +F++M+ G++P YNIL+DAF +G +++A F + + R
Sbjct: 178 HAFGSAGRVDEACDIFQQMVQKGLQPDAVTYNILIDAFGKTGQLERA---FDFVGKSRSF 234
Query: 339 PDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEI 398
+ +Y ++LS+ D++G + F ++K G V N +TY LI+ +E + ++
Sbjct: 235 TNEVTYNSLLSSLGRKGDIQGLMELFGQMKAKGLVSNELTYAILIERLGWAGRVEDVWQL 294
Query: 399 YDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKT 458
Y +M N IK + ++D K ++A +++M+ G D NIL++
Sbjct: 295 YLEMVDNDIKYDIVTINNVLDCLSKAGRVEAAFELFQDMKFKGLNADTVTYNILINGLGR 354
Query: 459 ADERNEANELLGNFNHPNNEPGI 481
A + + A LL P I
Sbjct: 355 AGKLDAAGALLLEMEENGCAPNI 377
Score = 111 bits (278), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 74/274 (27%), Positives = 134/274 (48%), Gaps = 8/274 (2%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
NE+ + L+++ G++GD ++ M KG + +++ L+E G GR ++ ++
Sbjct: 236 NEVTYNSLLSSLGRKGDIQGLMELFGQMKAKGLVSNELTYAILIERLGWAGRVEDVWQLY 295
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
M + + +T +L +A + + A E+F D + L D ++++I
Sbjct: 296 LEMVDNDIKYDIVTINNVLDCLSKAGRVEAAFELFQ---DMKFKGLNADTVTYNILINGL 352
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFE---TNYKEVSKIYDQMQRAGLQPDV 271
+AG + A L M E G + +TYN+L+S +N ++++ +M+ G+ P+V
Sbjct: 353 GRAGKLDAAGALLLEMEENGCAPNIITYNTLISSYGKWSNLSAATRLFLEMKERGVAPNV 412
Query: 272 VSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKC 331
VSY+ LI +GKA R + A+++F EM G P H YN+L+D +G A +
Sbjct: 413 VSYSSLIEGFGKAGRTDAAISLFREMKAEGCPPNHVTYNLLIDCLIRAGRFGAAMEYLRE 472
Query: 332 MRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFR 365
MR C + T L + ME A+ FF+
Sbjct: 473 MRDAGC--QMGKVTKSLLVRIPPQYMEEAQSFFQ 504
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 80/354 (22%), Positives = 162/354 (45%), Gaps = 40/354 (11%)
Query: 67 LVR-LKQLKKWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKK 125
L+R L + + + V ++ E + Q N + ++ A+G G ++A + M +K
Sbjct: 141 LIRSLGTIGRIDAVMKLFESMTAQGCQP-NLFTYHSVMHAFGSAGRVDEACDIFQQMVQK 199
Query: 126 GYAPSVVSHTALMEAYGRGGRYKNA--------------------------------EAI 153
G P V++ L++A+G+ G+ + A +
Sbjct: 200 GLQPDAVTYNILIDAFGKTGQLERAFDFVGKSRSFTNEVTYNSLLSSLGRKGDIQGLMEL 259
Query: 154 FRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYM 213
F +M++ G + LTY I+++ A + ++ ++++ ++D + +K D + ++
Sbjct: 260 FGQMKAKGLVSNELTYAILIERLGWAGRVEDVWQLYLEMVDND---IKYDIVTINNVLDC 316
Query: 214 YKKAGGYEKARKLFALMAERGVQQSTVTYNSL---MSFETNYKEVSKIYDQMQRAGLQPD 270
KAG E A +LF M +G+ TVTYN L + + +M+ G P+
Sbjct: 317 LSKAGRVEAAFELFQDMKFKGLNADTVTYNILINGLGRAGKLDAAGALLLEMEENGCAPN 376
Query: 271 VVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFK 330
+++Y LI++YGK A +F EM + GV P +Y+ L++ F +G D A ++F+
Sbjct: 377 IITYNTLISSYGKWSNLSAATRLFLEMKERGVAPNVVSYSSLIEGFGKAGRTDAAISLFR 436
Query: 331 CMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIK 384
M+ + C P+ +Y ++ + A A ++ R ++ G +T L++
Sbjct: 437 EMKAEGCPPNHVTYNLLIDCLIRAGRFGAAMEYLREMRDAGCQMGKVTKSLLVR 490
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 61/250 (24%), Positives = 112/250 (44%)
Query: 244 SLMSFETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVR 303
+L+ Y +V ++ + MQ+ + D + LI+ YG+A E+AL G R
Sbjct: 3 TLLGAARRYDDVQRLVESMQKDRTKLDTQLFNTLIHIYGEANMMEKALQTLAAFTKEGGR 62
Query: 304 PTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKF 363
PT Y+ ++ F G V ++K M + + PD ++ ++ + A +E A
Sbjct: 63 PTAYTYSSMIQVFMKGGDVQNGLLMYKQMLKAKFVPDHTTFNILIDSLAKADQVEEACNV 122
Query: 364 FRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGK 423
F + + P+V TY LI+ + ++ +M++++ M G +PN + ++M A+G
Sbjct: 123 FGDMFKLNVSPDVYTYTILIRSLGTIGRIDAVMKLFESMTAQGCQPNLFTYHSVMHAFGS 182
Query: 424 NKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGING 483
D A +++M G PD NIL+ + A + +G NE N
Sbjct: 183 AGRVDEACDIFQQMVQKGLQPDAVTYNILIDAFGKTGQLERAFDFVGKSRSFTNEVTYNS 242
Query: 484 LSISVDEEDD 493
L S+ + D
Sbjct: 243 LLSSLGRKGD 252
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 67/143 (46%), Gaps = 2/143 (1%)
Query: 347 MLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNG 406
ML+ A + ++ +++D + + TLI Y + N +EK ++ G
Sbjct: 1 MLTLLGAARRYDDVQRLVESMQKDRTKLDTQLFNTLIHIYGEANMMEKALQTLAAFTKEG 60
Query: 407 IKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILL-SLAKTADERNEA 465
+P +++++ + K D + ++ YK+M F PD NIL+ SLAK AD+ EA
Sbjct: 61 GRPTAYTYSSMIQVFMKGGDVQNGLLMYKQMLKAKFVPDHTTFNILIDSLAK-ADQVEEA 119
Query: 466 NELLGNFNHPNNEPGINGLSISV 488
+ G+ N P + +I +
Sbjct: 120 CNVFGDMFKLNVSPDVYTYTILI 142
>gi|162462150|ref|NP_001105879.1| chloroplast RNA processing1 [Zea mays]
gi|3289002|gb|AAC25599.1| CRP1 [Zea mays]
Length = 668
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 95/356 (26%), Positives = 181/356 (50%), Gaps = 6/356 (1%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
L+ Y + G AE+VL M++ G AP +++ L++AY R GR+++A + + M++ G
Sbjct: 305 LLKGYVRIGSLKNAEQVLDEMSQCGVAPDEATYSLLVDAYTRAGRWESARILLKEMEADG 364
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
+PS+ + IL F + +++A F L + + S ++PD+ +++MI + K
Sbjct: 365 VKPSSYVFSRILAGFRDRGDWQKA---FAVLREMQASGVRPDRHFYNVMIDTFGKYNCLG 421
Query: 222 KARKLFALMAERGVQQSTVTYNSLMSFETN---YKEVSKIYDQMQRAGLQPDVVSYALLI 278
A F M E G++ VT+N+L+ + ++++++M+ + P +Y ++I
Sbjct: 422 HAMDAFNKMREEGIEPDVVTWNTLIDAHCKGGRHDRAAELFEEMRESNCPPGTTTYNIMI 481
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCS 338
N G+ E A+ EM + G+ P Y L+D + SG +A + M+ D
Sbjct: 482 NLLGEQEHWEGVEAMLSEMKEQGLVPNIITYTTLVDVYGRSGRYKEAIDCIEAMKADGLK 541
Query: 339 PDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEI 398
P Y +++AY + A + +K DG +++ +LI + + + + +
Sbjct: 542 PSPTMYHALVNAYAQRGLADHALNVVKAMKADGLEVSILVLNSLINAFGEDRRVVEAFSV 601
Query: 399 YDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLS 454
MR NG++P+ +TT+M A + + FD V Y+EM + G PD+KA+ +L S
Sbjct: 602 LQFMRENGLRPDVITYTTLMKALIRVEQFDKVPVIYEEMITSGCAPDRKARAMLRS 657
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 98/346 (28%), Positives = 177/346 (51%), Gaps = 9/346 (2%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
LI+A+ + + A ++L+ G P + TAL+ A G GR AEA+F +G
Sbjct: 234 LISAFARAALPDAALELLASAQAIGLTPRSNAVTALISALGTAGRVAEAEALFLEFFLAG 293
Query: 162 P-RPSALTYQIILKLFVEANKFKEAEEVFMTLLDE-EKSPLKPDQKMFHMMIYMYKKAGG 219
+P Y +LK +V K AE+V LDE + + PD+ + +++ Y +AG
Sbjct: 294 EIKPRTRAYNALLKGYVRIGSLKNAEQV----LDEMSQCGVAPDEATYSLLVDAYTRAGR 349
Query: 220 YEKARKLFALMAERGVQQSTVTYNSLMSF---ETNYKEVSKIYDQMQRAGLQPDVVSYAL 276
+E AR L M GV+ S+ ++ +++ ++++ + +MQ +G++PD Y +
Sbjct: 350 WESARILLKEMEADGVKPSSYVFSRILAGFRDRGDWQKAFAVLREMQASGVRPDRHFYNV 409
Query: 277 LINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDR 336
+I+ +GK A+ F +M + G+ P +N L+DA G D+A +F+ MR
Sbjct: 410 MIDTFGKYNCLGHAMDAFNKMREEGIEPDVVTWNTLIDAHCKGGRHDRAAELFEEMRESN 469
Query: 337 CSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMM 396
C P +Y M++ EG E +K+ G VPN+ITY TL+ Y + ++ +
Sbjct: 470 CPPGTTTYNIMINLLGEQEHWEGVEAMLSEMKEQGLVPNIITYTTLVDVYGRSGRYKEAI 529
Query: 397 EIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGF 442
+ + M+ +G+KP+ T++ +++AY + D A+ K M++ G
Sbjct: 530 DCIEAMKADGLKPSPTMYHALVNAYAQRGLADHALNVVKAMKADGL 575
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 88/320 (27%), Positives = 169/320 (52%), Gaps = 6/320 (1%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
+E + +L+ AY + G + A +L M G PS + ++ + G ++ A A+
Sbjct: 333 DEATYSLLVDAYTRAGRWESARILLKEMEADGVKPSSYVFSRILAGFRDRGDWQKAFAVL 392
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
R MQ+SG RP Y +++ F + N A + F + +E ++PD ++ +I +
Sbjct: 393 REMQASGVRPDRHFYNVMIDTFGKYNCLGHAMDAFNKMREEG---IEPDVVTWNTLIDAH 449
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYN---SLMSFETNYKEVSKIYDQMQRAGLQPDV 271
K G +++A +LF M E T TYN +L+ + +++ V + +M+ GL P++
Sbjct: 450 CKGGRHDRAAELFEEMRESNCPPGTTTYNIMINLLGEQEHWEGVEAMLSEMKEQGLVPNI 509
Query: 272 VSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKC 331
++Y L++ YG++ R +EA+ E M G++P+ Y+ L++A+A G+ D A V K
Sbjct: 510 ITYTTLVDVYGRSGRYKEAIDCIEAMKADGLKPSPTMYHALVNAYAQRGLADHALNVVKA 569
Query: 332 MRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNN 391
M+ D I ++++A+ + A + ++++G P+VITY TL+K +V
Sbjct: 570 MKADGLEVSILVLNSLINAFGEDRRVVEAFSVLQFMRENGLRPDVITYTTLMKALIRVEQ 629
Query: 392 LEKMMEIYDKMRVNGIKPNQ 411
+K+ IY++M +G P++
Sbjct: 630 FDKVPVIYEEMITSGCAPDR 649
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 75/296 (25%), Positives = 135/296 (45%), Gaps = 4/296 (1%)
Query: 164 PSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKA 223
P +Y +L + +A + L D +S L+PD +F +I + +A + A
Sbjct: 188 PDLASYSHLLASLLNTRDPPDAALLERLLGDLRESRLEPDAPLFSDLISAFARAALPDAA 247
Query: 224 RKLFALMAERGVQQSTVTYNSLMS---FETNYKEVSKIYDQMQRAG-LQPDVVSYALLIN 279
+L A G+ + +L+S E ++ + AG ++P +Y L+
Sbjct: 248 LELLASAQAIGLTPRSNAVTALISALGTAGRVAEAEALFLEFFLAGEIKPRTRAYNALLK 307
Query: 280 AYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSP 339
Y + + A V +EM GV P Y++L+DA+ +G + AR + K M D P
Sbjct: 308 GYVRIGSLKNAEQVLDEMSQCGVAPDEATYSLLVDAYTRAGRWESARILLKEMEADGVKP 367
Query: 340 DICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIY 399
++ +L+ + + D + A R ++ G P+ Y +I + K N L M+ +
Sbjct: 368 SSYVFSRILAGFRDRGDWQKAFAVLREMQASGVRPDRHFYNVMIDTFGKYNCLGHAMDAF 427
Query: 400 DKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSL 455
+KMR GI+P+ + T++DA+ K D A ++EM PP NI+++L
Sbjct: 428 NKMREEGIEPDVVTWNTLIDAHCKGGRHDRAAELFEEMRESNCPPGTTTYNIMINL 483
>gi|326508346|dbj|BAJ99440.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 819
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 98/406 (24%), Positives = 189/406 (46%), Gaps = 17/406 (4%)
Query: 92 WDFNEMDFLM-------------LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALM 138
W N MD ++ ++ A G G++ KA ++ M + G P +V+H ++
Sbjct: 206 WAINIMDDMLRAAIPPSRATYNNVVNACGAAGNWKKALELCKKMIRNGVGPDLVTHNIVL 265
Query: 139 EAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKS 198
A+ G +Y A F M+ + P T I++ V+ + +A ++ ++ E++
Sbjct: 266 SAFKNGFQYTKATGYFEMMKGANIAPDTFTLNIVIHCLVKVGQHGDAVDLLNSM-REKRV 324
Query: 199 PLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNY---KEV 255
PD + +I+ Y G E + +F +M GV+ + V+YN+L+ ++ E
Sbjct: 325 QCSPDVVTYTSIIHSYYVCGQVENCKAVFDMMVAEGVKPNIVSYNALLGAYASHGMHTEA 384
Query: 256 SKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDA 315
I+ +++ GL+PDVVSY L+NAYG++ + E+A VF EM +P +YN L+DA
Sbjct: 385 FGIFKLLKQNGLRPDVVSYTTLLNAYGRSAQPEKAREVFNEMRKNSCKPNKVSYNALIDA 444
Query: 316 FAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPN 375
+ +GM +A ++ M +D PD+ S +T+L+A + K G N
Sbjct: 445 YGSAGMFKEAISLLHEMEKDGIPPDVVSISTLLAACGRCRQTTKIDTVLEAAKFRGIELN 504
Query: 376 VITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYK 435
++ Y + I Y + EK +++Y M + + P+ + ++ K + ++ +++
Sbjct: 505 IVAYNSGIGSYLSFGDYEKALKLYATMMASNVNPDAVTYNILISGLCKLGKYAESLKFFE 564
Query: 436 EMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGI 481
+M P ++ + L+ D+ EA N P +
Sbjct: 565 DMVDLRIPLTKEVYSSLICSYVKQDKLAEAESTFINMKASGCFPDV 610
Score = 151 bits (382), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 95/358 (26%), Positives = 174/358 (48%), Gaps = 8/358 (2%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
LI A+ + G + A ++ M + PS ++ ++ A G G +K A + ++M +G
Sbjct: 194 LINAHARAGLWRWAINIMDDMLRAAIPPSRATYNNVVNACGAAGNWKKALELCKKMIRNG 253
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
P +T+ I+L F ++ +A F + + + + PD +++I+ K G +
Sbjct: 254 VGPDLVTHNIVLSAFKNGFQYTKATGYFEMM---KGANIAPDTFTLNIVIHCLVKVGQHG 310
Query: 222 KARKLFALMAERGVQQS--TVTYNSLMSFETNYKEVSK---IYDQMQRAGLQPDVVSYAL 276
A L M E+ VQ S VTY S++ +V ++D M G++P++VSY
Sbjct: 311 DAVDLLNSMREKRVQCSPDVVTYTSIIHSYYVCGQVENCKAVFDMMVAEGVKPNIVSYNA 370
Query: 277 LINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDR 336
L+ AY EA +F+ + G+RP +Y LL+A+ S ++AR VF MR++
Sbjct: 371 LLGAYASHGMHTEAFGIFKLLKQNGLRPDVVSYTTLLNAYGRSAQPEKAREVFNEMRKNS 430
Query: 337 CSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMM 396
C P+ SY ++ AY +A + A +++DG P+V++ TL+ + K+
Sbjct: 431 CKPNKVSYNALIDAYGSAGMFKEAISLLHEMEKDGIPPDVVSISTLLAACGRCRQTTKID 490
Query: 397 EIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLS 454
+ + + GI+ N + + + +Y D++ A+ Y M + PD NIL+S
Sbjct: 491 TVLEAAKFRGIELNIVAYNSGIGSYLSFGDYEKALKLYATMMASNVNPDAVTYNILIS 548
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 87/341 (25%), Positives = 167/341 (48%), Gaps = 10/341 (2%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + + L+ AY G +A + + + G P VVS+T L+ AYGR + + A +F
Sbjct: 364 NIVSYNALLGAYASHGMHTEAFGIFKLLKQNGLRPDVVSYTTLLNAYGRSAQPEKAREVF 423
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDE-EKSPLKPDQKMFHMMIYM 213
M+ + +P+ ++Y ++ + A FKEA ++LL E EK + PD ++
Sbjct: 424 NEMRKNSCKPNKVSYNALIDAYGSAGMFKEA----ISLLHEMEKDGIPPDVVSISTLLAA 479
Query: 214 YKKAGGYEKARKLFALMAERGVQQSTVTYNS----LMSFETNYKEVSKIYDQMQRAGLQP 269
+ K + RG++ + V YNS +SF +Y++ K+Y M + + P
Sbjct: 480 CGRCRQTTKIDTVLEAAKFRGIELNIVAYNSGIGSYLSF-GDYEKALKLYATMMASNVNP 538
Query: 270 DVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVF 329
D V+Y +LI+ K + E+L FE+M+D + T + Y+ L+ ++ + +A + F
Sbjct: 539 DAVTYNILISGLCKLGKYAESLKFFEDMVDLRIPLTKEVYSSLICSYVKQDKLAEAESTF 598
Query: 330 KCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKV 389
M+ C PD+ +YT M+ AY + F+ ++ + +P+ I +L++ K
Sbjct: 599 INMKASGCFPDVLTYTAMIQAYTDHGSWTSVWDLFKEMEGNAILPDAIICSSLMEALNKG 658
Query: 390 NNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSA 430
N +++++ M I+ NQ + I+ + +D+ +A
Sbjct: 659 NQYGRVLQLMKFMHDQCIQLNQKAYFEIIASCSMLRDWKTA 699
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 90/376 (23%), Positives = 182/376 (48%), Gaps = 6/376 (1%)
Query: 97 MDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRR 156
+ + +I +Y G + V M +G P++VS+ AL+ AY G + A IF+
Sbjct: 331 VTYTSIIHSYYVCGQVENCKAVFDMMVAEGVKPNIVSYNALLGAYASHGMHTEAFGIFKL 390
Query: 157 MQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKK 216
++ +G RP ++Y +L + + + ++A EVF + K+ KP++ ++ +I Y
Sbjct: 391 LKQNGLRPDVVSYTTLLNAYGRSAQPEKAREVFNEM---RKNSCKPNKVSYNALIDAYGS 447
Query: 217 AGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSKIYDQMQRA---GLQPDVVS 273
AG +++A L M + G+ V+ ++L++ ++ +KI ++ A G++ ++V+
Sbjct: 448 AGMFKEAISLLHEMEKDGIPPDVVSISTLLAACGRCRQTTKIDTVLEAAKFRGIELNIVA 507
Query: 274 YALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMR 333
Y I +Y E+AL ++ M+ + V P YNIL+ G ++ F+ M
Sbjct: 508 YNSGIGSYLSFGDYEKALKLYATMMASNVNPDAVTYNILISGLCKLGKYAESLKFFEDMV 567
Query: 334 RDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLE 393
R Y++++ +YV + AE F +K G P+V+TY +I+ Y +
Sbjct: 568 DLRIPLTKEVYSSLICSYVKQDKLAEAESTFINMKASGCFPDVLTYTAMIQAYTDHGSWT 627
Query: 394 KMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILL 453
+ +++ +M N I P+ I +++M+A K + + K M +QKA ++
Sbjct: 628 SVWDLFKEMEGNAILPDAIICSSLMEALNKGNQYGRVLQLMKFMHDQCIQLNQKAYFEII 687
Query: 454 SLAKTADERNEANELL 469
+ + A+E++
Sbjct: 688 ASCSMLRDWKTASEII 703
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 87/349 (24%), Positives = 167/349 (47%), Gaps = 8/349 (2%)
Query: 82 VLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAY 141
V W++ Q + + M+I + + ++A + M + P + +L+ A+
Sbjct: 139 VFCWMKNQENYCARNDIYGMMIQLHARHNQVDQARGLFFEMQEWRCKPDADIYNSLINAH 198
Query: 142 GRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLK 201
R G ++ A I M + PS TY ++ A +K+A E+ ++ ++ +
Sbjct: 199 ARAGLWRWAINIMDDMLRAAIPPSRATYNNVVNACGAAGNWKKALELCKKMI---RNGVG 255
Query: 202 PDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSKIYDQ 261
PD ++++ +K Y KA F +M + T T N ++ + D
Sbjct: 256 PDLVTHNIVLSAFKNGFQYTKATGYFEMMKGANIAPDTFTLNIVIHCLVKVGQHGDAVDL 315
Query: 262 M-----QRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAF 316
+ +R PDVV+Y +I++Y + E AVF+ M+ GV+P +YN LL A+
Sbjct: 316 LNSMREKRVQCSPDVVTYTSIIHSYYVCGQVENCKAVFDMMVAEGVKPNIVSYNALLGAY 375
Query: 317 AISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNV 376
A GM +A +FK ++++ PD+ SYTT+L+AY ++ E A + F ++++ PN
Sbjct: 376 ASHGMHTEAFGIFKLLKQNGLRPDVVSYTTLLNAYGRSAQPEKAREVFNEMRKNSCKPNK 435
Query: 377 ITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNK 425
++Y LI Y ++ + + +M +GI P+ +T++ A G+ +
Sbjct: 436 VSYNALIDAYGSAGMFKEAISLLHEMEKDGIPPDVVSISTLLAACGRCR 484
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 83/341 (24%), Positives = 157/341 (46%), Gaps = 43/341 (12%)
Query: 169 YQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFA 228
Y ++++L N+ +A +F + ++ KPD +++ +I + +AG + A +
Sbjct: 156 YGMMIQLHARHNQVDQARGLFFEM---QEWRCKPDADIYNSLINAHARAGLWRWAINIMD 212
Query: 229 LMAERGVQQSTVTYNSLMSF---ETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKAR 285
M + S TYN++++ N+K+ ++ +M R G+ PD+V++ ++++A+
Sbjct: 213 DMLRAAIPPSRATYNNVVNACGAAGNWKKALELCKKMIRNGVGPDLVTHNIVLSAFKNGF 272
Query: 286 REEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDR--CSPDICS 343
+ +A FE M A + P NI++ G A + MR R CSPD+ +
Sbjct: 273 QYTKATGYFEMMKGANIAPDTFTLNIVIHCLVKVGQHGDAVDLLNSMREKRVQCSPDVVT 332
Query: 344 YTTMLSAYVNASDMEGAEK-----------------------------------FFRRLK 368
YT+++ +Y +E + F+ LK
Sbjct: 333 YTSIIHSYYVCGQVENCKAVFDMMVAEGVKPNIVSYNALLGAYASHGMHTEAFGIFKLLK 392
Query: 369 QDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFD 428
Q+G P+V++Y TL+ Y + EK E++++MR N KPN+ + ++DAYG F
Sbjct: 393 QNGLRPDVVSYTTLLNAYGRSAQPEKAREVFNEMRKNSCKPNKVSYNALIDAYGSAGMFK 452
Query: 429 SAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELL 469
A+ EME G PPD + + LL+ + + + +L
Sbjct: 453 EAISLLHEMEKDGIPPDVVSISTLLAACGRCRQTTKIDTVL 493
Score = 58.5 bits (140), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 77/386 (19%), Positives = 146/386 (37%), Gaps = 56/386 (14%)
Query: 11 QKRRKVEVFKDAADEAGKKNWRRLMNQIEEVGSA------VAVLRSERTRGQPLPKDLVL 64
Q + EVF + + K N I+ GSA +++L G P P + +
Sbjct: 415 QPEKAREVFNEMRKNSCKPNKVSYNALIDAYGSAGMFKEAISLLHEMEKDGIP-PDVVSI 473
Query: 65 GTLV----RLKQLKKWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLS 120
TL+ R +Q K + V E ++ I+ N + + I +Y GD+ KA K+ +
Sbjct: 474 STLLAACGRCRQTTKIDTVLEAAKFRGIE----LNIVAYNSGIGSYLSFGDYEKALKLYA 529
Query: 121 FMNKKGYAPSVVSHTALMEAYGRGGRYKN------------------------------- 149
M P V++ L+ + G+Y
Sbjct: 530 TMMASNVNPDAVTYNILISGLCKLGKYAESLKFFEDMVDLRIPLTKEVYSSLICSYVKQD 589
Query: 150 ----AEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQK 205
AE+ F M++SG P LTY +++ + + + ++F + E + + PD
Sbjct: 590 KLAEAESTFINMKASGCFPDVLTYTAMIQAYTDHGSWTSVWDLFKEM---EGNAILPDAI 646
Query: 206 MFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLM---SFETNYKEVSKIYDQM 262
+ ++ K Y + +L M ++ +Q + Y ++ S ++K S+I + +
Sbjct: 647 ICSSLMEALNKGNQYGRVLQLMKFMHDQCIQLNQKAYFEIIASCSMLRDWKTASEIIEHL 706
Query: 263 QRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMV 322
+ V L+N GK + E + +F +M+ + Y +LL G
Sbjct: 707 DSSLPSISVGKLNYLLNFLGKCGKTESMMKLFYKMVSSCSTVGLSTYKVLLRNLLAVGKW 766
Query: 323 DQARTVFKCMRRDRCSPDICSYTTML 348
+ V + M P + Y +L
Sbjct: 767 RKYVEVLQWMEDAGVRPTLYMYQNVL 792
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/190 (22%), Positives = 79/190 (41%), Gaps = 7/190 (3%)
Query: 303 RPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICS----YTTMLSAYVNASDME 358
R + + +L+ A SG ++ A VF M+ + C+ Y M+ + + ++
Sbjct: 114 RFARRNFPLLIREMAFSGSLEHAVYVFCWMKNQE---NYCARNDIYGMMIQLHARHNQVD 170
Query: 359 GAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIM 418
A F +++ P+ Y +LI +A+ + I D M I P++ + ++
Sbjct: 171 QARGLFFEMQEWRCKPDADIYNSLINAHARAGLWRWAINIMDDMLRAAIPPSRATYNNVV 230
Query: 419 DAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNE 478
+A G ++ A+ K+M G PD NI+LS K + +A N
Sbjct: 231 NACGAAGNWKKALELCKKMIRNGVGPDLVTHNIVLSAFKNGFQYTKATGYFEMMKGANIA 290
Query: 479 PGINGLSISV 488
P L+I +
Sbjct: 291 PDTFTLNIVI 300
>gi|302759535|ref|XP_002963190.1| hypothetical protein SELMODRAFT_79513 [Selaginella moellendorffii]
gi|300168458|gb|EFJ35061.1| hypothetical protein SELMODRAFT_79513 [Selaginella moellendorffii]
Length = 573
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 109/406 (26%), Positives = 194/406 (47%), Gaps = 7/406 (1%)
Query: 81 EVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFM-NKKGYAPSVVSHTALME 139
EVL+ +R + + + +I + KQG+ ++A ++L M + G AP VV++T++++
Sbjct: 62 EVLKEMRDGKSVAPDLVTYSTVINGFCKQGEMDRACEILREMVTRDGIAPDVVTYTSVVD 121
Query: 140 AYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSP 199
R G+ A + R M+ G P T+ ++ + A K EA +++ +L S
Sbjct: 122 GLCRDGKMDRACEMVREMKLKGVEPDKFTFSALITGWCNARKVDEALKLYKEILTS--SS 179
Query: 200 LKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSKIY 259
KPD + +I + K+G EKA K+ +M R + VTY+SL+ ++ +
Sbjct: 180 WKPDVVTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLDQAL 239
Query: 260 D---QMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAF 316
D +M G P+VV+Y LI+ A + + A + +EM P +YN LLD +
Sbjct: 240 DLFRRMTSKGCVPNVVTYTTLIHGLCAAHKVDAARLLMDEMTATCCPPDTVSYNALLDGY 299
Query: 317 AISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQD-GFVPN 375
G +++A+ +FK M C PD +YT ++ + NAS +E A +K G P+
Sbjct: 300 CRLGRIEEAKQLFKEMATKSCLPDRITYTCLVRGFCNASRLEEARFLLENMKTAAGIDPD 359
Query: 376 VITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYK 435
V+TY ++ GY++ + E +M + PN +++++D K D A+ K
Sbjct: 360 VVTYSIVVAGYSRAKRFVEAAEFIQEMIARNVAPNAVTYSSLIDGLCKAGRVDHAMEVLK 419
Query: 436 EMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGI 481
M + P N ++ + +EA +LL EPG+
Sbjct: 420 NMVNKRVEPSVGTFNSVIGALCRLGDMDEAWKLLVAMAAHGLEPGM 465
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 100/364 (27%), Positives = 178/364 (48%), Gaps = 18/364 (4%)
Query: 89 QSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYK 148
S W + + + LI + K G+ KA K+L M + P+VV++++L+ + G
Sbjct: 177 SSSWKPDVVTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLD 236
Query: 149 NAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDE-EKSPLKPDQKMF 207
A +FRRM S G P+ +TY ++ A+K A L+DE + PD +
Sbjct: 237 QALDLFRRMTSKGCVPNVVTYTTLIHGLCAAHKVDAAR----LLMDEMTATCCPPDTVSY 292
Query: 208 HMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETN---YKEVSKIYDQMQR 264
+ ++ Y + G E+A++LF MA + +TY L+ N +E + + M+
Sbjct: 293 NALLDGYCRLGRIEEAKQLFKEMATKSCLPDRITYTCLVRGFCNASRLEEARFLLENMKT 352
Query: 265 A-GLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVD 323
A G+ PDVV+Y++++ Y +A+R EA +EM+ V P Y+ L+D +G VD
Sbjct: 353 AAGIDPDVVTYSIVVAGYSRAKRFVEAAEFIQEMIARNVAPNAVTYSSLIDGLCKAGRVD 412
Query: 324 QARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLI 383
A V K M R P + ++ +++ A DM+ A K + G P ++TY TL+
Sbjct: 413 HAMEVLKNMVNKRVEPSVGTFNSVIGALCRLGDMDEAWKLLVAMAAHGLEPGMVTYTTLL 472
Query: 384 KGYAKVNNLEKMMEIYDKMR--------VNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYK 435
+G+++ +E E+++ MR + P Q F+ ++ K ++ D A+ +
Sbjct: 473 EGFSRTGRMEIAYELFEVMRKKAKKSSSAANLVPEQA-FSALIRGLCKAREIDKAMAVVE 531
Query: 436 EMES 439
E+ S
Sbjct: 532 ELRS 535
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 95/366 (25%), Positives = 176/366 (48%), Gaps = 9/366 (2%)
Query: 129 PSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEV 188
P+VV+ T +++ + + + K A A F +M+ P+ TY +++ +A +A EV
Sbjct: 5 PTVVTWTIIIDGFCKANQLKQALACFEKMREF-VAPNERTYNVVVNGLCKARLTSKAYEV 63
Query: 189 FMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAER-GVQQSTVTYNSL-- 245
+ D + + PD + +I + K G ++A ++ M R G+ VTY S+
Sbjct: 64 LKEMRDGKS--VAPDLVTYSTVINGFCKQGEMDRACEILREMVTRDGIAPDVVTYTSVVD 121
Query: 246 -MSFETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGV-R 303
+ + ++ +M+ G++PD +++ LI + AR+ +EAL +++E+L + +
Sbjct: 122 GLCRDGKMDRACEMVREMKLKGVEPDKFTFSALITGWCNARKVDEALKLYKEILTSSSWK 181
Query: 304 PTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKF 363
P Y L+D F SG +++A + M +C P++ +Y+++L A D++ A
Sbjct: 182 PDVVTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLDQALDL 241
Query: 364 FRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGK 423
FRR+ G VPNV+TY TLI G + ++ + D+M P+ + ++D Y +
Sbjct: 242 FRRMTSKGCVPNVVTYTTLIHGLCAAHKVDAARLLMDEMTATCCPPDTVSYNALLDGYCR 301
Query: 424 NKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNN-EPGIN 482
+ A +KEM + PD+ L+ A EA LL N +P +
Sbjct: 302 LGRIEEAKQLFKEMATKSCLPDRITYTCLVRGFCNASRLEEARFLLENMKTAAGIDPDVV 361
Query: 483 GLSISV 488
SI V
Sbjct: 362 TYSIVV 367
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 118/217 (54%), Gaps = 4/217 (1%)
Query: 268 QPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQART 327
QP VV++ ++I+ + KA + ++ALA FE+M + V P + YN++++ + + +A
Sbjct: 4 QPTVVTWTIIIDGFCKANQLKQALACFEKMREF-VAPNERTYNVVVNGLCKARLTSKAYE 62
Query: 328 VFKCMRRDR-CSPDICSYTTMLSAYVNASDMEGAEKFFRRL-KQDGFVPNVITYGTLIKG 385
V K MR + +PD+ +Y+T+++ + +M+ A + R + +DG P+V+TY +++ G
Sbjct: 63 VLKEMRDGKSVAPDLVTYSTVINGFCKQGEMDRACEILREMVTRDGIAPDVVTYTSVVDG 122
Query: 386 YAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKE-MESCGFPP 444
+ +++ E+ +M++ G++P++ F+ ++ + + D A+ YKE + S + P
Sbjct: 123 LCRDGKMDRACEMVREMKLKGVEPDKFTFSALITGWCNARKVDEALKLYKEILTSSSWKP 182
Query: 445 DQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGI 481
D L+ + +A ++LG P +
Sbjct: 183 DVVTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNV 219
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/283 (22%), Positives = 123/283 (43%), Gaps = 16/283 (5%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSS- 160
L+ Y + G +A+++ M K P +++T L+ + R + A + M+++
Sbjct: 295 LLDGYCRLGRIEEAKQLFKEMATKSCLPDRITYTCLVRGFCNASRLEEARFLLENMKTAA 354
Query: 161 GPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGY 220
G P +TY I++ + A +F EA E ++ + P+ + +I KAG
Sbjct: 355 GIDPDVVTYSIVVAGYSRAKRFVEAAEFIQEMIARN---VAPNAVTYSSLIDGLCKAGRV 411
Query: 221 EKARKLFALMAERGVQQSTVTYNSLMSFET---NYKEVSKIYDQMQRAGLQPDVVSYALL 277
+ A ++ M + V+ S T+NS++ + E K+ M GL+P +V+Y L
Sbjct: 412 DHAMEVLKNMVNKRVEPSVGTFNSVIGALCRLGDMDEAWKLLVAMAAHGLEPGMVTYTTL 471
Query: 278 INAYGKARREEEALAVFEEM--------LDAGVRPTHKAYNILLDAFAISGMVDQARTVF 329
+ + + R E A +FE M A + P +A++ L+ + +D+A V
Sbjct: 472 LEGFSRTGRMEIAYELFEVMRKKAKKSSSAANLVP-EQAFSALIRGLCKAREIDKAMAVV 530
Query: 330 KCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGF 372
+ +R C P ++ + A E A K + + G
Sbjct: 531 EELRSRECEPAEEDCLAIVDGLLRAGRTEEAGKLINSISKVGL 573
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/244 (18%), Positives = 105/244 (43%), Gaps = 28/244 (11%)
Query: 82 VLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAY 141
+LE ++ + D + + + +++ Y + F +A + + M + AP+ V++++L++
Sbjct: 346 LLENMKTAAGIDPDVVTYSIVVAGYSRAKRFVEAAEFIQEMIARNVAPNAVTYSSLIDGL 405
Query: 142 GRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLK 201
+ GR +A + + M + PS T+ ++ EA ++ + + L+
Sbjct: 406 CKAGRVDHAMEVLKNMVNKRVEPSVGTFNSVIGALCRLGDMDEAWKLLVAM---AAHGLE 462
Query: 202 PDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSKIYDQ 261
P + ++ + + G E A +LF +M R + + + +L+ +
Sbjct: 463 PGMVTYTTLLEGFSRTGRMEIAYELFEVM--RKKAKKSSSAANLVPEQ------------ 508
Query: 262 MQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGM 321
+++ LI KAR ++A+AV EE+ P + ++D +G
Sbjct: 509 -----------AFSALIRGLCKAREIDKAMAVVEELRSRECEPAEEDCLAIVDGLLRAGR 557
Query: 322 VDQA 325
++A
Sbjct: 558 TEEA 561
>gi|291622145|emb|CBJ23782.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
thaliana]
Length = 630
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 113/474 (23%), Positives = 218/474 (45%), Gaps = 38/474 (8%)
Query: 44 AVAVLRSERTRGQPLPKDLVLGTLVR-LKQLKKWNVVSEVLEWLRIQSWWDFNEMDFLML 102
AVA L E + +P P + L+ + ++ K++VV + E ++ N + +L
Sbjct: 65 AVA-LFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQ-NLGIPHNHYTYSIL 122
Query: 103 ITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGP 162
+ + ++ A VL M K GY P +V+ ++L+ Y G R A A+ +M G
Sbjct: 123 LNCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMVEMGY 182
Query: 163 RPSALTYQIILKLFVEANKFKEAEEVF-------------------------------MT 191
+P +T+ ++ NK EA + ++
Sbjct: 183 KPDTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALS 242
Query: 192 LLDE-EKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFET 250
LL + EK ++ + +++ +I K + A LF M +G++ TYNSL+S
Sbjct: 243 LLKKMEKGKIEANVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNSLISCLC 302
Query: 251 NY---KEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHK 307
NY + S++ M + P+VV++ LI+A+ K + EA +F+EM+ + P
Sbjct: 303 NYGRWSDASRLLSDMIERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIV 362
Query: 308 AYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRL 367
YN L++ F + +D+A+ +F M C PD+ +Y T++ + A +E + FR +
Sbjct: 363 TYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLIKGFCKAKRVEEGMELFREM 422
Query: 368 KQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDF 427
Q G V N +TY TLI+G + + + +I+ KM +G+ P+ ++ ++D K
Sbjct: 423 SQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKL 482
Query: 428 DSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGI 481
+ A+V ++ ++ P+ NI++ A + + +L + + +P +
Sbjct: 483 EKALVVFEYLQKSKMEPNIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNV 536
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 95/355 (26%), Positives = 170/355 (47%), Gaps = 6/355 (1%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
++ K+GD + A +L M K +VV + +++ + +A +F +M++ G
Sbjct: 227 VVNGLCKRGDIDLALSLLKKMEKGKIEANVVIYNTIIDGLCKYKHMDDAFDLFNKMETKG 286
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
+P TY ++ ++ +A + +++ + + P+ F+ +I + K G
Sbjct: 287 IKPDVFTYNSLISCLCNYGRWSDASRLLSDMIERK---INPNVVTFNSLIDAFAKEGKLI 343
Query: 222 KARKLFALMAERGVQQSTVTYNSLM---SFETNYKEVSKIYDQMQRAGLQPDVVSYALLI 278
+A KLF M +R + + VTYNSL+ E +I+ M PDVV+Y LI
Sbjct: 344 EAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLI 403
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCS 338
+ KA+R EE + +F EM G+ YN L+ +G D A+ +FK M D
Sbjct: 404 KGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVP 463
Query: 339 PDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEI 398
PDI +Y+ +L +E A F L++ PN+ TY +I+G K +E ++
Sbjct: 464 PDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPNIYTYNIMIEGMCKAGKVEDGWDL 523
Query: 399 YDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILL 453
+ + + G+KPN I+TT++ + + + A ++EM+ G PD N L+
Sbjct: 524 FCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPDSGCYNTLI 578
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 74/325 (22%), Positives = 144/325 (44%), Gaps = 8/325 (2%)
Query: 149 NAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKP-DQKMF 207
+A A+F M S P PS + + +L + NKF +V ++L ++ ++ P + +
Sbjct: 64 DAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKF----DVVISLGEQMQNLGIPHNHYTY 119
Query: 208 HMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSK---IYDQMQR 264
+++ + + A + M + G + VT +SL++ + K +S+ + DQM
Sbjct: 120 SILLNCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMVE 179
Query: 265 AGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQ 324
G +PD V++ LI+ + EA+A+ + M+ G +P Y +++ G +D
Sbjct: 180 MGYKPDTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDL 239
Query: 325 ARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIK 384
A ++ K M + + ++ Y T++ M+ A F +++ G P+V TY +LI
Sbjct: 240 ALSLLKKMEKGKIEANVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNSLIS 299
Query: 385 GYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPP 444
+ M I PN F +++DA+ K A + EM P
Sbjct: 300 CLCNYGRWSDASRLLSDMIERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDP 359
Query: 445 DQKAKNILLSLAKTADERNEANELL 469
+ N L++ D +EA ++
Sbjct: 360 NIVTYNSLINGFCMHDRLDEAQQIF 384
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 64/299 (21%), Positives = 131/299 (43%), Gaps = 41/299 (13%)
Query: 88 IQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRY 147
IQ D N + + LI + ++A+++ + M K P VV++ L++ + + R
Sbjct: 353 IQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLIKGFCKAKRV 412
Query: 148 KNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMF 207
+ +FR M G + +TY ++ Q +F
Sbjct: 413 EEGMELFREMSQRGLVGNTVTYNTLI------------------------------QGLF 442
Query: 208 HMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSK---IYDQMQR 264
+AG + A+K+F M GV +TY+ L+ Y ++ K +++ +Q+
Sbjct: 443 --------QAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQK 494
Query: 265 AGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQ 324
+ ++P++ +Y ++I KA + E+ +F + GV+P Y ++ F G+ ++
Sbjct: 495 SKMEPNIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEE 554
Query: 325 ARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLI 383
A +F+ M+ D PD Y T++ A + D + + + ++ GFV + T +I
Sbjct: 555 ADALFREMKEDGTLPDSGCYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTISMVI 613
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 64/270 (23%), Positives = 118/270 (43%), Gaps = 3/270 (1%)
Query: 223 ARKLFALMAERGVQQSTVTYNSLMSF---ETNYKEVSKIYDQMQRAGLQPDVVSYALLIN 279
A LF M + S + ++ L+S + V + +QMQ G+ + +Y++L+N
Sbjct: 65 AVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILLN 124
Query: 280 AYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSP 339
+ + + ALAV +M+ G P + LL+ + + +A + M P
Sbjct: 125 CFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMVEMGYKP 184
Query: 340 DICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIY 399
D ++ T++ + A R+ G P++ TYGT++ G K +++ + +
Sbjct: 185 DTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLL 244
Query: 400 DKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTA 459
KM I+ N I+ TI+D K K D A + +ME+ G PD N L+S
Sbjct: 245 KKMEKGKIEANVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNSLISCLCNY 304
Query: 460 DERNEANELLGNFNHPNNEPGINGLSISVD 489
++A+ LL + P + + +D
Sbjct: 305 GRWSDASRLLSDMIERKINPNVVTFNSLID 334
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/158 (21%), Positives = 66/158 (41%)
Query: 322 VDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGT 381
+D A +F M + R P I ++ +LSA + + +++ G N TY
Sbjct: 62 LDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSI 121
Query: 382 LIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCG 441
L+ + + + L + + KM G +P+ +++++ Y K AV +M G
Sbjct: 122 LLNCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMVEMG 181
Query: 442 FPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEP 479
+ PD N L+ ++ +EA L+ +P
Sbjct: 182 YKPDTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQP 219
>gi|326500244|dbj|BAK06211.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 600
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 118/434 (27%), Positives = 205/434 (47%), Gaps = 41/434 (9%)
Query: 44 AVAVLRSERTRGQPLPKDLVLGTLVR-LKQLKKWNVVSEVLEWLRIQSWWDFNEMDFLML 102
AV +LRS + G P + GTL+R L + E+L + +S + N + + L
Sbjct: 113 AVGLLRSMQDCGVR-PDVVTYGTLIRGLCDAADVDTAVELLNEM-CESGIEPNVVVYSCL 170
Query: 103 ITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGP 162
+ Y K G + KV M+ +G P VV +TAL+++ R G+ K A + M G
Sbjct: 171 LHGYCKTGRWESVGKVFEEMSGRGIEPDVVMYTALIDSLCRHGKVKKAARVMDMMTERGL 230
Query: 163 RPSALTYQIILKLFVEANKFKEAEEV-------------------------------FMT 191
P+ +TY +++ + +EA ++ M
Sbjct: 231 EPNVVTYNVLINSMCKEGSVREALDLRKNMSEKGVQPDVVTYNTLITGLSSVLEMDEAMA 290
Query: 192 LLDEE---KSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSF 248
LL+E ++ ++PD F+ +I+ K G +A ++ A+MAE G + + V +N L+
Sbjct: 291 LLEEMMQGETRVRPDLMTFNSVIHGLCKIGWMRQALQVRAMMAENGCRCNLVAFNLLIGG 350
Query: 249 ETNYKEVSK---IYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPT 305
+V K + D+M +GLQPD +Y++LIN + K R+ E A + EM G+ P
Sbjct: 351 LLRVHKVKKAMELMDEMASSGLQPDSFTYSILINGFCKMRQVERAESYLSEMRHQGMEPE 410
Query: 306 HKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFR 365
Y LL A GM+ QAR +F M R+ C D +Y+TM+ + + + AE+F +
Sbjct: 411 PVHYIPLLKAMCDQGMMGQARDLFNEMDRN-CKLDAAAYSTMIHGAFKSGEKKIAEEFLK 469
Query: 366 RLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNK 425
+ +G +P+ +TY I +AK +L + +M +G P+ +F +++ YG
Sbjct: 470 DMIDEGLIPDAVTYSIPINMFAKSGDLAAAERVLKQMTASGFVPDVAVFDSLIQGYGAKG 529
Query: 426 DFDSAVVWYKEMES 439
D + + +EM +
Sbjct: 530 DTEKILELTREMTA 543
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 89/352 (25%), Positives = 177/352 (50%), Gaps = 11/352 (3%)
Query: 102 LITAYGKQGDFNKAEKVLSFMN---KKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQ 158
++ A +QG + A +L M+ + P+ +S+T LM A R A + R MQ
Sbjct: 62 VLAALCRQGCLDAALFLLRVMSHEPRLASRPNAISYTTLMRALCADRRAAQAVGLLRSMQ 121
Query: 159 SSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAG 218
G RP +TY +++ +A A E+ + + S ++P+ ++ +++ Y K G
Sbjct: 122 DCGVRPDVVTYGTLIRGLCDAADVDTAVELLNEMCE---SGIEPNVVVYSCLLHGYCKTG 178
Query: 219 GYEKARKLFALMAERGVQQSTVTYNSLMSFETNY---KEVSKIYDQMQRAGLQPDVVSYA 275
+E K+F M+ RG++ V Y +L+ + K+ +++ D M GL+P+VV+Y
Sbjct: 179 RWESVGKVFEEMSGRGIEPDVVMYTALIDSLCRHGKVKKAARVMDMMTERGLEPNVVTYN 238
Query: 276 LLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRR- 334
+LIN+ K EAL + + M + GV+P YN L+ + +D+A + + M +
Sbjct: 239 VLINSMCKEGSVREALDLRKNMSEKGVQPDVVTYNTLITGLSSVLEMDEAMALLEEMMQG 298
Query: 335 -DRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLE 393
R PD+ ++ +++ M A + + ++G N++ + LI G +V+ ++
Sbjct: 299 ETRVRPDLMTFNSVIHGLCKIGWMRQALQVRAMMAENGCRCNLVAFNLLIGGLLRVHKVK 358
Query: 394 KMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPD 445
K ME+ D+M +G++P+ ++ +++ + K + + A + EM G P+
Sbjct: 359 KAMELMDEMASSGLQPDSFTYSILINGFCKMRQVERAESYLSEMRHQGMEPE 410
Score = 95.1 bits (235), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 77/354 (21%), Positives = 139/354 (39%), Gaps = 40/354 (11%)
Query: 166 ALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARK 225
A++Y +L A + + E + +P+ + ++ +A
Sbjct: 56 AVSYNTVLAALCRQGCLDAALFLLRVMSHEPRLASRPNAISYTTLMRALCADRRAAQAVG 115
Query: 226 LFALMAERGVQQSTVTYNSLMSFETNYKEVS---KIYDQMQRAGLQPDVVSYALLINAYG 282
L M + GV+ VTY +L+ + +V ++ ++M +G++P+VV Y+ L++ Y
Sbjct: 116 LLRSMQDCGVRPDVVTYGTLIRGLCDAADVDTAVELLNEMCESGIEPNVVVYSCLLHGYC 175
Query: 283 KARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDIC 342
K R E VFEEM G+ P Y L+D+ G V +A V M P++
Sbjct: 176 KTGRWESVGKVFEEMSGRGIEPDVVMYTALIDSLCRHGKVKKAARVMDMMTERGLEPNVV 235
Query: 343 SYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKM 402
+Y ++++ + A + + + G P+V+TY TLI G + V +++ M + ++M
Sbjct: 236 TYNVLINSMCKEGSVREALDLRKNMSEKGVQPDVVTYNTLITGLSSVLEMDEAMALLEEM 295
Query: 403 -----RV--------------------------------NGIKPNQTIFTTIMDAYGKNK 425
RV NG + N F ++ +
Sbjct: 296 MQGETRVRPDLMTFNSVIHGLCKIGWMRQALQVRAMMAENGCRCNLVAFNLLIGGLLRVH 355
Query: 426 DFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEP 479
A+ EM S G PD +IL++ + A L H EP
Sbjct: 356 KVKKAMELMDEMASSGLQPDSFTYSILINGFCKMRQVERAESYLSEMRHQGMEP 409
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 64/280 (22%), Positives = 118/280 (42%), Gaps = 51/280 (18%)
Query: 228 ALMAERGVQQSTVTYNSLMSFETNYKEVS------KIYDQMQRAGLQPDVVSYALLINAY 281
AL++ + V+YN++++ + ++ R +P+ +SY L+ A
Sbjct: 45 ALLSALPSVRDAVSYNTVLAALCRQGCLDAALFLLRVMSHEPRLASRPNAISYTTLMRAL 104
Query: 282 GKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDI 341
RR +A+ + M D GVR PD+
Sbjct: 105 CADRRAAQAVGLLRSMQDCGVR-----------------------------------PDV 129
Query: 342 CSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDK 401
+Y T++ +A+D++ A + + + G PNV+ Y L+ GY K E + +++++
Sbjct: 130 VTYGTLIRGLCDAADVDTAVELLNEMCESGIEPNVVVYSCLLHGYCKTGRWESVGKVFEE 189
Query: 402 MRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILL-SLAKTAD 460
M GI+P+ ++T ++D+ ++ A M G P+ N+L+ S+ K
Sbjct: 190 MSGRGIEPDVVMYTALIDSLCRHGKVKKAARVMDMMTERGLEPNVVTYNVLINSMCKEGS 249
Query: 461 ERNEANELLGNFNHPNNEPG-------INGLSISVDEEDD 493
R EA +L N + +P I GLS SV E D+
Sbjct: 250 VR-EALDLRKNMSEKGVQPDVVTYNTLITGLS-SVLEMDE 287
>gi|223948189|gb|ACN28178.1| unknown [Zea mays]
gi|413935735|gb|AFW70286.1| hypothetical protein ZEAMMB73_980179 [Zea mays]
Length = 597
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 112/442 (25%), Positives = 209/442 (47%), Gaps = 41/442 (9%)
Query: 61 DLVLGTLVRLKQLKKWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLS 120
D ++ V+L+ ++W + V EW+ +S + + + + +LI AYG++ ++AE
Sbjct: 137 DDIVNVAVQLRLNRQWEPIITVCEWVLRRSSFRPDIICYNLLIDAYGQKRQLSEAEAAYM 196
Query: 121 FMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEAN 180
+ + P+ ++ L+ AY G+ AE + MQ +G P+A Y L ++A
Sbjct: 197 ALLEARCVPTEDTYALLLRAYCGSGQLHRAEGVISEMQRNGIPPTATVYNAYLDGLLKAR 256
Query: 181 KFKEAEEVF-------------------------------MTLLDEEKS-PLKPDQKMFH 208
++A EV+ + + E KS KP+ +
Sbjct: 257 CSEKAVEVYQRMKKERCRTNTETYTLMINVYGKANQPMSSLRVFREMKSVGCKPNICTYT 316
Query: 209 MMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNY---KEVSKIYDQMQRA 265
++ + + G EKA ++F M + G + YN+LM + + S+I+ M+
Sbjct: 317 ALVNAFAREGLCEKAEEVFEEMQQAGHEPDVYAYNALMEAYSRAGLPQGASEIFSLMEHM 376
Query: 266 GLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQA 325
G +PD SY +L++A+G+A +EA A F+E+ G+RPT K++ +LL A A SG V +
Sbjct: 377 GCEPDRASYNILVDAFGRAGLHQEAEAAFQELKQQGMRPTMKSHMLLLSAHARSGNVARC 436
Query: 326 RTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQ-DGFV---PNVITYGT 381
V + + PD + ML+AY A ++ E+ F +++ DG + P+ TY
Sbjct: 437 EEVMAQLHKSGLRPDTFALNAMLNAYGRAGRLDDMERLFAAMERGDGAIAGAPDTSTYNV 496
Query: 382 LIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCG 441
++ Y + L++M + + G+ + +T+ + AY + K++ + ++EM G
Sbjct: 497 MVNAYGRAGYLDRMEAAFRSLAARGLAADVVTWTSRIGAYARKKEYGQCLRVFEEMVDAG 556
Query: 442 FPPDQKAKNILLSLAKTADERN 463
PD +L LA +DER
Sbjct: 557 CYPDAGTAKVL--LAACSDERQ 576
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 68/228 (29%), Positives = 113/228 (49%)
Query: 262 MQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGM 321
++R+ +PD++ Y LLI+AYG+ R+ EA A + +L+A PT Y +LL A+ SG
Sbjct: 163 LRRSSFRPDIICYNLLIDAYGQKRQLSEAEAAYMALLEARCVPTEDTYALLLRAYCGSGQ 222
Query: 322 VDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGT 381
+ +A V M+R+ P Y L + A E A + ++R+K++ N TY
Sbjct: 223 LHRAEGVISEMQRNGIPPTATVYNAYLDGLLKARCSEKAVEVYQRMKKERCRTNTETYTL 282
Query: 382 LIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCG 441
+I Y K N + ++ +M+ G KPN +T +++A+ + + A ++EM+ G
Sbjct: 283 MINVYGKANQPMSSLRVFREMKSVGCKPNICTYTALVNAFAREGLCEKAEEVFEEMQQAG 342
Query: 442 FPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGINGLSISVD 489
PD A N L+ A A+E+ H EP +I VD
Sbjct: 343 HEPDVYAYNALMEAYSRAGLPQGASEIFSLMEHMGCEPDRASYNILVD 390
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 86/285 (30%), Positives = 126/285 (44%), Gaps = 49/285 (17%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + L+ A+ ++G KAE+V M + G+ P V ++ ALMEAY R G + A IF
Sbjct: 311 NICTYTALVNAFAREGLCEKAEEVFEEMQQAGHEPDVYAYNALMEAYSRAGLPQGASEIF 370
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVF---------------MTLLDE---- 195
M+ G P +Y I++ F A +EAE F M LL
Sbjct: 371 SLMEHMGCEPDRASYNILVDAFGRAGLHQEAEAAFQELKQQGMRPTMKSHMLLLSAHARS 430
Query: 196 -------------EKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERG-----VQQ 237
KS L+PD + M+ Y +AG + +LFA M ERG
Sbjct: 431 GNVARCEEVMAQLHKSGLRPDTFALNAMLNAYGRAGRLDDMERLFAAM-ERGDGAIAGAP 489
Query: 238 STVTYNSLMSFETNYKEVSKIYDQMQRA-------GLQPDVVSYALLINAYGKARREEEA 290
T TYN ++ N + D+M+ A GL DVV++ I AY + + +
Sbjct: 490 DTSTYNVMV----NAYGRAGYLDRMEAAFRSLAARGLAADVVTWTSRIGAYARKKEYGQC 545
Query: 291 LAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRD 335
L VFEEM+DAG P +LL A + V+Q + + + M +D
Sbjct: 546 LRVFEEMVDAGCYPDAGTAKVLLAACSDERQVEQVKAIVRSMHKD 590
Score = 44.3 bits (103), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 22/98 (22%), Positives = 48/98 (48%)
Query: 101 MLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSS 160
+++ AYG+ G ++ E + +G A VV+ T+ + AY R Y +F M +
Sbjct: 496 VMVNAYGRAGYLDRMEAAFRSLAARGLAADVVTWTSRIGAYARKKEYGQCLRVFEEMVDA 555
Query: 161 GPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKS 198
G P A T +++L + + ++ + + ++ + K+
Sbjct: 556 GCYPDAGTAKVLLAACSDERQVEQVKAIVRSMHKDAKT 593
>gi|226507918|ref|NP_001144813.1| uncharacterized protein LOC100277891 [Zea mays]
gi|195647376|gb|ACG43156.1| hypothetical protein [Zea mays]
Length = 597
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 114/445 (25%), Positives = 209/445 (46%), Gaps = 47/445 (10%)
Query: 61 DLVLGTLVRLKQLKKWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLS 120
D ++ V+L+ ++W + V EW+ +S + + + + +LI AYG++ ++AE
Sbjct: 137 DDIVNVAVQLRLNRQWEPIITVCEWVLRRSSFRPDIICYNLLIDAYGQKRQLSEAEAAYM 196
Query: 121 FMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEAN 180
+ + P+ ++ L+ AY G+ AE + MQ +G P+A Y L ++A
Sbjct: 197 ALLEARCVPTEDTYALLLRAYCGSGQLHRAEGVISEMQRNGIPPTATVYNAYLDGLLKAR 256
Query: 181 KFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKA----------------------- 217
++A EV+ + +K + + + + +MI +Y KA
Sbjct: 257 CSEKAVEVYQRM---KKERCRTNTZTYXLMINVYGKANQPMSSLRVFREMKSVGCKPNIC 313
Query: 218 ------------GGYEKARKLFALMAERGVQQSTVTYNSLMSFETNY---KEVSKIYDQM 262
G EKA ++F M + G + YN+LM + + S+I+ M
Sbjct: 314 TYTALVNAFAREGLCEKAEEVFEEMQQAGHEPDVYAYNALMEAYSRAGLPQGASEIFSLM 373
Query: 263 QRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMV 322
+ G +PD SY +L++A+G+A +EA A F+E+ G+RPT K++ +LL A A SG V
Sbjct: 374 EHMGCEPDRASYNILVDAFGRAGLHQEAEAAFQELKQQGMRPTMKSHMLLLSAHARSGNV 433
Query: 323 DQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQ-DGF---VPNVIT 378
+ V + + PD + ML+AY A ++ E+ F +++ DG P+ T
Sbjct: 434 ARCEEVMAQLHKSGLRPDTFALNAMLNAYGRAGRLDDMERLFAAMERGDGASAGAPDTST 493
Query: 379 YGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEME 438
Y L+ Y + L++M + + G+ + +T+ + AY + K++ + ++EM
Sbjct: 494 YNVLVNAYGRAGYLDRMEAAFRSLAARGLAADVVTWTSRIGAYARKKEYGQCLRVFEEMV 553
Query: 439 SCGFPPDQKAKNILLSLAKTADERN 463
G PD +L LA +DER
Sbjct: 554 DAGCYPDAGTAKVL--LAACSDERQ 576
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 68/228 (29%), Positives = 113/228 (49%)
Query: 262 MQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGM 321
++R+ +PD++ Y LLI+AYG+ R+ EA A + +L+A PT Y +LL A+ SG
Sbjct: 163 LRRSSFRPDIICYNLLIDAYGQKRQLSEAEAAYMALLEARCVPTEDTYALLLRAYCGSGQ 222
Query: 322 VDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGT 381
+ +A V M+R+ P Y L + A E A + ++R+K++ N TY
Sbjct: 223 LHRAEGVISEMQRNGIPPTATVYNAYLDGLLKARCSEKAVEVYQRMKKERCRTNTZTYXL 282
Query: 382 LIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCG 441
+I Y K N + ++ +M+ G KPN +T +++A+ + + A ++EM+ G
Sbjct: 283 MINVYGKANQPMSSLRVFREMKSVGCKPNICTYTALVNAFAREGLCEKAEEVFEEMQQAG 342
Query: 442 FPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGINGLSISVD 489
PD A N L+ A A+E+ H EP +I VD
Sbjct: 343 HEPDVYAYNALMEAYSRAGLPQGASEIFSLMEHMGCEPDRASYNILVD 390
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 88/285 (30%), Positives = 126/285 (44%), Gaps = 49/285 (17%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + L+ A+ ++G KAE+V M + G+ P V ++ ALMEAY R G + A IF
Sbjct: 311 NICTYTALVNAFAREGLCEKAEEVFEEMQQAGHEPDVYAYNALMEAYSRAGLPQGASEIF 370
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVF---------------MTLLDE---- 195
M+ G P +Y I++ F A +EAE F M LL
Sbjct: 371 SLMEHMGCEPDRASYNILVDAFGRAGLHQEAEAAFQELKQQGMRPTMKSHMLLLSAHARS 430
Query: 196 -------------EKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQS---- 238
KS L+PD + M+ Y +AG + +LFA M ERG S
Sbjct: 431 GNVARCEEVMAQLHKSGLRPDTFALNAMLNAYGRAGRLDDMERLFAAM-ERGDGASAGAP 489
Query: 239 -TVTYNSLMSFETNYKEVSKIYDQMQRA-------GLQPDVVSYALLINAYGKARREEEA 290
T TYN L+ N + D+M+ A GL DVV++ I AY + + +
Sbjct: 490 DTSTYNVLV----NAYGRAGYLDRMEAAFRSLAARGLAADVVTWTSRIGAYARKKEYGQC 545
Query: 291 LAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRD 335
L VFEEM+DAG P +LL A + V+Q + + M +D
Sbjct: 546 LRVFEEMVDAGCYPDAGTAKVLLAACSDERQVEQVTAIVRSMHKD 590
Score = 44.7 bits (104), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 23/98 (23%), Positives = 47/98 (47%)
Query: 101 MLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSS 160
+L+ AYG+ G ++ E + +G A VV+ T+ + AY R Y +F M +
Sbjct: 496 VLVNAYGRAGYLDRMEAAFRSLAARGLAADVVTWTSRIGAYARKKEYGQCLRVFEEMVDA 555
Query: 161 GPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKS 198
G P A T +++L + + ++ + ++ + K+
Sbjct: 556 GCYPDAGTAKVLLAACSDERQVEQVTAIVRSMHKDAKT 593
>gi|125559009|gb|EAZ04545.1| hypothetical protein OsI_26694 [Oryza sativa Indica Group]
Length = 784
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 97/318 (30%), Positives = 174/318 (54%), Gaps = 13/318 (4%)
Query: 142 GRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLK 201
R GR A A+ + P P A Y ++ F A +F++A VF ++D S ++
Sbjct: 152 ARAGRLAEASALL----DAAPGPDAGAYTALVSAFSRAGRFRDAVAVFRRMVD---SGVQ 204
Query: 202 PDQKMFHMMIYMYKK-AGGYEKARKLFALMAERGVQQSTVTYNSLMSF---ETNYKEVSK 257
P +++++++Y K A +++ +L A M E GV TYN+L+S YKE ++
Sbjct: 205 PAIVTYNVVLHVYSKMAVPWKEVVELVASMKEHGVAPDRYTYNTLISCCRRRALYKEAAQ 264
Query: 258 IYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFA 317
++D+M+ +G +PD V++ L++ YGKARR +EA+ V +EM G P+ YN L+ ++
Sbjct: 265 VFDEMKASGFEPDKVTFNSLLDVYGKARRHDEAIEVIQEMERVGCPPSVVTYNSLISSYV 324
Query: 318 ISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVI 377
G+++QA + + M PD+ +YTT++S A ++ A + + ++G PN+
Sbjct: 325 KDGLLEQAVALKQEMEVKGIKPDVVTYTTLISGLDRAGKIDAAIVEYDEMVRNGCKPNLC 384
Query: 378 TYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVV-WYKE 436
TY LIK + +MM ++D++R G P+ + T++ +G+N DS V +KE
Sbjct: 385 TYNALIKMHGVRGKFPEMMAVFDELRSAGFVPDIVTWNTLLAVFGQN-GLDSEVSGVFKE 443
Query: 437 MESCGFPPDQKAKNILLS 454
M+ G+ P++ L+S
Sbjct: 444 MKKAGYIPERDTYVSLIS 461
Score = 141 bits (356), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 90/332 (27%), Positives = 154/332 (46%), Gaps = 11/332 (3%)
Query: 128 APSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEE 187
AP + + + + G+ G A R + G +++ A + EA
Sbjct: 103 APELAAVVGALGSRGQPGAALAALHAARELHGEGVLHHPRVLATAIRVMARAGRLAEAS- 161
Query: 188 VFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMS 247
LLD P D + ++ + +AG + A +F M + GVQ + VTYN ++
Sbjct: 162 ---ALLDAAPGP---DAGAYTALVSAFSRAGRFRDAVAVFRRMVDSGVQPAIVTYNVVLH 215
Query: 248 FETN----YKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVR 303
+ +KEV ++ M+ G+ PD +Y LI+ + +EA VF+EM +G
Sbjct: 216 VYSKMAVPWKEVVELVASMKEHGVAPDRYTYNTLISCCRRRALYKEAAQVFDEMKASGFE 275
Query: 304 PTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKF 363
P +N LLD + + D+A V + M R C P + +Y +++S+YV +E A
Sbjct: 276 PDKVTFNSLLDVYGKARRHDEAIEVIQEMERVGCPPSVVTYNSLISSYVKDGLLEQAVAL 335
Query: 364 FRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGK 423
+ ++ G P+V+TY TLI G + ++ + YD+M NG KPN + ++ +G
Sbjct: 336 KQEMEVKGIKPDVVTYTTLISGLDRAGKIDAAIVEYDEMVRNGCKPNLCTYNALIKMHGV 395
Query: 424 NKDFDSAVVWYKEMESCGFPPDQKAKNILLSL 455
F + + E+ S GF PD N LL++
Sbjct: 396 RGKFPEMMAVFDELRSAGFVPDIVTWNTLLAV 427
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 82/320 (25%), Positives = 157/320 (49%), Gaps = 6/320 (1%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
LI+ ++ + +A +V M G+ P V+ +L++ YG+ R+ A + + M+ G
Sbjct: 249 LISCCRRRALYKEAAQVFDEMKASGFEPDKVTFNSLLDVYGKARRHDEAIEVIQEMERVG 308
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
PS +TY ++ +V+ ++A + + E +KPD + +I +AG +
Sbjct: 309 CPPSVVTYNSLISSYVKDGLLEQAVALKQEM---EVKGIKPDVVTYTTLISGLDRAGKID 365
Query: 222 KARKLFALMAERGVQQSTVTYNSLMSFET---NYKEVSKIYDQMQRAGLQPDVVSYALLI 278
A + M G + + TYN+L+ + E+ ++D+++ AG PD+V++ L+
Sbjct: 366 AAIVEYDEMVRNGCKPNLCTYNALIKMHGVRGKFPEMMAVFDELRSAGFVPDIVTWNTLL 425
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCS 338
+G+ + E VF+EM AG P Y L+ +++ G+ D A ++K M
Sbjct: 426 AVFGQNGLDSEVSGVFKEMKKAGYIPERDTYVSLISSYSRCGLFDLAMQIYKRMMEAGIY 485
Query: 339 PDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEI 398
PD+ +Y +LSA E AEK F +++ P+ +Y +L+ YA L+KM +
Sbjct: 486 PDVSTYNAVLSALARGGRWEQAEKLFAEMEERDCKPDEYSYSSLLHAYANAKRLDKMKAL 545
Query: 399 YDKMRVNGIKPNQTIFTTIM 418
D + I+P+ + T++
Sbjct: 546 SDDIYSERIEPHNWLVKTLV 565
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 86/318 (27%), Positives = 159/318 (50%), Gaps = 12/318 (3%)
Query: 117 KVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLF 176
++++ M + G AP ++ L+ R YK A +F M++SG P +T+ +L ++
Sbjct: 229 ELVASMKEHGVAPDRYTYNTLISCCRRRALYKEAAQVFDEMKASGFEPDKVTFNSLLDVY 288
Query: 177 VEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQ 236
+A + EA EV + E+ P ++ +I Y K G E+A L M +G++
Sbjct: 289 GKARRHDEAIEVIQEM---ERVGCPPSVVTYNSLISSYVKDGLLEQAVALKQEMEVKGIK 345
Query: 237 QSTVTYNSLMSFETNYKEVSKI------YDQMQRAGLQPDVVSYALLINAYGKARREEEA 290
VTY +L+S KI YD+M R G +P++ +Y LI +G + E
Sbjct: 346 PDVVTYTTLIS---GLDRAGKIDAAIVEYDEMVRNGCKPNLCTYNALIKMHGVRGKFPEM 402
Query: 291 LAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSA 350
+AVF+E+ AG P +N LL F +G+ + VFK M++ P+ +Y +++S+
Sbjct: 403 MAVFDELRSAGFVPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKKAGYIPERDTYVSLISS 462
Query: 351 YVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPN 410
Y + A + ++R+ + G P+V TY ++ A+ E+ +++ +M KP+
Sbjct: 463 YSRCGLFDLAMQIYKRMMEAGIYPDVSTYNAVLSALARGGRWEQAEKLFAEMEERDCKPD 522
Query: 411 QTIFTTIMDAYGKNKDFD 428
+ +++++ AY K D
Sbjct: 523 EYSYSSLLHAYANAKRLD 540
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 88/376 (23%), Positives = 183/376 (48%), Gaps = 6/376 (1%)
Query: 97 MDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRR 156
+ + LI+ + G + A M + G P++ ++ AL++ +G G++ A+F
Sbjct: 349 VTYTTLISGLDRAGKIDAAIVEYDEMVRNGCKPNLCTYNALIKMHGVRGKFPEMMAVFDE 408
Query: 157 MQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKK 216
++S+G P +T+ +L +F + E VF + +K+ P++ + +I Y +
Sbjct: 409 LRSAGFVPDIVTWNTLLAVFGQNGLDSEVSGVFKEM---KKAGYIPERDTYVSLISSYSR 465
Query: 217 AGGYEKARKLFALMAERGVQQSTVTYNSLMSFETN---YKEVSKIYDQMQRAGLQPDVVS 273
G ++ A +++ M E G+ TYN+++S +++ K++ +M+ +PD S
Sbjct: 466 CGLFDLAMQIYKRMMEAGIYPDVSTYNAVLSALARGGRWEQAEKLFAEMEERDCKPDEYS 525
Query: 274 YALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMR 333
Y+ L++AY A+R ++ A+ +++ + P + L+ + + +A F +R
Sbjct: 526 YSSLLHAYANAKRLDKMKALSDDIYSERIEPHNWLVKTLVLVNSKVNNLAEAEKAFLELR 585
Query: 334 RDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLE 393
+ RCS DI M+S Y + EK +K+ + TY +L+ Y+++ + E
Sbjct: 586 QKRCSLDINVLNAMVSIYGKNRMVRKVEKILSLMKESAINLSAATYNSLMHMYSRLGDCE 645
Query: 394 KMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILL 453
K I +++ +G++P++ + T++ AYG+ A + EM+ G PD NI +
Sbjct: 646 KCENILTEIKSSGVRPDRYSYNTVIYAYGRKGQMKEASRLFSEMKCSGLKPDVVTYNIFV 705
Query: 454 SLAKTADERNEANELL 469
+ EA EL+
Sbjct: 706 KSYVSNSMFEEAIELV 721
Score = 132 bits (333), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 91/340 (26%), Positives = 174/340 (51%), Gaps = 8/340 (2%)
Query: 90 SWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKN 149
S ++ +++ F L+ YGK ++A +V+ M + G PSVV++ +L+ +Y + G +
Sbjct: 272 SGFEPDKVTFNSLLDVYGKARRHDEAIEVIQEMERVGCPPSVVTYNSLISSYVKDGLLEQ 331
Query: 150 AEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDE-EKSPLKPDQKMFH 208
A A+ + M+ G +P +TY ++ A K A + DE ++ KP+ ++
Sbjct: 332 AVALKQEMEVKGIKPDVVTYTTLISGLDRAGKIDAA----IVEYDEMVRNGCKPNLCTYN 387
Query: 209 MMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMS-FETNY--KEVSKIYDQMQRA 265
+I M+ G + + +F + G VT+N+L++ F N EVS ++ +M++A
Sbjct: 388 ALIKMHGVRGKFPEMMAVFDELRSAGFVPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKKA 447
Query: 266 GLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQA 325
G P+ +Y LI++Y + + A+ +++ M++AG+ P YN +L A A G +QA
Sbjct: 448 GYIPERDTYVSLISSYSRCGLFDLAMQIYKRMMEAGIYPDVSTYNAVLSALARGGRWEQA 507
Query: 326 RTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKG 385
+F M C PD SY+++L AY NA ++ + + + P+ TL+
Sbjct: 508 EKLFAEMEERDCKPDEYSYSSLLHAYANAKRLDKMKALSDDIYSERIEPHNWLVKTLVLV 567
Query: 386 YAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNK 425
+KVNNL + + + ++R + + ++ YGKN+
Sbjct: 568 NSKVNNLAEAEKAFLELRQKRCSLDINVLNAMVSIYGKNR 607
Score = 125 bits (315), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 82/361 (22%), Positives = 166/361 (45%), Gaps = 9/361 (2%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
L+ +G+ G ++ V M K GY P ++ +L+ +Y R G + A I++RM +G
Sbjct: 424 LLAVFGQNGLDSEVSGVFKEMKKAGYIPERDTYVSLISSYSRCGLFDLAMQIYKRMMEAG 483
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
P TY +L ++++AE++F + E+ KPD+ + +++ Y A +
Sbjct: 484 IYPDVSTYNAVLSALARGGRWEQAEKLFAEM---EERDCKPDEYSYSSLLHAYANAKRLD 540
Query: 222 KARKLFALMAERGVQQSTVTYNSLMSFET---NYKEVSKIYDQMQRAGLQPDVVSYALLI 278
K + L + ++ +L+ + N E K + ++++ D+ ++
Sbjct: 541 KMKALSDDIYSERIEPHNWLVKTLVLVNSKVNNLAEAEKAFLELRQKRCSLDINVLNAMV 600
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCS 338
+ YGK R + + M ++ + + YN L+ ++ G ++ + ++
Sbjct: 601 SIYGKNRMVRKVEKILSLMKESAINLSAATYNSLMHMYSRLGDCEKCENILTEIKSSGVR 660
Query: 339 PDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEI 398
PD SY T++ AY M+ A + F +K G P+V+TY +K Y + E+ +E+
Sbjct: 661 PDRYSYNTVIYAYGRKGQMKEASRLFSEMKCSGLKPDVVTYNIFVKSYVSNSMFEEAIEL 720
Query: 399 YDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESC--GFPPDQKAKNILLSLA 456
M G KPN+ + +I++ Y +N A ++ + G+ Q+ +N+ LA
Sbjct: 721 VRYMVTQGCKPNERTYNSIVEGYCRNGKLTDAKIFVSNLPQLHPGY-SKQEQQNLFEVLA 779
Query: 457 K 457
K
Sbjct: 780 K 780
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 72/144 (50%), Gaps = 1/144 (0%)
Query: 339 PDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVN-NLEKMME 397
PD +YT ++SA+ A A FRR+ G P ++TY ++ Y+K+ ++++E
Sbjct: 170 PDAGAYTALVSAFSRAGRFRDAVAVFRRMVDSGVQPAIVTYNVVLHVYSKMAVPWKEVVE 229
Query: 398 IYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAK 457
+ M+ +G+ P++ + T++ + + A + EM++ GF PD+ N LL +
Sbjct: 230 LVASMKEHGVAPDRYTYNTLISCCRRRALYKEAAQVFDEMKASGFEPDKVTFNSLLDVYG 289
Query: 458 TADERNEANELLGNFNHPNNEPGI 481
A +EA E++ P +
Sbjct: 290 KARRHDEAIEVIQEMERVGCPPSV 313
>gi|90399139|emb|CAJ86163.1| H0913C04.4 [Oryza sativa Indica Group]
gi|125550286|gb|EAY96108.1| hypothetical protein OsI_17985 [Oryza sativa Indica Group]
Length = 900
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 101/395 (25%), Positives = 187/395 (47%), Gaps = 43/395 (10%)
Query: 98 DFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRM 157
+F ++I Y K+GD + A M +G P+ T+L+ AY + A + M
Sbjct: 265 EFGLMIVYYAKRGDKHHARATFENMRARGIEPNAFVFTSLVHAYAVARDMRGALSCVEEM 324
Query: 158 QSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKP-DQKMFHMMIYMYKK 216
+S G + +TY I++ F + N + A+ +F E K+ L + ++ +I+ + +
Sbjct: 325 KSEGLELTIVTYSILISGFAKINDSQSADNLF----KEAKTKLSSLNGIIYSNIIHAHCQ 380
Query: 217 AGGYEKARKLFALMAERGVQQSTVTYNSLMSFET---NYKEVSKIYDQMQRAGLQPDVVS 273
+G E+A +L M E G+ Y+S+M T N + ++++++ G +P ++S
Sbjct: 381 SGNMERAEELVCEMEEDGIDAPIDVYHSMMHGYTIIQNENKCLVVFERLKECGFKPSIIS 440
Query: 274 YALLINAYGKARREEEAL-----------------------------------AVFEEML 298
Y L+N Y K + +AL A+FEEML
Sbjct: 441 YGCLLNLYVKIGKVAKALSISKEMESCGIKHNNKTYSMLINGFIHLHDFANAFAIFEEML 500
Query: 299 DAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDME 358
+G++P YN+L++AF G +D+A + + M+++R P ++ ++ Y A DM+
Sbjct: 501 RSGLQPDRAIYNLLIEAFCKMGNMDRAICILEKMQKERMQPSNRAFRPIIEGYAVAGDMK 560
Query: 359 GAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIM 418
A +++ G VP V+TY LI G + + +++ + + DKM + GI PN+ +T IM
Sbjct: 561 SALDTLDLMRRSGCVPTVMTYNALIHGLVRKHKVQRAVSVLDKMSIAGITPNEHTYTIIM 620
Query: 419 DAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILL 453
Y + D A ++ +++ G D LL
Sbjct: 621 RGYAASGDIGKAFEYFTKIKESGLKLDVYIYETLL 655
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 88/380 (23%), Positives = 181/380 (47%), Gaps = 41/380 (10%)
Query: 113 NKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQII 172
NK V + + G+ PS++S+ L+ Y + G+ A +I + M+S G + + TY ++
Sbjct: 420 NKCLVVFERLKECGFKPSIISYGCLLNLYVKIGKVAKALSISKEMESCGIKHNNKTYSML 479
Query: 173 LKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAE 232
+ F+ + F A +F +L +S L+PD+ +++++I + K G ++A + M +
Sbjct: 480 INGFIHLHDFANAFAIFEEML---RSGLQPDRAIYNLLIEAFCKMGNMDRAICILEKMQK 536
Query: 233 RGVQQSTVTYNSLM---SFETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEE 289
+Q S + ++ + + K D M+R+G P V++Y LI+ + + +
Sbjct: 537 ERMQPSNRAFRPIIEGYAVAGDMKSALDTLDLMRRSGCVPTVMTYNALIHGLVRKHKVQR 596
Query: 290 ALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLS 349
A++V ++M AG+ P Y I++ +A SG + +A F ++ D+ Y T+L
Sbjct: 597 AVSVLDKMSIAGITPNEHTYTIIMRGYAASGDIGKAFEYFTKIKESGLKLDVYIYETLLR 656
Query: 350 AYVNASDMEGA-----------------------------------EKFFRRLKQDGFVP 374
A + M+ A E +++K+DG P
Sbjct: 657 ACCKSGRMQSALAVTREMSFQKIPRNTFIYNILIDGWARRGDVWEAEDLMKQMKEDGVPP 716
Query: 375 NVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWY 434
N+ TY + I K ++++ ++ ++M G+KPN +TT++ + + D A+ +
Sbjct: 717 NIHTYTSYINACCKAGDMQRAEKVIEEMVDVGLKPNVKTYTTLIKGWARVSLPDRALKCF 776
Query: 435 KEMESCGFPPDQKAKNILLS 454
+EM+ G PD+ + + L++
Sbjct: 777 EEMKLAGLKPDEASYHCLVT 796
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 97/361 (26%), Positives = 179/361 (49%), Gaps = 10/361 (2%)
Query: 63 VLGTLVRLKQLKKWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFM 122
+L V++ ++ K +S+ +E I+ N + MLI + DF A + M
Sbjct: 444 LLNLYVKIGKVAKALSISKEMESCGIKH----NNKTYSMLINGFIHLHDFANAFAIFEEM 499
Query: 123 NKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKF 182
+ G P + L+EA+ + G A I +MQ +PS ++ I++ + A
Sbjct: 500 LRSGLQPDRAIYNLLIEAFCKMGNMDRAICILEKMQKERMQPSNRAFRPIIEGYAVAGDM 559
Query: 183 KEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTY 242
K A + TL +S P ++ +I+ + ++A + M+ G+ + TY
Sbjct: 560 KSALD---TLDLMRRSGCVPTVMTYNALIHGLVRKHKVQRAVSVLDKMSIAGITPNEHTY 616
Query: 243 NSLMSFETNYKEVSKIYD---QMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLD 299
+M ++ K ++ +++ +GL+ DV Y L+ A K+ R + ALAV EM
Sbjct: 617 TIIMRGYAASGDIGKAFEYFTKIKESGLKLDVYIYETLLRACCKSGRMQSALAVTREMSF 676
Query: 300 AGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEG 359
+ YNIL+D +A G V +A + K M+ D P+I +YT+ ++A A DM+
Sbjct: 677 QKIPRNTFIYNILIDGWARRGDVWEAEDLMKQMKEDGVPPNIHTYTSYINACCKAGDMQR 736
Query: 360 AEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMD 419
AEK + G PNV TY TLIKG+A+V+ ++ ++ +++M++ G+KP++ + ++
Sbjct: 737 AEKVIEEMVDVGLKPNVKTYTTLIKGWARVSLPDRALKCFEEMKLAGLKPDEASYHCLVT 796
Query: 420 A 420
+
Sbjct: 797 S 797
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 70/261 (26%), Positives = 126/261 (48%), Gaps = 4/261 (1%)
Query: 196 EKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLM---SFETNY 252
E+ P KP ++ F +MI Y K G AR F M RG++ + + SL+ + +
Sbjct: 256 ERIP-KPSRREFGLMIVYYAKRGDKHHARATFENMRARGIEPNAFVFTSLVHAYAVARDM 314
Query: 253 KEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNIL 312
+ ++M+ GL+ +V+Y++LI+ + K + A +F+E Y+ +
Sbjct: 315 RGALSCVEEMKSEGLELTIVTYSILISGFAKINDSQSADNLFKEAKTKLSSLNGIIYSNI 374
Query: 313 LDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGF 372
+ A SG +++A + M D I Y +M+ Y + F RLK+ GF
Sbjct: 375 IHAHCQSGNMERAEELVCEMEEDGIDAPIDVYHSMMHGYTIIQNENKCLVVFERLKECGF 434
Query: 373 VPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVV 432
P++I+YG L+ Y K+ + K + I +M GIK N ++ +++ + DF +A
Sbjct: 435 KPSIISYGCLLNLYVKIGKVAKALSISKEMESCGIKHNNKTYSMLINGFIHLHDFANAFA 494
Query: 433 WYKEMESCGFPPDQKAKNILL 453
++EM G PD+ N+L+
Sbjct: 495 IFEEMLRSGLQPDRAIYNLLI 515
Score = 108 bits (270), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 72/266 (27%), Positives = 133/266 (50%), Gaps = 7/266 (2%)
Query: 99 FLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQ 158
F +I Y GD A L M + G P+V+++ AL+ R + + A ++ +M
Sbjct: 546 FRPIIEGYAVAGDMKSALDTLDLMRRSGCVPTVMTYNALIHGLVRKHKVQRAVSVLDKMS 605
Query: 159 SSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAG 218
+G P+ TY II++ + + +A E F + ++S LK D ++ ++ K+G
Sbjct: 606 IAGITPNEHTYTIIMRGYAASGDIGKAFEYFTKI---KESGLKLDVYIYETLLRACCKSG 662
Query: 219 GYEKARKLFALMAERGVQQSTVTYNSLM---SFETNYKEVSKIYDQMQRAGLQPDVVSYA 275
+ A + M+ + + ++T YN L+ + + E + QM+ G+ P++ +Y
Sbjct: 663 RMQSALAVTREMSFQKIPRNTFIYNILIDGWARRGDVWEAEDLMKQMKEDGVPPNIHTYT 722
Query: 276 LLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRD 335
INA KA + A V EEM+D G++P K Y L+ +A + D+A F+ M+
Sbjct: 723 SYINACCKAGDMQRAEKVIEEMVDVGLKPNVKTYTTLIKGWARVSLPDRALKCFEEMKLA 782
Query: 336 RCSPDICSYTTMLSAYVN-ASDMEGA 360
PD SY ++++ ++ A+ MEG+
Sbjct: 783 GLKPDEASYHCLVTSLLSRATVMEGS 808
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/205 (22%), Positives = 98/205 (47%), Gaps = 4/205 (1%)
Query: 251 NYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYN 310
N++ V ++++ + P + L+I Y K + A A FE M G+ P +
Sbjct: 247 NWQAVVSAFERIPK----PSRREFGLMIVYYAKRGDKHHARATFENMRARGIEPNAFVFT 302
Query: 311 ILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQD 370
L+ A+A++ + A + + M+ + I +Y+ ++S + +D + A+ F+ K
Sbjct: 303 SLVHAYAVARDMRGALSCVEEMKSEGLELTIVTYSILISGFAKINDSQSADNLFKEAKTK 362
Query: 371 GFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSA 430
N I Y +I + + N+E+ E+ +M +GI ++ ++M Y ++ +
Sbjct: 363 LSSLNGIIYSNIIHAHCQSGNMERAEELVCEMEEDGIDAPIDVYHSMMHGYTIIQNENKC 422
Query: 431 VVWYKEMESCGFPPDQKAKNILLSL 455
+V ++ ++ CGF P + LL+L
Sbjct: 423 LVVFERLKECGFKPSIISYGCLLNL 447
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 48/94 (51%), Gaps = 1/94 (1%)
Query: 374 PNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVW 433
P+ +G +I YAK + ++ MR GI+PN +FT+++ AY +D A+
Sbjct: 261 PSRREFGLMIVYYAKRGDKHHARATFENMRARGIEPNAFVFTSLVHAYAVARDMRGALSC 320
Query: 434 YKEMESCGFPPDQKAKNILLS-LAKTADERNEAN 466
+EM+S G +IL+S AK D ++ N
Sbjct: 321 VEEMKSEGLELTIVTYSILISGFAKINDSQSADN 354
>gi|296087509|emb|CBI34098.3| unnamed protein product [Vitis vinifera]
Length = 718
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 120/473 (25%), Positives = 212/473 (44%), Gaps = 18/473 (3%)
Query: 8 KFMQKRRKVEVFKDAADEAGKKNWRRLMNQIE------EVGSAVAVLRSERTRGQPLPKD 61
KF + + E+ K K N R IE +G A+ +L E + +P
Sbjct: 92 KFGKMEKAAEILKGMITLGCKPNSRTFCLLIEGYCREHNMGRALELL-DEMEKRNLVPSA 150
Query: 62 LVLGTLVR-LKQLKKWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLS 120
+ G ++ L K ++ +++LE + S N + + LI Y +G +A ++L
Sbjct: 151 VSYGAMINGLCHCKDLSLANKLLEKMTF-SGLKPNVVVYSTLIMGYASEGRIEEARRLLD 209
Query: 121 FMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEAN 180
M+ G AP + + A++ + G+ + A +Q G +P A+T+ + + +
Sbjct: 210 GMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAFILGYSKTG 269
Query: 181 KFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKA----RKLFALMAERGVQ 236
K EA + F +LD L P+ ++ ++I + KAG +A R L AL VQ
Sbjct: 270 KMTEAAKYFDEMLDH---GLMPNNPLYTVLINGHFKAGNLMEALSIFRHLHALGVLPDVQ 326
Query: 237 QSTVTYNSLMSFETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEE 296
+ + L+ +E K++ +++ GL PDV +Y+ LI+ + K E+A + +E
Sbjct: 327 TCSAFIHGLLK-NGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDE 385
Query: 297 MLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASD 356
M G+ P YN L+D SG + +AR +F M PD +Y+TM+ Y + +
Sbjct: 386 MCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSEN 445
Query: 357 MEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTT 416
+ A F + G P+ Y L+ G K ++EK M ++ +M G + F T
Sbjct: 446 VAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGFATTLS-FNT 504
Query: 417 IMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELL 469
++D Y K+ A ++EM + PD ++ A + EAN L
Sbjct: 505 LIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLF 557
Score = 159 bits (401), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 104/375 (27%), Positives = 175/375 (46%), Gaps = 12/375 (3%)
Query: 79 VSEVLEW--LRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTA 136
+ EVL + + N + + +LI K G KA ++L M G P+ +
Sbjct: 61 IDEVLRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMITLGCKPNSRTFCL 120
Query: 137 LMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVF--MTLLD 194
L+E Y R A + M+ PSA++Y ++ A ++ MT
Sbjct: 121 LIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTF-- 178
Query: 195 EEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETN--- 251
S LKP+ ++ +I Y G E+AR+L M+ GV YN+++S +
Sbjct: 179 ---SGLKPNVVVYSTLIMGYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGK 235
Query: 252 YKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNI 311
+E S ++Q GL+PD V++ I Y K + EA F+EMLD G+ P + Y +
Sbjct: 236 MEEASTYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTV 295
Query: 312 LLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDG 371
L++ +G + +A ++F+ + PD+ + + + + ++ A K F LK+ G
Sbjct: 296 LINGHFKAGNLMEALSIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKG 355
Query: 372 FVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAV 431
VP+V TY +LI G+ K +EK E++D+M + GI PN I+ ++D K+ D A
Sbjct: 356 LVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRAR 415
Query: 432 VWYKEMESCGFPPDQ 446
+ M G PD
Sbjct: 416 KLFDGMPEKGLEPDS 430
Score = 135 bits (341), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 103/424 (24%), Positives = 192/424 (45%), Gaps = 29/424 (6%)
Query: 99 FLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQ 158
+ +LI + K G+ +A + ++ G P V + +A + + GR + A +F ++
Sbjct: 293 YTVLINGHFKAGNLMEALSIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELK 352
Query: 159 SSGPRPSALTYQIILKLFVEANKFKEAEEVF--MTLLDEEKSPLKPDQKMFHMMIYMYKK 216
G P TY ++ F + + ++A E+ M L + P+ +++ ++ K
Sbjct: 353 EKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCL-----KGIAPNIFIYNALVDGLCK 407
Query: 217 AGGYEKARKLFALMAERGVQQSTVTYNSLM---SFETNYKEVSKIYDQMQRAGLQPDVVS 273
+G ++ARKLF M E+G++ +VTY++++ N E ++ +M G+QP
Sbjct: 408 SGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFV 467
Query: 274 YALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMR 333
Y L++ K E+A+ +F EML G T ++N L+D + S + +A +F+ M
Sbjct: 468 YNALVHGCCKEGDMEKAMNLFREMLQKGFATT-LSFNTLIDGYCKSCKIQEASQLFQEMI 526
Query: 334 RDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQ-----------------DGFVPNV 376
+ PD +YTT++ + A ME A F+ +++ G P+
Sbjct: 527 AKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVFALFEKMVAKGVKPDE 586
Query: 377 ITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKE 436
+TYG +I + K +NL + ++ D++ G+ TI ++ A K +D A E
Sbjct: 587 VTYGLVIYAHCKEDNLVEAFKLRDEVVGKGMLTKGTIHDLLITALCKREDLTEASKLLDE 646
Query: 437 MESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGINGLSISVDEEDDDDD 496
M G P A + L+ A + +EA + P L I + + +D
Sbjct: 647 MGELGLKPSLAACSTLVRSFHEAGKMDEATRVFEGVKSLGLVPDTTTL-IDLVNGNLNDT 705
Query: 497 DDED 500
D ED
Sbjct: 706 DSED 709
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 75/325 (23%), Positives = 134/325 (41%), Gaps = 39/325 (12%)
Query: 157 MQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKK 216
M G P+ TY II A + EA+ +T + +K+ LKPD +I + +
Sbjct: 1 MGEKGLVPNTYTYTIITAGLCRAKRMNEAK---LTFEEMQKTGLKPDYNACSALIDGFMR 57
Query: 217 AGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSKIYDQMQRAGLQPDVVSYAL 276
G + EV +I D M G+ ++++Y +
Sbjct: 58 EG--------------------------------DIDEVLRIKDVMVSCGIPINLITYNV 85
Query: 277 LINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDR 336
LI+ K + E+A + + M+ G +P + + +L++ + + +A + M +
Sbjct: 86 LIHGLCKFGKMEKAAEILKGMITLGCKPNSRTFCLLIEGYCREHNMGRALELLDEMEKRN 145
Query: 337 CSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMM 396
P SY M++ + D+ A K ++ G PNV+ Y TLI GYA +E+
Sbjct: 146 LVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSTLIMGYASEGRIEEAR 205
Query: 397 EIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKA-KNILLSL 455
+ D M +G+ P+ + I+ K + A + E++ G PD +L
Sbjct: 206 RLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAFILGY 265
Query: 456 AKTADERNEA---NELLGNFNHPNN 477
+KT A +E+L + PNN
Sbjct: 266 SKTGKMTEAAKYFDEMLDHGLMPNN 290
>gi|414887035|tpg|DAA63049.1| TPA: crs2 associated factor1 [Zea mays]
Length = 668
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 98/346 (28%), Positives = 177/346 (51%), Gaps = 9/346 (2%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
LI+A+ + + A ++L+ G P + TAL+ A G GR AEA+F +G
Sbjct: 234 LISAFARAALPDAALELLASAQAIGLTPRSNAVTALISALGTAGRVAEAEALFLEFFLAG 293
Query: 162 P-RPSALTYQIILKLFVEANKFKEAEEVFMTLLDE-EKSPLKPDQKMFHMMIYMYKKAGG 219
+P Y +LK +V K AE+V LDE + + PD+ + +++ Y +AG
Sbjct: 294 EIKPRTRAYNALLKGYVRIASLKNAEQV----LDEMSQCGVAPDEATYSLLVDAYTRAGR 349
Query: 220 YEKARKLFALMAERGVQQSTVTYNSLMSF---ETNYKEVSKIYDQMQRAGLQPDVVSYAL 276
+E AR L M GV+ S+ ++ +++ ++++ + +MQ +G++PD Y +
Sbjct: 350 WESARILLKEMEADGVKPSSYVFSRILAGFRDRGDWQKAFAVLREMQASGVRPDRHFYNV 409
Query: 277 LINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDR 336
+I+ +GK A+ F +M + G+ P +N L+DA G D+A +F+ MR
Sbjct: 410 MIDTFGKYNCLGHAMDAFNKMREEGIEPDVVTWNTLIDAHCKGGRHDRAAELFEEMRESN 469
Query: 337 CSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMM 396
C P +Y M++ EG E +K+ G VPN+ITY TL+ Y + ++ +
Sbjct: 470 CPPGTTTYNIMINLLGEQEHWEGVEAMLSEMKEQGLVPNIITYTTLVDVYGRSGRYKEAI 529
Query: 397 EIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGF 442
+ + M+ +G+KP+ T++ +++AY + D A+ K M++ G
Sbjct: 530 DCIEAMKADGLKPSPTMYHALVNAYAQRGLADHALNVVKAMKADGL 575
Score = 162 bits (409), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 94/356 (26%), Positives = 180/356 (50%), Gaps = 6/356 (1%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
L+ Y + AE+VL M++ G AP +++ L++AY R GR+++A + + M++ G
Sbjct: 305 LLKGYVRIASLKNAEQVLDEMSQCGVAPDEATYSLLVDAYTRAGRWESARILLKEMEADG 364
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
+PS+ + IL F + +++A F L + + S ++PD+ +++MI + K
Sbjct: 365 VKPSSYVFSRILAGFRDRGDWQKA---FAVLREMQASGVRPDRHFYNVMIDTFGKYNCLG 421
Query: 222 KARKLFALMAERGVQQSTVTYNSLMSFETN---YKEVSKIYDQMQRAGLQPDVVSYALLI 278
A F M E G++ VT+N+L+ + ++++++M+ + P +Y ++I
Sbjct: 422 HAMDAFNKMREEGIEPDVVTWNTLIDAHCKGGRHDRAAELFEEMRESNCPPGTTTYNIMI 481
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCS 338
N G+ E A+ EM + G+ P Y L+D + SG +A + M+ D
Sbjct: 482 NLLGEQEHWEGVEAMLSEMKEQGLVPNIITYTTLVDVYGRSGRYKEAIDCIEAMKADGLK 541
Query: 339 PDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEI 398
P Y +++AY + A + +K DG +++ +LI + + + + +
Sbjct: 542 PSPTMYHALVNAYAQRGLADHALNVVKAMKADGLEVSILVLNSLINAFGEDRRVVEAFSV 601
Query: 399 YDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLS 454
MR NG++P+ +TT+M A + + FD V Y+EM + G PD+KA+ +L S
Sbjct: 602 LQFMRENGLRPDVITYTTLMKALIRVEQFDKVPVIYEEMITSGCAPDRKARAMLRS 657
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 88/320 (27%), Positives = 169/320 (52%), Gaps = 6/320 (1%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
+E + +L+ AY + G + A +L M G PS + ++ + G ++ A A+
Sbjct: 333 DEATYSLLVDAYTRAGRWESARILLKEMEADGVKPSSYVFSRILAGFRDRGDWQKAFAVL 392
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
R MQ+SG RP Y +++ F + N A + F + +E ++PD ++ +I +
Sbjct: 393 REMQASGVRPDRHFYNVMIDTFGKYNCLGHAMDAFNKMREEG---IEPDVVTWNTLIDAH 449
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYN---SLMSFETNYKEVSKIYDQMQRAGLQPDV 271
K G +++A +LF M E T TYN +L+ + +++ V + +M+ GL P++
Sbjct: 450 CKGGRHDRAAELFEEMRESNCPPGTTTYNIMINLLGEQEHWEGVEAMLSEMKEQGLVPNI 509
Query: 272 VSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKC 331
++Y L++ YG++ R +EA+ E M G++P+ Y+ L++A+A G+ D A V K
Sbjct: 510 ITYTTLVDVYGRSGRYKEAIDCIEAMKADGLKPSPTMYHALVNAYAQRGLADHALNVVKA 569
Query: 332 MRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNN 391
M+ D I ++++A+ + A + ++++G P+VITY TL+K +V
Sbjct: 570 MKADGLEVSILVLNSLINAFGEDRRVVEAFSVLQFMRENGLRPDVITYTTLMKALIRVEQ 629
Query: 392 LEKMMEIYDKMRVNGIKPNQ 411
+K+ IY++M +G P++
Sbjct: 630 FDKVPVIYEEMITSGCAPDR 649
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 75/296 (25%), Positives = 135/296 (45%), Gaps = 4/296 (1%)
Query: 164 PSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKA 223
P +Y +L + +A + L D +S L+PD +F +I + +A + A
Sbjct: 188 PDLASYSHLLASLLNTRDPPDAALLERLLGDLRESRLEPDAPLFSDLISAFARAALPDAA 247
Query: 224 RKLFALMAERGVQQSTVTYNSLMS---FETNYKEVSKIYDQMQRAG-LQPDVVSYALLIN 279
+L A G+ + +L+S E ++ + AG ++P +Y L+
Sbjct: 248 LELLASAQAIGLTPRSNAVTALISALGTAGRVAEAEALFLEFFLAGEIKPRTRAYNALLK 307
Query: 280 AYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSP 339
Y + + A V +EM GV P Y++L+DA+ +G + AR + K M D P
Sbjct: 308 GYVRIASLKNAEQVLDEMSQCGVAPDEATYSLLVDAYTRAGRWESARILLKEMEADGVKP 367
Query: 340 DICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIY 399
++ +L+ + + D + A R ++ G P+ Y +I + K N L M+ +
Sbjct: 368 SSYVFSRILAGFRDRGDWQKAFAVLREMQASGVRPDRHFYNVMIDTFGKYNCLGHAMDAF 427
Query: 400 DKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSL 455
+KMR GI+P+ + T++DA+ K D A ++EM PP NI+++L
Sbjct: 428 NKMREEGIEPDVVTWNTLIDAHCKGGRHDRAAELFEEMRESNCPPGTTTYNIMINL 483
>gi|357130032|ref|XP_003566662.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
distachyon]
Length = 859
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 98/384 (25%), Positives = 188/384 (48%), Gaps = 12/384 (3%)
Query: 74 KKWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVS 133
K N+++E+ +Q + + + + ++ A K +KAE VL M KG P ++
Sbjct: 282 KACNLINEM-----VQKGVEPDVVTYNSIVDALCKARAMDKAELVLRQMVDKGVEPDGLT 336
Query: 134 HTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLL 193
+TA++ Y G +K + +FR+M S G P +T+ + + + K+AEE+F +
Sbjct: 337 YTAIIHGYSCSGHWKESAKMFRKMTSKGLIPGIVTFNSFMSSLCKHGRSKDAEEIFQYMT 396
Query: 194 DEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETN-- 251
+ PD + ++++ Y G + LF MA++G+ + +N L+S
Sbjct: 397 TKGH---MPDLVSYSILLHGYATEGRFADMNNLFHSMADKGIVANCHCFNILISAHAKRG 453
Query: 252 -YKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYN 310
E ++ +MQ G++PDVV+Y+ LI+A+ + R +A+ F +M+ G+ P Y+
Sbjct: 454 MMDEAMLVFTEMQGQGVRPDVVTYSTLISAFCRMGRLADAMEKFSQMISIGLEPNTVVYH 513
Query: 311 ILLDAFAISG-MVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQ 369
L+ F + G +V V + M + P+I +++++ + N + A F +
Sbjct: 514 SLIHGFCMHGDLVKAKELVSEMMSKGIPRPNIVFFSSIIHSLCNEGRVMDAHDVFNLVIH 573
Query: 370 DGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDS 429
G P ++T+ +LI GY V +EK + D M GI+P+ + T++ Y K+ D
Sbjct: 574 IGDRPTIVTFNSLIDGYCLVGKMEKAFGVLDAMVSVGIEPDVVTYNTLVSGYCKSGKIDD 633
Query: 430 AVVWYKEMESCGFPPDQKAKNILL 453
++ ++EM P +I+L
Sbjct: 634 GLILFREMLHKKVKPTTVTYSIVL 657
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 88/305 (28%), Positives = 154/305 (50%), Gaps = 9/305 (2%)
Query: 122 MNKKG--YAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEA 179
M K+G +P VVS ++ + + G A + M G P +TY I+ +A
Sbjct: 253 MAKEGGRCSPDVVSFNTVIHGFFKQGEVSKACNLINEMVQKGVEPDVVTYNSIVDALCKA 312
Query: 180 NKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQST 239
+AE V ++D+ ++PD + +I+ Y +G ++++ K+F M +G+
Sbjct: 313 RAMDKAELVLRQMVDKG---VEPDGLTYTAIIHGYSCSGHWKESAKMFRKMTSKGLIPGI 369
Query: 240 VTYNSLMSFETNY---KEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEE 296
VT+NS MS + K+ +I+ M G PD+VSY++L++ Y R + +F
Sbjct: 370 VTFNSFMSSLCKHGRSKDAEEIFQYMTTKGHMPDLVSYSILLHGYATEGRFADMNNLFHS 429
Query: 297 MLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASD 356
M D G+ +NIL+ A A GM+D+A VF M+ PD+ +Y+T++SA+
Sbjct: 430 MADKGIVANCHCFNILISAHAKRGMMDEAMLVFTEMQGQGVRPDVVTYSTLISAFCRMGR 489
Query: 357 MEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGI-KPNQTIFT 415
+ A + F ++ G PN + Y +LI G+ +L K E+ +M GI +PN F+
Sbjct: 490 LADAMEKFSQMISIGLEPNTVVYHSLIHGFCMHGDLVKAKELVSEMMSKGIPRPNIVFFS 549
Query: 416 TIMDA 420
+I+ +
Sbjct: 550 SIIHS 554
Score = 138 bits (348), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 104/416 (25%), Positives = 183/416 (43%), Gaps = 46/416 (11%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N F +LI+A+ K+G ++A V + M +G P VV+++ L+ A+ R GR +A F
Sbjct: 438 NCHCFNILISAHAKRGMMDEAMLVFTEMQGQGVRPDVVTYSTLISAFCRMGRLADAMEKF 497
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
+M S G P+ + Y ++ F +A+E+ ++ K +P+ F +I+
Sbjct: 498 SQMISIGLEPNTVVYHSLIHGFCMHGDLVKAKELVSEMM--SKGIPRPNIVFFSSIIHSL 555
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSK------IYDQMQRAGLQ 268
G A +F L+ G + + VT+NSL+ Y V K + D M G++
Sbjct: 556 CNEGRVMDAHDVFNLVIHIGDRPTIVTFNSLID---GYCLVGKMEKAFGVLDAMVSVGIE 612
Query: 269 PDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISG-------- 320
PDVV+Y L++ Y K+ + ++ L +F EML V+PT Y+I+LD +G
Sbjct: 613 PDVVTYNTLVSGYCKSGKIDDGLILFREMLHKKVKPTTVTYSIVLDGLFHAGRTSAAKKM 672
Query: 321 ---------------------------MVDQARTVFKCMRRDRCSPDICSYTTMLSAYVN 353
+ D+A T+F + C DI T+++A
Sbjct: 673 FHEMIDSGTAVDIDTYKILLKGLCRNDLTDEAITLFHKLGAMDCKFDITILNTVINALYK 732
Query: 354 ASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTI 413
E A F + G VPNV TYG +I K ++E+ ++ M +G P+ +
Sbjct: 733 VRRREEANDLFAAISTSGLVPNVSTYGVMIHNLLKEGSVEEADTMFSSMEKSGCAPSSRL 792
Query: 414 FTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELL 469
I+ + D A + +++ + ++L+SL + + E + L
Sbjct: 793 LNDIIRMLLQKGDIVKAGYYMSKVDGTIISLEASTTSLLMSLFSSKGKHREQIKFL 848
Score = 135 bits (341), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 92/377 (24%), Positives = 171/377 (45%), Gaps = 7/377 (1%)
Query: 97 MDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRR 156
+ + +I Y G + ++ K+ M KG P +V+ + M + + GR K+AE IF+
Sbjct: 335 LTYTAIIHGYSCSGHWKESAKMFRKMTSKGLIPGIVTFNSFMSSLCKHGRSKDAEEIFQY 394
Query: 157 MQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKK 216
M + G P ++Y I+L + +F + +F ++ D+ + + F+++I + K
Sbjct: 395 MTTKGHMPDLVSYSILLHGYATEGRFADMNNLFHSMADKG---IVANCHCFNILISAHAK 451
Query: 217 AGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSKI---YDQMQRAGLQPDVVS 273
G ++A +F M +GV+ VTY++L+S ++ + QM GL+P+ V
Sbjct: 452 RGMMDEAMLVFTEMQGQGVRPDVVTYSTLISAFCRMGRLADAMEKFSQMISIGLEPNTVV 511
Query: 274 YALLINAYGKARREEEALAVFEEMLDAGV-RPTHKAYNILLDAFAISGMVDQARTVFKCM 332
Y LI+ + +A + EM+ G+ RP ++ ++ + G V A VF +
Sbjct: 512 YHSLIHGFCMHGDLVKAKELVSEMMSKGIPRPNIVFFSSIIHSLCNEGRVMDAHDVFNLV 571
Query: 333 RRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNL 392
P I ++ +++ Y ME A + G P+V+TY TL+ GY K +
Sbjct: 572 IHIGDRPTIVTFNSLIDGYCLVGKMEKAFGVLDAMVSVGIEPDVVTYNTLVSGYCKSGKI 631
Query: 393 EKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNIL 452
+ + ++ +M +KP ++ ++D +A + EM G D IL
Sbjct: 632 DDGLILFREMLHKKVKPTTVTYSIVLDGLFHAGRTSAAKKMFHEMIDSGTAVDIDTYKIL 691
Query: 453 LSLAKTADERNEANELL 469
L D +EA L
Sbjct: 692 LKGLCRNDLTDEAITLF 708
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 89/360 (24%), Positives = 169/360 (46%), Gaps = 12/360 (3%)
Query: 128 AP-SVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAE 186
AP SV ++ LM+ R R A F R+ +G R + LK A + EA
Sbjct: 152 APLSVHTYGILMDCCCRARRPDLGPAFFARLLRAGLRTRTIEANTFLKCLCHAKRTDEAV 211
Query: 187 EVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQS--TVTYNS 244
+V + + + P+ ++ +I ++A + MA+ G + S V++N+
Sbjct: 212 DVLLHRMSDLGC--VPNAISYNTVIKSLCGDSRSQEALDMVQRMAKEGGRCSPDVVSFNT 269
Query: 245 LMSFETNYKEVSK---IYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAG 301
++ EVSK + ++M + G++PDVV+Y +++A KAR ++A V +M+D G
Sbjct: 270 VIHGFFKQGEVSKACNLINEMVQKGVEPDVVTYNSIVDALCKARAMDKAELVLRQMVDKG 329
Query: 302 VRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAE 361
V P Y ++ ++ SG ++ +F+ M P I ++ + +S+ + AE
Sbjct: 330 VEPDGLTYTAIIHGYSCSGHWKESAKMFRKMTSKGLIPGIVTFNSFMSSLCKHGRSKDAE 389
Query: 362 KFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAY 421
+ F+ + G +P++++Y L+ GYA M ++ M GI N F ++ A+
Sbjct: 390 EIFQYMTTKGHMPDLVSYSILLHGYATEGRFADMNNLFHSMADKGIVANCHCFNILISAH 449
Query: 422 GKNKDFDSAVVWYKEMESCGFPPDQKAKNILLS----LAKTADERNEANELLGNFNHPNN 477
K D A++ + EM+ G PD + L+S + + AD + ++++ PN
Sbjct: 450 AKRGMMDEAMLVFTEMQGQGVRPDVVTYSTLISAFCRMGRLADAMEKFSQMISIGLEPNT 509
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 50/231 (21%), Positives = 101/231 (43%), Gaps = 3/231 (1%)
Query: 259 YDQMQRAGLQPDVVSYALLINAYGKARREEEALAVF-EEMLDAGVRPTHKAYNILLDAFA 317
+ ++ RAGL+ + + A+R +EA+ V M D G P +YN ++ +
Sbjct: 179 FARLLRAGLRTRTIEANTFLKCLCHAKRTDEAVDVLLHRMSDLGCVPNAISYNTVIKSLC 238
Query: 318 ISGMVDQARTVFKCMRRD--RCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPN 375
+A + + M ++ RCSPD+ S+ T++ + ++ A + Q G P+
Sbjct: 239 GDSRSQEALDMVQRMAKEGGRCSPDVVSFNTVIHGFFKQGEVSKACNLINEMVQKGVEPD 298
Query: 376 VITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYK 435
V+TY +++ K ++K + +M G++P+ +T I+ Y + + + ++
Sbjct: 299 VVTYNSIVDALCKARAMDKAELVLRQMVDKGVEPDGLTYTAIIHGYSCSGHWKESAKMFR 358
Query: 436 EMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGINGLSI 486
+M S G P N +S +A E+ + P + SI
Sbjct: 359 KMTSKGLIPGIVTFNSFMSSLCKHGRSKDAEEIFQYMTTKGHMPDLVSYSI 409
>gi|224160015|ref|XP_002338159.1| predicted protein [Populus trichocarpa]
gi|222871069|gb|EEF08200.1| predicted protein [Populus trichocarpa]
Length = 368
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 94/313 (30%), Positives = 164/313 (52%), Gaps = 8/313 (2%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
+I K G+ A + M + G P VV+++ ++++ + R A IF M++ G
Sbjct: 16 IINGLCKIGETVAAAGLFKKMGEAGCQPDVVTYSTIIDSLCKDRRVNEALDIFSYMKAKG 75
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKS-PLKPDQKMFHMMIYMYKKAGGY 220
P+ TY +++ ++++EA +L+E S + P+ F ++I ++ K G
Sbjct: 76 ISPNIFTYNSLIQGLCNFSRWREAS----AMLNEMMSLNIMPNIVTFSLLINIFCKEGNV 131
Query: 221 EKARKLFALMAERGVQQSTVTYNSLM---SFETNYKEVSKIYDQMQRAGLQPDVVSYALL 277
+AR + M E GV+ + VTY+SLM S + E K++D M G +PDV SY +L
Sbjct: 132 FEARGVLKTMTEMGVEPNVVTYSSLMNGYSLQAEVFEARKLFDVMITKGCKPDVFSYNIL 191
Query: 278 INAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRC 337
IN Y KA+R EA +F EM+ G+ P +YN L+D G + +A +FK M +
Sbjct: 192 INGYCKAKRIGEAKQLFNEMIHQGLTPDIVSYNTLIDGLCQLGRLREAHDLFKNMLTNGN 251
Query: 338 SPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMME 397
PD+C+Y+ +L + + A + FR ++ PN++ Y LI K NL++ +
Sbjct: 252 LPDLCTYSILLDGFCKQGYLAKAFRLFRAMQSTYLKPNMVMYNILIDAMCKSRNLKEARK 311
Query: 398 IYDKMRVNGIKPN 410
++ ++ V G++PN
Sbjct: 312 LFSELFVQGLQPN 324
Score = 144 bits (364), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 85/351 (24%), Positives = 159/351 (45%), Gaps = 41/351 (11%)
Query: 122 MNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANK 181
M +GY P V ++T ++ + G A +F++M +G +P +TY I+ + +
Sbjct: 1 MVARGYQPDVHTYTTIINGLCKIGETVAAAGLFKKMGEAGCQPDVVTYSTIIDSLCKDRR 60
Query: 182 FKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVT 241
EA ++F Y KA+ G+ + T
Sbjct: 61 VNEALDIF-----------------------------SYMKAK---------GISPNIFT 82
Query: 242 YNSLMSFETNY---KEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEML 298
YNSL+ N+ +E S + ++M + P++V+++LLIN + K EA V + M
Sbjct: 83 YNSLIQGLCNFSRWREASAMLNEMMSLNIMPNIVTFSLLINIFCKEGNVFEARGVLKTMT 142
Query: 299 DAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDME 358
+ GV P Y+ L++ +++ V +AR +F M C PD+ SY +++ Y A +
Sbjct: 143 EMGVEPNVVTYSSLMNGYSLQAEVFEARKLFDVMITKGCKPDVFSYNILINGYCKAKRIG 202
Query: 359 GAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIM 418
A++ F + G P++++Y TLI G ++ L + +++ M NG P+ ++ ++
Sbjct: 203 EAKQLFNEMIHQGLTPDIVSYNTLIDGLCQLGRLREAHDLFKNMLTNGNLPDLCTYSILL 262
Query: 419 DAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELL 469
D + K A ++ M+S P+ NIL+ + EA +L
Sbjct: 263 DGFCKQGYLAKAFRLFRAMQSTYLKPNMVMYNILIDAMCKSRNLKEARKLF 313
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 69/263 (26%), Positives = 121/263 (46%), Gaps = 3/263 (1%)
Query: 230 MAERGVQQSTVTYNSLMSFETNYKEV---SKIYDQMQRAGLQPDVVSYALLINAYGKARR 286
M RG Q TY ++++ E + ++ +M AG QPDVV+Y+ +I++ K RR
Sbjct: 1 MVARGYQPDVHTYTTIINGLCKIGETVAAAGLFKKMGEAGCQPDVVTYSTIIDSLCKDRR 60
Query: 287 EEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTT 346
EAL +F M G+ P YN L+ +A + M P+I +++
Sbjct: 61 VNEALDIFSYMKAKGISPNIFTYNSLIQGLCNFSRWREASAMLNEMMSLNIMPNIVTFSL 120
Query: 347 MLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNG 406
+++ + ++ A + + + G PNV+TY +L+ GY+ + + +++D M G
Sbjct: 121 LINIFCKEGNVFEARGVLKTMTEMGVEPNVVTYSSLMNGYSLQAEVFEARKLFDVMITKG 180
Query: 407 IKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEAN 466
KP+ + +++ Y K K A + EM G PD + N L+ EA+
Sbjct: 181 CKPDVFSYNILINGYCKAKRIGEAKQLFNEMIHQGLTPDIVSYNTLIDGLCQLGRLREAH 240
Query: 467 ELLGNFNHPNNEPGINGLSISVD 489
+L N N P + SI +D
Sbjct: 241 DLFKNMLTNGNLPDLCTYSILLD 263
Score = 95.1 bits (235), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 111/221 (50%), Gaps = 6/221 (2%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + F +LI + K+G+ +A VL M + G P+VV++++LM Y A +F
Sbjct: 114 NIVTFSLLINIFCKEGNVFEARGVLKTMTEMGVEPNVVTYSSLMNGYSLQAEVFEARKLF 173
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
M + G +P +Y I++ + +A + EA+++F ++ + L PD ++ +I
Sbjct: 174 DVMITKGCKPDVFSYNILINGYCKAKRIGEAKQLFNEMIHQ---GLTPDIVSYNTLIDGL 230
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSK---IYDQMQRAGLQPDV 271
+ G +A LF M G TY+ L+ ++K ++ MQ L+P++
Sbjct: 231 CQLGRLREAHDLFKNMLTNGNLPDLCTYSILLDGFCKQGYLAKAFRLFRAMQSTYLKPNM 290
Query: 272 VSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNIL 312
V Y +LI+A K+R +EA +F E+ G++P K + +
Sbjct: 291 VMYNILIDAMCKSRNLKEARKLFSELFVQGLQPNMKHWKLF 331
Score = 48.5 bits (114), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 26/108 (24%), Positives = 51/108 (47%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
LI + G +A + M G P + +++ L++ + + G A +FR MQS+
Sbjct: 226 LIDGLCQLGRLREAHDLFKNMLTNGNLPDLCTYSILLDGFCKQGYLAKAFRLFRAMQSTY 285
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHM 209
+P+ + Y I++ ++ KEA ++F L + P K+F +
Sbjct: 286 LKPNMVMYNILIDAMCKSRNLKEARKLFSELFVQGLQPNMKHWKLFEI 333
>gi|357499959|ref|XP_003620268.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495283|gb|AES76486.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 652
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 103/381 (27%), Positives = 190/381 (49%), Gaps = 6/381 (1%)
Query: 92 WDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAE 151
+ F+++ + LI K G+ A +L ++ P+VV + ++++ + A
Sbjct: 186 FHFDQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVVMYNTIIDSMCKVKLVNEAF 245
Query: 152 AIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMI 211
+F M S G P +TY ++ F K +A ++F ++ E +KPD F++++
Sbjct: 246 DLFSEMISKGISPDVVTYSALISGFCILGKLNDAIDLFNKMILEN---IKPDVYTFNILV 302
Query: 212 YMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSK---IYDQMQRAGLQ 268
+ K G ++ + +F +M ++G++ + VTYNSLM KEV+K I++ M + G+
Sbjct: 303 NAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQGGVN 362
Query: 269 PDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTV 328
PD+ SY+++IN + K ++ +EA+ +F+EM + P Y+ L+D + SG + A +
Sbjct: 363 PDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYALQL 422
Query: 329 FKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAK 388
M P I +Y ++L A ++ A +LK G PN+ TY LIKG +
Sbjct: 423 VDQMHDRGVPPTIRTYNSILDALCKIHQVDKAIALLTKLKDKGIQPNMYTYSILIKGLCQ 482
Query: 389 VNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKA 448
LE ++++ + V G N +T ++ + F+ A+ +ME G PD K
Sbjct: 483 SGKLEDARKVFEGLLVKGHNLNVDTYTIMIQGFCVEGLFNEALALLSKMEDNGCIPDAKT 542
Query: 449 KNILLSLAKTADERNEANELL 469
I++ DE + A +LL
Sbjct: 543 YEIIILSLFKKDENDMAEKLL 563
Score = 152 bits (383), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 91/394 (23%), Positives = 197/394 (50%), Gaps = 10/394 (2%)
Query: 63 VLGTLVRLKQLKKWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFM 122
+LG+LV+ K +S+ +E+ I+ N ++ +LI + + G A V + +
Sbjct: 91 ILGSLVKSKHYHTVLYLSQKMEFRGIKP----NLVNCNILINCFCQLGLIPFAFSVFAKI 146
Query: 123 NKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKF 182
K GY P ++ T L++ G+ + A ++ + G ++Y ++ + +
Sbjct: 147 LKMGYVPDTITFTTLIKGLCLKGQIQQAFLFHDKVVALGFHFDQISYGTLIHGLCKVGET 206
Query: 183 KEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTY 242
+ A ++ + + + ++P+ M++ +I K +A LF+ M +G+ VTY
Sbjct: 207 RAALDLLQRV---DGNLVQPNVVMYNTIIDSMCKVKLVNEAFDLFSEMISKGISPDVVTY 263
Query: 243 NSLMS---FETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLD 299
++L+S + ++++M ++PDV ++ +L+NA+ K + +E VF+ M+
Sbjct: 264 SALISGFCILGKLNDAIDLFNKMILENIKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMK 323
Query: 300 AGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEG 359
G++P YN L+D + + V++A+++F M + +PDI SY+ M++ + +
Sbjct: 324 QGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQGGVNPDIQSYSIMINGFCKIKKFDE 383
Query: 360 AEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMD 419
A F+ + + +P+V+TY +LI G +K + +++ D+M G+ P + +I+D
Sbjct: 384 AMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYALQLVDQMHDRGVPPTIRTYNSILD 443
Query: 420 AYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILL 453
A K D A+ +++ G P+ +IL+
Sbjct: 444 ALCKIHQVDKAIALLTKLKDKGIQPNMYTYSILI 477
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 94/339 (27%), Positives = 166/339 (48%), Gaps = 6/339 (1%)
Query: 113 NKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQII 172
N+A + S M KG +P VV+++AL+ + G+ +A +F +M +P T+ I+
Sbjct: 242 NEAFDLFSEMISKGISPDVVTYSALISGFCILGKLNDAIDLFNKMILENIKPDVYTFNIL 301
Query: 173 LKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAE 232
+ F + K KE + VF ++ K +KP+ ++ ++ Y KA+ +F MA+
Sbjct: 302 VNAFCKDGKMKEGKTVFDMMM---KQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQ 358
Query: 233 RGVQQSTVTYNSLMSFETNYK---EVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEE 289
GV +Y+ +++ K E ++ +M R + PDVV+Y+ LI+ K+ R
Sbjct: 359 GGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISY 418
Query: 290 ALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLS 349
AL + ++M D GV PT + YN +LDA VD+A + ++ P++ +Y+ ++
Sbjct: 419 ALQLVDQMHDRGVPPTIRTYNSILDALCKIHQVDKAIALLTKLKDKGIQPNMYTYSILIK 478
Query: 350 AYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKP 409
+ +E A K F L G NV TY +I+G+ + + + KM NG P
Sbjct: 479 GLCQSGKLEDARKVFEGLLVKGHNLNVDTYTIMIQGFCVEGLFNEALALLSKMEDNGCIP 538
Query: 410 NQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKA 448
+ + I+ + K + D A +EM + G P Q A
Sbjct: 539 DAKTYEIIILSLFKKDENDMAEKLLREMIARGVRPRQIA 577
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 84/372 (22%), Positives = 173/372 (46%), Gaps = 10/372 (2%)
Query: 122 MNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANK 181
M +G P++V+ L+ + + G A ++F ++ G P +T+ ++K +
Sbjct: 111 MEFRGIKPNLVNCNILINCFCQLGLIPFAFSVFAKILKMGYVPDTITFTTLIKGLCLKGQ 170
Query: 182 FKEAEEVFMTLLDEEKSPL--KPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQST 239
++A L ++ L DQ + +I+ K G A L + VQ +
Sbjct: 171 IQQA-----FLFHDKVVALGFHFDQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNV 225
Query: 240 VTYNSLMSFETNYKEVSKIYD---QMQRAGLQPDVVSYALLINAYGKARREEEALAVFEE 296
V YN+++ K V++ +D +M G+ PDVV+Y+ LI+ + + +A+ +F +
Sbjct: 226 VMYNTIIDSMCKVKLVNEAFDLFSEMISKGISPDVVTYSALISGFCILGKLNDAIDLFNK 285
Query: 297 MLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASD 356
M+ ++P +NIL++AF G + + +TVF M + P+ +Y +++ Y +
Sbjct: 286 MILENIKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKE 345
Query: 357 MEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTT 416
+ A+ F + Q G P++ +Y +I G+ K+ ++ M ++ +M I P+ +++
Sbjct: 346 VNKAKSIFNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSS 405
Query: 417 IMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPN 476
++D K+ A+ +M G PP + N +L + ++A LL
Sbjct: 406 LIDGLSKSGRISYALQLVDQMHDRGVPPTIRTYNSILDALCKIHQVDKAIALLTKLKDKG 465
Query: 477 NEPGINGLSISV 488
+P + SI +
Sbjct: 466 IQPNMYTYSILI 477
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 78/361 (21%), Positives = 159/361 (44%), Gaps = 6/361 (1%)
Query: 132 VSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMT 191
+S+++ + +A ++F R+ P A + IL V++ K V
Sbjct: 51 ISYSSTSTTFHSNNDVDDAVSLFNRLLRRNTTPPAFEFNKILGSLVKS---KHYHTVLYL 107
Query: 192 LLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSL---MSF 248
E +KP+ +++I + + G A +FA + + G T+T+ +L +
Sbjct: 108 SQKMEFRGIKPNLVNCNILINCFCQLGLIPFAFSVFAKILKMGYVPDTITFTTLIKGLCL 167
Query: 249 ETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKA 308
+ ++ +D++ G D +SY LI+ K AL + + + V+P
Sbjct: 168 KGQIQQAFLFHDKVVALGFHFDQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVVM 227
Query: 309 YNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLK 368
YN ++D+ +V++A +F M SPD+ +Y+ ++S + + A F ++
Sbjct: 228 YNTIIDSMCKVKLVNEAFDLFSEMISKGISPDVVTYSALISGFCILGKLNDAIDLFNKMI 287
Query: 369 QDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFD 428
+ P+V T+ L+ + K +++ ++D M GIKPN + ++MD Y K+ +
Sbjct: 288 LENIKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVN 347
Query: 429 SAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGINGLSISV 488
A + M G PD ++ +I+++ + +EA L + N P + S +
Sbjct: 348 KAKSIFNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLI 407
Query: 489 D 489
D
Sbjct: 408 D 408
Score = 42.0 bits (97), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 56/115 (48%), Gaps = 5/115 (4%)
Query: 63 VLGTLVRLKQLKKWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFM 122
+L L ++ Q+ K + L+ IQ N + +LI + G A KV +
Sbjct: 441 ILDALCKIHQVDKAIALLTKLKDKGIQP----NMYTYSILIKGLCQSGKLEDARKVFEGL 496
Query: 123 NKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQ-IILKLF 176
KG+ +V ++T +++ + G + A A+ +M+ +G P A TY+ IIL LF
Sbjct: 497 LVKGHNLNVDTYTIMIQGFCVEGLFNEALALLSKMEDNGCIPDAKTYEIIILSLF 551
>gi|83744088|gb|ABC42330.1| PPR protein [Oryza sativa Indica Group]
Length = 791
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 112/433 (25%), Positives = 197/433 (45%), Gaps = 54/433 (12%)
Query: 68 VRLKQLKKWNVVSEVLEWLRIQS-----WWDFNEMDFLMLITAYGKQGD----------- 111
+ LK L N E LE L + + + + + +I + K+GD
Sbjct: 163 ILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFKEGDSDKAYSTYHEM 222
Query: 112 ------------------------FNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRY 147
+KA +VL+ M K G P +++ +++ Y G+
Sbjct: 223 LDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQP 282
Query: 148 KNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMF 207
K A ++M+S G P +TY +++ + + EA ++F ++ K LKP+ +
Sbjct: 283 KEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSM---TKRGLKPEITTY 339
Query: 208 HMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSK---IYDQMQR 264
++ Y G + L LM G+ ++ L+ N +V + ++ +M++
Sbjct: 340 GTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYANQGKVDQAMLVFSKMRQ 399
Query: 265 AGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQ 324
GL P+ V+Y +I K+ R E+A+ FE+M+D G+ P + YN L+ ++
Sbjct: 400 QGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWER 459
Query: 325 ARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEG----AEKFFRRLKQDGFVPNVITYG 380
A + M DR IC T ++ +++ EG +EK F + + G PNVITY
Sbjct: 460 AEELILEM-LDR---GICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYN 515
Query: 381 TLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESC 440
TLI GY +++ M++ M G+KPN ++T+++ Y K + A+V +KEMES
Sbjct: 516 TLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESS 575
Query: 441 GFPPDQKAKNILL 453
G PD NI+L
Sbjct: 576 GVSPDIITYNIIL 588
Score = 152 bits (384), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 93/390 (23%), Positives = 176/390 (45%), Gaps = 41/390 (10%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
+I A K +KA +VL+ M K G P +++ +++ Y G+ K A ++M+S G
Sbjct: 237 IIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDG 296
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
P +TY +++ + + EA ++F ++ K LKP+ + ++ Y G
Sbjct: 297 VEPDVVTYSLLMDYLCKNGRCMEARKIFDSM---TKRGLKPEITTYGTLLQGYATKGALV 353
Query: 222 KARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSK---IYDQMQRAGLQPDVVSYALLI 278
+ L LM G+ ++ L+ N +V + ++ +M++ GL P+ V+Y +I
Sbjct: 354 EMHGLLDLMVRNGIHPDHYVFSILICAYANQGKVDQAMLVFSKMRQQGLNPNAVTYGAVI 413
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILL------------------------- 313
K+ R E+A+ FE+M+D G+ P + YN L+
Sbjct: 414 GILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGIC 473
Query: 314 ----------DAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKF 363
D+ G V ++ +F+ M R P++ +Y T+++ Y A M+ A K
Sbjct: 474 LNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKL 533
Query: 364 FRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGK 423
+ G PN +TY TLI GY K++ +E + ++ +M +G+ P+ + I+ +
Sbjct: 534 LSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQ 593
Query: 424 NKDFDSAVVWYKEMESCGFPPDQKAKNILL 453
+ +A Y + G + NI+L
Sbjct: 594 TRRTAAAKELYVRITESGTQIELSTYNIIL 623
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 99/378 (26%), Positives = 176/378 (46%), Gaps = 12/378 (3%)
Query: 111 DFNKAEKVLSFMN------KKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRP 164
D N++++ L ++ G P VVS+T ++ + + G A + + M G P
Sbjct: 170 DENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRGILP 229
Query: 165 SALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKAR 224
+TY I+ +A +A EV T++ K+ + PD ++ +++ Y +G ++A
Sbjct: 230 DVVTYNSIIAALCKAQAMDKAMEVLNTMV---KNGVMPDCMTYNSILHGYCSSGQPKEAI 286
Query: 225 KLFALMAERGVQQSTVTYNSLMSFETN---YKEVSKIYDQMQRAGLQPDVVSYALLINAY 281
M GV+ VTY+ LM + E KI+D M + GL+P++ +Y L+ Y
Sbjct: 287 GFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGY 346
Query: 282 GKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDI 341
E + + M+ G+ P H ++IL+ A+A G VDQA VF MR+ +P+
Sbjct: 347 ATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYANQGKVDQAMLVFSKMRQQGLNPNA 406
Query: 342 CSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDK 401
+Y ++ + +E A +F ++ +G P I Y +LI G N E+ E+ +
Sbjct: 407 VTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILE 466
Query: 402 MRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADE 461
M GI N F +I+D++ K + ++ M G P+ N L++ A +
Sbjct: 467 MLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGK 526
Query: 462 RNEANELLGNFNHPNNEP 479
+EA +LL +P
Sbjct: 527 MDEAMKLLSGMVSVGLKP 544
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 83/347 (23%), Positives = 165/347 (47%), Gaps = 6/347 (1%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
L+ Y +G + +L M + G P + L+ AY G+ A +F +M+ G
Sbjct: 342 LLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYANQGKVDQAMLVFSKMRQQG 401
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
P+A+TY ++ + ++ + ++A F ++DE L P +++ +I+ +E
Sbjct: 402 LNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDE---GLSPGNIVYNSLIHGLCTCNKWE 458
Query: 222 KARKLFALMAERGVQQSTVTYNSLM---SFETNYKEVSKIYDQMQRAGLQPDVVSYALLI 278
+A +L M +RG+ +T+ +NS++ E E K+++ M R G++P+V++Y LI
Sbjct: 459 RAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLI 518
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCS 338
N Y A + +EA+ + M+ G++P Y+ L++ + ++ A +FK M S
Sbjct: 519 NGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVS 578
Query: 339 PDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEI 398
PDI +Y +L A++ + R+ + G + TY ++ G K + +++
Sbjct: 579 PDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALQM 638
Query: 399 YDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPD 445
+ + + +K F ++DA K D A + S G P+
Sbjct: 639 FQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPN 685
Score = 138 bits (348), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 92/346 (26%), Positives = 152/346 (43%), Gaps = 33/346 (9%)
Query: 101 MLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNA-EAIFRRMQS 159
+LI + G + L + KKG+ ++ T L++ R +A + + RRM
Sbjct: 92 ILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTE 151
Query: 160 SGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGG 219
G P+ +Y I+LK + N+ +EA E+ + D+ PD + +I + K G
Sbjct: 152 LGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFKEGD 211
Query: 220 YEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSKIYDQMQRAGLQPDVVSYALLIN 279
+KA + M +RG+ PDVV+Y +I
Sbjct: 212 SDKAYSTYHEMLDRGIL--------------------------------PDVVTYNSIIA 239
Query: 280 AYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSP 339
A KA+ ++A+ V M+ GV P YN +L + SG +A K MR D P
Sbjct: 240 ALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEP 299
Query: 340 DICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIY 399
D+ +Y+ ++ A K F + + G P + TYGTL++GYA L +M +
Sbjct: 300 DVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLL 359
Query: 400 DKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPD 445
D M NGI P+ +F+ ++ AY D A++ + +M G P+
Sbjct: 360 DLMVRNGIHPDHYVFSILICAYANQGKVDQAMLVFSKMRQQGLNPN 405
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 86/386 (22%), Positives = 172/386 (44%), Gaps = 12/386 (3%)
Query: 97 MDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRR 156
MD+L K G +A K+ M K+G P + ++ L++ Y G +
Sbjct: 308 MDYLC------KNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDL 361
Query: 157 MQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKK 216
M +G P + I++ + K +A VF + + L P+ + +I + K
Sbjct: 362 MVRNGIHPDHYVFSILICAYANQGKVDQAMLVFSKM---RQQGLNPNAVTYGAVIGILCK 418
Query: 217 AGGYEKARKLFALMAERGVQQSTVTYNSL---MSFETNYKEVSKIYDQMQRAGLQPDVVS 273
+G E A F M + G+ + YNSL + ++ ++ +M G+ + +
Sbjct: 419 SGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIF 478
Query: 274 YALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMR 333
+ +I+++ K R E+ +FE M+ GV+P YN L++ + ++G +D+A + M
Sbjct: 479 FNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMV 538
Query: 334 RDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLE 393
P+ +Y+T+++ Y S ME A F+ ++ G P++ITY +++G +
Sbjct: 539 SVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTA 598
Query: 394 KMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILL 453
E+Y ++ +G + + + I+ KNK D A+ ++ + + + NI++
Sbjct: 599 AAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMI 658
Query: 454 SLAKTADERNEANELLGNFNHPNNEP 479
+EA +L F+ P
Sbjct: 659 DALLKVGRNDEAKDLFVAFSSNGLVP 684
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 101/398 (25%), Positives = 176/398 (44%), Gaps = 41/398 (10%)
Query: 59 PKDLVLGTLVRLKQLKKWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKV 118
P+ GTL++ K V L L +++ + F +LI AY QG ++A V
Sbjct: 334 PEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYANQGKVDQAMLV 393
Query: 119 LSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVE 178
S M ++G P+ V++ A++ + GR ++A F +M G P + Y ++
Sbjct: 394 FSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCT 453
Query: 179 ANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQS 238
NK++ AEE+ + +LD + + F+ +I + K G ++ KLF LM GV+ +
Sbjct: 454 CNKWERAEELILEMLDR---GICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPN 510
Query: 239 TVTYNSLM---SFETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFE 295
+TYN+L+ E K+ M GL+P+ V+Y+ LIN Y K R E+AL +F+
Sbjct: 511 VITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFK 570
Query: 296 EMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFK---------------------C--- 331
EM +GV P YNI+L + A+ ++ C
Sbjct: 571 EMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNK 630
Query: 332 -------MRRDRCSPDIC----SYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYG 380
M ++ C D+ ++ M+ A + + A+ F +G VPN TY
Sbjct: 631 LTDDALQMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYR 690
Query: 381 TLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIM 418
+ + LE++ +++ M NG + + I+
Sbjct: 691 LMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIV 728
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 68/278 (24%), Positives = 116/278 (41%), Gaps = 46/278 (16%)
Query: 221 EKARKLFALMAERGVQQSTVTYNSLMS---FETNYKEVSKIYDQMQRAG---LQPDVVSY 274
E AR +F + RG S N ++ ++ VS+ Y++M RAG + PD+ +Y
Sbjct: 32 EDARHVFDELLRRGRGASIYGLNRALADVARDSPAAAVSR-YNRMARAGADEVTPDLCTY 90
Query: 275 ALLINAYGKARREEEALA------------------------------------VFEEML 298
+LI +A R + A V M
Sbjct: 91 GILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMT 150
Query: 299 DAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDR---CSPDICSYTTMLSAYVNAS 355
+ G P +YNILL +A + M DR PD+ SYTT+++ +
Sbjct: 151 ELGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFKEG 210
Query: 356 DMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFT 415
D + A + + G +P+V+TY ++I K ++K ME+ + M NG+ P+ +
Sbjct: 211 DSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYN 270
Query: 416 TIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILL 453
+I+ Y + A+ + K+M S G PD ++L+
Sbjct: 271 SILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLM 308
>gi|356540375|ref|XP_003538665.1| PREDICTED: pentatricopeptide repeat-containing protein At3g18110,
chloroplastic-like [Glycine max]
Length = 1476
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 114/405 (28%), Positives = 208/405 (51%), Gaps = 23/405 (5%)
Query: 75 KWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDF--NKAEKVLSFMNKKGYAPSVV 132
+++ V E+L+ +R + + + F LI A K G N A ++L+ + + G P ++
Sbjct: 264 RFSKVKELLDLMRERGCVP-DLVSFNTLINARMKSGAMEPNLALQLLNEVRRSGIRPDII 322
Query: 133 SHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTL 192
++ L+ A R + A A+F M+S +P TY ++ ++ + ++AEE+F L
Sbjct: 323 TYNTLISACSRESNLEEAVAVFSDMESHRCQPDLWTYNAMISVYGRCARARKAEELFKEL 382
Query: 193 LDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSF---E 249
E PD ++ ++Y + + G EK R + M +RG Q +TYN+++ +
Sbjct: 383 ---ESKGFFPDAVTYNSLLYAFSREGNTEKVRDICEEMVKRGFGQDEMTYNTIIHMYGKQ 439
Query: 250 TNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAY 309
+ + +IY M+ +G PD V+Y +LI++ GKA + EEA V EMLDAGV+PT Y
Sbjct: 440 GRHDQAMQIYRDMKSSGRNPDAVTYTVLIDSLGKASKVEEAANVMSEMLDAGVKPTLHTY 499
Query: 310 NILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQ 369
+ L+ A+A +G ++A F CMRR PD +Y+ ML ++ ++M+ A + + +
Sbjct: 500 SALICAYAKAGKREEAEETFNCMRRSGIKPDRLAYSVMLDFFLRFNEMKKAMGLYHEMIR 559
Query: 370 DGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKM-----RVNGIKPNQTIFTTIMDAYGKN 424
+GF P+ Y ++ + E M ++ D++ ++G+ P Q I + ++ K
Sbjct: 560 EGFTPDNGLYEVMMHALVR----ENMWDVVDRIIRDMEELSGMNP-QVISSVLV----KG 610
Query: 425 KDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELL 469
+D A K S G+ D + ++S ++ +EA ELL
Sbjct: 611 GCYDHAAKMLKVAISNGYELDHEIFLSIMSSYSSSARYSEACELL 655
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 102/439 (23%), Positives = 198/439 (45%), Gaps = 24/439 (5%)
Query: 29 KNWRRLMNQIEEVGSAVAVLRSER--------TRGQPLPKDLVLGTLVRLKQLKKWNVVS 80
KNWR +++ + + L+SE R Q P D +V+ + W
Sbjct: 145 KNWR---ERVKYLTDTILALKSEEFVAGVLEERRVQMTPTDFCF--VVKWVGQQNWQRAL 199
Query: 81 EVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNK--KGYAPSVVSHTALM 138
E+ E L ++ W+ N M+ T G G N+ + + +V + A+M
Sbjct: 200 ELYECLNLRHWYAPNAR---MVATILGVLGKANQEALAVEIFARAESSVGDTVQVYNAMM 256
Query: 139 EAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDE-EK 197
Y R GR+ + + M+ G P +++ ++ +++ + + + LL+E +
Sbjct: 257 GVYARNGRFSKVKELLDLMRERGCVPDLVSFNTLINARMKSGAMEP--NLALQLLNEVRR 314
Query: 198 SPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFE---TNYKE 254
S ++PD ++ +I + E+A +F+ M Q TYN+++S ++
Sbjct: 315 SGIRPDIITYNTLISACSRESNLEEAVAVFSDMESHRCQPDLWTYNAMISVYGRCARARK 374
Query: 255 VSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLD 314
+++ +++ G PD V+Y L+ A+ + E+ + EEM+ G YN ++
Sbjct: 375 AEELFKELESKGFFPDAVTYNSLLYAFSREGNTEKVRDICEEMVKRGFGQDEMTYNTIIH 434
Query: 315 AFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVP 374
+ G DQA +++ M+ +PD +YT ++ + AS +E A + G P
Sbjct: 435 MYGKQGRHDQAMQIYRDMKSSGRNPDAVTYTVLIDSLGKASKVEEAANVMSEMLDAGVKP 494
Query: 375 NVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWY 434
+ TY LI YAK E+ E ++ MR +GIKP++ ++ ++D + + + A+ Y
Sbjct: 495 TLHTYSALICAYAKAGKREEAEETFNCMRRSGIKPDRLAYSVMLDFFLRFNEMKKAMGLY 554
Query: 435 KEMESCGFPPDQKAKNILL 453
EM GF PD +++
Sbjct: 555 HEMIREGFTPDNGLYEVMM 573
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 98/401 (24%), Positives = 176/401 (43%), Gaps = 7/401 (1%)
Query: 72 QLKKWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSV 131
+LK W ++ LR Q + + LI AY G + +A + + M + G +P+V
Sbjct: 786 KLKIWQKAESLVGSLR-QRCSKMDRKVWNALIHAYAFSGCYERARAIFNTMMRDGPSPTV 844
Query: 132 VSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMT 191
S L++A R + + +Q G + S + + L+ F +A E ++++
Sbjct: 845 DSVNGLLQALIVDRRLNELYVVIQELQDMGLKISKSSILLTLEAFAQAGNLFEVQKIYNG 904
Query: 192 LLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFET- 250
+ + + P ++ +M+ + K + M E G Q NS++
Sbjct: 905 M---KAAGYFPTMHVYRIMLRLLCKCKRVRDVETMLCEMEEAGFQPDLQICNSILKLYLG 961
Query: 251 --NYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKA 308
++K + IY ++Q A L+PD +Y LI Y + RR EE ++ +M G+ P
Sbjct: 962 IEDFKSMGIIYQKIQDASLKPDEETYNTLIIMYCRDRRPEEGFSLMNKMRSLGLEPKLDT 1021
Query: 309 YNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLK 368
Y L+ AF M +QA +F+ +R + D Y M+ Y + D AE +K
Sbjct: 1022 YRSLITAFNKQRMYEQAEELFEELRSNGYKLDRAFYHLMMKTYRTSGDHRKAENLLAIMK 1081
Query: 369 QDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFD 428
+ G P + T L+ Y K E+ + +R G+ + +++++DAY K DF
Sbjct: 1082 ESGIEPTISTMHLLMVSYGKSGQPEEAENVLKNLRTTGVVLDTLPYSSVIDAYLKKGDFK 1141
Query: 429 SAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELL 469
+ + EM+ G PD + + A ++ NEA LL
Sbjct: 1142 AGIEKLTEMKEAGIEPDHRIWTCFIRAATLSEGTNEAIVLL 1182
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 84/271 (30%), Positives = 140/271 (51%), Gaps = 7/271 (2%)
Query: 202 PDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETN---YKEVSKI 258
P+ +M ++ + KA A ++FA AE V + YN++M + +V ++
Sbjct: 213 PNARMVATILGVLGKANQEALAVEIFA-RAESSVGDTVQVYNAMMGVYARNGRFSKVKEL 271
Query: 259 YDQMQRAGLQPDVVSYALLINAYGKARREEE--ALAVFEEMLDAGVRPTHKAYNILLDAF 316
D M+ G PD+VS+ LINA K+ E AL + E+ +G+RP YN L+ A
Sbjct: 272 LDLMRERGCVPDLVSFNTLINARMKSGAMEPNLALQLLNEVRRSGIRPDIITYNTLISAC 331
Query: 317 AISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNV 376
+ +++A VF M RC PD+ +Y M+S Y + AE+ F+ L+ GF P+
Sbjct: 332 SRESNLEEAVAVFSDMESHRCQPDLWTYNAMISVYGRCARARKAEELFKELESKGFFPDA 391
Query: 377 ITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKE 436
+TY +L+ +++ N EK+ +I ++M G ++ + TI+ YGK D A+ Y++
Sbjct: 392 VTYNSLLYAFSREGNTEKVRDICEEMVKRGFGQDEMTYNTIIHMYGKQGRHDQAMQIYRD 451
Query: 437 MESCGFPPDQKAKNILL-SLAKTADERNEAN 466
M+S G PD +L+ SL K + AN
Sbjct: 452 MKSSGRNPDAVTYTVLIDSLGKASKVEEAAN 482
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 84/333 (25%), Positives = 156/333 (46%), Gaps = 13/333 (3%)
Query: 164 PSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKA 223
P+A IL + +AN+ A E+F +S + ++++ M+ +Y + G + K
Sbjct: 213 PNARMVATILGVLGKANQEALAVEIFA----RAESSVGDTVQVYNAMMGVYARNGRFSKV 268
Query: 224 RKLFALMAERGVQQSTVTYNSLM-------SFETNYKEVSKIYDQMQRAGLQPDVVSYAL 276
++L LM ERG V++N+L+ + E N ++ ++++R+G++PD+++Y
Sbjct: 269 KELLDLMRERGCVPDLVSFNTLINARMKSGAMEPNL--ALQLLNEVRRSGIRPDIITYNT 326
Query: 277 LINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDR 336
LI+A + EEA+AVF +M +P YN ++ + +A +FK +
Sbjct: 327 LISACSRESNLEEAVAVFSDMESHRCQPDLWTYNAMISVYGRCARARKAEELFKELESKG 386
Query: 337 CSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMM 396
PD +Y ++L A+ + E + + GF + +TY T+I Y K ++ M
Sbjct: 387 FFPDAVTYNSLLYAFSREGNTEKVRDICEEMVKRGFGQDEMTYNTIIHMYGKQGRHDQAM 446
Query: 397 EIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLA 456
+IY M+ +G P+ +T ++D+ GK + A EM G P + L+
Sbjct: 447 QIYRDMKSSGRNPDAVTYTVLIDSLGKASKVEEAANVMSEMLDAGVKPTLHTYSALICAY 506
Query: 457 KTADERNEANELLGNFNHPNNEPGINGLSISVD 489
A +R EA E +P S+ +D
Sbjct: 507 AKAGKREEAEETFNCMRRSGIKPDRLAYSVMLD 539
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 83/380 (21%), Positives = 175/380 (46%), Gaps = 39/380 (10%)
Query: 63 VLGTLVRLKQLKKWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFM 122
+L L+ ++L + VV + L+ + ++ ++ L+ + A+ + G+ + +K+ + M
Sbjct: 850 LLQALIVDRRLNELYVVIQELQDMGLK----ISKSSILLTLEAFAQAGNLFEVQKIYNGM 905
Query: 123 NKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKF 182
GY P++ + ++ + R ++ E + M+ +G +P ILKL++ F
Sbjct: 906 KAAGYFPTMHVYRIMLRLLCKCKRVRDVETMLCEMEEAGFQPDLQICNSILKLYLGIEDF 965
Query: 183 KEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTY 242
K ++ + D + LKPD++ ++ +I MY + E+ F+LM
Sbjct: 966 KSMGIIYQKIQD---ASLKPDEETYNTLIIMYCRDRRPEEG---FSLM------------ 1007
Query: 243 NSLMSFETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGV 302
++M+ GL+P + +Y LI A+ K R E+A +FEE+ G
Sbjct: 1008 -----------------NKMRSLGLEPKLDTYRSLITAFNKQRMYEQAEELFEELRSNGY 1050
Query: 303 RPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEK 362
+ Y++++ + SG +A + M+ P I + ++ +Y + E AE
Sbjct: 1051 KLDRAFYHLMMKTYRTSGDHRKAENLLAIMKESGIEPTISTMHLLMVSYGKSGQPEEAEN 1110
Query: 363 FFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYG 422
+ L+ G V + + Y ++I Y K + + +E +M+ GI+P+ I+T + A
Sbjct: 1111 VLKNLRTTGVVLDTLPYSSVIDAYLKKGDFKAGIEKLTEMKEAGIEPDHRIWTCFIRAAT 1170
Query: 423 KNKDFDSAVVWYKEMESCGF 442
++ + A+V ++ GF
Sbjct: 1171 LSEGTNEAIVLLNALQDAGF 1190
Score = 102 bits (253), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 82/380 (21%), Positives = 168/380 (44%), Gaps = 8/380 (2%)
Query: 112 FNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGP--RPSALTY 169
F+ A ++ S M G S + ++ Y R + A + + +G Y
Sbjct: 718 FDVASQIFSDMRFNGVESSECLYQGMVSVYCRMDLPETAHHLLYHAEKNGIILDNDISVY 777
Query: 170 QIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFAL 229
I++ + + +++AE + +L + K D+K+++ +I+ Y +G YE+AR +F
Sbjct: 778 IDIVETYGKLKIWQKAESLVGSL---RQRCSKMDRKVWNALIHAYAFSGCYERARAIFNT 834
Query: 230 MAERGVQQSTVTYNSLMS---FETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARR 286
M G + + N L+ + E+ + ++Q GL+ S L + A+ +A
Sbjct: 835 MMRDGPSPTVDSVNGLLQALIVDRRLNELYVVIQELQDMGLKISKSSILLTLEAFAQAGN 894
Query: 287 EEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTT 346
E ++ M AG PT Y I+L V T+ M PD+ +
Sbjct: 895 LFEVQKIYNGMKAAGYFPTMHVYRIMLRLLCKCKRVRDVETMLCEMEEAGFQPDLQICNS 954
Query: 347 MLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNG 406
+L Y+ D + +++++ P+ TY TLI Y + E+ + +KMR G
Sbjct: 955 ILKLYLGIEDFKSMGIIYQKIQDASLKPDEETYNTLIIMYCRDRRPEEGFSLMNKMRSLG 1014
Query: 407 IKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEAN 466
++P + +++ A+ K + ++ A ++E+ S G+ D+ ++++ +T+ + +A
Sbjct: 1015 LEPKLDTYRSLITAFNKQRMYEQAEELFEELRSNGYKLDRAFYHLMMKTYRTSGDHRKAE 1074
Query: 467 ELLGNFNHPNNEPGINGLSI 486
LL EP I+ + +
Sbjct: 1075 NLLAIMKESGIEPTISTMHL 1094
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 88/409 (21%), Positives = 171/409 (41%), Gaps = 44/409 (10%)
Query: 97 MDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRR 156
+ + +LI + GK +A V+S M G P++ +++AL+ AY + G+ + AE F
Sbjct: 462 VTYTVLIDSLGKASKVEEAANVMSEMLDAGVKPTLHTYSALICAYAKAGKREEAEETFNC 521
Query: 157 MQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIY---- 212
M+ SG +P L Y ++L F+ N+ K+A ++ ++ E PD ++ +M++
Sbjct: 522 MRRSGIKPDRLAYSVMLDFFLRFNEMKKAMGLYHEMIREG---FTPDNGLYEVMMHALVR 578
Query: 213 ---------------------------MYKKAGGYEKARKLFALMAERGVQ---QSTVTY 242
+ K G Y+ A K+ + G + + ++
Sbjct: 579 ENMWDVVDRIIRDMEELSGMNPQVISSVLVKGGCYDHAAKMLKVAISNGYELDHEIFLSI 638
Query: 243 NSLMSFETNYKEVSKIYD-QMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAG 301
S S Y E ++ + + A +++ AL+I KA++ + AL + + G
Sbjct: 639 MSSYSSSARYSEACELLEFSREHAPNDIQMITEALII-ILCKAKKLDAALEEYRSKGELG 697
Query: 302 VRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAE 361
+ Y L+ + + D A +F MR + C Y M+S Y E A
Sbjct: 698 QFRSCTMYESLIQECIQNELFDVASQIFSDMRFNGVESSECLYQGMVSVYCRMDLPETAH 757
Query: 362 KFFRRLKQDGFV--PNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMD 419
+++G + ++ Y +++ Y K+ +K + +R K ++ ++ ++
Sbjct: 758 HLLYHAEKNGIILDNDISVYIDIVETYGKLKIWQKAESLVGSLRQRCSKMDRKVWNALIH 817
Query: 420 AYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANEL 468
AY + ++ A + M G P + N LL A D R NEL
Sbjct: 818 AYAFSGCYERARAIFNTMMRDGPSPTVDSVNGLLQ-ALIVDRR--LNEL 863
>gi|115461420|ref|NP_001054310.1| Os04g0684500 [Oryza sativa Japonica Group]
gi|113565881|dbj|BAF16224.1| Os04g0684500 [Oryza sativa Japonica Group]
Length = 901
Score = 163 bits (412), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 101/395 (25%), Positives = 187/395 (47%), Gaps = 43/395 (10%)
Query: 98 DFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRM 157
+F ++I Y K+GD + A M +G P+ T+L+ AY + A + M
Sbjct: 266 EFGLMIVYYAKRGDKHHARATFENMRARGIEPNAFVFTSLVHAYAVARDMRGALSCVEEM 325
Query: 158 QSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKP-DQKMFHMMIYMYKK 216
+S G + +TY I++ F + N + A+ +F E K+ L + ++ +I+ + +
Sbjct: 326 KSEGLELTIVTYSILISGFAKINDSQSADNLF----KEAKTKLSSLNGIIYSNIIHAHCQ 381
Query: 217 AGGYEKARKLFALMAERGVQQSTVTYNSLMSFET---NYKEVSKIYDQMQRAGLQPDVVS 273
+G E+A +L M E G+ Y+S+M T N + ++++++ G +P ++S
Sbjct: 382 SGNMERAEELVREMEEDGIDAPIDVYHSMMHGYTIIQNENKCLVVFERLKECGFKPSIIS 441
Query: 274 YALLINAYGKARREEEAL-----------------------------------AVFEEML 298
Y L+N Y K + +AL A+FEEML
Sbjct: 442 YGCLLNLYVKIGKVAKALSISKEMESCGIKHNNKTYSMLINGFIHLHDFANAFAIFEEML 501
Query: 299 DAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDME 358
+G++P YN+L++AF G +D+A + + M+++R P ++ ++ Y A DM+
Sbjct: 502 RSGLQPDRAIYNLLIEAFCKMGNMDRAICILEKMQKERMQPSNRAFRPIIEGYAVAGDMK 561
Query: 359 GAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIM 418
A +++ G VP V+TY LI G + + +++ + + DKM + GI PN+ +T IM
Sbjct: 562 SALDTLDLMRRSGCVPTVMTYNALIHGLVRKHKVQRAVSVLDKMSIAGITPNEHTYTIIM 621
Query: 419 DAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILL 453
Y + D A ++ +++ G D LL
Sbjct: 622 RGYAASGDIGKAFEYFTKIKESGLKLDVYIYETLL 656
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 88/380 (23%), Positives = 181/380 (47%), Gaps = 41/380 (10%)
Query: 113 NKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQII 172
NK V + + G+ PS++S+ L+ Y + G+ A +I + M+S G + + TY ++
Sbjct: 421 NKCLVVFERLKECGFKPSIISYGCLLNLYVKIGKVAKALSISKEMESCGIKHNNKTYSML 480
Query: 173 LKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAE 232
+ F+ + F A +F +L +S L+PD+ +++++I + K G ++A + M +
Sbjct: 481 INGFIHLHDFANAFAIFEEML---RSGLQPDRAIYNLLIEAFCKMGNMDRAICILEKMQK 537
Query: 233 RGVQQSTVTYNSLM---SFETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEE 289
+Q S + ++ + + K D M+R+G P V++Y LI+ + + +
Sbjct: 538 ERMQPSNRAFRPIIEGYAVAGDMKSALDTLDLMRRSGCVPTVMTYNALIHGLVRKHKVQR 597
Query: 290 ALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLS 349
A++V ++M AG+ P Y I++ +A SG + +A F ++ D+ Y T+L
Sbjct: 598 AVSVLDKMSIAGITPNEHTYTIIMRGYAASGDIGKAFEYFTKIKESGLKLDVYIYETLLR 657
Query: 350 AYVNASDMEGA-----------------------------------EKFFRRLKQDGFVP 374
A + M+ A E +++K+DG P
Sbjct: 658 ACCKSGRMQSALAVTREMSFQKIPRNTFIYNILIDGWARRGDVWEAEDLMKQMKEDGVPP 717
Query: 375 NVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWY 434
N+ TY + I K ++++ ++ ++M G+KPN +TT++ + + D A+ +
Sbjct: 718 NIHTYTSYINACCKAGDMQRAEKVIEEMVDVGLKPNVKTYTTLIKGWARVSLPDRALKCF 777
Query: 435 KEMESCGFPPDQKAKNILLS 454
+EM+ G PD+ + + L++
Sbjct: 778 EEMKLAGLKPDEASYHCLVT 797
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 97/361 (26%), Positives = 179/361 (49%), Gaps = 10/361 (2%)
Query: 63 VLGTLVRLKQLKKWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFM 122
+L V++ ++ K +S+ +E I+ N + MLI + DF A + M
Sbjct: 445 LLNLYVKIGKVAKALSISKEMESCGIKH----NNKTYSMLINGFIHLHDFANAFAIFEEM 500
Query: 123 NKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKF 182
+ G P + L+EA+ + G A I +MQ +PS ++ I++ + A
Sbjct: 501 LRSGLQPDRAIYNLLIEAFCKMGNMDRAICILEKMQKERMQPSNRAFRPIIEGYAVAGDM 560
Query: 183 KEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTY 242
K A + TL +S P ++ +I+ + ++A + M+ G+ + TY
Sbjct: 561 KSALD---TLDLMRRSGCVPTVMTYNALIHGLVRKHKVQRAVSVLDKMSIAGITPNEHTY 617
Query: 243 NSLMSFETNYKEVSKIYD---QMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLD 299
+M ++ K ++ +++ +GL+ DV Y L+ A K+ R + ALAV EM
Sbjct: 618 TIIMRGYAASGDIGKAFEYFTKIKESGLKLDVYIYETLLRACCKSGRMQSALAVTREMSF 677
Query: 300 AGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEG 359
+ YNIL+D +A G V +A + K M+ D P+I +YT+ ++A A DM+
Sbjct: 678 QKIPRNTFIYNILIDGWARRGDVWEAEDLMKQMKEDGVPPNIHTYTSYINACCKAGDMQR 737
Query: 360 AEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMD 419
AEK + G PNV TY TLIKG+A+V+ ++ ++ +++M++ G+KP++ + ++
Sbjct: 738 AEKVIEEMVDVGLKPNVKTYTTLIKGWARVSLPDRALKCFEEMKLAGLKPDEASYHCLVT 797
Query: 420 A 420
+
Sbjct: 798 S 798
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 89/389 (22%), Positives = 180/389 (46%), Gaps = 6/389 (1%)
Query: 97 MDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRR 156
+ + +LI+ + K D A+ + K + + + ++ ++ A+ + G + AE + R
Sbjct: 335 VTYSILISGFAKINDSQSADNLFKEAKTKLSSLNGIIYSNIIHAHCQSGNMERAEELVRE 394
Query: 157 MQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKK 216
M+ G Y ++ + + VF L ++ KP + ++ +Y K
Sbjct: 395 MEEDGIDAPIDVYHSMMHGYTIIQNENKCLVVFERL---KECGFKPSIISYGCLLNLYVK 451
Query: 217 AGGYEKARKLFALMAERGVQQSTVTYNSLMS---FETNYKEVSKIYDQMQRAGLQPDVVS 273
G KA + M G++ + TY+ L++ ++ I+++M R+GLQPD
Sbjct: 452 IGKVAKALSISKEMESCGIKHNNKTYSMLINGFIHLHDFANAFAIFEEMLRSGLQPDRAI 511
Query: 274 YALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMR 333
Y LLI A+ K + A+ + E+M ++P+++A+ +++ +A++G + A MR
Sbjct: 512 YNLLIEAFCKMGNMDRAICILEKMQKERMQPSNRAFRPIIEGYAVAGDMKSALDTLDLMR 571
Query: 334 RDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLE 393
R C P + +Y ++ V ++ A ++ G PN TY +++GYA ++
Sbjct: 572 RSGCVPTVMTYNALIHGLVRKHKVQRAVSVLDKMSIAGITPNEHTYTIIMRGYAASGDIG 631
Query: 394 KMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILL 453
K E + K++ +G+K + I+ T++ A K+ SA+ +EM P + NIL+
Sbjct: 632 KAFEYFTKIKESGLKLDVYIYETLLRACCKSGRMQSALAVTREMSFQKIPRNTFIYNILI 691
Query: 454 SLAKTADERNEANELLGNFNHPNNEPGIN 482
+ EA +L+ P I+
Sbjct: 692 DGWARRGDVWEAEDLMKQMKEDGVPPNIH 720
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 70/261 (26%), Positives = 127/261 (48%), Gaps = 4/261 (1%)
Query: 196 EKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLM---SFETNY 252
E+ P KP ++ F +MI Y K G AR F M RG++ + + SL+ + +
Sbjct: 257 ERIP-KPSRREFGLMIVYYAKRGDKHHARATFENMRARGIEPNAFVFTSLVHAYAVARDM 315
Query: 253 KEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNIL 312
+ ++M+ GL+ +V+Y++LI+ + K + A +F+E Y+ +
Sbjct: 316 RGALSCVEEMKSEGLELTIVTYSILISGFAKINDSQSADNLFKEAKTKLSSLNGIIYSNI 375
Query: 313 LDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGF 372
+ A SG +++A + + M D I Y +M+ Y + F RLK+ GF
Sbjct: 376 IHAHCQSGNMERAEELVREMEEDGIDAPIDVYHSMMHGYTIIQNENKCLVVFERLKECGF 435
Query: 373 VPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVV 432
P++I+YG L+ Y K+ + K + I +M GIK N ++ +++ + DF +A
Sbjct: 436 KPSIISYGCLLNLYVKIGKVAKALSISKEMESCGIKHNNKTYSMLINGFIHLHDFANAFA 495
Query: 433 WYKEMESCGFPPDQKAKNILL 453
++EM G PD+ N+L+
Sbjct: 496 IFEEMLRSGLQPDRAIYNLLI 516
Score = 108 bits (271), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 72/266 (27%), Positives = 133/266 (50%), Gaps = 7/266 (2%)
Query: 99 FLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQ 158
F +I Y GD A L M + G P+V+++ AL+ R + + A ++ +M
Sbjct: 547 FRPIIEGYAVAGDMKSALDTLDLMRRSGCVPTVMTYNALIHGLVRKHKVQRAVSVLDKMS 606
Query: 159 SSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAG 218
+G P+ TY II++ + + +A E F + ++S LK D ++ ++ K+G
Sbjct: 607 IAGITPNEHTYTIIMRGYAASGDIGKAFEYFTKI---KESGLKLDVYIYETLLRACCKSG 663
Query: 219 GYEKARKLFALMAERGVQQSTVTYNSLM---SFETNYKEVSKIYDQMQRAGLQPDVVSYA 275
+ A + M+ + + ++T YN L+ + + E + QM+ G+ P++ +Y
Sbjct: 664 RMQSALAVTREMSFQKIPRNTFIYNILIDGWARRGDVWEAEDLMKQMKEDGVPPNIHTYT 723
Query: 276 LLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRD 335
INA KA + A V EEM+D G++P K Y L+ +A + D+A F+ M+
Sbjct: 724 SYINACCKAGDMQRAEKVIEEMVDVGLKPNVKTYTTLIKGWARVSLPDRALKCFEEMKLA 783
Query: 336 RCSPDICSYTTMLSAYVN-ASDMEGA 360
PD SY ++++ ++ A+ MEG+
Sbjct: 784 GLKPDEASYHCLVTSLLSRATVMEGS 809
Score = 78.6 bits (192), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 46/205 (22%), Positives = 98/205 (47%), Gaps = 4/205 (1%)
Query: 251 NYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYN 310
N++ V ++++ + P + L+I Y K + A A FE M G+ P +
Sbjct: 248 NWQAVVSAFERIPK----PSRREFGLMIVYYAKRGDKHHARATFENMRARGIEPNAFVFT 303
Query: 311 ILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQD 370
L+ A+A++ + A + + M+ + I +Y+ ++S + +D + A+ F+ K
Sbjct: 304 SLVHAYAVARDMRGALSCVEEMKSEGLELTIVTYSILISGFAKINDSQSADNLFKEAKTK 363
Query: 371 GFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSA 430
N I Y +I + + N+E+ E+ +M +GI ++ ++M Y ++ +
Sbjct: 364 LSSLNGIIYSNIIHAHCQSGNMERAEELVREMEEDGIDAPIDVYHSMMHGYTIIQNENKC 423
Query: 431 VVWYKEMESCGFPPDQKAKNILLSL 455
+V ++ ++ CGF P + LL+L
Sbjct: 424 LVVFERLKECGFKPSIISYGCLLNL 448
Score = 48.5 bits (114), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 48/94 (51%), Gaps = 1/94 (1%)
Query: 374 PNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVW 433
P+ +G +I YAK + ++ MR GI+PN +FT+++ AY +D A+
Sbjct: 262 PSRREFGLMIVYYAKRGDKHHARATFENMRARGIEPNAFVFTSLVHAYAVARDMRGALSC 321
Query: 434 YKEMESCGFPPDQKAKNILLS-LAKTADERNEAN 466
+EM+S G +IL+S AK D ++ N
Sbjct: 322 VEEMKSEGLELTIVTYSILISGFAKINDSQSADN 355
>gi|224126843|ref|XP_002319940.1| predicted protein [Populus trichocarpa]
gi|222858316|gb|EEE95863.1| predicted protein [Populus trichocarpa]
Length = 555
Score = 163 bits (412), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 118/463 (25%), Positives = 212/463 (45%), Gaps = 25/463 (5%)
Query: 57 PLPKDLVLG----TLVRLKQLKKWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDF 112
PLP + G LVR+K K +S+ +E I + + +LI + +
Sbjct: 87 PLPSIVKFGELFSALVRMKHYKTVVSLSKQMEMAGISH----DVLSLTILINCFCRLCHV 142
Query: 113 NKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQII 172
+ VL + K G P+V++ + L+ + G+ A +F M + G +P+ +Y II
Sbjct: 143 DYGFSVLGKIIKLGLEPNVITFSTLINGFCIEGKIGRAIELFDVMVARGYKPNVHSYSII 202
Query: 173 LKLFVEANKFKEAEEVFMTLLDEEKSP-LKPDQKMFHMMIYMYKKAGGYEKARKLFALMA 231
+K K E + LL+ K +PD +++ ++ K +A +F M
Sbjct: 203 IKGLCRVGKTTEV----IKLLEHMKVVGCEPDVVIYNTIVDRLCKDRLVNEAVHIFCKMK 258
Query: 232 ERGVQQSTVTYNSLMSFETN---YKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREE 288
G+ + VTY SL+ N +KE + ++M+ + PD+V++++LI+ K
Sbjct: 259 GTGILPTVVTYTSLIHGLRNLGRWKEAFGLLNEMKGGNIMPDLVAFSVLIDIMCKEGEVS 318
Query: 289 EALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTML 348
EA + + M + GV P YN L++ + + V +AR VF+ M PD+ S++ ++
Sbjct: 319 EARVILKTMTEMGVEPDVATYNTLMNGYCLRMEVVEARKVFEVMISKGRMPDVFSFSILV 378
Query: 349 SAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIK 408
+ Y A ++ A++ F + G +P+ ++Y TLI G + + E++ M NG
Sbjct: 379 NGYCKAKRIDEAKQLFDEMTHRGLIPDTVSYNTLISGLCQARRPLEAEELFKDMHSNGYP 438
Query: 409 PNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANEL 468
PN ++ ++D K D A+ ++ ME+ G PD NI++ + +A EL
Sbjct: 439 PNLVTYSILLDCLSKQGYLDQAMGLFRAMENSGLKPDLVTYNIMIDGMCKYGKFKDAREL 498
Query: 469 LGNFN----HPNN---EPGINGLSIS--VDEEDDDDDDDEDDD 502
+ PNN P I+G+ +DE E DD
Sbjct: 499 FAELSVKGLQPNNWVCTPTIDGVCKGGLLDEAHKAFRQMEKDD 541
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 98/360 (27%), Positives = 170/360 (47%), Gaps = 8/360 (2%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + ++I + G + K+L M G P VV + +++ + A IF
Sbjct: 195 NVHSYSIIIKGLCRVGKTTEVIKLLEHMKVVGCEPDVVIYNTIVDRLCKDRLVNEAVHIF 254
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSP-LKPDQKMFHMMIYM 213
+M+ +G P+ +TY ++ ++KEA LL+E K + PD F ++I +
Sbjct: 255 CKMKGTGILPTVVTYTSLIHGLRNLGRWKEA----FGLLNEMKGGNIMPDLVAFSVLIDI 310
Query: 214 YKKAGGYEKARKLFALMAERGVQQSTVTYNSLM---SFETNYKEVSKIYDQMQRAGLQPD 270
K G +AR + M E GV+ TYN+LM E K+++ M G PD
Sbjct: 311 MCKEGEVSEARVILKTMTEMGVEPDVATYNTLMNGYCLRMEVVEARKVFEVMISKGRMPD 370
Query: 271 VVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFK 330
V S+++L+N Y KA+R +EA +F+EM G+ P +YN L+ + +A +FK
Sbjct: 371 VFSFSILVNGYCKAKRIDEAKQLFDEMTHRGLIPDTVSYNTLISGLCQARRPLEAEELFK 430
Query: 331 CMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVN 390
M + P++ +Y+ +L ++ A FR ++ G P+++TY +I G K
Sbjct: 431 DMHSNGYPPNLVTYSILLDCLSKQGYLDQAMGLFRAMENSGLKPDLVTYNIMIDGMCKYG 490
Query: 391 NLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKN 450
+ E++ ++ V G++PN + T +D K D A +++ME P Q N
Sbjct: 491 KFKDARELFAELSVKGLQPNNWVCTPTIDGVCKGGLLDEAHKAFRQMEKDDCSPAQGCIN 550
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 51/239 (21%), Positives = 110/239 (46%)
Query: 251 NYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYN 310
N + ++ M P +V + L +A + + + +++ ++M AG+ +
Sbjct: 71 NINDALSAFNHMVNTNPLPSIVKFGELFSALVRMKHYKTVVSLSKQMEMAGISHDVLSLT 130
Query: 311 ILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQD 370
IL++ F VD +V + + P++ +++T+++ + + A + F +
Sbjct: 131 ILINCFCRLCHVDYGFSVLGKIIKLGLEPNVITFSTLINGFCIEGKIGRAIELFDVMVAR 190
Query: 371 GFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSA 430
G+ PNV +Y +IKG +V +++++ + M+V G +P+ I+ TI+D K++ + A
Sbjct: 191 GYKPNVHSYSIIIKGLCRVGKTTEVIKLLEHMKVVGCEPDVVIYNTIVDRLCKDRLVNEA 250
Query: 431 VVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGINGLSISVD 489
V + +M+ G P L+ + EA LL N P + S+ +D
Sbjct: 251 VHIFCKMKGTGILPTVVTYTSLIHGLRNLGRWKEAFGLLNEMKGGNIMPDLVAFSVLID 309
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 37/169 (21%), Positives = 71/169 (42%)
Query: 285 RREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSY 344
R +AL+ F M++ P+ + L A ++ K M S D+ S
Sbjct: 70 RNINDALSAFNHMVNTNPLPSIVKFGELFSALVRMKHYKTVVSLSKQMEMAGISHDVLSL 129
Query: 345 TTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRV 404
T +++ + ++ ++ + G PNVIT+ TLI G+ + + +E++D M
Sbjct: 130 TILINCFCRLCHVDYGFSVLGKIIKLGLEPNVITFSTLINGFCIEGKIGRAIELFDVMVA 189
Query: 405 NGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILL 453
G KPN ++ I+ + + + M+ G PD N ++
Sbjct: 190 RGYKPNVHSYSIIIKGLCRVGKTTEVIKLLEHMKVVGCEPDVVIYNTIV 238
>gi|125602942|gb|EAZ42267.1| hypothetical protein OsJ_26834 [Oryza sativa Japonica Group]
Length = 1088
Score = 163 bits (412), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 98/347 (28%), Positives = 169/347 (48%), Gaps = 6/347 (1%)
Query: 103 ITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGP 162
I A G + A ++ M KG P+V ++TAL+ G K A +F RM G
Sbjct: 497 IIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGV 556
Query: 163 RPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEK 222
P+ +TY ++ + VE + K A F+ L ++ L + ++ MI Y G +K
Sbjct: 557 FPNTVTYNALINILVENRRIKYA---FVVLNLMGRNGLFTNIVTYNEMIKGYCILGDPKK 613
Query: 223 ARKLFALMAERGVQQSTVTYNSLMSF---ETNYKEVSKIYDQMQRAGLQPDVVSYALLIN 279
A + M +RG + VTYN+++ N +I D M+ G +PD SY LI
Sbjct: 614 AMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELIC 673
Query: 280 AYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSP 339
+ K + E A +F EM+D G+ P Y L+D + +D A ++ + M+R C P
Sbjct: 674 GFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRP 733
Query: 340 DICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIY 399
++ +Y ++ ++ GAE+ + + ++G PNV+TY +I G K + +E++
Sbjct: 734 NVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMF 793
Query: 400 DKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQ 446
+KM G PN +++++ A G+ + A + E+E G PD+
Sbjct: 794 NKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDE 840
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 89/382 (23%), Positives = 176/382 (46%), Gaps = 16/382 (4%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + + +I A K G+ AE ++ + + +P ++T+++ + R +A +F
Sbjct: 384 NLLIYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVF 443
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEA-----EEVFMTLLDEEKSPLKPDQKMFHM 209
+M G P+ +TY ++ ++ + EA E + +L + P + M
Sbjct: 444 NQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDM 503
Query: 210 MIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMS---FETNYKEVSKIYDQMQRAG 266
G YE A +LF M +G + + TY +L+S K ++ +M R G
Sbjct: 504 --------GCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDG 555
Query: 267 LQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQAR 326
+ P+ V+Y LIN + RR + A V M G+ YN ++ + I G +A
Sbjct: 556 VFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGLFTNIVTYNEMIKGYCILGDPKKAM 615
Query: 327 TVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGY 386
V M + S ++ +Y T++ Y ++ + A + ++ G P+ +Y LI G+
Sbjct: 616 LVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGF 675
Query: 387 AKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQ 446
K++ +E ++++M +G+ PN+ +T ++D Y K++ D+A + M+ G P+
Sbjct: 676 CKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNV 735
Query: 447 KAKNILLSLAKTADERNEANEL 468
+ N+L+ + + A EL
Sbjct: 736 QTYNVLIHGLTKQNNFSGAEEL 757
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 100/383 (26%), Positives = 177/383 (46%), Gaps = 24/383 (6%)
Query: 94 FNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAI 153
+NEM I Y GD KA V++ M ++G++ ++V++ +++ Y G +A I
Sbjct: 598 YNEM-----IKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRI 652
Query: 154 FRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYM 213
M+ G +P +Y ++ F + +K + A +F ++D+ L P++ + +I
Sbjct: 653 LDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDG---LCPNEVTYTALIDG 709
Query: 214 YKKAGGYEKARKLFALMAERGVQQSTVTYNSL---MSFETNYKEVSKIYDQMQRAGLQPD 270
Y K + A L M G + + TYN L ++ + N+ ++ M G+ P+
Sbjct: 710 YCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPN 769
Query: 271 VVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFK 330
VV+Y +I+ K AL +F +M++ G P Y+ L+ A G V++A +F
Sbjct: 770 VVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFA 829
Query: 331 CMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVN 390
+ R PD +Y M+ AY+ + +E A F R+ + G P + TYG LIKG
Sbjct: 830 ELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKGLKN-- 887
Query: 391 NLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYG-KNKDFDSAVVWYKEMESCGFPPDQKAK 449
E ++ + + PN + +G + D D+ V ++ + +
Sbjct: 888 --EYLLADQRLAALPDVVPNCS--------FGYQTTDQDAVSVMSAKLAELDPGLSVQVQ 937
Query: 450 NILLSLAKTADERNEANELLGNF 472
N L+S TA EANELLG+
Sbjct: 938 NALVSNLSTAGRWFEANELLGSM 960
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 111/471 (23%), Positives = 190/471 (40%), Gaps = 47/471 (9%)
Query: 19 FKDAADEAGKK----NWRRLMNQIEEVGSAVAVL-RSERTRGQPLPKDLVLGTLVRLKQL 73
F D ++G + + L+ + +G AV+ R R + + +L++ V
Sbjct: 337 FLDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLIYNAVINALC 396
Query: 74 KKWNVV-SEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVV 132
K NV +E + +S + + +I + ++ D + A +V + M K+G P+ V
Sbjct: 397 KDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCEPNTV 456
Query: 133 SHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTL 192
+++ L+ GR A + R M G P+A T + + +++A +F
Sbjct: 457 TYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWRLF--- 513
Query: 193 LDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNY 252
+D + +P+ + +I +G + A LF M+ GV +TVTYN+L++
Sbjct: 514 VDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALINILVEN 573
Query: 253 KEVS---KIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAY 309
+ + + + M R GL ++V+Y +I Y ++A+ V ML G Y
Sbjct: 574 RRIKYAFVVLNLMGRNGLFTNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTY 633
Query: 310 NILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQ 369
N ++ + SG A + MR C PD SYT ++ + S ME A F +
Sbjct: 634 NTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVD 693
Query: 370 DGFVPN-----------------------------------VITYGTLIKGYAKVNNLEK 394
DG PN V TY LI G K NN
Sbjct: 694 DGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSG 753
Query: 395 MMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPD 445
E+ M GI PN +T ++D KN A+ + +M G P+
Sbjct: 754 AEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPN 804
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 93/427 (21%), Positives = 174/427 (40%), Gaps = 41/427 (9%)
Query: 100 LMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQS 159
+ LI + + + L +++ G + +++AL+ R G + RM S
Sbjct: 319 IHLIKSCHSKEAMARTMSFLDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLS 378
Query: 160 SGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGG 219
G +P+ L Y ++ + +AE + + + E SP D + MI + +
Sbjct: 379 EGVQPNLLIYNAVINALCKDGNVADAETIMKKVFESEMSP---DTFTYTSMILGHCRKHD 435
Query: 220 YEKARKLFALMAERGVQQSTVTYNSLM-----SFETN----------------------- 251
+ A ++F MA+ G + +TVTY++L+ S N
Sbjct: 436 LDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTG 495
Query: 252 ----------YKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAG 301
Y++ +++ M+ G +P+V +Y LI+ + + A+ +F M G
Sbjct: 496 PIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDG 555
Query: 302 VRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAE 361
V P YN L++ + + A V M R+ +I +Y M+ Y D + A
Sbjct: 556 VFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGLFTNIVTYNEMIKGYCILGDPKKAM 615
Query: 362 KFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAY 421
+ Q G N++TY T+IKGY N + I D MR G KP++ +T ++ +
Sbjct: 616 LVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGF 675
Query: 422 GKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGI 481
K +SA + EM G P++ L+ ++ + A LL + P +
Sbjct: 676 CKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNV 735
Query: 482 NGLSISV 488
++ +
Sbjct: 736 QTYNVLI 742
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 92/376 (24%), Positives = 152/376 (40%), Gaps = 41/376 (10%)
Query: 74 KKWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVS 133
+K + + +LE ++ +S N + +LI KQ +F+ AE++ M ++G P+VV+
Sbjct: 714 EKLDTATSLLEHMK-RSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVT 772
Query: 134 HTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLL 193
+TA+++ + G A +F +M G P+ LTY +++ + K +EAE +F L
Sbjct: 773 YTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAEL- 831
Query: 194 DEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYK 253
E+ L PD+ + MI Y +G E A M + G Q + TY L+ N
Sbjct: 832 --ERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKGLKNEY 889
Query: 254 EVSKIYDQMQRAGLQPDVVSYA--------------------------------LLINAY 281
++ QR PDVV L++
Sbjct: 890 LLAD-----QRLAALPDVVPNCSFGYQTTDQDAVSVMSAKLAELDPGLSVQVQNALVSNL 944
Query: 282 GKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDI 341
A R EA + M+ G+ P +AYN LL + VD A VFK M C +
Sbjct: 945 STAGRWFEANELLGSMISQGLCPDQEAYNSLLCSLLRVRNVDLAMGVFKHMSTQGCEVHL 1004
Query: 342 CSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDK 401
Y ++ A + A F + + P+ + LI G + + ME
Sbjct: 1005 NGYKELICALCQLHRRKEARITFENMLMRTWNPDDVVQAVLIDGLLRDGYKDLCMEFLHI 1064
Query: 402 MRVNGIKPNQTIFTTI 417
M P+ I+T +
Sbjct: 1065 METRRYMPSFHIYTIL 1080
>gi|125592120|gb|EAZ32470.1| hypothetical protein OsJ_16686 [Oryza sativa Japonica Group]
Length = 879
Score = 163 bits (412), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 101/395 (25%), Positives = 187/395 (47%), Gaps = 43/395 (10%)
Query: 98 DFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRM 157
+F ++I Y K+GD + A M +G P+ T+L+ AY + A + M
Sbjct: 244 EFGLMIVYYAKRGDKHHARATFENMRARGIEPNAFVFTSLVHAYAVARDMRGALSCVEEM 303
Query: 158 QSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKP-DQKMFHMMIYMYKK 216
+S G + +TY I++ F + N + A+ +F E K+ L + ++ +I+ + +
Sbjct: 304 KSEGLELTIVTYSILISGFAKINDSQSADNLF----KEAKTKLSSLNGIIYSNIIHAHCQ 359
Query: 217 AGGYEKARKLFALMAERGVQQSTVTYNSLMSFET---NYKEVSKIYDQMQRAGLQPDVVS 273
+G E+A +L M E G+ Y+S+M T N + ++++++ G +P ++S
Sbjct: 360 SGNMERAEELVREMEEDGIDAPIDVYHSMMHGYTIIQNENKCLVVFERLKECGFKPSIIS 419
Query: 274 YALLINAYGKARREEEAL-----------------------------------AVFEEML 298
Y L+N Y K + +AL A+FEEML
Sbjct: 420 YGCLLNLYVKIGKVAKALSISKEMESCGIKHNNKTYSMLINGFIHLHDFANAFAIFEEML 479
Query: 299 DAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDME 358
+G++P YN+L++AF G +D+A + + M+++R P ++ ++ Y A DM+
Sbjct: 480 RSGLQPDRAIYNLLIEAFCKMGNMDRAICILEKMQKERMQPSNRAFRPIIEGYAVAGDMK 539
Query: 359 GAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIM 418
A +++ G VP V+TY LI G + + +++ + + DKM + GI PN+ +T IM
Sbjct: 540 SALDTLDLMRRSGCVPTVMTYNALIHGLVRKHKVQRAVSVLDKMSIAGITPNEHTYTIIM 599
Query: 419 DAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILL 453
Y + D A ++ +++ G D LL
Sbjct: 600 RGYAASGDIGKAFEYFTKIKESGLKLDVYIYETLL 634
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 88/380 (23%), Positives = 181/380 (47%), Gaps = 41/380 (10%)
Query: 113 NKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQII 172
NK V + + G+ PS++S+ L+ Y + G+ A +I + M+S G + + TY ++
Sbjct: 399 NKCLVVFERLKECGFKPSIISYGCLLNLYVKIGKVAKALSISKEMESCGIKHNNKTYSML 458
Query: 173 LKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAE 232
+ F+ + F A +F +L +S L+PD+ +++++I + K G ++A + M +
Sbjct: 459 INGFIHLHDFANAFAIFEEML---RSGLQPDRAIYNLLIEAFCKMGNMDRAICILEKMQK 515
Query: 233 RGVQQSTVTYNSLM---SFETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEE 289
+Q S + ++ + + K D M+R+G P V++Y LI+ + + +
Sbjct: 516 ERMQPSNRAFRPIIEGYAVAGDMKSALDTLDLMRRSGCVPTVMTYNALIHGLVRKHKVQR 575
Query: 290 ALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLS 349
A++V ++M AG+ P Y I++ +A SG + +A F ++ D+ Y T+L
Sbjct: 576 AVSVLDKMSIAGITPNEHTYTIIMRGYAASGDIGKAFEYFTKIKESGLKLDVYIYETLLR 635
Query: 350 AYVNASDMEGA-----------------------------------EKFFRRLKQDGFVP 374
A + M+ A E +++K+DG P
Sbjct: 636 ACCKSGRMQSALAVTREMSFQKIPRNTFIYNILIDGWARRGDVWEAEDLMKQMKEDGVPP 695
Query: 375 NVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWY 434
N+ TY + I K ++++ ++ ++M G+KPN +TT++ + + D A+ +
Sbjct: 696 NIHTYTSYINACCKAGDMQRAEKVIEEMVDVGLKPNVKTYTTLIKGWARVSLPDRALKCF 755
Query: 435 KEMESCGFPPDQKAKNILLS 454
+EM+ G PD+ + + L++
Sbjct: 756 EEMKLAGLKPDEASYHCLVT 775
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 97/361 (26%), Positives = 179/361 (49%), Gaps = 10/361 (2%)
Query: 63 VLGTLVRLKQLKKWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFM 122
+L V++ ++ K +S+ +E I+ N + MLI + DF A + M
Sbjct: 423 LLNLYVKIGKVAKALSISKEMESCGIKH----NNKTYSMLINGFIHLHDFANAFAIFEEM 478
Query: 123 NKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKF 182
+ G P + L+EA+ + G A I +MQ +PS ++ I++ + A
Sbjct: 479 LRSGLQPDRAIYNLLIEAFCKMGNMDRAICILEKMQKERMQPSNRAFRPIIEGYAVAGDM 538
Query: 183 KEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTY 242
K A + TL +S P ++ +I+ + ++A + M+ G+ + TY
Sbjct: 539 KSALD---TLDLMRRSGCVPTVMTYNALIHGLVRKHKVQRAVSVLDKMSIAGITPNEHTY 595
Query: 243 NSLMSFETNYKEVSKIYD---QMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLD 299
+M ++ K ++ +++ +GL+ DV Y L+ A K+ R + ALAV EM
Sbjct: 596 TIIMRGYAASGDIGKAFEYFTKIKESGLKLDVYIYETLLRACCKSGRMQSALAVTREMSF 655
Query: 300 AGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEG 359
+ YNIL+D +A G V +A + K M+ D P+I +YT+ ++A A DM+
Sbjct: 656 QKIPRNTFIYNILIDGWARRGDVWEAEDLMKQMKEDGVPPNIHTYTSYINACCKAGDMQR 715
Query: 360 AEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMD 419
AEK + G PNV TY TLIKG+A+V+ ++ ++ +++M++ G+KP++ + ++
Sbjct: 716 AEKVIEEMVDVGLKPNVKTYTTLIKGWARVSLPDRALKCFEEMKLAGLKPDEASYHCLVT 775
Query: 420 A 420
+
Sbjct: 776 S 776
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 89/389 (22%), Positives = 180/389 (46%), Gaps = 6/389 (1%)
Query: 97 MDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRR 156
+ + +LI+ + K D A+ + K + + + ++ ++ A+ + G + AE + R
Sbjct: 313 VTYSILISGFAKINDSQSADNLFKEAKTKLSSLNGIIYSNIIHAHCQSGNMERAEELVRE 372
Query: 157 MQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKK 216
M+ G Y ++ + + VF L ++ KP + ++ +Y K
Sbjct: 373 MEEDGIDAPIDVYHSMMHGYTIIQNENKCLVVFERL---KECGFKPSIISYGCLLNLYVK 429
Query: 217 AGGYEKARKLFALMAERGVQQSTVTYNSLMS---FETNYKEVSKIYDQMQRAGLQPDVVS 273
G KA + M G++ + TY+ L++ ++ I+++M R+GLQPD
Sbjct: 430 IGKVAKALSISKEMESCGIKHNNKTYSMLINGFIHLHDFANAFAIFEEMLRSGLQPDRAI 489
Query: 274 YALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMR 333
Y LLI A+ K + A+ + E+M ++P+++A+ +++ +A++G + A MR
Sbjct: 490 YNLLIEAFCKMGNMDRAICILEKMQKERMQPSNRAFRPIIEGYAVAGDMKSALDTLDLMR 549
Query: 334 RDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLE 393
R C P + +Y ++ V ++ A ++ G PN TY +++GYA ++
Sbjct: 550 RSGCVPTVMTYNALIHGLVRKHKVQRAVSVLDKMSIAGITPNEHTYTIIMRGYAASGDIG 609
Query: 394 KMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILL 453
K E + K++ +G+K + I+ T++ A K+ SA+ +EM P + NIL+
Sbjct: 610 KAFEYFTKIKESGLKLDVYIYETLLRACCKSGRMQSALAVTREMSFQKIPRNTFIYNILI 669
Query: 454 SLAKTADERNEANELLGNFNHPNNEPGIN 482
+ EA +L+ P I+
Sbjct: 670 DGWARRGDVWEAEDLMKQMKEDGVPPNIH 698
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 70/261 (26%), Positives = 127/261 (48%), Gaps = 4/261 (1%)
Query: 196 EKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLM---SFETNY 252
E+ P KP ++ F +MI Y K G AR F M RG++ + + SL+ + +
Sbjct: 235 ERIP-KPSRREFGLMIVYYAKRGDKHHARATFENMRARGIEPNAFVFTSLVHAYAVARDM 293
Query: 253 KEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNIL 312
+ ++M+ GL+ +V+Y++LI+ + K + A +F+E Y+ +
Sbjct: 294 RGALSCVEEMKSEGLELTIVTYSILISGFAKINDSQSADNLFKEAKTKLSSLNGIIYSNI 353
Query: 313 LDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGF 372
+ A SG +++A + + M D I Y +M+ Y + F RLK+ GF
Sbjct: 354 IHAHCQSGNMERAEELVREMEEDGIDAPIDVYHSMMHGYTIIQNENKCLVVFERLKECGF 413
Query: 373 VPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVV 432
P++I+YG L+ Y K+ + K + I +M GIK N ++ +++ + DF +A
Sbjct: 414 KPSIISYGCLLNLYVKIGKVAKALSISKEMESCGIKHNNKTYSMLINGFIHLHDFANAFA 473
Query: 433 WYKEMESCGFPPDQKAKNILL 453
++EM G PD+ N+L+
Sbjct: 474 IFEEMLRSGLQPDRAIYNLLI 494
Score = 108 bits (270), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 72/266 (27%), Positives = 133/266 (50%), Gaps = 7/266 (2%)
Query: 99 FLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQ 158
F +I Y GD A L M + G P+V+++ AL+ R + + A ++ +M
Sbjct: 525 FRPIIEGYAVAGDMKSALDTLDLMRRSGCVPTVMTYNALIHGLVRKHKVQRAVSVLDKMS 584
Query: 159 SSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAG 218
+G P+ TY II++ + + +A E F + ++S LK D ++ ++ K+G
Sbjct: 585 IAGITPNEHTYTIIMRGYAASGDIGKAFEYFTKI---KESGLKLDVYIYETLLRACCKSG 641
Query: 219 GYEKARKLFALMAERGVQQSTVTYNSLM---SFETNYKEVSKIYDQMQRAGLQPDVVSYA 275
+ A + M+ + + ++T YN L+ + + E + QM+ G+ P++ +Y
Sbjct: 642 RMQSALAVTREMSFQKIPRNTFIYNILIDGWARRGDVWEAEDLMKQMKEDGVPPNIHTYT 701
Query: 276 LLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRD 335
INA KA + A V EEM+D G++P K Y L+ +A + D+A F+ M+
Sbjct: 702 SYINACCKAGDMQRAEKVIEEMVDVGLKPNVKTYTTLIKGWARVSLPDRALKCFEEMKLA 761
Query: 336 RCSPDICSYTTMLSAYVN-ASDMEGA 360
PD SY ++++ ++ A+ MEG+
Sbjct: 762 GLKPDEASYHCLVTSLLSRATVMEGS 787
Score = 78.6 bits (192), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 46/205 (22%), Positives = 98/205 (47%), Gaps = 4/205 (1%)
Query: 251 NYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYN 310
N++ V ++++ + P + L+I Y K + A A FE M G+ P +
Sbjct: 226 NWQAVVSAFERIPK----PSRREFGLMIVYYAKRGDKHHARATFENMRARGIEPNAFVFT 281
Query: 311 ILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQD 370
L+ A+A++ + A + + M+ + I +Y+ ++S + +D + A+ F+ K
Sbjct: 282 SLVHAYAVARDMRGALSCVEEMKSEGLELTIVTYSILISGFAKINDSQSADNLFKEAKTK 341
Query: 371 GFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSA 430
N I Y +I + + N+E+ E+ +M +GI ++ ++M Y ++ +
Sbjct: 342 LSSLNGIIYSNIIHAHCQSGNMERAEELVREMEEDGIDAPIDVYHSMMHGYTIIQNENKC 401
Query: 431 VVWYKEMESCGFPPDQKAKNILLSL 455
+V ++ ++ CGF P + LL+L
Sbjct: 402 LVVFERLKECGFKPSIISYGCLLNL 426
Score = 48.1 bits (113), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 48/94 (51%), Gaps = 1/94 (1%)
Query: 374 PNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVW 433
P+ +G +I YAK + ++ MR GI+PN +FT+++ AY +D A+
Sbjct: 240 PSRREFGLMIVYYAKRGDKHHARATFENMRARGIEPNAFVFTSLVHAYAVARDMRGALSC 299
Query: 434 YKEMESCGFPPDQKAKNILLS-LAKTADERNEAN 466
+EM+S G +IL+S AK D ++ N
Sbjct: 300 VEEMKSEGLELTIVTYSILISGFAKINDSQSADN 333
>gi|302769103|ref|XP_002967971.1| hypothetical protein SELMODRAFT_145138 [Selaginella moellendorffii]
gi|300164709|gb|EFJ31318.1| hypothetical protein SELMODRAFT_145138 [Selaginella moellendorffii]
Length = 1354
Score = 163 bits (412), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 93/378 (24%), Positives = 177/378 (46%), Gaps = 6/378 (1%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + L++AY + G+F +A + L M G P+ ++EA+GR G+ K +
Sbjct: 669 NTSAYSALLSAYAETGNFERATRALDNMVAAGLQPNAACANYVLEAFGRAGKAKELSEFY 728
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
+R+ G P++ T+ +I F +EA ++ + ++ P ++F ++ +Y
Sbjct: 729 QRLPEMGITPNSRTFVVIFHAFSRNGNLEEARSMYRQM---REAGFSPSIQVFKALLALY 785
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFET---NYKEVSKIYDQMQRAGLQPDV 271
+ A +L + + G++ YN ++S + +Y++ + ++ MQ G PD
Sbjct: 786 SRETVEIDAEELVKDIKKAGLELDMDIYNHMISLYSKLGSYRKAALVFKGMQEIGCSPDA 845
Query: 272 VSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKC 331
++ LI Y + + +EA A+ EM+ G P Y L+ A+ + A VFK
Sbjct: 846 TTFNTLIMLYSRNQMVQEAQALLREMIKTGNAPNISTYTTLISAYGRLQAYEDAELVFKS 905
Query: 332 MRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNN 391
+ C PD +Y M++ Y A + E+ ++K DGF P++ T L+ Y K
Sbjct: 906 IAETGCKPDATAYNVMINVYRKAGEHRKIEEVIEQMKADGFEPSLTTIHMLMDSYGKGGA 965
Query: 392 LEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNI 451
K E+ + + G+ P+ +T+I++++ NKD+ SAV+W ++M P
Sbjct: 966 TGKAEEVLETLPEIGMSPDAIHYTSIINSHLNNKDYLSAVIWLRKMTDACVRPTHVTITC 1025
Query: 452 LLSLAKTADERNEANELL 469
+ A + + A LL
Sbjct: 1026 FVGAASVCERSSHALMLL 1043
Score = 146 bits (369), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 82/324 (25%), Positives = 168/324 (51%), Gaps = 7/324 (2%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKN-AEAIFRRMQSS 160
L++ Y + GD+N +++L M +G P +V+ +++A RGG + A ++ + + ++
Sbjct: 120 LMSVYARHGDWNSVQQLLCRMQDRGCRPDLVTFNIVIKARTRGGMQEGLASSLLQDVYAA 179
Query: 161 GPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGY 220
G RP +TY ++ N+ +A +F + ++ PD ++ MI +Y +AG
Sbjct: 180 GLRPDTITYNTLISACSLNNRLSDAILIFEEM---QRQGCDPDIWTYNAMISVYGRAGRV 236
Query: 221 EKARKLFALMAERGVQQSTVTYNSLM---SFETNYKEVSKIYDQMQRAGLQPDVVSYALL 277
E A +F +M E+G VTYNS++ + + +EV +I M+ A D ++Y +
Sbjct: 237 EAASSIFRIMQEQGFTPDAVTYNSVLHAFARDGRIEEVERIRGMMRDARCSSDEITYNTM 296
Query: 278 INAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRC 337
I+ YGKA +A ++ +M + G P + +L+D +G V++A +F+ M + +
Sbjct: 297 IHMYGKAGMHRKAEELYVQMKEEGRCPDSVTFTVLIDTLGKAGFVNEAAAMFEDMLKSQV 356
Query: 338 SPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMME 397
P + +++ M+ AY A AE + + + G P+++ Y ++ + K EK +
Sbjct: 357 RPTLQAFSAMICAYAKADMFSDAEHTYSCMLRAGVRPDLLAYSVMLDVFFKAEMPEKCII 416
Query: 398 IYDKMRVNGIKPNQTIFTTIMDAY 421
+Y M +G+KP +++ ++ +
Sbjct: 417 LYKAMVGSGLKPELSVYAIMVRVF 440
Score = 139 bits (349), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 100/402 (24%), Positives = 173/402 (43%), Gaps = 45/402 (11%)
Query: 56 QPLPKDLVLGTLVRLKQLKKWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKA 115
Q P DL +V+ W E+ E L + W+ N ++++ G+ A
Sbjct: 42 QLAPTDLCY--VVKRVANTSWQRALELYECLNVARWYAPNPRMLAVMLSVLGRANQPGLA 99
Query: 116 EKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKL 175
+++ + V + +LM Y R G + + + + RMQ G RP +T
Sbjct: 100 QELFD-RAESSIGNCVQVYNSLMSVYARHGDWNSVQQLLCRMQDRGCRPDLVT------- 151
Query: 176 FVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEK-ARKLFALMAERG 234
F+++I + G E A L + G
Sbjct: 152 -------------------------------FNIVIKARTRGGMQEGLASSLLQDVYAAG 180
Query: 235 VQQSTVTYNSLMS---FETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEAL 291
++ T+TYN+L+S + I+++MQR G PD+ +Y +I+ YG+A R E A
Sbjct: 181 LRPDTITYNTLISACSLNNRLSDAILIFEEMQRQGCDPDIWTYNAMISVYGRAGRVEAAS 240
Query: 292 AVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAY 351
++F M + G P YN +L AFA G +++ + MR RCS D +Y TM+ Y
Sbjct: 241 SIFRIMQEQGFTPDAVTYNSVLHAFARDGRIEEVERIRGMMRDARCSSDEITYNTMIHMY 300
Query: 352 VNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQ 411
A AE+ + ++K++G P+ +T+ LI K + + +++ M + ++P
Sbjct: 301 GKAGMHRKAEELYVQMKEEGRCPDSVTFTVLIDTLGKAGFVNEAAAMFEDMLKSQVRPTL 360
Query: 412 TIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILL 453
F+ ++ AY K F A Y M G PD A +++L
Sbjct: 361 QAFSAMICAYAKADMFSDAEHTYSCMLRAGVRPDLLAYSVML 402
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 77/271 (28%), Positives = 135/271 (49%), Gaps = 6/271 (2%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
LI+A + A + M ++G P + ++ A++ YGR GR + A +IFR MQ G
Sbjct: 191 LISACSLNNRLSDAILIFEEMQRQGCDPDIWTYNAMISVYGRAGRVEAASSIFRIMQEQG 250
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
P A+TY +L F + +E E + + D S D+ ++ MI+MY KAG +
Sbjct: 251 FTPDAVTYNSVLHAFARDGRIEEVERIRGMMRDARCSS---DEITYNTMIHMYGKAGMHR 307
Query: 222 KARKLFALMAERGVQQSTVTYNSLMSFETN---YKEVSKIYDQMQRAGLQPDVVSYALLI 278
KA +L+ M E G +VT+ L+ E + +++ M ++ ++P + +++ +I
Sbjct: 308 KAEELYVQMKEEGRCPDSVTFTVLIDTLGKAGFVNEAAAMFEDMLKSQVRPTLQAFSAMI 367
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCS 338
AY KA +A + ML AGVRP AY+++LD F + M ++ ++K M
Sbjct: 368 CAYAKADMFSDAEHTYSCMLRAGVRPDLLAYSVMLDVFFKAEMPEKCIILYKAMVGSGLK 427
Query: 339 PDICSYTTMLSAYVNASDMEGAEKFFRRLKQ 369
P++ Y M+ + S + E + + Q
Sbjct: 428 PELSVYAIMVRVFYQKSSLAEIENLSKEMVQ 458
Score = 122 bits (305), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 82/333 (24%), Positives = 155/333 (46%), Gaps = 10/333 (3%)
Query: 161 GPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGY 220
P P L ++L + AN+ A+E+F D +S + ++++ ++ +Y + G +
Sbjct: 77 APNPRMLA--VMLSVLGRANQPGLAQELF----DRAESSIGNCVQVYNSLMSVYARHGDW 130
Query: 221 EKARKLFALMAERGVQQSTVTYNSLMSFET--NYKE--VSKIYDQMQRAGLQPDVVSYAL 276
++L M +RG + VT+N ++ T +E S + + AGL+PD ++Y
Sbjct: 131 NSVQQLLCRMQDRGCRPDLVTFNIVIKARTRGGMQEGLASSLLQDVYAAGLRPDTITYNT 190
Query: 277 LINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDR 336
LI+A R +A+ +FEEM G P YN ++ + +G V+ A ++F+ M+
Sbjct: 191 LISACSLNNRLSDAILIFEEMQRQGCDPDIWTYNAMISVYGRAGRVEAASSIFRIMQEQG 250
Query: 337 CSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMM 396
+PD +Y ++L A+ +E E+ ++ + ITY T+I Y K K
Sbjct: 251 FTPDAVTYNSVLHAFARDGRIEEVERIRGMMRDARCSSDEITYNTMIHMYGKAGMHRKAE 310
Query: 397 EIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLA 456
E+Y +M+ G P+ FT ++D GK + A +++M P +A + ++
Sbjct: 311 ELYVQMKEEGRCPDSVTFTVLIDTLGKAGFVNEAAAMFEDMLKSQVRPTLQAFSAMICAY 370
Query: 457 KTADERNEANELLGNFNHPNNEPGINGLSISVD 489
AD ++A P + S+ +D
Sbjct: 371 AKADMFSDAEHTYSCMLRAGVRPDLLAYSVMLD 403
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 94/421 (22%), Positives = 183/421 (43%), Gaps = 41/421 (9%)
Query: 107 GKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSA 166
K G F++AE+ + G A L+ +Y R G A A F M + G A
Sbjct: 541 AKAGRFSEAEEEMRTSQTYGQAQVSDFLKVLVASYDRAGMQDEALARFLDMTTEGLEMDA 600
Query: 167 LTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKL 226
Q + + A E+ + L + D M +I Y K ++ A +
Sbjct: 601 EVLQTAVMCYCRKGFAFVAHELLIDCLHAFEVK---DSAMHVAIIASYGKLKLWQNAEIV 657
Query: 227 FALMAERGVQQSTVTYNSLMSF--ET-NYKEVSKIYDQMQRAGLQPDVVSYALLINAYGK 283
F + G +T Y++L+S ET N++ ++ D M AGLQP+ ++ A+G+
Sbjct: 658 FRDLQRHGFAGNTSAYSALLSAYAETGNFERATRALDNMVAAGLQPNAACANYVLEAFGR 717
Query: 284 ARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSP---- 339
A + +E ++ + + G+ P + + ++ AF+ +G +++AR++++ MR SP
Sbjct: 718 AGKAKELSEFYQRLPEMGITPNSRTFVVIFHAFSRNGNLEEARSMYRQMREAGFSPSIQV 777
Query: 340 -------------------------------DICSYTTMLSAYVNASDMEGAEKFFRRLK 368
D+ Y M+S Y A F+ ++
Sbjct: 778 FKALLALYSRETVEIDAEELVKDIKKAGLELDMDIYNHMISLYSKLGSYRKAALVFKGMQ 837
Query: 369 QDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFD 428
+ G P+ T+ TLI Y++ +++ + +M G PN + +TT++ AYG+ + ++
Sbjct: 838 EIGCSPDATTFNTLIMLYSRNQMVQEAQALLREMIKTGNAPNISTYTTLISAYGRLQAYE 897
Query: 429 SAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGINGLSISV 488
A + +K + G PD A N+++++ + A E + E++ EP + + + +
Sbjct: 898 DAELVFKSIAETGCKPDATAYNVMINVYRKAGEHRKIEEVIEQMKADGFEPSLTTIHMLM 957
Query: 489 D 489
D
Sbjct: 958 D 958
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/234 (25%), Positives = 108/234 (46%), Gaps = 6/234 (2%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
+I+ Y K G + KA V M + G +P + L+ Y R + A+A+ R M +G
Sbjct: 816 MISLYSKLGSYRKAALVFKGMQEIGCSPDATTFNTLIMLYSRNQMVQEAQALLREMIKTG 875
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
P+ TY ++ + +++AE VF ++ + + KPD +++MI +Y+KAG +
Sbjct: 876 NAPNISTYTTLISAYGRLQAYEDAELVFKSIAE---TGCKPDATAYNVMINVYRKAGEHR 932
Query: 222 KARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSK---IYDQMQRAGLQPDVVSYALLI 278
K ++ M G + S T + LM K + + + G+ PD + Y +I
Sbjct: 933 KIEEVIEQMKADGFEPSLTTIHMLMDSYGKGGATGKAEEVLETLPEIGMSPDAIHYTSII 992
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCM 332
N++ + A+ +M DA VRPTH + A ++ A + K +
Sbjct: 993 NSHLNNKDYLSAVIWLRKMTDACVRPTHVTITCFVGAASVCERSSHALMLLKAL 1046
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 83/413 (20%), Positives = 170/413 (41%), Gaps = 41/413 (9%)
Query: 108 KQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSAL 167
K G + +A VL +G A V + ++ A+ G+ +A + + S P +A
Sbjct: 472 KGGFYAEAAVVLKISFAQGVAVKVETLNDVLGAFEASGKLSDARDLVHAVSSIEPSVAAH 531
Query: 168 TYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLF 227
Y+ + + +A +F EAEE T ++ + +++ Y +AG ++A F
Sbjct: 532 LYKRLALMLAKAGRFSEAEEEMRTSQTYGQAQVS---DFLKVLVASYDRAGMQDEALARF 588
Query: 228 ALMAERG-------VQQSTVTY--------------NSLMSFETN--------------- 251
M G +Q + + Y + L +FE
Sbjct: 589 LDMTTEGLEMDAEVLQTAVMCYCRKGFAFVAHELLIDCLHAFEVKDSAMHVAIIASYGKL 648
Query: 252 --YKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAY 309
++ ++ +QR G + +Y+ L++AY + E A + M+ AG++P
Sbjct: 649 KLWQNAEIVFRDLQRHGFAGNTSAYSALLSAYAETGNFERATRALDNMVAAGLQPNAACA 708
Query: 310 NILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQ 369
N +L+AF +G + ++ + +P+ ++ + A+ ++E A +R++++
Sbjct: 709 NYVLEAFGRAGKAKELSEFYQRLPEMGITPNSRTFVVIFHAFSRNGNLEEARSMYRQMRE 768
Query: 370 DGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDS 429
GF P++ + L+ Y++ E+ ++ G++ + I+ ++ Y K +
Sbjct: 769 AGFSPSIQVFKALLALYSRETVEIDAEELVKDIKKAGLELDMDIYNHMISLYSKLGSYRK 828
Query: 430 AVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGIN 482
A + +K M+ G PD N L+ L EA LL N P I+
Sbjct: 829 AALVFKGMQEIGCSPDATTFNTLIMLYSRNQMVQEAQALLREMIKTGNAPNIS 881
>gi|115482712|ref|NP_001064949.1| Os10g0495200 [Oryza sativa Japonica Group]
gi|78708847|gb|ABB47822.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
sativa Japonica Group]
gi|113639558|dbj|BAF26863.1| Os10g0495200 [Oryza sativa Japonica Group]
Length = 782
Score = 163 bits (412), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 103/380 (27%), Positives = 182/380 (47%), Gaps = 12/380 (3%)
Query: 111 DFNKAEKVLSFMNKK------GYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRP 164
D N++++ L ++ G P VVS+ ++ + + G A + + M G P
Sbjct: 175 DENRSQEALELLHMMADDRGGGSPPDVVSYNTVLNGFFKEGDSDKAYSTYHEMLDRGILP 234
Query: 165 SALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKAR 224
+TY I+ +A +A EV T++ K+ + PD ++ +++ Y +G ++A
Sbjct: 235 DVVTYSSIIAALCKAQAMDKAMEVLNTMV---KNGVMPDCMTYNSILHGYCSSGQPKEAI 291
Query: 225 KLFALMAERGVQQSTVTYNSLMSFETN---YKEVSKIYDQMQRAGLQPDVVSYALLINAY 281
M GV+ + VTY+SLM++ E KI+D M + GL+PD+ +Y L+ Y
Sbjct: 292 GTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGY 351
Query: 282 GKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDI 341
E A+ + M+ G++P H +NIL+ A+A VDQA VF MR+ +P++
Sbjct: 352 ATKGALVEMHALLDLMVRNGIQPDHHVFNILICAYAKQEKVDQAMLVFSKMRQHGLNPNV 411
Query: 342 CSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDK 401
Y T++ + ++ A +F ++ +G PN+I Y +LI G + +K E+ +
Sbjct: 412 VCYGTVIDVLCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHGLCTCDKWDKAEELILE 471
Query: 402 MRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADE 461
M GI N F +I+D++ K + + M G PD N L+ A +
Sbjct: 472 MLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGK 531
Query: 462 RNEANELLGNFNHPNNEPGI 481
+EA +LL + +P I
Sbjct: 532 MDEATKLLASMVSVGVKPDI 551
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 92/375 (24%), Positives = 181/375 (48%), Gaps = 4/375 (1%)
Query: 99 FLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNA-EAIFRRM 157
+ +LI + G + L + KKG+ ++ T L++ R +A + + RRM
Sbjct: 95 YAILIGCCCRAGRLDLGFAALGNVVKKGFRVDAITFTPLLKGLCADKRTSDAMDIVLRRM 154
Query: 158 QSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKA 217
G P +Y +LK + N+ +EA E+ + D+ PD ++ ++ + K
Sbjct: 155 TELGCIPDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNTVLNGFFKE 214
Query: 218 GGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSK---IYDQMQRAGLQPDVVSY 274
G +KA + M +RG+ VTY+S+++ + + K + + M + G+ PD ++Y
Sbjct: 215 GDSDKAYSTYHEMLDRGILPDVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTY 274
Query: 275 ALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRR 334
+++ Y + + +EA+ ++M GV P Y+ L++ +G +AR +F M +
Sbjct: 275 NSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTK 334
Query: 335 DRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEK 394
PDI +Y T+L Y + + ++G P+ + LI YAK +++
Sbjct: 335 RGLEPDIATYRTLLQGYATKGALVEMHALLDLMVRNGIQPDHHVFNILICAYAKQEKVDQ 394
Query: 395 MMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLS 454
M ++ KMR +G+ PN + T++D K+ D A++++++M G P+ L+
Sbjct: 395 AMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIH 454
Query: 455 LAKTADERNEANELL 469
T D+ ++A EL+
Sbjct: 455 GLCTCDKWDKAEELI 469
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 93/390 (23%), Positives = 174/390 (44%), Gaps = 41/390 (10%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
+I A K +KA +VL+ M K G P +++ +++ Y G+ K A ++M+S G
Sbjct: 242 IIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDG 301
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
P+ +TY ++ + + EA ++F ++ K L+PD + ++ Y G
Sbjct: 302 VEPNVVTYSSLMNYLCKNGRSTEARKIFDSM---TKRGLEPDIATYRTLLQGYATKGALV 358
Query: 222 KARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSK---IYDQMQRAGLQPDVVSYALLI 278
+ L LM G+Q +N L+ ++V + ++ +M++ GL P+VV Y +I
Sbjct: 359 EMHALLDLMVRNGIQPDHHVFNILICAYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGTVI 418
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAY----------------------------- 309
+ K+ ++A+ FE+M+D G+ P Y
Sbjct: 419 DVLCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHGLCTCDKWDKAEELILEMLDRGIC 478
Query: 310 ------NILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKF 363
N ++D+ G V ++ +F M R PDI +Y T++ A M+ A K
Sbjct: 479 LNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKL 538
Query: 364 FRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGK 423
+ G P+++TYGTLI GY +V+ ++ + ++ +M +G+ PN + I+
Sbjct: 539 LASMVSVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFH 598
Query: 424 NKDFDSAVVWYKEMESCGFPPDQKAKNILL 453
+ +A Y + G + NI+L
Sbjct: 599 TRRTAAAKELYVSITKSGTQLELSTYNIIL 628
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 95/393 (24%), Positives = 176/393 (44%), Gaps = 41/393 (10%)
Query: 99 FLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQ 158
F +LI AY KQ ++A V S M + G P+VV + +++ + G +A F +M
Sbjct: 379 FNILICAYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQMI 438
Query: 159 SSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAG 218
G P+ + Y ++ +K+ +AEE+ + +LD + + F+ +I + K G
Sbjct: 439 DEGLTPNIIVYTSLIHGLCTCDKWDKAEELILEMLDR---GICLNTIFFNSIIDSHCKEG 495
Query: 219 GYEKARKLFALMAERGVQQSTVTYNSLM---SFETNYKEVSKIYDQMQRAGLQPDVVSYA 275
++ KLF LM GV+ +TYN+L+ E +K+ M G++PD+V+Y
Sbjct: 496 RVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYG 555
Query: 276 LLINAYGKARREEEALAVFEEMLDAGVRPT------------H----------------- 306
LIN Y + R ++ALA+F+EM+ +GV P H
Sbjct: 556 TLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVSITKS 615
Query: 307 ------KAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGA 360
YNI+L + + D+A +F+ + + ++ M+ A + M+ A
Sbjct: 616 GTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKCGRMDEA 675
Query: 361 EKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDA 420
+ F +G VP+V TY + + + +LE++ +++ M NG + + +I+
Sbjct: 676 KDLFAAHSANGLVPDVRTYSLMAENLIEQGSLEELDDLFLSMEENGCSADSRMLNSIVRK 735
Query: 421 YGKNKDFDSAVVWYKEMESCGFPPDQKAKNILL 453
+ D A + ++ F + + LL
Sbjct: 736 LLQRGDITRAGTYLFMIDEKHFSLEASTASFLL 768
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 96/444 (21%), Positives = 184/444 (41%), Gaps = 41/444 (9%)
Query: 97 MDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRR 156
M + ++ Y G +A L M G P+VV++++LM + GR A IF
Sbjct: 272 MTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDS 331
Query: 157 MQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKK 216
M G P TY+ +L+ + E + ++ ++ ++PD +F+++I Y K
Sbjct: 332 MTKRGLEPDIATYRTLLQGYATKGALVEMHALLDLMV---RNGIQPDHHVFNILICAYAK 388
Query: 217 AGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSKI---YDQMQRAGLQPDVVS 273
++A +F+ M + G+ + V Y +++ V ++QM GL P+++
Sbjct: 389 QEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQMIDEGLTPNIIV 448
Query: 274 YALLIN-----------------------------------AYGKARREEEALAVFEEML 298
Y LI+ ++ K R E+ +F+ M+
Sbjct: 449 YTSLIHGLCTCDKWDKAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMV 508
Query: 299 DAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDME 358
GV+P YN L+D ++G +D+A + M PDI +Y T+++ Y S M+
Sbjct: 509 RIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLINGYCRVSRMD 568
Query: 359 GAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIM 418
A F+ + G PN+ITY +++G E+Y + +G + + + I+
Sbjct: 569 DALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVSITKSGTQLELSTYNIIL 628
Query: 419 DAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNE 478
KN D A+ ++ + + + NI++ +EA +L +
Sbjct: 629 HGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKCGRMDEAKDLFAAHSANGLV 688
Query: 479 PGINGLSISVDEEDDDDDDDEDDD 502
P + S+ + + +E DD
Sbjct: 689 PDVRTYSLMAENLIEQGSLEELDD 712
>gi|125600921|gb|EAZ40497.1| hypothetical protein OsJ_24952 [Oryza sativa Japonica Group]
Length = 766
Score = 163 bits (412), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 97/318 (30%), Positives = 173/318 (54%), Gaps = 13/318 (4%)
Query: 142 GRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLK 201
R GR A A+ + P P A Y ++ F A +F++A VF ++D S ++
Sbjct: 134 ARAGRLAEASALL----DAAPGPDAGAYTALVSAFSRAGRFRDAVAVFRRMVD---SGVQ 186
Query: 202 PDQKMFHMMIYMYKK-AGGYEKARKLFALMAERGVQQSTVTYNSLMSF---ETNYKEVSK 257
P +++++++Y K A +++ +L A M E GV TYN+L+S YKE ++
Sbjct: 187 PAIVTYNVVLHVYSKMAVPWKEVVELVASMKEHGVAPDRYTYNTLISCCRRRALYKEAAQ 246
Query: 258 IYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFA 317
++D+M+ +G +PD V++ L++ YGKARR +EA+ V +EM G P+ YN L+ ++
Sbjct: 247 VFDEMKASGFEPDKVTFNSLLDVYGKARRHDEAIEVIQEMERVGCPPSVVTYNSLISSYV 306
Query: 318 ISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVI 377
G+++QA + + M PD+ +YTT++S A ++ A + + ++G PN+
Sbjct: 307 KDGLLEQAVALKQEMEVKGMKPDVVTYTTLISGLDRAGKIDAAIVEYDEMVRNGCKPNLC 366
Query: 378 TYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVV-WYKE 436
TY LIK + +MM ++D+ R G P+ + T++ +G+N DS V +KE
Sbjct: 367 TYNALIKMHGVRGKFPEMMAVFDEFRSAGFVPDIVTWNTLLAVFGQN-GLDSEVSGVFKE 425
Query: 437 MESCGFPPDQKAKNILLS 454
M+ G+ P++ L+S
Sbjct: 426 MKKAGYIPERDTYVSLIS 443
Score = 162 bits (411), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 94/355 (26%), Positives = 182/355 (51%), Gaps = 7/355 (1%)
Query: 129 PSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVE-ANKFKEAEE 187
P ++TAL+ A+ R GR+++A A+FRRM SG +P+ +TY ++L ++ + A +KE E
Sbjct: 152 PDAGAYTALVSAFSRAGRFRDAVAVFRRMVDSGVQPAIVTYNVVLHVYSKMAVPWKEVVE 211
Query: 188 VFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMS 247
+ ++ ++ + PD+ ++ +I ++ Y++A ++F M G + VT+NSL+
Sbjct: 212 LVASM---KEHGVAPDRYTYNTLISCCRRRALYKEAAQVFDEMKASGFEPDKVTFNSLLD 268
Query: 248 F---ETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRP 304
+ E ++ +M+R G P VV+Y LI++Y K E+A+A+ +EM G++P
Sbjct: 269 VYGKARRHDEAIEVIQEMERVGCPPSVVTYNSLISSYVKDGLLEQAVALKQEMEVKGMKP 328
Query: 305 THKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFF 364
Y L+ +G +D A + M R+ C P++C+Y ++ + F
Sbjct: 329 DVVTYTTLISGLDRAGKIDAAIVEYDEMVRNGCKPNLCTYNALIKMHGVRGKFPEMMAVF 388
Query: 365 RRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKN 424
+ GFVP+++T+ TL+ + + ++ ++ +M+ G P + + +++ +Y +
Sbjct: 389 DEFRSAGFVPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKKAGYIPERDTYVSLISSYSRC 448
Query: 425 KDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEP 479
FD A+ YK M G PD N +LS +A +L + +P
Sbjct: 449 GLFDLAMQIYKRMMEAGIYPDVSTYNAVLSALARGGRWEQAEKLFAEMEERDCKP 503
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 83/287 (28%), Positives = 140/287 (48%), Gaps = 11/287 (3%)
Query: 173 LKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAE 232
+++ A + EA LLD P D + ++ + +AG + A +F M +
Sbjct: 130 IRVMARAGRLAEAS----ALLDAAPGP---DAGAYTALVSAFSRAGRFRDAVAVFRRMVD 182
Query: 233 RGVQQSTVTYNSLMSFETN----YKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREE 288
GVQ + VTYN ++ + +KEV ++ M+ G+ PD +Y LI+ + +
Sbjct: 183 SGVQPAIVTYNVVLHVYSKMAVPWKEVVELVASMKEHGVAPDRYTYNTLISCCRRRALYK 242
Query: 289 EALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTML 348
EA VF+EM +G P +N LLD + + D+A V + M R C P + +Y +++
Sbjct: 243 EAAQVFDEMKASGFEPDKVTFNSLLDVYGKARRHDEAIEVIQEMERVGCPPSVVTYNSLI 302
Query: 349 SAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIK 408
S+YV +E A + ++ G P+V+TY TLI G + ++ + YD+M NG K
Sbjct: 303 SSYVKDGLLEQAVALKQEMEVKGMKPDVVTYTTLISGLDRAGKIDAAIVEYDEMVRNGCK 362
Query: 409 PNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSL 455
PN + ++ +G F + + E S GF PD N LL++
Sbjct: 363 PNLCTYNALIKMHGVRGKFPEMMAVFDEFRSAGFVPDIVTWNTLLAV 409
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 82/320 (25%), Positives = 156/320 (48%), Gaps = 6/320 (1%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
LI+ ++ + +A +V M G+ P V+ +L++ YG+ R+ A + + M+ G
Sbjct: 231 LISCCRRRALYKEAAQVFDEMKASGFEPDKVTFNSLLDVYGKARRHDEAIEVIQEMERVG 290
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
PS +TY ++ +V+ ++A + + E +KPD + +I +AG +
Sbjct: 291 CPPSVVTYNSLISSYVKDGLLEQAVALKQEM---EVKGMKPDVVTYTTLISGLDRAGKID 347
Query: 222 KARKLFALMAERGVQQSTVTYNSLMSFET---NYKEVSKIYDQMQRAGLQPDVVSYALLI 278
A + M G + + TYN+L+ + E+ ++D+ + AG PD+V++ L+
Sbjct: 348 AAIVEYDEMVRNGCKPNLCTYNALIKMHGVRGKFPEMMAVFDEFRSAGFVPDIVTWNTLL 407
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCS 338
+G+ + E VF+EM AG P Y L+ +++ G+ D A ++K M
Sbjct: 408 AVFGQNGLDSEVSGVFKEMKKAGYIPERDTYVSLISSYSRCGLFDLAMQIYKRMMEAGIY 467
Query: 339 PDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEI 398
PD+ +Y +LSA E AEK F +++ P+ +Y +L+ YA L+KM +
Sbjct: 468 PDVSTYNAVLSALARGGRWEQAEKLFAEMEERDCKPDEYSYSSLLHAYANAKRLDKMKAL 527
Query: 399 YDKMRVNGIKPNQTIFTTIM 418
D + I+P+ + T++
Sbjct: 528 SDDIYSERIEPHNWLVKTLV 547
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 88/376 (23%), Positives = 182/376 (48%), Gaps = 6/376 (1%)
Query: 97 MDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRR 156
+ + LI+ + G + A M + G P++ ++ AL++ +G G++ A+F
Sbjct: 331 VTYTTLISGLDRAGKIDAAIVEYDEMVRNGCKPNLCTYNALIKMHGVRGKFPEMMAVFDE 390
Query: 157 MQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKK 216
+S+G P +T+ +L +F + E VF + +K+ P++ + +I Y +
Sbjct: 391 FRSAGFVPDIVTWNTLLAVFGQNGLDSEVSGVFKEM---KKAGYIPERDTYVSLISSYSR 447
Query: 217 AGGYEKARKLFALMAERGVQQSTVTYNSLMSFETN---YKEVSKIYDQMQRAGLQPDVVS 273
G ++ A +++ M E G+ TYN+++S +++ K++ +M+ +PD S
Sbjct: 448 CGLFDLAMQIYKRMMEAGIYPDVSTYNAVLSALARGGRWEQAEKLFAEMEERDCKPDEYS 507
Query: 274 YALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMR 333
Y+ L++AY A+R ++ A+ +++ + P + L+ + + +A F +R
Sbjct: 508 YSSLLHAYANAKRLDKMKALSDDIYSERIEPHNWLVKTLVLVNSKVNNLAEAEKAFLELR 567
Query: 334 RDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLE 393
+ RCS DI M+S Y + EK +K+ + TY +L+ Y+++ + E
Sbjct: 568 QKRCSLDINVLNAMVSIYGKNRMVRKVEKILSLMKESAINLSAATYNSLMHMYSRLGDCE 627
Query: 394 KMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILL 453
K I +++ +G++P++ + T++ AYG+ A + EM+ G PD NI +
Sbjct: 628 KCENILTEIKSSGVRPDRYSYNTVIYAYGRKGQMKEASRLFSEMKCSGLKPDVVTYNIFV 687
Query: 454 SLAKTADERNEANELL 469
+ EA EL+
Sbjct: 688 KSYVSNSMFEEAIELV 703
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 88/335 (26%), Positives = 165/335 (49%), Gaps = 13/335 (3%)
Query: 101 MLITAYGKQG-DFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQS 159
+++ Y K + + ++++ M + G AP ++ L+ R YK A +F M++
Sbjct: 194 VVLHVYSKMAVPWKEVVELVASMKEHGVAPDRYTYNTLISCCRRRALYKEAAQVFDEMKA 253
Query: 160 SGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGG 219
SG P +T+ +L ++ +A + EA EV + E+ P ++ +I Y K G
Sbjct: 254 SGFEPDKVTFNSLLDVYGKARRHDEAIEVIQEM---ERVGCPPSVVTYNSLISSYVKDGL 310
Query: 220 YEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSKI------YDQMQRAGLQPDVVS 273
E+A L M +G++ VTY +L+S KI YD+M R G +P++ +
Sbjct: 311 LEQAVALKQEMEVKGMKPDVVTYTTLIS---GLDRAGKIDAAIVEYDEMVRNGCKPNLCT 367
Query: 274 YALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMR 333
Y LI +G + E +AVF+E AG P +N LL F +G+ + VFK M+
Sbjct: 368 YNALIKMHGVRGKFPEMMAVFDEFRSAGFVPDIVTWNTLLAVFGQNGLDSEVSGVFKEMK 427
Query: 334 RDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLE 393
+ P+ +Y +++S+Y + A + ++R+ + G P+V TY ++ A+ E
Sbjct: 428 KAGYIPERDTYVSLISSYSRCGLFDLAMQIYKRMMEAGIYPDVSTYNAVLSALARGGRWE 487
Query: 394 KMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFD 428
+ +++ +M KP++ +++++ AY K D
Sbjct: 488 QAEKLFAEMEERDCKPDEYSYSSLLHAYANAKRLD 522
Score = 131 bits (330), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 105/438 (23%), Positives = 199/438 (45%), Gaps = 43/438 (9%)
Query: 90 SWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKN 149
S ++ +++ F L+ YGK ++A +V+ M + G PSVV++ +L+ +Y + G +
Sbjct: 254 SGFEPDKVTFNSLLDVYGKARRHDEAIEVIQEMERVGCPPSVVTYNSLISSYVKDGLLEQ 313
Query: 150 AEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDE-EKSPLKPDQKMFH 208
A A+ + M+ G +P +TY ++ A K A + DE ++ KP+ ++
Sbjct: 314 AVALKQEMEVKGMKPDVVTYTTLISGLDRAGKIDAA----IVEYDEMVRNGCKPNLCTYN 369
Query: 209 MMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMS-FETNY--KEVSKIYDQMQRA 265
+I M+ G + + +F G VT+N+L++ F N EVS ++ +M++A
Sbjct: 370 ALIKMHGVRGKFPEMMAVFDEFRSAGFVPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKKA 429
Query: 266 GLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQA 325
G P+ +Y LI++Y + + A+ +++ M++AG+ P YN +L A A G +QA
Sbjct: 430 GYIPERDTYVSLISSYSRCGLFDLAMQIYKRMMEAGIYPDVSTYNAVLSALARGGRWEQA 489
Query: 326 RTVFKCMRRDRCSPDICSYTTMLSAYVNA------------------------------- 354
+F M C PD SY+++L AY NA
Sbjct: 490 EKLFAEMEERDCKPDEYSYSSLLHAYANAKRLDKMKALSDDIYSERIEPHNWLVKTLVLV 549
Query: 355 ----SDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPN 410
+++ AEK F L+Q ++ ++ Y K + K+ +I M+ + I +
Sbjct: 550 NSKVNNLAEAEKAFLELRQKRCSLDINVLNAMVSIYGKNRMVRKVEKILSLMKESAINLS 609
Query: 411 QTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLG 470
+ ++M Y + D + E++S G PD+ + N ++ + EA+ L
Sbjct: 610 AATYNSLMHMYSRLGDCEKCENILTEIKSSGVRPDRYSYNTVIYAYGRKGQMKEASRLFS 669
Query: 471 NFNHPNNEPGINGLSISV 488
+P + +I V
Sbjct: 670 EMKCSGLKPDVVTYNIFV 687
Score = 125 bits (315), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 76/339 (22%), Positives = 156/339 (46%), Gaps = 6/339 (1%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
L+ +G+ G ++ V M K GY P ++ +L+ +Y R G + A I++RM +G
Sbjct: 406 LLAVFGQNGLDSEVSGVFKEMKKAGYIPERDTYVSLISSYSRCGLFDLAMQIYKRMMEAG 465
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
P TY +L ++++AE++F + E+ KPD+ + +++ Y A +
Sbjct: 466 IYPDVSTYNAVLSALARGGRWEQAEKLFAEM---EERDCKPDEYSYSSLLHAYANAKRLD 522
Query: 222 KARKLFALMAERGVQQSTVTYNSLMSFET---NYKEVSKIYDQMQRAGLQPDVVSYALLI 278
K + L + ++ +L+ + N E K + ++++ D+ ++
Sbjct: 523 KMKALSDDIYSERIEPHNWLVKTLVLVNSKVNNLAEAEKAFLELRQKRCSLDINVLNAMV 582
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCS 338
+ YGK R + + M ++ + + YN L+ ++ G ++ + ++
Sbjct: 583 SIYGKNRMVRKVEKILSLMKESAINLSAATYNSLMHMYSRLGDCEKCENILTEIKSSGVR 642
Query: 339 PDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEI 398
PD SY T++ AY M+ A + F +K G P+V+TY +K Y + E+ +E+
Sbjct: 643 PDRYSYNTVIYAYGRKGQMKEASRLFSEMKCSGLKPDVVTYNIFVKSYVSNSMFEEAIEL 702
Query: 399 YDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEM 437
M G KPN+ + +I++ Y +N A ++ +
Sbjct: 703 VRYMVTQGCKPNERTYNSIVEGYCRNGKLTDAKIFVSNL 741
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 79/309 (25%), Positives = 141/309 (45%), Gaps = 41/309 (13%)
Query: 99 FLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQ 158
++ LI++Y + G F+ A ++ M + G P V ++ A++ A RGGR++ AE +F M+
Sbjct: 438 YVSLISSYSRCGLFDLAMQIYKRMMEAGIYPDVSTYNAVLSALARGGRWEQAEKLFAEME 497
Query: 159 SSGPRPSALTYQIILKLFVEA-----------------------------------NKFK 183
+P +Y +L + A N
Sbjct: 498 ERDCKPDEYSYSSLLHAYANAKRLDKMKALSDDIYSERIEPHNWLVKTLVLVNSKVNNLA 557
Query: 184 EAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYN 243
EAE+ F+ L + S D + + M+ +Y K K K+ +LM E + S TYN
Sbjct: 558 EAEKAFLELRQKRCSL---DINVLNAMVSIYGKNRMVRKVEKILSLMKESAINLSAATYN 614
Query: 244 SLMSFETNYKEVSK---IYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDA 300
SLM + + K I +++ +G++PD SY +I AYG+ + +EA +F EM +
Sbjct: 615 SLMHMYSRLGDCEKCENILTEIKSSGVRPDRYSYNTVIYAYGRKGQMKEASRLFSEMKCS 674
Query: 301 GVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGA 360
G++P YNI + ++ + M ++A + + M C P+ +Y +++ Y + A
Sbjct: 675 GLKPDVVTYNIFVKSYVSNSMFEEAIELVRYMVTQGCKPNERTYNSIVEGYCRNGKLTDA 734
Query: 361 EKFFRRLKQ 369
+ F L Q
Sbjct: 735 KIFVSNLPQ 743
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 72/144 (50%), Gaps = 1/144 (0%)
Query: 339 PDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVN-NLEKMME 397
PD +YT ++SA+ A A FRR+ G P ++TY ++ Y+K+ ++++E
Sbjct: 152 PDAGAYTALVSAFSRAGRFRDAVAVFRRMVDSGVQPAIVTYNVVLHVYSKMAVPWKEVVE 211
Query: 398 IYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAK 457
+ M+ +G+ P++ + T++ + + A + EM++ GF PD+ N LL +
Sbjct: 212 LVASMKEHGVAPDRYTYNTLISCCRRRALYKEAAQVFDEMKASGFEPDKVTFNSLLDVYG 271
Query: 458 TADERNEANELLGNFNHPNNEPGI 481
A +EA E++ P +
Sbjct: 272 KARRHDEAIEVIQEMERVGCPPSV 295
>gi|413949109|gb|AFW81758.1| hypothetical protein ZEAMMB73_033635 [Zea mays]
Length = 691
Score = 162 bits (411), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 102/389 (26%), Positives = 192/389 (49%), Gaps = 6/389 (1%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + +LI A +G +A +L M G P+VV++ L+ A+ R G AE +
Sbjct: 149 NVYTYNILIRALCGRGHRKEALSILRDMRGAGCGPNVVTYNTLVAAFFRAGEVDGAERLV 208
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
M G +P+ +T+ ++ +A K ++A +VF ++ E L PD ++ ++ Y
Sbjct: 209 GMMLDGGLKPNLVTFNSMVNGMCKAGKMEDARKVFDEMMREG---LAPDGVSYNTLVGGY 265
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSL---MSFETNYKEVSKIYDQMQRAGLQPDV 271
KAG +A +FA M ++G+ VT+ SL M N + + QM+ GLQ +
Sbjct: 266 CKAGCSHEALSVFAEMTQKGIMPDVVTFTSLIHVMCKAGNLEWAVTLVRQMRERGLQMNE 325
Query: 272 VSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKC 331
V++ LI+ + K ++AL M ++P+ YN L++ + + G +D+AR +
Sbjct: 326 VTFTALIDGFCKKGFLDDALLAVRGMRQCRIKPSVVCYNALINGYCMVGRMDEARELLHE 385
Query: 332 MRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNN 391
M PD+ +Y+T++SAY D A + +++ + G +P+ ITY +LI+ +
Sbjct: 386 MEAKGLKPDVVTYSTIISAYCKNCDTHSAFELNQQMLEKGVLPDAITYSSLIRVLCEEKR 445
Query: 392 LEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNI 451
L ++ M G++P++ +T+++D + K + + A+ + +M G PD ++
Sbjct: 446 LSDAHVLFKNMIKLGLQPDEFTYTSLIDGHCKEGNVERALSLHDKMVKAGVLPDVVTYSV 505
Query: 452 LLSLAKTADERNEANELLGNFNHPNNEPG 480
L++ + EA +LL H P
Sbjct: 506 LINGLSKSARAMEAQQLLFKLYHEEPIPA 534
Score = 152 bits (384), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 97/350 (27%), Positives = 170/350 (48%), Gaps = 7/350 (2%)
Query: 126 GYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEA 185
GY PSV+++ A++ A +A F M S G P+ TY I+++ KEA
Sbjct: 111 GYVPSVLAYNAVLLALSDAS-LTSARRFFDSMLSDGVAPNVYTYNILIRALCGRGHRKEA 169
Query: 186 EEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSL 245
+ L D + P+ ++ ++ + +AG + A +L +M + G++ + VT+NS+
Sbjct: 170 LSI---LRDMRGAGCGPNVVTYNTLVAAFFRAGEVDGAERLVGMMLDGGLKPNLVTFNSM 226
Query: 246 ---MSFETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGV 302
M ++ K++D+M R GL PD VSY L+ Y KA EAL+VF EM G+
Sbjct: 227 VNGMCKAGKMEDARKVFDEMMREGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGI 286
Query: 303 RPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEK 362
P + L+ +G ++ A T+ + MR + ++T ++ + ++ A
Sbjct: 287 MPDVVTFTSLIHVMCKAGNLEWAVTLVRQMRERGLQMNEVTFTALIDGFCKKGFLDDALL 346
Query: 363 FFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYG 422
R ++Q P+V+ Y LI GY V +++ E+ +M G+KP+ ++TI+ AY
Sbjct: 347 AVRGMRQCRIKPSVVCYNALINGYCMVGRMDEARELLHEMEAKGLKPDVVTYSTIISAYC 406
Query: 423 KNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNF 472
KN D SA ++M G PD + L+ + ++A+ L N
Sbjct: 407 KNCDTHSAFELNQQMLEKGVLPDAITYSSLIRVLCEEKRLSDAHVLFKNM 456
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 84/310 (27%), Positives = 144/310 (46%), Gaps = 21/310 (6%)
Query: 94 FNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAI 153
NE+ F LI + K+G + A + M + PSVV + AL+ Y GR A +
Sbjct: 323 MNEVTFTALIDGFCKKGFLDDALLAVRGMRQCRIKPSVVCYNALINGYCMVGRMDEAREL 382
Query: 154 FRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYM 213
M++ G +P +TY I+ + + A E+ +L EK L PD + +I +
Sbjct: 383 LHEMEAKGLKPDVVTYSTIISAYCKNCDTHSAFELNQQML--EKGVL-PDAITYSSLIRV 439
Query: 214 YKKAGGYEKARKLFALMAERGVQQSTVTYNSLM---SFETNYKEVSKIYDQMQRAGLQPD 270
+ A LF M + G+Q TY SL+ E N + ++D+M +AG+ PD
Sbjct: 440 LCEEKRLSDAHVLFKNMIKLGLQPDEFTYTSLIDGHCKEGNVERALSLHDKMVKAGVLPD 499
Query: 271 VVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNIL---------------LDA 315
VV+Y++LIN K+ R EA + ++ P + Y+ L L
Sbjct: 500 VVTYSVLINGLSKSARAMEAQQLLFKLYHEEPIPANTKYDALMHCCRKAELKSVLALLKG 559
Query: 316 FAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPN 375
F + G++++A V++ M + D Y+ ++ + A ++ A F +++ Q GF PN
Sbjct: 560 FCMKGLMNEADKVYQSMLDRNWNLDGSVYSVLIHGHCRAGNVMKALSFHKQMLQRGFAPN 619
Query: 376 VITYGTLIKG 385
+ +LI+G
Sbjct: 620 STSTISLIRG 629
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 68/327 (20%), Positives = 129/327 (39%), Gaps = 56/327 (17%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
LI Y G ++A ++L M KG P VV+++ ++ AY + +A + ++M G
Sbjct: 366 LINGYCMVGRMDEARELLHEMEAKGLKPDVVTYSTIISAYCKNCDTHSAFELNQQMLEKG 425
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
P A+TY ++++ E + +A +F ++ K L+PD+ + +I + K G E
Sbjct: 426 VLPDAITYSSLIRVLCEEKRLSDAHVLFKNMI---KLGLQPDEFTYTSLIDGHCKEGNVE 482
Query: 222 KARKLFALMAERGVQQSTVT-----------------------------------YNSLM 246
+A L M + GV VT Y++LM
Sbjct: 483 RALSLHDKMVKAGVLPDVVTYSVLINGLSKSARAMEAQQLLFKLYHEEPIPANTKYDALM 542
Query: 247 ------------------SFETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREE 288
+ E K+Y M D Y++LI+ + +A
Sbjct: 543 HCCRKAELKSVLALLKGFCMKGLMNEADKVYQSMLDRNWNLDGSVYSVLIHGHCRAGNVM 602
Query: 289 EALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTML 348
+AL+ ++ML G P + L+ +GMV +A V + + D + ++
Sbjct: 603 KALSFHKQMLQRGFAPNSTSTISLIRGLFENGMVVEADQVIQQLLNCCSLADAEASKALI 662
Query: 349 SAYVNASDMEGAEKFFRRLKQDGFVPN 375
+N +++ + +DG +P+
Sbjct: 663 DLNLNEGNVDAVLDVLHGMAKDGLLPS 689
>gi|359475765|ref|XP_002273555.2| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
mitochondrial-like [Vitis vinifera]
Length = 935
Score = 162 bits (411), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 120/473 (25%), Positives = 212/473 (44%), Gaps = 18/473 (3%)
Query: 8 KFMQKRRKVEVFKDAADEAGKKNWRRLMNQIE------EVGSAVAVLRSERTRGQPLPKD 61
KF + + E+ K K N R IE +G A+ +L E + +P
Sbjct: 291 KFGKMEKAAEILKGMITLGCKPNSRTFCLLIEGYCREHNMGRALELL-DEMEKRNLVPSA 349
Query: 62 LVLGTLVR-LKQLKKWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLS 120
+ G ++ L K ++ +++LE + S N + + LI Y +G +A ++L
Sbjct: 350 VSYGAMINGLCHCKDLSLANKLLEKMTF-SGLKPNVVVYSTLIMGYASEGRIEEARRLLD 408
Query: 121 FMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEAN 180
M+ G AP + + A++ + G+ + A +Q G +P A+T+ + + +
Sbjct: 409 GMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAFILGYSKTG 468
Query: 181 KFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKA----RKLFALMAERGVQ 236
K EA + F +LD L P+ ++ ++I + KAG +A R L AL VQ
Sbjct: 469 KMTEAAKYFDEMLDH---GLMPNNPLYTVLINGHFKAGNLMEALSIFRHLHALGVLPDVQ 525
Query: 237 QSTVTYNSLMSFETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEE 296
+ + L+ +E K++ +++ GL PDV +Y+ LI+ + K E+A + +E
Sbjct: 526 TCSAFIHGLLK-NGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDE 584
Query: 297 MLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASD 356
M G+ P YN L+D SG + +AR +F M PD +Y+TM+ Y + +
Sbjct: 585 MCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSEN 644
Query: 357 MEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTT 416
+ A F + G P+ Y L+ G K ++EK M ++ +M G + F T
Sbjct: 645 VAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGFATTLS-FNT 703
Query: 417 IMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELL 469
++D Y K+ A ++EM + PD ++ A + EAN L
Sbjct: 704 LIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLF 756
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 104/375 (27%), Positives = 175/375 (46%), Gaps = 12/375 (3%)
Query: 79 VSEVLEW--LRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTA 136
+ EVL + + N + + +LI K G KA ++L M G P+ +
Sbjct: 260 IDEVLRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMITLGCKPNSRTFCL 319
Query: 137 LMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVF--MTLLD 194
L+E Y R A + M+ PSA++Y ++ A ++ MT
Sbjct: 320 LIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTF-- 377
Query: 195 EEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETN--- 251
S LKP+ ++ +I Y G E+AR+L M+ GV YN+++S +
Sbjct: 378 ---SGLKPNVVVYSTLIMGYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGK 434
Query: 252 YKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNI 311
+E S ++Q GL+PD V++ I Y K + EA F+EMLD G+ P + Y +
Sbjct: 435 MEEASTYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTV 494
Query: 312 LLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDG 371
L++ +G + +A ++F+ + PD+ + + + + ++ A K F LK+ G
Sbjct: 495 LINGHFKAGNLMEALSIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKG 554
Query: 372 FVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAV 431
VP+V TY +LI G+ K +EK E++D+M + GI PN I+ ++D K+ D A
Sbjct: 555 LVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRAR 614
Query: 432 VWYKEMESCGFPPDQ 446
+ M G PD
Sbjct: 615 KLFDGMPEKGLEPDS 629
Score = 128 bits (322), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 98/396 (24%), Positives = 180/396 (45%), Gaps = 8/396 (2%)
Query: 108 KQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSAL 167
K G +A KV S + +KG P V ++++L+ + + G + A + M G P+
Sbjct: 536 KNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIF 595
Query: 168 TYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLF 227
Y ++ ++ + A ++F + EK L+PD + MI Y K+ +A LF
Sbjct: 596 IYNALVDGLCKSGDIQRARKLFDGM--PEKG-LEPDSVTYSTMIDGYCKSENVAEAFSLF 652
Query: 228 ALMAERGVQQSTVTYNSLM---SFETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKA 284
M +GVQ + YN+L+ E + ++ ++ +M + G +S+ LI+ Y K+
Sbjct: 653 HEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGFA-TTLSFNTLIDGYCKS 711
Query: 285 RREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSY 344
+ +EA +F+EM+ + P H Y ++D +G +++A +FK M+ D +Y
Sbjct: 712 CKIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVTY 771
Query: 345 TTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRV 404
T+++ Y F ++ G P+ +TYG +I + K +NL + ++ D++
Sbjct: 772 TSLMYGYNKLGQSSEVFALFEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVVG 831
Query: 405 NGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNE 464
G+ TI ++ A K +D A EM G P A + L+ A + +E
Sbjct: 832 KGMLTKGTIHDLLITALCKREDLTEASKLLDEMGELGLKPSLAACSTLVRSFHEAGKMDE 891
Query: 465 ANELLGNFNHPNNEPGINGLSISVDEEDDDDDDDED 500
A + P L I + + +D D ED
Sbjct: 892 ATRVFEGVKSLGLVPDTTTL-IDLVNGNLNDTDSED 926
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 89/405 (21%), Positives = 163/405 (40%), Gaps = 58/405 (14%)
Query: 77 NVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTA 136
+++ VL W R ++ + + F +LI +Y + G ++A V S++ +
Sbjct: 139 SILDSVLFWFR--NYGGSSPVVFDILIDSYKRMGMLDEAANVFFVAKNDSILISLIRCNS 196
Query: 137 LMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEE 196
L R M G P+ TY II A + EA+ +T + +
Sbjct: 197 L-----------------RSMGEKGLVPNTYTYTIITAGLCRAKRMNEAK---LTFEEMQ 236
Query: 197 KSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVS 256
K+ LKPD +I + + G + EV
Sbjct: 237 KTGLKPDYNACSALIDGFMREG--------------------------------DIDEVL 264
Query: 257 KIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAF 316
+I D M G+ ++++Y +LI+ K + E+A + + M+ G +P + + +L++ +
Sbjct: 265 RIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMITLGCKPNSRTFCLLIEGY 324
Query: 317 AISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNV 376
+ +A + M + P SY M++ + D+ A K ++ G PNV
Sbjct: 325 CREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNV 384
Query: 377 ITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKE 436
+ Y TLI GYA +E+ + D M +G+ P+ + I+ K + A + E
Sbjct: 385 VVYSTLIMGYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLE 444
Query: 437 MESCGFPPDQKA-KNILLSLAKTADERNEA---NELLGNFNHPNN 477
++ G PD +L +KT A +E+L + PNN
Sbjct: 445 IQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNN 489
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 78/338 (23%), Positives = 147/338 (43%), Gaps = 75/338 (22%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
L+ K GD +A K+ M +KG P V+++ +++ Y + A ++F M S G
Sbjct: 600 LVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKG 659
Query: 162 PRP----------------------------------SALTYQIILKLFVEANKFKEAEE 187
+P + L++ ++ + ++ K +EA +
Sbjct: 660 VQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGFATTLSFNTLIDGYCKSCKIQEASQ 719
Query: 188 VFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMS 247
+F ++ ++ + PD + +I + KAG E+A LF M ER + TVTY SLM
Sbjct: 720 LFQEMIAKQ---IMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVTYTSLMY 776
Query: 248 FETNY---KEVSKIYDQMQRAGLQPDVVSYALLINAYGK--------------------- 283
EV ++++M G++PD V+Y L+I A+ K
Sbjct: 777 GYNKLGQSSEVFALFEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVVGKGMLT 836
Query: 284 ------------ARREE--EALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVF 329
+RE+ EA + +EM + G++P+ A + L+ +F +G +D+A VF
Sbjct: 837 KGTIHDLLITALCKREDLTEASKLLDEMGELGLKPSLAACSTLVRSFHEAGKMDEATRVF 896
Query: 330 KCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRL 367
+ ++ PD + +++ +N +D E A ++L
Sbjct: 897 EGVKSLGLVPDTTTLIDLVNGNLNDTDSEDARNLIKQL 934
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/190 (23%), Positives = 86/190 (45%), Gaps = 8/190 (4%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
+ + + +I + K G +A + M ++ V++T+LM Y + G+ A+F
Sbjct: 732 DHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVTYTSLMYGYNKLGQSSEVFALF 791
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFH-MMIYM 213
+M + G +P +TY +++ + + EA L DE + H ++I
Sbjct: 792 EKMVAKGVKPDEVTYGLVIYAHCKEDNLVEA----FKLRDEVVGKGMLTKGTIHDLLITA 847
Query: 214 YKKAGGYEKARKLFALMAERGVQQSTVTYNSLM-SFETNYK--EVSKIYDQMQRAGLQPD 270
K +A KL M E G++ S ++L+ SF K E +++++ ++ GL PD
Sbjct: 848 LCKREDLTEASKLLDEMGELGLKPSLAACSTLVRSFHEAGKMDEATRVFEGVKSLGLVPD 907
Query: 271 VVSYALLINA 280
+ L+N
Sbjct: 908 TTTLIDLVNG 917
>gi|296081530|emb|CBI20053.3| unnamed protein product [Vitis vinifera]
Length = 634
Score = 162 bits (411), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 106/412 (25%), Positives = 195/412 (47%), Gaps = 14/412 (3%)
Query: 63 VLGTLVRLKQLK-KWNVVSEVLEWLRIQSW-WDFNEMDFLMLITAYGKQGDFNKAEKVLS 120
+L ++L +++ W + +E+ LRI S + FN +++ K+G KA + +
Sbjct: 198 MLSLFLKLNRMEMAWVLYAEMFR-LRISSTVYTFN-----IMVNVLCKEGKLKKAREFIG 251
Query: 121 FMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEAN 180
FM G+ P+VVS+ ++ Y G + A I M+ G P + TY ++ +
Sbjct: 252 FMEGLGFKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEG 311
Query: 181 KFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTV 240
+ +EA +F +++ L P+ ++ +I Y G E+A M ++G+ S
Sbjct: 312 RLEEASGLFDKMVE---IGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVS 368
Query: 241 TYNSLMS---FETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEM 297
TYN L+ E E + +M++ G+ PD ++Y +LIN Y + ++A + EM
Sbjct: 369 TYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCGNAKKAFDLHNEM 428
Query: 298 LDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDM 357
L G+ PTH Y L+ + + +A +F+ + SPD+ + M+ + ++
Sbjct: 429 LSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMVDGHCANGNV 488
Query: 358 EGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTI 417
E A + + + P+ +T+ TL++G + +E+ + D+M+ GIKP+ + T+
Sbjct: 489 ERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMKRRGIKPDHISYNTL 548
Query: 418 MDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELL 469
+ YG+ D A EM S GF P N L+ E + A ELL
Sbjct: 549 ISGYGRRGDIKDAFRVRDEMLSIGFNPTLLTYNALIKCLCKNQEGDLAEELL 600
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 90/359 (25%), Positives = 176/359 (49%), Gaps = 8/359 (2%)
Query: 98 DFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRM 157
D L+ + ++ D +A K M +KG P + + ++ + + R + A ++ M
Sbjct: 161 DLLVRVCCELRRAD--EAFKCFYMMKEKGIVPKIETCNDMLSLFLKLNRMEMAWVLYAEM 218
Query: 158 QSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKA 217
+ T+ I++ + + K K+A E F+ + E KP+ ++ +I+ Y
Sbjct: 219 FRLRISSTVYTFNIMVNVLCKEGKLKKARE-FIGFM--EGLGFKPNVVSYNTIIHGYSSR 275
Query: 218 GGYEKARKLFALMAERGVQQSTVTYNSLMSF---ETNYKEVSKIYDQMQRAGLQPDVVSY 274
G E AR++ M +G++ + TY SL+S E +E S ++D+M GL P+ V+Y
Sbjct: 276 GNIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTY 335
Query: 275 ALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRR 334
LI+ Y E A + +EM+ G+ P+ YN+L+ A + G + +A + K MR+
Sbjct: 336 NTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRK 395
Query: 335 DRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEK 394
PD +Y +++ Y + + A + G P +TY +LI ++ N +++
Sbjct: 396 KGIIPDAITYNILINGYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKE 455
Query: 395 MMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILL 453
++++K+ G+ P+ +F ++D + N + + A + KEM+ PPD+ N L+
Sbjct: 456 ADDLFEKILDQGVSPDVIMFNAMVDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLM 514
>gi|115473111|ref|NP_001060154.1| Os07g0590600 [Oryza sativa Japonica Group]
gi|34393454|dbj|BAC82993.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113611690|dbj|BAF22068.1| Os07g0590600 [Oryza sativa Japonica Group]
Length = 784
Score = 162 bits (411), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 97/318 (30%), Positives = 173/318 (54%), Gaps = 13/318 (4%)
Query: 142 GRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLK 201
R GR A A+ + P P A Y ++ F A +F++A VF ++D S ++
Sbjct: 152 ARAGRLAEASALL----DAAPGPDAGAYTALVSAFSRAGRFRDAVAVFRRMVD---SGVQ 204
Query: 202 PDQKMFHMMIYMYKK-AGGYEKARKLFALMAERGVQQSTVTYNSLMSF---ETNYKEVSK 257
P +++++++Y K A +++ +L A M E GV TYN+L+S YKE ++
Sbjct: 205 PAIVTYNVVLHVYSKMAVPWKEVVELVASMKEHGVAPDRYTYNTLISCCRRRALYKEAAQ 264
Query: 258 IYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFA 317
++D+M+ +G +PD V++ L++ YGKARR +EA+ V +EM G P+ YN L+ ++
Sbjct: 265 VFDEMKASGFEPDKVTFNSLLDVYGKARRHDEAIEVIQEMERVGCPPSVVTYNSLISSYV 324
Query: 318 ISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVI 377
G+++QA + + M PD+ +YTT++S A ++ A + + ++G PN+
Sbjct: 325 KDGLLEQAVALKQEMEVKGMKPDVVTYTTLISGLDRAGKIDAAIVEYDEMVRNGCKPNLC 384
Query: 378 TYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVV-WYKE 436
TY LIK + +MM ++D+ R G P+ + T++ +G+N DS V +KE
Sbjct: 385 TYNALIKMHGVRGKFPEMMAVFDEFRSAGFVPDIVTWNTLLAVFGQN-GLDSEVSGVFKE 443
Query: 437 MESCGFPPDQKAKNILLS 454
M+ G+ P++ L+S
Sbjct: 444 MKKAGYIPERDTYVSLIS 461
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 90/332 (27%), Positives = 153/332 (46%), Gaps = 11/332 (3%)
Query: 128 APSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEE 187
AP + + + + G+ G A R + G +++ A + EA
Sbjct: 103 APELAAVVGALGSRGQPGAALAALHAARELHGEGVLHHPRVLATAIRVMARAGRLAEAS- 161
Query: 188 VFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMS 247
LLD P D + ++ + +AG + A +F M + GVQ + VTYN ++
Sbjct: 162 ---ALLDAAPGP---DAGAYTALVSAFSRAGRFRDAVAVFRRMVDSGVQPAIVTYNVVLH 215
Query: 248 FETN----YKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVR 303
+ +KEV ++ M+ G+ PD +Y LI+ + +EA VF+EM +G
Sbjct: 216 VYSKMAVPWKEVVELVASMKEHGVAPDRYTYNTLISCCRRRALYKEAAQVFDEMKASGFE 275
Query: 304 PTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKF 363
P +N LLD + + D+A V + M R C P + +Y +++S+YV +E A
Sbjct: 276 PDKVTFNSLLDVYGKARRHDEAIEVIQEMERVGCPPSVVTYNSLISSYVKDGLLEQAVAL 335
Query: 364 FRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGK 423
+ ++ G P+V+TY TLI G + ++ + YD+M NG KPN + ++ +G
Sbjct: 336 KQEMEVKGMKPDVVTYTTLISGLDRAGKIDAAIVEYDEMVRNGCKPNLCTYNALIKMHGV 395
Query: 424 NKDFDSAVVWYKEMESCGFPPDQKAKNILLSL 455
F + + E S GF PD N LL++
Sbjct: 396 RGKFPEMMAVFDEFRSAGFVPDIVTWNTLLAV 427
Score = 135 bits (340), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 100/405 (24%), Positives = 185/405 (45%), Gaps = 11/405 (2%)
Query: 21 DAADEAGKKNWRRLMNQIEEVGS---AVAVLRSERTRG-QPLPKDLVLGTLVRLKQLKKW 76
DAA + L++ G AVAV R G QP + V K W
Sbjct: 165 DAAPGPDAGAYTALVSAFSRAGRFRDAVAVFRRMVDSGVQPAIVTYNVVLHVYSKMAVPW 224
Query: 77 NVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTA 136
V E++ ++ + + + LI+ ++ + +A +V M G+ P V+ +
Sbjct: 225 KEVVELVASMK-EHGVAPDRYTYNTLISCCRRRALYKEAAQVFDEMKASGFEPDKVTFNS 283
Query: 137 LMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEE 196
L++ YG+ R+ A + + M+ G PS +TY ++ +V+ ++A + + E
Sbjct: 284 LLDVYGKARRHDEAIEVIQEMERVGCPPSVVTYNSLISSYVKDGLLEQAVALKQEM---E 340
Query: 197 KSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFET---NYK 253
+KPD + +I +AG + A + M G + + TYN+L+ +
Sbjct: 341 VKGMKPDVVTYTTLISGLDRAGKIDAAIVEYDEMVRNGCKPNLCTYNALIKMHGVRGKFP 400
Query: 254 EVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILL 313
E+ ++D+ + AG PD+V++ L+ +G+ + E VF+EM AG P Y L+
Sbjct: 401 EMMAVFDEFRSAGFVPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKKAGYIPERDTYVSLI 460
Query: 314 DAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFV 373
+++ G+ D A ++K M PD+ +Y +LSA E AEK F +++
Sbjct: 461 SSYSRCGLFDLAMQIYKRMMEAGIYPDVSTYNAVLSALARGGRWEQAEKLFAEMEERDCK 520
Query: 374 PNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIM 418
P+ +Y +L+ YA L+KM + D + I+P+ + T++
Sbjct: 521 PDEYSYSSLLHAYANAKRLDKMKALSDDIYSERIEPHNWLVKTLV 565
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 88/376 (23%), Positives = 182/376 (48%), Gaps = 6/376 (1%)
Query: 97 MDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRR 156
+ + LI+ + G + A M + G P++ ++ AL++ +G G++ A+F
Sbjct: 349 VTYTTLISGLDRAGKIDAAIVEYDEMVRNGCKPNLCTYNALIKMHGVRGKFPEMMAVFDE 408
Query: 157 MQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKK 216
+S+G P +T+ +L +F + E VF + +K+ P++ + +I Y +
Sbjct: 409 FRSAGFVPDIVTWNTLLAVFGQNGLDSEVSGVFKEM---KKAGYIPERDTYVSLISSYSR 465
Query: 217 AGGYEKARKLFALMAERGVQQSTVTYNSLMSFETN---YKEVSKIYDQMQRAGLQPDVVS 273
G ++ A +++ M E G+ TYN+++S +++ K++ +M+ +PD S
Sbjct: 466 CGLFDLAMQIYKRMMEAGIYPDVSTYNAVLSALARGGRWEQAEKLFAEMEERDCKPDEYS 525
Query: 274 YALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMR 333
Y+ L++AY A+R ++ A+ +++ + P + L+ + + +A F +R
Sbjct: 526 YSSLLHAYANAKRLDKMKALSDDIYSERIEPHNWLVKTLVLVNSKVNNLAEAEKAFLELR 585
Query: 334 RDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLE 393
+ RCS DI M+S Y + EK +K+ + TY +L+ Y+++ + E
Sbjct: 586 QKRCSLDINVLNAMVSIYGKNRMVRKVEKILSLMKESAINLSAATYNSLMHMYSRLGDCE 645
Query: 394 KMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILL 453
K I +++ +G++P++ + T++ AYG+ A + EM+ G PD NI +
Sbjct: 646 KCENILTEIKSSGVRPDRYSYNTVIYAYGRKGQMKEASRLFSEMKCSGLKPDVVTYNIFV 705
Query: 454 SLAKTADERNEANELL 469
+ EA EL+
Sbjct: 706 KSYVSNSMFEEAIELV 721
Score = 132 bits (331), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 86/318 (27%), Positives = 158/318 (49%), Gaps = 12/318 (3%)
Query: 117 KVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLF 176
++++ M + G AP ++ L+ R YK A +F M++SG P +T+ +L ++
Sbjct: 229 ELVASMKEHGVAPDRYTYNTLISCCRRRALYKEAAQVFDEMKASGFEPDKVTFNSLLDVY 288
Query: 177 VEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQ 236
+A + EA EV + E+ P ++ +I Y K G E+A L M +G++
Sbjct: 289 GKARRHDEAIEVIQEM---ERVGCPPSVVTYNSLISSYVKDGLLEQAVALKQEMEVKGMK 345
Query: 237 QSTVTYNSLMSFETNYKEVSKI------YDQMQRAGLQPDVVSYALLINAYGKARREEEA 290
VTY +L+S KI YD+M R G +P++ +Y LI +G + E
Sbjct: 346 PDVVTYTTLIS---GLDRAGKIDAAIVEYDEMVRNGCKPNLCTYNALIKMHGVRGKFPEM 402
Query: 291 LAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSA 350
+AVF+E AG P +N LL F +G+ + VFK M++ P+ +Y +++S+
Sbjct: 403 MAVFDEFRSAGFVPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKKAGYIPERDTYVSLISS 462
Query: 351 YVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPN 410
Y + A + ++R+ + G P+V TY ++ A+ E+ +++ +M KP+
Sbjct: 463 YSRCGLFDLAMQIYKRMMEAGIYPDVSTYNAVLSALARGGRWEQAEKLFAEMEERDCKPD 522
Query: 411 QTIFTTIMDAYGKNKDFD 428
+ +++++ AY K D
Sbjct: 523 EYSYSSLLHAYANAKRLD 540
Score = 131 bits (330), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 91/340 (26%), Positives = 173/340 (50%), Gaps = 8/340 (2%)
Query: 90 SWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKN 149
S ++ +++ F L+ YGK ++A +V+ M + G PSVV++ +L+ +Y + G +
Sbjct: 272 SGFEPDKVTFNSLLDVYGKARRHDEAIEVIQEMERVGCPPSVVTYNSLISSYVKDGLLEQ 331
Query: 150 AEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDE-EKSPLKPDQKMFH 208
A A+ + M+ G +P +TY ++ A K A + DE ++ KP+ ++
Sbjct: 332 AVALKQEMEVKGMKPDVVTYTTLISGLDRAGKIDAA----IVEYDEMVRNGCKPNLCTYN 387
Query: 209 MMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMS-FETNY--KEVSKIYDQMQRA 265
+I M+ G + + +F G VT+N+L++ F N EVS ++ +M++A
Sbjct: 388 ALIKMHGVRGKFPEMMAVFDEFRSAGFVPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKKA 447
Query: 266 GLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQA 325
G P+ +Y LI++Y + + A+ +++ M++AG+ P YN +L A A G +QA
Sbjct: 448 GYIPERDTYVSLISSYSRCGLFDLAMQIYKRMMEAGIYPDVSTYNAVLSALARGGRWEQA 507
Query: 326 RTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKG 385
+F M C PD SY+++L AY NA ++ + + + P+ TL+
Sbjct: 508 EKLFAEMEERDCKPDEYSYSSLLHAYANAKRLDKMKALSDDIYSERIEPHNWLVKTLVLV 567
Query: 386 YAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNK 425
+KVNNL + + + ++R + + ++ YGKN+
Sbjct: 568 NSKVNNLAEAEKAFLELRQKRCSLDINVLNAMVSIYGKNR 607
Score = 125 bits (314), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 76/339 (22%), Positives = 156/339 (46%), Gaps = 6/339 (1%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
L+ +G+ G ++ V M K GY P ++ +L+ +Y R G + A I++RM +G
Sbjct: 424 LLAVFGQNGLDSEVSGVFKEMKKAGYIPERDTYVSLISSYSRCGLFDLAMQIYKRMMEAG 483
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
P TY +L ++++AE++F + E+ KPD+ + +++ Y A +
Sbjct: 484 IYPDVSTYNAVLSALARGGRWEQAEKLFAEM---EERDCKPDEYSYSSLLHAYANAKRLD 540
Query: 222 KARKLFALMAERGVQQSTVTYNSLMSFET---NYKEVSKIYDQMQRAGLQPDVVSYALLI 278
K + L + ++ +L+ + N E K + ++++ D+ ++
Sbjct: 541 KMKALSDDIYSERIEPHNWLVKTLVLVNSKVNNLAEAEKAFLELRQKRCSLDINVLNAMV 600
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCS 338
+ YGK R + + M ++ + + YN L+ ++ G ++ + ++
Sbjct: 601 SIYGKNRMVRKVEKILSLMKESAINLSAATYNSLMHMYSRLGDCEKCENILTEIKSSGVR 660
Query: 339 PDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEI 398
PD SY T++ AY M+ A + F +K G P+V+TY +K Y + E+ +E+
Sbjct: 661 PDRYSYNTVIYAYGRKGQMKEASRLFSEMKCSGLKPDVVTYNIFVKSYVSNSMFEEAIEL 720
Query: 399 YDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEM 437
M G KPN+ + +I++ Y +N A ++ +
Sbjct: 721 VRYMVTQGCKPNERTYNSIVEGYCRNGKLTDAKIFVSNL 759
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 79/309 (25%), Positives = 141/309 (45%), Gaps = 41/309 (13%)
Query: 99 FLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQ 158
++ LI++Y + G F+ A ++ M + G P V ++ A++ A RGGR++ AE +F M+
Sbjct: 456 YVSLISSYSRCGLFDLAMQIYKRMMEAGIYPDVSTYNAVLSALARGGRWEQAEKLFAEME 515
Query: 159 SSGPRPSALTYQIILKLFVEA-----------------------------------NKFK 183
+P +Y +L + A N
Sbjct: 516 ERDCKPDEYSYSSLLHAYANAKRLDKMKALSDDIYSERIEPHNWLVKTLVLVNSKVNNLA 575
Query: 184 EAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYN 243
EAE+ F+ L + S D + + M+ +Y K K K+ +LM E + S TYN
Sbjct: 576 EAEKAFLELRQKRCSL---DINVLNAMVSIYGKNRMVRKVEKILSLMKESAINLSAATYN 632
Query: 244 SLMSFETNYKEVSK---IYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDA 300
SLM + + K I +++ +G++PD SY +I AYG+ + +EA +F EM +
Sbjct: 633 SLMHMYSRLGDCEKCENILTEIKSSGVRPDRYSYNTVIYAYGRKGQMKEASRLFSEMKCS 692
Query: 301 GVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGA 360
G++P YNI + ++ + M ++A + + M C P+ +Y +++ Y + A
Sbjct: 693 GLKPDVVTYNIFVKSYVSNSMFEEAIELVRYMVTQGCKPNERTYNSIVEGYCRNGKLTDA 752
Query: 361 EKFFRRLKQ 369
+ F L Q
Sbjct: 753 KIFVSNLPQ 761
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 72/144 (50%), Gaps = 1/144 (0%)
Query: 339 PDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVN-NLEKMME 397
PD +YT ++SA+ A A FRR+ G P ++TY ++ Y+K+ ++++E
Sbjct: 170 PDAGAYTALVSAFSRAGRFRDAVAVFRRMVDSGVQPAIVTYNVVLHVYSKMAVPWKEVVE 229
Query: 398 IYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAK 457
+ M+ +G+ P++ + T++ + + A + EM++ GF PD+ N LL +
Sbjct: 230 LVASMKEHGVAPDRYTYNTLISCCRRRALYKEAAQVFDEMKASGFEPDKVTFNSLLDVYG 289
Query: 458 TADERNEANELLGNFNHPNNEPGI 481
A +EA E++ P +
Sbjct: 290 KARRHDEAIEVIQEMERVGCPPSV 313
>gi|224126121|ref|XP_002329666.1| predicted protein [Populus trichocarpa]
gi|222870547|gb|EEF07678.1| predicted protein [Populus trichocarpa]
Length = 821
Score = 162 bits (411), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 102/363 (28%), Positives = 181/363 (49%), Gaps = 10/363 (2%)
Query: 107 GKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSA 166
G++ + A K+ + Y+ V ++T ++ +Y R G+Y+ A AIF +M SG P+
Sbjct: 185 GRESQHSIASKLFDVIPLDDYSLDVRAYTTILHSYSRCGKYERAVAIFEKMNESGLSPTL 244
Query: 167 LTYQIILKLFVEANKFKEAEEVFMTLLDEEKSP-LKPDQKMFHMMIYMYKKAGGYEKARK 225
+TY ++L ++ K + + LLDE +S L D+ +I + G ++A++
Sbjct: 245 VTYNVMLDVY---GKMGRSWNKILGLLDEMRSKGLGFDEFTCSTVISACGREGLLDEAKE 301
Query: 226 LFALMAERGVQQSTVTYNSLMSFETN---YKEVSKIYDQMQRAGLQPDVVSYALLINAYG 282
F + +G TVTYN+L+ Y E I +M+ PD V+Y L+ AY
Sbjct: 302 FFVGLKSQGYAPGTVTYNALLQVFGKAGIYSEALSIMKEMEDNNCPPDAVTYNELVAAYV 361
Query: 283 KARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDIC 342
+A EE A+ + M + G++P Y +++A+ + VD+A +++ M+ C+P++C
Sbjct: 362 RAGFYEEGAALIDTMTENGIKPNAVTYTTMINAYGRAAQVDKALSLYDQMKESGCAPNVC 421
Query: 343 SYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKM 402
+Y +L S E K +K DG PN IT+ T++ + + ++ +M
Sbjct: 422 TYNAILGMLGKKSQSEEMMKILCDMKVDGCAPNRITWNTMLSMCGNKGMHKYVKRVFQEM 481
Query: 403 RVNGIKPNQTIFTTIMDAYGK-NKDFDSAVVWYKEMESCGFPPDQKAKNILL-SLAKTAD 460
+ G +P++ F T++ A G+ D D+ + Y EM GF P N LL +LA+ D
Sbjct: 482 KSCGFEPDRDTFNTLITASGRCGSDIDAEKI-YDEMLEAGFTPSVATYNALLNALARRGD 540
Query: 461 ERN 463
R
Sbjct: 541 WRT 543
Score = 161 bits (408), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 106/437 (24%), Positives = 201/437 (45%), Gaps = 42/437 (9%)
Query: 71 KQLKKWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPS 130
K + WN + +L+ +R + F+E +I+A G++G ++A++ + +GYAP
Sbjct: 256 KMGRSWNKILGLLDEMRSKGL-GFDEFTCSTVISACGREGLLDEAKEFFVGLKSQGYAPG 314
Query: 131 VVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFM 190
V++ AL++ +G+ G Y A +I + M+ + P A+TY ++ +V A ++E +
Sbjct: 315 TVTYNALLQVFGKAGIYSEALSIMKEMEDNNCPPDAVTYNELVAAYVRAGFYEEGAALID 374
Query: 191 TLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSF-- 248
T+ + + +KP+ + MI Y +A +KA L+ M E G + TYN+++
Sbjct: 375 TMTE---NGIKPNAVTYTTMINAYGRAAQVDKALSLYDQMKESGCAPNVCTYNAILGMLG 431
Query: 249 ------------------------------------ETNYKEVSKIYDQMQRAGLQPDVV 272
+ +K V +++ +M+ G +PD
Sbjct: 432 KKSQSEEMMKILCDMKVDGCAPNRITWNTMLSMCGNKGMHKYVKRVFQEMKSCGFEPDRD 491
Query: 273 SYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCM 332
++ LI A G+ + +A +++EML+AG P+ YN LL+A A G A +V K M
Sbjct: 492 TFNTLITASGRCGSDIDAEKIYDEMLEAGFTPSVATYNALLNALARRGDWRTAESVIKDM 551
Query: 333 RRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNL 392
+ P SY+ +L++Y ++G + + + P+ + TLI K L
Sbjct: 552 KNKGFKPSETSYSLILNSYAKGGYVKGINRIEKDIYDGHIFPSWMLLRTLILANFKCRAL 611
Query: 393 EKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNIL 452
M + ++ +G KP+ +F +++ + + D A ++ CG PD N L
Sbjct: 612 AGMERAFQALQKHGYKPDLVVFNSMLSMFSRKNMHDRAHEIMHLIQECGLQPDLVTYNSL 671
Query: 453 LSLAKTADERNEANELL 469
+ L E +A E+L
Sbjct: 672 MDLYARGGECWKAEEIL 688
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 88/360 (24%), Positives = 181/360 (50%), Gaps = 7/360 (1%)
Query: 99 FLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGR-YKNAEAIFRRM 157
+ ++ +Y + G + +A + MN+ G +P++V++ +++ YG+ GR + + M
Sbjct: 212 YTTILHSYSRCGKYERAVAIFEKMNESGLSPTLVTYNVMLDVYGKMGRSWNKILGLLDEM 271
Query: 158 QSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKA 217
+S G T ++ EA+E F+ L + P ++ ++ ++ KA
Sbjct: 272 RSKGLGFDEFTCSTVISACGREGLLDEAKEFFVGL---KSQGYAPGTVTYNALLQVFGKA 328
Query: 218 GGYEKARKLFALMAERGVQQSTVTYNSLMSFETN---YKEVSKIYDQMQRAGLQPDVVSY 274
G Y +A + M + VTYN L++ Y+E + + D M G++P+ V+Y
Sbjct: 329 GIYSEALSIMKEMEDNNCPPDAVTYNELVAAYVRAGFYEEGAALIDTMTENGIKPNAVTY 388
Query: 275 ALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRR 334
+INAYG+A + ++AL+++++M ++G P YN +L ++ + M+
Sbjct: 389 TTMINAYGRAAQVDKALSLYDQMKESGCAPNVCTYNAILGMLGKKSQSEEMMKILCDMKV 448
Query: 335 DRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEK 394
D C+P+ ++ TMLS N + ++ F+ +K GF P+ T+ TLI + +
Sbjct: 449 DGCAPNRITWNTMLSMCGNKGMHKYVKRVFQEMKSCGFEPDRDTFNTLITASGRCGSDID 508
Query: 395 MMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLS 454
+IYD+M G P+ + +++A + D+ +A K+M++ GF P + + +++L+
Sbjct: 509 AEKIYDEMLEAGFTPSVATYNALLNALARRGDWRTAESVIKDMKNKGFKPSETSYSLILN 568
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 83/355 (23%), Positives = 179/355 (50%), Gaps = 6/355 (1%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
L+ AY + G + + ++ M + G P+ V++T ++ AYGR + A +++ +M+ SG
Sbjct: 356 LVAAYVRAGFYEEGAALIDTMTENGIKPNAVTYTTMINAYGRAAQVDKALSLYDQMKESG 415
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
P+ TY IL + K ++EE+ L D + P++ ++ M+ M G ++
Sbjct: 416 CAPNVCTYNAILGML---GKKSQSEEMMKILCDMKVDGCAPNRITWNTMLSMCGNKGMHK 472
Query: 222 KARKLFALMAERGVQQSTVTYNSLMSFETNYK---EVSKIYDQMQRAGLQPDVVSYALLI 278
+++F M G + T+N+L++ + KIYD+M AG P V +Y L+
Sbjct: 473 YVKRVFQEMKSCGFEPDRDTFNTLITASGRCGSDIDAEKIYDEMLEAGFTPSVATYNALL 532
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCS 338
NA + A +V ++M + G +P+ +Y+++L+++A G V + K +
Sbjct: 533 NALARRGDWRTAESVIKDMKNKGFKPSETSYSLILNSYAKGGYVKGINRIEKDIYDGHIF 592
Query: 339 PDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEI 398
P T++ A + G E+ F+ L++ G+ P+++ + +++ +++ N ++ EI
Sbjct: 593 PSWMLLRTLILANFKCRALAGMERAFQALQKHGYKPDLVVFNSMLSMFSRKNMHDRAHEI 652
Query: 399 YDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILL 453
++ G++P+ + ++MD Y + + A +E+++ G D + N ++
Sbjct: 653 MHLIQECGLQPDLVTYNSLMDLYARGGECWKAEEILRELQNSGDKSDLISYNTVI 707
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 81/300 (27%), Positives = 134/300 (44%), Gaps = 35/300 (11%)
Query: 99 FLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQ 158
F LITA G+ G AEK+ M + G+ PSV ++ AL+ A R G ++ AE++ + M+
Sbjct: 493 FNTLITASGRCGSDIDAEKIYDEMLEAGFTPSVATYNALLNALARRGDWRTAESVIKDMK 552
Query: 159 SSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSP------------------- 199
+ G +PS +Y +IL + + K + + D P
Sbjct: 553 NKGFKPSETSYSLILNSYAKGGYVKGINRIEKDIYDGHIFPSWMLLRTLILANFKCRALA 612
Query: 200 -------------LKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLM 246
KPD +F+ M+ M+ + +++A ++ L+ E G+Q VTYNSLM
Sbjct: 613 GMERAFQALQKHGYKPDLVVFNSMLSMFSRKNMHDRAHEIMHLIQECGLQPDLVTYNSLM 672
Query: 247 SFETNYKEVSK---IYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVR 303
E K I ++Q +G + D++SY +I + + EAL EM+ G+R
Sbjct: 673 DLYARGGECWKAEEILRELQNSGDKSDLISYNTVIKGFCRQGLMHEALRTLSEMISRGIR 732
Query: 304 PTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKF 363
P YN + +A GM + V M + C P+ +Y ++ Y A + A F
Sbjct: 733 PCIVTYNTFVGGYAAKGMFAEIDEVLSYMTKHDCRPNELTYKIVVDGYCKAKKFKEAMDF 792
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 61/261 (23%), Positives = 118/261 (45%), Gaps = 36/261 (13%)
Query: 245 LMSFETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRP 304
++ E+ + SK++D + DV +Y ++++Y + + E A+A+FE+M ++G+ P
Sbjct: 183 ILGRESQHSIASKLFDVIPLDDYSLDVRAYTTILHSYSRCGKYERAVAIFEKMNESGLSP 242
Query: 305 THKAYNILLDAFA-------------------------------IS-----GMVDQARTV 328
T YN++LD + IS G++D+A+
Sbjct: 243 TLVTYNVMLDVYGKMGRSWNKILGLLDEMRSKGLGFDEFTCSTVISACGREGLLDEAKEF 302
Query: 329 FKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAK 388
F ++ +P +Y +L + A A + ++ + P+ +TY L+ Y +
Sbjct: 303 FVGLKSQGYAPGTVTYNALLQVFGKAGIYSEALSIMKEMEDNNCPPDAVTYNELVAAYVR 362
Query: 389 VNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKA 448
E+ + D M NGIKPN +TT+++AYG+ D A+ Y +M+ G P+
Sbjct: 363 AGFYEEGAALIDTMTENGIKPNAVTYTTMINAYGRAAQVDKALSLYDQMKESGCAPNVCT 422
Query: 449 KNILLSLAKTADERNEANELL 469
N +L + + E ++L
Sbjct: 423 YNAILGMLGKKSQSEEMMKIL 443
Score = 75.5 bits (184), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 46/201 (22%), Positives = 96/201 (47%), Gaps = 6/201 (2%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
LI A K E+ + K GY P +V +++ + R + A I +Q G
Sbjct: 601 LILANFKCRALAGMERAFQALQKHGYKPDLVVFNSMLSMFSRKNMHDRAHEIMHLIQECG 660
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
+P +TY ++ L+ + +AEE+ L + S K D ++ +I + + G
Sbjct: 661 LQPDLVTYNSLMDLYARGGECWKAEEILREL---QNSGDKSDLISYNTVIKGFCRQGLMH 717
Query: 222 KARKLFALMAERGVQQSTVTYNSLM---SFETNYKEVSKIYDQMQRAGLQPDVVSYALLI 278
+A + + M RG++ VTYN+ + + + + E+ ++ M + +P+ ++Y +++
Sbjct: 718 EALRTLSEMISRGIRPCIVTYNTFVGGYAAKGMFAEIDEVLSYMTKHDCRPNELTYKIVV 777
Query: 279 NAYGKARREEEALAVFEEMLD 299
+ Y KA++ +EA+ + D
Sbjct: 778 DGYCKAKKFKEAMDFVSTITD 798
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 51/97 (52%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
+I + +QG ++A + LS M +G P +V++ + Y G + + + M
Sbjct: 706 VIKGFCRQGLMHEALRTLSEMISRGIRPCIVTYNTFVGGYAAKGMFAEIDEVLSYMTKHD 765
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKS 198
RP+ LTY+I++ + +A KFKEA + T+ D + S
Sbjct: 766 CRPNELTYKIVVDGYCKAKKFKEAMDFVSTITDIDDS 802
>gi|215794293|gb|ACJ70132.1| restorer-of-fertility [Brassica napus]
Length = 667
Score = 162 bits (410), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 133/529 (25%), Positives = 228/529 (43%), Gaps = 61/529 (11%)
Query: 5 APRKFMQKRRKVEVFKDAADEAGKKNWRRL-----MNQIEEVGSAVAVLRSERTRGQPLP 59
A R F + + + K ++ +AG RL ++I+ + A+ L R +PLP
Sbjct: 16 AARLFCTRSIRHTLAKKSSGKAGGFGGERLKLQSGFHEIKGLDDAID-LFGYMVRSRPLP 74
Query: 60 KDL----VLGTLVRLKQLKKWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKA 115
+ +LG +VR+++ + +E RI N F +LI + A
Sbjct: 75 CVIDFCKLLGVVVRMERPDVVISLHRKMEMRRIPC----NIYSFTILIKCFCSCSKLPFA 130
Query: 116 EKVLSFMNKKGYAPS-------------------------------VVSHTALMEAYGRG 144
+ K G+ PS V++ T LM R
Sbjct: 131 LSTFGKITKLGFHPSLVTFSTLLHGLCVEDRVSEALHFFHQICKPNVIAFTTLMNGLCRE 190
Query: 145 GRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQ 204
GR A A+ RM G +P+ +TY I+ + A + + EE S +KP+
Sbjct: 191 GRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKM--EEVSRIKPNV 248
Query: 205 KMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMS-FETN--YKEVSKIYDQ 261
++ +I K G A+ LF+ M E+G+ + TYN +++ F ++ + E ++ +
Sbjct: 249 VIYSAIIDGLWKDGRQTDAQNLFSEMQEKGISPNLFTYNCMINGFCSSGRWSEAQRLLRE 308
Query: 262 MQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGM 321
M + PDVV++++LINA K + EA ++ EML G+ P YN ++D F+
Sbjct: 309 MFERKMSPDVVTFSVLINALVKEGKFFEAEELYNEMLPRGIIPNTITYNSMIDGFSKQNR 368
Query: 322 VDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGT 381
+D A +F M CSPD+ +++ ++ Y A ++ K + + G V N ITY T
Sbjct: 369 LDAAERMFYLMATKGCSPDVITFSILIDGYCGAKRVDDGMKLLHEMSRRGLVANTITYTT 428
Query: 382 LIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMES-- 439
LI G+ ++ NL +++ +M +G+ PN T++D N A+ +K M+
Sbjct: 429 LIHGFCQLGNLNAALDLLQEMISSGVCPNVVTCNTLLDGLCNNGKLKDALEMFKVMQKSK 488
Query: 440 ----CGFP-----PDQKAKNILLSLAKTADERNEANELLGNFNHPNNEP 479
P PD + NIL+ + +EA EL H P
Sbjct: 489 MDLDASHPFNDVEPDVQTYNILICGLINEGKFSEAEELYEEMPHRGLVP 537
Score = 155 bits (392), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 107/428 (25%), Positives = 198/428 (46%), Gaps = 28/428 (6%)
Query: 31 WRRLMNQIEEVGSAV-AVLRSERTRGQPL-PKDLVLGTLV-----RLKQLKKWNVVSEVL 83
+ LMN + G V AV +R L P + GT+V + N++ ++
Sbjct: 180 FTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKME 239
Query: 84 EWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGR 143
E RI+ N + + +I K G A+ + S M +KG +P++ ++ ++ +
Sbjct: 240 EVSRIKP----NVVIYSAIIDGLWKDGRQTDAQNLFSEMQEKGISPNLFTYNCMINGFCS 295
Query: 144 GGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPD 203
GR+ A+ + R M P +T+ +++ V+ KF EAEE++ +L + P+
Sbjct: 296 SGRWSEAQRLLREMFERKMSPDVVTFSVLINALVKEGKFFEAEELYNEMLPRG---IIPN 352
Query: 204 QKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVS---KIYD 260
++ MI + K + A ++F LMA +G +T++ L+ K V K+
Sbjct: 353 TITYNSMIDGFSKQNRLDAAERMFYLMATKGCSPDVITFSILIDGYCGAKRVDDGMKLLH 412
Query: 261 QMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISG 320
+M R GL + ++Y LI+ + + AL + +EM+ +GV P N LLD +G
Sbjct: 413 EMSRRGLVANTITYTTLIHGFCQLGNLNAALDLLQEMISSGVCPNVVTCNTLLDGLCNNG 472
Query: 321 MVDQARTVFKCMRRDR-----------CSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQ 369
+ A +FK M++ + PD+ +Y ++ +N AE+ + +
Sbjct: 473 KLKDALEMFKVMQKSKMDLDASHPFNDVEPDVQTYNILICGLINEGKFSEAEELYEEMPH 532
Query: 370 DGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDS 429
G VP+ ITY ++I G K + L++ +++D M G P+ FTT+++ Y K
Sbjct: 533 RGLVPDTITYNSVIDGLCKQSRLDEATQMFDSMGSKGFSPDVVTFTTLINGYCKVGRVGD 592
Query: 430 AVVWYKEM 437
+ + EM
Sbjct: 593 GLEVFCEM 600
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 87/350 (24%), Positives = 167/350 (47%), Gaps = 19/350 (5%)
Query: 97 MDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRR 156
+ F +LI A K+G F +AE++ + M +G P+ +++ ++++ + + R AE +F
Sbjct: 319 VTFSVLINALVKEGKFFEAEELYNEMLPRGIIPNTITYNSMIDGFSKQNRLDAAERMFYL 378
Query: 157 MQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDE-EKSPLKPDQKMFHMMIYMYK 215
M + G P +T+ I++ + A + + M LL E + L + + +I+ +
Sbjct: 379 MATKGCSPDVITFSILIDGYCGAKRVDDG----MKLLHEMSRRGLVANTITYTTLIHGFC 434
Query: 216 KAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETN---YKEVSKIYDQMQRAGL----- 267
+ G A L M GV + VT N+L+ N K+ +++ MQ++ +
Sbjct: 435 QLGNLNAALDLLQEMISSGVCPNVVTCNTLLDGLCNNGKLKDALEMFKVMQKSKMDLDAS 494
Query: 268 ------QPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGM 321
+PDV +Y +LI + EA ++EEM G+ P YN ++D
Sbjct: 495 HPFNDVEPDVQTYNILICGLINEGKFSEAEELYEEMPHRGLVPDTITYNSVIDGLCKQSR 554
Query: 322 VDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGT 381
+D+A +F M SPD+ ++TT+++ Y + + F + + G V N ITY T
Sbjct: 555 LDEATQMFDSMGSKGFSPDVVTFTTLINGYCKVGRVGDGLEVFCEMGRRGIVANAITYRT 614
Query: 382 LIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAV 431
LI G+ +V N+ ++I+ +M +G+ P+ ++ ++ AV
Sbjct: 615 LIHGFCQVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRAV 664
Score = 92.0 bits (227), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 61/280 (21%), Positives = 121/280 (43%), Gaps = 8/280 (2%)
Query: 214 YKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKE---VSKIYDQMQRAGLQPD 270
+ + G + A LF M + + L+ + V ++ +M+ + +
Sbjct: 51 FHEIKGLDDAIDLFGYMVRSRPLPCVIDFCKLLGVVVRMERPDVVISLHRKMEMRRIPCN 110
Query: 271 VVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFK 330
+ S+ +LI + + AL+ F ++ G P+ ++ LL + V +A F
Sbjct: 111 IYSFTILIKCFCSCSKLPFALSTFGKITKLGFHPSLVTFSTLLHGLCVEDRVSEALHFF- 169
Query: 331 CMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVN 390
C P++ ++TT+++ + A R+ +DG PN ITYGT++ G K+
Sbjct: 170 ---HQICKPNVIAFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKMG 226
Query: 391 NLEKMMEIYDKM-RVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAK 449
+ + + KM V+ IKPN I++ I+D K+ A + EM+ G P+
Sbjct: 227 DTVSALNLLRKMEEVSRIKPNVVIYSAIIDGLWKDGRQTDAQNLFSEMQEKGISPNLFTY 286
Query: 450 NILLSLAKTADERNEANELLGNFNHPNNEPGINGLSISVD 489
N +++ ++ +EA LL P + S+ ++
Sbjct: 287 NCMINGFCSSGRWSEAQRLLREMFERKMSPDVVTFSVLIN 326
>gi|225447872|ref|XP_002269015.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
mitochondrial-like [Vitis vinifera]
Length = 656
Score = 162 bits (410), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 106/412 (25%), Positives = 195/412 (47%), Gaps = 14/412 (3%)
Query: 63 VLGTLVRLKQLK-KWNVVSEVLEWLRIQSW-WDFNEMDFLMLITAYGKQGDFNKAEKVLS 120
+L ++L +++ W + +E+ LRI S + FN +++ K+G KA + +
Sbjct: 220 MLSLFLKLNRMEMAWVLYAEMFR-LRISSTVYTFN-----IMVNVLCKEGKLKKAREFIG 273
Query: 121 FMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEAN 180
FM G+ P+VVS+ ++ Y G + A I M+ G P + TY ++ +
Sbjct: 274 FMEGLGFKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEG 333
Query: 181 KFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTV 240
+ +EA +F +++ L P+ ++ +I Y G E+A M ++G+ S
Sbjct: 334 RLEEASGLFDKMVE---IGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVS 390
Query: 241 TYNSLMS---FETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEM 297
TYN L+ E E + +M++ G+ PD ++Y +LIN Y + ++A + EM
Sbjct: 391 TYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCGNAKKAFDLHNEM 450
Query: 298 LDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDM 357
L G+ PTH Y L+ + + +A +F+ + SPD+ + M+ + ++
Sbjct: 451 LSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMVDGHCANGNV 510
Query: 358 EGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTI 417
E A + + + P+ +T+ TL++G + +E+ + D+M+ GIKP+ + T+
Sbjct: 511 ERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMKRRGIKPDHISYNTL 570
Query: 418 MDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELL 469
+ YG+ D A EM S GF P N L+ E + A ELL
Sbjct: 571 ISGYGRRGDIKDAFRVRDEMLSIGFNPTLLTYNALIKCLCKNQEGDLAEELL 622
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 90/359 (25%), Positives = 176/359 (49%), Gaps = 8/359 (2%)
Query: 98 DFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRM 157
D L+ + ++ D +A K M +KG P + + ++ + + R + A ++ M
Sbjct: 183 DLLVRVCCELRRAD--EAFKCFYMMKEKGIVPKIETCNDMLSLFLKLNRMEMAWVLYAEM 240
Query: 158 QSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKA 217
+ T+ I++ + + K K+A E F+ + E KP+ ++ +I+ Y
Sbjct: 241 FRLRISSTVYTFNIMVNVLCKEGKLKKARE-FIGFM--EGLGFKPNVVSYNTIIHGYSSR 297
Query: 218 GGYEKARKLFALMAERGVQQSTVTYNSLMSF---ETNYKEVSKIYDQMQRAGLQPDVVSY 274
G E AR++ M +G++ + TY SL+S E +E S ++D+M GL P+ V+Y
Sbjct: 298 GNIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTY 357
Query: 275 ALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRR 334
LI+ Y E A + +EM+ G+ P+ YN+L+ A + G + +A + K MR+
Sbjct: 358 NTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRK 417
Query: 335 DRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEK 394
PD +Y +++ Y + + A + G P +TY +LI ++ N +++
Sbjct: 418 KGIIPDAITYNILINGYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKE 477
Query: 395 MMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILL 453
++++K+ G+ P+ +F ++D + N + + A + KEM+ PPD+ N L+
Sbjct: 478 ADDLFEKILDQGVSPDVIMFNAMVDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLM 536
>gi|15218325|ref|NP_172461.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|122215618|sp|Q3EDF8.1|PPR28_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g09900
gi|332190391|gb|AEE28512.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 598
Score = 162 bits (410), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 106/393 (26%), Positives = 175/393 (44%), Gaps = 39/393 (9%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
LI + + G KA K+L + G P V+++ ++ Y + G NA ++ RM S
Sbjct: 143 LIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRMSVS- 201
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVF-------------------------------M 190
P +TY IL+ ++ K K+A EV M
Sbjct: 202 --PDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAM 259
Query: 191 TLLDEEK-SPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSL---M 246
LLDE + PD +++++ K G ++A K M G Q + +T+N + M
Sbjct: 260 KLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSM 319
Query: 247 SFETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTH 306
+ + K+ M R G P VV++ +LIN + A+ + E+M G +P
Sbjct: 320 CSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNS 379
Query: 307 KAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRR 366
+YN LL F +D+A + M C PDI +Y TML+A +E A + +
Sbjct: 380 LSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQ 439
Query: 367 LKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKD 426
L G P +ITY T+I G AK K +++ D+MR +KP+ +++++ +
Sbjct: 440 LSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGK 499
Query: 427 FDSAVVWYKEMESCGFPPDQKAKN-ILLSLAKT 458
D A+ ++ E E G P+ N I+L L K+
Sbjct: 500 VDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKS 532
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 92/364 (25%), Positives = 169/364 (46%), Gaps = 6/364 (1%)
Query: 109 QGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALT 168
G +A +VL M ++ P V+++T L+EA R +A + M+ G P +T
Sbjct: 217 SGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVT 276
Query: 169 YQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFA 228
Y +++ + + EA + L D S +P+ ++++ G + A KL A
Sbjct: 277 YNVLVNGICKEGRLDEAIKF---LNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLA 333
Query: 229 LMAERGVQQSTVTYNSLMSFETNYKEVSK---IYDQMQRAGLQPDVVSYALLINAYGKAR 285
M +G S VT+N L++F + + I ++M + G QP+ +SY L++ + K +
Sbjct: 334 DMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEK 393
Query: 286 REEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYT 345
+ + A+ E M+ G P YN +L A G V+ A + + CSP + +Y
Sbjct: 394 KMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYN 453
Query: 346 TMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVN 405
T++ A A K ++ P+ ITY +L+ G ++ +++ ++ + +
Sbjct: 454 TVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERM 513
Query: 406 GIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEA 465
GI+PN F +IM K++ D A+ + M + G P++ + IL+ EA
Sbjct: 514 GIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAKEA 573
Query: 466 NELL 469
ELL
Sbjct: 574 LELL 577
Score = 126 bits (316), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 94/384 (24%), Positives = 164/384 (42%), Gaps = 17/384 (4%)
Query: 107 GKQGDFNKAEKVLSFMNKKGYAPSVVSHTAL--------MEAYGRGGRYKNAEAIFRRMQ 158
G+ F S N G+ SV S AL + R G + M
Sbjct: 70 GRAQKFETLSSGYSNSNGNGHYSSVNSSFALEDVESNNHLRQMVRTGELEEGFKFLENMV 129
Query: 159 SSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAG 218
G P + +++ F K ++A ++ L E S PD +++MI Y KAG
Sbjct: 130 YHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEIL---EGSGAVPDVITYNVMISGYCKAG 186
Query: 219 GYEKARKLFALMAERGVQQSTVTYNSLMSFETN---YKEVSKIYDQMQRAGLQPDVVSYA 275
A + M+ V VTYN+++ + K+ ++ D+M + PDV++Y
Sbjct: 187 EINNALSVLDRMS---VSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYT 243
Query: 276 LLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRD 335
+LI A + A+ + +EM D G P YN+L++ G +D+A M
Sbjct: 244 ILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSS 303
Query: 336 RCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKM 395
C P++ ++ +L + + AEK + + GF P+V+T+ LI + L +
Sbjct: 304 GCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRA 363
Query: 396 MEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSL 455
++I +KM +G +PN + ++ + K K D A+ + + M S G PD N +L+
Sbjct: 364 IDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTA 423
Query: 456 AKTADERNEANELLGNFNHPNNEP 479
+ +A E+L + P
Sbjct: 424 LCKDGKVEDAVEILNQLSSKGCSP 447
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 88/406 (21%), Positives = 177/406 (43%), Gaps = 45/406 (11%)
Query: 40 EVGSAVAVLRSERTRGQPLPKDLVLGTLVRLKQLKKWNVVSEVLEWLRIQSWWDFNEMDF 99
E+ +A++VL + + +L +L +LK+ EVL+ + + + + + +
Sbjct: 187 EINNALSVLDRMSVSPDVVTYNTILRSLCDSGKLKQ---AMEVLDRMLQRDCYP-DVITY 242
Query: 100 LMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQS 159
+LI A + A K+L M +G P VV++ L+ + GR A M S
Sbjct: 243 TILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPS 302
Query: 160 SGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGG 219
SG +P+ +T+ IIL+ ++ +AE++ +L + P F+++I + G
Sbjct: 303 SGCQPNVITHNIILRSMCSTGRWMDAEKLLADML---RKGFSPSVVTFNILINFLCRKGL 359
Query: 220 YEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSKIYDQMQRA---GLQPDVVSYAL 276
+A + M + G Q ++++YN L+ K++ + + ++R G PD+V+Y
Sbjct: 360 LGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNT 419
Query: 277 LINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDR 336
++ A K + E+A+ + ++ G P YN ++D A +G +A + MR
Sbjct: 420 MLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKD 479
Query: 337 CSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVIT------------------ 378
PD +Y++++ ++ A KFF ++ G PN +T
Sbjct: 480 LKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAI 539
Query: 379 -----------------YGTLIKGYAKVNNLEKMMEIYDKMRVNGI 407
Y LI+G A ++ +E+ +++ G+
Sbjct: 540 DFLVFMINRGCKPNETSYTILIEGLAYEGMAKEALELLNELCNKGL 585
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 54/233 (23%), Positives = 108/233 (46%), Gaps = 3/233 (1%)
Query: 257 KIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAF 316
K + M G PD++ LI + + + +A + E + +G P YN+++ +
Sbjct: 123 KFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNVMISGY 182
Query: 317 AISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNV 376
+G ++ A +V R SPD+ +Y T+L + ++ ++ A + R+ Q P+V
Sbjct: 183 CKAGEINNALSVLD---RMSVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDV 239
Query: 377 ITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKE 436
ITY LI+ + + + M++ D+MR G P+ + +++ K D A+ + +
Sbjct: 240 ITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLND 299
Query: 437 MESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGINGLSISVD 489
M S G P+ NI+L + +A +LL + P + +I ++
Sbjct: 300 MPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILIN 352
>gi|224123318|ref|XP_002319049.1| predicted protein [Populus trichocarpa]
gi|222857425|gb|EEE94972.1| predicted protein [Populus trichocarpa]
Length = 585
Score = 162 bits (410), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 108/397 (27%), Positives = 172/397 (43%), Gaps = 41/397 (10%)
Query: 97 MDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRR 156
+ + +I K G A ++L M +KG P VV++ ++++ + R A F
Sbjct: 177 ITYTTIIKGLCKIGHTTNALQLLKKMEEKGCKPDVVAYNTVIDSLCKDRRANEAMYFFSE 236
Query: 157 MQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKK 216
M G P+ +TY IL F + EA +F ++ + P+ F +++ K
Sbjct: 237 MVDQGIPPNVVTYSSILHGFCNLGQLNEATSLFKQMIGRN---VMPNTVTFTILVDGLCK 293
Query: 217 AGGYEKARKLFALMAERGVQQSTVTYNSLM---SFETNYKEVSKIYDQMQRAGLQPDVVS 273
G +AR++F +M E GV+ TY++LM ++ E K++D M G P V
Sbjct: 294 EGMILEARRVFEMMTENGVEPDAYTYSALMDGYCLQSQMDEAQKLFDIMVGKGFAPSVRV 353
Query: 274 YALLINAYGKARREEEALAV-----------------------------------FEEML 298
Y +LIN + K+RR EA + F+EM
Sbjct: 354 YNILINGHCKSRRLNEAKTLLSEMYDRDLTPDTVTYSTLMQGFCQAGRPQVAQKLFKEMC 413
Query: 299 DAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDME 358
G+ P Y+ILLD G +D+A + K M+ + P IC Y ++ N +E
Sbjct: 414 SYGLLPDSITYSILLDGLCKHGHLDEAFRLLKAMQESKIEPHICIYNILIQGMCNFGKLE 473
Query: 359 GAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIM 418
A + F L G P+V+TY +I G K + E++ KM VNG PN + +
Sbjct: 474 AARELFSNLFVKGIQPSVVTYTVMISGLLKEGLSNEACEMFRKMVVNGCLPNSCTYNVAI 533
Query: 419 DAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSL 455
+ +N D +AV +EM GF D +LL L
Sbjct: 534 QGFLRNGDPSNAVRLIEEMVGRGFSADSSTFQMLLDL 570
Score = 142 bits (359), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 85/378 (22%), Positives = 179/378 (47%), Gaps = 6/378 (1%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
+ F L+ + A K+ + K G+APS++++T +++ + G NA +
Sbjct: 140 THVTFGTLLNGLCSKAKIIDAVKLFDEIGKMGFAPSLITYTTIIKGLCKIGHTTNALQLL 199
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
++M+ G +P + Y ++ + + EA F ++D+ + P+ + +++ +
Sbjct: 200 KKMEEKGCKPDVVAYNTVIDSLCKDRRANEAMYFFSEMVDQG---IPPNVVTYSSILHGF 256
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSL---MSFETNYKEVSKIYDQMQRAGLQPDV 271
G +A LF M R V +TVT+ L + E E ++++ M G++PD
Sbjct: 257 CNLGQLNEATSLFKQMIGRNVMPNTVTFTILVDGLCKEGMILEARRVFEMMTENGVEPDA 316
Query: 272 VSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKC 331
+Y+ L++ Y + +EA +F+ M+ G P+ + YNIL++ S +++A+T+
Sbjct: 317 YTYSALMDGYCLQSQMDEAQKLFDIMVGKGFAPSVRVYNILINGHCKSRRLNEAKTLLSE 376
Query: 332 MRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNN 391
M +PD +Y+T++ + A + A+K F+ + G +P+ ITY L+ G K +
Sbjct: 377 MYDRDLTPDTVTYSTLMQGFCQAGRPQVAQKLFKEMCSYGLLPDSITYSILLDGLCKHGH 436
Query: 392 LEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNI 451
L++ + M+ + I+P+ I+ ++ ++A + + G P +
Sbjct: 437 LDEAFRLLKAMQESKIEPHICIYNILIQGMCNFGKLEAARELFSNLFVKGIQPSVVTYTV 496
Query: 452 LLSLAKTADERNEANELL 469
++S NEA E+
Sbjct: 497 MISGLLKEGLSNEACEMF 514
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 101/461 (21%), Positives = 199/461 (43%), Gaps = 13/461 (2%)
Query: 36 NQIEEVGSAVAVLRSERTRGQPLPKDLV----LGTLVRLKQLKKWNVVSEVLEWLRIQSW 91
N + V AVA ++ +PLP +V LG+LV+ K + + ++ I+
Sbjct: 45 NNLHSVADAVASF-NQLLGIRPLPPVVVFNKLLGSLVKKKHYSTVISLCKQMDLSNIRP- 102
Query: 92 WDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAE 151
+ + L+ + + + A L M K G P+ V+ L+ + +A
Sbjct: 103 -NVYTLTILINCLCHSNRDHVHFAFSALGKMFKLGLQPTHVTFGTLLNGLCSKAKIIDAV 161
Query: 152 AIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMI 211
+F + G PS +TY I+K + A ++ + EEK KPD ++ +I
Sbjct: 162 KLFDEIGKMGFAPSLITYTTIIKGLCKIGHTTNALQLLKKM--EEKG-CKPDVVAYNTVI 218
Query: 212 YMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNY---KEVSKIYDQMQRAGLQ 268
K +A F+ M ++G+ + VTY+S++ N E + ++ QM +
Sbjct: 219 DSLCKDRRANEAMYFFSEMVDQGIPPNVVTYSSILHGFCNLGQLNEATSLFKQMIGRNVM 278
Query: 269 PDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTV 328
P+ V++ +L++ K EA VFE M + GV P Y+ L+D + + +D+A+ +
Sbjct: 279 PNTVTFTILVDGLCKEGMILEARRVFEMMTENGVEPDAYTYSALMDGYCLQSQMDEAQKL 338
Query: 329 FKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAK 388
F M +P + Y +++ + + + A+ + P+ +TY TL++G+ +
Sbjct: 339 FDIMVGKGFAPSVRVYNILINGHCKSRRLNEAKTLLSEMYDRDLTPDTVTYSTLMQGFCQ 398
Query: 389 VNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKA 448
+ +++ +M G+ P+ ++ ++D K+ D A K M+ P
Sbjct: 399 AGRPQVAQKLFKEMCSYGLLPDSITYSILLDGLCKHGHLDEAFRLLKAMQESKIEPHICI 458
Query: 449 KNILLSLAKTADERNEANELLGNFNHPNNEPGINGLSISVD 489
NIL+ + A EL N +P + ++ +
Sbjct: 459 YNILIQGMCNFGKLEAARELFSNLFVKGIQPSVVTYTVMIS 499
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 81/378 (21%), Positives = 162/378 (42%), Gaps = 25/378 (6%)
Query: 110 GDFNKAEKVLSFMNKK---------GYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSS 160
G F K L F+++ +PS +++ Y +A A F ++
Sbjct: 4 GTFPKFRSFLFFIHQHFTTSTASTTNISPSSITNGGFCSNYNNLHSVADAVASFNQLLGI 63
Query: 161 GPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAG-- 218
P P + + +L V K K V + S ++P+ ++I +
Sbjct: 64 RPLPPVVVFNKLLGSLV---KKKHYSTVISLCKQMDLSNIRPNVYTLTILINCLCHSNRD 120
Query: 219 ----GYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEV---SKIYDQMQRAGLQPDV 271
+ K+F L G+Q + VT+ +L++ + ++ K++D++ + G P +
Sbjct: 121 HVHFAFSALGKMFKL----GLQPTHVTFGTLLNGLCSKAKIIDAVKLFDEIGKMGFAPSL 176
Query: 272 VSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKC 331
++Y +I K AL + ++M + G +P AYN ++D+ ++A F
Sbjct: 177 ITYTTIIKGLCKIGHTTNALQLLKKMEEKGCKPDVVAYNTVIDSLCKDRRANEAMYFFSE 236
Query: 332 MRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNN 391
M P++ +Y+++L + N + A F+++ +PN +T+ L+ G K
Sbjct: 237 MVDQGIPPNVVTYSSILHGFCNLGQLNEATSLFKQMIGRNVMPNTVTFTILVDGLCKEGM 296
Query: 392 LEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNI 451
+ + +++ M NG++P+ ++ +MD Y D A + M GF P + NI
Sbjct: 297 ILEARRVFEMMTENGVEPDAYTYSALMDGYCLQSQMDEAQKLFDIMVGKGFAPSVRVYNI 356
Query: 452 LLSLAKTADERNEANELL 469
L++ + NEA LL
Sbjct: 357 LINGHCKSRRLNEAKTLL 374
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/163 (20%), Positives = 76/163 (46%), Gaps = 3/163 (1%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
+ + + +L+ K G ++A ++L M + P + + L++ G+ + A +F
Sbjct: 420 DSITYSILLDGLCKHGHLDEAFRLLKAMQESKIEPHICIYNILIQGMCNFGKLEAARELF 479
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
+ G +PS +TY +++ ++ EA E+F ++ + P+ +++ I +
Sbjct: 480 SNLFVKGIQPSVVTYTVMISGLLKEGLSNEACEMFRKMV---VNGCLPNSCTYNVAIQGF 536
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSK 257
+ G A +L M RG + T+ L+ E+N + +S+
Sbjct: 537 LRNGDPSNAVRLIEEMVGRGFSADSSTFQMLLDLESNDEIISR 579
>gi|22128712|gb|AAM92824.1| putative chloroplast RNA processing protein [Oryza sativa Japonica
Group]
Length = 878
Score = 162 bits (410), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 103/380 (27%), Positives = 182/380 (47%), Gaps = 12/380 (3%)
Query: 111 DFNKAEKVLSFMN------KKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRP 164
D N++++ L ++ G P VVS+ ++ + + G A + + M G P
Sbjct: 175 DENRSQEALELLHMMADDRGGGSPPDVVSYNTVLNGFFKEGDSDKAYSTYHEMLDRGILP 234
Query: 165 SALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKAR 224
+TY I+ +A +A EV T++ K+ + PD ++ +++ Y +G ++A
Sbjct: 235 DVVTYSSIIAALCKAQAMDKAMEVLNTMV---KNGVMPDCMTYNSILHGYCSSGQPKEAI 291
Query: 225 KLFALMAERGVQQSTVTYNSLMSFETN---YKEVSKIYDQMQRAGLQPDVVSYALLINAY 281
M GV+ + VTY+SLM++ E KI+D M + GL+PD+ +Y L+ Y
Sbjct: 292 GTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGY 351
Query: 282 GKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDI 341
E A+ + M+ G++P H +NIL+ A+A VDQA VF MR+ +P++
Sbjct: 352 ATKGALVEMHALLDLMVRNGIQPDHHVFNILICAYAKQEKVDQAMLVFSKMRQHGLNPNV 411
Query: 342 CSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDK 401
Y T++ + ++ A +F ++ +G PN+I Y +LI G + +K E+ +
Sbjct: 412 VCYGTVIDVLCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHGLCTCDKWDKAEELILE 471
Query: 402 MRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADE 461
M GI N F +I+D++ K + + M G PD N L+ A +
Sbjct: 472 MLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGK 531
Query: 462 RNEANELLGNFNHPNNEPGI 481
+EA +LL + +P I
Sbjct: 532 MDEATKLLASMVSVGVKPDI 551
Score = 154 bits (390), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 92/375 (24%), Positives = 181/375 (48%), Gaps = 4/375 (1%)
Query: 99 FLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNA-EAIFRRM 157
+ +LI + G + L + KKG+ ++ T L++ R +A + + RRM
Sbjct: 95 YAILIGCCCRAGRLDLGFAALGNVVKKGFRVDAITFTPLLKGLCADKRTSDAMDIVLRRM 154
Query: 158 QSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKA 217
G P +Y +LK + N+ +EA E+ + D+ PD ++ ++ + K
Sbjct: 155 TELGCIPDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNTVLNGFFKE 214
Query: 218 GGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSK---IYDQMQRAGLQPDVVSY 274
G +KA + M +RG+ VTY+S+++ + + K + + M + G+ PD ++Y
Sbjct: 215 GDSDKAYSTYHEMLDRGILPDVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTY 274
Query: 275 ALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRR 334
+++ Y + + +EA+ ++M GV P Y+ L++ +G +AR +F M +
Sbjct: 275 NSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTK 334
Query: 335 DRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEK 394
PDI +Y T+L Y + + ++G P+ + LI YAK +++
Sbjct: 335 RGLEPDIATYRTLLQGYATKGALVEMHALLDLMVRNGIQPDHHVFNILICAYAKQEKVDQ 394
Query: 395 MMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLS 454
M ++ KMR +G+ PN + T++D K+ D A++++++M G P+ L+
Sbjct: 395 AMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIH 454
Query: 455 LAKTADERNEANELL 469
T D+ ++A EL+
Sbjct: 455 GLCTCDKWDKAEELI 469
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 93/390 (23%), Positives = 174/390 (44%), Gaps = 41/390 (10%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
+I A K +KA +VL+ M K G P +++ +++ Y G+ K A ++M+S G
Sbjct: 242 IIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDG 301
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
P+ +TY ++ + + EA ++F ++ K L+PD + ++ Y G
Sbjct: 302 VEPNVVTYSSLMNYLCKNGRSTEARKIFDSM---TKRGLEPDIATYRTLLQGYATKGALV 358
Query: 222 KARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSK---IYDQMQRAGLQPDVVSYALLI 278
+ L LM G+Q +N L+ ++V + ++ +M++ GL P+VV Y +I
Sbjct: 359 EMHALLDLMVRNGIQPDHHVFNILICAYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGTVI 418
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAY----------------------------- 309
+ K+ ++A+ FE+M+D G+ P Y
Sbjct: 419 DVLCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHGLCTCDKWDKAEELILEMLDRGIC 478
Query: 310 ------NILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKF 363
N ++D+ G V ++ +F M R PDI +Y T++ A M+ A K
Sbjct: 479 LNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKL 538
Query: 364 FRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGK 423
+ G P+++TYGTLI GY +V+ ++ + ++ +M +G+ PN + I+
Sbjct: 539 LASMVSVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFH 598
Query: 424 NKDFDSAVVWYKEMESCGFPPDQKAKNILL 453
+ +A Y + G + NI+L
Sbjct: 599 TRRTAAAKELYVSITKSGTQLELSTYNIIL 628
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 95/393 (24%), Positives = 176/393 (44%), Gaps = 41/393 (10%)
Query: 99 FLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQ 158
F +LI AY KQ ++A V S M + G P+VV + +++ + G +A F +M
Sbjct: 379 FNILICAYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQMI 438
Query: 159 SSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAG 218
G P+ + Y ++ +K+ +AEE+ + +LD + + F+ +I + K G
Sbjct: 439 DEGLTPNIIVYTSLIHGLCTCDKWDKAEELILEMLDRG---ICLNTIFFNSIIDSHCKEG 495
Query: 219 GYEKARKLFALMAERGVQQSTVTYNSLM---SFETNYKEVSKIYDQMQRAGLQPDVVSYA 275
++ KLF LM GV+ +TYN+L+ E +K+ M G++PD+V+Y
Sbjct: 496 RVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYG 555
Query: 276 LLINAYGKARREEEALAVFEEMLDAGVRPT------------H----------------- 306
LIN Y + R ++ALA+F+EM+ +GV P H
Sbjct: 556 TLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVSITKS 615
Query: 307 ------KAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGA 360
YNI+L + + D+A +F+ + + ++ M+ A + M+ A
Sbjct: 616 GTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKCGRMDEA 675
Query: 361 EKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDA 420
+ F +G VP+V TY + + + +LE++ +++ M NG + + +I+
Sbjct: 676 KDLFAAHSANGLVPDVRTYSLMAENLIEQGSLEELDDLFLSMEENGCSADSRMLNSIVRK 735
Query: 421 YGKNKDFDSAVVWYKEMESCGFPPDQKAKNILL 453
+ D A + ++ F + + LL
Sbjct: 736 LLQRGDITRAGTYLFMIDEKHFSLEASTASFLL 768
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 96/444 (21%), Positives = 184/444 (41%), Gaps = 41/444 (9%)
Query: 97 MDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRR 156
M + ++ Y G +A L M G P+VV++++LM + GR A IF
Sbjct: 272 MTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDS 331
Query: 157 MQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKK 216
M G P TY+ +L+ + E + ++ ++ ++PD +F+++I Y K
Sbjct: 332 MTKRGLEPDIATYRTLLQGYATKGALVEMHALLDLMV---RNGIQPDHHVFNILICAYAK 388
Query: 217 AGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSKI---YDQMQRAGLQPDVVS 273
++A +F+ M + G+ + V Y +++ V ++QM GL P+++
Sbjct: 389 QEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQMIDEGLTPNIIV 448
Query: 274 YALLIN-----------------------------------AYGKARREEEALAVFEEML 298
Y LI+ ++ K R E+ +F+ M+
Sbjct: 449 YTSLIHGLCTCDKWDKAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMV 508
Query: 299 DAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDME 358
GV+P YN L+D ++G +D+A + M PDI +Y T+++ Y S M+
Sbjct: 509 RIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLINGYCRVSRMD 568
Query: 359 GAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIM 418
A F+ + G PN+ITY +++G E+Y + +G + + + I+
Sbjct: 569 DALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVSITKSGTQLELSTYNIIL 628
Query: 419 DAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNE 478
KN D A+ ++ + + + NI++ +EA +L +
Sbjct: 629 HGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKCGRMDEAKDLFAAHSANGLV 688
Query: 479 PGINGLSISVDEEDDDDDDDEDDD 502
P + S+ + + +E DD
Sbjct: 689 PDVRTYSLMAENLIEQGSLEELDD 712
>gi|449529622|ref|XP_004171797.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
mitochondrial-like [Cucumis sativus]
Length = 618
Score = 162 bits (410), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 123/472 (26%), Positives = 218/472 (46%), Gaps = 17/472 (3%)
Query: 35 MNQIEEVGSAVAVLRSERTRGQPLPKDLVLGTLVRLKQLKKWNVVSEVLE-WLRIQSW-W 92
+ + V A+A + RG +P + TL+ K L + +SE +LR+Q
Sbjct: 136 LCNVNRVSEALAAMAGILRRGY-IPNVVTYTTLI--KGLCMEHRISEATRLFLRMQKLGC 192
Query: 93 DFNEMDFLMLITAYGKQGDFNKAEKV----LSFMNKKGY--APSVVSHTALMEAYGRGGR 146
N + + LI + G+ N A K+ L+ ++ G P V++++ +++ + GR
Sbjct: 193 TPNAVTYGTLIKGLCQTGNVNIALKLHKEMLNDASQYGVNCKPGVITYSIIIDGLCKVGR 252
Query: 147 YKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKM 206
A+ +F M++ G P ++Y ++ F A K+ +++ +F ++D+ ++PD
Sbjct: 253 EDEAKELFEEMKAQGMIPDVISYSTLIHGFCCAGKWDQSKHLFDEMVDQG---VQPDMVT 309
Query: 207 FHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLM---SFETNYKEVSKIYDQMQ 263
F ++I K G +A+KL +M +RG+ + +TYNSL+ + +++ M
Sbjct: 310 FSVLIDTLCKEGKVTEAKKLLEVMIQRGIVPNLITYNSLIDGFCMVGDLNSARELFLSMP 369
Query: 264 RAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVD 323
GL+PD +SY LIN Y K + +EA+ ++ EML G P Y LL G V
Sbjct: 370 SKGLEPDEISYTTLINGYCKTWKVKEAMNLYNEMLQVGKSPNVTTYGTLLKGLFQKGKVG 429
Query: 324 QARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLI 383
A+ +F M+ S + Y L + A + F LK F N+ Y LI
Sbjct: 430 DAKKLFGVMKTYGVSANSQIYGIFLDGLCKNDCLFEAMELFNELKSYNFKLNIENYSCLI 489
Query: 384 KGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFP 443
G K LE E+++K+ G++P+ + ++ + K D+A + +++ME G
Sbjct: 490 DGLCKAGKLETAWELFEKLSQEGLQPDVVTYNIMIHGFCKVGQVDNANILFEKMEENGCT 549
Query: 444 PDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGINGLSISVDEEDDDD 495
PD A N LL ++ E +LL + P +I VD D+
Sbjct: 550 PDIIAYNTLLCGFCEGNKLEEVIKLLHKMVQKDVSPNAASCTIVVDMLCKDE 601
Score = 134 bits (338), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 106/449 (23%), Positives = 193/449 (42%), Gaps = 55/449 (12%)
Query: 54 RGQPLPKDLVLGTLVRLKQLKKWNVVSEVLEWLRIQSWWDFNEM-------DFLMLITAY 106
R P+P L L L K N S++ +NEM D L
Sbjct: 84 RSHPIPPISSFNRL--LGGLAKINHYSQLFSL--------YNEMRLAGLSPDLFTLSILA 133
Query: 107 GKQGDFNKAEKVLSFMN---KKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPR 163
+ N+ + L+ M ++GY P+VV++T L++ R A +F RMQ G
Sbjct: 134 NCLCNVNRVSEALAAMAGILRRGYIPNVVTYTTLIKGLCMEHRISEATRLFLRMQKLGCT 193
Query: 164 PSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKS---PLKPDQKMFHMMIYMYKKAGGY 220
P+A+TY ++K + A ++ +L++ KP + ++I K G
Sbjct: 194 PNAVTYGTLIKGLCQTGNVNIALKLHKEMLNDASQYGVNCKPGVITYSIIIDGLCKVGRE 253
Query: 221 EKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSKIYDQMQRAGLQPDVVSYALLINA 280
++A++LF ++M+ G+ PDV+SY+ LI+
Sbjct: 254 DEAKELF--------------------------------EEMKAQGMIPDVISYSTLIHG 281
Query: 281 YGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPD 340
+ A + +++ +F+EM+D GV+P +++L+D G V +A+ + + M + P+
Sbjct: 282 FCCAGKWDQSKHLFDEMVDQGVQPDMVTFSVLIDTLCKEGKVTEAKKLLEVMIQRGIVPN 341
Query: 341 ICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYD 400
+ +Y +++ + D+ A + F + G P+ I+Y TLI GY K +++ M +Y+
Sbjct: 342 LITYNSLIDGFCMVGDLNSARELFLSMPSKGLEPDEISYTTLINGYCKTWKVKEAMNLYN 401
Query: 401 KMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTAD 460
+M G PN T + T++ + A + M++ G + + I L D
Sbjct: 402 EMLQVGKSPNVTTYGTLLKGLFQKGKVGDAKKLFGVMKTYGVSANSQIYGIFLDGLCKND 461
Query: 461 ERNEANELLGNFNHPNNEPGINGLSISVD 489
EA EL N + I S +D
Sbjct: 462 CLFEAMELFNELKSYNFKLNIENYSCLID 490
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 75/311 (24%), Positives = 152/311 (48%), Gaps = 6/311 (1%)
Query: 97 MDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRR 156
+ F +LI K+G +A+K+L M ++G P+++++ +L++ + G +A +F
Sbjct: 308 VTFSVLIDTLCKEGKVTEAKKLLEVMIQRGIVPNLITYNSLIDGFCMVGDLNSARELFLS 367
Query: 157 MQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKK 216
M S G P ++Y ++ + + K KEA ++ +L KSP + + ++ +
Sbjct: 368 MPSKGLEPDEISYTTLINGYCKTWKVKEAMNLYNEMLQVGKSP---NVTTYGTLLKGLFQ 424
Query: 217 AGGYEKARKLFALMAERGVQQSTVTYNSLMSFETN---YKEVSKIYDQMQRAGLQPDVVS 273
G A+KLF +M GV ++ Y + E +++++++ + ++ +
Sbjct: 425 KGKVGDAKKLFGVMKTYGVSANSQIYGIFLDGLCKNDCLFEAMELFNELKSYNFKLNIEN 484
Query: 274 YALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMR 333
Y+ LI+ KA + E A +FE++ G++P YNI++ F G VD A +F+ M
Sbjct: 485 YSCLIDGLCKAGKLETAWELFEKLSQEGLQPDVVTYNIMIHGFCKVGQVDNANILFEKME 544
Query: 334 RDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLE 393
+ C+PDI +Y T+L + + +E K ++ Q PN + ++ K +
Sbjct: 545 ENGCTPDIIAYNTLLCGFCEGNKLEEVIKLLHKMVQKDVSPNAASCTIVVDMLCKDEKYK 604
Query: 394 KMMEIYDKMRV 404
K +++ K V
Sbjct: 605 KFVDLLPKFPV 615
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/238 (23%), Positives = 107/238 (44%), Gaps = 8/238 (3%)
Query: 259 YDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAI 318
+D M R+ P + S+ L+ K + +++ EM AG+ P +IL +
Sbjct: 79 FDLMMRSHPIPPISSFNRLLGGLAKINHYSQLFSLYNEMRLAGLSPDLFTLSILANCLCN 138
Query: 319 SGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVIT 378
V +A + R P++ +YTT++ + A + F R+++ G PN +T
Sbjct: 139 VNRVSEALAAMAGILRRGYIPNVVTYTTLIKGLCMEHRISEATRLFLRMQKLGCTPNAVT 198
Query: 379 YGTLIKGYAKVNNLEKMMEIYDKMR-------VNGIKPNQTIFTTIMDAYGKNKDFDSAV 431
YGTLIKG + N+ ++++ +M VN KP ++ I+D K D A
Sbjct: 199 YGTLIKGLCQTGNVNIALKLHKEMLNDASQYGVN-CKPGVITYSIIIDGLCKVGREDEAK 257
Query: 432 VWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGINGLSISVD 489
++EM++ G PD + + L+ A + +++ L +P + S+ +D
Sbjct: 258 ELFEEMKAQGMIPDVISYSTLIHGFCCAGKWDQSKHLFDEMVDQGVQPDMVTFSVLID 315
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/149 (24%), Positives = 72/149 (48%)
Query: 289 EALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTML 348
+A F+ M+ + P ++N LL A Q +++ MR SPD+ + + +
Sbjct: 74 QAFHFFDLMMRSHPIPPISSFNRLLGGLAKINHYSQLFSLYNEMRLAGLSPDLFTLSILA 133
Query: 349 SAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIK 408
+ N + + A + + G++PNV+TY TLIKG + + + ++ +M+ G
Sbjct: 134 NCLCNVNRVSEALAAMAGILRRGYIPNVVTYTTLIKGLCMEHRISEATRLFLRMQKLGCT 193
Query: 409 PNQTIFTTIMDAYGKNKDFDSAVVWYKEM 437
PN + T++ + + + A+ +KEM
Sbjct: 194 PNAVTYGTLIKGLCQTGNVNIALKLHKEM 222
>gi|125580966|gb|EAZ21897.1| hypothetical protein OsJ_05550 [Oryza sativa Japonica Group]
Length = 595
Score = 162 bits (410), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 117/437 (26%), Positives = 204/437 (46%), Gaps = 38/437 (8%)
Query: 61 DLVLGTLVRLKQLKKWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLS 120
D ++ V+ + KKW+++ V EW+ +S + + + + +LI +YGK+ NKAE +
Sbjct: 140 DDLVNVAVQFRMNKKWDLIIPVCEWILYRSSFRPDIICYNLLIESYGKKRQLNKAESIYM 199
Query: 121 FMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEAN 180
+ + P+ ++ L+ AY G AE + M+ G P+A Y L ++A
Sbjct: 200 ALLEAQCVPTEDTYALLLRAYCNAGSLHRAEGVISEMREHGIPPNATVYNAYLDGLLKAR 259
Query: 181 KFKEAEEVF-------------------------------MTLLDEEKS-PLKPDQKMFH 208
++A EV+ M + +E KS KP+ +
Sbjct: 260 CTEKAVEVYQRMKRERCRANTETFTLMINVYGKAKQPMSSMKVFNEMKSIGCKPNICTYT 319
Query: 209 MMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNY---KEVSKIYDQMQRA 265
++ + + G EKA ++F M + G + YN+LM + + S+I+ MQ
Sbjct: 320 ALVNAFAREGLCEKAEEVFEEMQQAGHEPDVYAYNALMEAYSRAGLPQGASEIFSLMQHM 379
Query: 266 GLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQA 325
G +PD SY +L++AYG+A E+A AVFEE+ G+ PT K++ +LL A A SG +
Sbjct: 380 GCEPDRASYNILVDAYGRAGLHEDAEAVFEELKQRGMSPTMKSHMLLLAAHARSGNATRC 439
Query: 326 RTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKG 385
V + + +PD + ML+AY A ++ E+ F +++ G +V TY +
Sbjct: 440 EEVMAQLHKSGLTPDTFALNAMLNAYARAGRLDDMERLFAAMERRGDA-DVGTYNVAVNA 498
Query: 386 YAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPD 445
Y + + +M + + G+ + +T M AY + K++ V +EM G PD
Sbjct: 499 YGRAGYVGRMEAAFAAVAARGLAADVVTWTARMGAYARRKEYGRCVGMVEEMVDAGCYPD 558
Query: 446 QKAKNILLSLAKTADER 462
+L LA +DER
Sbjct: 559 AGTARVL--LAACSDER 573
Score = 111 bits (278), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 64/228 (28%), Positives = 112/228 (49%)
Query: 262 MQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGM 321
+ R+ +PD++ Y LLI +YGK R+ +A +++ +L+A PT Y +LL A+ +G
Sbjct: 166 LYRSSFRPDIICYNLLIESYGKKRQLNKAESIYMALLEAQCVPTEDTYALLLRAYCNAGS 225
Query: 322 VDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGT 381
+ +A V MR P+ Y L + A E A + ++R+K++ N T+
Sbjct: 226 LHRAEGVISEMREHGIPPNATVYNAYLDGLLKARCTEKAVEVYQRMKRERCRANTETFTL 285
Query: 382 LIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCG 441
+I Y K M+++++M+ G KPN +T +++A+ + + A ++EM+ G
Sbjct: 286 MINVYGKAKQPMSSMKVFNEMKSIGCKPNICTYTALVNAFAREGLCEKAEEVFEEMQQAG 345
Query: 442 FPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGINGLSISVD 489
PD A N L+ A A+E+ H EP +I VD
Sbjct: 346 HEPDVYAYNALMEAYSRAGLPQGASEIFSLMQHMGCEPDRASYNILVD 393
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 69/278 (24%), Positives = 125/278 (44%), Gaps = 42/278 (15%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + L+ A+ ++G KAE+V M + G+ P V ++ ALMEAY R G + A IF
Sbjct: 314 NICTYTALVNAFAREGLCEKAEEVFEEMQQAGHEPDVYAYNALMEAYSRAGLPQGASEIF 373
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
MQ G P +Y I++ + A ++AE VF L ++ + P K +++ +
Sbjct: 374 SLMQHMGCEPDRASYNILVDAYGRAGLHEDAEAVFEEL---KQRGMSPTMKSHMLLLAAH 430
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETN---YKEVSKIYDQMQRAGLQPDV 271
++G + ++ A + + G+ T N++++ ++ +++ M+R G DV
Sbjct: 431 ARSGNATRCEEVMAQLHKSGLTPDTFALNAMLNAYARAGRLDDMERLFAAMERRG-DADV 489
Query: 272 VSYALLINAYGKA---------------------------------RREE--EALAVFEE 296
+Y + +NAYG+A RR+E + + EE
Sbjct: 490 GTYNVAVNAYGRAGYVGRMEAAFAAVAARGLAADVVTWTARMGAYARRKEYGRCVGMVEE 549
Query: 297 MLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRR 334
M+DAG P +LL A + V+Q + + M +
Sbjct: 550 MVDAGCYPDAGTARVLLAACSDERQVEQVTAIVRSMHK 587
>gi|356544498|ref|XP_003540687.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
mitochondrial-like [Glycine max]
Length = 623
Score = 162 bits (410), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 105/431 (24%), Positives = 196/431 (45%), Gaps = 12/431 (2%)
Query: 76 WNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHT 135
W + +E+ S + FN ++I K+G KA++ + M G P+VV++
Sbjct: 201 WVLYAEMFRMNIRSSLYTFN-----IMINVLCKEGKLKKAKEFIGHMETLGVKPNVVTYN 255
Query: 136 ALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDE 195
++ + G+++ A IF+ M+ G P TY + + + +EA + +L+
Sbjct: 256 TIIHGHCLRGKFQRARVIFQTMKDKGLEPDCYTYNSFISGLCKEGRLEEASGLICKMLE- 314
Query: 196 EKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMS---FETNY 252
L P+ ++ +I Y G +KA M +G+ S VTYN + E
Sbjct: 315 --GGLVPNAVTYNALIDGYCNKGDLDKAYAYRDEMISKGIMASLVTYNLFIHALFMEGRM 372
Query: 253 KEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNIL 312
+ + +M+ G+ PD V++ +LIN Y + + A + +EM+ G++PT Y L
Sbjct: 373 GDADNMIKEMREKGMMPDAVTHNILINGYCRCGDAKRAFGLLDEMVGKGIQPTLVTYTSL 432
Query: 313 LDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGF 372
+ + +A +F ++++ PDI + ++ + +++ A + + +
Sbjct: 433 IYVLGKRNRMKEADALFSKIQQEGLLPDIIVFNALIDGHCANGNIDRAFQLLKEMDNMKV 492
Query: 373 VPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVV 432
+P+ ITY TL++GY + +E+ ++ D+M+ GIKP+ + T++ Y K D A
Sbjct: 493 LPDEITYNTLMQGYCREGKVEEARQLLDEMKRRGIKPDHISYNTLISGYSKRGDMKDAFR 552
Query: 433 WYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGINGLSISVDEED 492
EM + GF P N L+ E A ELL P + +S+ E
Sbjct: 553 VRDEMMTTGFDPTILTYNALIQGLCKNQEGEHAEELLKEMVSKGITPD-DSTYLSIIEAM 611
Query: 493 DDDDDDEDDDD 503
+ DD E +DD
Sbjct: 612 ETVDDLEGNDD 622
Score = 145 bits (366), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 92/374 (24%), Positives = 181/374 (48%), Gaps = 6/374 (1%)
Query: 99 FLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQ 158
F +L+ AY + N+A + + +KG+ P++ + ++ + + R + A ++ M
Sbjct: 149 FDLLVRAYCELKKPNEALECFYLIKEKGFVPNIETCNQMLSLFLKLNRTQMAWVLYAEMF 208
Query: 159 SSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAG 218
R S T+ I++ + + K K+A+E + E +KP+ ++ +I+ + G
Sbjct: 209 RMNIRSSLYTFNIMINVLCKEGKLKKAKEFIGHM---ETLGVKPNVVTYNTIIHGHCLRG 265
Query: 219 GYEKARKLFALMAERGVQQSTVTYNSLMSF---ETNYKEVSKIYDQMQRAGLQPDVVSYA 275
+++AR +F M ++G++ TYNS +S E +E S + +M GL P+ V+Y
Sbjct: 266 KFQRARVIFQTMKDKGLEPDCYTYNSFISGLCKEGRLEEASGLICKMLEGGLVPNAVTYN 325
Query: 276 LLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRD 335
LI+ Y ++A A +EM+ G+ + YN+ + A + G + A + K MR
Sbjct: 326 ALIDGYCNKGDLDKAYAYRDEMISKGIMASLVTYNLFIHALFMEGRMGDADNMIKEMREK 385
Query: 336 RCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKM 395
PD ++ +++ Y D + A + G P ++TY +LI K N +++
Sbjct: 386 GMMPDAVTHNILINGYCRCGDAKRAFGLLDEMVGKGIQPTLVTYTSLIYVLGKRNRMKEA 445
Query: 396 MEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSL 455
++ K++ G+ P+ +F ++D + N + D A KEM++ PD+ N L+
Sbjct: 446 DALFSKIQQEGLLPDIIVFNALIDGHCANGNIDRAFQLLKEMDNMKVLPDEITYNTLMQG 505
Query: 456 AKTADERNEANELL 469
+ EA +LL
Sbjct: 506 YCREGKVEEARQLL 519
Score = 98.6 bits (244), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 70/327 (21%), Positives = 141/327 (43%), Gaps = 41/327 (12%)
Query: 165 SALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKAR 224
+ L + ++++ + E K EA E F L +EK P+ + + M+ ++ K + A
Sbjct: 145 TTLIFDLLVRAYCELKKPNEALECFY--LIKEKG-FVPNIETCNQMLSLFLKLNRTQMAW 201
Query: 225 KLFALMAERGVQQSTVTYNSLMSF---ETNYKEVSKIYDQMQRAGLQPDVVSYALLINAY 281
L+A M ++ S T+N +++ E K+ + M+ G++P+VV+Y +I+ +
Sbjct: 202 VLYAEMFRMNIRSSLYTFNIMINVLCKEGKLKKAKEFIGHMETLGVKPNVVTYNTIIHGH 261
Query: 282 GKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDI 341
+ + A +F+ M D G+ P YN + G +++A + M P+
Sbjct: 262 CLRGKFQRARVIFQTMKDKGLEPDCYTYNSFISGLCKEGRLEEASGLICKMLEGGLVPNA 321
Query: 342 CSYTTMLSAYVNASD-------------------------------MEG----AEKFFRR 366
+Y ++ Y N D MEG A+ +
Sbjct: 322 VTYNALIDGYCNKGDLDKAYAYRDEMISKGIMASLVTYNLFIHALFMEGRMGDADNMIKE 381
Query: 367 LKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKD 426
+++ G +P+ +T+ LI GY + + ++ + D+M GI+P +T+++ GK
Sbjct: 382 MREKGMMPDAVTHNILINGYCRCGDAKRAFGLLDEMVGKGIQPTLVTYTSLIYVLGKRNR 441
Query: 427 FDSAVVWYKEMESCGFPPDQKAKNILL 453
A + +++ G PD N L+
Sbjct: 442 MKEADALFSKIQQEGLLPDIIVFNALI 468
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 50/230 (21%), Positives = 100/230 (43%), Gaps = 3/230 (1%)
Query: 227 FALMAERGVQQSTVTYNSLMSFETNYK---EVSKIYDQMQRAGLQPDVVSYALLINAYGK 283
AL +R ++T+ ++ L+ K E + + ++ G P++ + +++ + K
Sbjct: 134 LALARDRVDAKTTLIFDLLVRAYCELKKPNEALECFYLIKEKGFVPNIETCNQMLSLFLK 193
Query: 284 ARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICS 343
R + A ++ EM +R + +NI+++ G + +A+ M P++ +
Sbjct: 194 LNRTQMAWVLYAEMFRMNIRSSLYTFNIMINVLCKEGKLKKAKEFIGHMETLGVKPNVVT 253
Query: 344 YTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMR 403
Y T++ + + A F+ +K G P+ TY + I G K LE+ + KM
Sbjct: 254 YNTIIHGHCLRGKFQRARVIFQTMKDKGLEPDCYTYNSFISGLCKEGRLEEASGLICKML 313
Query: 404 VNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILL 453
G+ PN + ++D Y D D A + EM S G N+ +
Sbjct: 314 EGGLVPNAVTYNALIDGYCNKGDLDKAYAYRDEMISKGIMASLVTYNLFI 363
>gi|224123236|ref|XP_002330266.1| predicted protein [Populus trichocarpa]
gi|222871301|gb|EEF08432.1| predicted protein [Populus trichocarpa]
Length = 590
Score = 162 bits (409), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 105/399 (26%), Positives = 187/399 (46%), Gaps = 11/399 (2%)
Query: 74 KKWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVS 133
K W + +E+ +RI+S + + F ++I K+G KA++ + M G P+VV+
Sbjct: 174 KAWVLYAEMFR-MRIKS----SVVTFNIMINVLCKEGKLKKAKEFIGLMEALGIKPNVVT 228
Query: 134 HTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLL 193
+ ++ Y GR + A IF M+ G +P + TY + + K +EA + +
Sbjct: 229 YNTIIHGYCSRGRVEGARMIFDLMKCRGVKPDSYTYGSFISGMCKEGKLEEASGMLEKM- 287
Query: 194 DEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMS---FET 250
++ L+P ++ +I Y G E A M G+ + TYN L+ +
Sbjct: 288 --KEIGLRPTAVTYNTLIDGYCNKGNLEMAFDYRDKMVREGLMPTVSTYNMLIHALFLDC 345
Query: 251 NYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYN 310
E I +M GL PD V+Y +LIN Y + ++A + +EM+ G++PT Y
Sbjct: 346 KMDEADGIIKEMSEKGLVPDSVTYNILINGYCRCGNVKKAFTLHDEMISKGIQPTRVTYT 405
Query: 311 ILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQD 370
L+ + G + QA +F+ + R PD+ + ++ + +M+ A + + Q
Sbjct: 406 SLIYVLSKRGRMKQADDLFEKIVRKGIFPDLIMFNALIDGHCANGNMDRAFAMLKEMDQM 465
Query: 371 GFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSA 430
VP+ +T+ TL++G + +E E+ ++M+ GIKP+ + T++ Y K D A
Sbjct: 466 KVVPDEVTFNTLMQGRCREGKVEAARELIEEMKSRGIKPDHISYNTLISGYSKRGDMKDA 525
Query: 431 VVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELL 469
EM S GF P N L+ +E + A +LL
Sbjct: 526 FRVRDEMLSIGFNPTLLTYNALIQGLCKNEEGDHAEQLL 564
Score = 132 bits (331), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 85/327 (25%), Positives = 159/327 (48%), Gaps = 6/327 (1%)
Query: 130 SVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVF 189
+ V + L+ A R +A F M+ G P +L LF+++N+ ++A ++
Sbjct: 120 TYVLYDLLIRACCELKRGDDAFECFDMMKGKGVIPHVHACNDMLSLFLKSNRTEKAWVLY 179
Query: 190 MTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFE 249
+ + +K F++MI + K G +KA++ LM G++ + VTYN+++
Sbjct: 180 AEMF---RMRIKSSVVTFNIMINVLCKEGKLKKAKEFIGLMEALGIKPNVVTYNTIIHGY 236
Query: 250 TNYKEVS---KIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTH 306
+ V I+D M+ G++PD +Y I+ K + EEA + E+M + G+RPT
Sbjct: 237 CSRGRVEGARMIFDLMKCRGVKPDSYTYGSFISGMCKEGKLEEASGMLEKMKEIGLRPTA 296
Query: 307 KAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRR 366
YN L+D + G ++ A M R+ P + +Y ++ A M+ A+ +
Sbjct: 297 VTYNTLIDGYCNKGNLEMAFDYRDKMVREGLMPTVSTYNMLIHALFLDCKMDEADGIIKE 356
Query: 367 LKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKD 426
+ + G VP+ +TY LI GY + N++K ++D+M GI+P + +T+++ K
Sbjct: 357 MSEKGLVPDSVTYNILINGYCRCGNVKKAFTLHDEMISKGIQPTRVTYTSLIYVLSKRGR 416
Query: 427 FDSAVVWYKEMESCGFPPDQKAKNILL 453
A ++++ G PD N L+
Sbjct: 417 MKQADDLFEKIVRKGIFPDLIMFNALI 443
Score = 128 bits (322), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 86/324 (26%), Positives = 153/324 (47%), Gaps = 6/324 (1%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
I+ K+G +A +L M + G P+ V++ L++ Y G + A +M G
Sbjct: 267 FISGMCKEGKLEEASGMLEKMKEIGLRPTAVTYNTLIDGYCNKGNLEMAFDYRDKMVREG 326
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
P+ TY +++ K EA+ + + EK L PD ++++I Y + G +
Sbjct: 327 LMPTVSTYNMLIHALFLDCKMDEADGIIKEM--SEKG-LVPDSVTYNILINGYCRCGNVK 383
Query: 222 KARKLFALMAERGVQQSTVTYNSL---MSFETNYKEVSKIYDQMQRAGLQPDVVSYALLI 278
KA L M +G+Q + VTY SL +S K+ +++++ R G+ PD++ + LI
Sbjct: 384 KAFTLHDEMISKGIQPTRVTYTSLIYVLSKRGRMKQADDLFEKIVRKGIFPDLIMFNALI 443
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCS 338
+ + + A A+ +EM V P +N L+ G V+ AR + + M+
Sbjct: 444 DGHCANGNMDRAFAMLKEMDQMKVVPDEVTFNTLMQGRCREGKVEAARELIEEMKSRGIK 503
Query: 339 PDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEI 398
PD SY T++S Y DM+ A + + GF P ++TY LI+G K + ++
Sbjct: 504 PDHISYNTLISGYSKRGDMKDAFRVRDEMLSIGFNPTLLTYNALIQGLCKNEEGDHAEQL 563
Query: 399 YDKMRVNGIKPNQTIFTTIMDAYG 422
+M GI PN + ++++ G
Sbjct: 564 LKEMISKGITPNDNTYLSLIEGIG 587
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 71/292 (24%), Positives = 132/292 (45%), Gaps = 8/292 (2%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
LI Y +G+ A M ++G P+V ++ L+ A + A+ I + M G
Sbjct: 302 LIDGYCNKGNLEMAFDYRDKMVREGLMPTVSTYNMLIHALFLDCKMDEADGIIKEMSEKG 361
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSP-LKPDQKMFHMMIYMYKKAGGY 220
P ++TY I++ + K+A TL DE S ++P + + +IY+ K G
Sbjct: 362 LVPDSVTYNILINGYCRCGNVKKA----FTLHDEMISKGIQPTRVTYTSLIYVLSKRGRM 417
Query: 221 EKARKLFALMAERGVQQSTVTYNSLMSFET---NYKEVSKIYDQMQRAGLQPDVVSYALL 277
++A LF + +G+ + +N+L+ N + +M + + PD V++ L
Sbjct: 418 KQADDLFEKIVRKGIFPDLIMFNALIDGHCANGNMDRAFAMLKEMDQMKVVPDEVTFNTL 477
Query: 278 INAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRC 337
+ + + E A + EEM G++P H +YN L+ ++ G + A V M
Sbjct: 478 MQGRCREGKVEAARELIEEMKSRGIKPDHISYNTLISGYSKRGDMKDAFRVRDEMLSIGF 537
Query: 338 SPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKV 389
+P + +Y ++ + + AE+ + + G PN TY +LI+G V
Sbjct: 538 NPTLLTYNALIQGLCKNEEGDHAEQLLKEMISKGITPNDNTYLSLIEGIGNV 589
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/241 (24%), Positives = 114/241 (47%), Gaps = 6/241 (2%)
Query: 219 GYEKARKLF-ALMAERGVQ--QSTVTYNSLMSFETNYK---EVSKIYDQMQRAGLQPDVV 272
G R++F L RGV ++ V Y+ L+ K + + +D M+ G+ P V
Sbjct: 98 GVYSIREVFNELGVARGVLGIKTYVLYDLLIRACCELKRGDDAFECFDMMKGKGVIPHVH 157
Query: 273 SYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCM 332
+ +++ + K+ R E+A ++ EM ++ + +NI+++ G + +A+ M
Sbjct: 158 ACNDMLSLFLKSNRTEKAWVLYAEMFRMRIKSSVVTFNIMINVLCKEGKLKKAKEFIGLM 217
Query: 333 RRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNL 392
P++ +Y T++ Y + +EGA F +K G P+ TYG+ I G K L
Sbjct: 218 EALGIKPNVVTYNTIIHGYCSRGRVEGARMIFDLMKCRGVKPDSYTYGSFISGMCKEGKL 277
Query: 393 EKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNIL 452
E+ + +KM+ G++P + T++D Y + + A + +M G P N+L
Sbjct: 278 EEASGMLEKMKEIGLRPTAVTYNTLIDGYCNKGNLEMAFDYRDKMVREGLMPTVSTYNML 337
Query: 453 L 453
+
Sbjct: 338 I 338
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 75/198 (37%), Gaps = 35/198 (17%)
Query: 272 VSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKC 331
V Y LLI A + +R ++A F+ M GV P A N +L F S ++A ++
Sbjct: 122 VLYDLLIRACCELKRGDDAFECFDMMKGKGVIPHVHACNDMLSLFLKSNRTEKAWVLY-- 179
Query: 332 MRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNN 391
AE F R+K +V+T+ +I K
Sbjct: 180 ----------------------------AEMFRMRIKS-----SVVTFNIMINVLCKEGK 206
Query: 392 LEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNI 451
L+K E M GIKPN + TI+ Y + A + + M+ G PD
Sbjct: 207 LKKAKEFIGLMEALGIKPNVVTYNTIIHGYCSRGRVEGARMIFDLMKCRGVKPDSYTYGS 266
Query: 452 LLSLAKTADERNEANELL 469
+S + EA+ +L
Sbjct: 267 FISGMCKEGKLEEASGML 284
>gi|356530296|ref|XP_003533718.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g18940-like [Glycine max]
Length = 830
Score = 162 bits (409), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 108/446 (24%), Positives = 202/446 (45%), Gaps = 42/446 (9%)
Query: 74 KKWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVS 133
+ W + E+L+ +R + +F+E +I+A G++G ++A K L+ + GY P V
Sbjct: 266 RSWGRILELLDEMRSKGL-EFDEFTCSTVISACGREGMLDEARKFLAELKLNGYKPGTVM 324
Query: 134 HTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLL 193
+ ++++ +G+ G Y A +I + M+ + P ++TY + +V A E V T+
Sbjct: 325 YNSMLQVFGKAGIYTEALSILKEMEDNNCPPDSITYNELAATYVRAGFLDEGMAVIDTMT 384
Query: 194 DEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSF----- 248
+ + P+ + +I Y KAG + A +LF+ M + G + TYNS+++
Sbjct: 385 SKG---VMPNAITYTTVIDAYGKAGREDDALRLFSKMKDLGCAPNVYTYNSVLAMLGKKS 441
Query: 249 ---------------------------------ETNYKEVSKIYDQMQRAGLQPDVVSYA 275
E + V+K+ +M+ G +PD ++
Sbjct: 442 RTEDVIKVLCEMKLNGCAPNRATWNTMLAVCSEEGKHNYVNKVLREMKNCGFEPDKDTFN 501
Query: 276 LLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRD 335
LI++Y + E ++ ++ EM+ +G P YN LL+A A G A +V + M+
Sbjct: 502 TLISSYARCGSEVDSAKMYGEMVKSGFTPCVTTYNALLNALAHRGDWKAAESVIQDMQTK 561
Query: 336 RCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKM 395
P+ SY+ +L Y A ++ G EK + + P+ I TL+ K +L M
Sbjct: 562 GFKPNETSYSLLLHCYSKAGNVRGIEKVEKEIYDGQVFPSWILLRTLVLSNHKCRHLRGM 621
Query: 396 MEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSL 455
+D+++ G KP+ + +++ + +NK F A + CG P+ N L+ L
Sbjct: 622 ERAFDQLQKYGYKPDLVVINSMLSMFSRNKMFSKAREMLHFIHECGLQPNLFTYNCLMDL 681
Query: 456 AKTADERNEANELLGNFNHPNNEPGI 481
DE +A E+L + EP +
Sbjct: 682 YVREDECWKAEEVLKGIQNSVPEPDV 707
Score = 145 bits (365), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 96/402 (23%), Positives = 188/402 (46%), Gaps = 9/402 (2%)
Query: 63 VLGTLVR-LKQLKKWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSF 121
V+ +VR L + + ++ S++ + + ++ + + + ++ AY + G + +A +
Sbjct: 183 VVELMVRILGRESQHSIASKLFDLIPVEKY-SLDVRAYTTILHAYARSGKYKRAIDLFDK 241
Query: 122 MNKKGYAPSVVSHTALMEAYGRGGR-YKNAEAIFRRMQSSGPRPSALTYQIILKLFVEAN 180
M G P++V++ +++ YG+ GR + + M+S G T ++
Sbjct: 242 MEGIGLDPTLVTYNVMLDVYGKMGRSWGRILELLDEMRSKGLEFDEFTCSTVISACGREG 301
Query: 181 KFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTV 240
EA + L + + KP M++ M+ ++ KAG Y +A + M + ++
Sbjct: 302 MLDEARKFLAEL---KLNGYKPGTVMYNSMLQVFGKAGIYTEALSILKEMEDNNCPPDSI 358
Query: 241 TYNSLMSFETN---YKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEM 297
TYN L + E + D M G+ P+ ++Y +I+AYGKA RE++AL +F +M
Sbjct: 359 TYNELAATYVRAGFLDEGMAVIDTMTSKGVMPNAITYTTVIDAYGKAGREDDALRLFSKM 418
Query: 298 LDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDM 357
D G P YN +L + V M+ + C+P+ ++ TML+
Sbjct: 419 KDLGCAPNVYTYNSVLAMLGKKSRTEDVIKVLCEMKLNGCAPNRATWNTMLAVCSEEGKH 478
Query: 358 EGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTI 417
K R +K GF P+ T+ TLI YA+ + ++Y +M +G P T + +
Sbjct: 479 NYVNKVLREMKNCGFEPDKDTFNTLISSYARCGSEVDSAKMYGEMVKSGFTPCVTTYNAL 538
Query: 418 MDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTA 459
++A D+ +A ++M++ GF P++ + ++LL A
Sbjct: 539 LNALAHRGDWKAAESVIQDMQTKGFKPNETSYSLLLHCYSKA 580
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 99/366 (27%), Positives = 179/366 (48%), Gaps = 10/366 (2%)
Query: 101 MLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSS 160
+++ G++ + A K+ + + Y+ V ++T ++ AY R G+YK A +F +M+
Sbjct: 186 LMVRILGRESQHSIASKLFDLIPVEKYSLDVRAYTTILHAYARSGKYKRAIDLFDKMEGI 245
Query: 161 GPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSP-LKPDQKMFHMMIYMYKKAGG 219
G P+ +TY ++L ++ K + + LLDE +S L+ D+ +I + G
Sbjct: 246 GLDPTLVTYNVMLDVY---GKMGRSWGRILELLDEMRSKGLEFDEFTCSTVISACGREGM 302
Query: 220 YEKARKLFALMAERGVQQSTVTYNSLMSFETN---YKEVSKIYDQMQRAGLQPDVVSYAL 276
++ARK A + G + TV YNS++ Y E I +M+ PD ++Y
Sbjct: 303 LDEARKFLAELKLNGYKPGTVMYNSMLQVFGKAGIYTEALSILKEMEDNNCPPDSITYNE 362
Query: 277 LINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDR 336
L Y +A +E +AV + M GV P Y ++DA+ +G D A +F M+
Sbjct: 363 LAATYVRAGFLDEGMAVIDTMTSKGVMPNAITYTTVIDAYGKAGREDDALRLFSKMKDLG 422
Query: 337 CSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMM 396
C+P++ +Y ++L+ S E K +K +G PN T+ T++ ++ +
Sbjct: 423 CAPNVYTYNSVLAMLGKKSRTEDVIKVLCEMKLNGCAPNRATWNTMLAVCSEEGKHNYVN 482
Query: 397 EIYDKMRVNGIKPNQTIFTTIMDAYGK-NKDFDSAVVWYKEMESCGFPPDQKAKNILL-S 454
++ +M+ G +P++ F T++ +Y + + DSA + Y EM GF P N LL +
Sbjct: 483 KVLREMKNCGFEPDKDTFNTLISSYARCGSEVDSAKM-YGEMVKSGFTPCVTTYNALLNA 541
Query: 455 LAKTAD 460
LA D
Sbjct: 542 LAHRGD 547
Score = 121 bits (304), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 94/402 (23%), Positives = 174/402 (43%), Gaps = 14/402 (3%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + + +I AYGK G + A ++ S M G AP+V ++ +++ G+ R ++ +
Sbjct: 391 NAITYTTVIDAYGKAGREDDALRLFSKMKDLGCAPNVYTYNSVLAMLGKKSRTEDVIKVL 450
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
M+ +G P+ T+ +L + E K +V L + + +PD+ F+ +I Y
Sbjct: 451 CEMKLNGCAPNRATWNTMLAVCSEEGKHNYVNKV---LREMKNCGFEPDKDTFNTLISSY 507
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSLM---SFETNYKEVSKIYDQMQRAGLQPDV 271
+ G + K++ M + G TYN+L+ + ++K + MQ G +P+
Sbjct: 508 ARCGSEVDSAKMYGEMVKSGFTPCVTTYNALLNALAHRGDWKAAESVIQDMQTKGFKPNE 567
Query: 272 VSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGM----VDQART 327
SY+LL++ Y KA V +E+ D V P+ ILL +S +
Sbjct: 568 TSYSLLLHCYSKAGNVRGIEKVEKEIYDGQVFPSW----ILLRTLVLSNHKCRHLRGMER 623
Query: 328 VFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYA 387
F +++ PD+ +MLS + A + + + G PN+ TY L+ Y
Sbjct: 624 AFDQLQKYGYKPDLVVINSMLSMFSRNKMFSKAREMLHFIHECGLQPNLFTYNCLMDLYV 683
Query: 388 KVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQK 447
+ + K E+ ++ + +P+ + T++ + + A+ EM + G P
Sbjct: 684 REDECWKAEEVLKGIQNSVPEPDVVSYNTVIKGFCRKGLMQEAIRVLSEMTTKGIQPTIV 743
Query: 448 AKNILLSLAKTADERNEANELLGNFNHPNNEPGINGLSISVD 489
N LS + +EANE++ N P I VD
Sbjct: 744 TYNTFLSGYAGMELFDEANEVIRFMIEHNCRPSELTYKILVD 785
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 75/335 (22%), Positives = 152/335 (45%), Gaps = 10/335 (2%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
++ ++G N KVL M G+ P + L+ +Y R G ++ ++ M SG
Sbjct: 468 MLAVCSEEGKHNYVNKVLREMKNCGFEPDKDTFNTLISSYARCGSEVDSAKMYGEMVKSG 527
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
P TY +L +K AE V D + KP++ + ++++ Y KAG
Sbjct: 528 FTPCVTTYNALLNALAHRGDWKAAESVIQ---DMQTKGFKPNETSYSLLLHCYSKAGNVR 584
Query: 222 KARKLFALMAERGVQQSTVTYNSLMSFETNYK-----EVSKIYDQMQRAGLQPDVVSYAL 276
K+ + + V S + +L+ +N+K + + +DQ+Q+ G +PD+V
Sbjct: 585 GIEKVEKEIYDGQVFPSWILLRTLVL--SNHKCRHLRGMERAFDQLQKYGYKPDLVVINS 642
Query: 277 LINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDR 336
+++ + + + +A + + + G++P YN L+D + +A V K ++
Sbjct: 643 MLSMFSRNKMFSKAREMLHFIHECGLQPNLFTYNCLMDLYVREDECWKAEEVLKGIQNSV 702
Query: 337 CSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMM 396
PD+ SY T++ + M+ A + + G P ++TY T + GYA + ++
Sbjct: 703 PEPDVVSYNTVIKGFCRKGLMQEAIRVLSEMTTKGIQPTIVTYNTFLSGYAGMELFDEAN 762
Query: 397 EIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAV 431
E+ M + +P++ + ++D Y K + A+
Sbjct: 763 EVIRFMIEHNCRPSELTYKILVDGYCKAGKHEEAM 797
Score = 119 bits (299), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 75/314 (23%), Positives = 151/314 (48%), Gaps = 7/314 (2%)
Query: 170 QIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFAL 229
++++++ ++ A ++F L+ EK L D + + +++ Y ++G Y++A LF
Sbjct: 185 ELMVRILGRESQHSIASKLF-DLIPVEKYSL--DVRAYTTILHAYARSGKYKRAIDLFDK 241
Query: 230 MAERGVQQSTVTYNSLM----SFETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKAR 285
M G+ + VTYN ++ ++ + ++ D+M+ GL+ D + + +I+A G+
Sbjct: 242 MEGIGLDPTLVTYNVMLDVYGKMGRSWGRILELLDEMRSKGLEFDEFTCSTVISACGREG 301
Query: 286 REEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYT 345
+EA E+ G +P YN +L F +G+ +A ++ K M + C PD +Y
Sbjct: 302 MLDEARKFLAELKLNGYKPGTVMYNSMLQVFGKAGIYTEALSILKEMEDNNCPPDSITYN 361
Query: 346 TMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVN 405
+ + YV A ++ + G +PN ITY T+I Y K + + ++ KM+
Sbjct: 362 ELAATYVRAGFLDEGMAVIDTMTSKGVMPNAITYTTVIDAYGKAGREDDALRLFSKMKDL 421
Query: 406 GIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEA 465
G PN + +++ GK + + EM+ G P++ N +L++ + N
Sbjct: 422 GCAPNVYTYNSVLAMLGKKSRTEDVIKVLCEMKLNGCAPNRATWNTMLAVCSEEGKHNYV 481
Query: 466 NELLGNFNHPNNEP 479
N++L + EP
Sbjct: 482 NKVLREMKNCGFEP 495
Score = 62.0 bits (149), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 52/232 (22%), Positives = 106/232 (45%), Gaps = 9/232 (3%)
Query: 254 EVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEML-----DAGVRPTHKA 308
E++ ++ ++ L+ D S L+ A + E AL +FE D +R ++
Sbjct: 127 ELNDFFNSVKFELLEADFPS---LLKALDLSGNWERALLLFEWGWLHFGSDQNLRLDNQV 183
Query: 309 YNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLK 368
+++ A +F + ++ S D+ +YTT+L AY + + A F +++
Sbjct: 184 VELMVRILGRESQHSIASKLFDLIPVEKYSLDVRAYTTILHAYARSGKYKRAIDLFDKME 243
Query: 369 QDGFVPNVITYGTLIKGYAKVN-NLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDF 427
G P ++TY ++ Y K+ + +++E+ D+MR G++ ++ +T++ A G+
Sbjct: 244 GIGLDPTLVTYNVMLDVYGKMGRSWGRILELLDEMRSKGLEFDEFTCSTVISACGREGML 303
Query: 428 DSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEP 479
D A + E++ G+ P N +L + A EA +L N P
Sbjct: 304 DEARKFLAELKLNGYKPGTVMYNSMLQVFGKAGIYTEALSILKEMEDNNCPP 355
>gi|125558723|gb|EAZ04259.1| hypothetical protein OsI_26403 [Oryza sativa Indica Group]
Length = 528
Score = 162 bits (409), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 94/356 (26%), Positives = 180/356 (50%), Gaps = 6/356 (1%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
L+ Y K G AE+VL M++ G AP +++ L++AY R GR+++A + + M++ G
Sbjct: 165 LLKGYVKIGSLKNAEQVLDEMSQCGVAPDEATYSLLVDAYTRAGRWESARILLKEMEADG 224
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
+PS+ + IL F + ++++A F L + S ++PD+ +++MI + K
Sbjct: 225 VKPSSYVFSRILAGFRDRGEWQKA---FAVLREMHASGVRPDRHFYNVMIDTFGKYNCLG 281
Query: 222 KARKLFALMAERGVQQSTVTYNSLMSFETN---YKEVSKIYDQMQRAGLQPDVVSYALLI 278
A F M E G++ VT+N+L+ + +++D+M+ + +Y ++I
Sbjct: 282 HAMDAFDRMREEGIEPDVVTWNTLIDAHCKGGRHDRAIELFDEMRESNCPLGTTTYNIMI 341
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCS 338
N G+ +R E A+ EM + G+ P Y L+D + SG +A + M+ D
Sbjct: 342 NLLGEEQRWEGVEAMLAEMKEQGLVPNIITYTTLVDVYGRSGRFKEAVDCIEAMKADGLK 401
Query: 339 PDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEI 398
P Y +++AY + A + ++ DG + + +LI + + + + +
Sbjct: 402 PSSTMYHALVNAYAQRGLADHALNVVKAMRADGLEASTVVLNSLINAFGEDRRIAEAFSV 461
Query: 399 YDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLS 454
M+ NG++P+ +TT+M A + + F+ V Y+EM + G PD+KA+ +L S
Sbjct: 462 LQFMKENGLRPDVITYTTLMKALIRVEQFEKVPVIYEEMITSGCAPDRKARAMLRS 517
Score = 152 bits (384), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 98/358 (27%), Positives = 176/358 (49%), Gaps = 9/358 (2%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
LI+A+ + + A ++L+ G P + TAL+ + G R AEA+F +G
Sbjct: 94 LISAFARARLPDAALELLASAQAIGLTPRSNAVTALISSLGSARRVAEAEALFLEFFLAG 153
Query: 162 P-RPSALTYQIILKLFVEANKFKEAEEVFMTLLDE-EKSPLKPDQKMFHMMIYMYKKAGG 219
+P Y +LK +V+ K AE+V LDE + + PD+ + +++ Y +AG
Sbjct: 154 EIKPRTRAYNALLKGYVKIGSLKNAEQV----LDEMSQCGVAPDEATYSLLVDAYTRAGR 209
Query: 220 YEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSK---IYDQMQRAGLQPDVVSYAL 276
+E AR L M GV+ S+ ++ +++ + E K + +M +G++PD Y +
Sbjct: 210 WESARILLKEMEADGVKPSSYVFSRILAGFRDRGEWQKAFAVLREMHASGVRPDRHFYNV 269
Query: 277 LINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDR 336
+I+ +GK A+ F+ M + G+ P +N L+DA G D+A +F MR
Sbjct: 270 MIDTFGKYNCLGHAMDAFDRMREEGIEPDVVTWNTLIDAHCKGGRHDRAIELFDEMRESN 329
Query: 337 CSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMM 396
C +Y M++ EG E +K+ G VPN+ITY TL+ Y + ++ +
Sbjct: 330 CPLGTTTYNIMINLLGEEQRWEGVEAMLAEMKEQGLVPNIITYTTLVDVYGRSGRFKEAV 389
Query: 397 EIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLS 454
+ + M+ +G+KP+ T++ +++AY + D A+ K M + G N L++
Sbjct: 390 DCIEAMKADGLKPSSTMYHALVNAYAQRGLADHALNVVKAMRADGLEASTVVLNSLIN 447
Score = 101 bits (252), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 68/263 (25%), Positives = 126/263 (47%), Gaps = 4/263 (1%)
Query: 197 KSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVS 256
+S L+PD +F +I + +A + A +L A G+ + +L+S + + V+
Sbjct: 81 ESRLEPDAPLFSDLISAFARARLPDAALELLASAQAIGLTPRSNAVTALISSLGSARRVA 140
Query: 257 K---IYDQMQRAG-LQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNIL 312
+ ++ + AG ++P +Y L+ Y K + A V +EM GV P Y++L
Sbjct: 141 EAEALFLEFFLAGEIKPRTRAYNALLKGYVKIGSLKNAEQVLDEMSQCGVAPDEATYSLL 200
Query: 313 LDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGF 372
+DA+ +G + AR + K M D P ++ +L+ + + + + A R + G
Sbjct: 201 VDAYTRAGRWESARILLKEMEADGVKPSSYVFSRILAGFRDRGEWQKAFAVLREMHASGV 260
Query: 373 VPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVV 432
P+ Y +I + K N L M+ +D+MR GI+P+ + T++DA+ K D A+
Sbjct: 261 RPDRHFYNVMIDTFGKYNCLGHAMDAFDRMREEGIEPDVVTWNTLIDAHCKGGRHDRAIE 320
Query: 433 WYKEMESCGFPPDQKAKNILLSL 455
+ EM P NI+++L
Sbjct: 321 LFDEMRESNCPLGTTTYNIMINL 343
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 108/218 (49%), Gaps = 6/218 (2%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
LI A+ K G ++A ++ M + ++ ++ G R++ EA+ M+ G
Sbjct: 305 LIDAHCKGGRHDRAIELFDEMRESNCPLGTTTYNIMINLLGEEQRWEGVEAMLAEMKEQG 364
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
P+ +TY ++ ++ + +FKEA + + + LKP M+H ++ Y + G +
Sbjct: 365 LVPNIITYTTLVDVYGRSGRFKEAVDCIEAM---KADGLKPSSTMYHALVNAYAQRGLAD 421
Query: 222 KARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSKIYDQMQ---RAGLQPDVVSYALLI 278
A + M G++ STV NSL++ + +++ + +Q GL+PDV++Y L+
Sbjct: 422 HALNVVKAMRADGLEASTVVLNSLINAFGEDRRIAEAFSVLQFMKENGLRPDVITYTTLM 481
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAF 316
A + + E+ ++EEM+ +G P KA +L A
Sbjct: 482 KALIRVEQFEKVPVIYEEMITSGCAPDRKARAMLRSAL 519
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 48/201 (23%), Positives = 91/201 (45%), Gaps = 1/201 (0%)
Query: 254 EVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILL 313
EV +Y + L+PD ++ LI+A+ +AR + AL + G+ P A L+
Sbjct: 71 EVPSMYCGGGESRLEPDAPLFSDLISAFARARLPDAALELLASAQAIGLTPRSNAVTALI 130
Query: 314 DAFAISGMVDQARTVF-KCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGF 372
+ + V +A +F + P +Y +L YV ++ AE+ + Q G
Sbjct: 131 SSLGSARRVAEAEALFLEFFLAGEIKPRTRAYNALLKGYVKIGSLKNAEQVLDEMSQCGV 190
Query: 373 VPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVV 432
P+ TY L+ Y + E + +M +G+KP+ +F+ I+ + ++ A
Sbjct: 191 APDEATYSLLVDAYTRAGRWESARILLKEMEADGVKPSSYVFSRILAGFRDRGEWQKAFA 250
Query: 433 WYKEMESCGFPPDQKAKNILL 453
+EM + G PD+ N+++
Sbjct: 251 VLREMHASGVRPDRHFYNVMI 271
>gi|356524104|ref|XP_003530672.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
mitochondrial-like [Glycine max]
Length = 742
Score = 162 bits (409), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 102/423 (24%), Positives = 213/423 (50%), Gaps = 13/423 (3%)
Query: 37 QIEEVGSAVAVLRSERTRGQPLPKDLVLGTLVRLKQLKKWNVVSEVLEWLRI---QSWWD 93
Q+E++G + ++ + +G P +++ L K V E + LR+ Q +
Sbjct: 299 QVEQLGKVLKLMEELQRKGLK-PNQYTYNSIISF--LCKTGRVVEAEQVLRVMKNQRIFP 355
Query: 94 FNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAI 153
N + + LI+ +GK G+ + K+ M +K P V++T+++ + G+ A +
Sbjct: 356 DNVV-YTTLISGFGKSGNVSVEYKLFDEMKRKKIVPDFVTYTSMIHGLCQAGKVVEARKL 414
Query: 154 FRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYM 213
F M S G +P +TY ++ + +A + KEA + ++++ L P+ + ++
Sbjct: 415 FSEMLSKGLKPDEVTYTALIDGYCKAGEMKEAFSLHNQMVEK---GLTPNVVTYTALVDG 471
Query: 214 YKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFET---NYKEVSKIYDQMQRAGLQPD 270
K G + A +L M+E+G+Q + TYN+L++ N ++ K+ ++M AG PD
Sbjct: 472 LCKCGEVDIANELLHEMSEKGLQPNVCTYNALINGLCKVGNIEQAVKLMEEMDLAGFFPD 531
Query: 271 VVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFK 330
++Y +++AY K +A + MLD G++PT +N+L++ F +SGM++ + K
Sbjct: 532 TITYTTIMDAYCKMGEMAKAHELLRIMLDKGLQPTIVTFNVLMNGFCMSGMLEDGERLIK 591
Query: 331 CMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVN 390
M P+ ++ +++ Y ++M + ++ + G VP+ TY LIKG+ K
Sbjct: 592 WMLDKGIMPNATTFNSLMKQYCIRNNMRATIEIYKGMHAQGVVPDTNTYNILIKGHCKAR 651
Query: 391 NLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKN 450
N+++ ++ +M G + +++ + K K F+ A ++EM + GF +++ +
Sbjct: 652 NMKEAWFLHKEMVEKGFSLTAASYNSLIKGFYKRKKFEEARKLFEEMRTHGFIAEKEIYD 711
Query: 451 ILL 453
I +
Sbjct: 712 IFV 714
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 103/417 (24%), Positives = 180/417 (43%), Gaps = 37/417 (8%)
Query: 84 EWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGR 143
E+ + W N + + +++ + G +A +L M +G P VVS++ +++ Y +
Sbjct: 242 EYSEVGVCW--NTVSYNIILHLLCQLGKVKEAHSLLIQMEFRGNVPDVVSYSVIVDGYCQ 299
Query: 144 GGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSP---- 199
+ + +Q G +P+ TY I+ + + EAE+V + ++ P
Sbjct: 300 VEQLGKVLKLMEELQRKGLKPNQYTYNSIISFLCKTGRVVEAEQVLRVMKNQRIFPDNVV 359
Query: 200 ----------------------------LKPDQKMFHMMIYMYKKAGGYEKARKLFALMA 231
+ PD + MI+ +AG +ARKLF+ M
Sbjct: 360 YTTLISGFGKSGNVSVEYKLFDEMKRKKIVPDFVTYTSMIHGLCQAGKVVEARKLFSEML 419
Query: 232 ERGVQQSTVTYNSLMSFETN---YKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREE 288
+G++ VTY +L+ KE +++QM GL P+VV+Y L++ K +
Sbjct: 420 SKGLKPDEVTYTALIDGYCKAGEMKEAFSLHNQMVEKGLTPNVVTYTALVDGLCKCGEVD 479
Query: 289 EALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTML 348
A + EM + G++P YN L++ G ++QA + + M PD +YTT++
Sbjct: 480 IANELLHEMSEKGLQPNVCTYNALINGLCKVGNIEQAVKLMEEMDLAGFFPDTITYTTIM 539
Query: 349 SAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIK 408
AY +M A + R + G P ++T+ L+ G+ LE + M GI
Sbjct: 540 DAYCKMGEMAKAHELLRIMLDKGLQPTIVTFNVLMNGFCMSGMLEDGERLIKWMLDKGIM 599
Query: 409 PNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEA 465
PN T F ++M Y + + + YK M + G PD NIL+ A EA
Sbjct: 600 PNATTFNSLMKQYCIRNNMRATIEIYKGMHAQGVVPDTNTYNILIKGHCKARNMKEA 656
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 88/344 (25%), Positives = 173/344 (50%), Gaps = 8/344 (2%)
Query: 115 AEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILK 174
A +V ++ G + VS+ ++ + G+ K A ++ +M+ G P ++Y +I+
Sbjct: 236 AFRVFREYSEVGVCWNTVSYNIILHLLCQLGKVKEAHSLLIQMEFRGNVPDVVSYSVIVD 295
Query: 175 LFVEANKFKEAEEVFMTLLDE-EKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAER 233
+ + + + + L++E ++ LKP+Q ++ +I K G +A ++ +M +
Sbjct: 296 GYCQVEQLGKV----LKLMEELQRKGLKPNQYTYNSIISFLCKTGRVVEAEQVLRVMKNQ 351
Query: 234 GVQQSTVTYNSLMSFETNYKEVS---KIYDQMQRAGLQPDVVSYALLINAYGKARREEEA 290
+ V Y +L+S VS K++D+M+R + PD V+Y +I+ +A + EA
Sbjct: 352 RIFPDNVVYTTLISGFGKSGNVSVEYKLFDEMKRKKIVPDFVTYTSMIHGLCQAGKVVEA 411
Query: 291 LAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSA 350
+F EML G++P Y L+D + +G + +A ++ M +P++ +YT ++
Sbjct: 412 RKLFSEMLSKGLKPDEVTYTALIDGYCKAGEMKEAFSLHNQMVEKGLTPNVVTYTALVDG 471
Query: 351 YVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPN 410
+++ A + + + G PNV TY LI G KV N+E+ +++ ++M + G P+
Sbjct: 472 LCKCGEVDIANELLHEMSEKGLQPNVCTYNALINGLCKVGNIEQAVKLMEEMDLAGFFPD 531
Query: 411 QTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLS 454
+TTIMDAY K + A + M G P N+L++
Sbjct: 532 TITYTTIMDAYCKMGEMAKAHELLRIMLDKGLQPTIVTFNVLMN 575
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 86/335 (25%), Positives = 156/335 (46%), Gaps = 14/335 (4%)
Query: 161 GPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGY 220
G P L + + ++ VEA EA ++F LL+ +F + + G
Sbjct: 178 GAHP--LVFDVFFQVLVEAGLLLEAGKLFDKLLNYGVLVSVDSCNLF--LARLSNSFDGI 233
Query: 221 EKARKLFALMAERGVQQSTVTYNSLMSFETNY---KEVSKIYDQMQRAGLQPDVVSYALL 277
A ++F +E GV +TV+YN ++ KE + QM+ G PDVVSY+++
Sbjct: 234 RTAFRVFREYSEVGVCWNTVSYNIILHLLCQLGKVKEAHSLLIQMEFRGNVPDVVSYSVI 293
Query: 278 INAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRC 337
++ Y + + + L + EE+ G++P YN ++ +G V +A V + M+ R
Sbjct: 294 VDGYCQVEQLGKVLKLMEELQRKGLKPNQYTYNSIISFLCKTGRVVEAEQVLRVMKNQRI 353
Query: 338 SPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMME 397
PD YTT++S + + ++ K F +K+ VP+ +TY ++I G + + + +
Sbjct: 354 FPDNVVYTTLISGFGKSGNVSVEYKLFDEMKRKKIVPDFVTYTSMIHGLCQAGKVVEARK 413
Query: 398 IYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAK 457
++ +M G+KP++ +T ++D Y K + A + +M G P+ L+
Sbjct: 414 LFSEMLSKGLKPDEVTYTALIDGYCKAGEMKEAFSLHNQMVEKGLTPNVVTYTALVDGLC 473
Query: 458 TADERNEANELLGNFNHPNNEPG-------INGLS 485
E + ANELL + +P INGL
Sbjct: 474 KCGEVDIANELLHEMSEKGLQPNVCTYNALINGLC 508
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 92/357 (25%), Positives = 158/357 (44%), Gaps = 13/357 (3%)
Query: 148 KNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMF 207
+ A +FR G + ++Y IIL L + K KEA + L+ E PD +
Sbjct: 234 RTAFRVFREYSEVGVCWNTVSYNIILHLLCQLGKVKEAHSL---LIQMEFRGNVPDVVSY 290
Query: 208 HMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETN---YKEVSKIYDQMQR 264
+++ Y + K KL + +G++ + TYNS++SF E ++ M+
Sbjct: 291 SVIVDGYCQVEQLGKVLKLMEELQRKGLKPNQYTYNSIISFLCKTGRVVEAEQVLRVMKN 350
Query: 265 AGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQ 324
+ PD V Y LI+ +GK+ +F+EM + P Y ++ +G V +
Sbjct: 351 QRIFPDNVVYTTLISGFGKSGNVSVEYKLFDEMKRKKIVPDFVTYTSMIHGLCQAGKVVE 410
Query: 325 ARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIK 384
AR +F M PD +YT ++ Y A +M+ A ++ + G PNV+TY L+
Sbjct: 411 ARKLFSEMLSKGLKPDEVTYTALIDGYCKAGEMKEAFSLHNQMVEKGLTPNVVTYTALVD 470
Query: 385 GYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPP 444
G K ++ E+ +M G++PN + +++ K + + AV +EM+ GF P
Sbjct: 471 GLCKCGEVDIANELLHEMSEKGLQPNVCTYNALINGLCKVGNIEQAVKLMEEMDLAGFFP 530
Query: 445 DQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGI-------NGLSISVDEEDDD 494
D ++ E +A+ELL +P I NG +S ED +
Sbjct: 531 DTITYTTIMDAYCKMGEMAKAHELLRIMLDKGLQPTIVTFNVLMNGFCMSGMLEDGE 587
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 72/311 (23%), Positives = 139/311 (44%), Gaps = 8/311 (2%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
+E+ + LI Y K G+ +A + + M +KG P+VV++TAL++ + G A +
Sbjct: 426 DEVTYTALIDGYCKAGEMKEAFSLHNQMVEKGLTPNVVTYTALVDGLCKCGEVDIANELL 485
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDE-EKSPLKPDQKMFHMMIYM 213
M G +P+ TY ++ + ++A + L++E + + PD + ++
Sbjct: 486 HEMSEKGLQPNVCTYNALINGLCKVGNIEQA----VKLMEEMDLAGFFPDTITYTTIMDA 541
Query: 214 YKKAGGYEKARKLFALMAERGVQQSTVTYNSLM---SFETNYKEVSKIYDQMQRAGLQPD 270
Y K G KA +L +M ++G+Q + VT+N LM ++ ++ M G+ P+
Sbjct: 542 YCKMGEMAKAHELLRIMLDKGLQPTIVTFNVLMNGFCMSGMLEDGERLIKWMLDKGIMPN 601
Query: 271 VVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFK 330
++ L+ Y + +++ M GV P YNIL+ + + +A + K
Sbjct: 602 ATTFNSLMKQYCIRNNMRATIEIYKGMHAQGVVPDTNTYNILIKGHCKARNMKEAWFLHK 661
Query: 331 CMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVN 390
M S SY +++ + E A K F ++ GF+ Y + +
Sbjct: 662 EMVEKGFSLTAASYNSLIKGFYKRKKFEEARKLFEEMRTHGFIAEKEIYDIFVDVNYEEG 721
Query: 391 NLEKMMEIYDK 401
N E +E+ D+
Sbjct: 722 NWENTLELCDE 732
>gi|222613080|gb|EEE51212.1| hypothetical protein OsJ_32033 [Oryza sativa Japonica Group]
Length = 1144
Score = 162 bits (409), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 100/366 (27%), Positives = 181/366 (49%), Gaps = 14/366 (3%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + + +I A K +KA +VL+ M K G P+ ++ +++ Y G+ K A
Sbjct: 233 NVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFL 292
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
++M S G P +TY ++ + + EA ++F ++ K LKP+ + ++ Y
Sbjct: 293 KKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSM---TKRGLKPEITTYGTLLQGY 349
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSK---IYDQMQRAGLQPDV 271
G + L LM G+ + ++ L+ +V + ++ +M++ GL PD
Sbjct: 350 ATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDT 409
Query: 272 VSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKC 331
V+Y +I K+ R E+A+ FE+M+D + P + YN L+ + I D+A+ +
Sbjct: 410 VTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILE 469
Query: 332 MRRDRCSPDICSYTTMLSAYVNASDMEG----AEKFFRRLKQDGFVPNVITYGTLIKGYA 387
M DR IC T ++ +++ EG +EK F + + G P++ITY TLI GY
Sbjct: 470 ML-DR---GICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYC 525
Query: 388 KVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQK 447
+++ ++ M G+KP+ + T+++ Y K + A+V ++EMES G PD
Sbjct: 526 LAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDII 585
Query: 448 AKNILL 453
NI+L
Sbjct: 586 TYNIIL 591
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 98/390 (25%), Positives = 180/390 (46%), Gaps = 8/390 (2%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKG--YAPSVVSHTALMEAYGRGGRYKNAEA 152
N + +L+ + +A ++L M G P VVS+T ++ + + G A
Sbjct: 161 NVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAYG 220
Query: 153 IFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIY 212
+ M G P+ +TY I+ +A +A EV +++ K+ + P+ + ++ +++
Sbjct: 221 TYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMV---KNGVMPNCRTYNSIVH 277
Query: 213 MYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETN---YKEVSKIYDQMQRAGLQP 269
Y +G ++A M GV+ VTYNSLM + E K++D M + GL+P
Sbjct: 278 GYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKP 337
Query: 270 DVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVF 329
++ +Y L+ Y E + + M+ G+ P H ++IL+ A+A G VDQA VF
Sbjct: 338 EITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVF 397
Query: 330 KCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKV 389
MR+ +PD +Y T++ + +E A ++F ++ + P I Y +LI
Sbjct: 398 SKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIF 457
Query: 390 NNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAK 449
+ +K E+ +M GI + F +I+D++ K + + M G PD
Sbjct: 458 DKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITY 517
Query: 450 NILLSLAKTADERNEANELLGNFNHPNNEP 479
+ L+ A + +EA +LL + +P
Sbjct: 518 STLIDGYCLAGKMDEATKLLASMVSVGMKP 547
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 93/352 (26%), Positives = 158/352 (44%), Gaps = 34/352 (9%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNA-EAI 153
N + +LI + G + L + KKG+ ++ T L++ R +A + +
Sbjct: 90 NLCTYGILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIV 149
Query: 154 FRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYM 213
RRM G P+ +Y I+LK + N+ +EA E + ++ ++ PD + +I
Sbjct: 150 LRRMTQLGCIPNVFSYNILLKGLCDENRSQEALE-LLQMMPDDGGDCPPDVVSYTTVING 208
Query: 214 YKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSKIYDQMQRAGLQPDVVS 273
+ K G +KA Y + Y +M G+ P+VV+
Sbjct: 209 FFKEGDLDKA------------------YGT--------------YHEMLDRGILPNVVT 236
Query: 274 YALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMR 333
Y+ +I A KA+ ++A+ V M+ GV P + YN ++ + SG +A K M
Sbjct: 237 YSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMH 296
Query: 334 RDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLE 393
D PD+ +Y +++ A K F + + G P + TYGTL++GYA L
Sbjct: 297 SDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALV 356
Query: 394 KMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPD 445
+M + D M NGI PN +F+ ++ AY K D A++ + +M G PD
Sbjct: 357 EMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPD 408
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 87/393 (22%), Positives = 173/393 (44%), Gaps = 12/393 (3%)
Query: 97 MDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRR 156
MD+L K G +A K+ M K+G P + ++ L++ Y G +
Sbjct: 311 MDYLC------KNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDL 364
Query: 157 MQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKK 216
M +G P+ + I++ + + K +A VF + + L PD + +I + K
Sbjct: 365 MVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKM---RQQGLNPDTVTYGTVIGILCK 421
Query: 217 AGGYEKARKLFALMAERGVQQSTVTYNSL---MSFETNYKEVSKIYDQMQRAGLQPDVVS 273
+G E A + F M + + + YNSL + + + ++ +M G+ D +
Sbjct: 422 SGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIF 481
Query: 274 YALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMR 333
+ +I+++ K R E+ +F+ M+ GV+P Y+ L+D + ++G +D+A + M
Sbjct: 482 FNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMV 541
Query: 334 RDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLE 393
PD +Y T+++ Y S ME A FR ++ G P++ITY +++G +
Sbjct: 542 SVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTA 601
Query: 394 KMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILL 453
E+Y + +G + + + I+ KN D A+ ++ + + + NI++
Sbjct: 602 AAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMI 661
Query: 454 SLAKTADERNEANELLGNFNHPNNEPGINGLSI 486
+EA +L + P + S+
Sbjct: 662 GALLKVGRNDEAKDLFAALSANGLVPDVRTYSL 694
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 96/435 (22%), Positives = 191/435 (43%), Gaps = 41/435 (9%)
Query: 59 PKDLVLGTLVRLKQLKKWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKV 118
P+ GTL++ K V L L +++ N F +LI AY KQG ++A V
Sbjct: 337 PEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLV 396
Query: 119 LSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVE 178
S M ++G P V++ ++ + GR ++A F +M P + Y ++
Sbjct: 397 FSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCI 456
Query: 179 ANKFKEAEEVFMTLLDEE--------------------------------KSPLKPDQKM 206
+K+ +A+E+ + +LD + +KPD
Sbjct: 457 FDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIIT 516
Query: 207 FHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSKIYD------ 260
+ +I Y AG ++A KL A M G++ VTYN+L++ Y ++S++ D
Sbjct: 517 YSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLIN---GYCKISRMEDALVLFR 573
Query: 261 QMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISG 320
+M+ +G+ PD+++Y +++ + RR A ++ + ++G + YNI+L +
Sbjct: 574 EMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNN 633
Query: 321 MVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYG 380
+ D+A +F+ + + ++ M+ A + + A+ F L +G VP+V TY
Sbjct: 634 LTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYS 693
Query: 381 TLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESC 440
+ + + LE++ +++ M NG N + +I+ + D A + ++
Sbjct: 694 LMAENLIEQGLLEELDDLFLSMEENGCTANSRMLNSIVRKLLQRGDITRAGTYLFMIDEK 753
Query: 441 GFPPDQKAKNILLSL 455
F + ++ L L
Sbjct: 754 HFSLEASTASLFLDL 768
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 72/305 (23%), Positives = 121/305 (39%), Gaps = 43/305 (14%)
Query: 221 EKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSKI--YDQMQRAG---LQPDVVSYA 275
E AR +F + RG S N ++ + + + Y++M RAG + P++ +Y
Sbjct: 36 EDARHVFDELLRRGRGASIYGLNCALADVARHSPAAAVSRYNRMARAGADEVTPNLCTYG 95
Query: 276 LLINAYGKARREEEALA------------------------------------VFEEMLD 299
+LI + A R + A V M
Sbjct: 96 ILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTQ 155
Query: 300 AGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDR--CSPDICSYTTMLSAYVNASDM 357
G P +YNILL +A + + M D C PD+ SYTT+++ + D+
Sbjct: 156 LGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDL 215
Query: 358 EGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTI 417
+ A + + G +PNV+TY ++I K ++K ME+ M NG+ PN + +I
Sbjct: 216 DKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSI 275
Query: 418 MDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNN 477
+ Y + A+ + K+M S G PD N L+ EA ++ +
Sbjct: 276 VHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGL 335
Query: 478 EPGIN 482
+P I
Sbjct: 336 KPEIT 340
>gi|242069877|ref|XP_002450215.1| hypothetical protein SORBIDRAFT_05g002040 [Sorghum bicolor]
gi|241936058|gb|EES09203.1| hypothetical protein SORBIDRAFT_05g002040 [Sorghum bicolor]
Length = 862
Score = 162 bits (409), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 98/371 (26%), Positives = 175/371 (47%), Gaps = 6/371 (1%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
+I K ++AE VL M KG P VV++ +++ + AE + + M G
Sbjct: 240 IIDGLCKAQAVDRAEGVLQHMIDKGVKPDVVTYNTIIDGLCKAQAVDRAEGVLQHMIDKG 299
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
+P +TY I+ +A A+ V ++D++ +KPD + ++ +I+ Y G ++
Sbjct: 300 VKPDVVTYNTIIDGLCKAQAVDRADGVLQHMIDKD---VKPDIQTYNCLIHGYLSTGEWK 356
Query: 222 KARKLFALMAERGVQQSTVTYNSLMSFET---NYKEVSKIYDQMQRAGLQPDVVSYALLI 278
+ + M RG+ VTY+ L+ + E KI+ M R G++P+V Y +L+
Sbjct: 357 EVVRRLEEMYARGLDPDVVTYSLLLDYLCKNGKCTEARKIFYCMIRKGIKPNVTIYGILL 416
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCS 338
+ Y + + + M+ G+ P + +NI+L A+A M+D+A +F M + S
Sbjct: 417 HGYAARGAIADLTDLLDLMVANGISPNNYIFNIVLCAYAKKAMIDEAMHIFSRMSQHGLS 476
Query: 339 PDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEI 398
PD+ +Y ++ A ++ A F ++ DG PN + + +L+ G V+ EK E+
Sbjct: 477 PDVVTYGILIDALCKLGRVDDAVLKFNQMINDGVTPNSVVFNSLVYGLCTVDRWEKAEEL 536
Query: 399 YDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKT 458
+ +M G++PN F TIM A ME G P+ + N L+
Sbjct: 537 FFEMWDQGVRPNVVFFNTIMCNLCNEGQVMVAQRLIDSMERVGVRPNVISYNTLIGGHCL 596
Query: 459 ADERNEANELL 469
A +EA +LL
Sbjct: 597 AGRTDEAAQLL 607
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 86/356 (24%), Positives = 172/356 (48%), Gaps = 6/356 (1%)
Query: 101 MLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSS 160
+L+ Y +G +L M G +P+ ++ AY + A IF RM
Sbjct: 414 ILLHGYAARGAIADLTDLLDLMVANGISPNNYIFNIVLCAYAKKAMIDEAMHIFSRMSQH 473
Query: 161 GPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGY 220
G P +TY I++ + + +A F ++++ + P+ +F+ ++Y +
Sbjct: 474 GLSPDVVTYGILIDALCKLGRVDDAVLKFNQMIND---GVTPNSVVFNSLVYGLCTVDRW 530
Query: 221 EKARKLFALMAERGVQQSTVTYNSLMSFETNYKEV---SKIYDQMQRAGLQPDVVSYALL 277
EKA +LF M ++GV+ + V +N++M N +V ++ D M+R G++P+V+SY L
Sbjct: 531 EKAEELFFEMWDQGVRPNVVFFNTIMCNLCNEGQVMVAQRLIDSMERVGVRPNVISYNTL 590
Query: 278 INAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRC 337
I + A R +EA + + M+ G++P +Y+ LL + +G +D A +F+ M R
Sbjct: 591 IGGHCLAGRTDEAAQLLDVMVSVGLKPDLISYDTLLRGYCKTGRIDNAYCLFREMLRKGV 650
Query: 338 SPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMME 397
+P +Y+T+L + A++ + + + G ++ TY ++ G K N +++ +
Sbjct: 651 TPGAVTYSTILQGLFHTRRFSEAKELYLNMIKSGQQWDIYTYNIILNGLCKTNCVDEAFK 710
Query: 398 IYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILL 453
I+ + ++PN FT ++D K A+ + + S G P+ I++
Sbjct: 711 IFQSLCSKDLRPNIITFTIMIDVLFKGGRKKDAMDLFASIPSHGLVPNVVTYCIMM 766
Score = 145 bits (366), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 91/374 (24%), Positives = 169/374 (45%), Gaps = 6/374 (1%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
+I K ++A+ VL M K P + ++ L+ Y G +K M + G
Sbjct: 310 IIDGLCKAQAVDRADGVLQHMIDKDVKPDIQTYNCLIHGYLSTGEWKEVVRRLEEMYARG 369
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
P +TY ++L + K EA ++F ++ + +KP+ ++ ++++ Y G
Sbjct: 370 LDPDVVTYSLLLDYLCKNGKCTEARKIFYCMI---RKGIKPNVTIYGILLHGYAARGAIA 426
Query: 222 KARKLFALMAERGVQQSTVTYNSLMSF---ETNYKEVSKIYDQMQRAGLQPDVVSYALLI 278
L LM G+ + +N ++ + E I+ +M + GL PDVV+Y +LI
Sbjct: 427 DLTDLLDLMVANGISPNNYIFNIVLCAYAKKAMIDEAMHIFSRMSQHGLSPDVVTYGILI 486
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCS 338
+A K R ++A+ F +M++ GV P +N L+ ++A +F M
Sbjct: 487 DALCKLGRVDDAVLKFNQMINDGVTPNSVVFNSLVYGLCTVDRWEKAEELFFEMWDQGVR 546
Query: 339 PDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEI 398
P++ + T++ N + A++ +++ G PNVI+Y TLI G+ ++ ++
Sbjct: 547 PNVVFFNTIMCNLCNEGQVMVAQRLIDSMERVGVRPNVISYNTLIGGHCLAGRTDEAAQL 606
Query: 399 YDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKT 458
D M G+KP+ + T++ Y K D+A ++EM G P + +L
Sbjct: 607 LDVMVSVGLKPDLISYDTLLRGYCKTGRIDNAYCLFREMLRKGVTPGAVTYSTILQGLFH 666
Query: 459 ADERNEANELLGNF 472
+EA EL N
Sbjct: 667 TRRFSEAKELYLNM 680
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 94/412 (22%), Positives = 187/412 (45%), Gaps = 41/412 (9%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N F +++ AY K+ ++A + S M++ G +P VV++ L++A + GR +A F
Sbjct: 443 NNYIFNIVLCAYAKKAMIDEAMHIFSRMSQHGLSPDVVTYGILIDALCKLGRVDDAVLKF 502
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
+M + G P+++ + ++ +++++AEE+F + D+ ++P+ F+ ++
Sbjct: 503 NQMINDGVTPNSVVFNSLVYGLCTVDRWEKAEELFFEMWDQ---GVRPNVVFFNTIMCNL 559
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSLM---SFETNYKEVSKIYDQMQRAGLQPDV 271
G A++L M GV+ + ++YN+L+ E +++ D M GL+PD+
Sbjct: 560 CNEGQVMVAQRLIDSMERVGVRPNVISYNTLIGGHCLAGRTDEAAQLLDVMVSVGLKPDL 619
Query: 272 VSYALLINAYGKARREEEALAVFEEMLDAGVRP--------------THK---------- 307
+SY L+ Y K R + A +F EML GV P T +
Sbjct: 620 ISYDTLLRGYCKTGRIDNAYCLFREMLRKGVTPGAVTYSTILQGLFHTRRFSEAKELYLN 679
Query: 308 -----------AYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASD 356
YNI+L+ + VD+A +F+ + P+I ++T M+
Sbjct: 680 MIKSGQQWDIYTYNIILNGLCKTNCVDEAFKIFQSLCSKDLRPNIITFTIMIDVLFKGGR 739
Query: 357 MEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTT 416
+ A F + G VPNV+TY ++K + L++ ++ M +G P+ +
Sbjct: 740 KKDAMDLFASIPSHGLVPNVVTYCIMMKNIIQEGLLDEFDNLFLAMEKSGCTPDSVMLNA 799
Query: 417 IMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANEL 468
I+ + + A + +++ F + ++L+SL + +N A L
Sbjct: 800 IIRSLLGRGEIMRAGAYLSKIDEMNFSLEASTTSLLISLFSREEYKNHAKSL 851
Score = 138 bits (347), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 92/391 (23%), Positives = 175/391 (44%), Gaps = 6/391 (1%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
LI Y G++ + + L M +G P VV+++ L++ + G+ A IF M G
Sbjct: 345 LIHGYLSTGEWKEVVRRLEEMYARGLDPDVVTYSLLLDYLCKNGKCTEARKIFYCMIRKG 404
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
+P+ Y I+L + + ++ ++ + + P+ +F++++ Y K +
Sbjct: 405 IKPNVTIYGILLHGYAARGAIADLTDLLDLMV---ANGISPNNYIFNIVLCAYAKKAMID 461
Query: 222 KARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSKI---YDQMQRAGLQPDVVSYALLI 278
+A +F+ M++ G+ VTY L+ V ++QM G+ P+ V + L+
Sbjct: 462 EAMHIFSRMSQHGLSPDVVTYGILIDALCKLGRVDDAVLKFNQMINDGVTPNSVVFNSLV 521
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCS 338
R E+A +F EM D GVRP +N ++ G V A+ + M R
Sbjct: 522 YGLCTVDRWEKAEELFFEMWDQGVRPNVVFFNTIMCNLCNEGQVMVAQRLIDSMERVGVR 581
Query: 339 PDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEI 398
P++ SY T++ + A + A + + G P++I+Y TL++GY K ++ +
Sbjct: 582 PNVISYNTLIGGHCLAGRTDEAAQLLDVMVSVGLKPDLISYDTLLRGYCKTGRIDNAYCL 641
Query: 399 YDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKT 458
+ +M G+ P ++TI+ + F A Y M G D NI+L+
Sbjct: 642 FREMLRKGVTPGAVTYSTILQGLFHTRRFSEAKELYLNMIKSGQQWDIYTYNIILNGLCK 701
Query: 459 ADERNEANELLGNFNHPNNEPGINGLSISVD 489
+ +EA ++ + + P I +I +D
Sbjct: 702 TNCVDEAFKIFQSLCSKDLRPNIITFTIMID 732
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 85/345 (24%), Positives = 157/345 (45%), Gaps = 6/345 (1%)
Query: 128 APSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEE 187
P+VV++ +++ + AE + + M G + +TY I+ +A AE
Sbjct: 196 TPNVVTYNTIIDGLCKAQAVDRAEGVLQHMIDKGVKLDVVTYSTIIDGLCKAQAVDRAEG 255
Query: 188 VFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMS 247
V ++D+ +KPD ++ +I KA ++A + M ++GV+ VTYN+++
Sbjct: 256 VLQHMIDK---GVKPDVVTYNTIIDGLCKAQAVDRAEGVLQHMIDKGVKPDVVTYNTIID 312
Query: 248 FETNYKEVSK---IYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRP 304
+ V + + M ++PD+ +Y LI+ Y +E + EEM G+ P
Sbjct: 313 GLCKAQAVDRADGVLQHMIDKDVKPDIQTYNCLIHGYLSTGEWKEVVRRLEEMYARGLDP 372
Query: 305 THKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFF 364
Y++LLD +G +AR +F CM R P++ Y +L Y +
Sbjct: 373 DVVTYSLLLDYLCKNGKCTEARKIFYCMIRKGIKPNVTIYGILLHGYAARGAIADLTDLL 432
Query: 365 RRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKN 424
+ +G PN + ++ YAK +++ M I+ +M +G+ P+ + ++DA K
Sbjct: 433 DLMVANGISPNNYIFNIVLCAYAKKAMIDEAMHIFSRMSQHGLSPDVVTYGILIDALCKL 492
Query: 425 KDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELL 469
D AV+ + +M + G P+ N L+ T D +A EL
Sbjct: 493 GRVDDAVLKFNQMINDGVTPNSVVFNSLVYGLCTVDRWEKAEELF 537
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 89/393 (22%), Positives = 166/393 (42%), Gaps = 4/393 (1%)
Query: 101 MLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNA-EAIFRRMQS 159
+L + + G + K G+ + V L+ R A + + RRM
Sbjct: 95 ILTGCFCRLGRIEHGFAAFGLILKTGWRVNEVVINQLLNGLCDAKRVDEAMDILLRRMPE 154
Query: 160 SGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGG 219
G P+ ++ +LK + +EA E+ T+ ++ P+ ++ +I KA
Sbjct: 155 FGCMPNVVSCNTLLKGLCNEKRVEEALELLHTMAEDGGGNCTPNVVTYNTIIDGLCKAQA 214
Query: 220 YEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSK---IYDQMQRAGLQPDVVSYAL 276
++A + M ++GV+ VTY++++ + V + + M G++PDVV+Y
Sbjct: 215 VDRAEGVLQHMIDKGVKLDVVTYSTIIDGLCKAQAVDRAEGVLQHMIDKGVKPDVVTYNT 274
Query: 277 LINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDR 336
+I+ KA+ + A V + M+D GV+P YN ++D + VD+A V + M
Sbjct: 275 IIDGLCKAQAVDRAEGVLQHMIDKGVKPDVVTYNTIIDGLCKAQAVDRADGVLQHMIDKD 334
Query: 337 CSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMM 396
PDI +Y ++ Y++ + + + + G P+V+TY L+ K +
Sbjct: 335 VKPDIQTYNCLIHGYLSTGEWKEVVRRLEEMYARGLDPDVVTYSLLLDYLCKNGKCTEAR 394
Query: 397 EIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLA 456
+I+ M GIKPN TI+ ++ Y M + G P+ NI+L
Sbjct: 395 KIFYCMIRKGIKPNVTIYGILLHGYAARGAIADLTDLLDLMVANGISPNNYIFNIVLCAY 454
Query: 457 KTADERNEANELLGNFNHPNNEPGINGLSISVD 489
+EA + + P + I +D
Sbjct: 455 AKKAMIDEAMHIFSRMSQHGLSPDVVTYGILID 487
Score = 121 bits (304), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 89/410 (21%), Positives = 175/410 (42%), Gaps = 7/410 (1%)
Query: 75 KWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSH 134
+W V LE + + D + + + +L+ K G +A K+ M +KG P+V +
Sbjct: 354 EWKEVVRRLEEMYARGL-DPDVVTYSLLLDYLCKNGKCTEARKIFYCMIRKGIKPNVTIY 412
Query: 135 TALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLD 194
L+ Y G + + M ++G P+ + I+L + + EA +F +
Sbjct: 413 GILLHGYAARGAIADLTDLLDLMVANGISPNNYIFNIVLCAYAKKAMIDEAMHIFSRM-- 470
Query: 195 EEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSL---MSFETN 251
+ L PD + ++I K G + A F M GV ++V +NSL +
Sbjct: 471 -SQHGLSPDVVTYGILIDALCKLGRVDDAVLKFNQMINDGVTPNSVVFNSLVYGLCTVDR 529
Query: 252 YKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNI 311
+++ +++ +M G++P+VV + ++ + A + + M GVRP +YN
Sbjct: 530 WEKAEELFFEMWDQGVRPNVVFFNTIMCNLCNEGQVMVAQRLIDSMERVGVRPNVISYNT 589
Query: 312 LLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDG 371
L+ ++G D+A + M PD+ SY T+L Y ++ A FR + + G
Sbjct: 590 LIGGHCLAGRTDEAAQLLDVMVSVGLKPDLISYDTLLRGYCKTGRIDNAYCLFREMLRKG 649
Query: 372 FVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAV 431
P +TY T+++G + E+Y M +G + + + I++ K D A
Sbjct: 650 VTPGAVTYSTILQGLFHTRRFSEAKELYLNMIKSGQQWDIYTYNIILNGLCKTNCVDEAF 709
Query: 432 VWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGI 481
++ + S P+ I++ + + +A +L + P +
Sbjct: 710 KIFQSLCSKDLRPNIITFTIMIDVLFKGGRKKDAMDLFASIPSHGLVPNV 759
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 74/314 (23%), Positives = 139/314 (44%), Gaps = 13/314 (4%)
Query: 150 AEAIFRRMQ---SSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKM 206
A ++F RM S+ RP TY I+ F + + F +L K+ + ++ +
Sbjct: 71 AVSLFNRMARACSNKVRPDLCTYSILTGCFCRLGRIEHGFAAFGLIL---KTGWRVNEVV 127
Query: 207 FHMMIYMYKKAGGYEKARK-LFALMAERGVQQSTVTYNSLMSFETNYKEVSKIYDQMQR- 264
+ ++ A ++A L M E G + V+ N+L+ N K V + + +
Sbjct: 128 INQLLNGLCDAKRVDEAMDILLRRMPEFGCMPNVVSCNTLLKGLCNEKRVEEALELLHTM 187
Query: 265 -----AGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAIS 319
P+VV+Y +I+ KA+ + A V + M+D GV+ Y+ ++D +
Sbjct: 188 AEDGGGNCTPNVVTYNTIIDGLCKAQAVDRAEGVLQHMIDKGVKLDVVTYSTIIDGLCKA 247
Query: 320 GMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITY 379
VD+A V + M PD+ +Y T++ A ++ AE + + G P+V+TY
Sbjct: 248 QAVDRAEGVLQHMIDKGVKPDVVTYNTIIDGLCKAQAVDRAEGVLQHMIDKGVKPDVVTY 307
Query: 380 GTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMES 439
T+I G K +++ + M +KP+ + ++ Y ++ V +EM +
Sbjct: 308 NTIIDGLCKAQAVDRADGVLQHMIDKDVKPDIQTYNCLIHGYLSTGEWKEVVRRLEEMYA 367
Query: 440 CGFPPDQKAKNILL 453
G PD ++LL
Sbjct: 368 RGLDPDVVTYSLLL 381
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/129 (24%), Positives = 64/129 (49%), Gaps = 5/129 (3%)
Query: 83 LEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYG 142
L ++ WD + +++ K ++A K+ + K P++++ T +++
Sbjct: 678 LNMIKSGQQWDIYTYN--IILNGLCKTNCVDEAFKIFQSLCSKDLRPNIITFTIMIDVLF 735
Query: 143 RGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKP 202
+GGR K+A +F + S G P+ +TY I++K ++ E + +F+ + EKS P
Sbjct: 736 KGGRKKDAMDLFASIPSHGLVPNVVTYCIMMKNIIQEGLLDEFDNLFLAM---EKSGCTP 792
Query: 203 DQKMFHMMI 211
D M + +I
Sbjct: 793 DSVMLNAII 801
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/188 (22%), Positives = 77/188 (40%), Gaps = 45/188 (23%)
Query: 288 EEALAVFEEMLDAGVRPTHKAYNILLDAFA---ISGMVDQARTVFKCMRR---DRCSPDI 341
++AL +F+E+L + +A+N LL+ A S + A ++F M R ++ PD+
Sbjct: 31 DDALKLFDELLPHARPASVRAFNHLLNVVARARCSSTSELAVSLFNRMARACSNKVRPDL 90
Query: 342 CSYTTMLSAYVNASDM------------------------------------EGAEKFFR 365
C+Y+ + + + E + R
Sbjct: 91 CTYSILTGCFCRLGRIEHGFAAFGLILKTGWRVNEVVINQLLNGLCDAKRVDEAMDILLR 150
Query: 366 RLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNG---IKPNQTIFTTIMDAYG 422
R+ + G +PNV++ TL+KG +E+ +E+ M +G PN + TI+D
Sbjct: 151 RMPEFGCMPNVVSCNTLLKGLCNEKRVEEALELLHTMAEDGGGNCTPNVVTYNTIIDGLC 210
Query: 423 KNKDFDSA 430
K + D A
Sbjct: 211 KAQAVDRA 218
>gi|354726093|emb|CCD31439.1| RNA processing factor 3 [Arabidopsis thaliana]
Length = 629
Score = 162 bits (409), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 113/474 (23%), Positives = 222/474 (46%), Gaps = 45/474 (9%)
Query: 48 LRSERTRGQPLPKDLVLGTLVR-LKQLKKWNVV---SEVLEWLRIQ-SWWDFNEMDFLML 102
L E + +PLP + L+ + ++KK+++V E ++ LRI + +N +L
Sbjct: 67 LFGEMVQSRPLPSIVEFNKLLSAIAKMKKFDLVISLGERMQNLRISYDLYSYN-----IL 121
Query: 103 ITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGP 162
I + ++ A VL M K GY P +V+ ++L+ Y R +A A+ +M G
Sbjct: 122 INCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGY 181
Query: 163 RPSALTYQIILKLFVEANKFKEAEEVF-------------------------------MT 191
+P +T+ ++ NK EA + ++
Sbjct: 182 KPDTVTFNTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGAVVNGLCKRGDIDLALS 241
Query: 192 LLDE-EKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFET 250
LL + EK ++ D +++ +I K + A LF M +G++ TYNSL+S
Sbjct: 242 LLKKMEKGKIEADVVIYNTIIDGLCKYKHIDDAFALFNKMETKGIRPDVFTYNSLISCLC 301
Query: 251 NY---KEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHK 307
NY + S++ M + P+VV+++ LI+A+ K + EA +++EM+ + P
Sbjct: 302 NYGRWSDASRLLSNMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIF 361
Query: 308 AYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRL 367
Y+ L++ F + +D+A+ +F+ M C P++ +Y T++ + A +E + FR +
Sbjct: 362 TYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREM 421
Query: 368 KQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDF 427
Q G V N +TY TLI+G + + + +I+ KM +G+ P+ ++ ++D K
Sbjct: 422 SQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKL 481
Query: 428 DSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGI 481
+ A+V ++ ++ PD NI++ A + + +L + + +P +
Sbjct: 482 EKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNV 535
Score = 151 bits (382), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 91/355 (25%), Positives = 167/355 (47%), Gaps = 6/355 (1%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
++ K+GD + A +L M K VV + +++ + +A A+F +M++ G
Sbjct: 226 VVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHIDDAFALFNKMETKG 285
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
RP TY ++ ++ +A + +++ + + P+ F +I + K G
Sbjct: 286 IRPDVFTYNSLISCLCNYGRWSDASRLLSNMIERK---INPNVVTFSALIDAFVKEGKLV 342
Query: 222 KARKLFALMAERGVQQSTVTYNSLM---SFETNYKEVSKIYDQMQRAGLQPDVVSYALLI 278
+A KL+ M +R + TY+SL+ E +++ M P+VV+Y LI
Sbjct: 343 EAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLI 402
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCS 338
+ KA+R EE + +F EM G+ YN L+ +G D A+ +FK M D
Sbjct: 403 KGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVP 462
Query: 339 PDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEI 398
PDI +Y+ +L +E A F L++ P++ TY +I+G K +E ++
Sbjct: 463 PDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDL 522
Query: 399 YDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILL 453
+ + + G+KPN I+TT++ + + + A ++EM+ G PD N L+
Sbjct: 523 FCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPDSGCYNTLI 577
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 92/357 (25%), Positives = 174/357 (48%), Gaps = 6/357 (1%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
+I K + A + + M KG P V ++ +L+ GR+ +A + M
Sbjct: 261 IIDGLCKYKHIDDAFALFNKMETKGIRPDVFTYNSLISCLCNYGRWSDASRLLSNMIERK 320
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
P+ +T+ ++ FV+ K EAE+++ ++ K + PD + +I + +
Sbjct: 321 INPNVVTFSALIDAFVKEGKLVEAEKLYDEMI---KRSIDPDIFTYSSLINGFCMHDRLD 377
Query: 222 KARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSK---IYDQMQRAGLQPDVVSYALLI 278
+A+ +F LM + + VTYN+L+ K V + ++ +M + GL + V+Y LI
Sbjct: 378 EAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLI 437
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCS 338
+A + A +F++M+ GV P Y+ILLD G +++A VF+ +++ +
Sbjct: 438 QGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKME 497
Query: 339 PDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEI 398
PDI +Y M+ A +E F L G PNVI Y T+I G+ + E+ +
Sbjct: 498 PDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADAL 557
Query: 399 YDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSL 455
+ +M+ +G P+ + T++ A ++ D ++ KEM SCGF D ++++++
Sbjct: 558 FREMKEDGTLPDSGCYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTISMVINM 614
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 94/389 (24%), Positives = 182/389 (46%), Gaps = 44/389 (11%)
Query: 35 MNQIEEVGSAVAVLRSERTRGQPLPKDLVLGTLVR-LKQLKKWNVVSEVLEWLRIQSWWD 93
+ + + + A A+ T+G P +L+ L +W+ S +L + I+ +
Sbjct: 265 LCKYKHIDDAFALFNKMETKGIR-PDVFTYNSLISCLCNYGRWSDASRLLSNM-IERKIN 322
Query: 94 FNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAI 153
N + F LI A+ K+G +AEK+ M K+ P + ++++L+ + R A+ +
Sbjct: 323 PNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHM 382
Query: 154 FRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYM 213
F M S P+ +TY ++K F +A + +E E
Sbjct: 383 FELMISKDCFPNVVTYNTLIKGFCKAKRVEEGME-------------------------- 416
Query: 214 YKKAGGYEKARKLFALMAERGVQQSTVTYNSLMS--FETNYKEVS-KIYDQMQRAGLQPD 270
LF M++RG+ +TVTYN+L+ F+ +++ KI+ +M G+ PD
Sbjct: 417 ------------LFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPD 464
Query: 271 VVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFK 330
+++Y++L++ K + E+AL VFE + + + P YNI+++ +G V+ +F
Sbjct: 465 IITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFC 524
Query: 331 CMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVN 390
+ P++ YTTM+S + E A+ FR +K+DG +P+ Y TLI+ +
Sbjct: 525 SLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPDSGCYNTLIRARLRDG 584
Query: 391 NLEKMMEIYDKMRVNGIKPNQTIFTTIMD 419
+ E+ +MR G + + + +++
Sbjct: 585 DKAASAELIKEMRSCGFVGDASTISMVIN 613
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 75/326 (23%), Positives = 137/326 (42%), Gaps = 10/326 (3%)
Query: 149 NAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKP--DQKM 206
+A +F M S P PS + + +L + KF + L E L+ D
Sbjct: 63 DAIGLFGEMVQSRPLPSIVEFNKLLSAIAKMKKFD-----LVISLGERMQNLRISYDLYS 117
Query: 207 FHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVS---KIYDQMQ 263
++++I + + A + M + G + VT +SL++ + K +S + DQM
Sbjct: 118 YNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMV 177
Query: 264 RAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVD 323
G +PD V++ LI+ + EA+A+ ++M+ G +P Y +++ G +D
Sbjct: 178 EMGYKPDTVTFNTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGAVVNGLCKRGDID 237
Query: 324 QARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLI 383
A ++ K M + + D+ Y T++ ++ A F +++ G P+V TY +LI
Sbjct: 238 LALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHIDDAFALFNKMETKGIRPDVFTYNSLI 297
Query: 384 KGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFP 443
+ M I PN F+ ++DA+ K A Y EM
Sbjct: 298 SCLCNYGRWSDASRLLSNMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSID 357
Query: 444 PDQKAKNILLSLAKTADERNEANELL 469
PD + L++ D +EA +
Sbjct: 358 PDIFTYSSLINGFCMHDRLDEAKHMF 383
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 69/270 (25%), Positives = 119/270 (44%), Gaps = 3/270 (1%)
Query: 223 ARKLFALMAERGVQQSTVTYNSLMSFETNYKE---VSKIYDQMQRAGLQPDVVSYALLIN 279
A LF M + S V +N L+S K+ V + ++MQ + D+ SY +LIN
Sbjct: 64 AIGLFGEMVQSRPLPSIVEFNKLLSAIAKMKKFDLVISLGERMQNLRISYDLYSYNILIN 123
Query: 280 AYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSP 339
+ + + ALAV +M+ G P + LL+ + S + A + M P
Sbjct: 124 CFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKP 183
Query: 340 DICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIY 399
D ++ T++ + A ++ Q G P+++TYG ++ G K +++ + +
Sbjct: 184 DTVTFNTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGAVVNGLCKRGDIDLALSLL 243
Query: 400 DKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTA 459
KM I+ + I+ TI+D K K D A + +ME+ G PD N L+S
Sbjct: 244 KKMEKGKIEADVVIYNTIIDGLCKYKHIDDAFALFNKMETKGIRPDVFTYNSLISCLCNY 303
Query: 460 DERNEANELLGNFNHPNNEPGINGLSISVD 489
++A+ LL N P + S +D
Sbjct: 304 GRWSDASRLLSNMIERKINPNVVTFSALID 333
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 74/158 (46%)
Query: 288 EEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTM 347
++A+ +F EM+ + P+ +N LL A A D ++ + M+ R S D+ SY +
Sbjct: 62 DDAIGLFGEMVQSRPLPSIVEFNKLLSAIAKMKKFDLVISLGERMQNLRISYDLYSYNIL 121
Query: 348 LSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGI 407
++ + S + A ++ + G+ P+++T +L+ GY + + + D+M G
Sbjct: 122 INCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGY 181
Query: 408 KPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPD 445
KP+ F T++ + AV +M G PD
Sbjct: 182 KPDTVTFNTLIHGLFLHNKASEAVALVDQMVQRGCQPD 219
Score = 47.4 bits (111), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 33/158 (20%), Positives = 65/158 (41%)
Query: 322 VDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGT 381
+D A +F M + R P I + +LSA + R++ ++ +Y
Sbjct: 61 LDDAIGLFGEMVQSRPLPSIVEFNKLLSAIAKMKKFDLVISLGERMQNLRISYDLYSYNI 120
Query: 382 LIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCG 441
LI + + + L + + KM G +P+ +++++ Y +K AV +M G
Sbjct: 121 LINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMG 180
Query: 442 FPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEP 479
+ PD N L+ ++ +EA L+ +P
Sbjct: 181 YKPDTVTFNTLIHGLFLHNKASEAVALVDQMVQRGCQP 218
>gi|334183590|ref|NP_176479.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75179661|sp|Q9LQ16.1|PPR94_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g62910
gi|8493578|gb|AAF75801.1|AC011000_4 Contains a RepB PF|01051 protein domain and multiple PPR PF|01535
repeats [Arabidopsis thaliana]
gi|332195899|gb|AEE34020.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 632
Score = 162 bits (409), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 97/357 (27%), Positives = 178/357 (49%), Gaps = 6/357 (1%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
+I K + A + + M+ KG P V ++++L+ GR+ +A + M
Sbjct: 264 IIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERK 323
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
P+ +T+ ++ FV+ K EAE+++ ++ K + PD + +I + +
Sbjct: 324 INPNVVTFSALIDAFVKEGKLVEAEKLYDEMI---KRSIDPDIFTYSSLINGFCMHDRLD 380
Query: 222 KARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSK---IYDQMQRAGLQPDVVSYALLI 278
+A+ +F LM + + VTY++L+ K V + ++ +M + GL + V+Y LI
Sbjct: 381 EAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLI 440
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCS 338
+ + +AR + A VF++M+ GV P YNILLD +G + +A VF+ ++R
Sbjct: 441 HGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTME 500
Query: 339 PDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEI 398
PDI +Y M+ A +E + F L G PNVI Y T+I G+ + + E+ +
Sbjct: 501 PDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSL 560
Query: 399 YDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSL 455
KM+ +G PN + T++ A ++ D +++ KEM SCGF D ++ ++
Sbjct: 561 LKKMKEDGPLPNSGTYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLVTNM 617
Score = 158 bits (399), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 112/487 (22%), Positives = 225/487 (46%), Gaps = 40/487 (8%)
Query: 32 RRLMNQIEEVGSAVAVLRSERTRGQPLPKDLVLGTLVR-LKQLKKWNVVSEVLEWLRIQS 90
R ++ I +V AV L + + +P P + L+ + ++ K+ +V + E ++Q+
Sbjct: 55 RNRLSDIIKVDDAVD-LFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGE--QMQT 111
Query: 91 WWDFNEM-DFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKN 149
+++ + + I + ++ + A VL+ M K GY P +V+ ++L+ Y R +
Sbjct: 112 LGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISD 171
Query: 150 AEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVF-------------------- 189
A A+ +M G +P T+ ++ NK EA +
Sbjct: 172 AVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVN 231
Query: 190 -----------MTLLDE-EKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQ 237
++LL + EK ++ D +++ +I K + A LF M +G++
Sbjct: 232 GLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRP 291
Query: 238 STVTYNSLMSFETNY---KEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVF 294
TY+SL+S NY + S++ M + P+VV+++ LI+A+ K + EA ++
Sbjct: 292 DVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLY 351
Query: 295 EEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNA 354
+EM+ + P Y+ L++ F + +D+A+ +F+ M C P++ +Y+T++ + A
Sbjct: 352 DEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKA 411
Query: 355 SDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIF 414
+E + FR + Q G V N +TY TLI G+ + + + ++ +M G+ PN +
Sbjct: 412 KRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTY 471
Query: 415 TTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNH 474
++D KN A+V ++ ++ PD NI++ A + + EL N +
Sbjct: 472 NILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSL 531
Query: 475 PNNEPGI 481
P +
Sbjct: 532 KGVSPNV 538
Score = 125 bits (315), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 81/363 (22%), Positives = 171/363 (47%), Gaps = 9/363 (2%)
Query: 113 NKAEKVLSF---MNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTY 169
NKA + ++ M ++G P +V++ ++ + G A ++ ++M+ + Y
Sbjct: 202 NKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIY 261
Query: 170 QIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFAL 229
I+ K+K ++ + + ++PD + +I G + A +L +
Sbjct: 262 NTIIDGLC---KYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSD 318
Query: 230 MAERGVQQSTVTYNSLM-SF--ETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARR 286
M ER + + VT+++L+ +F E E K+YD+M + + PD+ +Y+ LIN + R
Sbjct: 319 MIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDR 378
Query: 287 EEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTT 346
+EA +FE M+ P Y+ L+ F + V++ +F+ M + + +YTT
Sbjct: 379 LDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTT 438
Query: 347 MLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNG 406
++ + A D + A+ F+++ G PN++TY L+ G K L K M +++ ++ +
Sbjct: 439 LIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRST 498
Query: 407 IKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEAN 466
++P+ + +++ K + + + G P+ A N ++S + EA+
Sbjct: 499 MEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEAD 558
Query: 467 ELL 469
LL
Sbjct: 559 SLL 561
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 77/309 (24%), Positives = 156/309 (50%), Gaps = 7/309 (2%)
Query: 75 KWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSH 134
+W+ S +L + I+ + N + F LI A+ K+G +AEK+ M K+ P + ++
Sbjct: 308 RWSDASRLLSDM-IERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTY 366
Query: 135 TALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLD 194
++L+ + R A+ +F M S P+ +TY ++K F +A + +E E+F +
Sbjct: 367 SSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREM-- 424
Query: 195 EEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKE 254
+ L + + +I+ + +A + A+ +F M GV + +TYN L+ +
Sbjct: 425 -SQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGK 483
Query: 255 VSK---IYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNI 311
++K +++ +QR+ ++PD+ +Y ++I KA + E+ +F + GV P AYN
Sbjct: 484 LAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNT 543
Query: 312 LLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDG 371
++ F G ++A ++ K M+ D P+ +Y T++ A + D E + + + ++ G
Sbjct: 544 MISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARLRDGDREASAELIKEMRSCG 603
Query: 372 FVPNVITYG 380
F + T G
Sbjct: 604 FAGDASTIG 612
Score = 98.6 bits (244), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 68/270 (25%), Positives = 123/270 (45%), Gaps = 3/270 (1%)
Query: 223 ARKLFALMAERGVQQSTVTYNSLMSFETN---YKEVSKIYDQMQRAGLQPDVVSYALLIN 279
A LF M + S V +N L+S ++ V + +QMQ G+ D+ +Y++ IN
Sbjct: 67 AVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFIN 126
Query: 280 AYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSP 339
+ + + ALAV +M+ G P + LL+ + S + A + M P
Sbjct: 127 CFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKP 186
Query: 340 DICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIY 399
D ++TT++ + A ++ Q G P+++TYGT++ G K +++ + +
Sbjct: 187 DTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLL 246
Query: 400 DKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTA 459
KM I+ + I+ TI+D K K D A+ + EM++ G PD + L+S
Sbjct: 247 KKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNY 306
Query: 460 DERNEANELLGNFNHPNNEPGINGLSISVD 489
++A+ LL + P + S +D
Sbjct: 307 GRWSDASRLLSDMIERKINPNVVTFSALID 336
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 37/170 (21%), Positives = 78/170 (45%)
Query: 276 LLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRD 335
+L N + ++A+ +F +M+ + P+ +N LL A A + ++ + M+
Sbjct: 53 ILRNRLSDIIKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTL 112
Query: 336 RCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKM 395
S D+ +Y+ ++ + S + A ++ + G+ P+++T +L+ GY +
Sbjct: 113 GISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDA 172
Query: 396 MEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPD 445
+ + D+M G KP+ FTT++ + AV +M G PD
Sbjct: 173 VALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPD 222
>gi|357116365|ref|XP_003559952.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g28010-like [Brachypodium distachyon]
Length = 627
Score = 162 bits (409), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 122/467 (26%), Positives = 214/467 (45%), Gaps = 46/467 (9%)
Query: 42 GSAVAVLRSERTRGQPLPKDLVLGTLVRLKQLKKWNVVSEVLEWLR--IQSWWDFNEMDF 99
G AV +LR + G P + GTL+R L V + +E LR +S + N + +
Sbjct: 130 GQAVGLLRDMQASGVR-PDVVTYGTLIR--GLCDAADVDKAVELLREMCESGIEPNVVVY 186
Query: 100 LMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQS 159
L+ Y K G + KV M+ +G P VV +T L+++ R G+ K A + +M
Sbjct: 187 SCLLQGYCKAGRWECVSKVFEEMSGRGIEPDVVMYTGLIDSLCREGKVKKATQVMDKMME 246
Query: 160 SGPRPSALTYQIILKLFVEANKFKEAEEV------------------------------- 188
G P+ +TY +++ + KEA +
Sbjct: 247 RGLEPNVVTYNVLINSMCKEGSVKEAMSLRNNMLEKGVALDAVTYNTLITGLSGVLEMDE 306
Query: 189 FMTLLDEE---KSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSL 245
M LL+E ++ ++P+ F+ +I+ K G +A ++ +MAE G + VT+N L
Sbjct: 307 AMGLLEEMIHGETMVEPNVVTFNSVIHGLCKTGRMRQAFQVRDMMAENGCACNLVTFNLL 366
Query: 246 MSFETNYKEVSK---IYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGV 302
+ +V K + D+M +GL+PD +Y++LIN + K + + A ++ +M G+
Sbjct: 367 IGGLLRVHKVKKAMELMDEMASSGLEPDSFTYSILINGFCKMWQVDRAESLLSKMRRDGI 426
Query: 303 RPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEK 362
P Y LL A GM++QAR F M ++ C D+ +Y+TM+ D + AE+
Sbjct: 427 EPELVHYIPLLAALCEQGMMEQARNFFDEMHKN-CKLDVVAYSTMIHGACRLRDRKSAEE 485
Query: 363 FFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYG 422
F + + +G +P+ +TY LI +A +L + +M +G P+ +F +++ YG
Sbjct: 486 FLKHMLDEGLIPDSVTYSMLINMFANSGDLGAAERVLKQMTASGFVPDVAVFDSLIKGYG 545
Query: 423 KNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELL 469
D + + +EM + D K I+ ++ NE LL
Sbjct: 546 AKGDTEKVLELIREMTAKDIALDSK---IISTIYTCLVANNEGKALL 589
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 90/349 (25%), Positives = 173/349 (49%), Gaps = 8/349 (2%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
++ A +QG A L + P+ VS+T LM A R A + R MQ+SG
Sbjct: 84 VLAALCRQGGCLDAALFLLRVMAHETRPTAVSYTTLMRALCAERRTGQAVGLLRDMQASG 143
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
RP +TY +++ +A +A E+ + + S ++P+ ++ ++ Y KAG +E
Sbjct: 144 VRPDVVTYGTLIRGLCDAADVDKAVELLREMCE---SGIEPNVVVYSCLLQGYCKAGRWE 200
Query: 222 KARKLFALMAERGVQQSTVTYNSL---MSFETNYKEVSKIYDQMQRAGLQPDVVSYALLI 278
K+F M+ RG++ V Y L + E K+ +++ D+M GL+P+VV+Y +LI
Sbjct: 201 CVSKVFEEMSGRGIEPDVVMYTGLIDSLCREGKVKKATQVMDKMMERGLEPNVVTYNVLI 260
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDR-- 336
N+ K +EA+++ ML+ GV YN L+ + +D+A + + M
Sbjct: 261 NSMCKEGSVKEAMSLRNNMLEKGVALDAVTYNTLITGLSGVLEMDEAMGLLEEMIHGETM 320
Query: 337 CSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMM 396
P++ ++ +++ M A + + ++G N++T+ LI G +V+ ++K M
Sbjct: 321 VEPNVVTFNSVIHGLCKTGRMRQAFQVRDMMAENGCACNLVTFNLLIGGLLRVHKVKKAM 380
Query: 397 EIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPD 445
E+ D+M +G++P+ ++ +++ + K D A +M G P+
Sbjct: 381 ELMDEMASSGLEPDSFTYSILINGFCKMWQVDRAESLLSKMRRDGIEPE 429
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 89/207 (42%)
Query: 268 QPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQART 327
+P VSY L+ A RR +A+ + +M +GVRP Y L+ + VD+A
Sbjct: 110 RPTAVSYTTLMRALCAERRTGQAVGLLRDMQASGVRPDVVTYGTLIRGLCDAADVDKAVE 169
Query: 328 VFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYA 387
+ + M P++ Y+ +L Y A E K F + G P+V+ Y LI
Sbjct: 170 LLREMCESGIEPNVVVYSCLLQGYCKAGRWECVSKVFEEMSGRGIEPDVVMYTGLIDSLC 229
Query: 388 KVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQK 447
+ ++K ++ DKM G++PN + ++++ K A+ M G D
Sbjct: 230 REGKVKKATQVMDKMMERGLEPNVVTYNVLINSMCKEGSVKEAMSLRNNMLEKGVALDAV 289
Query: 448 AKNILLSLAKTADERNEANELLGNFNH 474
N L++ E +EA LL H
Sbjct: 290 TYNTLITGLSGVLEMDEAMGLLEEMIH 316
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/141 (23%), Positives = 57/141 (40%), Gaps = 35/141 (24%)
Query: 340 DICSYTTMLSAYVNASDMEGAEKFFRR--------------------------------- 366
D SY T+L+A A F R
Sbjct: 77 DAVSYNTVLAALCRQGGCLDAALFLLRVMAHETRPTAVSYTTLMRALCAERRTGQAVGLL 136
Query: 367 --LKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKN 424
++ G P+V+TYGTLI+G +++K +E+ +M +GI+PN +++ ++ Y K
Sbjct: 137 RDMQASGVRPDVVTYGTLIRGLCDAADVDKAVELLREMCESGIEPNVVVYSCLLQGYCKA 196
Query: 425 KDFDSAVVWYKEMESCGFPPD 445
++ ++EM G PD
Sbjct: 197 GRWECVSKVFEEMSGRGIEPD 217
>gi|356518398|ref|XP_003527866.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Glycine max]
Length = 603
Score = 162 bits (409), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 112/414 (27%), Positives = 178/414 (42%), Gaps = 40/414 (9%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
LI + + G KA +++ + G P V+++ L+ Y + G A + RM +
Sbjct: 148 LIRGFCRSGKTRKATRIMEILENSGAVPDVITYNVLIGGYCKSGEIDKALQVLERMSVA- 206
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVF-------------------------------M 190
P +TY IL+ ++ K KEA EV M
Sbjct: 207 --PDVVTYNTILRSLCDSGKLKEAMEVLDRQMQRECYPDVITYTILIEATCNDSGVGQAM 264
Query: 191 TLLDE-EKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSL---M 246
LLDE K KPD ++++I K G ++A K M G Q + +T+N + M
Sbjct: 265 KLLDEMRKKGCKPDVVTYNVLINGICKEGRLDEAIKFLNNMPLYGCQPNVITHNIILRSM 324
Query: 247 SFETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTH 306
+ + ++ M R G P VV++ +LIN + R A+ V E+M G P
Sbjct: 325 CSTGRWMDAERLLADMLRKGCSPSVVTFNILINFLCRKRLLGRAIDVLEKMPKHGCMPNS 384
Query: 307 KAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRR 366
+YN LL F +D+A + M C PDI +Y T+L+A + A + +
Sbjct: 385 LSYNPLLHGFCQEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKADAAVEILNQ 444
Query: 367 LKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKD 426
L G P +ITY T+I G KV E E+ ++MR G+KP+ ++T++ G
Sbjct: 445 LSSKGCSPVLITYNTVIDGLTKVGKTEYAAELLEEMRRKGLKPDIITYSTLLRGLGCEGK 504
Query: 427 FDSAVVWYKEMESCGFPPDQKAKN-ILLSLAKTADERNEANELLGNFNHPNNEP 479
D A+ + +ME P N I+L L K A + + A + L +P
Sbjct: 505 VDEAIKIFHDMEGLSIKPSAVTYNAIMLGLCK-AQQTSRAIDFLAYMVEKGCKP 557
Score = 138 bits (347), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 93/407 (22%), Positives = 185/407 (45%), Gaps = 11/407 (2%)
Query: 108 KQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSAL 167
+ G+ + K L M +G P V++ T+L+ + R G+ + A I +++SG P +
Sbjct: 119 RNGELEEGLKFLERMIYQGDIPDVIACTSLIRGFCRSGKTRKATRIMEILENSGAVPDVI 178
Query: 168 TYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLF 227
TY +++ + ++ + +A +V E+ + PD ++ ++ +G ++A ++
Sbjct: 179 TYNVLIGGYCKSGEIDKALQVL------ERMSVAPDVVTYNTILRSLCDSGKLKEAMEVL 232
Query: 228 ALMAERGVQQSTVTYNSLMSFETNYKEVS---KIYDQMQRAGLQPDVVSYALLINAYGKA 284
+R +TY L+ N V K+ D+M++ G +PDVV+Y +LIN K
Sbjct: 233 DRQMQRECYPDVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYNVLINGICKE 292
Query: 285 RREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSY 344
R +EA+ M G +P +NI+L + +G A + M R CSP + ++
Sbjct: 293 GRLDEAIKFLNNMPLYGCQPNVITHNIILRSMCSTGRWMDAERLLADMLRKGCSPSVVTF 352
Query: 345 TTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRV 404
+++ + A ++ + G +PN ++Y L+ G+ + +++ +E + M
Sbjct: 353 NILINFLCRKRLLGRAIDVLEKMPKHGCMPNSLSYNPLLHGFCQEKKMDRAIEYLEIMVS 412
Query: 405 NGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNE 464
G P+ + T++ A K+ D+AV ++ S G P N ++ +
Sbjct: 413 RGCYPDIVTYNTLLTALCKDGKADAAVEILNQLSSKGCSPVLITYNTVIDGLTKVGKTEY 472
Query: 465 ANELLGNFNHPNNEPGINGLSISVDEEDDDDDDDEDDDDNIYHDGDG 511
A ELL +P I ++ S + D+ I+HD +G
Sbjct: 473 AAELLEEMRRKGLKPDI--ITYSTLLRGLGCEGKVDEAIKIFHDMEG 517
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 82/356 (23%), Positives = 159/356 (44%), Gaps = 8/356 (2%)
Query: 70 LKQLKKWNVVSEVLEWL--RIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGY 127
L+ L + E +E L ++Q + + + +LI A +A K+L M KKG
Sbjct: 216 LRSLCDSGKLKEAMEVLDRQMQRECYPDVITYTILIEATCNDSGVGQAMKLLDEMRKKGC 275
Query: 128 APSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEE 187
P VV++ L+ + GR A M G +P+ +T+ IIL+ ++ +AE
Sbjct: 276 KPDVVTYNVLINGICKEGRLDEAIKFLNNMPLYGCQPNVITHNIILRSMCSTGRWMDAER 335
Query: 188 VFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMS 247
+ +L + SP F+++I + +A + M + G ++++YN L+
Sbjct: 336 LLADMLRKGCSP---SVVTFNILINFLCRKRLLGRAIDVLEKMPKHGCMPNSLSYNPLLH 392
Query: 248 FETNYKEVSKIYDQMQ---RAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRP 304
K++ + + ++ G PD+V+Y L+ A K + + A+ + ++ G P
Sbjct: 393 GFCQEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKADAAVEILNQLSSKGCSP 452
Query: 305 THKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFF 364
YN ++D G + A + + MRR PDI +Y+T+L ++ A K F
Sbjct: 453 VLITYNTVIDGLTKVGKTEYAAELLEEMRRKGLKPDIITYSTLLRGLGCEGKVDEAIKIF 512
Query: 365 RRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDA 420
++ P+ +TY ++ G K + ++ M G KP + +T +++
Sbjct: 513 HDMEGLSIKPSAVTYNAIMLGLCKAQQTSRAIDFLAYMVEKGCKPTKATYTILIEG 568
Score = 47.4 bits (111), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 30/122 (24%), Positives = 54/122 (44%), Gaps = 3/122 (2%)
Query: 348 LSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGI 407
L V ++E KF R+ G +P+VI +LI+G+ + K I + + +G
Sbjct: 114 LRKLVRNGELEEGLKFLERMIYQGDIPDVIACTSLIRGFCRSGKTRKATRIMEILENSGA 173
Query: 408 KPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANE 467
P+ + ++ Y K+ + D A+ + M PD N +L + + EA E
Sbjct: 174 VPDVITYNVLIGGYCKSGEIDKALQVLERMS---VAPDVVTYNTILRSLCDSGKLKEAME 230
Query: 468 LL 469
+L
Sbjct: 231 VL 232
>gi|356503440|ref|XP_003520516.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g41720-like [Glycine max]
Length = 832
Score = 161 bits (408), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 95/374 (25%), Positives = 177/374 (47%), Gaps = 18/374 (4%)
Query: 87 RIQSW-WDFNEMDFLM-------------LITAYGKQGDFNKAEKVLSFMNKKGYAPSVV 132
R W W N MD ++ LI A G G++ +A V M + G P +V
Sbjct: 198 RAGQWRWAMNIMDDMLRAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTENGVGPDLV 257
Query: 133 SHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTL 192
+H ++ A+ G +Y A + F M+ + RP T I++ V+ ++ +A E+F ++
Sbjct: 258 THNIILSAFKSGAQYSKALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKAIEIFNSM 317
Query: 193 LDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNY 252
E+KS PD F +I++Y G E F +M G++ + V+YN+L+
Sbjct: 318 -REKKSECTPDVVTFTSIIHLYSVCGQVENCEAAFNMMIAEGLKPNIVSYNALIGAYAAR 376
Query: 253 ---KEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAY 309
E ++++++ G +PD+VSY L+NAYG++++ +A +F+ M ++P +Y
Sbjct: 377 GMDNEAHLFFNEIKQNGFRPDIVSYTSLLNAYGRSQKPHKARQIFDRMKRNKLKPNLVSY 436
Query: 310 NILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQ 369
N L+DA+ +G++ A + + M ++ P++ S T+L+A S + +
Sbjct: 437 NALIDAYGSNGLLADAIKILREMEQEGIQPNVVSICTLLAACGRCSRKVKIDTVLTAAEM 496
Query: 370 DGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDS 429
G N + Y I V +K + +Y MR IK + +T ++ K +
Sbjct: 497 RGIKLNTVAYNAAIGSCMNVGEYDKAIGLYKSMRKKKIKTDSVTYTVLISGCCKMSKYGE 556
Query: 430 AVVWYKEMESCGFP 443
A+ + +E+ P
Sbjct: 557 ALSFMEEIMHLKLP 570
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 91/350 (26%), Positives = 170/350 (48%), Gaps = 8/350 (2%)
Query: 79 VSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALM 138
+ V WL+ Q + + M+I + + ++A + M + P V ++ A++
Sbjct: 134 CNRVFRWLKNQKNYRARNDIYNMMIRLHARHNRTDQARGLFFEMQEWRCKPDVETYNAII 193
Query: 139 EAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKS 198
A+GR G+++ A I M + PS TY ++ + +KEA V + + +
Sbjct: 194 NAHGRAGQWRWAMNIMDDMLRAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTE---N 250
Query: 199 PLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSK- 257
+ PD ++++ +K Y KA F LM ++ T T N ++ ++ K
Sbjct: 251 GVGPDLVTHNIILSAFKSGAQYSKALSYFELMKGTHIRPDTTTLNIVIHCLVKLRQYDKA 310
Query: 258 --IYDQM--QRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILL 313
I++ M +++ PDVV++ +I+ Y + E A F M+ G++P +YN L+
Sbjct: 311 IEIFNSMREKKSECTPDVVTFTSIIHLYSVCGQVENCEAAFNMMIAEGLKPNIVSYNALI 370
Query: 314 DAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFV 373
A+A GM ++A F ++++ PDI SYT++L+AY + A + F R+K++
Sbjct: 371 GAYAARGMDNEAHLFFNEIKQNGFRPDIVSYTSLLNAYGRSQKPHKARQIFDRMKRNKLK 430
Query: 374 PNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGK 423
PN+++Y LI Y L ++I +M GI+PN T++ A G+
Sbjct: 431 PNLVSYNALIDAYGSNGLLADAIKILREMEQEGIQPNVVSICTLLAACGR 480
Score = 132 bits (331), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 85/374 (22%), Positives = 171/374 (45%), Gaps = 44/374 (11%)
Query: 137 LMEAYGRGGRYKNAEAIFRRMQSS-GPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDE 195
L++ + G ++ +FR +++ R Y ++++L N+ +A +F +
Sbjct: 121 LIKELTQRGSIEHCNRVFRWLKNQKNYRARNDIYNMMIRLHARHNRTDQARGLFFEM--- 177
Query: 196 EKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSF---ETNY 252
++ KPD + ++ +I + +AG + A + M + S TYN+L++ N+
Sbjct: 178 QEWRCKPDVETYNAIINAHGRAGQWRWAMNIMDDMLRAAIPPSRSTYNNLINACGSSGNW 237
Query: 253 KEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNIL 312
KE + +M G+ PD+V++ ++++A+ + +AL+ FE M +RP NI+
Sbjct: 238 KEALNVCKKMTENGVGPDLVTHNIILSAFKSGAQYSKALSYFELMKGTHIRPDTTTLNIV 297
Query: 313 LDAFAISGMVDQARTVFKCMR--RDRCSPDICSYTTMLSAYVNASDMEGAEK-------- 362
+ D+A +F MR + C+PD+ ++T+++ Y +E E
Sbjct: 298 IHCLVKLRQYDKAIEIFNSMREKKSECTPDVVTFTSIIHLYSVCGQVENCEAAFNMMIAE 357
Query: 363 ---------------------------FFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKM 395
FF +KQ+GF P++++Y +L+ Y + K
Sbjct: 358 GLKPNIVSYNALIGAYAARGMDNEAHLFFNEIKQNGFRPDIVSYTSLLNAYGRSQKPHKA 417
Query: 396 MEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSL 455
+I+D+M+ N +KPN + ++DAYG N A+ +EME G P+ + LL+
Sbjct: 418 RQIFDRMKRNKLKPNLVSYNALIDAYGSNGLLADAIKILREMEQEGIQPNVVSICTLLAA 477
Query: 456 AKTADERNEANELL 469
+ + + +L
Sbjct: 478 CGRCSRKVKIDTVL 491
Score = 131 bits (330), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 86/347 (24%), Positives = 169/347 (48%), Gaps = 6/347 (1%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + + LI AY +G N+A + + + G+ P +VS+T+L+ AYGR + A IF
Sbjct: 362 NIVSYNALIGAYAARGMDNEAHLFFNEIKQNGFRPDIVSYTSLLNAYGRSQKPHKARQIF 421
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
RM+ + +P+ ++Y ++ + +A ++ L + E+ ++P+ ++
Sbjct: 422 DRMKRNKLKPNLVSYNALIDAYGSNGLLADAIKI---LREMEQEGIQPNVVSICTLLAAC 478
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSK---IYDQMQRAGLQPDV 271
+ K + RG++ +TV YN+ + N E K +Y M++ ++ D
Sbjct: 479 GRCSRKVKIDTVLTAAEMRGIKLNTVAYNAAIGSCMNVGEYDKAIGLYKSMRKKKIKTDS 538
Query: 272 VSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKC 331
V+Y +LI+ K + EAL+ EE++ + + + Y+ + A++ G + +A + F
Sbjct: 539 VTYTVLISGCCKMSKYGEALSFMEEIMHLKLPLSKEVYSSAICAYSKQGQIVEAESTFNL 598
Query: 332 MRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNN 391
M+ C PD+ +YT ML AY A + E A F ++ + I L++ + K
Sbjct: 599 MKSSGCYPDVVTYTAMLDAYNAAENWEKAYALFEEMEASSIKLDTIACAALMRSFNKGGQ 658
Query: 392 LEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEME 438
+++ + + MR I + TIF ++ A +D+ +AV K +E
Sbjct: 659 PGRVLSLAESMREKEIPFSDTIFFEMVSACSILQDWRTAVDMIKYIE 705
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 76/326 (23%), Positives = 150/326 (46%), Gaps = 7/326 (2%)
Query: 169 YQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFA 228
+ ++K + + VF L +++ + D +++MMI ++ + ++AR LF
Sbjct: 118 FPFLIKELTQRGSIEHCNRVFRWLKNQKNYRARND--IYNMMIRLHARHNRTDQARGLFF 175
Query: 229 LMAERGVQQSTVTYNSLMSFET---NYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKAR 285
M E + TYN++++ ++ I D M RA + P +Y LINA G +
Sbjct: 176 EMQEWRCKPDVETYNAIINAHGRAGQWRWAMNIMDDMLRAAIPPSRSTYNNLINACGSSG 235
Query: 286 REEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYT 345
+EAL V ++M + GV P +NI+L AF +A + F+ M+ PD +
Sbjct: 236 NWKEALNVCKKMTENGVGPDLVTHNIILSAFKSGAQYSKALSYFELMKGTHIRPDTTTLN 295
Query: 346 TMLSAYVNASDMEGAEKFFR--RLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMR 403
++ V + A + F R K+ P+V+T+ ++I Y+ +E ++ M
Sbjct: 296 IVIHCLVKLRQYDKAIEIFNSMREKKSECTPDVVTFTSIIHLYSVCGQVENCEAAFNMMI 355
Query: 404 VNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERN 463
G+KPN + ++ AY + A +++ E++ GF PD + LL+ + + +
Sbjct: 356 AEGLKPNIVSYNALIGAYAARGMDNEAHLFFNEIKQNGFRPDIVSYTSLLNAYGRSQKPH 415
Query: 464 EANELLGNFNHPNNEPGINGLSISVD 489
+A ++ +P + + +D
Sbjct: 416 KARQIFDRMKRNKLKPNLVSYNALID 441
Score = 95.5 bits (236), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 67/284 (23%), Positives = 126/284 (44%), Gaps = 6/284 (2%)
Query: 204 QKMFHMMIYMYKKAGGYEKARKLFA-LMAERGVQQSTVTYNSLMSFETNYKEVSK---IY 259
+K F +I + G E ++F L ++ + YN ++ + + ++
Sbjct: 115 RKNFPFLIKELTQRGSIEHCNRVFRWLKNQKNYRARNDIYNMMIRLHARHNRTDQARGLF 174
Query: 260 DQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAIS 319
+MQ +PDV +Y +INA+G+A + A+ + ++ML A + P+ YN L++A S
Sbjct: 175 FEMQEWRCKPDVETYNAIINAHGRAGQWRWAMNIMDDMLRAAIPPSRSTYNNLINACGSS 234
Query: 320 GMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITY 379
G +A V K M + PD+ ++ +LSA+ + + A +F +K P+ T
Sbjct: 235 GNWKEALNVCKKMTENGVGPDLVTHNIILSAFKSGAQYSKALSYFELMKGTHIRPDTTTL 294
Query: 380 GTLIKGYAKVNNLEKMMEIYDKMR--VNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEM 437
+I K+ +K +EI++ MR + P+ FT+I+ Y ++ + M
Sbjct: 295 NIVIHCLVKLRQYDKAIEIFNSMREKKSECTPDVVTFTSIIHLYSVCGQVENCEAAFNMM 354
Query: 438 ESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGI 481
+ G P+ + N L+ NEA+ P I
Sbjct: 355 IAEGLKPNIVSYNALIGAYAARGMDNEAHLFFNEIKQNGFRPDI 398
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 86/394 (21%), Positives = 155/394 (39%), Gaps = 76/394 (19%)
Query: 97 MDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRR 156
+ + L+ AYG+ +KA ++ M + P++VS+ AL++AYG G +A I R
Sbjct: 399 VSYTSLLNAYGRSQKPHKARQIFDRMKRNKLKPNLVSYNALIDAYGSNGLLADAIKILRE 458
Query: 157 MQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKK 216
M+ G +P+ ++ I L + ++ L E +K + ++ I
Sbjct: 459 MEQEGIQPNVVS---ICTLLAACGRCSRKVKIDTVLTAAEMRGIKLNTVAYNAAIGSCMN 515
Query: 217 AGGYEKARKLFALMAERGVQQSTVTYNSLMSF---------------------------- 248
G Y+KA L+ M ++ ++ +VTY L+S
Sbjct: 516 VGEYDKAIGLYKSMRKKKIKTDSVTYTVLISGCCKMSKYGEALSFMEEIMHLKLPLSKEV 575
Query: 249 ----------ETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEML 298
+ E ++ M+ +G PDVV+Y +++AY A E+A A+FEEM
Sbjct: 576 YSSAICAYSKQGQIVEAESTFNLMKSSGCYPDVVTYTAMLDAYNAAENWEKAYALFEEME 635
Query: 299 DAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRR------DRCSPDICSYTTMLSAYV 352
+ ++ A L+ +F G + ++ + MR D ++ S ++L +
Sbjct: 636 ASSIKLDTIACAALMRSFNKGGQPGRVLSLAESMREKEIPFSDTIFFEMVSACSILQDWR 695
Query: 353 NASDM-----------------------------EGAEKFFRRLKQDGFVPNVITYGTLI 383
A DM E K F ++ G N+ TY L+
Sbjct: 696 TAVDMIKYIEPSLPVISSGCLNQFLHSLGKSGKIETMLKLFFKMLASGADVNLNTYSILL 755
Query: 384 KGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTI 417
K N K +E+ M GI P++ ++ I
Sbjct: 756 KNLLSSGNWRKYLEVLQWMEDAGIHPSKEMYHDI 789
Score = 40.4 bits (93), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 30/140 (21%), Positives = 65/140 (46%), Gaps = 7/140 (5%)
Query: 94 FNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAI 153
F++ F +++A D+ A ++ ++ S + + G+ G+ + +
Sbjct: 676 FSDTIFFEMVSACSILQDWRTAVDMIKYIEPSLPVISSGCLNQFLHSLGKSGKIETMLKL 735
Query: 154 FRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYM 213
F +M +SG + TY I+LK + + +++ EV + E + + P ++M+H +
Sbjct: 736 FFKMLASGADVNLNTYSILLKNLLSSGNWRKYLEVLQWM---EDAGIHPSKEMYHDISSF 792
Query: 214 YKKAGGYEKARKLFALMAER 233
+K G E A A++ ER
Sbjct: 793 SQKCCGNENA----AVIRER 808
>gi|297849642|ref|XP_002892702.1| hypothetical protein ARALYDRAFT_471420 [Arabidopsis lyrata subsp.
lyrata]
gi|297338544|gb|EFH68961.1| hypothetical protein ARALYDRAFT_471420 [Arabidopsis lyrata subsp.
lyrata]
Length = 667
Score = 161 bits (408), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 102/425 (24%), Positives = 198/425 (46%), Gaps = 50/425 (11%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + + ++ K GD + A +L M+++ V +++ ++++ R G A ++F
Sbjct: 169 NVVTYNSIVNGICKSGDTSLALDLLRKMDERNVKADVFTYSTIIDSLCRDGCIDAAISLF 228
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
+ M++ G + S +TY ++ +A K+ + ++ L D + P+ F+++I ++
Sbjct: 229 KEMETKGIKSSLVTYNSLVGGLCKAGKWNDGVQL---LKDMTSRKIIPNVITFNVLIDVF 285
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSLM---SFETNYKEVSKIYDQMQRAGLQPDV 271
K G ++A +L+ M +G+ +T+TYNSLM + E + + D M R PD+
Sbjct: 286 VKEGKLQEANELYKEMITKGISPNTITYNSLMDGYCMQNRLSEANNMLDLMVRNNCSPDI 345
Query: 272 VSYALLINAYGKARREEEALAVF-----------------------------------EE 296
V++ LI Y K +R +E + +F +E
Sbjct: 346 VTFTSLIKGYCKVKRVDEGMKLFRKISKRGLVANTVTYSILVQGFCQSGKLEIAEELFQE 405
Query: 297 MLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASD 356
M+ GV P Y ILLD +G +++A +F+ +++ + + DI YT ++
Sbjct: 406 MVSLGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMNLDIVMYTIIIEGMCKGGK 465
Query: 357 MEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTT 416
+E A F L G PNV+TY +I G K +L + + KM +G +PN + T
Sbjct: 466 VEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNEPNDCTYNT 525
Query: 417 IMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPN 476
++ A+ ++ D ++ +EM+SCGF D + +++ + +A + F P
Sbjct: 526 LIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDMLSSA---------VWWFKEPR 576
Query: 477 NEPGI 481
PG+
Sbjct: 577 RSPGV 581
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 77/377 (20%), Positives = 163/377 (43%), Gaps = 35/377 (9%)
Query: 97 MDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRR 156
+DF + FN M G A ++ + ++ + R + A ++ +
Sbjct: 66 VDFSRFFSGVASTKQFNLVLDFCKKMELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGK 125
Query: 157 MQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSP----------------- 199
+ G P T+ ++ +K EA + +++ P
Sbjct: 126 VMKLGYEPDTTTFNTLINGLCLESKVSEAVVLVARMVENGCQPNVVTYNSIVNGICKSGD 185
Query: 200 ---------------LKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNS 244
+K D + +I + G + A LF M +G++ S VTYNS
Sbjct: 186 TSLALDLLRKMDERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSLVTYNS 245
Query: 245 L---MSFETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAG 301
L + + + ++ M + P+V+++ +LI+ + K + +EA +++EM+ G
Sbjct: 246 LVGGLCKAGKWNDGVQLLKDMTSRKIIPNVITFNVLIDVFVKEGKLQEANELYKEMITKG 305
Query: 302 VRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAE 361
+ P YN L+D + + + +A + M R+ CSPDI ++T+++ Y ++
Sbjct: 306 ISPNTITYNSLMDGYCMQNRLSEANNMLDLMVRNNCSPDIVTFTSLIKGYCKVKRVDEGM 365
Query: 362 KFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAY 421
K FR++ + G V N +TY L++G+ + LE E++ +M G+ P+ + ++D
Sbjct: 366 KLFRKISKRGLVANTVTYSILVQGFCQSGKLEIAEELFQEMVSLGVLPDVMTYGILLDGL 425
Query: 422 GKNKDFDSAVVWYKEME 438
N + A+ +++++
Sbjct: 426 CDNGKLEKALEIFEDLQ 442
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 73/328 (22%), Positives = 146/328 (44%), Gaps = 6/328 (1%)
Query: 129 PSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEV 188
PS+V + ++ ++M+ +G + T I++ F K A V
Sbjct: 63 PSLVDFSRFFSGVASTKQFNLVLDFCKKMELNGIAHNIYTLNIMINCFCRCCKTCFAYSV 122
Query: 189 FMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSF 248
++ K +PD F+ +I +A L A M E G Q + VTYNS+++
Sbjct: 123 LGKVM---KLGYEPDTTTFNTLINGLCLESKVSEAVVLVARMVENGCQPNVVTYNSIVNG 179
Query: 249 ETNYKEVSKIYD---QMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPT 305
+ S D +M ++ DV +Y+ +I++ + + A+++F+EM G++ +
Sbjct: 180 ICKSGDTSLALDLLRKMDERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSS 239
Query: 306 HKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFR 365
YN L+ +G + + K M + P++ ++ ++ +V ++ A + ++
Sbjct: 240 LVTYNSLVGGLCKAGKWNDGVQLLKDMTSRKIIPNVITFNVLIDVFVKEGKLQEANELYK 299
Query: 366 RLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNK 425
+ G PN ITY +L+ GY N L + + D M N P+ FT+++ Y K K
Sbjct: 300 EMITKGISPNTITYNSLMDGYCMQNRLSEANNMLDLMVRNNCSPDIVTFTSLIKGYCKVK 359
Query: 426 DFDSAVVWYKEMESCGFPPDQKAKNILL 453
D + ++++ G + +IL+
Sbjct: 360 RVDEGMKLFRKISKRGLVANTVTYSILV 387
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 62/272 (22%), Positives = 119/272 (43%), Gaps = 6/272 (2%)
Query: 153 IFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIY 212
+F+ M S P PS + + + F K+ V E + + + ++MI
Sbjct: 52 LFQEMIRSRPLPSLVDFS---RFFSGVASTKQFNLVLDFCKKMELNGIAHNIYTLNIMIN 108
Query: 213 MYKKAGGYEKARKLFALMAERGVQQSTVTYNSL---MSFETNYKEVSKIYDQMQRAGLQP 269
+ + A + + + G + T T+N+L + E+ E + +M G QP
Sbjct: 109 CFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLINGLCLESKVSEAVVLVARMVENGCQP 168
Query: 270 DVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVF 329
+VV+Y ++N K+ AL + +M + V+ Y+ ++D+ G +D A ++F
Sbjct: 169 NVVTYNSIVNGICKSGDTSLALDLLRKMDERNVKADVFTYSTIIDSLCRDGCIDAAISLF 228
Query: 330 KCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKV 389
K M + +Y +++ A + + + +PNVIT+ LI + K
Sbjct: 229 KEMETKGIKSSLVTYNSLVGGLCKAGKWNDGVQLLKDMTSRKIIPNVITFNVLIDVFVKE 288
Query: 390 NNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAY 421
L++ E+Y +M GI PN + ++MD Y
Sbjct: 289 GKLQEANELYKEMITKGISPNTITYNSLMDGY 320
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 56/255 (21%), Positives = 107/255 (41%), Gaps = 3/255 (1%)
Query: 230 MAERGVQQSTVTYNSLMSFETNYKEVSKIYD---QMQRAGLQPDVVSYALLINAYGKARR 286
M G+ + T N +++ + Y ++ + G +PD ++ LIN +
Sbjct: 91 MELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLINGLCLESK 150
Query: 287 EEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTT 346
EA+ + M++ G +P YN +++ SG A + + M D+ +Y+T
Sbjct: 151 VSEAVVLVARMVENGCQPNVVTYNSIVNGICKSGDTSLALDLLRKMDERNVKADVFTYST 210
Query: 347 MLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNG 406
++ + ++ A F+ ++ G +++TY +L+ G K +++ M
Sbjct: 211 IIDSLCRDGCIDAAISLFKEMETKGIKSSLVTYNSLVGGLCKAGKWNDGVQLLKDMTSRK 270
Query: 407 IKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEAN 466
I PN F ++D + K A YKEM + G P+ N L+ + +EAN
Sbjct: 271 IIPNVITFNVLIDVFVKEGKLQEANELYKEMITKGISPNTITYNSLMDGYCMQNRLSEAN 330
Query: 467 ELLGNFNHPNNEPGI 481
+L N P I
Sbjct: 331 NMLDLMVRNNCSPDI 345
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 50/249 (20%), Positives = 111/249 (44%), Gaps = 3/249 (1%)
Query: 223 ARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSKIYD---QMQRAGLQPDVVSYALLIN 279
A LF M S V ++ S + K+ + + D +M+ G+ ++ + ++IN
Sbjct: 49 AIDLFQEMIRSRPLPSLVDFSRFFSGVASTKQFNLVLDFCKKMELNGIAHNIYTLNIMIN 108
Query: 280 AYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSP 339
+ + + A +V +++ G P +N L++ + V +A + M + C P
Sbjct: 109 CFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLINGLCLESKVSEAVVLVARMVENGCQP 168
Query: 340 DICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIY 399
++ +Y ++++ + D A R++ + +V TY T+I + ++ + ++
Sbjct: 169 NVVTYNSIVNGICKSGDTSLALDLLRKMDERNVKADVFTYSTIIDSLCRDGCIDAAISLF 228
Query: 400 DKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTA 459
+M GIK + + +++ K ++ V K+M S P+ N+L+ +
Sbjct: 229 KEMETKGIKSSLVTYNSLVGGLCKAGKWNDGVQLLKDMTSRKIIPNVITFNVLIDVFVKE 288
Query: 460 DERNEANEL 468
+ EANEL
Sbjct: 289 GKLQEANEL 297
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 47/232 (20%), Positives = 104/232 (44%)
Query: 258 IYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFA 317
++ +M R+ P +V ++ + ++ L ++M G+ NI+++ F
Sbjct: 52 LFQEMIRSRPLPSLVDFSRFFSGVASTKQFNLVLDFCKKMELNGIAHNIYTLNIMINCFC 111
Query: 318 ISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVI 377
A +V + + PD ++ T+++ S + A R+ ++G PNV+
Sbjct: 112 RCCKTCFAYSVLGKVMKLGYEPDTTTFNTLINGLCLESKVSEAVVLVARMVENGCQPNVV 171
Query: 378 TYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEM 437
TY +++ G K + +++ KM +K + ++TI+D+ ++ D+A+ +KEM
Sbjct: 172 TYNSIVNGICKSGDTSLALDLLRKMDERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEM 231
Query: 438 ESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGINGLSISVD 489
E+ G N L+ A + N+ +LL + P + ++ +D
Sbjct: 232 ETKGIKSSLVTYNSLVGGLCKAGKWNDGVQLLKDMTSRKIIPNVITFNVLID 283
Score = 41.6 bits (96), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 35/162 (21%), Positives = 61/162 (37%), Gaps = 17/162 (10%)
Query: 319 SGMVD----QARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVP 374
SG+VD A +F+ M R R P + ++ S + F ++++ +G
Sbjct: 39 SGIVDIKEDDAIDLFQEMIRSRPLPSLVDFSRFFSGVASTKQFNLVLDFCKKMELNGIAH 98
Query: 375 NVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWY 434
N+ T +I + + + K+ G +P+ T F T+++ AVV
Sbjct: 99 NIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLINGLCLESKVSEAVVLV 158
Query: 435 KEMESCGFPPDQKAKN-------------ILLSLAKTADERN 463
M G P+ N + L L + DERN
Sbjct: 159 ARMVENGCQPNVVTYNSIVNGICKSGDTSLALDLLRKMDERN 200
>gi|255572227|ref|XP_002527053.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223533615|gb|EEF35353.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 677
Score = 161 bits (407), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 98/356 (27%), Positives = 170/356 (47%), Gaps = 6/356 (1%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
LI AY ++G +A +V++ M+ KG P++ ++ A++ + GRY A+ +F M S G
Sbjct: 226 LINAYCREGLLGEAFEVMNSMSGKGLKPTLFTYNAVINGLCKKGRYVRAKGVFNEMLSIG 285
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
P TY +L N F EA+++F +L SP D F +I + + G +
Sbjct: 286 LSPDTTTYNTLLVESCRNNNFLEAKDIFSDMLHRGVSP---DLISFSSLIGVSSRNGHLD 342
Query: 222 KARKLFALMAERGVQQSTVTYNSLMSFETN---YKEVSKIYDQMQRAGLQPDVVSYALLI 278
+A F M G+ V Y L++ E +I D+M G DVV+Y ++
Sbjct: 343 QALMYFRDMKTSGLVPDNVIYTILINGYCRNGMMSEALEIRDKMLEQGCALDVVAYNTIL 402
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCS 338
N K + +A A+F+EM++ GV P + L+ G + +A ++F M +
Sbjct: 403 NGLCKKKLLADANALFDEMVERGVVPDFCTFTTLIHGHCKEGNMGKALSLFGIMTQKNIK 462
Query: 339 PDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEI 398
PDI +Y ++ + ++ME A + + + PN I+Y L+ GY + + + +
Sbjct: 463 PDIVTYNILIDGFCKTTEMEKANELWNEMISRKIFPNHISYAILVNGYCNLGFVSEAFRL 522
Query: 399 YDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLS 454
+D+M GIKP T++ Y ++ D A + +M S G PD N L++
Sbjct: 523 WDEMIRKGIKPTLVTCNTVIKGYCRSGDLSKADEFLGKMISEGVGPDSITYNTLIN 578
Score = 152 bits (384), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 100/412 (24%), Positives = 188/412 (45%), Gaps = 12/412 (2%)
Query: 63 VLGTLVRLKQLK-KWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSF 121
+LG LV++ + W V +E+ +S + N +++ A K + + L
Sbjct: 156 LLGGLVKMGWVDLAWEVYNEI-----ARSGIELNVYTLNIMVNALCKDHKIDDVKPFLID 210
Query: 122 MNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANK 181
M +KG +V++ L+ AY R G A + M G +P+ TY ++ + +
Sbjct: 211 MEQKGIFADIVTYNTLINAYCREGLLGEAFEVMNSMSGKGLKPTLFTYNAVINGLCKKGR 270
Query: 182 FKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVT 241
+ A+ VF +L L PD ++ ++ + + +A+ +F+ M RGV ++
Sbjct: 271 YVRAKGVFNEMLS---IGLSPDTTTYNTLLVESCRNNNFLEAKDIFSDMLHRGVSPDLIS 327
Query: 242 YNSLMSFETNYKEVSKI---YDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEML 298
++SL+ + + + + M+ +GL PD V Y +LIN Y + EAL + ++ML
Sbjct: 328 FSSLIGVSSRNGHLDQALMYFRDMKTSGLVPDNVIYTILINGYCRNGMMSEALEIRDKML 387
Query: 299 DAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDME 358
+ G AYN +L+ ++ A +F M PD C++TT++ + +M
Sbjct: 388 EQGCALDVVAYNTILNGLCKKKLLADANALFDEMVERGVVPDFCTFTTLIHGHCKEGNMG 447
Query: 359 GAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIM 418
A F + Q P+++TY LI G+ K +EK E++++M I PN + ++
Sbjct: 448 KALSLFGIMTQKNIKPDIVTYNILIDGFCKTTEMEKANELWNEMISRKIFPNHISYAILV 507
Query: 419 DAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLG 470
+ Y A + EM G P N ++ + + ++A+E LG
Sbjct: 508 NGYCNLGFVSEAFRLWDEMIRKGIKPTLVTCNTVIKGYCRSGDLSKADEFLG 559
Score = 145 bits (366), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 90/379 (23%), Positives = 177/379 (46%), Gaps = 35/379 (9%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
L+ + +F +A+ + S M +G +P ++S ++L+ R G A FR M++SG
Sbjct: 296 LLVESCRNNNFLEAKDIFSDMLHRGVSPDLISFSSLIGVSSRNGHLDQALMYFRDMKTSG 355
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKS----------------------- 198
P + Y I++ + EA E+ +L++ +
Sbjct: 356 LVPDNVIYTILINGYCRNGMMSEALEIRDKMLEQGCALDVVAYNTILNGLCKKKLLADAN 415
Query: 199 ---------PLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLM--- 246
+ PD F +I+ + K G KA LF +M ++ ++ VTYN L+
Sbjct: 416 ALFDEMVERGVVPDFCTFTTLIHGHCKEGNMGKALSLFGIMTQKNIKPDIVTYNILIDGF 475
Query: 247 SFETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTH 306
T ++ ++++++M + P+ +SYA+L+N Y EA +++EM+ G++PT
Sbjct: 476 CKTTEMEKANELWNEMISRKIFPNHISYAILVNGYCNLGFVSEAFRLWDEMIRKGIKPTL 535
Query: 307 KAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRR 366
N ++ + SG + +A M + PD +Y T+++ +V M+ A +
Sbjct: 536 VTCNTVIKGYCRSGDLSKADEFLGKMISEGVGPDSITYNTLINGFVKGEYMDKAFFLINK 595
Query: 367 LKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKD 426
++ G P+V+TY ++ G+ + +++ I KM GI P+++ +TT+++ Y +
Sbjct: 596 METKGLQPDVVTYNVILNGFCRQGRMQEAELILRKMIERGIDPDRSTYTTLINGYVSQDN 655
Query: 427 FDSAVVWYKEMESCGFPPD 445
A ++ EM GF PD
Sbjct: 656 LKEAFRFHDEMLQRGFVPD 674
Score = 99.0 bits (245), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 92/397 (23%), Positives = 160/397 (40%), Gaps = 45/397 (11%)
Query: 133 SHTALMEAYGRGG--RYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFM 190
+ T ++ R G R + E++ + G L + ++++ +V+A K E + F
Sbjct: 82 AQTLILRMIRRSGVSRVEIVESLISMSSTCGV--DNLVFDLLIRSYVQARKLNEGTDTFK 139
Query: 191 TLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLM-SFE 249
L + + ++ K G + A +++ +A G++ + T N ++ +
Sbjct: 140 IL---RRKGFLVSINACNSLLGGLVKMGWVDLAWEVYNEIARSGIELNVYTLNIMVNALC 196
Query: 250 TNYK--EVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHK 307
++K +V M++ G+ D+V+Y LINAY + EA V M G++PT
Sbjct: 197 KDHKIDDVKPFLIDMEQKGIFADIVTYNTLINAYCREGLLGEAFEVMNSMSGKGLKPTLF 256
Query: 308 AYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTML------------------- 348
YN +++ G +A+ VF M SPD +Y T+L
Sbjct: 257 TYNAVINGLCKKGRYVRAKGVFNEMLSIGLSPDTTTYNTLLVESCRNNNFLEAKDIFSDM 316
Query: 349 ------------SAYVNASDMEG----AEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNL 392
S+ + S G A +FR +K G VP+ + Y LI GY + +
Sbjct: 317 LHRGVSPDLISFSSLIGVSSRNGHLDQALMYFRDMKTSGLVPDNVIYTILINGYCRNGMM 376
Query: 393 EKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNIL 452
+ +EI DKM G + + TI++ K K A + EM G PD L
Sbjct: 377 SEALEIRDKMLEQGCALDVVAYNTILNGLCKKKLLADANALFDEMVERGVVPDFCTFTTL 436
Query: 453 LSLAKTADERNEANELLGNFNHPNNEPGINGLSISVD 489
+ +A L G N +P I +I +D
Sbjct: 437 IHGHCKEGNMGKALSLFGIMTQKNIKPDIVTYNILID 473
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 66/314 (21%), Positives = 139/314 (44%), Gaps = 18/314 (5%)
Query: 159 SSGPRPSALTYQIILKLF-VEANKFKEAEEVFMTLLDEE--------------KSPLKPD 203
SS P S L +I+L L V + + +A+ + + ++ S D
Sbjct: 55 SSAPPDSFLVEKILLNLRRVRSKRLSDAQTLILRMIRRSGVSRVEIVESLISMSSTCGVD 114
Query: 204 QKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVS---KIYD 260
+F ++I Y +A + F ++ +G S NSL+ V ++Y+
Sbjct: 115 NLVFDLLIRSYVQARKLNEGTDTFKILRRKGFLVSINACNSLLGGLVKMGWVDLAWEVYN 174
Query: 261 QMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISG 320
++ R+G++ +V + +++NA K + ++ +M G+ YN L++A+ G
Sbjct: 175 EIARSGIELNVYTLNIMVNALCKDHKIDDVKPFLIDMEQKGIFADIVTYNTLINAYCREG 234
Query: 321 MVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYG 380
++ +A V M P + +Y +++ A+ F + G P+ TY
Sbjct: 235 LLGEAFEVMNSMSGKGLKPTLFTYNAVINGLCKKGRYVRAKGVFNEMLSIGLSPDTTTYN 294
Query: 381 TLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESC 440
TL+ + NN + +I+ M G+ P+ F++++ +N D A++++++M++
Sbjct: 295 TLLVESCRNNNFLEAKDIFSDMLHRGVSPDLISFSSLIGVSSRNGHLDQALMYFRDMKTS 354
Query: 441 GFPPDQKAKNILLS 454
G PD IL++
Sbjct: 355 GLVPDNVIYTILIN 368
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 89/179 (49%), Gaps = 6/179 (3%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + + +L+ Y G ++A ++ M +KG P++V+ +++ Y R G A+
Sbjct: 499 NHISYAILVNGYCNLGFVSEAFRLWDEMIRKGIKPTLVTCNTVIKGYCRSGDLSKADEFL 558
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
+M S G P ++TY ++ FV+ +A F + E L+PD +++++ +
Sbjct: 559 GKMISEGVGPDSITYNTLINGFVKGEYMDKA---FFLINKMETKGLQPDVVTYNVILNGF 615
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSLMS---FETNYKEVSKIYDQMQRAGLQPD 270
+ G ++A + M ERG+ TY +L++ + N KE + +D+M + G PD
Sbjct: 616 CRQGRMQEAELILRKMIERGIDPDRSTYTTLINGYVSQDNLKEAFRFHDEMLQRGFVPD 674
>gi|15221411|ref|NP_177623.1| plastid transcriptionally active 2 [Arabidopsis thaliana]
gi|75194055|sp|Q9S7Q2.1|PP124_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g74850, chloroplastic; AltName: Full=Protein PLASTID
TRANSCRIPTIONALLY ACTIVE 2; Flags: Precursor
gi|5882738|gb|AAD55291.1|AC008263_22 Contains 3 PF|01535 DUF17 domains [Arabidopsis thaliana]
gi|12323908|gb|AAG51934.1|AC013258_28 hypothetical protein; 81052-84129 [Arabidopsis thaliana]
gi|332197518|gb|AEE35639.1| plastid transcriptionally active 2 [Arabidopsis thaliana]
Length = 862
Score = 161 bits (407), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 99/386 (25%), Positives = 182/386 (47%), Gaps = 6/386 (1%)
Query: 76 WNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHT 135
W + ++++ Q W NE + ++I+ G++G +K +V M +G + SV S+T
Sbjct: 121 WQRSLRLFKYMQRQIWCKPNEHIYTIMISLLGREGLLDKCLEVFDEMPSQGVSRSVFSYT 180
Query: 136 ALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDE 195
AL+ AYGR GRY+ + + RM++ PS LTY ++ + E + +
Sbjct: 181 ALINAYGRNGRYETSLELLDRMKNEKISPSILTYNTVINACARGGL--DWEGLLGLFAEM 238
Query: 196 EKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEV 255
++PD ++ ++ G ++A +F M + G+ TY+ L+ + +
Sbjct: 239 RHEGIQPDIVTYNTLLSACAIRGLGDEAEMVFRTMNDGGIVPDLTTYSHLVETFGKLRRL 298
Query: 256 SKIYD---QMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNIL 312
K+ D +M G PD+ SY +L+ AY K+ +EA+ VF +M AG P Y++L
Sbjct: 299 EKVCDLLGEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVL 358
Query: 313 LDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGF 372
L+ F SG D R +F M+ PD +Y ++ + + F + ++
Sbjct: 359 LNLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEENI 418
Query: 373 VPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVV 432
P++ TY +I K E +I M N I P+ +T +++A+G+ ++ A+V
Sbjct: 419 EPDMETYEGIIFACGKGGLHEDARKILQYMTANDIVPSSKAYTGVIEAFGQAALYEEALV 478
Query: 433 WYKEMESCGFPPD-QKAKNILLSLAK 457
+ M G P + ++L S A+
Sbjct: 479 AFNTMHEVGSNPSIETFHSLLYSFAR 504
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 93/399 (23%), Positives = 185/399 (46%), Gaps = 8/399 (2%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
L++A +G ++AE V MN G P + +++ L+E +G+ R + + M S G
Sbjct: 253 LLSACAIRGLGDEAEMVFRTMNDGGIVPDLTTYSHLVETFGKLRRLEKVCDLLGEMASGG 312
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
P +Y ++L+ + ++ KEA VF + + + P+ + +++ ++ ++G Y+
Sbjct: 313 SLPDITSYNVLLEAYAKSGSIKEAMGVFHQM---QAAGCTPNANTYSVLLNLFGQSGRYD 369
Query: 222 KARKLFALMAERGVQQSTVTYNSLMSF--ETNY-KEVSKIYDQMQRAGLQPDVVSYALLI 278
R+LF M TYN L+ E Y KEV ++ M ++PD+ +Y +I
Sbjct: 370 DVRQLFLEMKSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEENIEPDMETYEGII 429
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCS 338
A GK E+A + + M + P+ KAY +++AF + + ++A F M +
Sbjct: 430 FACGKGGLHEDARKILQYMTANDIVPSSKAYTGVIEAFGQAALYEEALVAFNTMHEVGSN 489
Query: 339 PDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEI 398
P I ++ ++L ++ ++ +E RL G N T+ I+ Y + E+ ++
Sbjct: 490 PSIETFHSLLYSFARGGLVKESEAILSRLVDSGIPRNRDTFNAQIEAYKQGGKFEEAVKT 549
Query: 399 YDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKT 458
Y M + P++ ++ Y + D ++EM++ P ++L++
Sbjct: 550 YVDMEKSRCDPDERTLEAVLSVYSFARLVDECREQFEEMKASDILPSIMCYCMMLAVYGK 609
Query: 459 ADERNEANELLGNF--NHPNNEPGINGLSISVDEEDDDD 495
+ ++ NELL N +N + G I D +DD +
Sbjct: 610 TERWDDVNELLEEMLSNRVSNIHQVIGQMIKGDYDDDSN 648
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 87/351 (24%), Positives = 168/351 (47%), Gaps = 16/351 (4%)
Query: 145 GRYK-NAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSP---- 199
G+Y + E++ ++ S PR S I K + N F + F D ++S
Sbjct: 70 GKYSYDVESLINKLSSLPPRGSIARCLDIFKNKLSLNDFALVFKEFAGRGDWQRSLRLFK 129
Query: 200 -------LKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLM-SFETN 251
KP++ ++ +MI + + G +K ++F M +GV +S +Y +L+ ++ N
Sbjct: 130 YMQRQIWCKPNEHIYTIMISLLGREGLLDKCLEVFDEMPSQGVSRSVFSYTALINAYGRN 189
Query: 252 --YKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEAL-AVFEEMLDAGVRPTHKA 308
Y+ ++ D+M+ + P +++Y +INA + + E L +F EM G++P
Sbjct: 190 GRYETSLELLDRMKNEKISPSILTYNTVINACARGGLDWEGLLGLFAEMRHEGIQPDIVT 249
Query: 309 YNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLK 368
YN LL A AI G+ D+A VF+ M PD+ +Y+ ++ + +E +
Sbjct: 250 YNTLLSACAIRGLGDEAEMVFRTMNDGGIVPDLTTYSHLVETFGKLRRLEKVCDLLGEMA 309
Query: 369 QDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFD 428
G +P++ +Y L++ YAK ++++ M ++ +M+ G PN ++ +++ +G++ +D
Sbjct: 310 SGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGRYD 369
Query: 429 SAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEP 479
+ EM+S PD NIL+ + E L + N EP
Sbjct: 370 DVRQLFLEMKSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEENIEP 420
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 96/408 (23%), Positives = 189/408 (46%), Gaps = 39/408 (9%)
Query: 99 FLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGR-YKNAEAIFRRM 157
+ LI AYG+ G + + ++L M + +PS++++ ++ A RGG ++ +F M
Sbjct: 179 YTALINAYGRNGRYETSLELLDRMKNEKISPSILTYNTVINACARGGLDWEGLLGLFAEM 238
Query: 158 QSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSP--------------LK-- 201
+ G +P +TY +L EAE VF T+ D P L+
Sbjct: 239 RHEGIQPDIVTYNTLLSACAIRGLGDEAEMVFRTMNDGGIVPDLTTYSHLVETFGKLRRL 298
Query: 202 ----------------PDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSL 245
PD +++++ Y K+G ++A +F M G + TY+ L
Sbjct: 299 EKVCDLLGEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVL 358
Query: 246 MSF---ETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGV 302
++ Y +V +++ +M+ + PD +Y +LI +G+ +E + +F +M++ +
Sbjct: 359 LNLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEENI 418
Query: 303 RPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEK 362
P + Y ++ A G+ + AR + + M + P +YT ++ A+ A+ E A
Sbjct: 419 EPDMETYEGIIFACGKGGLHEDARKILQYMTANDIVPSSKAYTGVIEAFGQAALYEEALV 478
Query: 363 FFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYG 422
F + + G P++ T+ +L+ +A+ +++ I ++ +GI N+ F ++AY
Sbjct: 479 AFNTMHEVGSNPSIETFHSLLYSFARGGLVKESEAILSRLVDSGIPRNRDTFNAQIEAYK 538
Query: 423 KNKDFDSAVVWYKEMESCGFPPDQKAKNILLSL---AKTADERNEANE 467
+ F+ AV Y +ME PD++ +LS+ A+ DE E E
Sbjct: 539 QGGKFEEAVKTYVDMEKSRCDPDERTLEAVLSVYSFARLVDECREQFE 586
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/210 (21%), Positives = 90/210 (42%), Gaps = 7/210 (3%)
Query: 99 FLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQ 158
F L+ ++ + G ++E +LS + G + + A +EAY +GG+++ A + M+
Sbjct: 495 FHSLLYSFARGGLVKESEAILSRLVDSGIPRNRDTFNAQIEAYKQGGKFEEAVKTYVDME 554
Query: 159 SSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAG 218
S P T + +L ++ A E E F + + S + P + MM+ +Y K
Sbjct: 555 KSRCDPDERTLEAVLSVYSFARLVDECREQFEEM---KASDILPSIMCYCMMLAVYGKTE 611
Query: 219 GYEKARKLFALMAERGVQQSTVTYNSLMSF----ETNYKEVSKIYDQMQRAGLQPDVVSY 274
++ +L M V ++ ++N++ V + D++ G + Y
Sbjct: 612 RWDDVNELLEEMLSNRVSNIHQVIGQMIKGDYDDDSNWQIVEYVLDKLNSEGCGLGIRFY 671
Query: 275 ALLINAYGKARREEEALAVFEEMLDAGVRP 304
L++A ++E A V E G+ P
Sbjct: 672 NALLDALWWLGQKERAARVLNEATKRGLFP 701
>gi|224136626|ref|XP_002322376.1| predicted protein [Populus trichocarpa]
gi|222869372|gb|EEF06503.1| predicted protein [Populus trichocarpa]
Length = 715
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 103/342 (30%), Positives = 175/342 (51%), Gaps = 7/342 (2%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N ++F LI K+G +A ++L M KKG+ P+V +HTAL++ + G + A +F
Sbjct: 300 NLINFTSLINGLCKRGSIKQAFEMLEEMVKKGWKPNVYTHTALIDGLCKKGWTEKAFRLF 359
Query: 155 RRM-QSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYM 213
++ +S +P+ TY ++ + + +K AE M L ++ L P+ K + +I
Sbjct: 360 LKLVRSDDYKPNVHTYTSMIHGYCKEDKLNRAE---MLLSRMKEQGLVPNTKTYTCLIDG 416
Query: 214 YKKAGGYEKARKLFALMAERGVQQSTVTYNSL---MSFETNYKEVSKIYDQMQRAGLQPD 270
+ KAG +EKA +L LM + G + TYN+ + + + E K+ + R GLQ D
Sbjct: 417 HSKAGNFEKAYELMDLMGKEGFSANIFTYNAFIDSLCKKGRFLEACKLLKKGFRLGLQAD 476
Query: 271 VVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFK 330
V+Y +LI+ + EAL F +M AGV+P YN L+ AF+ ++++ +F
Sbjct: 477 TVTYTILISELCRRADTREALVFFSKMFKAGVQPDMHTYNTLIAAFSRQRRMEESEKLFA 536
Query: 331 CMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVN 390
P +YT+M+ Y ++ A KFF R+ G P+ +TYG LI G K +
Sbjct: 537 EAVGLGLVPTKETYTSMICGYCRDRNVSLALKFFNRMSDHGCTPDSLTYGALISGLCKES 596
Query: 391 NLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVV 432
L++ ++Y+ M G+ P + T+ Y K D +A+V
Sbjct: 597 KLDEACQLYEAMVDKGLSPCEVTRLTLAYEYCKQDDSATAMV 638
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 80/378 (21%), Positives = 165/378 (43%), Gaps = 7/378 (1%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
+ + + ++ AY + G + ++ L M ++G+ + T ++ + G F
Sbjct: 230 DSVSYKLMAIAYCRMGRISDTDRWLKDMVRRGFVVDNATCTLMISTFCEKGFASRVFWYF 289
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
+ G +P+ + + ++ + K+A E+ ++ K KP+ +I
Sbjct: 290 DKWVELGLKPNLINFTSLINGLCKRGSIKQAFEMLEEMV---KKGWKPNVYTHTALIDGL 346
Query: 215 KKAGGYEKARKLFA-LMAERGVQQSTVTYNSLM---SFETNYKEVSKIYDQMQRAGLQPD 270
K G EKA +LF L+ + + TY S++ E + +M+ GL P+
Sbjct: 347 CKKGWTEKAFRLFLKLVRSDDYKPNVHTYTSMIHGYCKEDKLNRAEMLLSRMKEQGLVPN 406
Query: 271 VVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFK 330
+Y LI+ + KA E+A + + M G YN +D+ G +A + K
Sbjct: 407 TKTYTCLIDGHSKAGNFEKAYELMDLMGKEGFSANIFTYNAFIDSLCKKGRFLEACKLLK 466
Query: 331 CMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVN 390
R D +YT ++S +D A FF ++ + G P++ TY TLI +++
Sbjct: 467 KGFRLGLQADTVTYTILISELCRRADTREALVFFSKMFKAGVQPDMHTYNTLIAAFSRQR 526
Query: 391 NLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKN 450
+E+ +++ + G+ P + +T+++ Y ++++ A+ ++ M G PD
Sbjct: 527 RMEESEKLFAEAVGLGLVPTKETYTSMICGYCRDRNVSLALKFFNRMSDHGCTPDSLTYG 586
Query: 451 ILLSLAKTADERNEANEL 468
L+S + +EA +L
Sbjct: 587 ALISGLCKESKLDEACQL 604
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/177 (23%), Positives = 77/177 (43%)
Query: 277 LINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDR 336
++ + + + +EA+ + EM + G+ T + N + G+V A VF MR
Sbjct: 167 MVRVFAEIGKFQEAVNMVIEMENHGLVLTVRTLNCVTGVAGEMGLVGYAENVFDEMRVRG 226
Query: 337 CSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMM 396
PD SY M AY + +++ + + + GFV + T +I + + ++
Sbjct: 227 VCPDSVSYKLMAIAYCRMGRISDTDRWLKDMVRRGFVVDNATCTLMISTFCEKGFASRVF 286
Query: 397 EIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILL 453
+DK G+KPN FT++++ K A +EM G+ P+ L+
Sbjct: 287 WYFDKWVELGLKPNLINFTSLINGLCKRGSIKQAFEMLEEMVKKGWKPNVYTHTALI 343
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/239 (22%), Positives = 96/239 (40%), Gaps = 1/239 (0%)
Query: 252 YKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNI 311
++E + +M+ GL V + + G+ A VF+EM GV P +Y +
Sbjct: 177 FQEAVNMVIEMENHGLVLTVRTLNCVTGVAGEMGLVGYAENVFDEMRVRGVCPDSVSYKL 236
Query: 312 LLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDG 371
+ A+ G + K M R D + T M+S + +F + + G
Sbjct: 237 MAIAYCRMGRISDTDRWLKDMVRRGFVVDNATCTLMISTFCEKGFASRVFWYFDKWVELG 296
Query: 372 FVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAV 431
PN+I + +LI G K ++++ E+ ++M G KPN T ++D K + A
Sbjct: 297 LKPNLINFTSLINGLCKRGSIKQAFEMLEEMVKKGWKPNVYTHTALIDGLCKKGWTEKAF 356
Query: 432 -VWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGINGLSISVD 489
++ K + S + P+ ++ D+ N A LL P + +D
Sbjct: 357 RLFLKLVRSDDYKPNVHTYTSMIHGYCKEDKLNRAEMLLSRMKEQGLVPNTKTYTCLID 415
>gi|41152686|dbj|BAD08211.1| hypothetical protein [Oryza sativa Indica Group]
gi|67906118|dbj|BAE00069.1| PPR protein [Oryza sativa Indica Group]
Length = 794
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 101/366 (27%), Positives = 181/366 (49%), Gaps = 14/366 (3%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + + +I A K +KA +VL+ M K G P+ ++ +++ Y G+ K A
Sbjct: 233 NVVTYNSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFL 292
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
++M S G P +TY ++ + + EA ++F ++ K LKP+ + ++ Y
Sbjct: 293 KKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSM---TKRGLKPEITTYGTLLQGY 349
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSK---IYDQMQRAGLQPDV 271
G + L LM G+ + ++ L+ +V + ++ +M++ GL PD
Sbjct: 350 ATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDT 409
Query: 272 VSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKC 331
V+Y +I K+ R E+A+ FE+M+D + P + YN L+ + I D+A+ +
Sbjct: 410 VTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILE 469
Query: 332 MRRDRCSPDICSYTTMLSAYVNASDMEG----AEKFFRRLKQDGFVPNVITYGTLIKGYA 387
M DR IC T ++ +++ EG +EK F + + G PN+ITY TLI GY
Sbjct: 470 ML-DR---GICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPNIITYSTLIDGYC 525
Query: 388 KVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQK 447
+++ ++ M G+KP+ + T+++ Y K + A+V ++EMES G PD
Sbjct: 526 LAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDII 585
Query: 448 AKNILL 453
NI+L
Sbjct: 586 TYNIIL 591
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 91/354 (25%), Positives = 167/354 (47%), Gaps = 6/354 (1%)
Query: 129 PSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEV 188
P VVS+T ++ + + G A + M G P+ +TY I+ +A +A EV
Sbjct: 197 PDVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYNSIIAALCKAQAMDKAMEV 256
Query: 189 FMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSF 248
+++ K+ + P+ + ++ +++ Y +G ++A M GV+ VTYNSLM +
Sbjct: 257 LTSMV---KNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDY 313
Query: 249 ETN---YKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPT 305
E K++D M + GL+P++ +Y L+ Y E + + M+ G+ P
Sbjct: 314 LCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPN 373
Query: 306 HKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFR 365
H ++IL+ A+A G VDQA VF MR+ +PD +Y T++ + +E A ++F
Sbjct: 374 HYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFE 433
Query: 366 RLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNK 425
++ + P I Y +LI + +K E+ +M GI + F +I+D++ K
Sbjct: 434 QMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEG 493
Query: 426 DFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEP 479
+ + M G P+ + L+ A + +EA +LL + +P
Sbjct: 494 RVIESEKLFDLMVRIGVKPNIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKP 547
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 92/352 (26%), Positives = 157/352 (44%), Gaps = 34/352 (9%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNA-EAI 153
N + +LI + G + L + KKG+ ++ T L++ R +A + +
Sbjct: 90 NLCTYGILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIV 149
Query: 154 FRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYM 213
RRM G P+ +Y I+LK + N+ +EA E+ + ++ ++ PD + +I
Sbjct: 150 LRRMTQLGCIPNVFSYNILLKGLCDENRSQEALEL-LQMMPDDGGDCPPDVVSYTTVING 208
Query: 214 YKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSKIYDQMQRAGLQPDVVS 273
+ K G +KA + M +RG+ P+VV+
Sbjct: 209 FFKEGDLDKAYGTYHEMLDRGIL--------------------------------PNVVT 236
Query: 274 YALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMR 333
Y +I A KA+ ++A+ V M+ GV P + YN ++ + SG +A K M
Sbjct: 237 YNSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMH 296
Query: 334 RDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLE 393
D PD+ +Y +++ A K F + + G P + TYGTL++GYA L
Sbjct: 297 SDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALV 356
Query: 394 KMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPD 445
+M + D M NGI PN +F+ ++ AY K D A++ + +M G PD
Sbjct: 357 EMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPD 408
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 87/393 (22%), Positives = 173/393 (44%), Gaps = 12/393 (3%)
Query: 97 MDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRR 156
MD+L K G +A K+ M K+G P + ++ L++ Y G +
Sbjct: 311 MDYLC------KNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDL 364
Query: 157 MQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKK 216
M +G P+ + I++ + + K +A VF + + L PD + +I + K
Sbjct: 365 MVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKM---RQQGLNPDTVTYGTVIGILCK 421
Query: 217 AGGYEKARKLFALMAERGVQQSTVTYNSL---MSFETNYKEVSKIYDQMQRAGLQPDVVS 273
+G E A + F M + + + YNSL + + + ++ +M G+ D +
Sbjct: 422 SGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIF 481
Query: 274 YALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMR 333
+ +I+++ K R E+ +F+ M+ GV+P Y+ L+D + ++G +D+A + M
Sbjct: 482 FNSIIDSHCKEGRVIESEKLFDLMVRIGVKPNIITYSTLIDGYCLAGKMDEATKLLASMV 541
Query: 334 RDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLE 393
PD +Y T+++ Y S ME A FR ++ G P++ITY +++G +
Sbjct: 542 SVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTA 601
Query: 394 KMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILL 453
E+Y + +G + + + I+ KN D A+ ++ + + + NI++
Sbjct: 602 AAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMI 661
Query: 454 SLAKTADERNEANELLGNFNHPNNEPGINGLSI 486
+EA +L + P + S+
Sbjct: 662 GALLKVGRNDEAKDLFAALSANGLVPDVRTYSL 694
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 95/435 (21%), Positives = 194/435 (44%), Gaps = 41/435 (9%)
Query: 59 PKDLVLGTLVRLKQLKKWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKV 118
P+ GTL++ K V L L +++ N F +LI AY KQG ++A V
Sbjct: 337 PEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLV 396
Query: 119 LSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVE 178
S M ++G P V++ ++ + GR ++A F +M P + Y ++
Sbjct: 397 FSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCI 456
Query: 179 ANKFKEAEEVFMTLLDE-----------------EKSPLKPDQKMFHMMIYM-------- 213
+K+ +A+E+ + +LD ++ + +K+F +M+ +
Sbjct: 457 FDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPNIIT 516
Query: 214 -------YKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSKIYD------ 260
Y AG ++A KL A M G++ VTYN+L++ Y ++S++ D
Sbjct: 517 YSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLIN---GYCKISRMEDALVLFR 573
Query: 261 QMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISG 320
+M+ +G+ PD+++Y +++ + RR A ++ + ++G + YNI+L +
Sbjct: 574 EMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNN 633
Query: 321 MVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYG 380
+ D+A +F+ + + ++ M+ A + + A+ F L +G VP+V TY
Sbjct: 634 LTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYS 693
Query: 381 TLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESC 440
+ + + LE++ +++ M NG N + +I+ + D A + ++
Sbjct: 694 LMAENLIEQGLLEELDDLFLSMEENGCTANSRMLNSIVRKLLQRGDITRAGTYLFMIDEK 753
Query: 441 GFPPDQKAKNILLSL 455
F + ++ L L
Sbjct: 754 HFSLEASTASLFLDL 768
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 72/305 (23%), Positives = 121/305 (39%), Gaps = 43/305 (14%)
Query: 221 EKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSKI--YDQMQRAG---LQPDVVSYA 275
E AR +F + RG S N ++ + + + Y++M RAG + P++ +Y
Sbjct: 36 EDARHVFDELLRRGRGASIYGLNCALADVARHSPAAAVSRYNRMARAGADEVTPNLCTYG 95
Query: 276 LLINAYGKARREEEALA------------------------------------VFEEMLD 299
+LI + A R + A V M
Sbjct: 96 ILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTQ 155
Query: 300 AGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDR--CSPDICSYTTMLSAYVNASDM 357
G P +YNILL +A + + M D C PD+ SYTT+++ + D+
Sbjct: 156 LGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDL 215
Query: 358 EGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTI 417
+ A + + G +PNV+TY ++I K ++K ME+ M NG+ PN + +I
Sbjct: 216 DKAYGTYHEMLDRGILPNVVTYNSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSI 275
Query: 418 MDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNN 477
+ Y + A+ + K+M S G PD N L+ EA ++ +
Sbjct: 276 VHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGL 335
Query: 478 EPGIN 482
+P I
Sbjct: 336 KPEIT 340
>gi|15222409|ref|NP_176529.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75205330|sp|Q9SH26.1|PP102_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g63400
gi|6633845|gb|AAF19704.1|AC008047_11 F2K11.22 [Arabidopsis thaliana]
gi|332195974|gb|AEE34095.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 577
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 104/437 (23%), Positives = 208/437 (47%), Gaps = 37/437 (8%)
Query: 53 TRGQPLPKDLVLGTLVR-LKQLKKWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGD 111
+ +PLP L+ + ++KK+++V + E ++ + N + +LI + ++
Sbjct: 77 VKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQ-RLGISHNLYTYNILINCFCRRSQ 135
Query: 112 FNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQI 171
+ A +L M K GY PS+V+ ++L+ Y G R +A A+ +M G RP +T+
Sbjct: 136 ISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTT 195
Query: 172 ILKLFVEANKFKEAEEV--------------------------------FMTLLDEEKSP 199
++ NK EA + F L E +
Sbjct: 196 LIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAK 255
Query: 200 LKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYK---EVS 256
++ + ++ +I K + A LF M +GV+ + +TY+SL+S NY+ + S
Sbjct: 256 IEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDAS 315
Query: 257 KIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAF 316
++ M + P+VV++ LI+A+ K + EA +++EM+ + P Y+ L++ F
Sbjct: 316 RLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGF 375
Query: 317 AISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNV 376
+ +D+A+ +F+ M C P++ +Y T+++ + A ++ + FR + Q G V N
Sbjct: 376 CMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNT 435
Query: 377 ITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKE 436
+TY TLI G+ + + + ++ +M +G+ PN + T++D KN + A+V ++
Sbjct: 436 VTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEY 495
Query: 437 MESCGFPPDQKAKNILL 453
++ P NI++
Sbjct: 496 LQRSKMEPTIYTYNIMI 512
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 86/362 (23%), Positives = 171/362 (47%), Gaps = 6/362 (1%)
Query: 88 IQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRY 147
+Q N + + +++ K+GD + A +L+ M +VV ++ ++++ +
Sbjct: 217 VQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHE 276
Query: 148 KNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMF 207
+A +F M++ G RP+ +TY ++ ++ +A + +++ + + P+ F
Sbjct: 277 DDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERK---INPNVVTF 333
Query: 208 HMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLM---SFETNYKEVSKIYDQMQR 264
+ +I + K G +A KL+ M +R + TY+SL+ E +++ M
Sbjct: 334 NALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMIS 393
Query: 265 AGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQ 324
P+VV+Y LIN + KA+R +E + +F EM G+ Y L+ F + D
Sbjct: 394 KDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDN 453
Query: 325 ARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIK 384
A+ VFK M D P+I +Y T+L +E A F L++ P + TY +I+
Sbjct: 454 AQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIE 513
Query: 385 GYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPP 444
G K +E +++ + + G+KP+ I+ T++ + + + A +++M G P
Sbjct: 514 GMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADALFRKMREDGPLP 573
Query: 445 DQ 446
D
Sbjct: 574 DS 575
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 73/325 (22%), Positives = 139/325 (42%), Gaps = 8/325 (2%)
Query: 149 NAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDE-EKSPLKPDQKMF 207
+A +F M S P PS + +L + KF ++ ++L ++ ++ + + +
Sbjct: 68 DAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKF----DLVISLGEKMQRLGISHNLYTY 123
Query: 208 HMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVS---KIYDQMQR 264
+++I + + A L M + G + S VT +SL++ + K +S + DQM
Sbjct: 124 NILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVE 183
Query: 265 AGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQ 324
G +PD +++ LI+ + EA+A+ + M+ G +P Y ++++ G +D
Sbjct: 184 MGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDL 243
Query: 325 ARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIK 384
A + M + ++ Y+T++ + + A F ++ G PNVITY +LI
Sbjct: 244 AFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLIS 303
Query: 385 GYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPP 444
+ M I PN F ++DA+ K A Y EM P
Sbjct: 304 CLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDP 363
Query: 445 DQKAKNILLSLAKTADERNEANELL 469
D + L++ D +EA +
Sbjct: 364 DIFTYSSLINGFCMHDRLDEAKHMF 388
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 65/270 (24%), Positives = 125/270 (46%), Gaps = 3/270 (1%)
Query: 223 ARKLFALMAERGVQQSTVTYNSLMSFETNYKE---VSKIYDQMQRAGLQPDVVSYALLIN 279
A LF M + S +N L+S K+ V + ++MQR G+ ++ +Y +LIN
Sbjct: 69 AIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILIN 128
Query: 280 AYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSP 339
+ + + ALA+ +M+ G P+ + LL+ + + A + M P
Sbjct: 129 CFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRP 188
Query: 340 DICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIY 399
D ++TT++ + A R+ Q G PN++TYG ++ G K +++ +
Sbjct: 189 DTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLL 248
Query: 400 DKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTA 459
+KM I+ N I++T++D+ K + D A+ + EME+ G P+ + L+S
Sbjct: 249 NKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNY 308
Query: 460 DERNEANELLGNFNHPNNEPGINGLSISVD 489
+ ++A+ LL + P + + +D
Sbjct: 309 ERWSDASRLLSDMIERKINPNVVTFNALID 338
Score = 95.5 bits (236), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 83/389 (21%), Positives = 171/389 (43%), Gaps = 54/389 (13%)
Query: 88 IQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRY 147
+ S ++FN+ L++A K F+ + M + G + ++ ++ L+ + R +
Sbjct: 82 LPSIFEFNK-----LLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQI 136
Query: 148 KNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEE-KSPLKPDQKM 206
A A+ +M G PS +T +L + + +A + L+D+ + +PD
Sbjct: 137 SLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDA----VALVDQMVEMGYRPDTIT 192
Query: 207 FHMMI---YMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVS---KIYD 260
F +I +++ KA +A L M +RG Q + VTY +++ ++ + +
Sbjct: 193 FTTLIHGLFLHNKA---SEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLN 249
Query: 261 QMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISG 320
+M+ A ++ +VV Y+ +I++ K R E++AL +F EM + GVR
Sbjct: 250 KMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVR----------------- 292
Query: 321 MVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYG 380
P++ +Y++++S N A + + + PNV+T+
Sbjct: 293 ------------------PNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFN 334
Query: 381 TLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESC 440
LI + K L + ++YD+M I P+ ++++++ + + D A ++ M S
Sbjct: 335 ALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISK 394
Query: 441 GFPPDQKAKNILLSLAKTADERNEANELL 469
P+ N L++ A +E EL
Sbjct: 395 DCFPNVVTYNTLINGFCKAKRIDEGVELF 423
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 51/255 (20%), Positives = 119/255 (46%), Gaps = 6/255 (2%)
Query: 169 YQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFA 228
Y+ IL+ + + K +A +F ++ + PL P F+ ++ K ++ L
Sbjct: 53 YREILRNGLHSMKLDDAIGLFGGMV--KSRPL-PSIFEFNKLLSAIAKMKKFDLVISLGE 109
Query: 229 LMAERGVQQSTVTYNSLMSFETNYKEVS---KIYDQMQRAGLQPDVVSYALLINAYGKAR 285
M G+ + TYN L++ ++S + +M + G +P +V+ + L+N Y +
Sbjct: 110 KMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGK 169
Query: 286 REEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYT 345
R +A+A+ ++M++ G RP + L+ + +A + M + C P++ +Y
Sbjct: 170 RISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYG 229
Query: 346 TMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVN 405
+++ D++ A +++ NV+ Y T+I K + + + ++ +M
Sbjct: 230 VVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENK 289
Query: 406 GIKPNQTIFTTIMDA 420
G++PN +++++
Sbjct: 290 GVRPNVITYSSLISC 304
Score = 42.7 bits (99), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 54/107 (50%), Gaps = 6/107 (5%)
Query: 63 VLGTLVRLKQLKKWNVVSEVLEWLRIQ-SWWDFNEMDFLMLITAYGKQGDFNKAEKVLSF 121
+L L + +L+K VV E L+ +++ + + +N ++I K G +
Sbjct: 476 LLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYN-----IMIEGMCKAGKVEDGWDLFCS 530
Query: 122 MNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALT 168
++ KG P V+ + ++ + R G + A+A+FR+M+ GP P + T
Sbjct: 531 LSLKGVKPDVIIYNTMISGFCRKGLKEEADALFRKMREDGPLPDSGT 577
>gi|18071404|gb|AAL58263.1|AC068923_5 putative membrane-associated protein [Oryza sativa Japonica Group]
Length = 1219
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 100/366 (27%), Positives = 181/366 (49%), Gaps = 14/366 (3%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + + +I A K +KA +VL+ M K G P+ ++ +++ Y G+ K A
Sbjct: 233 NVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFL 292
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
++M S G P +TY ++ + + EA ++F ++ K LKP+ + ++ Y
Sbjct: 293 KKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSM---TKRGLKPEITTYGTLLQGY 349
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSK---IYDQMQRAGLQPDV 271
G + L LM G+ + ++ L+ +V + ++ +M++ GL PD
Sbjct: 350 ATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDT 409
Query: 272 VSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKC 331
V+Y +I K+ R E+A+ FE+M+D + P + YN L+ + I D+A+ +
Sbjct: 410 VTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILE 469
Query: 332 MRRDRCSPDICSYTTMLSAYVNASDMEG----AEKFFRRLKQDGFVPNVITYGTLIKGYA 387
M DR IC T ++ +++ EG +EK F + + G P++ITY TLI GY
Sbjct: 470 ML-DR---GICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYC 525
Query: 388 KVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQK 447
+++ ++ M G+KP+ + T+++ Y K + A+V ++EMES G PD
Sbjct: 526 LAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDII 585
Query: 448 AKNILL 453
NI+L
Sbjct: 586 TYNIIL 591
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 98/390 (25%), Positives = 180/390 (46%), Gaps = 8/390 (2%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKG--YAPSVVSHTALMEAYGRGGRYKNAEA 152
N + +L+ + +A ++L M G P VVS+T ++ + + G A
Sbjct: 161 NVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAYG 220
Query: 153 IFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIY 212
+ M G P+ +TY I+ +A +A EV +++ K+ + P+ + ++ +++
Sbjct: 221 TYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMV---KNGVMPNCRTYNSIVH 277
Query: 213 MYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETN---YKEVSKIYDQMQRAGLQP 269
Y +G ++A M GV+ VTYNSLM + E K++D M + GL+P
Sbjct: 278 GYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKP 337
Query: 270 DVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVF 329
++ +Y L+ Y E + + M+ G+ P H ++IL+ A+A G VDQA VF
Sbjct: 338 EITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVF 397
Query: 330 KCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKV 389
MR+ +PD +Y T++ + +E A ++F ++ + P I Y +LI
Sbjct: 398 SKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIF 457
Query: 390 NNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAK 449
+ +K E+ +M GI + F +I+D++ K + + M G PD
Sbjct: 458 DKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITY 517
Query: 450 NILLSLAKTADERNEANELLGNFNHPNNEP 479
+ L+ A + +EA +LL + +P
Sbjct: 518 STLIDGYCLAGKMDEATKLLASMVSVGMKP 547
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 92/352 (26%), Positives = 157/352 (44%), Gaps = 34/352 (9%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNA-EAI 153
N + +LI + G + L + KKG+ ++ T L++ R +A + +
Sbjct: 90 NLCTYGILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIV 149
Query: 154 FRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYM 213
RRM G P+ +Y I+LK + N+ +EA E + ++ ++ PD + +I
Sbjct: 150 LRRMTQLGCIPNVFSYNILLKGLCDENRSQEALE-LLQMMPDDGGDCPPDVVSYTTVING 208
Query: 214 YKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSKIYDQMQRAGLQPDVVS 273
+ K G +KA + M +RG+ P+VV+
Sbjct: 209 FFKEGDLDKAYGTYHEMLDRGIL--------------------------------PNVVT 236
Query: 274 YALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMR 333
Y+ +I A KA+ ++A+ V M+ GV P + YN ++ + SG +A K M
Sbjct: 237 YSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMH 296
Query: 334 RDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLE 393
D PD+ +Y +++ A K F + + G P + TYGTL++GYA L
Sbjct: 297 SDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALV 356
Query: 394 KMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPD 445
+M + D M NGI PN +F+ ++ AY K D A++ + +M G PD
Sbjct: 357 EMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPD 408
Score = 132 bits (333), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 87/393 (22%), Positives = 173/393 (44%), Gaps = 12/393 (3%)
Query: 97 MDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRR 156
MD+L K G +A K+ M K+G P + ++ L++ Y G +
Sbjct: 311 MDYLC------KNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDL 364
Query: 157 MQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKK 216
M +G P+ + I++ + + K +A VF + + L PD + +I + K
Sbjct: 365 MVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKM---RQQGLNPDTVTYGTVIGILCK 421
Query: 217 AGGYEKARKLFALMAERGVQQSTVTYNSL---MSFETNYKEVSKIYDQMQRAGLQPDVVS 273
+G E A + F M + + + YNSL + + + ++ +M G+ D +
Sbjct: 422 SGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIF 481
Query: 274 YALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMR 333
+ +I+++ K R E+ +F+ M+ GV+P Y+ L+D + ++G +D+A + M
Sbjct: 482 FNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMV 541
Query: 334 RDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLE 393
PD +Y T+++ Y S ME A FR ++ G P++ITY +++G +
Sbjct: 542 SVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTA 601
Query: 394 KMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILL 453
E+Y + +G + + + I+ KN D A+ ++ + + + NI++
Sbjct: 602 AAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMI 661
Query: 454 SLAKTADERNEANELLGNFNHPNNEPGINGLSI 486
+EA +L + P + S+
Sbjct: 662 GALLKVGRNDEAKDLFAALSANGLVPDVRTYSL 694
Score = 116 bits (290), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 96/435 (22%), Positives = 191/435 (43%), Gaps = 41/435 (9%)
Query: 59 PKDLVLGTLVRLKQLKKWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKV 118
P+ GTL++ K V L L +++ N F +LI AY KQG ++A V
Sbjct: 337 PEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLV 396
Query: 119 LSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVE 178
S M ++G P V++ ++ + GR ++A F +M P + Y ++
Sbjct: 397 FSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCI 456
Query: 179 ANKFKEAEEVFMTLLDEE--------------------------------KSPLKPDQKM 206
+K+ +A+E+ + +LD + +KPD
Sbjct: 457 FDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIIT 516
Query: 207 FHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSKIYD------ 260
+ +I Y AG ++A KL A M G++ VTYN+L++ Y ++S++ D
Sbjct: 517 YSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLIN---GYCKISRMEDALVLFR 573
Query: 261 QMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISG 320
+M+ +G+ PD+++Y +++ + RR A ++ + ++G + YNI+L +
Sbjct: 574 EMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNN 633
Query: 321 MVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYG 380
+ D+A +F+ + + ++ M+ A + + A+ F L +G VP+V TY
Sbjct: 634 LTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYS 693
Query: 381 TLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESC 440
+ + + LE++ +++ M NG N + +I+ + D A + ++
Sbjct: 694 LMAENLIEQGLLEELDDLFLSMEENGCTANSRMLNSIVRKLLQRGDITRAGTYLFMIDEK 753
Query: 441 GFPPDQKAKNILLSL 455
F + ++ L L
Sbjct: 754 HFSLEASTASLFLDL 768
Score = 95.5 bits (236), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 72/305 (23%), Positives = 121/305 (39%), Gaps = 43/305 (14%)
Query: 221 EKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSKI--YDQMQRAG---LQPDVVSYA 275
E AR +F + RG S N ++ + + + Y++M RAG + P++ +Y
Sbjct: 36 EDARHVFDELLRRGRGASIYGLNCALADVARHSPAAAVSRYNRMARAGADEVTPNLCTYG 95
Query: 276 LLINAYGKARREEEALA------------------------------------VFEEMLD 299
+LI + A R + A V M
Sbjct: 96 ILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTQ 155
Query: 300 AGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDR--CSPDICSYTTMLSAYVNASDM 357
G P +YNILL +A + + M D C PD+ SYTT+++ + D+
Sbjct: 156 LGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDL 215
Query: 358 EGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTI 417
+ A + + G +PNV+TY ++I K ++K ME+ M NG+ PN + +I
Sbjct: 216 DKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSI 275
Query: 418 MDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNN 477
+ Y + A+ + K+M S G PD N L+ EA ++ +
Sbjct: 276 VHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGL 335
Query: 478 EPGIN 482
+P I
Sbjct: 336 KPEIT 340
>gi|302783901|ref|XP_002973723.1| hypothetical protein SELMODRAFT_99426 [Selaginella moellendorffii]
gi|300158761|gb|EFJ25383.1| hypothetical protein SELMODRAFT_99426 [Selaginella moellendorffii]
Length = 581
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 108/374 (28%), Positives = 180/374 (48%), Gaps = 10/374 (2%)
Query: 122 MNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANK 181
M +KG+ P VV+++ ++ + G+ A + M G P TY II+ A K
Sbjct: 1 MAEKGFEPDVVTYSTIISGLCKTGKVTEALEMVEEMTEKGVNPDVATYTIIVDRLCRAGK 60
Query: 182 FKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVT 241
EA+E+F +++ S + ++ +I K E+A KL MA +G + +T
Sbjct: 61 VDEADELFHKMIERGCSA---NTVAYNALINGLCKDENIERAYKLLEEMASKGYEPDNIT 117
Query: 242 YNSLMSFETNYKEVS---KIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFE--E 296
YN+++S +VS + +D M G PDVV+Y L++A K + EA +F+ +
Sbjct: 118 YNTILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKVAEAWGLFKTMD 177
Query: 297 MLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASD 356
M D V P YN L+D F D+A +FK + PD +Y ++L S+
Sbjct: 178 MADRKVAPDLITYNTLIDGFCRVEKTDEAMKLFKDVIAKGYMPDTVTYNSILLGLARKSN 237
Query: 357 MEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTT 416
M+ AE+ F+++ G PN TY ++ G+ +V N+ + +E+Y++M P+ +
Sbjct: 238 MDEAEEMFKKMVDSGCAPNGATYSIVLSGHCRVGNMARCLELYEEMTEKRFSPDVLLCNA 297
Query: 417 IMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILL-SLAKTADERNEANELLGNFNHP 475
++D K K D A +EM G PD NILL L KT + ++A+EL
Sbjct: 298 VIDMLCKAKKVDDAHKVLEEMSKIGAVPDVVTYNILLDGLCKT-NLVDKAHELFSTMVDN 356
Query: 476 NNEPGINGLSISVD 489
P I S+ ++
Sbjct: 357 GCAPDIVSYSVVLN 370
Score = 155 bits (391), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 103/405 (25%), Positives = 184/405 (45%), Gaps = 39/405 (9%)
Query: 88 IQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRY 147
I+ N + + LI K + +A K+L M KGY P +++ ++ R G+
Sbjct: 72 IERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYEPDNITYNTILSGLCRMGKV 131
Query: 148 KNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMF 207
A+ F M S G P + Y +L + K EA +F T+ D + PD +
Sbjct: 132 SEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKVAEAWGLFKTM-DMADRKVAPDLITY 190
Query: 208 HMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLM---SFETNYKEVSKIYDQMQR 264
+ +I + + ++A KLF + +G TVTYNS++ + ++N E +++ +M
Sbjct: 191 NTLIDGFCRVEKTDEAMKLFKDVIAKGYMPDTVTYNSILLGLARKSNMDEAEEMFKKMVD 250
Query: 265 AGLQPDVVSYALLINAYG-----------------------------------KARREEE 289
+G P+ +Y+++++ + KA++ ++
Sbjct: 251 SGCAPNGATYSIVLSGHCRVGNMARCLELYEEMTEKRFSPDVLLCNAVIDMLCKAKKVDD 310
Query: 290 ALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLS 349
A V EEM G P YNILLD + +VD+A +F M + C+PDI SY+ +L+
Sbjct: 311 AHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAPDIVSYSVVLN 370
Query: 350 AYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKP 409
+ + A F R+ + VP+V+T+ L+ G K L++ ++ D M + + P
Sbjct: 371 GLCKTNKVHDARVLFDRMIERKLVPDVVTFNILMDGLCKAGKLDEAKDLLDVMSEHNVLP 430
Query: 410 NQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLS 454
+ TT+M ++K D AV ++ M G D NI+L+
Sbjct: 431 DGVTCTTLMHGLCRDKRTDEAVRLFQYMVEKGTVADVLPHNIVLA 475
Score = 138 bits (347), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 92/383 (24%), Positives = 176/383 (45%), Gaps = 20/383 (5%)
Query: 89 QSWWDFNEMD------------FLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTA 136
++W F MD + LI + + ++A K+ + KGY P V++ +
Sbjct: 168 EAWGLFKTMDMADRKVAPDLITYNTLIDGFCRVEKTDEAMKLFKDVIAKGYMPDTVTYNS 227
Query: 137 LMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEE 196
++ R AE +F++M SG P+ TY I+L E++ + ++
Sbjct: 228 ILLGLARKSNMDEAEEMFKKMVDSGCAPNGATYSIVLSGHCRVGNMARCLELYEEMTEKR 287
Query: 197 KSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVS 256
SP D + + +I M KA + A K+ M++ G VTYN L+ V
Sbjct: 288 FSP---DVLLCNAVIDMLCKAKKVDDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVD 344
Query: 257 K---IYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILL 313
K ++ M G PD+VSY++++N K + +A +F+ M++ + P +NIL+
Sbjct: 345 KAHELFSTMVDNGCAPDIVSYSVVLNGLCKTNKVHDARVLFDRMIERKLVPDVVTFNILM 404
Query: 314 DAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFV 373
D +G +D+A+ + M PD + TT++ + A + F+ + + G V
Sbjct: 405 DGLCKAGKLDEAKDLLDVMSEHNVLPDGVTCTTLMHGLCRDKRTDEAVRLFQYMVEKGTV 464
Query: 374 PNVITYGTLIKGYAKVNNLEKMMEIYDKM-RVNG-IKPNQTIFTTIMDAYGKNKDFDSAV 431
+V+ + ++ G + L + + + M + +G P+ +TT+++A + D AV
Sbjct: 465 ADVLPHNIVLAGLCREGKLAQALLFFKSMVKSDGEFSPDVVTYTTLVNALIEAGRVDQAV 524
Query: 432 VWYKEMESCGFPPDQKAKNILLS 454
++++M G PD A N L++
Sbjct: 525 DYFQQMTGSGCAPDYVAYNTLMN 547
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 101/417 (24%), Positives = 186/417 (44%), Gaps = 10/417 (2%)
Query: 70 LKQLKKWNVVSEVLEWLRIQSWWDFNE--MDFLMLITAYGKQGDFNKAEKVLSFMNKKGY 127
+ L K V+E LE + + N + +++ + G ++A+++ M ++G
Sbjct: 17 ISGLCKTGKVTEALEMVEEMTEKGVNPDVATYTIIVDRLCRAGKVDEADELFHKMIERGC 76
Query: 128 APSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEE 187
+ + V++ AL+ + + A + M S G P +TY IL K EA++
Sbjct: 77 SANTVAYNALINGLCKDENIERAYKLLEEMASKGYEPDNITYNTILSGLCRMGKVSEAKQ 136
Query: 188 VFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALM--AERGVQQSTVTYNSL 245
F ++ SP D ++ ++ K G +A LF M A+R V +TYN+L
Sbjct: 137 FFDSMPSRGYSP---DVVAYNGLLDALYKEGKVAEAWGLFKTMDMADRKVAPDLITYNTL 193
Query: 246 MSFETNYK---EVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGV 302
+ + E K++ + G PD V+Y ++ + +EA +F++M+D+G
Sbjct: 194 IDGFCRVEKTDEAMKLFKDVIAKGYMPDTVTYNSILLGLARKSNMDEAEEMFKKMVDSGC 253
Query: 303 RPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEK 362
P Y+I+L G + + +++ M R SPD+ ++ A ++ A K
Sbjct: 254 APNGATYSIVLSGHCRVGNMARCLELYEEMTEKRFSPDVLLCNAVIDMLCKAKKVDDAHK 313
Query: 363 FFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYG 422
+ + G VP+V+TY L+ G K N ++K E++ M NG P+ ++ +++
Sbjct: 314 VLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAPDIVSYSVVLNGLC 373
Query: 423 KNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEP 479
K A V + M PD NIL+ A + +EA +LL + N P
Sbjct: 374 KTNKVHDARVLFDRMIERKLVPDVVTFNILMDGLCKAGKLDEAKDLLDVMSEHNVLP 430
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 76/306 (24%), Positives = 145/306 (47%), Gaps = 8/306 (2%)
Query: 88 IQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRY 147
+ S N + ++++ + + G+ + ++ M +K ++P V+ A+++ + +
Sbjct: 249 VDSGCAPNGATYSIVLSGHCRVGNMARCLELYEEMTEKRFSPDVLLCNAVIDMLCKAKKV 308
Query: 148 KNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMF 207
+A + M G P +TY I+L + N +A E+F T++D + PD +
Sbjct: 309 DDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVD---NGCAPDIVSY 365
Query: 208 HMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLM---SFETNYKEVSKIYDQMQR 264
+++ K AR LF M ER + VT+N LM E + D M
Sbjct: 366 SVVLNGLCKTNKVHDARVLFDRMIERKLVPDVVTFNILMDGLCKAGKLDEAKDLLDVMSE 425
Query: 265 AGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQ 324
+ PD V+ L++ + +R +EA+ +F+ M++ G +NI+L G + Q
Sbjct: 426 HNVLPDGVTCTTLMHGLCRDKRTDEAVRLFQYMVEKGTVADVLPHNIVLAGLCREGKLAQ 485
Query: 325 ARTVFKCMRRD--RCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTL 382
A FK M + SPD+ +YTT+++A + A ++ A +F+++ G P+ + Y TL
Sbjct: 486 ALLFFKSMVKSDGEFSPDVVTYTTLVNALIEAGRVDQAVDYFQQMTGSGCAPDYVAYNTL 545
Query: 383 IKGYAK 388
+ G K
Sbjct: 546 MNGLRK 551
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 71/280 (25%), Positives = 131/280 (46%), Gaps = 8/280 (2%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
+I K + A KVL M+K G P VV++ L++ + A +F M +G
Sbjct: 298 VIDMLCKAKKVDDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNG 357
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
P ++Y ++L + NK +A +F +++ + L PD F++++ KAG +
Sbjct: 358 CAPDIVSYSVVLNGLCKTNKVHDARVLFDRMIERK---LVPDVVTFNILMDGLCKAGKLD 414
Query: 222 KARKLFALMAERGVQQSTVTYNSLMSFETNYK---EVSKIYDQMQRAGLQPDVVSYALLI 278
+A+ L +M+E V VT +LM K E +++ M G DV+ + +++
Sbjct: 415 EAKDLLDVMSEHNVLPDGVTCTTLMHGLCRDKRTDEAVRLFQYMVEKGTVADVLPHNIVL 474
Query: 279 NAYGKARREEEALAVFEEML--DAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDR 336
+ + +AL F+ M+ D P Y L++A +G VDQA F+ M
Sbjct: 475 AGLCREGKLAQALLFFKSMVKSDGEFSPDVVTYTTLVNALIEAGRVDQAVDYFQQMTGSG 534
Query: 337 CSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNV 376
C+PD +Y T+++ A++ + +K+ GF+ +
Sbjct: 535 CAPDYVAYNTLMNGLRKQGRHIQADRLTQAMKEKGFLSDC 574
>gi|224103961|ref|XP_002313262.1| predicted protein [Populus trichocarpa]
gi|222849670|gb|EEE87217.1| predicted protein [Populus trichocarpa]
Length = 559
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 101/395 (25%), Positives = 188/395 (47%), Gaps = 8/395 (2%)
Query: 99 FLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQ 158
+ +I K G KA + M +KG PS V++ L+ + G +A IF M
Sbjct: 153 YTCMIGGLCKDGRARKALDLFDLMTEKGEEPSTVTYNVLINGLCKEGCIGDAFKIFETML 212
Query: 159 SSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAG 218
G R ++Y ++ K EA ++F +LL E+ + ++PD F+ +I K G
Sbjct: 213 EKGKRLEVVSYNTLIMGLCNNGKLDEAMKLFSSLL-EDGNYVEPDVITFNTVIQGLCKEG 271
Query: 219 GYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSK---IYDQMQRAGLQPDVVSYA 275
+KA +++ M ERG + T + L+ + K ++ ++ + GL P +Y+
Sbjct: 272 RLDKAVEIYDTMIERGSFGNLFTCHILIGEYIKSGIIDKAMELWKRVHKLGLVPSSTTYS 331
Query: 276 LLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRD 335
++I+ + K A +F M +G+ PT YN L+ + ++QAR +F+ M+
Sbjct: 332 VMIDGFCKMHMLNFAKGLFSRMKISGLSPTLFDYNTLMASLCKESSLEQARRLFQEMKES 391
Query: 336 RCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKM 395
C PD S+ M+ + A D+ A++ ++Q G P+ TY + I +K+ +E+
Sbjct: 392 NCEPDTISFNIMIDGTLKAGDIHSAKELLNDMQQMGLTPDAYTYSSFINRLSKLGQMEEA 451
Query: 396 MEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSL 455
+D M +GI P+ ++ +++ +G N + + + ++M G D + N +L+
Sbjct: 452 KGAFDSMIASGITPDNHVYDSLIKGFGLNDEIEEVINLLRQMADMGVILDLEITNSILTF 511
Query: 456 AKTADERNEANELLGNFNHPNNEPGINGLSISVDE 490
+ E ELL NF+ ++ G SIS D+
Sbjct: 512 LCNSAEHLHVMELLPNFSSESS----GGTSISCDK 542
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 100/395 (25%), Positives = 187/395 (47%), Gaps = 8/395 (2%)
Query: 90 SWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKN 149
S + N + +L+ K+G +A ++L M +KG VV ++ L+ + G
Sbjct: 39 SSCEPNSFTYCILMDGLCKEGRVEEAMRLLGEMKRKGLEVDVVVYSTLISGFCSKGCLDR 98
Query: 150 AEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHM 209
+A+F M G P+ + Y ++ F + ++EA V T+ + ++PD +
Sbjct: 99 GKALFDEMLEKGISPNVVVYSCLINGFCKKGLWREATAVLHTMTER---GIQPDVYTYTC 155
Query: 210 MIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSL---MSFETNYKEVSKIYDQMQRAG 266
MI K G KA LF LM E+G + STVTYN L + E + KI++ M G
Sbjct: 156 MIGGLCKDGRARKALDLFDLMTEKGEEPSTVTYNVLINGLCKEGCIGDAFKIFETMLEKG 215
Query: 267 LQPDVVSYALLINAYGKARREEEALAVFEEMLDAG--VRPTHKAYNILLDAFAISGMVDQ 324
+ +VVSY LI + +EA+ +F +L+ G V P +N ++ G +D+
Sbjct: 216 KRLEVVSYNTLIMGLCNNGKLDEAMKLFSSLLEDGNYVEPDVITFNTVIQGLCKEGRLDK 275
Query: 325 ARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIK 384
A ++ M ++ + ++ Y+ + ++ A + ++R+ + G VP+ TY +I
Sbjct: 276 AVEIYDTMIERGSFGNLFTCHILIGEYIKSGIIDKAMELWKRVHKLGLVPSSTTYSVMID 335
Query: 385 GYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPP 444
G+ K++ L ++ +M+++G+ P + T+M + K + A ++EM+ P
Sbjct: 336 GFCKMHMLNFAKGLFSRMKISGLSPTLFDYNTLMASLCKESSLEQARRLFQEMKESNCEP 395
Query: 445 DQKAKNILLSLAKTADERNEANELLGNFNHPNNEP 479
D + NI++ A + + A ELL + P
Sbjct: 396 DTISFNIMIDGTLKAGDIHSAKELLNDMQQMGLTP 430
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 89/338 (26%), Positives = 163/338 (48%), Gaps = 10/338 (2%)
Query: 122 MNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANK 181
M + P +VS+ ++ + R + A + M+ S P++ TY I++ + +
Sbjct: 1 MKRINILPDIVSYNTIINGLCKEKRLEKAVDLLVEMEGSSCEPNSFTYCILMDGLCKEGR 60
Query: 182 FKEAEEVFMTLLDE-EKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTV 240
+EA M LL E ++ L+ D ++ +I + G ++ + LF M E+G+ + V
Sbjct: 61 VEEA----MRLLGEMKRKGLEVDVVVYSTLISGFCSKGCLDRGKALFDEMLEKGISPNVV 116
Query: 241 TYNSLMSFETN---YKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEM 297
Y+ L++ ++E + + M G+QPDV +Y +I K R +AL +F+ M
Sbjct: 117 VYSCLINGFCKKGLWREATAVLHTMTERGIQPDVYTYTCMIGGLCKDGRARKALDLFDLM 176
Query: 298 LDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDM 357
+ G P+ YN+L++ G + A +F+ M ++ SY T++ N +
Sbjct: 177 TEKGEEPSTVTYNVLINGLCKEGCIGDAFKIFETMLEKGKRLEVVSYNTLIMGLCNNGKL 236
Query: 358 EGAEKFFRRLKQDG-FV-PNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFT 415
+ A K F L +DG +V P+VIT+ T+I+G K L+K +EIYD M G N
Sbjct: 237 DEAMKLFSSLLEDGNYVEPDVITFNTVIQGLCKEGRLDKAVEIYDTMIERGSFGNLFTCH 296
Query: 416 TIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILL 453
++ Y K+ D A+ +K + G P ++++
Sbjct: 297 ILIGEYIKSGIIDKAMELWKRVHKLGLVPSSTTYSVMI 334
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 91/193 (47%)
Query: 262 MQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGM 321
M+R + PD+VSY +IN K +R E+A+ + EM + P Y IL+D G
Sbjct: 1 MKRINILPDIVSYNTIINGLCKEKRLEKAVDLLVEMEGSSCEPNSFTYCILMDGLCKEGR 60
Query: 322 VDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGT 381
V++A + M+R D+ Y+T++S + + ++ + F + + G PNV+ Y
Sbjct: 61 VEEAMRLLGEMKRKGLEVDVVVYSTLISGFCSKGCLDRGKALFDEMLEKGISPNVVVYSC 120
Query: 382 LIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCG 441
LI G+ K + + M GI+P+ +T ++ K+ A+ + M G
Sbjct: 121 LINGFCKKGLWREATAVLHTMTERGIQPDVYTYTCMIGGLCKDGRARKALDLFDLMTEKG 180
Query: 442 FPPDQKAKNILLS 454
P N+L++
Sbjct: 181 EEPSTVTYNVLIN 193
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 54/246 (21%), Positives = 109/246 (44%), Gaps = 9/246 (3%)
Query: 240 VTYNSLMSFETNYKEVSKIYD---QMQRAGLQPDVVSYALLINAYGKARREEEALAVFEE 296
V+YN++++ K + K D +M+ + +P+ +Y +L++ K R EEA+ + E
Sbjct: 11 VSYNTIINGLCKEKRLEKAVDLLVEMEGSSCEPNSFTYCILMDGLCKEGRVEEAMRLLGE 70
Query: 297 MLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASD 356
M G+ Y+ L+ F G +D+ + +F M SP++ Y+ +++ +
Sbjct: 71 MKRKGLEVDVVVYSTLISGFCSKGCLDRGKALFDEMLEKGISPNVVVYSCLINGFCKKGL 130
Query: 357 MEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTT 416
A + + G P+V TY +I G K K ++++D M G +P+ +
Sbjct: 131 WREATAVLHTMTERGIQPDVYTYTCMIGGLCKDGRARKALDLFDLMTEKGEEPSTVTYNV 190
Query: 417 IMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELL------G 470
+++ K A ++ M G + + N L+ + +EA +L G
Sbjct: 191 LINGLCKEGCIGDAFKIFETMLEKGKRLEVVSYNTLIMGLCNNGKLDEAMKLFSSLLEDG 250
Query: 471 NFNHPN 476
N+ P+
Sbjct: 251 NYVEPD 256
>gi|297842227|ref|XP_002888995.1| hypothetical protein ARALYDRAFT_476621 [Arabidopsis lyrata subsp.
lyrata]
gi|297334836|gb|EFH65254.1| hypothetical protein ARALYDRAFT_476621 [Arabidopsis lyrata subsp.
lyrata]
Length = 863
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 98/381 (25%), Positives = 179/381 (46%), Gaps = 5/381 (1%)
Query: 76 WNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHT 135
W + ++++ Q W NE + ++I+ G++G +K +V M +G + SV S+T
Sbjct: 121 WQRSLRLFKYMQRQIWCKPNEHIYTIMISLLGREGLLDKCLEVFDEMPSQGVSRSVFSYT 180
Query: 136 ALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDE 195
AL+ AYGR GRY+ + + RM++ PS LTY ++ + E + +
Sbjct: 181 ALINAYGRNGRYETSLELLDRMKNDKISPSILTYNTVINACARGGL--DWEGLLGLFAEM 238
Query: 196 EKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEV 255
++PD ++ ++ G ++A +F M + G+ TY+ L+ + +
Sbjct: 239 RHEGIQPDIVTYNTLLSACAIRGLGDEAEMVFRTMNDGGIVPDLTTYSHLVETFGKLRRL 298
Query: 256 SKIYD---QMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNIL 312
K+ D +M G PD+ SY +L+ AY K+ +EA+ VF +M AG P Y++L
Sbjct: 299 EKVSDLLSEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVL 358
Query: 313 LDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGF 372
L+ F SG D R +F M+ PD +Y ++ + + F + ++
Sbjct: 359 LNLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEENI 418
Query: 373 VPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVV 432
P++ TY +I K E +I M N I P+ +T +++A+G+ ++ A+V
Sbjct: 419 EPDMETYEGIIFACGKGGLHEDARKILQYMTANDIVPSSKAYTGVIEAFGQAALYEEALV 478
Query: 433 WYKEMESCGFPPDQKAKNILL 453
+ M G P + + LL
Sbjct: 479 AFNTMHEVGSNPSIETYHSLL 499
Score = 142 bits (357), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 94/399 (23%), Positives = 185/399 (46%), Gaps = 8/399 (2%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
L++A +G ++AE V MN G P + +++ L+E +G+ R + + M S G
Sbjct: 253 LLSACAIRGLGDEAEMVFRTMNDGGIVPDLTTYSHLVETFGKLRRLEKVSDLLSEMASGG 312
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
P +Y ++L+ + ++ KEA VF + + + P+ + +++ ++ ++G Y+
Sbjct: 313 SLPDITSYNVLLEAYAKSGSIKEAMGVFHQM---QAAGCTPNANTYSVLLNLFGQSGRYD 369
Query: 222 KARKLFALMAERGVQQSTVTYNSLMSF--ETNY-KEVSKIYDQMQRAGLQPDVVSYALLI 278
R+LF M TYN L+ E Y KEV ++ M ++PD+ +Y +I
Sbjct: 370 DVRQLFLEMKSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEENIEPDMETYEGII 429
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCS 338
A GK E+A + + M + P+ KAY +++AF + + ++A F M +
Sbjct: 430 FACGKGGLHEDARKILQYMTANDIVPSSKAYTGVIEAFGQAALYEEALVAFNTMHEVGSN 489
Query: 339 PDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEI 398
P I +Y ++L ++ ++ +E RL G N T+ I+ Y + E+ ++
Sbjct: 490 PSIETYHSLLYSFARGGLVKESEAILSRLVDSGIPRNRDTFNAQIEAYKQGGKFEEAVKT 549
Query: 399 YDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKT 458
Y M + P++ ++ Y + D ++EM++ P ++L++
Sbjct: 550 YVDMEKSRCDPDERTLEAVLSVYSFARLVDECREQFEEMKASDILPSIMCYCMMLAVYGK 609
Query: 459 ADERNEANELLGNF--NHPNNEPGINGLSISVDEEDDDD 495
+ ++ NELL N +N + G I D +DD +
Sbjct: 610 TERWDDVNELLEEMLSNRVSNIHQVIGQMIKGDYDDDSN 648
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 87/351 (24%), Positives = 168/351 (47%), Gaps = 16/351 (4%)
Query: 145 GRYK-NAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSP---- 199
G+Y + E++ ++ S PR S I K + N F + F D ++S
Sbjct: 70 GKYSYDVESLINKLSSLPPRGSIARCLDIFKNKLSLNDFALVFKEFAGRGDWQRSLRLFK 129
Query: 200 -------LKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLM-SFETN 251
KP++ ++ +MI + + G +K ++F M +GV +S +Y +L+ ++ N
Sbjct: 130 YMQRQIWCKPNEHIYTIMISLLGREGLLDKCLEVFDEMPSQGVSRSVFSYTALINAYGRN 189
Query: 252 --YKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEAL-AVFEEMLDAGVRPTHKA 308
Y+ ++ D+M+ + P +++Y +INA + + E L +F EM G++P
Sbjct: 190 GRYETSLELLDRMKNDKISPSILTYNTVINACARGGLDWEGLLGLFAEMRHEGIQPDIVT 249
Query: 309 YNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLK 368
YN LL A AI G+ D+A VF+ M PD+ +Y+ ++ + +E +
Sbjct: 250 YNTLLSACAIRGLGDEAEMVFRTMNDGGIVPDLTTYSHLVETFGKLRRLEKVSDLLSEMA 309
Query: 369 QDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFD 428
G +P++ +Y L++ YAK ++++ M ++ +M+ G PN ++ +++ +G++ +D
Sbjct: 310 SGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGRYD 369
Query: 429 SAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEP 479
+ EM+S PD NIL+ + E L + N EP
Sbjct: 370 DVRQLFLEMKSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEENIEP 420
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 98/408 (24%), Positives = 189/408 (46%), Gaps = 39/408 (9%)
Query: 99 FLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGR-YKNAEAIFRRM 157
+ LI AYG+ G + + ++L M +PS++++ ++ A RGG ++ +F M
Sbjct: 179 YTALINAYGRNGRYETSLELLDRMKNDKISPSILTYNTVINACARGGLDWEGLLGLFAEM 238
Query: 158 QSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLD----------------------- 194
+ G +P +TY +L EAE VF T+ D
Sbjct: 239 RHEGIQPDIVTYNTLLSACAIRGLGDEAEMVFRTMNDGGIVPDLTTYSHLVETFGKLRRL 298
Query: 195 EEKSPLK---------PDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSL 245
E+ S L PD +++++ Y K+G ++A +F M G + TY+ L
Sbjct: 299 EKVSDLLSEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVL 358
Query: 246 MSF---ETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGV 302
++ Y +V +++ +M+ + PD +Y +LI +G+ +E + +F +M++ +
Sbjct: 359 LNLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEENI 418
Query: 303 RPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEK 362
P + Y ++ A G+ + AR + + M + P +YT ++ A+ A+ E A
Sbjct: 419 EPDMETYEGIIFACGKGGLHEDARKILQYMTANDIVPSSKAYTGVIEAFGQAALYEEALV 478
Query: 363 FFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYG 422
F + + G P++ TY +L+ +A+ +++ I ++ +GI N+ F ++AY
Sbjct: 479 AFNTMHEVGSNPSIETYHSLLYSFARGGLVKESEAILSRLVDSGIPRNRDTFNAQIEAYK 538
Query: 423 KNKDFDSAVVWYKEMESCGFPPDQKAKNILLSL---AKTADERNEANE 467
+ F+ AV Y +ME PD++ +LS+ A+ DE E E
Sbjct: 539 QGGKFEEAVKTYVDMEKSRCDPDERTLEAVLSVYSFARLVDECREQFE 586
Score = 108 bits (269), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 74/366 (20%), Positives = 156/366 (42%), Gaps = 44/366 (12%)
Query: 98 DFLMLITAYGKQGDFNKAEKVLSFMNKKGYA-PSVVSHTALMEAYGRGGRYKNAEAIFRR 156
DF ++ + +GD+ ++ ++ +M ++ + P+ +T ++ GR G +F
Sbjct: 107 DFALVFKEFAGRGDWQRSLRLFKYMQRQIWCKPNEHIYTIMISLLGREGLLDKCLEVFDE 166
Query: 157 MQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKK 216
M S G S +Y +I Y +
Sbjct: 167 MPSQGVSRSVFSYT--------------------------------------ALINAYGR 188
Query: 217 AGGYEKARKLFALMAERGVQQSTVTYNSLMSFET----NYKEVSKIYDQMQRAGLQPDVV 272
G YE + +L M + S +TYN++++ +++ + ++ +M+ G+QPD+V
Sbjct: 189 NGRYETSLELLDRMKNDKISPSILTYNTVINACARGGLDWEGLLGLFAEMRHEGIQPDIV 248
Query: 273 SYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCM 332
+Y L++A +EA VF M D G+ P Y+ L++ F +++ + M
Sbjct: 249 TYNTLLSACAIRGLGDEAEMVFRTMNDGGIVPDLTTYSHLVETFGKLRRLEKVSDLLSEM 308
Query: 333 RRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNL 392
PDI SY +L AY + ++ A F +++ G PN TY L+ + +
Sbjct: 309 ASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGRY 368
Query: 393 EKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKA-KNI 451
+ + +++ +M+ + P+ + +++ +G+ F V + +M PD + + I
Sbjct: 369 DDVRQLFLEMKSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEENIEPDMETYEGI 428
Query: 452 LLSLAK 457
+ + K
Sbjct: 429 IFACGK 434
>gi|22531122|gb|AAM97065.1| putative membrane-associated salt-inducible protein [Arabidopsis
thaliana]
gi|62320656|dbj|BAD95323.1| putative membrane-associated salt-inducible protein [Arabidopsis
thaliana]
Length = 596
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 103/410 (25%), Positives = 203/410 (49%), Gaps = 18/410 (4%)
Query: 53 TRGQPLPKDLVLGTLVR-LKQLKKWNVVSEVLEWLR----IQSWWDFNEMDFLMLITAYG 107
+ +PLP + L+ + ++KK++VV + E ++ + + +N +LI +
Sbjct: 39 VKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYN-----ILINCFC 93
Query: 108 KQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSAL 167
++ + A +L M K GY PS+V+ ++L+ Y G R +A A+ +M G RP +
Sbjct: 94 RRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTI 153
Query: 168 TYQIILKLFVEANKFKEAEEVFMTLLDEE-KSPLKPDQKMFHMMIYMYKKAGGYEKARKL 226
T+ ++ NK EA + L+D + +P+ + +++ K G + A L
Sbjct: 154 TFTTLIHGLFLHNKASEA----VALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNL 209
Query: 227 FALMAERGVQQSTVTYNSLMSFETNYKEVS---KIYDQMQRAGLQPDVVSYALLINAYGK 283
M ++ V +N+++ Y+ V ++ +M+ G++P+VV+Y+ LI+
Sbjct: 210 LNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCS 269
Query: 284 ARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICS 343
R +A + +M++ + P +N L+DAF G +A ++ M + PDI +
Sbjct: 270 YGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFT 329
Query: 344 YTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMR 403
Y ++++ + ++ A++ F + P+V+TY TLIKG+ K +E E++ +M
Sbjct: 330 YNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMS 389
Query: 404 VNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILL 453
G+ + +TT++ + D D+A +K+M S G PPD +ILL
Sbjct: 390 HRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILL 439
Score = 149 bits (375), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 96/350 (27%), Positives = 169/350 (48%), Gaps = 6/350 (1%)
Query: 99 FLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQ 158
F +I + K + A + M KG P+VV++++L+ GR+ +A + M
Sbjct: 225 FNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMI 284
Query: 159 SSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAG 218
P+ +T+ ++ FV+ KF EAE+++ ++ K + PD ++ ++ +
Sbjct: 285 EKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMI---KRSIDPDIFTYNSLVNGFCMHD 341
Query: 219 GYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEV---SKIYDQMQRAGLQPDVVSYA 275
+KA+++F M + VTYN+L+ K V ++++ +M GL D V+Y
Sbjct: 342 RLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYT 401
Query: 276 LLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRD 335
LI + A VF++M+ GV P Y+ILLD +G +++A VF M++
Sbjct: 402 TLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKS 461
Query: 336 RCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKM 395
DI YTTM+ A ++ F L G PNV+TY T+I G L++
Sbjct: 462 EIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEA 521
Query: 396 MEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPD 445
+ KM+ +G PN + T++ A+ ++ D ++ +EM SC F D
Sbjct: 522 YALLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGD 571
Score = 101 bits (252), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 73/325 (22%), Positives = 142/325 (43%), Gaps = 8/325 (2%)
Query: 149 NAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDE-EKSPLKPDQKMF 207
+A +F M S P PS + + +L + KF +V ++L ++ ++ + +
Sbjct: 30 DAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKF----DVVISLGEKMQRLEIVHGLYTY 85
Query: 208 HMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVS---KIYDQMQR 264
+++I + + A L M + G + S VT +SL++ + K +S + DQM
Sbjct: 86 NILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVE 145
Query: 265 AGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQ 324
G +PD +++ LI+ + EA+A+ + M+ G +P Y ++++ G D
Sbjct: 146 MGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDL 205
Query: 325 ARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIK 384
A + M + D+ + T++ + ++ A F+ ++ G PNV+TY +LI
Sbjct: 206 ALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLIS 265
Query: 385 GYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPP 444
++ M I PN F ++DA+ K F A Y +M P
Sbjct: 266 CLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDP 325
Query: 445 DQKAKNILLSLAKTADERNEANELL 469
D N L++ D ++A ++
Sbjct: 326 DIFTYNSLVNGFCMHDRLDKAKQMF 350
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 67/270 (24%), Positives = 125/270 (46%), Gaps = 3/270 (1%)
Query: 223 ARKLFALMAERGVQQSTVTYNSLMSFETNYKE---VSKIYDQMQRAGLQPDVVSYALLIN 279
A LF M + S V +N L+S K+ V + ++MQR + + +Y +LIN
Sbjct: 31 AIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNILIN 90
Query: 280 AYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSP 339
+ + + ALA+ +M+ G P+ + LL+ + + A + M P
Sbjct: 91 CFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRP 150
Query: 340 DICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIY 399
D ++TT++ + A R+ Q G PN++TYG ++ G K + + + +
Sbjct: 151 DTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLL 210
Query: 400 DKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTA 459
+KM I+ + IF TI+D+ K + D A+ +KEME+ G P+ + L+S +
Sbjct: 211 NKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSY 270
Query: 460 DERNEANELLGNFNHPNNEPGINGLSISVD 489
++A++LL + P + + +D
Sbjct: 271 GRWSDASQLLSDMIEKKINPNLVTFNALID 300
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 38/182 (20%), Positives = 80/182 (43%), Gaps = 1/182 (0%)
Query: 288 EEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTM 347
++A+ +F M+ + P+ +N LL A A D ++ + M+R + +Y +
Sbjct: 29 DDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNIL 88
Query: 348 LSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGI 407
++ + S + A ++ + G+ P+++T +L+ GY + + + D+M G
Sbjct: 89 INCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGY 148
Query: 408 KPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLS-LAKTADERNEAN 466
+P+ FTT++ + AV M G P+ ++++ L K D N
Sbjct: 149 RPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALN 208
Query: 467 EL 468
L
Sbjct: 209 LL 210
Score = 48.1 bits (113), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 33/168 (19%), Positives = 68/168 (40%)
Query: 322 VDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGT 381
+D A +F M + R P I + +LSA + ++++ V + TY
Sbjct: 28 LDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNI 87
Query: 382 LIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCG 441
LI + + + + + + KM G +P+ +++++ Y K AV +M G
Sbjct: 88 LINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMG 147
Query: 442 FPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGINGLSISVD 489
+ PD L+ ++ +EA L+ +P + + V+
Sbjct: 148 YRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVN 195
>gi|242050480|ref|XP_002462984.1| hypothetical protein SORBIDRAFT_02g035800 [Sorghum bicolor]
gi|241926361|gb|EER99505.1| hypothetical protein SORBIDRAFT_02g035800 [Sorghum bicolor]
Length = 668
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 97/346 (28%), Positives = 176/346 (50%), Gaps = 9/346 (2%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
LI+A+ + + A ++L+ G P + TAL+ A G GR AEA+F +G
Sbjct: 234 LISAFARAALPDAALELLASAQAIGLTPRSNAVTALISALGSAGRVAEAEALFLEFFLAG 293
Query: 162 P-RPSALTYQIILKLFVEANKFKEAEEVFMTLLDE-EKSPLKPDQKMFHMMIYMYKKAGG 219
+P Y +LK +V K AE+V LDE + + PD+ + +++ Y +AG
Sbjct: 294 EIKPRTRAYNALLKGYVRIGSLKNAEQV----LDEMSQCGVAPDEATYSLLVDAYTRAGR 349
Query: 220 YEKARKLFALMAERGVQQSTVTYNSLMSF---ETNYKEVSKIYDQMQRAGLQPDVVSYAL 276
+E AR L M GV+ S+ ++ +++ ++++ + +MQ +G++PD Y +
Sbjct: 350 WESARILLKEMEADGVKPSSYVFSRILAGFRDRGDWQKAFAVLREMQASGVRPDRHFYNV 409
Query: 277 LINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDR 336
+I+ +GK A+ F+ M + + P +N L+DA G D+A +F+ MR
Sbjct: 410 MIDTFGKYNCLGHAMDAFDRMREEEIEPDVVTWNTLIDAHCKGGRHDRAMELFEEMRESN 469
Query: 337 CSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMM 396
C P +Y M++ EG E +K+ G VPN+ITY TL+ Y + ++ +
Sbjct: 470 CPPGTTTYNIMINLLGEQERWEGVEAMLSEMKEQGLVPNIITYTTLVDVYGRSGRYKEAI 529
Query: 397 EIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGF 442
+ + M+ +G+KP+ T++ +++AY + D A+ K M++ G
Sbjct: 530 DCIEAMKADGLKPSPTMYHALVNAYAQRGLADHALNVVKAMKADGL 575
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 94/356 (26%), Positives = 180/356 (50%), Gaps = 6/356 (1%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
L+ Y + G AE+VL M++ G AP +++ L++AY R GR+++A + + M++ G
Sbjct: 305 LLKGYVRIGSLKNAEQVLDEMSQCGVAPDEATYSLLVDAYTRAGRWESARILLKEMEADG 364
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
+PS+ + IL F + +++A F L + + S ++PD+ +++MI + K
Sbjct: 365 VKPSSYVFSRILAGFRDRGDWQKA---FAVLREMQASGVRPDRHFYNVMIDTFGKYNCLG 421
Query: 222 KARKLFALMAERGVQQSTVTYNSLMSFETN---YKEVSKIYDQMQRAGLQPDVVSYALLI 278
A F M E ++ VT+N+L+ + +++++M+ + P +Y ++I
Sbjct: 422 HAMDAFDRMREEEIEPDVVTWNTLIDAHCKGGRHDRAMELFEEMRESNCPPGTTTYNIMI 481
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCS 338
N G+ R E A+ EM + G+ P Y L+D + SG +A + M+ D
Sbjct: 482 NLLGEQERWEGVEAMLSEMKEQGLVPNIITYTTLVDVYGRSGRYKEAIDCIEAMKADGLK 541
Query: 339 PDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEI 398
P Y +++AY + A + +K DG +++ +LI + + + + +
Sbjct: 542 PSPTMYHALVNAYAQRGLADHALNVVKAMKADGLEVSILVLNSLINAFGEDRRVVEAFSV 601
Query: 399 YDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLS 454
M+ NG++P+ +TT+M A + + FD V Y+EM + G PD+KA+ +L S
Sbjct: 602 LQFMKENGLRPDVITYTTLMKALIRVEQFDKVPVIYEEMITSGCAPDRKARAMLRS 657
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 90/320 (28%), Positives = 169/320 (52%), Gaps = 6/320 (1%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
+E + +L+ AY + G + A +L M G PS + ++ + G ++ A A+
Sbjct: 333 DEATYSLLVDAYTRAGRWESARILLKEMEADGVKPSSYVFSRILAGFRDRGDWQKAFAVL 392
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
R MQ+SG RP Y +++ F + N A + F + +EE ++PD ++ +I +
Sbjct: 393 REMQASGVRPDRHFYNVMIDTFGKYNCLGHAMDAFDRMREEE---IEPDVVTWNTLIDAH 449
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYN---SLMSFETNYKEVSKIYDQMQRAGLQPDV 271
K G +++A +LF M E T TYN +L+ + ++ V + +M+ GL P++
Sbjct: 450 CKGGRHDRAMELFEEMRESNCPPGTTTYNIMINLLGEQERWEGVEAMLSEMKEQGLVPNI 509
Query: 272 VSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKC 331
++Y L++ YG++ R +EA+ E M G++P+ Y+ L++A+A G+ D A V K
Sbjct: 510 ITYTTLVDVYGRSGRYKEAIDCIEAMKADGLKPSPTMYHALVNAYAQRGLADHALNVVKA 569
Query: 332 MRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNN 391
M+ D I ++++A+ + A + +K++G P+VITY TL+K +V
Sbjct: 570 MKADGLEVSILVLNSLINAFGEDRRVVEAFSVLQFMKENGLRPDVITYTTLMKALIRVEQ 629
Query: 392 LEKMMEIYDKMRVNGIKPNQ 411
+K+ IY++M +G P++
Sbjct: 630 FDKVPVIYEEMITSGCAPDR 649
Score = 105 bits (261), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 74/296 (25%), Positives = 138/296 (46%), Gaps = 4/296 (1%)
Query: 164 PSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKA 223
P +Y +L + +A + L D +S L+PD +F +I + +A + A
Sbjct: 188 PDLASYSHLLASLLNTRDPPDAALLERLLGDLRESRLEPDAPLFSDLISAFARAALPDAA 247
Query: 224 RKLFALMAERGVQQSTVTYNSLMSFETNYKEVSK---IYDQMQRAG-LQPDVVSYALLIN 279
+L A G+ + +L+S + V++ ++ + AG ++P +Y L+
Sbjct: 248 LELLASAQAIGLTPRSNAVTALISALGSAGRVAEAEALFLEFFLAGEIKPRTRAYNALLK 307
Query: 280 AYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSP 339
Y + + A V +EM GV P Y++L+DA+ +G + AR + K M D P
Sbjct: 308 GYVRIGSLKNAEQVLDEMSQCGVAPDEATYSLLVDAYTRAGRWESARILLKEMEADGVKP 367
Query: 340 DICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIY 399
++ +L+ + + D + A R ++ G P+ Y +I + K N L M+ +
Sbjct: 368 SSYVFSRILAGFRDRGDWQKAFAVLREMQASGVRPDRHFYNVMIDTFGKYNCLGHAMDAF 427
Query: 400 DKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSL 455
D+MR I+P+ + T++DA+ K D A+ ++EM PP NI+++L
Sbjct: 428 DRMREEEIEPDVVTWNTLIDAHCKGGRHDRAMELFEEMRESNCPPGTTTYNIMINL 483
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 108/218 (49%), Gaps = 6/218 (2%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
LI A+ K G ++A ++ M + P ++ ++ G R++ EA+ M+ G
Sbjct: 445 LIDAHCKGGRHDRAMELFEEMRESNCPPGTTTYNIMINLLGEQERWEGVEAMLSEMKEQG 504
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
P+ +TY ++ ++ + ++KEA + + + LKP M+H ++ Y + G +
Sbjct: 505 LVPNIITYTTLVDVYGRSGRYKEAIDCIEAM---KADGLKPSPTMYHALVNAYAQRGLAD 561
Query: 222 KARKLFALMAERGVQQSTVTYNSLM-SFETNYK--EVSKIYDQMQRAGLQPDVVSYALLI 278
A + M G++ S + NSL+ +F + + E + M+ GL+PDV++Y L+
Sbjct: 562 HALNVVKAMKADGLEVSILVLNSLINAFGEDRRVVEAFSVLQFMKENGLRPDVITYTTLM 621
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAF 316
A + + ++ ++EEM+ +G P KA +L A
Sbjct: 622 KALIRVEQFDKVPVIYEEMITSGCAPDRKARAMLRSAL 659
>gi|60390261|sp|Q76C99.1|RF1_ORYSI RecName: Full=Protein Rf1, mitochondrial; AltName: Full=Fertility
restorer; AltName: Full=Protein PPR; AltName:
Full=Restorer for CMS; Flags: Precursor
gi|33859440|dbj|BAC77665.2| PPR protein [Oryza sativa Indica Group]
gi|33859442|dbj|BAC77666.2| Rf1 [Oryza sativa Indica Group]
gi|41152689|dbj|BAD08214.1| fertility restorer [Oryza sativa Indica Group]
gi|46091159|dbj|BAD13708.1| PPR protein [Oryza sativa Indica Group]
gi|47550657|dbj|BAD20283.1| restorer for CMS [Oryza sativa Indica Group]
Length = 791
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 111/433 (25%), Positives = 196/433 (45%), Gaps = 54/433 (12%)
Query: 68 VRLKQLKKWNVVSEVLEWLRIQS-----WWDFNEMDFLMLITAYGKQGD----------- 111
+ LK L N E LE L + + + + + +I + K+GD
Sbjct: 163 ILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFKEGDSDKAYSTYHEM 222
Query: 112 ------------------------FNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRY 147
+KA +VL+ M K G P +++ +++ Y G+
Sbjct: 223 LDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQP 282
Query: 148 KNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMF 207
K A ++M+S G P +TY +++ + + EA ++F ++ K LKP+ +
Sbjct: 283 KEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSM---TKRGLKPEITTY 339
Query: 208 HMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSK---IYDQMQR 264
++ Y G + L LM G+ ++ L+ +V + ++ +M++
Sbjct: 340 GTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYAKQGKVDQAMLVFSKMRQ 399
Query: 265 AGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQ 324
GL P+ V+Y +I K+ R E+A+ FE+M+D G+ P + YN L+ ++
Sbjct: 400 QGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWER 459
Query: 325 ARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEG----AEKFFRRLKQDGFVPNVITYG 380
A + M DR IC T ++ +++ EG +EK F + + G PNVITY
Sbjct: 460 AEELILEM-LDR---GICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYN 515
Query: 381 TLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESC 440
TLI GY +++ M++ M G+KPN ++T+++ Y K + A+V +KEMES
Sbjct: 516 TLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESS 575
Query: 441 GFPPDQKAKNILL 453
G PD NI+L
Sbjct: 576 GVSPDIITYNIIL 588
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 92/390 (23%), Positives = 175/390 (44%), Gaps = 41/390 (10%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
+I A K +KA +VL+ M K G P +++ +++ Y G+ K A ++M+S G
Sbjct: 237 IIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDG 296
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
P +TY +++ + + EA ++F ++ K LKP+ + ++ Y G
Sbjct: 297 VEPDVVTYSLLMDYLCKNGRCMEARKIFDSM---TKRGLKPEITTYGTLLQGYATKGALV 353
Query: 222 KARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSK---IYDQMQRAGLQPDVVSYALLI 278
+ L LM G+ ++ L+ +V + ++ +M++ GL P+ V+Y +I
Sbjct: 354 EMHGLLDLMVRNGIHPDHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVI 413
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILL------------------------- 313
K+ R E+A+ FE+M+D G+ P + YN L+
Sbjct: 414 GILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGIC 473
Query: 314 ----------DAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKF 363
D+ G V ++ +F+ M R P++ +Y T+++ Y A M+ A K
Sbjct: 474 LNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKL 533
Query: 364 FRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGK 423
+ G PN +TY TLI GY K++ +E + ++ +M +G+ P+ + I+ +
Sbjct: 534 LSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQ 593
Query: 424 NKDFDSAVVWYKEMESCGFPPDQKAKNILL 453
+ +A Y + G + NI+L
Sbjct: 594 TRRTAAAKELYVRITESGTQIELSTYNIIL 623
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 99/378 (26%), Positives = 176/378 (46%), Gaps = 12/378 (3%)
Query: 111 DFNKAEKVLSFMN------KKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRP 164
D N++++ L ++ G P VVS+T ++ + + G A + + M G P
Sbjct: 170 DENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRGILP 229
Query: 165 SALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKAR 224
+TY I+ +A +A EV T++ K+ + PD ++ +++ Y +G ++A
Sbjct: 230 DVVTYNSIIAALCKAQAMDKAMEVLNTMV---KNGVMPDCMTYNSILHGYCSSGQPKEAI 286
Query: 225 KLFALMAERGVQQSTVTYNSLMSFETN---YKEVSKIYDQMQRAGLQPDVVSYALLINAY 281
M GV+ VTY+ LM + E KI+D M + GL+P++ +Y L+ Y
Sbjct: 287 GFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGY 346
Query: 282 GKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDI 341
E + + M+ G+ P H ++IL+ A+A G VDQA VF MR+ +P+
Sbjct: 347 ATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPNA 406
Query: 342 CSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDK 401
+Y ++ + +E A +F ++ +G P I Y +LI G N E+ E+ +
Sbjct: 407 VTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILE 466
Query: 402 MRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADE 461
M GI N F +I+D++ K + ++ M G P+ N L++ A +
Sbjct: 467 MLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGK 526
Query: 462 RNEANELLGNFNHPNNEP 479
+EA +LL +P
Sbjct: 527 MDEAMKLLSGMVSVGLKP 544
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 93/346 (26%), Positives = 153/346 (44%), Gaps = 33/346 (9%)
Query: 101 MLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNA-EAIFRRMQS 159
+LI + G + L + KKG+ ++ T L++ R +A + + RRM
Sbjct: 92 ILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTE 151
Query: 160 SGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGG 219
G P+ +Y I+LK + N+ +EA E+ + D+ PD + +I + K G
Sbjct: 152 LGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFKEGD 211
Query: 220 YEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSKIYDQMQRAGLQPDVVSYALLIN 279
+KA + M +RG+ PDVV+Y +I
Sbjct: 212 SDKAYSTYHEMLDRGIL--------------------------------PDVVTYNSIIA 239
Query: 280 AYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSP 339
A KA+ ++A+ V M+ GV P YN +L + SG +A K MR D P
Sbjct: 240 ALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEP 299
Query: 340 DICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIY 399
D+ +Y+ ++ A K F + + G P + TYGTL++GYA L +M +
Sbjct: 300 DVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLL 359
Query: 400 DKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPD 445
D M NGI P+ +F+ ++ AY K D A++ + +M G P+
Sbjct: 360 DLMVRNGIHPDHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPN 405
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 83/347 (23%), Positives = 166/347 (47%), Gaps = 6/347 (1%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
L+ Y +G + +L M + G P + L+ AY + G+ A +F +M+ G
Sbjct: 342 LLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYAKQGKVDQAMLVFSKMRQQG 401
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
P+A+TY ++ + ++ + ++A F ++DE L P +++ +I+ +E
Sbjct: 402 LNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDE---GLSPGNIVYNSLIHGLCTCNKWE 458
Query: 222 KARKLFALMAERGVQQSTVTYNSLM---SFETNYKEVSKIYDQMQRAGLQPDVVSYALLI 278
+A +L M +RG+ +T+ +NS++ E E K+++ M R G++P+V++Y LI
Sbjct: 459 RAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLI 518
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCS 338
N Y A + +EA+ + M+ G++P Y+ L++ + ++ A +FK M S
Sbjct: 519 NGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVS 578
Query: 339 PDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEI 398
PDI +Y +L A++ + R+ + G + TY ++ G K + +++
Sbjct: 579 PDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALQM 638
Query: 399 YDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPD 445
+ + + +K F ++DA K D A + S G P+
Sbjct: 639 FQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPN 685
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 102/398 (25%), Positives = 177/398 (44%), Gaps = 41/398 (10%)
Query: 59 PKDLVLGTLVRLKQLKKWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKV 118
P+ GTL++ K V L L +++ + F +LI AY KQG ++A V
Sbjct: 334 PEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYAKQGKVDQAMLV 393
Query: 119 LSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVE 178
S M ++G P+ V++ A++ + GR ++A F +M G P + Y ++
Sbjct: 394 FSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCT 453
Query: 179 ANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQS 238
NK++ AEE+ + +LD + + F+ +I + K G ++ KLF LM GV+ +
Sbjct: 454 CNKWERAEELILEMLDR---GICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPN 510
Query: 239 TVTYNSLM---SFETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFE 295
+TYN+L+ E K+ M GL+P+ V+Y+ LIN Y K R E+AL +F+
Sbjct: 511 VITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFK 570
Query: 296 EMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFK---------------------C--- 331
EM +GV P YNI+L + A+ ++ C
Sbjct: 571 EMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNK 630
Query: 332 -------MRRDRCSPDIC----SYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYG 380
M ++ C D+ ++ M+ A + + A+ F +G VPN TY
Sbjct: 631 LTDDALQMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYR 690
Query: 381 TLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIM 418
+ + LE++ +++ M NG + + I+
Sbjct: 691 LMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIV 728
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 68/278 (24%), Positives = 116/278 (41%), Gaps = 46/278 (16%)
Query: 221 EKARKLFALMAERGVQQSTVTYNSLMS---FETNYKEVSKIYDQMQRAG---LQPDVVSY 274
E AR +F + RG S N ++ ++ VS+ Y++M RAG + PD+ +Y
Sbjct: 32 EDARHVFDELLRRGRGASIYGLNRALADVARDSPAAAVSR-YNRMARAGADEVTPDLCTY 90
Query: 275 ALLINAYGKARREEEALA------------------------------------VFEEML 298
+LI +A R + A V M
Sbjct: 91 GILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMT 150
Query: 299 DAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDR---CSPDICSYTTMLSAYVNAS 355
+ G P +YNILL +A + M DR PD+ SYTT+++ +
Sbjct: 151 ELGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFKEG 210
Query: 356 DMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFT 415
D + A + + G +P+V+TY ++I K ++K ME+ + M NG+ P+ +
Sbjct: 211 DSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYN 270
Query: 416 TIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILL 453
+I+ Y + A+ + K+M S G PD ++L+
Sbjct: 271 SILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLM 308
>gi|15221515|ref|NP_176447.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75213223|sp|Q9SXD8.1|PPR90_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g62590
gi|5454201|gb|AAD43616.1|AC005698_15 T3P18.15 [Arabidopsis thaliana]
gi|332195860|gb|AEE33981.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 634
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 103/410 (25%), Positives = 203/410 (49%), Gaps = 18/410 (4%)
Query: 53 TRGQPLPKDLVLGTLVR-LKQLKKWNVVSEVLEWLR----IQSWWDFNEMDFLMLITAYG 107
+ +PLP + L+ + ++KK++VV + E ++ + + +N +LI +
Sbjct: 77 VKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYN-----ILINCFC 131
Query: 108 KQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSAL 167
++ + A +L M K GY PS+V+ ++L+ Y G R +A A+ +M G RP +
Sbjct: 132 RRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTI 191
Query: 168 TYQIILKLFVEANKFKEAEEVFMTLLDEE-KSPLKPDQKMFHMMIYMYKKAGGYEKARKL 226
T+ ++ NK EA + L+D + +P+ + +++ K G + A L
Sbjct: 192 TFTTLIHGLFLHNKASEA----VALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNL 247
Query: 227 FALMAERGVQQSTVTYNSLMSFETNYKEVS---KIYDQMQRAGLQPDVVSYALLINAYGK 283
M ++ V +N+++ Y+ V ++ +M+ G++P+VV+Y+ LI+
Sbjct: 248 LNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCS 307
Query: 284 ARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICS 343
R +A + +M++ + P +N L+DAF G +A ++ M + PDI +
Sbjct: 308 YGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFT 367
Query: 344 YTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMR 403
Y ++++ + ++ A++ F + P+V+TY TLIKG+ K +E E++ +M
Sbjct: 368 YNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMS 427
Query: 404 VNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILL 453
G+ + +TT++ + D D+A +K+M S G PPD +ILL
Sbjct: 428 HRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILL 477
Score = 148 bits (374), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 96/350 (27%), Positives = 169/350 (48%), Gaps = 6/350 (1%)
Query: 99 FLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQ 158
F +I + K + A + M KG P+VV++++L+ GR+ +A + M
Sbjct: 263 FNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMI 322
Query: 159 SSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAG 218
P+ +T+ ++ FV+ KF EAE+++ ++ K + PD ++ ++ +
Sbjct: 323 EKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMI---KRSIDPDIFTYNSLVNGFCMHD 379
Query: 219 GYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEV---SKIYDQMQRAGLQPDVVSYA 275
+KA+++F M + VTYN+L+ K V ++++ +M GL D V+Y
Sbjct: 380 RLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYT 439
Query: 276 LLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRD 335
LI + A VF++M+ GV P Y+ILLD +G +++A VF M++
Sbjct: 440 TLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKS 499
Query: 336 RCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKM 395
DI YTTM+ A ++ F L G PNV+TY T+I G L++
Sbjct: 500 EIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEA 559
Query: 396 MEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPD 445
+ KM+ +G PN + T++ A+ ++ D ++ +EM SC F D
Sbjct: 560 YALLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGD 609
Score = 101 bits (252), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 73/325 (22%), Positives = 142/325 (43%), Gaps = 8/325 (2%)
Query: 149 NAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDE-EKSPLKPDQKMF 207
+A +F M S P PS + + +L + KF +V ++L ++ ++ + +
Sbjct: 68 DAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKF----DVVISLGEKMQRLEIVHGLYTY 123
Query: 208 HMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVS---KIYDQMQR 264
+++I + + A L M + G + S VT +SL++ + K +S + DQM
Sbjct: 124 NILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVE 183
Query: 265 AGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQ 324
G +PD +++ LI+ + EA+A+ + M+ G +P Y ++++ G D
Sbjct: 184 MGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDL 243
Query: 325 ARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIK 384
A + M + D+ + T++ + ++ A F+ ++ G PNV+TY +LI
Sbjct: 244 ALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLIS 303
Query: 385 GYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPP 444
++ M I PN F ++DA+ K F A Y +M P
Sbjct: 304 CLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDP 363
Query: 445 DQKAKNILLSLAKTADERNEANELL 469
D N L++ D ++A ++
Sbjct: 364 DIFTYNSLVNGFCMHDRLDKAKQMF 388
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 67/270 (24%), Positives = 125/270 (46%), Gaps = 3/270 (1%)
Query: 223 ARKLFALMAERGVQQSTVTYNSLMSFETNYKE---VSKIYDQMQRAGLQPDVVSYALLIN 279
A LF M + S V +N L+S K+ V + ++MQR + + +Y +LIN
Sbjct: 69 AIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNILIN 128
Query: 280 AYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSP 339
+ + + ALA+ +M+ G P+ + LL+ + + A + M P
Sbjct: 129 CFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRP 188
Query: 340 DICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIY 399
D ++TT++ + A R+ Q G PN++TYG ++ G K + + + +
Sbjct: 189 DTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLL 248
Query: 400 DKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTA 459
+KM I+ + IF TI+D+ K + D A+ +KEME+ G P+ + L+S +
Sbjct: 249 NKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSY 308
Query: 460 DERNEANELLGNFNHPNNEPGINGLSISVD 489
++A++LL + P + + +D
Sbjct: 309 GRWSDASQLLSDMIEKKINPNLVTFNALID 338
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 38/182 (20%), Positives = 80/182 (43%), Gaps = 1/182 (0%)
Query: 288 EEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTM 347
++A+ +F M+ + P+ +N LL A A D ++ + M+R + +Y +
Sbjct: 67 DDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNIL 126
Query: 348 LSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGI 407
++ + S + A ++ + G+ P+++T +L+ GY + + + D+M G
Sbjct: 127 INCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGY 186
Query: 408 KPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLS-LAKTADERNEAN 466
+P+ FTT++ + AV M G P+ ++++ L K D N
Sbjct: 187 RPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALN 246
Query: 467 EL 468
L
Sbjct: 247 LL 248
Score = 47.8 bits (112), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 33/168 (19%), Positives = 68/168 (40%)
Query: 322 VDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGT 381
+D A +F M + R P I + +LSA + ++++ V + TY
Sbjct: 66 LDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNI 125
Query: 382 LIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCG 441
LI + + + + + + KM G +P+ +++++ Y K AV +M G
Sbjct: 126 LINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMG 185
Query: 442 FPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGINGLSISVD 489
+ PD L+ ++ +EA L+ +P + + V+
Sbjct: 186 YRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVN 233
>gi|242060656|ref|XP_002451617.1| hypothetical protein SORBIDRAFT_04g004710 [Sorghum bicolor]
gi|241931448|gb|EES04593.1| hypothetical protein SORBIDRAFT_04g004710 [Sorghum bicolor]
Length = 593
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 114/444 (25%), Positives = 207/444 (46%), Gaps = 44/444 (9%)
Query: 61 DLVLGTLVRLKQLKKWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLS 120
D ++ V+L+ ++W + V EW+ +S + + + + +LI AYG++ NKAE +
Sbjct: 130 DDIVNVAVQLRLNRQWEPIITVCEWILYRSSFRPDIICYNLLIDAYGQKRQLNKAESIYM 189
Query: 121 FMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEAN 180
+ + P+ ++ L+ AY G+ AE + MQ +G P+A Y L ++A
Sbjct: 190 ALLEAHCVPTEDTYALLLRAYCNSGQLHRAEGVISEMQKNGLPPTATVYNAYLDGLLKAR 249
Query: 181 KFKEAEEVFMTLLDEE------------------KSPL--------------KPDQKMFH 208
++A EV+ + E K P+ KP+ +
Sbjct: 250 CSEKAVEVYQRMKKERCRTNTETYTLMINVYGKAKQPMSSLKVFNEMKTIGCKPNICTYT 309
Query: 209 MMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNY---KEVSKIYDQMQRA 265
++ + + G EKA ++F M + G + YN+LM + + S+I+ M+
Sbjct: 310 ALVNAFAREGLCEKAEEVFEEMQQAGHEPDVYAYNALMEAYSRAGLPQGASEIFSLMEHM 369
Query: 266 GLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQA 325
G +PD SY +L++AYG+A +EA A F+E+ G+RPT K++ +LL A A SG V +
Sbjct: 370 GCEPDRASYNILVDAYGRAGLHQEAEAAFQELKQQGMRPTMKSHMLLLSAHAKSGNVARC 429
Query: 326 RTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFV-------PNVIT 378
V + + PD + ML+AY A ++ E+ +++ G P+ T
Sbjct: 430 EEVMAQLHKSGLRPDTFALNAMLNAYGRAGRLDDMERLLGAMERGGDDDAGGGAAPDTST 489
Query: 379 YGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEME 438
Y L+ Y + L++M + + G+ + +T+ + AY + K++ + ++EM
Sbjct: 490 YNVLVNVYGRAGYLDRMEAAFRALAARGLAADVVTWTSRIGAYARKKEYGRCLEIFEEMV 549
Query: 439 SCGFPPDQKAKNILLSLAKTADER 462
G PD +L LA +DER
Sbjct: 550 DAGCYPDAGTAKVL--LAACSDER 571
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 75/315 (23%), Positives = 154/315 (48%), Gaps = 8/315 (2%)
Query: 160 SGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGG 219
S RP + Y +++ + + + +AE ++M LL+ + P + + +++ Y +G
Sbjct: 159 SSFRPDIICYNLLIDAYGQKRQLNKAESIYMALLE---AHCVPTEDTYALLLRAYCNSGQ 215
Query: 220 YEKARKLFALMAERGVQQSTVTYNS----LMSFETNYKEVSKIYDQMQRAGLQPDVVSYA 275
+A + + M + G+ + YN+ L+ + K V ++Y +M++ + + +Y
Sbjct: 216 LHRAEGVISEMQKNGLPPTATVYNAYLDGLLKARCSEKAV-EVYQRMKKERCRTNTETYT 274
Query: 276 LLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRD 335
L+IN YGKA++ +L VF EM G +P Y L++AFA G+ ++A VF+ M++
Sbjct: 275 LMINVYGKAKQPMSSLKVFNEMKTIGCKPNICTYTALVNAFAREGLCEKAEEVFEEMQQA 334
Query: 336 RCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKM 395
PD+ +Y ++ AY A +GA + F ++ G P+ +Y L+ Y + ++
Sbjct: 335 GHEPDVYAYNALMEAYSRAGLPQGASEIFSLMEHMGCEPDRASYNILVDAYGRAGLHQEA 394
Query: 396 MEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSL 455
+ +++ G++P ++ A+ K+ + ++ G PD A N +L+
Sbjct: 395 EAAFQELKQQGMRPTMKSHMLLLSAHAKSGNVARCEEVMAQLHKSGLRPDTFALNAMLNA 454
Query: 456 AKTADERNEANELLG 470
A ++ LLG
Sbjct: 455 YGRAGRLDDMERLLG 469
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 64/228 (28%), Positives = 114/228 (50%)
Query: 262 MQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGM 321
+ R+ +PD++ Y LLI+AYG+ R+ +A +++ +L+A PT Y +LL A+ SG
Sbjct: 156 LYRSSFRPDIICYNLLIDAYGQKRQLNKAESIYMALLEAHCVPTEDTYALLLRAYCNSGQ 215
Query: 322 VDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGT 381
+ +A V M+++ P Y L + A E A + ++R+K++ N TY
Sbjct: 216 LHRAEGVISEMQKNGLPPTATVYNAYLDGLLKARCSEKAVEVYQRMKKERCRTNTETYTL 275
Query: 382 LIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCG 441
+I Y K ++++++M+ G KPN +T +++A+ + + A ++EM+ G
Sbjct: 276 MINVYGKAKQPMSSLKVFNEMKTIGCKPNICTYTALVNAFAREGLCEKAEEVFEEMQQAG 335
Query: 442 FPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGINGLSISVD 489
PD A N L+ A A+E+ H EP +I VD
Sbjct: 336 HEPDVYAYNALMEAYSRAGLPQGASEIFSLMEHMGCEPDRASYNILVD 383
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 76/332 (22%), Positives = 142/332 (42%), Gaps = 54/332 (16%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + L+ A+ ++G KAE+V M + G+ P V ++ ALMEAY R G + A IF
Sbjct: 304 NICTYTALVNAFAREGLCEKAEEVFEEMQQAGHEPDVYAYNALMEAYSRAGLPQGASEIF 363
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
M+ G P +Y I++ + A +EAE F L ++ ++P K +++ +
Sbjct: 364 SLMEHMGCEPDRASYNILVDAYGRAGLHQEAEAAFQEL---KQQGMRPTMKSHMLLLSAH 420
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSKIYDQMQRAGLQPDVVSY 274
K+G + ++ A Q+ ++GL+PD +
Sbjct: 421 AKSGNVARCEEVMA--------------------------------QLHKSGLRPDTFAL 448
Query: 275 ALLINAYGKARREEEALAVFEEMLDAGVR-----------PTHKAYNILLDAFAISGMVD 323
++NAYG+A R ++ E +L A R P YN+L++ + +G +D
Sbjct: 449 NAMLNAYGRAGRLDD----MERLLGAMERGGDDDAGGGAAPDTSTYNVLVNVYGRAGYLD 504
Query: 324 QARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLI 383
+ F+ + + D+ ++T+ + AY + + F + G P+ T L+
Sbjct: 505 RMEAAFRALAARGLAADVVTWTSRIGAYARKKEYGRCLEIFEEMVDAGCYPDAGTAKVLL 564
Query: 384 KGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFT 415
+ +E++ I M K +T+F
Sbjct: 565 AACSDERQVEQVTAIVRSMH----KDAKTLFA 592
>gi|15239874|ref|NP_196771.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171712|sp|Q9FMQ1.1|PP376_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g12100, mitochondrial; Flags: Precursor
gi|9759377|dbj|BAB10028.1| unnamed protein product [Arabidopsis thaliana]
gi|28973713|gb|AAO64173.1| unknown protein [Arabidopsis thaliana]
gi|29824237|gb|AAP04079.1| unknown protein [Arabidopsis thaliana]
gi|110737169|dbj|BAF00534.1| hypothetical protein [Arabidopsis thaliana]
gi|332004380|gb|AED91763.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 816
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 107/375 (28%), Positives = 185/375 (49%), Gaps = 10/375 (2%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
LI + + G+ AEK ++ M KG +PSV ++ L+ YGR + I + M+ +G
Sbjct: 430 LIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNG 489
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
P+ ++Y ++ + +K EA+ V D E + P ++++M+I G E
Sbjct: 490 TMPNVVSYGTLINCLCKGSKLLEAQIVKR---DMEDRGVSPKVRIYNMLIDGCCSKGKIE 546
Query: 222 KARKLFALMAERGVQQSTVTYNSL---MSFETNYKEVSKIYDQMQRAGLQPDVVSYALLI 278
A + M ++G++ + VTYN+L +S E + ++ R GL+PDV +Y LI
Sbjct: 547 DAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLI 606
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCS 338
+ YG A + +A++EEM +G++PT K Y++L+ G ++ +F M
Sbjct: 607 SGYGFAGNVQRCIALYEEMKRSGIKPTLKTYHLLISLCTKEG-IELTERLFGEMS---LK 662
Query: 339 PDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEI 398
PD+ Y +L Y DME A +++ + + TY +LI G KV L ++ +
Sbjct: 663 PDLLVYNGVLHCYAVHGDMEKAFNLQKQMIEKSIGLDKTTYNSLILGQLKVGKLCEVRSL 722
Query: 399 YDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKT 458
D+M ++P + I+ + + KD+ SA VWY+EM+ GF D N L+S K
Sbjct: 723 IDEMNAREMEPEADTYNIIVKGHCEVKDYMSAYVWYREMQEKGFLLDVCIGNELVSGLKE 782
Query: 459 ADERNEANELLGNFN 473
EA ++ N
Sbjct: 783 EWRSKEAEIVISEMN 797
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 92/367 (25%), Positives = 168/367 (45%), Gaps = 14/367 (3%)
Query: 97 MDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRR 156
+ F L+ K G AE VL M G+ P + + L + Y + + A ++
Sbjct: 285 ITFNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYET 344
Query: 157 MQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKK 216
SG + +A T I+L + K ++AEE+ L E L P++ +++ MI Y +
Sbjct: 345 AVDSGVKMNAYTCSILLNALCKEGKIEKAEEI---LGREMAKGLVPNEVIYNTMIDGYCR 401
Query: 217 AGGYEKARKLFALMAERGVQQSTVTYNSLM-------SFETNYKEVSKIYDQMQRAGLQP 269
G AR M ++G++ + YN L+ E KEV+K M+ G+ P
Sbjct: 402 KGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNK----MKLKGVSP 457
Query: 270 DVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVF 329
V +Y +LI YG+ ++ + +EM D G P +Y L++ + +A+ V
Sbjct: 458 SVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVK 517
Query: 330 KCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKV 389
+ M SP + Y ++ + +E A +F + + + G N++TY TLI G +
Sbjct: 518 RDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMT 577
Query: 390 NNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAK 449
L + ++ ++ G+KP+ + +++ YG + + Y+EM+ G P K
Sbjct: 578 GKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSGIKPTLKTY 637
Query: 450 NILLSLA 456
++L+SL
Sbjct: 638 HLLISLC 644
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 105/430 (24%), Positives = 184/430 (42%), Gaps = 54/430 (12%)
Query: 34 LMNQIEEVGSAVAVLRSERTRGQPLPKD---LVLGTLVRLKQLK-KWNVVSEVLEWLRIQ 89
L+N+ + + A + + R G D L+L LV+ KQ + NV +LE
Sbjct: 118 LLNESKMISEAADLFFALRNEGIYPSSDSLTLLLDHLVKTKQFRVTINVFLNILES---- 173
Query: 90 SWWDFNEMDFLM--LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRY 147
DF F+ I A K D K ++ + M PSV + L++ +G R
Sbjct: 174 ---DFRPSKFMYGKAIQAAVKLSDVGKGLELFNRMKHDRIYPSVFIYNVLIDGLCKGKRM 230
Query: 148 KNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMF 207
+AE +F M + PS +TY TL+D
Sbjct: 231 NDAEQLFDEMLARRLLPSLITYN--------------------TLIDG------------ 258
Query: 208 HMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMS--FETNYKE-VSKIYDQMQR 264
Y KAG EK+ K+ M ++ S +T+N+L+ F+ E + +M+
Sbjct: 259 ------YCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKD 312
Query: 265 AGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQ 324
G PD ++++L + Y + E AL V+E +D+GV+ +ILL+A G +++
Sbjct: 313 LGFVPDAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEK 372
Query: 325 ARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIK 384
A + P+ Y TM+ Y D+ GA +++ G P+ + Y LI+
Sbjct: 373 AEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIR 432
Query: 385 GYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPP 444
+ ++ +E + +KM++ G+ P+ + ++ YG+ +FD KEME G P
Sbjct: 433 RFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMP 492
Query: 445 DQKAKNILLS 454
+ + L++
Sbjct: 493 NVVSYGTLIN 502
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 89/384 (23%), Positives = 166/384 (43%), Gaps = 6/384 (1%)
Query: 101 MLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSS 160
+LI K N AE++ M + PS++++ L++ Y + G + + + RM++
Sbjct: 219 VLIDGLCKGKRMNDAEQLFDEMLARRLLPSLITYNTLIDGYCKAGNPEKSFKVRERMKAD 278
Query: 161 GPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGY 220
PS +T+ +LK +A ++AE V + D PD F ++ Y
Sbjct: 279 HIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKD---LGFVPDAFTFSILFDGYSSNEKA 335
Query: 221 EKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSKIYDQMQR---AGLQPDVVSYALL 277
E A ++ + GV+ + T + L++ ++ K + + R GL P+ V Y +
Sbjct: 336 EAALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTM 395
Query: 278 INAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRC 337
I+ Y + A E M G++P H AYN L+ F G ++ A M+
Sbjct: 396 IDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGV 455
Query: 338 SPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMME 397
SP + +Y ++ Y + + + ++ +G +PNV++YGTLI K + L +
Sbjct: 456 SPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQI 515
Query: 398 IYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAK 457
+ M G+ P I+ ++D + A + KEM G + N L+
Sbjct: 516 VKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLS 575
Query: 458 TADERNEANELLGNFNHPNNEPGI 481
+ +EA +LL + +P +
Sbjct: 576 MTGKLSEAEDLLLEISRKGLKPDV 599
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 68/317 (21%), Positives = 135/317 (42%), Gaps = 19/317 (5%)
Query: 173 LKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFH----------------MMIYMYKK 216
L++ ++ N+ + A V +LL + +P +++F ++ + +
Sbjct: 62 LRVLLQQNRIETARGVLSSLLRSDSTPFASPKELFSAFSLSSPSLKHDFSYLLLSVLLNE 121
Query: 217 AGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVS---KIYDQMQRAGLQPDVVS 273
+ +A LF + G+ S+ + L+ K+ ++ + + +P
Sbjct: 122 SKMISEAADLFFALRNEGIYPSSDSLTLLLDHLVKTKQFRVTINVFLNILESDFRPSKFM 181
Query: 274 YALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMR 333
Y I A K + L +F M + P+ YN+L+D ++ A +F M
Sbjct: 182 YGKAIQAAVKLSDVGKGLELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEML 241
Query: 334 RDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLE 393
R P + +Y T++ Y A + E + K R+K D P++IT+ TL+KG K +E
Sbjct: 242 ARRLLPSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVE 301
Query: 394 KMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILL 453
+ +M+ G P+ F+ + D Y N+ ++A+ Y+ G + +ILL
Sbjct: 302 DAENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILL 361
Query: 454 SLAKTADERNEANELLG 470
+ + +A E+LG
Sbjct: 362 NALCKEGKIEKAEEILG 378
>gi|168047804|ref|XP_001776359.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162672319|gb|EDQ58858.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 499
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 96/358 (26%), Positives = 174/358 (48%), Gaps = 6/358 (1%)
Query: 99 FLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQ 158
F+ L Y G K+ + L M A + ++ +L++A+ + G + A A++R M
Sbjct: 57 FIELARGYASAGLLEKSVEALKRMEGHRCALTASAYNSLIDAFVKAGYTQKALAVYRVMG 116
Query: 159 SSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAG 218
SG RP T+ +++ F +A + ++F + ++ SP + + ++I K G
Sbjct: 117 QSGLRPDTYTFNVLMNAFKKAKRVDSVWKLFEEMQNQNCSP---NVITYSILIDAVCKCG 173
Query: 219 GYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSK---IYDQMQRAGLQPDVVSYA 275
G EKA K+F M RG + + TY S++ V K ++++M GL V Y
Sbjct: 174 GVEKALKVFLDMKSRGCRPNIFTYTSMIDGLGKSGHVDKAFFLFEEMTSEGLVATRVVYN 233
Query: 276 LLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRD 335
LI+ G++ R + A +F EML G++P H + L+ ++G +AR +F+ R
Sbjct: 234 SLIHGLGRSGRADAAAKLFREMLSKGLQPDHVTFTSLVYGLGVAGRASEARRIFQEARDV 293
Query: 336 RCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKM 395
C+ D+ Y ++ + ++ A + F L++DG VP+V T+ L+ G K +
Sbjct: 294 GCALDVNLYNVLIDTLCKSKRLDEAWEIFGELEEDGLVPDVYTFNALMDGLCKSGRIHDA 353
Query: 396 MEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILL 453
+ M+ G P+ T++ T++D K+ + A EM+S G+ PD N L+
Sbjct: 354 FILLGDMKRAGCTPDVTVYNTLIDGLRKSGRVEEAGQLLLEMQSLGYEPDVVTYNTLI 411
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 100/365 (27%), Positives = 168/365 (46%), Gaps = 8/365 (2%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
LI A+ K G KA V M + G P + LM A+ + R + +F MQ+
Sbjct: 95 LIDAFVKAGYTQKALAVYRVMGQSGLRPDTYTFNVLMNAFKKAKRVDSVWKLFEEMQNQN 154
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
P+ +TY I++ + ++A +VF LD + +P+ + MI K+G +
Sbjct: 155 CSPNVITYSILIDAVCKCGGVEKALKVF---LDMKSRGCRPNIFTYTSMIDGLGKSGHVD 211
Query: 222 KARKLFALMAERGVQQSTVTYNSL---MSFETNYKEVSKIYDQMQRAGLQPDVVSYALLI 278
KA LF M G+ + V YNSL + +K++ +M GLQPD V++ L+
Sbjct: 212 KAFFLFEEMTSEGLVATRVVYNSLIHGLGRSGRADAAAKLFREMLSKGLQPDHVTFTSLV 271
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCS 338
G A R EA +F+E D G YN+L+D S +D+A +F + D
Sbjct: 272 YGLGVAGRASEARRIFQEARDVGCALDVNLYNVLIDTLCKSKRLDEAWEIFGELEEDGLV 331
Query: 339 PDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEI 398
PD+ ++ ++ + + A +K+ G P+V Y TLI G K +E+ ++
Sbjct: 332 PDVYTFNALMDGLCKSGRIHDAFILLGDMKRAGCTPDVTVYNTLIDGLRKSGRVEEAGQL 391
Query: 399 YDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNIL--LSLA 456
+M+ G +P+ + T++D K + A+ ++E+ + GF IL L +A
Sbjct: 392 LLEMQSLGYEPDVVTYNTLIDESCKGGRIEDALRLFEEISAKGFANTVTYNTILNGLCMA 451
Query: 457 KTADE 461
DE
Sbjct: 452 GRVDE 456
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 73/285 (25%), Positives = 133/285 (46%), Gaps = 5/285 (1%)
Query: 200 LKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMS--FETNYKEVS- 256
L+P ++F + Y AG EK+ + M + YNSL+ + Y + +
Sbjct: 52 LQP--RIFIELARGYASAGLLEKSVEALKRMEGHRCALTASAYNSLIDAFVKAGYTQKAL 109
Query: 257 KIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAF 316
+Y M ++GL+PD ++ +L+NA+ KA+R + +FEEM + P Y+IL+DA
Sbjct: 110 AVYRVMGQSGLRPDTYTFNVLMNAFKKAKRVDSVWKLFEEMQNQNCSPNVITYSILIDAV 169
Query: 317 AISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNV 376
G V++A VF M+ C P+I +YT+M+ + ++ A F + +G V
Sbjct: 170 CKCGGVEKALKVFLDMKSRGCRPNIFTYTSMIDGLGKSGHVDKAFFLFEEMTSEGLVATR 229
Query: 377 ITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKE 436
+ Y +LI G + + +++ +M G++P+ FT+++ G A ++E
Sbjct: 230 VVYNSLIHGLGRSGRADAAAKLFREMLSKGLQPDHVTFTSLVYGLGVAGRASEARRIFQE 289
Query: 437 MESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGI 481
G D N+L+ + +EA E+ G P +
Sbjct: 290 ARDVGCALDVNLYNVLIDTLCKSKRLDEAWEIFGELEEDGLVPDV 334
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 84/301 (27%), Positives = 140/301 (46%), Gaps = 17/301 (5%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + +I GK G +KA + M +G + V + +L+ GR GR A +F
Sbjct: 193 NIFTYTSMIDGLGKSGHVDKAFFLFEEMTSEGLVATRVVYNSLIHGLGRSGRADAAAKLF 252
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
R M S G +P +T+ ++ A + EA +F D D +++++I
Sbjct: 253 REMLSKGLQPDHVTFTSLVYGLGVAGRASEARRIFQEARD---VGCALDVNLYNVLIDTL 309
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSKIYDQ------MQRAGLQ 268
K+ ++A ++F + E G+ T+N+LM + +I+D M+RAG
Sbjct: 310 CKSKRLDEAWEIFGELEEDGLVPDVYTFNALMD---GLCKSGRIHDAFILLGDMKRAGCT 366
Query: 269 PDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTV 328
PDV Y LI+ K+ R EEA + EM G P YN L+D G ++ A +
Sbjct: 367 PDVTVYNTLIDGLRKSGRVEEAGQLLLEMQSLGYEPDVVTYNTLIDESCKGGRIEDALRL 426
Query: 329 FKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQ---DGFV-PNVITYGTLIK 384
F+ + + + +Y T+L+ A ++ A K F +KQ DG + P+ +TY TL+
Sbjct: 427 FEEISAKGFANTV-TYNTILNGLCMAGRVDEAYKLFNGMKQETVDGVIDPDFVTYTTLLN 485
Query: 385 G 385
G
Sbjct: 486 G 486
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 63/267 (23%), Positives = 107/267 (40%), Gaps = 62/267 (23%)
Query: 32 RRLMNQIEEVGSAVAVLRSERTRGQPLPKDLVLGTLVRLKQL-KKWNVVSEVLEWLRIQS 90
RR+ + +VG A+ V ++++ TL + K+L + W + E+ E +
Sbjct: 284 RRIFQEARDVGCALDVN----------LYNVLIDTLCKSKRLDEAWEIFGELEEDGLVPD 333
Query: 91 WWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNA 150
+ FN L+ K G + A +L M + G P V + L++ + GR + A
Sbjct: 334 VYTFNA-----LMDGLCKSGRIHDAFILLGDMKRAGCTPDVTVYNTLIDGLRKSGRVEEA 388
Query: 151 EAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMM 210
+ MQS G P +TY TL+DE
Sbjct: 389 GQLLLEMQSLGYEPDVVTYN--------------------TLIDES-------------- 414
Query: 211 IYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSL---MSFETNYKEVSKIYDQMQR--- 264
K G E A +LF ++ +G +TVTYN++ + E K+++ M++
Sbjct: 415 ----CKGGRIEDALRLFEEISAKGF-ANTVTYNTILNGLCMAGRVDEAYKLFNGMKQETV 469
Query: 265 -AGLQPDVVSYALLINAYGKARREEEA 290
+ PD V+Y L+N +A E A
Sbjct: 470 DGVIDPDFVTYTTLLNGARQAGLSELA 496
>gi|15224262|ref|NP_179484.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75099137|sp|O64624.1|PP163_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g18940
gi|3004555|gb|AAC09028.1| putative salt-inducible protein [Arabidopsis thaliana]
gi|15983785|gb|AAL10489.1| At2g18940/F19F24.14 [Arabidopsis thaliana]
gi|38564280|gb|AAR23719.1| At2g18940/F19F24.14 [Arabidopsis thaliana]
gi|330251736|gb|AEC06830.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 822
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 122/428 (28%), Positives = 202/428 (47%), Gaps = 24/428 (5%)
Query: 53 TRGQPLPKDLVLGTLVR-LKQLKKWNVVSEVLEWLRIQSWWDFNEMDFLML---ITAYGK 108
+ + L DLV +LV+ L W + EWL + S ++D ++ + G+
Sbjct: 130 VKSELLRTDLV--SLVKGLDDSGHWERAVFLFEWLVLSSNSGALKLDHQVIEIFVRILGR 187
Query: 109 QGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALT 168
+ ++ A K+L + + Y V ++T ++ AY R G+Y+ A +F RM+ GP P+ +T
Sbjct: 188 ESQYSVAAKLLDKIPLQEYLLDVRAYTTILHAYSRTGKYEKAIDLFERMKEMGPSPTLVT 247
Query: 169 YQIILKLFVEANKFKEAEEVFMTLLDEEKSP-LKPDQKMFHMMIYMYKKAGGYEKARKLF 227
Y +IL +F K + + +LDE +S LK D+ ++ + G +A++ F
Sbjct: 248 YNVILDVF---GKMGRSWRKILGVLDEMRSKGLKFDEFTCSTVLSACAREGLLREAKEFF 304
Query: 228 ALMAERGVQQSTVTYNSLMSF---ETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKA 284
A + G + TVTYN+L+ Y E + +M+ D V+Y L+ AY +A
Sbjct: 305 AELKSCGYEPGTVTYNALLQVFGKAGVYTEALSVLKEMEENSCPADSVTYNELVAAYVRA 364
Query: 285 RREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSY 344
+EA V E M GV P Y ++DA+ +G D+A +F M+ C P+ C+Y
Sbjct: 365 GFSKEAAGVIEMMTKKGVMPNAITYTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTY 424
Query: 345 TTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLI-----KGYAKVNNLEKMMEIY 399
+LS S K +K +G PN T+ T++ KG K N ++
Sbjct: 425 NAVLSLLGKKSRSNEMIKMLCDMKSNGCSPNRATWNTMLALCGNKGMDKFVN-----RVF 479
Query: 400 DKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILL-SLAKT 458
+M+ G +P++ F T++ AYG+ A Y EM GF N LL +LA+
Sbjct: 480 REMKSCGFEPDRDTFNTLISAYGRCGSEVDASKMYGEMTRAGFNACVTTYNALLNALARK 539
Query: 459 ADERNEAN 466
D R+ N
Sbjct: 540 GDWRSGEN 547
Score = 142 bits (359), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 108/447 (24%), Positives = 194/447 (43%), Gaps = 42/447 (9%)
Query: 71 KQLKKWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPS 130
K + W + VL+ +R + F+E +++A ++G +A++ + + GY P
Sbjct: 257 KMGRSWRKILGVLDEMRSKGL-KFDEFTCSTVLSACAREGLLREAKEFFAELKSCGYEPG 315
Query: 131 VVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFM 190
V++ AL++ +G+ G Y A ++ + M+ + ++TY ++ +V A KEA V
Sbjct: 316 TVTYNALLQVFGKAGVYTEALSVLKEMEENSCPADSVTYNELVAAYVRAGFSKEAAGVIE 375
Query: 191 TLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSF-- 248
+ K + P+ + +I Y KAG ++A KLF M E G +T TYN+++S
Sbjct: 376 MM---TKKGVMPNAITYTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSLLG 432
Query: 249 ---------------ETNY---------------------KEVSKIYDQMQRAGLQPDVV 272
++N K V++++ +M+ G +PD
Sbjct: 433 KKSRSNEMIKMLCDMKSNGCSPNRATWNTMLALCGNKGMDKFVNRVFREMKSCGFEPDRD 492
Query: 273 SYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCM 332
++ LI+AYG+ E +A ++ EM AG YN LL+A A G V M
Sbjct: 493 TFNTLISAYGRCGSEVDASKMYGEMTRAGFNACVTTYNALLNALARKGDWRSGENVISDM 552
Query: 333 RRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNL 392
+ P SY+ ML Y + G E+ R+K+ P+ + TL+ K L
Sbjct: 553 KSKGFKPTETSYSLMLQCYAKGGNYLGIERIENRIKEGQIFPSWMLLRTLLLANFKCRAL 612
Query: 393 EKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNIL 452
+ + +G KP+ IF +++ + +N +D A + + G PD N L
Sbjct: 613 AGSERAFTLFKKHGYKPDMVIFNSMLSIFTRNNMYDQAEGILESIREDGLSPDLVTYNSL 672
Query: 453 LSLAKTADERNEANELLGNFNHPNNEP 479
+ + E +A E+L +P
Sbjct: 673 MDMYVRRGECWKAEEILKTLEKSQLKP 699
Score = 115 bits (289), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 76/361 (21%), Positives = 156/361 (43%), Gaps = 46/361 (12%)
Query: 99 FLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQ 158
F LI+AYG+ G A K+ M + G+ V ++ AL+ A R G +++ E + M+
Sbjct: 494 FNTLISAYGRCGSEVDASKMYGEMTRAGFNACVTTYNALLNALARKGDWRSGENVISDMK 553
Query: 159 SSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAG 218
S G +P+ +Y ++L+ + + + E + + ++ + P + ++ K
Sbjct: 554 SKGFKPTETSYSLMLQCYAKGGNYLGIERIENRI---KEGQIFPSWMLLRTLLLANFKCR 610
Query: 219 GYEKARKLFALMAERGVQQSTVTYNSLMSFETN---YKEVSKIYDQMQRAGLQPDVVSYA 275
+ + F L + G + V +NS++S T Y + I + ++ GL PD+V+
Sbjct: 611 ALAGSERAFTLFKKHGYKPDMVIFNSMLSIFTRNNMYDQAEGILESIREDGLSPDLVT-- 668
Query: 276 LLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRD 335
YN L+D + G +A + K + +
Sbjct: 669 ---------------------------------YNSLMDMYVRRGECWKAEEILKTLEKS 695
Query: 336 RCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKM 395
+ PD+ SY T++ + M+ A + + + G P + TY T + GY + ++
Sbjct: 696 QLKPDLVSYNTVIKGFCRRGLMQEAVRMLSEMTERGIRPCIFTYNTFVSGYTAMGMFAEI 755
Query: 396 MEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPP---DQKAKNIL 452
++ + M N +PN+ F ++D Y + + A+ + ++++ F P DQ + +
Sbjct: 756 EDVIECMAKNDCRPNELTFKMVVDGYCRAGKYSEAMDFVSKIKT--FDPCFDDQSIQRLA 813
Query: 453 L 453
L
Sbjct: 814 L 814
>gi|115472657|ref|NP_001059927.1| Os07g0548300 [Oryza sativa Japonica Group]
gi|28564790|dbj|BAC57720.1| putative crp1 protein [Oryza sativa Japonica Group]
gi|113611463|dbj|BAF21841.1| Os07g0548300 [Oryza sativa Japonica Group]
Length = 661
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 94/356 (26%), Positives = 180/356 (50%), Gaps = 6/356 (1%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
L+ Y K G AE+VL M++ G AP +++ L++AY R GR+++A + + M++ G
Sbjct: 298 LLKGYVKIGSLKNAEQVLDEMSQCGVAPDEATYSLLVDAYTRAGRWESARILLKEMEADG 357
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
+PS+ + IL F + ++++A F L + S ++PD+ +++MI + K
Sbjct: 358 VKPSSYVFSRILAGFRDRGEWQKA---FAVLREMHASGVRPDRHFYNVMIDTFGKYNCLG 414
Query: 222 KARKLFALMAERGVQQSTVTYNSLMSFET---NYKEVSKIYDQMQRAGLQPDVVSYALLI 278
A F M E G++ VT+N+L+ + +++D+M+ + +Y ++I
Sbjct: 415 HAMDAFDRMREEGIEPDVVTWNTLIDAHCKGGRHDRAIELFDEMRESNCPLGTTTYNIMI 474
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCS 338
N G+ +R E A+ EM + G+ P Y L+D + SG +A + M+ D
Sbjct: 475 NLLGEEQRWEGVEAMLAEMKEQGLVPNIITYTTLVDVYGRSGRFKEAVDCIEAMKADGLK 534
Query: 339 PDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEI 398
P Y +++AY + A + ++ DG + + +LI + + + + +
Sbjct: 535 PSPTMYHALVNAYAQRGLADHALNVVKAMRADGLEASTVVLNSLINAFGEDRRIAEAFSV 594
Query: 399 YDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLS 454
M+ NG++P+ +TT+M A + + F+ V Y+EM + G PD+KA+ +L S
Sbjct: 595 LQFMKENGLRPDVITYTTLMKALIRVEQFEKVPVIYEEMITSGCAPDRKARAMLRS 650
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 96/357 (26%), Positives = 175/357 (49%), Gaps = 9/357 (2%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
LI+A+ + + A ++L+ G P + TAL+ + G R AEA+F +G
Sbjct: 227 LISAFARARLPDAALELLASAQAIGLTPRSNAVTALISSLGSARRVAEAEALFLEFFLAG 286
Query: 162 P-RPSALTYQIILKLFVEANKFKEAEEVFMTLLDE-EKSPLKPDQKMFHMMIYMYKKAGG 219
+P Y +LK +V+ K AE+V LDE + + PD+ + +++ Y +AG
Sbjct: 287 EIKPRTRAYNALLKGYVKIGSLKNAEQV----LDEMSQCGVAPDEATYSLLVDAYTRAGR 342
Query: 220 YEKARKLFALMAERGVQQSTVTYNSLMSF---ETNYKEVSKIYDQMQRAGLQPDVVSYAL 276
+E AR L M GV+ S+ ++ +++ +++ + +M +G++PD Y +
Sbjct: 343 WESARILLKEMEADGVKPSSYVFSRILAGFRDRGEWQKAFAVLREMHASGVRPDRHFYNV 402
Query: 277 LINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDR 336
+I+ +GK A+ F+ M + G+ P +N L+DA G D+A +F MR
Sbjct: 403 MIDTFGKYNCLGHAMDAFDRMREEGIEPDVVTWNTLIDAHCKGGRHDRAIELFDEMRESN 462
Query: 337 CSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMM 396
C +Y M++ EG E +K+ G VPN+ITY TL+ Y + ++ +
Sbjct: 463 CPLGTTTYNIMINLLGEEQRWEGVEAMLAEMKEQGLVPNIITYTTLVDVYGRSGRFKEAV 522
Query: 397 EIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILL 453
+ + M+ +G+KP+ T++ +++AY + D A+ K M + G N L+
Sbjct: 523 DCIEAMKADGLKPSPTMYHALVNAYAQRGLADHALNVVKAMRADGLEASTVVLNSLI 579
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 74/296 (25%), Positives = 137/296 (46%), Gaps = 4/296 (1%)
Query: 164 PSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKA 223
P +Y +L + +A + L D +S L+PD +F +I + +A + A
Sbjct: 181 PDLASYSHLLASLLNTRDPPDAALLDRLLGDLRESRLEPDAPLFSDLISAFARARLPDAA 240
Query: 224 RKLFALMAERGVQQSTVTYNSLMSFETNYKEVSK---IYDQMQRAG-LQPDVVSYALLIN 279
+L A G+ + +L+S + + V++ ++ + AG ++P +Y L+
Sbjct: 241 LELLASAQAIGLTPRSNAVTALISSLGSARRVAEAEALFLEFFLAGEIKPRTRAYNALLK 300
Query: 280 AYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSP 339
Y K + A V +EM GV P Y++L+DA+ +G + AR + K M D P
Sbjct: 301 GYVKIGSLKNAEQVLDEMSQCGVAPDEATYSLLVDAYTRAGRWESARILLKEMEADGVKP 360
Query: 340 DICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIY 399
++ +L+ + + + + A R + G P+ Y +I + K N L M+ +
Sbjct: 361 SSYVFSRILAGFRDRGEWQKAFAVLREMHASGVRPDRHFYNVMIDTFGKYNCLGHAMDAF 420
Query: 400 DKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSL 455
D+MR GI+P+ + T++DA+ K D A+ + EM P NI+++L
Sbjct: 421 DRMREEGIEPDVVTWNTLIDAHCKGGRHDRAIELFDEMRESNCPLGTTTYNIMINL 476
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 108/218 (49%), Gaps = 6/218 (2%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
LI A+ K G ++A ++ M + ++ ++ G R++ EA+ M+ G
Sbjct: 438 LIDAHCKGGRHDRAIELFDEMRESNCPLGTTTYNIMINLLGEEQRWEGVEAMLAEMKEQG 497
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
P+ +TY ++ ++ + +FKEA + + + LKP M+H ++ Y + G +
Sbjct: 498 LVPNIITYTTLVDVYGRSGRFKEAVDCIEAM---KADGLKPSPTMYHALVNAYAQRGLAD 554
Query: 222 KARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSKIYDQMQ---RAGLQPDVVSYALLI 278
A + M G++ STV NSL++ + +++ + +Q GL+PDV++Y L+
Sbjct: 555 HALNVVKAMRADGLEASTVVLNSLINAFGEDRRIAEAFSVLQFMKENGLRPDVITYTTLM 614
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAF 316
A + + E+ ++EEM+ +G P KA +L A
Sbjct: 615 KALIRVEQFEKVPVIYEEMITSGCAPDRKARAMLRSAL 652
>gi|413944457|gb|AFW77106.1| hypothetical protein ZEAMMB73_510937 [Zea mays]
Length = 492
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 108/410 (26%), Positives = 208/410 (50%), Gaps = 20/410 (4%)
Query: 25 EAGKKNWRRLMNQIEEVGSAVAVLRSERTRG-----QP-------LPKDLVLGTLVRLKQ 72
EAG++ + +I + +LR E T+ +P LP ++ R+
Sbjct: 59 EAGRRRKEEVNRKIASRKALSVILRREATKAVLDKRKPGKGTRRLLPGTVLEALHDRVAA 118
Query: 73 LKKWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVV 132
L+ W+ +V E +R Q W+ + ++ LIT GK KA ++ M +G AP++
Sbjct: 119 LR-WDSALKVFELMRDQVWYKPHIGIYIKLITMLGKCKQPEKAHQLFQAMIDEGCAPNLQ 177
Query: 133 SHTALMEAYGRGGRYKNAEAIFRRMQ-SSGPRPSALTYQIILKLFVEANKFKEAEEVFMT 191
S+TAL+ Y R GR++ A + RM+ + G +P TY I++K + A F E+V
Sbjct: 178 SYTALVSTYSRSGRFREAFDLLDRMKDTPGCQPDVQTYSILIKSCLHAYDF---EKVKSL 234
Query: 192 LLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNS-LMSFET 250
L D ++ + P+ ++ +I Y KAG + + M + + T NS L +F +
Sbjct: 235 LADMARAGIPPNTVTYNTLIDAYGKAGRFAEMESTLLKMLSQNCKPDVWTMNSTLRAFGS 294
Query: 251 N--YKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKA 308
+ + + Y++ Q +G+ P++ +Y +L+++YGKA+ E+ AV E M T
Sbjct: 295 SGQIETMESCYEKFQASGIVPNIKTYNILLDSYGKAKMYEKMGAVMEYMQKYYYSWTIVT 354
Query: 309 YNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLK 368
YN+++DAF +G ++Q +F+ M+ +R P+ + +++ AY A +++ + R ++
Sbjct: 355 YNVVIDAFGRAGDLEQMEYIFRLMKSERIKPNCVTLCSVVRAYGRAGEVKKIKTALRIIE 414
Query: 369 QDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIM 418
+++ + L+ Y +V L +M +I D M+ + KP++ TT++
Sbjct: 415 NSDITLDIVFFNCLVDAYGRVGCLAEMWDILDLMKEHRCKPDKVTCTTMI 464
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 82/318 (25%), Positives = 158/318 (49%), Gaps = 10/318 (3%)
Query: 112 FNKAEKVLSFM-NKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQ 170
++ A KV M ++ Y P + + L+ G+ + + A +F+ M G P+ +Y
Sbjct: 121 WDSALKVFELMRDQVWYKPHIGIYIKLITMLGKCKQPEKAHQLFQAMIDEGCAPNLQSYT 180
Query: 171 IILKLFVEANKFKEAEEVFMTLLDEEK-SP-LKPDQKMFHMMIYMYKKAGGYEKARKLFA 228
++ + + +F+EA LLD K +P +PD + + ++I A +EK + L A
Sbjct: 181 ALVSTYSRSGRFREA----FDLLDRMKDTPGCQPDVQTYSILIKSCLHAYDFEKVKSLLA 236
Query: 229 LMAERGVQQSTVTYNSLMSF---ETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKAR 285
MA G+ +TVTYN+L+ + E+ +M +PDV + + A+G +
Sbjct: 237 DMARAGIPPNTVTYNTLIDAYGKAGRFAEMESTLLKMLSQNCKPDVWTMNSTLRAFGSSG 296
Query: 286 REEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYT 345
+ E + +E+ +G+ P K YNILLD++ + M ++ V + M++ S I +Y
Sbjct: 297 QIETMESCYEKFQASGIVPNIKTYNILLDSYGKAKMYEKMGAVMEYMQKYYYSWTIVTYN 356
Query: 346 TMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVN 405
++ A+ A D+E E FR +K + PN +T ++++ Y + ++K+ + +
Sbjct: 357 VVIDAFGRAGDLEQMEYIFRLMKSERIKPNCVTLCSVVRAYGRAGEVKKIKTALRIIENS 416
Query: 406 GIKPNQTIFTTIMDAYGK 423
I + F ++DAYG+
Sbjct: 417 DITLDIVFFNCLVDAYGR 434
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 99/199 (49%), Gaps = 2/199 (1%)
Query: 257 KIYDQMQ-RAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDA 315
K+++ M+ + +P + Y LI GK ++ E+A +F+ M+D G P ++Y L+
Sbjct: 126 KVFELMRDQVWYKPHIGIYIKLITMLGKCKQPEKAHQLFQAMIDEGCAPNLQSYTALVST 185
Query: 316 FAISGMVDQARTVFKCMR-RDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVP 374
++ SG +A + M+ C PD+ +Y+ ++ + ++A D E + + + G P
Sbjct: 186 YSRSGRFREAFDLLDRMKDTPGCQPDVQTYSILIKSCLHAYDFEKVKSLLADMARAGIPP 245
Query: 375 NVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWY 434
N +TY TLI Y K +M KM KP+ + + A+G + ++ Y
Sbjct: 246 NTVTYNTLIDAYGKAGRFAEMESTLLKMLSQNCKPDVWTMNSTLRAFGSSGQIETMESCY 305
Query: 435 KEMESCGFPPDQKAKNILL 453
++ ++ G P+ K NILL
Sbjct: 306 EKFQASGIVPNIKTYNILL 324
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/233 (24%), Positives = 108/233 (46%), Gaps = 6/233 (2%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + + LI AYGK G F + E L M + P V + + + A+G G+ + E+ +
Sbjct: 246 NTVTYNTLIDAYGKAGRFAEMESTLLKMLSQNCKPDVWTMNSTLRAFGSSGQIETMESCY 305
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
+ Q+SG P+ TY I+L + +A +++ V + +K ++++I +
Sbjct: 306 EKFQASGIVPNIKTYNILLDSYGKAKMYEKMGAVMEYM---QKYYYSWTIVTYNVVIDAF 362
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSKIYDQM---QRAGLQPDV 271
+AG E+ +F LM ++ + VT S++ EV KI + + + + D+
Sbjct: 363 GRAGDLEQMEYIFRLMKSERIKPNCVTLCSVVRAYGRAGEVKKIKTALRIIENSDITLDI 422
Query: 272 VSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQ 324
V + L++AYG+ E + + M + +P ++ F I G+ D
Sbjct: 423 VFFNCLVDAYGRVGCLAEMWDILDLMKEHRCKPDKVTCTTMIKWFLIKGIDDH 475
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 86/208 (41%), Gaps = 2/208 (0%)
Query: 284 ARREEEALAVFEEMLD-AGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDIC 342
A R + AL VFE M D +P Y L+ ++A +F+ M + C+P++
Sbjct: 118 ALRWDSALKVFELMRDQVWYKPHIGIYIKLITMLGKCKQPEKAHQLFQAMIDEGCAPNLQ 177
Query: 343 SYTTMLSAYVNASDMEGAEKFFRRLK-QDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDK 401
SYT ++S Y + A R+K G P+V TY LIK + EK+ +
Sbjct: 178 SYTALVSTYSRSGRFREAFDLLDRMKDTPGCQPDVQTYSILIKSCLHAYDFEKVKSLLAD 237
Query: 402 MRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADE 461
M GI PN + T++DAYGK F +M S PD N L ++ +
Sbjct: 238 MARAGIPPNTVTYNTLIDAYGKAGRFAEMESTLLKMLSQNCKPDVWTMNSTLRAFGSSGQ 297
Query: 462 RNEANELLGNFNHPNNEPGINGLSISVD 489
F P I +I +D
Sbjct: 298 IETMESCYEKFQASGIVPNIKTYNILLD 325
>gi|115482788|ref|NP_001064987.1| Os10g0501700 [Oryza sativa Japonica Group]
gi|22165069|gb|AAM93686.1| putative leaf protein [Oryza sativa Japonica Group]
gi|31432904|gb|AAP54480.1| Rf1 protein, mitochondrial precursor, putative [Oryza sativa
Japonica Group]
gi|113639596|dbj|BAF26901.1| Os10g0501700 [Oryza sativa Japonica Group]
gi|125575306|gb|EAZ16590.1| hypothetical protein OsJ_32064 [Oryza sativa Japonica Group]
Length = 454
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 102/396 (25%), Positives = 182/396 (45%), Gaps = 46/396 (11%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
+I A K ++A +VL+ M P+ ++ ++M Y G+ + A IFR+M S G
Sbjct: 52 IIAALSKAQAMDRAMEVLTVM----VMPNCFTYNSIMHGYCSSGQSEKAIGIFRKMCSDG 107
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
P +TY ++ + K EA ++F +++ K LKPD + +++ Y G
Sbjct: 108 IEPDVVTYNSLMDYLCKNGKCTEARKIFDSMV---KRGLKPDITTYGTLLHGYASKGALV 164
Query: 222 KARKLFALMAERGVQQSTVTYNSLMSFETNYK---EVSKIYDQMQRAGLQPDVVSYALLI 278
+ L ALM + G+Q +N L+ T + EV ++ +M++ GL P+ V+Y +I
Sbjct: 165 EMHDLLALMVQNGMQLDHHVFNILICAYTKQEKVDEVVLVFSKMRQQGLTPNAVNYRTVI 224
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAY----------------------------- 309
+ K R ++A+ FE+M+D G+ P Y
Sbjct: 225 DGLCKLGRLDDAMLNFEQMIDKGLTPNVVVYTSLIHALCTYDKWEKAEELIFEILDQGIN 284
Query: 310 ------NILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKF 363
N +LD+ G V +++ +F + +PD+ +Y+T++ Y A M+GA K
Sbjct: 285 PNIVFFNTILDSLCKEGRVIESKKLFDLLGHIGVNPDVITYSTLIDGYCLAGKMDGAMKL 344
Query: 364 FRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGK 423
+ G P+ +TY TLI GY K+N +E + ++ +M NG+ P+ + I+ +
Sbjct: 345 LTGMVSVGLKPDSVTYSTLINGYCKINRMEDALALFKEMESNGVNPDIITYNIILHGLFR 404
Query: 424 NKDFDSAVVWYKEMESCGFPPDQKAKNILL-SLAKT 458
+ +A Y + G + NI+L AKT
Sbjct: 405 TRRTAAAKELYARITESGTQLELSTYNIILMDFAKT 440
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 90/344 (26%), Positives = 153/344 (44%), Gaps = 10/344 (2%)
Query: 129 PSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEV 188
P VVS+ +++ + G A + M P A+TY I+ +A A EV
Sbjct: 9 PDVVSYNTIIDGLFKEGDVDKAYITYHEMLDRRVSPDAVTYNSIIAALSKAQAMDRAMEV 68
Query: 189 FMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSF 248
+ + P+ ++ +++ Y +G EKA +F M G++ VTYNSLM +
Sbjct: 69 LTVM-------VMPNCFTYNSIMHGYCSSGQSEKAIGIFRKMCSDGIEPDVVTYNSLMDY 121
Query: 249 ET---NYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPT 305
E KI+D M + GL+PD+ +Y L++ Y E + M+ G++
Sbjct: 122 LCKNGKCTEARKIFDSMVKRGLKPDITTYGTLLHGYASKGALVEMHDLLALMVQNGMQLD 181
Query: 306 HKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFR 365
H +NIL+ A+ VD+ VF MR+ +P+ +Y T++ ++ A F
Sbjct: 182 HHVFNILICAYTKQEKVDEVVLVFSKMRQQGLTPNAVNYRTVIDGLCKLGRLDDAMLNFE 241
Query: 366 RLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNK 425
++ G PNV+ Y +LI + EK E+ ++ GI PN F TI+D+ K
Sbjct: 242 QMIDKGLTPNVVVYTSLIHALCTYDKWEKAEELIFEILDQGINPNIVFFNTILDSLCKEG 301
Query: 426 DFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELL 469
+ + + G PD + L+ A + + A +LL
Sbjct: 302 RVIESKKLFDLLGHIGVNPDVITYSTLIDGYCLAGKMDGAMKLL 345
Score = 108 bits (270), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 68/276 (24%), Positives = 132/276 (47%), Gaps = 3/276 (1%)
Query: 194 DEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYK 253
D+ + P PD ++ +I K G +KA + M +R V VTYNS+++ + +
Sbjct: 3 DDGRCP--PDVVSYNTIIDGLFKEGDVDKAYITYHEMLDRRVSPDAVTYNSIIAALSKAQ 60
Query: 254 EVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILL 313
+ + + + + P+ +Y +++ Y + + E+A+ +F +M G+ P YN L+
Sbjct: 61 AMDRAMEVLT-VMVMPNCFTYNSIMHGYCSSGQSEKAIGIFRKMCSDGIEPDVVTYNSLM 119
Query: 314 DAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFV 373
D +G +AR +F M + PDI +Y T+L Y + + + Q+G
Sbjct: 120 DYLCKNGKCTEARKIFDSMVKRGLKPDITTYGTLLHGYASKGALVEMHDLLALMVQNGMQ 179
Query: 374 PNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVW 433
+ + LI Y K +++++ ++ KMR G+ PN + T++D K D A++
Sbjct: 180 LDHHVFNILICAYTKQEKVDEVVLVFSKMRQQGLTPNAVNYRTVIDGLCKLGRLDDAMLN 239
Query: 434 YKEMESCGFPPDQKAKNILLSLAKTADERNEANELL 469
+++M G P+ L+ T D+ +A EL+
Sbjct: 240 FEQMIDKGLTPNVVVYTSLIHALCTYDKWEKAEELI 275
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 65/294 (22%), Positives = 140/294 (47%), Gaps = 6/294 (2%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
L+ Y +G + +L+ M + G L+ AY + + +F +M+ G
Sbjct: 153 LLHGYASKGALVEMHDLLALMVQNGMQLDHHVFNILICAYTKQEKVDEVVLVFSKMRQQG 212
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
P+A+ Y+ ++ + + +A F ++D+ L P+ ++ +I+ +E
Sbjct: 213 LTPNAVNYRTVIDGLCKLGRLDDAMLNFEQMIDK---GLTPNVVVYTSLIHALCTYDKWE 269
Query: 222 KARKLFALMAERGVQQSTVTYNSLM---SFETNYKEVSKIYDQMQRAGLQPDVVSYALLI 278
KA +L + ++G+ + V +N+++ E E K++D + G+ PDV++Y+ LI
Sbjct: 270 KAEELIFEILDQGINPNIVFFNTILDSLCKEGRVIESKKLFDLLGHIGVNPDVITYSTLI 329
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCS 338
+ Y A + + A+ + M+ G++P Y+ L++ + ++ A +FK M + +
Sbjct: 330 DGYCLAGKMDGAMKLLTGMVSVGLKPDSVTYSTLINGYCKINRMEDALALFKEMESNGVN 389
Query: 339 PDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNL 392
PDI +Y +L A++ + R+ + G + TY ++ +AK N+L
Sbjct: 390 PDIITYNIILHGLFRTRRTAAAKELYARITESGTQLELSTYNIILMDFAKTNSL 443
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 76/329 (23%), Positives = 144/329 (43%), Gaps = 10/329 (3%)
Query: 164 PSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKA 223
P ++Y I+ + +A + +LD SP D ++ +I KA ++A
Sbjct: 9 PDVVSYNTIIDGLFKEGDVDKAYITYHEMLDRRVSP---DAVTYNSIIAALSKAQAMDRA 65
Query: 224 RKLFALMAERGVQQSTVTYNSLMSFETNYKEVSK---IYDQMQRAGLQPDVVSYALLINA 280
++ +M V + TYNS+M + + K I+ +M G++PDVV+Y L++
Sbjct: 66 MEVLTVM----VMPNCFTYNSIMHGYCSSGQSEKAIGIFRKMCSDGIEPDVVTYNSLMDY 121
Query: 281 YGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPD 340
K + EA +F+ M+ G++P Y LL +A G + + + M ++ D
Sbjct: 122 LCKNGKCTEARKIFDSMVKRGLKPDITTYGTLLHGYASKGALVEMHDLLALMVQNGMQLD 181
Query: 341 ICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYD 400
+ ++ AY ++ F +++Q G PN + Y T+I G K+ L+ M ++
Sbjct: 182 HHVFNILICAYTKQEKVDEVVLVFSKMRQQGLTPNAVNYRTVIDGLCKLGRLDDAMLNFE 241
Query: 401 KMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTAD 460
+M G+ PN ++T+++ A ++ A E+ G P+ N +L
Sbjct: 242 QMIDKGLTPNVVVYTSLIHALCTYDKWEKAEELIFEILDQGINPNIVFFNTILDSLCKEG 301
Query: 461 ERNEANELLGNFNHPNNEPGINGLSISVD 489
E+ +L H P + S +D
Sbjct: 302 RVIESKKLFDLLGHIGVNPDVITYSTLID 330
>gi|15221691|ref|NP_176501.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169915|sp|Q9CAN0.1|PPR99_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g63130, mitochondrial; Flags: Precursor
gi|12323261|gb|AAG51613.1|AC010795_17 unknown protein; 64081-65973 [Arabidopsis thaliana]
gi|22136016|gb|AAM91590.1| unknown protein [Arabidopsis thaliana]
gi|23197834|gb|AAN15444.1| unknown protein [Arabidopsis thaliana]
gi|332195938|gb|AEE34059.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 630
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 100/411 (24%), Positives = 204/411 (49%), Gaps = 10/411 (2%)
Query: 48 LRSERTRGQPLPKDLVLGTLVR-LKQLKKWNVVSEVLEWLRIQSWWDFNEMDFLMLITAY 106
L + + +P P + L+ + ++ K+++V + E ++ N + +LI +
Sbjct: 68 LFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQ-NLGISHNLYTYSILINCF 126
Query: 107 GKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSA 166
++ + A VL+ M K GY P +V+ +L+ + G R +A ++ +M G +P +
Sbjct: 127 CRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDS 186
Query: 167 LTYQIILKLFVEANKFKEAEEVFMTLLDEEKSP-LKPDQKMFHMMIYMYKKAGGYEKARK 225
T+ ++ N+ EA + L+D +PD + +++ K G + A
Sbjct: 187 FTFNTLIHGLFRHNRASEA----VALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALS 242
Query: 226 LFALMAERGVQQSTVTYNSLMSFETNYKEVS---KIYDQMQRAGLQPDVVSYALLINAYG 282
L M + ++ V YN+++ NYK V+ ++ +M G++P+VV+Y LI
Sbjct: 243 LLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLC 302
Query: 283 KARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDIC 342
R +A + +M++ + P ++ L+DAF G + +A ++ M + PDI
Sbjct: 303 NYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIF 362
Query: 343 SYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKM 402
+Y+++++ + ++ A+ F + PNV+TY TLIKG+ K +++ ME++ +M
Sbjct: 363 TYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREM 422
Query: 403 RVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILL 453
G+ N +TT++ + + ++ D+A + +K+M S G PD +ILL
Sbjct: 423 SQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILL 473
Score = 155 bits (393), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 95/357 (26%), Positives = 179/357 (50%), Gaps = 6/357 (1%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
+I A + N A + + M+ KG P+VV++ +L+ GR+ +A + M
Sbjct: 262 IIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERK 321
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
P+ +T+ ++ FV+ K EAE+++ ++ K + PD + +I + +
Sbjct: 322 INPNVVTFSALIDAFVKEGKLVEAEKLYDEMI---KRSIDPDIFTYSSLINGFCMHDRLD 378
Query: 222 KARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSK---IYDQMQRAGLQPDVVSYALLI 278
+A+ +F LM + + VTYN+L+ K V + ++ +M + GL + V+Y LI
Sbjct: 379 EAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLI 438
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCS 338
+ + +AR + A VF++M+ GV P Y+ILLD +G V+ A VF+ ++R +
Sbjct: 439 HGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKME 498
Query: 339 PDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEI 398
PDI +Y M+ A +E F L G PNV+TY T++ G+ + E+ +
Sbjct: 499 PDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADAL 558
Query: 399 YDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSL 455
+ +M+ G P+ + T++ A+ ++ D ++ +EM SC F D ++ ++
Sbjct: 559 FREMKEEGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIGLVTNM 615
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 91/356 (25%), Positives = 168/356 (47%), Gaps = 6/356 (1%)
Query: 101 MLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSS 160
+++ K+GD + A +L M + P VV + +++A +A +F M +
Sbjct: 226 IVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNK 285
Query: 161 GPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGY 220
G RP+ +TY +++ ++ +A + +++ + + P+ F +I + K G
Sbjct: 286 GIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERK---INPNVVTFSALIDAFVKEGKL 342
Query: 221 EKARKLFALMAERGVQQSTVTYNSLM---SFETNYKEVSKIYDQMQRAGLQPDVVSYALL 277
+A KL+ M +R + TY+SL+ E +++ M P+VV+Y L
Sbjct: 343 VEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTL 402
Query: 278 INAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRC 337
I + KA+R +E + +F EM G+ Y L+ F + D A+ VFK M D
Sbjct: 403 IKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGV 462
Query: 338 SPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMME 397
PDI +Y+ +L N +E A F L++ P++ TY +I+G K +E +
Sbjct: 463 LPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWD 522
Query: 398 IYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILL 453
++ + + G+KPN +TT+M + + + A ++EM+ G PD N L+
Sbjct: 523 LFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLI 578
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 89/366 (24%), Positives = 148/366 (40%), Gaps = 25/366 (6%)
Query: 124 KKGYAPSVVSHTALMEAYGRGGRYK---------------NAEAIFRRMQSSGPRPSALT 168
K G AP SH + G RY +A +F M S P PS +
Sbjct: 24 KCGTAPPSFSHCSFWVRDFSGVRYDYRKISINRLNDLKLDDAVNLFGDMVKSRPFPSIVE 83
Query: 169 YQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMF--HMMIYMYKKAGGYEKARKL 226
+ +L + NKF + L E+ L ++ ++I + + A +
Sbjct: 84 FSKLLSAIAKMNKFD-----LVISLGEQMQNLGISHNLYTYSILINCFCRRSQLSLALAV 138
Query: 227 FALMAERGVQQSTVTYNSLMSFETNYKEVS---KIYDQMQRAGLQPDVVSYALLINAYGK 283
A M + G + VT NSL++ + +S + QM G QPD ++ LI+ +
Sbjct: 139 LAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFR 198
Query: 284 ARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICS 343
R EA+A+ + M+ G +P Y I+++ G +D A ++ K M + + P +
Sbjct: 199 HNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVI 258
Query: 344 YTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMR 403
Y T++ A N ++ A F + G PNV+TY +LI+ + M
Sbjct: 259 YNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMI 318
Query: 404 VNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERN 463
I PN F+ ++DA+ K A Y EM PD + L++ D +
Sbjct: 319 ERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLD 378
Query: 464 EANELL 469
EA +
Sbjct: 379 EAKHMF 384
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/270 (24%), Positives = 120/270 (44%), Gaps = 3/270 (1%)
Query: 223 ARKLFALMAERGVQQSTVTYNSLMSF---ETNYKEVSKIYDQMQRAGLQPDVVSYALLIN 279
A LF M + S V ++ L+S + V + +QMQ G+ ++ +Y++LIN
Sbjct: 65 AVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSILIN 124
Query: 280 AYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSP 339
+ + + ALAV +M+ G P N LL+ F + A ++ M P
Sbjct: 125 CFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQP 184
Query: 340 DICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIY 399
D ++ T++ + A R+ G P+++TYG ++ G K +++ + +
Sbjct: 185 DSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLL 244
Query: 400 DKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTA 459
KM I+P I+ TI+DA K+ + A+ + EM++ G P+ N L+
Sbjct: 245 KKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNY 304
Query: 460 DERNEANELLGNFNHPNNEPGINGLSISVD 489
++A+ LL + P + S +D
Sbjct: 305 GRWSDASRLLSDMIERKINPNVVTFSALID 334
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 102/206 (49%), Gaps = 6/206 (2%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + + LI + K ++ ++ M+++G + V++T L+ + + NA+ +F
Sbjct: 395 NVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVF 454
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
++M S G P +TY I+L K + A VF L ++S ++PD +++MI
Sbjct: 455 KQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYL---QRSKMEPDIYTYNIMIEGM 511
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETN---YKEVSKIYDQMQRAGLQPDV 271
KAG E LF ++ +GV+ + VTY ++MS +E ++ +M+ G PD
Sbjct: 512 CKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDS 571
Query: 272 VSYALLINAYGKARREEEALAVFEEM 297
+Y LI A+ + + + + EM
Sbjct: 572 GTYNTLIRAHLRDGDKAASAELIREM 597
>gi|125600636|gb|EAZ40212.1| hypothetical protein OsJ_24656 [Oryza sativa Japonica Group]
Length = 661
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 94/356 (26%), Positives = 180/356 (50%), Gaps = 6/356 (1%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
L+ Y K G AE+VL M++ G AP +++ L++AY R GR+++A + + M++ G
Sbjct: 298 LLKGYVKIGSLKNAEQVLDEMSQCGVAPDEATYSLLVDAYTRAGRWESARILLKEMEADG 357
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
+PS+ + IL F + ++++A F L + S ++PD+ +++MI + K
Sbjct: 358 VKPSSYVFSRILAGFRDRGEWQKA---FAVLREMHASGVRPDRHFYNVMIDTFGKYNCLG 414
Query: 222 KARKLFALMAERGVQQSTVTYNSLMSFETN---YKEVSKIYDQMQRAGLQPDVVSYALLI 278
A F M E G++ VT+N+L+ + +++D+M+ + +Y ++I
Sbjct: 415 HAMDAFDRMREEGIEPDVVTWNTLIDAHCKGGRHDRAIELFDEMRESNCPLGTTTYNIMI 474
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCS 338
N G+ +R E A+ EM + G+ P Y L+D + SG +A + M+ D
Sbjct: 475 NLLGEEQRWEGVEAMLAEMKEQGLVPNIITYTTLVDVYGRSGRFKEAVDCIEAMKADGLK 534
Query: 339 PDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEI 398
P Y +++AY + A + ++ DG + + +LI + + + + +
Sbjct: 535 PSPTMYHALVNAYAQRGLADHALNVVKAMRADGLEASTVVLNSLINAFGEDRRIAEAFSV 594
Query: 399 YDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLS 454
M+ NG++P+ +TT+M A + + F+ V Y+EM + G PD+KA+ +L S
Sbjct: 595 LQFMKENGLRPDVITYTTLMKALIRVEQFEKVPVIYEEMITSGCAPDRKARAMLRS 650
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 96/357 (26%), Positives = 175/357 (49%), Gaps = 9/357 (2%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
LI+A+ + + A ++L+ G P + TAL+ + G R AEA+F +G
Sbjct: 227 LISAFARARLPDAALELLASAQAIGLTPRSNAVTALISSLGSARRVAEAEALFLEFFLAG 286
Query: 162 P-RPSALTYQIILKLFVEANKFKEAEEVFMTLLDE-EKSPLKPDQKMFHMMIYMYKKAGG 219
+P Y +LK +V+ K AE+V LDE + + PD+ + +++ Y +AG
Sbjct: 287 EIKPRTRAYNALLKGYVKIGSLKNAEQV----LDEMSQCGVAPDEATYSLLVDAYTRAGR 342
Query: 220 YEKARKLFALMAERGVQQSTVTYNSLMSF---ETNYKEVSKIYDQMQRAGLQPDVVSYAL 276
+E AR L M GV+ S+ ++ +++ +++ + +M +G++PD Y +
Sbjct: 343 WESARILLKEMEADGVKPSSYVFSRILAGFRDRGEWQKAFAVLREMHASGVRPDRHFYNV 402
Query: 277 LINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDR 336
+I+ +GK A+ F+ M + G+ P +N L+DA G D+A +F MR
Sbjct: 403 MIDTFGKYNCLGHAMDAFDRMREEGIEPDVVTWNTLIDAHCKGGRHDRAIELFDEMRESN 462
Query: 337 CSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMM 396
C +Y M++ EG E +K+ G VPN+ITY TL+ Y + ++ +
Sbjct: 463 CPLGTTTYNIMINLLGEEQRWEGVEAMLAEMKEQGLVPNIITYTTLVDVYGRSGRFKEAV 522
Query: 397 EIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILL 453
+ + M+ +G+KP+ T++ +++AY + D A+ K M + G N L+
Sbjct: 523 DCIEAMKADGLKPSPTMYHALVNAYAQRGLADHALNVVKAMRADGLEASTVVLNSLI 579
Score = 105 bits (263), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 76/296 (25%), Positives = 138/296 (46%), Gaps = 4/296 (1%)
Query: 164 PSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKA 223
P +Y +L L + EA + L D +S L+PD +F +I + +A + A
Sbjct: 181 PDLASYSHLLALLLNTRDPPEAALLDRLLGDLRESRLEPDAPLFSDLISAFARARLPDAA 240
Query: 224 RKLFALMAERGVQQSTVTYNSLMSFETNYKEVSK---IYDQMQRAG-LQPDVVSYALLIN 279
+L A G+ + +L+S + + V++ ++ + AG ++P +Y L+
Sbjct: 241 LELLASAQAIGLTPRSNAVTALISSLGSARRVAEAEALFLEFFLAGEIKPRTRAYNALLK 300
Query: 280 AYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSP 339
Y K + A V +EM GV P Y++L+DA+ +G + AR + K M D P
Sbjct: 301 GYVKIGSLKNAEQVLDEMSQCGVAPDEATYSLLVDAYTRAGRWESARILLKEMEADGVKP 360
Query: 340 DICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIY 399
++ +L+ + + + + A R + G P+ Y +I + K N L M+ +
Sbjct: 361 SSYVFSRILAGFRDRGEWQKAFAVLREMHASGVRPDRHFYNVMIDTFGKYNCLGHAMDAF 420
Query: 400 DKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSL 455
D+MR GI+P+ + T++DA+ K D A+ + EM P NI+++L
Sbjct: 421 DRMREEGIEPDVVTWNTLIDAHCKGGRHDRAIELFDEMRESNCPLGTTTYNIMINL 476
Score = 88.6 bits (218), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 108/218 (49%), Gaps = 6/218 (2%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
LI A+ K G ++A ++ M + ++ ++ G R++ EA+ M+ G
Sbjct: 438 LIDAHCKGGRHDRAIELFDEMRESNCPLGTTTYNIMINLLGEEQRWEGVEAMLAEMKEQG 497
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
P+ +TY ++ ++ + +FKEA + + + LKP M+H ++ Y + G +
Sbjct: 498 LVPNIITYTTLVDVYGRSGRFKEAVDCIEAM---KADGLKPSPTMYHALVNAYAQRGLAD 554
Query: 222 KARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSKIYDQMQ---RAGLQPDVVSYALLI 278
A + M G++ STV NSL++ + +++ + +Q GL+PDV++Y L+
Sbjct: 555 HALNVVKAMRADGLEASTVVLNSLINAFGEDRRIAEAFSVLQFMKENGLRPDVITYTTLM 614
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAF 316
A + + E+ ++EEM+ +G P KA +L A
Sbjct: 615 KALIRVEQFEKVPVIYEEMITSGCAPDRKARAMLRSAL 652
>gi|326501502|dbj|BAK02540.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 673
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 101/358 (28%), Positives = 176/358 (49%), Gaps = 9/358 (2%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
LI+A+ + + A ++L+ G P + TAL+ A G GR AEA+F +G
Sbjct: 239 LISAFARAALPDAALELLASAQAIGLTPRSNAVTALISALGIAGRVPEAEALFLEFFLAG 298
Query: 162 P-RPSALTYQIILKLFVEANKFKEAEEVFMTLLDE-EKSPLKPDQKMFHMMIYMYKKAGG 219
+P Y +LK +V+ K AE V LDE + + PD+ + +++ Y +AG
Sbjct: 299 EIKPRTRAYNALLKGYVKIGSLKNAEHV----LDEMSECGVAPDEATYSLLVDAYTRAGR 354
Query: 220 YEKARKLFALMAERGVQQSTVTYNSLMSF---ETNYKEVSKIYDQMQRAGLQPDVVSYAL 276
+E AR L M GV+ S+ ++ +++ ++++ + +M +G+QPD Y +
Sbjct: 355 WESARILLKEMEADGVKPSSYVFSRILAGFRDRGDWQKAFAVLREMHASGVQPDRHFYNV 414
Query: 277 LINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDR 336
+I+ +GK A+ VF M G+ P +N L+DA G D A +FK MR
Sbjct: 415 MIDTFGKYNCLGHAMDVFNRMRGEGIEPDVVTWNTLIDAHCKGGRHDCAMELFKEMRESN 474
Query: 337 CSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMM 396
C P +Y M++ G E +K+ G VPN+ITY TL+ Y + ++ +
Sbjct: 475 CPPGTTTYNIMINLLGEQERWVGVETMMSEMKEQGLVPNIITYTTLVDVYGRSGRYKEAI 534
Query: 397 EIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLS 454
+ + M+ +G+KP+ T++ +++AY + D A+ K M + G N L++
Sbjct: 535 DCIEAMKADGLKPSPTMYHALVNAYAQRGLADHALNVVKAMRADGLEASTVVLNSLIN 592
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 91/356 (25%), Positives = 173/356 (48%), Gaps = 6/356 (1%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
L+ Y K G AE VL M++ G AP +++ L++AY R GR+++A + + M++ G
Sbjct: 310 LLKGYVKIGSLKNAEHVLDEMSECGVAPDEATYSLLVDAYTRAGRWESARILLKEMEADG 369
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
+PS+ + IL F + +++A F L + S ++PD+ +++MI + K
Sbjct: 370 VKPSSYVFSRILAGFRDRGDWQKA---FAVLREMHASGVQPDRHFYNVMIDTFGKYNCLG 426
Query: 222 KARKLFALMAERGVQQSTVTYNSLMSFETN---YKEVSKIYDQMQRAGLQPDVVSYALLI 278
A +F M G++ VT+N+L+ + +++ +M+ + P +Y ++I
Sbjct: 427 HAMDVFNRMRGEGIEPDVVTWNTLIDAHCKGGRHDCAMELFKEMRESNCPPGTTTYNIMI 486
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCS 338
N G+ R + EM + G+ P Y L+D + SG +A + M+ D
Sbjct: 487 NLLGEQERWVGVETMMSEMKEQGLVPNIITYTTLVDVYGRSGRYKEAIDCIEAMKADGLK 546
Query: 339 PDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEI 398
P Y +++AY + A + ++ DG + + +LI + + + + +
Sbjct: 547 PSPTMYHALVNAYAQRGLADHALNVVKAMRADGLEASTVVLNSLINAFGEDRRVVEAFSV 606
Query: 399 YDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLS 454
M+ N +P+ +TT+M A + + FD V Y+EM + G PD+KA+ +L S
Sbjct: 607 LQFMKENDFRPDVITYTTLMKALIRVEQFDKVPVIYEEMITSGCAPDRKARAMLRS 662
Score = 111 bits (278), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 76/296 (25%), Positives = 136/296 (45%), Gaps = 4/296 (1%)
Query: 164 PSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKA 223
P +Y +L + +A + L D S L+PD +F +I + +A + A
Sbjct: 193 PDLASYSHLLASLLNTRDPPDAAILERLLGDLRDSRLEPDAPLFSDLISAFARAALPDAA 252
Query: 224 RKLFALMAERGVQQSTVTYNSLMS---FETNYKEVSKIYDQMQRAG-LQPDVVSYALLIN 279
+L A G+ + +L+S E ++ + AG ++P +Y L+
Sbjct: 253 LELLASAQAIGLTPRSNAVTALISALGIAGRVPEAEALFLEFFLAGEIKPRTRAYNALLK 312
Query: 280 AYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSP 339
Y K + A V +EM + GV P Y++L+DA+ +G + AR + K M D P
Sbjct: 313 GYVKIGSLKNAEHVLDEMSECGVAPDEATYSLLVDAYTRAGRWESARILLKEMEADGVKP 372
Query: 340 DICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIY 399
++ +L+ + + D + A R + G P+ Y +I + K N L M+++
Sbjct: 373 SSYVFSRILAGFRDRGDWQKAFAVLREMHASGVQPDRHFYNVMIDTFGKYNCLGHAMDVF 432
Query: 400 DKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSL 455
++MR GI+P+ + T++DA+ K D A+ +KEM PP NI+++L
Sbjct: 433 NRMRGEGIEPDVVTWNTLIDAHCKGGRHDCAMELFKEMRESNCPPGTTTYNIMINL 488
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 63/251 (25%), Positives = 112/251 (44%), Gaps = 35/251 (13%)
Query: 101 MLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSS 160
++I +GK A V + M +G P VV+ L++A+ +GGR+ A +F+ M+ S
Sbjct: 414 VMIDTFGKYNCLGHAMDVFNRMRGEGIEPDVVTWNTLIDAHCKGGRHDCAMELFKEMRES 473
Query: 161 GPRPSALTYQIILKLFVEANKFKEAEEV---------------FMTLLDE---------- 195
P TY I++ L E ++ E + + TL+D
Sbjct: 474 NCPPGTTTYNIMINLLGEQERWVGVETMMSEMKEQGLVPNIITYTTLVDVYGRSGRYKEA 533
Query: 196 -------EKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLM-S 247
+ LKP M+H ++ Y + G + A + M G++ STV NSL+ +
Sbjct: 534 IDCIEAMKADGLKPSPTMYHALVNAYAQRGLADHALNVVKAMRADGLEASTVVLNSLINA 593
Query: 248 FETNYK--EVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPT 305
F + + E + M+ +PDV++Y L+ A + + ++ ++EEM+ +G P
Sbjct: 594 FGEDRRVVEAFSVLQFMKENDFRPDVITYTTLMKALIRVEQFDKVPVIYEEMITSGCAPD 653
Query: 306 HKAYNILLDAF 316
KA +L A
Sbjct: 654 RKARAMLRSAL 664
>gi|296083865|emb|CBI24253.3| unnamed protein product [Vitis vinifera]
Length = 582
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 113/427 (26%), Positives = 201/427 (47%), Gaps = 12/427 (2%)
Query: 67 LVRLKQLKKWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKG 126
L RL Q K+ N V + I + + + LI K G A +L+ M +KG
Sbjct: 148 LCRLGQWKEANTVLNAMAEHGIHP----DVVTYTGLIDGLCKDGRATHAMDLLNLMVEKG 203
Query: 127 YAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAE 186
PS V++ L+ + G +A I R M G + +TY ++K + K EA
Sbjct: 204 EEPSNVTYNVLLSGLCKEGLVIDAFKILRMMIEKGKKADVVTYNTLMKGLCDKGKVDEAL 263
Query: 187 EVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLM 246
++F ++ D E L+P+ F+M+I K G KA K+ M ++G + VTYN L+
Sbjct: 264 KLFNSMFDNENC-LEPNVFTFNMLIGGLCKEGRLTKAVKIHRKMVKKGSCGNLVTYNMLL 322
Query: 247 SF---ETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVR 303
KE +++ Q+ G P+ +Y++LI+ + K R A +F EM G+
Sbjct: 323 GGCLKAGKIKEAMELWKQVLDLGFVPNSFTYSILIDGFCKMRMLNIAKGLFCEMRTHGLN 382
Query: 304 PTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKF 363
P YN L+ + G ++QA+++F+ M C PDI S+ TM+ + A D + ++
Sbjct: 383 PALFDYNTLMASLCKEGSLEQAKSLFQEMGNANCEPDIISFNTMIDGTLKAGDFQFVKEL 442
Query: 364 FRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGK 423
++ + G P+ +T+ TLI +K+ L++ ++M +G P+ ++ +++
Sbjct: 443 QMKMVEMGLRPDALTFSTLINRLSKLGELDEAKSALERMVASGFTPDALVYDSLLKGLSS 502
Query: 424 NKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGING 483
D + +M + G D+K + +L+ + + + ELL F +E G
Sbjct: 503 KGDTTEIINLLHQMAAKGTVLDRKIVSTILTCLCHSIQEVDVMELLPTFFQGTSE----G 558
Query: 484 LSISVDE 490
SIS +E
Sbjct: 559 ASISCNE 565
Score = 142 bits (358), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 95/380 (25%), Positives = 187/380 (49%), Gaps = 8/380 (2%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + + L+ + G + +A VL+ M + G P VV++T L++ + GR +A +
Sbjct: 137 NVVTYSCLVHGLCRLGQWKEANTVLNAMAEHGIHPDVVTYTGLIDGLCKDGRATHAMDLL 196
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
M G PS +TY ++L + +A ++ ++++ K K D ++ ++
Sbjct: 197 NLMVEKGEEPSNVTYNVLLSGLCKEGLVIDAFKILRMMIEKGK---KADVVTYNTLMKGL 253
Query: 215 KKAGGYEKARKLFALM--AERGVQQSTVTYNSL---MSFETNYKEVSKIYDQMQRAGLQP 269
G ++A KLF M E ++ + T+N L + E + KI+ +M + G
Sbjct: 254 CDKGKVDEALKLFNSMFDNENCLEPNVFTFNMLIGGLCKEGRLTKAVKIHRKMVKKGSCG 313
Query: 270 DVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVF 329
++V+Y +L+ KA + +EA+ +++++LD G P Y+IL+D F M++ A+ +F
Sbjct: 314 NLVTYNMLLGGCLKAGKIKEAMELWKQVLDLGFVPNSFTYSILIDGFCKMRMLNIAKGLF 373
Query: 330 KCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKV 389
MR +P + Y T++++ +E A+ F+ + P++I++ T+I G K
Sbjct: 374 CEMRTHGLNPALFDYNTLMASLCKEGSLEQAKSLFQEMGNANCEPDIISFNTMIDGTLKA 433
Query: 390 NNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAK 449
+ + + E+ KM G++P+ F+T+++ K + D A + M + GF PD
Sbjct: 434 GDFQFVKELQMKMVEMGLRPDALTFSTLINRLSKLGELDEAKSALERMVASGFTPDALVY 493
Query: 450 NILLSLAKTADERNEANELL 469
+ LL + + E LL
Sbjct: 494 DSLLKGLSSKGDTTEIINLL 513
Score = 129 bits (324), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 92/364 (25%), Positives = 163/364 (44%), Gaps = 8/364 (2%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + L+ K G ++A ++L M KKG+ VV + L+ + G + +F
Sbjct: 67 NSVTCTTLMDGLCKDGRMDEAMELLEAMKKKGFDADVVLYGTLISGFCNNGNLDRGKELF 126
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
M G + +TY ++ ++KEA V + + + PD + +I
Sbjct: 127 DEMLGKGISANVVTYSCLVHGLCRLGQWKEANTVLNAMAEH---GIHPDVVTYTGLIDGL 183
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSLMSF---ETNYKEVSKIYDQMQRAGLQPDV 271
K G A L LM E+G + S VTYN L+S E + KI M G + DV
Sbjct: 184 CKDGRATHAMDLLNLMVEKGEEPSNVTYNVLLSGLCKEGLVIDAFKILRMMIEKGKKADV 243
Query: 272 VSYALLINAYGKARREEEALAVFEEMLD--AGVRPTHKAYNILLDAFAISGMVDQARTVF 329
V+Y L+ + +EAL +F M D + P +N+L+ G + +A +
Sbjct: 244 VTYNTLMKGLCDKGKVDEALKLFNSMFDNENCLEPNVFTFNMLIGGLCKEGRLTKAVKIH 303
Query: 330 KCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKV 389
+ M + ++ +Y +L + A ++ A + ++++ GFVPN TY LI G+ K+
Sbjct: 304 RKMVKKGSCGNLVTYNMLLGGCLKAGKIKEAMELWKQVLDLGFVPNSFTYSILIDGFCKM 363
Query: 390 NNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAK 449
L ++ +MR +G+ P + T+M + K + A ++EM + PD +
Sbjct: 364 RMLNIAKGLFCEMRTHGLNPALFDYNTLMASLCKEGSLEQAKSLFQEMGNANCEPDIISF 423
Query: 450 NILL 453
N ++
Sbjct: 424 NTMI 427
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 81/373 (21%), Positives = 160/373 (42%), Gaps = 43/373 (11%)
Query: 101 MLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSS 160
+++ + G +A ++ M +K +P +VS+ L+ + + K A + M+++
Sbjct: 3 IVLKGLCRNGGVFEAMGLIREMGRKSVSPDIVSYNTLINGLCKAKKLKEAVGLLLEMEAA 62
Query: 161 GPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGY 220
G P+++T ++ + + EA E+ + +K D ++ +I + G
Sbjct: 63 GCFPNSVTCTTLMDGLCKDGRMDEAMELLEAM---KKKGFDADVVLYGTLISGFCNNGNL 119
Query: 221 EKARKLFALMAERGVQQSTVTYNSL---MSFETNYKEVSKIYDQMQRAGLQPDVVSYALL 277
++ ++LF M +G+ + VTY+ L + +KE + + + M G+ PDVV+Y L
Sbjct: 120 DRGKELFDEMLGKGISANVVTYSCLVHGLCRLGQWKEANTVLNAMAEHGIHPDVVTYTGL 179
Query: 278 INAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRC 337
I+ K R A+ + M++ G P++ YN+LL G+V A
Sbjct: 180 IDGLCKDGRATHAMDLLNLMVEKGEEPSNVTYNVLLSGLCKEGLVIDAF----------- 228
Query: 338 SPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMME 397
K R + + G +V+TY TL+KG +++ ++
Sbjct: 229 ------------------------KILRMMIEKGKKADVVTYNTLMKGLCDKGKVDEALK 264
Query: 398 IYDKM--RVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSL 455
+++ M N ++PN F ++ K AV +++M G + N+LL
Sbjct: 265 LFNSMFDNENCLEPNVFTFNMLIGGLCKEGRLTKAVKIHRKMVKKGSCGNLVTYNMLLGG 324
Query: 456 AKTADERNEANEL 468
A + EA EL
Sbjct: 325 CLKAGKIKEAMEL 337
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 73/160 (45%)
Query: 310 NILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQ 369
NI+L +G V +A + + M R SPDI SY T+++ A ++ A ++
Sbjct: 2 NIVLKGLCRNGGVFEAMGLIREMGRKSVSPDIVSYNTLINGLCKAKKLKEAVGLLLEMEA 61
Query: 370 DGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDS 429
G PN +T TL+ G K +++ ME+ + M+ G + ++ T++ + N + D
Sbjct: 62 AGCFPNSVTCTTLMDGLCKDGRMDEAMELLEAMKKKGFDADVVLYGTLISGFCNNGNLDR 121
Query: 430 AVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELL 469
+ EM G + + L+ + EAN +L
Sbjct: 122 GKELFDEMLGKGISANVVTYSCLVHGLCRLGQWKEANTVL 161
>gi|302821481|ref|XP_002992403.1| hypothetical protein SELMODRAFT_42645 [Selaginella moellendorffii]
gi|300139819|gb|EFJ06553.1| hypothetical protein SELMODRAFT_42645 [Selaginella moellendorffii]
Length = 448
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 99/399 (24%), Positives = 194/399 (48%), Gaps = 7/399 (1%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
+ + + LI + K DF +A ++L M K+G P + +++ GR +A +
Sbjct: 32 DSITYSTLINGFCKARDFQQAYRLLDEMEKRGIVPHNAVYNTIIKGLCDNGRVDSALVHY 91
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
R MQ PS +TY I++ ++ + +A + L D ++ P+ ++ +I +
Sbjct: 92 RDMQRHCA-PSVITYTILVDALCKSARISDAS---LILEDMIEAGCAPNVVTYNTLINGF 147
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSLM---SFETNYKEVSKIYDQMQRAGLQPDV 271
K G ++A LF M E TYN L+ + ++ +K+ +M + G +P+
Sbjct: 148 CKLGNMDEAVVLFNQMLENSCSPDVFTYNILIDGYCKQERPQDGAKLLQEMVKYGCEPNF 207
Query: 272 VSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKC 331
++Y L+++ K+ + +A + + ML +P+H +N+++D F G +D A +F+
Sbjct: 208 ITYNTLMDSLVKSGKYIDAFNLAQMMLRRDCKPSHFTFNLMIDMFCKVGQLDLAYELFQL 267
Query: 332 MRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNN 391
M C PDI +Y M+S A+ ++ A + R+ + G P+V+TY +++ G K +
Sbjct: 268 MTDRGCLPDIYTYNIMISGACRANRIDDARQLLERMTEAGCPPDVVTYNSIVSGLCKASQ 327
Query: 392 LEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNI 451
+++ E+Y+ +R G + +T++D K++ D A +EME G PD A I
Sbjct: 328 VDEAYEVYEVLRNGGYFLDVVTCSTLIDGLCKSRRLDDAEKLLREMERNGSAPDVVAYTI 387
Query: 452 LLSLAKTADERNEANELLGNFNHPNNEPGINGLSISVDE 490
L+ AD+ +++ P + SI +D+
Sbjct: 388 LIHGFCKADQLDKSLAFFSEMLDKGCVPTVITYSIVIDK 426
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 83/383 (21%), Positives = 178/383 (46%), Gaps = 7/383 (1%)
Query: 58 LPKDLVLGTLVRLKQLKKWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEK 117
+P + V T+++ V S ++ + +Q + + + +L+ A K + A
Sbjct: 65 VPHNAVYNTIIK-GLCDNGRVDSALVHYRDMQRHCAPSVITYTILVDALCKSARISDASL 123
Query: 118 VLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFV 177
+L M + G AP+VV++ L+ + + G A +F +M + P TY I++ +
Sbjct: 124 ILEDMIEAGCAPNVVTYNTLINGFCKLGNMDEAVVLFNQMLENSCSPDVFTYNILIDGYC 183
Query: 178 EANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQ 237
+ + ++ ++ ++ K +P+ ++ ++ K+G Y A L +M R +
Sbjct: 184 KQERPQDGAKLLQEMV---KYGCEPNFITYNTLMDSLVKSGKYIDAFNLAQMMLRRDCKP 240
Query: 238 STVTYNSLMSFETNYKEVSKIYDQMQRA---GLQPDVVSYALLINAYGKARREEEALAVF 294
S T+N ++ ++ Y+ Q G PD+ +Y ++I+ +A R ++A +
Sbjct: 241 SHFTFNLMIDMFCKVGQLDLAYELFQLMTDRGCLPDIYTYNIMISGACRANRIDDARQLL 300
Query: 295 EEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNA 354
E M +AG P YN ++ + VD+A V++ +R D+ + +T++ +
Sbjct: 301 ERMTEAGCPPDVVTYNSIVSGLCKASQVDEAYEVYEVLRNGGYFLDVVTCSTLIDGLCKS 360
Query: 355 SDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIF 414
++ AEK R ++++G P+V+ Y LI G+ K + L+K + + +M G P +
Sbjct: 361 RRLDDAEKLLREMERNGSAPDVVAYTILIHGFCKADQLDKSLAFFSEMLDKGCVPTVITY 420
Query: 415 TTIMDAYGKNKDFDSAVVWYKEM 437
+ ++D K+ + K M
Sbjct: 421 SIVIDKLCKSARVRDGCMLLKTM 443
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 85/314 (27%), Positives = 142/314 (45%), Gaps = 7/314 (2%)
Query: 171 IILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALM 230
+L FV K +EA ++F L SP D + +I + KA +++A +L M
Sbjct: 3 CLLSAFVRKKKAQEAYDLFKNHLCGLCSP---DSITYSTLINGFCKARDFQQAYRLLDEM 59
Query: 231 AERGVQQSTVTYNSLMSFETNYKEVSKI---YDQMQRAGLQPDVVSYALLINAYGKARRE 287
+RG+ YN+++ + V Y MQR P V++Y +L++A K+ R
Sbjct: 60 EKRGIVPHNAVYNTIIKGLCDNGRVDSALVHYRDMQRH-CAPSVITYTILVDALCKSARI 118
Query: 288 EEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTM 347
+A + E+M++AG P YN L++ F G +D+A +F M + CSPD+ +Y +
Sbjct: 119 SDASLILEDMIEAGCAPNVVTYNTLINGFCKLGNMDEAVVLFNQMLENSCSPDVFTYNIL 178
Query: 348 LSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGI 407
+ Y + K + + + G PN ITY TL+ K + M
Sbjct: 179 IDGYCKQERPQDGAKLLQEMVKYGCEPNFITYNTLMDSLVKSGKYIDAFNLAQMMLRRDC 238
Query: 408 KPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANE 467
KP+ F ++D + K D A ++ M G PD NI++S A A+ ++A +
Sbjct: 239 KPSHFTFNLMIDMFCKVGQLDLAYELFQLMTDRGCLPDIYTYNIMISGACRANRIDDARQ 298
Query: 468 LLGNFNHPNNEPGI 481
LL P +
Sbjct: 299 LLERMTEAGCPPDV 312
Score = 108 bits (270), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 68/242 (28%), Positives = 121/242 (50%), Gaps = 8/242 (3%)
Query: 243 NSLMSFETNYKEVSKIYDQMQR--AGL-QPDVVSYALLINAYGKARREEEALAVFEEMLD 299
N L+S K+ + YD + GL PD ++Y+ LIN + KAR ++A + +EM
Sbjct: 2 NCLLSAFVRKKKAQEAYDLFKNHLCGLCSPDSITYSTLINGFCKARDFQQAYRLLDEMEK 61
Query: 300 AGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEG 359
G+ P + YN ++ +G VD A ++ M+R C+P + +YT ++ A ++ +
Sbjct: 62 RGIVPHNAVYNTIIKGLCDNGRVDSALVHYRDMQR-HCAPSVITYTILVDALCKSARISD 120
Query: 360 AEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMD 419
A + + G PNV+TY TLI G+ K+ N+++ + ++++M N P+ + ++D
Sbjct: 121 ASLILEDMIEAGCAPNVVTYNTLINGFCKLGNMDEAVVLFNQMLENSCSPDVFTYNILID 180
Query: 420 AYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILL-SLAKTA---DERNEANELLGNFNHP 475
Y K + +EM G P+ N L+ SL K+ D N A +L P
Sbjct: 181 GYCKQERPQDGAKLLQEMVKYGCEPNFITYNTLMDSLVKSGKYIDAFNLAQMMLRRDCKP 240
Query: 476 NN 477
++
Sbjct: 241 SH 242
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/235 (22%), Positives = 98/235 (41%), Gaps = 11/235 (4%)
Query: 71 KQLKKWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPS 130
K + +N+ +L S + FN ++I + K G + A ++ M +G P
Sbjct: 222 KYIDAFNLAQMMLRRDCKPSHFTFN-----LMIDMFCKVGQLDLAYELFQLMTDRGCLPD 276
Query: 131 VVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFM 190
+ ++ ++ R R +A + RM +G P +TY I+ +A++ EA EV+
Sbjct: 277 IYTYNIMISGACRANRIDDARQLLERMTEAGCPPDVVTYNSIVSGLCKASQVDEAYEVYE 336
Query: 191 TLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFET 250
L D +I K+ + A KL M G V Y L+
Sbjct: 337 VL---RNGGYFLDVVTCSTLIDGLCKSRRLDDAEKLLREMERNGSAPDVVAYTILIHGFC 393
Query: 251 NYKEVSK---IYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGV 302
++ K + +M G P V++Y+++I+ K+ R + + + ML+ GV
Sbjct: 394 KADQLDKSLAFFSEMLDKGCVPTVITYSIVIDKLCKSARVRDGCMLLKTMLERGV 448
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 79/180 (43%), Gaps = 1/180 (0%)
Query: 310 NILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQ 369
N LL AF +A +FK CSPD +Y+T+++ + A D + A + +++
Sbjct: 2 NCLLSAFVRKKKAQEAYDLFKNHLCGLCSPDSITYSTLINGFCKARDFQQAYRLLDEMEK 61
Query: 370 DGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDS 429
G VP+ Y T+IKG ++ + Y M+ P+ +T ++DA K+
Sbjct: 62 RGIVPHNAVYNTIIKGLCDNGRVDSALVHYRDMQ-RHCAPSVITYTILVDALCKSARISD 120
Query: 430 AVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGINGLSISVD 489
A + ++M G P+ N L++ +EA L + P + +I +D
Sbjct: 121 ASLILEDMIEAGCAPNVVTYNTLINGFCKLGNMDEAVVLFNQMLENSCSPDVFTYNILID 180
>gi|224064580|ref|XP_002301519.1| predicted protein [Populus trichocarpa]
gi|222843245|gb|EEE80792.1| predicted protein [Populus trichocarpa]
Length = 718
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 100/356 (28%), Positives = 177/356 (49%), Gaps = 7/356 (1%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
+I+ G+ G A+ V +GY +V + +A++ AYGR G A IF M+ G
Sbjct: 83 MISTLGRLGKVEMAKTVFKAALTEGYGNTVYAFSAIISAYGRSGYCNEAIKIFYSMKDYG 142
Query: 162 PRPSALTYQIILKLFVEAN-KFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGY 220
+P+ +TY ++ + +FK E+F +L ++ ++PD+ F+ ++ + K G +
Sbjct: 143 LKPNLVTYNAVIDACGKGGVEFKRVLEIFDEML---RNGMQPDRITFNSLLAVCSKGGLW 199
Query: 221 EKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVS---KIYDQMQRAGLQPDVVSYALL 277
E AR L M RG+ Q TYN+L+ ++ +I +M + P+VV+Y+ +
Sbjct: 200 EAARSLSCEMVNRGIDQDIFTYNTLLDAVCKGGQLDMAFEIMSEMPAKNILPNVVTYSTM 259
Query: 278 INAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRC 337
I+ Y KA R ++A +F EM G+ +YN LL +A G ++A V + M
Sbjct: 260 IDGYAKAGRLDDARNLFNEMKFLGISLDRVSYNTLLSIYAKLGRFEEAMDVCREMENSGI 319
Query: 338 SPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMME 397
D+ +Y +L Y + K F +K PN++TY TLI Y+K + M+
Sbjct: 320 RKDVVTYNALLGGYGKQYKYDVVRKVFEEMKARHVSPNLLTYSTLIDVYSKGGLYREAMD 379
Query: 398 IYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILL 453
++ + + G+K + +++ ++DA KN +SAV EM G P+ N ++
Sbjct: 380 VFREFKKAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSII 435
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 90/386 (23%), Positives = 167/386 (43%), Gaps = 54/386 (13%)
Query: 98 DFLMLITAYGKQGDFNKAEKVLSFM-------NKKGYAPSVVSHTALMEAYGRGGRYKNA 150
D++ L+ G +GD KA F N++G S A++ GR G+ + A
Sbjct: 42 DYVFLLRELGNRGDCKKAICCFEFAVKRERKKNEQGKLAS-----AMISTLGRLGKVEMA 96
Query: 151 EAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMM 210
+ +F+ + G + + I
Sbjct: 97 KTVFKAALTEGYGNTVYAFSAI-------------------------------------- 118
Query: 211 IYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSF----ETNYKEVSKIYDQMQRAG 266
I Y ++G +A K+F M + G++ + VTYN+++ +K V +I+D+M R G
Sbjct: 119 ISAYGRSGYCNEAIKIFYSMKDYGLKPNLVTYNAVIDACGKGGVEFKRVLEIFDEMLRNG 178
Query: 267 LQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQAR 326
+QPD +++ L+ K E A ++ EM++ G+ YN LLDA G +D A
Sbjct: 179 MQPDRITFNSLLAVCSKGGLWEAARSLSCEMVNRGIDQDIFTYNTLLDAVCKGGQLDMAF 238
Query: 327 TVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGY 386
+ M P++ +Y+TM+ Y A ++ A F +K G + ++Y TL+ Y
Sbjct: 239 EIMSEMPAKNILPNVVTYSTMIDGYAKAGRLDDARNLFNEMKFLGISLDRVSYNTLLSIY 298
Query: 387 AKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQ 446
AK+ E+ M++ +M +GI+ + + ++ YGK +D ++EM++ P+
Sbjct: 299 AKLGRFEEAMDVCREMENSGIRKDVVTYNALLGGYGKQYKYDVVRKVFEEMKARHVSPNL 358
Query: 447 KAKNILLSLAKTADERNEANELLGNF 472
+ L+ + EA ++ F
Sbjct: 359 LTYSTLIDVYSKGGLYREAMDVFREF 384
Score = 115 bits (289), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 88/377 (23%), Positives = 179/377 (47%), Gaps = 41/377 (10%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
+ + F L+ K G + A + M +G + ++ L++A +GG+ A I
Sbjct: 182 DRITFNSLLAVCSKGGLWEAARSLSCEMVNRGIDQDIFTYNTLLDAVCKGGQLDMAFEIM 241
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVF--MTLLDEEKSPLKPDQKMFHMMIY 212
M + P+ +TY ++ + +A + +A +F M L + D+ ++ ++
Sbjct: 242 SEMPAKNILPNVVTYSTMIDGYAKAGRLDDARNLFNEMKFLG-----ISLDRVSYNTLLS 296
Query: 213 MYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSF---ETNYKEVSKIYDQMQRAGLQP 269
+Y K G +E+A + M G+++ VTYN+L+ + Y V K++++M+ + P
Sbjct: 297 IYAKLGRFEEAMDVCREMENSGIRKDVVTYNALLGGYGKQYKYDVVRKVFEEMKARHVSP 356
Query: 270 DVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVF 329
++++Y+ LI+ Y K EA+ VF E AG++ Y+ L+DA +G+V+ A ++
Sbjct: 357 NLLTYSTLIDVYSKGGLYREAMDVFREFKKAGLKADVVLYSALIDALCKNGLVESAVSLL 416
Query: 330 KCMRRDRCSPDICSYTTMLSAY-----------------------VNASDMEGAEKFFRR 366
M ++ P++ +Y +++ A+ +++S +E A K
Sbjct: 417 DEMTKEGIRPNVVTYNSIIDAFGRPATTESVVDDAGQTSELQIDSLSSSAVEKATKSLVA 476
Query: 367 LKQDGFVPNVITYGTLI---KGYAKVNNLEKMMEI---YDKMRVNGIKPNQTIFTTIMDA 420
++D + + +G L G AK + ++MM I + KM IKPN F+ I++A
Sbjct: 477 DREDNRIIKI--FGQLAAEKAGQAKNSGGQEMMCILGVFHKMHELEIKPNVVTFSAILNA 534
Query: 421 YGKNKDFDSAVVWYKEM 437
+ F+ A + +E+
Sbjct: 535 CSRCNSFEEASMLLEEL 551
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 69/280 (24%), Positives = 123/280 (43%), Gaps = 43/280 (15%)
Query: 94 FNEMDFL----------MLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGR 143
FNEM FL L++ Y K G F +A V M G VV++ AL+ YG+
Sbjct: 276 FNEMKFLGISLDRVSYNTLLSIYAKLGRFEEAMDVCREMENSGIRKDVVTYNALLGGYGK 335
Query: 144 GGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPD 203
+Y +F M++ P+ LTY ++ ++ + ++EA +VF +K+ LK D
Sbjct: 336 QYKYDVVRKVFEEMKARHVSPNLLTYSTLIDVYSKGGLYREAMDVFREF---KKAGLKAD 392
Query: 204 QKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLM-SFETNYKEVSKIYDQM 262
++ +I K G E A L M + G++ + VTYNS++ +F S + D
Sbjct: 393 VVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSIIDAFGRPATTESVVDDAG 452
Query: 263 QRAGLQPDVVSYAL----------------LINAYGKARREEEA-------------LAV 293
Q + LQ D +S + +I +G+ E+ L V
Sbjct: 453 QTSELQIDSLSSSAVEKATKSLVADREDNRIIKIFGQLAAEKAGQAKNSGGQEMMCILGV 512
Query: 294 FEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMR 333
F +M + ++P ++ +L+A + ++A + + +R
Sbjct: 513 FHKMHELEIKPNVVTFSAILNACSRCNSFEEASMLLEELR 552
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 81/171 (47%), Gaps = 1/171 (0%)
Query: 320 GMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITY 379
G V+ A+TVFK + + +++ ++SAY + A K F +K G PN++TY
Sbjct: 91 GKVEMAKTVFKAALTEGYGNTVYAFSAIISAYGRSGYCNEAIKIFYSMKDYGLKPNLVTY 150
Query: 380 GTLIKGYAKVN-NLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEME 438
+I K ++++EI+D+M NG++P++ F +++ K +++A EM
Sbjct: 151 NAVIDACGKGGVEFKRVLEIFDEMLRNGMQPDRITFNSLLAVCSKGGLWEAARSLSCEMV 210
Query: 439 SCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGINGLSISVD 489
+ G D N LL + + A E++ N P + S +D
Sbjct: 211 NRGIDQDIFTYNTLLDAVCKGGQLDMAFEIMSEMPAKNILPNVVTYSTMID 261
>gi|221554580|gb|ACM24117.1| PPR protein [Raphanus sativus]
Length = 688
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 119/483 (24%), Positives = 214/483 (44%), Gaps = 55/483 (11%)
Query: 48 LRSERTRGQPLPKDL----VLGTLVRL----------KQLKKWNVVSEVLEW-LRIQSWW 92
L S+ R +PLP + ++G +VR+ +++++ + ++ + + I+ +
Sbjct: 66 LFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFNILIKCFC 125
Query: 93 DFNEMDFLMLITAYGKQGDFNKAEKVLSF----------------------MNKKGYAPS 130
+++ F + + +GK V++F M + P+
Sbjct: 126 SCSKLPFAL--STFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALDFFHQMFETTCRPN 183
Query: 131 VVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFM 190
VV+ T LM R GR A A+ RM G +P+ +TY I+ + A +
Sbjct: 184 VVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLR 243
Query: 191 TLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLM-SFE 249
+ EE S + P+ ++ +I K G + A+ LF M E+G+ TYNS++ F
Sbjct: 244 KM--EEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFC 301
Query: 250 TN--YKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHK 307
++ + + ++ +M + PDVV+Y LINA+ K + EA +++EML G+ P
Sbjct: 302 SSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTI 361
Query: 308 AYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRL 367
YN ++D F +D A +F M CSPD+ ++TT++ Y A ++ + +
Sbjct: 362 TYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEM 421
Query: 368 KQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDF 427
+ G V N +TY TLI G+ V +L +++ +M +G+ P+ T++D N
Sbjct: 422 PRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKL 481
Query: 428 DSAVVWYKEMESC-----------GFPPDQKAKNILLSLAKTADERNEANELLGNFNHPN 476
A+ +K M+ G PD NIL+ + EA EL H
Sbjct: 482 KDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRG 541
Query: 477 NEP 479
P
Sbjct: 542 IVP 544
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 104/391 (26%), Positives = 191/391 (48%), Gaps = 23/391 (5%)
Query: 77 NVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTA 136
N+ +E+ E + +N M I + G ++ AE++L M ++ +P VV++ A
Sbjct: 276 NLFTEMQEKGIFPDLFTYNSM-----IVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNA 330
Query: 137 LMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEE 196
L+ A+ + G++ A ++ M G P+ +TY ++ F + ++ AE++F + +
Sbjct: 331 LINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKG 390
Query: 197 KSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVS 256
SP D F +I Y A + +L M RG+ +TVTYN+L+ +++
Sbjct: 391 CSP---DVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLN 447
Query: 257 KIYD---QMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEM------LDA-----GV 302
D QM +G+ PD+V+ L++ + ++AL +F+ M LDA GV
Sbjct: 448 AALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASHPFNGV 507
Query: 303 RPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEK 362
P YNIL+ G +A +++ M PD +Y++M+ S ++ A +
Sbjct: 508 EPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQ 567
Query: 363 FFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYG 422
F + F PNV+T+ TLI GY K ++ +E++ +M GI + I+ T++ +
Sbjct: 568 MFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLELFCEMGRRGIVADAIIYITLIYGFR 627
Query: 423 KNKDFDSAVVWYKEMESCGFPPDQ-KAKNIL 452
K + + A+ ++EM S G PD +N+L
Sbjct: 628 KVGNINGALDIFQEMISSGVYPDTITIRNML 658
Score = 145 bits (366), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 109/436 (25%), Positives = 196/436 (44%), Gaps = 26/436 (5%)
Query: 30 NWRRLMNQIEEVGSAV-AVLRSERTRGQPL-PKDLVLGTLVRLKQLKKWNVVS--EVLEW 85
+ LMN + G V AV +R L P + GT+V KK + VS +L
Sbjct: 186 TFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVD-GMCKKGDTVSALNLLRK 244
Query: 86 LRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGG 145
+ S N + + +I + K G + A+ + + M +KG P + ++ +++ + G
Sbjct: 245 MEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSG 304
Query: 146 RYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSP--LKPD 203
R+ +AE + + M P +TY ++ FV+ KF EA E++ +E P + P+
Sbjct: 305 RWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAAELY-----DEMLPRGIIPN 359
Query: 204 QKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVS---KIYD 260
++ MI + K + A +F LMA +G T+ +L+ K + ++
Sbjct: 360 TITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLH 419
Query: 261 QMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISG 320
+M R GL + V+Y LI+ + AL + ++M+ +GV P N LLD +G
Sbjct: 420 EMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNG 479
Query: 321 MVDQARTVFKCMRRDR-----------CSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQ 369
+ A +FK M++ + PD+ +Y ++ +N AE+ + +
Sbjct: 480 KLKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPH 539
Query: 370 DGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDS 429
G VP+ ITY ++I G K + L++ +++ M PN F T+++ Y K D
Sbjct: 540 RGIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDD 599
Query: 430 AVVWYKEMESCGFPPD 445
+ + EM G D
Sbjct: 600 GLELFCEMGRRGIVAD 615
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 94/383 (24%), Positives = 183/383 (47%), Gaps = 18/383 (4%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYA-PSVVSHTALMEAYGRGGRYKNAEAIFRRMQSS 160
++ K+GD A +L M + + P+VV ++A++++ + GR+ +A+ +F MQ
Sbjct: 225 IVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEK 284
Query: 161 GPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGY 220
G P TY ++ F + ++ +AE++ +L+ + SP D ++ +I + K G +
Sbjct: 285 GIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISP---DVVTYNALINAFVKEGKF 341
Query: 221 EKARKLFALMAERGVQQSTVTYNSLM---SFETNYKEVSKIYDQMQRAGLQPDVVSYALL 277
+A +L+ M RG+ +T+TYNS++ + ++ M G PDV ++ L
Sbjct: 342 FEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTL 401
Query: 278 INAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRC 337
I+ Y A+R ++ + + EM G+ YN L+ F + G ++ A + + M
Sbjct: 402 IDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGV 461
Query: 338 SPDICSYTTMLSAYVNASDMEGAEKFFRRLKQ-----------DGFVPNVITYGTLIKGY 386
PDI + T+L + ++ A + F+ +++ +G P+V+TY LI G
Sbjct: 462 CPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILICGL 521
Query: 387 AKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQ 446
+ E+Y++M GI P+ +++++D K D A + M S F P+
Sbjct: 522 INEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNV 581
Query: 447 KAKNILLSLAKTADERNEANELL 469
N L++ A ++ EL
Sbjct: 582 VTFNTLINGYCKAGRVDDGLELF 604
Score = 102 bits (255), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 71/325 (21%), Positives = 140/325 (43%), Gaps = 17/325 (5%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + + +I + KQ + AE + M KG +P V + T L++ Y R + +
Sbjct: 359 NTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELL 418
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
M G + +TY ++ F A ++ ++ S + PD + ++
Sbjct: 419 HEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMI---SSGVCPDIVTCNTLLDGL 475
Query: 215 KKAGGYEKARKLFALMAER-----------GVQQSTVTYNSLMSFETN---YKEVSKIYD 260
G + A ++F M + GV+ +TYN L+ N + E ++Y+
Sbjct: 476 CDNGKLKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYE 535
Query: 261 QMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISG 320
+M G+ PD ++Y+ +I+ K R +EA +F M P +N L++ + +G
Sbjct: 536 EMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAG 595
Query: 321 MVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYG 380
VD +F M R D Y T++ + ++ GA F+ + G P+ IT
Sbjct: 596 RVDDGLELFCEMGRRGIVADAIIYITLIYGFRKVGNINGALDIFQEMISSGVYPDTITIR 655
Query: 381 TLIKGYAKVNNLEKMMEIYDKMRVN 405
++ G+ LE+ + + + ++++
Sbjct: 656 NMLTGFWSKEELERAVAMLEDLQMS 680
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/260 (25%), Positives = 117/260 (45%), Gaps = 4/260 (1%)
Query: 214 YKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKE---VSKIYDQMQRAGLQPD 270
+ + G E A LF+ M S V + LM + V +Y +M+R ++ D
Sbjct: 54 FHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCD 113
Query: 271 VVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFK 330
+ S+ +LI + + AL+ F ++ G+ P + LL + V +A F
Sbjct: 114 IYSFNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALDFFH 173
Query: 331 CMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVN 390
M C P++ ++TT+++ + A R+ +DG P ITYGT++ G K
Sbjct: 174 QMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKG 233
Query: 391 NLEKMMEIYDKM-RVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAK 449
+ + + KM V+ I PN I++ I+D+ K+ A + EM+ G PD
Sbjct: 234 DTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTY 293
Query: 450 NILLSLAKTADERNEANELL 469
N ++ ++ ++A +LL
Sbjct: 294 NSMIVGFCSSGRWSDAEQLL 313
>gi|357164338|ref|XP_003580022.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
mitochondrial-like [Brachypodium distachyon]
Length = 966
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 102/401 (25%), Positives = 188/401 (46%), Gaps = 28/401 (6%)
Query: 110 GDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTY 169
G F KA ++L M +KG+ P ++T ++ + + + + +F+ M+ +G P TY
Sbjct: 431 GKFEKAFQILKEMMRKGFVPDTSTYTKVITFLCQAKKVEKSFLLFQEMKRAGVNPDVYTY 490
Query: 170 QIILKLFVEANKFKEAEEVFMTLLDEEKSP-LKPDQKMFHMMIYMYKKAGGYEKARKLFA 228
I++ F +A ++A F DE +S P+ + +++ Y K+ +A +F
Sbjct: 491 TILIDSFCKAGLIEQARSWF----DEMRSVGCSPNVVTYTALLHAYLKSKQLIQAHDIFH 546
Query: 229 LMAERGVQQSTVTYNSLMSFETNYKEVSK---IYDQM----------------QRAGLQP 269
M + + VTY++L+ E+ K +Y+++ + P
Sbjct: 547 RMVDAACYPNAVTYSALIDGLCKAGEIQKACEVYEKLIGTSGNVESDFYFEGNDTCTIAP 606
Query: 270 DVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVF 329
+VV+Y LI+ KA++ +A + + ML AG P Y+ L+D F G +D A+ VF
Sbjct: 607 NVVTYGALIDGLCKAQKVSDAHELLDAMLAAGCEPNQIVYDALIDGFCKIGKIDNAQEVF 666
Query: 330 KCMRRDRCS--PDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYA 387
+R +C P + +YT+++ ++ A K + D PNV+TY +I G +
Sbjct: 667 --LRMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSEMLNDSCNPNVVTYTAMIDGLS 724
Query: 388 KVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQK 447
KV +EK + + M G PN +T ++D GK D+++ +K+M S G P+
Sbjct: 725 KVGEIEKALNLLSLMEEKGCSPNVVTYTALIDGLGKTGKADASLKLFKQMNSKGCAPNYV 784
Query: 448 AKNILLSLAKTADERNEANELLGNFNHPNNEPGINGLSISV 488
+L++ A +EA+ LL H + + G +V
Sbjct: 785 TYRVLINHCCAAGLLDEAHLLLDEMKHTHWPKHLQGYHCAV 825
Score = 155 bits (392), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 114/469 (24%), Positives = 199/469 (42%), Gaps = 48/469 (10%)
Query: 4 LAPRKFMQKRRKVEVFKDAADEAGKKNWRRLMNQIEEVGSAVAVLRSERTRGQPLPKDLV 63
++ F R + F A + G+ W +N +E+ + D V
Sbjct: 230 MSASGFCMDRSTIGYFAQALCKVGR--WADALNMLEK---------------EDFNLDTV 272
Query: 64 LGT--LVRLKQLKKWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSF 121
L T + L + +N L +R S N + + L++ + K+ F +++++
Sbjct: 273 LCTQMISGLMEASLFNEAMSFLHRMRCNSCIP-NVVTYRTLLSGFLKKKQFGWCKRIINM 331
Query: 122 MNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANK 181
M +G P+ +L+ Y G Y A +F RM + G P + Y I + +
Sbjct: 332 MMTEGCNPNPSLFNSLVHGYCNAGDYAYAYKLFNRMTTCGSPPGYVAYNIFIGSICGQEE 391
Query: 182 FKEA------EEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGV 235
A E+V+ +L K + F + G +EKA ++ M +G
Sbjct: 392 LPNAELLDLVEKVYEEMLAASCVLNKVNTANFSRCLC---GVGKFEKAFQILKEMMRKGF 448
Query: 236 QQSTVTYNSLMSFETNYKEVSK---IYDQMQRAGLQPDVVSYALLINAYGKARREEEALA 292
T TY +++F K+V K ++ +M+RAG+ PDV +Y +LI+++ KA E+A +
Sbjct: 449 VPDTSTYTKVITFLCQAKKVEKSFLLFQEMKRAGVNPDVYTYTILIDSFCKAGLIEQARS 508
Query: 293 VFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYV 352
F+EM G P Y LL A+ S + QA +F M C P+ +Y+ ++
Sbjct: 509 WFDEMRSVGCSPNVVTYTALLHAYLKSKQLIQAHDIFHRMVDAACYPNAVTYSALIDGLC 568
Query: 353 NASDMEGAEKFFRRLKQDG----------------FVPNVITYGTLIKGYAKVNNLEKMM 396
A +++ A + + +L PNV+TYG LI G K +
Sbjct: 569 KAGEIQKACEVYEKLIGTSGNVESDFYFEGNDTCTIAPNVVTYGALIDGLCKAQKVSDAH 628
Query: 397 EIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPD 445
E+ D M G +PNQ ++ ++D + K D+A + M CG+ P
Sbjct: 629 ELLDAMLAAGCEPNQIVYDALIDGFCKIGKIDNAQEVFLRMTKCGYLPS 677
Score = 142 bits (357), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 95/395 (24%), Positives = 165/395 (41%), Gaps = 63/395 (15%)
Query: 119 LSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVE 178
L+ + K+ + V T ++ + A + RM+ + P+ +TY+ +L F++
Sbjct: 259 LNMLEKEDFNLDTVLCTQMISGLMEASLFNEAMSFLHRMRCNSCIPNVVTYRTLLSGFLK 318
Query: 179 ANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQS 238
+F + + ++ E P+ +F+ +++ Y AG Y A KLF M G
Sbjct: 319 KKQFGWCKRIINMMMTE---GCNPNPSLFNSLVHGYCNAGDYAYAYKLFNRMTTCGSPPG 375
Query: 239 TVTYNSLMSFETNYKE---------VSKIYDQM--------------------------- 262
V YN + +E V K+Y++M
Sbjct: 376 YVAYNIFIGSICGQEELPNAELLDLVEKVYEEMLAASCVLNKVNTANFSRCLCGVGKFEK 435
Query: 263 --------QRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLD 314
R G PD +Y +I +A++ E++ +F+EM AGV P Y IL+D
Sbjct: 436 AFQILKEMMRKGFVPDTSTYTKVITFLCQAKKVEKSFLLFQEMKRAGVNPDVYTYTILID 495
Query: 315 AFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVP 374
+F +G+++QAR+ F MR CSP++ +YT +L AY+ + + A F R+ P
Sbjct: 496 SFCKAGLIEQARSWFDEMRSVGCSPNVVTYTALLHAYLKSKQLIQAHDIFHRMVDAACYP 555
Query: 375 NVITYGTLIKGYAKVNNLEKMMEIYDKM----------------RVNGIKPNQTIFTTIM 418
N +TY LI G K ++K E+Y+K+ I PN + ++
Sbjct: 556 NAVTYSALIDGLCKAGEIQKACEVYEKLIGTSGNVESDFYFEGNDTCTIAPNVVTYGALI 615
Query: 419 DAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILL 453
D K + A M + G P+Q + L+
Sbjct: 616 DGLCKAQKVSDAHELLDAMLAAGCEPNQIVYDALI 650
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 87/348 (25%), Positives = 154/348 (44%), Gaps = 25/348 (7%)
Query: 99 FLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQ 158
+ +LI ++ K G +A M G +P+VV++TAL+ AY + + A IF RM
Sbjct: 490 YTILIDSFCKAGLIEQARSWFDEMRSVGCSPNVVTYTALLHAYLKSKQLIQAHDIFHRMV 549
Query: 159 SSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAG 218
+ P+A+TY ++ +A + ++A EV+ L+
Sbjct: 550 DAACYPNAVTYSALIDGLCKAGEIQKACEVYEKLIG----------------------TS 587
Query: 219 GYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVS---KIYDQMQRAGLQPDVVSYA 275
G ++ F + + VTY +L+ ++VS ++ D M AG +P+ + Y
Sbjct: 588 GNVESDFYFEGNDTCTIAPNVVTYGALIDGLCKAQKVSDAHELLDAMLAAGCEPNQIVYD 647
Query: 276 LLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRD 335
LI+ + K + + A VF M G P+ Y L+D G +D A V M D
Sbjct: 648 ALIDGFCKIGKIDNAQEVFLRMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSEMLND 707
Query: 336 RCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKM 395
C+P++ +YT M+ ++E A +++ G PNV+TY LI G K +
Sbjct: 708 SCNPNVVTYTAMIDGLSKVGEIEKALNLLSLMEEKGCSPNVVTYTALIDGLGKTGKADAS 767
Query: 396 MEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFP 443
++++ +M G PN + +++ D A + EM+ +P
Sbjct: 768 LKLFKQMNSKGCAPNYVTYRVLINHCCAAGLLDEAHLLLDEMKHTHWP 815
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 86/343 (25%), Positives = 154/343 (44%), Gaps = 42/343 (12%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + + LI K + A ++L M G P+ + + AL++ + + G+ NA+ +F
Sbjct: 607 NVVTYGALIDGLCKAQKVSDAHELLDAMLAAGCEPNQIVYDALIDGFCKIGKIDNAQEVF 666
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
RM G PS TY ++ + + A +V +L++ P+ + MI
Sbjct: 667 LRMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSEMLNDS---CNPNVVTYTAMIDGL 723
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSLMSF--ETNYKEVS-KIYDQMQRAGLQPDV 271
K G EKA L +LM E+G + VTY +L+ +T + S K++ QM G P+
Sbjct: 724 SKVGEIEKALNLLSLMEEKGCSPNVVTYTALIDGLGKTGKADASLKLFKQMNSKGCAPNY 783
Query: 272 VSYALLINAYGKARREEEA---------------------------------LAVFEEML 298
V+Y +LIN A +EA L + EEM
Sbjct: 784 VTYRVLINHCCAAGLLDEAHLLLDEMKHTHWPKHLQGYHCAVQGFSKKFIASLGLLEEME 843
Query: 299 DAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICS---YTTMLSAYVNAS 355
P Y +L+D+F+ +G ++ A + K + S ++ S Y +++ A AS
Sbjct: 844 SHETVPIAPVYGMLIDSFSKAGRLETALELHKELVEVSSSLNMTSTGMYASLIQALCLAS 903
Query: 356 DMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEI 398
+E A + + + G VP++I + +L+KG +VN ++ +++
Sbjct: 904 QVEEAFTLYTEMTRKGIVPDLIVFVSLVKGLIEVNKWDEALQL 946
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 79/364 (21%), Positives = 148/364 (40%), Gaps = 19/364 (5%)
Query: 101 MLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSS 160
+L+ + G +++A + L + GY PS V++ AL++ G+ + + + M +S
Sbjct: 174 VLVRRCCRHGLWDEALEELGRLKDFGYRPSAVTYNALVQVLASAGQVEMGFRVQKEMSAS 233
Query: 161 GPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGY 220
G T + + ++ +A + EK D + MI +A +
Sbjct: 234 GFCMDRSTIGYFAQALCKVGRWADALNML------EKEDFNLDTVLCTQMISGLMEASLF 287
Query: 221 EKARKLFALMAERGVQQSTVTYNSLMSFETNYKE---VSKIYDQMQRAGLQPDVVSYALL 277
+A M + VTY +L+S K+ +I + M G P+ + L
Sbjct: 288 NEAMSFLHRMRCNSCIPNVVTYRTLLSGFLKKKQFGWCKRIINMMMTEGCNPNPSLFNSL 347
Query: 278 INAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISG--------MVDQARTVF 329
++ Y A A +F M G P + AYNI + +I G ++D V+
Sbjct: 348 VHGYCNAGDYAYAYKLFNRMTTCGSPPGYVAYNIFIG--SICGQEELPNAELLDLVEKVY 405
Query: 330 KCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKV 389
+ M C + + E A + + + + GFVP+ TY +I +
Sbjct: 406 EEMLAASCVLNKVNTANFSRCLCGVGKFEKAFQILKEMMRKGFVPDTSTYTKVITFLCQA 465
Query: 390 NNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAK 449
+EK ++ +M+ G+ P+ +T ++D++ K + A W+ EM S G P+
Sbjct: 466 KKVEKSFLLFQEMKRAGVNPDVYTYTILIDSFCKAGLIEQARSWFDEMRSVGCSPNVVTY 525
Query: 450 NILL 453
LL
Sbjct: 526 TALL 529
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 43/237 (18%), Positives = 105/237 (44%), Gaps = 20/237 (8%)
Query: 204 QKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVS---KIYD 260
+++ ++++ + G +++A + + + G + S VTYN+L+ + +V ++
Sbjct: 169 RRLLNVLVRRCCRHGLWDEALEELGRLKDFGYRPSAVTYNALVQVLASAGQVEMGFRVQK 228
Query: 261 QMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNI--LLDAFAI 318
+M +G D + A K R +AL + E+ + +N+ +L I
Sbjct: 229 EMSASGFCMDRSTIGYFAQALCKVGRWADALNMLEK----------EDFNLDTVLCTQMI 278
Query: 319 SGMVD-----QARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFV 373
SG+++ +A + MR + C P++ +Y T+LS ++ ++ + +G
Sbjct: 279 SGLMEASLFNEAMSFLHRMRCNSCIPNVVTYRTLLSGFLKKKQFGWCKRIINMMMTEGCN 338
Query: 374 PNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSA 430
PN + +L+ GY + +++++M G P + + + ++ +A
Sbjct: 339 PNPSLFNSLVHGYCNAGDYAYAYKLFNRMTTCGSPPGYVAYNIFIGSICGQEELPNA 395
Score = 45.1 bits (105), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 42/202 (20%), Positives = 77/202 (38%), Gaps = 5/202 (2%)
Query: 288 EEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTM 347
+EAL + D G RP+ YN L+ A +G V+ V +++ + C +
Sbjct: 186 DEALEELGRLKDFGYRPSAVTYNALVQVLASAGQVEMGFRV----QKEMSASGFCMDRST 241
Query: 348 LSAYVNASDMEGA-EKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNG 406
+ + A G L+++ F + + +I G + + + M +MR N
Sbjct: 242 IGYFAQALCKVGRWADALNMLEKEDFNLDTVLCTQMISGLMEASLFNEAMSFLHRMRCNS 301
Query: 407 IKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEAN 466
PN + T++ + K K F M + G P+ N L+ A + A
Sbjct: 302 CIPNVVTYRTLLSGFLKKKQFGWCKRIINMMMTEGCNPNPSLFNSLVHGYCNAGDYAYAY 361
Query: 467 ELLGNFNHPNNEPGINGLSISV 488
+L + PG +I +
Sbjct: 362 KLFNRMTTCGSPPGYVAYNIFI 383
>gi|46091165|dbj|BAD13711.1| PPR protein [Oryza sativa Indica Group]
Length = 794
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 100/366 (27%), Positives = 181/366 (49%), Gaps = 14/366 (3%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + + +I A K +KA +VL+ M K G P+ ++ +++ Y G+ K A
Sbjct: 233 NVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFL 292
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
++M S G P +TY ++ + + EA ++F ++ K LKP+ + ++ Y
Sbjct: 293 KKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSM---TKRGLKPEITTYGTLLQGY 349
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSK---IYDQMQRAGLQPDV 271
G + L LM G+ + ++ L+ +V + ++ +M++ GL PD
Sbjct: 350 ATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDT 409
Query: 272 VSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKC 331
V+Y +I K+ R E+A+ FE+M+D + P + YN L+ + I D+A+ +
Sbjct: 410 VTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILE 469
Query: 332 MRRDRCSPDICSYTTMLSAYVNASDMEG----AEKFFRRLKQDGFVPNVITYGTLIKGYA 387
M DR IC T ++ +++ EG +EK F + + G P++ITY TLI GY
Sbjct: 470 ML-DR---GICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYC 525
Query: 388 KVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQK 447
+++ ++ M G+KP+ + T+++ Y K + A+V ++EMES G PD
Sbjct: 526 LAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDII 585
Query: 448 AKNILL 453
NI+L
Sbjct: 586 TYNIIL 591
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 92/354 (25%), Positives = 167/354 (47%), Gaps = 6/354 (1%)
Query: 129 PSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEV 188
P VVS+T ++ + + G A + M G P+ +TY I+ +A +A EV
Sbjct: 197 PDVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEV 256
Query: 189 FMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSF 248
+++ K+ + P+ + ++ +++ Y +G ++A M GV+ VTYNSLM +
Sbjct: 257 LTSMV---KNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDY 313
Query: 249 ETN---YKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPT 305
E K++D M + GL+P++ +Y L+ Y E + + M+ G+ P
Sbjct: 314 LCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPN 373
Query: 306 HKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFR 365
H ++IL+ A+A G VDQA VF MR+ +PD +Y T++ + +E A ++F
Sbjct: 374 HYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFE 433
Query: 366 RLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNK 425
++ + P I Y +LI + +K E+ +M GI + F +I+D++ K
Sbjct: 434 QMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEG 493
Query: 426 DFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEP 479
+ + M G PD + L+ A + +EA +LL + +P
Sbjct: 494 RVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKP 547
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 89/379 (23%), Positives = 179/379 (47%), Gaps = 5/379 (1%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNA-EAI 153
N + +L+ + G + L + KKG+ ++ T +++ R +A + +
Sbjct: 90 NLCTYGILMGSCCCAGRLDLGFAALGNVIKKGFIVDAIAFTPMLKGLCADKRTSDAMDIV 149
Query: 154 FRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYM 213
RRM G P+ +Y I+LK + N+ +EA E+ + ++ ++ PD + +I
Sbjct: 150 LRRMTQLGCIPNVFSYNILLKGLCDDNRSQEALEL-LQMMPDDGGDCPPDVVSYTTVING 208
Query: 214 YKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSK---IYDQMQRAGLQPD 270
+ K G +KA + M +RG+ + VTY+S+++ + + K + M + G+ P+
Sbjct: 209 FFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPN 268
Query: 271 VVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFK 330
+Y +++ Y + + +EA+ ++M GV P YN L+D +G +AR +F
Sbjct: 269 CRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFD 328
Query: 331 CMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVN 390
M + P+I +Y T+L Y + + ++G PN + LI YAK
Sbjct: 329 SMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQG 388
Query: 391 NLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKN 450
+++ M ++ KMR G+ P+ + T++ K+ + A+ ++++M P N
Sbjct: 389 KVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYN 448
Query: 451 ILLSLAKTADERNEANELL 469
L+ D+ ++A EL+
Sbjct: 449 SLIHSLCIFDKWDKAKELI 467
Score = 132 bits (331), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 87/393 (22%), Positives = 173/393 (44%), Gaps = 12/393 (3%)
Query: 97 MDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRR 156
MD+L K G +A K+ M K+G P + ++ L++ Y G +
Sbjct: 311 MDYLC------KNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDL 364
Query: 157 MQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKK 216
M +G P+ + I++ + + K +A VF + + L PD + +I + K
Sbjct: 365 MVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKM---RQQGLNPDTVTYGTVIGILCK 421
Query: 217 AGGYEKARKLFALMAERGVQQSTVTYNSL---MSFETNYKEVSKIYDQMQRAGLQPDVVS 273
+G E A + F M + + + YNSL + + + ++ +M G+ D +
Sbjct: 422 SGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIF 481
Query: 274 YALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMR 333
+ +I+++ K R E+ +F+ M+ GV+P Y+ L+D + ++G +D+A + M
Sbjct: 482 FNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMV 541
Query: 334 RDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLE 393
PD +Y T+++ Y S ME A FR ++ G P++ITY +++G +
Sbjct: 542 SVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTA 601
Query: 394 KMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILL 453
E+Y + +G + + + I+ KN D A+ ++ + + + NI++
Sbjct: 602 AAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMI 661
Query: 454 SLAKTADERNEANELLGNFNHPNNEPGINGLSI 486
+EA +L + P + S+
Sbjct: 662 GALLKVGRNDEAKDLFAALSANGLVPDVRTYSL 694
Score = 116 bits (290), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 96/435 (22%), Positives = 191/435 (43%), Gaps = 41/435 (9%)
Query: 59 PKDLVLGTLVRLKQLKKWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKV 118
P+ GTL++ K V L L +++ N F +LI AY KQG ++A V
Sbjct: 337 PEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLV 396
Query: 119 LSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVE 178
S M ++G P V++ ++ + GR ++A F +M P + Y ++
Sbjct: 397 FSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCI 456
Query: 179 ANKFKEAEEVFMTLLDEE--------------------------------KSPLKPDQKM 206
+K+ +A+E+ + +LD + +KPD
Sbjct: 457 FDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIIT 516
Query: 207 FHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSKIYD------ 260
+ +I Y AG ++A KL A M G++ VTYN+L++ Y ++S++ D
Sbjct: 517 YSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLIN---GYCKISRMEDALVLFR 573
Query: 261 QMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISG 320
+M+ +G+ PD+++Y +++ + RR A ++ + ++G + YNI+L +
Sbjct: 574 EMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNN 633
Query: 321 MVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYG 380
+ D+A +F+ + + ++ M+ A + + A+ F L +G VP+V TY
Sbjct: 634 LTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYS 693
Query: 381 TLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESC 440
+ + + LE++ +++ M NG N + +I+ + D A + ++
Sbjct: 694 LMAENLIEQGLLEELDDLFLSMEENGCTANSRMLNSIVRKLLQRGDITRAGTYLFMIDEK 753
Query: 441 GFPPDQKAKNILLSL 455
F + ++ L L
Sbjct: 754 HFSLEASTASLFLDL 768
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 71/305 (23%), Positives = 121/305 (39%), Gaps = 43/305 (14%)
Query: 221 EKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSKI--YDQMQRAG---LQPDVVSYA 275
E AR +F + RG S N ++ + + + Y++M RAG + P++ +Y
Sbjct: 36 EDARHVFDELLRRGRGASIYGLNCALADVARHSPAAAVSRYNRMARAGADEVTPNLCTYG 95
Query: 276 LLINAYGKARREEEALA------------------------------------VFEEMLD 299
+L+ + A R + A V M
Sbjct: 96 ILMGSCCCAGRLDLGFAALGNVIKKGFIVDAIAFTPMLKGLCADKRTSDAMDIVLRRMTQ 155
Query: 300 AGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDR--CSPDICSYTTMLSAYVNASDM 357
G P +YNILL +A + + M D C PD+ SYTT+++ + D+
Sbjct: 156 LGCIPNVFSYNILLKGLCDDNRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDL 215
Query: 358 EGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTI 417
+ A + + G +PNV+TY ++I K ++K ME+ M NG+ PN + +I
Sbjct: 216 DKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSI 275
Query: 418 MDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNN 477
+ Y + A+ + K+M S G PD N L+ EA ++ +
Sbjct: 276 VHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGL 335
Query: 478 EPGIN 482
+P I
Sbjct: 336 KPEIT 340
>gi|115482730|ref|NP_001064958.1| Os10g0497300 [Oryza sativa Japonica Group]
gi|41152691|dbj|BAD08215.1| hypothetical protein [Oryza sativa Japonica Group]
gi|113639567|dbj|BAF26872.1| Os10g0497300 [Oryza sativa Japonica Group]
gi|215693996|dbj|BAG89195.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 794
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 100/366 (27%), Positives = 181/366 (49%), Gaps = 14/366 (3%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + + +I A K +KA +VL+ M K G P+ ++ +++ Y G+ K A
Sbjct: 233 NVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFL 292
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
++M S G P +TY ++ + + EA ++F ++ K LKP+ + ++ Y
Sbjct: 293 KKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSM---TKRGLKPEITTYGTLLQGY 349
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSK---IYDQMQRAGLQPDV 271
G + L LM G+ + ++ L+ +V + ++ +M++ GL PD
Sbjct: 350 ATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDT 409
Query: 272 VSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKC 331
V+Y +I K+ R E+A+ FE+M+D + P + YN L+ + I D+A+ +
Sbjct: 410 VTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILE 469
Query: 332 MRRDRCSPDICSYTTMLSAYVNASDMEG----AEKFFRRLKQDGFVPNVITYGTLIKGYA 387
M DR IC T ++ +++ EG +EK F + + G P++ITY TLI GY
Sbjct: 470 ML-DR---GICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYC 525
Query: 388 KVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQK 447
+++ ++ M G+KP+ + T+++ Y K + A+V ++EMES G PD
Sbjct: 526 LAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDII 585
Query: 448 AKNILL 453
NI+L
Sbjct: 586 TYNIIL 591
Score = 146 bits (369), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 92/354 (25%), Positives = 167/354 (47%), Gaps = 6/354 (1%)
Query: 129 PSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEV 188
P VVS+T ++ + + G A + M G P+ +TY I+ +A +A EV
Sbjct: 197 PDVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEV 256
Query: 189 FMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSF 248
+++ K+ + P+ + ++ +++ Y +G ++A M GV+ VTYNSLM +
Sbjct: 257 LTSMV---KNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDY 313
Query: 249 ETN---YKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPT 305
E K++D M + GL+P++ +Y L+ Y E + + M+ G+ P
Sbjct: 314 LCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPN 373
Query: 306 HKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFR 365
H ++IL+ A+A G VDQA VF MR+ +PD +Y T++ + +E A ++F
Sbjct: 374 HYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFE 433
Query: 366 RLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNK 425
++ + P I Y +LI + +K E+ +M GI + F +I+D++ K
Sbjct: 434 QMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEG 493
Query: 426 DFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEP 479
+ + M G PD + L+ A + +EA +LL + +P
Sbjct: 494 RVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKP 547
Score = 139 bits (349), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 92/352 (26%), Positives = 158/352 (44%), Gaps = 34/352 (9%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNA-EAI 153
N + +LI + G + L + KKG+ ++ T L++ R +A + +
Sbjct: 90 NLCTYGILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIV 149
Query: 154 FRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYM 213
RRM G P+ +Y I+LK + N+ +EA E+ + ++ ++ PD + +I
Sbjct: 150 LRRMTQLGCIPNVFSYNILLKGLCDENRSQEALEL-LQMMPDDGGDCPPDVVSYTTVING 208
Query: 214 YKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSKIYDQMQRAGLQPDVVS 273
+ K G +KA + M +RG+ P+VV+
Sbjct: 209 FFKEGDLDKAYGTYHEMLDRGIL--------------------------------PNVVT 236
Query: 274 YALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMR 333
Y+ +I A KA+ ++A+ V M+ GV P + YN ++ + SG +A K M
Sbjct: 237 YSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMH 296
Query: 334 RDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLE 393
D PD+ +Y +++ A K F + + G P + TYGTL++GYA L
Sbjct: 297 SDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALV 356
Query: 394 KMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPD 445
+M + D M NGI PN +F+ ++ AY K D A++ + +M G PD
Sbjct: 357 EMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPD 408
Score = 132 bits (331), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 87/393 (22%), Positives = 173/393 (44%), Gaps = 12/393 (3%)
Query: 97 MDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRR 156
MD+L K G +A K+ M K+G P + ++ L++ Y G +
Sbjct: 311 MDYLC------KNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDL 364
Query: 157 MQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKK 216
M +G P+ + I++ + + K +A VF + + L PD + +I + K
Sbjct: 365 MVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKM---RQQGLNPDTVTYGTVIGILCK 421
Query: 217 AGGYEKARKLFALMAERGVQQSTVTYNSL---MSFETNYKEVSKIYDQMQRAGLQPDVVS 273
+G E A + F M + + + YNSL + + + ++ +M G+ D +
Sbjct: 422 SGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIF 481
Query: 274 YALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMR 333
+ +I+++ K R E+ +F+ M+ GV+P Y+ L+D + ++G +D+A + M
Sbjct: 482 FNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMV 541
Query: 334 RDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLE 393
PD +Y T+++ Y S ME A FR ++ G P++ITY +++G +
Sbjct: 542 SVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTA 601
Query: 394 KMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILL 453
E+Y + +G + + + I+ KN D A+ ++ + + + NI++
Sbjct: 602 AAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMI 661
Query: 454 SLAKTADERNEANELLGNFNHPNNEPGINGLSI 486
+EA +L + P + S+
Sbjct: 662 GALLKVGRNDEAKDLFAALSANGLVPDVRTYSL 694
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 96/435 (22%), Positives = 191/435 (43%), Gaps = 41/435 (9%)
Query: 59 PKDLVLGTLVRLKQLKKWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKV 118
P+ GTL++ K V L L +++ N F +LI AY KQG ++A V
Sbjct: 337 PEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLV 396
Query: 119 LSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVE 178
S M ++G P V++ ++ + GR ++A F +M P + Y ++
Sbjct: 397 FSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCI 456
Query: 179 ANKFKEAEEVFMTLLDEE--------------------------------KSPLKPDQKM 206
+K+ +A+E+ + +LD + +KPD
Sbjct: 457 FDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIIT 516
Query: 207 FHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSKIYD------ 260
+ +I Y AG ++A KL A M G++ VTYN+L++ Y ++S++ D
Sbjct: 517 YSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLIN---GYCKISRMEDALVLFR 573
Query: 261 QMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISG 320
+M+ +G+ PD+++Y +++ + RR A ++ + ++G + YNI+L +
Sbjct: 574 EMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNN 633
Query: 321 MVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYG 380
+ D+A +F+ + + ++ M+ A + + A+ F L +G VP+V TY
Sbjct: 634 LTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYS 693
Query: 381 TLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESC 440
+ + + LE++ +++ M NG N + +I+ + D A + ++
Sbjct: 694 LMAENLIEQGLLEELDDLFLSMEENGCTANSRMLNSIVRKLLQRGDITRAGTYLFMIDEK 753
Query: 441 GFPPDQKAKNILLSL 455
F + ++ L L
Sbjct: 754 HFSLEASTASLFLDL 768
Score = 95.1 bits (235), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 72/305 (23%), Positives = 121/305 (39%), Gaps = 43/305 (14%)
Query: 221 EKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSKI--YDQMQRAG---LQPDVVSYA 275
E AR +F + RG S N ++ + + + Y++M RAG + P++ +Y
Sbjct: 36 EDARHVFDELLRRGRGASIYGLNCALADVARHSPAAAVSRYNRMARAGADEVTPNLCTYG 95
Query: 276 LLINAYGKARREEEALA------------------------------------VFEEMLD 299
+LI + A R + A V M
Sbjct: 96 ILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTQ 155
Query: 300 AGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDR--CSPDICSYTTMLSAYVNASDM 357
G P +YNILL +A + + M D C PD+ SYTT+++ + D+
Sbjct: 156 LGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDL 215
Query: 358 EGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTI 417
+ A + + G +PNV+TY ++I K ++K ME+ M NG+ PN + +I
Sbjct: 216 DKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSI 275
Query: 418 MDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNN 477
+ Y + A+ + K+M S G PD N L+ EA ++ +
Sbjct: 276 VHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGL 335
Query: 478 EPGIN 482
+P I
Sbjct: 336 KPEIT 340
>gi|255552808|ref|XP_002517447.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223543458|gb|EEF44989.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 654
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 102/395 (25%), Positives = 188/395 (47%), Gaps = 7/395 (1%)
Query: 96 EMDFLMLITAYGKQGDFNKAEKVLSFMNKKG-YAPSVVSHTALMEAYGRGGRYKNAEAIF 154
++ +++ ++ D+ ++ +L ++N+ Y+PSV ++ ++ R ++ A +F
Sbjct: 98 QLSIRFMVSLISQEADWQRSLALLDWINEVARYSPSVFAYNVVLRNVLRAKKWDLAHGLF 157
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
M+ P TY ++ F +A F E+ L E+ + D ++ +I +
Sbjct: 158 DEMRQRALSPDRYTYSTLITSFGKAGMFDES---LFWLQQMEQDRVSGDLVLYSNLIELS 214
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSLMSF---ETNYKEVSKIYDQMQRAGLQPDV 271
+K Y KA +F + G+ V YNS+++ ++E + +M+ G+ PD
Sbjct: 215 RKLCDYSKAISIFMRLKRSGITPDLVAYNSMINVFGKARLFREARMLVHEMREVGVLPDT 274
Query: 272 VSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKC 331
VSY+ L++ Y + + EAL+VF EM +A NI++D + MV +A +F
Sbjct: 275 VSYSTLLSVYVENEKFVEALSVFAEMNEANCSLDLMTCNIMIDVYGQLDMVKEADRLFWS 334
Query: 332 MRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNN 391
MR+ P++ SY T+L Y A A FR +++ NV+TY T+IK Y K
Sbjct: 335 MRKMGIEPNVVSYNTLLKVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLE 394
Query: 392 LEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNI 451
EK + +M+ GI+PN ++TI+ +GK D A + ++++ S G DQ
Sbjct: 395 HEKATNLVQEMQKRGIEPNAITYSTIISIWGKAGKLDRAAMLFQKLRSSGVEIDQVLYQT 454
Query: 452 LLSLAKTADERNEANELLGNFNHPNNEPGINGLSI 486
++ + A A LL + P+ P + I
Sbjct: 455 MIVAYERAGLVAHAKRLLHDLKCPDIIPRDTAIKI 489
Score = 148 bits (373), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 85/347 (24%), Positives = 183/347 (52%), Gaps = 12/347 (3%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
+I +GK F +A ++ M + G P VS++ L+ Y ++ A ++F M +
Sbjct: 245 MINVFGKARLFREARMLVHEMREVGVLPDTVSYSTLLSVYVENEKFVEALSVFAEMNEAN 304
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
+T I++ ++ + + KEA+ +F ++ K ++P+ ++ ++ +Y +A +
Sbjct: 305 CSLDLMTCNIMIDVYGQLDMVKEADRLFWSM---RKMGIEPNVVSYNTLLKVYGEAELFG 361
Query: 222 KARKLFALMAERGVQQSTVTYNSLMSF---ETNYKEVSKIYDQMQRAGLQPDVVSYALLI 278
+A LF LM + ++Q+ VTYN+++ +++ + + +MQ+ G++P+ ++Y+ +I
Sbjct: 362 EAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLVQEMQKRGIEPNAITYSTII 421
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCS 338
+ +GKA + + A +F+++ +GV Y ++ A+ +G+V A+ + D
Sbjct: 422 SIWGKAGKLDRAAMLFQKLRSSGVEIDQVLYQTMIVAYERAGLVAHAKRLL----HDLKC 477
Query: 339 PDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEI 398
PDI T + A +E A FR+ G V ++ + +I+ +++ ++E+
Sbjct: 478 PDIIPRDTAIKILARAGRIEEATWVFRQAFDAGEVKDISVFRCMIELFSRNKRPANVVEV 537
Query: 399 YDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEM--ESCGFP 443
++KMR G P+ + +++AYGK ++F+ A Y+EM E C FP
Sbjct: 538 FEKMRGAGYFPDSDVIALVLNAYGKLREFEKADAVYREMQEEECVFP 584
Score = 138 bits (348), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 89/356 (25%), Positives = 178/356 (50%), Gaps = 10/356 (2%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
LI K D++KA + + + G P +V++ +++ +G+ ++ A + M+ G
Sbjct: 210 LIELSRKLCDYSKAISIFMRLKRSGITPDLVAYNSMINVFGKARLFREARMLVHEMREVG 269
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
P ++Y +L ++VE KF EA VF + +E L D ++MI +Y + +
Sbjct: 270 VLPDTVSYSTLLSVYVENEKFVEALSVFAEM-NEANCSL--DLMTCNIMIDVYGQLDMVK 326
Query: 222 KARKLFALMAERGVQQSTVTYNSLMSFETN---YKEVSKIYDQMQRAGLQPDVVSYALLI 278
+A +LF M + G++ + V+YN+L+ + E ++ MQR ++ +VV+Y +I
Sbjct: 327 EADRLFWSMRKMGIEPNVVSYNTLLKVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMI 386
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCS 338
YGK+ E+A + +EM G+ P Y+ ++ + +G +D+A +F+ +R
Sbjct: 387 KIYGKSLEHEKATNLVQEMQKRGIEPNAITYSTIISIWGKAGKLDRAAMLFQKLRSSGVE 446
Query: 339 PDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEI 398
D Y TM+ AY A + A++ LK P++I T IK A+ +E+ +
Sbjct: 447 IDQVLYQTMIVAYERAGLVAHAKRLLHDLK----CPDIIPRDTAIKILARAGRIEEATWV 502
Query: 399 YDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLS 454
+ + G + ++F +++ + +NK + V +++M G+ PD ++L+
Sbjct: 503 FRQAFDAGEVKDISVFRCMIELFSRNKRPANVVEVFEKMRGAGYFPDSDVIALVLN 558
Score = 95.1 bits (235), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 75/315 (23%), Positives = 144/315 (45%), Gaps = 8/315 (2%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + + L+ YG+ F +A + M +K +VV++ +++ YG+ ++ A +
Sbjct: 343 NVVSYNTLLKVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLV 402
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
+ MQ G P+A+TY I+ ++ +A K A +F L S ++ DQ ++ MI Y
Sbjct: 403 QEMQKRGIEPNAITYSTIISIWGKAGKLDRAAMLFQKL---RSSGVEIDQVLYQTMIVAY 459
Query: 215 KKAGGYEKARKLFA-LMAERGVQQSTVTYNSLMSFETNYKEVSKIYDQMQRAGLQPDVVS 273
++AG A++L L + + T +++ +E + ++ Q AG D+
Sbjct: 460 ERAGLVAHAKRLLHDLKCPDIIPRDTAI--KILARAGRIEEATWVFRQAFDAGEVKDISV 517
Query: 274 YALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMR 333
+ +I + + +R + VFE+M AG P ++L+A+ ++A V++ M+
Sbjct: 518 FRCMIELFSRNKRPANVVEVFEKMRGAGYFPDSDVIALVLNAYGKLREFEKADAVYREMQ 577
Query: 334 RDRCS-PDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNL 392
+ C PD + MLS Y D E F +L D + + + Y + N L
Sbjct: 578 EEECVFPDEVHF-QMLSLYGARKDFIMVESLFEKLDSDPNINKKELHLVVASIYERQNRL 636
Query: 393 EKMMEIYDKMRVNGI 407
I ++M G+
Sbjct: 637 NDASRIMNRMSKEGM 651
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 45/186 (24%), Positives = 95/186 (51%)
Query: 304 PTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKF 363
P+ AYN++L + D A +F MR+ SPD +Y+T+++++ A + + +
Sbjct: 132 PSVFAYNVVLRNVLRAKKWDLAHGLFDEMRQRALSPDRYTYSTLITSFGKAGMFDESLFW 191
Query: 364 FRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGK 423
++++QD +++ Y LI+ K+ + K + I+ +++ +GI P+ + ++++ +GK
Sbjct: 192 LQQMEQDRVSGDLVLYSNLIELSRKLCDYSKAISIFMRLKRSGITPDLVAYNSMINVFGK 251
Query: 424 NKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGING 483
+ F A + EM G PD + + LLS+ ++ EA + N N +
Sbjct: 252 ARLFREARMLVHEMREVGVLPDTVSYSTLLSVYVENEKFVEALSVFAEMNEANCSLDLMT 311
Query: 484 LSISVD 489
+I +D
Sbjct: 312 CNIMID 317
>gi|297805706|ref|XP_002870737.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297316573|gb|EFH46996.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 680
Score = 159 bits (403), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 105/418 (25%), Positives = 198/418 (47%), Gaps = 44/418 (10%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
LI + D++KA + S + + G P +V++ +++ YG+ +K A + + M +G
Sbjct: 233 LIELSRRLCDYSKAISIFSRLKRSGITPDLVAYNSMINVYGKAKLFKEARVLIKEMNEAG 292
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
P+ ++Y +L ++VE +KF EA VF + E PL D ++MI +Y + +
Sbjct: 293 VSPNTVSYSTLLSVYVENHKFLEALSVFAEM-KEVNCPL--DLTTCNIMIDVYGQLDMVK 349
Query: 222 KARKLFALMAERGVQQSTVTYNSLMSFETN---YKEVSKIYDQMQRAGLQPDVVSYALLI 278
+A +LF + + ++ + V+YN+++ + E ++ MQR ++ +VV+Y +I
Sbjct: 350 EADRLFWSLRKMDIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKDIEQNVVTYNTMI 409
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCS 338
YGK E+A + +EM G+ P Y+ ++ + +G +D+A T+F+ +R
Sbjct: 410 KIYGKTMEHEKATNLVQEMQSRGIEPNAITYSTIISIWGKAGKLDRAATLFQKLRSSGVE 469
Query: 339 PDICSYTTMLSAY-------------------------------VNASDMEGAEKFFRRL 367
D Y TM+ AY A E A FR+
Sbjct: 470 IDQVLYQTMIVAYERVGLMGHAKRLLHELKLPDNIPRETAITILAKAGSTEEATWVFRQA 529
Query: 368 KQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDF 427
+ G V ++ +G +I Y++ ++E+++KMR G P+ +++AYGK ++F
Sbjct: 530 FESGEVKDISVFGCMINLYSRNQRYVNVIEVFEKMRTAGYFPDSNAIAMVLNAYGKQREF 589
Query: 428 DSAVVWYKEM--ESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGING 483
+ A Y+EM E C FP + + +LSL + + L F ++P +N
Sbjct: 590 EKADTVYREMQEEGCVFPDEVHFQ--MLSLYSSKKDFEMVESL---FERLESDPNVNS 642
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 100/407 (24%), Positives = 189/407 (46%), Gaps = 7/407 (1%)
Query: 84 EWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKG-YAPSVVSHTALMEAYG 142
E + S + ++ +++ ++ D+ ++ +L +++++ Y PSV ++ ++
Sbjct: 109 ELFSLLSTYKDRQLSIRFMVSLLSRENDWQRSLALLDWVHEEAKYTPSVFAYNVVLRNVL 168
Query: 143 RGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKP 202
R ++ A +F M+ P TY ++ F + F A L E+ +
Sbjct: 169 RAKQFGIAHGLFDEMRQRALAPDRYTYSTLITSFGKEGMFDSA---LSWLQKMEQDRVSG 225
Query: 203 DQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETN---YKEVSKIY 259
D ++ +I + ++ Y KA +F+ + G+ V YNS+++ +KE +
Sbjct: 226 DLVLYSNLIELSRRLCDYSKAISIFSRLKRSGITPDLVAYNSMINVYGKAKLFKEARVLI 285
Query: 260 DQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAIS 319
+M AG+ P+ VSY+ L++ Y + + EAL+VF EM + NI++D +
Sbjct: 286 KEMNEAGVSPNTVSYSTLLSVYVENHKFLEALSVFAEMKEVNCPLDLTTCNIMIDVYGQL 345
Query: 320 GMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITY 379
MV +A +F +R+ P++ SY T+L Y A A FR +++ NV+TY
Sbjct: 346 DMVKEADRLFWSLRKMDIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKDIEQNVVTY 405
Query: 380 GTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMES 439
T+IK Y K EK + +M+ GI+PN ++TI+ +GK D A ++++ S
Sbjct: 406 NTMIKIYGKTMEHEKATNLVQEMQSRGIEPNAITYSTIISIWGKAGKLDRAATLFQKLRS 465
Query: 440 CGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGINGLSI 486
G DQ ++ + A LL P+N P ++I
Sbjct: 466 SGVEIDQVLYQTMIVAYERVGLMGHAKRLLHELKLPDNIPRETAITI 512
Score = 114 bits (286), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 84/329 (25%), Positives = 159/329 (48%), Gaps = 16/329 (4%)
Query: 91 WWDFNEMD-------FLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGR 143
+W +MD + ++ YG+ F +A + M +K +VV++ +++ YG+
Sbjct: 355 FWSLRKMDIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKDIEQNVVTYNTMIKIYGK 414
Query: 144 GGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPD 203
++ A + + MQS G P+A+TY I+ ++ +A K A +F L S ++ D
Sbjct: 415 TMEHEKATNLVQEMQSRGIEPNAITYSTIISIWGKAGKLDRAATLFQKL---RSSGVEID 471
Query: 204 QKMFHMMIYMYKKAGGYEKARKLFA-LMAERGVQQSTVTYNSLMSFETNYKEVSKIYDQM 262
Q ++ MI Y++ G A++L L + + T ++++ + +E + ++ Q
Sbjct: 472 QVLYQTMIVAYERVGLMGHAKRLLHELKLPDNIPRETAI--TILAKAGSTEEATWVFRQA 529
Query: 263 QRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMV 322
+G D+ + +IN Y + +R + VFE+M AG P A ++L+A+
Sbjct: 530 FESGEVKDISVFGCMINLYSRNQRYVNVIEVFEKMRTAGYFPDSNAIAMVLNAYGKQREF 589
Query: 323 DQARTVFKCMRRDRCS-PDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGT 381
++A TV++ M+ + C PD + MLS Y + D E E F RL+ D V + +
Sbjct: 590 EKADTVYREMQEEGCVFPDEVHFQ-MLSLYSSKKDFEMVESLFERLESDPNVNSKELHLV 648
Query: 382 LIKGYAKVNNLEKMMEIYDKMRVNGI-KP 409
+ Y + + L + ++MR GI KP
Sbjct: 649 VAALYERADKLNDASRVMNRMRERGILKP 677
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 45/191 (23%), Positives = 94/191 (49%)
Query: 299 DAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDME 358
+A P+ AYN++L + A +F MR+ +PD +Y+T+++++ +
Sbjct: 150 EAKYTPSVFAYNVVLRNVLRAKQFGIAHGLFDEMRQRALAPDRYTYSTLITSFGKEGMFD 209
Query: 359 GAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIM 418
A + ++++QD +++ Y LI+ ++ + K + I+ +++ +GI P+ + +++
Sbjct: 210 SALSWLQKMEQDRVSGDLVLYSNLIELSRRLCDYSKAISIFSRLKRSGITPDLVAYNSMI 269
Query: 419 DAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNE 478
+ YGK K F A V KEM G P+ + + LLS+ + EA + N
Sbjct: 270 NVYGKAKLFKEARVLIKEMNEAGVSPNTVSYSTLLSVYVENHKFLEALSVFAEMKEVNCP 329
Query: 479 PGINGLSISVD 489
+ +I +D
Sbjct: 330 LDLTTCNIMID 340
>gi|326504498|dbj|BAJ91081.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 793
Score = 159 bits (403), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 103/366 (28%), Positives = 187/366 (51%), Gaps = 46/366 (12%)
Query: 129 PSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLF------------ 176
P ++TAL+ A+ R R+++A A+FRRM ++G +P+ +TY ++L ++
Sbjct: 176 PDASAYTALVSAFSRASRFRDAVAVFRRMVANGIQPAIVTYNVVLHVYSKIAVPWKDVVA 235
Query: 177 -VEANK-----------------------FKEAEEVFMTLLDEEKSP-LKPDQKMFHMMI 211
V++ K +KEA +VF DE ++ +PD+ F+ ++
Sbjct: 236 LVDSMKNDGIPLDRYTYNTLISCCRRGALYKEAAKVF----DEMRAAGFEPDKVTFNSLL 291
Query: 212 YMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETN---YKEVSKIYDQMQRAGLQ 268
+Y KA +++A + M G S VTYNSL+S KE +++ ++M+ G+Q
Sbjct: 292 DVYGKARMHDEAIGVLKEMELGGCPPSVVTYNSLISSYVKDGLLKEAAELKEEMEVKGIQ 351
Query: 269 PDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTV 328
PDV++Y LI+ +A + + A+ ++EML G +P YN L+ + G + V
Sbjct: 352 PDVITYTTLISGLDRAGKIDAAIGTYDEMLRNGCKPNLCTYNALIKLHGVRGKFPEMMAV 411
Query: 329 FKCMRRDRCSPDICSYTTMLSAY-VNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYA 387
F +R PD+ ++ T+L+ + N D E F+ +K+ G+VP TY +LI Y+
Sbjct: 412 FDDLRSAGFVPDVVTWNTLLAVFGQNGLDSE-VSGVFKEMKKSGYVPERDTYVSLISSYS 470
Query: 388 KVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQK 447
+ ++ MEIY +M GI P+ + + ++ A + ++ A + EME+ PD+
Sbjct: 471 RCGLFDQSMEIYKRMIEAGIYPDISTYNAVLSALARGGRWEQAEKLFAEMENLDCRPDEL 530
Query: 448 AKNILL 453
+ + LL
Sbjct: 531 SYSSLL 536
Score = 145 bits (366), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 87/298 (29%), Positives = 160/298 (53%), Gaps = 9/298 (3%)
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKK-AGGY 220
P P A Y ++ F A++F++A VF ++ + ++P +++++++Y K A +
Sbjct: 174 PEPDASAYTALVSAFSRASRFRDAVAVFRRMV---ANGIQPAIVTYNVVLHVYSKIAVPW 230
Query: 221 EKARKLFALMAERGVQQSTVTYNSLMSFETN---YKEVSKIYDQMQRAGLQPDVVSYALL 277
+ L M G+ TYN+L+S YKE +K++D+M+ AG +PD V++ L
Sbjct: 231 KDVVALVDSMKNDGIPLDRYTYNTLISCCRRGALYKEAAKVFDEMRAAGFEPDKVTFNSL 290
Query: 278 INAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRC 337
++ YGKAR +EA+ V +EM G P+ YN L+ ++ G++ +A + + M
Sbjct: 291 LDVYGKARMHDEAIGVLKEMELGGCPPSVVTYNSLISSYVKDGLLKEAAELKEEMEVKGI 350
Query: 338 SPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMME 397
PD+ +YTT++S A ++ A + + ++G PN+ TY LIK + +MM
Sbjct: 351 QPDVITYTTLISGLDRAGKIDAAIGTYDEMLRNGCKPNLCTYNALIKLHGVRGKFPEMMA 410
Query: 398 IYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVW-YKEMESCGFPPDQKAKNILLS 454
++D +R G P+ + T++ +G+N DS V +KEM+ G+ P++ L+S
Sbjct: 411 VFDDLRSAGFVPDVVTWNTLLAVFGQN-GLDSEVSGVFKEMKKSGYVPERDTYVSLIS 467
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 83/320 (25%), Positives = 155/320 (48%), Gaps = 6/320 (1%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
LI+ + + +A KV M G+ P V+ +L++ YG+ + A + + M+ G
Sbjct: 255 LISCCRRGALYKEAAKVFDEMRAAGFEPDKVTFNSLLDVYGKARMHDEAIGVLKEMELGG 314
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
PS +TY ++ +V+ KEA E+ + E ++PD + +I +AG +
Sbjct: 315 CPPSVVTYNSLISSYVKDGLLKEAAELKEEM---EVKGIQPDVITYTTLISGLDRAGKID 371
Query: 222 KARKLFALMAERGVQQSTVTYNSLMSFET---NYKEVSKIYDQMQRAGLQPDVVSYALLI 278
A + M G + + TYN+L+ + E+ ++D ++ AG PDVV++ L+
Sbjct: 372 AAIGTYDEMLRNGCKPNLCTYNALIKLHGVRGKFPEMMAVFDDLRSAGFVPDVVTWNTLL 431
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCS 338
+G+ + E VF+EM +G P Y L+ +++ G+ DQ+ ++K M
Sbjct: 432 AVFGQNGLDSEVSGVFKEMKKSGYVPERDTYVSLISSYSRCGLFDQSMEIYKRMIEAGIY 491
Query: 339 PDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEI 398
PDI +Y +LSA E AEK F ++ P+ ++Y +L+ YA L+KM +
Sbjct: 492 PDISTYNAVLSALARGGRWEQAEKLFAEMENLDCRPDELSYSSLLHAYANAKKLDKMKAL 551
Query: 399 YDKMRVNGIKPNQTIFTTIM 418
+ + I+ + + T++
Sbjct: 552 SEDIYAEKIESHHGLVKTLV 571
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 75/259 (28%), Positives = 128/259 (49%), Gaps = 4/259 (1%)
Query: 201 KPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMS----FETNYKEVS 256
+PD + ++ + +A + A +F M G+Q + VTYN ++ +K+V
Sbjct: 175 EPDASAYTALVSAFSRASRFRDAVAVFRRMVANGIQPAIVTYNVVLHVYSKIAVPWKDVV 234
Query: 257 KIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAF 316
+ D M+ G+ D +Y LI+ + +EA VF+EM AG P +N LLD +
Sbjct: 235 ALVDSMKNDGIPLDRYTYNTLISCCRRGALYKEAAKVFDEMRAAGFEPDKVTFNSLLDVY 294
Query: 317 AISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNV 376
+ M D+A V K M C P + +Y +++S+YV ++ A + ++ G P+V
Sbjct: 295 GKARMHDEAIGVLKEMELGGCPPSVVTYNSLISSYVKDGLLKEAAELKEEMEVKGIQPDV 354
Query: 377 ITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKE 436
ITY TLI G + ++ + YD+M NG KPN + ++ +G F + + +
Sbjct: 355 ITYTTLISGLDRAGKIDAAIGTYDEMLRNGCKPNLCTYNALIKLHGVRGKFPEMMAVFDD 414
Query: 437 MESCGFPPDQKAKNILLSL 455
+ S GF PD N LL++
Sbjct: 415 LRSAGFVPDVVTWNTLLAV 433
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 95/416 (22%), Positives = 200/416 (48%), Gaps = 13/416 (3%)
Query: 44 AVAVLRSERTRGQP---LPKDLVLGTLVRLKQLKKWNVVSEVLEWLRIQSWWDFNEMDFL 100
A+ VL+ G P + + ++ + V+ LK+ + E +E IQ + + +
Sbjct: 303 AIGVLKEMELGGCPPSVVTYNSLISSYVKDGLLKEAAELKEEMEVKGIQP----DVITYT 358
Query: 101 MLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSS 160
LI+ + G + A M + G P++ ++ AL++ +G G++ A+F ++S+
Sbjct: 359 TLISGLDRAGKIDAAIGTYDEMLRNGCKPNLCTYNALIKLHGVRGKFPEMMAVFDDLRSA 418
Query: 161 GPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGY 220
G P +T+ +L +F + E VF + +KS P++ + +I Y + G +
Sbjct: 419 GFVPDVVTWNTLLAVFGQNGLDSEVSGVFKEM---KKSGYVPERDTYVSLISSYSRCGLF 475
Query: 221 EKARKLFALMAERGVQQSTVTYNSLMSFETN---YKEVSKIYDQMQRAGLQPDVVSYALL 277
+++ +++ M E G+ TYN+++S +++ K++ +M+ +PD +SY+ L
Sbjct: 476 DQSMEIYKRMIEAGIYPDISTYNAVLSALARGGRWEQAEKLFAEMENLDCRPDELSYSSL 535
Query: 278 INAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRC 337
++AY A++ ++ A+ E++ + H L+ + + + F + R RC
Sbjct: 536 LHAYANAKKLDKMKALSEDIYAEKIESHHGLVKTLVLVNSKVNNLSETEKAFLELGRRRC 595
Query: 338 SPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMME 397
S DI M+S Y ++ E+ +K + TY +L+ Y+++ + EK
Sbjct: 596 SLDINVLNAMVSVYGKNRMVKKVEEILSLMKGSSINLSTATYNSLMHMYSRLGDCEKCEN 655
Query: 398 IYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILL 453
I +++ +G +P++ + T++ AYG+ A + EM+S G PD NI +
Sbjct: 656 ILTEIKSSGARPDRYSYNTMIYAYGRKGQMKEASRLFSEMKSSGLIPDIVTYNIFV 711
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 95/388 (24%), Positives = 193/388 (49%), Gaps = 15/388 (3%)
Query: 45 VAVLRSERTRGQPLPKDLVLGTLVRLKQLKKWNVVSEVLEWLRIQSWWDFNEMDFLMLIT 104
VA++ S + G PL + + ++ + ++V + +R + ++ +++ F L+
Sbjct: 234 VALVDSMKNDGIPLDRYTYNTLISCCRRGALYKEAAKVFDEMR-AAGFEPDKVTFNSLLD 292
Query: 105 AYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRP 164
YGK ++A VL M G PSVV++ +L+ +Y + G K A + M+ G +P
Sbjct: 293 VYGKARMHDEAIGVLKEMELGGCPPSVVTYNSLISSYVKDGLLKEAAELKEEMEVKGIQP 352
Query: 165 SALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKAR 224
+TY ++ A K A + +L ++ KP+ ++ +I ++ G + +
Sbjct: 353 DVITYTTLISGLDRAGKIDAAIGTYDEML---RNGCKPNLCTYNALIKLHGVRGKFPEMM 409
Query: 225 KLFALMAERGVQQSTVTYNSLMS-FETNY--KEVSKIYDQMQRAGLQPDVVSYALLINAY 281
+F + G VT+N+L++ F N EVS ++ +M+++G P+ +Y LI++Y
Sbjct: 410 AVFDDLRSAGFVPDVVTWNTLLAVFGQNGLDSEVSGVFKEMKKSGYVPERDTYVSLISSY 469
Query: 282 GKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDI 341
+ ++++ +++ M++AG+ P YN +L A A G +QA +F M C PD
Sbjct: 470 SRCGLFDQSMEIYKRMIEAGIYPDISTYNAVLSALARGGRWEQAEKLFAEMENLDCRPDE 529
Query: 342 CSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGY----AKVNNLEKMME 397
SY+++L AY NA ++ + L +D + + ++ L+K +KVNNL + +
Sbjct: 530 LSYSSLLHAYANAKKLDK----MKALSEDIYAEKIESHHGLVKTLVLVNSKVNNLSETEK 585
Query: 398 IYDKMRVNGIKPNQTIFTTIMDAYGKNK 425
+ ++ + + ++ YGKN+
Sbjct: 586 AFLELGRRRCSLDINVLNAMVSVYGKNR 613
Score = 126 bits (316), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 76/329 (23%), Positives = 156/329 (47%), Gaps = 12/329 (3%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
L+ +G+ G ++ V M K GY P ++ +L+ +Y R G + + I++RM +G
Sbjct: 430 LLAVFGQNGLDSEVSGVFKEMKKSGYVPERDTYVSLISSYSRCGLFDQSMEIYKRMIEAG 489
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
P TY +L ++++AE++F + E +PD+ + +++ Y A +
Sbjct: 490 IYPDISTYNAVLSALARGGRWEQAEKLFAEM---ENLDCRPDELSYSSLLHAYANAKKLD 546
Query: 222 KARKL----FA--LMAERGVQQSTVTYNSLMSFETNYKEVSKIYDQMQRAGLQPDVVSYA 275
K + L +A + + G+ ++ V NS ++ N E K + ++ R D+
Sbjct: 547 KMKALSEDIYAEKIESHHGLVKTLVLVNSKVN---NLSETEKAFLELGRRRCSLDINVLN 603
Query: 276 LLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRD 335
+++ YGK R ++ + M + + + YN L+ ++ G ++ + ++
Sbjct: 604 AMVSVYGKNRMVKKVEEILSLMKGSSINLSTATYNSLMHMYSRLGDCEKCENILTEIKSS 663
Query: 336 RCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKM 395
PD SY TM+ AY M+ A + F +K G +P+++TY +K Y + E+
Sbjct: 664 GARPDRYSYNTMIYAYGRKGQMKEASRLFSEMKSSGLIPDIVTYNIFVKSYVANSMFEEA 723
Query: 396 MEIYDKMRVNGIKPNQTIFTTIMDAYGKN 424
+++ M G KPN+ + +I+ Y ++
Sbjct: 724 IDLVRYMVTRGCKPNERTYNSILQEYCRH 752
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 77/306 (25%), Positives = 148/306 (48%), Gaps = 35/306 (11%)
Query: 99 FLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQ 158
++ LI++Y + G F+++ ++ M + G P + ++ A++ A RGGR++ AE +F M+
Sbjct: 462 YVSLISSYSRCGLFDQSMEIYKRMIEAGIYPDISTYNAVLSALARGGRWEQAEKLFAEME 521
Query: 159 SSGPRPSALTYQIILKLFVEANKFKE----AEEVF-------------MTLLDEEKSPLK 201
+ RP L+Y +L + A K + +E+++ + L++ + + L
Sbjct: 522 NLDCRPDELSYSSLLHAYANAKKLDKMKALSEDIYAEKIESHHGLVKTLVLVNSKVNNLS 581
Query: 202 PDQKMF---------------HMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLM 246
+K F + M+ +Y K +K ++ +LM + ST TYNSLM
Sbjct: 582 ETEKAFLELGRRRCSLDINVLNAMVSVYGKNRMVKKVEEILSLMKGSSINLSTATYNSLM 641
Query: 247 SFETNYKEVSK---IYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVR 303
+ + K I +++ +G +PD SY +I AYG+ + +EA +F EM +G+
Sbjct: 642 HMYSRLGDCEKCENILTEIKSSGARPDRYSYNTMIYAYGRKGQMKEASRLFSEMKSSGLI 701
Query: 304 PTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKF 363
P YNI + ++ + M ++A + + M C P+ +Y ++L Y + A+ F
Sbjct: 702 PDIVTYNIFVKSYVANSMFEEAIDLVRYMVTRGCKPNERTYNSILQEYCRHGKIADAKSF 761
Query: 364 FRRLKQ 369
L Q
Sbjct: 762 LSNLPQ 767
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 53/174 (30%), Positives = 80/174 (45%), Gaps = 7/174 (4%)
Query: 304 PTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVN-ASDMEGAEK 362
P AY L+ AF+ + A VF+ M + P I +Y +L Y A +
Sbjct: 176 PDASAYTALVSAFSRASRFRDAVAVFRRMVANGIQPAIVTYNVVLHVYSKIAVPWKDVVA 235
Query: 363 FFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYG 422
+K DG + TY TLI + ++ +++D+MR G +P++ F +++D YG
Sbjct: 236 LVDSMKNDGIPLDRYTYNTLISCCRRGALYKEAAKVFDEMRAAGFEPDKVTFNSLLDVYG 295
Query: 423 KNKDFDSAVVWYKEMESCGFPPDQKAKNILLS------LAKTADERNEANELLG 470
K + D A+ KEME G PP N L+S L K A E E E+ G
Sbjct: 296 KARMHDEAIGVLKEMELGGCPPSVVTYNSLISSYVKDGLLKEAAELKEEMEVKG 349
>gi|168045490|ref|XP_001775210.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162673423|gb|EDQ59946.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 404
Score = 159 bits (403), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 107/390 (27%), Positives = 189/390 (48%), Gaps = 14/390 (3%)
Query: 94 FNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKG-YAPSVVSHTALMEAYGRGGRYKNAEA 152
+ D ++T +Q D+ +V S+ K+ Y P+ +T L+ GR GR NA
Sbjct: 8 LSPFDITCVLTELQRQHDWRCTLEVFSWSKKQSWYCPNSRLYTRLIGFLGREGRVHNATL 67
Query: 153 IFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIY 212
+F+ M + TY ++ + +A F+EA VF + + + +P+ + +I
Sbjct: 68 LFQEMLLEKCQADQYTYTALVNAYGKAKMFEEALAVFSHMKESNEPNCQPNTVTCNALID 127
Query: 213 MYKKAGGYEKARKLFALM------AERGVQQSTVTYNSLMS-------FETNYKEVSKIY 259
K G Y++A ++F M E G + + +TYN L+ + K + +
Sbjct: 128 ALVKGGLYDQAIQVFFDMRDGTNGLEHGCEPNVITYNVLIDALCKEGLLDIGMKVLQYMR 187
Query: 260 DQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAIS 319
D +QP+ +Y LINA GK E+A + + M++ GV+P H Y L+DA+ +
Sbjct: 188 DGNTDQSVQPNSATYNTLINACGKGGLYEKAEELVDLMVEHGVQPDHITYTALIDAYGKA 247
Query: 320 GMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITY 379
G+ + A FK M+ S D+ +YT M+ AY + AE+ F+ ++ G PN +TY
Sbjct: 248 GLWENAENTFKGMKGTNVSVDVMAYTAMIDAYGREGLYQKAEEMFKMMQHSGLRPNQVTY 307
Query: 380 GTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMES 439
+L++ Y K E+ +++ MR +G + N I+++++DAYGK ++ A M
Sbjct: 308 LSLMEAYGKAGLPEESRNVFNIMRESGYEGNVLIYSSLIDAYGKAGNYLEAARMLDMMRR 367
Query: 440 CGFPPDQKAKNILLSLAKTADERNEANELL 469
G P+ + +LS ++ EA LL
Sbjct: 368 AGCQPNLITYSAILSSCCKSNCWVEAQVLL 397
Score = 155 bits (392), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 104/399 (26%), Positives = 190/399 (47%), Gaps = 13/399 (3%)
Query: 56 QPLPKDLVLGTLVRLKQLKKWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKA 115
+PL + L L++ W EV W + QSW+ N + LI G++G + A
Sbjct: 6 KPLSPFDITCVLTELQRQHDWRCTLEVFSWSKKQSWYCPNSRLYTRLIGFLGREGRVHNA 65
Query: 116 EKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG---PRPSALTYQII 172
+ M + ++TAL+ AYG+ ++ A A+F M+ S +P+ +T +
Sbjct: 66 TLLFQEMLLEKCQADQYTYTALVNAYGKAKMFEEALAVFSHMKESNEPNCQPNTVTCNAL 125
Query: 173 LKLFVEANKFKEAEEVFMTLLDEE---KSPLKPDQKMFHMMIYMYKKAGGYEKARKLFAL 229
+ V+ + +A +VF + D + +P+ ++++I K G + K+
Sbjct: 126 IDALVKGGLYDQAIQVFFDMRDGTNGLEHGCEPNVITYNVLIDALCKEGLLDIGMKVLQY 185
Query: 230 M----AERGVQQSTVTYNSLMSFETN---YKEVSKIYDQMQRAGLQPDVVSYALLINAYG 282
M ++ VQ ++ TYN+L++ Y++ ++ D M G+QPD ++Y LI+AYG
Sbjct: 186 MRDGNTDQSVQPNSATYNTLINACGKGGLYEKAEELVDLMVEHGVQPDHITYTALIDAYG 245
Query: 283 KARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDIC 342
KA E A F+ M V AY ++DA+ G+ +A +FK M+ P+
Sbjct: 246 KAGLWENAENTFKGMKGTNVSVDVMAYTAMIDAYGREGLYQKAEEMFKMMQHSGLRPNQV 305
Query: 343 SYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKM 402
+Y +++ AY A E + F +++ G+ NV+ Y +LI Y K N + + D M
Sbjct: 306 TYLSLMEAYGKAGLPEESRNVFNIMRESGYEGNVLIYSSLIDAYGKAGNYLEAARMLDMM 365
Query: 403 RVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCG 441
R G +PN ++ I+ + K+ + A V + ++ G
Sbjct: 366 RRAGCQPNLITYSAILSSCCKSNCWVEAQVLLRRLQVFG 404
Score = 98.6 bits (244), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 73/255 (28%), Positives = 113/255 (44%), Gaps = 18/255 (7%)
Query: 242 YNSLMSF---ETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEML 298
Y L+ F E + ++ +M Q D +Y L+NAYGKA+ EEALAVF M
Sbjct: 49 YTRLIGFLGREGRVHNATLLFQEMLLEKCQADQYTYTALVNAYGKAKMFEEALAVFSHMK 108
Query: 299 DAG---VRPTHKAYNILLDAFAISGMVDQARTVFKCMR------RDRCSPDICSYTTMLS 349
++ +P N L+DA G+ DQA VF MR C P++ +Y ++
Sbjct: 109 ESNEPNCQPNTVTCNALIDALVKGGLYDQAIQVFFDMRDGTNGLEHGCEPNVITYNVLID 168
Query: 350 AYVNASDMEGAEKFFRRLKQDG-----FVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRV 404
A ++ K + ++ DG PN TY TLI K EK E+ D M
Sbjct: 169 ALCKEGLLDIGMKVLQYMR-DGNTDQSVQPNSATYNTLINACGKGGLYEKAEELVDLMVE 227
Query: 405 NGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNE 464
+G++P+ +T ++DAYGK +++A +K M+ D A ++ +
Sbjct: 228 HGVQPDHITYTALIDAYGKAGLWENAENTFKGMKGTNVSVDVMAYTAMIDAYGREGLYQK 287
Query: 465 ANELLGNFNHPNNEP 479
A E+ H P
Sbjct: 288 AEEMFKMMQHSGLRP 302
>gi|299471526|emb|CBN80012.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 732
Score = 159 bits (403), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 104/419 (24%), Positives = 198/419 (47%), Gaps = 9/419 (2%)
Query: 58 LPKDLVLGTLVRLKQLKKWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEK 117
+P + TL KQ W +VL+ ++ Q + ++ I A G + +A +
Sbjct: 149 MPMSHLKATLREAKQYGDWRKALDVLDRMQEQGV-KPDSQNYSSAIAACGNARQWERAVE 207
Query: 118 VLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFV 177
+L+ M +G P V+++++ + A + R+K A + R M+ G +P+ + Y +
Sbjct: 208 LLASMAARGTPPDVLTYSSAIAACAKVSRWKEAVGLLRSMKGQGVKPNVIVYSAAISACR 267
Query: 178 EANKFKEAEEVFMTLLDEEKS-PLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQ 236
+ ++ E + LL E + L PD + +I K G +E A +L M +GV
Sbjct: 268 KGGQW----ETAVDLLKEMPAVGLAPDVITYSTVIDACAKRGQWEPAFRLLMEMPTKGVV 323
Query: 237 QSTVTYNSLMSFET---NYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAV 293
+ +TY+ ++ ++E + +MQ G+ PDV++Y+ I+A K + EEA+ +
Sbjct: 324 ANIITYSIVIGACAKWGQWEEAVALLREMQENGVAPDVITYSSTISACAKKGQWEEAVGL 383
Query: 294 FEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVN 353
EM GV P +Y I++ A A G +A + + M+ PD+ +Y+ + A
Sbjct: 384 LREMPMEGVTPNAISYGIVISACAKRGRWREAIDLLQEMQAHGVPPDVINYSAAIDACAQ 443
Query: 354 ASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTI 413
AS E A R + G PNVI+Y + I AK + +E+ +M +G+ P+
Sbjct: 444 ASRWEQALWLLREMPATGLTPNVISYNSAIDACAKTGRSKIAVELLREMPAHGLAPDVIT 503
Query: 414 FTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNF 472
++ ++ + + ++ A+ ++EM+ G PD + N ++ EA ++LG
Sbjct: 504 YSAVIASCAMGRQWEEALDLFREMQRQGITPDVVSCNTAINACAQGGWWEEALDVLGEM 562
Score = 152 bits (383), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 107/430 (24%), Positives = 201/430 (46%), Gaps = 9/430 (2%)
Query: 44 AVAVLRSERTRGQPLPKDLVLGT-LVRLKQLKKWNVVSEVLEWLRIQSWWDFNEMDFLML 102
AV +L S RG P P L + + ++ +W +L ++ Q N + +
Sbjct: 205 AVELLASMAARGTP-PDVLTYSSAIAACAKVSRWKEAVGLLRSMKGQGV-KPNVIVYSAA 262
Query: 103 ITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGP 162
I+A K G + A +L M G AP V++++ +++A + G+++ A + M + G
Sbjct: 263 ISACRKGGQWETAVDLLKEMPAVGLAPDVITYSTVIDACAKRGQWEPAFRLLMEMPTKGV 322
Query: 163 RPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEK 222
+ +TY I++ K+ + EE L + +++ + PD + I K G +E+
Sbjct: 323 VANIITYSIVIGACA---KWGQWEEAVALLREMQENGVAPDVITYSSTISACAKKGQWEE 379
Query: 223 ARKLFALMAERGVQQSTVTYNSLMSF---ETNYKEVSKIYDQMQRAGLQPDVVSYALLIN 279
A L M GV + ++Y ++S ++E + +MQ G+ PDV++Y+ I+
Sbjct: 380 AVGLLREMPMEGVTPNAISYGIVISACAKRGRWREAIDLLQEMQAHGVPPDVINYSAAID 439
Query: 280 AYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSP 339
A +A R E+AL + EM G+ P +YN +DA A +G A + + M +P
Sbjct: 440 ACAQASRWEQALWLLREMPATGLTPNVISYNSAIDACAKTGRSKIAVELLREMPAHGLAP 499
Query: 340 DICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIY 399
D+ +Y+ ++++ E A FR +++ G P+V++ T I A+ E+ +++
Sbjct: 500 DVITYSAVIASCAMGRQWEEALDLFREMQRQGITPDVVSCNTAINACAQGGWWEEALDVL 559
Query: 400 DKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTA 459
+M G+ P+ + T +DA K + + +EM + G PD + +S
Sbjct: 560 GEMPTMGLVPDAISYRTAIDACAKGDRWKEIIDLLREMSTVGLTPDAISYRFAMSACSVD 619
Query: 460 DERNEANELL 469
EA LL
Sbjct: 620 GLWKEALVLL 629
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 91/402 (22%), Positives = 186/402 (46%), Gaps = 6/402 (1%)
Query: 97 MDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRR 156
+ + +I A K+G + A ++L M KG ++++++ ++ A + G+++ A A+ R
Sbjct: 292 ITYSTVIDACAKRGQWEPAFRLLMEMPTKGVVANIITYSIVIGACAKWGQWEEAVALLRE 351
Query: 157 MQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKK 216
MQ +G P +TY + + +++EA + + E + P+ + ++I K
Sbjct: 352 MQENGVAPDVITYSSTISACAKKGQWEEAVGLLREMPMEG---VTPNAISYGIVISACAK 408
Query: 217 AGGYEKARKLFALMAERGVQQSTVTYNSLM---SFETNYKEVSKIYDQMQRAGLQPDVVS 273
G + +A L M GV + Y++ + + + +++ + +M GL P+V+S
Sbjct: 409 RGRWREAIDLLQEMQAHGVPPDVINYSAAIDACAQASRWEQALWLLREMPATGLTPNVIS 468
Query: 274 YALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMR 333
Y I+A K R + A+ + EM G+ P Y+ ++ + A+ ++A +F+ M+
Sbjct: 469 YNSAIDACAKTGRSKIAVELLREMPAHGLAPDVITYSAVIASCAMGRQWEEALDLFREMQ 528
Query: 334 RDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLE 393
R +PD+ S T ++A E A + G VP+ I+Y T I AK + +
Sbjct: 529 RQGITPDVVSCNTAINACAQGGWWEEALDVLGEMPTMGLVPDAISYRTAIDACAKGDRWK 588
Query: 394 KMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILL 453
+++++ +M G+ P+ + M A + + A+V ++M + G PD N +
Sbjct: 589 EIIDLLREMSTVGLTPDAISYRFAMSACSVDGLWKEALVLLRDMLAVGLSPDVVTYNSAI 648
Query: 454 SLAKTADERNEANELLGNFNHPNNEPGINGLSISVDEEDDDD 495
+ EA LL P +N + ++D + D
Sbjct: 649 NACAKGGRWKEATVLLRQMPTFGLAPDVNSFNAAIDACGNGD 690
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 95/408 (23%), Positives = 182/408 (44%), Gaps = 41/408 (10%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + + ++I A K G + +A +L M + G AP V+++++ + A + G+++ A +
Sbjct: 325 NIITYSIVIGACAKWGQWEEAVALLREMQENGVAPDVITYSSTISACAKKGQWEEAVGLL 384
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
R M G P+A++Y I++ + +++EA ++ + + + PD + I
Sbjct: 385 REMPMEGVTPNAISYGIVISACAKRGRWREAIDLLQEM---QAHGVPPDVINYSAAIDAC 441
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSLM--SFETNYKEVS-KIYDQMQRAGLQPDV 271
+A +E+A L M G+ + ++YNS + +T +++ ++ +M GL PDV
Sbjct: 442 AQASRWEQALWLLREMPATGLTPNVISYNSAIDACAKTGRSKIAVELLREMPAHGLAPDV 501
Query: 272 VSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKC 331
++Y+ +I + R+ EEAL +F EM G+ P + N ++A A G ++A V
Sbjct: 502 ITYSAVIASCAMGRQWEEALDLFREMQRQGITPDVVSCNTAINACAQGGWWEEALDVLGE 561
Query: 332 MRRDRCSPDICSYTTMLSAY-------------------------------VNASDMEGA 360
M PD SY T + A ++A ++G
Sbjct: 562 MPTMGLVPDAISYRTAIDACAKGDRWKEIIDLLREMSTVGLTPDAISYRFAMSACSVDGL 621
Query: 361 EK----FFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTT 416
K R + G P+V+TY + I AK ++ + +M G+ P+ F
Sbjct: 622 WKEALVLLRDMLAVGLSPDVVTYNSAINACAKGGRWKEATVLLRQMPTFGLAPDVNSFNA 681
Query: 417 IMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNE 464
+DA G + +AV EM + G P++ + K E+++
Sbjct: 682 AIDACGNGDQWGTAVEVLFEMRALGVSPNEATYLTAMYACKRCGEKDD 729
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 73/288 (25%), Positives = 137/288 (47%), Gaps = 3/288 (1%)
Query: 161 GPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGY 220
G R + + + EA ++ + + L ++ +KPD + + I A +
Sbjct: 143 GGRQAGMPMSHLKATLREAKQYGDWRKALDVLDRMQEQGVKPDSQNYSSAIAACGNARQW 202
Query: 221 EKARKLFALMAERGVQQSTVTYNSLMSF---ETNYKEVSKIYDQMQRAGLQPDVVSYALL 277
E+A +L A MA RG +TY+S ++ + +KE + M+ G++P+V+ Y+
Sbjct: 203 ERAVELLASMAARGTPPDVLTYSSAIAACAKVSRWKEAVGLLRSMKGQGVKPNVIVYSAA 262
Query: 278 INAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRC 337
I+A K + E A+ + +EM G+ P Y+ ++DA A G + A + M
Sbjct: 263 ISACRKGGQWETAVDLLKEMPAVGLAPDVITYSTVIDACAKRGQWEPAFRLLMEMPTKGV 322
Query: 338 SPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMME 397
+I +Y+ ++ A E A R ++++G P+VITY + I AK E+ +
Sbjct: 323 VANIITYSIVIGACAKWGQWEEAVALLREMQENGVAPDVITYSSTISACAKKGQWEEAVG 382
Query: 398 IYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPD 445
+ +M + G+ PN + ++ A K + A+ +EM++ G PPD
Sbjct: 383 LLREMPMEGVTPNAISYGIVISACAKRGRWREAIDLLQEMQAHGVPPD 430
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 71/278 (25%), Positives = 127/278 (45%), Gaps = 3/278 (1%)
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETN---YKEVSKIYDQMQRAGLQPDV 271
K+ G + KA + M E+GV+ + Y+S ++ N ++ ++ M G PDV
Sbjct: 162 KQYGDWRKALDVLDRMQEQGVKPDSQNYSSAIAACGNARQWERAVELLASMAARGTPPDV 221
Query: 272 VSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKC 331
++Y+ I A K R +EA+ + M GV+P Y+ + A G + A + K
Sbjct: 222 LTYSSAIAACAKVSRWKEAVGLLRSMKGQGVKPNVIVYSAAISACRKGGQWETAVDLLKE 281
Query: 332 MRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNN 391
M +PD+ +Y+T++ A E A + + G V N+ITY +I AK
Sbjct: 282 MPAVGLAPDVITYSTVIDACAKRGQWEPAFRLLMEMPTKGVVANIITYSIVIGACAKWGQ 341
Query: 392 LEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNI 451
E+ + + +M+ NG+ P+ +++ + A K ++ AV +EM G P+ + I
Sbjct: 342 WEEAVALLREMQENGVAPDVITYSSTISACAKKGQWEEAVGLLREMPMEGVTPNAISYGI 401
Query: 452 LLSLAKTADERNEANELLGNFNHPNNEPGINGLSISVD 489
++S EA +LL P + S ++D
Sbjct: 402 VISACAKRGRWREAIDLLQEMQAHGVPPDVINYSAAID 439
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 69/304 (22%), Positives = 134/304 (44%), Gaps = 6/304 (1%)
Query: 97 MDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRR 156
+++ I A + + +A +L M G P+V+S+ + ++A + GR K A + R
Sbjct: 432 INYSAAIDACAQASRWEQALWLLREMPATGLTPNVISYNSAIDACAKTGRSKIAVELLRE 491
Query: 157 MQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKK 216
M + G P +TY ++ +++EA ++F + ++ + PD + I +
Sbjct: 492 MPAHGLAPDVITYSAVIASCAMGRQWEEALDLFREM---QRQGITPDVVSCNTAINACAQ 548
Query: 217 AGGYEKARKLFALMAERGVQQSTVTYNSLMSFETN---YKEVSKIYDQMQRAGLQPDVVS 273
G +E+A + M G+ ++Y + + +KE+ + +M GL PD +S
Sbjct: 549 GGWWEEALDVLGEMPTMGLVPDAISYRTAIDACAKGDRWKEIIDLLREMSTVGLTPDAIS 608
Query: 274 YALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMR 333
Y ++A +EAL + +ML G+ P YN ++A A G +A + + M
Sbjct: 609 YRFAMSACSVDGLWKEALVLLRDMLAVGLSPDVVTYNSAINACAKGGRWKEATVLLRQMP 668
Query: 334 RDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLE 393
+PD+ S+ + A N A + ++ G PN TY T + + +
Sbjct: 669 TFGLAPDVNSFNAAIDACGNGDQWGTAVEVLFEMRALGVSPNEATYLTAMYACKRCGEKD 728
Query: 394 KMME 397
M+
Sbjct: 729 DWMQ 732
>gi|357122970|ref|XP_003563186.1| PREDICTED: pentatricopeptide repeat-containing protein At5g42310,
mitochondrial-like [Brachypodium distachyon]
Length = 675
Score = 159 bits (403), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 100/358 (27%), Positives = 176/358 (49%), Gaps = 9/358 (2%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
LI+A+ + + A +L+ G P + TAL+ A G GR AEA+F +G
Sbjct: 241 LISAFARAALPDAALDLLASAQAIGLTPRSNAVTALISALGGAGRVAEAEALFLEFFLAG 300
Query: 162 P-RPSALTYQIILKLFVEANKFKEAEEVFMTLLDE-EKSPLKPDQKMFHMMIYMYKKAGG 219
+P Y +LK +V+ K AE+V LDE + PD+ + +++ Y +AG
Sbjct: 301 EIKPRTRAYNALLKGYVKIGSLKNAEQV----LDEMSDCGVAPDEATYSLLVDAYTRAGR 356
Query: 220 YEKARKLFALMAERGVQQSTVTYNSLMSF---ETNYKEVSKIYDQMQRAGLQPDVVSYAL 276
+E AR L M GV+ S+ ++ +++ ++++ + +M +G+QPD Y +
Sbjct: 357 WESARILLKEMEADGVKPSSYVFSRILAGFRDRGDWQKAFAVLREMHASGVQPDRHFYNV 416
Query: 277 LINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDR 336
+I+ +GK A+ F M + G+ P +N L+DA G D+A +F+ MR
Sbjct: 417 MIDTFGKYNCLGHAMDAFNRMREEGIEPDVVTWNTLIDAHRKGGRHDRAMELFEEMRESN 476
Query: 337 CSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMM 396
C P +Y M++ G E +K+ G VPN+ITY TL+ Y + ++ +
Sbjct: 477 CPPGTTTYNIMINLLGEQERWVGVETMLSEMKEQGLVPNIITYTTLVDVYGRSGRFKEAI 536
Query: 397 EIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLS 454
E + M+ +G+KP+ T++ +++AY + D A+ K M + G N L++
Sbjct: 537 ECIEVMKADGLKPSPTMYHALVNAYAQRGLADHALNVVKAMRADGLEASTVVLNSLMN 594
Score = 152 bits (384), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 91/356 (25%), Positives = 175/356 (49%), Gaps = 6/356 (1%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
L+ Y K G AE+VL M+ G AP +++ L++AY R GR+++A + + M++ G
Sbjct: 312 LLKGYVKIGSLKNAEQVLDEMSDCGVAPDEATYSLLVDAYTRAGRWESARILLKEMEADG 371
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
+PS+ + IL F + +++A F L + S ++PD+ +++MI + K
Sbjct: 372 VKPSSYVFSRILAGFRDRGDWQKA---FAVLREMHASGVQPDRHFYNVMIDTFGKYNCLG 428
Query: 222 KARKLFALMAERGVQQSTVTYNSLMSFETN---YKEVSKIYDQMQRAGLQPDVVSYALLI 278
A F M E G++ VT+N+L+ + +++++M+ + P +Y ++I
Sbjct: 429 HAMDAFNRMREEGIEPDVVTWNTLIDAHRKGGRHDRAMELFEEMRESNCPPGTTTYNIMI 488
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCS 338
N G+ R + EM + G+ P Y L+D + SG +A + M+ D
Sbjct: 489 NLLGEQERWVGVETMLSEMKEQGLVPNIITYTTLVDVYGRSGRFKEAIECIEVMKADGLK 548
Query: 339 PDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEI 398
P Y +++AY + A + ++ DG + + +L+ + + + + +
Sbjct: 549 PSPTMYHALVNAYAQRGLADHALNVVKAMRADGLEASTVVLNSLMNAFGEDRRVVEAFSV 608
Query: 399 YDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLS 454
M+ N ++P+ +TT+M A + + FD V Y+EM + G PD+KA+ +L S
Sbjct: 609 LQFMKENDLRPDVITYTTLMKALIRIEQFDKVPVIYEEMITSGCAPDRKARAMLRS 664
Score = 108 bits (270), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 77/303 (25%), Positives = 138/303 (45%), Gaps = 4/303 (1%)
Query: 157 MQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKK 216
++ G P +Y +L + +A + L D +S L+PD +F +I + +
Sbjct: 188 IREHGFLPDLASYSHLLASLLNTRDPPDAAILERLLGDLRESRLEPDAPLFSDLISAFAR 247
Query: 217 AGGYEKARKLFALMAERGVQQSTVTYNSLMSF---ETNYKEVSKIYDQMQRAG-LQPDVV 272
A + A L A G+ + +L+S E ++ + AG ++P
Sbjct: 248 AALPDAALDLLASAQAIGLTPRSNAVTALISALGGAGRVAEAEALFLEFFLAGEIKPRTR 307
Query: 273 SYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCM 332
+Y L+ Y K + A V +EM D GV P Y++L+DA+ +G + AR + K M
Sbjct: 308 AYNALLKGYVKIGSLKNAEQVLDEMSDCGVAPDEATYSLLVDAYTRAGRWESARILLKEM 367
Query: 333 RRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNL 392
D P ++ +L+ + + D + A R + G P+ Y +I + K N L
Sbjct: 368 EADGVKPSSYVFSRILAGFRDRGDWQKAFAVLREMHASGVQPDRHFYNVMIDTFGKYNCL 427
Query: 393 EKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNIL 452
M+ +++MR GI+P+ + T++DA+ K D A+ ++EM PP NI+
Sbjct: 428 GHAMDAFNRMREEGIEPDVVTWNTLIDAHRKGGRHDRAMELFEEMRESNCPPGTTTYNIM 487
Query: 453 LSL 455
++L
Sbjct: 488 INL 490
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 85/361 (23%), Positives = 161/361 (44%), Gaps = 12/361 (3%)
Query: 117 KVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRM----QSSGPRPSALTYQII 172
++L+ + + G+ P + S++ L+ + R AI R+ + S P A + +
Sbjct: 183 RLLALIREHGFLPDLASYSHLLASL-LNTRDPPDAAILERLLGDLRESRLEPDAPLFSDL 241
Query: 173 LKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAE 232
+ F A A ++ L + L P +I AG +A LF
Sbjct: 242 ISAFARAALPDAALDL---LASAQAIGLTPRSNAVTALISALGGAGRVAEAEALFLEFFL 298
Query: 233 RG-VQQSTVTYNSLMSFET---NYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREE 288
G ++ T YN+L+ + K ++ D+M G+ PD +Y+LL++AY +A R E
Sbjct: 299 AGEIKPRTRAYNALLKGYVKIGSLKNAEQVLDEMSDCGVAPDEATYSLLVDAYTRAGRWE 358
Query: 289 EALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTML 348
A + +EM GV+P+ ++ +L F G +A V + M PD Y M+
Sbjct: 359 SARILLKEMEADGVKPSSYVFSRILAGFRDRGDWQKAFAVLREMHASGVQPDRHFYNVMI 418
Query: 349 SAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIK 408
+ + + A F R++++G P+V+T+ TLI + K ++ ME++++MR +
Sbjct: 419 DTFGKYNCLGHAMDAFNRMREEGIEPDVVTWNTLIDAHRKGGRHDRAMELFEEMRESNCP 478
Query: 409 PNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANEL 468
P T + +++ G+ + + EM+ G P+ L+ + + EA E
Sbjct: 479 PGTTTYNIMINLLGEQERWVGVETMLSEMKEQGLVPNIITYTTLVDVYGRSGRFKEAIEC 538
Query: 469 L 469
+
Sbjct: 539 I 539
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 106/218 (48%), Gaps = 6/218 (2%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
LI A+ K G ++A ++ M + P ++ ++ G R+ E + M+ G
Sbjct: 452 LIDAHRKGGRHDRAMELFEEMRESNCPPGTTTYNIMINLLGEQERWVGVETMLSEMKEQG 511
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
P+ +TY ++ ++ + +FKEA E + + LKP M+H ++ Y + G +
Sbjct: 512 LVPNIITYTTLVDVYGRSGRFKEAIECIEVM---KADGLKPSPTMYHALVNAYAQRGLAD 568
Query: 222 KARKLFALMAERGVQQSTVTYNSLM-SFETNYK--EVSKIYDQMQRAGLQPDVVSYALLI 278
A + M G++ STV NSLM +F + + E + M+ L+PDV++Y L+
Sbjct: 569 HALNVVKAMRADGLEASTVVLNSLMNAFGEDRRVVEAFSVLQFMKENDLRPDVITYTTLM 628
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAF 316
A + + ++ ++EEM+ +G P KA +L A
Sbjct: 629 KALIRIEQFDKVPVIYEEMITSGCAPDRKARAMLRSAL 666
>gi|225452658|ref|XP_002276556.1| PREDICTED: pentatricopeptide repeat-containing protein At5g39980,
chloroplastic [Vitis vinifera]
gi|296087770|emb|CBI35026.3| unnamed protein product [Vitis vinifera]
Length = 675
Score = 159 bits (402), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 121/492 (24%), Positives = 220/492 (44%), Gaps = 24/492 (4%)
Query: 3 MLAPRKFMQKRRK----VEVFKDAADEAGKKNWRRLMNQIEEVGSAVAVLRSERTRGQPL 58
+ +P QK R V VFKD WRRL ++ + S+ R + R L
Sbjct: 35 IFSPFNKTQKHRACFILVSVFKDV--------WRRLPDETTSLLSSSRQHRPRKQRVVHL 86
Query: 59 PKDLVLGTLVRLKQLKKWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKV 118
+ + L L + S E + S + ++ +++ ++ D+ ++ +
Sbjct: 87 DHSVDMDEL-----LASISQTSNEQELYSLMSPYKGRQLSIRFMVSLLSREPDWQRSLAL 141
Query: 119 LSFMNKKG-YAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFV 177
L ++N++ Y+PSV ++ ++ R +++ A +F M+ P TY ++ F
Sbjct: 142 LDWINEEASYSPSVFAYNVVIRNVLRAKQWELAHGLFEEMRQRALAPDRYTYSTLITHFG 201
Query: 178 EANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQ 237
+ F A L E+ + D ++ +I + +K Y KA +F+ + G+
Sbjct: 202 KEGMFDSA---LSWLQKMEQDRVSGDLVLYSNLIELSRKLCDYSKAISIFSRLKRSGISP 258
Query: 238 STVTYNSLMSF---ETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVF 294
V YNS+++ ++E + +M+ G+ PD VSY+ L++ Y + + EAL+VF
Sbjct: 259 DLVAYNSMINVFGKAKLFREARLLLPEMRAGGVMPDTVSYSTLLSMYVENGKYVEALSVF 318
Query: 295 EEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNA 354
EM + N+++D + M +A +F MR+ P I SY T+L Y A
Sbjct: 319 SEMNEVRCPLDLTTCNVMIDVYGQLDMAKEADRLFWSMRKMGIEPGIVSYNTLLRVYGEA 378
Query: 355 SDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIF 414
A FR +++ NV+TY T+IK Y K EK + +M+ GI+PN +
Sbjct: 379 ELFGEAIHLFRLMQRKDIEQNVVTYNTMIKIYGKSLEHEKATNLVQEMQNRGIEPNAITY 438
Query: 415 TTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNH 474
+TI+ + K D A + ++++ S G DQ ++ + A A LL
Sbjct: 439 STIISIWDKAGKLDRAAMLFQKLRSSGIEIDQVLYQTMIVAYERAGLVAHAKRLLHELKR 498
Query: 475 PNNEPGINGLSI 486
P+N P ++I
Sbjct: 499 PDNIPRETAITI 510
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 102/415 (24%), Positives = 200/415 (48%), Gaps = 40/415 (9%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
LI K D++KA + S + + G +P +V++ +++ +G+ ++ A + M++ G
Sbjct: 231 LIELSRKLCDYSKAISIFSRLKRSGISPDLVAYNSMINVFGKAKLFREARLLLPEMRAGG 290
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
P ++Y +L ++VE K+ EA VF + ++E + PL D ++MI +Y + +
Sbjct: 291 VMPDTVSYSTLLSMYVENGKYVEALSVF-SEMNEVRCPL--DLTTCNVMIDVYGQLDMAK 347
Query: 222 KARKLFALMAERGVQQSTVTYNSLMSFETN---YKEVSKIYDQMQRAGLQPDVVSYALLI 278
+A +LF M + G++ V+YN+L+ + E ++ MQR ++ +VV+Y +I
Sbjct: 348 EADRLFWSMRKMGIEPGIVSYNTLLRVYGEAELFGEAIHLFRLMQRKDIEQNVVTYNTMI 407
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCS 338
YGK+ E+A + +EM + G+ P Y+ ++ + +G +D+A +F+ +R
Sbjct: 408 KIYGKSLEHEKATNLVQEMQNRGIEPNAITYSTIISIWDKAGKLDRAAMLFQKLRSSGIE 467
Query: 339 PDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVP------------------------ 374
D Y TM+ AY A + A++ LK+ +P
Sbjct: 468 IDQVLYQTMIVAYERAGLVAHAKRLLHELKRPDNIPRETAITILAGAGRIEEATWVFRQA 527
Query: 375 -------NVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDF 427
++ +G +I +++ ++E++DKMR G P+ + +++A GK ++F
Sbjct: 528 FDAGEVKDITVFGCMIDLFSRNRKHTNVIEVFDKMRGAGYFPDSNVIALVLNACGKLREF 587
Query: 428 DSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGIN 482
+ A YKEME G + +LSL + + L F +++P IN
Sbjct: 588 EKADAIYKEMEEEGCVFSDEVHFQMLSLYGARGDFQMVDSL---FERLDSDPNIN 639
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/191 (21%), Positives = 95/191 (49%)
Query: 299 DAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDME 358
+A P+ AYN+++ + + A +F+ MR+ +PD +Y+T+++ + +
Sbjct: 148 EASYSPSVFAYNVVIRNVLRAKQWELAHGLFEEMRQRALAPDRYTYSTLITHFGKEGMFD 207
Query: 359 GAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIM 418
A + ++++QD +++ Y LI+ K+ + K + I+ +++ +GI P+ + +++
Sbjct: 208 SALSWLQKMEQDRVSGDLVLYSNLIELSRKLCDYSKAISIFSRLKRSGISPDLVAYNSMI 267
Query: 419 DAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNE 478
+ +GK K F A + EM + G PD + + LLS+ + EA + N
Sbjct: 268 NVFGKAKLFREARLLLPEMRAGGVMPDTVSYSTLLSMYVENGKYVEALSVFSEMNEVRCP 327
Query: 479 PGINGLSISVD 489
+ ++ +D
Sbjct: 328 LDLTTCNVMID 338
>gi|356519743|ref|XP_003528529.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g11690-like [Glycine max]
Length = 556
Score = 159 bits (402), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 100/411 (24%), Positives = 204/411 (49%), Gaps = 25/411 (6%)
Query: 89 QSWWDFNEM---------DFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALME 139
++WW FNE+ F ++I + G F K ++L+ + + G +P+VV +T L++
Sbjct: 142 KAWWIFNELKSKVVLDAYSFGIMIKGCCEAGYFVKGFRLLAMLEEFGLSPNVVIYTTLID 201
Query: 140 AYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSP 199
+ G A+ +F +M G P+ TY +++ F + +E +++ + ++S
Sbjct: 202 GCCKDGNVMLAKNLFCKMNRLGLVPNPHTYSVLMNGFFKQGLQREGFQMYENM---KRSG 258
Query: 200 LKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFET---NYKEVS 256
+ P+ ++ +I Y G +KA K+FA M E+G+ +TYN L+ + E
Sbjct: 259 IVPNAYAYNCLISEYCNDGMVDKAFKVFAEMREKGIACGVMTYNILIGGLCRGKKFGEAV 318
Query: 257 KIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAF 316
K+ ++ + GL P++V+Y +LIN + R+ + A+ +F ++ +G+ PT YN L+ +
Sbjct: 319 KLVHKVNKVGLSPNIVTYNILINGFCDVRKMDSAVRLFNQLKSSGLSPTLVTYNTLIAGY 378
Query: 317 A----ISGMVDQARTVFKCMRRDRC-SPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDG 371
+ ++G +D + + +RC +P +YT ++ A+ + E A + +++ G
Sbjct: 379 SKVENLAGALDLVKEM-----EERCIAPSKVTYTILIDAFARLNHTEKACEMHSLMEKSG 433
Query: 372 FVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAV 431
VP+V TY L+ G N+++ +++ + ++PN I+ T++ Y K A+
Sbjct: 434 LVPDVYTYSVLLHGLCVHGNMKEASKLFKSLGEMHLQPNSVIYNTMIHGYCKEGSSYRAL 493
Query: 432 VWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGIN 482
EM G P+ + + L ++ EA LLG + +P ++
Sbjct: 494 RLLNEMVQSGMVPNVASFCSTIGLLCRDEKWKEAELLLGQMINSGLKPSVS 544
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 99/382 (25%), Positives = 171/382 (44%), Gaps = 42/382 (10%)
Query: 136 ALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDE 195
++ AY A M G P + T+ +L L + +N F +A +F +E
Sbjct: 94 TVVNAYVHSHSTDQALTFLHHMIHEGHVPLSNTFNNLLCLLIRSNYFDKAWWIF----NE 149
Query: 196 EKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLM---SFETNY 252
KS + D F +MI +AG + K +L A++ E G+ + V Y +L+ + N
Sbjct: 150 LKSKVVLDAYSFGIMIKGCCEAGYFVKGFRLLAMLEEFGLSPNVVIYTTLIDGCCKDGNV 209
Query: 253 KEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNIL 312
++ +M R GL P+ +Y++L+N + K + E ++E M +G+ P AYN L
Sbjct: 210 MLAKNLFCKMNRLGLVPNPHTYSVLMNGFFKQGLQREGFQMYENMKRSGIVPNAYAYNCL 269
Query: 313 LDAFAISGMVDQARTVFKCMRRD--RC--------------------------------- 337
+ + GMVD+A VF MR C
Sbjct: 270 ISEYCNDGMVDKAFKVFAEMREKGIACGVMTYNILIGGLCRGKKFGEAVKLVHKVNKVGL 329
Query: 338 SPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMME 397
SP+I +Y +++ + + M+ A + F +LK G P ++TY TLI GY+KV NL ++
Sbjct: 330 SPNIVTYNILINGFCDVRKMDSAVRLFNQLKSSGLSPTLVTYNTLIAGYSKVENLAGALD 389
Query: 398 IYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAK 457
+ +M I P++ +T ++DA+ + + A + ME G PD ++LL
Sbjct: 390 LVKEMEERCIAPSKVTYTILIDAFARLNHTEKACEMHSLMEKSGLVPDVYTYSVLLHGLC 449
Query: 458 TADERNEANELLGNFNHPNNEP 479
EA++L + + +P
Sbjct: 450 VHGNMKEASKLFKSLGEMHLQP 471
Score = 68.9 bits (167), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 62/281 (22%), Positives = 105/281 (37%), Gaps = 37/281 (13%)
Query: 256 SKIYDQMQRAGLQPDVVS---YALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNIL 312
S + Q+ +A P Y ++NAY + ++AL M+ G P +N L
Sbjct: 71 SSLMLQLTQAHFTPCSTYTPLYDTVVNAYVHSHSTDQALTFLHHMIHEGHVPLSNTFNNL 130
Query: 313 LDAFAISGMVDQARTVFK--------------CMRRDRC--------------------S 338
L S D+A +F M + C S
Sbjct: 131 LCLLIRSNYFDKAWWIFNELKSKVVLDAYSFGIMIKGCCEAGYFVKGFRLLAMLEEFGLS 190
Query: 339 PDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEI 398
P++ YTT++ ++ A+ F ++ + G VPN TY L+ G+ K + ++
Sbjct: 191 PNVVIYTTLIDGCCKDGNVMLAKNLFCKMNRLGLVPNPHTYSVLMNGFFKQGLQREGFQM 250
Query: 399 YDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKT 458
Y+ M+ +GI PN + ++ Y + D A + EM G NIL+
Sbjct: 251 YENMKRSGIVPNAYAYNCLISEYCNDGMVDKAFKVFAEMREKGIACGVMTYNILIGGLCR 310
Query: 459 ADERNEANELLGNFNHPNNEPGINGLSISVDEEDDDDDDDE 499
+ EA +L+ N P I +I ++ D D
Sbjct: 311 GKKFGEAVKLVHKVNKVGLSPNIVTYNILINGFCDVRKMDS 351
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 42/216 (19%), Positives = 83/216 (38%), Gaps = 50/216 (23%)
Query: 289 EALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDR------------ 336
+AL +F G++ T + + +L+ SGM+ QA+++ + R
Sbjct: 21 KALLLFNTATYQGLQHTSHSISFILNHLLSSGMLPQAQSLILRLISGRIPSSLMLQLTQA 80
Query: 337 ----CSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVP------------------ 374
CS Y T+++AYV++ + A F + +G VP
Sbjct: 81 HFTPCSTYTPLYDTVVNAYVHSHSTDQALTFLHHMIHEGHVPLSNTFNNLLCLLIRSNYF 140
Query: 375 ----------------NVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIM 418
+ ++G +IKG + K + + G+ PN I+TT++
Sbjct: 141 DKAWWIFNELKSKVVLDAYSFGIMIKGCCEAGYFVKGFRLLAMLEEFGLSPNVVIYTTLI 200
Query: 419 DAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLS 454
D K+ + A + +M G P+ ++L++
Sbjct: 201 DGCCKDGNVMLAKNLFCKMNRLGLVPNPHTYSVLMN 236
>gi|225436658|ref|XP_002276327.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g28010-like [Vitis vinifera]
Length = 728
Score = 159 bits (402), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 113/427 (26%), Positives = 201/427 (47%), Gaps = 12/427 (2%)
Query: 67 LVRLKQLKKWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKG 126
L RL Q K+ N V + I + + + LI K G A +L+ M +KG
Sbjct: 294 LCRLGQWKEANTVLNAMAEHGIHP----DVVTYTGLIDGLCKDGRATHAMDLLNLMVEKG 349
Query: 127 YAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAE 186
PS V++ L+ + G +A I R M G + +TY ++K + K EA
Sbjct: 350 EEPSNVTYNVLLSGLCKEGLVIDAFKILRMMIEKGKKADVVTYNTLMKGLCDKGKVDEAL 409
Query: 187 EVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLM 246
++F ++ D E L+P+ F+M+I K G KA K+ M ++G + VTYN L+
Sbjct: 410 KLFNSMFDNENC-LEPNVFTFNMLIGGLCKEGRLTKAVKIHRKMVKKGSCGNLVTYNMLL 468
Query: 247 SF---ETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVR 303
KE +++ Q+ G P+ +Y++LI+ + K R A +F EM G+
Sbjct: 469 GGCLKAGKIKEAMELWKQVLDLGFVPNSFTYSILIDGFCKMRMLNIAKGLFCEMRTHGLN 528
Query: 304 PTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKF 363
P YN L+ + G ++QA+++F+ M C PDI S+ TM+ + A D + ++
Sbjct: 529 PALFDYNTLMASLCKEGSLEQAKSLFQEMGNANCEPDIISFNTMIDGTLKAGDFQFVKEL 588
Query: 364 FRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGK 423
++ + G P+ +T+ TLI +K+ L++ ++M +G P+ ++ +++
Sbjct: 589 QMKMVEMGLRPDALTFSTLINRLSKLGELDEAKSALERMVASGFTPDALVYDSLLKGLSS 648
Query: 424 NKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGING 483
D + +M + G D+K + +L+ + + + ELL F +E G
Sbjct: 649 KGDTTEIINLLHQMAAKGTVLDRKIVSTILTCLCHSIQEVDVMELLPTFFQGTSE----G 704
Query: 484 LSISVDE 490
SIS +E
Sbjct: 705 ASISCNE 711
Score = 141 bits (356), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 95/380 (25%), Positives = 187/380 (49%), Gaps = 8/380 (2%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + + L+ + G + +A VL+ M + G P VV++T L++ + GR +A +
Sbjct: 283 NVVTYSCLVHGLCRLGQWKEANTVLNAMAEHGIHPDVVTYTGLIDGLCKDGRATHAMDLL 342
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
M G PS +TY ++L + +A ++ ++++ K K D ++ ++
Sbjct: 343 NLMVEKGEEPSNVTYNVLLSGLCKEGLVIDAFKILRMMIEKGK---KADVVTYNTLMKGL 399
Query: 215 KKAGGYEKARKLFALM--AERGVQQSTVTYNSL---MSFETNYKEVSKIYDQMQRAGLQP 269
G ++A KLF M E ++ + T+N L + E + KI+ +M + G
Sbjct: 400 CDKGKVDEALKLFNSMFDNENCLEPNVFTFNMLIGGLCKEGRLTKAVKIHRKMVKKGSCG 459
Query: 270 DVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVF 329
++V+Y +L+ KA + +EA+ +++++LD G P Y+IL+D F M++ A+ +F
Sbjct: 460 NLVTYNMLLGGCLKAGKIKEAMELWKQVLDLGFVPNSFTYSILIDGFCKMRMLNIAKGLF 519
Query: 330 KCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKV 389
MR +P + Y T++++ +E A+ F+ + P++I++ T+I G K
Sbjct: 520 CEMRTHGLNPALFDYNTLMASLCKEGSLEQAKSLFQEMGNANCEPDIISFNTMIDGTLKA 579
Query: 390 NNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAK 449
+ + + E+ KM G++P+ F+T+++ K + D A + M + GF PD
Sbjct: 580 GDFQFVKELQMKMVEMGLRPDALTFSTLINRLSKLGELDEAKSALERMVASGFTPDALVY 639
Query: 450 NILLSLAKTADERNEANELL 469
+ LL + + E LL
Sbjct: 640 DSLLKGLSSKGDTTEIINLL 659
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 85/377 (22%), Positives = 162/377 (42%), Gaps = 45/377 (11%)
Query: 99 FLMLITAYG--KQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRR 156
F+M I G + G +A ++ M +K +P +VS+ L+ + + K A +
Sbjct: 145 FIMNIVLKGLCRNGGVFEAMGLIREMGRKSVSPDIVSYNTLINGLCKAKKLKEAVGLLLE 204
Query: 157 MQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKK 216
M+++G P+++T ++ + + EA E+ + +K D ++ +I +
Sbjct: 205 MEAAGCFPNSVTCTTLMDGLCKDGRMDEAMELLEAM---KKKGFDADVVLYGTLISGFCN 261
Query: 217 AGGYEKARKLFALMAERGVQQSTVTYNSL---MSFETNYKEVSKIYDQMQRAGLQPDVVS 273
G ++ ++LF M +G+ + VTY+ L + +KE + + + M G+ PDVV+
Sbjct: 262 NGNLDRGKELFDEMLGKGISANVVTYSCLVHGLCRLGQWKEANTVLNAMAEHGIHPDVVT 321
Query: 274 YALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMR 333
Y LI+ K R A+ + M++ G P++ YN+LL G+V A
Sbjct: 322 YTGLIDGLCKDGRATHAMDLLNLMVEKGEEPSNVTYNVLLSGLCKEGLVIDAF------- 374
Query: 334 RDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLE 393
K R + + G +V+TY TL+KG ++
Sbjct: 375 ----------------------------KILRMMIEKGKKADVVTYNTLMKGLCDKGKVD 406
Query: 394 KMMEIYDKM--RVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNI 451
+ +++++ M N ++PN F ++ K AV +++M G + N+
Sbjct: 407 EALKLFNSMFDNENCLEPNVFTFNMLIGGLCKEGRLTKAVKIHRKMVKKGSCGNLVTYNM 466
Query: 452 LLSLAKTADERNEANEL 468
LL A + EA EL
Sbjct: 467 LLGGCLKAGKIKEAMEL 483
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/253 (23%), Positives = 107/253 (42%), Gaps = 3/253 (1%)
Query: 220 YEKARKLFALMAERGVQQSTVTYNSL---MSFETNYKEVSKIYDQMQRAGLQPDVVSYAL 276
+ +A LF + + S T N L ++ NY +Y +M + P S +
Sbjct: 55 FTEAVSLFHSALDFNLLPSWATCNFLVDALARSRNYGLAFSVYRRMTHVDVLPSFGSLSA 114
Query: 277 LINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDR 336
LI + A++ + V +L G NI+L +G V +A + + M R
Sbjct: 115 LIECFADAQKPQLGFGVVGLVLKRGFTVNVFIMNIVLKGLCRNGGVFEAMGLIREMGRKS 174
Query: 337 CSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMM 396
SPDI SY T+++ A ++ A ++ G PN +T TL+ G K +++ M
Sbjct: 175 VSPDIVSYNTLINGLCKAKKLKEAVGLLLEMEAAGCFPNSVTCTTLMDGLCKDGRMDEAM 234
Query: 397 EIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLA 456
E+ + M+ G + ++ T++ + N + D + EM G + + L+
Sbjct: 235 ELLEAMKKKGFDADVVLYGTLISGFCNNGNLDRGKELFDEMLGKGISANVVTYSCLVHGL 294
Query: 457 KTADERNEANELL 469
+ EAN +L
Sbjct: 295 CRLGQWKEANTVL 307
>gi|168002263|ref|XP_001753833.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162694809|gb|EDQ81155.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 779
Score = 159 bits (402), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 97/397 (24%), Positives = 189/397 (47%), Gaps = 7/397 (1%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
L++A +G +A V MN+ G P +++ AL++ YG+ R++ + R M+ +G
Sbjct: 186 LLSACSSRGLVEEAGMVFRTMNEAGVVPDSITYNALVDIYGQADRHEGVGELLREMEQAG 245
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
P + Y I+++ + A K++ A ++F + +++ PD F ++ Y K G Y+
Sbjct: 246 NAPDVVAYNILIEAYGRAGKYRAAAKMFKQM---QEAGCTPDVVTFSTLLEAYGKHGCYD 302
Query: 222 KARKLFALMAERGVQQSTVTYNSLMSFETN---YKEVSKIYDQMQRAGLQPDVVSYALLI 278
+ R LF M ERG + TYN+L+ ++E ++ + G++PD+ +YA L+
Sbjct: 303 EVRLLFTDMKERGTEPDVNTYNTLIQVFGQGGFFQESINLFWDLLDGGVEPDMSTYAGLL 362
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCS 338
+ GK + A + ML + V PT + L+ A+ + + +A F M+ C
Sbjct: 363 YSCGKGGLHKAAKKIHRHMLQSYVTPTTDGFTGLITAYGNAALYSEATYAFNSMKESGCK 422
Query: 339 PDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEI 398
PD+ +Y ++ A+ A + + +G +V TY +LI+ + + + +E
Sbjct: 423 PDLETYNALIGAHAGGGLYCEAGSAYLTMIDEGISADVSTYNSLIEAFGRGGLFDDAIEF 482
Query: 399 YDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKT 458
M PN+ + +M Y FD A + +++ G P + +LLS+
Sbjct: 483 SRDMEEARCSPNRHTYEALMGVYCTAGLFDEAKAQFLDLQVGGELPSVDSYCLLLSVCAR 542
Query: 459 ADERNEANELLGNFNHPNNEPGINGLSISVDEEDDDD 495
+ ++A+++L P N P I G+ + + + DD
Sbjct: 543 RNRWDDASKVLEEMLEP-NMPSIYGVVGGILKGEMDD 578
Score = 156 bits (395), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 98/387 (25%), Positives = 181/387 (46%), Gaps = 5/387 (1%)
Query: 70 LKQLKKWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAP 129
Q W + ++++ W NE + ++I G++G +KA ++ M
Sbjct: 48 FAQRSDWQKALRLFKYMQRHQWCKPNEHVYTIMIGIMGREGMLDKASELFEDMPLNDVEW 107
Query: 130 SVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVF 189
+V S TAL+ AYGR G+++ + + RM+ P+ +TY ++ + E E +
Sbjct: 108 NVYSFTALINAYGRNGQHEASLHLLARMKREKVTPNLITYNTVINACAKGGL--EWEGLL 165
Query: 190 MTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSF- 248
++PD ++ ++ G E+A +F M E GV ++TYN+L+
Sbjct: 166 GLFAQMRHEGIQPDIITYNTLLSACSSRGLVEEAGMVFRTMNEAGVVPDSITYNALVDIY 225
Query: 249 --ETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTH 306
++ V ++ +M++AG PDVV+Y +LI AYG+A + A +F++M +AG P
Sbjct: 226 GQADRHEGVGELLREMEQAGNAPDVVAYNILIEAYGRAGKYRAAAKMFKQMQEAGCTPDV 285
Query: 307 KAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRR 366
++ LL+A+ G D+ R +F M+ PD+ +Y T++ + + + F
Sbjct: 286 VTFSTLLEAYGKHGCYDEVRLLFTDMKERGTEPDVNTYNTLIQVFGQGGFFQESINLFWD 345
Query: 367 LKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKD 426
L G P++ TY L+ K + +I+ M + + P FT ++ AYG
Sbjct: 346 LLDGGVEPDMSTYAGLLYSCGKGGLHKAAKKIHRHMLQSYVTPTTDGFTGLITAYGNAAL 405
Query: 427 FDSAVVWYKEMESCGFPPDQKAKNILL 453
+ A + M+ G PD + N L+
Sbjct: 406 YSEATYAFNSMKESGCKPDLETYNALI 432
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 102/412 (24%), Positives = 190/412 (46%), Gaps = 42/412 (10%)
Query: 93 DFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGG-RYKNAE 151
++N F LI AYG+ G + +L+ M ++ P+++++ ++ A +GG ++
Sbjct: 106 EWNVYSFTALINAYGRNGQHEASLHLLARMKREKVTPNLITYNTVINACAKGGLEWEGLL 165
Query: 152 AIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMI 211
+F +M+ G +P +TY +L +EA VF T+ ++ + PD ++ ++
Sbjct: 166 GLFAQMRHEGIQPDIITYNTLLSACSSRGLVEEAGMVFRTM---NEAGVVPDSITYNALV 222
Query: 212 YMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSF---ETNYKEVSKIYDQMQRAGLQ 268
+Y +A +E +L M + G V YN L+ Y+ +K++ QMQ AG
Sbjct: 223 DIYGQADRHEGVGELLREMEQAGNAPDVVAYNILIEAYGRAGKYRAAAKMFKQMQEAGCT 282
Query: 269 PDVVSYALLINAYGKA---------------RREE--------------------EALAV 293
PDVV+++ L+ AYGK R E E++ +
Sbjct: 283 PDVVTFSTLLEAYGKHGCYDEVRLLFTDMKERGTEPDVNTYNTLIQVFGQGGFFQESINL 342
Query: 294 FEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVN 353
F ++LD GV P Y LL + G+ A+ + + M + +P +T +++AY N
Sbjct: 343 FWDLLDGGVEPDMSTYAGLLYSCGKGGLHKAAKKIHRHMLQSYVTPTTDGFTGLITAYGN 402
Query: 354 ASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTI 413
A+ A F +K+ G P++ TY LI +A + Y M GI + +
Sbjct: 403 AALYSEATYAFNSMKESGCKPDLETYNALIGAHAGGGLYCEAGSAYLTMIDEGISADVST 462
Query: 414 FTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEA 465
+ ++++A+G+ FD A+ + ++ME P++ L+ + TA +EA
Sbjct: 463 YNSLIEAFGRGGLFDDAIEFSRDMEEARCSPNRHTYEALMGVYCTAGLFDEA 514
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 75/291 (25%), Positives = 152/291 (52%), Gaps = 6/291 (2%)
Query: 169 YQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFA 228
+ +I + F + + +++A +F + + KP++ ++ +MI + + G +KA +LF
Sbjct: 41 FSLIFREFAQRSDWQKALRLFKYM--QRHQWCKPNEHVYTIMIGIMGREGMLDKASELFE 98
Query: 229 LMAERGVQQSTVTYNSLM-SFETNYKEVSKIY--DQMQRAGLQPDVVSYALLINAYGKAR 285
M V+ + ++ +L+ ++ N + + ++ +M+R + P++++Y +INA K
Sbjct: 99 DMPLNDVEWNVYSFTALINAYGRNGQHEASLHLLARMKREKVTPNLITYNTVINACAKGG 158
Query: 286 REEEAL-AVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSY 344
E E L +F +M G++P YN LL A + G+V++A VF+ M PD +Y
Sbjct: 159 LEWEGLLGLFAQMRHEGIQPDIITYNTLLSACSSRGLVEEAGMVFRTMNEAGVVPDSITY 218
Query: 345 TTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRV 404
++ Y A EG + R ++Q G P+V+ Y LI+ Y + +++ +M+
Sbjct: 219 NALVDIYGQADRHEGVGELLREMEQAGNAPDVVAYNILIEAYGRAGKYRAAAKMFKQMQE 278
Query: 405 NGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSL 455
G P+ F+T+++AYGK+ +D + + +M+ G PD N L+ +
Sbjct: 279 AGCTPDVVTFSTLLEAYGKHGCYDEVRLLFTDMKERGTEPDVNTYNTLIQV 329
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 73/281 (25%), Positives = 132/281 (46%), Gaps = 5/281 (1%)
Query: 207 FHMMIYMYKKAGGYEKARKLFALMA-ERGVQQSTVTYN---SLMSFETNYKEVSKIYDQM 262
F ++ + + ++KA +LF M + + + Y +M E + S++++ M
Sbjct: 41 FSLIFREFAQRSDWQKALRLFKYMQRHQWCKPNEHVYTIMIGIMGREGMLDKASELFEDM 100
Query: 263 QRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGM- 321
++ +V S+ LINAYG+ + E +L + M V P YN +++A A G+
Sbjct: 101 PLNDVEWNVYSFTALINAYGRNGQHEASLHLLARMKREKVTPNLITYNTVINACAKGGLE 160
Query: 322 VDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGT 381
+ +F MR + PDI +Y T+LSA + +E A FR + + G VP+ ITY
Sbjct: 161 WEGLLGLFAQMRHEGIQPDIITYNTLLSACSSRGLVEEAGMVFRTMNEAGVVPDSITYNA 220
Query: 382 LIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCG 441
L+ Y + + E + E+ +M G P+ + +++AYG+ + +A +K+M+ G
Sbjct: 221 LVDIYGQADRHEGVGELLREMEQAGNAPDVVAYNILIEAYGRAGKYRAAAKMFKQMQEAG 280
Query: 442 FPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGIN 482
PD + LL +E L + EP +N
Sbjct: 281 CTPDVVTFSTLLEAYGKHGCYDEVRLLFTDMKERGTEPDVN 321
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 102/218 (46%), Gaps = 2/218 (0%)
Query: 274 YALLINAYGKARREEEALAVFEEM-LDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCM 332
++L+ + + ++AL +F+ M +P Y I++ GM+D+A +F+ M
Sbjct: 41 FSLIFREFAQRSDWQKALRLFKYMQRHQWCKPNEHVYTIMIGIMGREGMLDKASELFEDM 100
Query: 333 RRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVN-N 391
+ ++ S+T +++AY E + R+K++ PN+ITY T+I AK
Sbjct: 101 PLNDVEWNVYSFTALINAYGRNGQHEASLHLLARMKREKVTPNLITYNTVINACAKGGLE 160
Query: 392 LEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNI 451
E ++ ++ +MR GI+P+ + T++ A + A + ++ M G PD N
Sbjct: 161 WEGLLGLFAQMRHEGIQPDIITYNTLLSACSSRGLVEEAGMVFRTMNEAGVVPDSITYNA 220
Query: 452 LLSLAKTADERNEANELLGNFNHPNNEPGINGLSISVD 489
L+ + AD ELL N P + +I ++
Sbjct: 221 LVDIYGQADRHEGVGELLREMEQAGNAPDVVAYNILIE 258
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/244 (24%), Positives = 109/244 (44%), Gaps = 15/244 (6%)
Query: 99 FLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQ 158
F LITAYG +++A + M + G P + ++ AL+ A+ GG Y A + + M
Sbjct: 393 FTGLITAYGNAALYSEATYAFNSMKESGCKPDLETYNALIGAHAGGGLYCEAGSAYLTMI 452
Query: 159 SSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAG 218
G TY +++ F F +A E D E++ P++ + ++ +Y AG
Sbjct: 453 DEGISADVSTYNSLIEAFGRGGLFDDAIEFSR---DMEEARCSPNRHTYEALMGVYCTAG 509
Query: 219 GYEKARKLFALMAERGVQQSTVTYNSLMSF---ETNYKEVSKIYDQMQRAGLQPDVVSYA 275
+++A+ F + G S +Y L+S + + SK+ ++M L+P++ S
Sbjct: 510 LFDEAKAQFLDLQVGGELPSVDSYCLLLSVCARRNRWDDASKVLEEM----LEPNMPSIY 565
Query: 276 LLINAYGKARRE-----EEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFK 330
++ K + + F+ + GV + YN LL+A G ++A VF
Sbjct: 566 GVVGGILKGEMDDGTNWQRVEYAFDGLKVDGVGSNLRFYNALLEALWCLGQRERACRVFA 625
Query: 331 CMRR 334
R+
Sbjct: 626 EARK 629
>gi|162460542|ref|NP_001105869.1| pentatricopeptide repeat protein [Zea mays]
gi|95931777|gb|ABF57644.1| pentatricopeptide repeat protein [Zea mays]
Length = 886
Score = 159 bits (402), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 98/395 (24%), Positives = 189/395 (47%), Gaps = 43/395 (10%)
Query: 98 DFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRM 157
+F +++ Y K+GD + A M +G P+ T+L+ AY G + A + M
Sbjct: 253 EFGLMVVYYAKRGDKHHARATFENMRARGIEPNAFVFTSLVHAYAVAGDMRGALSCVEEM 312
Query: 158 QSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPL-KPDQKMFHMMIYMYKK 216
+S G + +TY I++ + + N + A+ +F E K+ L + ++ +I+ + +
Sbjct: 313 KSEGIEMTVVTYSILISGYGKTNDAQSADNLF----KEAKTKLDNLNGIIYSNIIHAHCQ 368
Query: 217 AGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSK---IYDQMQRAGLQPDVVS 273
+G ++A +L M E G+ Y+S+M T ++ K ++++++ G +P ++S
Sbjct: 369 SGNMDRAEELVREMEEDGIDAPIDVYHSMMHGYTVVQDEKKCLIVFERLKECGFKPTIIS 428
Query: 274 YALLINAYGKARREEEALAV-----------------------------------FEEML 298
Y LIN Y K + +A+A+ FE+M+
Sbjct: 429 YGCLINLYVKVGKVPKAIAISKEMESHGIKHNNKTYSMLINGFIHLHDFANAFSIFEDMI 488
Query: 299 DAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDME 358
+G++P YN+L++AF G +D+A +F+ M+++R P ++ ++ + A DM+
Sbjct: 489 KSGLQPDRAIYNLLVEAFCKMGNMDRAIRIFERMQKERMQPSNRTFRPIIEGFAVAGDMK 548
Query: 359 GAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIM 418
A +++ G P V+TY LI G + + +EK + + DKM + GI PN+ +T IM
Sbjct: 549 RAFDTLDLMRRSGCAPTVMTYNALIHGLVRKHQVEKAVSVLDKMSIAGIAPNEHTYTIIM 608
Query: 419 DAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILL 453
Y + D A ++ +++ G D LL
Sbjct: 609 RGYAASGDIGKAFEYFTKIKESGLKLDVYIYETLL 643
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 92/391 (23%), Positives = 186/391 (47%), Gaps = 41/391 (10%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
++ Y D K V + + G+ P+++S+ L+ Y + G+ A AI + M+S G
Sbjct: 397 MMHGYTVVQDEKKCLIVFERLKECGFKPTIISYGCLINLYVKVGKVPKAIAISKEMESHG 456
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
+ + TY +++ F+ + F A +F ++ KS L+PD+ ++++++ + K G +
Sbjct: 457 IKHNNKTYSMLINGFIHLHDFANAFSIFEDMI---KSGLQPDRAIYNLLVEAFCKMGNMD 513
Query: 222 KARKLFALMAERGVQQSTVTYNSLM---SFETNYKEVSKIYDQMQRAGLQPDVVSYALLI 278
+A ++F M + +Q S T+ ++ + + K D M+R+G P V++Y LI
Sbjct: 514 RAIRIFERMQKERMQPSNRTFRPIIEGFAVAGDMKRAFDTLDLMRRSGCAPTVMTYNALI 573
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCS 338
+ + + E+A++V ++M AG+ P Y I++ +A SG + +A F ++
Sbjct: 574 HGLVRKHQVEKAVSVLDKMSIAGIAPNEHTYTIIMRGYAASGDIGKAFEYFTKIKESGLK 633
Query: 339 PDICSYTTMLSAYVNASDMEG-----------------------------------AEKF 363
D+ Y T+L A + M+ A
Sbjct: 634 LDVYIYETLLRACCKSGRMQSALAVTREMSFQKIPRNTFIYNILIDGWARRGDVWEAADL 693
Query: 364 FRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGK 423
+++K+DG PN+ T+ + I K ++++ + +M G+KPN FTT++ + +
Sbjct: 694 LKQMKEDGIPPNIHTFTSYINACCKAGDMQRAENVIQEMADVGLKPNVKTFTTLIKGWAR 753
Query: 424 NKDFDSAVVWYKEMESCGFPPDQKAKNILLS 454
D A+ ++EM+S G PD+ A + L++
Sbjct: 754 VSLPDRALKCFEEMKSAGLKPDEAAYHCLVT 784
Score = 141 bits (356), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 101/362 (27%), Positives = 180/362 (49%), Gaps = 10/362 (2%)
Query: 62 LVLGTLVRLKQLKKWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSF 121
++ V++ ++ K +S+ +E I+ N + MLI + DF A +
Sbjct: 431 CLINLYVKVGKVPKAIAISKEMESHGIKH----NNKTYSMLINGFIHLHDFANAFSIFED 486
Query: 122 MNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANK 181
M K G P + L+EA+ + G A IF RMQ +PS T++ I++ F A
Sbjct: 487 MIKSGLQPDRAIYNLLVEAFCKMGNMDRAIRIFERMQKERMQPSNRTFRPIIEGFAVAGD 546
Query: 182 FKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVT 241
K A F TL +S P ++ +I+ + EKA + M+ G+ + T
Sbjct: 547 MKRA---FDTLDLMRRSGCAPTVMTYNALIHGLVRKHQVEKAVSVLDKMSIAGIAPNEHT 603
Query: 242 YNSLMSFETNYKEVSKIYD---QMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEML 298
Y +M ++ K ++ +++ +GL+ DV Y L+ A K+ R + ALAV EM
Sbjct: 604 YTIIMRGYAASGDIGKAFEYFTKIKESGLKLDVYIYETLLRACCKSGRMQSALAVTREMS 663
Query: 299 DAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDME 358
+ YNIL+D +A G V +A + K M+ D P+I ++T+ ++A A DM+
Sbjct: 664 FQKIPRNTFIYNILIDGWARRGDVWEAADLLKQMKEDGIPPNIHTFTSYINACCKAGDMQ 723
Query: 359 GAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIM 418
AE + + G PNV T+ TLIKG+A+V+ ++ ++ +++M+ G+KP++ + ++
Sbjct: 724 RAENVIQEMADVGLKPNVKTFTTLIKGWARVSLPDRALKCFEEMKSAGLKPDEAAYHCLV 783
Query: 419 DA 420
+
Sbjct: 784 TS 785
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 74/261 (28%), Positives = 129/261 (49%), Gaps = 4/261 (1%)
Query: 196 EKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLM---SFETNY 252
E+ P KP ++ F +M+ Y K G AR F M RG++ + + SL+ + +
Sbjct: 244 ERIP-KPSRREFGLMVVYYAKRGDKHHARATFENMRARGIEPNAFVFTSLVHAYAVAGDM 302
Query: 253 KEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNIL 312
+ ++M+ G++ VV+Y++LI+ YGK + A +F+E Y+ +
Sbjct: 303 RGALSCVEEMKSEGIEMTVVTYSILISGYGKTNDAQSADNLFKEAKTKLDNLNGIIYSNI 362
Query: 313 LDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGF 372
+ A SG +D+A + + M D I Y +M+ Y D + F RLK+ GF
Sbjct: 363 IHAHCQSGNMDRAEELVREMEEDGIDAPIDVYHSMMHGYTVVQDEKKCLIVFERLKECGF 422
Query: 373 VPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVV 432
P +I+YG LI Y KV + K + I +M +GIK N ++ +++ + DF +A
Sbjct: 423 KPTIISYGCLINLYVKVGKVPKAIAISKEMESHGIKHNNKTYSMLINGFIHLHDFANAFS 482
Query: 433 WYKEMESCGFPPDQKAKNILL 453
+++M G PD+ N+L+
Sbjct: 483 IFEDMIKSGLQPDRAIYNLLV 503
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 68/266 (25%), Positives = 135/266 (50%), Gaps = 7/266 (2%)
Query: 99 FLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQ 158
F +I + GD +A L M + G AP+V+++ AL+ R + + A ++ +M
Sbjct: 534 FRPIIEGFAVAGDMKRAFDTLDLMRRSGCAPTVMTYNALIHGLVRKHQVEKAVSVLDKMS 593
Query: 159 SSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAG 218
+G P+ TY II++ + + +A E F + ++S LK D ++ ++ K+G
Sbjct: 594 IAGIAPNEHTYTIIMRGYAASGDIGKAFEYFTKI---KESGLKLDVYIYETLLRACCKSG 650
Query: 219 GYEKARKLFALMAERGVQQSTVTYNSLM---SFETNYKEVSKIYDQMQRAGLQPDVVSYA 275
+ A + M+ + + ++T YN L+ + + E + + QM+ G+ P++ ++
Sbjct: 651 RMQSALAVTREMSFQKIPRNTFIYNILIDGWARRGDVWEAADLLKQMKEDGIPPNIHTFT 710
Query: 276 LLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRD 335
INA KA + A V +EM D G++P K + L+ +A + D+A F+ M+
Sbjct: 711 SYINACCKAGDMQRAENVIQEMADVGLKPNVKTFTTLIKGWARVSLPDRALKCFEEMKSA 770
Query: 336 RCSPDICSYTTMLSAYVN-ASDMEGA 360
PD +Y ++++ ++ A+ MEG+
Sbjct: 771 GLKPDEAAYHCLVTSLLSRATVMEGS 796
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/188 (22%), Positives = 90/188 (47%)
Query: 268 QPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQART 327
+P + L++ Y K + A A FE M G+ P + L+ A+A++G + A +
Sbjct: 248 KPSRREFGLMVVYYAKRGDKHHARATFENMRARGIEPNAFVFTSLVHAYAVAGDMRGALS 307
Query: 328 VFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYA 387
+ M+ + + +Y+ ++S Y +D + A+ F+ K N I Y +I +
Sbjct: 308 CVEEMKSEGIEMTVVTYSILISGYGKTNDAQSADNLFKEAKTKLDNLNGIIYSNIIHAHC 367
Query: 388 KVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQK 447
+ N+++ E+ +M +GI ++ ++M Y +D ++ ++ ++ CGF P
Sbjct: 368 QSGNMDRAEELVREMEEDGIDAPIDVYHSMMHGYTVVQDEKKCLIVFERLKECGFKPTII 427
Query: 448 AKNILLSL 455
+ L++L
Sbjct: 428 SYGCLINL 435
Score = 47.4 bits (111), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 72/162 (44%), Gaps = 17/162 (10%)
Query: 319 SGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVIT 378
+G+V +A + + R D C + +L + D + F R+ + P+
Sbjct: 204 AGVVREASSPWHKGREDACR----EFRRVLES--RPEDWQAVVSAFERIPK----PSRRE 253
Query: 379 YGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEME 438
+G ++ YAK + ++ MR GI+PN +FT+++ AY D A+ +EM+
Sbjct: 254 FGLMVVYYAKRGDKHHARATFENMRARGIEPNAFVFTSLVHAYAVAGDMRGALSCVEEMK 313
Query: 439 SCGFPPDQKAKNILLS-LAKTADERN------EANELLGNFN 473
S G +IL+S KT D ++ EA L N N
Sbjct: 314 SEGIEMTVVTYSILISGYGKTNDAQSADNLFKEAKTKLDNLN 355
>gi|225457182|ref|XP_002280557.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74850,
chloroplastic [Vitis vinifera]
Length = 869
Score = 159 bits (402), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 102/399 (25%), Positives = 186/399 (46%), Gaps = 9/399 (2%)
Query: 76 WNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHT 135
W + ++++ Q W NE + ++I G++G K +++ M G APSV S T
Sbjct: 126 WQRSLRLFKYMQRQIWCKPNEHIYTIMIGVLGREGLLEKCQEIFDEMPSHGVAPSVFSFT 185
Query: 136 ALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDE 195
AL+ AYGR G+YK++ + RM+ PS LTY ++ + EE+
Sbjct: 186 ALINAYGRNGQYKSSLELLDRMKKERVSPSILTYNTVINSCARGG--LDWEELLGLFAQM 243
Query: 196 EKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFET----- 250
++ D ++ ++ + G ++A +F M E G+ TY+ L+ ET
Sbjct: 244 RHEGIQADIVTYNTLLSACARRGLGDEAEMVFRTMNEGGILPDITTYSYLV--ETFGKLN 301
Query: 251 NYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYN 310
++VS++ +M+ G PD+ SY +L+ A+ ++ +EA+ VF +M AG P Y+
Sbjct: 302 RLEKVSELLKEMESGGSFPDITSYNVLLEAHAQSGSIKEAMGVFRQMQGAGCVPNAATYS 361
Query: 311 ILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQD 370
ILL+ + G D R +F M+ P+ +Y +++ + + F + ++
Sbjct: 362 ILLNLYGRHGRYDDVRDLFLEMKVSNTEPNAATYNILINVFGEGGYFKEVVTLFHDMVEE 421
Query: 371 GFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSA 430
PN+ TY LI K E +I M G+ P+ +T +++AYG+ ++ A
Sbjct: 422 NVEPNMETYEGLIFACGKGGLHEDAKKILLHMNEKGVVPSSKAYTGVIEAYGQAALYEEA 481
Query: 431 VVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELL 469
+V + M G P + N L+ + E+ +L
Sbjct: 482 LVAFNTMNEVGSKPTVETYNSLIQMFAKGGLYKESEAIL 520
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 107/409 (26%), Positives = 201/409 (49%), Gaps = 13/409 (3%)
Query: 66 TLVRLKQLKKWNVVSEVLEWLRIQSWWDFNEM-DFLMLITAYGKQGDFNKAEKVLSFMNK 124
T +L +L+K VSE+L+ ++S F ++ + +L+ A+ + G +A V M
Sbjct: 296 TFGKLNRLEK---VSELLK--EMESGGSFPDITSYNVLLEAHAQSGSIKEAMGVFRQMQG 350
Query: 125 KGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKE 184
G P+ +++ L+ YGR GRY + +F M+ S P+A TY I++ +F E FKE
Sbjct: 351 AGCVPNAATYSILLNLYGRHGRYDDVRDLFLEMKVSNTEPNAATYNILINVFGEGGYFKE 410
Query: 185 AEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNS 244
+F +++E ++P+ + + +I+ K G +E A+K+ M E+GV S+ Y
Sbjct: 411 VVTLFHDMVEEN---VEPNMETYEGLIFACGKGGLHEDAKKILLHMNEKGVVPSSKAYTG 467
Query: 245 LMSFETN---YKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAG 301
++ Y+E ++ M G +P V +Y LI + K +E+ A+ +M +G
Sbjct: 468 VIEAYGQAALYEEALVAFNTMNEVGSKPTVETYNSLIQMFAKGGLYKESEAILLKMGQSG 527
Query: 302 VRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAE 361
V +N +++AF G ++A + M + RC PD + +LS Y A +E +E
Sbjct: 528 VARNRDTFNGVIEAFRQGGQFEEAIKAYVEMEKARCDPDEQTLEAVLSVYCFAGLVEESE 587
Query: 362 KFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKP-NQTIFTTIMDA 420
+ F +K G +P+V+ Y ++ YAK + + ++ D+M N + +Q I I
Sbjct: 588 EQFGEIKALGILPSVMCYCMMLAVYAKADRWDDAHQLLDEMFTNRVSNIHQVIGQMIRGD 647
Query: 421 YGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELL 469
Y + ++ +++++S G + N LL ++ A +L
Sbjct: 648 YDDDSNWQMVEYVFEKLKSEGCSLGVRFYNTLLEALWWLGQKERATRVL 696
Score = 139 bits (349), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 99/412 (24%), Positives = 190/412 (46%), Gaps = 42/412 (10%)
Query: 98 DFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGG------------ 145
F LI AYG+ G + + ++L M K+ +PS++++ ++ + RGG
Sbjct: 183 SFTALINAYGRNGQYKSSLELLDRMKKERVSPSILTYNTVINSCARGGLDWEELLGLFAQ 242
Query: 146 -RYKN-----------------------AEAIFRRMQSSGPRPSALTYQIILKLFVEANK 181
R++ AE +FR M G P TY +++ F + N+
Sbjct: 243 MRHEGIQADIVTYNTLLSACARRGLGDEAEMVFRTMNEGGILPDITTYSYLVETFGKLNR 302
Query: 182 FKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVT 241
++ E+ L + E PD +++++ + ++G ++A +F M G + T
Sbjct: 303 LEKVSEL---LKEMESGGSFPDITSYNVLLEAHAQSGSIKEAMGVFRQMQGAGCVPNAAT 359
Query: 242 YNSLMSF---ETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEML 298
Y+ L++ Y +V ++ +M+ + +P+ +Y +LIN +G+ +E + +F +M+
Sbjct: 360 YSILLNLYGRHGRYDDVRDLFLEMKVSNTEPNAATYNILINVFGEGGYFKEVVTLFHDMV 419
Query: 299 DAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDME 358
+ V P + Y L+ A G+ + A+ + M P +YT ++ AY A+ E
Sbjct: 420 EENVEPNMETYEGLIFACGKGGLHEDAKKILLHMNEKGVVPSSKAYTGVIEAYGQAALYE 479
Query: 359 GAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIM 418
A F + + G P V TY +LI+ +AK ++ I KM +G+ N+ F ++
Sbjct: 480 EALVAFNTMNEVGSKPTVETYNSLIQMFAKGGLYKESEAILLKMGQSGVARNRDTFNGVI 539
Query: 419 DAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLG 470
+A+ + F+ A+ Y EME PD++ +LS+ A E+ E G
Sbjct: 540 EAFRQGGQFEEAIKAYVEMEKARCDPDEQTLEAVLSVYCFAGLVEESEEQFG 591
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 83/387 (21%), Positives = 172/387 (44%), Gaps = 43/387 (11%)
Query: 98 DFLMLITAYGKQGDFNKAEKVLSFMNKKGYA-PSVVSHTALMEAYGRGGRYKNAEAIFRR 156
DF ++ + ++GD+ ++ ++ +M ++ + P+ +T ++ GR G + + IF
Sbjct: 112 DFALVFKEFAQRGDWQRSLRLFKYMQRQIWCKPNEHIYTIMIGVLGREGLLEKCQEIFDE 171
Query: 157 MQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKK 216
M S G PS + F +I Y +
Sbjct: 172 MPSHGVAPSVFS--------------------------------------FTALINAYGR 193
Query: 217 AGGYEKARKLFALMAERGVQQSTVTYNSLMSFET----NYKEVSKIYDQMQRAGLQPDVV 272
G Y+ + +L M + V S +TYN++++ +++E+ ++ QM+ G+Q D+V
Sbjct: 194 NGQYKSSLELLDRMKKERVSPSILTYNTVINSCARGGLDWEELLGLFAQMRHEGIQADIV 253
Query: 273 SYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCM 332
+Y L++A + +EA VF M + G+ P Y+ L++ F +++ + K M
Sbjct: 254 TYNTLLSACARRGLGDEAEMVFRTMNEGGILPDITTYSYLVETFGKLNRLEKVSELLKEM 313
Query: 333 RRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNL 392
PDI SY +L A+ + ++ A FR+++ G VPN TY L+ Y +
Sbjct: 314 ESGGSFPDITSYNVLLEAHAQSGSIKEAMGVFRQMQGAGCVPNAATYSILLNLYGRHGRY 373
Query: 393 EKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNIL 452
+ + +++ +M+V+ +PN + +++ +G+ F V + +M P+ + L
Sbjct: 374 DDVRDLFLEMKVSNTEPNAATYNILINVFGEGGYFKEVVTLFHDMVEENVEPNMETYEGL 433
Query: 453 LSLAKTADERNEANELLGNFNHPNNEP 479
+ +A ++L + N P
Sbjct: 434 IFACGKGGLHEDAKKILLHMNEKGVVP 460
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 71/288 (24%), Positives = 145/288 (50%), Gaps = 5/288 (1%)
Query: 207 FHMMIYMYKKAGGYEKARKLFALMAER-GVQQSTVTYNSLMSF---ETNYKEVSKIYDQM 262
F ++ + + G ++++ +LF M + + + Y ++ E ++ +I+D+M
Sbjct: 113 FALVFKEFAQRGDWQRSLRLFKYMQRQIWCKPNEHIYTIMIGVLGREGLLEKCQEIFDEM 172
Query: 263 QRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGM- 321
G+ P V S+ LINAYG+ + + +L + + M V P+ YN ++++ A G+
Sbjct: 173 PSHGVAPSVFSFTALINAYGRNGQYKSSLELLDRMKKERVSPSILTYNTVINSCARGGLD 232
Query: 322 VDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGT 381
++ +F MR + DI +Y T+LSA + AE FR + + G +P++ TY
Sbjct: 233 WEELLGLFAQMRHEGIQADIVTYNTLLSACARRGLGDEAEMVFRTMNEGGILPDITTYSY 292
Query: 382 LIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCG 441
L++ + K+N LEK+ E+ +M G P+ T + +++A+ ++ A+ +++M+ G
Sbjct: 293 LVETFGKLNRLEKVSELLKEMESGGSFPDITSYNVLLEAHAQSGSIKEAMGVFRQMQGAG 352
Query: 442 FPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGINGLSISVD 489
P+ +ILL+L ++ +L N EP +I ++
Sbjct: 353 CVPNAATYSILLNLYGRHGRYDDVRDLFLEMKVSNTEPNAATYNILIN 400
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 72/286 (25%), Positives = 136/286 (47%), Gaps = 7/286 (2%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
LI A GK G A+K+L MN+KG PS ++T ++EAYG+ Y+ A F M G
Sbjct: 433 LIFACGKGGLHEDAKKILLHMNEKGVVPSSKAYTGVIEAYGQAALYEEALVAFNTMNEVG 492
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
+P+ TY ++++F + +KE+E + LL +S + ++ F+ +I +++ G +E
Sbjct: 493 SKPTVETYNSLIQMFAKGGLYKESEAI---LLKMGQSGVARNRDTFNGVIEAFRQGGQFE 549
Query: 222 KARKLFALMAERGVQQSTVTYNSLMS---FETNYKEVSKIYDQMQRAGLQPDVVSYALLI 278
+A K + M + T +++S F +E + + +++ G+ P V+ Y +++
Sbjct: 550 EAIKAYVEMEKARCDPDEQTLEAVLSVYCFAGLVEESEEQFGEIKALGILPSVMCYCMML 609
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDA-FAISGMVDQARTVFKCMRRDRC 337
Y KA R ++A + +EM V H+ ++ + VF+ ++ + C
Sbjct: 610 AVYAKADRWDDAHQLLDEMFTNRVSNIHQVIGQMIRGDYDDDSNWQMVEYVFEKLKSEGC 669
Query: 338 SPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLI 383
S + Y T+L A E A + + G P + L+
Sbjct: 670 SLGVRFYNTLLEALWWLGQKERATRVLNEATKRGLFPELFRKNKLV 715
>gi|168033824|ref|XP_001769414.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162679334|gb|EDQ65783.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 410
Score = 159 bits (401), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 104/380 (27%), Positives = 179/380 (47%), Gaps = 36/380 (9%)
Query: 81 EVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEA 140
+V +L+ ++ E + + +I+ G++G A ++ M+K G APSV ++TAL+
Sbjct: 15 QVFRFLQEHLEYELKEHNCVTIISILGREGKLGLAREIFEGMSKAGVAPSVHAYTALLSG 74
Query: 141 YGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVE--------ANKFKEAEE----- 187
Y + G K A A+F M+ G P+ LTY ++ + F+E ++
Sbjct: 75 YAKQGLLKEAWALFEAMKEKGCSPNVLTYNTLINACTKRAYRLPDLVGLFEEMKQAGVQP 134
Query: 188 ------------VFMTLLDEEKSPLK--------PDQKMFHMMIYMYKKAGGYEKARKLF 227
V ++L D LK P+ + MI ++G ++A +LF
Sbjct: 135 NDITYNCMVNACVCLSLFDTASQILKEMKAVNCLPNVISYTTMINSLGRSGRLDEAVELF 194
Query: 228 ALMAERGVQQSTVTYNSLM---SFETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKA 284
M E G ++ TYNSL+ + E Y++ ++ M+ G PD+ +Y +I+ G+
Sbjct: 195 EEMKELGRSPNSWTYNSLLKAYAREGRYEKAMCLFVGMEDEGCIPDLYTYNTVIDMCGRG 254
Query: 285 RREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSY 344
EA VF EM G P YN +LDA++ +AR + K M+R C+PD+ +Y
Sbjct: 255 GLFAEAEGVFLEMQRKGCTPDRVTYNTMLDAYSKWSRRGRARDLLKTMKRAGCTPDLWTY 314
Query: 345 TTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRV 404
+L A A A + F LK G PN++++ LI Y ++ E+ + +MR
Sbjct: 315 NILLDAAGKAGSASEAMQIFHELKAAGHSPNLVSFSALINMYGRLGYFEEAERAWVEMRA 374
Query: 405 NGIKPNQTIFTTIMDAYGKN 424
G PN T + +M++Y +
Sbjct: 375 TGCVPNATAYCGLMNSYSHH 394
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 95/339 (28%), Positives = 159/339 (46%), Gaps = 8/339 (2%)
Query: 183 KEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTY 242
++A +VF L + + LK + +I + + G AR++F M++ GV S Y
Sbjct: 11 RQALQVFRFLQEHLEYELKEHNCV--TIISILGREGKLGLAREIFEGMSKAGVAPSVHAY 68
Query: 243 NSLMSFETN---YKEVSKIYDQMQRAGLQPDVVSYALLINAYGK-ARREEEALAVFEEML 298
+L+S KE +++ M+ G P+V++Y LINA K A R + + +FEEM
Sbjct: 69 TALLSGYAKQGLLKEAWALFEAMKEKGCSPNVLTYNTLINACTKRAYRLPDLVGLFEEMK 128
Query: 299 DAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDME 358
AGV+P YN +++A + D A + K M+ C P++ SYTTM+++ + ++
Sbjct: 129 QAGVQPNDITYNCMVNACVCLSLFDTASQILKEMKAVNCLPNVISYTTMINSLGRSGRLD 188
Query: 359 GAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIM 418
A + F +K+ G PN TY +L+K YA+ EK M ++ M G P+ + T++
Sbjct: 189 EAVELFEEMKELGRSPNSWTYNSLLKAYAREGRYEKAMCLFVGMEDEGCIPDLYTYNTVI 248
Query: 419 DAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNE 478
D G+ F A + EM+ G PD+ N +L R A +LL
Sbjct: 249 DMCGRGGLFAEAEGVFLEMQRKGCTPDRVTYNTMLDAYSKWSRRGRARDLLKTMKRAGCT 308
Query: 479 PGINGLSISVDEEDDDDDDDEDDDDNIYHDGDGDGDGDD 517
P + +I +D E I+H+ G +
Sbjct: 309 PDLWTYNILLDAAGKAGSASEAMQ--IFHELKAAGHSPN 345
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 76/279 (27%), Positives = 136/279 (48%), Gaps = 12/279 (4%)
Query: 59 PKDLVLGTLVR-LKQLKKWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEK 117
P D+ +V L ++ S++L+ ++ + N + + +I + G+ G ++A +
Sbjct: 134 PNDITYNCMVNACVCLSLFDTASQILKEMKAVNCLP-NVISYTTMINSLGRSGRLDEAVE 192
Query: 118 VLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFV 177
+ M + G +P+ ++ +L++AY R GRY+ A +F M+ G P TY ++ +
Sbjct: 193 LFEEMKELGRSPNSWTYNSLLKAYAREGRYEKAMCLFVGMEDEGCIPDLYTYNTVIDMCG 252
Query: 178 EANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQ 237
F EAE VF L+ ++ PD+ ++ M+ Y K +AR L M G
Sbjct: 253 RGGLFAEAEGVF---LEMQRKGCTPDRVTYNTMLDAYSKWSRRGRARDLLKTMKRAGCTP 309
Query: 238 STVTYNSLMSFET---NYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVF 294
TYN L+ + E +I+ +++ AG P++VS++ LIN YG+ EEA +
Sbjct: 310 DLWTYNILLDAAGKAGSASEAMQIFHELKAAGHSPNLVSFSALINMYGRLGYFEEAERAW 369
Query: 295 EEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMR 333
EM G P AY L+++++ GM V C+R
Sbjct: 370 VEMRATGCVPNATAYCGLMNSYSHHGMYK----VLCCIR 404
>gi|20219038|gb|AAM15782.1|AC104428_3 Putative indole-3-acetate beta-glucosyltransferase [Oryza sativa
Japonica Group]
gi|108706351|gb|ABF94146.1| Rf1 protein, mitochondrial precursor, putative [Oryza sativa
Japonica Group]
gi|125585039|gb|EAZ25703.1| hypothetical protein OsJ_09536 [Oryza sativa Japonica Group]
Length = 648
Score = 159 bits (401), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 102/404 (25%), Positives = 193/404 (47%), Gaps = 45/404 (11%)
Query: 89 QSWWDFNEMD----------FLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALM 138
++W F EMD F +LI + + G+ +A K+ M +G P +VS + L+
Sbjct: 244 KAWEVFKEMDDFGVAPDVRSFTILIGGFCRVGEIEEALKIYKEMRHRGIKPDLVSFSCLI 303
Query: 139 EAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEV---------- 188
+ R G+ +A A R M+ G P + Y +++ F A +A V
Sbjct: 304 GLFARRGKMDHAMAYLREMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCL 363
Query: 189 -----FMTLLD---EEKSPL--------------KPDQKMFHMMIYMYKKAGGYEKARKL 226
+ TLL+ +E+ L PD F +I+ Y G +KA +L
Sbjct: 364 PDVVTYNTLLNGLCKERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQL 423
Query: 227 FALMAERGVQQSTVTYNSL---MSFETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGK 283
F M + ++ VTYN+L M + + + + ++D M + P+ V+Y++LI+++ +
Sbjct: 424 FDTMLNQRLRPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCE 483
Query: 284 ARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICS 343
+ E+A +EM++ G+ P YN ++ + SG V + + + M ++ SPD+ +
Sbjct: 484 KGQVEDAFGFLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLIT 543
Query: 344 YTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMR 403
Y T++ Y+ M A K ++++ P+V+TY LI G++ N+++ I++KM
Sbjct: 544 YNTLIHGYIKEDKMHDAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEKMC 603
Query: 404 VNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQK 447
GI+P++ + ++++ + + A + EM GF PD K
Sbjct: 604 AKGIEPDRYTYMSMINGHVTAGNSKEAFQLHDEMLQRGFAPDDK 647
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 95/356 (26%), Positives = 174/356 (48%), Gaps = 6/356 (1%)
Query: 101 MLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSS 160
+++ Y K +F+K + V+S M K+ P VV+H +++A R G + A A+ M S
Sbjct: 161 IMVHNYCKALEFDKVDAVISEMEKRCVFPDVVTHNVMVDARFRAGDAEAAMALVDSMVSK 220
Query: 161 GPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGY 220
G +P +TY +LK + + +A EVF + D + PD + F ++I + + G
Sbjct: 221 GLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDD---FGVAPDVRSFTILIGGFCRVGEI 277
Query: 221 EKARKLFALMAERGVQQSTVTYNSLMSF---ETNYKEVSKIYDQMQRAGLQPDVVSYALL 277
E+A K++ M RG++ V+++ L+ +M+ GL PD V Y ++
Sbjct: 278 EEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMDHAMAYLREMRCFGLVPDGVIYTMV 337
Query: 278 INAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRC 337
I + +A +AL V +EM+ G P YN LL+ + A + MR
Sbjct: 338 IGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAEGLLNEMRERGV 397
Query: 338 SPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMME 397
PD+C++TT++ Y ++ A + F + P+++TY TLI G + +L+K +
Sbjct: 398 PPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQGDLDKAND 457
Query: 398 IYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILL 453
++D M I PN ++ ++D++ + + A + EM + G P+ N ++
Sbjct: 458 LWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGILPNIMTYNSII 513
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 95/357 (26%), Positives = 172/357 (48%), Gaps = 8/357 (2%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
++ + G ++KA +V M+ G AP V S T L+ + R G + A I++ M+ G
Sbjct: 232 VLKGLCRSGMWDKAWEVFKEMDDFGVAPDVRSFTILIGGFCRVGEIEEALKIYKEMRHRG 291
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKS-PLKPDQKMFHMMIYMYKKAGGY 220
+P +++ ++ LF K A M L E + L PD ++ M+I + +AG
Sbjct: 292 IKPDLVSFSCLIGLFARRGKMDHA----MAYLREMRCFGLVPDGVIYTMVIGGFCRAGLM 347
Query: 221 EKARKLFALMAERGVQQSTVTYNSLMSF---ETNYKEVSKIYDQMQRAGLQPDVVSYALL 277
A ++ M G VTYN+L++ E + + ++M+ G+ PD+ ++ L
Sbjct: 348 SDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAEGLLNEMRERGVPPDLCTFTTL 407
Query: 278 INAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRC 337
I+ Y + ++AL +F+ ML+ +RP YN L+D G +D+A ++ M
Sbjct: 408 IHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSREI 467
Query: 338 SPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMME 397
P+ +Y+ ++ ++ +E A F + G +PN++TY ++IKGY + N+ K +
Sbjct: 468 FPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQK 527
Query: 398 IYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLS 454
KM VN + P+ + T++ Y K A ME PD N+L++
Sbjct: 528 FLQKMMVNKVSPDLITYNTLIHGYIKEDKMHDAFKLLNMMEKEKVQPDVVTYNMLIN 584
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 91/352 (25%), Positives = 161/352 (45%), Gaps = 6/352 (1%)
Query: 143 RGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKP 202
R G A +R + SS + T I++ + +A +F + + V + EK + P
Sbjct: 133 RAGWPHLAADAYRLVFSSNSEVNTYTLNIMVHNYCKALEFDKVDAVISEM---EKRCVFP 189
Query: 203 DQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETN---YKEVSKIY 259
D ++M+ +AG E A L M +G++ VTYNS++ + + +++
Sbjct: 190 DVVTHNVMVDARFRAGDAEAAMALVDSMVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVF 249
Query: 260 DQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAIS 319
+M G+ PDV S+ +LI + + EEAL +++EM G++P +++ L+ FA
Sbjct: 250 KEMDDFGVAPDVRSFTILIGGFCRVGEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFARR 309
Query: 320 GMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITY 379
G +D A + MR PD YT ++ + A M A + + G +P+V+TY
Sbjct: 310 GKMDHAMAYLREMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTY 369
Query: 380 GTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMES 439
TL+ G K L + ++MR G+ P+ FTT++ Y D A+ + M +
Sbjct: 370 NTLLNGLCKERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLN 429
Query: 440 CGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGINGLSISVDEE 491
PD N L+ + ++AN+L + + P SI +D
Sbjct: 430 QRLRPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSH 481
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 74/305 (24%), Positives = 150/305 (49%), Gaps = 6/305 (1%)
Query: 153 IFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIY 212
I + S P P + ++++ + ++ K +EA E F +LD + P+ + ++
Sbjct: 73 IVSSLLGSSPTPQPRVFDLLIRTYTQSRKPREAFEAFRLILDH-RVPIP--AAASNALLA 129
Query: 213 MYKKAGGYEKARKLFALMAERGVQQSTVTYNSLM---SFETNYKEVSKIYDQMQRAGLQP 269
+AG A + L+ + +T T N ++ + +V + +M++ + P
Sbjct: 130 ALSRAGWPHLAADAYRLVFSSNSEVNTYTLNIMVHNYCKALEFDKVDAVISEMEKRCVFP 189
Query: 270 DVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVF 329
DVV++ ++++A +A E A+A+ + M+ G++P YN +L SGM D+A VF
Sbjct: 190 DVVTHNVMVDARFRAGDAEAAMALVDSMVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVF 249
Query: 330 KCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKV 389
K M +PD+ S+T ++ + ++E A K ++ ++ G P+++++ LI +A+
Sbjct: 250 KEMDDFGVAPDVRSFTILIGGFCRVGEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFARR 309
Query: 390 NNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAK 449
++ M +MR G+ P+ I+T ++ + + A+ EM CG PD
Sbjct: 310 GKMDHAMAYLREMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTY 369
Query: 450 NILLS 454
N LL+
Sbjct: 370 NTLLN 374
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 50/221 (22%), Positives = 95/221 (42%), Gaps = 2/221 (0%)
Query: 268 QPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQART 327
QP V + LLI Y ++R+ EA F +LD V A N LL A + +G A
Sbjct: 85 QPRV--FDLLIRTYTQSRKPREAFEAFRLILDHRVPIPAAASNALLAALSRAGWPHLAAD 142
Query: 328 VFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYA 387
++ + + + M+ Y A + + + +++ P+V+T+ ++
Sbjct: 143 AYRLVFSSNSEVNTYTLNIMVHNYCKALEFDKVDAVISEMEKRCVFPDVVTHNVMVDARF 202
Query: 388 KVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQK 447
+ + E M + D M G+KP + +++ ++ +D A +KEM+ G PD +
Sbjct: 203 RAGDAEAAMALVDSMVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFGVAPDVR 262
Query: 448 AKNILLSLAKTADERNEANELLGNFNHPNNEPGINGLSISV 488
+ IL+ E EA ++ H +P + S +
Sbjct: 263 SFTILIGGFCRVGEIEEALKIYKEMRHRGIKPDLVSFSCLI 303
>gi|297848852|ref|XP_002892307.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein [Arabidopsis
lyrata subsp. lyrata]
gi|297338149|gb|EFH68566.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein [Arabidopsis
lyrata subsp. lyrata]
Length = 1164
Score = 159 bits (401), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 100/393 (25%), Positives = 173/393 (44%), Gaps = 41/393 (10%)
Query: 94 FNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAI 153
+N + ++I + G N+A +L M KGY P V+S++ ++ Y R G +
Sbjct: 667 WNVASYNIVIHFVCQLGRINEAHHLLLLMELKGYTPDVISYSTVINGYCRFGELDKVWKL 726
Query: 154 FRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYM 213
+M+ G +P++ TY I+ L K EAEE F ++ + + PD ++ ++
Sbjct: 727 IEKMKQKGLKPNSYTYGSIIGLLCRICKLAEAEEAFSEMIGQG---ILPDTIVYTTLVDG 783
Query: 214 YKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFET---NYKEVSKIYDQMQRAGLQPD 270
+ K G A K F M R + +TY +++S + E K++ +M GL+PD
Sbjct: 784 FCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMLCRGLEPD 843
Query: 271 VVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFK 330
++++ L+N Y KA ++A V M+ AG P Y L+D G +D A +
Sbjct: 844 IITFTELMNGYCKAGHIKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLH 903
Query: 331 CMRRDRCSPDI----------C-------------------------SYTTMLSAYVNAS 355
M + P+I C +YTT++ AY +
Sbjct: 904 EMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSG 963
Query: 356 DMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFT 415
+M+ A++ + G P ++T+ L+ G+ LE ++ + M GI PN T F
Sbjct: 964 EMDKAQEILTEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFN 1023
Query: 416 TIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKA 448
++ Y + +A YK+M S G PD K
Sbjct: 1024 CLVKQYCIRNNLKAATAIYKDMCSRGVEPDGKT 1056
Score = 145 bits (365), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 98/371 (26%), Positives = 173/371 (46%), Gaps = 41/371 (11%)
Query: 99 FLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQ 158
+ L+ + K+GD A K M+ + P V+++TA++ + + G A +F M
Sbjct: 777 YTTLVDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEML 836
Query: 159 SSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAG 218
G P +T+ ++ + +A K+A V ++ ++ P+ + +I K G
Sbjct: 837 CRGLEPDIITFTELMNGYCKAGHIKDAFRVHNHMI---QAGCSPNVVTYTTLIDGLCKEG 893
Query: 219 GYEKARKLFALMAERGVQQSTVTYNSL---MSFETNYKEVSKIYDQMQRAGLQPDVVSYA 275
+ A +L M + G+Q + TYNS+ + N +E K+ + + AGL D V+Y
Sbjct: 894 DLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYT 953
Query: 276 LLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQAR--------- 326
L++AY K+ ++A + EML G++PT +N+L++ F + GM++
Sbjct: 954 TLMDAYCKSGEMDKAQEILTEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAK 1013
Query: 327 ------TVFKCM----------------RRDRCS----PDICSYTTMLSAYVNASDMEGA 360
T F C+ +D CS PD +Y ++ + NA +M+ A
Sbjct: 1014 GIAPNATTFNCLVKQYCIRNNLKAATAIYKDMCSRGVEPDGKTYENLVKGHCNARNMKEA 1073
Query: 361 EKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDA 420
F+ +K GF +V TY LIKG+ K + EI+D+MR +G+ ++ IF D
Sbjct: 1074 WFLFQEMKGKGFSVSVSTYSVLIKGFFKRKKFVEAREIFDQMRRDGLAADKEIFDFFSDT 1133
Query: 421 YGKNKDFDSAV 431
K K D+ V
Sbjct: 1134 KYKGKRPDTIV 1144
Score = 142 bits (359), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 88/343 (25%), Positives = 160/343 (46%), Gaps = 6/343 (1%)
Query: 114 KAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIIL 173
+AE+ S M +G P + +T L++ + + G + A F M S P LTY I+
Sbjct: 757 EAEEAFSEMIGQGILPDTIVYTTLVDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAII 816
Query: 174 KLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAER 233
F + EA ++F +L L+PD F ++ Y KAG + A ++ M +
Sbjct: 817 SGFCQIGDMVEAGKLFHEMLCRG---LEPDIITFTELMNGYCKAGHIKDAFRVHNHMIQA 873
Query: 234 GVQQSTVTYNSL---MSFETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEA 290
G + VTY +L + E + +++ +M + GLQP++ +Y ++N K+ EEA
Sbjct: 874 GCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEA 933
Query: 291 LAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSA 350
+ + E AG+ Y L+DA+ SG +D+A+ + M P I ++ +++
Sbjct: 934 VKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILTEMLGKGLQPTIVTFNVLMNG 993
Query: 351 YVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPN 410
+ +E EK + G PN T+ L+K Y NNL+ IY M G++P+
Sbjct: 994 FCLHGMLEDGEKLLNWMLAKGIAPNATTFNCLVKQYCIRNNLKAATAIYKDMCSRGVEPD 1053
Query: 411 QTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILL 453
+ ++ + ++ A ++EM+ GF ++L+
Sbjct: 1054 GKTYENLVKGHCNARNMKEAWFLFQEMKGKGFSVSVSTYSVLI 1096
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 92/382 (24%), Positives = 170/382 (44%), Gaps = 16/382 (4%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYA-------PSVVSHTALMEAYGRGGRYKNAEAIF 154
LI+++ ++ N E + F + Y P V + G A +F
Sbjct: 564 LISSFWERPKLNVTESFVQFFDLLVYTYKDWGSDPRVFD--VFFQVLVEFGMLPEARKVF 621
Query: 155 RRMQSSGPRPSALTYQIIL-KLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYM 213
+M + G S + + L +L + NK A VF + + + ++++I+
Sbjct: 622 EKMLNYGLVLSVDSCNVYLARLSKDCNKTATAIIVFREF---PEVGVCWNVASYNIVIHF 678
Query: 214 YKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSKIY---DQMQRAGLQPD 270
+ G +A L LM +G ++Y+++++ + E+ K++ ++M++ GL+P+
Sbjct: 679 VCQLGRINEAHHLLLLMELKGYTPDVISYSTVINGYCRFGELDKVWKLIEKMKQKGLKPN 738
Query: 271 VVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFK 330
+Y +I + + EA F EM+ G+ P Y L+D F G + A F
Sbjct: 739 SYTYGSIIGLLCRICKLAEAEEAFSEMIGQGILPDTIVYTTLVDGFCKRGDIRAASKFFY 798
Query: 331 CMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVN 390
M +PD+ +YT ++S + DM A K F + G P++IT+ L+ GY K
Sbjct: 799 EMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMLCRGLEPDIITFTELMNGYCKAG 858
Query: 391 NLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKN 450
+++ +++ M G PN +TT++D K D DSA EM G P+ N
Sbjct: 859 HIKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYN 918
Query: 451 ILLSLAKTADERNEANELLGNF 472
+++ + EA +L+G F
Sbjct: 919 SIVNGLCKSGNIEEAVKLVGEF 940
Score = 122 bits (305), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 90/376 (23%), Positives = 160/376 (42%), Gaps = 7/376 (1%)
Query: 110 GDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGR-GGRYKNAEAIFRRMQSSGPRPSALT 168
G +A KV M G SV S + + + A +FR G + +
Sbjct: 612 GMLPEARKVFEKMLNYGLVLSVDSCNVYLARLSKDCNKTATAIIVFREFPEVGVCWNVAS 671
Query: 169 YQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFA 228
Y I++ + + EA + + + E PD + +I Y + G +K KL
Sbjct: 672 YNIVIHFVCQLGRINEAHHLLLLM---ELKGYTPDVISYSTVINGYCRFGELDKVWKLIE 728
Query: 229 LMAERGVQQSTVTYNSLMSFET---NYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKAR 285
M ++G++ ++ TY S++ E + + +M G+ PD + Y L++ + K
Sbjct: 729 KMKQKGLKPNSYTYGSIIGLLCRICKLAEAEEAFSEMIGQGILPDTIVYTTLVDGFCKRG 788
Query: 286 REEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYT 345
A F EM + P Y ++ F G + +A +F M PDI ++T
Sbjct: 789 DIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMLCRGLEPDIITFT 848
Query: 346 TMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVN 405
+++ Y A ++ A + + Q G PNV+TY TLI G K +L+ E+ +M
Sbjct: 849 ELMNGYCKAGHIKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKI 908
Query: 406 GIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEA 465
G++PN + +I++ K+ + + AV E E+ G D L+ + E ++A
Sbjct: 909 GLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKA 968
Query: 466 NELLGNFNHPNNEPGI 481
E+L +P I
Sbjct: 969 QEILTEMLGKGLQPTI 984
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 63/256 (24%), Positives = 122/256 (47%), Gaps = 6/256 (2%)
Query: 88 IQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRY 147
IQ+ N + + LI K+GD + A ++L M K G P++ ++ +++ + G
Sbjct: 871 IQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNI 930
Query: 148 KNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMF 207
+ A + +++G +TY ++ + ++ + +A+E+ +L + L+P F
Sbjct: 931 EEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILTEMLGKG---LQPTIVTF 987
Query: 208 HMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLM---SFETNYKEVSKIYDQMQR 264
++++ + G E KL M +G+ + T+N L+ N K + IY M
Sbjct: 988 NVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNCLVKQYCIRNNLKAATAIYKDMCS 1047
Query: 265 AGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQ 324
G++PD +Y L+ + AR +EA +F+EM G + Y++L+ F +
Sbjct: 1048 RGVEPDGKTYENLVKGHCNARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFFKRKKFVE 1107
Query: 325 ARTVFKCMRRDRCSPD 340
AR +F MRRD + D
Sbjct: 1108 AREIFDQMRRDGLAAD 1123
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 75/313 (23%), Positives = 137/313 (43%), Gaps = 17/313 (5%)
Query: 171 IILKLFVEANKFKEAEEVFMTLLDEEKSPLKPD-QKMFHMMIYMYKKAGGYEKARKLFAL 229
I++ L V + K A+ + + + K + + F +++Y YK G + +F
Sbjct: 547 IVIHLAVASKDLKVAQSLISSFWERPKLNVTESFVQFFDLLVYTYKDWGSDPRVFDVFF- 605
Query: 230 MAERGVQQSTVTYNSLMSFETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGK-ARREE 288
Q V + L E K++++M GL V S + + K +
Sbjct: 606 -------QVLVEFGML-------PEARKVFEKMLNYGLVLSVDSCNVYLARLSKDCNKTA 651
Query: 289 EALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTML 348
A+ VF E + GV +YNI++ G +++A + M +PD+ SY+T++
Sbjct: 652 TAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRINEAHHLLLLMELKGYTPDVISYSTVI 711
Query: 349 SAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIK 408
+ Y +++ K ++KQ G PN TYG++I ++ L + E + +M GI
Sbjct: 712 NGYCRFGELDKVWKLIEKMKQKGLKPNSYTYGSIIGLLCRICKLAEAEEAFSEMIGQGIL 771
Query: 409 PNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANEL 468
P+ ++TT++D + K D +A ++ EM S PD ++S + EA +L
Sbjct: 772 PDTIVYTTLVDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKL 831
Query: 469 LGNFNHPNNEPGI 481
EP I
Sbjct: 832 FHEMLCRGLEPDI 844
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 101/208 (48%), Gaps = 6/208 (2%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
+ + + L+ AY K G+ +KA+++L+ M KG P++V+ LM + G ++ E +
Sbjct: 948 DTVTYTTLMDAYCKSGEMDKAQEILTEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLL 1007
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
M + G P+A T+ ++K + N K A ++ D ++PD K + ++ +
Sbjct: 1008 NWMLAKGIAPNATTFNCLVKQYCIRNNLKAATAIYK---DMCSRGVEPDGKTYENLVKGH 1064
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSLMSF---ETNYKEVSKIYDQMQRAGLQPDV 271
A ++A LF M +G S TY+ L+ + E +I+DQM+R GL D
Sbjct: 1065 CNARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFFKRKKFVEAREIFDQMRRDGLAADK 1124
Query: 272 VSYALLINAYGKARREEEALAVFEEMLD 299
+ + K +R + + +E+++
Sbjct: 1125 EIFDFFSDTKYKGKRPDTIVDPIDEIIE 1152
>gi|357449339|ref|XP_003594946.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|124359380|gb|ABN05846.1| Tetratricopeptide-like helical [Medicago truncatula]
gi|355483994|gb|AES65197.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 849
Score = 159 bits (401), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 109/413 (26%), Positives = 195/413 (47%), Gaps = 19/413 (4%)
Query: 53 TRGQPLPKDLVLGTLVRLKQLKKWNVVSEVLEWLRIQSWWDF-------NEMDFLMLITA 105
+G+ L D+ G L L W + EW+ W +F ++ ++
Sbjct: 157 VKGELLESDIT-GLLKGLDLSGNWERAFLLFEWV----WLNFGSENMKVDDQSVEFMVKM 211
Query: 106 YGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPS 165
G++ ++ A K+ + + Y+ V + T ++ AY R G+YK A IF +M+ +G P+
Sbjct: 212 LGRESQYSIASKLFDIIPVEEYSLDVKACTTVLHAYARTGKYKRAIEIFEKMKETGLDPT 271
Query: 166 ALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSP-LKPDQKMFHMMIYMYKKAGGYEKAR 224
+TY ++L ++ K A + + LLDE +S L+ D+ +I + G ++AR
Sbjct: 272 LVTYNVMLDVY---GKMGRAWSMILELLDEMRSKGLEFDEFTCTTVISACGREGILDEAR 328
Query: 225 KLFALMAERGVQQSTVTYNSLMSF---ETNYKEVSKIYDQMQRAGLQPDVVSYALLINAY 281
+ F + G + T TYNS++ Y E I +M+ +PD ++Y L+ AY
Sbjct: 329 RFFDDLKLNGYKPGTATYNSMLQVFGKAGVYTEALNILKEMEDNNCEPDAITYNELVAAY 388
Query: 282 GKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDI 341
+A +E AV + M GV P Y +++A+ +G D+A VF M+ C P++
Sbjct: 389 VRAGFHDEGAAVIDTMASKGVMPNAITYTTVINAYGKAGDADKALEVFGQMKELGCVPNV 448
Query: 342 CSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDK 401
C+Y +L S E K +K +G P+ IT+ T++ + + + ++ +
Sbjct: 449 CTYNNVLVLLGKRSRSEDMIKILCDMKLNGCPPDRITWNTMLAVCGEKGKQKFVSQVLRE 508
Query: 402 MRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLS 454
M+ G +P++ F T++ AYG+ Y EM + GF P N LL+
Sbjct: 509 MKNCGFEPDKETFNTLISAYGRCGSEVDVAKMYGEMVAAGFTPCITTYNALLN 561
Score = 151 bits (382), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 103/453 (22%), Positives = 200/453 (44%), Gaps = 77/453 (16%)
Query: 74 KKWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVS 133
+ W+++ E+L+ +R + +F+E +I+A G++G ++A + + GY P +
Sbjct: 287 RAWSMILELLDEMRSKGL-EFDEFTCTTVISACGREGILDEARRFFDDLKLNGYKPGTAT 345
Query: 134 HTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLL 193
+ ++++ +G+ G Y A I + M+ + P A+TY ++ +V A E V T+
Sbjct: 346 YNSMLQVFGKAGVYTEALNILKEMEDNNCEPDAITYNELVAAYVRAGFHDEGAAVIDTMA 405
Query: 194 DEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSF----- 248
+ + P+ + +I Y KAG +KA ++F M E G + TYN+++
Sbjct: 406 SK---GVMPNAITYTTVINAYGKAGDADKALEVFGQMKELGCVPNVCTYNNVLVLLGKRS 462
Query: 249 ---------------------------------ETNYKEVSKIYDQMQRAGLQPDVVSYA 275
+ K VS++ +M+ G +PD ++
Sbjct: 463 RSEDMIKILCDMKLNGCPPDRITWNTMLAVCGEKGKQKFVSQVLREMKNCGFEPDKETFN 522
Query: 276 LLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRD 335
LI+AYG+ E + ++ EM+ AG P YN LL+A A G A +V MR+
Sbjct: 523 TLISAYGRCGSEVDVAKMYGEMVAAGFTPCITTYNALLNALARRGNWKAAESVVLDMRKK 582
Query: 336 RCSPDICSYTTMLSAYVNASDMEGAEKF-------------------------------- 363
P+ SY+ +L Y A ++ G EK
Sbjct: 583 GFKPNETSYSLLLHCYSKAGNVRGLEKVEMEIYDGHVFPSWMLLRTLVLTNYKCRQLKGM 642
Query: 364 ---FRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDA 420
F +L+ +G+ +++ +++ + + LEK E+ D + V+G++PN + +++D
Sbjct: 643 ERAFHQLQNNGYKLDMVVINSMLSMFVRNQKLEKAHEMLDVIHVSGLQPNLVTYNSLIDL 702
Query: 421 YGKNKDFDSAVVWYKEMESCGFPPDQKAKNILL 453
Y + D A K++++ G PD + N ++
Sbjct: 703 YARVGDCWKAEEMLKDIQNSGISPDVVSYNTVI 735
Score = 138 bits (348), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 99/409 (24%), Positives = 181/409 (44%), Gaps = 41/409 (10%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + + +I AYGK GD +KA +V M + G P+V ++ ++ G+ R ++ I
Sbjct: 412 NAITYTTVINAYGKAGDADKALEVFGQMKELGCVPNVCTYNNVLVLLGKRSRSEDMIKIL 471
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
M+ +G P +T+ +L + E K K +V L + + +PD++ F+ +I Y
Sbjct: 472 CDMKLNGCPPDRITWNTMLAVCGEKGKQKFVSQV---LREMKNCGFEPDKETFNTLISAY 528
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSLMSF---ETNYKEVSKIYDQMQRAGLQPDV 271
+ G K++ M G TYN+L++ N+K + M++ G +P+
Sbjct: 529 GRCGSEVDVAKMYGEMVAAGFTPCITTYNALLNALARRGNWKAAESVVLDMRKKGFKPNE 588
Query: 272 VSYALLINAYGKARREEEALAVFEEMLDAGVRPT--------------------HKAYNI 311
SY+LL++ Y KA V E+ D V P+ +A++
Sbjct: 589 TSYSLLLHCYSKAGNVRGLEKVEMEIYDGHVFPSWMLLRTLVLTNYKCRQLKGMERAFHQ 648
Query: 312 L------LDAFAISGMV---------DQARTVFKCMRRDRCSPDICSYTTMLSAYVNASD 356
L LD I+ M+ ++A + + P++ +Y +++ Y D
Sbjct: 649 LQNNGYKLDMVVINSMLSMFVRNQKLEKAHEMLDVIHVSGLQPNLVTYNSLIDLYARVGD 708
Query: 357 MEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTT 416
AE+ + ++ G P+V++Y T+IKG+ K +++ + I +M NG++P F T
Sbjct: 709 CWKAEEMLKDIQNSGISPDVVSYNTVIKGFCKKGLVQEAIRILSEMTANGVQPCPITFNT 768
Query: 417 IMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEA 465
M Y N F A + M G P++ I++ A + EA
Sbjct: 769 FMSCYAGNGLFAEADEVIRYMIEHGCMPNELTYKIVIDGYIKAKKHKEA 817
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 83/353 (23%), Positives = 167/353 (47%), Gaps = 11/353 (3%)
Query: 135 TALMEAYGRGGRYKNA----EAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFM 190
T L++ G ++ A E ++ S + + + ++K+ +++ A ++F
Sbjct: 167 TGLLKGLDLSGNWERAFLLFEWVWLNFGSENMKVDDQSVEFMVKMLGRESQYSIASKLFD 226
Query: 191 TLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFET 250
+ EE S D K +++ Y + G Y++A ++F M E G+ + VTYN ++
Sbjct: 227 IIPVEEYSL---DVKACTTVLHAYARTGKYKRAIEIFEKMKETGLDPTLVTYNVMLDVYG 283
Query: 251 N----YKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTH 306
+ + ++ D+M+ GL+ D + +I+A G+ +EA F+++ G +P
Sbjct: 284 KMGRAWSMILELLDEMRSKGLEFDEFTCTTVISACGREGILDEARRFFDDLKLNGYKPGT 343
Query: 307 KAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRR 366
YN +L F +G+ +A + K M + C PD +Y +++AYV A +
Sbjct: 344 ATYNSMLQVFGKAGVYTEALNILKEMEDNNCEPDAITYNELVAAYVRAGFHDEGAAVIDT 403
Query: 367 LKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKD 426
+ G +PN ITY T+I Y K + +K +E++ +M+ G PN + ++ GK
Sbjct: 404 MASKGVMPNAITYTTVINAYGKAGDADKALEVFGQMKELGCVPNVCTYNNVLVLLGKRSR 463
Query: 427 FDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEP 479
+ + +M+ G PPD+ N +L++ ++ +++L + EP
Sbjct: 464 SEDMIKILCDMKLNGCPPDRITWNTMLAVCGEKGKQKFVSQVLREMKNCGFEP 516
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 81/335 (24%), Positives = 155/335 (46%), Gaps = 10/335 (2%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
++ G++G +VL M G+ P + L+ AYGR G + ++ M ++G
Sbjct: 489 MLAVCGEKGKQKFVSQVLREMKNCGFEPDKETFNTLISAYGRCGSEVDVAKMYGEMVAAG 548
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
P TY +L +K AE V +LD K KP++ + ++++ Y KAG
Sbjct: 549 FTPCITTYNALLNALARRGNWKAAESV---VLDMRKKGFKPNETSYSLLLHCYSKAGNVR 605
Query: 222 KARKLFALMAERGVQQSTVTYNSLMSFETNYK-----EVSKIYDQMQRAGLQPDVVSYAL 276
K+ + + V S + +L+ TNYK + + + Q+Q G + D+V
Sbjct: 606 GLEKVEMEIYDGHVFPSWMLLRTLVL--TNYKCRQLKGMERAFHQLQNNGYKLDMVVINS 663
Query: 277 LINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDR 336
+++ + + ++ E+A + + + +G++P YN L+D +A G +A + K ++
Sbjct: 664 MLSMFVRNQKLEKAHEMLDVIHVSGLQPNLVTYNSLIDLYARVGDCWKAEEMLKDIQNSG 723
Query: 337 CSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMM 396
SPD+ SY T++ + ++ A + + +G P IT+ T + YA +
Sbjct: 724 ISPDVVSYNTVIKGFCKKGLVQEAIRILSEMTANGVQPCPITFNTFMSCYAGNGLFAEAD 783
Query: 397 EIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAV 431
E+ M +G PN+ + ++D Y K K A+
Sbjct: 784 EVIRYMIEHGCMPNELTYKIVIDGYIKAKKHKEAM 818
>gi|224133106|ref|XP_002327962.1| predicted protein [Populus trichocarpa]
gi|222837371|gb|EEE75750.1| predicted protein [Populus trichocarpa]
Length = 487
Score = 159 bits (401), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 106/406 (26%), Positives = 194/406 (47%), Gaps = 16/406 (3%)
Query: 56 QPLPK----DLVLGTLVRLKQLKKWNVVSEVLEWLRIQS-WWDFNEMDFLMLITAYGKQG 110
PLP D +L LVR+K +S+ +E LRI+ + FN +LI + +
Sbjct: 79 HPLPCIVEFDKLLSALVRIKHYGTVLSLSKRIELLRIERDVFHFN-----ILINCFSRLQ 133
Query: 111 DFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQ 170
+ A VL + K G+ P V+ ++L+ ++ A F M +SG +P+ TY
Sbjct: 134 RVDFAFSVLGKIIKLGFEPDAVTFSSLINGLCFEDKFARAMEFFDEMVASGYQPNLHTYN 193
Query: 171 IILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALM 230
I+K F + K A + + +K+ +PD +++ +I K +A +F+ +
Sbjct: 194 TIIKGFCKIGKTTVAVGLLKKM---DKAGGRPDIVIYNTIIDGLCKDRLVSEALDIFSEI 250
Query: 231 AERGVQQSTVTYNSLMSFETNY---KEVSKIYDQMQRAGLQPDVVSYALLINAYGKARRE 287
+GV+ TY+ LM N +E S ++++M + PDVV++ +L++ K
Sbjct: 251 KGKGVRPDVFTYSILMHGLCNSDQKEEASALFNEMMSLNIMPDVVTFNILVDKLCKEGML 310
Query: 288 EEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTM 347
EA + + M++ GV P + YN L++ + + V +AR VF M C P++ SY +
Sbjct: 311 SEAQGIIKIMIEKGVEPNYATYNSLMNGYCLQNKVFEARMVFDAMITKGCMPNVVSYNIL 370
Query: 348 LSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGI 407
++ Y A ++ A + F + G +PN Y TLI G + + E++ M+ G
Sbjct: 371 INGYCKAQRIDEARELFDEMSFRGLIPNTFNYNTLISGLCQAGRHCEARELFKDMQAQGC 430
Query: 408 KPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILL 453
P+ T ++D+ K D+A+ ++ M+ P+ +IL+
Sbjct: 431 SPDLVTCTILLDSLCKLGYLDNALRLFRAMQDSCLKPNLVTYDILI 476
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 88/304 (28%), Positives = 151/304 (49%), Gaps = 6/304 (1%)
Query: 88 IQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRY 147
+ S + N + +I + K G A +L M+K G P +V + +++ +
Sbjct: 181 VASGYQPNLHTYNTIIKGFCKIGKTTVAVGLLKKMDKAGGRPDIVIYNTIIDGLCKDRLV 240
Query: 148 KNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMF 207
A IF ++ G RP TY I++ +++ +EA +F ++ + PD F
Sbjct: 241 SEALDIFSEIKGKGVRPDVFTYSILMHGLCNSDQKEEASALFNEMMSLN---IMPDVVTF 297
Query: 208 HMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLM---SFETNYKEVSKIYDQMQR 264
++++ K G +A+ + +M E+GV+ + TYNSLM + E ++D M
Sbjct: 298 NILVDKLCKEGMLSEAQGIIKIMIEKGVEPNYATYNSLMNGYCLQNKVFEARMVFDAMIT 357
Query: 265 AGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQ 324
G P+VVSY +LIN Y KA+R +EA +F+EM G+ P YN L+ +G +
Sbjct: 358 KGCMPNVVSYNILINGYCKAQRIDEARELFDEMSFRGLIPNTFNYNTLISGLCQAGRHCE 417
Query: 325 ARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIK 384
AR +FK M+ CSPD+ + T +L + ++ A + FR ++ PN++TY LI+
Sbjct: 418 ARELFKDMQAQGCSPDLVTCTILLDSLCKLGYLDNALRLFRAMQDSCLKPNLVTYDILIR 477
Query: 385 GYAK 388
K
Sbjct: 478 AMYK 481
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 92/386 (23%), Positives = 162/386 (41%), Gaps = 14/386 (3%)
Query: 113 NKAEKVLSF--MNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQ 170
N + + SF M K P +V L+ A R Y ++ +R++ +
Sbjct: 64 NIEDALFSFNHMIHKHPLPCIVEFDKLLSALVRIKHYGTVLSLSKRIELLRIERDVFHFN 123
Query: 171 IILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALM 230
I++ F ++ + + F L K +PD F +I + +A + F M
Sbjct: 124 ILINCF---SRLQRVDFAFSVLGKIIKLGFEPDAVTFSSLINGLCFEDKFARAMEFFDEM 180
Query: 231 AERGVQQSTVTYNSLMSFETNYKEVSK------IYDQMQRAGLQPDVVSYALLINAYGKA 284
G Q + TYN+++ + ++ K + +M +AG +PD+V Y +I+ K
Sbjct: 181 VASGYQPNLHTYNTIIK---GFCKIGKTTVAVGLLKKMDKAGGRPDIVIYNTIIDGLCKD 237
Query: 285 RREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSY 344
R EAL +F E+ GVRP Y+IL+ S ++A +F M PD+ ++
Sbjct: 238 RLVSEALDIFSEIKGKGVRPDVFTYSILMHGLCNSDQKEEASALFNEMMSLNIMPDVVTF 297
Query: 345 TTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRV 404
++ + A+ + + + G PN TY +L+ GY N + + ++D M
Sbjct: 298 NILVDKLCKEGMLSEAQGIIKIMIEKGVEPNYATYNSLMNGYCLQNKVFEARMVFDAMIT 357
Query: 405 NGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNE 464
G PN + +++ Y K + D A + EM G P+ N L+S A E
Sbjct: 358 KGCMPNVVSYNILINGYCKAQRIDEARELFDEMSFRGLIPNTFNYNTLISGLCQAGRHCE 417
Query: 465 ANELLGNFNHPNNEPGINGLSISVDE 490
A EL + P + +I +D
Sbjct: 418 ARELFKDMQAQGCSPDLVTCTILLDS 443
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 56/241 (23%), Positives = 113/241 (46%)
Query: 250 TNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAY 309
TN ++ ++ M P +V + L++A + + L++ + + + +
Sbjct: 63 TNIEDALFSFNHMIHKHPLPCIVEFDKLLSALVRIKHYGTVLSLSKRIELLRIERDVFHF 122
Query: 310 NILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQ 369
NIL++ F+ VD A +V + + PD +++++++ A +FF +
Sbjct: 123 NILINCFSRLQRVDFAFSVLGKIIKLGFEPDAVTFSSLINGLCFEDKFARAMEFFDEMVA 182
Query: 370 DGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDS 429
G+ PN+ TY T+IKG+ K+ + + KM G +P+ I+ TI+D K++
Sbjct: 183 SGYQPNLHTYNTIIKGFCKIGKTTVAVGLLKKMDKAGGRPDIVIYNTIIDGLCKDRLVSE 242
Query: 430 AVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGINGLSISVD 489
A+ + E++ G PD +IL+ +D++ EA+ L N P + +I VD
Sbjct: 243 ALDIFSEIKGKGVRPDVFTYSILMHGLCNSDQKEEASALFNEMMSLNIMPDVVTFNILVD 302
Query: 490 E 490
+
Sbjct: 303 K 303
Score = 48.5 bits (114), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 48/87 (55%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N ++ LI+ + G +A ++ M +G +P +V+ T L+++ + G NA +F
Sbjct: 398 NTFNYNTLISGLCQAGRHCEARELFKDMQAQGCSPDLVTCTILLDSLCKLGYLDNALRLF 457
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANK 181
R MQ S +P+ +TY I+++ ++ K
Sbjct: 458 RAMQDSCLKPNLVTYDILIRAMYKSGK 484
>gi|147825385|emb|CAN75494.1| hypothetical protein VITISV_030525 [Vitis vinifera]
Length = 821
Score = 159 bits (401), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 98/365 (26%), Positives = 181/365 (49%), Gaps = 8/365 (2%)
Query: 101 MLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSS 160
+++ G++ + A ++L ++ + Y+ V + T ++ AY R G+Y+ A +F +M+ +
Sbjct: 179 LMVRILGRESQHSVALRLLDEISVEEYSLDVRAWTTILHAYSRIGKYERAITMFEKMRKT 238
Query: 161 GPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKS-PLKPDQKMFHMMIYMYKKAGG 219
G P+ +TY ++L ++ K + + LLDE +S L+ D+ +I + G
Sbjct: 239 GLSPTLVTYNVMLDVY---GKMGRSWNKILGLLDEMRSNGLEFDEFTCSTVISACGREGL 295
Query: 220 YEKARKLFALMAERGVQQSTVTYNSLMSFETN---YKEVSKIYDQMQRAGLQPDVVSYAL 276
++ARK FA + G T TYNSL+ Y E I +M++ PD+V+Y
Sbjct: 296 LDEARKFFARLKSEGYVAGTFTYNSLLQVFGKAGIYSEALSILKEMEKNNCPPDLVTYNE 355
Query: 277 LINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDR 336
L+ AY +A EE + M+ G+ P Y +++A+ +G D+A + F+ M+
Sbjct: 356 LVAAYVRAGFHEEGADFIDTMIRKGIMPNAITYTTVINAYGKAGKEDKALSFFRQMKESG 415
Query: 337 CSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMM 396
C P++C+Y +L S +E ++ +G PN +T+ T++ + +
Sbjct: 416 CVPNVCTYNAILGMLGKKSRLEEMIDMLCDMRSNGCAPNSVTWNTMLAMCGNKGMHKYVN 475
Query: 397 EIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILL-SL 455
++ +M+ G +PN+ F ++ AYG+ V Y+EM GF P N LL +L
Sbjct: 476 RVFREMKSCGFEPNRDTFNALIGAYGRCGSQIDVVKMYEEMIKAGFTPCVTTYNALLNAL 535
Query: 456 AKTAD 460
A+ D
Sbjct: 536 ARRGD 540
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 113/493 (22%), Positives = 214/493 (43%), Gaps = 46/493 (9%)
Query: 29 KNWRRLMNQIEEVGS-AVAVLRSERTRGQPLPKDLVLGTL---VRLKQLKKWNVVSEVLE 84
+ W +++ +G A+ E+ R L LV + V K + WN + +L+
Sbjct: 210 RAWTTILHAYSRIGKYERAITMFEKMRKTGLSPTLVTYNVMLDVYGKMGRSWNKILGLLD 269
Query: 85 WLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRG 144
+R + +F+E +I+A G++G ++A K + + +GY ++ +L++ +G+
Sbjct: 270 EMR-SNGLEFDEFTCSTVISACGREGLLDEARKFFARLKSEGYVAGTFTYNSLLQVFGKA 328
Query: 145 GRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQ 204
G Y A +I + M+ + P +TY ++ +V A +E + T++ + + P+
Sbjct: 329 GIYSEALSILKEMEKNNCPPDLVTYNELVAAYVRAGFHEEGADFIDTMI---RKGIMPNA 385
Query: 205 KMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSF---------------- 248
+ +I Y KAG +KA F M E G + TYN+++
Sbjct: 386 ITYTTVINAYGKAGKEDKALSFFRQMKESGCVPNVCTYNAILGMLGKKSRLEEMIDMLCD 445
Query: 249 ----------------------ETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARR 286
+ +K V++++ +M+ G +P+ ++ LI AYG+
Sbjct: 446 MRSNGCAPNSVTWNTMLAMCGNKGMHKYVNRVFREMKSCGFEPNRDTFNALIGAYGRCGS 505
Query: 287 EEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTT 346
+ + + ++EEM+ AG P YN LL+A A G + A +V M+ P+ SY+
Sbjct: 506 QIDVVKMYEEMIKAGFTPCVTTYNALLNALARRGDWEAAESVILDMKSKGFKPNETSYSL 565
Query: 347 MLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNG 406
ML+ Y + G EK + P+ I TL+ K L M + + +G
Sbjct: 566 MLNCYAKGGNGRGIEKIEEEIYNGHIFPSWILLRTLVLANFKRRALMGMERAFQEFCKHG 625
Query: 407 IKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEAN 466
KP+ +F +++ + KNK +D A + + G PD N L+ + E +
Sbjct: 626 YKPDLVLFNSMLSIFAKNKMYDRAHEMLRLIRESGLQPDLVTYNSLMDMYARGGECWKGE 685
Query: 467 ELLGNFNHPNNEP 479
E+L +P
Sbjct: 686 EILKGIQKSGGKP 698
Score = 128 bits (322), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 90/381 (23%), Positives = 171/381 (44%), Gaps = 41/381 (10%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
L+ AY + G + + M +KG P+ +++T ++ AYG+ G+ A + FR+M+ SG
Sbjct: 356 LVAAYVRAGFHEEGADFIDTMIRKGIMPNAITYTTVINAYGKAGKEDKALSFFRQMKESG 415
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
P+ TY IL + + ++ EE+ L D + P+ ++ M+ M G ++
Sbjct: 416 CVPNVCTYNAILGMLGKKSRL---EEMIDMLCDMRSNGCAPNSVTWNTMLAMCGNKGMHK 472
Query: 222 KARKLFALMAERGVQQSTVTYNSLMSFETNYK---EVSKIYDQMQRAGLQPDVVSYALLI 278
++F M G + + T+N+L+ +V K+Y++M +AG P V +Y L+
Sbjct: 473 YVNRVFREMKSCGFEPNRDTFNALIGAYGRCGSQIDVVKMYEEMIKAGFTPCVTTYNALL 532
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISG------------------ 320
NA + E A +V +M G +P +Y+++L+ +A G
Sbjct: 533 NALARRGDWEAAESVILDMKSKGFKPNETSYSLMLNCYAKGGNGRGIEKIEEEIYNGHIF 592
Query: 321 ----------MVDQARTVFKCMRR---DRCS----PDICSYTTMLSAYVNASDMEGAEKF 363
+ + R M R + C PD+ + +MLS + + A +
Sbjct: 593 PSWILLRTLVLANFKRRALMGMERAFQEFCKHGYKPDLVLFNSMLSIFAKNKMYDRAHEM 652
Query: 364 FRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGK 423
R +++ G P+++TY +L+ YA+ K EI ++ +G KP+ + T++ + +
Sbjct: 653 LRLIRESGLQPDLVTYNSLMDMYARGGECWKGEEILKGIQKSGGKPDLVSYNTVIKGFCR 712
Query: 424 NKDFDSAVVWYKEMESCGFPP 444
A+ EM G P
Sbjct: 713 QGLMQEAIRTLSEMTISGIRP 733
Score = 126 bits (316), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 80/315 (25%), Positives = 146/315 (46%), Gaps = 9/315 (2%)
Query: 172 ILKLFVEANKFKEAEEVFMTLLDE---EKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFA 228
+++L V + V + LLDE E+ L D + + +++ Y + G YE+A +F
Sbjct: 176 LVELMVRILGRESQHSVALRLLDEISVEEYSL--DVRAWTTILHAYSRIGKYERAITMFE 233
Query: 229 LMAERGVQQSTVTYNSLM----SFETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKA 284
M + G+ + VTYN ++ ++ ++ + D+M+ GL+ D + + +I+A G+
Sbjct: 234 KMRKTGLSPTLVTYNVMLDVYGKMGRSWNKILGLLDEMRSNGLEFDEFTCSTVISACGRE 293
Query: 285 RREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSY 344
+EA F + G YN LL F +G+ +A ++ K M ++ C PD+ +Y
Sbjct: 294 GLLDEARKFFARLKSEGYVAGTFTYNSLLQVFGKAGIYSEALSILKEMEKNNCPPDLVTY 353
Query: 345 TTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRV 404
+++AYV A E F + + G +PN ITY T+I Y K +K + + +M+
Sbjct: 354 NELVAAYVRAGFHEEGADFIDTMIRKGIMPNAITYTTVINAYGKAGKEDKALSFFRQMKE 413
Query: 405 NGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNE 464
+G PN + I+ GK + + +M S G P+ N +L++
Sbjct: 414 SGCVPNVCTYNAILGMLGKKSRLEEMIDMLCDMRSNGCAPNSVTWNTMLAMCGNKGMHKY 473
Query: 465 ANELLGNFNHPNNEP 479
N + EP
Sbjct: 474 VNRVFREMKSCGFEP 488
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 78/273 (28%), Positives = 132/273 (48%), Gaps = 10/273 (3%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
L+ A ++GD+ AE V+ M KG+ P+ S++ ++ Y +GG + E I + +
Sbjct: 531 LLNALARRGDWEAAESVILDMKSKGFKPNETSYSLMLNCYAKGGNGRGIEKIEEEIYNGH 590
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEE--KSPLKPDQKMFHMMIYMYKKAGG 219
PS I+L+ V AN FK + M +E K KPD +F+ M+ ++ K
Sbjct: 591 IFPS----WILLRTLVLAN-FKRRALMGMERAFQEFCKHGYKPDLVLFNSMLSIFAKNKM 645
Query: 220 YEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSK---IYDQMQRAGLQPDVVSYAL 276
Y++A ++ L+ E G+Q VTYNSLM E K I +Q++G +PD+VSY
Sbjct: 646 YDRAHEMLRLIRESGLQPDLVTYNSLMDMYARGGECWKGEEILKGIQKSGGKPDLVSYNT 705
Query: 277 LINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDR 336
+I + + +EA+ EM +G+RP YN + ++ GM + V M +
Sbjct: 706 VIKGFCRQGLMQEAIRTLSEMTISGIRPCIVTYNTFVAGYSGKGMFSEVEEVISYMIQHD 765
Query: 337 CSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQ 369
C P+ +Y ++ Y + A F + +
Sbjct: 766 CRPNELTYKIVVDGYCKGKKYKEAMDFVSNITE 798
Score = 118 bits (295), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 79/347 (22%), Positives = 156/347 (44%), Gaps = 20/347 (5%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + + ++ G +G +V M G+ P+ + AL+ AYGR G + ++
Sbjct: 454 NSVTWNTMLAMCGNKGMHKYVNRVFREMKSCGFEPNRDTFNALIGAYGRCGSQIDVVKMY 513
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
M +G P TY +L ++ AE V +LD + KP++ + +M+ Y
Sbjct: 514 EEMIKAGFTPCVTTYNALLNALARRGDWEAAESV---ILDMKSKGFKPNETSYSLMLNCY 570
Query: 215 KKAG---GYEKARK------LF-ALMAERGVQQSTVTYNSLMSFETNYKEVSKIYDQMQR 264
K G G EK + +F + + R + + +LM E ++E K
Sbjct: 571 AKGGNGRGIEKIEEEIYNGHIFPSWILLRTLVLANFKRRALMGMERAFQEFCK------- 623
Query: 265 AGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQ 324
G +PD+V + +++ + K + + A + + ++G++P YN L+D +A G +
Sbjct: 624 HGYKPDLVLFNSMLSIFAKNKMYDRAHEMLRLIRESGLQPDLVTYNSLMDMYARGGECWK 683
Query: 325 ARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIK 384
+ K +++ PD+ SY T++ + M+ A + + G P ++TY T +
Sbjct: 684 GEEILKGIQKSGGKPDLVSYNTVIKGFCRQGLMQEAIRTLSEMTISGIRPCIVTYNTFVA 743
Query: 385 GYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAV 431
GY+ ++ E+ M + +PN+ + ++D Y K K + A+
Sbjct: 744 GYSGKGMFSEVEEVISYMIQHDCRPNELTYKIVVDGYCKGKKYKEAM 790
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 48/97 (49%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
+I + +QG +A + LS M G P +V++ + Y G + E + M
Sbjct: 706 VIKGFCRQGLMQEAIRTLSEMTISGIRPCIVTYNTFVAGYSGKGMFSEVEEVISYMIQHD 765
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKS 198
RP+ LTY+I++ + + K+KEA + + + +KS
Sbjct: 766 CRPNELTYKIVVDGYCKGKKYKEAMDFVSNITEMDKS 802
>gi|15226907|ref|NP_181058.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75100538|sp|O82178.1|PP186_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g35130
gi|3668091|gb|AAC61823.1| hypothetical protein [Arabidopsis thaliana]
gi|330253974|gb|AEC09068.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 591
Score = 159 bits (401), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 111/451 (24%), Positives = 210/451 (46%), Gaps = 45/451 (9%)
Query: 61 DLVLGTLVRLKQLKKWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLS 120
D ++ V+L+ KKW+ + V EW+ +S + + + F +LI AYG++ + +AE +
Sbjct: 120 DDLINVSVQLRLNKKWDSIILVCEWILRKSSFQPDVICFNLLIDAYGQKFQYKEAESLYV 179
Query: 121 FMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQI----ILKLF 176
+ + Y P+ ++ L++AY G + AE + MQ+ P + + I L
Sbjct: 180 QLLESRYVPTEDTYALLIKAYCMAGLIERAEVVLVEMQNHHVSPKTIGVTVYNAYIEGLM 239
Query: 177 VEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQ 236
+EA +VF + ++ KP + +++MI +Y KA + KL+ M +
Sbjct: 240 KRKGNTEEAIDVFQRM---KRDRCKPTTETYNLMINLYGKASKSYMSWKLYCEMRSHQCK 296
Query: 237 QSTVTYNSLM---SFETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAV 293
+ TY +L+ + E ++ +I++Q+Q GL+PDV Y L+ +Y +A A +
Sbjct: 297 PNICTYTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEI 356
Query: 294 FEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVN 353
F M G P +YNI++DA+ +G+ A VF+ M+R +P + S+ +LSAY
Sbjct: 357 FSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSK 416
Query: 354 ASDMEGAEKFFRRLKQDGFVP-----------------------------------NVIT 378
A D+ E + + ++G P ++ T
Sbjct: 417 ARDVTKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEMENGPCTADIST 476
Query: 379 YGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEME 438
Y LI Y K LE++ E++ +++ +P+ +T+ + AY + K + + ++EM
Sbjct: 477 YNILINIYGKAGFLERIEELFVELKEKNFRPDVVTWTSRIGAYSRKKLYVKCLEVFEEMI 536
Query: 439 SCGFPPDQKAKNILLSLAKTADERNEANELL 469
G PD +LLS + ++ + +L
Sbjct: 537 DSGCAPDGGTAKVLLSACSSEEQVEQVTSVL 567
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 95/368 (25%), Positives = 178/368 (48%), Gaps = 10/368 (2%)
Query: 121 FMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEAN 180
+ K + P V+ L++AYG+ +YK AE+++ ++ S P+ TY +++K + A
Sbjct: 145 ILRKSSFQPDVICFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTEDTYALLIKAYCMAG 204
Query: 181 KFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIY-MYKKAGGYEKARKLFALMAERGVQQST 239
+ AE V + + + SP +++ I + K+ G E+A +F M + +T
Sbjct: 205 LIERAEVVLVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRMKRDRCKPTT 264
Query: 240 VTYNSLMSFETNYKEVSK------IYDQMQRAGLQPDVVSYALLINAYGKARREEEALAV 293
TYN +++ Y + SK +Y +M+ +P++ +Y L+NA+ + E+A +
Sbjct: 265 ETYNLMINL---YGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEI 321
Query: 294 FEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVN 353
FE++ + G+ P YN L+++++ +G A +F M+ C PD SY M+ AY
Sbjct: 322 FEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGR 381
Query: 354 ASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTI 413
A AE F +K+ G P + ++ L+ Y+K ++ K I +M NG++P+ +
Sbjct: 382 AGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPDTFV 441
Query: 414 FTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFN 473
++++ YG+ F EME+ D NIL+++ A EL
Sbjct: 442 LNSMLNLYGRLGQFTKMEKILAEMENGPCTADISTYNILINIYGKAGFLERIEELFVELK 501
Query: 474 HPNNEPGI 481
N P +
Sbjct: 502 EKNFRPDV 509
Score = 108 bits (271), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 74/286 (25%), Positives = 131/286 (45%), Gaps = 6/286 (2%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + L+ A+ ++G KAE++ + + G P V + ALME+Y R G A IF
Sbjct: 298 NICTYTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIF 357
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
MQ G P +Y I++ + A +AE VF + ++ + P K +++ Y
Sbjct: 358 SLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEM---KRLGIAPTMKSHMLLLSAY 414
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFE---TNYKEVSKIYDQMQRAGLQPDV 271
KA K + M+E GV+ T NS+++ + ++ KI +M+ D+
Sbjct: 415 SKARDVTKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEMENGPCTADI 474
Query: 272 VSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKC 331
+Y +LIN YGKA E +F E+ + RP + + A++ + + VF+
Sbjct: 475 STYNILINIYGKAGFLERIEELFVELKEKNFRPDVVTWTSRIGAYSRKKLYVKCLEVFEE 534
Query: 332 MRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVI 377
M C+PD + +LSA + +E R + + V +++
Sbjct: 535 MIDSGCAPDGGTAKVLLSACSSEEQVEQVTSVLRTMHKGVTVSSLV 580
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 62/233 (26%), Positives = 117/233 (50%), Gaps = 6/233 (2%)
Query: 262 MQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGM 321
++++ QPDV+ + LLI+AYG+ + +EA +++ ++L++ PT Y +L+ A+ ++G+
Sbjct: 146 LRKSSFQPDVICFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTEDTYALLIKAYCMAGL 205
Query: 322 VDQARTVFKCMRRDRCSPDICSYTTMLSAYVNA-----SDMEGAEKFFRRLKQDGFVPNV 376
+++A V M+ SP T+ +AY+ + E A F+R+K+D P
Sbjct: 206 IERAEVVLVEMQNHHVSPKTIG-VTVYNAYIEGLMKRKGNTEEAIDVFQRMKRDRCKPTT 264
Query: 377 ITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKE 436
TY +I Y K + ++Y +MR + KPN +T +++A+ + + A +++
Sbjct: 265 ETYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQ 324
Query: 437 MESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGINGLSISVD 489
++ G PD N L+ A A E+ H EP +I VD
Sbjct: 325 LQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVD 377
Score = 102 bits (254), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 67/306 (21%), Positives = 139/306 (45%), Gaps = 6/306 (1%)
Query: 101 MLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSS 160
++I YGK + K+ M P++ ++TAL+ A+ R G + AE IF ++Q
Sbjct: 269 LMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQLQED 328
Query: 161 GPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGY 220
G P Y +++ + A A E+F + + +PD+ +++M+ Y +AG +
Sbjct: 329 GLEPDVYVYNALMESYSRAGYPYGAAEIFSLM---QHMGCEPDRASYNIMVDAYGRAGLH 385
Query: 221 EKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSK---IYDQMQRAGLQPDVVSYALL 277
A +F M G+ + ++ L+S + ++V+K I +M G++PD +
Sbjct: 386 SDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPDTFVLNSM 445
Query: 278 INAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRC 337
+N YG+ + + + EM + YNIL++ + +G +++ +F ++
Sbjct: 446 LNLYGRLGQFTKMEKILAEMENGPCTADISTYNILINIYGKAGFLERIEELFVELKEKNF 505
Query: 338 SPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMME 397
PD+ ++T+ + AY + F + G P+ T L+ + +E++
Sbjct: 506 RPDVVTWTSRIGAYSRKKLYVKCLEVFEEMIDSGCAPDGGTAKVLLSACSSEEQVEQVTS 565
Query: 398 IYDKMR 403
+ M
Sbjct: 566 VLRTMH 571
>gi|12583808|gb|AAG59660.1|AC084319_18 putative membrane-associated salt-inducible protein [Oryza sativa
Japonica Group]
Length = 772
Score = 158 bits (400), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 114/470 (24%), Positives = 213/470 (45%), Gaps = 16/470 (3%)
Query: 9 FMQKRRKVEVFKDAADEAGKKNWRRLMNQIEEVGS---AVAVLRSERTRGQPLPKDLVL- 64
F R +E N ++N I E G AV +LR G D+V
Sbjct: 162 FRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFG--CEADIVSY 219
Query: 65 -GTLVRLKQLKKWNVVSEVL-EWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFM 122
L L K+W V E++ E +R+ N + F LI + G F + +VL+ M
Sbjct: 220 NAVLKGLCMAKRWGDVEELMDEMVRVDC--APNIVTFNTLIGYLCRNGLFERVHEVLAQM 277
Query: 123 NKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKF 182
++ G P + + +++ + G + A I RM S G +P+ + Y +LK A ++
Sbjct: 278 SEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERW 337
Query: 183 KEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTY 242
KEAEE+ + ++ PL D F++++ + + G ++ +L M G +TY
Sbjct: 338 KEAEELLSEMFQKD-CPL--DDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITY 394
Query: 243 NSLMSF---ETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLD 299
++++ E E + M G +P+ VSY +++ A R +A + +M+
Sbjct: 395 TTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQ 454
Query: 300 AGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEG 359
G P +N L++ G+V+QA + K M + CSPD+ SY+T++ A E
Sbjct: 455 QGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEE 514
Query: 360 AEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMD 419
A + + G PN I Y ++ ++ + K+++++D ++ I+ + ++ ++
Sbjct: 515 ALELLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQMFDNIKDTTIRSDAVLYNAVIS 574
Query: 420 AYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELL 469
+ K + D A+ ++ M S G P++ +L+ + EA ELL
Sbjct: 575 SLCKRWETDRAIDFFAYMVSNGCMPNESTYTMLIKGLASEGLAKEAQELL 624
Score = 125 bits (313), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 95/414 (22%), Positives = 174/414 (42%), Gaps = 43/414 (10%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKN----- 149
N F ++ +G A +VL M+ KG AP + ++EA R G ++N
Sbjct: 110 NAYTFFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVL 169
Query: 150 ------------------------------AEAIFRRMQSSGPRPSALTYQIILKLFVEA 179
A + R++ G ++Y +LK A
Sbjct: 170 EAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMA 229
Query: 180 NKFKEAEEVFMTLLDE-EKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQS 238
++ + EE L+DE + P+ F+ +I + G +E+ ++ A M+E G
Sbjct: 230 KRWGDVEE----LMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPD 285
Query: 239 TVTYNSL---MSFETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFE 295
Y ++ + E + + ++I ++M GL+P+VV Y ++ A R +EA +
Sbjct: 286 IRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLS 345
Query: 296 EMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNAS 355
EM +NIL+D F +G+VD+ + + M C PD+ +YTT+++ +
Sbjct: 346 EMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEG 405
Query: 356 DMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFT 415
++ A + + G PN ++Y ++KG E+ +M G PN F
Sbjct: 406 LIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFN 465
Query: 416 TIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELL 469
T+++ K + A+ K+M G PD + + ++ A + EA ELL
Sbjct: 466 TLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELL 519
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 68/326 (20%), Positives = 135/326 (41%), Gaps = 44/326 (13%)
Query: 131 VVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFM 190
VV++ A++ Y R G+ A + + P+A T+ +++ + +A EV
Sbjct: 79 VVAYNAMVAGYCRAGQLAAARRLAAAVPVP---PNAYTFFPVVRGLCTRGRIADALEVLD 135
Query: 191 TLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSF-- 248
+ + +P+ P M+H+++ ++GG+ + ++ M +G T N +++
Sbjct: 136 EMSFKGCAPIPP---MYHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAIC 192
Query: 249 -ETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHK 307
+ E + ++ G + D+VSY ++ A+R + EE++D VR
Sbjct: 193 EQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDV----EELMDEMVR---- 244
Query: 308 AYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRL 367
VD C+P+I ++ T++ E + ++
Sbjct: 245 --------------VD-------------CAPNIVTFNTLIGYLCRNGLFERVHEVLAQM 277
Query: 368 KQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDF 427
+ G P++ Y T+I G K +LE EI ++M G+KPN + T++ + +
Sbjct: 278 SEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERW 337
Query: 428 DSAVVWYKEMESCGFPPDQKAKNILL 453
A EM P D NIL+
Sbjct: 338 KEAEELLSEMFQKDCPLDDVTFNILV 363
>gi|225445998|ref|XP_002267263.1| PREDICTED: pentatricopeptide repeat-containing protein At2g18940
[Vitis vinifera]
gi|297735424|emb|CBI17864.3| unnamed protein product [Vitis vinifera]
Length = 821
Score = 158 bits (400), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 98/365 (26%), Positives = 181/365 (49%), Gaps = 8/365 (2%)
Query: 101 MLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSS 160
+++ G++ + A ++L ++ + Y+ V + T ++ AY R G+Y+ A +F +M+ +
Sbjct: 179 LMVRILGRESQHSVALRLLDEISVEEYSLDVRAWTTILHAYSRIGKYERAITMFEKMRKT 238
Query: 161 GPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKS-PLKPDQKMFHMMIYMYKKAGG 219
G P+ +TY ++L ++ K + + LLDE +S L+ D+ +I + G
Sbjct: 239 GLSPTLVTYNVMLDVY---GKMGRSWNKILGLLDEMRSNGLEFDEFTCSTVISACGREGL 295
Query: 220 YEKARKLFALMAERGVQQSTVTYNSLMSFETN---YKEVSKIYDQMQRAGLQPDVVSYAL 276
++ARK FA + G T TYNSL+ Y E I +M++ PD+V+Y
Sbjct: 296 LDEARKFFARLKSEGYVAGTFTYNSLLQVFGKAGIYSEALSILKEMEKNNCPPDLVTYNE 355
Query: 277 LINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDR 336
L+ AY +A EE + M+ G+ P Y +++A+ +G D+A + F+ M+
Sbjct: 356 LVAAYVRAGFHEEGADFIDTMIRKGIMPNAITYTTVINAYGKAGKEDKALSFFRQMKESG 415
Query: 337 CSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMM 396
C P++C+Y +L S +E ++ +G PN +T+ T++ + +
Sbjct: 416 CVPNVCTYNAILGMLGKKSRLEEMIDMLCDMRSNGCAPNSVTWNTMLAMCGNKGMHKYVN 475
Query: 397 EIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILL-SL 455
++ +M+ G +PN+ F ++ AYG+ V Y+EM GF P N LL +L
Sbjct: 476 RVFREMKSCGFEPNRDTFNALIGAYGRCGSQIDVVKMYEEMIKAGFTPCVTTYNALLNAL 535
Query: 456 AKTAD 460
A+ D
Sbjct: 536 ARRGD 540
Score = 155 bits (393), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 113/493 (22%), Positives = 214/493 (43%), Gaps = 46/493 (9%)
Query: 29 KNWRRLMNQIEEVGS-AVAVLRSERTRGQPLPKDLVLGTL---VRLKQLKKWNVVSEVLE 84
+ W +++ +G A+ E+ R L LV + V K + WN + +L+
Sbjct: 210 RAWTTILHAYSRIGKYERAITMFEKMRKTGLSPTLVTYNVMLDVYGKMGRSWNKILGLLD 269
Query: 85 WLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRG 144
+R + +F+E +I+A G++G ++A K + + +GY ++ +L++ +G+
Sbjct: 270 EMR-SNGLEFDEFTCSTVISACGREGLLDEARKFFARLKSEGYVAGTFTYNSLLQVFGKA 328
Query: 145 GRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQ 204
G Y A +I + M+ + P +TY ++ +V A +E + T++ + + P+
Sbjct: 329 GIYSEALSILKEMEKNNCPPDLVTYNELVAAYVRAGFHEEGADFIDTMI---RKGIMPNA 385
Query: 205 KMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSF---------------- 248
+ +I Y KAG +KA F M E G + TYN+++
Sbjct: 386 ITYTTVINAYGKAGKEDKALSFFRQMKESGCVPNVCTYNAILGMLGKKSRLEEMIDMLCD 445
Query: 249 ----------------------ETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARR 286
+ +K V++++ +M+ G +P+ ++ LI AYG+
Sbjct: 446 MRSNGCAPNSVTWNTMLAMCGNKGMHKYVNRVFREMKSCGFEPNRDTFNALIGAYGRCGS 505
Query: 287 EEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTT 346
+ + + ++EEM+ AG P YN LL+A A G + A +V M+ P+ SY+
Sbjct: 506 QIDVVKMYEEMIKAGFTPCVTTYNALLNALARRGDWEAAESVILDMKSKGFKPNETSYSL 565
Query: 347 MLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNG 406
ML+ Y + G EK + P+ I TL+ K L M + + +G
Sbjct: 566 MLNCYAKGGNGRGIEKIEEEIYNGHIFPSWILLRTLVLANFKRRALMGMERAFQEFCKHG 625
Query: 407 IKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEAN 466
KP+ +F +++ + KNK +D A + + G PD N L+ + E +
Sbjct: 626 YKPDLVLFNSMLSIFAKNKMYDRAHEMLRLIRESGLQPDLVTYNSLMDMYARGGECWKGE 685
Query: 467 ELLGNFNHPNNEP 479
E+L +P
Sbjct: 686 EILKGIQKSGGKP 698
Score = 128 bits (322), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 90/381 (23%), Positives = 171/381 (44%), Gaps = 41/381 (10%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
L+ AY + G + + M +KG P+ +++T ++ AYG+ G+ A + FR+M+ SG
Sbjct: 356 LVAAYVRAGFHEEGADFIDTMIRKGIMPNAITYTTVINAYGKAGKEDKALSFFRQMKESG 415
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
P+ TY IL + + ++ EE+ L D + P+ ++ M+ M G ++
Sbjct: 416 CVPNVCTYNAILGMLGKKSRL---EEMIDMLCDMRSNGCAPNSVTWNTMLAMCGNKGMHK 472
Query: 222 KARKLFALMAERGVQQSTVTYNSLMSFETNYK---EVSKIYDQMQRAGLQPDVVSYALLI 278
++F M G + + T+N+L+ +V K+Y++M +AG P V +Y L+
Sbjct: 473 YVNRVFREMKSCGFEPNRDTFNALIGAYGRCGSQIDVVKMYEEMIKAGFTPCVTTYNALL 532
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISG------------------ 320
NA + E A +V +M G +P +Y+++L+ +A G
Sbjct: 533 NALARRGDWEAAESVILDMKSKGFKPNETSYSLMLNCYAKGGNGRGIEKIEEEIYNGHIF 592
Query: 321 ----------MVDQARTVFKCMRR---DRCS----PDICSYTTMLSAYVNASDMEGAEKF 363
+ + R M R + C PD+ + +MLS + + A +
Sbjct: 593 PSWILLRTLVLANFKRRALMGMERAFQEFCKHGYKPDLVLFNSMLSIFAKNKMYDRAHEM 652
Query: 364 FRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGK 423
R +++ G P+++TY +L+ YA+ K EI ++ +G KP+ + T++ + +
Sbjct: 653 LRLIRESGLQPDLVTYNSLMDMYARGGECWKGEEILKGIQKSGGKPDLVSYNTVIKGFCR 712
Query: 424 NKDFDSAVVWYKEMESCGFPP 444
A+ EM G P
Sbjct: 713 QGLMQEAIRTLSEMTISGIRP 733
Score = 126 bits (316), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 80/315 (25%), Positives = 146/315 (46%), Gaps = 9/315 (2%)
Query: 172 ILKLFVEANKFKEAEEVFMTLLDE---EKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFA 228
+++L V + V + LLDE E+ L D + + +++ Y + G YE+A +F
Sbjct: 176 LVELMVRILGRESQHSVALRLLDEISVEEYSL--DVRAWTTILHAYSRIGKYERAITMFE 233
Query: 229 LMAERGVQQSTVTYNSLM----SFETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKA 284
M + G+ + VTYN ++ ++ ++ + D+M+ GL+ D + + +I+A G+
Sbjct: 234 KMRKTGLSPTLVTYNVMLDVYGKMGRSWNKILGLLDEMRSNGLEFDEFTCSTVISACGRE 293
Query: 285 RREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSY 344
+EA F + G YN LL F +G+ +A ++ K M ++ C PD+ +Y
Sbjct: 294 GLLDEARKFFARLKSEGYVAGTFTYNSLLQVFGKAGIYSEALSILKEMEKNNCPPDLVTY 353
Query: 345 TTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRV 404
+++AYV A E F + + G +PN ITY T+I Y K +K + + +M+
Sbjct: 354 NELVAAYVRAGFHEEGADFIDTMIRKGIMPNAITYTTVINAYGKAGKEDKALSFFRQMKE 413
Query: 405 NGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNE 464
+G PN + I+ GK + + +M S G P+ N +L++
Sbjct: 414 SGCVPNVCTYNAILGMLGKKSRLEEMIDMLCDMRSNGCAPNSVTWNTMLAMCGNKGMHKY 473
Query: 465 ANELLGNFNHPNNEP 479
N + EP
Sbjct: 474 VNRVFREMKSCGFEP 488
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 78/273 (28%), Positives = 132/273 (48%), Gaps = 10/273 (3%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
L+ A ++GD+ AE V+ M KG+ P+ S++ ++ Y +GG + E I + +
Sbjct: 531 LLNALARRGDWEAAESVILDMKSKGFKPNETSYSLMLNCYAKGGNGRGIEKIEEEIYNGH 590
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEE--KSPLKPDQKMFHMMIYMYKKAGG 219
PS I+L+ V AN FK + M +E K KPD +F+ M+ ++ K
Sbjct: 591 IFPS----WILLRTLVLAN-FKRRALMGMERAFQEFCKHGYKPDLVLFNSMLSIFAKNKM 645
Query: 220 YEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSK---IYDQMQRAGLQPDVVSYAL 276
Y++A ++ L+ E G+Q VTYNSLM E K I +Q++G +PD+VSY
Sbjct: 646 YDRAHEMLRLIRESGLQPDLVTYNSLMDMYARGGECWKGEEILKGIQKSGGKPDLVSYNT 705
Query: 277 LINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDR 336
+I + + +EA+ EM +G+RP YN + ++ GM + V M +
Sbjct: 706 VIKGFCRQGLMQEAIRTLSEMTISGIRPCIVTYNTFVAGYSGKGMFSEVEEVISYMIQHD 765
Query: 337 CSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQ 369
C P+ +Y ++ Y + A F + +
Sbjct: 766 CRPNELTYKIVVDGYCKGKKYKEAMDFVSNITE 798
Score = 118 bits (295), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 79/347 (22%), Positives = 156/347 (44%), Gaps = 20/347 (5%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + + ++ G +G +V M G+ P+ + AL+ AYGR G + ++
Sbjct: 454 NSVTWNTMLAMCGNKGMHKYVNRVFREMKSCGFEPNRDTFNALIGAYGRCGSQIDVVKMY 513
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
M +G P TY +L ++ AE V +LD + KP++ + +M+ Y
Sbjct: 514 EEMIKAGFTPCVTTYNALLNALARRGDWEAAESV---ILDMKSKGFKPNETSYSLMLNCY 570
Query: 215 KKAG---GYEKARK------LF-ALMAERGVQQSTVTYNSLMSFETNYKEVSKIYDQMQR 264
K G G EK + +F + + R + + +LM E ++E K
Sbjct: 571 AKGGNGRGIEKIEEEIYNGHIFPSWILLRTLVLANFKRRALMGMERAFQEFCK------- 623
Query: 265 AGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQ 324
G +PD+V + +++ + K + + A + + ++G++P YN L+D +A G +
Sbjct: 624 HGYKPDLVLFNSMLSIFAKNKMYDRAHEMLRLIRESGLQPDLVTYNSLMDMYARGGECWK 683
Query: 325 ARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIK 384
+ K +++ PD+ SY T++ + M+ A + + G P ++TY T +
Sbjct: 684 GEEILKGIQKSGGKPDLVSYNTVIKGFCRQGLMQEAIRTLSEMTISGIRPCIVTYNTFVA 743
Query: 385 GYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAV 431
GY+ ++ E+ M + +PN+ + ++D Y K K + A+
Sbjct: 744 GYSGKGMFSEVEEVISYMIQHDCRPNELTYKIVVDGYCKGKKYKEAM 790
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 48/97 (49%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
+I + +QG +A + LS M G P +V++ + Y G + E + M
Sbjct: 706 VIKGFCRQGLMQEAIRTLSEMTISGIRPCIVTYNTFVAGYSGKGMFSEVEEVISYMIQHD 765
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKS 198
RP+ LTY+I++ + + K+KEA + + + +KS
Sbjct: 766 CRPNELTYKIVVDGYCKGKKYKEAMDFVSNITEMDKS 802
>gi|334184699|ref|NP_001189682.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|330253975|gb|AEC09069.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 613
Score = 158 bits (399), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 111/451 (24%), Positives = 210/451 (46%), Gaps = 45/451 (9%)
Query: 61 DLVLGTLVRLKQLKKWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLS 120
D ++ V+L+ KKW+ + V EW+ +S + + + F +LI AYG++ + +AE +
Sbjct: 142 DDLINVSVQLRLNKKWDSIILVCEWILRKSSFQPDVICFNLLIDAYGQKFQYKEAESLYV 201
Query: 121 FMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQI----ILKLF 176
+ + Y P+ ++ L++AY G + AE + MQ+ P + + I L
Sbjct: 202 QLLESRYVPTEDTYALLIKAYCMAGLIERAEVVLVEMQNHHVSPKTIGVTVYNAYIEGLM 261
Query: 177 VEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQ 236
+EA +VF + ++ KP + +++MI +Y KA + KL+ M +
Sbjct: 262 KRKGNTEEAIDVFQRM---KRDRCKPTTETYNLMINLYGKASKSYMSWKLYCEMRSHQCK 318
Query: 237 QSTVTYNSLM---SFETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAV 293
+ TY +L+ + E ++ +I++Q+Q GL+PDV Y L+ +Y +A A +
Sbjct: 319 PNICTYTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEI 378
Query: 294 FEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVN 353
F M G P +YNI++DA+ +G+ A VF+ M+R +P + S+ +LSAY
Sbjct: 379 FSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSK 438
Query: 354 ASDMEGAEKFFRRLKQDGFVP-----------------------------------NVIT 378
A D+ E + + ++G P ++ T
Sbjct: 439 ARDVTKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEMENGPCTADIST 498
Query: 379 YGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEME 438
Y LI Y K LE++ E++ +++ +P+ +T+ + AY + K + + ++EM
Sbjct: 499 YNILINIYGKAGFLERIEELFVELKEKNFRPDVVTWTSRIGAYSRKKLYVKCLEVFEEMI 558
Query: 439 SCGFPPDQKAKNILLSLAKTADERNEANELL 469
G PD +LLS + ++ + +L
Sbjct: 559 DSGCAPDGGTAKVLLSACSSEEQVEQVTSVL 589
Score = 149 bits (375), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 95/368 (25%), Positives = 178/368 (48%), Gaps = 10/368 (2%)
Query: 121 FMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEAN 180
+ K + P V+ L++AYG+ +YK AE+++ ++ S P+ TY +++K + A
Sbjct: 167 ILRKSSFQPDVICFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTEDTYALLIKAYCMAG 226
Query: 181 KFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIY-MYKKAGGYEKARKLFALMAERGVQQST 239
+ AE V + + + SP +++ I + K+ G E+A +F M + +T
Sbjct: 227 LIERAEVVLVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRMKRDRCKPTT 286
Query: 240 VTYNSLMSFETNYKEVSK------IYDQMQRAGLQPDVVSYALLINAYGKARREEEALAV 293
TYN +++ Y + SK +Y +M+ +P++ +Y L+NA+ + E+A +
Sbjct: 287 ETYNLMINL---YGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEI 343
Query: 294 FEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVN 353
FE++ + G+ P YN L+++++ +G A +F M+ C PD SY M+ AY
Sbjct: 344 FEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGR 403
Query: 354 ASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTI 413
A AE F +K+ G P + ++ L+ Y+K ++ K I +M NG++P+ +
Sbjct: 404 AGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPDTFV 463
Query: 414 FTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFN 473
++++ YG+ F EME+ D NIL+++ A EL
Sbjct: 464 LNSMLNLYGRLGQFTKMEKILAEMENGPCTADISTYNILINIYGKAGFLERIEELFVELK 523
Query: 474 HPNNEPGI 481
N P +
Sbjct: 524 EKNFRPDV 531
Score = 108 bits (270), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 74/286 (25%), Positives = 131/286 (45%), Gaps = 6/286 (2%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + L+ A+ ++G KAE++ + + G P V + ALME+Y R G A IF
Sbjct: 320 NICTYTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIF 379
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
MQ G P +Y I++ + A +AE VF + ++ + P K +++ Y
Sbjct: 380 SLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEM---KRLGIAPTMKSHMLLLSAY 436
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFE---TNYKEVSKIYDQMQRAGLQPDV 271
KA K + M+E GV+ T NS+++ + ++ KI +M+ D+
Sbjct: 437 SKARDVTKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEMENGPCTADI 496
Query: 272 VSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKC 331
+Y +LIN YGKA E +F E+ + RP + + A++ + + VF+
Sbjct: 497 STYNILINIYGKAGFLERIEELFVELKEKNFRPDVVTWTSRIGAYSRKKLYVKCLEVFEE 556
Query: 332 MRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVI 377
M C+PD + +LSA + +E R + + V +++
Sbjct: 557 MIDSGCAPDGGTAKVLLSACSSEEQVEQVTSVLRTMHKGVTVSSLV 602
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 62/233 (26%), Positives = 117/233 (50%), Gaps = 6/233 (2%)
Query: 262 MQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGM 321
++++ QPDV+ + LLI+AYG+ + +EA +++ ++L++ PT Y +L+ A+ ++G+
Sbjct: 168 LRKSSFQPDVICFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTEDTYALLIKAYCMAGL 227
Query: 322 VDQARTVFKCMRRDRCSPDICSYTTMLSAYVNA-----SDMEGAEKFFRRLKQDGFVPNV 376
+++A V M+ SP T+ +AY+ + E A F+R+K+D P
Sbjct: 228 IERAEVVLVEMQNHHVSPKTIG-VTVYNAYIEGLMKRKGNTEEAIDVFQRMKRDRCKPTT 286
Query: 377 ITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKE 436
TY +I Y K + ++Y +MR + KPN +T +++A+ + + A +++
Sbjct: 287 ETYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQ 346
Query: 437 MESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGINGLSISVD 489
++ G PD N L+ A A E+ H EP +I VD
Sbjct: 347 LQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVD 399
Score = 102 bits (253), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 67/306 (21%), Positives = 139/306 (45%), Gaps = 6/306 (1%)
Query: 101 MLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSS 160
++I YGK + K+ M P++ ++TAL+ A+ R G + AE IF ++Q
Sbjct: 291 LMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQLQED 350
Query: 161 GPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGY 220
G P Y +++ + A A E+F + + +PD+ +++M+ Y +AG +
Sbjct: 351 GLEPDVYVYNALMESYSRAGYPYGAAEIFSLM---QHMGCEPDRASYNIMVDAYGRAGLH 407
Query: 221 EKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSK---IYDQMQRAGLQPDVVSYALL 277
A +F M G+ + ++ L+S + ++V+K I +M G++PD +
Sbjct: 408 SDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPDTFVLNSM 467
Query: 278 INAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRC 337
+N YG+ + + + EM + YNIL++ + +G +++ +F ++
Sbjct: 468 LNLYGRLGQFTKMEKILAEMENGPCTADISTYNILINIYGKAGFLERIEELFVELKEKNF 527
Query: 338 SPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMME 397
PD+ ++T+ + AY + F + G P+ T L+ + +E++
Sbjct: 528 RPDVVTWTSRIGAYSRKKLYVKCLEVFEEMIDSGCAPDGGTAKVLLSACSSEEQVEQVTS 587
Query: 398 IYDKMR 403
+ M
Sbjct: 588 VLRTMH 593
>gi|302784330|ref|XP_002973937.1| hypothetical protein SELMODRAFT_100758 [Selaginella moellendorffii]
gi|300158269|gb|EFJ24892.1| hypothetical protein SELMODRAFT_100758 [Selaginella moellendorffii]
Length = 823
Score = 158 bits (399), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 96/375 (25%), Positives = 183/375 (48%), Gaps = 8/375 (2%)
Query: 75 KWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVL-SFMNKKGYAPSVVS 133
KW EV EW+R + + +++ G A ++ S + Y+ V +
Sbjct: 156 KWKKALEVFEWIRKHDCFKLRGVATASILSVLGNHEQLPAALELFESLKQDESYSLDVYA 215
Query: 134 HTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVE-ANKFKEAEEVFMTL 192
+T+L+ R R+ +F MQ G R +A+TY ++L L+ + + + + +F +
Sbjct: 216 YTSLISILSRARRFDEGITLFETMQREGQRGNAVTYNVMLDLYGKRGDSWDRIQSLFQEM 275
Query: 193 LDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETN- 251
D E + PD ++ MI + ++A +LF M E G + VTYN+L+
Sbjct: 276 KDLE---ISPDDYTYNTMITACIQNSHCQEALRLFQEMKEAGCCPNRVTYNALLDVYGKG 332
Query: 252 --YKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAY 309
+KE S++ +M+ AG+ P++V+Y LI AY +A +EA A+ + +L G+ P Y
Sbjct: 333 GMHKEASELLVEMEAAGISPNIVTYNELIAAYARAGLCDEAAALKKSLLSKGLCPDEFTY 392
Query: 310 NILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQ 369
L+ AF + ++A F MR+ C+P+I +Y ++ Y ++ K F+ +++
Sbjct: 393 CTLISAFNRAERYEKALETFTEMRKTNCTPNIVTYNILIDIYGRMEKLDDMMKVFKFMQE 452
Query: 370 DGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDS 429
P+++T+ +L+K + L ++ ++ +M+ G P F +++ YG+ D
Sbjct: 453 KNCTPDLVTWNSLLKSFGNCGMLTEVSNVFREMKRAGYMPGVDTFNILIECYGRCGYVDY 512
Query: 430 AVVWYKEMESCGFPP 444
+V YK + G P
Sbjct: 513 SVDIYKGLLRTGLQP 527
Score = 131 bits (330), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 109/441 (24%), Positives = 190/441 (43%), Gaps = 31/441 (7%)
Query: 57 PLPKDLVLGTLVRLKQLKKWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAE 116
PLPK LG L R K VSE L+ + KQ D + A
Sbjct: 85 PLPKQR-LGALARYPPEGKPCDVSEAAH----------------SLLASISKQEDSSDAT 127
Query: 117 KVLSFMNKKGYAPSVVSHTALM---EAYGRGGRYKNAEAIFRRMQSSGP-RPSALTYQII 172
++L F+ + V++ + L+ +A GR G++K A +F ++ + + I
Sbjct: 128 ELLEFIAGE----LVLTDSELVYFVKALGRQGKWKKALEVFEWIRKHDCFKLRGVATASI 183
Query: 173 LKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAE 232
L + + A E+F +L +E L D + +I + +A +++ LF M
Sbjct: 184 LSVLGNHEQLPAALELFESLKQDESYSL--DVYAYTSLISILSRARRFDEGITLFETMQR 241
Query: 233 RGVQQSTVTYNSLMSFET----NYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREE 288
G + + VTYN ++ ++ + ++ +M+ + PD +Y +I A + +
Sbjct: 242 EGQRGNAVTYNVMLDLYGKRGDSWDRIQSLFQEMKDLEISPDDYTYNTMITACIQNSHCQ 301
Query: 289 EALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTML 348
EAL +F+EM +AG P YN LLD + GM +A + M SP+I +Y ++
Sbjct: 302 EALRLFQEMKEAGCCPNRVTYNALLDVYGKGGMHKEASELLVEMEAAGISPNIVTYNELI 361
Query: 349 SAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIK 408
+AY A + A + L G P+ TY TLI + + EK +E + +MR
Sbjct: 362 AAYARAGLCDEAAALKKSLLSKGLCPDEFTYCTLISAFNRAERYEKALETFTEMRKTNCT 421
Query: 409 PNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANEL 468
PN + ++D YG+ + D + +K M+ PD N LL E + +
Sbjct: 422 PNIVTYNILIDIYGRMEKLDDMMKVFKFMQEKNCTPDLVTWNSLLKSFGNCGMLTEVSNV 481
Query: 469 LGNFNHPNNEPGINGLSISVD 489
PG++ +I ++
Sbjct: 482 FREMKRAGYMPGVDTFNILIE 502
Score = 129 bits (324), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 84/363 (23%), Positives = 168/363 (46%), Gaps = 7/363 (1%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + + +LI YG+ + KV FM +K P +V+ +L++++G G +F
Sbjct: 423 NIVTYNILIDIYGRMEKLDDMMKVFKFMQEKNCTPDLVTWNSLLKSFGNCGMLTEVSNVF 482
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
R M+ +G P T+ I+++ + + +++ LL ++ L+P F ++
Sbjct: 483 REMKRAGYMPGVDTFNILIECYGRCGYVDYSVDIYKGLL---RTGLQPTVPTFAALMASL 539
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETN---YKEVSKIYDQMQRAGLQP-D 270
+ G +++ K+ MAE G+Q S + L+ N + ++ K D+++++ QP
Sbjct: 540 AREGRWQQCEKVSQEMAEAGLQLSDACHAGLIHSYANSGQFFQLRKYIDELEKSAKQPLS 599
Query: 271 VVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFK 330
+ + AY K + EA ++ D G P K +N ++ A G +++A + +
Sbjct: 600 GILCKTFVLAYCKCGMDNEAQLALNQLYDNGHSPDIKVFNAMISMCAKRGWIERAVKLLE 659
Query: 331 CMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVN 390
+R+ + PD +Y ++S Y AE+ +++ G PN+ITY TL+ Y K
Sbjct: 660 EIRKAQLKPDGVTYNCLMSMYGREGMYYKAEEVMSEMRRAGKAPNLITYNTLLYSYTKHG 719
Query: 391 NLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKN 450
++ ++ M ++P+ F T++ +Y + A+ + M G P Q
Sbjct: 720 RMDDAARVFGDMVAARVRPDNFTFNTLVGSYSSLGLYKEALSVIEYMTEHGCQPTQITFK 779
Query: 451 ILL 453
LL
Sbjct: 780 ALL 782
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 96/398 (24%), Positives = 175/398 (43%), Gaps = 42/398 (10%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + + L+ YGK G +A ++L M G +P++V++ L+ AY R G A A+
Sbjct: 318 NRVTYNALLDVYGKGGMHKEASELLVEMEAAGISPNIVTYNELIAAYARAGLCDEAAALK 377
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
+ + S G P TY ++ F A ++++A E F + K+ P+ ++++I +Y
Sbjct: 378 KSLLSKGLCPDEFTYCTLISAFNRAERYEKALETFTEM---RKTNCTPNIVTYNILIDIY 434
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETN---YKEVSKIYDQMQRAGLQPDV 271
+ + K+F M E+ VT+NSL+ N EVS ++ +M+RAG P V
Sbjct: 435 GRMEKLDDMMKVFKFMQEKNCTPDLVTWNSLLKSFGNCGMLTEVSNVFREMKRAGYMPGV 494
Query: 272 VSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKC 331
++ +LI YG+ + ++ +++ +L G++PT + L+ + A G Q V +
Sbjct: 495 DTFNILIECYGRCGYVDYSVDIYKGLLRTGLQPTVPTFAALMASLAREGRWQQCEKVSQE 554
Query: 332 MRR------DRCSPD-ICSYT-----------------------------TMLSAYVNAS 355
M D C I SY T + AY
Sbjct: 555 MAEAGLQLSDACHAGLIHSYANSGQFFQLRKYIDELEKSAKQPLSGILCKTFVLAYCKCG 614
Query: 356 DMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFT 415
A+ +L +G P++ + +I AK +E+ +++ +++R +KP+ +
Sbjct: 615 MDNEAQLALNQLYDNGHSPDIKVFNAMISMCAKRGWIERAVKLLEEIRKAQLKPDGVTYN 674
Query: 416 TIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILL 453
+M YG+ + A EM G P+ N LL
Sbjct: 675 CLMSMYGREGMYYKAEEVMSEMRRAGKAPNLITYNTLL 712
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 93/408 (22%), Positives = 179/408 (43%), Gaps = 54/408 (13%)
Query: 85 WLRIQSWWDFNEMDFL----------MLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSH 134
W RIQS F EM L +ITA + +A ++ M + G P+ V++
Sbjct: 265 WDRIQSL--FQEMKDLEISPDDYTYNTMITACIQNSHCQEALRLFQEMKEAGCCPNRVTY 322
Query: 135 TALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLD 194
AL++ YG+GG +K A + M+++G P+ +TY ++ + A EA + +LL
Sbjct: 323 NALLDVYGKGGMHKEASELLVEMEAAGISPNIVTYNELIAAYARAGLCDEAAALKKSLLS 382
Query: 195 EEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKE 254
+ L PD+ + +I + +A YEKA + F
Sbjct: 383 KG---LCPDEFTYCTLISAFNRAERYEKALETFT-------------------------- 413
Query: 255 VSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLD 314
+M++ P++V+Y +LI+ YG+ + ++ + VF+ M + P +N LL
Sbjct: 414 ------EMRKTNCTPNIVTYNILIDIYGRMEKLDDMMKVFKFMQEKNCTPDLVTWNSLLK 467
Query: 315 AFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVP 374
+F GM+ + VF+ M+R P + ++ ++ Y ++ + ++ L + G P
Sbjct: 468 SFGNCGMLTEVSNVFREMKRAGYMPGVDTFNILIECYGRCGYVDYSVDIYKGLLRTGLQP 527
Query: 375 NVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWY 434
V T+ L+ A+ ++ ++ +M G++ + ++ +Y + F +
Sbjct: 528 TVPTFAALMASLAREGRWQQCEKVSQEMAEAGLQLSDACHAGLIHSYANSGQFFQLRKYI 587
Query: 435 KEMESCGFPPDQK--AKNILLSLAKTADERNEA----NELLGNFNHPN 476
E+E P K +L+ K + NEA N+L N + P+
Sbjct: 588 DELEKSAKQPLSGILCKTFVLAYCKCGMD-NEAQLALNQLYDNGHSPD 634
>gi|224059754|ref|XP_002299984.1| predicted protein [Populus trichocarpa]
gi|222847242|gb|EEE84789.1| predicted protein [Populus trichocarpa]
Length = 610
Score = 158 bits (399), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 110/438 (25%), Positives = 203/438 (46%), Gaps = 12/438 (2%)
Query: 37 QIEEVGSAVAVLRSERTRGQPLPKDLVLGTLVRLKQLK-KWNVVSEVLEWLRIQSWWDFN 95
++ E A +LRS+ + +LG LV++ ++ W V EV ++S + N
Sbjct: 63 KLREGTEAFRILRSKGYLVSINACNSLLGGLVKIDWVELAWEVHREV-----VRSGIELN 117
Query: 96 EMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFR 155
+++ A K G F+ + LS M G +V++ L+ AY R G + A I
Sbjct: 118 VYTLNIMVNALCKDGKFDDVKSFLSEMEGNGIYADMVTYNTLIGAYCREGLLEEAFEIMN 177
Query: 156 RMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYK 215
M G +PS TY I+ + ++ A+ + + +L+ L PD ++ ++
Sbjct: 178 SMADKGLKPSLFTYNAIINGLCKKGRYARAKGILIEMLN---IGLSPDTTTYNTLLVESC 234
Query: 216 KAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSKI---YDQMQRAGLQPDVV 272
+ + +A+++F M +GV V+++SL++ + + + + + M++ GL PD V
Sbjct: 235 RRDNFSEAKEIFGEMLRQGVVPDLVSFSSLIAVFSRNRHLDQALVYFRDMKKFGLVPDNV 294
Query: 273 SYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCM 332
Y +L++ Y + EAL + +EML+ G AYN +L+ M+ A +F M
Sbjct: 295 IYTVLMHGYCRNGNMLEALKIRDEMLEQGCVLDVIAYNTILNGLCKEKMLTDADKLFDEM 354
Query: 333 RRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNL 392
PD ++TT++ + +M A F + Q P+++ Y TLI G+ KV +
Sbjct: 355 VERGALPDFYTFTTLIHGHCQDGNMTKALSLFGTMTQRNIKPDIVAYNTLIDGFCKVGEM 414
Query: 393 EKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNIL 452
EK E++D M I PN + +++AY A + M G P N +
Sbjct: 415 EKASELWDGMISRKIFPNHITYGILINAYCSVGHVSEAFRLWDVMIEKGIKPTLVTCNTV 474
Query: 453 LSLAKTADERNEANELLG 470
+ + + ++A+E LG
Sbjct: 475 IKGYCRSGDSSKADEFLG 492
Score = 148 bits (373), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 100/434 (23%), Positives = 187/434 (43%), Gaps = 70/434 (16%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
LI AY ++G +A ++++ M KG PS+ ++ A++ + GRY A+ I M + G
Sbjct: 159 LIGAYCREGLLEEAFEIMNSMADKGLKPSLFTYNAIINGLCKKGRYARAKGILIEMLNIG 218
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLL---------------------------- 193
P TY +L + F EA+E+F +L
Sbjct: 219 LSPDTTTYNTLLVESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLIAVFSRNRHLDQAL 278
Query: 194 ----DEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLM--- 246
D +K L PD ++ ++++ Y + G +A K+ M E+G + YN+++
Sbjct: 279 VYFRDMKKFGLVPDNVIYTVLMHGYCRNGNMLEALKIRDEMLEQGCVLDVIAYNTILNGL 338
Query: 247 --------------------------SFET---------NYKEVSKIYDQMQRAGLQPDV 271
+F T N + ++ M + ++PD+
Sbjct: 339 CKEKMLTDADKLFDEMVERGALPDFYTFTTLIHGHCQDGNMTKALSLFGTMTQRNIKPDI 398
Query: 272 VSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKC 331
V+Y LI+ + K E+A +++ M+ + P H Y IL++A+ G V +A ++
Sbjct: 399 VAYNTLIDGFCKVGEMEKASELWDGMISRKIFPNHITYGILINAYCSVGHVSEAFRLWDV 458
Query: 332 MRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNN 391
M P + + T++ Y + D A++F R+ G P+ I+Y TLI G+ + +N
Sbjct: 459 MIEKGIKPTLVTCNTVIKGYCRSGDSSKADEFLGRMIAKGVAPDHISYNTLINGFVREDN 518
Query: 392 LEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNI 451
++K +KM G+ P+ + +M+ + + A + ++M G PD+
Sbjct: 519 MDKAFLWINKMEKEGLLPDIITYNVVMNGFCRQGRMQEAELVLRKMIEKGINPDRSTYTA 578
Query: 452 LLSLAKTADERNEA 465
L++ T D NEA
Sbjct: 579 LINGHVTQDNLNEA 592
Score = 147 bits (371), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 90/352 (25%), Positives = 170/352 (48%), Gaps = 6/352 (1%)
Query: 97 MDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRR 156
+ F LI + + ++A M K G P V +T LM Y R G A I
Sbjct: 259 VSFSSLIAVFSRNRHLDQALVYFRDMKKFGLVPDNVIYTVLMHGYCRNGNMLEALKIRDE 318
Query: 157 MQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKK 216
M G + Y IL + +A+++F ++ E+ L PD F +I+ + +
Sbjct: 319 MLEQGCVLDVIAYNTILNGLCKEKMLTDADKLFDEMV--ERGAL-PDFYTFTTLIHGHCQ 375
Query: 217 AGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEV---SKIYDQMQRAGLQPDVVS 273
G KA LF M +R ++ V YN+L+ E+ S+++D M + P+ ++
Sbjct: 376 DGNMTKALSLFGTMTQRNIKPDIVAYNTLIDGFCKVGEMEKASELWDGMISRKIFPNHIT 435
Query: 274 YALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMR 333
Y +LINAY EA +++ M++ G++PT N ++ + SG +A M
Sbjct: 436 YGILINAYCSVGHVSEAFRLWDVMIEKGIKPTLVTCNTVIKGYCRSGDSSKADEFLGRMI 495
Query: 334 RDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLE 393
+PD SY T+++ +V +M+ A + +++++G +P++ITY ++ G+ + ++
Sbjct: 496 AKGVAPDHISYNTLINGFVREDNMDKAFLWINKMEKEGLLPDIITYNVVMNGFCRQGRMQ 555
Query: 394 KMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPD 445
+ + KM GI P+++ +T +++ + + + A ++ EM GF PD
Sbjct: 556 EAELVLRKMIEKGINPDRSTYTALINGHVTQDNLNEAFRFHDEMLQRGFAPD 607
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 89/179 (49%), Gaps = 6/179 (3%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + + +LI AY G ++A ++ M +KG P++V+ +++ Y R G A+
Sbjct: 432 NHITYGILINAYCSVGHVSEAFRLWDVMIEKGIKPTLVTCNTVIKGYCRSGDSSKADEFL 491
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
RM + G P ++Y ++ FV + +A F+ + EK L PD +++++ +
Sbjct: 492 GRMIAKGVAPDHISYNTLINGFVREDNMDKA---FLWINKMEKEGLLPDIITYNVVMNGF 548
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSLMS---FETNYKEVSKIYDQMQRAGLQPD 270
+ G ++A + M E+G+ TY +L++ + N E + +D+M + G PD
Sbjct: 549 CRQGRMQEAELVLRKMIEKGINPDRSTYTALINGHVTQDNLNEAFRFHDEMLQRGFAPD 607
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 85/197 (43%)
Query: 274 YALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMR 333
+ LLI Y +AR+ E F + G + A N LL V+ A V + +
Sbjct: 51 FDLLIRTYVQARKLREGTEAFRILRSKGYLVSINACNSLLGGLVKIDWVELAWEVHREVV 110
Query: 334 RDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLE 393
R ++ + M++A + + F ++ +G +++TY TLI Y + LE
Sbjct: 111 RSGIELNVYTLNIMVNALCKDGKFDDVKSFLSEMEGNGIYADMVTYNTLIGAYCREGLLE 170
Query: 394 KMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILL 453
+ EI + M G+KP+ + I++ K + A EM + G PD N LL
Sbjct: 171 EAFEIMNSMADKGLKPSLFTYNAIINGLCKKGRYARAKGILIEMLNIGLSPDTTTYNTLL 230
Query: 454 SLAKTADERNEANELLG 470
+ D +EA E+ G
Sbjct: 231 VESCRRDNFSEAKEIFG 247
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 35/156 (22%), Positives = 67/156 (42%), Gaps = 7/156 (4%)
Query: 337 CSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMM 396
C + + ++ YV A + + FR L+ G++ ++ +L+ G K++ +E
Sbjct: 44 CGTNNLVFDLLIRTYVQARKLREGTEAFRILRSKGYLVSINACNSLLGGLVKIDWVELAW 103
Query: 397 EIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLA 456
E++ ++ +GI+ N +++A K+ FD + EME G D N L+
Sbjct: 104 EVHREVVRSGIELNVYTLNIMVNALCKDGKFDDVKSFLSEMEGNGIYADMVTYNTLIGAY 163
Query: 457 KTADERNEANELLGNFNHPNNEPG-------INGLS 485
EA E++ + +P INGL
Sbjct: 164 CREGLLEEAFEIMNSMADKGLKPSLFTYNAIINGLC 199
>gi|224141335|ref|XP_002324029.1| predicted protein [Populus trichocarpa]
gi|222867031|gb|EEF04162.1| predicted protein [Populus trichocarpa]
Length = 629
Score = 158 bits (399), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 98/395 (24%), Positives = 187/395 (47%), Gaps = 7/395 (1%)
Query: 96 EMDFLMLITAYGKQGDFNKAEKVLSFMNKKG-YAPSVVSHTALMEAYGRGGRYKNAEAIF 154
++ +++ ++ D+ ++ +L ++N Y+PSV ++ ++ R ++ +A +F
Sbjct: 71 QLSIRFMVSVISRESDWQRSLALLDWINDIARYSPSVFAYNVVLRNVLRAKQWDHAHGLF 130
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
M++ P TY ++ F +A F + L E+ + D ++ +I +
Sbjct: 131 DEMRNRALAPDRYTYSTLITHFGKAGMFDAS---LFWLQQMEQDRVSGDLVLYSNLIELS 187
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSLMSF---ETNYKEVSKIYDQMQRAGLQPDV 271
+K Y KA +F + G+ V YNS+++ ++E + +M+ G+ PD
Sbjct: 188 RKLCDYSKAISIFMRLKRSGIMPDLVAYNSMINVFGKAKLFREAKLLMKEMREVGVMPDT 247
Query: 272 VSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKC 331
VSY+ L++ Y + + EAL+VF EM +A N+++D + M +A +F
Sbjct: 248 VSYSTLLSVYVENEKFVEALSVFAEMNEAKCPLDLTTCNVMIDVYGQLDMAKEADRLFWS 307
Query: 332 MRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNN 391
MR+ P++ SY T+L Y A FR +++ NV+TY T+IK Y K
Sbjct: 308 MRKMGIEPNVVSYNTLLRVYGETELFGEAIHLFRLMQKKDIEQNVVTYNTMIKVYGKSLE 367
Query: 392 LEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNI 451
EK + +M+ GI+PN ++TI+ +GK D A + ++++ S G DQ
Sbjct: 368 HEKATNLMQEMQNRGIEPNAITYSTIISIWGKAGKLDRAAMLFQKLRSSGVEIDQVLYQT 427
Query: 452 LLSLAKTADERNEANELLGNFNHPNNEPGINGLSI 486
++ + + A LL HP++ P + I
Sbjct: 428 MIVAYERSGLVAHAKRLLHELKHPDSIPRETAIKI 462
Score = 155 bits (391), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 96/378 (25%), Positives = 187/378 (49%), Gaps = 39/378 (10%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
LI K D++KA + + + G P +V++ +++ +G+ ++ A+ + + M+ G
Sbjct: 183 LIELSRKLCDYSKAISIFMRLKRSGIMPDLVAYNSMINVFGKAKLFREAKLLMKEMREVG 242
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
P ++Y +L ++VE KF EA VF + +E K PL D ++MI +Y + +
Sbjct: 243 VMPDTVSYSTLLSVYVENEKFVEALSVFAEM-NEAKCPL--DLTTCNVMIDVYGQLDMAK 299
Query: 222 KARKLFALMAERGVQQSTVTYNSLMSF--ETN-YKEVSKIYDQMQRAGLQPDVVSYALLI 278
+A +LF M + G++ + V+YN+L+ ET + E ++ MQ+ ++ +VV+Y +I
Sbjct: 300 EADRLFWSMRKMGIEPNVVSYNTLLRVYGETELFGEAIHLFRLMQKKDIEQNVVTYNTMI 359
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCS 338
YGK+ E+A + +EM + G+ P Y+ ++ + +G +D+A +F+ +R
Sbjct: 360 KVYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIISIWGKAGKLDRAAMLFQKLRSSGVE 419
Query: 339 PDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVP------------------------ 374
D Y TM+ AY + + A++ LK +P
Sbjct: 420 IDQVLYQTMIVAYERSGLVAHAKRLLHELKHPDSIPRETAIKILARAGRIEEATWVFRQA 479
Query: 375 -------NVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDF 427
++ +G ++ +++ ++E+++KMR G P+ + +++AYGK +F
Sbjct: 480 FDAGEVKDISVFGCMVDLFSRNRKPANVIEVFEKMRGAGYFPDSNVIALVLNAYGKLHEF 539
Query: 428 DSAVVWYKEM--ESCGFP 443
+ A YKEM E C FP
Sbjct: 540 EKADALYKEMQEEECVFP 557
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 75/315 (23%), Positives = 146/315 (46%), Gaps = 8/315 (2%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + + L+ YG+ F +A + M KK +VV++ +++ YG+ ++ A +
Sbjct: 316 NVVSYNTLLRVYGETELFGEAIHLFRLMQKKDIEQNVVTYNTMIKVYGKSLEHEKATNLM 375
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
+ MQ+ G P+A+TY I+ ++ +A K A +F L S ++ DQ ++ MI Y
Sbjct: 376 QEMQNRGIEPNAITYSTIISIWGKAGKLDRAAMLFQKL---RSSGVEIDQVLYQTMIVAY 432
Query: 215 KKAGGYEKARKLFA-LMAERGVQQSTVTYNSLMSFETNYKEVSKIYDQMQRAGLQPDVVS 273
+++G A++L L + + T +++ +E + ++ Q AG D+
Sbjct: 433 ERSGLVAHAKRLLHELKHPDSIPRETAI--KILARAGRIEEATWVFRQAFDAGEVKDISV 490
Query: 274 YALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMR 333
+ +++ + + R+ + VFE+M AG P ++L+A+ ++A ++K M+
Sbjct: 491 FGCMVDLFSRNRKPANVIEVFEKMRGAGYFPDSNVIALVLNAYGKLHEFEKADALYKEMQ 550
Query: 334 RDRCS-PDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNL 392
+ C PD + MLS Y D E F RL D + + + Y + N L
Sbjct: 551 EEECVFPDEVHF-QMLSLYGARKDFMMIEALFERLDSDPNINKKELHLVVASIYERKNRL 609
Query: 393 EKMMEIYDKMRVNGI 407
I ++M G+
Sbjct: 610 NDASRIMNRMSKGGV 624
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/231 (22%), Positives = 111/231 (48%), Gaps = 1/231 (0%)
Query: 272 VSYALLINAYGKARREEEALAVFEEMLD-AGVRPTHKAYNILLDAFAISGMVDQARTVFK 330
+S +++ + + +LA+ + + D A P+ AYN++L + D A +F
Sbjct: 72 LSIRFMVSVISRESDWQRSLALLDWINDIARYSPSVFAYNVVLRNVLRAKQWDHAHGLFD 131
Query: 331 CMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVN 390
MR +PD +Y+T+++ + A + + + ++++QD +++ Y LI+ K+
Sbjct: 132 EMRNRALAPDRYTYSTLITHFGKAGMFDASLFWLQQMEQDRVSGDLVLYSNLIELSRKLC 191
Query: 391 NLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKN 450
+ K + I+ +++ +GI P+ + ++++ +GK K F A + KEM G PD + +
Sbjct: 192 DYSKAISIFMRLKRSGIMPDLVAYNSMINVFGKAKLFREAKLLMKEMREVGVMPDTVSYS 251
Query: 451 ILLSLAKTADERNEANELLGNFNHPNNEPGINGLSISVDEEDDDDDDDEDD 501
LLS+ ++ EA + N + ++ +D D E D
Sbjct: 252 TLLSVYVENEKFVEALSVFAEMNEAKCPLDLTTCNVMIDVYGQLDMAKEAD 302
>gi|224097576|ref|XP_002310993.1| predicted protein [Populus trichocarpa]
gi|222850813|gb|EEE88360.1| predicted protein [Populus trichocarpa]
Length = 877
Score = 158 bits (399), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 99/382 (25%), Positives = 190/382 (49%), Gaps = 15/382 (3%)
Query: 72 QLKKWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSV 131
Q + W V E ++ + +F +++ Y ++GD ++A + M +G PS
Sbjct: 283 QPENWQAVVSAFERIKKPA-----RREFGLMVGYYARRGDMHRARQTFESMRVRGIYPSS 337
Query: 132 VSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEA-----E 186
+T+L+ AY G + A + R+M+ G S +TY I++ F + ++
Sbjct: 338 HVYTSLIHAYAVGRDMEEALSCVRKMKEEGVEMSLVTYSIVVGGFAKIGNADQSCNMDRA 397
Query: 187 EVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLM 246
E + ++EE D ++H M+ Y G EK +F + E G S ++Y L+
Sbjct: 398 ESLVREMEEEGIDAPID--IYHTMMNGYTMIGNEEKCLIVFKRLKECGFAPSVISYGCLI 455
Query: 247 SFETNYKEVSK---IYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVR 303
+ T +VSK + M+ AG++ ++ +Y++LIN + K + A VFE+++ G++
Sbjct: 456 NMYTKMGKVSKALEVSKMMESAGIKHNMKTYSMLINGFLKLKDWTNAFTVFEDVIKDGLK 515
Query: 304 PTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKF 363
P YN ++ AF G +D+A + K M++ R P ++ ++ + A +M A +
Sbjct: 516 PDVVLYNNIIKAFCGMGNMDRAIHMVKEMQKKRHRPTSRTFMPIIHGFARAGEMRRALEI 575
Query: 364 FRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGK 423
F +++ G +P V T+ L+ G + +EK +EI D+M + G+ P++ +TTIM+ Y
Sbjct: 576 FDMMRRSGCIPTVHTFNALVLGLVEKRQMEKAVEILDEMALAGVSPDEHTYTTIMNGYAA 635
Query: 424 NKDFDSAVVWYKEMESCGFPPD 445
D A ++ ++ + G D
Sbjct: 636 LGDTGKAFEYFTKLRNEGLELD 657
Score = 145 bits (365), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 105/389 (26%), Positives = 189/389 (48%), Gaps = 14/389 (3%)
Query: 59 PKDLVLGTLV----RLKQLKKWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNK 114
P + G L+ ++ ++ K VS+++E I+ N + MLI + K D+
Sbjct: 446 PSVISYGCLINMYTKMGKVSKALEVSKMMESAGIKH----NMKTYSMLINGFLKLKDWTN 501
Query: 115 AEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILK 174
A V + K G P VV + +++A+ G A + + MQ RP++ T+ I+
Sbjct: 502 AFTVFEDVIKDGLKPDVVLYNNIIKAFCGMGNMDRAIHMVKEMQKKRHRPTSRTFMPIIH 561
Query: 175 LFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERG 234
F A + + A E+F + +S P F+ ++ + EKA ++ MA G
Sbjct: 562 GFARAGEMRRALEIFDMM---RRSGCIPTVHTFNALVLGLVEKRQMEKAVEILDEMALAG 618
Query: 235 VQQSTVTYNSLMSFETNYKEVSKIYD---QMQRAGLQPDVVSYALLINAYGKARREEEAL 291
V TY ++M+ + K ++ +++ GL+ DV +Y L+ A K+ R + AL
Sbjct: 619 VSPDEHTYTTIMNGYAALGDTGKAFEYFTKLRNEGLELDVFTYEALLKACCKSGRMQSAL 678
Query: 292 AVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAY 351
AV EM + YNIL+D +A G V +A + + M+++ PDI +YT+ ++A
Sbjct: 679 AVTREMSAQNIPRNTFVYNILIDGWARRGDVWEAADLMQQMKQEGVQPDIHTYTSFINAC 738
Query: 352 VNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQ 411
A DM A K + ++ G PNV TY TLI G+A + EK + +++M++ G+KP++
Sbjct: 739 CKAGDMLRATKTIQEMEALGVKPNVKTYTTLIHGWACASLPEKALRCFEEMKLAGLKPDK 798
Query: 412 TIFTTIMDAYGKNKDFDSAVVWYKEMESC 440
++ +M + A ++ + C
Sbjct: 799 AVYHCLMTSLLSRATVAEAYIYSGILSIC 827
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 86/355 (24%), Positives = 171/355 (48%), Gaps = 6/355 (1%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
++ Y G+ K V + + G+APSV+S+ L+ Y + G+ A + + M+S+G
Sbjct: 419 MMNGYTMIGNEEKCLIVFKRLKECGFAPSVISYGCLINMYTKMGKVSKALEVSKMMESAG 478
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
+ + TY +++ F+ K K+ F D K LKPD +++ +I + G +
Sbjct: 479 IKHNMKTYSMLINGFL---KLKDWTNAFTVFEDVIKDGLKPDVVLYNNIIKAFCGMGNMD 535
Query: 222 KARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSK---IYDQMQRAGLQPDVVSYALLI 278
+A + M ++ + ++ T+ ++ E+ + I+D M+R+G P V ++ L+
Sbjct: 536 RAIHMVKEMQKKRHRPTSRTFMPIIHGFARAGEMRRALEIFDMMRRSGCIPTVHTFNALV 595
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCS 338
+ R+ E+A+ + +EM AGV P Y +++ +A G +A F +R +
Sbjct: 596 LGLVEKRQMEKAVEILDEMALAGVSPDEHTYTTIMNGYAALGDTGKAFEYFTKLRNEGLE 655
Query: 339 PDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEI 398
D+ +Y +L A + M+ A R + N Y LI G+A+ ++ + ++
Sbjct: 656 LDVFTYEALLKACCKSGRMQSALAVTREMSAQNIPRNTFVYNILIDGWARRGDVWEAADL 715
Query: 399 YDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILL 453
+M+ G++P+ +T+ ++A K D A +EME+ G P+ K L+
Sbjct: 716 MQQMKQEGVQPDIHTYTSFINACCKAGDMLRATKTIQEMEALGVKPNVKTYTTLI 770
>gi|302822936|ref|XP_002993123.1| hypothetical protein SELMODRAFT_136561 [Selaginella moellendorffii]
gi|300139014|gb|EFJ05763.1| hypothetical protein SELMODRAFT_136561 [Selaginella moellendorffii]
Length = 569
Score = 158 bits (399), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 97/383 (25%), Positives = 185/383 (48%), Gaps = 11/383 (2%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + LI K ++A +L M +G P + H ++ R GR ++A ++
Sbjct: 79 NHTTYYNLIHPLCKARLLDEAMGLLLDMKSRGMNPGTLLHNVVIGGLCRAGRLRHALGVY 138
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
R+M + P P LTY ++ +A + ++A +V ++ P D +++
Sbjct: 139 RQMNDAHP-PDFLTYTKLVHGLSKAGRLRDAVQVLQEMVSARHVP---DNTTLTVVVQSL 194
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSLM----SFETNYKEVSKIYDQMQRAGLQPD 270
+ AR+L M RG+ + +TY++L+ E + V+ + ++ R G PD
Sbjct: 195 CLGDRVDDARELVEEMLHRGMAANAITYSALVDGLCKCERLDEAVALLLGEVTRRGFTPD 254
Query: 271 VVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFK 330
+V+Y+ +I+ KA R +A+ +FEEM A PT YN L+ + +G +D+A +
Sbjct: 255 IVTYSTVIDGLCKAGRLRDAVDIFEEMSCA---PTAITYNSLIGGYCRAGDMDEAIRLLG 311
Query: 331 CMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVN 390
M D C+PD+ +YTT++SA+ ++ A + F+++ + P+V+T+ +L+ G
Sbjct: 312 KMVDDNCAPDVITYTTLMSAFCKMGRLDDAYELFQQMVANKLSPDVVTFTSLVDGLCGEG 371
Query: 391 NLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKN 450
+E +E+ +++ G P + ++D Y K+ A + S GF P+ N
Sbjct: 372 RMEDALELLEEITRRGCPPTIYTYNCVVDGYCKSNQVRKAEELVADFRSRGFVPNTVTYN 431
Query: 451 ILLSLAKTADERNEANELLGNFN 473
IL++ A ++A + L N
Sbjct: 432 ILVAGCCRAGRTDQALQYLDQLN 454
Score = 109 bits (272), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 103/471 (21%), Positives = 187/471 (39%), Gaps = 59/471 (12%)
Query: 44 AVAVLRSERTRGQ---PLPKDLVLGTLVRLKQLKKWNVVSEVLEWLRIQSWWDFNEMDFL 100
A+ +L ++RG L ++V+G L R +L+ V + D + DFL
Sbjct: 99 AMGLLLDMKSRGMNPGTLLHNVVIGGLCRAGRLRHALGV--------YRQMNDAHPPDFL 150
Query: 101 M---LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRM 157
L+ K G A +VL M + P + T ++++ G R +A + M
Sbjct: 151 TYTKLVHGLSKAGRLRDAVQVLQEMVSARHVPDNTTLTVVVQSLCLGDRVDDARELVEEM 210
Query: 158 QSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKA 217
G +A+TY ++ + + EA V + L + + PD + +I KA
Sbjct: 211 LHRGMAANAITYSALVDGLCKCERLDEA--VALLLGEVTRRGFTPDIVTYSTVIDGLCKA 268
Query: 218 GGYEKARKLFALMAERGVQQSTVTYNSLM---SFETNYKEVSKIYDQMQRAGLQPDVVSY 274
G A +F E + +TYNSL+ + E ++ +M PDV++Y
Sbjct: 269 GRLRDAVDIFE---EMSCAPTAITYNSLIGGYCRAGDMDEAIRLLGKMVDDNCAPDVITY 325
Query: 275 ALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRR 334
L++A+ K R ++A +F++M+ + P + L+D G ++ A + + + R
Sbjct: 326 TTLMSAFCKMGRLDDAYELFQQMVANKLSPDVVTFTSLVDGLCGEGRMEDALELLEEITR 385
Query: 335 DRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEK 394
C P I +Y ++ Y ++ + AE+ + GFVPN +TY L+ G + ++
Sbjct: 386 RGCPPTIYTYNCVVDGYCKSNQVRKAEELVADFRSRGFVPNTVTYNILVAGCCRAGRTDQ 445
Query: 395 MME-------------------------------------IYDKMRVNGIKPNQTIFTTI 417
++ Y++M G P F T+
Sbjct: 446 ALQYLDQLNSEGGPCPTSVAMYAIILDALCRDGRTDDAVQFYEEMIQRGYVPAAATFATV 505
Query: 418 MDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANEL 468
+ A K A +EM G P + ++S A +A+EL
Sbjct: 506 VFALCKAHQPQQAHELLEEMIKYGHTPGPGTCDAVVSAYCRAGMIQKADEL 556
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 80/340 (23%), Positives = 156/340 (45%), Gaps = 13/340 (3%)
Query: 35 MNQIEEVGSAVAVLRSERTRGQPLPKDLVLGTLVRLKQLKKWNVVSEVLEWLRIQSWWDF 94
+ + E + AVA+L E TR P + T++ L K + + ++ S
Sbjct: 229 LCKCERLDEAVALLLGEVTRRGFTPDIVTYSTVI--DGLCKAGRLRDAVDIFEEMSCAP- 285
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
+ + LI Y + GD ++A ++L M AP V+++T LM A+ + GR +A +F
Sbjct: 286 TAITYNSLIGGYCRAGDMDEAIRLLGKMVDDNCAPDVITYTTLMSAFCKMGRLDDAYELF 345
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDE-EKSPLKPDQKMFHMMIYM 213
++M ++ P +T+ ++ + ++A E LL+E + P ++ ++
Sbjct: 346 QQMVANKLSPDVVTFTSLVDGLCGEGRMEDALE----LLEEITRRGCPPTIYTYNCVVDG 401
Query: 214 YKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETN---YKEVSKIYDQMQRAG--LQ 268
Y K+ KA +L A RG +TVTYN L++ + + DQ+ G
Sbjct: 402 YCKSNQVRKAEELVADFRSRGFVPNTVTYNILVAGCCRAGRTDQALQYLDQLNSEGGPCP 461
Query: 269 PDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTV 328
V YA++++A + R ++A+ +EEM+ G P + ++ A + QA +
Sbjct: 462 TSVAMYAIILDALCRDGRTDDAVQFYEEMIQRGYVPAAATFATVVFALCKAHQPQQAHEL 521
Query: 329 FKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLK 368
+ M + +P + ++SAY A ++ A++ L+
Sbjct: 522 LEEMIKYGHTPGPGTCDAVVSAYCRAGMIQKADELASELR 561
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 80/329 (24%), Positives = 133/329 (40%), Gaps = 11/329 (3%)
Query: 157 MQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKS-PLKPDQKMFHMMIYMYK 215
M +G + T+ ++L+ + K + + LLDE + L PD + ++
Sbjct: 1 MLDAGYPSDSSTFAVVLRGLHASAKLRHLGPL---LLDEIRDRGLSPDPVELNTILAELC 57
Query: 216 KAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETN--YKEVSKIYDQMQRAGLQPDVVS 273
A A LF MAE G T YN + E + M+ G+ P +
Sbjct: 58 DARDTTTAMALFDKMAELGAVNHTTYYNLIHPLCKARLLDEAMGLLLDMKSRGMNPGTLL 117
Query: 274 YALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMR 333
+ ++I +A R AL V+ +M DA P Y L+ + +G + A V + M
Sbjct: 118 HNVVIGGLCRAGRLRHALGVYRQMNDAH-PPDFLTYTKLVHGLSKAGRLRDAVQVLQEMV 176
Query: 334 RDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNL- 392
R PD + T ++ + ++ A + + G N ITY L+ G K L
Sbjct: 177 SARHVPDNTTLTVVVQSLCLGDRVDDARELVEEMLHRGMAANAITYSALVDGLCKCERLD 236
Query: 393 EKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNIL 452
E + + ++ G P+ ++T++D K AV ++EM SC P N L
Sbjct: 237 EAVALLLGEVTRRGFTPDIVTYSTVIDGLCKAGRLRDAVDIFEEM-SCA--PTAITYNSL 293
Query: 453 LSLAKTADERNEANELLGNFNHPNNEPGI 481
+ A + +EA LLG N P +
Sbjct: 294 IGGYCRAGDMDEAIRLLGKMVDDNCAPDV 322
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/233 (21%), Positives = 95/233 (40%), Gaps = 3/233 (1%)
Query: 258 IYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFA 317
+ D+++ GL PD V ++ AR A+A+F++M + G H Y L+
Sbjct: 33 LLDEIRDRGLSPDPVELNTILAELCDARDTTTAMALFDKMAELGAV-NHTTYYNLIHPLC 91
Query: 318 ISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVI 377
+ ++D+A + M+ +P + ++ A + A +R++ D P+ +
Sbjct: 92 KARLLDEAMGLLLDMKSRGMNPGTLLHNVVIGGLCRAGRLRHALGVYRQM-NDAHPPDFL 150
Query: 378 TYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEM 437
TY L+ G +K L +++ +M P+ T T ++ + D A +EM
Sbjct: 151 TYTKLVHGLSKAGRLRDAVQVLQEMVSARHVPDNTTLTVVVQSLCLGDRVDDARELVEEM 210
Query: 438 ESCGFPPDQKAKNILLSLAKTADERNEANE-LLGNFNHPNNEPGINGLSISVD 489
G + + L+ + +EA LLG P I S +D
Sbjct: 211 LHRGMAANAITYSALVDGLCKCERLDEAVALLLGEVTRRGFTPDIVTYSTVID 263
>gi|296085044|emb|CBI28459.3| unnamed protein product [Vitis vinifera]
Length = 973
Score = 158 bits (399), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 97/376 (25%), Positives = 174/376 (46%), Gaps = 7/376 (1%)
Query: 97 MDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRR 156
+ + ++I + G+ +L M G P+ V +T LM A+ + GR + + I R
Sbjct: 417 LTYSVIINGLCRCGNLQGTNAILREMVMNGLKPNAVVYTTLMTAHAKEGRVEESRMILER 476
Query: 157 MQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKK 216
M+ G P Y ++ F +A + +EA M +L+ L+P+ + I Y K
Sbjct: 477 MREQGILPDVFCYNSLIIGFCKAKRMEEARTYLMEMLERR---LRPNAHTYGAFIDGYSK 533
Query: 217 AGGYEKARKLFALMAERGVQQSTVTYNSLM---SFETNYKEVSKIYDQMQRAGLQPDVVS 273
AG E A + F M GV + Y +L+ E N E ++ + + DV +
Sbjct: 534 AGEMEIADRYFNEMLSCGVLPNVGIYTALIEGHCKEGNVTEAFSVFRFILSRRVLQDVQT 593
Query: 274 YALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMR 333
Y++LI+ + + EA +F E+ + G+ P YN L+ G VD+A + + M
Sbjct: 594 YSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSLISGSCKQGNVDKASQLLEEMC 653
Query: 334 RDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLE 393
+PDI +Y ++ A ++E A+ F ++ G PN +TY ++ GY K N
Sbjct: 654 IKGINPDIVTYNILIDGLCKAGEIERAKNLFDDIEGRGLTPNCVTYAAMVDGYCKSKNPT 713
Query: 394 KMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILL 453
++ ++M + G+ P+ I+ I++ K + F+ A+ ++EM GF ++
Sbjct: 714 AAFQLLEEMLLRGVPPDAFIYNVILNFCCKEEKFEKALDLFQEMLEKGFASTVSFNTLIE 773
Query: 454 SLAKTADERNEANELL 469
K+ + EAN LL
Sbjct: 774 GYCKSG-KLQEANHLL 788
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 86/349 (24%), Positives = 174/349 (49%), Gaps = 9/349 (2%)
Query: 99 FLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQ 158
+ LI + K+G+ +A V F+ + V +++ L+ R G+ A IF +Q
Sbjct: 559 YTALIEGHCKEGNVTEAFSVFRFILSRRVLQDVQTYSVLIHGLSRNGKMHEAFGIFSELQ 618
Query: 159 SSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEK-SPLKPDQKMFHMMIYMYKKA 217
G P+A TY ++ + +A + LL+E + PD ++++I KA
Sbjct: 619 EKGLLPNAFTYNSLISGSCKQGNVDKASQ----LLEEMCIKGINPDIVTYNILIDGLCKA 674
Query: 218 GGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVS---KIYDQMQRAGLQPDVVSY 274
G E+A+ LF + RG+ + VTY +++ K + ++ ++M G+ PD Y
Sbjct: 675 GEIERAKNLFDDIEGRGLTPNCVTYAAMVDGYCKSKNPTAAFQLLEEMLLRGVPPDAFIY 734
Query: 275 ALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRR 334
+++N K + E+AL +F+EML+ G T ++N L++ + SG + +A + + M
Sbjct: 735 NVILNFCCKEEKFEKALDLFQEMLEKGFAST-VSFNTLIEGYCKSGKLQEANHLLEEMIE 793
Query: 335 DRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEK 394
+ P+ +YT+++ A M A++ + +++ +P TY +L+ GY + N+ +
Sbjct: 794 KQFIPNHVTYTSLIDHNCKAGMMGEAKRLWLEMQERNVMPTAKTYTSLLHGYHNIGNMSE 853
Query: 395 MMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFP 443
+ ++++M GI+P++ + ++DAY + + A E+ G P
Sbjct: 854 VSALFEEMVAKGIEPDKMTYYVMIDAYCREGNVMEACKLKDEILVKGMP 902
Score = 132 bits (333), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 87/355 (24%), Positives = 166/355 (46%), Gaps = 7/355 (1%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
I Y K G+ A++ + M G P+V +TAL+E + + G A ++FR + S
Sbjct: 527 FIDGYSKAGEMEIADRYFNEMLSCGVLPNVGIYTALIEGHCKEGNVTEAFSVFRFILSRR 586
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
TY +++ K EA +F L +EK L P+ ++ +I K G +
Sbjct: 587 VLQDVQTYSVLIHGLSRNGKMHEAFGIFSEL--QEKG-LLPNAFTYNSLISGSCKQGNVD 643
Query: 222 KARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSK---IYDQMQRAGLQPDVVSYALLI 278
KA +L M +G+ VTYN L+ E+ + ++D ++ GL P+ V+YA ++
Sbjct: 644 KASQLLEEMCIKGINPDIVTYNILIDGLCKAGEIERAKNLFDDIEGRGLTPNCVTYAAMV 703
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCS 338
+ Y K++ A + EEML GV P YN++L+ ++A +F+ M +
Sbjct: 704 DGYCKSKNPTAAFQLLEEMLLRGVPPDAFIYNVILNFCCKEEKFEKALDLFQEMLEKGFA 763
Query: 339 PDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEI 398
+ S+ T++ Y + ++ A + + F+PN +TY +LI K + + +
Sbjct: 764 STV-SFNTLIEGYCKSGKLQEANHLLEEMIEKQFIPNHVTYTSLIDHNCKAGMMGEAKRL 822
Query: 399 YDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILL 453
+ +M+ + P +T+++ Y + ++EM + G PD+ +++
Sbjct: 823 WLEMQERNVMPTAKTYTSLLHGYHNIGNMSEVSALFEEMVAKGIEPDKMTYYVMI 877
Score = 131 bits (330), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 93/383 (24%), Positives = 162/383 (42%), Gaps = 43/383 (11%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
LI + +QGD +A ++ M G +++ L+ + G+ + A I + M G
Sbjct: 317 LIDGFMRQGDIEQAFRIKDEMVACGIEANLIIWNTLLNGVCKAGKMEKALEIMQEMMEKG 376
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDE-EKSPLKPDQKMFHMMIYMYKKAGGY 220
P + TY ++++ A E LLDE +K L P + ++I + G
Sbjct: 377 VEPDSQTYSLLIEGHCRGQNMARAFE----LLDEMKKRKLAPTVLTYSVIINGLCRCGNL 432
Query: 221 EKARKLFALMAERGVQQSTVTYNSLMSF---ETNYKEVSKIYDQMQRAGLQPDVVSYALL 277
+ + M G++ + V Y +LM+ E +E I ++M+ G+ PDV Y L
Sbjct: 433 QGTNAILREMVMNGLKPNAVVYTTLMTAHAKEGRVEESRMILERMREQGILPDVFCYNSL 492
Query: 278 INAYGKARREEEALA-----------------------------------VFEEMLDAGV 302
I + KA+R EEA F EML GV
Sbjct: 493 IIGFCKAKRMEEARTYLMEMLERRLRPNAHTYGAFIDGYSKAGEMEIADRYFNEMLSCGV 552
Query: 303 RPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEK 362
P Y L++ G V +A +VF+ + R D+ +Y+ ++ M A
Sbjct: 553 LPNVGIYTALIEGHCKEGNVTEAFSVFRFILSRRVLQDVQTYSVLIHGLSRNGKMHEAFG 612
Query: 363 FFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYG 422
F L++ G +PN TY +LI G K N++K ++ ++M + GI P+ + ++D
Sbjct: 613 IFSELQEKGLLPNAFTYNSLISGSCKQGNVDKASQLLEEMCIKGINPDIVTYNILIDGLC 672
Query: 423 KNKDFDSAVVWYKEMESCGFPPD 445
K + + A + ++E G P+
Sbjct: 673 KAGEIERAKNLFDDIEGRGLTPN 695
Score = 129 bits (323), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 89/392 (22%), Positives = 184/392 (46%), Gaps = 6/392 (1%)
Query: 101 MLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSS 160
+LI + + +A+ +L M G P +++ AL++ + R G + A I M +
Sbjct: 281 ILINGFCMEKRSREAKLMLLEMIDVGLKPEPITYNALIDGFMRQGDIEQAFRIKDEMVAC 340
Query: 161 GPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGY 220
G + + + +L +A K ++A E+ ++++ ++PD + + ++I + +
Sbjct: 341 GIEANLIIWNTLLNGVCKAGKMEKALEIMQEMMEK---GVEPDSQTYSLLIEGHCRGQNM 397
Query: 221 EKARKLFALMAERGVQQSTVTYNSLMSFET---NYKEVSKIYDQMQRAGLQPDVVSYALL 277
+A +L M +R + + +TY+ +++ N + + I +M GL+P+ V Y L
Sbjct: 398 ARAFELLDEMKKRKLAPTVLTYSVIINGLCRCGNLQGTNAILREMVMNGLKPNAVVYTTL 457
Query: 278 INAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRC 337
+ A+ K R EE+ + E M + G+ P YN L+ F + +++ART M R
Sbjct: 458 MTAHAKEGRVEESRMILERMREQGILPDVFCYNSLIIGFCKAKRMEEARTYLMEMLERRL 517
Query: 338 SPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMME 397
P+ +Y + Y A +ME A+++F + G +PNV Y LI+G+ K N+ +
Sbjct: 518 RPNAHTYGAFIDGYSKAGEMEIADRYFNEMLSCGVLPNVGIYTALIEGHCKEGNVTEAFS 577
Query: 398 IYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAK 457
++ + + + ++ ++ +N A + E++ G P+ N L+S +
Sbjct: 578 VFRFILSRRVLQDVQTYSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSLISGSC 637
Query: 458 TADERNEANELLGNFNHPNNEPGINGLSISVD 489
++A++LL P I +I +D
Sbjct: 638 KQGNVDKASQLLEEMCIKGINPDIVTYNILID 669
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 89/406 (21%), Positives = 175/406 (43%), Gaps = 58/406 (14%)
Query: 95 NEMDFLMLITAYGKQGDF--------------------------------NKAE---KVL 119
N + F ML+ +Y K G NK E KV
Sbjct: 153 NSVIFDMLMDSYRKMGFLVEAVNVFLGPKNFEFRPSLLSCNSLLGDLLKGNKVELFWKVF 212
Query: 120 SFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF-----------------RRMQSSGP 162
M P V ++T ++ A+ + G K+A+ + R M G
Sbjct: 213 DGMCAHKVLPDVYTYTNMISAHCKVGNVKDAKRVLLEMGEKARLLDEAIELKRSMVDKGL 272
Query: 163 RPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEK 222
P TY I++ F + +EA+ + + ++D LKP+ ++ +I + + G E+
Sbjct: 273 VPDLYTYDILINGFCMEKRSREAKLMLLEMID---VGLKPEPITYNALIDGFMRQGDIEQ 329
Query: 223 ARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSK---IYDQMQRAGLQPDVVSYALLIN 279
A ++ M G++ + + +N+L++ ++ K I +M G++PD +Y+LLI
Sbjct: 330 AFRIKDEMVACGIEANLIIWNTLLNGVCKAGKMEKALEIMQEMMEKGVEPDSQTYSLLIE 389
Query: 280 AYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSP 339
+ + + A + +EM + PT Y+++++ G + + + M + P
Sbjct: 390 GHCRGQNMARAFELLDEMKKRKLAPTVLTYSVIINGLCRCGNLQGTNAILREMVMNGLKP 449
Query: 340 DICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIY 399
+ YTT+++A+ +E + R+++ G +P+V Y +LI G+ K +E+
Sbjct: 450 NAVVYTTLMTAHAKEGRVEESRMILERMREQGILPDVFCYNSLIIGFCKAKRMEEARTYL 509
Query: 400 DKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPD 445
+M ++PN + +D Y K + + A ++ EM SCG P+
Sbjct: 510 MEMLERRLRPNAHTYGAFIDGYSKAGEMEIADRYFNEMLSCGVLPN 555
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 85/361 (23%), Positives = 151/361 (41%), Gaps = 53/361 (14%)
Query: 128 APSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEE 187
+P+ V LM++Y + G A +F ++ RPS L+ +L ++ NK + +
Sbjct: 151 SPNSVIFDMLMDSYRKMGFLVEAVNVFLGPKNFEFRPSLLSCNSLLGDLLKGNKVELFWK 210
Query: 188 VFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMS 247
VF + + + PD + MI + K G + A+++ M E+
Sbjct: 211 VFDGMCAHK---VLPDVYTYTNMISAHCKVGNVKDAKRVLLEMGEKA------------- 254
Query: 248 FETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHK 307
E ++ M GL PD+ +Y +LIN + +R EA + EM+D G++P
Sbjct: 255 --RLLDEAIELKRSMVDKGLVPDLYTYDILINGFCMEKRSREAKLMLLEMIDVGLKPEPI 312
Query: 308 AYNILLDAFAISGMVDQA---------------RTVFKCMRRDRCS-------------- 338
YN L+D F G ++QA ++ + C
Sbjct: 313 TYNALIDGFMRQGDIEQAFRIKDEMVACGIEANLIIWNTLLNGVCKAGKMEKALEIMQEM 372
Query: 339 ------PDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNL 392
PD +Y+ ++ + +M A + +K+ P V+TY +I G + NL
Sbjct: 373 MEKGVEPDSQTYSLLIEGHCRGQNMARAFELLDEMKKRKLAPTVLTYSVIINGLCRCGNL 432
Query: 393 EKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNIL 452
+ I +M +NG+KPN ++TT+M A+ K + + + + M G PD N L
Sbjct: 433 QGTNAILREMVMNGLKPNAVVYTTLMTAHAKEGRVEESRMILERMREQGILPDVFCYNSL 492
Query: 453 L 453
+
Sbjct: 493 I 493
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 84/335 (25%), Positives = 152/335 (45%), Gaps = 13/335 (3%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + LI+ KQG+ +KA ++L M KG P +V++ L++ + G + A+ +F
Sbjct: 625 NAFTYNSLISGSCKQGNVDKASQLLEEMCIKGINPDIVTYNILIDGLCKAGEIERAKNLF 684
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
++ G P+ +TY ++ + K K F L + + PD ++++++
Sbjct: 685 DDIEGRGLTPNCVTYAAMVDGYC---KSKNPTAAFQLLEEMLLRGVPPDAFIYNVILNFC 741
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSLM---SFETNYKEVSKIYDQMQRAGLQPDV 271
K +EKA LF M E+G STV++N+L+ +E + + ++M P+
Sbjct: 742 CKEEKFEKALDLFQEMLEKGFA-STVSFNTLIEGYCKSGKLQEANHLLEEMIEKQFIPNH 800
Query: 272 VSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKC 331
V+Y LI+ KA EA ++ EM + V PT K Y LL + G + + +F+
Sbjct: 801 VTYTSLIDHNCKAGMMGEAKRLWLEMQERNVMPTAKTYTSLLHGYHNIGNMSEVSALFEE 860
Query: 332 MRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRL------KQDGFVPNVITYGTLIKG 385
M PD +Y M+ AY ++ A K + + GF + T + +G
Sbjct: 861 MVAKGIEPDKMTYYVMIDAYCREGNVMEACKLKDEILVKGMPMKSGFRLGLPTCSVIARG 920
Query: 386 YAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDA 420
+ N+++ E+ M G N T ++D
Sbjct: 921 FQIAGNMDEAAEVLRSMVKFGWVSNTTSLGDLVDG 955
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 78/352 (22%), Positives = 157/352 (44%), Gaps = 44/352 (12%)
Query: 58 LPKDLVLGTLVRLKQLKKWNV--VSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKA 115
LP +L+ K+ NV S++LE + I+ + + + + +LI K G+ +A
Sbjct: 623 LPNAFTYNSLIS-GSCKQGNVDKASQLLEEMCIKGI-NPDIVTYNILIDGLCKAGEIERA 680
Query: 116 EKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKL 175
+ + + +G P+ V++ A+++ Y + A + M G P A Y +IL
Sbjct: 681 KNLFDDIEGRGLTPNCVTYAAMVDGYCKSKNPTAAFQLLEEMLLRGVPPDAFIYNVILNF 740
Query: 176 FVEANKFKEAEEVFMTLLD----------------------EEKSPLK---------PDQ 204
+ KF++A ++F +L+ +E + L P+
Sbjct: 741 CCKEEKFEKALDLFQEMLEKGFASTVSFNTLIEGYCKSGKLQEANHLLEEMIEKQFIPNH 800
Query: 205 KMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNY---KEVSKIYDQ 261
+ +I KAG +A++L+ M ER V + TY SL+ N EVS ++++
Sbjct: 801 VTYTSLIDHNCKAGMMGEAKRLWLEMQERNVMPTAKTYTSLLHGYHNIGNMSEVSALFEE 860
Query: 262 MQRAGLQPDVVSYALLINAYGKARREEEALAVFEEML------DAGVRPTHKAYNILLDA 315
M G++PD ++Y ++I+AY + EA + +E+L +G R +++
Sbjct: 861 MVAKGIEPDKMTYYVMIDAYCREGNVMEACKLKDEILVKGMPMKSGFRLGLPTCSVIARG 920
Query: 316 FAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRL 367
F I+G +D+A V + M + + S ++ N ++ E ++ +++
Sbjct: 921 FQIAGNMDEAAEVLRSMVKFGWVSNTTSLGDLVDGNQNGANSEDSDNLLKQM 972
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 71/332 (21%), Positives = 136/332 (40%), Gaps = 36/332 (10%)
Query: 176 FVEANKFKEAEEVFMTLLDEEKSPL---------------KPDQKMFHMMIYMYKKAGGY 220
+N + A ++ ++ SPL P+ +F M++ Y+K G
Sbjct: 111 LCNSNWYGPASDLIKCIIRNSDSPLAVLGSIVKCYRSCNGSPNSVIFDMLMDSYRKMGFL 170
Query: 221 EKARKLFALMAERGVQQSTVTYNSLMS--FETNYKEVS-KIYDQMQRAGLQPDVVSYALL 277
+A +F + S ++ NSL+ + N E+ K++D M + PDV +Y +
Sbjct: 171 VEAVNVFLGPKNFEFRPSLLSCNSLLGDLLKGNKVELFWKVFDGMCAHKVLPDVYTYTNM 230
Query: 278 INAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRC 337
I+A+ K ++A V EM + + ++D+A + + M
Sbjct: 231 ISAHCKVGNVKDAKRVLLEMGEK------------------ARLLDEAIELKRSMVDKGL 272
Query: 338 SPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMME 397
PD+ +Y +++ + A+ + G P ITY LI G+ + ++E+
Sbjct: 273 VPDLYTYDILINGFCMEKRSREAKLMLLEMIDVGLKPEPITYNALIDGFMRQGDIEQAFR 332
Query: 398 IYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAK 457
I D+M GI+ N I+ T+++ K + A+ +EM G PD + ++L+
Sbjct: 333 IKDEMVACGIEANLIIWNTLLNGVCKAGKMEKALEIMQEMMEKGVEPDSQTYSLLIEGHC 392
Query: 458 TADERNEANELLGNFNHPNNEPGINGLSISVD 489
A ELL P + S+ ++
Sbjct: 393 RGQNMARAFELLDEMKKRKLAPTVLTYSVIIN 424
>gi|147834641|emb|CAN60904.1| hypothetical protein VITISV_016343 [Vitis vinifera]
Length = 580
Score = 158 bits (399), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 95/364 (26%), Positives = 170/364 (46%), Gaps = 6/364 (1%)
Query: 109 QGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALT 168
+G KA + + FM G+ P+VVS+ ++ Y G + A I M+ G P + T
Sbjct: 186 EGKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYT 245
Query: 169 YQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFA 228
Y ++ + + +EA +F +++ L P+ ++ +I Y G E+A
Sbjct: 246 YGSLISGMCKEGRLEEASGLFDKMVE---IGLVPNAVTYNTLIDGYCNKGDLERAFSYRD 302
Query: 229 LMAERGVQQSTVTYNSLMS---FETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKAR 285
M ++G+ S TYN L+ E E + +M++ G+ PD ++Y +LIN Y +
Sbjct: 303 EMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCG 362
Query: 286 REEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYT 345
+ A + EML G+ PTH Y L+ + + +A +F+ + SPD+ +
Sbjct: 363 NAKRAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFN 422
Query: 346 TMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVN 405
M+ + ++E A + + + P+ +T+ TL++G + +E+ + D+M+
Sbjct: 423 AMIDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMKXR 482
Query: 406 GIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEA 465
GIKP+ + T++ YG+ D A EM S GF P N L+ E + A
Sbjct: 483 GIKPDHISYNTLISGYGRRGDIKDAFXVRDEMLSIGFNPTLLTYNALIKCLCKNQEGDLA 542
Query: 466 NELL 469
ELL
Sbjct: 543 EELL 546
Score = 141 bits (356), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 92/354 (25%), Positives = 167/354 (47%), Gaps = 6/354 (1%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + + +I Y +G+ A ++L M KG P ++ +L+ + GR + A +F
Sbjct: 207 NVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLF 266
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
+M G P+A+TY ++ + NK + E F + K + P ++++++
Sbjct: 267 DKMVEIGLVPNAVTYNTLIDGY--CNK-GDLERAFSYRDEMVKKGIMPSVSTYNLLVHAL 323
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSLM---SFETNYKEVSKIYDQMQRAGLQPDV 271
G +A + M ++G+ +TYN L+ S N K ++++M G++P
Sbjct: 324 FMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCGNAKRAFDLHNEMLSKGIEPTH 383
Query: 272 VSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKC 331
V+Y LI + R +EA +FE++LD GV P +N ++D +G V++A + K
Sbjct: 384 VTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMIDGHCANGNVERAFMLLKE 443
Query: 332 MRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNN 391
M R PD ++ T++ +E A +K G P+ I+Y TLI GY + +
Sbjct: 444 MDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMKXRGIKPDHISYNTLISGYGRRGD 503
Query: 392 LEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPD 445
++ + D+M G P + ++ KN++ D A KEM + G PD
Sbjct: 504 IKDAFXVRDEMLSIGFNPTLLTYNALIKCLCKNQEGDLAEELLKEMVNKGISPD 557
>gi|302820627|ref|XP_002991980.1| hypothetical protein SELMODRAFT_162081 [Selaginella moellendorffii]
gi|300140222|gb|EFJ06948.1| hypothetical protein SELMODRAFT_162081 [Selaginella moellendorffii]
Length = 509
Score = 158 bits (399), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 94/380 (24%), Positives = 189/380 (49%), Gaps = 13/380 (3%)
Query: 62 LVLGTLVRLKQLKKWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSF 121
+V+G L ++ +L ++ + E + +QS +++ + +L+ + K + + ++
Sbjct: 127 VVIGHLCKINKL---DLAASYFERM-VQSGCLPDKVTYTVLVHSLFKACKWEQGHQIFEE 182
Query: 122 MNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANK 181
M KG++P +V++ ++ Y + GR A ++ RR++ +G PS Y ++ + ++
Sbjct: 183 MLSKGHSPELVTYATVVNGYCKAGRIDQALSLMRRLKGTGRSPSGSLYSTLIDGLCKHDR 242
Query: 182 FKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVT 241
EA E+F E + D ++ I KAG ++A+ + M E G V+
Sbjct: 243 HDEARELF-----EMAAGDVQDVIVYTSFISGLCKAGKLDEAKAVHVKMIEAGCAPDPVS 297
Query: 242 YNSL---MSFETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEML 298
YN + + + E ++ DQ P V +L++ K+RR EEA + E ML
Sbjct: 298 YNVIIYSLCKDNRVSEAKELMDQAMERKCMPGVPVCTVLVDGLCKSRRVEEACVILERML 357
Query: 299 DAGVR-PTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDM 357
+ G R P+ Y+ ++D + +D A V + MRR C PD+ +YT ++ A+ +
Sbjct: 358 ETGDRAPSVVTYSAVIDGLCKADRLDDAYVVLQKMRRAGCVPDVVTYTAIIDAFCKVGRL 417
Query: 358 EGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTI 417
+ A + F+R+ + G +V+ Y LI+GY + +++ + + ++M GI+PN +TI
Sbjct: 418 DEARELFQRMHERGCALDVVAYNILIRGYCRAAKVDEAIAMIEEMAGRGIQPNVVSLSTI 477
Query: 418 MDAYGKNKDFDSAVVWYKEM 437
+D K + A + ++M
Sbjct: 478 VDGLCKESRVEEARLLMEKM 497
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 110/491 (22%), Positives = 211/491 (42%), Gaps = 41/491 (8%)
Query: 13 RRKVEVFKDA------ADEAGKKNWRRLMNQIEEVGSAVAVLRSERTRGQPLPKDLVLGT 66
R VFKD D+ R + E++ AV +L + G P + G+
Sbjct: 34 REAYRVFKDELVTLFRPDDFTYGTLIRGFCKAEQIPQAVNLLGEMKAAGIT-PTIVTFGS 92
Query: 67 LVRLKQLKKWNVVSEVLEWLRIQSWWDFNEM-------DFLMLITAYGKQGDFNKAEKVL 119
L+R +L + N + L+ F++M D + G NK +
Sbjct: 93 LIR--KLCELNFTDKALQI--------FHQMIDMKVKPDAFLYTVVIGHLCKINKLDLAA 142
Query: 120 SF---MNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLF 176
S+ M + G P V++T L+ + + +++ IF M S G P +TY ++ +
Sbjct: 143 SYFERMVQSGCLPDKVTYTVLVHSLFKACKWEQGHQIFEEMLSKGHSPELVTYATVVNGY 202
Query: 177 VEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQ 236
+A + +A + L +SP ++ +I K +++AR+LF + A G
Sbjct: 203 CKAGRIDQALSLMRRLKGTGRSP---SGSLYSTLIDGLCKHDRHDEARELFEMAA--GDV 257
Query: 237 QSTVTYNSLMSFETN---YKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAV 293
Q + Y S +S E ++ +M AG PD VSY ++I + K R EA +
Sbjct: 258 QDVIVYTSFISGLCKAGKLDEAKAVHVKMIEAGCAPDPVSYNVIIYSLCKDNRVSEAKEL 317
Query: 294 FEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRR--DRCSPDICSYTTMLSAY 351
++ ++ P +L+D S V++A + + M DR +P + +Y+ ++
Sbjct: 318 MDQAMERKCMPGVPVCTVLVDGLCKSRRVEEACVILERMLETGDR-APSVVTYSAVIDGL 376
Query: 352 VNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQ 411
A ++ A +++++ G VP+V+TY +I + KV L++ E++ +M G +
Sbjct: 377 CKADRLDDAYVVLQKMRRAGCVPDVVTYTAIIDAFCKVGRLDEARELFQRMHERGCALDV 436
Query: 412 TIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGN 471
+ ++ Y + D A+ +EM G P+ + + ++ EA L+
Sbjct: 437 VAYNILIRGYCRAAKVDEAIAMIEEMAGRGIQPNVVSLSTIVDGLCKESRVEEARLLMEK 496
Query: 472 FNH---PNNEP 479
N P+++P
Sbjct: 497 MNFESLPDSDP 507
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 93/381 (24%), Positives = 171/381 (44%), Gaps = 9/381 (2%)
Query: 113 NKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQII 172
+KA ++ M P +T ++ + + A + F RM SG P +TY ++
Sbjct: 104 DKALQIFHQMIDMKVKPDAFLYTVVIGHLCKINKLDLAASYFERMVQSGCLPDKVTYTVL 163
Query: 173 LKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAE 232
+ +A K+++ ++F +L + SP + + ++ Y KAG ++A L +
Sbjct: 164 VHSLFKACKWEQGHQIFEEMLSKGHSP---ELVTYATVVNGYCKAGRIDQALSLMRRLKG 220
Query: 233 RGVQQSTVTYNSL---MSFETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEE 289
G S Y++L + + E ++++ AG DV+ Y I+ KA + +E
Sbjct: 221 TGRSPSGSLYSTLIDGLCKHDRHDEARELFEMA--AGDVQDVIVYTSFISGLCKAGKLDE 278
Query: 290 ALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLS 349
A AV +M++AG P +YN+++ + V +A+ + +C P + T ++
Sbjct: 279 AKAVHVKMIEAGCAPDPVSYNVIIYSLCKDNRVSEAKELMDQAMERKCMPGVPVCTVLVD 338
Query: 350 AYVNASDMEGAEKFFRRLKQDG-FVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIK 408
+ +E A R+ + G P+V+TY +I G K + L+ + KMR G
Sbjct: 339 GLCKSRRVEEACVILERMLETGDRAPSVVTYSAVIDGLCKADRLDDAYVVLQKMRRAGCV 398
Query: 409 PNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANEL 468
P+ +T I+DA+ K D A ++ M G D A NIL+ A + +EA +
Sbjct: 399 PDVVTYTAIIDAFCKVGRLDEARELFQRMHERGCALDVVAYNILIRGYCRAAKVDEAIAM 458
Query: 469 LGNFNHPNNEPGINGLSISVD 489
+ +P + LS VD
Sbjct: 459 IEEMAGRGIQPNVVSLSTIVD 479
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 87/327 (26%), Positives = 153/327 (46%), Gaps = 12/327 (3%)
Query: 168 TYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLF 227
T +L++FV +EA VF DE + +PD + +I + KA +A L
Sbjct: 19 TCNSLLEVFVNDGCHREAYRVFK---DELVTLFRPDDFTYGTLIRGFCKAEQIPQAVNLL 75
Query: 228 ALMAERGVQQSTVTYNSLMS--FETNYKEVS-KIYDQMQRAGLQPDVVSYALLINAYGKA 284
M G+ + VT+ SL+ E N+ + + +I+ QM ++PD Y ++I K
Sbjct: 76 GEMKAAGITPTIVTFGSLIRKLCELNFTDKALQIFHQMIDMKVKPDAFLYTVVIGHLCKI 135
Query: 285 RREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSY 344
+ + A + FE M+ +G P Y +L+ + + +Q +F+ M SP++ +Y
Sbjct: 136 NKLDLAASYFERMVQSGCLPDKVTYTVLVHSLFKACKWEQGHQIFEEMLSKGHSPELVTY 195
Query: 345 TTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRV 404
T+++ Y A ++ A RRLK G P+ Y TLI G K + ++ E+++
Sbjct: 196 ATVVNGYCKAGRIDQALSLMRRLKGTGRSPSGSLYSTLIDGLCKHDRHDEARELFEM--A 253
Query: 405 NGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILL-SLAKTADER- 462
G + ++T+ + K D A + +M G PD + N+++ SL K D R
Sbjct: 254 AGDVQDVIVYTSFISGLCKAGKLDEAKAVHVKMIEAGCAPDPVSYNVIIYSLCK--DNRV 311
Query: 463 NEANELLGNFNHPNNEPGINGLSISVD 489
+EA EL+ PG+ ++ VD
Sbjct: 312 SEAKELMDQAMERKCMPGVPVCTVLVD 338
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 83/406 (20%), Positives = 169/406 (41%), Gaps = 46/406 (11%)
Query: 124 KKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFK 183
+ G+ + + +L+E + G ++ A +F+ + RP TY +++ F +A +
Sbjct: 10 RPGFQHNTYTCNSLLEVFVNDGCHREAYRVFKDELVTLFRPDDFTYGTLIRGFCKAEQIP 69
Query: 184 EAE-----------------------------------EVFMTLLDEEKSPLKPDQKMFH 208
+A ++F ++D + +KPD ++
Sbjct: 70 QAVNLLGEMKAAGITPTIVTFGSLIRKLCELNFTDKALQIFHQMIDMK---VKPDAFLYT 126
Query: 209 MMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSF---ETNYKEVSKIYDQMQRA 265
++I K + A F M + G VTY L+ +++ +I+++M
Sbjct: 127 VVIGHLCKINKLDLAASYFERMVQSGCLPDKVTYTVLVHSLFKACKWEQGHQIFEEMLSK 186
Query: 266 GLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQA 325
G P++V+YA ++N Y KA R ++AL++ + G P+ Y+ L+D D+A
Sbjct: 187 GHSPELVTYATVVNGYCKAGRIDQALSLMRRLKGTGRSPSGSLYSTLIDGLCKHDRHDEA 246
Query: 326 RTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKG 385
R +F+ D D+ YT+ +S A ++ A+ ++ + G P+ ++Y +I
Sbjct: 247 RELFEMAAGD--VQDVIVYTSFISGLCKAGKLDEAKAVHVKMIEAGCAPDPVSYNVIIYS 304
Query: 386 YAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCG--FP 443
K N + + E+ D+ P + T ++D K++ + A V + M G P
Sbjct: 305 LCKDNRVSEAKELMDQAMERKCMPGVPVCTVLVDGLCKSRRVEEACVILERMLETGDRAP 364
Query: 444 PDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGINGLSISVD 489
++ L K AD ++A +L P + + +D
Sbjct: 365 SVVTYSAVIDGLCK-ADRLDDAYVVLQKMRRAGCVPDVVTYTAIID 409
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 61/242 (25%), Positives = 108/242 (44%), Gaps = 3/242 (1%)
Query: 231 AERGVQQSTVTYNSLMSFETN---YKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARRE 287
A G Q +T T NSL+ N ++E +++ +PD +Y LI + KA +
Sbjct: 9 ARPGFQHNTYTCNSLLEVFVNDGCHREAYRVFKDELVTLFRPDDFTYGTLIRGFCKAEQI 68
Query: 288 EEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTM 347
+A+ + EM AG+ PT + L+ D+A +F M + PD YT +
Sbjct: 69 PQAVNLLGEMKAAGITPTIVTFGSLIRKLCELNFTDKALQIFHQMIDMKVKPDAFLYTVV 128
Query: 348 LSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGI 407
+ + ++ A +F R+ Q G +P+ +TY L+ K E+ +I+++M G
Sbjct: 129 IGHLCKINKLDLAASYFERMVQSGCLPDKVTYTVLVHSLFKACKWEQGHQIFEEMLSKGH 188
Query: 408 KPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANE 467
P + T+++ Y K D A+ + ++ G P + L+ D +EA E
Sbjct: 189 SPELVTYATVVNGYCKAGRIDQALSLMRRLKGTGRSPSGSLYSTLIDGLCKHDRHDEARE 248
Query: 468 LL 469
L
Sbjct: 249 LF 250
>gi|359485848|ref|XP_002267947.2| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
mitochondrial-like [Vitis vinifera]
Length = 1011
Score = 158 bits (399), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 97/376 (25%), Positives = 174/376 (46%), Gaps = 7/376 (1%)
Query: 97 MDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRR 156
+ + ++I + G+ +L M G P+ V +T LM A+ + GR + + I R
Sbjct: 426 LTYSVIINGLCRCGNLQGTNAILREMVMNGLKPNAVVYTTLMTAHAKEGRVEESRMILER 485
Query: 157 MQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKK 216
M+ G P Y ++ F +A + +EA M +L+ L+P+ + I Y K
Sbjct: 486 MREQGILPDVFCYNSLIIGFCKAKRMEEARTYLMEMLERR---LRPNAHTYGAFIDGYSK 542
Query: 217 AGGYEKARKLFALMAERGVQQSTVTYNSLM---SFETNYKEVSKIYDQMQRAGLQPDVVS 273
AG E A + F M GV + Y +L+ E N E ++ + + DV +
Sbjct: 543 AGEMEIADRYFNEMLSCGVLPNVGIYTALIEGHCKEGNVTEAFSVFRFILSRRVLQDVQT 602
Query: 274 YALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMR 333
Y++LI+ + + EA +F E+ + G+ P YN L+ G VD+A + + M
Sbjct: 603 YSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSLISGSCKQGNVDKASQLLEEMC 662
Query: 334 RDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLE 393
+PDI +Y ++ A ++E A+ F ++ G PN +TY ++ GY K N
Sbjct: 663 IKGINPDIVTYNILIDGLCKAGEIERAKNLFDDIEGRGLTPNCVTYAAMVDGYCKSKNPT 722
Query: 394 KMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILL 453
++ ++M + G+ P+ I+ I++ K + F+ A+ ++EM GF ++
Sbjct: 723 AAFQLLEEMLLRGVPPDAFIYNVILNFCCKEEKFEKALDLFQEMLEKGFASTVSFNTLIE 782
Query: 454 SLAKTADERNEANELL 469
K+ + EAN LL
Sbjct: 783 GYCKSG-KLQEANHLL 797
Score = 145 bits (366), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 83/347 (23%), Positives = 172/347 (49%), Gaps = 6/347 (1%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
+I+A+ K G+ A++VL M +KG +P++V++ ++ R A + R M G
Sbjct: 221 MISAHCKVGNVKDAKRVLLEMGEKGCSPNLVTYNVIIGGLCRARLLDEAIELKRSMVDKG 280
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
P TY I++ F + +EA+ + + ++D LKP+ ++ +I + + G E
Sbjct: 281 LVPDLYTYDILINGFCMEKRSREAKLMLLEMID---VGLKPEPITYNALIDGFMRQGDIE 337
Query: 222 KARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSK---IYDQMQRAGLQPDVVSYALLI 278
+A ++ M G++ + + +N+L++ ++ K I +M G++PD +Y+LLI
Sbjct: 338 QAFRIKDEMVACGIEANLIIWNTLLNGVCKAGKMEKALEIMQEMMEKGVEPDSQTYSLLI 397
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCS 338
+ + + A + +EM + PT Y+++++ G + + + M +
Sbjct: 398 EGHCRGQNMARAFELLDEMKKRKLAPTVLTYSVIINGLCRCGNLQGTNAILREMVMNGLK 457
Query: 339 PDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEI 398
P+ YTT+++A+ +E + R+++ G +P+V Y +LI G+ K +E+
Sbjct: 458 PNAVVYTTLMTAHAKEGRVEESRMILERMREQGILPDVFCYNSLIIGFCKAKRMEEARTY 517
Query: 399 YDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPD 445
+M ++PN + +D Y K + + A ++ EM SCG P+
Sbjct: 518 LMEMLERRLRPNAHTYGAFIDGYSKAGEMEIADRYFNEMLSCGVLPN 564
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 81/345 (23%), Positives = 171/345 (49%), Gaps = 12/345 (3%)
Query: 102 LITAYGKQGDFNKAEKVLSF------MNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFR 155
L++ GD K KV F M P V ++T ++ A+ + G K+A+ +
Sbjct: 180 LLSCNSLLGDLLKGNKVELFWKVFDGMCAHKVLPDVYTYTNMISAHCKVGNVKDAKRVLL 239
Query: 156 RMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYK 215
M G P+ +TY +I+ A EA E+ +++D+ L PD + ++I +
Sbjct: 240 EMGEKGCSPNLVTYNVIIGGLCRARLLDEAIELKRSMVDK---GLVPDLYTYDILINGFC 296
Query: 216 KAGGYEKARKLFALMAERGVQQSTVTYNSLMSF---ETNYKEVSKIYDQMQRAGLQPDVV 272
+A+ + M + G++ +TYN+L+ + + ++ +I D+M G++ +++
Sbjct: 297 MEKRSREAKLMLLEMIDVGLKPEPITYNALIDGFMRQGDIEQAFRIKDEMVACGIEANLI 356
Query: 273 SYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCM 332
+ L+N KA + E+AL + +EM++ GV P + Y++L++ + +A + M
Sbjct: 357 IWNTLLNGVCKAGKMEKALEIMQEMMEKGVEPDSQTYSLLIEGHCRGQNMARAFELLDEM 416
Query: 333 RRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNL 392
++ + +P + +Y+ +++ +++G R + +G PN + Y TL+ +AK +
Sbjct: 417 KKRKLAPTVLTYSVIINGLCRCGNLQGTNAILREMVMNGLKPNAVVYTTLMTAHAKEGRV 476
Query: 393 EKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEM 437
E+ I ++MR GI P+ + +++ + K K + A + EM
Sbjct: 477 EESRMILERMREQGILPDVFCYNSLIIGFCKAKRMEEARTYLMEM 521
Score = 131 bits (330), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 93/383 (24%), Positives = 162/383 (42%), Gaps = 43/383 (11%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
LI + +QGD +A ++ M G +++ L+ + G+ + A I + M G
Sbjct: 326 LIDGFMRQGDIEQAFRIKDEMVACGIEANLIIWNTLLNGVCKAGKMEKALEIMQEMMEKG 385
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDE-EKSPLKPDQKMFHMMIYMYKKAGGY 220
P + TY ++++ A E LLDE +K L P + ++I + G
Sbjct: 386 VEPDSQTYSLLIEGHCRGQNMARAFE----LLDEMKKRKLAPTVLTYSVIINGLCRCGNL 441
Query: 221 EKARKLFALMAERGVQQSTVTYNSLMSF---ETNYKEVSKIYDQMQRAGLQPDVVSYALL 277
+ + M G++ + V Y +LM+ E +E I ++M+ G+ PDV Y L
Sbjct: 442 QGTNAILREMVMNGLKPNAVVYTTLMTAHAKEGRVEESRMILERMREQGILPDVFCYNSL 501
Query: 278 INAYGKARREEEALA-----------------------------------VFEEMLDAGV 302
I + KA+R EEA F EML GV
Sbjct: 502 IIGFCKAKRMEEARTYLMEMLERRLRPNAHTYGAFIDGYSKAGEMEIADRYFNEMLSCGV 561
Query: 303 RPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEK 362
P Y L++ G V +A +VF+ + R D+ +Y+ ++ M A
Sbjct: 562 LPNVGIYTALIEGHCKEGNVTEAFSVFRFILSRRVLQDVQTYSVLIHGLSRNGKMHEAFG 621
Query: 363 FFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYG 422
F L++ G +PN TY +LI G K N++K ++ ++M + GI P+ + ++D
Sbjct: 622 IFSELQEKGLLPNAFTYNSLISGSCKQGNVDKASQLLEEMCIKGINPDIVTYNILIDGLC 681
Query: 423 KNKDFDSAVVWYKEMESCGFPPD 445
K + + A + ++E G P+
Sbjct: 682 KAGEIERAKNLFDDIEGRGLTPN 704
Score = 128 bits (322), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 89/392 (22%), Positives = 184/392 (46%), Gaps = 6/392 (1%)
Query: 101 MLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSS 160
+LI + + +A+ +L M G P +++ AL++ + R G + A I M +
Sbjct: 290 ILINGFCMEKRSREAKLMLLEMIDVGLKPEPITYNALIDGFMRQGDIEQAFRIKDEMVAC 349
Query: 161 GPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGY 220
G + + + +L +A K ++A E+ ++++ ++PD + + ++I + +
Sbjct: 350 GIEANLIIWNTLLNGVCKAGKMEKALEIMQEMMEK---GVEPDSQTYSLLIEGHCRGQNM 406
Query: 221 EKARKLFALMAERGVQQSTVTYNSLMSFET---NYKEVSKIYDQMQRAGLQPDVVSYALL 277
+A +L M +R + + +TY+ +++ N + + I +M GL+P+ V Y L
Sbjct: 407 ARAFELLDEMKKRKLAPTVLTYSVIINGLCRCGNLQGTNAILREMVMNGLKPNAVVYTTL 466
Query: 278 INAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRC 337
+ A+ K R EE+ + E M + G+ P YN L+ F + +++ART M R
Sbjct: 467 MTAHAKEGRVEESRMILERMREQGILPDVFCYNSLIIGFCKAKRMEEARTYLMEMLERRL 526
Query: 338 SPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMME 397
P+ +Y + Y A +ME A+++F + G +PNV Y LI+G+ K N+ +
Sbjct: 527 RPNAHTYGAFIDGYSKAGEMEIADRYFNEMLSCGVLPNVGIYTALIEGHCKEGNVTEAFS 586
Query: 398 IYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAK 457
++ + + + ++ ++ +N A + E++ G P+ N L+S +
Sbjct: 587 VFRFILSRRVLQDVQTYSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSLISGSC 646
Query: 458 TADERNEANELLGNFNHPNNEPGINGLSISVD 489
++A++LL P I +I +D
Sbjct: 647 KQGNVDKASQLLEEMCIKGINPDIVTYNILID 678
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 88/374 (23%), Positives = 170/374 (45%), Gaps = 7/374 (1%)
Query: 99 FLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQ 158
+ +LI + G ++A + S + +KG P+ ++ +L+ + G A + M
Sbjct: 603 YSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSLISGSCKQGNVDKASQLLEEMC 662
Query: 159 SSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAG 218
G P +TY I++ +A + + A+ +F D E L P+ + M+ Y K+
Sbjct: 663 IKGINPDIVTYNILIDGLCKAGEIERAKNLFD---DIEGRGLTPNCVTYAAMVDGYCKSK 719
Query: 219 GYEKARKLFALMAERGVQQSTVTYNSLMSF---ETNYKEVSKIYDQMQRAGLQPDVVSYA 275
A +L M RGV YN +++F E +++ ++ +M G VS+
Sbjct: 720 NPTAAFQLLEEMLLRGVPPDAFIYNVILNFCCKEEKFEKALDLFQEMLEKGF-ASTVSFN 778
Query: 276 LLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRD 335
LI Y K+ + +EA + EEM++ P H Y L+D +GM+ +A+ ++ M+
Sbjct: 779 TLIEGYCKSGKLQEANHLLEEMIEKQFIPNHVTYTSLIDHNCKAGMMGEAKRLWLEMQER 838
Query: 336 RCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKM 395
P +YT++L Y N +M F + G P+ +TY +I Y + N+ +
Sbjct: 839 NVMPTAKTYTSLLHGYHNIGNMSEVSALFEEMVAKGIEPDKMTYYVMIDAYCREGNVMEA 898
Query: 396 MEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSL 455
++ D++ V G+ + + ++ A K ++F + E+ GF +++
Sbjct: 899 CKLKDEILVKGMPMSVAAYDALIQALCKKEEFFEVLKLLNEIGESGFRLGLPTCSVIARG 958
Query: 456 AKTADERNEANELL 469
+ A +EA E+L
Sbjct: 959 FQIAGNMDEAAEVL 972
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 91/364 (25%), Positives = 159/364 (43%), Gaps = 41/364 (11%)
Query: 128 APSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEE 187
+P+ V LM++Y + G A +F ++ RPS L+ +L ++ NK + +
Sbjct: 142 SPNSVIFDMLMDSYRKMGFLVEAVNVFLGPKNFEFRPSLLSCNSLLGDLLKGNKVELFWK 201
Query: 188 VFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMS 247
VF + + + PD + MI + K G + A+++ M E+G + VTYN ++
Sbjct: 202 VFDGMCAHK---VLPDVYTYTNMISAHCKVGNVKDAKRVLLEMGEKGCSPNLVTYNVIIG 258
Query: 248 FETNYK---EVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRP 304
+ E ++ M GL PD+ +Y +LIN + +R EA + EM+D G++P
Sbjct: 259 GLCRARLLDEAIELKRSMVDKGLVPDLYTYDILINGFCMEKRSREAKLMLLEMIDVGLKP 318
Query: 305 THKAYNILLDAFAISGMVDQARTV----FKC----------------------------- 331
YN L+D F G ++QA + C
Sbjct: 319 EPITYNALIDGFMRQGDIEQAFRIKDEMVACGIEANLIIWNTLLNGVCKAGKMEKALEIM 378
Query: 332 --MRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKV 389
M PD +Y+ ++ + +M A + +K+ P V+TY +I G +
Sbjct: 379 QEMMEKGVEPDSQTYSLLIEGHCRGQNMARAFELLDEMKKRKLAPTVLTYSVIINGLCRC 438
Query: 390 NNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAK 449
NL+ I +M +NG+KPN ++TT+M A+ K + + + + M G PD
Sbjct: 439 GNLQGTNAILREMVMNGLKPNAVVYTTLMTAHAKEGRVEESRMILERMREQGILPDVFCY 498
Query: 450 NILL 453
N L+
Sbjct: 499 NSLI 502
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 89/375 (23%), Positives = 170/375 (45%), Gaps = 12/375 (3%)
Query: 71 KQLKKWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPS 130
K + + + SE+ E + + + +N LI+ KQG+ +KA ++L M KG P
Sbjct: 615 KMHEAFGIFSELQEKGLLPNAFTYNS-----LISGSCKQGNVDKASQLLEEMCIKGINPD 669
Query: 131 VVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFM 190
+V++ L++ + G + A+ +F ++ G P+ +TY ++ + K K F
Sbjct: 670 IVTYNILIDGLCKAGEIERAKNLFDDIEGRGLTPNCVTYAAMVDGYC---KSKNPTAAFQ 726
Query: 191 TLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLM---S 247
L + + PD ++++++ K +EKA LF M E+G STV++N+L+
Sbjct: 727 LLEEMLLRGVPPDAFIYNVILNFCCKEEKFEKALDLFQEMLEKGFA-STVSFNTLIEGYC 785
Query: 248 FETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHK 307
+E + + ++M P+ V+Y LI+ KA EA ++ EM + V PT K
Sbjct: 786 KSGKLQEANHLLEEMIEKQFIPNHVTYTSLIDHNCKAGMMGEAKRLWLEMQERNVMPTAK 845
Query: 308 AYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRL 367
Y LL + G + + +F+ M PD +Y M+ AY ++ A K +
Sbjct: 846 TYTSLLHGYHNIGNMSEVSALFEEMVAKGIEPDKMTYYVMIDAYCREGNVMEACKLKDEI 905
Query: 368 KQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDF 427
G +V Y LI+ K +++++ +++ +G + + I + +
Sbjct: 906 LVKGMPMSVAAYDALIQALCKKEEFFEVLKLLNEIGESGFRLGLPTCSVIARGFQIAGNM 965
Query: 428 DSAVVWYKEMESCGF 442
D A + M G+
Sbjct: 966 DEAAEVLRSMVKFGW 980
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 70/291 (24%), Positives = 132/291 (45%), Gaps = 3/291 (1%)
Query: 202 PDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMS--FETNYKEVS-KI 258
P+ +F M++ Y+K G +A +F + S ++ NSL+ + N E+ K+
Sbjct: 143 PNSVIFDMLMDSYRKMGFLVEAVNVFLGPKNFEFRPSLLSCNSLLGDLLKGNKVELFWKV 202
Query: 259 YDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAI 318
+D M + PDV +Y +I+A+ K ++A V EM + G P YN+++
Sbjct: 203 FDGMCAHKVLPDVYTYTNMISAHCKVGNVKDAKRVLLEMGEKGCSPNLVTYNVIIGGLCR 262
Query: 319 SGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVIT 378
+ ++D+A + + M PD+ +Y +++ + A+ + G P IT
Sbjct: 263 ARLLDEAIELKRSMVDKGLVPDLYTYDILINGFCMEKRSREAKLMLLEMIDVGLKPEPIT 322
Query: 379 YGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEME 438
Y LI G+ + ++E+ I D+M GI+ N I+ T+++ K + A+ +EM
Sbjct: 323 YNALIDGFMRQGDIEQAFRIKDEMVACGIEANLIIWNTLLNGVCKAGKMEKALEIMQEMM 382
Query: 439 SCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGINGLSISVD 489
G PD + ++L+ A ELL P + S+ ++
Sbjct: 383 EKGVEPDSQTYSLLIEGHCRGQNMARAFELLDEMKKRKLAPTVLTYSVIIN 433
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/263 (23%), Positives = 120/263 (45%), Gaps = 7/263 (2%)
Query: 108 KQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSAL 167
K+ F KA + M +KG+A S VS L+E Y + G+ + A + M P+ +
Sbjct: 752 KEEKFEKALDLFQEMLEKGFA-STVSFNTLIEGYCKSGKLQEANHLLEEMIEKQFIPNHV 810
Query: 168 TYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLF 227
TY ++ +A EA+ ++ L+ ++ + P K + +++ Y G + LF
Sbjct: 811 TYTSLIDHNCKAGMMGEAKRLW---LEMQERNVMPTAKTYTSLLHGYHNIGNMSEVSALF 867
Query: 228 ALMAERGVQQSTVTYNSLM---SFETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKA 284
M +G++ +TY ++ E N E K+ D++ G+ V +Y LI A K
Sbjct: 868 EEMVAKGIEPDKMTYYVMIDAYCREGNVMEACKLKDEILVKGMPMSVAAYDALIQALCKK 927
Query: 285 RREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSY 344
E L + E+ ++G R +++ F I+G +D+A V + M + + S
Sbjct: 928 EEFFEVLKLLNEIGESGFRLGLPTCSVIARGFQIAGNMDEAAEVLRSMVKFGWVSNTTSL 987
Query: 345 TTMLSAYVNASDMEGAEKFFRRL 367
++ N ++ E ++ +++
Sbjct: 988 GDLVDGNQNGANSEDSDNLLKQM 1010
Score = 43.5 bits (101), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 32/142 (22%), Positives = 63/142 (44%)
Query: 327 TVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGY 386
++ KC R SP+ + ++ +Y + A F K F P++++ +L+
Sbjct: 131 SIVKCYRSCNGSPNSVIFDMLMDSYRKMGFLVEAVNVFLGPKNFEFRPSLLSCNSLLGDL 190
Query: 387 AKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQ 446
K N +E +++D M + + P+ +T ++ A+ K + A EM G P+
Sbjct: 191 LKGNKVELFWKVFDGMCAHKVLPDVYTYTNMISAHCKVGNVKDAKRVLLEMGEKGCSPNL 250
Query: 447 KAKNILLSLAKTADERNEANEL 468
N+++ A +EA EL
Sbjct: 251 VTYNVIIGGLCRARLLDEAIEL 272
>gi|302771417|ref|XP_002969127.1| hypothetical protein SELMODRAFT_61162 [Selaginella moellendorffii]
gi|300163632|gb|EFJ30243.1| hypothetical protein SELMODRAFT_61162 [Selaginella moellendorffii]
Length = 646
Score = 157 bits (398), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 97/375 (25%), Positives = 183/375 (48%), Gaps = 8/375 (2%)
Query: 75 KWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVL-SFMNKKGYAPSVVS 133
KW EV EW+R + + +++ G A ++ S + Y+ V +
Sbjct: 17 KWKKALEVFEWIRKHDCFKLRGVATASILSVLGNHEQLPAALELFESLKQDESYSLDVYA 76
Query: 134 HTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVE-ANKFKEAEEVFMTL 192
+T+L+ R R+ +F MQ G R +A+TY ++L L+ + + + + +F +
Sbjct: 77 YTSLISILSRARRFDEGITLFETMQREGQRGNAVTYNVMLDLYGKRGDSWDRIQSLFQEM 136
Query: 193 LDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETN- 251
D E SP D ++ MI + ++A +LF M E G + VTYN+L+
Sbjct: 137 KDLEISP---DDYTYNTMITACIQNSHCQEALRLFQEMKEAGCCPNRVTYNALLDVYGKG 193
Query: 252 --YKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAY 309
+KE S++ +M+ AG+ P++V+Y LI AY +A +EA A+ + +L G+ P Y
Sbjct: 194 GMHKEASELLVEMEAAGISPNIVTYNELIAAYARAGLCDEAAALKKSLLSKGLCPDEFTY 253
Query: 310 NILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQ 369
L+ AF + ++A F MR+ C+P+I +Y ++ Y ++ K F+ +++
Sbjct: 254 CTLISAFNRAERYEKALETFTEMRKTNCTPNIVTYNILIDIYGRMEKLDDMMKVFKFMQE 313
Query: 370 DGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDS 429
P+++T+ +L+K + L ++ ++ +M+ G P F +++ YG+ D
Sbjct: 314 KNCTPDLVTWNSLLKSFGNCGMLTEVSNVFREMKRAGYMPGVDTFNILIECYGRCGYVDY 373
Query: 430 AVVWYKEMESCGFPP 444
+V YK + G P
Sbjct: 374 SVDIYKGLLRTGLQP 388
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 84/363 (23%), Positives = 168/363 (46%), Gaps = 7/363 (1%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + + +LI YG+ + KV FM +K P +V+ +L++++G G +F
Sbjct: 284 NIVTYNILIDIYGRMEKLDDMMKVFKFMQEKNCTPDLVTWNSLLKSFGNCGMLTEVSNVF 343
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
R M+ +G P T+ I+++ + + +++ LL ++ L+P F ++
Sbjct: 344 REMKRAGYMPGVDTFNILIECYGRCGYVDYSVDIYKGLL---RTGLQPTVPTFAALMASL 400
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETN---YKEVSKIYDQMQRAGLQP-D 270
+ G +++ K+ MAE G+Q S + L+ N + ++ K D+++++ QP
Sbjct: 401 AREGRWQQCEKVSQEMAEAGLQLSDACHAGLIHSYANSGQFFQLRKYIDELEKSAKQPLS 460
Query: 271 VVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFK 330
+ + AY K + EA ++ D G P K +N ++ A G +++A + +
Sbjct: 461 GILCKTFVLAYCKCCMDNEAQLALNQLYDNGHSPDIKVFNAMISMCAKRGWIERAVKLLE 520
Query: 331 CMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVN 390
+R+ + PD +Y ++S Y AE+ +++ G PN+ITY TL+ Y K
Sbjct: 521 EIRKAQLKPDGVTYNCLMSMYGREGMYHKAEEVMSEMRRAGKAPNLITYNTLLYSYTKHG 580
Query: 391 NLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKN 450
++ ++ M ++P+ F T++ +Y + A+ + M G P Q
Sbjct: 581 RMDDAARVFGDMVAARVRPDNFTFNTLVGSYSSLGLYKEALSVIEYMTEHGCQPTQITFK 640
Query: 451 ILL 453
LL
Sbjct: 641 ALL 643
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 88/358 (24%), Positives = 159/358 (44%), Gaps = 7/358 (1%)
Query: 137 LMEAYGRGGRYKNAEAIFRRMQSSGP-RPSALTYQIILKLFVEANKFKEAEEVFMTLLDE 195
++A GR G++K A +F ++ + + IL + + A E+F +L +
Sbjct: 8 FVKALGRQGKWKKALEVFEWIRKHDCFKLRGVATASILSVLGNHEQLPAALELFESLKQD 67
Query: 196 EKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFET----N 251
E L D + +I + +A +++ LF M G + + VTYN ++ +
Sbjct: 68 ESYSL--DVYAYTSLISILSRARRFDEGITLFETMQREGQRGNAVTYNVMLDLYGKRGDS 125
Query: 252 YKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNI 311
+ + ++ +M+ + PD +Y +I A + +EAL +F+EM +AG P YN
Sbjct: 126 WDRIQSLFQEMKDLEISPDDYTYNTMITACIQNSHCQEALRLFQEMKEAGCCPNRVTYNA 185
Query: 312 LLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDG 371
LLD + GM +A + M SP+I +Y +++AY A + A + L G
Sbjct: 186 LLDVYGKGGMHKEASELLVEMEAAGISPNIVTYNELIAAYARAGLCDEAAALKKSLLSKG 245
Query: 372 FVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAV 431
P+ TY TLI + + EK +E + +MR PN + ++D YG+ + D +
Sbjct: 246 LCPDEFTYCTLISAFNRAERYEKALETFTEMRKTNCTPNIVTYNILIDIYGRMEKLDDMM 305
Query: 432 VWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGINGLSISVD 489
+K M+ PD N LL E + + PG++ +I ++
Sbjct: 306 KVFKFMQEKNCTPDLVTWNSLLKSFGNCGMLTEVSNVFREMKRAGYMPGVDTFNILIE 363
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 99/424 (23%), Positives = 182/424 (42%), Gaps = 42/424 (9%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + + L+ YGK G +A ++L M G +P++V++ L+ AY R G A A+
Sbjct: 179 NRVTYNALLDVYGKGGMHKEASELLVEMEAAGISPNIVTYNELIAAYARAGLCDEAAALK 238
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
+ + S G P TY ++ F A ++++A E F + K+ P+ ++++I +Y
Sbjct: 239 KSLLSKGLCPDEFTYCTLISAFNRAERYEKALETFTEM---RKTNCTPNIVTYNILIDIY 295
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETN---YKEVSKIYDQMQRAGLQPDV 271
+ + K+F M E+ VT+NSL+ N EVS ++ +M+RAG P V
Sbjct: 296 GRMEKLDDMMKVFKFMQEKNCTPDLVTWNSLLKSFGNCGMLTEVSNVFREMKRAGYMPGV 355
Query: 272 VSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKC 331
++ +LI YG+ + ++ +++ +L G++PT + L+ + A G Q V +
Sbjct: 356 DTFNILIECYGRCGYVDYSVDIYKGLLRTGLQPTVPTFAALMASLAREGRWQQCEKVSQE 415
Query: 332 MRR------DRCSPD-ICSYT-----------------------------TMLSAYVNAS 355
M D C I SY T + AY
Sbjct: 416 MAEAGLQLSDACHAGLIHSYANSGQFFQLRKYIDELEKSAKQPLSGILCKTFVLAYCKCC 475
Query: 356 DMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFT 415
A+ +L +G P++ + +I AK +E+ +++ +++R +KP+ +
Sbjct: 476 MDNEAQLALNQLYDNGHSPDIKVFNAMISMCAKRGWIERAVKLLEEIRKAQLKPDGVTYN 535
Query: 416 TIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHP 475
+M YG+ + A EM G P+ N LL ++A + G+
Sbjct: 536 CLMSMYGREGMYHKAEEVMSEMRRAGKAPNLITYNTLLYSYTKHGRMDDAARVFGDMVAA 595
Query: 476 NNEP 479
P
Sbjct: 596 RVRP 599
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 83/393 (21%), Positives = 185/393 (47%), Gaps = 10/393 (2%)
Query: 95 NEMDFLMLITAYGKQGD-FNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAI 153
N + + +++ YGK+GD +++ + + M +P ++ ++ A + + A +
Sbjct: 108 NAVTYNVMLDLYGKRGDSWDRIQSLFQEMKDLEISPDDYTYNTMITACIQNSHCQEALRL 167
Query: 154 FRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYM 213
F+ M+ +G P+ +TY +L ++ + KEA E+ L++ E + + P+ ++ +I
Sbjct: 168 FQEMKEAGCCPNRVTYNALLDVYGKGGMHKEASEL---LVEMEAAGISPNIVTYNELIAA 224
Query: 214 YKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSF---ETNYKEVSKIYDQMQRAGLQPD 270
Y +AG ++A L + +G+ TY +L+S Y++ + + +M++ P+
Sbjct: 225 YARAGLCDEAAALKKSLLSKGLCPDEFTYCTLISAFNRAERYEKALETFTEMRKTNCTPN 284
Query: 271 VVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFK 330
+V+Y +LI+ YG+ + ++ + VF+ M + P +N LL +F GM+ + VF+
Sbjct: 285 IVTYNILIDIYGRMEKLDDMMKVFKFMQEKNCTPDLVTWNSLLKSFGNCGMLTEVSNVFR 344
Query: 331 CMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVN 390
M+R P + ++ ++ Y ++ + ++ L + G P V T+ L+ A+
Sbjct: 345 EMKRAGYMPGVDTFNILIECYGRCGYVDYSVDIYKGLLRTGLQPTVPTFAALMASLAREG 404
Query: 391 NLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQK--A 448
++ ++ +M G++ + ++ +Y + F + E+E P
Sbjct: 405 RWQQCEKVSQEMAEAGLQLSDACHAGLIHSYANSGQFFQLRKYIDELEKSAKQPLSGILC 464
Query: 449 KNILLSLAKTADERNEANELLGNFNHPNNEPGI 481
K +L+ K + NEA L + P I
Sbjct: 465 KTFVLAYCKCCMD-NEAQLALNQLYDNGHSPDI 496
>gi|302758676|ref|XP_002962761.1| hypothetical protein SELMODRAFT_165305 [Selaginella moellendorffii]
gi|300169622|gb|EFJ36224.1| hypothetical protein SELMODRAFT_165305 [Selaginella moellendorffii]
Length = 707
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 102/373 (27%), Positives = 177/373 (47%), Gaps = 13/373 (3%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
LI+ KQ + ++A+ ++ G+ P VV+++ L + + GR A + + M +G
Sbjct: 86 LISGLCKQQNVDRAKTLVDEFVSSGFVPDVVTYSILADGLCKRGRIDEAFELVKEMSGNG 145
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
P+ +TY ++ +A+K ++A E+ TL+ S PD + +++ K G +
Sbjct: 146 CTPNLVTYNTLIDGLCKASKTEKAYELLETLV---SSGFVPDVVTYTIIVDGLCKEGRLD 202
Query: 222 KARKLFALMAERGVQQSTVTYNSLM---SFETNYKEVSKIYDQMQRAGLQPDVVSYALLI 278
KA K+ M +RG S +TY +LM E I+ +M D ++Y L+
Sbjct: 203 KALKMVEGMLKRGCTPSVITYTALMEGLCRTGRVDEAHHIFKEMVSKDCTADALAYVSLV 262
Query: 279 NAYGKARREEEALAVFEEMLDAGVR--PTHKAYNILLDAFAISGMVDQARTVFKCMRRDR 336
N Y K+ R +EA V + G+R P YN L+D + G +D+ VF+ M
Sbjct: 263 NGYCKSSRTKEAQKVVD-----GIRGTPYIDVYNALMDGYCKEGRLDEIPNVFEDMACRG 317
Query: 337 CSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMM 396
C P+I +Y ++ ++ A F + G VP+V++Y +I G K + ++
Sbjct: 318 CVPNIKTYNIVMDGLCKHGKVDEAFPFLESMHSAGCVPDVVSYNIIIDGLFKASKPKEAR 377
Query: 397 EIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLA 456
++ D+M GI P+ + T+M + K + FD AV K M G PD N L+S
Sbjct: 378 QVLDQMIQAGIPPDAVTYNTLMAQFCKEERFDDAVGILKNMIKAGVDPDNVTYNTLISGL 437
Query: 457 KTADERNEANELL 469
+ +A EL+
Sbjct: 438 SQTNRLGDAYELM 450
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 99/383 (25%), Positives = 178/383 (46%), Gaps = 11/383 (2%)
Query: 101 MLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSS 160
+LI K +KA ++L M +G P V+ ++M+ + G+++ A ++ M
Sbjct: 15 ILIDGLCKASKTDKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGKFERAHSLLAVMAER 74
Query: 161 GPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDE-EKSPLKPDQKMFHMMIYMYKKAGG 219
RPS TY ++ + A+ TL+DE S PD + ++ K G
Sbjct: 75 NCRPSCCTYNTLISGLCKQQNVDRAK----TLVDEFVSSGFVPDVVTYSILADGLCKRGR 130
Query: 220 YEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSKIYDQMQ---RAGLQPDVVSYAL 276
++A +L M+ G + VTYN+L+ + K Y+ ++ +G PDVV+Y +
Sbjct: 131 IDEAFELVKEMSGNGCTPNLVTYNTLIDGLCKASKTEKAYELLETLVSSGFVPDVVTYTI 190
Query: 277 LINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDR 336
+++ K R ++AL + E ML G P+ Y L++ +G VD+A +FK M
Sbjct: 191 IVDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGLCRTGRVDEAHHIFKEMVSKD 250
Query: 337 CSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMM 396
C+ D +Y ++++ Y +S + A+K ++ P + Y L+ GY K L+++
Sbjct: 251 CTADALAYVSLVNGYCKSSRTKEAQKVVDGIRG---TPYIDVYNALMDGYCKEGRLDEIP 307
Query: 397 EIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLA 456
+++ M G PN + +MD K+ D A + + M S G PD + NI++
Sbjct: 308 NVFEDMACRGCVPNIKTYNIVMDGLCKHGKVDEAFPFLESMHSAGCVPDVVSYNIIIDGL 367
Query: 457 KTADERNEANELLGNFNHPNNEP 479
A + EA ++L P
Sbjct: 368 FKASKPKEARQVLDQMIQAGIPP 390
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 74/276 (26%), Positives = 125/276 (45%), Gaps = 35/276 (12%)
Query: 164 PSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKA 223
P TY I++ +A+K +A E+ ++D + PD F+ ++ KAG +E+A
Sbjct: 8 PDVFTYNILIDGLCKASKTDKASEMLHEMVDR---GVTPDTVTFNSIMDGLCKAGKFERA 64
Query: 224 RKLFALMAERGVQQSTVTYNSLMSFETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGK 283
L A+MAER + S TYN+L I+ K
Sbjct: 65 HSLLAVMAERNCRPSCCTYNTL--------------------------------ISGLCK 92
Query: 284 ARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICS 343
+ + A + +E + +G P Y+IL D G +D+A + K M + C+P++ +
Sbjct: 93 QQNVDRAKTLVDEFVSSGFVPDVVTYSILADGLCKRGRIDEAFELVKEMSGNGCTPNLVT 152
Query: 344 YTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMR 403
Y T++ AS E A + L GFVP+V+TY ++ G K L+K +++ + M
Sbjct: 153 YNTLIDGLCKASKTEKAYELLETLVSSGFVPDVVTYTIIVDGLCKEGRLDKALKMVEGML 212
Query: 404 VNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMES 439
G P+ +T +M+ + D A +KEM S
Sbjct: 213 KRGCTPSVITYTALMEGLCRTGRVDEAHHIFKEMVS 248
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 99/410 (24%), Positives = 173/410 (42%), Gaps = 50/410 (12%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
L+ Y K+G ++ V M +G P++ ++ +M+ + G+ A M S+G
Sbjct: 293 LMDGYCKEGRLDEIPNVFEDMACRGCVPNIKTYNIVMDGLCKHGKVDEAFPFLESMHSAG 352
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
P ++Y II+ +A+K KEA +V ++ ++ + PD ++ ++ + K ++
Sbjct: 353 CVPDVVSYNIIIDGLFKASKPKEARQVLDQMI---QAGIPPDAVTYNTLMAQFCKEERFD 409
Query: 222 KARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSKIYDQMQRAGLQPDVVS----YALL 277
A + M + GV VTYN+L+S + + Y+ M VVS Y +
Sbjct: 410 DAVGILKNMIKAGVDPDNVTYNTLISGLSQTNRLGDAYELMHEMLRNGCVVSACTTYNTI 469
Query: 278 INAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRC 337
I+ K ++AL + + M GV YNI +D G +D+A ++ M R
Sbjct: 470 IDRLCKEGCLKQALLLMDHMTGHGVEANTVTYNIFIDRLCKEGRLDEASSLLSEMDTLR- 528
Query: 338 SPDICSYTTMLSAYVNASDMEGAEKFFRRLK----------------------------- 368
D SYTT++ A ++ A K R +
Sbjct: 529 --DEVSYTTVIIGLCKAEQLDRASKLAREMVAVKGLCITSHTFNLLIDAFTKTKRLDEAL 586
Query: 369 -------QDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAY 421
Q G P+VITY +I K++ ++K E++D+M V GI + +T ++
Sbjct: 587 TLLELMVQRGCSPSVITYNMVITCLCKLDKVDKAWELFDEMAVRGIVASSVSYTVLIYGL 646
Query: 422 GKNKDFDSAVVWYKEMES--CGFPPDQKAKNILLSLAKTADERNEANELL 469
A+ +EM S C D K + + L+L + EA ELL
Sbjct: 647 CGQGRGKEALQVLEEMASSDCEI-DDLKCRKLYLAL-RGQGRGEEAAELL 694
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 93/192 (48%)
Query: 262 MQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGM 321
M + PDV +Y +LI+ KA + ++A + EM+D GV P +N ++D +G
Sbjct: 1 MNERKVAPDVFTYNILIDGLCKASKTDKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGK 60
Query: 322 VDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGT 381
++A ++ M C P C+Y T++S +++ A+ GFVP+V+TY
Sbjct: 61 FERAHSLLAVMAERNCRPSCCTYNTLISGLCKQQNVDRAKTLVDEFVSSGFVPDVVTYSI 120
Query: 382 LIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCG 441
L G K +++ E+ +M NG PN + T++D K + A + + S G
Sbjct: 121 LADGLCKRGRIDEAFELVKEMSGNGCTPNLVTYNTLIDGLCKASKTEKAYELLETLVSSG 180
Query: 442 FPPDQKAKNILL 453
F PD I++
Sbjct: 181 FVPDVVTYTIIV 192
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 74/306 (24%), Positives = 140/306 (45%), Gaps = 9/306 (2%)
Query: 101 MLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSS 160
++I K +A +VL M + G P V++ LM + + R+ +A I + M +
Sbjct: 362 IIIDGLFKASKPKEARQVLDQMIQAGIPPDAVTYNTLMAQFCKEERFDDAVGILKNMIKA 421
Query: 161 GPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGY 220
G P +TY ++ + N+ +A E+ +L + ++ +I K G
Sbjct: 422 GVDPDNVTYNTLISGLSQTNRLGDAYELMHEML--RNGCVVSACTTYNTIIDRLCKEGCL 479
Query: 221 EKARKLFALMAERGVQQSTVTYNSL---MSFETNYKEVSKIYDQMQRAGLQPDVVSYALL 277
++A L M GV+ +TVTYN + E E S + +M D VSY +
Sbjct: 480 KQALLLMDHMTGHGVEANTVTYNIFIDRLCKEGRLDEASSLLSEMDTL---RDEVSYTTV 536
Query: 278 INAYGKARREEEALAVFEEMLDA-GVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDR 336
I KA + + A + EM+ G+ T +N+L+DAF + +D+A T+ + M +
Sbjct: 537 IIGLCKAEQLDRASKLAREMVAVKGLCITSHTFNLLIDAFTKTKRLDEALTLLELMVQRG 596
Query: 337 CSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMM 396
CSP + +Y +++ ++ A + F + G V + ++Y LI G ++ +
Sbjct: 597 CSPSVITYNMVITCLCKLDKVDKAWELFDEMAVRGIVASSVSYTVLIYGLCGQGRGKEAL 656
Query: 397 EIYDKM 402
++ ++M
Sbjct: 657 QVLEEM 662
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 76/188 (40%)
Query: 302 VRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAE 361
V P YNIL+D + D+A + M +PD ++ +++ A E A
Sbjct: 6 VAPDVFTYNILIDGLCKASKTDKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGKFERAH 65
Query: 362 KFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAY 421
+ + P+ TY TLI G K N+++ + D+ +G P+ ++ + D
Sbjct: 66 SLLAVMAERNCRPSCCTYNTLISGLCKQQNVDRAKTLVDEFVSSGFVPDVVTYSILADGL 125
Query: 422 GKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGI 481
K D A KEM G P+ N L+ A + +A ELL P +
Sbjct: 126 CKRGRIDEAFELVKEMSGNGCTPNLVTYNTLIDGLCKASKTEKAYELLETLVSSGFVPDV 185
Query: 482 NGLSISVD 489
+I VD
Sbjct: 186 VTYTIIVD 193
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/258 (21%), Positives = 112/258 (43%), Gaps = 11/258 (4%)
Query: 88 IQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPS-VVSHTALMEAYGRGGR 146
I++ D + + + LI+ + A +++ M + G S ++ +++ + G
Sbjct: 419 IKAGVDPDNVTYNTLISGLSQTNRLGDAYELMHEMLRNGCVVSACTTYNTIIDRLCKEGC 478
Query: 147 YKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKM 206
K A + M G + +TY I + + + EA + E L+ D+
Sbjct: 479 LKQALLLMDHMTGHGVEANTVTYNIFIDRLCKEGRLDEASSLL-----SEMDTLR-DEVS 532
Query: 207 FHMMIYMYKKAGGYEKARKLF-ALMAERGVQQSTVTYNSLMSFETNYK---EVSKIYDQM 262
+ +I KA ++A KL ++A +G+ ++ T+N L+ T K E + + M
Sbjct: 533 YTTVIIGLCKAEQLDRASKLAREMVAVKGLCITSHTFNLLIDAFTKTKRLDEALTLLELM 592
Query: 263 QRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMV 322
+ G P V++Y ++I K + ++A +F+EM G+ + +Y +L+ G
Sbjct: 593 VQRGCSPSVITYNMVITCLCKLDKVDKAWELFDEMAVRGIVASSVSYTVLIYGLCGQGRG 652
Query: 323 DQARTVFKCMRRDRCSPD 340
+A V + M C D
Sbjct: 653 KEALQVLEEMASSDCEID 670
>gi|125544564|gb|EAY90703.1| hypothetical protein OsI_12306 [Oryza sativa Indica Group]
Length = 644
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 114/470 (24%), Positives = 213/470 (45%), Gaps = 16/470 (3%)
Query: 9 FMQKRRKVEVFKDAADEAGKKNWRRLMNQIEEVGS---AVAVLRSERTRGQPLPKDLVL- 64
F R +E N ++N I E G AV +LR G D+V
Sbjct: 162 FRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFG--CEADIVSY 219
Query: 65 -GTLVRLKQLKKWNVVSEVL-EWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFM 122
L L K+W V E++ E +R+ N + F LI + G F + +VL+ M
Sbjct: 220 NAVLKGLCMAKRWGDVEELMDEMVRVDC--APNIVTFNTLIGYLCRNGLFERVHEVLAQM 277
Query: 123 NKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKF 182
++ G P + + +++ + G + A I RM S G +P+ + Y +LK A ++
Sbjct: 278 SEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERW 337
Query: 183 KEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTY 242
KEAEE+ + ++ PL D F++++ + + G ++ +L M G +TY
Sbjct: 338 KEAEELLSEMFQKD-CPL--DDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITY 394
Query: 243 NSLMSF---ETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLD 299
++++ E E + M G +P+ VSY +++ A R +A + +M+
Sbjct: 395 TTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQ 454
Query: 300 AGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEG 359
G P +N L++ G+V+QA + K M + CSPD+ SY+T++ A E
Sbjct: 455 QGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEE 514
Query: 360 AEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMD 419
A + + G PN I Y ++ ++ + K+++++D ++ I+ + ++ ++
Sbjct: 515 ALELLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQMFDNIKDTTIRSDAVLYNAVIS 574
Query: 420 AYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELL 469
+ K + D A+ ++ M S G P++ +L+ + EA ELL
Sbjct: 575 SLCKRWETDRAIDFFAYMVSNGCMPNESTYTMLIKGLASEGLAKEAQELL 624
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 95/414 (22%), Positives = 174/414 (42%), Gaps = 43/414 (10%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKN----- 149
N F ++ +G A +VL M+ KG AP + ++EA R G ++N
Sbjct: 110 NAYTFFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVL 169
Query: 150 ------------------------------AEAIFRRMQSSGPRPSALTYQIILKLFVEA 179
A + R++ G ++Y +LK A
Sbjct: 170 EAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMA 229
Query: 180 NKFKEAEEVFMTLLDE-EKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQS 238
++ + EE L+DE + P+ F+ +I + G +E+ ++ A M+E G
Sbjct: 230 KRWGDVEE----LMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPD 285
Query: 239 TVTYNSL---MSFETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFE 295
Y ++ + E + + ++I ++M GL+P+VV Y ++ A R +EA +
Sbjct: 286 IRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLS 345
Query: 296 EMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNAS 355
EM +NIL+D F +G+VD+ + + M C PD+ +YTT+++ +
Sbjct: 346 EMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEG 405
Query: 356 DMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFT 415
++ A + + G PN ++Y ++KG E+ +M G PN F
Sbjct: 406 LIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFN 465
Query: 416 TIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELL 469
T+++ K + A+ K+M G PD + + ++ A + EA ELL
Sbjct: 466 TLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELL 519
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 68/326 (20%), Positives = 135/326 (41%), Gaps = 44/326 (13%)
Query: 131 VVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFM 190
VV++ A++ Y R G+ A + + P+A T+ +++ + +A EV
Sbjct: 79 VVAYNAMVAGYCRAGQLAAARRLAAAVPVP---PNAYTFFPVVRGLCTRGRIADALEVLD 135
Query: 191 TLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSF-- 248
+ + +P+ P M+H+++ ++GG+ + ++ M +G T N +++
Sbjct: 136 EMSFKGCAPIPP---MYHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAIC 192
Query: 249 -ETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHK 307
+ E + ++ G + D+VSY ++ A+R + EE++D VR
Sbjct: 193 EQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDV----EELMDEMVR---- 244
Query: 308 AYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRL 367
VD C+P+I ++ T++ E + ++
Sbjct: 245 --------------VD-------------CAPNIVTFNTLIGYLCRNGLFERVHEVLAQM 277
Query: 368 KQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDF 427
+ G P++ Y T+I G K +LE EI ++M G+KPN + T++ + +
Sbjct: 278 SEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERW 337
Query: 428 DSAVVWYKEMESCGFPPDQKAKNILL 453
A EM P D NIL+
Sbjct: 338 KEAEELLSEMFQKDCPLDDVTFNILV 363
>gi|108709396|gb|ABF97191.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|215687193|dbj|BAG91758.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222625245|gb|EEE59377.1| hypothetical protein OsJ_11489 [Oryza sativa Japonica Group]
Length = 644
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 114/470 (24%), Positives = 213/470 (45%), Gaps = 16/470 (3%)
Query: 9 FMQKRRKVEVFKDAADEAGKKNWRRLMNQIEEVGS---AVAVLRSERTRGQPLPKDLVL- 64
F R +E N ++N I E G AV +LR G D+V
Sbjct: 162 FRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFG--CEADIVSY 219
Query: 65 -GTLVRLKQLKKWNVVSEVL-EWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFM 122
L L K+W V E++ E +R+ N + F LI + G F + +VL+ M
Sbjct: 220 NAVLKGLCMAKRWGDVEELMDEMVRVDC--APNIVTFNTLIGYLCRNGLFERVHEVLAQM 277
Query: 123 NKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKF 182
++ G P + + +++ + G + A I RM S G +P+ + Y +LK A ++
Sbjct: 278 SEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERW 337
Query: 183 KEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTY 242
KEAEE+ + ++ PL D F++++ + + G ++ +L M G +TY
Sbjct: 338 KEAEELLSEMFQKD-CPL--DDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITY 394
Query: 243 NSLMSF---ETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLD 299
++++ E E + M G +P+ VSY +++ A R +A + +M+
Sbjct: 395 TTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQ 454
Query: 300 AGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEG 359
G P +N L++ G+V+QA + K M + CSPD+ SY+T++ A E
Sbjct: 455 QGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEE 514
Query: 360 AEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMD 419
A + + G PN I Y ++ ++ + K+++++D ++ I+ + ++ ++
Sbjct: 515 ALELLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQMFDNIKDTTIRSDAVLYNAVIS 574
Query: 420 AYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELL 469
+ K + D A+ ++ M S G P++ +L+ + EA ELL
Sbjct: 575 SLCKRWETDRAIDFFAYMVSNGCMPNESTYTMLIKGLASEGLAKEAQELL 624
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 95/414 (22%), Positives = 174/414 (42%), Gaps = 43/414 (10%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKN----- 149
N F ++ +G A +VL M+ KG AP + ++EA R G ++N
Sbjct: 110 NAYTFFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVL 169
Query: 150 ------------------------------AEAIFRRMQSSGPRPSALTYQIILKLFVEA 179
A + R++ G ++Y +LK A
Sbjct: 170 EAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMA 229
Query: 180 NKFKEAEEVFMTLLDE-EKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQS 238
++ + EE L+DE + P+ F+ +I + G +E+ ++ A M+E G
Sbjct: 230 KRWGDVEE----LMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPD 285
Query: 239 TVTYNSL---MSFETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFE 295
Y ++ + E + + ++I ++M GL+P+VV Y ++ A R +EA +
Sbjct: 286 IRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLS 345
Query: 296 EMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNAS 355
EM +NIL+D F +G+VD+ + + M C PD+ +YTT+++ +
Sbjct: 346 EMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEG 405
Query: 356 DMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFT 415
++ A + + G PN ++Y ++KG E+ +M G PN F
Sbjct: 406 LIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFN 465
Query: 416 TIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELL 469
T+++ K + A+ K+M G PD + + ++ A + EA ELL
Sbjct: 466 TLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELL 519
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 68/326 (20%), Positives = 135/326 (41%), Gaps = 44/326 (13%)
Query: 131 VVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFM 190
VV++ A++ Y R G+ A + + P+A T+ +++ + +A EV
Sbjct: 79 VVAYNAMVAGYCRAGQLAAARRLAAAVPVP---PNAYTFFPVVRGLCTRGRIADALEVLD 135
Query: 191 TLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSF-- 248
+ + +P+ P M+H+++ ++GG+ + ++ M +G T N +++
Sbjct: 136 EMSFKGCAPIPP---MYHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAIC 192
Query: 249 -ETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHK 307
+ E + ++ G + D+VSY ++ A+R + EE++D VR
Sbjct: 193 EQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDV----EELMDEMVR---- 244
Query: 308 AYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRL 367
VD C+P+I ++ T++ E + ++
Sbjct: 245 --------------VD-------------CAPNIVTFNTLIGYLCRNGLFERVHEVLAQM 277
Query: 368 KQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDF 427
+ G P++ Y T+I G K +LE EI ++M G+KPN + T++ + +
Sbjct: 278 SEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERW 337
Query: 428 DSAVVWYKEMESCGFPPDQKAKNILL 453
A EM P D NIL+
Sbjct: 338 KEAEELLSEMFQKDCPLDDVTFNILV 363
>gi|449532420|ref|XP_004173179.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g05670, mitochondrial-like [Cucumis sativus]
Length = 748
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 91/361 (25%), Positives = 179/361 (49%), Gaps = 6/361 (1%)
Query: 99 FLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQ 158
+ LI + K G A K M K +P +++T L++ +G+GG+ + +F M
Sbjct: 366 YTTLIHGFFKLGHVRTANKWFDEMLSKKISPDYITYTTLIQGFGQGGKVIEPQNLFHEMI 425
Query: 159 SSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAG 218
S G +P +TY ++ ++ +A + A + ++ + + P+ + +I K G
Sbjct: 426 SRGLKPDEVTYTTLIDVYCKAGEMVNAFSLHNEMV---QMGMTPNIVTYGALIDGLCKHG 482
Query: 219 GYEKARKLFALMAERGVQQSTVTYNSLMSFET---NYKEVSKIYDQMQRAGLQPDVVSYA 275
+ A +L M ++G+Q + YNS+++ N ++ K+ +M+ AG+ PD ++Y
Sbjct: 483 ELDTANELLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAITYT 542
Query: 276 LLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRD 335
+I+AY + ++A + +EMLD G++PT +N+L++ F + GM++ + M
Sbjct: 543 TVIDAYCRLGDIDKAHKLLQEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLGWMLEK 602
Query: 336 RCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKM 395
PD +Y T++ + + M K ++R++ G P+ TY LIKG+ K NL++
Sbjct: 603 GIVPDAITYNTLMKQHCIRNSMNTTTKIYKRMRNQGVAPDSNTYNILIKGHCKARNLKEA 662
Query: 396 MEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSL 455
+Y +M G P T + ++ + K + F A ++EM G D + N + +
Sbjct: 663 WFLYKEMIEKGYVPTVTSYNALIKRFYKKRKFXEARELFEEMRGHGLVADGEIYNFFVDM 722
Query: 456 A 456
Sbjct: 723 C 723
Score = 155 bits (391), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 99/371 (26%), Positives = 179/371 (48%), Gaps = 6/371 (1%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
+I K G +AEKVL M + P V +T L+ + + G + A F M S
Sbjct: 334 IILLLCKIGKSFEAEKVLREMMSQKIIPDNVVYTTLIHGFFKLGHVRTANKWFDEMLSKK 393
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
P +TY +++ F + K E + +F ++ LKPD+ + +I +Y KAG
Sbjct: 394 ISPDYITYTTLIQGFGQGGKVIEPQNLFHEMISR---GLKPDEVTYTTLIDVYCKAGEMV 450
Query: 222 KARKLFALMAERGVQQSTVTYNSLMSFETNYKEV---SKIYDQMQRAGLQPDVVSYALLI 278
A L M + G+ + VTY +L+ + E+ +++ D+M++ GLQ +V Y ++
Sbjct: 451 NAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGELDTANELLDEMRKKGLQLNVCIYNSMV 510
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCS 338
N KA E+A+ + +EM AG+ P Y ++DA+ G +D+A + + M
Sbjct: 511 NGICKAGNIEQAIKLMKEMEVAGIDPDAITYTTVIDAYCRLGDIDKAHKLLQEMLDRGLQ 570
Query: 339 PDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEI 398
P + ++ +++ + +E ++ + + G VP+ ITY TL+K + N++ +I
Sbjct: 571 PTVVTFNVLMNGFCMLGMLEDGDRLLGWMLEKGIVPDAITYNTLMKQHCIRNSMNTTTKI 630
Query: 399 YDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKT 458
Y +MR G+ P+ + ++ + K ++ A YKEM G+ P + N L+
Sbjct: 631 YKRMRNQGVAPDSNTYNILIKGHCKARNLKEAWFLYKEMIEKGYVPTVTSYNALIKRFYK 690
Query: 459 ADERNEANELL 469
+ EA EL
Sbjct: 691 KRKFXEARELF 701
Score = 135 bits (339), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 101/382 (26%), Positives = 166/382 (43%), Gaps = 8/382 (2%)
Query: 91 WWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNA 150
+W N + F + + G ++A K+L + G +V S A + +
Sbjct: 185 YWGPNPIAFDIFFQVLVEIGHLSEARKLLDKLLSYGLVVTVDSCNAFLSRIANNS--EGI 242
Query: 151 EAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMM 210
E + G + +Y II+ K KEA + M + D S PD + +
Sbjct: 243 EMAIKVFCEYGISWNTTSYNIIIYSLCRLGKVKEAHRLLMQM-DFRSS--TPDVVSYSTV 299
Query: 211 IYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYK---EVSKIYDQMQRAGL 267
I Y G +KA KL M +G++ + TYNS++ E K+ +M +
Sbjct: 300 IDGYCHLGELKKALKLMDDMQIKGLKPNRYTYNSIILLLCKIGKSFEAEKVLREMMSQKI 359
Query: 268 QPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQART 327
PD V Y LI+ + K A F+EML + P + Y L+ F G V + +
Sbjct: 360 IPDNVVYTTLIHGFFKLGHVRTANKWFDEMLSKKISPDYITYTTLIQGFGQGGKVIEPQN 419
Query: 328 VFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYA 387
+F M PD +YTT++ Y A +M A + Q G PN++TYG LI G
Sbjct: 420 LFHEMISRGLKPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLC 479
Query: 388 KVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQK 447
K L+ E+ D+MR G++ N I+ ++++ K + + A+ KEME G PD
Sbjct: 480 KHGELDTANELLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAI 539
Query: 448 AKNILLSLAKTADERNEANELL 469
++ + ++A++LL
Sbjct: 540 TYTTVIDAYCRLGDIDKAHKLL 561
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 72/329 (21%), Positives = 142/329 (43%), Gaps = 43/329 (13%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
+E+ + LI Y K G+ A + + M + G P++V++ AL++ + G A +
Sbjct: 432 DEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGELDTANELL 491
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDE-EKSPLKPDQKMFHMMIYM 213
M+ G + + Y ++ +A ++A + L+ E E + + PD + +I
Sbjct: 492 DEMRKKGLQLNVCIYNSMVNGICKAGNIEQA----IKLMKEMEVAGIDPDAITYTTVIDA 547
Query: 214 YKKAGGYEKARKLFALMAERGVQQSTVTYNSLM---SFETNYKEVSKIYDQMQRAGLQPD 270
Y + G +KA KL M +RG+Q + VT+N LM ++ ++ M G+ PD
Sbjct: 548 YCRLGDIDKAHKLLQEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLGWMLEKGIVPD 607
Query: 271 VVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFK 330
++Y L+ + +++ M + GV P YNIL
Sbjct: 608 AITYNTLMKQHCIRNSMNTTTKIYKRMRNQGVAPDSNTYNIL------------------ 649
Query: 331 CMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVN 390
+ + A +++ A ++ + + G+VP V +Y LIK + K
Sbjct: 650 -----------------IKGHCKARNLKEAWFLYKEMIEKGYVPTVTSYNALIKRFYKKR 692
Query: 391 NLEKMMEIYDKMRVNGIKPNQTIFTTIMD 419
+ E++++MR +G+ + I+ +D
Sbjct: 693 KFXEARELFEEMRGHGLVADGEIYNFFVD 721
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 90/181 (49%), Gaps = 6/181 (3%)
Query: 93 DFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEA 152
D + + + +I AY + GD +KA K+L M +G P+VV+ LM + G ++ +
Sbjct: 535 DPDAITYTTVIDAYCRLGDIDKAHKLLQEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGDR 594
Query: 153 IFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIY 212
+ M G P A+TY ++K N +++ + ++ + PD ++++I
Sbjct: 595 LLGWMLEKGIVPDAITYNTLMKQHCIRNSMNTTTKIYKRMRNQ---GVAPDSNTYNILIK 651
Query: 213 MYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSF---ETNYKEVSKIYDQMQRAGLQP 269
+ KA ++A L+ M E+G + +YN+L+ + + E +++++M+ GL
Sbjct: 652 GHCKARNLKEAWFLYKEMIEKGYVPTVTSYNALIKRFYKKRKFXEARELFEEMRGHGLVA 711
Query: 270 D 270
D
Sbjct: 712 D 712
>gi|357125122|ref|XP_003564244.1| PREDICTED: pentatricopeptide repeat-containing protein At5g48730,
chloroplastic-like [Brachypodium distachyon]
Length = 502
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 95/365 (26%), Positives = 192/365 (52%), Gaps = 8/365 (2%)
Query: 58 LPKDLVLGTLVRLKQLKKWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEK 117
LP+ ++ R+ L+ W +V E +R Q W+ ++ LIT GK KA +
Sbjct: 114 LPRTVLEALHERIAALR-WESALKVFELMRDQVWYRPYVGIYIKLITMLGKCKQPGKAHE 172
Query: 118 VLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSS-GPRPSALTYQIILKLF 176
+ M +G AP++ S+TAL+ AY R G + A ++ RM+++ G RP TY I++K
Sbjct: 173 LFQAMVDEGCAPNLESYTALVSAYSRSGSFDRAFSLLDRMKATPGCRPDVQTYSILIKSC 232
Query: 177 VEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGY-EKARKLFALMAERGV 235
+ A F + +++ L D ++P+ ++ ++ Y KAG + E L +++E+
Sbjct: 233 LHAYDFDKVKDL---LADMACGGIRPNTVTYNTLVDAYGKAGRFAEMESTLLEMLSEKCK 289
Query: 236 QQSTVTYNSLMSFETN--YKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAV 293
++L +F ++ + + Y++ Q +G+ P++ +Y +L+++YGKA+ E+ AV
Sbjct: 290 PDVWTMNSTLRAFGSSGQIEMMESCYEKFQASGISPNIKTYNILLDSYGKAKMYEKMGAV 349
Query: 294 FEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVN 353
E M T YN+++DAF +G ++Q +F+ M+ DR P+ + +++ AY
Sbjct: 350 MEYMQKYYYSWTIVTYNVVIDAFGRAGDLEQMEYIFRLMKSDRIKPNCVTLCSLIRAYGR 409
Query: 354 ASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTI 413
A ++ E R ++ +++ + L+ Y +V L +M ++ + M++ + P++
Sbjct: 410 ADQVKKIETVLRIIENSDTTLDIVFFNCLVDAYGRVGCLAEMWDVLNMMKLERVSPDKVT 469
Query: 414 FTTIM 418
TT++
Sbjct: 470 CTTMI 474
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 71/283 (25%), Positives = 138/283 (48%), Gaps = 8/283 (2%)
Query: 146 RYKNAEAIFRRMQSS-GPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQ 204
R+++A +F M+ RP Y ++ + + + +A E+F ++DE +P +
Sbjct: 130 RWESALKVFELMRDQVWYRPYVGIYIKLITMLGKCKQPGKAHELFQAMVDEGCAP---NL 186
Query: 205 KMFHMMIYMYKKAGGYEKARKLFALM-AERGVQQSTVTYNSLMSFETNYKEVSKIYD--- 260
+ + ++ Y ++G +++A L M A G + TY+ L+ + + K+ D
Sbjct: 187 ESYTALVSAYSRSGSFDRAFSLLDRMKATPGCRPDVQTYSILIKSCLHAYDFDKVKDLLA 246
Query: 261 QMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISG 320
M G++P+ V+Y L++AYGKA R E + EML +P N L AF SG
Sbjct: 247 DMACGGIRPNTVTYNTLVDAYGKAGRFAEMESTLLEMLSEKCKPDVWTMNSTLRAFGSSG 306
Query: 321 MVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYG 380
++ + ++ + SP+I +Y +L +Y A E +++ + ++TY
Sbjct: 307 QIEMMESCYEKFQASGISPNIKTYNILLDSYGKAKMYEKMGAVMEYMQKYYYSWTIVTYN 366
Query: 381 TLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGK 423
+I + + +LE+M I+ M+ + IKPN +++ AYG+
Sbjct: 367 VVIDAFGRAGDLEQMEYIFRLMKSDRIKPNCVTLCSLIRAYGR 409
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 99/199 (49%), Gaps = 2/199 (1%)
Query: 257 KIYDQMQ-RAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDA 315
K+++ M+ + +P V Y LI GK ++ +A +F+ M+D G P ++Y L+ A
Sbjct: 136 KVFELMRDQVWYRPYVGIYIKLITMLGKCKQPGKAHELFQAMVDEGCAPNLESYTALVSA 195
Query: 316 FAISGMVDQARTVFKCMRRDR-CSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVP 374
++ SG D+A ++ M+ C PD+ +Y+ ++ + ++A D + + + G P
Sbjct: 196 YSRSGSFDRAFSLLDRMKATPGCRPDVQTYSILIKSCLHAYDFDKVKDLLADMACGGIRP 255
Query: 375 NVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWY 434
N +TY TL+ Y K +M +M KP+ + + A+G + + Y
Sbjct: 256 NTVTYNTLVDAYGKAGRFAEMESTLLEMLSEKCKPDVWTMNSTLRAFGSSGQIEMMESCY 315
Query: 435 KEMESCGFPPDQKAKNILL 453
++ ++ G P+ K NILL
Sbjct: 316 EKFQASGISPNIKTYNILL 334
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 89/208 (42%), Gaps = 2/208 (0%)
Query: 284 ARREEEALAVFEEMLD-AGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDIC 342
A R E AL VFE M D RP Y L+ +A +F+ M + C+P++
Sbjct: 128 ALRWESALKVFELMRDQVWYRPYVGIYIKLITMLGKCKQPGKAHELFQAMVDEGCAPNLE 187
Query: 343 SYTTMLSAYVNASDMEGAEKFFRRLKQD-GFVPNVITYGTLIKGYAKVNNLEKMMEIYDK 401
SYT ++SAY + + A R+K G P+V TY LIK + +K+ ++
Sbjct: 188 SYTALVSAYSRSGSFDRAFSLLDRMKATPGCRPDVQTYSILIKSCLHAYDFDKVKDLLAD 247
Query: 402 MRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADE 461
M GI+PN + T++DAYGK F EM S PD N L ++ +
Sbjct: 248 MACGGIRPNTVTYNTLVDAYGKAGRFAEMESTLLEMLSEKCKPDVWTMNSTLRAFGSSGQ 307
Query: 462 RNEANELLGNFNHPNNEPGINGLSISVD 489
F P I +I +D
Sbjct: 308 IEMMESCYEKFQASGISPNIKTYNILLD 335
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/233 (24%), Positives = 105/233 (45%), Gaps = 6/233 (2%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + + L+ AYGK G F + E L M + P V + + + A+G G+ + E+ +
Sbjct: 256 NTVTYNTLVDAYGKAGRFAEMESTLLEMLSEKCKPDVWTMNSTLRAFGSSGQIEMMESCY 315
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
+ Q+SG P+ TY I+L + +A +++ V + +K ++++I +
Sbjct: 316 EKFQASGISPNIKTYNILLDSYGKAKMYEKMGAVMEYM---QKYYYSWTIVTYNVVIDAF 372
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSKIYDQM---QRAGLQPDV 271
+AG E+ +F LM ++ + VT SL+ +V KI + + + D+
Sbjct: 373 GRAGDLEQMEYIFRLMKSDRIKPNCVTLCSLIRAYGRADQVKKIETVLRIIENSDTTLDI 432
Query: 272 VSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQ 324
V + L++AYG+ E V M V P ++ F + G+ D
Sbjct: 433 VFFNCLVDAYGRVGCLAEMWDVLNMMKLERVSPDKVTCTTMIKWFLVKGIDDH 485
>gi|242067235|ref|XP_002448894.1| hypothetical protein SORBIDRAFT_05g000986 [Sorghum bicolor]
gi|241934737|gb|EES07882.1| hypothetical protein SORBIDRAFT_05g000986 [Sorghum bicolor]
Length = 796
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 95/368 (25%), Positives = 177/368 (48%), Gaps = 12/368 (3%)
Query: 111 DFNKAEKVLSFMNK------KGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRP 164
D N+AE+ L ++ + P++VS+ ++ + G+ A +F M G P
Sbjct: 178 DENRAEEALELLHMMADGQVRSCPPNLVSYNTVINGFFTEGQVDKAYNLFLDMTDQGIPP 237
Query: 165 SALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKAR 224
+ +TY I++ +A AE VF ++D+ ++P+ + +I+ Y G +++
Sbjct: 238 NVVTYTIVIDGLCKAQVVDRAEGVFQQMIDK---GVRPNIVTYTCLIHGYLSIGQWKEVV 294
Query: 225 KLFALMAERGVQQSTVTYNSLMSF---ETNYKEVSKIYDQMQRAGLQPDVVSYALLINAY 281
++ M+ G++ TY L+ + + E K++D M R G++PDV Y ++++ Y
Sbjct: 295 RMLKEMSAHGLEPDCFTYGLLLDYLCKKGKCTEARKLFDSMIRKGIKPDVSIYGIILHGY 354
Query: 282 GKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDI 341
E + + M+ G+ P H +NI+ AFA M+ +A +F MR+ SP++
Sbjct: 355 ATKGALSEMHSFLDLMVGNGISPNHYIFNIVFCAFAKKAMIGEAMDIFNKMRQQGLSPNV 414
Query: 342 CSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDK 401
+Y T++ A ++ AE F ++ +G PN++ + +L+ G ++ EK E++ +
Sbjct: 415 VNYATLIDALCKLGRVDDAELKFNQMINEGVAPNIVVFTSLVYGLCTIDKWEKAGELFFE 474
Query: 402 MRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADE 461
M GI PN F TIM A ME G PD + N L+ +
Sbjct: 475 MVNQGIHPNVVFFNTIMCNLCTEGRVMKAQRLIDLMERVGTRPDIISYNALIRGHCLVGK 534
Query: 462 RNEANELL 469
+EA++LL
Sbjct: 535 TDEASKLL 542
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 97/408 (23%), Positives = 190/408 (46%), Gaps = 6/408 (1%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + + ++I K ++AE V M KG P++V++T L+ Y G++K +
Sbjct: 238 NVVTYTIVIDGLCKAQVVDRAEGVFQQMIDKGVRPNIVTYTCLIHGYLSIGQWKEVVRML 297
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
+ M + G P TY ++L + K EA ++F +++ + +KPD ++ ++++ Y
Sbjct: 298 KEMSAHGLEPDCFTYGLLLDYLCKKGKCTEARKLFDSMI---RKGIKPDVSIYGIILHGY 354
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSLMSF---ETNYKEVSKIYDQMQRAGLQPDV 271
G + LM G+ + +N + + E I+++M++ GL P+V
Sbjct: 355 ATKGALSEMHSFLDLMVGNGISPNHYIFNIVFCAFAKKAMIGEAMDIFNKMRQQGLSPNV 414
Query: 272 VSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKC 331
V+YA LI+A K R ++A F +M++ GV P + L+ ++A +F
Sbjct: 415 VNYATLIDALCKLGRVDDAELKFNQMINEGVAPNIVVFTSLVYGLCTIDKWEKAGELFFE 474
Query: 332 MRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNN 391
M P++ + T++ + A++ +++ G P++I+Y LI+G+ V
Sbjct: 475 MVNQGIHPNVVFFNTIMCNLCTEGRVMKAQRLIDLMERVGTRPDIISYNALIRGHCLVGK 534
Query: 392 LEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNI 451
++ ++ D M G+KPN+ + T++ Y ++ D A ++EM S G P N
Sbjct: 535 TDEASKLLDIMLSVGLKPNECTYNTLLHGYCRDGRIDDAYSVFQEMLSNGITPVVVTYNT 594
Query: 452 LLSLAKTADERNEANELLGNFNHPNNEPGINGLSISVDEEDDDDDDDE 499
+L +EA EL N + I +I ++ ++ DE
Sbjct: 595 ILHGLFKTRRFSEAKELYLNMITSGKQWSIYTYNIILNGLSKNNCVDE 642
Score = 139 bits (349), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 88/332 (26%), Positives = 155/332 (46%), Gaps = 7/332 (2%)
Query: 152 AIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMI 211
+ RRM G P+ ++Y +LK F + N+ +EA E+ + D + P+ ++ +I
Sbjct: 152 VLLRRMSELGCTPNVVSYNTLLKGFCDENRAEEALELLHMMADGQVRSCPPNLVSYNTVI 211
Query: 212 YMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSK---IYDQMQRAGLQ 268
+ G +KA LF M ++G+ + VTY ++ + V + ++ QM G++
Sbjct: 212 NGFFTEGQVDKAYNLFLDMTDQGIPPNVVTYTIVIDGLCKAQVVDRAEGVFQQMIDKGVR 271
Query: 269 PDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTV 328
P++V+Y LI+ Y + +E + + +EM G+ P Y +LLD G +AR +
Sbjct: 272 PNIVTYTCLIHGYLSIGQWKEVVRMLKEMSAHGLEPDCFTYGLLLDYLCKKGKCTEARKL 331
Query: 329 FKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAK 388
F M R PD+ Y +L Y + F + +G PN + + +AK
Sbjct: 332 FDSMIRKGIKPDVSIYGIILHGYATKGALSEMHSFLDLMVGNGISPNHYIFNIVFCAFAK 391
Query: 389 VNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKA 448
+ + M+I++KMR G+ PN + T++DA K D A + + +M + G P+
Sbjct: 392 KAMIGEAMDIFNKMRQQGLSPNVVNYATLIDALCKLGRVDDAELKFNQMINEGVAPNIVV 451
Query: 449 KNILLSLAKTADERNEANELLGNFN----HPN 476
L+ T D+ +A EL HPN
Sbjct: 452 FTSLVYGLCTIDKWEKAGELFFEMVNQGIHPN 483
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 87/370 (23%), Positives = 172/370 (46%), Gaps = 9/370 (2%)
Query: 118 VLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPR---PSALTYQIILK 174
+L M++ G P+VVS+ L++ + R + A + M R P+ ++Y ++
Sbjct: 153 LLRRMSELGCTPNVVSYNTLLKGFCDENRAEEALELLHMMADGQVRSCPPNLVSYNTVIN 212
Query: 175 LFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERG 234
F + +A +F+ + D+ + P+ + ++I KA ++A +F M ++G
Sbjct: 213 GFFTEGQVDKAYNLFLDMTDQ---GIPPNVVTYTIVIDGLCKAQVVDRAEGVFQQMIDKG 269
Query: 235 VQQSTVTYNSLMSFETN---YKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEAL 291
V+ + VTY L+ + +KEV ++ +M GL+PD +Y LL++ K + EA
Sbjct: 270 VRPNIVTYTCLIHGYLSIGQWKEVVRMLKEMSAHGLEPDCFTYGLLLDYLCKKGKCTEAR 329
Query: 292 AVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAY 351
+F+ M+ G++P Y I+L +A G + + + M + SP+ + + A+
Sbjct: 330 KLFDSMIRKGIKPDVSIYGIILHGYATKGALSEMHSFLDLMVGNGISPNHYIFNIVFCAF 389
Query: 352 VNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQ 411
+ + A F +++Q G PNV+ Y TLI K+ ++ +++M G+ PN
Sbjct: 390 AKKAMIGEAMDIFNKMRQQGLSPNVVNYATLIDALCKLGRVDDAELKFNQMINEGVAPNI 449
Query: 412 TIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGN 471
+FT+++ ++ A + EM + G P+ N ++ T +A L+
Sbjct: 450 VVFTSLVYGLCTIDKWEKAGELFFEMVNQGIHPNVVFFNTIMCNLCTEGRVMKAQRLIDL 509
Query: 472 FNHPNNEPGI 481
P I
Sbjct: 510 MERVGTRPDI 519
Score = 129 bits (323), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 89/399 (22%), Positives = 182/399 (45%), Gaps = 41/399 (10%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N F ++ A+ K+ +A + + M ++G +P+VV++ L++A + GR +AE F
Sbjct: 378 NHYIFNIVFCAFAKKAMIGEAMDIFNKMRQQGLSPNVVNYATLIDALCKLGRVDDAELKF 437
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
+M + G P+ + + ++ +K+++A E+F ++++ + P+ F+ ++
Sbjct: 438 NQMINEGVAPNIVVFTSLVYGLCTIDKWEKAGELFFEMVNQ---GIHPNVVFFNTIMCNL 494
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSLM---SFETNYKEVSKIYDQMQRAGLQPDV 271
G KA++L LM G + ++YN+L+ E SK+ D M GL+P+
Sbjct: 495 CTEGRVMKAQRLIDLMERVGTRPDIISYNALIRGHCLVGKTDEASKLLDIMLSVGLKPNE 554
Query: 272 VSYALLINAYGKARREEEALAVFEEMLDAGVRP--------------------------- 304
+Y L++ Y + R ++A +VF+EML G+ P
Sbjct: 555 CTYNTLLHGYCRDGRIDDAYSVFQEMLSNGITPVVVTYNTILHGLFKTRRFSEAKELYLN 614
Query: 305 --------THKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASD 356
+ YNI+L+ + + VD+A +F+ + DI ++ M+ A +
Sbjct: 615 MITSGKQWSIYTYNIILNGLSKNNCVDEALKMFQSLCSKDLQVDIITFNIMIGALLKDGR 674
Query: 357 MEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTT 416
E A F + +G VP+V TY + + + +LE+ ++ +M +G PN +
Sbjct: 675 KEDAMNLFATISANGLVPDVTTYRLIAENLIEEGSLEEFDGMFSEMEKSGCAPNSLMLNF 734
Query: 417 IMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSL 455
++ D A + +++ F + ++L+SL
Sbjct: 735 LVRRLLLRGDISRAGAYLSKIDEKNFSLEASTTSMLISL 773
Score = 128 bits (321), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 76/348 (21%), Positives = 163/348 (46%), Gaps = 6/348 (1%)
Query: 101 MLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSS 160
+++ Y +G ++ L M G +P+ + A+ + A IF +M+
Sbjct: 349 IILHGYATKGALSEMHSFLDLMVGNGISPNHYIFNIVFCAFAKKAMIGEAMDIFNKMRQQ 408
Query: 161 GPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGY 220
G P+ + Y ++ + + +AE F +++E + P+ +F ++Y +
Sbjct: 409 GLSPNVVNYATLIDALCKLGRVDDAELKFNQMINE---GVAPNIVVFTSLVYGLCTIDKW 465
Query: 221 EKARKLFALMAERGVQQSTVTYNSLMS---FETNYKEVSKIYDQMQRAGLQPDVVSYALL 277
EKA +LF M +G+ + V +N++M E + ++ D M+R G +PD++SY L
Sbjct: 466 EKAGELFFEMVNQGIHPNVVFFNTIMCNLCTEGRVMKAQRLIDLMERVGTRPDIISYNAL 525
Query: 278 INAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRC 337
I + + +EA + + ML G++P YN LL + G +D A +VF+ M +
Sbjct: 526 IRGHCLVGKTDEASKLLDIMLSVGLKPNECTYNTLLHGYCRDGRIDDAYSVFQEMLSNGI 585
Query: 338 SPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMME 397
+P + +Y T+L A++ + + G ++ TY ++ G +K N +++ ++
Sbjct: 586 TPVVVTYNTILHGLFKTRRFSEAKELYLNMITSGKQWSIYTYNIILNGLSKNNCVDEALK 645
Query: 398 IYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPD 445
++ + ++ + F ++ A K+ + A+ + + + G PD
Sbjct: 646 MFQSLCSKDLQVDIITFNIMIGALLKDGRKEDAMNLFATISANGLVPD 693
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 77/347 (22%), Positives = 136/347 (39%), Gaps = 10/347 (2%)
Query: 152 AIFRRM---QSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFH 208
+ F RM S P TY I++ F + + F +L
Sbjct: 77 SCFNRMIRDCCSKVAPDVFTYSILVGCFCRMGRLEHGFAAFGLILKTGWRVNDVVVVNRL 136
Query: 209 MMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSF---ETNYKEVSKIYDQM--- 262
+ K G E L M+E G + V+YN+L+ E +E ++ M
Sbjct: 137 LKGLCDAKRVG-EAMGVLLRRMSELGCTPNVVSYNTLLKGFCDENRAEEALELLHMMADG 195
Query: 263 QRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMV 322
Q P++VSY +IN + + ++A +F +M D G+ P Y I++D + +V
Sbjct: 196 QVRSCPPNLVSYNTVINGFFTEGQVDKAYNLFLDMTDQGIPPNVVTYTIVIDGLCKAQVV 255
Query: 323 DQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTL 382
D+A VF+ M P+I +YT ++ Y++ + + + + G P+ TYG L
Sbjct: 256 DRAEGVFQQMIDKGVRPNIVTYTCLIHGYLSIGQWKEVVRMLKEMSAHGLEPDCFTYGLL 315
Query: 383 IKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGF 442
+ K + +++D M GIKP+ +I+ I+ Y + M G
Sbjct: 316 LDYLCKKGKCTEARKLFDSMIRKGIKPDVSIYGIILHGYATKGALSEMHSFLDLMVGNGI 375
Query: 443 PPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGINGLSISVD 489
P+ NI+ EA ++ P + + +D
Sbjct: 376 SPNHYIFNIVFCAFAKKAMIGEAMDIFNKMRQQGLSPNVVNYATLID 422
>gi|357138821|ref|XP_003570985.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g35130-like [Brachypodium distachyon]
Length = 613
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 107/445 (24%), Positives = 204/445 (45%), Gaps = 47/445 (10%)
Query: 61 DLVLGTLVRLKQLKKWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLS 120
D +L V+L+ ++W+ + V EW+ +S + + + + +LI AYG++ NKAE + +
Sbjct: 152 DDILNVAVQLRLNRQWDPIISVCEWIVYRSSFRPDIICYNLLIDAYGRKRQLNKAESIYA 211
Query: 121 FMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEAN 180
+ + P+ ++ L+ AY AE + MQ G PSA Y L ++A
Sbjct: 212 AVLEAQCVPTEDTYALLLRAYCNARSLHRAEGVISEMQEHGIPPSATVYNAYLDGLLKAR 271
Query: 181 KFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTV 240
+A EV+ + +K + + + + +MI +Y K+ A K+F M G + +
Sbjct: 272 CTVKAVEVYQRM---KKERCRTNTETYTLMINVYGKSKQPMSAMKIFNEMQSIGCKANIC 328
Query: 241 TYNSLM---SFETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEM 297
TY +L+ + E ++ ++++QMQ+AG +PDV +Y L+ AY +A + A +F M
Sbjct: 329 TYTALVNAFAREGLCEKAEEVFEQMQQAGHEPDVYAYNALMEAYSRAGFPQGASEIFSLM 388
Query: 298 LDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDM 357
G P +YNIL+DA+ +G+ +A F+ +++ +P + S+ +LSA+ + ++
Sbjct: 389 QHMGCEPDRASYNILVDAYGRAGLHREAEATFESLKQQGMAPTMKSHMLLLSAHARSGNV 448
Query: 358 EGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKM--------------- 402
E+ +L + G P+ ++ YA+ L+ M + M
Sbjct: 449 GRCEQVMAQLHKSGLRPDTFALNAMLHAYARAGRLDDMERLLAAMDLAGSADVGSHNVAV 508
Query: 403 ------------------------RVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEME 438
+ GI + +T+ M Y + K++ + ++EM
Sbjct: 509 NAYARAGYLGRMEAAFEGIRRRKGKKGGIDADVVSWTSRMGGYARKKEYGKCLEIFEEMV 568
Query: 439 SCGFPPDQKAKNILLSLAKTADERN 463
G PD +L +A +DER
Sbjct: 569 DAGCYPDAGTAKVL--MAACSDERQ 591
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 69/312 (22%), Positives = 144/312 (46%), Gaps = 8/312 (2%)
Query: 163 RPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEK 222
RP + Y +++ + + +AE ++ +L+ + P + + +++ Y A +
Sbjct: 184 RPDIICYNLLIDAYGRKRQLNKAESIYAAVLEAQ---CVPTEDTYALLLRAYCNARSLHR 240
Query: 223 ARKLFALMAERGVQQSTVTYNS----LMSFETNYKEVSKIYDQMQRAGLQPDVVSYALLI 278
A + + M E G+ S YN+ L+ K V ++Y +M++ + + +Y L+I
Sbjct: 241 AEGVISEMQEHGIPPSATVYNAYLDGLLKARCTVKAV-EVYQRMKKERCRTNTETYTLMI 299
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCS 338
N YGK+++ A+ +F EM G + Y L++AFA G+ ++A VF+ M++
Sbjct: 300 NVYGKSKQPMSAMKIFNEMQSIGCKANICTYTALVNAFAREGLCEKAEEVFEQMQQAGHE 359
Query: 339 PDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEI 398
PD+ +Y ++ AY A +GA + F ++ G P+ +Y L+ Y + +
Sbjct: 360 PDVYAYNALMEAYSRAGFPQGASEIFSLMQHMGCEPDRASYNILVDAYGRAGLHREAEAT 419
Query: 399 YDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKT 458
++ ++ G+ P ++ A+ ++ + ++ G PD A N +L
Sbjct: 420 FESLKQQGMAPTMKSHMLLLSAHARSGNVGRCEQVMAQLHKSGLRPDTFALNAMLHAYAR 479
Query: 459 ADERNEANELLG 470
A ++ LL
Sbjct: 480 AGRLDDMERLLA 491
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 76/293 (25%), Positives = 125/293 (42%), Gaps = 53/293 (18%)
Query: 94 FNEMD----------FLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGR 143
FNEM + L+ A+ ++G KAE+V M + G+ P V ++ ALMEAY R
Sbjct: 315 FNEMQSIGCKANICTYTALVNAFAREGLCEKAEEVFEQMQQAGHEPDVYAYNALMEAYSR 374
Query: 144 GGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDE-------- 195
G + A IF MQ G P +Y I++ + A +EAE F +L +
Sbjct: 375 AGFPQGASEIFSLMQHMGCEPDRASYNILVDAYGRAGLHREAEATFESLKQQGMAPTMKS 434
Query: 196 ------------------------EKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMA 231
KS L+PD + M++ Y +AG + +L A M
Sbjct: 435 HMLLLSAHARSGNVGRCEQVMAQLHKSGLRPDTFALNAMLHAYARAGRLDDMERLLAAMD 494
Query: 232 ERG---VQQSTVTYNS------LMSFETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYG 282
G V V N+ L E ++ + + + ++ G+ DVVS+ + Y
Sbjct: 495 LAGSADVGSHNVAVNAYARAGYLGRMEAAFEGIRR--RKGKKGGIDADVVSWTSRMGGYA 552
Query: 283 KARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRD 335
+ + + L +FEEM+DAG P +L+ A + V+Q + + M ++
Sbjct: 553 RKKEYGKCLEIFEEMVDAGCYPDAGTAKVLMAACSDERQVEQVAAIVRSMHKE 605
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 108/226 (47%)
Query: 264 RAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVD 323
R+ +PD++ Y LLI+AYG+ R+ +A +++ +L+A PT Y +LL A+ + +
Sbjct: 180 RSSFRPDIICYNLLIDAYGRKRQLNKAESIYAAVLEAQCVPTEDTYALLLRAYCNARSLH 239
Query: 324 QARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLI 383
+A V M+ P Y L + A A + ++R+K++ N TY +I
Sbjct: 240 RAEGVISEMQEHGIPPSATVYNAYLDGLLKARCTVKAVEVYQRMKKERCRTNTETYTLMI 299
Query: 384 KGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFP 443
Y K M+I+++M+ G K N +T +++A+ + + A +++M+ G
Sbjct: 300 NVYGKSKQPMSAMKIFNEMQSIGCKANICTYTALVNAFAREGLCEKAEEVFEQMQQAGHE 359
Query: 444 PDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGINGLSISVD 489
PD A N L+ A A+E+ H EP +I VD
Sbjct: 360 PDVYAYNALMEAYSRAGFPQGASEIFSLMQHMGCEPDRASYNILVD 405
>gi|218190151|gb|EEC72578.1| hypothetical protein OsI_06020 [Oryza sativa Indica Group]
Length = 738
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 116/437 (26%), Positives = 203/437 (46%), Gaps = 38/437 (8%)
Query: 61 DLVLGTLVRLKQLKKWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLS 120
D ++ V+ + KKW+++ V EW+ +S + + + + +LI +YGK+ NKAE +
Sbjct: 283 DDLVNVAVQFRMNKKWDLIIPVCEWILYRSSFRPDIICYNLLIESYGKKRQLNKAESIYM 342
Query: 121 FMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEAN 180
+ + P+ ++ L+ AY G AE + M+ G P+A Y L ++A
Sbjct: 343 ALLEAQCVPTEDTYALLLRAYCNAGSLHRAEGVISEMREHGIPPNATVYNAYLDGLLKAR 402
Query: 181 KFKEAEEVF-------------------------------MTLLDEEKS-PLKPDQKMFH 208
++A EV+ M + +E KS KP+ +
Sbjct: 403 CTEKAVEVYQRMKRERCRANTETFTLMINVYGKAKQPMSSMKVFNEMKSIGCKPNICTYT 462
Query: 209 MMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNY---KEVSKIYDQMQRA 265
++ + + G EKA ++F M + G + YN+LM + + S+I+ MQ
Sbjct: 463 ALVNAFAREGLCEKAEEVFEEMQQAGHEPDVYAYNALMEAYSRAGLPQGASEIFSLMQHM 522
Query: 266 GLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQA 325
G +PD SY +L++AYG+A E+A AVFEE+ G+ PT K++ +LL A A SG +
Sbjct: 523 GCEPDRASYNILVDAYGRAGLHEDAEAVFEELKQRGMSPTMKSHMLLLAAHARSGNATRC 582
Query: 326 RTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKG 385
V + + +PD + ML+AY A ++ E+ +++ G +V TY +
Sbjct: 583 EEVMAQLHKSGLTPDTFALNAMLNAYARAGRLDDMERLLAAMERRGDA-DVGTYNVAVNA 641
Query: 386 YAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPD 445
Y + + +M + + G+ + +T M AY + K++ V +EM G PD
Sbjct: 642 YGRAGYVGRMEAAFAAVAARGLAADVVTWTARMGAYARRKEYGRCVGMVEEMVDAGCYPD 701
Query: 446 QKAKNILLSLAKTADER 462
+L LA +DER
Sbjct: 702 AGTARVL--LAACSDER 716
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 75/315 (23%), Positives = 153/315 (48%), Gaps = 8/315 (2%)
Query: 160 SGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGG 219
S RP + Y ++++ + + + +AE ++M LL+ + P + + +++ Y AG
Sbjct: 312 SSFRPDIICYNLLIESYGKKRQLNKAESIYMALLEAQ---CVPTEDTYALLLRAYCNAGS 368
Query: 220 YEKARKLFALMAERGVQQSTVTYNS----LMSFETNYKEVSKIYDQMQRAGLQPDVVSYA 275
+A + + M E G+ + YN+ L+ K V ++Y +M+R + + ++
Sbjct: 369 LHRAEGVISEMREHGIPPNATVYNAYLDGLLKARCTEKAV-EVYQRMKRERCRANTETFT 427
Query: 276 LLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRD 335
L+IN YGKA++ ++ VF EM G +P Y L++AFA G+ ++A VF+ M++
Sbjct: 428 LMINVYGKAKQPMSSMKVFNEMKSIGCKPNICTYTALVNAFAREGLCEKAEEVFEEMQQA 487
Query: 336 RCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKM 395
PD+ +Y ++ AY A +GA + F ++ G P+ +Y L+ Y + E
Sbjct: 488 GHEPDVYAYNALMEAYSRAGLPQGASEIFSLMQHMGCEPDRASYNILVDAYGRAGLHEDA 547
Query: 396 MEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSL 455
++++++ G+ P ++ A+ ++ + ++ G PD A N +L+
Sbjct: 548 EAVFEELKQRGMSPTMKSHMLLLAAHARSGNATRCEEVMAQLHKSGLTPDTFALNAMLNA 607
Query: 456 AKTADERNEANELLG 470
A ++ LL
Sbjct: 608 YARAGRLDDMERLLA 622
Score = 111 bits (278), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 64/228 (28%), Positives = 112/228 (49%)
Query: 262 MQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGM 321
+ R+ +PD++ Y LLI +YGK R+ +A +++ +L+A PT Y +LL A+ +G
Sbjct: 309 LYRSSFRPDIICYNLLIESYGKKRQLNKAESIYMALLEAQCVPTEDTYALLLRAYCNAGS 368
Query: 322 VDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGT 381
+ +A V MR P+ Y L + A E A + ++R+K++ N T+
Sbjct: 369 LHRAEGVISEMREHGIPPNATVYNAYLDGLLKARCTEKAVEVYQRMKRERCRANTETFTL 428
Query: 382 LIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCG 441
+I Y K M+++++M+ G KPN +T +++A+ + + A ++EM+ G
Sbjct: 429 MINVYGKAKQPMSSMKVFNEMKSIGCKPNICTYTALVNAFAREGLCEKAEEVFEEMQQAG 488
Query: 442 FPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGINGLSISVD 489
PD A N L+ A A+E+ H EP +I VD
Sbjct: 489 HEPDVYAYNALMEAYSRAGLPQGASEIFSLMQHMGCEPDRASYNILVD 536
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 69/278 (24%), Positives = 124/278 (44%), Gaps = 42/278 (15%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + L+ A+ ++G KAE+V M + G+ P V ++ ALMEAY R G + A IF
Sbjct: 457 NICTYTALVNAFAREGLCEKAEEVFEEMQQAGHEPDVYAYNALMEAYSRAGLPQGASEIF 516
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
MQ G P +Y I++ + A ++AE VF L ++ + P K +++ +
Sbjct: 517 SLMQHMGCEPDRASYNILVDAYGRAGLHEDAEAVFEEL---KQRGMSPTMKSHMLLLAAH 573
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETN---YKEVSKIYDQMQRAGLQPDV 271
++G + ++ A + + G+ T N++++ ++ ++ M+R G DV
Sbjct: 574 ARSGNATRCEEVMAQLHKSGLTPDTFALNAMLNAYARAGRLDDMERLLAAMERRG-DADV 632
Query: 272 VSYALLINAYGKA---------------------------------RREE--EALAVFEE 296
+Y + +NAYG+A RR+E + + EE
Sbjct: 633 GTYNVAVNAYGRAGYVGRMEAAFAAVAARGLAADVVTWTARMGAYARRKEYGRCVGMVEE 692
Query: 297 MLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRR 334
M+DAG P +LL A + V+Q + + M +
Sbjct: 693 MVDAGCYPDAGTARVLLAACSDERQVEQVTAIVRSMHK 730
>gi|115450929|ref|NP_001049065.1| Os03g0165100 [Oryza sativa Japonica Group]
gi|113547536|dbj|BAF10979.1| Os03g0165100 [Oryza sativa Japonica Group]
Length = 695
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 96/364 (26%), Positives = 176/364 (48%), Gaps = 6/364 (1%)
Query: 93 DFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEA 152
+ N +++ Y K +F+K + V+S M K+ P VV+H +++A R G + A A
Sbjct: 92 EVNTYTLNIMVHNYCKALEFDKVDAVISEMEKRCVFPDVVTHNVMVDARFRAGDAEAAMA 151
Query: 153 IFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIY 212
+ M S G +P +TY +LK + + +A EVF + D + PD + F ++I
Sbjct: 152 LVDSMVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDD---FGVAPDVRSFTILIG 208
Query: 213 MYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSF---ETNYKEVSKIYDQMQRAGLQP 269
+ + G E+A K++ M RG++ V+++ L+ +M+ GL P
Sbjct: 209 GFCRVGEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMDHAMAYLREMRCFGLVP 268
Query: 270 DVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVF 329
D V Y ++I + +A +AL V +EM+ G P YN LL+ + A +
Sbjct: 269 DGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAEGLL 328
Query: 330 KCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKV 389
MR PD+C++TT++ Y ++ A + F + P+++TY TLI G +
Sbjct: 329 NEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQ 388
Query: 390 NNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAK 449
+L+K +++D M I PN ++ ++D++ + + A + EM + G P+
Sbjct: 389 GDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGILPNIMTY 448
Query: 450 NILL 453
N ++
Sbjct: 449 NSII 452
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 95/357 (26%), Positives = 172/357 (48%), Gaps = 8/357 (2%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
++ + G ++KA +V M+ G AP V S T L+ + R G + A I++ M+ G
Sbjct: 171 VLKGLCRSGMWDKAWEVFKEMDDFGVAPDVRSFTILIGGFCRVGEIEEALKIYKEMRHRG 230
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKS-PLKPDQKMFHMMIYMYKKAGGY 220
+P +++ ++ LF K A M L E + L PD ++ M+I + +AG
Sbjct: 231 IKPDLVSFSCLIGLFARRGKMDHA----MAYLREMRCFGLVPDGVIYTMVIGGFCRAGLM 286
Query: 221 EKARKLFALMAERGVQQSTVTYNSLMSF---ETNYKEVSKIYDQMQRAGLQPDVVSYALL 277
A ++ M G VTYN+L++ E + + ++M+ G+ PD+ ++ L
Sbjct: 287 SDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAEGLLNEMRERGVPPDLCTFTTL 346
Query: 278 INAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRC 337
I+ Y + ++AL +F+ ML+ +RP YN L+D G +D+A ++ M
Sbjct: 347 IHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSREI 406
Query: 338 SPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMME 397
P+ +Y+ ++ ++ +E A F + G +PN++TY ++IKGY + N+ K +
Sbjct: 407 FPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQK 466
Query: 398 IYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLS 454
KM VN + P+ + T++ Y K A ME PD N+L++
Sbjct: 467 FLQKMMVNKVSPDLITYNTLIHGYIKEDKMHDAFKLLNMMEKEKVQPDVVTYNMLIN 523
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 97/394 (24%), Positives = 188/394 (47%), Gaps = 45/394 (11%)
Query: 89 QSWWDFNEMD----------FLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALM 138
++W F EMD F +LI + + G+ +A K+ M +G P +VS + L+
Sbjct: 183 KAWEVFKEMDDFGVAPDVRSFTILIGGFCRVGEIEEALKIYKEMRHRGIKPDLVSFSCLI 242
Query: 139 EAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEV---------- 188
+ R G+ +A A R M+ G P + Y +++ F A +A V
Sbjct: 243 GLFARRGKMDHAMAYLREMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCL 302
Query: 189 -----FMTLLD---EEKSPL--------------KPDQKMFHMMIYMYKKAGGYEKARKL 226
+ TLL+ +E+ L PD F +I+ Y G +KA +L
Sbjct: 303 PDVVTYNTLLNGLCKERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQL 362
Query: 227 FALMAERGVQQSTVTYNSL---MSFETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGK 283
F M + ++ VTYN+L M + + + + ++D M + P+ V+Y++LI+++ +
Sbjct: 363 FDTMLNQRLRPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCE 422
Query: 284 ARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICS 343
+ E+A +EM++ G+ P YN ++ + SG V + + + M ++ SPD+ +
Sbjct: 423 KGQVEDAFGFLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLIT 482
Query: 344 YTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMR 403
Y T++ Y+ M A K ++++ P+V+TY LI G++ N+++ I++KM
Sbjct: 483 YNTLIHGYIKEDKMHDAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEKMC 542
Query: 404 VNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEM 437
GI+P++ + ++++ + + A + EM
Sbjct: 543 AKGIEPDRYTYMSMINGHVTAGNSKEAFQLHDEM 576
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 91/352 (25%), Positives = 161/352 (45%), Gaps = 6/352 (1%)
Query: 143 RGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKP 202
R G A +R + SS + T I++ + +A +F + + V + EK + P
Sbjct: 72 RAGWPHLAADAYRLVFSSNSEVNTYTLNIMVHNYCKALEFDKVDAVISEM---EKRCVFP 128
Query: 203 DQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETN---YKEVSKIY 259
D ++M+ +AG E A L M +G++ VTYNS++ + + +++
Sbjct: 129 DVVTHNVMVDARFRAGDAEAAMALVDSMVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVF 188
Query: 260 DQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAIS 319
+M G+ PDV S+ +LI + + EEAL +++EM G++P +++ L+ FA
Sbjct: 189 KEMDDFGVAPDVRSFTILIGGFCRVGEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFARR 248
Query: 320 GMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITY 379
G +D A + MR PD YT ++ + A M A + + G +P+V+TY
Sbjct: 249 GKMDHAMAYLREMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTY 308
Query: 380 GTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMES 439
TL+ G K L + ++MR G+ P+ FTT++ Y D A+ + M +
Sbjct: 309 NTLLNGLCKERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLN 368
Query: 440 CGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGINGLSISVDEE 491
PD N L+ + ++AN+L + + P SI +D
Sbjct: 369 QRLRPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSH 420
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 74/305 (24%), Positives = 150/305 (49%), Gaps = 6/305 (1%)
Query: 153 IFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIY 212
I + S P P + ++++ + ++ K +EA E F +LD + P+ + ++
Sbjct: 12 IVSSLLGSSPTPQPRVFDLLIRTYTQSRKPREAFEAFRLILDH-RVPIP--AAASNALLA 68
Query: 213 MYKKAGGYEKARKLFALMAERGVQQSTVTYNSLM---SFETNYKEVSKIYDQMQRAGLQP 269
+AG A + L+ + +T T N ++ + +V + +M++ + P
Sbjct: 69 ALSRAGWPHLAADAYRLVFSSNSEVNTYTLNIMVHNYCKALEFDKVDAVISEMEKRCVFP 128
Query: 270 DVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVF 329
DVV++ ++++A +A E A+A+ + M+ G++P YN +L SGM D+A VF
Sbjct: 129 DVVTHNVMVDARFRAGDAEAAMALVDSMVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVF 188
Query: 330 KCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKV 389
K M +PD+ S+T ++ + ++E A K ++ ++ G P+++++ LI +A+
Sbjct: 189 KEMDDFGVAPDVRSFTILIGGFCRVGEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFARR 248
Query: 390 NNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAK 449
++ M +MR G+ P+ I+T ++ + + A+ EM CG PD
Sbjct: 249 GKMDHAMAYLREMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTY 308
Query: 450 NILLS 454
N LL+
Sbjct: 309 NTLLN 313
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 50/221 (22%), Positives = 95/221 (42%), Gaps = 2/221 (0%)
Query: 268 QPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQART 327
QP V + LLI Y ++R+ EA F +LD V A N LL A + +G A
Sbjct: 24 QPRV--FDLLIRTYTQSRKPREAFEAFRLILDHRVPIPAAASNALLAALSRAGWPHLAAD 81
Query: 328 VFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYA 387
++ + + + M+ Y A + + + +++ P+V+T+ ++
Sbjct: 82 AYRLVFSSNSEVNTYTLNIMVHNYCKALEFDKVDAVISEMEKRCVFPDVVTHNVMVDARF 141
Query: 388 KVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQK 447
+ + E M + D M G+KP + +++ ++ +D A +KEM+ G PD +
Sbjct: 142 RAGDAEAAMALVDSMVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFGVAPDVR 201
Query: 448 AKNILLSLAKTADERNEANELLGNFNHPNNEPGINGLSISV 488
+ IL+ E EA ++ H +P + S +
Sbjct: 202 SFTILIGGFCRVGEIEEALKIYKEMRHRGIKPDLVSFSCLI 242
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/140 (22%), Positives = 67/140 (47%), Gaps = 3/140 (2%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N M + +I Y + G+ +K +K L M +P ++++ L+ Y + + +A +
Sbjct: 444 NIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMHDAFKLL 503
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
M+ +P +TY +++ F +EA +F + + ++PD+ + MI +
Sbjct: 504 NMMEKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAKG---IEPDRYTYMSMINGH 560
Query: 215 KKAGGYEKARKLFALMAERG 234
AG ++A +L M +RG
Sbjct: 561 VTAGNSKEAFQLHDEMLQRG 580
Score = 45.8 bits (107), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 46/96 (47%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
LI Y K+ + A K+L+ M K+ P VV++ L+ + G + A IF +M + G
Sbjct: 486 LIHGYIKEDKMHDAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAKG 545
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEK 197
P TY ++ V A KEA ++ +L K
Sbjct: 546 IEPDRYTYMSMINGHVTAGNSKEAFQLHDEMLQRGK 581
>gi|357149641|ref|XP_003575182.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Brachypodium distachyon]
Length = 557
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 100/374 (26%), Positives = 181/374 (48%), Gaps = 6/374 (1%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
LI +G A VL M ++G P VV++T L+EA + YK A + M++ G
Sbjct: 162 LIRGLCGRGRTGNALVVLDDMLRRGCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRAKG 221
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
P +TY +++ + + +A E +L +P+ +++++ A +E
Sbjct: 222 CAPDIITYNVVVNGICQEGRVDDAIEFLKSLPSHG---CEPNTVSYNIVLKGLCTAERWE 278
Query: 222 KARKLFALMAERGVQQSTVTYNSLMSFETNYKEVS---KIYDQMQRAGLQPDVVSYALLI 278
A KL A M+++G + VT+N L+SF V ++ DQ+ + G P+ +SY ++
Sbjct: 279 DAEKLMAEMSQKGYPPNVVTFNMLISFLCRRGLVEPAMEVLDQIPKYGCTPNSLSYNPIL 338
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCS 338
+A+ K ++ + A+A E M+ G P +YN LL A G VD A + ++ C+
Sbjct: 339 HAFCKQKKMDRAMAFVELMVSRGCYPDIVSYNTLLTALCRGGEVDAAVELLHQLKDKGCT 398
Query: 339 PDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEI 398
P + SY T++ A + A + + G P++ITY T+ G + + +E+ +
Sbjct: 399 PVLISYNTVIDGLTKAGKTKEALELLNEMVTKGLQPDIITYSTISSGLCREDRIEEAIRA 458
Query: 399 YDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKT 458
+ K++ GI+PN ++ I+ K ++ +A+ + M S G P++ IL+
Sbjct: 459 FCKVQDMGIRPNTVLYNAILLGLCKRRETHNAIDLFIYMISNGCMPNESTYTILIEGLTY 518
Query: 459 ADERNEANELLGNF 472
EA ELLG
Sbjct: 519 EGLVKEARELLGEL 532
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 98/412 (23%), Positives = 193/412 (46%), Gaps = 15/412 (3%)
Query: 73 LKKWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVV 132
+KK E R+ + + + M + ++ Y G + A ++++ M + P
Sbjct: 101 IKKLCASGRTAEARRVLAACEPDVMAYNAMVAGYCVTGQLDAARRLVADMPME---PDSY 157
Query: 133 SHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTL 192
++ L+ GR NA + M G P +TY I+L+ + + +K+A M L
Sbjct: 158 TYNTLIRGLCGRGRTGNALVVLDDMLRRGCVPDVVTYTILLEATCKRSGYKQA----MKL 213
Query: 193 LDEEKSP-LKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLM---SF 248
LDE ++ PD +++++ + G + A + + G + +TV+YN ++
Sbjct: 214 LDEMRAKGCAPDIITYNVVVNGICQEGRVDDAIEFLKSLPSHGCEPNTVSYNIVLKGLCT 273
Query: 249 ETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKA 308
+++ K+ +M + G P+VV++ +LI+ + E A+ V +++ G P +
Sbjct: 274 AERWEDAEKLMAEMSQKGYPPNVVTFNMLISFLCRRGLVEPAMEVLDQIPKYGCTPNSLS 333
Query: 309 YNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLK 368
YN +L AF +D+A + M C PDI SY T+L+A +++ A + +LK
Sbjct: 334 YNPILHAFCKQKKMDRAMAFVELMVSRGCYPDIVSYNTLLTALCRGGEVDAAVELLHQLK 393
Query: 369 QDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFD 428
G P +I+Y T+I G K ++ +E+ ++M G++P+ ++TI + +
Sbjct: 394 DKGCTPVLISYNTVIDGLTKAGKTKEALELLNEMVTKGLQPDIITYSTISSGLCREDRIE 453
Query: 429 SAVVWYKEMESCGFPPDQKAKN-ILLSLAKTADERNEAN---ELLGNFNHPN 476
A+ + +++ G P+ N ILL L K + N + ++ N PN
Sbjct: 454 EAIRAFCKVQDMGIRPNTVLYNAILLGLCKRRETHNAIDLFIYMISNGCMPN 505
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 103/369 (27%), Positives = 162/369 (43%), Gaps = 18/369 (4%)
Query: 128 APSVVSHTALMEAYGRG-GRYKNAEAIFRRMQS-SGPRPSALT--YQIILKLFVEANKFK 183
+P+ V H A+ RG R + E R ++S SG PSA ++K + +
Sbjct: 52 SPNAVPHRAVSNDRLRGLVRRGDLEEALRLVESMSGLEPSAAPGPCAALIKKLCASGRTA 111
Query: 184 EAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYN 243
EA V + +PD ++ M+ Y G + AR+L A M ++ + TYN
Sbjct: 112 EARRVL--------AACEPDVMAYNAMVAGYCVTGQLDAARRLVADMP---MEPDSYTYN 160
Query: 244 SLMSFETNYKEVSK---IYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDA 300
+L+ + D M R G PDVV+Y +L+ A K ++A+ + +EM
Sbjct: 161 TLIRGLCGRGRTGNALVVLDDMLRRGCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRAK 220
Query: 301 GVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGA 360
G P YN++++ G VD A K + C P+ SY +L A E A
Sbjct: 221 GCAPDIITYNVVVNGICQEGRVDDAIEFLKSLPSHGCEPNTVSYNIVLKGLCTAERWEDA 280
Query: 361 EKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDA 420
EK + Q G+ PNV+T+ LI + +E ME+ D++ G PN + I+ A
Sbjct: 281 EKLMAEMSQKGYPPNVVTFNMLISFLCRRGLVEPAMEVLDQIPKYGCTPNSLSYNPILHA 340
Query: 421 YGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPG 480
+ K K D A+ + + M S G PD + N LL+ E + A ELL P
Sbjct: 341 FCKQKKMDRAMAFVELMVSRGCYPDIVSYNTLLTALCRGGEVDAAVELLHQLKDKGCTPV 400
Query: 481 INGLSISVD 489
+ + +D
Sbjct: 401 LISYNTVID 409
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 77/349 (22%), Positives = 154/349 (44%), Gaps = 41/349 (11%)
Query: 97 MDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRR 156
+ + +L+ A K+ + +A K+L M KG AP ++++ ++ + GR +A +
Sbjct: 192 VTYTILLEATCKRSGYKQAMKLLDEMRAKGCAPDIITYNVVVNGICQEGRVDDAIEFLKS 251
Query: 157 MQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKK 216
+ S G P+ ++Y I+LK A ++++AE+ M + ++ P P+ F+M+I +
Sbjct: 252 LPSHGCEPNTVSYNIVLKGLCTAERWEDAEK-LMAEMSQKGYP--PNVVTFNMLISFLCR 308
Query: 217 AGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSK---IYDQMQRAGLQPDVVS 273
G E A ++ + + G ++++YN ++ K++ + + M G PD+VS
Sbjct: 309 RGLVEPAMEVLDQIPKYGCTPNSLSYNPILHAFCKQKKMDRAMAFVELMVSRGCYPDIVS 368
Query: 274 YALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMR 333
Y L+ A + + A+ + ++ D G P +YN ++D +G +A + M
Sbjct: 369 YNTLLTALCRGGEVDAAVELLHQLKDKGCTPVLISYNTVIDGLTKAGKTKEALELLNEMV 428
Query: 334 RDRCSPDICSYTTMLS-------------AYVNASDM----------------------E 358
PDI +Y+T+ S A+ DM
Sbjct: 429 TKGLQPDIITYSTISSGLCREDRIEEAIRAFCKVQDMGIRPNTVLYNAILLGLCKRRETH 488
Query: 359 GAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGI 407
A F + +G +PN TY LI+G +++ E+ ++ G+
Sbjct: 489 NAIDLFIYMISNGCMPNESTYTILIEGLTYEGLVKEARELLGELCSRGV 537
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 70/300 (23%), Positives = 139/300 (46%), Gaps = 8/300 (2%)
Query: 79 VSEVLEWLR--IQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTA 136
V + +E+L+ + N + + +++ + AEK+++ M++KGY P+VV+
Sbjct: 242 VDDAIEFLKSLPSHGCEPNTVSYNIVLKGLCTAERWEDAEKLMAEMSQKGYPPNVVTFNM 301
Query: 137 LMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEE 196
L+ R G + A + ++ G P++L+Y IL F + K A F+ L+
Sbjct: 302 LISFLCRRGLVEPAMEVLDQIPKYGCTPNSLSYNPILHAFCKQKKMDRAM-AFVELMVSR 360
Query: 197 KSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETN---YK 253
PD ++ ++ + G + A +L + ++G ++YN+++ T K
Sbjct: 361 GC--YPDIVSYNTLLTALCRGGEVDAAVELLHQLKDKGCTPVLISYNTVIDGLTKAGKTK 418
Query: 254 EVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILL 313
E ++ ++M GLQPD+++Y+ + + + R EEA+ F ++ D G+RP YN +L
Sbjct: 419 EALELLNEMVTKGLQPDIITYSTISSGLCREDRIEEAIRAFCKVQDMGIRPNTVLYNAIL 478
Query: 314 DAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFV 373
A +F M + C P+ +YT ++ ++ A + L G V
Sbjct: 479 LGLCKRRETHNAIDLFIYMISNGCMPNESTYTILIEGLTYEGLVKEARELLGELCSRGVV 538
>gi|302792252|ref|XP_002977892.1| hypothetical protein SELMODRAFT_107734 [Selaginella moellendorffii]
gi|300154595|gb|EFJ21230.1| hypothetical protein SELMODRAFT_107734 [Selaginella moellendorffii]
Length = 500
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 119/422 (28%), Positives = 197/422 (46%), Gaps = 13/422 (3%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + + +LI K G ++A +LS M KK P+ V++ +L+ + R A +
Sbjct: 80 NVVTYTVLIDGLCKGGRVDEAVALLSKMRKKC-VPTAVTYNSLISGLCKAERASEAYDLL 138
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
M SG P TY ++ F ++ K +A VF L+ +PD + +I
Sbjct: 139 EEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLV---ARGFRPDVVTYSCLIDGL 195
Query: 215 KKAGGYEKARKLFALMAERG-VQQSTVTYNSLMS-FETNYK--EVSKIYDQMQRAGLQPD 270
K G ++A LF M + G +TVTYNSL+S F K E + ++M G PD
Sbjct: 196 CKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLERMAETGSSPD 255
Query: 271 VVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFK 330
VV+Y L+N + K R ++A + +M G+ P + L+D + A +
Sbjct: 256 VVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGLCRENRLSDAVHILG 315
Query: 331 CMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVN 390
MRR CSP + +Y T+L Y A+ +E A KF L++ PNV+++ +I+G KVN
Sbjct: 316 EMRRKSCSPTVYTYNTILDGYCRANQLEEARKFM--LEEMDCPPNVVSFNIMIRGLCKVN 373
Query: 391 NLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEM-ESCGFPPDQKAK 449
+ ME+ ++ R P+ ++TT++D + K D A Y++M E G P+
Sbjct: 374 RSSEAMELVEEARRRRCNPDVVMYTTVIDGLCREKKVDEACRVYRKMLEEPGCLPNSITY 433
Query: 450 NILLSLAKTADERNEANELLGNFNHPNNEPGINGLSISVDEEDDDDDDDEDDDDNIYHDG 509
+ L++ A + A + PN G L I + + D+D + D++ G
Sbjct: 434 STLITGLCNAGMLDRARGYIEKGCVPN--IGTYNLLIDAFRKANRDEDARELLDDMVQRG 491
Query: 510 DG 511
G
Sbjct: 492 FG 493
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 94/379 (24%), Positives = 174/379 (45%), Gaps = 13/379 (3%)
Query: 98 DFLMLITAYGKQGDFNKAEKVLSFMNK---KGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
DF+ + + E+ L F+ K KG+ P V ++TA++ A R A
Sbjct: 10 DFVTYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHEARKFL 69
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
M + P+ +TY +++ + + EA + LL + + P ++ +I
Sbjct: 70 EEMANRNLTPNVVTYTVLIDGLCKGGRVDEA----VALLSKMRKKCVPTAVTYNSLISGL 125
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYK---EVSKIYDQMQRAGLQPDV 271
KA +A L M G TY +L++ K + ++++Q+ G +PDV
Sbjct: 126 CKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDV 185
Query: 272 VSYALLINAYGKARREEEALAVFEEMLDAG-VRPTHKAYNILLDAFAISGMVDQARTVFK 330
V+Y+ LI+ K R +EA+ +F M+ +G P YN L+ F G +D+A + +
Sbjct: 186 VTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLE 245
Query: 331 CMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVN 390
M SPD+ +YTT+++ + + ++ A ++ + G P+V+T+ +L+ G + N
Sbjct: 246 RMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGLCREN 305
Query: 391 NLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKN 450
L + I +MR P + TI+D Y + + A + E C PP+ + N
Sbjct: 306 RLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRANQLEEARKFMLEEMDC--PPNVVSFN 363
Query: 451 ILLSLAKTADERNEANELL 469
I++ + +EA EL+
Sbjct: 364 IMIRGLCKVNRSSEAMELV 382
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 83/353 (23%), Positives = 154/353 (43%), Gaps = 41/353 (11%)
Query: 132 VSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMT 191
V++T+L++ + R + A +M S G P TY ++ N+ EA +
Sbjct: 12 VTYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHEARKFLEE 71
Query: 192 LLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETN 251
+ + L P+ + ++I K G ++A L + M ++ V + VTYNSL+S
Sbjct: 72 MANRN---LTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRKKCVP-TAVTYNSLISGLCK 127
Query: 252 YKEVSKIYD---QMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKA 308
+ S+ YD +M +G PD+ +Y LI + K+++ ++AL VFE+++ G RP
Sbjct: 128 AERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDVVT 187
Query: 309 YNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLK 368
Y+ L+D G + +A + F R +K
Sbjct: 188 YSCLIDGLCKEGRLKEA----------------------------------IDLFGRMIK 213
Query: 369 QDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFD 428
+PN +TY +LI G+ ++ +++ M + ++M G P+ +TT+M+ + K D
Sbjct: 214 SGSCMPNTVTYNSLISGFCRMGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLD 273
Query: 429 SAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGI 481
A +M G PD L+ + ++A +LG + P +
Sbjct: 274 DAYDLLNQMTRKGLTPDVVTFTSLMDGLCRENRLSDAVHILGEMRRKSCSPTV 326
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 48/201 (23%), Positives = 94/201 (46%), Gaps = 1/201 (0%)
Query: 270 DVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVF 329
D V+Y LI K +R E+AL +M+ G P Y ++ A + + +AR
Sbjct: 10 DFVTYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHEARKFL 69
Query: 330 KCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKV 389
+ M +P++ +YT ++ ++ A ++++ VP +TY +LI G K
Sbjct: 70 EEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRKK-CVPTAVTYNSLISGLCKA 128
Query: 390 NNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAK 449
+ ++ ++M +G P+ +TT++ + K+K D A+ ++++ + GF PD
Sbjct: 129 ERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDVVTY 188
Query: 450 NILLSLAKTADERNEANELLG 470
+ L+ EA +L G
Sbjct: 189 SCLIDGLCKEGRLKEAIDLFG 209
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 63/147 (42%), Gaps = 1/147 (0%)
Query: 335 DRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEK 394
+ CS D +YT+++ +E A F ++ GF P+V TY +I N L +
Sbjct: 5 NSCSADFVTYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHE 64
Query: 395 MMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLS 454
+ ++M + PN +T ++D K D AV +M P +++
Sbjct: 65 ARKFLEEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRKKCVPTAVTYNSLISG 124
Query: 455 LAKTADERNEANELLGNFNHPNNEPGI 481
L K A+ +EA +LL + P I
Sbjct: 125 LCK-AERASEAYDLLEEMVYSGCIPDI 150
>gi|115453829|ref|NP_001050515.1| Os03g0569800 [Oryza sativa Japonica Group]
gi|113548986|dbj|BAF12429.1| Os03g0569800 [Oryza sativa Japonica Group]
Length = 773
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 114/470 (24%), Positives = 213/470 (45%), Gaps = 16/470 (3%)
Query: 9 FMQKRRKVEVFKDAADEAGKKNWRRLMNQIEEVGS---AVAVLRSERTRGQPLPKDLVL- 64
F R +E N ++N I E G AV +LR G D+V
Sbjct: 162 FRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFG--CEADIVSY 219
Query: 65 -GTLVRLKQLKKWNVVSEVL-EWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFM 122
L L K+W V E++ E +R+ N + F LI + G F + +VL+ M
Sbjct: 220 NAVLKGLCMAKRWGDVEELMDEMVRVDC--APNIVTFNTLIGYLCRNGLFERVHEVLAQM 277
Query: 123 NKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKF 182
++ G P + + +++ + G + A I RM S G +P+ + Y +LK A ++
Sbjct: 278 SEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERW 337
Query: 183 KEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTY 242
KEAEE+ + ++ PL D F++++ + + G ++ +L M G +TY
Sbjct: 338 KEAEELLSEMFQKD-CPL--DDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITY 394
Query: 243 NSLMSF---ETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLD 299
++++ E E + M G +P+ VSY +++ A R +A + +M+
Sbjct: 395 TTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQ 454
Query: 300 AGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEG 359
G P +N L++ G+V+QA + K M + CSPD+ SY+T++ A E
Sbjct: 455 QGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEE 514
Query: 360 AEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMD 419
A + + G PN I Y ++ ++ + K+++++D ++ I+ + ++ ++
Sbjct: 515 ALELLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQMFDNIKDTTIRSDAVLYNAVIS 574
Query: 420 AYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELL 469
+ K + D A+ ++ M S G P++ +L+ + EA ELL
Sbjct: 575 SLCKRWETDRAIDFFAYMVSNGCMPNESTYTMLIKGLASEGLAKEAQELL 624
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 95/414 (22%), Positives = 174/414 (42%), Gaps = 43/414 (10%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKN----- 149
N F ++ +G A +VL M+ KG AP + ++EA R G ++N
Sbjct: 110 NAYTFFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVL 169
Query: 150 ------------------------------AEAIFRRMQSSGPRPSALTYQIILKLFVEA 179
A + R++ G ++Y +LK A
Sbjct: 170 EAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMA 229
Query: 180 NKFKEAEEVFMTLLDE-EKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQS 238
++ + EE L+DE + P+ F+ +I + G +E+ ++ A M+E G
Sbjct: 230 KRWGDVEE----LMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPD 285
Query: 239 TVTYNSL---MSFETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFE 295
Y ++ + E + + ++I ++M GL+P+VV Y ++ A R +EA +
Sbjct: 286 IRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLS 345
Query: 296 EMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNAS 355
EM +NIL+D F +G+VD+ + + M C PD+ +YTT+++ +
Sbjct: 346 EMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEG 405
Query: 356 DMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFT 415
++ A + + G PN ++Y ++KG E+ +M G PN F
Sbjct: 406 LIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFN 465
Query: 416 TIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELL 469
T+++ K + A+ K+M G PD + + ++ A + EA ELL
Sbjct: 466 TLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELL 519
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 68/326 (20%), Positives = 135/326 (41%), Gaps = 44/326 (13%)
Query: 131 VVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFM 190
VV++ A++ Y R G+ A + + P+A T+ +++ + +A EV
Sbjct: 79 VVAYNAMVAGYCRAGQLAAARRLAAAVPVP---PNAYTFFPVVRGLCTRGRIADALEVLD 135
Query: 191 TLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSF-- 248
+ + +P+ P M+H+++ ++GG+ + ++ M +G T N +++
Sbjct: 136 EMSFKGCAPIPP---MYHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAIC 192
Query: 249 -ETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHK 307
+ E + ++ G + D+VSY ++ A+R + EE++D VR
Sbjct: 193 EQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDV----EELMDEMVR---- 244
Query: 308 AYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRL 367
VD C+P+I ++ T++ E + ++
Sbjct: 245 --------------VD-------------CAPNIVTFNTLIGYLCRNGLFERVHEVLAQM 277
Query: 368 KQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDF 427
+ G P++ Y T+I G K +LE EI ++M G+KPN + T++ + +
Sbjct: 278 SEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERW 337
Query: 428 DSAVVWYKEMESCGFPPDQKAKNILL 453
A EM P D NIL+
Sbjct: 338 KEAEELLSEMFQKDCPLDDVTFNILV 363
>gi|115466680|ref|NP_001056939.1| Os06g0172000 [Oryza sativa Japonica Group]
gi|55773690|dbj|BAD72273.1| putative PPR2 [Oryza sativa Japonica Group]
gi|113594979|dbj|BAF18853.1| Os06g0172000 [Oryza sativa Japonica Group]
gi|215697063|dbj|BAG91057.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218197679|gb|EEC80106.1| hypothetical protein OsI_21852 [Oryza sativa Indica Group]
gi|222635046|gb|EEE65178.1| hypothetical protein OsJ_20289 [Oryza sativa Japonica Group]
Length = 511
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 109/416 (26%), Positives = 212/416 (50%), Gaps = 20/416 (4%)
Query: 11 QKRRKVEVFKDAADEAGKKNWRRLMNQIEEVGSAVAVLRSER----TRGQPLPKDLVLGT 66
++RRK EV + A R+ ++ I + AVL + TR + LP+ ++
Sbjct: 80 ERRRKEEVNRKIAS-------RKALSVILRREATKAVLDKRKPGKGTR-RLLPRTVLEAL 131
Query: 67 LVRLKQLKKWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKG 126
R+ L+ W+ +V + +R Q W+ ++ LIT GK +A ++ M +G
Sbjct: 132 HERITALR-WDSALKVFDLMRDQVWYRPYVGIYVKLITMLGKCKQPERAHELFQAMVDEG 190
Query: 127 YAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSS-GPRPSALTYQIILKLFVEANKFKEA 185
AP++ S+TAL+ AY R GR+ A ++ +M+++ G RP TY I++K + A F
Sbjct: 191 CAPNLESYTALVSAYSRSGRFDRAFSLLEQMKATPGCRPDVQTYSILIKSCLHAYDF--- 247
Query: 186 EEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNS- 244
E V + D ++ ++P+ ++ +I Y KAG + + M + T NS
Sbjct: 248 ERVKYLMEDMARAGIRPNVVTYNTLIDAYGKAGRFAEMESTLLEMLTENCKPDVWTMNST 307
Query: 245 LMSF--ETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGV 302
L +F + + Y++ Q +G+ P++ +Y +L+++YGKA+ E+ AV E M
Sbjct: 308 LRAFGGSGQIETMESCYEKFQASGISPNIKTYNILLDSYGKAKMYEKMGAVMEYMQKYYY 367
Query: 303 RPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEK 362
T YN+++DAF +G ++Q +F+ M+ +R P+ + +++ AY A D++ +
Sbjct: 368 SWTIVTYNVVIDAFGRAGDLEQMEYIFRLMKSERIKPNCVTLCSLVRAYGRAGDVKKIKT 427
Query: 363 FFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIM 418
R ++ +++ + L+ + +V L +M ++ D M++ KP++ TT++
Sbjct: 428 VLRIVENSDITLDIVFFNCLVDAFGRVGCLAEMWDVLDIMKLQRCKPDKVTCTTMI 483
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 77/318 (24%), Positives = 158/318 (49%), Gaps = 10/318 (3%)
Query: 112 FNKAEKVLSFM-NKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQ 170
++ A KV M ++ Y P V + L+ G+ + + A +F+ M G P+ +Y
Sbjct: 140 WDSALKVFDLMRDQVWYRPYVGIYVKLITMLGKCKQPERAHELFQAMVDEGCAPNLESYT 199
Query: 171 IILKLFVEANKFKEAEEVFMTLLDEEKSP--LKPDQKMFHMMIYMYKKAGGYEKARKLFA 228
++ + + +F A +LL++ K+ +PD + + ++I A +E+ + L
Sbjct: 200 ALVSAYSRSGRFDRA----FSLLEQMKATPGCRPDVQTYSILIKSCLHAYDFERVKYLME 255
Query: 229 LMAERGVQQSTVTYNSLMSF---ETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKAR 285
MA G++ + VTYN+L+ + E+ +M +PDV + + A+G +
Sbjct: 256 DMARAGIRPNVVTYNTLIDAYGKAGRFAEMESTLLEMLTENCKPDVWTMNSTLRAFGGSG 315
Query: 286 REEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYT 345
+ E + +E+ +G+ P K YNILLD++ + M ++ V + M++ S I +Y
Sbjct: 316 QIETMESCYEKFQASGISPNIKTYNILLDSYGKAKMYEKMGAVMEYMQKYYYSWTIVTYN 375
Query: 346 TMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVN 405
++ A+ A D+E E FR +K + PN +T +L++ Y + +++K+ + + +
Sbjct: 376 VVIDAFGRAGDLEQMEYIFRLMKSERIKPNCVTLCSLVRAYGRAGDVKKIKTVLRIVENS 435
Query: 406 GIKPNQTIFTTIMDAYGK 423
I + F ++DA+G+
Sbjct: 436 DITLDIVFFNCLVDAFGR 453
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 71/268 (26%), Positives = 133/268 (49%), Gaps = 7/268 (2%)
Query: 163 RPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEK 222
RP Y ++ + + + + A E+F ++DE +P + + + ++ Y ++G +++
Sbjct: 157 RPYVGIYVKLITMLGKCKQPERAHELFQAMVDEGCAP---NLESYTALVSAYSRSGRFDR 213
Query: 223 ARKLFALM-AERGVQQSTVTYNSLMS---FETNYKEVSKIYDQMQRAGLQPDVVSYALLI 278
A L M A G + TY+ L+ +++ V + + M RAG++P+VV+Y LI
Sbjct: 214 AFSLLEQMKATPGCRPDVQTYSILIKSCLHAYDFERVKYLMEDMARAGIRPNVVTYNTLI 273
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCS 338
+AYGKA R E + EML +P N L AF SG ++ + ++ + S
Sbjct: 274 DAYGKAGRFAEMESTLLEMLTENCKPDVWTMNSTLRAFGGSGQIETMESCYEKFQASGIS 333
Query: 339 PDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEI 398
P+I +Y +L +Y A E +++ + ++TY +I + + +LE+M I
Sbjct: 334 PNIKTYNILLDSYGKAKMYEKMGAVMEYMQKYYYSWTIVTYNVVIDAFGRAGDLEQMEYI 393
Query: 399 YDKMRVNGIKPNQTIFTTIMDAYGKNKD 426
+ M+ IKPN +++ AYG+ D
Sbjct: 394 FRLMKSERIKPNCVTLCSLVRAYGRAGD 421
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 103/199 (51%), Gaps = 2/199 (1%)
Query: 257 KIYDQMQ-RAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDA 315
K++D M+ + +P V Y LI GK ++ E A +F+ M+D G P ++Y L+ A
Sbjct: 145 KVFDLMRDQVWYRPYVGIYVKLITMLGKCKQPERAHELFQAMVDEGCAPNLESYTALVSA 204
Query: 316 FAISGMVDQARTVFKCMRRDR-CSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVP 374
++ SG D+A ++ + M+ C PD+ +Y+ ++ + ++A D E + + + G P
Sbjct: 205 YSRSGRFDRAFSLLEQMKATPGCRPDVQTYSILIKSCLHAYDFERVKYLMEDMARAGIRP 264
Query: 375 NVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWY 434
NV+TY TLI Y K +M +M KP+ + + A+G + ++ Y
Sbjct: 265 NVVTYNTLIDAYGKAGRFAEMESTLLEMLTENCKPDVWTMNSTLRAFGGSGQIETMESCY 324
Query: 435 KEMESCGFPPDQKAKNILL 453
++ ++ G P+ K NILL
Sbjct: 325 EKFQASGISPNIKTYNILL 343
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 89/208 (42%), Gaps = 2/208 (0%)
Query: 284 ARREEEALAVFEEMLD-AGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDIC 342
A R + AL VF+ M D RP Y L+ ++A +F+ M + C+P++
Sbjct: 137 ALRWDSALKVFDLMRDQVWYRPYVGIYVKLITMLGKCKQPERAHELFQAMVDEGCAPNLE 196
Query: 343 SYTTMLSAYVNASDMEGAEKFFRRLKQD-GFVPNVITYGTLIKGYAKVNNLEKMMEIYDK 401
SYT ++SAY + + A ++K G P+V TY LIK + E++ + +
Sbjct: 197 SYTALVSAYSRSGRFDRAFSLLEQMKATPGCRPDVQTYSILIKSCLHAYDFERVKYLMED 256
Query: 402 MRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADE 461
M GI+PN + T++DAYGK F EM + PD N L + +
Sbjct: 257 MARAGIRPNVVTYNTLIDAYGKAGRFAEMESTLLEMLTENCKPDVWTMNSTLRAFGGSGQ 316
Query: 462 RNEANELLGNFNHPNNEPGINGLSISVD 489
F P I +I +D
Sbjct: 317 IETMESCYEKFQASGISPNIKTYNILLD 344
>gi|255561697|ref|XP_002521858.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223538896|gb|EEF40494.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 533
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 93/351 (26%), Positives = 171/351 (48%), Gaps = 6/351 (1%)
Query: 122 MNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANK 181
M + G P+VV++ +++ Y + R A R M G P+ +T+ +I+ +
Sbjct: 9 MERNGCLPNVVTYNTMIDGYCKLKRTDEAFGFLRSMGLKGLEPNLITFNMIINGLCRDGR 68
Query: 182 FKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVT 241
KE EV L++ + PD+ ++ ++ Y K G + +A L A M G+ + VT
Sbjct: 69 LKETSEV---LVEMSRKGYVPDEVTYNTLVNGYCKEGNFHQALVLHAEMVRNGLSPNVVT 125
Query: 242 YNSL---MSFETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEML 298
Y SL M N + +DQM GL P+ +Y +IN + + +EA V EM
Sbjct: 126 YTSLINSMCKAGNLNRAMEFFDQMHVRGLCPNERTYTTIINGFAQQGLLDEAYRVLNEMT 185
Query: 299 DAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDME 358
+G P+ YN L++ + G +++A + + M PD+ SY+T++S + +++
Sbjct: 186 RSGFIPSIVTYNALINGHCVLGRMEEAIGLLQDMVGKGVLPDVVSYSTIISGFARNQELD 245
Query: 359 GAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIM 418
A + + +P+ +TY +LI+G + L + +++ +M + P++ +TT++
Sbjct: 246 RAFQMKVEMIGKSVLPDAVTYSSLIQGLCEQRRLTEACDMFQEMLTIKLPPDEFTYTTLI 305
Query: 419 DAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELL 469
+AY K D + A+ + EM GF PD N+L++ EA LL
Sbjct: 306 NAYCKEGDLNKALHLHDEMIQKGFLPDAVTYNVLINGLNKQARSKEARRLL 356
Score = 135 bits (339), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 111/450 (24%), Positives = 208/450 (46%), Gaps = 28/450 (6%)
Query: 44 AVAVLRSERTRG-QP--LPKDLVLGTLVRLKQLKKWNVVSEVLEWLRIQSWWDFNEMDFL 100
A LRS +G +P + ++++ L R +LK+ SEVL + + + +E+ +
Sbjct: 37 AFGFLRSMGLKGLEPNLITFNMIINGLCRDGRLKE---TSEVLVEMSRKGYVP-DEVTYN 92
Query: 101 MLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSS 160
L+ Y K+G+F++A + + M + G +P+VV++T+L+ + + G A F +M
Sbjct: 93 TLVNGYCKEGNFHQALVLHAEMVRNGLSPNVVTYTSLINSMCKAGNLNRAMEFFDQMHVR 152
Query: 161 GPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGY 220
G P+ TY I+ F + EA V L + +S P ++ +I + G
Sbjct: 153 GLCPNERTYTTIINGFAQQGLLDEAYRV---LNEMTRSGFIPSIVTYNALINGHCVLGRM 209
Query: 221 EKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSKIYD---QMQRAGLQPDVVSYALL 277
E+A L M +GV V+Y++++S +E+ + + +M + PD V+Y+ L
Sbjct: 210 EEAIGLLQDMVGKGVLPDVVSYSTIISGFARNQELDRAFQMKVEMIGKSVLPDAVTYSSL 269
Query: 278 INAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRC 337
I + RR EA +F+EML + P Y L++A+ G +++A + M +
Sbjct: 270 IQGLCEQRRLTEACDMFQEMLTIKLPPDEFTYTTLINAYCKEGDLNKALHLHDEMIQKGF 329
Query: 338 SPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLI-------------- 383
PD +Y +++ + + A + +L D +P+ +TY TLI
Sbjct: 330 LPDAVTYNVLINGLNKQARSKEARRLLLKLFYDDSIPSAVTYNTLIENCCNIEFKSAVAL 389
Query: 384 -KGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGF 442
KG+ +++ ++++ M KPN+ I+ I+ + + + A YKEM F
Sbjct: 390 VKGFCMKGLMDEADQVFESMINKNHKPNEAIYNVIIHGHCRIGNVLKAYKLYKEMVHVDF 449
Query: 443 PPDQKAKNILLSLAKTADERNEANELLGNF 472
P L+ T E NE++G+
Sbjct: 450 VPHTVTVLALVKALFTEGMDGELNEVIGDI 479
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 97/387 (25%), Positives = 174/387 (44%), Gaps = 23/387 (5%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + F M+I + G + +VL M++KGY P V++ L+ Y + G + A +
Sbjct: 52 NLITFNMIINGLCRDGRLKETSEVLVEMSRKGYVPDEVTYNTLVNGYCKEGNFHQALVLH 111
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
M +G P+ +TY ++ +A A E F + L P+++ + +I +
Sbjct: 112 AEMVRNGLSPNVVTYTSLINSMCKAGNLNRAMEFFDQM---HVRGLCPNERTYTTIINGF 168
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFET---NYKEVSKIYDQMQRAGLQPDV 271
+ G ++A ++ M G S VTYN+L++ +E + M G+ PDV
Sbjct: 169 AQQGLLDEAYRVLNEMTRSGFIPSIVTYNALINGHCVLGRMEEAIGLLQDMVGKGVLPDV 228
Query: 272 VSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKC 331
VSY+ +I+ + + + + A + EM+ V P Y+ L+ + +A +F+
Sbjct: 229 VSYSTIISGFARNQELDRAFQMKVEMIGKSVLPDAVTYSSLIQGLCEQRRLTEACDMFQE 288
Query: 332 MRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNN 391
M + PD +YTT+++AY D+ A + Q GF+P+ +TY LI G K
Sbjct: 289 MLTIKLPPDEFTYTTLINAYCKEGDLNKALHLHDEMIQKGFLPDAVTYNVLINGLNKQAR 348
Query: 392 LEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNI 451
++ + K+ + P+ + T+++ N +F SAV K GF
Sbjct: 349 SKEARRLLLKLFYDDSIPSAVTYNTLIENCC-NIEFKSAVALVK-----GF--------- 393
Query: 452 LLSLAKTADERNEANELLGNFNHPNNE 478
+ DE ++ E + N NH NE
Sbjct: 394 --CMKGLMDEADQVFESMINKNHKPNE 418
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 102/213 (47%)
Query: 257 KIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAF 316
+ + +M+R G P+VV+Y +I+ Y K +R +EA M G+ P +N++++
Sbjct: 4 RFFKEMERNGCLPNVVTYNTMIDGYCKLKRTDEAFGFLRSMGLKGLEPNLITFNMIINGL 63
Query: 317 AISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNV 376
G + + V M R PD +Y T+++ Y + A + ++G PNV
Sbjct: 64 CRDGRLKETSEVLVEMSRKGYVPDEVTYNTLVNGYCKEGNFHQALVLHAEMVRNGLSPNV 123
Query: 377 ITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKE 436
+TY +LI K NL + ME +D+M V G+ PN+ +TTI++ + + D A E
Sbjct: 124 VTYTSLINSMCKAGNLNRAMEFFDQMHVRGLCPNERTYTTIINGFAQQGLLDEAYRVLNE 183
Query: 437 MESCGFPPDQKAKNILLSLAKTADERNEANELL 469
M GF P N L++ EA LL
Sbjct: 184 MTRSGFIPSIVTYNALINGHCVLGRMEEAIGLL 216
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 56/233 (24%), Positives = 114/233 (48%), Gaps = 3/233 (1%)
Query: 225 KLFALMAERGVQQSTVTYNSLMSFETNYKEVSKIYD---QMQRAGLQPDVVSYALLINAY 281
+ F M G + VTYN+++ K + + M GL+P+++++ ++IN
Sbjct: 4 RFFKEMERNGCLPNVVTYNTMIDGYCKLKRTDEAFGFLRSMGLKGLEPNLITFNMIINGL 63
Query: 282 GKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDI 341
+ R +E V EM G P YN L++ + G QA + M R+ SP++
Sbjct: 64 CRDGRLKETSEVLVEMSRKGYVPDEVTYNTLVNGYCKEGNFHQALVLHAEMVRNGLSPNV 123
Query: 342 CSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDK 401
+YT+++++ A ++ A +FF ++ G PN TY T+I G+A+ L++ + ++
Sbjct: 124 VTYTSLINSMCKAGNLNRAMEFFDQMHVRGLCPNERTYTTIINGFAQQGLLDEAYRVLNE 183
Query: 402 MRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLS 454
M +G P+ + +++ + + A+ ++M G PD + + ++S
Sbjct: 184 MTRSGFIPSIVTYNALINGHCVLGRMEEAIGLLQDMVGKGVLPDVVSYSTIIS 236
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 35/165 (21%), Positives = 81/165 (49%)
Query: 290 ALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLS 349
L F+EM G P YN ++D + D+A + M P++ ++ +++
Sbjct: 2 GLRFFKEMERNGCLPNVVTYNTMIDGYCKLKRTDEAFGFLRSMGLKGLEPNLITFNMIIN 61
Query: 350 AYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKP 409
++ + + + G+VP+ +TY TL+ GY K N + + ++ +M NG+ P
Sbjct: 62 GLCRDGRLKETSEVLVEMSRKGYVPDEVTYNTLVNGYCKEGNFHQALVLHAEMVRNGLSP 121
Query: 410 NQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLS 454
N +T+++++ K + + A+ ++ +M G P+++ +++
Sbjct: 122 NVVTYTSLINSMCKAGNLNRAMEFFDQMHVRGLCPNERTYTTIIN 166
>gi|225464410|ref|XP_002269194.1| PREDICTED: pentatricopeptide repeat-containing protein At5g04810,
chloroplastic [Vitis vinifera]
Length = 929
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 107/413 (25%), Positives = 193/413 (46%), Gaps = 40/413 (9%)
Query: 76 WNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHT 135
W V + E ++ S +F +++T Y ++GD + A M +G P+ +T
Sbjct: 274 WQAVVQAFERIKKPS-----RKEFGLMVTYYARRGDMHHARGTFESMRARGIEPTSHVYT 328
Query: 136 ALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEA-------NKFKEAEEV 188
+L+ AY G + A + R+M+ G S +TY I++ F + + FKEA+E
Sbjct: 329 SLIHAYAVGRDMEEALSCVRKMKEEGIEMSLVTYSILVGGFAKIADAEAADHWFKEAKER 388
Query: 189 FMTL-------------------------LDEEKSPLKPDQKMFHMMIYMYKKAGGYEKA 223
TL + E+ + ++H M+ Y G EK
Sbjct: 389 HTTLNAIIYGNIIYAHCQACNMTQAEALVREMEEEGIDAPIDIYHTMMDGYTIIGNEEKC 448
Query: 224 RKLFALMAERGVQQSTVTYNSLMSFETNYKEVSK---IYDQMQRAGLQPDVVSYALLINA 280
+F + E G S ++Y L++ +VSK + M+ AG++ ++ +Y++LIN
Sbjct: 449 LIVFDRLKECGFTPSVISYGCLINLYIKIGKVSKALEVSKMMEVAGIKHNMKTYSMLING 508
Query: 281 YGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPD 340
+ + + A AVFE+++ G++P YN ++ AF G +D+A K M+++R P
Sbjct: 509 FVRLKDWANAFAVFEDVVKDGLKPDVVLYNNIIRAFCGMGNMDRAIRTVKEMQKERHRPT 568
Query: 341 ICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYD 400
++ ++ + + DM A + F ++ G +P V T+ LI G + +EK +EI D
Sbjct: 569 TRTFMPIIHGFARSGDMRRALEIFDMMRWSGCIPTVHTFNALILGLVEKCQMEKAVEILD 628
Query: 401 KMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILL 453
+M + GI PN+ +TTIM Y D A ++ ++++ G D LL
Sbjct: 629 EMSLAGISPNEHTYTTIMHGYASLGDTGKAFEYFTKLKTEGLELDVYTYEALL 681
Score = 145 bits (365), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 119/457 (26%), Positives = 210/457 (45%), Gaps = 31/457 (6%)
Query: 59 PKDLVLGTLV----RLKQLKKWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNK 114
P + G L+ ++ ++ K VS+++E I+ N + MLI + + D+
Sbjct: 462 PSVISYGCLINLYIKIGKVSKALEVSKMMEVAGIK----HNMKTYSMLINGFVRLKDWAN 517
Query: 115 AEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILK 174
A V + K G P VV + ++ A+ G A + MQ RP+ T+ I+
Sbjct: 518 AFAVFEDVVKDGLKPDVVLYNNIIRAFCGMGNMDRAIRTVKEMQKERHRPTTRTFMPIIH 577
Query: 175 LFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERG 234
F + + A E+F + S P F+ +I + EKA ++ M+ G
Sbjct: 578 GFARSGDMRRALEIFDMM---RWSGCIPTVHTFNALILGLVEKCQMEKAVEILDEMSLAG 634
Query: 235 VQQSTVTYNSLMSFETNYKEVSKIYD---QMQRAGLQPDVVSYALLINAYGKARREEEAL 291
+ + TY ++M + + K ++ +++ GL+ DV +Y L+ A K+ R + AL
Sbjct: 635 ISPNEHTYTTIMHGYASLGDTGKAFEYFTKLKTEGLELDVYTYEALLKACCKSGRMQSAL 694
Query: 292 AVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAY 351
AV EM + YNIL+D +A G V +A + + M+++ PDI +YT+ ++A
Sbjct: 695 AVTREMSSQKIPRNTFVYNILIDGWARRGDVWEAAELMQQMKQEGVQPDIHTYTSFINAC 754
Query: 352 VNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQ 411
A DM+ A K + ++ G PN+ TY TLI G+A+ + EK ++ + +M+ G+KP++
Sbjct: 755 CKAGDMQRATKTIQEMEVVGVKPNIKTYTTLIHGWARASLPEKALKCFQEMKSAGLKPDK 814
Query: 412 TIFTTIMDAY------GKNKDFDSAVVWYKEMESCGFPPDQKA----KNILLSLAKTADE 461
++ +M + + + V +EM C D L + +T E
Sbjct: 815 AVYHCLMTSLLSRASVAEEYIYSGVVGICREMIECELTVDMGTAVHWSKCLRKIERTGGE 874
Query: 462 RNEANELLGNFNHPNNEPGINGLSISVDEEDDDDDDD 498
EA L F P N +I V+ +D+ D DD
Sbjct: 875 LTEA--LQKTF-----PPDWNSYNIHVNSDDELDVDD 904
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 44/205 (21%), Positives = 98/205 (47%), Gaps = 4/205 (1%)
Query: 251 NYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYN 310
N++ V + ++++++ P + L++ Y + A FE M G+ PT Y
Sbjct: 273 NWQAVVQAFERIKK----PSRKEFGLMVTYYARRGDMHHARGTFESMRARGIEPTSHVYT 328
Query: 311 ILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQD 370
L+ A+A+ +++A + + M+ + + +Y+ ++ + +D E A+ +F+ K+
Sbjct: 329 SLIHAYAVGRDMEEALSCVRKMKEEGIEMSLVTYSILVGGFAKIADAEAADHWFKEAKER 388
Query: 371 GFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSA 430
N I YG +I + + N+ + + +M GI I+ T+MD Y + +
Sbjct: 389 HTTLNAIIYGNIIYAHCQACNMTQAEALVREMEEEGIDAPIDIYHTMMDGYTIIGNEEKC 448
Query: 431 VVWYKEMESCGFPPDQKAKNILLSL 455
++ + ++ CGF P + L++L
Sbjct: 449 LIVFDRLKECGFTPSVISYGCLINL 473
>gi|296084463|emb|CBI25022.3| unnamed protein product [Vitis vinifera]
Length = 927
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 107/413 (25%), Positives = 193/413 (46%), Gaps = 40/413 (9%)
Query: 76 WNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHT 135
W V + E ++ S +F +++T Y ++GD + A M +G P+ +T
Sbjct: 253 WQAVVQAFERIKKPS-----RKEFGLMVTYYARRGDMHHARGTFESMRARGIEPTSHVYT 307
Query: 136 ALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEA-------NKFKEAEEV 188
+L+ AY G + A + R+M+ G S +TY I++ F + + FKEA+E
Sbjct: 308 SLIHAYAVGRDMEEALSCVRKMKEEGIEMSLVTYSILVGGFAKIADAEAADHWFKEAKER 367
Query: 189 FMTL-------------------------LDEEKSPLKPDQKMFHMMIYMYKKAGGYEKA 223
TL + E+ + ++H M+ Y G EK
Sbjct: 368 HTTLNAIIYGNIIYAHCQACNMTQAEALVREMEEEGIDAPIDIYHTMMDGYTIIGNEEKC 427
Query: 224 RKLFALMAERGVQQSTVTYNSLMSFETNYKEVSK---IYDQMQRAGLQPDVVSYALLINA 280
+F + E G S ++Y L++ +VSK + M+ AG++ ++ +Y++LIN
Sbjct: 428 LIVFDRLKECGFTPSVISYGCLINLYIKIGKVSKALEVSKMMEVAGIKHNMKTYSMLING 487
Query: 281 YGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPD 340
+ + + A AVFE+++ G++P YN ++ AF G +D+A K M+++R P
Sbjct: 488 FVRLKDWANAFAVFEDVVKDGLKPDVVLYNNIIRAFCGMGNMDRAIRTVKEMQKERHRPT 547
Query: 341 ICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYD 400
++ ++ + + DM A + F ++ G +P V T+ LI G + +EK +EI D
Sbjct: 548 TRTFMPIIHGFARSGDMRRALEIFDMMRWSGCIPTVHTFNALILGLVEKCQMEKAVEILD 607
Query: 401 KMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILL 453
+M + GI PN+ +TTIM Y D A ++ ++++ G D LL
Sbjct: 608 EMSLAGISPNEHTYTTIMHGYASLGDTGKAFEYFTKLKTEGLELDVYTYEALL 660
Score = 145 bits (365), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 119/457 (26%), Positives = 210/457 (45%), Gaps = 31/457 (6%)
Query: 59 PKDLVLGTLV----RLKQLKKWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNK 114
P + G L+ ++ ++ K VS+++E I+ N + MLI + + D+
Sbjct: 441 PSVISYGCLINLYIKIGKVSKALEVSKMMEVAGIKH----NMKTYSMLINGFVRLKDWAN 496
Query: 115 AEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILK 174
A V + K G P VV + ++ A+ G A + MQ RP+ T+ I+
Sbjct: 497 AFAVFEDVVKDGLKPDVVLYNNIIRAFCGMGNMDRAIRTVKEMQKERHRPTTRTFMPIIH 556
Query: 175 LFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERG 234
F + + A E+F + S P F+ +I + EKA ++ M+ G
Sbjct: 557 GFARSGDMRRALEIFDMM---RWSGCIPTVHTFNALILGLVEKCQMEKAVEILDEMSLAG 613
Query: 235 VQQSTVTYNSLMSFETNYKEVSKIYD---QMQRAGLQPDVVSYALLINAYGKARREEEAL 291
+ + TY ++M + + K ++ +++ GL+ DV +Y L+ A K+ R + AL
Sbjct: 614 ISPNEHTYTTIMHGYASLGDTGKAFEYFTKLKTEGLELDVYTYEALLKACCKSGRMQSAL 673
Query: 292 AVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAY 351
AV EM + YNIL+D +A G V +A + + M+++ PDI +YT+ ++A
Sbjct: 674 AVTREMSSQKIPRNTFVYNILIDGWARRGDVWEAAELMQQMKQEGVQPDIHTYTSFINAC 733
Query: 352 VNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQ 411
A DM+ A K + ++ G PN+ TY TLI G+A+ + EK ++ + +M+ G+KP++
Sbjct: 734 CKAGDMQRATKTIQEMEVVGVKPNIKTYTTLIHGWARASLPEKALKCFQEMKSAGLKPDK 793
Query: 412 TIFTTIMDAY------GKNKDFDSAVVWYKEMESCGFPPDQKA----KNILLSLAKTADE 461
++ +M + + + V +EM C D L + +T E
Sbjct: 794 AVYHCLMTSLLSRASVAEEYIYSGVVGICREMIECELTVDMGTAVHWSKCLRKIERTGGE 853
Query: 462 RNEANELLGNFNHPNNEPGINGLSISVDEEDDDDDDD 498
EA L F P N +I V+ +D+ D DD
Sbjct: 854 LTEA--LQKTF-----PPDWNSYNIHVNSDDELDVDD 883
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 44/205 (21%), Positives = 98/205 (47%), Gaps = 4/205 (1%)
Query: 251 NYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYN 310
N++ V + ++++++ P + L++ Y + A FE M G+ PT Y
Sbjct: 252 NWQAVVQAFERIKK----PSRKEFGLMVTYYARRGDMHHARGTFESMRARGIEPTSHVYT 307
Query: 311 ILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQD 370
L+ A+A+ +++A + + M+ + + +Y+ ++ + +D E A+ +F+ K+
Sbjct: 308 SLIHAYAVGRDMEEALSCVRKMKEEGIEMSLVTYSILVGGFAKIADAEAADHWFKEAKER 367
Query: 371 GFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSA 430
N I YG +I + + N+ + + +M GI I+ T+MD Y + +
Sbjct: 368 HTTLNAIIYGNIIYAHCQACNMTQAEALVREMEEEGIDAPIDIYHTMMDGYTIIGNEEKC 427
Query: 431 VVWYKEMESCGFPPDQKAKNILLSL 455
++ + ++ CGF P + L++L
Sbjct: 428 LIVFDRLKECGFTPSVISYGCLINL 452
>gi|302757525|ref|XP_002962186.1| hypothetical protein SELMODRAFT_76934 [Selaginella moellendorffii]
gi|300170845|gb|EFJ37446.1| hypothetical protein SELMODRAFT_76934 [Selaginella moellendorffii]
Length = 855
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 100/383 (26%), Positives = 181/383 (47%), Gaps = 9/383 (2%)
Query: 89 QSWWD--FNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGR 146
++++D + + + +I ++A ++ + G +P+VV++TA+++ + GR
Sbjct: 354 KAFFDEALDVISYTTVIKGLADSKRIDEACELFEKLKTAGCSPNVVAYTAVIDGLLKAGR 413
Query: 147 YKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKM 206
++ F M S P+ TY +++ +A +A +VF ++ + PD
Sbjct: 414 IEDGLKNFEDMSGSSCVPTRTTYTVVIDGLCKAQMLPDACKVFEQMV---QKGCVPDTIT 470
Query: 207 FHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNY---KEVSKIYDQMQ 263
+ +I + KA ++ARKL +M +G + + VTY S++ E ++ QM+
Sbjct: 471 YTTLIDGFSKASKMDEARKLLDVMLTKGPEPTAVTYGSIVHGFCKLDMINEAKEVIAQMR 530
Query: 264 RAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVD 323
G +P + + L++ Y R EEA V EM G P Y L+D +G V
Sbjct: 531 ERGCEPGLFIFTSLLSYYLSKGRAEEAYQVLTEMTARGCAPDVILYTSLIDLLFSTGRVP 590
Query: 324 QARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLI 383
+AR VF M C+PD +Y T++ + ++E A + + + G P+ Y +L+
Sbjct: 591 EARHVFDSMIEKGCAPDALTYGTIIQNFSKIGNVEAAGEILELMAKSGVGPDCFAYNSLM 650
Query: 384 KGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEM-ESCGF 442
GY K+ +++ +YD+M +GIKPN F +M K+ D A +KEM E
Sbjct: 651 DGYVKLERVDQAFGVYDRMVASGIKPNAVTFNVLMHGLFKDGKTDRAFSLFKEMLEKDEV 710
Query: 443 PPDQKAKNILLSLAKTADERNEA 465
PP + IL+ A +EA
Sbjct: 711 PPTLVSYTILIDGLGKAGRVSEA 733
Score = 148 bits (374), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 101/383 (26%), Positives = 178/383 (46%), Gaps = 16/383 (4%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
LI A K G ++A ++ + K A S V++ +LM+ Y + GR + + +M
Sbjct: 235 LIFALCKAGKVDEANEIYQTVVAKKVATSRVAYNSLMDGYCKLGRVDDGLKLLLQMVECD 294
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
P TY I++ F AN+ +A E+F L KP+ + +I A E
Sbjct: 295 NFPDIQTYNILVAGFSRANRLDDALELFKLL---SSYGCKPNAATYTTIIQGLYDAQRME 351
Query: 222 KARKLF--ALMAERGVQQSTVTYNSLMSFETNYK---EVSKIYDQMQRAGLQPDVVSYAL 276
+A+ F AL ++Y +++ + K E +++++++ AG P+VV+Y
Sbjct: 352 EAKAFFDEAL--------DVISYTTVIKGLADSKRIDEACELFEKLKTAGCSPNVVAYTA 403
Query: 277 LINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDR 336
+I+ KA R E+ L FE+M + PT Y +++D + M+ A VF+ M +
Sbjct: 404 VIDGLLKAGRIEDGLKNFEDMSGSSCVPTRTTYTVVIDGLCKAQMLPDACKVFEQMVQKG 463
Query: 337 CSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMM 396
C PD +YTT++ + AS M+ A K + G P +TYG+++ G+ K++ + +
Sbjct: 464 CVPDTITYTTLIDGFSKASKMDEARKLLDVMLTKGPEPTAVTYGSIVHGFCKLDMINEAK 523
Query: 397 EIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLA 456
E+ +MR G +P IFT+++ Y + A EM + G PD L+ L
Sbjct: 524 EVIAQMRERGCEPGLFIFTSLLSYYLSKGRAEEAYQVLTEMTARGCAPDVILYTSLIDLL 583
Query: 457 KTADERNEANELLGNFNHPNNEP 479
+ EA + + P
Sbjct: 584 FSTGRVPEARHVFDSMIEKGCAP 606
Score = 138 bits (347), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 95/381 (24%), Positives = 174/381 (45%), Gaps = 12/381 (3%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
+I Y K GD + K+L M G P ++ L++ + GR A +F RM+ SG
Sbjct: 130 VIHGYCKAGDLDTGFKILEEMLAAGCIPDAAAYFVLIDPLCKLGRVDEAYELFERMRKSG 189
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
+T+ +++ K EA E++ +++ P Q +I+ KAG +
Sbjct: 190 CLGDYVTFMTLIEALSNHGKLDEACELYREMIERGYEPYLEVQ---DSLIFALCKAGKVD 246
Query: 222 KARKLFALMAERGVQQSTVTYNSLMSFETNYKEVS---KIYDQMQRAGLQPDVVSYALLI 278
+A +++ + + V S V YNSLM V K+ QM PD+ +Y +L+
Sbjct: 247 EANEIYQTVVAKKVATSRVAYNSLMDGYCKLGRVDDGLKLLLQMVECDNFPDIQTYNILV 306
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCS 338
+ +A R ++AL +F+ + G +P Y ++ + +++A+ F D +
Sbjct: 307 AGFSRANRLDDALELFKLLSSYGCKPNAATYTTIIQGLYDAQRMEEAKAFF-----DE-A 360
Query: 339 PDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEI 398
D+ SYTT++ ++ ++ A + F +LK G PNV+ Y +I G K +E ++
Sbjct: 361 LDVISYTTVIKGLADSKRIDEACELFEKLKTAGCSPNVVAYTAVIDGLLKAGRIEDGLKN 420
Query: 399 YDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKT 458
++ M + P +T +T ++D K + A +++M G PD L+
Sbjct: 421 FEDMSGSSCVPTRTTYTVVIDGLCKAQMLPDACKVFEQMVQKGCVPDTITYTTLIDGFSK 480
Query: 459 ADERNEANELLGNFNHPNNEP 479
A + +EA +LL EP
Sbjct: 481 ASKMDEARKLLDVMLTKGPEP 501
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 93/339 (27%), Positives = 175/339 (51%), Gaps = 10/339 (2%)
Query: 53 TRGQPLPKDLVLGTLVR-LKQLKKWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGD 111
T+G P P + G++V +L N EV+ +R + + F L++ Y +G
Sbjct: 496 TKG-PEPTAVTYGSIVHGFCKLDMINEAKEVIAQMR-ERGCEPGLFIFTSLLSYYLSKGR 553
Query: 112 FNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQI 171
+A +VL+ M +G AP V+ +T+L++ GR A +F M G P ALTY
Sbjct: 554 AEEAYQVLTEMTARGCAPDVILYTSLIDLLFSTGRVPEARHVFDSMIEKGCAPDALTYGT 613
Query: 172 ILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMA 231
I++ F + + A E+ + KS + PD ++ ++ Y K ++A ++ M
Sbjct: 614 IIQNFSKIGNVEAAGEILELM---AKSGVGPDCFAYNSLMDGYVKLERVDQAFGVYDRMV 670
Query: 232 ERGVQQSTVTYNSLMS--FETNY--KEVSKIYDQMQRAGLQPDVVSYALLINAYGKARRE 287
G++ + VT+N LM F+ + S + +++ + P +VSY +LI+ GKA R
Sbjct: 671 ASGIKPNAVTFNVLMHGLFKDGKTDRAFSLFKEMLEKDEVPPTLVSYTILIDGLGKAGRV 730
Query: 288 EEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTM 347
EA + F+EM+D G+ P Y L+ + A +G + +A+ + + M + +PD+ +Y+ +
Sbjct: 731 SEAFSQFQEMIDRGIIPECHTYTSLIYSLAKAGRIPEAKKLVEDMVKLGVNPDVQAYSAL 790
Query: 348 LSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGY 386
++ +++S ++ A F+ + + G PN +TY L +G+
Sbjct: 791 ITGLIDSSMVDTAWDVFQEMMKRGCAPNEVTYKVLRRGF 829
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 84/369 (22%), Positives = 172/369 (46%), Gaps = 7/369 (1%)
Query: 88 IQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRY 147
+Q + + + LI + K ++A K+L M KG P+ V++ +++ + +
Sbjct: 460 VQKGCVPDTITYTTLIDGFSKASKMDEARKLLDVMLTKGPEPTAVTYGSIVHGFCKLDMI 519
Query: 148 KNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMF 207
A+ + +M+ G P + +L ++ + AEE + L + PD ++
Sbjct: 520 NEAKEVIAQMRERGCEPGLFIFTSLLSYYLSKGR---AEEAYQVLTEMTARGCAPDVILY 576
Query: 208 HMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLM---SFETNYKEVSKIYDQMQR 264
+I + G +AR +F M E+G +TY +++ S N + +I + M +
Sbjct: 577 TSLIDLLFSTGRVPEARHVFDSMIEKGCAPDALTYGTIIQNFSKIGNVEAAGEILELMAK 636
Query: 265 AGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQ 324
+G+ PD +Y L++ Y K R ++A V++ M+ +G++P +N+L+ G D+
Sbjct: 637 SGVGPDCFAYNSLMDGYVKLERVDQAFGVYDRMVASGIKPNAVTFNVLMHGLFKDGKTDR 696
Query: 325 ARTVFKCM-RRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLI 383
A ++FK M +D P + SYT ++ A + A F+ + G +P TY +LI
Sbjct: 697 AFSLFKEMLEKDEVPPTLVSYTILIDGLGKAGRVSEAFSQFQEMIDRGIIPECHTYTSLI 756
Query: 384 KGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFP 443
AK + + ++ + M G+ P+ ++ ++ + D+A ++EM G
Sbjct: 757 YSLAKAGRIPEAKKLVEDMVKLGVNPDVQAYSALITGLIDSSMVDTAWDVFQEMMKRGCA 816
Query: 444 PDQKAKNIL 452
P++ +L
Sbjct: 817 PNEVTYKVL 825
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 91/415 (21%), Positives = 189/415 (45%), Gaps = 13/415 (3%)
Query: 70 LKQLKKWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAP 129
L +L + + E+ E +R +S + + F+ LI A G ++A ++ M ++GY P
Sbjct: 169 LCKLGRVDEAYELFERMR-KSGCLGDYVTFMTLIEALSNHGKLDEACELYREMIERGYEP 227
Query: 130 SVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVF 189
+ +L+ A + G+ A I++ + + S + Y ++ + + + + ++
Sbjct: 228 YLEVQDSLIFALCKAGKVDEANEIYQTVVAKKVATSRVAYNSLMDGYCKLGRVDDGLKLL 287
Query: 190 MTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSF- 248
+ +++ + P D + +++++ + +A + A +LF L++ G + + TY +++
Sbjct: 288 LQMVECDNFP---DIQTYNILVAGFSRANRLDDALELFKLLSSYGCKPNAATYTTIIQGL 344
Query: 249 --ETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTH 306
+E +D+ DV+SY +I ++R +EA +FE++ AG P
Sbjct: 345 YDAQRMEEAKAFFDEAL------DVISYTTVIKGLADSKRIDEACELFEKLKTAGCSPNV 398
Query: 307 KAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRR 366
AY ++D +G ++ F+ M C P +YT ++ A + A K F +
Sbjct: 399 VAYTAVIDGLLKAGRIEDGLKNFEDMSGSSCVPTRTTYTVVIDGLCKAQMLPDACKVFEQ 458
Query: 367 LKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKD 426
+ Q G VP+ ITY TLI G++K + +++ ++ D M G +P + +I+ + K
Sbjct: 459 MVQKGCVPDTITYTTLIDGFSKASKMDEARKLLDVMLTKGPEPTAVTYGSIVHGFCKLDM 518
Query: 427 FDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGI 481
+ A +M G P LLS + EA ++L P +
Sbjct: 519 INEAKEVIAQMRERGCEPGLFIFTSLLSYYLSKGRAEEAYQVLTEMTARGCAPDV 573
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 86/366 (23%), Positives = 155/366 (42%), Gaps = 36/366 (9%)
Query: 114 KAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIIL 173
+A L M+ G P VV+ ++ + + A +F M S G P+ ++Y ++
Sbjct: 3 EALDCLKEMHTTGLMPDVVNCNIVLNGLCKARKIDKAIELFLEMPSMGCEPTIVSYNTVI 62
Query: 174 KLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAER 233
+K EA + F +++D + +PD F +I+ + KAG + L +R
Sbjct: 63 SGLASIDKMDEAYKFFNSMID---NGCEPDVIAFTTLIHGFCKAGQPQVGHMLLNQALKR 119
Query: 234 GVQQSTVTYNSLMSFETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAV 293
+PDV Y +I+ Y KA + +
Sbjct: 120 ---------------------------------FRPDVFLYTSVIHGYCKAGDLDTGFKI 146
Query: 294 FEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVN 353
EEML AG P AY +L+D G VD+A +F+ MR+ C D ++ T++ A N
Sbjct: 147 LEEMLAAGCIPDAAAYFVLIDPLCKLGRVDEAYELFERMRKSGCLGDYVTFMTLIEALSN 206
Query: 354 ASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTI 413
++ A + +R + + G+ P + +LI K +++ EIY + + ++
Sbjct: 207 HGKLDEACELYREMIERGYEPYLEVQDSLIFALCKAGKVDEANEIYQTVVAKKVATSRVA 266
Query: 414 FTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFN 473
+ ++MD Y K D + +M C PD + NIL++ A+ ++A EL +
Sbjct: 267 YNSLMDGYCKLGRVDDGLKLLLQMVECDNFPDIQTYNILVAGFSRANRLDDALELFKLLS 326
Query: 474 HPNNEP 479
+P
Sbjct: 327 SYGCKP 332
Score = 108 bits (271), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 71/339 (20%), Positives = 152/339 (44%), Gaps = 7/339 (2%)
Query: 101 MLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSS 160
+++ K +KA ++ M G P++VS+ ++ + A F M +
Sbjct: 25 IVLNGLCKARKIDKAIELFLEMPSMGCEPTIVSYNTVISGLASIDKMDEAYKFFNSMIDN 84
Query: 161 GPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGY 220
G P + + ++ F +A + +V LL++ +PD ++ +I+ Y KAG
Sbjct: 85 GCEPDVIAFTTLIHGFCKAGQ----PQVGHMLLNQALKRFRPDVFLYTSVIHGYCKAGDL 140
Query: 221 EKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSKIYD---QMQRAGLQPDVVSYALL 277
+ K+ M G Y L+ V + Y+ +M+++G D V++ L
Sbjct: 141 DTGFKILEEMLAAGCIPDAAAYFVLIDPLCKLGRVDEAYELFERMRKSGCLGDYVTFMTL 200
Query: 278 INAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRC 337
I A + +EA ++ EM++ G P + + L+ A +G VD+A +++ + +
Sbjct: 201 IEALSNHGKLDEACELYREMIERGYEPYLEVQDSLIFALCKAGKVDEANEIYQTVVAKKV 260
Query: 338 SPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMME 397
+ +Y +++ Y ++ K ++ + P++ TY L+ G+++ N L+ +E
Sbjct: 261 ATSRVAYNSLMDGYCKLGRVDDGLKLLLQMVECDNFPDIQTYNILVAGFSRANRLDDALE 320
Query: 398 IYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKE 436
++ + G KPN +TTI+ + + A ++ E
Sbjct: 321 LFKLLSSYGCKPNAATYTTIIQGLYDAQRMEEAKAFFDE 359
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 108/222 (48%), Gaps = 5/222 (2%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
+I + K G+ A ++L M K G P ++ +LM+ Y + R A ++ RM +SG
Sbjct: 614 IIQNFSKIGNVEAAGEILELMAKSGVGPDCFAYNSLMDGYVKLERVDQAFGVYDRMVASG 673
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
+P+A+T+ +++ + K A +F +L++++ P P + ++I KAG
Sbjct: 674 IKPNAVTFNVLMHGLFKDGKTDRAFSLFKEMLEKDEVP--PTLVSYTILIDGLGKAGRVS 731
Query: 222 KARKLFALMAERGVQQSTVTYNSL---MSFETNYKEVSKIYDQMQRAGLQPDVVSYALLI 278
+A F M +RG+ TY SL ++ E K+ + M + G+ PDV +Y+ LI
Sbjct: 732 EAFSQFQEMIDRGIIPECHTYTSLIYSLAKAGRIPEAKKLVEDMVKLGVNPDVQAYSALI 791
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISG 320
+ + A VF+EM+ G P Y +L F +G
Sbjct: 792 TGLIDSSMVDTAWDVFQEMMKRGCAPNEVTYKVLRRGFRAAG 833
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/182 (29%), Positives = 87/182 (47%), Gaps = 1/182 (0%)
Query: 288 EEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTM 347
EEAL +EM G+ P NI+L+ + +D+A +F M C P I SY T+
Sbjct: 2 EEALDCLKEMHTTGLMPDVVNCNIVLNGLCKARKIDKAIELFLEMPSMGCEPTIVSYNTV 61
Query: 348 LSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGI 407
+S + M+ A KFF + +G P+VI + TLI G+ K ++ + +
Sbjct: 62 ISGLASIDKMDEAYKFFNSMIDNGCEPDVIAFTTLIHGFCKAGQ-PQVGHMLLNQALKRF 120
Query: 408 KPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANE 467
+P+ ++T+++ Y K D D+ +EM + G PD A +L+ +EA E
Sbjct: 121 RPDVFLYTSVIHGYCKAGDLDTGFKILEEMLAAGCIPDAAAYFVLIDPLCKLGRVDEAYE 180
Query: 468 LL 469
L
Sbjct: 181 LF 182
Score = 38.9 bits (89), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 43/87 (49%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
LI + K G +A+K++ M K G P V +++AL+ A +F+ M G
Sbjct: 755 LIYSLAKAGRIPEAKKLVEDMVKLGVNPDVQAYSALITGLIDSSMVDTAWDVFQEMMKRG 814
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEV 188
P+ +TY+++ + F A + + E V
Sbjct: 815 CAPNEVTYKVLRRGFRAAGRALDLEAV 841
>gi|302806549|ref|XP_002985024.1| hypothetical protein SELMODRAFT_121499 [Selaginella moellendorffii]
gi|300147234|gb|EFJ13899.1| hypothetical protein SELMODRAFT_121499 [Selaginella moellendorffii]
Length = 570
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 101/361 (27%), Positives = 173/361 (47%), Gaps = 7/361 (1%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
L+ K G +A +L + G P VV++T+L++ G+ R A +F+ M G
Sbjct: 206 LLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMALRG 265
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
+ Y +++ ++A K +A V+ T+ + PD MI KAG
Sbjct: 266 LVLDTVCYTALIRGLLQAGKIPQASSVYKTMTSQG---CVPDVVTLSTMIDGLCKAGRIG 322
Query: 222 KARKLFALMAERGVQQSTVTYNSLMSFETNYKEVS---KIYDQMQRAGLQPDVVSYALLI 278
A ++F M RG+ + V Y++L+ +++ ++ QM++A PD ++Y +LI
Sbjct: 323 AAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILI 382
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCS 338
+ K+ E A A F+EML+AG +P YNIL+ F +G D A VF M CS
Sbjct: 383 DGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILVSGFCKAGNTDAACGVFDDMSSSHCS 442
Query: 339 PDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEI 398
P++ +Y T++S + A +F+ +K+ G P+ Y +L+ G K LE +
Sbjct: 443 PNVVTYGTLISGLCKRRQLTKASLYFQHMKERGCPPDSFVYSSLVDGLCKSGKLEGGCML 502
Query: 399 YDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKT 458
+D+M +G+ +QT I N+ D AV + + G P +I+ +L K+
Sbjct: 503 FDEMERSGVANSQTRTRLIFHLCKANR-VDEAVSLFNAIRKEGMPHPYAYNSIISTLIKS 561
Query: 459 A 459
A
Sbjct: 562 A 562
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 95/371 (25%), Positives = 167/371 (45%), Gaps = 13/371 (3%)
Query: 114 KAEKVLSFMNK---KGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQ 170
K + ++ M K G P++ ++ AL+ + GR + A + R++ +G P +TY
Sbjct: 180 KIQDAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYT 239
Query: 171 IILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALM 230
++ + + EA ++F + L D + +I +AG +A ++ M
Sbjct: 240 SLIDGLGKEKRSFEAYKLFKEM---ALRGLVLDTVCYTALIRGLLQAGKIPQASSVYKTM 296
Query: 231 AERGVQQSTVTYNSLMSFETNYKEVS---KIYDQMQRAGLQPDVVSYALLINAYGKARRE 287
+G VT ++++ + +I+ M+ GL P+ V Y+ LI+ KAR+
Sbjct: 297 TSQGCVPDVVTLSTMIDGLCKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKM 356
Query: 288 EEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTM 347
+ AL + +M A P YNIL+D SG V+ AR F M C PD+ +Y +
Sbjct: 357 DCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNIL 416
Query: 348 LSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGI 407
+S + A + + A F + PNV+TYGTLI G K L K + M+ G
Sbjct: 417 VSGFCKAGNTDAACGVFDDMSSSHCSPNVVTYGTLISGLCKRRQLTKASLYFQHMKERGC 476
Query: 408 KPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANE 467
P+ ++++++D K+ + + + EME G Q ++ L K N +E
Sbjct: 477 PPDSFVYSSLVDGLCKSGKLEGGCMLFDEMERSGVANSQTRTRLIFHLCKA----NRVDE 532
Query: 468 LLGNFNHPNNE 478
+ FN E
Sbjct: 533 AVSLFNAIRKE 543
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 86/344 (25%), Positives = 161/344 (46%), Gaps = 12/344 (3%)
Query: 112 FNKAEKVLSFMNK------KGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPS 165
K+ KVL+ M+ G + ++TA+++ + + ++A A+ ++ ++G P+
Sbjct: 140 LCKSGKVLAAMDHFETTTTNGCTIDIHTYTAIVDWLAKNKKIQDAVALMEKITANGCTPT 199
Query: 166 ALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARK 225
TY +L + + +EA ++ ++D + PD + +I K +A K
Sbjct: 200 IATYNALLNGLCKMGRLEEAIDLLRKIVDNGCT---PDVVTYTSLIDGLGKEKRSFEAYK 256
Query: 226 LFALMAERGVQQSTVTYNSLMSF---ETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYG 282
LF MA RG+ TV Y +L+ + S +Y M G PDVV+ + +I+
Sbjct: 257 LFKEMALRGLVLDTVCYTALIRGLLQAGKIPQASSVYKTMTSQGCVPDVVTLSTMIDGLC 316
Query: 283 KARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDIC 342
KA R A+ +F+ M G+ P Y+ L+ + +D A + M++ C+PD
Sbjct: 317 KAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTI 376
Query: 343 SYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKM 402
+Y ++ + D+E A FF + + G P+V TY L+ G+ K N + ++D M
Sbjct: 377 TYNILIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILVSGFCKAGNTDAACGVFDDM 436
Query: 403 RVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQ 446
+ PN + T++ K + A ++++ M+ G PPD
Sbjct: 437 SSSHCSPNVVTYGTLISGLCKRRQLTKASLYFQHMKERGCPPDS 480
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 81/304 (26%), Positives = 139/304 (45%), Gaps = 13/304 (4%)
Query: 94 FNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAI 153
+ + + LI + G +A V M +G P VV+ + +++ + GR A I
Sbjct: 268 LDTVCYTALIRGLLQAGKIPQASSVYKTMTSQGCVPDVVTLSTMIDGLCKAGRIGAAVRI 327
Query: 154 FRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYM 213
F+ M++ G P+ + Y ++ +A K A E+ L +K+ PD ++++I
Sbjct: 328 FKSMEARGLAPNEVVYSALIHGLCKARKMDCALEM---LAQMKKAFCTPDTITYNILIDG 384
Query: 214 YKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSF---ETNYKEVSKIYDQMQRAGLQPD 270
K+G E AR F M E G + TYN L+S N ++D M + P+
Sbjct: 385 LCKSGDVEAARAFFDEMLEAGCKPDVYTYNILVSGFCKAGNTDAACGVFDDMSSSHCSPN 444
Query: 271 VVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFK 330
VV+Y LI+ K R+ +A F+ M + G P Y+ L+D SG ++ +F
Sbjct: 445 VVTYGTLISGLCKRRQLTKASLYFQHMKERGCPPDSFVYSSLVDGLCKSGKLEGGCMLFD 504
Query: 331 CMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITY----GTLIKGY 386
M R + + T ++ A+ ++ A F ++++G +P+ Y TLIK
Sbjct: 505 EMERSGVANSQ-TRTRLIFHLCKANRVDEAVSLFNAIRKEG-MPHPYAYNSIISTLIKS- 561
Query: 387 AKVN 390
AKVN
Sbjct: 562 AKVN 565
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 79/365 (21%), Positives = 158/365 (43%), Gaps = 36/365 (9%)
Query: 126 GYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEA 185
G+ SV + AL++ + R R++ A + + ++ P T+ +++ + A +E
Sbjct: 54 GFQHSVHTGNALLDVFARTKRHREAGNLLKNELATTFLPDVETWNVLITGYCLA---REP 110
Query: 186 EEVFMTLLD-EEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNS 244
EE F + + EE + P K +++++ G K+ K+ A M
Sbjct: 111 EEAFAVIREMEEDYGVAPSLKTHNLVLH------GLCKSGKVLAAMDH------------ 152
Query: 245 LMSFETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRP 304
FET G D+ +Y +++ K ++ ++A+A+ E++ G P
Sbjct: 153 ---FETTTTN-----------GCTIDIHTYTAIVDWLAKNKKIQDAVALMEKITANGCTP 198
Query: 305 THKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFF 364
T YN LL+ G +++A + + + + C+PD+ +YT+++ A K F
Sbjct: 199 TIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLF 258
Query: 365 RRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKN 424
+ + G V + + Y LI+G + + + +Y M G P+ +T++D K
Sbjct: 259 KEMALRGLVLDTVCYTALIRGLLQAGKIPQASSVYKTMTSQGCVPDVVTLSTMIDGLCKA 318
Query: 425 KDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGINGL 484
+AV +K ME+ G P++ + L+ A + + A E+L P
Sbjct: 319 GRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITY 378
Query: 485 SISVD 489
+I +D
Sbjct: 379 NILID 383
>gi|147817754|emb|CAN66662.1| hypothetical protein VITISV_031722 [Vitis vinifera]
Length = 1060
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 107/408 (26%), Positives = 181/408 (44%), Gaps = 42/408 (10%)
Query: 89 QSWWDFNEMDFL-------MLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAY 141
++ W + +MD L M++ K+G F+ KV M +G +P+VV++ L++
Sbjct: 144 EALWVYYKMDVLPAMQACNMVLDGLVKKGRFDTMWKVYGDMVARGASPNVVTYGTLIDGC 203
Query: 142 GRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLK 201
R G + A +F M P+ + Y I+++ ++ EAE +F T+ S +
Sbjct: 204 CRQGDFLKAFRLFDEMIEKKIFPTVVIYTILIRGLCGESRISEAESMFRTM---RNSGML 260
Query: 202 PDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSKIYDQ 261
P+ ++ M+ Y K +KA +L Y +
Sbjct: 261 PNLYTYNTMMDGYCKIAHVKKALEL--------------------------------YXE 288
Query: 262 MQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGM 321
M GL P+VV++ +LI+ K A +M GV P YN L+D + +G
Sbjct: 289 MLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGN 348
Query: 322 VDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGT 381
+ +A ++ + + PD+ +Y+ ++ ME A+ + +K+ GF+PN +TY T
Sbjct: 349 LSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNT 408
Query: 382 LIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCG 441
LI GY K N+EK +E+ +M GI+PN F+T++D Y K ++A+ Y EM G
Sbjct: 409 LIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKG 468
Query: 442 FPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGINGLSISVD 489
PD A L+ EA L P + LS +D
Sbjct: 469 LLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCLID 516
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 94/340 (27%), Positives = 163/340 (47%), Gaps = 6/340 (1%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + + LI +QGDF KA ++ M +K P+VV +T L+ R AE++F
Sbjct: 192 NVVTYGTLIDGCCRQGDFLKAFRLFDEMIEKKIFPTVVIYTILIRGLCGESRISEAESMF 251
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
R M++SG P+ TY ++ + + K+A E++ +L + L P+ F ++I
Sbjct: 252 RTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALELYXEMLGDG---LLPNVVTFGILIDGL 308
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSLM---SFETNYKEVSKIYDQMQRAGLQPDV 271
K ARK MA GV + YN L+ N E ++ ++++ + PDV
Sbjct: 309 CKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGNLSEALSLHSEIEKHEILPDV 368
Query: 272 VSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKC 331
+Y++LI R EEA + +EM G P YN L+D + G +++A V
Sbjct: 369 FTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQ 428
Query: 332 MRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNN 391
M P+I +++T++ Y A ME A + + G +P+V+ Y LI G+ K N
Sbjct: 429 MTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGN 488
Query: 392 LEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAV 431
++ ++ +M+ G+ PN + ++D K+ A+
Sbjct: 489 TKEAFRLHKEMQEAGLHPNVFTLSCLIDGLCKDGRISDAI 528
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 89/361 (24%), Positives = 166/361 (45%), Gaps = 25/361 (6%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + F +LI K + A K L M G P++ + L++ Y + G A ++
Sbjct: 297 NVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGNLSEALSLH 356
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
++ P TY I++K ++ +EA+ + L + +K P+ ++ +I Y
Sbjct: 357 SEIEKHEILPDVFTYSILIKGLCGVDRMEEADGL---LQEMKKKGFLPNAVTYNTLIDGY 413
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSK------IYDQMQRAGLQ 268
K G EKA ++ + M E+G++ + +T+++L+ Y + K +Y +M GL
Sbjct: 414 CKEGNMEKAIEVCSQMTEKGIEPNIITFSTLID---GYCKAGKMEAAMGLYTEMVIKGLL 470
Query: 269 PDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTV 328
PDVV+Y LI+ + K +EA + +EM +AG+ P + L+D G + A +
Sbjct: 471 PDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCLIDGLCKDGRISDAIKL 530
Query: 329 FKC-------------MRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPN 375
F + R CSP+ YT ++ + A KFF ++ G P+
Sbjct: 531 FLAKTGTDTTGSKTNELDRSLCSPNHVMYTALIQGLCTDGRIFKASKFFSDMRCSGLRPD 590
Query: 376 VITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYK 435
V T +I+G+ + +L +M + + GI PN +++ + Y ++ SA+ +
Sbjct: 591 VFTCIVIIQGHFRAMHLRDVMMLQADILKMGIIPNSSVYRVLAKGYEESGYLKSALSFCG 650
Query: 436 E 436
E
Sbjct: 651 E 651
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 64/294 (21%), Positives = 113/294 (38%), Gaps = 70/294 (23%)
Query: 277 LINAYGKARREEEALAVFEEM--LDAGVRPTHKAYNILLDAFAISGMVDQARTVF----- 329
LI K+RR +VF + L++ + T + +L+ AF+ G+V++A V+
Sbjct: 96 LIQCLQKSRRSRICCSVFNVLSRLESS-KFTPNVFGVLIIAFSEMGLVEEALWVYYKMDV 154
Query: 330 -----KC-------MRRDR---------------CSPDICSYTTMLSAYVNASD------ 356
C +++ R SP++ +Y T++ D
Sbjct: 155 LPAMQACNMVLDGLVKKGRFDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFLKAFR 214
Query: 357 -----------------------------MEGAEKFFRRLKQDGFVPNVITYGTLIKGYA 387
+ AE FR ++ G +PN+ TY T++ GY
Sbjct: 215 LFDEMIEKKIFPTVVIYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYC 274
Query: 388 KVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQK 447
K+ +++K +E+Y +M +G+ PN F ++D K + SA + +M S G P+
Sbjct: 275 KIAHVKKALELYXEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIF 334
Query: 448 AKNILLSLAKTADERNEANELLGNFNHPNNEPGINGLSISVDEEDDDDDDDEDD 501
N L+ A +EA L P + SI + D +E D
Sbjct: 335 VYNCLIDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEAD 388
Score = 46.6 bits (109), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 59/309 (19%), Positives = 122/309 (39%), Gaps = 36/309 (11%)
Query: 201 KPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVS---K 257
+PD + + G + + A + RG+ NSL++ + E+ +
Sbjct: 746 QPDIVTVTVALSACADLGALDMGEWIHAYIRHRGLDTDLCLNNSLINMYSKCGEIGTARR 805
Query: 258 IYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFA 317
++D Q+ DV ++ +I + + EEAL +F EM + R N
Sbjct: 806 LFDGTQKK----DVTTWTSMIVGHALHGQAEEALQLFTEMKETNKRARKNKRN------- 854
Query: 318 ISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQD-GFVPNV 376
G + + + P+ ++ +L A +A +E ++ FR +K+D P +
Sbjct: 855 --GEXESSLVL----------PNDVTFMGVLMACSHAGLVEEGKQHFRSMKEDYSLRPRI 902
Query: 377 ITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYG----KNKDFDSAVV 432
+G ++ + L + E KM V +PN ++ T++ A N + +S +
Sbjct: 903 SHFGCMVDLLCRAGLLTEAYEFILKMPV---RPNAVVWRTLLGACSLQGDSNGNGNSNIK 959
Query: 433 WYKEM--ESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGINGLSISVDE 490
E + P N+++S A + L+ N +PG + + + +D
Sbjct: 960 IXSEARRQLLELEPSHVGDNVIMSNLYAAKGMWDKKMLVRNQIKQRRDPGCSSIEVGIDI 1019
Query: 491 EDDDDDDDE 499
++ DD+
Sbjct: 1020 KEFVAADDQ 1028
>gi|302795346|ref|XP_002979436.1| hypothetical protein SELMODRAFT_177686 [Selaginella moellendorffii]
gi|300152684|gb|EFJ19325.1| hypothetical protein SELMODRAFT_177686 [Selaginella moellendorffii]
Length = 500
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 119/422 (28%), Positives = 197/422 (46%), Gaps = 13/422 (3%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + + +LI K G ++A +LS M KK P+ V++ +L+ + R A +
Sbjct: 80 NVVTYTVLIDGLCKGGRVDEAVALLSKMRKKC-VPTAVTYNSLISGLCKAERASEAYDLL 138
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
M SG P TY ++ F ++ K +A VF L+ +PD + +I
Sbjct: 139 EEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLV---ARGFRPDVVTYSCLIDGL 195
Query: 215 KKAGGYEKARKLFALMAERG-VQQSTVTYNSLMS-FETNYK--EVSKIYDQMQRAGLQPD 270
K G ++A LF M + G +TVTYNSL+S F K E + ++M G PD
Sbjct: 196 CKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLERMAETGSSPD 255
Query: 271 VVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFK 330
VV+Y L+N + K R ++A + +M G+ P + L+D + A +
Sbjct: 256 VVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGLCRENRLSDAVHILG 315
Query: 331 CMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVN 390
MRR CSP + +Y T+L Y A+ +E A KF L++ PNV+++ +I+G KVN
Sbjct: 316 EMRRKSCSPTVYTYNTILDGYCRANQLEEARKFM--LEEMDCPPNVVSFNIMIRGLCKVN 373
Query: 391 NLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEM-ESCGFPPDQKAK 449
+ ME+ ++ R P+ ++TT++D + K D A Y++M E G P+
Sbjct: 374 RSSEAMELVEEARRRRCNPDVVMYTTVIDGLCREKKVDEACRVYRKMLEEPGCLPNSITY 433
Query: 450 NILLSLAKTADERNEANELLGNFNHPNNEPGINGLSISVDEEDDDDDDDEDDDDNIYHDG 509
+ L++ A + A + PN G L I + + D+D + D++ G
Sbjct: 434 STLVTGLCNAGMLDRARGYIEKGCVPN--IGTYNLLIDAFRKANRDEDARELLDDMVQRG 491
Query: 510 DG 511
G
Sbjct: 492 FG 493
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 96/399 (24%), Positives = 179/399 (44%), Gaps = 13/399 (3%)
Query: 98 DFLMLITAYGKQGDFNKAEKVLSFMNK---KGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
DF+ + + E+ L F+ K KG+ P V ++TA++ A R A
Sbjct: 10 DFVTYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHEARKFL 69
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
M + P+ +TY +++ + + EA + LL + + P ++ +I
Sbjct: 70 EEMANRNLTPNVVTYTVLIDGLCKGGRVDEA----VALLSKMRKKCVPTAVTYNSLISGL 125
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYK---EVSKIYDQMQRAGLQPDV 271
KA +A L M G TY +L++ K + ++++Q+ G +PDV
Sbjct: 126 CKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDV 185
Query: 272 VSYALLINAYGKARREEEALAVFEEMLDAG-VRPTHKAYNILLDAFAISGMVDQARTVFK 330
V+Y+ LI+ K R +EA+ +F M+ +G P YN L+ F G +D+A + +
Sbjct: 186 VTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLE 245
Query: 331 CMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVN 390
M SPD+ +YTT+++ + + ++ A ++ + G P+V+T+ +L+ G + N
Sbjct: 246 RMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGLCREN 305
Query: 391 NLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKN 450
L + I +MR P + TI+D Y + + A + E C PP+ + N
Sbjct: 306 RLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRANQLEEARKFMLEEMDC--PPNVVSFN 363
Query: 451 ILLSLAKTADERNEANELLGNFNHPNNEPGINGLSISVD 489
I++ + +EA EL+ P + + +D
Sbjct: 364 IMIRGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTVID 402
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 63/147 (42%), Gaps = 1/147 (0%)
Query: 335 DRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEK 394
+ CS D +YT+++ +E A F ++ GF P+V TY +I N L +
Sbjct: 5 NSCSADFVTYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHE 64
Query: 395 MMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLS 454
+ ++M + PN +T ++D K D AV +M P +++
Sbjct: 65 ARKFLEEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRKKCVPTAVTYNSLISG 124
Query: 455 LAKTADERNEANELLGNFNHPNNEPGI 481
L K A+ +EA +LL + P I
Sbjct: 125 LCK-AERASEAYDLLEEMVYSGCIPDI 150
>gi|79369396|ref|NP_176481.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806495|sp|Q9LQ14.2|PPR96_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g62930, chloroplastic; Flags: Precursor
gi|332195902|gb|AEE34023.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 629
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 111/474 (23%), Positives = 219/474 (46%), Gaps = 45/474 (9%)
Query: 48 LRSERTRGQPLPKDLVLGTLVR-LKQLKKWNVV---SEVLEWLRIQ-SWWDFNEMDFLML 102
L E + +PLP + L+ + ++ K+++V E ++ LRI + +N +L
Sbjct: 67 LFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYN-----IL 121
Query: 103 ITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGP 162
I + ++ A VL M K GY P +V+ ++L+ Y G R A A+ +M
Sbjct: 122 INCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEY 181
Query: 163 RPSALTYQIILKLFVEANKFKEAEEVF-------------------------------MT 191
+P+ +T+ ++ NK EA + ++
Sbjct: 182 QPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALS 241
Query: 192 LLDE-EKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFET 250
LL + EK ++ D ++ +I A LF M +G++ + VTYNSL+
Sbjct: 242 LLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLC 301
Query: 251 NY---KEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHK 307
NY + S++ M + P+VV+++ LI+A+ K + EA +++EM+ + P
Sbjct: 302 NYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIF 361
Query: 308 AYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRL 367
Y+ L++ F + +D+A+ +F+ M C P++ +Y T++ + A +E + FR +
Sbjct: 362 TYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREM 421
Query: 368 KQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDF 427
Q G V N +TY TLI+G + + + +I+ KM +G+ P+ ++ ++D K
Sbjct: 422 SQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKL 481
Query: 428 DSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGI 481
+ A+V ++ ++ PD NI++ A + + +L + + +P +
Sbjct: 482 EKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNV 535
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 95/360 (26%), Positives = 179/360 (49%), Gaps = 6/360 (1%)
Query: 99 FLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQ 158
+ +I A + N A + + M+ KG P+VV++ +L+ GR+ +A + M
Sbjct: 258 YTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMI 317
Query: 159 SSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAG 218
P+ +T+ ++ FV+ K EAE+++ ++ K + PD + +I +
Sbjct: 318 ERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMI---KRSIDPDIFTYSSLINGFCMHD 374
Query: 219 GYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSK---IYDQMQRAGLQPDVVSYA 275
++A+ +F LM + + VTYN+L+ K V + ++ +M + GL + V+Y
Sbjct: 375 RLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYN 434
Query: 276 LLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRD 335
LI +A + A +F++M+ GV P Y+ILLD G +++A VF+ +++
Sbjct: 435 TLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKS 494
Query: 336 RCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKM 395
+ PDI +Y M+ A +E F L G PNVI Y T+I G+ + E+
Sbjct: 495 KMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEA 554
Query: 396 MEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSL 455
++ +M+ +G PN + T++ A ++ D ++ KEM SCGF D ++++++
Sbjct: 555 DALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTISMVINM 614
Score = 149 bits (375), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 91/355 (25%), Positives = 168/355 (47%), Gaps = 6/355 (1%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
++ K+GD + A +L M K VV +T +++A +A +F M + G
Sbjct: 226 VVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKG 285
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
RP+ +TY +++ ++ +A + +++ + + P+ F +I + K G
Sbjct: 286 IRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERK---INPNVVTFSALIDAFVKEGKLV 342
Query: 222 KARKLFALMAERGVQQSTVTYNSLM---SFETNYKEVSKIYDQMQRAGLQPDVVSYALLI 278
+A KL+ M +R + TY+SL+ E +++ M P+VV+Y LI
Sbjct: 343 EAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLI 402
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCS 338
+ KA+R EE + +F EM G+ YN L+ +G D A+ +FK M D
Sbjct: 403 KGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVP 462
Query: 339 PDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEI 398
PDI +Y+ +L +E A F L++ P++ TY +I+G K +E ++
Sbjct: 463 PDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDL 522
Query: 399 YDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILL 453
+ + + G+KPN I+TT++ + + + A ++EM+ G P+ N L+
Sbjct: 523 FCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLI 577
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 93/365 (25%), Positives = 175/365 (47%), Gaps = 43/365 (11%)
Query: 59 PKDLVLGTLVR-LKQLKKWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEK 117
P + +L+R L +W+ S +L + I+ + N + F LI A+ K+G +AEK
Sbjct: 288 PNVVTYNSLIRCLCNYGRWSDASRLLSDM-IERKINPNVVTFSALIDAFVKEGKLVEAEK 346
Query: 118 VLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFV 177
+ M K+ P + ++++L+ + R A+ +F M S P+ +TY ++K F
Sbjct: 347 LYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFC 406
Query: 178 EANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQ 237
+A + +E E LF M++RG+
Sbjct: 407 KAKRVEEGME--------------------------------------LFREMSQRGLVG 428
Query: 238 STVTYNSLMS--FETNYKEVS-KIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVF 294
+TVTYN+L+ F+ +++ KI+ +M G+ PD+++Y++L++ K + E+AL VF
Sbjct: 429 NTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVF 488
Query: 295 EEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNA 354
E + + + P YNI+++ +G V+ +F + P++ YTTM+S +
Sbjct: 489 EYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRK 548
Query: 355 SDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIF 414
E A+ FR +K+DG +PN TY TLI+ + + E+ +MR G + +
Sbjct: 549 GLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTI 608
Query: 415 TTIMD 419
+ +++
Sbjct: 609 SMVIN 613
Score = 101 bits (252), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 79/326 (24%), Positives = 140/326 (42%), Gaps = 10/326 (3%)
Query: 149 NAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKP--DQKM 206
+A +F M S P PS + + +L + NKF + L E L+ D
Sbjct: 63 DAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFD-----LVISLGERMQNLRISYDLYS 117
Query: 207 FHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSK---IYDQMQ 263
++++I + + A + M + G + VT +SL++ + K +S+ + DQM
Sbjct: 118 YNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMF 177
Query: 264 RAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVD 323
QP+ V++ LI+ + EA+A+ + M+ G +P Y +++ G +D
Sbjct: 178 VMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDID 237
Query: 324 QARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLI 383
A ++ K M + + D+ YTT++ A N ++ A F + G PNV+TY +LI
Sbjct: 238 LALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLI 297
Query: 384 KGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFP 443
+ + M I PN F+ ++DA+ K A Y EM
Sbjct: 298 RCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSID 357
Query: 444 PDQKAKNILLSLAKTADERNEANELL 469
PD + L++ D +EA +
Sbjct: 358 PDIFTYSSLINGFCMHDRLDEAKHMF 383
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 60/275 (21%), Positives = 118/275 (42%), Gaps = 13/275 (4%)
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTY--------NSLMSFETNYKEVSKIYDQMQRAG 266
K+ KA LF+L RGV S +Y N L+ + + + ++ +M ++
Sbjct: 21 KRFAQLRKASPLFSL---RGVYFSAASYDYREKLSRNVLLDLKLD--DAVDLFGEMVQSR 75
Query: 267 LQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQAR 326
P +V + L++A K + + +++ E M + + +YNIL++ F + A
Sbjct: 76 PLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNILINCFCRRSQLPLAL 135
Query: 327 TVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGY 386
V M + PDI + +++L+ Y + + A ++ + PN +T+ TLI G
Sbjct: 136 AVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGL 195
Query: 387 AKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQ 446
N + + + D+M G +P+ + T+++ K D D A+ K+ME D
Sbjct: 196 FLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADV 255
Query: 447 KAKNILLSLAKTADERNEANELLGNFNHPNNEPGI 481
++ N+A L ++ P +
Sbjct: 256 VIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNV 290
>gi|302763353|ref|XP_002965098.1| hypothetical protein SELMODRAFT_83321 [Selaginella moellendorffii]
gi|300167331|gb|EFJ33936.1| hypothetical protein SELMODRAFT_83321 [Selaginella moellendorffii]
Length = 600
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 99/373 (26%), Positives = 175/373 (46%), Gaps = 7/373 (1%)
Query: 97 MDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRR 156
+ + +I ++A ++ + G +P+VV++TA+++ + GR ++ F
Sbjct: 109 ISYTTVIKGLADSKRIDEACELFEELKTAGCSPNVVAYTAVIDGLLKAGRIEDGLKNFEE 168
Query: 157 MQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKK 216
M S P+ TY +++ +A +A +VF ++ + PD + +I + K
Sbjct: 169 MSGSSCVPTRTTYTVVIDGLCKAQMLPDACKVFEQMVQKG---CVPDTITYTTLIDGFSK 225
Query: 217 AGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNY---KEVSKIYDQMQRAGLQPDVVS 273
A ++ARKL +M +G + + VTY S++ E ++ QM+ G +P +
Sbjct: 226 ASKMDEARKLLDVMLTKGPEPTAVTYGSIVHGFCKLDMINEAKEVIAQMRERGCEPGLFI 285
Query: 274 YALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMR 333
+ L++ Y R EEA V EM G P Y L+D +G V +AR VF M
Sbjct: 286 FTSLLSYYLSKGRAEEAYQVLTEMTARGCAPDVILYTSLIDLLFSTGRVPEARHVFDSMI 345
Query: 334 RDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLE 393
C+PD +Y T++ + ++E A + + + G P+ Y +L+ GY K+ ++
Sbjct: 346 EKGCAPDALTYGTIIQNFSKIGNVEAAGEILELMAKSGVGPDCFAYNSLMDGYVKLERVD 405
Query: 394 KMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEM-ESCGFPPDQKAKNIL 452
+ +YD+M +GIKPN F +M K+ D A +KEM E PP + IL
Sbjct: 406 QAFGVYDRMVASGIKPNAVTFNVLMHGLFKDGKTDRAFSLFKEMLEKEEVPPTLVSYTIL 465
Query: 453 LSLAKTADERNEA 465
+ A +EA
Sbjct: 466 IDGLGKAGRVSEA 478
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 91/361 (25%), Positives = 167/361 (46%), Gaps = 18/361 (4%)
Query: 126 GYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEA 185
G P++VS+ ++ + A F M +G P + + ++ F +A +
Sbjct: 2 GCEPTIVSYNTVISGLASIDKMDEAYKFFNSMIDNGCEPDVIAFTTLIHGFCKAGQ---- 57
Query: 186 EEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAG----GYEKARKLFALMAERGVQQSTVT 241
+V LL++ +PD ++ +I+ Y KAG GY +A A + ++
Sbjct: 58 PQVGHKLLNQALKRFRPDVFLYTSVIHGYCKAGDLDTGYFRAVTPKASL-------DVIS 110
Query: 242 YNSLMSFETNYK---EVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEML 298
Y +++ + K E +++++++ AG P+VV+Y +I+ KA R E+ L FEEM
Sbjct: 111 YTTVIKGLADSKRIDEACELFEELKTAGCSPNVVAYTAVIDGLLKAGRIEDGLKNFEEMS 170
Query: 299 DAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDME 358
+ PT Y +++D + M+ A VF+ M + C PD +YTT++ + AS M+
Sbjct: 171 GSSCVPTRTTYTVVIDGLCKAQMLPDACKVFEQMVQKGCVPDTITYTTLIDGFSKASKMD 230
Query: 359 GAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIM 418
A K + G P +TYG+++ G+ K++ + + E+ +MR G +P IFT+++
Sbjct: 231 EARKLLDVMLTKGPEPTAVTYGSIVHGFCKLDMINEAKEVIAQMRERGCEPGLFIFTSLL 290
Query: 419 DAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNE 478
Y + A EM + G PD L+ L + EA + +
Sbjct: 291 SYYLSKGRAEEAYQVLTEMTARGCAPDVILYTSLIDLLFSTGRVPEARHVFDSMIEKGCA 350
Query: 479 P 479
P
Sbjct: 351 P 351
Score = 135 bits (339), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 93/339 (27%), Positives = 174/339 (51%), Gaps = 10/339 (2%)
Query: 53 TRGQPLPKDLVLGTLVR-LKQLKKWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGD 111
T+G P P + G++V +L N EV+ +R + + F L++ Y +G
Sbjct: 241 TKG-PEPTAVTYGSIVHGFCKLDMINEAKEVIAQMR-ERGCEPGLFIFTSLLSYYLSKGR 298
Query: 112 FNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQI 171
+A +VL+ M +G AP V+ +T+L++ GR A +F M G P ALTY
Sbjct: 299 AEEAYQVLTEMTARGCAPDVILYTSLIDLLFSTGRVPEARHVFDSMIEKGCAPDALTYGT 358
Query: 172 ILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMA 231
I++ F + + A E+ + KS + PD ++ ++ Y K ++A ++ M
Sbjct: 359 IIQNFSKIGNVEAAGEILELM---AKSGVGPDCFAYNSLMDGYVKLERVDQAFGVYDRMV 415
Query: 232 ERGVQQSTVTYNSLMS--FETNY--KEVSKIYDQMQRAGLQPDVVSYALLINAYGKARRE 287
G++ + VT+N LM F+ + S + +++ + P +VSY +LI+ GKA R
Sbjct: 416 ASGIKPNAVTFNVLMHGLFKDGKTDRAFSLFKEMLEKEEVPPTLVSYTILIDGLGKAGRV 475
Query: 288 EEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTM 347
EA F+EM+D G+ P Y L+ + A +G + +A+ + + M + +PD+ +Y+ +
Sbjct: 476 SEAFLQFQEMIDRGIIPECHTYTSLIYSLAKAGRIPEAKKLVEDMVKLGVNPDVQAYSAL 535
Query: 348 LSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGY 386
++ +++S ++ A F+ + + G PN +TY L +G+
Sbjct: 536 ITGLIDSSMVDTAWDVFQEMMKRGCAPNEVTYKVLRRGF 574
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 82/320 (25%), Positives = 159/320 (49%), Gaps = 7/320 (2%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
++ + K N+A++V++ M ++G P + T+L+ Y GR + A + M + G
Sbjct: 254 IVHGFCKLDMINEAKEVIAQMRERGCEPGLFIFTSLLSYYLSKGRAEEAYQVLTEMTARG 313
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
P + Y ++ L + EA VF +++++ +P D + +I + K G E
Sbjct: 314 CAPDVILYTSLIDLLFSTGRVPEARHVFDSMIEKGCAP---DALTYGTIIQNFSKIGNVE 370
Query: 222 KARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSK---IYDQMQRAGLQPDVVSYALLI 278
A ++ LMA+ GV YNSLM + V + +YD+M +G++P+ V++ +L+
Sbjct: 371 AAGEILELMAKSGVGPDCFAYNSLMDGYVKLERVDQAFGVYDRMVASGIKPNAVTFNVLM 430
Query: 279 NAYGKARREEEALAVFEEMLDAG-VRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRC 337
+ K + + A ++F+EML+ V PT +Y IL+D +G V +A F+ M
Sbjct: 431 HGLFKDGKTDRAFSLFKEMLEKEEVPPTLVSYTILIDGLGKAGRVSEAFLQFQEMIDRGI 490
Query: 338 SPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMME 397
P+ +YT+++ + A + A+K + + G P+V Y LI G + ++ +
Sbjct: 491 IPECHTYTSLIYSLAKAGRIPEAKKLVEDMVKLGVNPDVQAYSALITGLIDSSMVDTAWD 550
Query: 398 IYDKMRVNGIKPNQTIFTTI 417
++ +M G PN+ + +
Sbjct: 551 VFQEMMKRGCAPNEVTYKVL 570
Score = 131 bits (330), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 83/369 (22%), Positives = 172/369 (46%), Gaps = 7/369 (1%)
Query: 88 IQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRY 147
+Q + + + LI + K ++A K+L M KG P+ V++ +++ + +
Sbjct: 205 VQKGCVPDTITYTTLIDGFSKASKMDEARKLLDVMLTKGPEPTAVTYGSIVHGFCKLDMI 264
Query: 148 KNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMF 207
A+ + +M+ G P + +L ++ + AEE + L + PD ++
Sbjct: 265 NEAKEVIAQMRERGCEPGLFIFTSLLSYYLSKGR---AEEAYQVLTEMTARGCAPDVILY 321
Query: 208 HMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLM---SFETNYKEVSKIYDQMQR 264
+I + G +AR +F M E+G +TY +++ S N + +I + M +
Sbjct: 322 TSLIDLLFSTGRVPEARHVFDSMIEKGCAPDALTYGTIIQNFSKIGNVEAAGEILELMAK 381
Query: 265 AGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQ 324
+G+ PD +Y L++ Y K R ++A V++ M+ +G++P +N+L+ G D+
Sbjct: 382 SGVGPDCFAYNSLMDGYVKLERVDQAFGVYDRMVASGIKPNAVTFNVLMHGLFKDGKTDR 441
Query: 325 ARTVFKCM-RRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLI 383
A ++FK M ++ P + SYT ++ A + A F+ + G +P TY +LI
Sbjct: 442 AFSLFKEMLEKEEVPPTLVSYTILIDGLGKAGRVSEAFLQFQEMIDRGIIPECHTYTSLI 501
Query: 384 KGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFP 443
AK + + ++ + M G+ P+ ++ ++ + D+A ++EM G
Sbjct: 502 YSLAKAGRIPEAKKLVEDMVKLGVNPDVQAYSALITGLIDSSMVDTAWDVFQEMMKRGCA 561
Query: 444 PDQKAKNIL 452
P++ +L
Sbjct: 562 PNEVTYKVL 570
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 62/229 (27%), Positives = 111/229 (48%), Gaps = 5/229 (2%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
+ + + +I + K G+ A ++L M K G P ++ +LM+ Y + R A ++
Sbjct: 352 DALTYGTIIQNFSKIGNVEAAGEILELMAKSGVGPDCFAYNSLMDGYVKLERVDQAFGVY 411
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
RM +SG +P+A+T+ +++ + K A +F +L++E+ P P + ++I
Sbjct: 412 DRMVASGIKPNAVTFNVLMHGLFKDGKTDRAFSLFKEMLEKEEVP--PTLVSYTILIDGL 469
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSL---MSFETNYKEVSKIYDQMQRAGLQPDV 271
KAG +A F M +RG+ TY SL ++ E K+ + M + G+ PDV
Sbjct: 470 GKAGRVSEAFLQFQEMIDRGIIPECHTYTSLIYSLAKAGRIPEAKKLVEDMVKLGVNPDV 529
Query: 272 VSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISG 320
+Y+ LI + + A VF+EM+ G P Y +L F +G
Sbjct: 530 QAYSALITGLIDSSMVDTAWDVFQEMMKRGCAPNEVTYKVLRRGFRAAG 578
Score = 40.4 bits (93), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 66/145 (45%), Gaps = 7/145 (4%)
Query: 48 LRSERTRGQPLPKDLVLGTLVRLKQLKKWNVVSEVLEWLRIQSWWDFNEM----DFLMLI 103
L E + +P LV T++ + L K VSE +L+ Q D + + LI
Sbjct: 445 LFKEMLEKEEVPPTLVSYTIL-IDGLGKAGRVSEA--FLQFQEMIDRGIIPECHTYTSLI 501
Query: 104 TAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPR 163
+ K G +A+K++ M K G P V +++AL+ A +F+ M G
Sbjct: 502 YSLAKAGRIPEAKKLVEDMVKLGVNPDVQAYSALITGLIDSSMVDTAWDVFQEMMKRGCA 561
Query: 164 PSALTYQIILKLFVEANKFKEAEEV 188
P+ +TY+++ + F A + + E V
Sbjct: 562 PNEVTYKVLRRGFRAAGRALDLEAV 586
>gi|449476143|ref|XP_004154653.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At5g01110-like [Cucumis sativus]
Length = 749
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 102/403 (25%), Positives = 188/403 (46%), Gaps = 35/403 (8%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
LI AY ++G +A ++L+ + +G P ++++ A++ + G+Y A+ + M G
Sbjct: 298 LINAYCREGLVEEAFQLLNSFSSRGMEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQLG 357
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVF-------------------------------- 189
P+A TY +L + EA+E+F
Sbjct: 358 LTPNAATYNTLLVEICRRDNILEAQEIFDEMSRRGVLPDLVSFSSLIGVLARNGHLYQAL 417
Query: 190 MTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFE 249
M + E+S + PD ++ ++I + + G A K+ M RG VTYN+ ++
Sbjct: 418 MHFREMERSGIVPDNVIYTILIDGFCRNGALSDALKMRDEMLARGCFMDVVTYNTFLNGL 477
Query: 250 TN---YKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTH 306
+ + ++++M G+ PD ++ LI Y K ++AL +FE M+ ++P
Sbjct: 478 CKKKMFADADMLFNEMVERGMVPDFYTFTTLIRGYCKDGNMDKALNLFEAMVRTNLKPDK 537
Query: 307 KAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRR 366
YN L+D F +G + +A+ ++ M R PD SY T+L+ + ++ + A +
Sbjct: 538 VTYNTLIDGFCKAGEMGRAKELWDDMIRKDIIPDHISYGTVLNGFCSSGLLPEALNLCDQ 597
Query: 367 LKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKD 426
+ + G PN++T TLIKGY + ++ K E KM NGI P+ + T++D Y K +
Sbjct: 598 MLEKGIRPNLVTCNTLIKGYCRSGDMPKAYEYLSKMISNGIIPDSFSYNTLIDGYLKEAN 657
Query: 427 FDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELL 469
+ A + EME G + N++L+ + EA ++L
Sbjct: 658 LEKAFILINEMEKRGLQFNIITYNLILNGFCAEGKMQEAEQVL 700
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 106/456 (23%), Positives = 201/456 (44%), Gaps = 47/456 (10%)
Query: 37 QIEEVGSAVAVLRSERTRGQPLPKDLVLGTLVRLKQLK-KWNVVSEVLEWLRIQSWWDFN 95
++ E A +LR + + +LG LVR + W + EV ++ + N
Sbjct: 202 KLREGSEAFQILRRKGVSVSINACNKLLGGLVRTGWVDLAWEIYGEV-----VRGGIELN 256
Query: 96 EMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFR 155
+++ A K F LS M KG +V++ L+ AY R G + A +
Sbjct: 257 VYTLNIMVNALCKDRKFENVMFFLSDMEGKGVFADIVTYNTLINAYCREGLVEEAFQLLN 316
Query: 156 RMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYK 215
S G P LTY IL + K+ A++V + +L + L P+ ++ ++
Sbjct: 317 SFSSRGMEPGLLTYNAILYGLCKIGKYDRAKDVLIEML---QLGLTPNAATYNTLLVEIC 373
Query: 216 KAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSKI---YDQMQRAGLQPDVV 272
+ +A+++F M+ RGV V+++SL+ + + + +M+R+G+ PD V
Sbjct: 374 RRDNILEAQEIFDEMSRRGVLPDLVSFSSLIGVLARNGHLYQALMHFREMERSGIVPDNV 433
Query: 273 SYALLINAYGK-------ARREEEALA----------------------------VFEEM 297
Y +LI+ + + + +E LA +F EM
Sbjct: 434 IYTILIDGFCRNGALSDALKMRDEMLARGCFMDVVTYNTFLNGLCKKKMFADADMLFNEM 493
Query: 298 LDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDM 357
++ G+ P + L+ + G +D+A +F+ M R PD +Y T++ + A +M
Sbjct: 494 VERGMVPDFYTFTTLIRGYCKDGNMDKALNLFEAMVRTNLKPDKVTYNTLIDGFCKAGEM 553
Query: 358 EGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTI 417
A++ + + + +P+ I+YGT++ G+ L + + + D+M GI+PN T+
Sbjct: 554 GRAKELWDDMIRKDIIPDHISYGTVLNGFCSSGLLPEALNLCDQMLEKGIRPNLVTCNTL 613
Query: 418 MDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILL 453
+ Y ++ D A + +M S G PD + N L+
Sbjct: 614 IKGYCRSGDMPKAYEYLSKMISNGIIPDSFSYNTLI 649
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 87/354 (24%), Positives = 163/354 (46%), Gaps = 6/354 (1%)
Query: 97 MDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRR 156
+ F LI + G +A M + G P V +T L++ + R G +A +
Sbjct: 398 VSFSSLIGVLARNGHLYQALMHFREMERSGIVPDNVIYTILIDGFCRNGALSDALKMRDE 457
Query: 157 MQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKK 216
M + G +TY L + F +A+ +F +++ + PD F +I Y K
Sbjct: 458 MLARGCFMDVVTYNTFLNGLCKKKMFADADMLFNEMVER---GMVPDFYTFTTLIRGYCK 514
Query: 217 AGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSK---IYDQMQRAGLQPDVVS 273
G +KA LF M ++ VTYN+L+ E+ + ++D M R + PD +S
Sbjct: 515 DGNMDKALNLFEAMVRTNLKPDKVTYNTLIDGFCKAGEMGRAKELWDDMIRKDIIPDHIS 574
Query: 274 YALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMR 333
Y ++N + + EAL + ++ML+ G+RP N L+ + SG + +A M
Sbjct: 575 YGTVLNGFCSSGLLPEALNLCDQMLEKGIRPNLVTCNTLIKGYCRSGDMPKAYEYLSKMI 634
Query: 334 RDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLE 393
+ PD SY T++ Y+ +++E A +++ G N+ITY ++ G+ ++
Sbjct: 635 SNGIIPDSFSYNTLIDGYLKEANLEKAFILINEMEKRGLQFNIITYNLILNGFCAEGKMQ 694
Query: 394 KMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQK 447
+ ++ KM GI P+ ++++++ + + A ++ EM G PD +
Sbjct: 695 EAEQVLRKMIEIGINPDGATYSSLINGHVSQDNMKEAFRFHDEMLQRGLVPDDR 748
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 78/351 (22%), Positives = 154/351 (43%), Gaps = 28/351 (7%)
Query: 109 QGDFNKAEKVLSFMNKK--GYAPSVVSHTALMEAYGRGGRYKNAEA-IFRRMQSSGPRPS 165
+GD + K + ++ + S S +A++ RG R A+A I R ++ SG
Sbjct: 111 RGDLHLGLKFIGLVSYHFPNFKHSSXSLSAMVHFLVRGRRLSEAQACILRMVRKSG---- 166
Query: 166 ALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARK 225
++ K E + T L ++ +++ Y +A + +
Sbjct: 167 -------------VSRVKVVESLISTCFYFGSVGL-----IYDLLVRTYVQAKKLREGSE 208
Query: 226 LFALMAERGVQQSTVTYNSLMS--FETNYKEVS-KIYDQMQRAGLQPDVVSYALLINAYG 282
F ++ +GV S N L+ T + +++ +IY ++ R G++ +V + +++NA
Sbjct: 209 AFQILRRKGVSVSINACNKLLGGLVRTGWVDLAWEIYGEVVRGGIELNVYTLNIMVNALC 268
Query: 283 KARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDIC 342
K R+ E + +M GV YN L++A+ G+V++A + P +
Sbjct: 269 KDRKFENVMFFLSDMEGKGVFADIVTYNTLINAYCREGLVEEAFQLLNSFSSRGMEPGLL 328
Query: 343 SYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKM 402
+Y +L + A+ + Q G PN TY TL+ + +N+ + EI+D+M
Sbjct: 329 TYNAILYGLCKIGKYDRAKDVLIEMLQLGLTPNAATYNTLLVEICRRDNILEAQEIFDEM 388
Query: 403 RVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILL 453
G+ P+ F++++ +N A++ ++EME G PD IL+
Sbjct: 389 SRRGVLPDLVSFSSLIGVLARNGHLYQALMHFREMERSGIVPDNVIYTILI 439
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/196 (23%), Positives = 81/196 (41%)
Query: 274 YALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMR 333
Y LL+ Y +A++ E F+ + GV + A N LL +G VD A ++ +
Sbjct: 190 YDLLVRTYVQAKKLREGSEAFQILRRKGVSVSINACNKLLGGLVRTGWVDLAWEIYGEVV 249
Query: 334 RDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLE 393
R ++ + M++A E F ++ G +++TY TLI Y + +E
Sbjct: 250 RGGIELNVYTLNIMVNALCKDRKFENVMFFLSDMEGKGVFADIVTYNTLINAYCREGLVE 309
Query: 394 KMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILL 453
+ ++ + G++P + I+ K +D A EM G P+ N LL
Sbjct: 310 EAFQLLNSFSSRGMEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQLGLTPNAATYNTLL 369
Query: 454 SLAKTADERNEANELL 469
D EA E+
Sbjct: 370 VEICRRDNILEAQEIF 385
>gi|297839237|ref|XP_002887500.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297333341|gb|EFH63759.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 989
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 103/403 (25%), Positives = 193/403 (47%), Gaps = 19/403 (4%)
Query: 77 NVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTA 136
N+ SE+L +S + + F +I G G ++AE +L M +KG +P ++
Sbjct: 323 NLFSEML-----KSGVPIDTVTFNTMIHTCGTHGHLSEAESLLKKMEEKGISPDTKTYNI 377
Query: 137 LMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEE 196
L+ + G + A +R ++ G P +T++ +L + + EAE V + + +
Sbjct: 378 LLSLHADAGDIEAALKYYRNIRKVGLFPDTVTHRAVLHILCQRKMVAEAEAV---MAEMD 434
Query: 197 KSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEV- 255
++ ++ D+ +++ MY G +A+ LF ER ++ +L + Y E
Sbjct: 435 RNSIRIDEHSVPVIMQMYVNEGLVGQAKALF----ERFQLDCVLSSTTLAAVMDVYAEKG 490
Query: 256 ------SKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAY 309
+ Y + G + DV+ Y ++I AYGKA+ E+AL++F+ M + G P Y
Sbjct: 491 LWVEAETVFYGKRNMTGQRNDVLEYNVMIKAYGKAKLHEKALSIFKGMKNQGTWPDECTY 550
Query: 310 NILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQ 369
N L+ A +VD A+ + M C P +Y ++++YV + A + +K+
Sbjct: 551 NSLIQMLAGVDLVDDAQRILAEMLDSGCKPGCKTYAALIASYVRLGLLSDAVDLYEAMKK 610
Query: 370 DGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDS 429
G PN + YG+LI G+A+ +E+ ++ + M +G++ N + T+++ AY K +
Sbjct: 611 TGVKPNEVVYGSLINGFAESGMVEEAIQYFKLMEEHGVQSNHIVLTSLIKAYSKVGCLEE 670
Query: 430 AVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNF 472
A Y +M+ G PD A N +LSL +EA + +
Sbjct: 671 ARRVYDKMKDSGGGPDVAASNSMLSLCADLGIVSEAESIFNDL 713
Score = 112 bits (279), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 94/359 (26%), Positives = 161/359 (44%), Gaps = 7/359 (1%)
Query: 114 KAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIIL 173
+AE V++ M++ S +M+ Y G A+A+F R Q S+ T ++
Sbjct: 425 EAEAVMAEMDRNSIRIDEHSVPVIMQMYVNEGLVGQAKALFERFQLDCVL-SSTTLAAVM 483
Query: 174 KLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAER 233
++ E + EAE VF + + D +++MI Y KA +EKA +F M +
Sbjct: 484 DVYAEKGLWVEAETVFYG--KRNMTGQRNDVLEYNVMIKAYGKAKLHEKALSIFKGMKNQ 541
Query: 234 GVQQSTVTYNSLMSFETNYKEV---SKIYDQMQRAGLQPDVVSYALLINAYGKARREEEA 290
G TYNSL+ V +I +M +G +P +YA LI +Y + +A
Sbjct: 542 GTWPDECTYNSLIQMLAGVDLVDDAQRILAEMLDSGCKPGCKTYAALIASYVRLGLLSDA 601
Query: 291 LAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSA 350
+ ++E M GV+P Y L++ FA SGMV++A FK M + T+++ A
Sbjct: 602 VDLYEAMKKTGVKPNEVVYGSLINGFAESGMVEEAIQYFKLMEEHGVQSNHIVLTSLIKA 661
Query: 351 YVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPN 410
Y +E A + + ++K G P+V +++ A + + + I++ +R G +
Sbjct: 662 YSKVGCLEEARRVYDKMKDSGGGPDVAASNSMLSLCADLGIVSEAESIFNDLREKG-TCD 720
Query: 411 QTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELL 469
F T+M Y D A+ +EM G D + N +L+ + E EL
Sbjct: 721 VISFATMMYLYKGMGMLDEAIEVAEEMRESGLLRDCTSFNQVLACYAADGQLRECCELF 779
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 95/404 (23%), Positives = 168/404 (41%), Gaps = 25/404 (6%)
Query: 101 MLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFR----- 155
ML+ YGK G +A + M ++ + P V+ ++ + G + A+ F+
Sbjct: 179 MLVDVYGKAGLVKEALLWIKHMGQRMHFPDEVTMATVVRVFKNSGEFDRADRFFKGWCAG 238
Query: 156 ---------RMQSSGPRPSALTYQIILKLFVEANKFK-----EAEEVFMTLLDEEKSPLK 201
P+ + + LK F+ FK E+ + SP K
Sbjct: 239 KVNLDDLDLDSIDDFPKNGSAQSPVNLKQFLSMELFKVGARNPIEKSLHFASGSDSSPRK 298
Query: 202 PD-QKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLM---SFETNYKEVSK 257
P F+ +I +Y KAG A LF+ M + GV TVT+N+++ + E
Sbjct: 299 PRLTSTFNTLIDLYGKAGRLNDAANLFSEMLKSGVPIDTVTFNTMIHTCGTHGHLSEAES 358
Query: 258 IYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFA 317
+ +M+ G+ PD +Y +L++ + A E AL + + G+ P + +L
Sbjct: 359 LLKKMEEKGISPDTKTYNILLSLHADAGDIEAALKYYRNIRKVGLFPDTVTHRAVLHILC 418
Query: 318 ISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVI 377
MV +A V M R+ D S ++ YVN + A+ F R + D + +
Sbjct: 419 QRKMVAEAEAVMAEMDRNSIRIDEHSVPVIMQMYVNEGLVGQAKALFERFQLDCVLSST- 477
Query: 378 TYGTLIKGYA-KVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKE 436
T ++ YA K +E Y K + G + + + ++ AYGK K + A+ +K
Sbjct: 478 TLAAVMDVYAEKGLWVEAETVFYGKRNMTGQRNDVLEYNVMIKAYGKAKLHEKALSIFKG 537
Query: 437 MESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPG 480
M++ G PD+ N L+ + D ++A +L +PG
Sbjct: 538 MKNQGTWPDECTYNSLIQMLAGVDLVDDAQRILAEMLDSGCKPG 581
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 80/347 (23%), Positives = 156/347 (44%), Gaps = 10/347 (2%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
NE+ + LI + + G +A + M + G + + T+L++AY + G + A ++
Sbjct: 616 NEVVYGSLINGFAESGMVEEAIQYFKLMEEHGVQSNHIVLTSLIKAYSKVGCLEEARRVY 675
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
+M+ SG P +L L + EAE +F L ++ D F M+Y+Y
Sbjct: 676 DKMKDSGGGPDVAASNSMLSLCADLGIVSEAESIFNDLREKGTC----DVISFATMMYLY 731
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSLMSF---ETNYKEVSKIYDQMQ-RAGLQPD 270
K G ++A ++ M E G+ + ++N +++ + +E +++ +M L D
Sbjct: 732 KGMGMLDEAIEVAEEMRESGLLRDCTSFNQVLACYAADGQLRECCELFHEMLVERKLLLD 791
Query: 271 VVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFK 330
++ L K EA+A + + A L F+ G+ A +
Sbjct: 792 WGTFKTLFTLLKKGGVPSEAVAQLQTAYNEAKPLATPAITATL--FSAMGLYAYALESCQ 849
Query: 331 CMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVN 390
+ RD + +Y ++ Y + D++ A K + R+++ G P+V+T L+ Y K
Sbjct: 850 ELTRDEIPREHYAYNAVIYTYSASGDIDMALKTYMRMQEKGLEPDVVTQAYLVGIYGKAG 909
Query: 391 NLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEM 437
+E + ++ ++ ++PNQ++F + DAY D A V KEM
Sbjct: 910 MVEGVKRVHSRLTFGELEPNQSLFKAVRDAYVSANRQDLADVVKKEM 956
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 67/354 (18%), Positives = 144/354 (40%), Gaps = 16/354 (4%)
Query: 121 FMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEAN 180
F + + Y P+V+ + ++ A GR G++ + M +G P+ TY +++ ++ +A
Sbjct: 129 FQSHQSYVPNVIHYNIVLRALGRAGKWDELRLCWIEMAHNGVLPTNNTYGMLVDVYGKAG 188
Query: 181 KFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTV 240
KEA + + + PD+ ++ ++K +G +++A + F V +
Sbjct: 189 LVKEA---LLWIKHMGQRMHFPDEVTMATVVRVFKNSGEFDRADRFFKGWCAGKVNLDDL 245
Query: 241 TYNSLMSFETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDA 300
+S+ F N S + + Q ++ V AR E F D+
Sbjct: 246 DLDSIDDFPKNGSAQSPV-NLKQFLSMELFKVG----------ARNPIEKSLHFASGSDS 294
Query: 301 GVRPTH--KAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDME 358
R +N L+D + +G ++ A +F M + D ++ TM+ +
Sbjct: 295 SPRKPRLTSTFNTLIDLYGKAGRLNDAANLFSEMLKSGVPIDTVTFNTMIHTCGTHGHLS 354
Query: 359 GAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIM 418
AE +++++ G P+ TY L+ +A ++E ++ Y +R G+ P+ ++
Sbjct: 355 EAESLLKKMEEKGISPDTKTYNILLSLHADAGDIEAALKYYRNIRKVGLFPDTVTHRAVL 414
Query: 419 DAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNF 472
+ K A EM+ D+ + +++ + +A L F
Sbjct: 415 HILCQRKMVAEAEAVMAEMDRNSIRIDEHSVPVIMQMYVNEGLVGQAKALFERF 468
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 64/277 (23%), Positives = 114/277 (41%), Gaps = 26/277 (9%)
Query: 245 LMSFETNYKEVSKIYDQMQ-RAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVR 303
L+ +T + V +++ Q P+V+ Y +++ A G+A + +E + EM GV
Sbjct: 112 LLKEQTRWDRVLRVFRFFQSHQSYVPNVIHYNIVLRALGRAGKWDELRLCWIEMAHNGVL 171
Query: 304 PTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKF 363
PT+ Y +L+D + +G+V +A K M + PD + T++ + N+ + + A++F
Sbjct: 172 PTNNTYGMLVDVYGKAGLVKEALLWIKHMGQRMHFPDEVTMATVVRVFKNSGEFDRADRF 231
Query: 364 FR------------------RLKQDGFVPNVITYGT-----LIKGYAKVNNLEKMMEIYD 400
F+ ++G + + L K A+ N +EK +
Sbjct: 232 FKGWCAGKVNLDDLDLDSIDDFPKNGSAQSPVNLKQFLSMELFKVGAR-NPIEKSLHFAS 290
Query: 401 KMRVNGIKPNQT-IFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTA 459
+ KP T F T++D YGK + A + EM G P D N ++ T
Sbjct: 291 GSDSSPRKPRLTSTFNTLIDLYGKAGRLNDAANLFSEMLKSGVPIDTVTFNTMIHTCGTH 350
Query: 460 DERNEANELLGNFNHPNNEPGINGLSISVDEEDDDDD 496
+EA LL P +I + D D
Sbjct: 351 GHLSEAESLLKKMEEKGISPDTKTYNILLSLHADAGD 387
>gi|449461223|ref|XP_004148341.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g18940-like [Cucumis sativus]
gi|449507064|ref|XP_004162923.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g18940-like [Cucumis sativus]
Length = 844
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 99/392 (25%), Positives = 184/392 (46%), Gaps = 42/392 (10%)
Query: 101 MLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSS 160
++I G++ ++ A K+L + Y+ V + T ++ AY R G+YK A A+F RM+
Sbjct: 202 LMIRILGRESKYSIALKLLDKIPIDKYSLDVRACTTILHAYSRNGKYKQAIAMFERMKDC 261
Query: 161 GPRPSALTYQIILKLFVEANK------------------------------------FKE 184
G PS +TY ++L ++ + + E
Sbjct: 262 GLSPSLVTYNVMLDVYGKMGRSWDKILDLLDEMRNEGLQFDEFTCSTVISACGREGLINE 321
Query: 185 AEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNS 244
A+E F+ L + S +P ++ ++ ++ KAG Y +A + M + +VTYN
Sbjct: 322 AKEFFVEL---KSSGYEPGTVTYNALLQVFGKAGIYSEALNILKEMEDNNCTLDSVTYNE 378
Query: 245 LMSFETN---YKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAG 301
L++ Y+E + + D M R G+ P+ V+Y +INAYG+A +E +AL +F +M +G
Sbjct: 379 LVAAYVRAGFYEEGATVIDTMTRKGVMPNAVTYTTVINAYGRAGKEVKALQLFNQMKKSG 438
Query: 302 VRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAE 361
P YN +L ++ + MR + C P+ ++ T+L+ + +
Sbjct: 439 CVPNVCTYNSILALLGKKSRSEEMIKILSDMRINGCPPNRITWNTLLAMCGDKGKHKFVN 498
Query: 362 KFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAY 421
FR +K GF P T+ TLI Y + + ++YD+M G P T + +++A
Sbjct: 499 HVFREMKNCGFEPGKDTFNTLISAYGRCGSELDAAKMYDEMMKAGFTPCATTYNALLNAL 558
Query: 422 GKNKDFDSAVVWYKEMESCGFPPDQKAKNILL 453
+ D+ +A +M + GF P++ + +++L
Sbjct: 559 ARRGDWKAAESVLLDMRNKGFKPNETSFSLML 590
Score = 155 bits (393), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 106/447 (23%), Positives = 199/447 (44%), Gaps = 42/447 (9%)
Query: 71 KQLKKWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPS 130
K + W+ + ++L+ +R + F+E +I+A G++G N+A++ + GY P
Sbjct: 279 KMGRSWDKILDLLDEMRNEGL-QFDEFTCSTVISACGREGLINEAKEFFVELKSSGYEPG 337
Query: 131 VVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFM 190
V++ AL++ +G+ G Y A I + M+ + ++TY ++ +V A ++E V
Sbjct: 338 TVTYNALLQVFGKAGIYSEALNILKEMEDNNCTLDSVTYNELVAAYVRAGFYEEGATVID 397
Query: 191 TLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSF-- 248
T+ + + P+ + +I Y +AG KA +LF M + G + TYNS+++
Sbjct: 398 TM---TRKGVMPNAVTYTTVINAYGRAGKEVKALQLFNQMKKSGCVPNVCTYNSILALLG 454
Query: 249 ------------------------------------ETNYKEVSKIYDQMQRAGLQPDVV 272
+ +K V+ ++ +M+ G +P
Sbjct: 455 KKSRSEEMIKILSDMRINGCPPNRITWNTLLAMCGDKGKHKFVNHVFREMKNCGFEPGKD 514
Query: 273 SYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCM 332
++ LI+AYG+ E +A +++EM+ AG P YN LL+A A G A +V M
Sbjct: 515 TFNTLISAYGRCGSELDAAKMYDEMMKAGFTPCATTYNALLNALARRGDWKAAESVLLDM 574
Query: 333 RRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNL 392
R P+ S++ ML Y ++ G E+ + + P+ + TLI K +
Sbjct: 575 RNKGFKPNETSFSLMLHCYAKGGNVRGLERIGKDIYDGQIFPSWVLLRTLILANFKCRAV 634
Query: 393 EKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNIL 452
M ++++ NG KP+ IF +++ + KN ++ A + G PD N L
Sbjct: 635 RGMERAFEELMKNGYKPDMVIFNSMLSIFAKNNMYERAQKMLDLIRESGLQPDLVTYNSL 694
Query: 453 LSLAKTADERNEANELLGNFNHPNNEP 479
+++ E +A E+L P
Sbjct: 695 MNMYARRGECWKAEEILKGLIKSGESP 721
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 88/355 (24%), Positives = 175/355 (49%), Gaps = 6/355 (1%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
L+ AY + G + + V+ M +KG P+ V++T ++ AYGR G+ A +F +M+ SG
Sbjct: 379 LVAAYVRAGFYEEGATVIDTMTRKGVMPNAVTYTTVINAYGRAGKEVKALQLFNQMKKSG 438
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
P+ TY IL L K +EE+ L D + P++ ++ ++ M G ++
Sbjct: 439 CVPNVCTYNSILALL---GKKSRSEEMIKILSDMRINGCPPNRITWNTLLAMCGDKGKHK 495
Query: 222 KARKLFALMAERGVQQSTVTYNSLMSFETNYK---EVSKIYDQMQRAGLQPDVVSYALLI 278
+F M G + T+N+L+S + +K+YD+M +AG P +Y L+
Sbjct: 496 FVNHVFREMKNCGFEPGKDTFNTLISAYGRCGSELDAAKMYDEMMKAGFTPCATTYNALL 555
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCS 338
NA + + A +V +M + G +P +++++L +A G V + K + +
Sbjct: 556 NALARRGDWKAAESVLLDMRNKGFKPNETSFSLMLHCYAKGGNVRGLERIGKDIYDGQIF 615
Query: 339 PDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEI 398
P T++ A + G E+ F L ++G+ P+++ + +++ +AK N E+ ++
Sbjct: 616 PSWVLLRTLILANFKCRAVRGMERAFEELMKNGYKPDMVIFNSMLSIFAKNNMYERAQKM 675
Query: 399 YDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILL 453
D +R +G++P+ + ++M+ Y + + A K + G PD + N ++
Sbjct: 676 LDLIRESGLQPDLVTYNSLMNMYARRGECWKAEEILKGLIKSGESPDLVSYNTII 730
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 82/340 (24%), Positives = 153/340 (45%), Gaps = 6/340 (1%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + + L+ G +G V M G+ P + L+ AYGR G +A ++
Sbjct: 477 NRITWNTLLAMCGDKGKHKFVNHVFREMKNCGFEPGKDTFNTLISAYGRCGSELDAAKMY 536
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
M +G P A TY +L +K AE V LLD KP++ F +M++ Y
Sbjct: 537 DEMMKAGFTPCATTYNALLNALARRGDWKAAESV---LLDMRNKGFKPNETSFSLMLHCY 593
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEV---SKIYDQMQRAGLQPDV 271
K G ++ + + + S V +L+ + V + ++++ + G +PD+
Sbjct: 594 AKGGNVRGLERIGKDIYDGQIFPSWVLLRTLILANFKCRAVRGMERAFEELMKNGYKPDM 653
Query: 272 VSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKC 331
V + +++ + K E A + + + ++G++P YN L++ +A G +A + K
Sbjct: 654 VIFNSMLSIFAKNNMYERAQKMLDLIRESGLQPDLVTYNSLMNMYARRGECWKAEEILKG 713
Query: 332 MRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNN 391
+ + SPD+ SY T++ + M+ A + + G P + TY T + GYA
Sbjct: 714 LIKSGESPDLVSYNTIIKGFCRQGLMQEAIRVMSEMTTRGICPCIFTYNTFVSGYAGRGM 773
Query: 392 LEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAV 431
++ E+ M KPN+ + I+D Y K + + A+
Sbjct: 774 FAEVDEVISYMIQKNCKPNELTYKIIVDGYCKARKYQDAM 813
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 92/360 (25%), Positives = 158/360 (43%), Gaps = 38/360 (10%)
Query: 45 VAVLRSERTRGQPLPKDLVLGTLVRLKQLK-KWNVVSEVLEWLRIQSWWDFNEMDFLMLI 103
+ +L R G P P + TL+ + K K V+ V ++ ++ + F LI
Sbjct: 463 IKILSDMRINGCP-PNRITWNTLLAMCGDKGKHKFVNHVFREMK-NCGFEPGKDTFNTLI 520
Query: 104 TAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPR 163
+AYG+ G A K+ M K G+ P ++ AL+ A R G +K AE++ M++ G +
Sbjct: 521 SAYGRCGSELDAAKMYDEMMKAGFTPCATTYNALLNALARRGDWKAAESVLLDMRNKGFK 580
Query: 164 PSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSP------------------------ 199
P+ ++ ++L + + + E + + D + P
Sbjct: 581 PNETSFSLMLHCYAKGGNVRGLERIGKDIYDGQIFPSWVLLRTLILANFKCRAVRGMERA 640
Query: 200 --------LKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETN 251
KPD +F+ M+ ++ K YE+A+K+ L+ E G+Q VTYNSLM+
Sbjct: 641 FEELMKNGYKPDMVIFNSMLSIFAKNNMYERAQKMLDLIRESGLQPDLVTYNSLMNMYAR 700
Query: 252 YKEVSK---IYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKA 308
E K I + ++G PD+VSY +I + + +EA+ V EM G+ P
Sbjct: 701 RGECWKAEEILKGLIKSGESPDLVSYNTIIKGFCRQGLMQEAIRVMSEMTTRGICPCIFT 760
Query: 309 YNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLK 368
YN + +A GM + V M + C P+ +Y ++ Y A + A F +K
Sbjct: 761 YNTFVSGYAGRGMFAEVDEVISYMIQKNCKPNELTYKIIVDGYCKARKYQDAMDFIFGIK 820
Score = 126 bits (316), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 72/282 (25%), Positives = 135/282 (47%), Gaps = 4/282 (1%)
Query: 203 DQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLM----SFETNYKEVSKI 258
D + +++ Y + G Y++A +F M + G+ S VTYN ++ ++ ++ +
Sbjct: 231 DVRACTTILHAYSRNGKYKQAIAMFERMKDCGLSPSLVTYNVMLDVYGKMGRSWDKILDL 290
Query: 259 YDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAI 318
D+M+ GLQ D + + +I+A G+ EA F E+ +G P YN LL F
Sbjct: 291 LDEMRNEGLQFDEFTCSTVISACGREGLINEAKEFFVELKSSGYEPGTVTYNALLQVFGK 350
Query: 319 SGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVIT 378
+G+ +A + K M + C+ D +Y +++AYV A E + + G +PN +T
Sbjct: 351 AGIYSEALNILKEMEDNNCTLDSVTYNELVAAYVRAGFYEEGATVIDTMTRKGVMPNAVT 410
Query: 379 YGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEME 438
Y T+I Y + K ++++++M+ +G PN + +I+ GK + + +M
Sbjct: 411 YTTVINAYGRAGKEVKALQLFNQMKKSGCVPNVCTYNSILALLGKKSRSEEMIKILSDMR 470
Query: 439 SCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPG 480
G PP++ N LL++ + N + + EPG
Sbjct: 471 INGCPPNRITWNTLLAMCGDKGKHKFVNHVFREMKNCGFEPG 512
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 111/223 (49%), Gaps = 8/223 (3%)
Query: 252 YKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEM----LDAGVRPTHK 307
+ ++ ++D ++ L+ D+VS ++ GK+ R A+ +FE + + V+ K
Sbjct: 142 FDSLNALFDSVKSELLEVDIVSLLKALDVLGKSER---AILLFEWVVSNSVSGDVKLDSK 198
Query: 308 AYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRL 367
A +++ A + + D+ S D+ + TT+L AY + A F R+
Sbjct: 199 AVELMIRILGRESKYSIALKLLDKIPIDKYSLDVRACTTILHAYSRNGKYKQAIAMFERM 258
Query: 368 KQDGFVPNVITYGTLIKGYAKVN-NLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKD 426
K G P+++TY ++ Y K+ + +K++++ D+MR G++ ++ +T++ A G+
Sbjct: 259 KDCGLSPSLVTYNVMLDVYGKMGRSWDKILDLLDEMRNEGLQFDEFTCSTVISACGREGL 318
Query: 427 FDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELL 469
+ A ++ E++S G+ P N LL + A +EA +L
Sbjct: 319 INEAKEFFVELKSSGYEPGTVTYNALLQVFGKAGIYSEALNIL 361
>gi|224134148|ref|XP_002321748.1| predicted protein [Populus trichocarpa]
gi|222868744|gb|EEF05875.1| predicted protein [Populus trichocarpa]
Length = 1041
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 96/392 (24%), Positives = 188/392 (47%), Gaps = 7/392 (1%)
Query: 101 MLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSS 160
M+I + G A +V M G P+ V +T L++ + + GR++ A I + M
Sbjct: 451 MIINGLCRHGSIEDASRVFEIMVSLGVKPNAVIYTTLIKGHVQEGRFQEAVRILKVMDKK 510
Query: 161 GPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGY 220
G +P L Y ++ ++ K +EA++ + +++ LKP+ + +I+ Y K+G
Sbjct: 511 GVQPDVLCYNSVIIGLCKSRKMEEAKDYLVEMIER---GLKPNVYTYGALIHGYCKSGEM 567
Query: 221 EKARKLFALMAERGVQQSTVTYNSLM---SFETNYKEVSKIYDQMQRAGLQPDVVSYALL 277
+ A + F M G+ + V +L+ E + E + I+ M + PDV +Y+ L
Sbjct: 568 QVADRYFKEMLGCGIAPNDVVCTALIDGYCKEGSTTEATSIFRCMLGRSVHPDVRTYSAL 627
Query: 278 INAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRC 337
I+ + + + A+ + E L+ G+ P YN ++ F G + +A + + M +
Sbjct: 628 IHGLLRNGKLQGAMELLSEFLEKGLVPDVFTYNSIISGFCKQGGIGKAFQLHEYMCQKGI 687
Query: 338 SPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMME 397
SP+I +Y +++ A ++E A + F + G N +TY T+I GY K NL K
Sbjct: 688 SPNIITYNALINGLCKAGEIERARELFDGIPGKGLAHNAVTYATIIDGYCKSGNLSKAFR 747
Query: 398 IYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAK 457
++D+M + G+ P+ +++ ++D K + + A+ + E GF ++ K
Sbjct: 748 LFDEMTLKGVPPDSFVYSALIDGCRKEGNTEKALSLFLESVQKGFASTSSLNALMDGFCK 807
Query: 458 TADERNEANELLGNFNHPNNEPGINGLSISVD 489
+ + EAN+LL + + +P +I +D
Sbjct: 808 SG-KVIEANQLLEDMVDKHVKPDHVTYTILID 838
Score = 151 bits (382), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 90/348 (25%), Positives = 164/348 (47%), Gaps = 6/348 (1%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
+I Y K+ + ++ + +LS M K P+ + ++ R G ++A +F M S G
Sbjct: 417 MIEGYLKEQNTSRVKDLLSEMKKSNLVPTAYTCGMIINGLCRHGSIEDASRVFEIMVSLG 476
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
+P+A+ Y ++K V+ +F+EA + + +K ++PD ++ +I K+ E
Sbjct: 477 VKPNAVIYTTLIKGHVQEGRFQEAVRILKVM---DKKGVQPDVLCYNSVIIGLCKSRKME 533
Query: 222 KARKLFALMAERGVQQSTVTYNSLMSFETNYKEVS---KIYDQMQRAGLQPDVVSYALLI 278
+A+ M ERG++ + TY +L+ E+ + + +M G+ P+ V LI
Sbjct: 534 EAKDYLVEMIERGLKPNVYTYGALIHGYCKSGEMQVADRYFKEMLGCGIAPNDVVCTALI 593
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCS 338
+ Y K EA ++F ML V P + Y+ L+ +G + A +
Sbjct: 594 DGYCKEGSTTEATSIFRCMLGRSVHPDVRTYSALIHGLLRNGKLQGAMELLSEFLEKGLV 653
Query: 339 PDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEI 398
PD+ +Y +++S + + A + + Q G PN+ITY LI G K +E+ E+
Sbjct: 654 PDVFTYNSIISGFCKQGGIGKAFQLHEYMCQKGISPNIITYNALINGLCKAGEIERAREL 713
Query: 399 YDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQ 446
+D + G+ N + TI+D Y K+ + A + EM G PPD
Sbjct: 714 FDGIPGKGLAHNAVTYATIIDGYCKSGNLSKAFRLFDEMTLKGVPPDS 761
Score = 142 bits (357), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 97/362 (26%), Positives = 166/362 (45%), Gaps = 40/362 (11%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
LI Y K G+ A++ M G AP+ V TAL++ Y + G A +IFR M
Sbjct: 557 LIHGYCKSGEMQVADRYFKEMLGCGIAPNDVVCTALIDGYCKEGSTTEATSIFRCMLGRS 616
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
P TY ++ + K + A E+ L++ L PD ++ +I + K GG
Sbjct: 617 VHPDVRTYSALIHGLLRNGKLQGAMELLSEFLEK---GLVPDVFTYNSIISGFCKQGGIG 673
Query: 222 KARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSK---IYDQMQRAGLQPDVVSYALLI 278
KA +L M ++G+ + +TYN+L++ E+ + ++D + GL + V+YA +I
Sbjct: 674 KAFQLHEYMCQKGISPNIITYNALINGLCKAGEIERARELFDGIPGKGLAHNAVTYATII 733
Query: 279 NAYGKARREEEALAVFEEMLDAGVRP-----------------THKAY------------ 309
+ Y K+ +A +F+EM GV P T KA
Sbjct: 734 DGYCKSGNLSKAFRLFDEMTLKGVPPDSFVYSALIDGCRKEGNTEKALSLFLESVQKGFA 793
Query: 310 -----NILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFF 364
N L+D F SG V +A + + M PD +YT ++ + ++ AE+FF
Sbjct: 794 STSSLNALMDGFCKSGKVIEANQLLEDMVDKHVKPDHVTYTILIDYHCKTGFLKEAEQFF 853
Query: 365 RRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKN 424
+++ +PN +TY L+ GY +M ++D+M I+P+ ++ ++DA+ K
Sbjct: 854 VDMQKRNLMPNALTYTALLSGYNMAGRRSEMFALFDEMIAKDIEPDGVTWSVMIDAHLKE 913
Query: 425 KD 426
D
Sbjct: 914 GD 915
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 95/375 (25%), Positives = 168/375 (44%), Gaps = 6/375 (1%)
Query: 101 MLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSS 160
++I + G+ ++A ++ M+KKG V +++ L++ +G+ R A+ + M S
Sbjct: 276 VVIGGLCRAGEVDEAFELKKLMDKKGLVADVFTYSILIDGFGKQKRCTEAKLMLEEMFSK 335
Query: 161 GPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGY 220
G +P + Y ++ F+ EA V +L +K + ++ ++ K G
Sbjct: 336 GLKPGHVAYTALIDGFMRQGDSGEAFRVKEEMLAR---GVKLNLFTYNALVKGVCKFGDM 392
Query: 221 EKARKLFALMAERGVQQSTVTYNSLMSF---ETNYKEVSKIYDQMQRAGLQPDVVSYALL 277
EKA L M G++ T TYN+++ E N V + +M+++ L P + ++
Sbjct: 393 EKADALLNEMIMVGIKPDTQTYNNMIEGYLKEQNTSRVKDLLSEMKKSNLVPTAYTCGMI 452
Query: 278 INAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRC 337
IN + E+A VFE M+ GV+P Y L+ G +A + K M +
Sbjct: 453 INGLCRHGSIEDASRVFEIMVSLGVKPNAVIYTTLIKGHVQEGRFQEAVRILKVMDKKGV 512
Query: 338 SPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMME 397
PD+ Y +++ + ME A+ + + + G PNV TYG LI GY K ++
Sbjct: 513 QPDVLCYNSVIIGLCKSRKMEEAKDYLVEMIERGLKPNVYTYGALIHGYCKSGEMQVADR 572
Query: 398 IYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAK 457
+ +M GI PN + T ++D Y K A ++ M PD + + L+
Sbjct: 573 YFKEMLGCGIAPNDVVCTALIDGYCKEGSTTEATSIFRCMLGRSVHPDVRTYSALIHGLL 632
Query: 458 TADERNEANELLGNF 472
+ A ELL F
Sbjct: 633 RNGKLQGAMELLSEF 647
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 93/431 (21%), Positives = 177/431 (41%), Gaps = 35/431 (8%)
Query: 77 NVVSEVLEWLRIQSWWDF-----NEMDFLMLITAYGKQGDFNKAEKVLSFMN----KKGY 127
N+V+E+ +L ++W N++ ++ + KQ N +++L F N + G+
Sbjct: 40 NIVNEITTFLNQKNWESLLPLVSNKLSPDVVHSVITKQ--VNDPKRLLDFFNWVQFQMGF 97
Query: 128 APSVVSHTALMEAYGRGGRYKNAEAIFRRM--QSSGPRPSALTYQIILKLFVEANKFKEA 185
+ + S + L + A+++ +M SSG L I K
Sbjct: 98 SQKLQSFSILALILCNSRLFSRADSVVNQMIMMSSGGYSEILDSLI-----------KSC 146
Query: 186 EEVFMTLLDEEKSPLKPDQKM-FHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNS 244
+E + ++ ++ D+ + F ++I YKK G +++A F G + N
Sbjct: 147 KEFDLNNVNGNENSNNNDRGVVFELLIDGYKKKGLFDEAVSFFLGAKRNGFVVGLLCCNG 206
Query: 245 LMS--FETNYKEVS-KIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAG 301
L+S + N E+ + Y+ M A + DV +Y LINA+ +A +E + EM + G
Sbjct: 207 LLSDLLKANKLELFWRFYNGMLEANVLHDVYTYTHLINAHFRAGNAKEGKRLLFEMEEKG 266
Query: 302 VRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAE 361
P+ YN+++ +G VD+A + K M + D+ +Y+ ++ + A+
Sbjct: 267 CSPSLVTYNVVIGGLCRAGEVDEAFELKKLMDKKGLVADVFTYSILIDGFGKQKRCTEAK 326
Query: 362 KFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAY 421
+ G P + Y LI G+ + + + + ++M G+K N + ++
Sbjct: 327 LMLEEMFSKGLKPGHVAYTALIDGFMRQGDSGEAFRVKEEMLARGVKLNLFTYNALVKGV 386
Query: 422 GKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPG- 480
K D + A EM G PD + N ++ + +LL N P
Sbjct: 387 CKFGDMEKADALLNEMIMVGIKPDTQTYNNMIEGYLKEQNTSRVKDLLSEMKKSNLVPTA 446
Query: 481 ------INGLS 485
INGL
Sbjct: 447 YTCGMIINGLC 457
>gi|8493580|gb|AAF75803.1|AC011000_6 Contains weak similarity to leaf protein from Ipomea nil gb|D85101
and contains a RepB PF|01051 protein and multiple PPR
PF|01535 repeats [Arabidopsis thaliana]
Length = 613
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 111/474 (23%), Positives = 219/474 (46%), Gaps = 45/474 (9%)
Query: 48 LRSERTRGQPLPKDLVLGTLVR-LKQLKKWNVV---SEVLEWLRIQ-SWWDFNEMDFLML 102
L E + +PLP + L+ + ++ K+++V E ++ LRI + +N +L
Sbjct: 51 LFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYN-----IL 105
Query: 103 ITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGP 162
I + ++ A VL M K GY P +V+ ++L+ Y G R A A+ +M
Sbjct: 106 INCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEY 165
Query: 163 RPSALTYQIILKLFVEANKFKEAEEVF-------------------------------MT 191
+P+ +T+ ++ NK EA + ++
Sbjct: 166 QPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALS 225
Query: 192 LLDE-EKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFET 250
LL + EK ++ D ++ +I A LF M +G++ + VTYNSL+
Sbjct: 226 LLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLC 285
Query: 251 NY---KEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHK 307
NY + S++ M + P+VV+++ LI+A+ K + EA +++EM+ + P
Sbjct: 286 NYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIF 345
Query: 308 AYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRL 367
Y+ L++ F + +D+A+ +F+ M C P++ +Y T++ + A +E + FR +
Sbjct: 346 TYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREM 405
Query: 368 KQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDF 427
Q G V N +TY TLI+G + + + +I+ KM +G+ P+ ++ ++D K
Sbjct: 406 SQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKL 465
Query: 428 DSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGI 481
+ A+V ++ ++ PD NI++ A + + +L + + +P +
Sbjct: 466 EKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNV 519
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 95/357 (26%), Positives = 178/357 (49%), Gaps = 6/357 (1%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
+I A + N A + + M+ KG P+VV++ +L+ GR+ +A + M
Sbjct: 245 IIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERK 304
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
P+ +T+ ++ FV+ K EAE+++ ++ K + PD + +I + +
Sbjct: 305 INPNVVTFSALIDAFVKEGKLVEAEKLYDEMI---KRSIDPDIFTYSSLINGFCMHDRLD 361
Query: 222 KARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSK---IYDQMQRAGLQPDVVSYALLI 278
+A+ +F LM + + VTYN+L+ K V + ++ +M + GL + V+Y LI
Sbjct: 362 EAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLI 421
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCS 338
+A + A +F++M+ GV P Y+ILLD G +++A VF+ +++ +
Sbjct: 422 QGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKME 481
Query: 339 PDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEI 398
PDI +Y M+ A +E F L G PNVI Y T+I G+ + E+ +
Sbjct: 482 PDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADAL 541
Query: 399 YDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSL 455
+ +M+ +G PN + T++ A ++ D ++ KEM SCGF D ++++++
Sbjct: 542 FREMKEDGTLPNSGTYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTISMVINM 598
Score = 149 bits (375), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 91/355 (25%), Positives = 168/355 (47%), Gaps = 6/355 (1%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
++ K+GD + A +L M K VV +T +++A +A +F M + G
Sbjct: 210 VVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKG 269
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
RP+ +TY +++ ++ +A + +++ + + P+ F +I + K G
Sbjct: 270 IRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERK---INPNVVTFSALIDAFVKEGKLV 326
Query: 222 KARKLFALMAERGVQQSTVTYNSLM---SFETNYKEVSKIYDQMQRAGLQPDVVSYALLI 278
+A KL+ M +R + TY+SL+ E +++ M P+VV+Y LI
Sbjct: 327 EAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLI 386
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCS 338
+ KA+R EE + +F EM G+ YN L+ +G D A+ +FK M D
Sbjct: 387 KGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVP 446
Query: 339 PDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEI 398
PDI +Y+ +L +E A F L++ P++ TY +I+G K +E ++
Sbjct: 447 PDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDL 506
Query: 399 YDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILL 453
+ + + G+KPN I+TT++ + + + A ++EM+ G P+ N L+
Sbjct: 507 FCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLI 561
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 93/365 (25%), Positives = 175/365 (47%), Gaps = 43/365 (11%)
Query: 59 PKDLVLGTLVR-LKQLKKWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEK 117
P + +L+R L +W+ S +L + I+ + N + F LI A+ K+G +AEK
Sbjct: 272 PNVVTYNSLIRCLCNYGRWSDASRLLSDM-IERKINPNVVTFSALIDAFVKEGKLVEAEK 330
Query: 118 VLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFV 177
+ M K+ P + ++++L+ + R A+ +F M S P+ +TY ++K F
Sbjct: 331 LYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFC 390
Query: 178 EANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQ 237
+A + +E E LF M++RG+
Sbjct: 391 KAKRVEEGME--------------------------------------LFREMSQRGLVG 412
Query: 238 STVTYNSLMS--FETNYKEVS-KIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVF 294
+TVTYN+L+ F+ +++ KI+ +M G+ PD+++Y++L++ K + E+AL VF
Sbjct: 413 NTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVF 472
Query: 295 EEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNA 354
E + + + P YNI+++ +G V+ +F + P++ YTTM+S +
Sbjct: 473 EYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRK 532
Query: 355 SDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIF 414
E A+ FR +K+DG +PN TY TLI+ + + E+ +MR G + +
Sbjct: 533 GLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTI 592
Query: 415 TTIMD 419
+ +++
Sbjct: 593 SMVIN 597
Score = 101 bits (252), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 79/326 (24%), Positives = 140/326 (42%), Gaps = 10/326 (3%)
Query: 149 NAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKP--DQKM 206
+A +F M S P PS + + +L + NKF + L E L+ D
Sbjct: 47 DAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFD-----LVISLGERMQNLRISYDLYS 101
Query: 207 FHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSK---IYDQMQ 263
++++I + + A + M + G + VT +SL++ + K +S+ + DQM
Sbjct: 102 YNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMF 161
Query: 264 RAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVD 323
QP+ V++ LI+ + EA+A+ + M+ G +P Y +++ G +D
Sbjct: 162 VMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDID 221
Query: 324 QARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLI 383
A ++ K M + + D+ YTT++ A N ++ A F + G PNV+TY +LI
Sbjct: 222 LALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLI 281
Query: 384 KGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFP 443
+ + M I PN F+ ++DA+ K A Y EM
Sbjct: 282 RCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSID 341
Query: 444 PDQKAKNILLSLAKTADERNEANELL 469
PD + L++ D +EA +
Sbjct: 342 PDIFTYSSLINGFCMHDRLDEAKHMF 367
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 60/275 (21%), Positives = 118/275 (42%), Gaps = 13/275 (4%)
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTY--------NSLMSFETNYKEVSKIYDQMQRAG 266
K+ KA LF+L RGV S +Y N L+ + + + ++ +M ++
Sbjct: 5 KRFAQLRKASPLFSL---RGVYFSAASYDYREKLSRNVLLDLKLD--DAVDLFGEMVQSR 59
Query: 267 LQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQAR 326
P +V + L++A K + + +++ E M + + +YNIL++ F + A
Sbjct: 60 PLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNILINCFCRRSQLPLAL 119
Query: 327 TVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGY 386
V M + PDI + +++L+ Y + + A ++ + PN +T+ TLI G
Sbjct: 120 AVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGL 179
Query: 387 AKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQ 446
N + + + D+M G +P+ + T+++ K D D A+ K+ME D
Sbjct: 180 FLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADV 239
Query: 447 KAKNILLSLAKTADERNEANELLGNFNHPNNEPGI 481
++ N+A L ++ P +
Sbjct: 240 VIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNV 274
>gi|449444222|ref|XP_004139874.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g62910-like [Cucumis sativus]
gi|449492651|ref|XP_004159061.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g62910-like [Cucumis sativus]
Length = 588
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 101/366 (27%), Positives = 178/366 (48%), Gaps = 12/366 (3%)
Query: 97 MDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRR 156
+ F LI + +A K+ M K G P+VV++ L++ G A +
Sbjct: 162 VTFTTLIKGLCVEHRIIEATKLFMRMQKLGCTPNVVTYGTLIKGLCALGNINIALKWHQE 221
Query: 157 MQS-SGP-----RPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMM 210
M + + P RP+ ++Y II+ + ++EA +F ++D+ ++P+ F ++
Sbjct: 222 MLNDTSPYVFNCRPNVISYSIIIDGLCKVGNWEEAICLFNEMVDQG---VQPNVVTFSVL 278
Query: 211 IYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLM---SFETNYKEVSKIYDQMQRAGL 267
I M K G KA+KL +M + G+ + TY SL+ + +++ M G
Sbjct: 279 IDMLCKEGQVIKAKKLLEMMIQIGIVPNLFTYTSLIKGFCLVGDLNSAKELFVSMPSKGY 338
Query: 268 QPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQART 327
+PDV+SY +LIN Y K + EEA+ +F EML G+ P K +LL A ++G VD A+
Sbjct: 339 EPDVISYNMLINGYCKTLKVEEAMKLFNEMLHVGMWPDVKTSGVLLKALFLAGKVDDAKE 398
Query: 328 VFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYA 387
+F+ ++ D+C L + A K F L+ ++ T+G LI G
Sbjct: 399 LFRVIKPYAMPKDLCICCIFLDGLCKNGYIFEAMKLFNELESYNMKLDIETFGCLIDGLC 458
Query: 388 KVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQK 447
K LE E+++K+ GI+P+ +++++ + K D A + +++ME G PD
Sbjct: 459 KAGKLETAWELFEKLYEEGIQPDAMAYSSMIHGFCKKGQVDKANILFQKMEENGCSPDLI 518
Query: 448 AKNILL 453
+IL+
Sbjct: 519 TYSILM 524
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 67/284 (23%), Positives = 147/284 (51%), Gaps = 6/284 (2%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + F +LI K+G KA+K+L M + G P++ ++T+L++ + G +A+ +F
Sbjct: 271 NVVTFSVLIDMLCKEGQVIKAKKLLEMMIQIGIVPNLFTYTSLIKGFCLVGDLNSAKELF 330
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
M S G P ++Y +++ + + K +EA ++F +L + PD K +++
Sbjct: 331 VSMPSKGYEPDVISYNMLINGYCKTLKVEEAMKLFNEMLH---VGMWPDVKTSGVLLKAL 387
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSLMS--FETNYK-EVSKIYDQMQRAGLQPDV 271
AG + A++LF ++ + + + + Y E K++++++ ++ D+
Sbjct: 388 FLAGKVDDAKELFRVIKPYAMPKDLCICCIFLDGLCKNGYIFEAMKLFNELESYNMKLDI 447
Query: 272 VSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKC 331
++ LI+ KA + E A +FE++ + G++P AY+ ++ F G VD+A +F+
Sbjct: 448 ETFGCLIDGLCKAGKLETAWELFEKLYEEGIQPDAMAYSSMIHGFCKKGQVDKANILFQK 507
Query: 332 MRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPN 375
M + CSPD+ +Y+ ++ + ++ +E + R+ + P+
Sbjct: 508 MEENGCSPDLITYSILMRGFYESNKLEKVVQLLHRMIEKDVWPD 551
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 73/337 (21%), Positives = 164/337 (48%), Gaps = 8/337 (2%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + + ++I K G++ +A + + M +G P+VV+ + L++ + G+ A+ +
Sbjct: 236 NVISYSIIIDGLCKVGNWEEAICLFNEMVDQGVQPNVVTFSVLIDMLCKEGQVIKAKKLL 295
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
M G P+ TY ++K F A+E+F+++ +PD ++M+I Y
Sbjct: 296 EMMIQIGIVPNLFTYTSLIKGFCLVGDLNSAKELFVSM---PSKGYEPDVISYNMLINGY 352
Query: 215 KKAGGYEKARKLFALMAERG----VQQSTVTYNSLMSFETNYKEVSKIYDQMQRAGLQPD 270
K E+A KLF M G V+ S V +L + +++ ++ + D
Sbjct: 353 CKTLKVEEAMKLFNEMLHVGMWPDVKTSGVLLKALF-LAGKVDDAKELFRVIKPYAMPKD 411
Query: 271 VVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFK 330
+ + ++ K EA+ +F E+ ++ + + L+D +G ++ A +F+
Sbjct: 412 LCICCIFLDGLCKNGYIFEAMKLFNELESYNMKLDIETFGCLIDGLCKAGKLETAWELFE 471
Query: 331 CMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVN 390
+ + PD +Y++M+ + ++ A F++++++G P++ITY L++G+ + N
Sbjct: 472 KLYEEGIQPDAMAYSSMIHGFCKKGQVDKANILFQKMEENGCSPDLITYSILMRGFYESN 531
Query: 391 NLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDF 427
LEK++++ +M + P+ I+ + D K++ +
Sbjct: 532 KLEKVVQLLHRMIEKDVWPDDGIYAIVEDMVCKDEKY 568
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 83/377 (22%), Positives = 160/377 (42%), Gaps = 38/377 (10%)
Query: 67 LVRLKQLKKWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKG 126
L L +++ ++ V + + + + W + + +LI N+ ++ + ++G
Sbjct: 98 LAGLAKIEHYSQVFSLYKQMHLAGLWP-DLLTLNILINCLCNVNRINEGLAAMAGIMRRG 156
Query: 127 YAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAE 186
Y P VV+ T L++ R A +F RMQ G P+ +TY ++K A
Sbjct: 157 YIPDVVTFTTLIKGLCVEHRIIEATKLFMRMQKLGCTPNVVTYGTLIKGLCALGNINIAL 216
Query: 187 EVFMTLLDEEKSP----LKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTY 242
+ +L++ SP +P+ + ++I K G +E+A LF
Sbjct: 217 KWHQEMLND-TSPYVFNCRPNVISYSIIIDGLCKVGNWEEAICLF--------------- 260
Query: 243 NSLMSFETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGV 302
++M G+QP+VV++++LI+ K + +A + E M+ G+
Sbjct: 261 -----------------NEMVDQGVQPNVVTFSVLIDMLCKEGQVIKAKKLLEMMIQIGI 303
Query: 303 RPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEK 362
P Y L+ F + G ++ A+ +F M PD+ SY +++ Y +E A K
Sbjct: 304 VPNLFTYTSLIKGFCLVGDLNSAKELFVSMPSKGYEPDVISYNMLINGYCKTLKVEEAMK 363
Query: 363 FFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYG 422
F + G P+V T G L+K ++ E++ ++ + + I +D
Sbjct: 364 LFNEMLHVGMWPDVKTSGVLLKALFLAGKVDDAKELFRVIKPYAMPKDLCICCIFLDGLC 423
Query: 423 KNKDFDSAVVWYKEMES 439
KN A+ + E+ES
Sbjct: 424 KNGYIFEAMKLFNELES 440
>gi|242074832|ref|XP_002447352.1| hypothetical protein SORBIDRAFT_06g033480 [Sorghum bicolor]
gi|241938535|gb|EES11680.1| hypothetical protein SORBIDRAFT_06g033480 [Sorghum bicolor]
Length = 888
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 97/395 (24%), Positives = 189/395 (47%), Gaps = 43/395 (10%)
Query: 98 DFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRM 157
+F +++ Y K+GD + A M +G P+ T+L+ AY + A + M
Sbjct: 255 EFGLMVVYYAKRGDKHHARATFENMRARGIEPNAFVFTSLVHAYAVARDMRGALSCVEEM 314
Query: 158 QSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPL-KPDQKMFHMMIYMYKK 216
+S G + +TY I++ + + N + A+++F E K+ L + ++ +I+ + +
Sbjct: 315 KSEGLEMTVVTYSILIAGYGKTNDAESADKLF----KEAKTKLDNLNGIIYSNIIHAHCQ 370
Query: 217 AGGYEKARKLFALMAERGVQQSTVTYNSLM---SFETNYKEVSKIYDQMQRAGLQPDVVS 273
+G ++A +L M E G+ Y+S+M + + K+ ++++++ G +P ++S
Sbjct: 371 SGNMDRAEELVREMEEDGIDAPIDVYHSMMHGYTVAQDEKKCLIVFERLKECGFRPSIIS 430
Query: 274 YALLINAYGKARREEEALAV-----------------------------------FEEML 298
Y LIN Y K + +ALAV FE+M+
Sbjct: 431 YGCLINLYVKIGKVPKALAVSKEMESHGIKHNNKTYSMLINGFIHLHDFANAFSIFEDMI 490
Query: 299 DAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDME 358
+G++P YN+L++AF G +D+A +F+ M+++R P ++ ++ + A DM+
Sbjct: 491 KSGLQPDRAIYNLLVEAFCKMGNMDRAIRIFERMKKERMQPSNRTFRPIIEGFAVAGDMK 550
Query: 359 GAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIM 418
A +++ G P V+TY LI G + + +E+ + + DKM + GI PN+ +T IM
Sbjct: 551 RALDTLDLMRRSGCAPTVMTYNALIHGLIRKHQVERAVSVLDKMSIAGIAPNEHTYTIIM 610
Query: 419 DAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILL 453
Y + D A ++ +++ G D LL
Sbjct: 611 RGYAASGDIGKAFEYFTKIKESGLKLDVYIYETLL 645
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 93/391 (23%), Positives = 185/391 (47%), Gaps = 41/391 (10%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
++ Y D K V + + G+ PS++S+ L+ Y + G+ A A+ + M+S G
Sbjct: 399 MMHGYTVAQDEKKCLIVFERLKECGFRPSIISYGCLINLYVKIGKVPKALAVSKEMESHG 458
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
+ + TY +++ F+ + F A +F ++ KS L+PD+ ++++++ + K G +
Sbjct: 459 IKHNNKTYSMLINGFIHLHDFANAFSIFEDMI---KSGLQPDRAIYNLLVEAFCKMGNMD 515
Query: 222 KARKLFALMAERGVQQSTVTYNSLM---SFETNYKEVSKIYDQMQRAGLQPDVVSYALLI 278
+A ++F M + +Q S T+ ++ + + K D M+R+G P V++Y LI
Sbjct: 516 RAIRIFERMKKERMQPSNRTFRPIIEGFAVAGDMKRALDTLDLMRRSGCAPTVMTYNALI 575
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCS 338
+ + + E A++V ++M AG+ P Y I++ +A SG + +A F ++
Sbjct: 576 HGLIRKHQVERAVSVLDKMSIAGIAPNEHTYTIIMRGYAASGDIGKAFEYFTKIKESGLK 635
Query: 339 PDICSYTTMLSAYVNASDMEGA-----------------------------------EKF 363
D+ Y T+L A + M+ A
Sbjct: 636 LDVYIYETLLRACCKSGRMQSALAVTREMSFQKIPRNTFIYNILIDGWARRGDVWEAADL 695
Query: 364 FRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGK 423
+++K+DG PN+ T+ + I K ++++ + +M G+KPN FTT++ + K
Sbjct: 696 MKQMKEDGIPPNIHTFTSYINACCKAGDMQRAENVIQEMADVGLKPNVKTFTTLIKGWAK 755
Query: 424 NKDFDSAVVWYKEMESCGFPPDQKAKNILLS 454
D A+ ++EM+S G PD+ A + L++
Sbjct: 756 VSLPDRALKCFEEMKSAGLKPDEAAYHCLVT 786
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 93/396 (23%), Positives = 184/396 (46%), Gaps = 6/396 (1%)
Query: 97 MDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRR 156
+ + +LI YGK D A+K+ K + + ++ ++ A+ + G AE + R
Sbjct: 324 VTYSILIAGYGKTNDAESADKLFKEAKTKLDNLNGIIYSNIIHAHCQSGNMDRAEELVRE 383
Query: 157 MQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKK 216
M+ G Y ++ + A K+ VF L ++ +P + +I +Y K
Sbjct: 384 MEEDGIDAPIDVYHSMMHGYTVAQDEKKCLIVFERL---KECGFRPSIISYGCLINLYVK 440
Query: 217 AGGYEKARKLFALMAERGVQQSTVTYNSLMS---FETNYKEVSKIYDQMQRAGLQPDVVS 273
G KA + M G++ + TY+ L++ ++ I++ M ++GLQPD
Sbjct: 441 IGKVPKALAVSKEMESHGIKHNNKTYSMLINGFIHLHDFANAFSIFEDMIKSGLQPDRAI 500
Query: 274 YALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMR 333
Y LL+ A+ K + A+ +FE M ++P+++ + +++ FA++G + +A MR
Sbjct: 501 YNLLVEAFCKMGNMDRAIRIFERMKKERMQPSNRTFRPIIEGFAVAGDMKRALDTLDLMR 560
Query: 334 RDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLE 393
R C+P + +Y ++ + +E A ++ G PN TY +++GYA ++
Sbjct: 561 RSGCAPTVMTYNALIHGLIRKHQVERAVSVLDKMSIAGIAPNEHTYTIIMRGYAASGDIG 620
Query: 394 KMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILL 453
K E + K++ +G+K + I+ T++ A K+ SA+ +EM P + NIL+
Sbjct: 621 KAFEYFTKIKESGLKLDVYIYETLLRACCKSGRMQSALAVTREMSFQKIPRNTFIYNILI 680
Query: 454 SLAKTADERNEANELLGNFNHPNNEPGINGLSISVD 489
+ EA +L+ P I+ + ++
Sbjct: 681 DGWARRGDVWEAADLMKQMKEDGIPPNIHTFTSYIN 716
Score = 138 bits (348), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 103/369 (27%), Positives = 182/369 (49%), Gaps = 14/369 (3%)
Query: 59 PKDLVLGTL----VRLKQLKKWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNK 114
P + G L V++ ++ K VS+ +E I+ N + MLI + DF
Sbjct: 426 PSIISYGCLINLYVKIGKVPKALAVSKEMESHGIKH----NNKTYSMLINGFIHLHDFAN 481
Query: 115 AEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILK 174
A + M K G P + L+EA+ + G A IF RM+ +PS T++ I++
Sbjct: 482 AFSIFEDMIKSGLQPDRAIYNLLVEAFCKMGNMDRAIRIFERMKKERMQPSNRTFRPIIE 541
Query: 175 LFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERG 234
F A K A + TL +S P ++ +I+ + E+A + M+ G
Sbjct: 542 GFAVAGDMKRALD---TLDLMRRSGCAPTVMTYNALIHGLIRKHQVERAVSVLDKMSIAG 598
Query: 235 VQQSTVTYNSLMSFETNYKEVSKIYD---QMQRAGLQPDVVSYALLINAYGKARREEEAL 291
+ + TY +M ++ K ++ +++ +GL+ DV Y L+ A K+ R + AL
Sbjct: 599 IAPNEHTYTIIMRGYAASGDIGKAFEYFTKIKESGLKLDVYIYETLLRACCKSGRMQSAL 658
Query: 292 AVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAY 351
AV EM + YNIL+D +A G V +A + K M+ D P+I ++T+ ++A
Sbjct: 659 AVTREMSFQKIPRNTFIYNILIDGWARRGDVWEAADLMKQMKEDGIPPNIHTFTSYINAC 718
Query: 352 VNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQ 411
A DM+ AE + + G PNV T+ TLIKG+AKV+ ++ ++ +++M+ G+KP++
Sbjct: 719 CKAGDMQRAENVIQEMADVGLKPNVKTFTTLIKGWAKVSLPDRALKCFEEMKSAGLKPDE 778
Query: 412 TIFTTIMDA 420
+ ++ +
Sbjct: 779 AAYHCLVTS 787
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 75/261 (28%), Positives = 130/261 (49%), Gaps = 4/261 (1%)
Query: 196 EKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLM---SFETNY 252
E+ P KP ++ F +M+ Y K G AR F M RG++ + + SL+ + +
Sbjct: 246 ERIP-KPSRREFGLMVVYYAKRGDKHHARATFENMRARGIEPNAFVFTSLVHAYAVARDM 304
Query: 253 KEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNIL 312
+ ++M+ GL+ VV+Y++LI YGK E A +F+E Y+ +
Sbjct: 305 RGALSCVEEMKSEGLEMTVVTYSILIAGYGKTNDAESADKLFKEAKTKLDNLNGIIYSNI 364
Query: 313 LDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGF 372
+ A SG +D+A + + M D I Y +M+ Y A D + F RLK+ GF
Sbjct: 365 IHAHCQSGNMDRAEELVREMEEDGIDAPIDVYHSMMHGYTVAQDEKKCLIVFERLKECGF 424
Query: 373 VPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVV 432
P++I+YG LI Y K+ + K + + +M +GIK N ++ +++ + DF +A
Sbjct: 425 RPSIISYGCLINLYVKIGKVPKALAVSKEMESHGIKHNNKTYSMLINGFIHLHDFANAFS 484
Query: 433 WYKEMESCGFPPDQKAKNILL 453
+++M G PD+ N+L+
Sbjct: 485 IFEDMIKSGLQPDRAIYNLLV 505
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 68/266 (25%), Positives = 135/266 (50%), Gaps = 7/266 (2%)
Query: 99 FLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQ 158
F +I + GD +A L M + G AP+V+++ AL+ R + + A ++ +M
Sbjct: 536 FRPIIEGFAVAGDMKRALDTLDLMRRSGCAPTVMTYNALIHGLIRKHQVERAVSVLDKMS 595
Query: 159 SSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAG 218
+G P+ TY II++ + + +A E F + ++S LK D ++ ++ K+G
Sbjct: 596 IAGIAPNEHTYTIIMRGYAASGDIGKAFEYFTKI---KESGLKLDVYIYETLLRACCKSG 652
Query: 219 GYEKARKLFALMAERGVQQSTVTYNSLM---SFETNYKEVSKIYDQMQRAGLQPDVVSYA 275
+ A + M+ + + ++T YN L+ + + E + + QM+ G+ P++ ++
Sbjct: 653 RMQSALAVTREMSFQKIPRNTFIYNILIDGWARRGDVWEAADLMKQMKEDGIPPNIHTFT 712
Query: 276 LLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRD 335
INA KA + A V +EM D G++P K + L+ +A + D+A F+ M+
Sbjct: 713 SYINACCKAGDMQRAENVIQEMADVGLKPNVKTFTTLIKGWAKVSLPDRALKCFEEMKSA 772
Query: 336 RCSPDICSYTTMLSAYVN-ASDMEGA 360
PD +Y ++++ ++ A+ MEG+
Sbjct: 773 GLKPDEAAYHCLVTSLLSRATVMEGS 798
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 42/188 (22%), Positives = 90/188 (47%)
Query: 268 QPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQART 327
+P + L++ Y K + A A FE M G+ P + L+ A+A++ + A +
Sbjct: 250 KPSRREFGLMVVYYAKRGDKHHARATFENMRARGIEPNAFVFTSLVHAYAVARDMRGALS 309
Query: 328 VFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYA 387
+ M+ + + +Y+ +++ Y +D E A+K F+ K N I Y +I +
Sbjct: 310 CVEEMKSEGLEMTVVTYSILIAGYGKTNDAESADKLFKEAKTKLDNLNGIIYSNIIHAHC 369
Query: 388 KVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQK 447
+ N+++ E+ +M +GI ++ ++M Y +D ++ ++ ++ CGF P
Sbjct: 370 QSGNMDRAEELVREMEEDGIDAPIDVYHSMMHGYTVAQDEKKCLIVFERLKECGFRPSII 429
Query: 448 AKNILLSL 455
+ L++L
Sbjct: 430 SYGCLINL 437
Score = 48.5 bits (114), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 72/162 (44%), Gaps = 17/162 (10%)
Query: 319 SGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVIT 378
+G+ +AR+ + R D C + +L + D + F R+ + P+
Sbjct: 206 AGVAREARSPWHKGREDACR----EFRRVLES--RPEDWQAVVSAFERIPK----PSRRE 255
Query: 379 YGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEME 438
+G ++ YAK + ++ MR GI+PN +FT+++ AY +D A+ +EM+
Sbjct: 256 FGLMVVYYAKRGDKHHARATFENMRARGIEPNAFVFTSLVHAYAVARDMRGALSCVEEMK 315
Query: 439 SCGFPPDQKAKNILLS-LAKTADERN------EANELLGNFN 473
S G +IL++ KT D + EA L N N
Sbjct: 316 SEGLEMTVVTYSILIAGYGKTNDAESADKLFKEAKTKLDNLN 357
>gi|449442579|ref|XP_004139059.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g01110-like [Cucumis sativus]
Length = 749
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 102/403 (25%), Positives = 188/403 (46%), Gaps = 35/403 (8%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
LI AY ++G +A ++L+ + +G P ++++ A++ + G+Y A+ + M G
Sbjct: 298 LINAYCREGLVEEAFQLLNSFSSRGMEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQLG 357
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVF-------------------------------- 189
P+A TY +L + EA+E+F
Sbjct: 358 LTPNAATYNTLLVEICRRDNILEAQEIFDEMSRRGVLPDLVSFSSLIGVLARNGHLYQAL 417
Query: 190 MTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFE 249
M + E+S + PD ++ ++I + + G A K+ M RG VTYN+ ++
Sbjct: 418 MHFREMERSGIVPDNVIYTILIDGFCRNGALSDALKMRDEMLARGCFMDVVTYNTFLNGL 477
Query: 250 TN---YKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTH 306
+ + ++++M G+ PD ++ LI Y K ++AL +FE M+ ++P
Sbjct: 478 CKKKMFADADMLFNEMVERGMVPDFYTFTTLIRGYCKDGNMDKALNLFEAMVRTNLKPDK 537
Query: 307 KAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRR 366
YN L+D F +G + +A+ ++ M R PD SY T+L+ + ++ + A +
Sbjct: 538 VTYNTLIDGFCKAGEMGRAKELWDDMIRKDIIPDHISYGTVLNGFCSSGLLPEALNLCDQ 597
Query: 367 LKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKD 426
+ + G PN++T TLIKGY + ++ K E KM NGI P+ + T++D Y K +
Sbjct: 598 MLEKGIRPNLVTCNTLIKGYCRSGDMPKAYEYLSKMISNGIIPDSFSYNTLIDGYLKEAN 657
Query: 427 FDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELL 469
+ A + EME G + N++L+ + EA ++L
Sbjct: 658 LEKAFILINEMEKRGLQFNIITYNLILNGFCAEGKMQEAEQVL 700
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 106/456 (23%), Positives = 201/456 (44%), Gaps = 47/456 (10%)
Query: 37 QIEEVGSAVAVLRSERTRGQPLPKDLVLGTLVRLKQLK-KWNVVSEVLEWLRIQSWWDFN 95
++ E A +LR + + +LG LVR + W + EV ++ + N
Sbjct: 202 KLREGSEAFQILRRKGVSVSINACNKLLGGLVRTGWVDLAWEIYGEV-----VRGGIELN 256
Query: 96 EMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFR 155
+++ A K F LS M KG +V++ L+ AY R G + A +
Sbjct: 257 VYTLNIMVNALCKDRKFENVMFFLSDMEGKGVFADIVTYNTLINAYCREGLVEEAFQLLN 316
Query: 156 RMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYK 215
S G P LTY IL + K+ A++V + +L + L P+ ++ ++
Sbjct: 317 SFSSRGMEPGLLTYNAILYGLCKIGKYDRAKDVLIEML---QLGLTPNAATYNTLLVEIC 373
Query: 216 KAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSKI---YDQMQRAGLQPDVV 272
+ +A+++F M+ RGV V+++SL+ + + + +M+R+G+ PD V
Sbjct: 374 RRDNILEAQEIFDEMSRRGVLPDLVSFSSLIGVLARNGHLYQALMHFREMERSGIVPDNV 433
Query: 273 SYALLINAYGK-------ARREEEALA----------------------------VFEEM 297
Y +LI+ + + + +E LA +F EM
Sbjct: 434 IYTILIDGFCRNGALSDALKMRDEMLARGCFMDVVTYNTFLNGLCKKKMFADADMLFNEM 493
Query: 298 LDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDM 357
++ G+ P + L+ + G +D+A +F+ M R PD +Y T++ + A +M
Sbjct: 494 VERGMVPDFYTFTTLIRGYCKDGNMDKALNLFEAMVRTNLKPDKVTYNTLIDGFCKAGEM 553
Query: 358 EGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTI 417
A++ + + + +P+ I+YGT++ G+ L + + + D+M GI+PN T+
Sbjct: 554 GRAKELWDDMIRKDIIPDHISYGTVLNGFCSSGLLPEALNLCDQMLEKGIRPNLVTCNTL 613
Query: 418 MDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILL 453
+ Y ++ D A + +M S G PD + N L+
Sbjct: 614 IKGYCRSGDMPKAYEYLSKMISNGIIPDSFSYNTLI 649
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 87/354 (24%), Positives = 163/354 (46%), Gaps = 6/354 (1%)
Query: 97 MDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRR 156
+ F LI + G +A M + G P V +T L++ + R G +A +
Sbjct: 398 VSFSSLIGVLARNGHLYQALMHFREMERSGIVPDNVIYTILIDGFCRNGALSDALKMRDE 457
Query: 157 MQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKK 216
M + G +TY L + F +A+ +F +++ + PD F +I Y K
Sbjct: 458 MLARGCFMDVVTYNTFLNGLCKKKMFADADMLFNEMVER---GMVPDFYTFTTLIRGYCK 514
Query: 217 AGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSK---IYDQMQRAGLQPDVVS 273
G +KA LF M ++ VTYN+L+ E+ + ++D M R + PD +S
Sbjct: 515 DGNMDKALNLFEAMVRTNLKPDKVTYNTLIDGFCKAGEMGRAKELWDDMIRKDIIPDHIS 574
Query: 274 YALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMR 333
Y ++N + + EAL + ++ML+ G+RP N L+ + SG + +A M
Sbjct: 575 YGTVLNGFCSSGLLPEALNLCDQMLEKGIRPNLVTCNTLIKGYCRSGDMPKAYEYLSKMI 634
Query: 334 RDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLE 393
+ PD SY T++ Y+ +++E A +++ G N+ITY ++ G+ ++
Sbjct: 635 SNGIIPDSFSYNTLIDGYLKEANLEKAFILINEMEKRGLQFNIITYNLILNGFCAEGKMQ 694
Query: 394 KMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQK 447
+ ++ KM GI P+ ++++++ + + A ++ EM G PD +
Sbjct: 695 EAEQVLRKMIEIGINPDGATYSSLINGHVSQDNMKEAFRFHDEMLQRGLVPDDR 748
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 78/351 (22%), Positives = 155/351 (44%), Gaps = 28/351 (7%)
Query: 109 QGDFNKAEKVLSFMNKK--GYAPSVVSHTALMEAYGRGGRYKNAEA-IFRRMQSSGPRPS 165
+GD + K + ++ + S +S +A++ RG R A+A I R ++ SG
Sbjct: 111 RGDLHLGLKFIGLVSYHFPNFKHSSLSLSAMVHFLVRGRRLSEAQACILRMVRKSG---- 166
Query: 166 ALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARK 225
++ K E + T L ++ +++ Y +A + +
Sbjct: 167 -------------VSRVKVVESLISTCFYFGSVGL-----IYDLLVRTYVQAKKLREGSE 208
Query: 226 LFALMAERGVQQSTVTYNSLMS--FETNYKEVS-KIYDQMQRAGLQPDVVSYALLINAYG 282
F ++ +GV S N L+ T + +++ +IY ++ R G++ +V + +++NA
Sbjct: 209 AFQILRRKGVSVSINACNKLLGGLVRTGWVDLAWEIYGEVVRGGIELNVYTLNIMVNALC 268
Query: 283 KARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDIC 342
K R+ E + +M GV YN L++A+ G+V++A + P +
Sbjct: 269 KDRKFENVMFFLSDMEGKGVFADIVTYNTLINAYCREGLVEEAFQLLNSFSSRGMEPGLL 328
Query: 343 SYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKM 402
+Y +L + A+ + Q G PN TY TL+ + +N+ + EI+D+M
Sbjct: 329 TYNAILYGLCKIGKYDRAKDVLIEMLQLGLTPNAATYNTLLVEICRRDNILEAQEIFDEM 388
Query: 403 RVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILL 453
G+ P+ F++++ +N A++ ++EME G PD IL+
Sbjct: 389 SRRGVLPDLVSFSSLIGVLARNGHLYQALMHFREMERSGIVPDNVIYTILI 439
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/196 (23%), Positives = 81/196 (41%)
Query: 274 YALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMR 333
Y LL+ Y +A++ E F+ + GV + A N LL +G VD A ++ +
Sbjct: 190 YDLLVRTYVQAKKLREGSEAFQILRRKGVSVSINACNKLLGGLVRTGWVDLAWEIYGEVV 249
Query: 334 RDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLE 393
R ++ + M++A E F ++ G +++TY TLI Y + +E
Sbjct: 250 RGGIELNVYTLNIMVNALCKDRKFENVMFFLSDMEGKGVFADIVTYNTLINAYCREGLVE 309
Query: 394 KMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILL 453
+ ++ + G++P + I+ K +D A EM G P+ N LL
Sbjct: 310 EAFQLLNSFSSRGMEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQLGLTPNAATYNTLL 369
Query: 454 SLAKTADERNEANELL 469
D EA E+
Sbjct: 370 VEICRRDNILEAQEIF 385
>gi|242096872|ref|XP_002438926.1| hypothetical protein SORBIDRAFT_10g028420 [Sorghum bicolor]
gi|241917149|gb|EER90293.1| hypothetical protein SORBIDRAFT_10g028420 [Sorghum bicolor]
Length = 924
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 99/411 (24%), Positives = 197/411 (47%), Gaps = 8/411 (1%)
Query: 59 PKDLVLGTLVR-LKQLKKWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEK 117
P + L+R L +L + S +L+ + + + + M + ++I + +Q + +A
Sbjct: 381 PNKITYDNLIRGLCKLGRMGRASRILKQMT-KIGYMADTMTYNLVIEGHLRQHNKEEAFL 439
Query: 118 VLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFV 177
+L+ M K G +P+V +++ ++ + G + A + +M + G +P+A Y ++ +
Sbjct: 440 LLNEMRKGGISPNVYTYSIIINGLCQIGESERASGLLEQMIADGLKPNAFVYAPLISGYC 499
Query: 178 EANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQ 237
F A E TL + L PD ++ +I G ++A + + M E+G Q
Sbjct: 500 REGSFSLACE---TLKKMTRENLTPDLYCYNSLIIGLSNVGKMDEAIEYYDEMLEKGFQP 556
Query: 238 STVTYNSLM---SFETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVF 294
+ TY L+ S N ++ ++ QM +GL P+ YA ++ Y K+ E+ +
Sbjct: 557 NDFTYGGLIHGYSMAGNLEKAEQLLHQMLNSGLNPNDFIYAQILEGYFKSDNLEKVSSTL 616
Query: 295 EEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNA 354
+ ML+ G+ P ++ Y I++ + SG + A +V + ++ PD Y +++S + A
Sbjct: 617 KSMLEKGLMPDNRLYGIVIHNLSSSGHMQAAVSVLSVIEKNGLVPDSLIYGSLISGFCKA 676
Query: 355 SDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIF 414
+DME A + + G P + Y LI G+ K +++ I++ + G+ PN +
Sbjct: 677 ADMEKAVGLLDEMAKKGIEPGISCYNALIDGFCKSDDISHARNIFNSIICKGLPPNCVTY 736
Query: 415 TTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEA 465
TT++D Y K D A+ Y EM + G PD ++L + + + +A
Sbjct: 737 TTLIDGYCKAGDIRDAIDLYNEMLTEGVAPDAFVYSVLAAGCSNSGDLQQA 787
Score = 147 bits (371), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 93/392 (23%), Positives = 183/392 (46%), Gaps = 7/392 (1%)
Query: 81 EVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEA 140
+V+E +R ++ N + + LI + G +A M G P ++ A++
Sbjct: 264 KVVEEMR-ETGCSLNVVTYNTLIGGLCRAGAIEEAFGYKKEMEDYGLVPDGFTYGAIING 322
Query: 141 YGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPL 200
+ GR A+ + M +G P+ + Y ++ F+ A+E F + + + +
Sbjct: 323 LCKRGRPDQAKCLLDEMSCAGLMPNVVVYSTLIDGFMRQGN---ADEAFKIVKEMSAAGV 379
Query: 201 KPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSF---ETNYKEVSK 257
+P++ + +I K G +A ++ M + G T+TYN ++ + N +E
Sbjct: 380 QPNKITYDNLIRGLCKLGRMGRASRILKQMTKIGYMADTMTYNLVIEGHLRQHNKEEAFL 439
Query: 258 IYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFA 317
+ ++M++ G+ P+V +Y+++IN + E A + E+M+ G++P Y L+ +
Sbjct: 440 LLNEMRKGGISPNVYTYSIIINGLCQIGESERASGLLEQMIADGLKPNAFVYAPLISGYC 499
Query: 318 ISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVI 377
G A K M R+ +PD+ Y +++ N M+ A +++ + + GF PN
Sbjct: 500 REGSFSLACETLKKMTRENLTPDLYCYNSLIIGLSNVGKMDEAIEYYDEMLEKGFQPNDF 559
Query: 378 TYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEM 437
TYG LI GY+ NLEK ++ +M +G+ PN I+ I++ Y K+ + + K M
Sbjct: 560 TYGGLIHGYSMAGNLEKAEQLLHQMLNSGLNPNDFIYAQILEGYFKSDNLEKVSSTLKSM 619
Query: 438 ESCGFPPDQKAKNILLSLAKTADERNEANELL 469
G PD + I++ ++ A +L
Sbjct: 620 LEKGLMPDNRLYGIVIHNLSSSGHMQAAVSVL 651
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 94/418 (22%), Positives = 185/418 (44%), Gaps = 47/418 (11%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + + LI + +QG+ ++A K++ M+ G P+ +++ L+ + GR A I
Sbjct: 347 NVVVYSTLIDGFMRQGNADEAFKIVKEMSAAGVQPNKITYDNLIRGLCKLGRMGRASRIL 406
Query: 155 RRMQSSGPRPSALTYQIILKLFV-EANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYM 213
++M G +TY ++++ + + NK EE F+ L + K + P+ + ++I
Sbjct: 407 KQMTKIGYMADTMTYNLVIEGHLRQHNK----EEAFLLLNEMRKGGISPNVYTYSIIING 462
Query: 214 YKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSF---ETNYKEVSKIYDQMQRAGLQPD 270
+ G E+A L M G++ + Y L+S E ++ + +M R L PD
Sbjct: 463 LCQIGESERASGLLEQMIADGLKPNAFVYAPLISGYCREGSFSLACETLKKMTRENLTPD 522
Query: 271 VVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFK 330
+ Y LI + +EA+ ++EML+ G +P Y L+ ++++G +++A +
Sbjct: 523 LYCYNSLIIGLSNVGKMDEAIEYYDEMLEKGFQPNDFTYGGLIHGYSMAGNLEKAEQLLH 582
Query: 331 CMRRDRCSPDICSYTTMLSAYV-----------------------------------NAS 355
M +P+ Y +L Y ++
Sbjct: 583 QMLNSGLNPNDFIYAQILEGYFKSDNLEKVSSTLKSMLEKGLMPDNRLYGIVIHNLSSSG 642
Query: 356 DMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFT 415
M+ A ++++G VP+ + YG+LI G+ K ++EK + + D+M GI+P + +
Sbjct: 643 HMQAAVSVLSVIEKNGLVPDSLIYGSLISGFCKAADMEKAVGLLDEMAKKGIEPGISCYN 702
Query: 416 TIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILL-SLAKTADERNEA---NELL 469
++D + K+ D A + + G PP+ L+ K D R+ NE+L
Sbjct: 703 ALIDGFCKSDDISHARNIFNSIICKGLPPNCVTYTTLIDGYCKAGDIRDAIDLYNEML 760
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 84/351 (23%), Positives = 149/351 (42%), Gaps = 35/351 (9%)
Query: 117 KVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLF 176
KV FM G +P V +++ L+EAY + ++A+ + M+ +G + +TY ++
Sbjct: 229 KVRGFMEGAGISPDVYTYSTLIEAYCKVRDLESAKKVVEEMRETGCSLNVVTYNTLIGGL 288
Query: 177 VEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQ 236
A EE F + E L PD + +I K G ++A+ L
Sbjct: 289 CRAGAI---EEAFGYKKEMEDYGLVPDGFTYGAIINGLCKRGRPDQAKCLL--------- 336
Query: 237 QSTVTYNSLMSFETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEE 296
D+M AGL P+VV Y+ LI+ + + +EA + +E
Sbjct: 337 -----------------------DEMSCAGLMPNVVVYSTLIDGFMRQGNADEAFKIVKE 373
Query: 297 MLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASD 356
M AGV+P Y+ L+ G + +A + K M + D +Y ++ ++ +
Sbjct: 374 MSAAGVQPNKITYDNLIRGLCKLGRMGRASRILKQMTKIGYMADTMTYNLVIEGHLRQHN 433
Query: 357 MEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTT 416
E A +++ G PNV TY +I G ++ E+ + ++M +G+KPN ++
Sbjct: 434 KEEAFLLLNEMRKGGISPNVYTYSIIINGLCQIGESERASGLLEQMIADGLKPNAFVYAP 493
Query: 417 IMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANE 467
++ Y + F A K+M PD N L+ + +EA E
Sbjct: 494 LISGYCREGSFSLACETLKKMTRENLTPDLYCYNSLIIGLSNVGKMDEAIE 544
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 87/373 (23%), Positives = 159/373 (42%), Gaps = 22/373 (5%)
Query: 88 IQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRY 147
++ + N+ + LI Y G+ KAE++L M G P+ + ++E Y +
Sbjct: 550 LEKGFQPNDFTYGGLIHGYSMAGNLEKAEQLLHQMLNSGLNPNDFIYAQILEGYFKSDNL 609
Query: 148 KNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMF 207
+ + + M G P Y I++ + + A V + EK+ L PD ++
Sbjct: 610 EKVSSTLKSMLEKGLMPDNRLYGIVIHNLSSSGHMQAAVSVLSVI---EKNGLVPDSLIY 666
Query: 208 HMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSK---IYDQMQR 264
+I + KA EKA L MA++G++ YN+L+ ++S I++ +
Sbjct: 667 GSLISGFCKAADMEKAVGLLDEMAKKGIEPGISCYNALIDGFCKSDDISHARNIFNSIIC 726
Query: 265 AGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQ 324
GL P+ V+Y LI+ Y KA +A+ ++ EML GV P Y++L + SG + Q
Sbjct: 727 KGLPPNCVTYTTLIDGYCKAGDIRDAIDLYNEMLTEGVAPDAFVYSVLAAGCSNSGDLQQ 786
Query: 325 ARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIK 384
A + + M R I S+ T++ + ++ KF + VP+++T ++
Sbjct: 787 ALFITEEMIA-RGYAIISSFNTLVHGFCKRGKLQETVKFLHVMMDKDIVPSLLTVENIVI 845
Query: 385 GYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPP 444
G + L + TIF + ++D D + +M + G P
Sbjct: 846 GLGEAGKLSEA---------------HTIFVELQQKNASHRDTDHLSSLFTDMINQGLVP 890
Query: 445 DQKAKNILLSLAK 457
N++ S K
Sbjct: 891 LDVIHNMIQSHCK 903
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 86/365 (23%), Positives = 149/365 (40%), Gaps = 25/365 (6%)
Query: 128 APSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEE 187
AP +H A+ + G Y A + +M + P P ++L A
Sbjct: 119 APDAFAHLAV--SLCAAGLYPQANGLLDQMIRAYPTPP-----LVLSSVHRA-------- 163
Query: 188 VFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMS 247
++ D+ + P+ D +++ YKK G ++ LM + G+ S N L+
Sbjct: 164 --LSGSDQGRRPVVLD-----VLVDTYKKTGRVRDGAEVVLLMKDLGLAPSLRCCNGLLK 216
Query: 248 FETNYKEVS---KIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRP 304
+ K+ M+ AG+ PDV +Y+ LI AY K R E A V EEM + G
Sbjct: 217 DLLRADALDLLWKVRGFMEGAGISPDVYTYSTLIEAYCKVRDLESAKKVVEEMRETGCSL 276
Query: 305 THKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFF 364
YN L+ +G +++A K M PD +Y +++ + A+
Sbjct: 277 NVVTYNTLIGGLCRAGAIEEAFGYKKEMEDYGLVPDGFTYGAIINGLCKRGRPDQAKCLL 336
Query: 365 RRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKN 424
+ G +PNV+ Y TLI G+ + N ++ +I +M G++PN+ + ++ K
Sbjct: 337 DEMSCAGLMPNVVVYSTLIDGFMRQGNADEAFKIVKEMSAAGVQPNKITYDNLIRGLCKL 396
Query: 425 KDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGINGL 484
A K+M G+ D N+++ + EA LL P +
Sbjct: 397 GRMGRASRILKQMTKIGYMADTMTYNLVIEGHLRQHNKEEAFLLLNEMRKGGISPNVYTY 456
Query: 485 SISVD 489
SI ++
Sbjct: 457 SIIIN 461
>gi|224157081|ref|XP_002337799.1| predicted protein [Populus trichocarpa]
gi|222869732|gb|EEF06863.1| predicted protein [Populus trichocarpa]
Length = 367
Score = 156 bits (395), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 97/356 (27%), Positives = 168/356 (47%), Gaps = 6/356 (1%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
LI AY ++G +A ++++ M KG PS+ ++ A++ + GRY A+ I M + G
Sbjct: 7 LIGAYCREGLLEEAFEIMNSMADKGLKPSLFTYNAIINGLCKKGRYARAKGILIEMLNIG 66
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
P TY +L + F EA+E+F +L + + PD F ++ ++ + +
Sbjct: 67 LSPDTTTYNTLLVESCRRDNFSEAKEIFGEML---RQGVVPDLVSFSSLMAVFSRNRHLD 123
Query: 222 KARKLFALMAERGVQQSTVTYNSLM---SFETNYKEVSKIYDQMQRAGLQPDVVSYALLI 278
+A F M + G+ V Y LM N E KI D+M G DV++Y ++
Sbjct: 124 QALVYFRDMKKFGLVPDNVIYTVLMHGYCRNGNMLEALKIRDEMLEQGCVLDVIAYNTIL 183
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCS 338
N K + +A +F+EM++ G P + L+ G + +A ++F M +
Sbjct: 184 NGLCKEKMLTDADKLFDEMVERGALPDFYTFTTLIHGHCQDGNMTKALSLFGTMTQRNIK 243
Query: 339 PDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEI 398
PDI +Y T++ + +ME A + + + PN ITYG LI Y V ++ + +
Sbjct: 244 PDIVAYNTLIDGFCKVGEMEKASELWDGMISRKIFPNHITYGILINAYCSVGHVSEAFRL 303
Query: 399 YDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLS 454
+D M GIKP T++ Y ++ D A + M + G PD + N L++
Sbjct: 304 WDVMIEKGIKPTLVTCNTVIKGYCRSGDSSKADEFLGRMIAKGVAPDHISYNTLIN 359
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 88/343 (25%), Positives = 162/343 (47%), Gaps = 6/343 (1%)
Query: 131 VVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFM 190
+V++ L+ AY R G + A I M G +PS TY I+ + ++ A+ + +
Sbjct: 1 MVTYNTLIGAYCREGLLEEAFEIMNSMADKGLKPSLFTYNAIINGLCKKGRYARAKGILI 60
Query: 191 TLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFET 250
+L+ L PD ++ ++ + + +A+++F M +GV V+++SLM+ +
Sbjct: 61 EMLN---IGLSPDTTTYNTLLVESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLMAVFS 117
Query: 251 NYKEVSKI---YDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHK 307
+ + + + M++ GL PD V Y +L++ Y + EAL + +EML+ G
Sbjct: 118 RNRHLDQALVYFRDMKKFGLVPDNVIYTVLMHGYCRNGNMLEALKIRDEMLEQGCVLDVI 177
Query: 308 AYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRL 367
AYN +L+ M+ A +F M PD ++TT++ + +M A F +
Sbjct: 178 AYNTILNGLCKEKMLTDADKLFDEMVERGALPDFYTFTTLIHGHCQDGNMTKALSLFGTM 237
Query: 368 KQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDF 427
Q P+++ Y TLI G+ KV +EK E++D M I PN + +++AY
Sbjct: 238 TQRNIKPDIVAYNTLIDGFCKVGEMEKASELWDGMISRKIFPNHITYGILINAYCSVGHV 297
Query: 428 DSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLG 470
A + M G P N ++ + + ++A+E LG
Sbjct: 298 SEAFRLWDVMIEKGIKPTLVTCNTVIKGYCRSGDSSKADEFLG 340
Score = 45.4 bits (106), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 21/79 (26%), Positives = 41/79 (51%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + + +LI AY G ++A ++ M +KG P++V+ +++ Y R G A+
Sbjct: 280 NHITYGILINAYCSVGHVSEAFRLWDVMIEKGIKPTLVTCNTVIKGYCRSGDSSKADEFL 339
Query: 155 RRMQSSGPRPSALTYQIIL 173
RM + G P ++Y ++
Sbjct: 340 GRMIAKGVAPDHISYNTLI 358
>gi|356518050|ref|XP_003527697.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g11690-like [Glycine max]
Length = 556
Score = 156 bits (395), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 100/411 (24%), Positives = 203/411 (49%), Gaps = 25/411 (6%)
Query: 89 QSWWDFNEM---------DFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALME 139
++WW FNE+ F ++I + G F K ++L+ + + G +P+VV +T L++
Sbjct: 142 KAWWIFNELKSKVVLDAYSFGIMIKGCCEAGYFVKGFRLLAMLEEFGLSPNVVIYTTLID 201
Query: 140 AYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSP 199
+ G A+ +F +M G P+ TY +++ F + +E +++ + ++S
Sbjct: 202 GCCKYGNVMLAKNLFCKMDRLGLVPNPHTYSVLMNGFFKQGLQREGFQMYENM---KRSG 258
Query: 200 LKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFET---NYKEVS 256
+ P+ ++ +I Y G +KA K+FA M E+G+ +TYN L+ + E
Sbjct: 259 IVPNAYAYNCLISEYCNGGMVDKAFKVFAEMREKGIACGVMTYNILIGGLCRGKKFGEAV 318
Query: 257 KIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAF 316
K+ ++ + GL P++V+Y +LIN + + + A+ +F ++ +G+ PT YN L+ +
Sbjct: 319 KLVHKVNKVGLSPNIVTYNILINGFCDVGKMDTAVRLFNQLKSSGLSPTLVTYNTLIAGY 378
Query: 317 A----ISGMVDQARTVFKCMRRDRC-SPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDG 371
+ ++G +D + + +RC +P +YT ++ A+ + E A + +++ G
Sbjct: 379 SKVENLAGALDLVKEM-----EERCIAPSKVTYTILIDAFARLNYTEKACEMHSLMEKSG 433
Query: 372 FVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAV 431
VP+V TY LI G N+++ +++ + ++PN I+ T++ Y K A+
Sbjct: 434 LVPDVYTYSVLIHGLCVHGNMKEASKLFKSLGEMHLQPNSVIYNTMIHGYCKEGSSYRAL 493
Query: 432 VWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGIN 482
EM G P+ + + L ++ EA LLG + +P ++
Sbjct: 494 RLLNEMVHSGMVPNVASFCSTIGLLCRDEKWKEAELLLGQMINSGLKPSVS 544
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 98/382 (25%), Positives = 171/382 (44%), Gaps = 42/382 (10%)
Query: 136 ALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDE 195
++ AY A M G P + T+ ++ L + +N F +A +F +E
Sbjct: 94 TIVNAYVHSHSTDQALTFLHHMIHEGHVPLSNTFNNLMCLLIRSNYFDKAWWIF----NE 149
Query: 196 EKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEV 255
KS + D F +MI +AG + K +L A++ E G+ + V Y +L+ Y V
Sbjct: 150 LKSKVVLDAYSFGIMIKGCCEAGYFVKGFRLLAMLEEFGLSPNVVIYTTLIDGCCKYGNV 209
Query: 256 ---SKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNIL 312
++ +M R GL P+ +Y++L+N + K + E ++E M +G+ P AYN L
Sbjct: 210 MLAKNLFCKMDRLGLVPNPHTYSVLMNGFFKQGLQREGFQMYENMKRSGIVPNAYAYNCL 269
Query: 313 LDAFAISGMVDQARTVFKCMRRD--RC--------------------------------- 337
+ + GMVD+A VF MR C
Sbjct: 270 ISEYCNGGMVDKAFKVFAEMREKGIACGVMTYNILIGGLCRGKKFGEAVKLVHKVNKVGL 329
Query: 338 SPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMME 397
SP+I +Y +++ + + M+ A + F +LK G P ++TY TLI GY+KV NL ++
Sbjct: 330 SPNIVTYNILINGFCDVGKMDTAVRLFNQLKSSGLSPTLVTYNTLIAGYSKVENLAGALD 389
Query: 398 IYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAK 457
+ +M I P++ +T ++DA+ + + A + ME G PD ++L+
Sbjct: 390 LVKEMEERCIAPSKVTYTILIDAFARLNYTEKACEMHSLMEKSGLVPDVYTYSVLIHGLC 449
Query: 458 TADERNEANELLGNFNHPNNEP 479
EA++L + + +P
Sbjct: 450 VHGNMKEASKLFKSLGEMHLQP 471
Score = 111 bits (278), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 73/331 (22%), Positives = 150/331 (45%), Gaps = 6/331 (1%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + +L+ + KQG + ++ M + G P+ ++ L+ Y GG A +F
Sbjct: 227 NPHTYSVLMNGFFKQGLQREGFQMYENMKRSGIVPNAYAYNCLISEYCNGGMVDKAFKVF 286
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
M+ G +TY I++ KF EA ++ + K L P+ ++++I +
Sbjct: 287 AEMREKGIACGVMTYNILIGGLCRGKKFGEAVKLVHKV---NKVGLSPNIVTYNILINGF 343
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSKIYD---QMQRAGLQPDV 271
G + A +LF + G+ + VTYN+L++ + + ++ D +M+ + P
Sbjct: 344 CDVGKMDTAVRLFNQLKSSGLSPTLVTYNTLIAGYSKVENLAGALDLVKEMEERCIAPSK 403
Query: 272 VSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKC 331
V+Y +LI+A+ + E+A + M +G+ P Y++L+ + G + +A +FK
Sbjct: 404 VTYTILIDAFARLNYTEKACEMHSLMEKSGLVPDVYTYSVLIHGLCVHGNMKEASKLFKS 463
Query: 332 MRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNN 391
+ P+ Y TM+ Y A + + G VPNV ++ + I +
Sbjct: 464 LGEMHLQPNSVIYNTMIHGYCKEGSSYRALRLLNEMVHSGMVPNVASFCSTIGLLCRDEK 523
Query: 392 LEKMMEIYDKMRVNGIKPNQTIFTTIMDAYG 422
++ + +M +G+KP+ +++ + G
Sbjct: 524 WKEAELLLGQMINSGLKPSVSLYKMVHKVKG 554
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 61/280 (21%), Positives = 105/280 (37%), Gaps = 37/280 (13%)
Query: 256 SKIYDQMQRAGLQPDVVS---YALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNIL 312
S + Q+ +A P + Y ++NAY + ++AL M+ G P +N L
Sbjct: 71 SSLMLQLTQAHFTPCLTYTPLYDTIVNAYVHSHSTDQALTFLHHMIHEGHVPLSNTFNNL 130
Query: 313 LDAFAISGMVDQARTVFK--------------CMRRDRC--------------------S 338
+ S D+A +F M + C S
Sbjct: 131 MCLLIRSNYFDKAWWIFNELKSKVVLDAYSFGIMIKGCCEAGYFVKGFRLLAMLEEFGLS 190
Query: 339 PDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEI 398
P++ YTT++ ++ A+ F ++ + G VPN TY L+ G+ K + ++
Sbjct: 191 PNVVIYTTLIDGCCKYGNVMLAKNLFCKMDRLGLVPNPHTYSVLMNGFFKQGLQREGFQM 250
Query: 399 YDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKT 458
Y+ M+ +GI PN + ++ Y D A + EM G NIL+
Sbjct: 251 YENMKRSGIVPNAYAYNCLISEYCNGGMVDKAFKVFAEMREKGIACGVMTYNILIGGLCR 310
Query: 459 ADERNEANELLGNFNHPNNEPGINGLSISVDEEDDDDDDD 498
+ EA +L+ N P I +I ++ D D
Sbjct: 311 GKKFGEAVKLVHKVNKVGLSPNIVTYNILINGFCDVGKMD 350
>gi|359491317|ref|XP_003634263.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g61400-like [Vitis vinifera]
Length = 665
Score = 156 bits (395), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 107/408 (26%), Positives = 181/408 (44%), Gaps = 42/408 (10%)
Query: 89 QSWWDFNEMDFL-------MLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAY 141
++ W + +MD L M++ K+G F+ KV M +G +P+VV++ L++
Sbjct: 144 EALWVYYKMDVLPAMQACNMVLDGLVKKGRFDTMWKVYGDMVARGASPNVVTYGTLIDGC 203
Query: 142 GRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLK 201
R G + A +F M P+ + Y I+++ ++ EAE +F T+ S +
Sbjct: 204 CRQGDFLKAFRLFDEMIEKKIFPTVVIYTILIRGLCGESRISEAESMFRTM---RNSGML 260
Query: 202 PDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSKIYDQ 261
P+ ++ M+ Y K +KA +L Y +
Sbjct: 261 PNLYTYNTMMDGYCKIAHVKKALEL--------------------------------YQE 288
Query: 262 MQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGM 321
M GL P+VV++ +LI+ K A +M GV P YN L+D + +G
Sbjct: 289 MLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGN 348
Query: 322 VDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGT 381
+ +A ++ + + PD+ +Y+ ++ ME A+ + +K+ GF+PN +TY T
Sbjct: 349 LSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNT 408
Query: 382 LIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCG 441
LI GY K N+EK +E+ +M GI+PN F+T++D Y K ++A+ Y EM G
Sbjct: 409 LIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKG 468
Query: 442 FPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGINGLSISVD 489
PD A L+ EA L P + LS +D
Sbjct: 469 LLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCLID 516
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 94/340 (27%), Positives = 163/340 (47%), Gaps = 6/340 (1%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + + LI +QGDF KA ++ M +K P+VV +T L+ R AE++F
Sbjct: 192 NVVTYGTLIDGCCRQGDFLKAFRLFDEMIEKKIFPTVVIYTILIRGLCGESRISEAESMF 251
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
R M++SG P+ TY ++ + + K+A E++ +L + L P+ F ++I
Sbjct: 252 RTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALELYQEMLGDG---LLPNVVTFGILIDGL 308
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSLM---SFETNYKEVSKIYDQMQRAGLQPDV 271
K ARK MA GV + YN L+ N E ++ ++++ + PDV
Sbjct: 309 CKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGNLSEALSLHSEIEKHEILPDV 368
Query: 272 VSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKC 331
+Y++LI R EEA + +EM G P YN L+D + G +++A V
Sbjct: 369 FTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQ 428
Query: 332 MRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNN 391
M P+I +++T++ Y A ME A + + G +P+V+ Y LI G+ K N
Sbjct: 429 MTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGN 488
Query: 392 LEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAV 431
++ ++ +M+ G+ PN + ++D K+ A+
Sbjct: 489 TKEAFRLHKEMQEAGLHPNVFTLSCLIDGLCKDGRISDAI 528
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 89/367 (24%), Positives = 168/367 (45%), Gaps = 25/367 (6%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + F +LI K + A K L M G P++ + L++ Y + G A ++
Sbjct: 297 NVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGNLSEALSLH 356
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
++ P TY I++K ++ +EA+ + L + +K P+ ++ +I Y
Sbjct: 357 SEIEKHEILPDVFTYSILIKGLCGVDRMEEADGL---LQEMKKKGFLPNAVTYNTLIDGY 413
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSK------IYDQMQRAGLQ 268
K G EKA ++ + M E+G++ + +T+++L+ Y + K +Y +M GL
Sbjct: 414 CKEGNMEKAIEVCSQMTEKGIEPNIITFSTLID---GYCKAGKMEAAMGLYTEMVIKGLL 470
Query: 269 PDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTV 328
PDVV+Y LI+ + K +EA + +EM +AG+ P + L+D G + A +
Sbjct: 471 PDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCLIDGLCKDGRISDAIKL 530
Query: 329 FKC-------------MRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPN 375
F + R CSP+ YT ++ + A KFF ++ G P+
Sbjct: 531 FLAKTGTDTTGSKTNELDRSLCSPNHVMYTALIQGLCTDGRIFKASKFFSDMRCSGLRPD 590
Query: 376 VITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYK 435
V T +I+G+ + +L +M + + GI PN +++ + Y ++ SA+ +
Sbjct: 591 VFTCIVIIQGHFRAMHLRDVMMLQADILKMGIIPNSSVYRVLAKGYEESGYLKSALRCSE 650
Query: 436 EMESCGF 442
++ G
Sbjct: 651 DLSGIGI 657
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 63/294 (21%), Positives = 112/294 (38%), Gaps = 70/294 (23%)
Query: 277 LINAYGKARREEEALAVFEEM--LDAGVRPTHKAYNILLDAFAISGMVDQARTVF----- 329
LI +RR +VF + L++ + T + +L+ AF+ G+V++A V+
Sbjct: 96 LIQCLQNSRRSRICCSVFNVLSRLESS-KFTPNVFGVLIIAFSEMGLVEEALWVYYKMDV 154
Query: 330 -----KC-------MRRDR---------------CSPDICSYTTMLSAYVNASD------ 356
C +++ R SP++ +Y T++ D
Sbjct: 155 LPAMQACNMVLDGLVKKGRFDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFLKAFR 214
Query: 357 -----------------------------MEGAEKFFRRLKQDGFVPNVITYGTLIKGYA 387
+ AE FR ++ G +PN+ TY T++ GY
Sbjct: 215 LFDEMIEKKIFPTVVIYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYC 274
Query: 388 KVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQK 447
K+ +++K +E+Y +M +G+ PN F ++D K + SA + +M S G P+
Sbjct: 275 KIAHVKKALELYQEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIF 334
Query: 448 AKNILLSLAKTADERNEANELLGNFNHPNNEPGINGLSISVDEEDDDDDDDEDD 501
N L+ A +EA L P + SI + D +E D
Sbjct: 335 VYNCLIDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEAD 388
>gi|359481971|ref|XP_003632699.1| PREDICTED: pentatricopeptide repeat-containing protein At5g12100,
mitochondrial-like [Vitis vinifera]
Length = 819
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 97/382 (25%), Positives = 183/382 (47%), Gaps = 7/382 (1%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + + L+ + + + +AEK + M +KG P+V ++ L++ YGR + I
Sbjct: 426 NHVTYNSLVKKFCEMKNMEEAEKCIKKMVEKGVLPNVETYNTLIDGYGRSCLFDRCFQIL 485
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
M+ G +P+ ++Y ++ + EAE + L D + P+ ++++M+I
Sbjct: 486 EEMEKKGLKPNVISYGCLINCLCKDANILEAEVI---LGDMVHRGVVPNAQIYNMLIDGS 542
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSL---MSFETNYKEVSKIYDQMQRAGLQPDV 271
AG + A + F M R + + VTYN L + + E + ++ R GL DV
Sbjct: 543 CIAGKLKDAFRFFDEMVAREIVPTLVTYNILINGLCKKGKVMEAENLASEITRKGLSFDV 602
Query: 272 VSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKC 331
++Y LI+ Y A ++AL ++E M +G++PT Y+ L+ G+V +++
Sbjct: 603 ITYNSLISGYSSAGNVQKALELYETMKKSGIKPTLNTYHRLIAGCGKEGLV-LVEKIYQE 661
Query: 332 MRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNN 391
M + PD Y ++ YV D++ A ++ G P+ +TY LI G+ K
Sbjct: 662 MLQMNLVPDRVIYNALIHCYVEHGDVQKACSLHSAMEAQGIQPDKMTYNCLILGHFKEGR 721
Query: 392 LEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNI 451
+ K+ + + M++ G+ P + ++ + K KDFD A VWY+EM GF P +
Sbjct: 722 MHKVKNLVNDMKIRGLIPKTETYDILIVGHCKLKDFDGAYVWYREMFENGFTPSVSICDN 781
Query: 452 LLSLAKTADERNEANELLGNFN 473
L++ + ++A+ + N
Sbjct: 782 LITGLREEGRSHDADVICSEMN 803
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 95/356 (26%), Positives = 160/356 (44%), Gaps = 42/356 (11%)
Query: 101 MLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSS 160
+L+ A K+G+ KAE+VL + G AP V ++ Y + G A +M++
Sbjct: 362 ILLNALCKEGNMEKAEEVLKKFLENGLAPVGVFFNTIVNGYCQVGDINKAYTTIEKMEAV 421
Query: 161 GPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGY 220
G RP+ +TY ++K KF E + +
Sbjct: 422 GLRPNHVTYNSLVK------KFCEMKNM-------------------------------- 443
Query: 221 EKARKLFALMAERGVQQSTVTYNSLM---SFETNYKEVSKIYDQMQRAGLQPDVVSYALL 277
E+A K M E+GV + TYN+L+ + +I ++M++ GL+P+V+SY L
Sbjct: 444 EEAEKCIKKMVEKGVLPNVETYNTLIDGYGRSCLFDRCFQILEEMEKKGLKPNVISYGCL 503
Query: 278 INAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRC 337
IN K EA + +M+ GV P + YN+L+D I+G + A F M
Sbjct: 504 INCLCKDANILEAEVILGDMVHRGVVPNAQIYNMLIDGSCIAGKLKDAFRFFDEMVAREI 563
Query: 338 SPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMME 397
P + +Y +++ + AE + + G +VITY +LI GY+ N++K +E
Sbjct: 564 VPTLVTYNILINGLCKKGKVMEAENLASEITRKGLSFDVITYNSLISGYSSAGNVQKALE 623
Query: 398 IYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILL 453
+Y+ M+ +GIKP + ++ GK + Y+EM PD+ N L+
Sbjct: 624 LYETMKKSGIKPTLNTYHRLIAGCGK-EGLVLVEKIYQEMLQMNLVPDRVIYNALI 678
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 98/428 (22%), Positives = 190/428 (44%), Gaps = 43/428 (10%)
Query: 101 MLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSS 160
ML++ + +++ ++ M K G PSV S +E+ RY++ +F + S
Sbjct: 117 MLLSICSESKMVSESAELYMLMKKDGVLPSVASLNLFLESLVSTKRYEDTLQLFSEIVES 176
Query: 161 GPR-----------------------------------PSALTYQIILKLFVEANKFKEA 185
G R P Y +++ + + K+A
Sbjct: 177 GLRPDQFMYGKAIQAAVKLGDLKRAIELMTCMKRGGVSPGVFVYNVVIGGLCKEKRMKDA 236
Query: 186 EEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSL 245
E++F +LD + P++ ++ +I Y K G E+A + M V+ + +T+NSL
Sbjct: 237 EKLFDEMLDRR---VAPNRITYNTLIDGYCKVGQLEEAFNIRERMKVENVEPTIITFNSL 293
Query: 246 MSFETN---YKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGV 302
++ +E ++ ++M+ G PD +Y L + + K + ++ + EE + GV
Sbjct: 294 LNGLCRAQMMEEAQRVLEEMEVYGFVPDRFTYTTLFDGHLKCGNVDASITLSEEAVRKGV 353
Query: 303 RPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEK 362
+ +ILL+A G +++A V K + +P + T+++ Y D+ A
Sbjct: 354 QILDYTCSILLNALCKEGNMEKAEEVLKKFLENGLAPVGVFFNTIVNGYCQVGDINKAYT 413
Query: 363 FFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYG 422
+++ G PN +TY +L+K + ++ N+E+ + KM G+ PN + T++D YG
Sbjct: 414 TIEKMEAVGLRPNHVTYNSLVKKFCEMKNMEEAEKCIKKMVEKGVLPNVETYNTLIDGYG 473
Query: 423 KNKDFDSAVVWYKEMESCGFPPDQKAKNILL-SLAKTADERNEANELLGNFNHPNNEPGI 481
++ FD +EME G P+ + L+ L K A+ EA +LG+ H P
Sbjct: 474 RSCLFDRCFQILEEMEKKGLKPNVISYGCLINCLCKDANIL-EAEVILGDMVHRGVVPNA 532
Query: 482 NGLSISVD 489
++ +D
Sbjct: 533 QIYNMLID 540
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 85/366 (23%), Positives = 174/366 (47%), Gaps = 6/366 (1%)
Query: 103 ITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGP 162
I A K GD +A ++++ M + G +P V + ++ + R K+AE +F M
Sbjct: 189 IQAAVKLGDLKRAIELMTCMKRGGVSPGVFVYNVVIGGLCKEKRMKDAEKLFDEMLDRRV 248
Query: 163 RPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEK 222
P+ +TY ++ + + + +EA + + E ++P F+ ++ +A E+
Sbjct: 249 APNRITYNTLIDGYCKVGQLEEAFNIRERMKVEN---VEPTIITFNSLLNGLCRAQMMEE 305
Query: 223 ARKLFALMAERGVQQSTVTYNSLMSFETNYKEVS---KIYDQMQRAGLQPDVVSYALLIN 279
A+++ M G TY +L V + ++ R G+Q + ++L+N
Sbjct: 306 AQRVLEEMEVYGFVPDRFTYTTLFDGHLKCGNVDASITLSEEAVRKGVQILDYTCSILLN 365
Query: 280 AYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSP 339
A K E+A V ++ L+ G+ P +N +++ + G +++A T + M P
Sbjct: 366 ALCKEGNMEKAEEVLKKFLENGLAPVGVFFNTIVNGYCQVGDINKAYTTIEKMEAVGLRP 425
Query: 340 DICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIY 399
+ +Y +++ + +ME AEK +++ + G +PNV TY TLI GY + ++ +I
Sbjct: 426 NHVTYNSLVKKFCEMKNMEEAEKCIKKMVEKGVLPNVETYNTLIDGYGRSCLFDRCFQIL 485
Query: 400 DKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTA 459
++M G+KPN + +++ K+ + A V +M G P+ + N+L+ + A
Sbjct: 486 EEMEKKGLKPNVISYGCLINCLCKDANILEAEVILGDMVHRGVVPNAQIYNMLIDGSCIA 545
Query: 460 DERNEA 465
+ +A
Sbjct: 546 GKLKDA 551
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 92/417 (22%), Positives = 175/417 (41%), Gaps = 35/417 (8%)
Query: 101 MLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSS 160
++I K+ AEK+ M + AP+ +++ L++ Y + G+ + A I RM+
Sbjct: 222 VVIGGLCKEKRMKDAEKLFDEMLDRRVAPNRITYNTLIDGYCKVGQLEEAFNIRERMKVE 281
Query: 161 GPRPSALTYQIILKLFVEANKFKEAEEV---------------FMTLLD----------- 194
P+ +T+ +L A +EA+ V + TL D
Sbjct: 282 NVEPTIITFNSLLNGLCRAQMMEEAQRVLEEMEVYGFVPDRFTYTTLFDGHLKCGNVDAS 341
Query: 195 ---EEKSPLKPDQKM---FHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSF 248
E++ K Q + +++ K G EKA ++ E G+ V +N++++
Sbjct: 342 ITLSEEAVRKGVQILDYTCSILLNALCKEGNMEKAEEVLKKFLENGLAPVGVFFNTIVNG 401
Query: 249 ETNYKEVSKIY---DQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPT 305
+++K Y ++M+ GL+P+ V+Y L+ + + + EEA ++M++ GV P
Sbjct: 402 YCQVGDINKAYTTIEKMEAVGLRPNHVTYNSLVKKFCEMKNMEEAEKCIKKMVEKGVLPN 461
Query: 306 HKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFR 365
+ YN L+D + S + D+ + + M + P++ SY +++ +++ AE
Sbjct: 462 VETYNTLIDGYGRSCLFDRCFQILEEMEKKGLKPNVISYGCLINCLCKDANILEAEVILG 521
Query: 366 RLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNK 425
+ G VPN Y LI G L+ +D+M I P + +++ K
Sbjct: 522 DMVHRGVVPNAQIYNMLIDGSCIAGKLKDAFRFFDEMVAREIVPTLVTYNILINGLCKKG 581
Query: 426 DFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGIN 482
A E+ G D N L+S +A +A EL +P +N
Sbjct: 582 KVMEAENLASEITRKGLSFDVITYNSLISGYSSAGNVQKALELYETMKKSGIKPTLN 638
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 71/308 (23%), Positives = 143/308 (46%), Gaps = 10/308 (3%)
Query: 170 QIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFH-MMIYMYKKAGGYEKARKLFA 228
++I + + + F ++ TL +P+KP +F M++ + ++ ++ +L+
Sbjct: 81 RLIRSMLLPKSPFSSPSHLY-TLFSLSSTPMKP---LFSDMLLSICSESKMVSESAELYM 136
Query: 229 LMAERGVQQSTVTYN----SLMSFETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKA 284
LM + GV S + N SL+S + Y++ +++ ++ +GL+PD Y I A K
Sbjct: 137 LMKKDGVLPSVASLNLFLESLVSTK-RYEDTLQLFSEIVESGLRPDQFMYGKAIQAAVKL 195
Query: 285 RREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSY 344
+ A+ + M GV P YN+++ + A +F M R +P+ +Y
Sbjct: 196 GDLKRAIELMTCMKRGGVSPGVFVYNVVIGGLCKEKRMKDAEKLFDEMLDRRVAPNRITY 255
Query: 345 TTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRV 404
T++ Y +E A R+K + P +IT+ +L+ G + +E+ + ++M V
Sbjct: 256 NTLIDGYCKVGQLEEAFNIRERMKVENVEPTIITFNSLLNGLCRAQMMEEAQRVLEEMEV 315
Query: 405 NGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNE 464
G P++ +TT+ D + K + D+++ +E G +ILL+ +
Sbjct: 316 YGFVPDRFTYTTLFDGHLKCGNVDASITLSEEAVRKGVQILDYTCSILLNALCKEGNMEK 375
Query: 465 ANELLGNF 472
A E+L F
Sbjct: 376 AEEVLKKF 383
>gi|255574927|ref|XP_002528370.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223532238|gb|EEF34042.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 712
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 96/355 (27%), Positives = 181/355 (50%), Gaps = 7/355 (1%)
Query: 88 IQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRY 147
+Q + N ++F LI K G +A ++L M +KG+ P+V +HTAL++ + G
Sbjct: 290 VQMGLNPNLINFSSLINGLCKIGSIKQAFEMLEEMVRKGWKPNVYTHTALIDGLCKKGWT 349
Query: 148 KNAEAIFRRM-QSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKM 206
+ A +F ++ +S +P+ TY ++ + + K AE M L+ ++ L P+
Sbjct: 350 EKAFRLFLKLVRSDNYKPNVYTYTCMINGYCKEEKLNRAE---MLLIRMKEQGLVPNTNT 406
Query: 207 FHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSL---MSFETNYKEVSKIYDQMQ 263
+ +I + KAG + +A +L LM + G + TYN++ + + + E K+ +
Sbjct: 407 YTCLIDGHCKAGNFGRAYELMDLMGKEGFTPNIFTYNAIIDGLCKKGRFPEAYKLLRRGL 466
Query: 264 RAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVD 323
++GL D V+Y +LI+ + + ++ALA+F M G++P YN+L+ F V+
Sbjct: 467 KSGLHADKVTYTILISEFCRQTDNKQALAIFSRMFKVGLQPDMHTYNVLIATFCRQKKVE 526
Query: 324 QARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLI 383
++ +F+ P +YT+M+ Y + A KFF +++ G P+ ITYG LI
Sbjct: 527 ESEKLFEEAVGLGLLPTKETYTSMICGYCRDGHISSAIKFFHKMRDYGCKPDSITYGALI 586
Query: 384 KGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEME 438
G + L++ ++Y+ M NG+ P + T+ Y K D +A++ + +E
Sbjct: 587 SGLCNESKLDEACQLYETMIDNGLSPCEVTRVTLAYEYCKQGDSATAMIILERLE 641
Score = 118 bits (295), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 88/365 (24%), Positives = 154/365 (42%), Gaps = 9/365 (2%)
Query: 96 EMDFLMLITAYGKQGDFNKAEKVL--SFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAI 153
+ F + + K F + V +F+N + ++ ++ G+ K A +
Sbjct: 121 SLSFFNWVIGFSKFRHFMRLYIVCATTFLNNDNLDRATEVMQCMVRSFSEIGKLKEAVNM 180
Query: 154 FRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYM 213
MQ+ G A ++ + + AE+VF +LD + PD + +M+
Sbjct: 181 VIEMQNHGLVLKARILNFVIDVALALGFVDYAEKVFDEMLDR---AVVPDSTSYKLMVVG 237
Query: 214 YKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSKIYDQMQR---AGLQPD 270
Y + G + M ERG T ++S + V++ + ++ GL P+
Sbjct: 238 YCRMGRISDVDRWLKDMIERGYAVDNATCTLMISTFSEKGFVNRAFWYFKKWVQMGLNPN 297
Query: 271 VVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQA-RTVF 329
+++++ LIN K ++A + EEM+ G +P + L+D G ++A R
Sbjct: 298 LINFSSLINGLCKIGSIKQAFEMLEEMVRKGWKPNVYTHTALIDGLCKKGWTEKAFRLFL 357
Query: 330 KCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKV 389
K +R D P++ +YT M++ Y + AE R+K+ G VPN TY LI G+ K
Sbjct: 358 KLVRSDNYKPNVYTYTCMINGYCKEEKLNRAEMLLIRMKEQGLVPNTNTYTCLIDGHCKA 417
Query: 390 NNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAK 449
N + E+ D M G PN + I+D K F A + G D+
Sbjct: 418 GNFGRAYELMDLMGKEGFTPNIFTYNAIIDGLCKKGRFPEAYKLLRRGLKSGLHADKVTY 477
Query: 450 NILLS 454
IL+S
Sbjct: 478 TILIS 482
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 81/375 (21%), Positives = 170/375 (45%), Gaps = 13/375 (3%)
Query: 101 MLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSS 160
+++ Y + G + ++ L M ++GYA + T ++ + G A F++
Sbjct: 233 LMVVGYCRMGRISDVDRWLKDMIERGYAVDNATCTLMISTFSEKGFVNRAFWYFKKWVQM 292
Query: 161 GPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGY 220
G P+ + + ++ + K+A E+ ++ + KP+ +I K G
Sbjct: 293 GLNPNLINFSSLINGLCKIGSIKQAFEMLEEMV---RKGWKPNVYTHTALIDGLCKKGWT 349
Query: 221 EKARKLFA-LMAERGVQQSTVTYNSLMSFETNYKEVSK---IYDQMQRAGLQPDVVSYAL 276
EKA +LF L+ + + TY +++ +++++ + +M+ GL P+ +Y
Sbjct: 350 EKAFRLFLKLVRSDNYKPNVYTYTCMINGYCKEEKLNRAEMLLIRMKEQGLVPNTNTYTC 409
Query: 277 LINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDR 336
LI+ + KA A + + M G P YN ++D G +A +K +RR
Sbjct: 410 LIDGHCKAGNFGRAYELMDLMGKEGFTPNIFTYNAIIDGLCKKGRFPEA---YKLLRRGL 466
Query: 337 CS---PDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLE 393
S D +YT ++S + +D + A F R+ + G P++ TY LI + + +E
Sbjct: 467 KSGLHADKVTYTILISEFCRQTDNKQALAIFSRMFKVGLQPDMHTYNVLIATFCRQKKVE 526
Query: 394 KMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILL 453
+ +++++ G+ P + +T+++ Y ++ SA+ ++ +M G PD L+
Sbjct: 527 ESEKLFEEAVGLGLLPTKETYTSMICGYCRDGHISSAIKFFHKMRDYGCKPDSITYGALI 586
Query: 454 SLAKTADERNEANEL 468
S + +EA +L
Sbjct: 587 SGLCNESKLDEACQL 601
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/226 (22%), Positives = 102/226 (45%), Gaps = 1/226 (0%)
Query: 257 KIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAF 316
K++D+M + PD SY L++ Y + R + ++M++ G + +++ F
Sbjct: 214 KVFDEMLDRAVVPDSTSYKLMVVGYCRMGRISDVDRWLKDMIERGYAVDNATCTLMISTF 273
Query: 317 AISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNV 376
+ G V++A FK + +P++ +++++++ ++ A + + + G+ PNV
Sbjct: 274 SEKGFVNRAFWYFKKWVQMGLNPNLINFSSLINGLCKIGSIKQAFEMLEEMVRKGWKPNV 333
Query: 377 ITYGTLIKGYAKVNNLEKMMEIYDKM-RVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYK 435
T+ LI G K EK ++ K+ R + KPN +T +++ Y K + + A +
Sbjct: 334 YTHTALIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVYTYTCMINGYCKEEKLNRAEMLLI 393
Query: 436 EMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGI 481
M+ G P+ L+ A A EL+ P I
Sbjct: 394 RMKEQGLVPNTNTYTCLIDGHCKAGNFGRAYELMDLMGKEGFTPNI 439
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/238 (23%), Positives = 101/238 (42%), Gaps = 1/238 (0%)
Query: 253 KEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNIL 312
KE + +MQ GL +I+ + A VF+EMLD V P +Y ++
Sbjct: 175 KEAVNMVIEMQNHGLVLKARILNFVIDVALALGFVDYAEKVFDEMLDRAVVPDSTSYKLM 234
Query: 313 LDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGF 372
+ + G + K M + D + T M+S + + A +F++ Q G
Sbjct: 235 VVGYCRMGRISDVDRWLKDMIERGYAVDNATCTLMISTFSEKGFVNRAFWYFKKWVQMGL 294
Query: 373 VPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAV- 431
PN+I + +LI G K+ ++++ E+ ++M G KPN T ++D K + A
Sbjct: 295 NPNLINFSSLINGLCKIGSIKQAFEMLEEMVRKGWKPNVYTHTALIDGLCKKGWTEKAFR 354
Query: 432 VWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGINGLSISVD 489
++ K + S + P+ +++ ++ N A LL P N + +D
Sbjct: 355 LFLKLVRSDNYKPNVYTYTCMINGYCKEEKLNRAEMLLIRMKEQGLVPNTNTYTCLID 412
>gi|110740599|dbj|BAE98404.1| hypothetical protein [Arabidopsis thaliana]
Length = 546
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 103/418 (24%), Positives = 198/418 (47%), Gaps = 44/418 (10%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
LI + D++KA + S + + G P +V++ +++ YG+ ++ A + + M +G
Sbjct: 99 LIELSRRLCDYSKAISIFSRLKRSGITPDLVAYNSMINVYGKAKLFREARLLIKEMNEAG 158
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
P+ ++Y +L ++VE +KF EA VF + E L D ++MI +Y + +
Sbjct: 159 VLPNTVSYSTLLSVYVENHKFLEALSVFAEM-KEVNCAL--DLTTCNIMIDVYGQLDMVK 215
Query: 222 KARKLFALMAERGVQQSTVTYNSLMSFETN---YKEVSKIYDQMQRAGLQPDVVSYALLI 278
+A +LF + + ++ + V+YN+++ + E ++ MQR ++ +VV+Y +I
Sbjct: 216 EADRLFWSLRKMDIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKDIEQNVVTYNTMI 275
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCS 338
YGK E+A + +EM G+ P Y+ ++ + +G +D+A T+F+ +R
Sbjct: 276 KIYGKTMEHEKATNLVQEMQSRGIEPNAITYSTIISIWGKAGKLDRAATLFQKLRSSGVE 335
Query: 339 PDICSYTTMLSAY-------------------------------VNASDMEGAEKFFRRL 367
D Y TM+ AY A E A FR+
Sbjct: 336 IDQVLYQTMIVAYERVGLMGHAKRLLHELKLPDNIPRETAITILAKAGRTEEATWVFRQA 395
Query: 368 KQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDF 427
+ G V ++ +G +I Y++ ++E+++KMR G P+ + +++AYGK ++F
Sbjct: 396 FESGEVKDISVFGCMINLYSRNQRYVNVIEVFEKMRTAGYFPDSNVIAMVLNAYGKQREF 455
Query: 428 DSAVVWYKEM--ESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGING 483
+ A Y+EM E C FP + + +LSL + + L F ++P +N
Sbjct: 456 EKADTVYREMQEEGCVFPDEVHFQ--MLSLYSSKKDFEMVESL---FQRLESDPNVNS 508
Score = 152 bits (383), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 97/380 (25%), Positives = 178/380 (46%), Gaps = 7/380 (1%)
Query: 111 DFNKAEKVLSFMNKKG-YAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTY 169
D+ ++ +L +++++ Y PSV ++ ++ R ++ A +F M+ P TY
Sbjct: 2 DWQRSLALLDWVHEEAKYTPSVFAYNVVLRNVLRAKQFDIAHGLFDEMRQRALAPDRYTY 61
Query: 170 QIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFAL 229
++ F + F A L E+ + D ++ +I + ++ Y KA +F+
Sbjct: 62 STLITSFGKEGMFDSA---LSWLQKMEQDRVSGDLVLYSNLIELSRRLCDYSKAISIFSR 118
Query: 230 MAERGVQQSTVTYNSLMSFETN---YKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARR 286
+ G+ V YNS+++ ++E + +M AG+ P+ VSY+ L++ Y + +
Sbjct: 119 LKRSGITPDLVAYNSMINVYGKAKLFREARLLIKEMNEAGVLPNTVSYSTLLSVYVENHK 178
Query: 287 EEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTT 346
EAL+VF EM + NI++D + MV +A +F +R+ P++ SY T
Sbjct: 179 FLEALSVFAEMKEVNCALDLTTCNIMIDVYGQLDMVKEADRLFWSLRKMDIEPNVVSYNT 238
Query: 347 MLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNG 406
+L Y A A FR +++ NV+TY T+IK Y K EK + +M+ G
Sbjct: 239 ILRVYGEAELFGEAIHLFRLMQRKDIEQNVVTYNTMIKIYGKTMEHEKATNLVQEMQSRG 298
Query: 407 IKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEAN 466
I+PN ++TI+ +GK D A ++++ S G DQ ++ + A
Sbjct: 299 IEPNAITYSTIISIWGKAGKLDRAATLFQKLRSSGVEIDQVLYQTMIVAYERVGLMGHAK 358
Query: 467 ELLGNFNHPNNEPGINGLSI 486
LL P+N P ++I
Sbjct: 359 RLLHELKLPDNIPRETAITI 378
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 83/329 (25%), Positives = 158/329 (48%), Gaps = 16/329 (4%)
Query: 91 WWDFNEMD-------FLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGR 143
+W +MD + ++ YG+ F +A + M +K +VV++ +++ YG+
Sbjct: 221 FWSLRKMDIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKDIEQNVVTYNTMIKIYGK 280
Query: 144 GGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPD 203
++ A + + MQS G P+A+TY I+ ++ +A K A +F L S ++ D
Sbjct: 281 TMEHEKATNLVQEMQSRGIEPNAITYSTIISIWGKAGKLDRAATLFQKL---RSSGVEID 337
Query: 204 QKMFHMMIYMYKKAGGYEKARKLFA-LMAERGVQQSTVTYNSLMSFETNYKEVSKIYDQM 262
Q ++ MI Y++ G A++L L + + T ++++ +E + ++ Q
Sbjct: 338 QVLYQTMIVAYERVGLMGHAKRLLHELKLPDNIPRETAI--TILAKAGRTEEATWVFRQA 395
Query: 263 QRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMV 322
+G D+ + +IN Y + +R + VFE+M AG P ++L+A+
Sbjct: 396 FESGEVKDISVFGCMINLYSRNQRYVNVIEVFEKMRTAGYFPDSNVIAMVLNAYGKQREF 455
Query: 323 DQARTVFKCMRRDRCS-PDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGT 381
++A TV++ M+ + C PD + MLS Y + D E E F+RL+ D V + +
Sbjct: 456 EKADTVYREMQEEGCVFPDEVHF-QMLSLYSSKKDFEMVESLFQRLESDPNVNSKELHLV 514
Query: 382 LIKGYAKVNNLEKMMEIYDKMRVNGI-KP 409
+ Y + + L + ++MR GI KP
Sbjct: 515 VAALYERADKLNDASRVMNRMRERGILKP 543
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 45/191 (23%), Positives = 95/191 (49%)
Query: 299 DAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDME 358
+A P+ AYN++L + D A +F MR+ +PD +Y+T+++++ +
Sbjct: 16 EAKYTPSVFAYNVVLRNVLRAKQFDIAHGLFDEMRQRALAPDRYTYSTLITSFGKEGMFD 75
Query: 359 GAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIM 418
A + ++++QD +++ Y LI+ ++ + K + I+ +++ +GI P+ + +++
Sbjct: 76 SALSWLQKMEQDRVSGDLVLYSNLIELSRRLCDYSKAISIFSRLKRSGITPDLVAYNSMI 135
Query: 419 DAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNE 478
+ YGK K F A + KEM G P+ + + LLS+ + EA + N
Sbjct: 136 NVYGKAKLFREARLLIKEMNEAGVLPNTVSYSTLLSVYVENHKFLEALSVFAEMKEVNCA 195
Query: 479 PGINGLSISVD 489
+ +I +D
Sbjct: 196 LDLTTCNIMID 206
>gi|449462479|ref|XP_004148968.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
mitochondrial-like [Cucumis sativus]
Length = 580
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 113/428 (26%), Positives = 191/428 (44%), Gaps = 16/428 (3%)
Query: 88 IQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRY 147
++ + N + + LI + ++A ++ M K G P VV++ L++ G
Sbjct: 131 LRRGYSPNIVTYNTLIKGLCMEHRISEATRLFLRMQKLGCTPDVVTYGTLIKGLCGTGNI 190
Query: 148 KNAEAIFRRMQSSGPR------PSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSP-- 199
A + + M + R P+ +TY II+ + + EA+++F + + P
Sbjct: 191 NIALKLHQEMLNDISRYEINCKPNVITYNIIVDGLCKVGREDEAKQLFEEMKTQGMIPNE 250
Query: 200 -----LKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLM---SFETN 251
L+PD F+++I K G +A+KL +M E G+ VTYNSL+ +
Sbjct: 251 MLDQGLQPDMVTFNVLIDTLCKEGKVIEAKKLLGVMIESGIVPDLVTYNSLIEGFCMVGD 310
Query: 252 YKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNI 311
+++ M G +PDV+SY +LIN Y K + EEA+ ++ EML G RP Y+
Sbjct: 311 LNSARELFVSMPSKGCEPDVISYNVLINGYSKTLKVEEAMKLYNEMLLVGKRPNVITYDS 370
Query: 312 LLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDG 371
LL ++G VD A+ +F M+ + + +Y L + A K F LK
Sbjct: 371 LLKGIFLAGKVDDAKKLFSVMKAHGIAENSYTYGIFLDGLCKNDCLFEAMKLFTELKSSN 430
Query: 372 FVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAV 431
F + LI G K LE E+++K+ G +PN +T ++ + + D A
Sbjct: 431 FKLEIENLNCLIDGLCKAGKLETAWELFEKLSNEGHEPNVVTYTIMIHGFCREGQVDKAN 490
Query: 432 VWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGINGLSISVDEE 491
V ++ME+ G PD N L+ +++ E +LL + P SI VD
Sbjct: 491 VLIQKMEANGCTPDIITYNTLMRGFYESNKLEEVVQLLHRMAQKDVSPDAITCSIVVDML 550
Query: 492 DDDDDDDE 499
D+ E
Sbjct: 551 SKDEKYQE 558
Score = 119 bits (298), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 98/426 (23%), Positives = 165/426 (38%), Gaps = 59/426 (13%)
Query: 120 SFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAI--FRRMQSSGPRPSALTYQIILKLFV 177
S PS A + + G A+ F M S P PS ++ +L
Sbjct: 21 SLFTHSSAIPSPNPQIAFFLRHCKTGNVTATHALHFFHLMMRSTPTPSLSSFNHLLSGLA 80
Query: 178 EANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQ 237
K K +VF S L D+ ++++ + FA + RG
Sbjct: 81 ---KIKHYSQVFSLYNQMRLSGLSSDRCTLNILLNCLCNVNRLREGFAAFAGILRRGYSP 137
Query: 238 STVTYNSL---MSFETNYKEVSKIYDQMQRAGLQPDVVSYALLI---------------- 278
+ VTYN+L + E E ++++ +MQ+ G PDVV+Y LI
Sbjct: 138 NIVTYNTLIKGLCMEHRISEATRLFLRMQKLGCTPDVVTYGTLIKGLCGTGNINIALKLH 197
Query: 279 -------------------------NAYGKARREEEALAVFE----------EMLDAGVR 303
+ K RE+EA +FE EMLD G++
Sbjct: 198 QEMLNDISRYEINCKPNVITYNIIVDGLCKVGREDEAKQLFEEMKTQGMIPNEMLDQGLQ 257
Query: 304 PTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKF 363
P +N+L+D G V +A+ + M PD+ +Y +++ + D+ A +
Sbjct: 258 PDMVTFNVLIDTLCKEGKVIEAKKLLGVMIESGIVPDLVTYNSLIEGFCMVGDLNSAREL 317
Query: 364 FRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGK 423
F + G P+VI+Y LI GY+K +E+ M++Y++M + G +PN + +++
Sbjct: 318 FVSMPSKGCEPDVISYNVLINGYSKTLKVEEAMKLYNEMLLVGKRPNVITYDSLLKGIFL 377
Query: 424 NKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGING 483
D A + M++ G + I L D EA +L N + I
Sbjct: 378 AGKVDDAKKLFSVMKAHGIAENSYTYGIFLDGLCKNDCLFEAMKLFTELKSSNFKLEIEN 437
Query: 484 LSISVD 489
L+ +D
Sbjct: 438 LNCLID 443
Score = 43.9 bits (102), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 32/176 (18%), Positives = 72/176 (40%), Gaps = 38/176 (21%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
LI K G A ++ ++ +G+ P+VV++T ++ + R G+ A + ++M+++G
Sbjct: 441 LIDGLCKAGKLETAWELFEKLSNEGHEPNVVTYTIMIHGFCREGQVDKANVLIQKMEANG 500
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
P +TY +++ F E+NK +E +
Sbjct: 501 CTPDIITYNTLMRGFYESNKLEEVVQ---------------------------------- 526
Query: 222 KARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSKIYDQMQRAGLQPDVVSYALL 277
L MA++ V +T + ++ + ++ + + R +Q V + L+
Sbjct: 527 ----LLHRMAQKDVSPDAITCSIVVDMLSKDEKYQECLHLLPRFPIQKGVDKHLLM 578
>gi|224111844|ref|XP_002316000.1| predicted protein [Populus trichocarpa]
gi|222865040|gb|EEF02171.1| predicted protein [Populus trichocarpa]
Length = 745
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 114/454 (25%), Positives = 205/454 (45%), Gaps = 47/454 (10%)
Query: 97 MDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRR 156
+ F +++ Y K G + A+ M K G P S+ L+ G + A +
Sbjct: 186 VSFNTIMSRYCKLGLADVAKSFFCMMLKYGILPDTYSYNILIHGLIVAGSMEEALELTND 245
Query: 157 MQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKK 216
M+ G +P +TY+I+ K F A E+ +L +E LKPD + ++I + +
Sbjct: 246 MEKQGLQPDMVTYKIVAKGFHLLGLMSGAREIIQKMLTDEG--LKPDLVTYTVLICGHCQ 303
Query: 217 AGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVS---KIYDQMQRAGLQPDVVS 273
G E+A +L + G Q + + Y+ L+S +V ++ +M+ LQPD+V+
Sbjct: 304 MGNIEEALRLRRDLLSSGFQLNVILYSVLLSSLCKRGQVDEALQLLYEMEANNLQPDLVT 363
Query: 274 YALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMR 333
Y++LI+ K + ++A+ +++EM + P A++ +L GM+ AR F +
Sbjct: 364 YSILIHGLCKQGKVQQAIQLYKEMCFNRIFPNSFAHSGILKGLCEKGMLSDARMYFDSLI 423
Query: 334 RDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLE 393
PD+ Y M+ YV D+E A + ++RL+ P+++T+ +LI G+ K +
Sbjct: 424 MSNLRPDVTLYNIMIDGYVKLGDVEEAVRLYKRLRDKAITPSIVTFNSLIYGFCKNRKVV 483
Query: 394 KMMEIYDKMRVNGIKPNQTIFTTIMDAYGKN---------------KDFDSAVVWY---- 434
+ + + ++++G++P+ +TT+M+AY + KD + VV Y
Sbjct: 484 EARRLLESIKLHGLEPSAVTYTTLMNAYCEEGNINKLHELLLEMNLKDIEPTVVTYTVVI 543
Query: 435 ----------------KEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNE 478
++M + G PDQ N ++ A + +A ELL + N E
Sbjct: 544 KGLCKQRKLEESVQLLEDMRAKGLAPDQITYNTIIQCFCKAKDMRKAFELLDDMLIHNLE 603
Query: 479 PG-------INGLSISVDEEDDDDDDDEDDDDNI 505
P I+GL D ED D D NI
Sbjct: 604 PTPATYNVLIDGLCRYGDVEDADRVLVSLQDRNI 637
Score = 118 bits (296), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 98/453 (21%), Positives = 201/453 (44%), Gaps = 44/453 (9%)
Query: 58 LPKDLVLGTLVRLKQLKKWNVVSEVLEWLR--IQSWWDFNEMDFLMLITAYGKQGDFNKA 115
L DLV T++ + N+ E L R + S + N + + +L+++ K+G ++A
Sbjct: 287 LKPDLVTYTVLICGHCQMGNI-EEALRLRRDLLSSGFQLNVILYSVLLSSLCKRGQVDEA 345
Query: 116 EKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKL 175
++L M P +V+++ L+ + G+ + A +++ M + P++ + ILK
Sbjct: 346 LQLLYEMEANNLQPDLVTYSILIHGLCKQGKVQQAIQLYKEMCFNRIFPNSFAHSGILKG 405
Query: 176 FVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGV 235
E +A F +L+ S L+PD ++++MI Y K G E+A +L+ + ++ +
Sbjct: 406 LCEKGMLSDARMYFDSLI---MSNLRPDVTLYNIMIDGYVKLGDVEEAVRLYKRLRDKAI 462
Query: 236 QQSTVTYNSLM-SFETNYK--EVSKIYDQMQRAGLQPD---------------------- 270
S VT+NSL+ F N K E ++ + ++ GL+P
Sbjct: 463 TPSIVTFNSLIYGFCKNRKVVEARRLLESIKLHGLEPSAVTYTTLMNAYCEEGNINKLHE 522
Query: 271 -------------VVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFA 317
VV+Y ++I K R+ EE++ + E+M G+ P YN ++ F
Sbjct: 523 LLLEMNLKDIEPTVVTYTVVIKGLCKQRKLEESVQLLEDMRAKGLAPDQITYNTIIQCFC 582
Query: 318 ISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVI 377
+ + +A + M P +Y ++ D+E A++ L+ +
Sbjct: 583 KAKDMRKAFELLDDMLIHNLEPTPATYNVLIDGLCRYGDVEDADRVLVSLQDRNINLTKV 642
Query: 378 TYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEM 437
Y T+IK + + ++ ++++ +M G + + ++ +++ K + A ++ M
Sbjct: 643 AYTTMIKAHCVKGDAQRAVKVFHQMVEKGFEVSIKDYSAVINRLCKRCLINEAKYYFCIM 702
Query: 438 ESCGFPPDQKAKNILLSLAKTADERNEANELLG 470
S G PDQ+ ++L+ A + ELL
Sbjct: 703 LSDGVSPDQEIFEMMLNAFHRAGHVHSVFELLA 735
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/266 (22%), Positives = 126/266 (47%), Gaps = 3/266 (1%)
Query: 226 LFAL--MAERGVQQSTVTYNSLMSFETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGK 283
LF L M E+ ++ S TYNSL+ + + +Y+ ++ +G + +++++
Sbjct: 103 LFVLVKMKEQNLRPSIQTYNSLLYNLRHTDIMWDVYNDIKDSGTPQSARTSSIIVDGLCG 162
Query: 284 ARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICS 343
R +A+ + P+ ++N ++ + G+ D A++ F M + PD S
Sbjct: 163 QSRFRDAVLFLRQNDGKEFAPSVVSFNTIMSRYCKLGLADVAKSFFCMMLKYGILPDTYS 222
Query: 344 YTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMR 403
Y ++ + A ME A + +++ G P+++TY + KG+ + + EI KM
Sbjct: 223 YNILIHGLIVAGSMEEALELTNDMEKQGLQPDMVTYKIVAKGFHLLGLMSGAREIIQKML 282
Query: 404 VN-GIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADER 462
+ G+KP+ +T ++ + + + + A+ +++ S GF + ++LLS +
Sbjct: 283 TDEGLKPDLVTYTVLICGHCQMGNIEEALRLRRDLLSSGFQLNVILYSVLLSSLCKRGQV 342
Query: 463 NEANELLGNFNHPNNEPGINGLSISV 488
+EA +LL N +P + SI +
Sbjct: 343 DEALQLLYEMEANNLQPDLVTYSILI 368
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/239 (19%), Positives = 105/239 (43%), Gaps = 41/239 (17%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
L+ AY ++G+ NK ++L MN K P+VV++T +++ + + + + + M++ G
Sbjct: 507 LMNAYCEEGNINKLHELLLEMNLKDIEPTVVTYTVVIKGLCKQRKLEESVQLLEDMRAKG 566
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
P +TY I++ F +A ++A E+ +L L+P ++++I + G E
Sbjct: 567 LAPDQITYNTIIQCFCKAKDMRKAFELLDDMLIHN---LEPTPATYNVLIDGLCRYGDVE 623
Query: 222 KARKLFALMAERGVQQSTVTYNSLM----------------------SFETNYKEVSKIY 259
A ++ + +R + + V Y +++ FE + K+ S +
Sbjct: 624 DADRVLVSLQDRNINLTKVAYTTMIKAHCVKGDAQRAVKVFHQMVEKGFEVSIKDYSAVI 683
Query: 260 DQMQRA----------------GLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGV 302
+++ + G+ PD + +++NA+ +A + M+ G+
Sbjct: 684 NRLCKRCLINEAKYYFCIMLSDGVSPDQEIFEMMLNAFHRAGHVHSVFELLAVMIKFGL 742
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/135 (25%), Positives = 65/135 (48%), Gaps = 3/135 (2%)
Query: 101 MLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSS 160
+LI + GD A++VL + + + V++T +++A+ G + A +F +M
Sbjct: 611 VLIDGLCRYGDVEDADRVLVSLQDRNINLTKVAYTTMIKAHCVKGDAQRAVKVFHQMVEK 670
Query: 161 GPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGY 220
G S Y ++ + EA+ F +L + SP DQ++F MM+ + +AG
Sbjct: 671 GFEVSIKDYSAVINRLCKRCLINEAKYYFCIMLSDGVSP---DQEIFEMMLNAFHRAGHV 727
Query: 221 EKARKLFALMAERGV 235
+L A+M + G+
Sbjct: 728 HSVFELLAVMIKFGL 742
>gi|83744086|gb|ABC42329.1| PPR protein [Oryza sativa Indica Group]
Length = 761
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 101/366 (27%), Positives = 172/366 (46%), Gaps = 13/366 (3%)
Query: 97 MDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRR 156
+ + +I + K+GD KA M + +P VV++++++ A +G A +
Sbjct: 197 VSYTTVINGFFKEGDSGKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEVLTS 256
Query: 157 MQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSP--LKPDQKMFHMMIYMY 214
M +G P+ TY I+ + + + KEA + + P L+PD + ++ Y
Sbjct: 257 MVKNGVMPNCRTYTSIMHGYCSSGQPKEAIGFLKKVRSDGVEPDGLEPDIATYCTLLQGY 316
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSLMSF---ETNYKEVSKIYDQMQRAGLQPDV 271
G L LM G+ YN L+ + E ++ +M++ GL PD
Sbjct: 317 ATKGALVGMHALLDLMVRNGIHPDHYVYNILICAYAKQGKVDEAMLVFSKMRQQGLNPDA 376
Query: 272 VSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKC 331
V+Y +I K+ R E+A+ FE+M+D G+ P + YN L+ ++A +
Sbjct: 377 VTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILE 436
Query: 332 MRRDRCSPDICSYTTMLSAYVNASDMEG----AEKFFRRLKQDGFVPNVITYGTLIKGYA 387
M DR IC T ++ +++ EG +EK F + + G P++ITY TLI GY
Sbjct: 437 M-LDR---GICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYC 492
Query: 388 KVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQK 447
+++ M++ M G+KPN + T+++ Y K A+V +KEMES G PD
Sbjct: 493 LAGKMDEAMKLLSGMVSVGLKPNTVTYRTLINGYCKISRMGDALVLFKEMESSGVSPDII 552
Query: 448 AKNILL 453
NI+L
Sbjct: 553 TYNIIL 558
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 96/361 (26%), Positives = 170/361 (47%), Gaps = 13/361 (3%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
+I A K +KA +VL+ M K G P+ ++T++M Y G+ K A ++++S G
Sbjct: 237 IIAALCKGQAMDKAMEVLTSMVKNGVMPNCRTYTSIMHGYCSSGQPKEAIGFLKKVRSDG 296
Query: 162 PRPSAL-----TYQIILKLFVEANKFKEAEEVFMTLLD-EEKSPLKPDQKMFHMMIYMYK 215
P L TY +L+ + K A LLD ++ + PD +++++I Y
Sbjct: 297 VEPDGLEPDIATYCTLLQGYAT----KGALVGMHALLDLMVRNGIHPDHYVYNILICAYA 352
Query: 216 KAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSKI---YDQMQRAGLQPDVV 272
K G ++A +F+ M ++G+ VTY +++ V ++QM GL P +
Sbjct: 353 KQGKVDEAMLVFSKMRQQGLNPDAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNI 412
Query: 273 SYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCM 332
Y LI+ + E A + EMLD G+ +N ++D+ G V ++ +F M
Sbjct: 413 VYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLM 472
Query: 333 RRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNL 392
R PDI +Y+T++ Y A M+ A K + G PN +TY TLI GY K++ +
Sbjct: 473 VRIGVKPDIITYSTLIDGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYRTLINGYCKISRM 532
Query: 393 EKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNIL 452
+ ++ +M +G+ P+ + I+ + + +A Y + G + NI+
Sbjct: 533 GDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNII 592
Query: 453 L 453
L
Sbjct: 593 L 593
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 82/350 (23%), Positives = 162/350 (46%), Gaps = 6/350 (1%)
Query: 99 FLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQ 158
+ L+ Y +G +L M + G P + L+ AY + G+ A +F +M+
Sbjct: 309 YCTLLQGYATKGALVGMHALLDLMVRNGIHPDHYVYNILICAYAKQGKVDEAMLVFSKMR 368
Query: 159 SSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAG 218
G P A+TY ++ + ++ + ++A F ++DE L P +++ +I+
Sbjct: 369 QQGLNPDAVTYGAVIGILCKSGRVEDAMLYFEQMIDE---GLSPGNIVYNSLIHGLCTCN 425
Query: 219 GYEKARKLFALMAERGVQQSTVTYNSLM---SFETNYKEVSKIYDQMQRAGLQPDVVSYA 275
+E+A +L M +RG+ +T+ +NS++ E E K++D M R G++PD+++Y+
Sbjct: 426 KWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYS 485
Query: 276 LLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRD 335
LI+ Y A + +EA+ + M+ G++P Y L++ + + A +FK M
Sbjct: 486 TLIDGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYRTLINGYCKISRMGDALVLFKEMESS 545
Query: 336 RCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKM 395
SPDI +Y +L A++ + R+ + G + TY ++ G K +
Sbjct: 546 GVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDA 605
Query: 396 MEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPD 445
+ ++ + + +K F ++DA K A + S G P+
Sbjct: 606 LRMFQNLCLMDLKLEARTFNIMIDALLKVGRNGEAKDLFVAFSSNGLVPN 655
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 95/373 (25%), Positives = 161/373 (43%), Gaps = 14/373 (3%)
Query: 118 VLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRM---QSSGPRPSALTYQIILK 174
VL M + P V S T L++ R + A + M + G P ++Y ++
Sbjct: 145 VLRRMTELSCMPDVFSCTILLKGLCDENRSQEALELPHMMADGRGGGSAPDVVSYTTVIN 204
Query: 175 LFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERG 234
F + +A + +LD SP D + +I K +KA ++ M + G
Sbjct: 205 GFFKEGDSGKAYSTYHEMLDRRISP---DVVTYSSIIAALCKGQAMDKAMEVLTSMVKNG 261
Query: 235 VQQSTVTYNSLMSFETNYKE-------VSKI-YDQMQRAGLQPDVVSYALLINAYGKARR 286
V + TY S+M + + + K+ D ++ GL+PD+ +Y L+ Y
Sbjct: 262 VMPNCRTYTSIMHGYCSSGQPKEAIGFLKKVRSDGVEPDGLEPDIATYCTLLQGYATKGA 321
Query: 287 EEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTT 346
A+ + M+ G+ P H YNIL+ A+A G VD+A VF MR+ +PD +Y
Sbjct: 322 LVGMHALLDLMVRNGIHPDHYVYNILICAYAKQGKVDEAMLVFSKMRQQGLNPDAVTYGA 381
Query: 347 MLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNG 406
++ + +E A +F ++ +G P I Y +LI G N E+ E+ +M G
Sbjct: 382 VIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRG 441
Query: 407 IKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEAN 466
I N F +I+D++ K + + M G PD + L+ A + +EA
Sbjct: 442 ICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEAM 501
Query: 467 ELLGNFNHPNNEP 479
+LL +P
Sbjct: 502 KLLSGMVSVGLKP 514
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 91/356 (25%), Positives = 156/356 (43%), Gaps = 41/356 (11%)
Query: 101 MLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSS 160
+LI AY KQG ++A V S M ++G P V++ A++ + GR ++A F +M
Sbjct: 346 ILICAYAKQGKVDEAMLVFSKMRQQGLNPDAVTYGAVIGILCKSGRVEDAMLYFEQMIDE 405
Query: 161 GPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGY 220
G P + Y ++ NK++ AEE+ + +LD + + F+ +I + K G
Sbjct: 406 GLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDR---GICLNTIFFNSIIDSHCKEGRV 462
Query: 221 EKARKLFALMAERGVQQSTVTYNSLM---SFETNYKEVSKIYDQMQRAGLQPDVVSYALL 277
++ KLF LM GV+ +TY++L+ E K+ M GL+P+ V+Y L
Sbjct: 463 IESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYRTL 522
Query: 278 INAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFK------- 330
IN Y K R +AL +F+EM +GV P YNI+L + A+ ++
Sbjct: 523 INGYCKISRMGDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGT 582
Query: 331 --------------C----------MRRDRCSPDIC----SYTTMLSAYVNASDMEGAEK 362
C M ++ C D+ ++ M+ A + A+
Sbjct: 583 QIELSTYNIILHGLCKNKLTDDALRMFQNLCLMDLKLEARTFNIMIDALLKVGRNGEAKD 642
Query: 363 FFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIM 418
F +G VPN TY + + LE++ +++ M NG + + I+
Sbjct: 643 LFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIV 698
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 80/352 (22%), Positives = 154/352 (43%), Gaps = 13/352 (3%)
Query: 129 PSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEV 188
P+V ++ L+ R R A + G R A+T+ +LK + +A ++
Sbjct: 85 PTVHTYAILIGCCCRADRLDLGFAALGNVVKKGFRVEAITFTPLLKGLCADKRTSDAMDI 144
Query: 189 FMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAE---RGVQQSTVTYNSL 245
+ + E PD +++ ++A +L +MA+ G V+Y ++
Sbjct: 145 VLRRMTELSC--MPDVFSCTILLKGLCDENRSQEALELPHMMADGRGGGSAPDVVSYTTV 202
Query: 246 MSF---ETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGV 302
++ E + + Y +M + PDVV+Y+ +I A K + ++A+ V M+ GV
Sbjct: 203 INGFFKEGDSGKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEVLTSMVKNGV 262
Query: 303 RPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRC-----SPDICSYTTMLSAYVNASDM 357
P + Y ++ + SG +A K +R D PDI +Y T+L Y +
Sbjct: 263 MPNCRTYTSIMHGYCSSGQPKEAIGFLKKVRSDGVEPDGLEPDIATYCTLLQGYATKGAL 322
Query: 358 EGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTI 417
G + ++G P+ Y LI YAK +++ M ++ KMR G+ P+ + +
Sbjct: 323 VGMHALLDLMVRNGIHPDHYVYNILICAYAKQGKVDEAMLVFSKMRQQGLNPDAVTYGAV 382
Query: 418 MDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELL 469
+ K+ + A++++++M G P N L+ T ++ A EL+
Sbjct: 383 IGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELI 434
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 61/287 (21%), Positives = 135/287 (47%), Gaps = 10/287 (3%)
Query: 59 PKDLVLGTLVR-LKQLKKWNVVSE-VLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAE 116
P ++V +L+ L KW E +LE L N + F +I ++ K+G ++E
Sbjct: 409 PGNIVYNSLIHGLCTCNKWERAEELILEML--DRGICLNTIFFNSIIDSHCKEGRVIESE 466
Query: 117 KVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLF 176
K+ M + G P +++++ L++ Y G+ A + M S G +P+ +TY+ ++ +
Sbjct: 467 KLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYRTLINGY 526
Query: 177 VEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQ 236
+ ++ +A +F + E S + PD +++++ + A++L+ + E G Q
Sbjct: 527 CKISRMGDALVLFKEM---ESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQ 583
Query: 237 QSTVTYNSLMSFETNYK---EVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAV 293
TYN ++ K + +++ + L+ + ++ ++I+A K R EA +
Sbjct: 584 IELSTYNIILHGLCKNKLTDDALRMFQNLCLMDLKLEARTFNIMIDALLKVGRNGEAKDL 643
Query: 294 FEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPD 340
F G+ P + Y ++ + G++++ +F M + C+ D
Sbjct: 644 FVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVD 690
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 62/268 (23%), Positives = 109/268 (40%), Gaps = 9/268 (3%)
Query: 221 EKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSKI--YDQMQRAG---LQPDVVSYA 275
E AR +F + RG S N ++ + + + Y++M RAG + P V +YA
Sbjct: 32 EDARHVFDELLRRGRGASIYGLNRALADVARHSPAAAVSRYNRMARAGAGKVTPTVHTYA 91
Query: 276 LLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQAR-TVFKCMRR 334
+LI +A R + A ++ G R + LL A V + M
Sbjct: 92 ILIGCCCRADRLDLGFAALGNVVKKGFRVEAITFTPLLKGLCADKRTSDAMDIVLRRMTE 151
Query: 335 DRCSPDICSYTTMLSAYVNASDMEGAEKFFRRL---KQDGFVPNVITYGTLIKGYAKVNN 391
C PD+ S T +L + + + A + + + G P+V++Y T+I G+ K +
Sbjct: 152 LSCMPDVFSCTILLKGLCDENRSQEALELPHMMADGRGGGSAPDVVSYTTVINGFFKEGD 211
Query: 392 LEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNI 451
K Y +M I P+ +++I+ A K + D A+ M G P+ +
Sbjct: 212 SGKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEVLTSMVKNGVMPNCRTYTS 271
Query: 452 LLSLAKTADERNEANELLGNFNHPNNEP 479
++ ++ + EA L EP
Sbjct: 272 IMHGYCSSGQPKEAIGFLKKVRSDGVEP 299
>gi|297733951|emb|CBI15198.3| unnamed protein product [Vitis vinifera]
Length = 948
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 107/408 (26%), Positives = 181/408 (44%), Gaps = 42/408 (10%)
Query: 89 QSWWDFNEMDFL-------MLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAY 141
++ W + +MD L M++ K+G F+ KV M +G +P+VV++ L++
Sbjct: 144 EALWVYYKMDVLPAMQACNMVLDGLVKKGRFDTMWKVYGDMVARGASPNVVTYGTLIDGC 203
Query: 142 GRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLK 201
R G + A +F M P+ + Y I+++ ++ EAE +F T+ S +
Sbjct: 204 CRQGDFLKAFRLFDEMIEKKIFPTVVIYTILIRGLCGESRISEAESMFRTM---RNSGML 260
Query: 202 PDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSKIYDQ 261
P+ ++ M+ Y K +KA +L Y +
Sbjct: 261 PNLYTYNTMMDGYCKIAHVKKALEL--------------------------------YQE 288
Query: 262 MQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGM 321
M GL P+VV++ +LI+ K A +M GV P YN L+D + +G
Sbjct: 289 MLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGN 348
Query: 322 VDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGT 381
+ +A ++ + + PD+ +Y+ ++ ME A+ + +K+ GF+PN +TY T
Sbjct: 349 LSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNT 408
Query: 382 LIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCG 441
LI GY K N+EK +E+ +M GI+PN F+T++D Y K ++A+ Y EM G
Sbjct: 409 LIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKG 468
Query: 442 FPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGINGLSISVD 489
PD A L+ EA L P + LS +D
Sbjct: 469 LLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCLID 516
Score = 148 bits (374), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 94/340 (27%), Positives = 163/340 (47%), Gaps = 6/340 (1%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + + LI +QGDF KA ++ M +K P+VV +T L+ R AE++F
Sbjct: 192 NVVTYGTLIDGCCRQGDFLKAFRLFDEMIEKKIFPTVVIYTILIRGLCGESRISEAESMF 251
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
R M++SG P+ TY ++ + + K+A E++ +L + L P+ F ++I
Sbjct: 252 RTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALELYQEMLGDG---LLPNVVTFGILIDGL 308
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSLM---SFETNYKEVSKIYDQMQRAGLQPDV 271
K ARK MA GV + YN L+ N E ++ ++++ + PDV
Sbjct: 309 CKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGNLSEALSLHSEIEKHEILPDV 368
Query: 272 VSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKC 331
+Y++LI R EEA + +EM G P YN L+D + G +++A V
Sbjct: 369 FTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQ 428
Query: 332 MRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNN 391
M P+I +++T++ Y A ME A + + G +P+V+ Y LI G+ K N
Sbjct: 429 MTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGN 488
Query: 392 LEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAV 431
++ ++ +M+ G+ PN + ++D K+ A+
Sbjct: 489 TKEAFRLHKEMQEAGLHPNVFTLSCLIDGLCKDGRISDAI 528
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 77/369 (20%), Positives = 156/369 (42%), Gaps = 52/369 (14%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + F LI Y K G A + + M KG P VV++TAL++ + + G K A +
Sbjct: 437 NIITFSTLIDGYCKAGKMEAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLH 496
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKP---DQKMFHMMI 211
+ MQ +G P+ T ++ + + +A ++F+ + + K D+ ++ M
Sbjct: 497 KEMQEAGLHPNVFTLSCLIDGLCKDGRISDAIKLFLAKTGTDTTGSKTNELDRSLYQMC- 555
Query: 212 YMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMS-FETNYKEVSKIY--------DQM 262
A LF RG+ + + + F TN + + ++ +Q
Sbjct: 556 ---------SLALSLF-----RGISEPCICVIRVTKLFATNNQPKAHLHTHLKPPKSNQT 601
Query: 263 QRAGLQPDVVSYALL------------INAYG-----KARREEEALAVFEEM----LDAG 301
+ LQ S LL I+++ KA + +L ++M ++ G
Sbjct: 602 LKRYLQSSNTSKVLLFFRILLRKNPSSIDSFSLMFALKACTLKSSLVEGKQMHALVINFG 661
Query: 302 VRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAE 361
P L+ ++ +G V A +F + S ++ S+T+++SAYV+ A
Sbjct: 662 FEPIIFLQTSLISMYSATGNVADAHNMFD----EIPSKNLISWTSVISAYVDNQRPNKAL 717
Query: 362 KFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAY 421
+ FR+++ D P+++T + A + L+ I+ +R G+ + + ++++ Y
Sbjct: 718 QLFRQMQMDDVQPDIVTVTVALSACADLGALDMGEWIHAYIRHRGLDTDLCLNNSLINMY 777
Query: 422 GKNKDFDSA 430
K + +A
Sbjct: 778 SKCGEIGTA 786
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 63/294 (21%), Positives = 112/294 (38%), Gaps = 70/294 (23%)
Query: 277 LINAYGKARREEEALAVFEEM--LDAGVRPTHKAYNILLDAFAISGMVDQARTVF----- 329
LI +RR +VF + L++ + T + +L+ AF+ G+V++A V+
Sbjct: 96 LIQCLQNSRRSRICCSVFNVLSRLESS-KFTPNVFGVLIIAFSEMGLVEEALWVYYKMDV 154
Query: 330 -----KC-------MRRDR---------------CSPDICSYTTMLSAYVNASD------ 356
C +++ R SP++ +Y T++ D
Sbjct: 155 LPAMQACNMVLDGLVKKGRFDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFLKAFR 214
Query: 357 -----------------------------MEGAEKFFRRLKQDGFVPNVITYGTLIKGYA 387
+ AE FR ++ G +PN+ TY T++ GY
Sbjct: 215 LFDEMIEKKIFPTVVIYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYC 274
Query: 388 KVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQK 447
K+ +++K +E+Y +M +G+ PN F ++D K + SA + +M S G P+
Sbjct: 275 KIAHVKKALELYQEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIF 334
Query: 448 AKNILLSLAKTADERNEANELLGNFNHPNNEPGINGLSISVDEEDDDDDDDEDD 501
N L+ A +EA L P + SI + D +E D
Sbjct: 335 VYNCLIDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEAD 388
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 55/281 (19%), Positives = 112/281 (39%), Gaps = 42/281 (14%)
Query: 173 LKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAE 232
LK +++++ + F LL + S + MF + K + + +++ AL+
Sbjct: 602 LKRYLQSSNTSKVLLFFRILLRKNPSSIDSFSLMFALKACTLKSS--LVEGKQMHALVIN 659
Query: 233 RGVQQSTVTYNSLMSFET---NYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEE 289
G + SL+S + N + ++D++ L +S+ +I+AY +R +
Sbjct: 660 FGFEPIIFLQTSLISMYSATGNVADAHNMFDEIPSKNL----ISWTSVISAYVDNQRPNK 715
Query: 290 ALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLS 349
AL +F +M V+P + L A A G +D + +R D+C ++++
Sbjct: 716 ALQLFRQMQMDDVQPDIVTVTVALSACADLGALDMGEWIHAYIRHRGLDTDLCLNNSLIN 775
Query: 350 AYVNASDMEGAEKF-----------------------------FRRLKQD-GFVPNVITY 379
Y ++ A +F FR +K+D P + +
Sbjct: 776 MYSKCGEIGTARRFSLVLPNDVTFMGVLMACSHAGLVEEGKQHFRSMKEDYSLRPRISHF 835
Query: 380 GTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDA 420
G ++ + L + E KM V +PN ++ T++ A
Sbjct: 836 GCMVDLLCRAGLLTEAYEFILKMPV---RPNAVVWRTLLGA 873
Score = 47.8 bits (112), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 61/265 (23%), Positives = 113/265 (42%), Gaps = 25/265 (9%)
Query: 73 LKKWNVVSEVLEWLRIQSW---WDFNEMDFLM--LITAYGKQGDFNKAEKVLSFMNKKGY 127
LK + S ++E ++ + + F + FL LI+ Y G+ A + + K
Sbjct: 638 LKACTLKSSLVEGKQMHALVINFGFEPIIFLQTSLISMYSATGNVADAHNMFDEIPSK-- 695
Query: 128 APSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEE 187
+++S T+++ AY R A +FR+MQ +P +T + L + E
Sbjct: 696 --NLISWTSVISAYVDNQRPNKALQLFRQMQMDDVQPDIVTVTVALSACADLGALDMGEW 753
Query: 188 VFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLM- 246
+ + L D + + +I MY K G AR+ F+L V + VT+ ++
Sbjct: 754 IHAYI---RHRGLDTDLCLNNSLINMYSKCGEIGTARR-FSL-----VLPNDVTFMGVLM 804
Query: 247 --SFETNYKEVSKIYDQMQR-AGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVR 303
S +E + + M+ L+P + + +++ +A EA +E +L VR
Sbjct: 805 ACSHAGLVEEGKQHFRSMKEDYSLRPRISHFGCMVDLLCRAGLLTEA---YEFILKMPVR 861
Query: 304 PTHKAYNILLDAFAISGMVDQARTV 328
P + LL A ++ GM D+ V
Sbjct: 862 PNAVVWRTLLGACSLQGMWDKKMLV 886
>gi|449449675|ref|XP_004142590.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
chloroplastic-like [Cucumis sativus]
Length = 581
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 106/402 (26%), Positives = 194/402 (48%), Gaps = 11/402 (2%)
Query: 71 KQLKKWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPS 130
+ LKK V E+LE + +N M I+ + K + A +V M +G++P
Sbjct: 111 RNLKKAMRVMEILETYGDPDVYSYNAM-----ISGFSKANQIDSANQVFDRMRSRGFSPD 165
Query: 131 VVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFM 190
VV++ ++ + G+ + A + + G +PS +TY I+++ + + EA E+F
Sbjct: 166 VVTYNIMIGSLCSRGKLELAFEVMDELLKDGCKPSVITYTILIEATILEGRINEALELFD 225
Query: 191 TLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLM-SF- 248
L+ L+PD ++ +I K G ++A ++ RG V+YN L+ SF
Sbjct: 226 ELVSRG---LRPDLYTYNAIIRGICKEGMEDRALDFVRHLSARGCNPDVVSYNILLRSFL 282
Query: 249 -ETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHK 307
++ +++ ++ M +G +P+VV++++LI+++ + R EA+ V E M + G+ P
Sbjct: 283 NKSRWEDGERLMKDMVLSGCEPNVVTHSILISSFCREGRVREAVNVLEVMKEKGLTPDSY 342
Query: 308 AYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRL 367
+Y+ L+ AF G +D A + M D C PDI +Y T+L+ + A F +L
Sbjct: 343 SYDPLISAFCKEGRLDLAIEYLEKMVSDGCLPDIVNYNTILATLCKFGCADLALDVFEKL 402
Query: 368 KQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDF 427
+ G P V Y T+ N K +E+ +M GI P++ + +++ ++
Sbjct: 403 DEVGCPPTVRAYNTMFSALWSCGNKIKALEMISEMIRKGIDPDEITYNSLISCLCRDGLV 462
Query: 428 DSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELL 469
D A+ +ME+ F P + NI+L A E ELL
Sbjct: 463 DEAIGLLVDMEATRFQPTVISFNIVLLGMCKAHRVFEGIELL 504
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 85/325 (26%), Positives = 158/325 (48%), Gaps = 8/325 (2%)
Query: 137 LMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEE 196
L+ R G++ + + S G +P + ++K F + K+A V M +L+
Sbjct: 68 LLNRSCRAGKHNESLYFLESVVSKGFKPDVVLCTKLIKGFFNSRNLKKAMRV-MEILETY 126
Query: 197 KSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVS 256
P D ++ MI + KA + A ++F M RG VTYN ++ + ++
Sbjct: 127 GDP---DVYSYNAMISGFSKANQIDSANQVFDRMRSRGFSPDVVTYNIMIGSLCSRGKLE 183
Query: 257 ---KIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILL 313
++ D++ + G +P V++Y +LI A R EAL +F+E++ G+RP YN ++
Sbjct: 184 LAFEVMDELLKDGCKPSVITYTILIEATILEGRINEALELFDELVSRGLRPDLYTYNAII 243
Query: 314 DAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFV 373
GM D+A + + C+PD+ SY +L +++N S E E+ + + G
Sbjct: 244 RGICKEGMEDRALDFVRHLSARGCNPDVVSYNILLRSFLNKSRWEDGERLMKDMVLSGCE 303
Query: 374 PNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVW 433
PNV+T+ LI + + + + + + + M+ G+ P+ + ++ A+ K D A+ +
Sbjct: 304 PNVVTHSILISSFCREGRVREAVNVLEVMKEKGLTPDSYSYDPLISAFCKEGRLDLAIEY 363
Query: 434 YKEMESCGFPPDQKAKN-ILLSLAK 457
++M S G PD N IL +L K
Sbjct: 364 LEKMVSDGCLPDIVNYNTILATLCK 388
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 94/388 (24%), Positives = 176/388 (45%), Gaps = 7/388 (1%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
LI + + KA +V+ + G P V S+ A++ + + + +A +F RM+S G
Sbjct: 103 LIKGFFNSRNLKKAMRVMEILETYG-DPDVYSYNAMISGFSKANQIDSANQVFDRMRSRG 161
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
P +TY I++ K + A EV LL K KP + ++I G
Sbjct: 162 FSPDVVTYNIMIGSLCSRGKLELAFEVMDELL---KDGCKPSVITYTILIEATILEGRIN 218
Query: 222 KARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSKIYD---QMQRAGLQPDVVSYALLI 278
+A +LF + RG++ TYN+++ + D + G PDVVSY +L+
Sbjct: 219 EALELFDELVSRGLRPDLYTYNAIIRGICKEGMEDRALDFVRHLSARGCNPDVVSYNILL 278
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCS 338
++ R E+ + ++M+ +G P ++IL+ +F G V +A V + M+ +
Sbjct: 279 RSFLNKSRWEDGERLMKDMVLSGCEPNVVTHSILISSFCREGRVREAVNVLEVMKEKGLT 338
Query: 339 PDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEI 398
PD SY ++SA+ ++ A ++ ++ DG +P+++ Y T++ K + +++
Sbjct: 339 PDSYSYDPLISAFCKEGRLDLAIEYLEKMVSDGCLPDIVNYNTILATLCKFGCADLALDV 398
Query: 399 YDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKT 458
++K+ G P + T+ A + A+ EM G PD+ N L+S
Sbjct: 399 FEKLDEVGCPPTVRAYNTMFSALWSCGNKIKALEMISEMIRKGIDPDEITYNSLISCLCR 458
Query: 459 ADERNEANELLGNFNHPNNEPGINGLSI 486
+EA LL + +P + +I
Sbjct: 459 DGLVDEAIGLLVDMEATRFQPTVISFNI 486
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 91/391 (23%), Positives = 174/391 (44%), Gaps = 9/391 (2%)
Query: 93 DFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEA 152
D + + L+ + G N++ L + KG+ P VV T L++ + K A
Sbjct: 59 DNRDAHLMKLLNRSCRAGKHNESLYFLESVVSKGFKPDVVLCTKLIKGFFNSRNLKKAMR 118
Query: 153 IFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKS-PLKPDQKMFHMMI 211
+ +++ G P +Y ++ F +AN+ A +VF D +S PD +++MI
Sbjct: 119 VMEILETYG-DPDVYSYNAMISGFSKANQIDSANQVF----DRMRSRGFSPDVVTYNIMI 173
Query: 212 YMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMS---FETNYKEVSKIYDQMQRAGLQ 268
G E A ++ + + G + S +TY L+ E E +++D++ GL+
Sbjct: 174 GSLCSRGKLELAFEVMDELLKDGCKPSVITYTILIEATILEGRINEALELFDELVSRGLR 233
Query: 269 PDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTV 328
PD+ +Y +I K E+ AL + G P +YNILL +F + +
Sbjct: 234 PDLYTYNAIIRGICKEGMEDRALDFVRHLSARGCNPDVVSYNILLRSFLNKSRWEDGERL 293
Query: 329 FKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAK 388
K M C P++ +++ ++S++ + A +K+ G P+ +Y LI + K
Sbjct: 294 MKDMVLSGCEPNVVTHSILISSFCREGRVREAVNVLEVMKEKGLTPDSYSYDPLISAFCK 353
Query: 389 VNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKA 448
L+ +E +KM +G P+ + TI+ K D A+ +++++ G PP +A
Sbjct: 354 EGRLDLAIEYLEKMVSDGCLPDIVNYNTILATLCKFGCADLALDVFEKLDEVGCPPTVRA 413
Query: 449 KNILLSLAKTADERNEANELLGNFNHPNNEP 479
N + S + + +A E++ +P
Sbjct: 414 YNTMFSALWSCGNKIKALEMISEMIRKGIDP 444
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 83/388 (21%), Positives = 180/388 (46%), Gaps = 10/388 (2%)
Query: 36 NQIEEVGSAVAVLRSERTRGQPLPKDLVLGTLVRLKQLKKWNVVSEVLEWLRIQSWWDFN 95
NQI+ +RS + ++++G+L +L+ + EV++ L ++ +
Sbjct: 145 NQIDSANQVFDRMRSRGFSPDVVTYNIMIGSLCSRGKLE---LAFEVMDEL-LKDGCKPS 200
Query: 96 EMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFR 155
+ + +LI A +G N+A ++ + +G P + ++ A++ + G A R
Sbjct: 201 VITYTILIEATILEGRINEALELFDELVSRGLRPDLYTYNAIIRGICKEGMEDRALDFVR 260
Query: 156 RMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYK 215
+ + G P ++Y I+L+ F+ +++++ E + + D S +P+ ++I +
Sbjct: 261 HLSARGCNPDVVSYNILLRSFLNKSRWEDGERL---MKDMVLSGCEPNVVTHSILISSFC 317
Query: 216 KAGGYEKARKLFALMAERGVQQSTVTYNSLMSF---ETNYKEVSKIYDQMQRAGLQPDVV 272
+ G +A + +M E+G+ + +Y+ L+S E + ++M G PD+V
Sbjct: 318 REGRVREAVNVLEVMKEKGLTPDSYSYDPLISAFCKEGRLDLAIEYLEKMVSDGCLPDIV 377
Query: 273 SYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCM 332
+Y ++ K + AL VFE++ + G PT +AYN + A G +A + M
Sbjct: 378 NYNTILATLCKFGCADLALDVFEKLDEVGCPPTVRAYNTMFSALWSCGNKIKALEMISEM 437
Query: 333 RRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNL 392
R PD +Y +++S ++ A ++ F P VI++ ++ G K + +
Sbjct: 438 IRKGIDPDEITYNSLISCLCRDGLVDEAIGLLVDMEATRFQPTVISFNIVLLGMCKAHRV 497
Query: 393 EKMMEIYDKMRVNGIKPNQTIFTTIMDA 420
+ +E+ M G PN+T + +++
Sbjct: 498 FEGIELLITMVEKGCLPNETSYVLLIEG 525
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 71/309 (22%), Positives = 139/309 (44%), Gaps = 6/309 (1%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
+I K+G ++A + ++ +G P VVS+ L+ ++ R+++ E + + M SG
Sbjct: 242 IIRGICKEGMEDRALDFVRHLSARGCNPDVVSYNILLRSFLNKSRWEDGERLMKDMVLSG 301
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
P+ +T+ I++ F + +EA V + +EK L PD + +I + K G +
Sbjct: 302 CEPNVVTHSILISSFCREGRVREAVNVLEVM--KEKG-LTPDSYSYDPLISAFCKEGRLD 358
Query: 222 KARKLFALMAERGVQQSTVTYNSLMSFETNYKEVS---KIYDQMQRAGLQPDVVSYALLI 278
A + M G V YN++++ + +++++ G P V +Y +
Sbjct: 359 LAIEYLEKMVSDGCLPDIVNYNTILATLCKFGCADLALDVFEKLDEVGCPPTVRAYNTMF 418
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCS 338
+A + +AL + EM+ G+ P YN L+ G+VD+A + M R
Sbjct: 419 SALWSCGNKIKALEMISEMIRKGIDPDEITYNSLISCLCRDGLVDEAIGLLVDMEATRFQ 478
Query: 339 PDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEI 398
P + S+ +L A + + + + G +PN +Y LI+G A + ME+
Sbjct: 479 PTVISFNIVLLGMCKAHRVFEGIELLITMVEKGCLPNETSYVLLIEGIAYAGWRAEAMEL 538
Query: 399 YDKMRVNGI 407
+ + G+
Sbjct: 539 ANSLYRLGV 547
Score = 89.0 bits (219), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 106/223 (47%), Gaps = 1/223 (0%)
Query: 266 GLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQA 325
G +PDVV LI + +R ++A+ V E +L+ P +YN ++ F+ + +D A
Sbjct: 92 GFKPDVVLCTKLIKGFFNSRNLKKAMRVME-ILETYGDPDVYSYNAMISGFSKANQIDSA 150
Query: 326 RTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKG 385
VF MR SPD+ +Y M+ + + +E A + L +DG P+VITY LI+
Sbjct: 151 NQVFDRMRSRGFSPDVVTYNIMIGSLCSRGKLELAFEVMDELLKDGCKPSVITYTILIEA 210
Query: 386 YAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPD 445
+ + +E++D++ G++P+ + I+ K D A+ + + + + G PD
Sbjct: 211 TILEGRINEALELFDELVSRGLRPDLYTYNAIIRGICKEGMEDRALDFVRHLSARGCNPD 270
Query: 446 QKAKNILLSLAKTADERNEANELLGNFNHPNNEPGINGLSISV 488
+ NILL + L+ + EP + SI +
Sbjct: 271 VVSYNILLRSFLNKSRWEDGERLMKDMVLSGCEPNVVTHSILI 313
>gi|357110839|ref|XP_003557223.1| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
mitochondrial-like [Brachypodium distachyon]
Length = 897
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 96/383 (25%), Positives = 188/383 (49%), Gaps = 7/383 (1%)
Query: 74 KKWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVS 133
+ ++ +V E +R + NE+ + ++I+ + G +A M G +P +
Sbjct: 259 RDFDAAKKVFEEMRRRDCA-MNEVTYNVMISGLCRSGAVEEAFGFKEEMVDYGLSPDAFT 317
Query: 134 HTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLL 193
+ ALM +GGR K A+A+ M SG +P+ + Y ++ F++ K EA ++ ++
Sbjct: 318 YGALMNGLCKGGRLKEAKALLDEMSCSGLKPNVVVYATLVDGFMKEGKAAEAFDILNEMI 377
Query: 194 DEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYK 253
+ ++P++ M+ +I K G +A KL M + G + T TY+ LM +
Sbjct: 378 ---SAGVQPNKIMYDNLIRGLCKIGQLGRASKLLNEMIKVGHRPDTFTYHPLMQGHFQHY 434
Query: 254 E---VSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYN 310
+ ++ ++M+ +G+ P+ +Y ++IN + +EA + EEM+ G++P Y
Sbjct: 435 DKDGAFELLNEMRNSGILPNAYTYGIMINGLCQNGESKEAGNLLEEMISEGLKPNAFMYA 494
Query: 311 ILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQD 370
L+ + G + A + M + PD+ Y +++ +E AE+++ ++++
Sbjct: 495 PLIIGHSKEGHISLACESLENMTKANVLPDLFCYNSLIKGLSTVGRIEEAEEYYAQVQKR 554
Query: 371 GFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSA 430
G VP+ TY LI GY K NLEK ++ +M +G+KPN +T +++ Y K+ D +
Sbjct: 555 GLVPDEFTYSGLIHGYCKTRNLEKADQLLQQMLNSGLKPNADTYTDLLEGYFKSNDHEKV 614
Query: 431 VVWYKEMESCGFPPDQKAKNILL 453
+ M G PD I++
Sbjct: 615 SSILQSMLGSGDKPDNHIYGIVI 637
Score = 140 bits (352), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 100/439 (22%), Positives = 197/439 (44%), Gaps = 40/439 (9%)
Query: 62 LVLGTLVRLKQLKKWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSF 121
LV G + K + +++++E+ I + N++ + LI K G +A K+L+
Sbjct: 356 LVDGFMKEGKAAEAFDILNEM-----ISAGVQPNKIMYDNLIRGLCKIGQLGRASKLLNE 410
Query: 122 MNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANK 181
M K G+ P ++ LM+ + + A + M++SG P+A TY I++ + +
Sbjct: 411 MIKVGHRPDTFTYHPLMQGHFQHYDKDGAFELLNEMRNSGILPNAYTYGIMINGLCQNGE 470
Query: 182 FKEAEEVFMTLLDEEKSP--------------------------------LKPDQKMFHM 209
KEA + ++ E P + PD ++
Sbjct: 471 SKEAGNLLEEMISEGLKPNAFMYAPLIIGHSKEGHISLACESLENMTKANVLPDLFCYNS 530
Query: 210 MIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFET---NYKEVSKIYDQMQRAG 266
+I G E+A + +A + +RG+ TY+ L+ N ++ ++ QM +G
Sbjct: 531 LIKGLSTVGRIEEAEEYYAQVQKRGLVPDEFTYSGLIHGYCKTRNLEKADQLLQQMLNSG 590
Query: 267 LQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQAR 326
L+P+ +Y L+ Y K+ E+ ++ + ML +G +P + Y I++ + S ++ A
Sbjct: 591 LKPNADTYTDLLEGYFKSNDHEKVSSILQSMLGSGDKPDNHIYGIVIRNLSRSENMEVAF 650
Query: 327 TVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGY 386
V + ++ PD+ Y++++S +DME A + ++G P ++ Y LI G+
Sbjct: 651 MVLTEVEKNGLVPDLHIYSSLISGLCKMADMEKAVGLLDEMAKEGLEPGIVCYNALIDGF 710
Query: 387 AKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQ 446
+ ++ + ++D + G+ PN +T ++D KN D A YK+M G PD
Sbjct: 711 CRSGDISRARNVFDSILAKGLLPNCVTYTALIDGNCKNGDITDAFDLYKDMLDRGIAPDA 770
Query: 447 KAKNILLSLAKTADERNEA 465
N+L + A + +A
Sbjct: 771 FVYNVLATGCSDAADLEQA 789
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 90/370 (24%), Positives = 161/370 (43%), Gaps = 6/370 (1%)
Query: 101 MLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSS 160
+L+ Y K G A +V+ M G AP+ L++ R + + M+ +
Sbjct: 180 VLVDTYKKNGSVRTAAQVVLMMGDLGLAPTRRCCNGLLKDLLRADAMELVWKLKGFMEGA 239
Query: 161 GPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGY 220
G P TY L+ +A F A++VF + + ++ +++MI ++G
Sbjct: 240 GIPPDVYTYSTFLEAHCKARDFDAAKKVFEEM---RRRDCAMNEVTYNVMISGLCRSGAV 296
Query: 221 EKARKLFALMAERGVQQSTVTYNSLMSFETN---YKEVSKIYDQMQRAGLQPDVVSYALL 277
E+A M + G+ TY +LM+ KE + D+M +GL+P+VV YA L
Sbjct: 297 EEAFGFKEEMVDYGLSPDAFTYGALMNGLCKGGRLKEAKALLDEMSCSGLKPNVVVYATL 356
Query: 278 INAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRC 337
++ + K + EA + EM+ AGV+P Y+ L+ G + +A + M +
Sbjct: 357 VDGFMKEGKAAEAFDILNEMISAGVQPNKIMYDNLIRGLCKIGQLGRASKLLNEMIKVGH 416
Query: 338 SPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMME 397
PD +Y ++ + D +GA + ++ G +PN TYG +I G + ++
Sbjct: 417 RPDTFTYHPLMQGHFQHYDKDGAFELLNEMRNSGILPNAYTYGIMINGLCQNGESKEAGN 476
Query: 398 IYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAK 457
+ ++M G+KPN ++ ++ + K A + M PD N L+
Sbjct: 477 LLEEMISEGLKPNAFMYAPLIIGHSKEGHISLACESLENMTKANVLPDLFCYNSLIKGLS 536
Query: 458 TADERNEANE 467
T EA E
Sbjct: 537 TVGRIEEAEE 546
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 81/351 (23%), Positives = 153/351 (43%), Gaps = 6/351 (1%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + ++I + G+ +A +L M +G P+ + L+ + + G A
Sbjct: 454 NAYTYGIMINGLCQNGESKEAGNLLEEMISEGLKPNAFMYAPLIIGHSKEGHISLACESL 513
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
M + P Y ++K + +EAEE + + +K L PD+ + +I+ Y
Sbjct: 514 ENMTKANVLPDLFCYNSLIKGLSTVGRIEEAEEYYAQV---QKRGLVPDEFTYSGLIHGY 570
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSLMS--FETN-YKEVSKIYDQMQRAGLQPDV 271
K EKA +L M G++ + TY L+ F++N +++VS I M +G +PD
Sbjct: 571 CKTRNLEKADQLLQQMLNSGLKPNADTYTDLLEGYFKSNDHEKVSSILQSMLGSGDKPDN 630
Query: 272 VSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKC 331
Y ++I ++ E A V E+ G+ P Y+ L+ +++A +
Sbjct: 631 HIYGIVIRNLSRSENMEVAFMVLTEVEKNGLVPDLHIYSSLISGLCKMADMEKAVGLLDE 690
Query: 332 MRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNN 391
M ++ P I Y ++ + + D+ A F + G +PN +TY LI G K +
Sbjct: 691 MAKEGLEPGIVCYNALIDGFCRSGDISRARNVFDSILAKGLLPNCVTYTALIDGNCKNGD 750
Query: 392 LEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGF 442
+ ++Y M GI P+ ++ + D + A+ +EM + G+
Sbjct: 751 ITDAFDLYKDMLDRGIAPDAFVYNVLATGCSDAADLEQALFLTEEMFNRGY 801
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 78/340 (22%), Positives = 160/340 (47%), Gaps = 7/340 (2%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
LI G +AE+ + + K+G P +++ L+ Y + + A+ + ++M +SG
Sbjct: 531 LIKGLSTVGRIEEAEEYYAQVQKRGLVPDEFTYSGLIHGYCKTRNLEKADQLLQQMLNSG 590
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
+P+A TY +L+ + ++N ++ + ++L S KPD ++ ++I ++ E
Sbjct: 591 LKPNADTYTDLLEGYFKSNDHEKVSSILQSMLG---SGDKPDNHIYGIVIRNLSRSENME 647
Query: 222 KARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSK---IYDQMQRAGLQPDVVSYALLI 278
A + + + G+ Y+SL+S ++ K + D+M + GL+P +V Y LI
Sbjct: 648 VAFMVLTEVEKNGLVPDLHIYSSLISGLCKMADMEKAVGLLDEMAKEGLEPGIVCYNALI 707
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCS 338
+ + ++ A VF+ +L G+ P Y L+D +G + A ++K M +
Sbjct: 708 DGFCRSGDISRARNVFDSILAKGLLPNCVTYTALIDGNCKNGDITDAFDLYKDMLDRGIA 767
Query: 339 PDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEI 398
PD Y + + +A+D+E A + G+ +V + TL++G+ K L++ ++
Sbjct: 768 PDAFVYNVLATGCSDAADLEQALFLTEEMFNRGYA-HVSLFSTLVRGFCKRGRLQETEKL 826
Query: 399 YDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEME 438
M I PN ++ +GK A + E++
Sbjct: 827 LHVMMDREIVPNAQTVENVITEFGKAGKLCEAHRVFAELQ 866
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 61/273 (22%), Positives = 119/273 (43%), Gaps = 3/273 (1%)
Query: 200 LKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFET---NYKEVS 256
L P ++ + ++ +A E KL M G+ TY++ + ++
Sbjct: 206 LAPTRRCCNGLLKDLLRADAMELVWKLKGFMEGAGIPPDVYTYSTFLEAHCKARDFDAAK 265
Query: 257 KIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAF 316
K++++M+R + V+Y ++I+ ++ EEA EEM+D G+ P Y L++
Sbjct: 266 KVFEEMRRRDCAMNEVTYNVMISGLCRSGAVEEAFGFKEEMVDYGLSPDAFTYGALMNGL 325
Query: 317 AISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNV 376
G + +A+ + M P++ Y T++ ++ A + G PN
Sbjct: 326 CKGGRLKEAKALLDEMSCSGLKPNVVVYATLVDGFMKEGKAAEAFDILNEMISAGVQPNK 385
Query: 377 ITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKE 436
I Y LI+G K+ L + ++ ++M G +P+ + +M + ++ D D A E
Sbjct: 386 IMYDNLIRGLCKIGQLGRASKLLNEMIKVGHRPDTFTYHPLMQGHFQHYDKDGAFELLNE 445
Query: 437 MESCGFPPDQKAKNILLSLAKTADERNEANELL 469
M + G P+ I+++ E EA LL
Sbjct: 446 MRNSGILPNAYTYGIMINGLCQNGESKEAGNLL 478
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 86/184 (46%), Gaps = 2/184 (1%)
Query: 297 MLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASD 356
M AG+ P Y+ L+A + D A+ VF+ MRR C+ + +Y M+S +
Sbjct: 236 MEGAGIPPDVYTYSTFLEAHCKARDFDAAKKVFEEMRRRDCAMNEVTYNVMISGLCRSGA 295
Query: 357 MEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTT 416
+E A F + G P+ TYG L+ G K L++ + D+M +G+KPN ++ T
Sbjct: 296 VEEAFGFKEEMVDYGLSPDAFTYGALMNGLCKGGRLKEAKALLDEMSCSGLKPNVVVYAT 355
Query: 417 IMDAYGKNKDFDSAVVWYKEMESCGFPPDQKA-KNILLSLAKTADERNEANELLGNFNHP 475
++D + K A EM S G P++ N++ L K + A++LL
Sbjct: 356 LVDGFMKEGKAAEAFDILNEMISAGVQPNKIMYDNLIRGLCKIG-QLGRASKLLNEMIKV 414
Query: 476 NNEP 479
+ P
Sbjct: 415 GHRP 418
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 37/179 (20%), Positives = 76/179 (42%), Gaps = 37/179 (20%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
LI + + GD ++A V + KG P+ V++TAL++ + G +A +++ M G
Sbjct: 706 LIDGFCRSGDISRARNVFDSILAKGLLPNCVTYTALIDGNCKNGDITDAFDLYKDMLDRG 765
Query: 162 PRPSALTYQII----------------------------------LKLFVEANKFKEAEE 187
P A Y ++ ++ F + + +E E+
Sbjct: 766 IAPDAFVYNVLATGCSDAADLEQALFLTEEMFNRGYAHVSLFSTLVRGFCKRGRLQETEK 825
Query: 188 VFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLM 246
+ ++D E + P+ + +I + KAG +A ++FA + ++ QS+ SL+
Sbjct: 826 LLHVMMDRE---IVPNAQTVENVITEFGKAGKLCEAHRVFAELQQKKASQSSTDRFSLL 881
Score = 45.4 bits (106), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 37/180 (20%), Positives = 73/180 (40%)
Query: 310 NILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQ 369
++L+D + +G V A V M +P +L + A ME K ++
Sbjct: 179 DVLVDTYKKNGSVRTAAQVVLMMGDLGLAPTRRCCNGLLKDLLRADAMELVWKLKGFMEG 238
Query: 370 DGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDS 429
G P+V TY T ++ + K + + +++++MR N+ + ++ ++ +
Sbjct: 239 AGIPPDVYTYSTFLEAHCKARDFDAAKKVFEEMRRRDCAMNEVTYNVMISGLCRSGAVEE 298
Query: 430 AVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGINGLSISVD 489
A + +EM G PD L++ EA LL + +P + + VD
Sbjct: 299 AFGFKEEMVDYGLSPDAFTYGALMNGLCKGGRLKEAKALLDEMSCSGLKPNVVVYATLVD 358
>gi|356569143|ref|XP_003552765.1| PREDICTED: pentatricopeptide repeat-containing protein At5g39980,
chloroplastic-like [Glycine max]
Length = 658
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 95/378 (25%), Positives = 186/378 (49%), Gaps = 39/378 (10%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
LI K D++KA + S + +P ++++ +++ +G+ ++ A + + M+ +
Sbjct: 211 LIDLARKLSDYSKAISIFSRLKASTISPDLIAYNSMINVFGKAKLFREARLLLQEMRDNA 270
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
+P ++Y +L ++V+ KF EA +F + +E K PL D ++MI +Y + +
Sbjct: 271 VQPDTVSYSTLLAIYVDNQKFVEALSLFFEM-NEAKCPL--DLTTCNIMIDVYGQLHMPK 327
Query: 222 KARKLFALMAERGVQQSTVTYNSLMSFETN---YKEVSKIYDQMQRAGLQPDVVSYALLI 278
+A +LF M + G+Q + V+YN+L+ + E ++ MQ +Q +VV+Y +I
Sbjct: 328 EADRLFWSMRKMGIQPNVVSYNTLLRVYGEADLFGEAIHLFRLMQSKDVQQNVVTYNTMI 387
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCS 338
N YGK E+A + +EM G+ P Y+ ++ + +G +D+A +F+ +R
Sbjct: 388 NIYGKTLEHEKATNLIQEMKKRGIEPNAITYSTIISIWEKAGKLDRAAILFQKLRSSGVR 447
Query: 339 PDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVP------------------------ 374
D Y TM+ AY A + A++ LK+ +P
Sbjct: 448 IDEVLYQTMIVAYERAGLVAHAKRLLHELKRPDNIPRDTAIGILARAGRIEEATWVFRQA 507
Query: 375 -------NVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDF 427
++ +G +I ++K ++E+++KMRV G P+ + +++A+GK ++F
Sbjct: 508 FDAREVKDISVFGCMINLFSKNKKYGNVVEVFEKMRVVGYFPDSDVIALVLNAFGKLREF 567
Query: 428 DSAVVWYKEM--ESCGFP 443
D A Y++M E C FP
Sbjct: 568 DKADALYRQMHEEGCVFP 585
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 98/403 (24%), Positives = 186/403 (46%), Gaps = 7/403 (1%)
Query: 88 IQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKG-YAPSVVSHTALMEAYGRGGR 146
+ S ++ ++ +++ ++ D+ +A +L ++N K Y+PS+ ++ L+ R +
Sbjct: 91 VMSPYNGRQLSMRFMVSLLSREPDWQRALALLDWINDKALYSPSLFAYNVLLRNVLRAKQ 150
Query: 147 YKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKM 206
+ A +F M+ G P TY ++ F + F + L E+ + D +
Sbjct: 151 WHLAHGLFDEMRQKGLSPDRYTYSTLITSFGKHGLFDSS---LFWLQQMEQDNVSGDLVL 207
Query: 207 FHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSF---ETNYKEVSKIYDQMQ 263
+ +I + +K Y KA +F+ + + + YNS+++ ++E + +M+
Sbjct: 208 YSNLIDLARKLSDYSKAISIFSRLKASTISPDLIAYNSMINVFGKAKLFREARLLLQEMR 267
Query: 264 RAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVD 323
+QPD VSY+ L+ Y ++ EAL++F EM +A NI++D + M
Sbjct: 268 DNAVQPDTVSYSTLLAIYVDNQKFVEALSLFFEMNEAKCPLDLTTCNIMIDVYGQLHMPK 327
Query: 324 QARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLI 383
+A +F MR+ P++ SY T+L Y A A FR ++ NV+TY T+I
Sbjct: 328 EADRLFWSMRKMGIQPNVVSYNTLLRVYGEADLFGEAIHLFRLMQSKDVQQNVVTYNTMI 387
Query: 384 KGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFP 443
Y K EK + +M+ GI+PN ++TI+ + K D A + ++++ S G
Sbjct: 388 NIYGKTLEHEKATNLIQEMKKRGIEPNAITYSTIISIWEKAGKLDRAAILFQKLRSSGVR 447
Query: 444 PDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGINGLSI 486
D+ ++ + A A LL P+N P + I
Sbjct: 448 IDEVLYQTMIVAYERAGLVAHAKRLLHELKRPDNIPRDTAIGI 490
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/203 (22%), Positives = 99/203 (48%), Gaps = 1/203 (0%)
Query: 288 EEALAVFEEMLDAGV-RPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTT 346
+ ALA+ + + D + P+ AYN+LL + A +F MR+ SPD +Y+T
Sbjct: 116 QRALALLDWINDKALYSPSLFAYNVLLRNVLRAKQWHLAHGLFDEMRQKGLSPDRYTYST 175
Query: 347 MLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNG 406
+++++ + + + ++++QD +++ Y LI K+++ K + I+ +++ +
Sbjct: 176 LITSFGKHGLFDSSLFWLQQMEQDNVSGDLVLYSNLIDLARKLSDYSKAISIFSRLKAST 235
Query: 407 IKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEAN 466
I P+ + ++++ +GK K F A + +EM PD + + LL++ + EA
Sbjct: 236 ISPDLIAYNSMINVFGKAKLFREARLLLQEMRDNAVQPDTVSYSTLLAIYVDNQKFVEAL 295
Query: 467 ELLGNFNHPNNEPGINGLSISVD 489
L N + +I +D
Sbjct: 296 SLFFEMNEAKCPLDLTTCNIMID 318
>gi|5454208|gb|AAD43623.1|AC005698_22 T3P18.22 [Arabidopsis thaliana]
Length = 425
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 94/372 (25%), Positives = 177/372 (47%), Gaps = 6/372 (1%)
Query: 101 MLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSS 160
+++ K+GD + A +L+ M + P V+ + +++ + +A +F+ M++
Sbjct: 21 VVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETK 80
Query: 161 GPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGY 220
G RP+ +TY ++ ++ +A + +++ + + PD F +I + K G
Sbjct: 81 GIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERK---INPDVFTFSALIDAFVKEGKL 137
Query: 221 EKARKLFALMAERGVQQSTVTYNSLM---SFETNYKEVSKIYDQMQRAGLQPDVVSYALL 277
+A KL+ M +R + S VTY+SL+ E ++++ M PDVV+Y L
Sbjct: 138 VEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTL 197
Query: 278 INAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRC 337
I + K +R EE + VF EM G+ YNIL+ +G D A+ +FK M D
Sbjct: 198 IKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGV 257
Query: 338 SPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMME 397
P+I +Y T+L +E A F L++ P + TY +I+G K +E +
Sbjct: 258 PPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWD 317
Query: 398 IYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAK 457
++ + + G+KP+ + T++ + + + A +KEM+ G P+ N L+
Sbjct: 318 LFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARL 377
Query: 458 TADERNEANELL 469
+R + EL+
Sbjct: 378 RDGDREASAELI 389
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 92/357 (25%), Positives = 173/357 (48%), Gaps = 6/357 (1%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
+I K + A + M KG P+VV++++L+ GR+ +A + M
Sbjct: 57 IIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERK 116
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
P T+ ++ FV+ K EAE+++ ++ K + P + +I + +
Sbjct: 117 INPDVFTFSALIDAFVKEGKLVEAEKLYDEMV---KRSIDPSIVTYSSLINGFCMHDRLD 173
Query: 222 KARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSK---IYDQMQRAGLQPDVVSYALLI 278
+A+++F M + VTYN+L+ YK V + ++ +M + GL + V+Y +LI
Sbjct: 174 EAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILI 233
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCS 338
+A + A +F+EM+ GV P YN LLD +G +++A VF+ ++R +
Sbjct: 234 QGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKME 293
Query: 339 PDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEI 398
P I +Y M+ A +E F L G P+V+ Y T+I G+ + + E+ +
Sbjct: 294 PTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADAL 353
Query: 399 YDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSL 455
+ +M+ +G PN + T++ A ++ D +++ KEM SCGF D ++ ++
Sbjct: 354 FKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLVTNM 410
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 85/333 (25%), Positives = 166/333 (49%), Gaps = 6/333 (1%)
Query: 152 AIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMI 211
A+ RM + G +P +TY +++ K + + F L E+ L+P +++ +I
Sbjct: 2 ALIDRMVAKGCQPDLVTYGVVVNGLC---KRGDTDLAFNLLNKMEQGKLEPGVLIYNTII 58
Query: 212 YMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNY---KEVSKIYDQMQRAGLQ 268
K + A LF M +G++ + VTY+SL+S NY + S++ M +
Sbjct: 59 DGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKIN 118
Query: 269 PDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTV 328
PDV +++ LI+A+ K + EA +++EM+ + P+ Y+ L++ F + +D+A+ +
Sbjct: 119 PDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQM 178
Query: 329 FKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAK 388
F+ M C PD+ +Y T++ + +E + FR + Q G V N +TY LI+G +
Sbjct: 179 FEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQ 238
Query: 389 VNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKA 448
+ + EI+ +M +G+ PN + T++D KN + A+V ++ ++ P
Sbjct: 239 AGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYT 298
Query: 449 KNILLSLAKTADERNEANELLGNFNHPNNEPGI 481
NI++ A + + +L N + +P +
Sbjct: 299 YNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDV 331
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 84/315 (26%), Positives = 166/315 (52%), Gaps = 6/315 (1%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + + LI+ G ++ A ++LS M ++ P V + +AL++A+ + G+ AE ++
Sbjct: 85 NVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLY 144
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
M PS +TY ++ F ++ EA+++F ++ + PD ++ +I +
Sbjct: 145 DEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKH---CFPDVVTYNTLIKGF 201
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSLMS--FETNYKEVSK-IYDQMQRAGLQPDV 271
K E+ ++F M++RG+ +TVTYN L+ F+ ++++ I+ +M G+ P++
Sbjct: 202 CKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNI 261
Query: 272 VSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKC 331
++Y L++ K + E+A+ VFE + + + PT YNI+++ +G V+ +F
Sbjct: 262 MTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCN 321
Query: 332 MRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNN 391
+ PD+ +Y TM+S + E A+ F+ +K+DG +PN Y TLI+ + +
Sbjct: 322 LSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGD 381
Query: 392 LEKMMEIYDKMRVNG 406
E E+ +MR G
Sbjct: 382 REASAELIKEMRSCG 396
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 84/361 (23%), Positives = 159/361 (44%), Gaps = 6/361 (1%)
Query: 122 MNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANK 181
M KG P +V++ ++ + G A + +M+ P L Y I+ K
Sbjct: 7 MVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLC---K 63
Query: 182 FKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVT 241
+K ++ + E ++P+ + +I G + A +L + M ER + T
Sbjct: 64 YKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFT 123
Query: 242 YNSLM-SF--ETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEML 298
+++L+ +F E E K+YD+M + + P +V+Y+ LIN + R +EA +FE M+
Sbjct: 124 FSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMV 183
Query: 299 DAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDME 358
P YN L+ F V++ VF+ M + + +Y ++ A D +
Sbjct: 184 SKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCD 243
Query: 359 GAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIM 418
A++ F+ + DG PN++TY TL+ G K LEK M +++ ++ + ++P + ++
Sbjct: 244 MAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMI 303
Query: 419 DAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNE 478
+ K + + + G PD A N ++S + EA+ L
Sbjct: 304 EGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTL 363
Query: 479 P 479
P
Sbjct: 364 P 364
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 85/343 (24%), Positives = 170/343 (49%), Gaps = 9/343 (2%)
Query: 44 AVAVLRSERTRGQPLPKDLVLGTLVR-LKQLKKWNVVSEVLEWLRIQSWWDFNEMDFLML 102
A+ + + T+G P + +L+ L +W+ S +L + I+ + + F L
Sbjct: 70 ALNLFKEMETKGIR-PNVVTYSSLISCLCNYGRWSDASRLLSDM-IERKINPDVFTFSAL 127
Query: 103 ITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGP 162
I A+ K+G +AEK+ M K+ PS+V++++L+ + R A+ +F M S
Sbjct: 128 IDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHC 187
Query: 163 RPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEK 222
P +TY ++K F + + +E EVF + + L + ++++I +AG +
Sbjct: 188 FPDVVTYNTLIKGFCKYKRVEEGMEVFREM---SQRGLVGNTVTYNILIQGLFQAGDCDM 244
Query: 223 ARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSK---IYDQMQRAGLQPDVVSYALLIN 279
A+++F M GV + +TYN+L+ ++ K +++ +QR+ ++P + +Y ++I
Sbjct: 245 AQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIE 304
Query: 280 AYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSP 339
KA + E+ +F + GV+P AYN ++ F G ++A +FK M+ D P
Sbjct: 305 GMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLP 364
Query: 340 DICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTL 382
+ Y T++ A + D E + + + ++ GF + T G +
Sbjct: 365 NSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLV 407
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/241 (23%), Positives = 111/241 (46%), Gaps = 10/241 (4%)
Query: 56 QPLPKDLVLGTLVRLKQLKKWNVVSEVLEWLRIQSWWDF--NEMDFLMLITAYGKQGDFN 113
P + TL+ K K+ V E +E R S N + + +LI + GD +
Sbjct: 186 HCFPDVVTYNTLI--KGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCD 243
Query: 114 KAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIIL 173
A+++ M G P+++++ L++ + G+ + A +F +Q S P+ TY I++
Sbjct: 244 MAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMI 303
Query: 174 KLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAER 233
+ +A K ++ ++F L +KPD ++ MI + + G E+A LF M E
Sbjct: 304 EGMCKAGKVEDGWDLFCNL---SLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKED 360
Query: 234 GVQQSTVTYNSLMSF---ETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEA 290
G ++ YN+L+ + + + +++ +M+ G D + L+ N R ++
Sbjct: 361 GTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLVTNMLHDGRLDKSF 420
Query: 291 L 291
L
Sbjct: 421 L 421
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/179 (21%), Positives = 72/179 (40%)
Query: 291 LAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSA 350
+A+ + M+ G +P Y ++++ G D A + M + + P + Y T++
Sbjct: 1 MALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDG 60
Query: 351 YVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPN 410
M+ A F+ ++ G PNV+TY +LI + M I P+
Sbjct: 61 LCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPD 120
Query: 411 QTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELL 469
F+ ++DA+ K A Y EM P + L++ D +EA ++
Sbjct: 121 VFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMF 179
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/124 (26%), Positives = 59/124 (47%)
Query: 366 RLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNK 425
R+ G P+++TYG ++ G K + + + +KM ++P I+ TI+D K K
Sbjct: 6 RMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYK 65
Query: 426 DFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGINGLS 485
D A+ +KEME+ G P+ + L+S ++A+ LL + P + S
Sbjct: 66 HMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFS 125
Query: 486 ISVD 489
+D
Sbjct: 126 ALID 129
>gi|414887392|tpg|DAA63406.1| TPA: hypothetical protein ZEAMMB73_124662 [Zea mays]
Length = 795
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 98/372 (26%), Positives = 183/372 (49%), Gaps = 11/372 (2%)
Query: 103 ITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGP 162
I + + G +A +L + AP ++TAL+ A+ R GR+++A A+F+RM G
Sbjct: 160 IRVFARAGCLAEASAIL----EAAPAPDASAYTALVSAFSRAGRFRDAVAVFQRMVDGGV 215
Query: 163 RPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKS-PLKPDQKMFHMMIYMYKKAGGYE 221
+P+ +TY ++ + +K + + L+D K ++ D+ ++ +I ++ G +
Sbjct: 216 QPALVTYNVVFHAY---SKMSVPWKEVVALVDSMKEDGIERDRYTYNTLISCCRRRGLHR 272
Query: 222 KARKLFALMAERGVQQSTVTYNSLMSF---ETNYKEVSKIYDQMQRAGLQPDVVSYALLI 278
+A ++F M G + VT+NSL+ ++E + +M+ AG P VV+Y LI
Sbjct: 273 EAAQVFDEMKAAGFEPDKVTFNSLLDVYGKARKHEEAIGVLKRMENAGCTPSVVTYNSLI 332
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCS 338
+AY K EEAL + +EM G++P Y L+ G +D A + M R+ CS
Sbjct: 333 SAYVKDGLLEEALELKQEMEFRGMKPDVVTYTTLISGLDRVGKIDAALATYSEMVRNGCS 392
Query: 339 PDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEI 398
P++C+Y ++ + F L+ G+VP+V+T+ TL+ + + ++ +
Sbjct: 393 PNLCTYNALIKLHGVRGKFTEMMAVFDDLRSAGYVPDVVTWNTLLSVFGQNGLDSEVSGV 452
Query: 399 YDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKT 458
+ +M+ G P + + +++ +Y + FD A+ YK M G PD N +LS
Sbjct: 453 FKEMKKAGYIPERDTYVSLISSYSRCGLFDQAMEIYKRMIEAGIYPDISTYNAVLSALAR 512
Query: 459 ADERNEANELLG 470
+A +L
Sbjct: 513 GGRWEQAEKLFA 524
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 85/320 (26%), Positives = 160/320 (50%), Gaps = 6/320 (1%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
LI+ ++G +A +V M G+ P V+ +L++ YG+ +++ A + +RM+++G
Sbjct: 261 LISCCRRRGLHREAAQVFDEMKAAGFEPDKVTFNSLLDVYGKARKHEEAIGVLKRMENAG 320
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
PS +TY ++ +V+ +EA E+ + E +KPD + +I + G +
Sbjct: 321 CTPSVVTYNSLISAYVKDGLLEEALELKQEM---EFRGMKPDVVTYTTLISGLDRVGKID 377
Query: 222 KARKLFALMAERGVQQSTVTYNSLMSFET---NYKEVSKIYDQMQRAGLQPDVVSYALLI 278
A ++ M G + TYN+L+ + E+ ++D ++ AG PDVV++ L+
Sbjct: 378 AALATYSEMVRNGCSPNLCTYNALIKLHGVRGKFTEMMAVFDDLRSAGYVPDVVTWNTLL 437
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCS 338
+ +G+ + E VF+EM AG P Y L+ +++ G+ DQA ++K M
Sbjct: 438 SVFGQNGLDSEVSGVFKEMKKAGYIPERDTYVSLISSYSRCGLFDQAMEIYKRMIEAGIY 497
Query: 339 PDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEI 398
PDI +Y +LSA E AEK F + P+ ++Y +L+ YA L+KM +
Sbjct: 498 PDISTYNAVLSALARGGRWEQAEKLFAEMVDRDCKPDELSYSSLLHAYANAKKLDKMKTL 557
Query: 399 YDKMRVNGIKPNQTIFTTIM 418
+ + I+ + + T++
Sbjct: 558 SEDIYAERIERHNWLVKTLV 577
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 97/336 (28%), Positives = 159/336 (47%), Gaps = 23/336 (6%)
Query: 129 PSVVSHTALMEAYGRGGRYKNAEAIFRRMQS-SGPRPSALTYQIIL----KLFVEANKFK 183
P+VV+ A RGG A A+ R + G R AL + +L ++F A
Sbjct: 118 PAVVNTLA-----SRGGHPGIAVAVVRAARDLHGDR--ALHHPRVLPTAIRVFARAGCLA 170
Query: 184 EAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYN 243
EA + E +P PD + ++ + +AG + A +F M + GVQ + VTYN
Sbjct: 171 EASAIL------EAAP-APDASAYTALVSAFSRAGRFRDAVAVFQRMVDGGVQPALVTYN 223
Query: 244 SLMS----FETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLD 299
+ +KEV + D M+ G++ D +Y LI+ + EA VF+EM
Sbjct: 224 VVFHAYSKMSVPWKEVVALVDSMKEDGIERDRYTYNTLISCCRRRGLHREAAQVFDEMKA 283
Query: 300 AGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEG 359
AG P +N LLD + + ++A V K M C+P + +Y +++SAYV +E
Sbjct: 284 AGFEPDKVTFNSLLDVYGKARKHEEAIGVLKRMENAGCTPSVVTYNSLISAYVKDGLLEE 343
Query: 360 AEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMD 419
A + + ++ G P+V+TY TLI G +V ++ + Y +M NG PN + ++
Sbjct: 344 ALELKQEMEFRGMKPDVVTYTTLISGLDRVGKIDAALATYSEMVRNGCSPNLCTYNALIK 403
Query: 420 AYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSL 455
+G F + + ++ S G+ PD N LLS+
Sbjct: 404 LHGVRGKFTEMMAVFDDLRSAGYVPDVVTWNTLLSV 439
Score = 135 bits (339), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 99/390 (25%), Positives = 180/390 (46%), Gaps = 41/390 (10%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
LI+AY K G +A ++ M +G P VV++T L+ R G+ A A + M +G
Sbjct: 331 LISAYVKDGLLEEALELKQEMEFRGMKPDVVTYTTLISGLDRVGKIDAALATYSEMVRNG 390
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
P+ TY ++KL KF E VF D + PD ++ ++ ++ + G
Sbjct: 391 CSPNLCTYNALIKLHGVRGKFTEMMAVFD---DLRSAGYVPDVVTWNTLLSVFGQNGLDS 447
Query: 222 KARKLFALMAERGVQQSTVTYNSLMSFETN---YKEVSKIYDQMQRAGLQPDVVSYALLI 278
+ +F M + G TY SL+S + + + +IY +M AG+ PD+ +Y ++
Sbjct: 448 EVSGVFKEMKKAGYIPERDTYVSLISSYSRCGLFDQAMEIYKRMIEAGIYPDISTYNAVL 507
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTV---------- 328
+A + R E+A +F EM+D +P +Y+ LL A+A + +D+ +T+
Sbjct: 508 SALARGGRWEQAEKLFAEMVDRDCKPDELSYSSLLHAYANAKKLDKMKTLSEDIYAERIE 567
Query: 329 -------------------------FKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKF 363
F+ +RR RCS DI M+S Y ++ E+
Sbjct: 568 RHNWLVKTLVLVNNKVNNLPETEKAFQELRRRRCSLDINVLNAMVSIYGKNKMVKKVEEV 627
Query: 364 FRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGK 423
+ ++ + TY +L+ Y+++ + EK I +++ +G++P++ + T++ AYG+
Sbjct: 628 LSLMMENSINHSAATYNSLMHMYSRLGDCEKCESILTEIKSSGMRPDRYSYNTVIYAYGR 687
Query: 424 NKDFDSAVVWYKEMESCGFPPDQKAKNILL 453
A + EM+ G PD NI +
Sbjct: 688 KGQMKEASRLFSEMKCSGVKPDIVTYNIFI 717
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 99/428 (23%), Positives = 191/428 (44%), Gaps = 41/428 (9%)
Query: 92 WDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAE 151
++ +++ F L+ YGK +A VL M G PSVV++ +L+ AY + G + A
Sbjct: 286 FEPDKVTFNSLLDVYGKARKHEEAIGVLKRMENAGCTPSVVTYNSLISAYVKDGLLEEAL 345
Query: 152 AIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMI 211
+ + M+ G +P +TY ++ K A + ++ ++ P+ ++ +I
Sbjct: 346 ELKQEMEFRGMKPDVVTYTTLISGLDRVGKIDAALATYSEMV---RNGCSPNLCTYNALI 402
Query: 212 YMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMS-FETNY--KEVSKIYDQMQRAGLQ 268
++ G + + +F + G VT+N+L+S F N EVS ++ +M++AG
Sbjct: 403 KLHGVRGKFTEMMAVFDDLRSAGYVPDVVTWNTLLSVFGQNGLDSEVSGVFKEMKKAGYI 462
Query: 269 PDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTV 328
P+ +Y LI++Y + ++A+ +++ M++AG+ P YN +L A A G +QA +
Sbjct: 463 PERDTYVSLISSYSRCGLFDQAMEIYKRMIEAGIYPDISTYNAVLSALARGGRWEQAEKL 522
Query: 329 FKCMRRDRCSPDICSYTTMLSAYVNA---------------------------------- 354
F M C PD SY+++L AY NA
Sbjct: 523 FAEMVDRDCKPDELSYSSLLHAYANAKKLDKMKTLSEDIYAERIERHNWLVKTLVLVNNK 582
Query: 355 -SDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTI 413
+++ EK F+ L++ ++ ++ Y K ++K+ E+ M N I +
Sbjct: 583 VNNLPETEKAFQELRRRRCSLDINVLNAMVSIYGKNKMVKKVEEVLSLMMENSINHSAAT 642
Query: 414 FTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFN 473
+ ++M Y + D + E++S G PD+ + N ++ + EA+ L
Sbjct: 643 YNSLMHMYSRLGDCEKCESILTEIKSSGMRPDRYSYNTVIYAYGRKGQMKEASRLFSEMK 702
Query: 474 HPNNEPGI 481
+P I
Sbjct: 703 CSGVKPDI 710
Score = 129 bits (323), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 91/402 (22%), Positives = 188/402 (46%), Gaps = 12/402 (2%)
Query: 30 NWRRLMNQIEEVGSAVAVLR--SERTRGQPLPKDLVLGTLVRLKQLK-KWNVVSEVLEWL 86
+ L++ ++ VG A L SE R P L++L ++ K+ + V + L
Sbjct: 362 TYTTLISGLDRVGKIDAALATYSEMVRNGCSPNLCTYNALIKLHGVRGKFTEMMAVFDDL 421
Query: 87 RIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGR 146
R + + + + L++ +G+ G ++ V M K GY P ++ +L+ +Y R G
Sbjct: 422 RSAGYVP-DVVTWNTLLSVFGQNGLDSEVSGVFKEMKKAGYIPERDTYVSLISSYSRCGL 480
Query: 147 YKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKM 206
+ A I++RM +G P TY +L ++++AE++F ++D + KPD+
Sbjct: 481 FDQAMEIYKRMIEAGIYPDISTYNAVLSALARGGRWEQAEKLFAEMVDRD---CKPDELS 537
Query: 207 FHMMIYMYKKAGGYEKARKLFA-LMAERGVQQSTVTYNSLMSFET---NYKEVSKIYDQM 262
+ +++ Y A +K + L + AER +++ +L+ N E K + ++
Sbjct: 538 YSSLLHAYANAKKLDKMKTLSEDIYAER-IERHNWLVKTLVLVNNKVNNLPETEKAFQEL 596
Query: 263 QRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMV 322
+R D+ +++ YGK + ++ V M++ + + YN L+ ++ G
Sbjct: 597 RRRRCSLDINVLNAMVSIYGKNKMVKKVEEVLSLMMENSINHSAATYNSLMHMYSRLGDC 656
Query: 323 DQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTL 382
++ ++ ++ PD SY T++ AY M+ A + F +K G P+++TY
Sbjct: 657 EKCESILTEIKSSGMRPDRYSYNTVIYAYGRKGQMKEASRLFSEMKCSGVKPDIVTYNIF 716
Query: 383 IKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKN 424
IK Y E+ +++ + G +PN+ F +I+ Y ++
Sbjct: 717 IKSYVANIMFEEAIDLVRYLVTQGCRPNERTFNSILQGYSRH 758
>gi|255540069|ref|XP_002511099.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223550214|gb|EEF51701.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 1151
Score = 155 bits (393), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 99/371 (26%), Positives = 186/371 (50%), Gaps = 10/371 (2%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
LI Y K G+ KA M +G P V +H+ L+ + G+ + A +F + G
Sbjct: 588 LIDGYCKDGNTTKAFAKFRCMLDQGVLPDVQTHSVLIHGLSKNGKLQEAMGVFSELLDKG 647
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
P TY ++ + K A E+ D K + P+ ++ +I K G
Sbjct: 648 LVPDVFTYTSLISNLCKEGDLKAAFELHD---DMCKKGINPNIVTYNALINGLCKLGEIA 704
Query: 222 KARKLFALMAERGVQQSTVTYNSLMSF---ETNYKEVSKIYDQMQRAGLQPDVVSYALLI 278
KAR+LF + E+G+ +++VTY+++++ N E +++ M+ G+ PD Y LI
Sbjct: 705 KARELFDGIPEKGLARNSVTYSTIIAGYCKSANLTEAFQLFHGMKLVGVPPDSFVYCALI 764
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCS 338
+ KA E+AL++F M++ G+ T A+N L+D F G + +A + + M + +
Sbjct: 765 DGCCKAGNTEKALSLFLGMVEEGIAST-PAFNALIDGFFKLGKLIEAYQLVEDMVDNHIT 823
Query: 339 PDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEI 398
P+ +YT ++ + +++ AE+ F +++ +PNV+TY +L+ GY ++ +M +
Sbjct: 824 PNHVTYTILIEYHCTVGNIKEAEQLFMEMQKRNVMPNVLTYTSLLHGYNRIGRRSEMFSL 883
Query: 399 YDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKT 458
+D+M GIKP+ ++ ++DA+ K ++ A+ +M S G KN+ L
Sbjct: 884 FDEMVARGIKPDDLAWSVMVDAHLKEGNWIKALKLVDDMLSEGV---NVCKNLYTILIDA 940
Query: 459 ADERNEANELL 469
+ N +E+L
Sbjct: 941 LCKHNNLSEVL 951
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 97/391 (24%), Positives = 172/391 (43%), Gaps = 41/391 (10%)
Query: 94 FNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAY------------ 141
N + LI K GD KAE + S M G P + ++ L+E Y
Sbjct: 370 LNTFTYYALIHGLCKIGDLEKAEDLFSEMTMMGIKPDIQTYNCLIEGYYKVQNMEKAYEL 429
Query: 142 -----------------------GRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVE 178
G A +F+ M S G +P+ + Y I+K V+
Sbjct: 430 LIEIKKENLTANAYMCGAIVNGLCHCGDLTRANELFQEMISWGLKPNIVIYTTIVKGLVK 489
Query: 179 ANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQS 238
+F+EA ++ + D+ L PD ++ +I + KAG E+ + M +G++ +
Sbjct: 490 EGRFEEAIKILGVMKDQ---GLSPDVFCYNTVIIGFCKAGKMEEGKSYLVEMIAKGLKPN 546
Query: 239 TVTYNSLMSFETNYKEVS---KIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFE 295
TY + + E+ + + +M +G+ P+ V LI+ Y K +A A F
Sbjct: 547 VYTYGAFIHGYCRAGEMQAAERSFIEMLDSGIAPNDVICTDLIDGYCKDGNTTKAFAKFR 606
Query: 296 EMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNAS 355
MLD GV P + +++L+ + +G + +A VF + PD+ +YT+++S
Sbjct: 607 CMLDQGVLPDVQTHSVLIHGLSKNGKLQEAMGVFSELLDKGLVPDVFTYTSLISNLCKEG 666
Query: 356 DMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFT 415
D++ A + + + G PN++TY LI G K+ + K E++D + G+ N ++
Sbjct: 667 DLKAAFELHDDMCKKGINPNIVTYNALINGLCKLGEIAKARELFDGIPEKGLARNSVTYS 726
Query: 416 TIMDAYGKNKDFDSAVVWYKEMESCGFPPDQ 446
TI+ Y K+ + A + M+ G PPD
Sbjct: 727 TIIAGYCKSANLTEAFQLFHGMKLVGVPPDS 757
Score = 134 bits (338), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 79/339 (23%), Positives = 160/339 (47%), Gaps = 6/339 (1%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
++ GD +A ++ M G P++V +T +++ + GR++ A I M+ G
Sbjct: 448 IVNGLCHCGDLTRANELFQEMISWGLKPNIVIYTTIVKGLVKEGRFEEAIKILGVMKDQG 507
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
P Y ++ F +A K +E + + ++ + LKP+ + I+ Y +AG +
Sbjct: 508 LSPDVFCYNTVIIGFCKAGKMEEGKSYLVEMIAK---GLKPNVYTYGAFIHGYCRAGEMQ 564
Query: 222 KARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSKIYDQ---MQRAGLQPDVVSYALLI 278
A + F M + G+ + V L+ +K + + M G+ PDV ++++LI
Sbjct: 565 AAERSFIEMLDSGIAPNDVICTDLIDGYCKDGNTTKAFAKFRCMLDQGVLPDVQTHSVLI 624
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCS 338
+ K + +EA+ VF E+LD G+ P Y L+ G + A + M + +
Sbjct: 625 HGLSKNGKLQEAMGVFSELLDKGLVPDVFTYTSLISNLCKEGDLKAAFELHDDMCKKGIN 684
Query: 339 PDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEI 398
P+I +Y +++ ++ A + F + + G N +TY T+I GY K NL + ++
Sbjct: 685 PNIVTYNALINGLCKLGEIAKARELFDGIPEKGLARNSVTYSTIIAGYCKSANLTEAFQL 744
Query: 399 YDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEM 437
+ M++ G+ P+ ++ ++D K + + A+ + M
Sbjct: 745 FHGMKLVGVPPDSFVYCALIDGCCKAGNTEKALSLFLGM 783
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 92/390 (23%), Positives = 172/390 (44%), Gaps = 7/390 (1%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + + ++ K+G F +A K+L M +G +P V + ++ + + G+ + ++
Sbjct: 476 NIVIYTTIVKGLVKEGRFEEAIKILGVMKDQGLSPDVFCYNTVIIGFCKAGKMEEGKSYL 535
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
M + G +P+ TY + + A + + AE F+ +LD S + P+ + +I Y
Sbjct: 536 VEMIAKGLKPNVYTYGAFIHGYCRAGEMQAAERSFIEMLD---SGIAPNDVICTDLIDGY 592
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSL---MSFETNYKEVSKIYDQMQRAGLQPDV 271
K G KA F M ++GV T++ L +S +E ++ ++ GL PDV
Sbjct: 593 CKDGNTTKAFAKFRCMLDQGVLPDVQTHSVLIHGLSKNGKLQEAMGVFSELLDKGLVPDV 652
Query: 272 VSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKC 331
+Y LI+ K + A + ++M G+ P YN L++ G + +AR +F
Sbjct: 653 FTYTSLISNLCKEGDLKAAFELHDDMCKKGINPNIVTYNALINGLCKLGEIAKARELFDG 712
Query: 332 MRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNN 391
+ + + +Y+T+++ Y ++++ A + F +K G P+ Y LI G K N
Sbjct: 713 IPEKGLARNSVTYSTIIAGYCKSANLTEAFQLFHGMKLVGVPPDSFVYCALIDGCCKAGN 772
Query: 392 LEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNI 451
EK + ++ M GI F ++D + K A ++M P+ I
Sbjct: 773 TEKALSLFLGMVEEGIASTPA-FNALIDGFFKLGKLIEAYQLVEDMVDNHITPNHVTYTI 831
Query: 452 LLSLAKTADERNEANELLGNFNHPNNEPGI 481
L+ T EA +L N P +
Sbjct: 832 LIEYHCTVGNIKEAEQLFMEMQKRNVMPNV 861
Score = 118 bits (295), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 94/409 (22%), Positives = 169/409 (41%), Gaps = 50/409 (12%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + + ++I + GD ++A ++ M KG P + L++ + R R +++
Sbjct: 266 NLVTYSVVIAGLCRAGDVDEALELKRSMANKGLLPDNYIYATLIDGFCRQKRSTEGKSML 325
Query: 155 RRMQSSGPRPSALTYQIILKLFVE----ANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMM 210
M + G +P + Y ++ FV+ F+ EE+F +K + ++ +
Sbjct: 326 DEMYTMGLKPDHVAYTALINGFVKQSDIGGAFQVKEEMF-------ARKIKLNTFTYYAL 378
Query: 211 IYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLM-------SFETNYK---EVSK--- 257
I+ K G EKA LF+ M G++ TYN L+ + E Y+ E+ K
Sbjct: 379 IHGLCKIGDLEKAEDLFSEMTMMGIKPDIQTYNCLIEGYYKVQNMEKAYELLIEIKKENL 438
Query: 258 -------------------------IYDQMQRAGLQPDVVSYALLINAYGKARREEEALA 292
++ +M GL+P++V Y ++ K R EEA+
Sbjct: 439 TANAYMCGAIVNGLCHCGDLTRANELFQEMISWGLKPNIVIYTTIVKGLVKEGRFEEAIK 498
Query: 293 VFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYV 352
+ M D G+ P YN ++ F +G +++ ++ M P++ +Y + Y
Sbjct: 499 ILGVMKDQGLSPDVFCYNTVIIGFCKAGKMEEGKSYLVEMIAKGLKPNVYTYGAFIHGYC 558
Query: 353 NASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQT 412
A +M+ AE+ F + G PN + LI GY K N K + M G+ P+
Sbjct: 559 RAGEMQAAERSFIEMLDSGIAPNDVICTDLIDGYCKDGNTTKAFAKFRCMLDQGVLPDVQ 618
Query: 413 IFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLS-LAKTAD 460
+ ++ KN A+ + E+ G PD L+S L K D
Sbjct: 619 THSVLIHGLSKNGKLQEAMGVFSELLDKGLVPDVFTYTSLISNLCKEGD 667
Score = 115 bits (289), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 89/358 (24%), Positives = 155/358 (43%), Gaps = 7/358 (1%)
Query: 99 FLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQ 158
F +LI Y K+G N+A V + + +L + +G R + +++ M
Sbjct: 166 FEILIDIYRKKGFLNEAVSVFLGAKTNEFIVGLACCNSLSKDLLKGNRVELFWKVYKGML 225
Query: 159 SSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAG 218
+ P TY ++ + K +E + V L D E+ P+ + ++I +AG
Sbjct: 226 GA-IVPDVYTYTNLINAYCRVGKVEEGKHV---LFDMEEKGCIPNLVTYSVVIAGLCRAG 281
Query: 219 GYEKARKLFALMAERGVQQSTVTYNSLMSFETNYK---EVSKIYDQMQRAGLQPDVVSYA 275
++A +L MA +G+ Y +L+ K E + D+M GL+PD V+Y
Sbjct: 282 DVDEALELKRSMANKGLLPDNYIYATLIDGFCRQKRSTEGKSMLDEMYTMGLKPDHVAYT 341
Query: 276 LLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRD 335
LIN + K A V EEM ++ Y L+ G +++A +F M
Sbjct: 342 ALINGFVKQSDIGGAFQVKEEMFARKIKLNTFTYYALIHGLCKIGDLEKAEDLFSEMTMM 401
Query: 336 RCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKM 395
PDI +Y ++ Y +ME A + +K++ N G ++ G +L +
Sbjct: 402 GIKPDIQTYNCLIEGYYKVQNMEKAYELLIEIKKENLTANAYMCGAIVNGLCHCGDLTRA 461
Query: 396 MEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILL 453
E++ +M G+KPN I+TTI+ K F+ A+ M+ G PD N ++
Sbjct: 462 NELFQEMISWGLKPNIVIYTTIVKGLVKEGRFEEAIKILGVMKDQGLSPDVFCYNTVI 519
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 76/340 (22%), Positives = 153/340 (45%), Gaps = 44/340 (12%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
LI+ K+GD A ++ M KKG P++V++ AL+ + G A +F + G
Sbjct: 658 LISNLCKEGDLKAAFELHDDMCKKGINPNIVTYNALINGLCKLGEIAKARELFDGIPEKG 717
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
+++TY I+ + ++ EA ++F + + + PD ++ +I KAG E
Sbjct: 718 LARNSVTYSTIIAGYCKSANLTEAFQLFHGM---KLVGVPPDSFVYCALIDGCCKAGNTE 774
Query: 222 KARKLFALMAERGVQQST----------------------------------VTYNSLMS 247
KA LF M E G+ + VTY L+
Sbjct: 775 KALSLFLGMVEEGIASTPAFNALIDGFFKLGKLIEAYQLVEDMVDNHITPNHVTYTILIE 834
Query: 248 FET---NYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRP 304
+ N KE +++ +MQ+ + P+V++Y L++ Y + R E ++F+EM+ G++P
Sbjct: 835 YHCTVGNIKEAEQLFMEMQKRNVMPNVLTYTSLLHGYNRIGRRSEMFSLFDEMVARGIKP 894
Query: 305 THKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICS--YTTMLSAYVNASDMEGAEK 362
A+++++DA G +A + M + ++C YT ++ A +++ K
Sbjct: 895 DDLAWSVMVDAHLKEGNWIKALKLVDDMLSE--GVNVCKNLYTILIDALCKHNNLSEVLK 952
Query: 363 FFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKM 402
+++ G ++ T GTL+ + + ++ + + + M
Sbjct: 953 VLDEVEKQGSKLSLATCGTLVCCFHRAGRTDEALRVLESM 992
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 53/226 (23%), Positives = 108/226 (47%), Gaps = 7/226 (3%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + + +I Y K + +A ++ M G P + AL++ + G + A ++F
Sbjct: 721 NSVTYSTIIAGYCKSANLTEAFQLFHGMKLVGVPPDSFVYCALIDGCCKAGNTEKALSLF 780
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
M G S + ++ F + K EA ++ ++D + P+ + ++I +
Sbjct: 781 LGMVEEGI-ASTPAFNALIDGFFKLGKLIEAYQLVEDMVDNH---ITPNHVTYTILIEYH 836
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNY---KEVSKIYDQMQRAGLQPDV 271
G ++A +LF M +R V + +TY SL+ E+ ++D+M G++PD
Sbjct: 837 CTVGNIKEAEQLFMEMQKRNVMPNVLTYTSLLHGYNRIGRRSEMFSLFDEMVARGIKPDD 896
Query: 272 VSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFA 317
++++++++A+ K +AL + ++ML GV Y IL+DA
Sbjct: 897 LAWSVMVDAHLKEGNWIKALKLVDDMLSEGVNVCKNLYTILIDALC 942
Score = 82.0 bits (201), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 91/407 (22%), Positives = 165/407 (40%), Gaps = 76/407 (18%)
Query: 77 NVVSEVLEWLRIQSWWDFNEM---------DFLMLITAYGKQGDFNKAEKVLSFMNKKG- 126
N V E+ L+ ++W E D + L+ + D + +++N +
Sbjct: 43 NTVKEITSLLKQKNWQFLIESSPLPNKLNPDVVFLVIKQNQVIDPKRLHGFFNWVNSRTV 102
Query: 127 YAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAE 186
++ ++ + + L G + NA + RM + P I+K + E N +
Sbjct: 103 FSQNLSTFSILSLILCNSGLFGNAANVLERMIDT-RNPHVKILDSIIKCYKEINGSSSSS 161
Query: 187 EVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLM 246
+F ++I +Y+K G +A +F NSL
Sbjct: 162 S----------------VVVFEILIDIYRKKGFLNEAVSVFLGAKTNEFIVGLACCNSLS 205
Query: 247 S--FETNYKEVS-KIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVR 303
+ N E+ K+Y M A + PDV +Y LINAY + + EE V +M + G
Sbjct: 206 KDLLKGNRVELFWKVYKGMLGA-IVPDVYTYTNLINAYCRVGKVEEGKHVLFDMEEKGCI 264
Query: 304 PTHKAYNILLDAFAISGMVDQARTVFKCM--------------------RRDRCS----- 338
P Y++++ +G VD+A + + M R+ R +
Sbjct: 265 PNLVTYSVVIAGLCRAGDVDEALELKRSMANKGLLPDNYIYATLIDGFCRQKRSTEGKSM 324
Query: 339 ----------PDICSYTTMLSAYVNASDMEGA-----EKFFRRLKQDGFVPNVITYGTLI 383
PD +YT +++ +V SD+ GA E F R++K + F TY LI
Sbjct: 325 LDEMYTMGLKPDHVAYTALINGFVKQSDIGGAFQVKEEMFARKIKLNTF-----TYYALI 379
Query: 384 KGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSA 430
G K+ +LEK +++ +M + GIKP+ + +++ Y K ++ + A
Sbjct: 380 HGLCKIGDLEKAEDLFSEMTMMGIKPDIQTYNCLIEGYYKVQNMEKA 426
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 48/207 (23%), Positives = 86/207 (41%), Gaps = 41/207 (19%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + + +LI + G+ +AE++ M K+ P+V+++T+L+ Y R GR ++F
Sbjct: 825 NHVTYTILIEYHCTVGNIKEAEQLFMEMQKRNVMPNVLTYTSLLHGYNRIGRRSEMFSLF 884
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
M + G +P L + + M+ +
Sbjct: 885 DEMVARGIKPDDLAWSV--------------------------------------MVDAH 906
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSL---MSFETNYKEVSKIYDQMQRAGLQPDV 271
K G + KA KL M GV Y L + N EV K+ D++++ G + +
Sbjct: 907 LKEGNWIKALKLVDDMLSEGVNVCKNLYTILIDALCKHNNLSEVLKVLDEVEKQGSKLSL 966
Query: 272 VSYALLINAYGKARREEEALAVFEEML 298
+ L+ + +A R +EAL V E M+
Sbjct: 967 ATCGTLVCCFHRAGRTDEALRVLESMV 993
>gi|147810269|emb|CAN75824.1| hypothetical protein VITISV_004157 [Vitis vinifera]
Length = 1512
Score = 155 bits (393), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 103/382 (26%), Positives = 179/382 (46%), Gaps = 6/382 (1%)
Query: 101 MLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSS 160
M+I A K G +A + S M G P VV +++LM+ R GR K A F+ M+
Sbjct: 1090 MIIDALCKDGMTTEALDMFSEMIGAGILPDVVVYSSLMDGLCRFGRLKEALEFFKEMEGR 1149
Query: 161 GPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGY 220
G TY ++ A +KE ++D SP D F ++I K G
Sbjct: 1150 GISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGFSP---DAFTFTILIDGLCKEGKV 1206
Query: 221 EKARKLFALMAERGVQQSTVTYNSLM---SFETNYKEVSKIYDQMQRAGLQPDVVSYALL 277
+A+++ LM +G + +TYN+LM ++ +K+++ + G++ +V SY +L
Sbjct: 1207 GEAQQILELMRHKGKEPDILTYNTLMNGLCLVGQLEDATKLFESLADRGIKLNVFSYNIL 1266
Query: 278 INAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRC 337
IN Y K ++ +EA FEEM G++P+ YN L+ A SG V A+ +F M+
Sbjct: 1267 INGYCKDQKIDEAFRFFEEMRPKGLKPSTVTYNTLIGALCQSGRVRTAQKLFVEMQTCGQ 1326
Query: 338 SPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMME 397
+ +Y +L +E A F+ +K+ PN+ + L+ G + LE+ +
Sbjct: 1327 FLKLSTYCVLLDGLCKNGHLEEAMDLFQSIKKTEHKPNIEVFSILLDGMCRAGKLEEAWK 1386
Query: 398 IYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAK 457
+D++ NG++P+ + +++ AV +ME G PD N+++
Sbjct: 1387 QFDEISKNGLEPDTIAYNILINGLCNKGMLSEAVKLLWQMEEKGCLPDSITFNVIIQNLL 1446
Query: 458 TADERNEANELLGNFNHPNNEP 479
+E +EA +LL + N P
Sbjct: 1447 KENEIHEAIQLLEEMRNRNFSP 1468
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 89/351 (25%), Positives = 165/351 (47%), Gaps = 9/351 (2%)
Query: 112 FNKAEKVLSF---MNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALT 168
F + ++ L F M +G + V ++ +L+ R G +K M G P A T
Sbjct: 1133 FGRLKEALEFFKEMEGRGISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGFSPDAFT 1192
Query: 169 YQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFA 228
+ I++ + K EA+++ + + K +PD ++ ++ G E A KLF
Sbjct: 1193 FTILIDGLCKEGKVGEAQQILELMRHKGK---EPDILTYNTLMNGLCLVGQLEDATKLFE 1249
Query: 229 LMAERGVQQSTVTYNSLMSF---ETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKAR 285
+A+RG++ + +YN L++ + E + +++M+ GL+P V+Y LI A ++
Sbjct: 1250 SLADRGIKLNVFSYNILINGYCKDQKIDEAFRFFEEMRPKGLKPSTVTYNTLIGALCQSG 1309
Query: 286 REEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYT 345
R A +F EM G Y +LLD +G +++A +F+ +++ P+I ++
Sbjct: 1310 RVRTAQKLFVEMQTCGQFLKLSTYCVLLDGLCKNGHLEEAMDLFQSIKKTEHKPNIEVFS 1369
Query: 346 TMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVN 405
+L A +E A K F + ++G P+ I Y LI G L + +++ +M
Sbjct: 1370 ILLDGMCRAGKLEEAWKQFDEISKNGLEPDTIAYNILINGLCNKGMLSEAVKLLWQMEEK 1429
Query: 406 GIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLA 456
G P+ F I+ K + A+ +EM + F PD+ ++LL LA
Sbjct: 1430 GCLPDSITFNVIIQNLLKENEIHEAIQLLEEMRNRNFSPDEAVTSMLLCLA 1480
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 98/369 (26%), Positives = 164/369 (44%), Gaps = 7/369 (1%)
Query: 124 KKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFK 183
K+G+ P V+ T L++ +A +F M G A TY I++ +A K
Sbjct: 1009 KRGFEPDAVTVTTLVKGVWMENGIPDAVQLFDEMTKKGLLGDAKTYGILINGLCKARKTG 1068
Query: 184 EAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYN 243
A + L ++ K K D + M+I K G +A +F+ M G+ V Y+
Sbjct: 1069 LA----IKLHEKMKGNCKGDVFTYGMIIDALCKDGMTTEALDMFSEMIGAGILPDVVVYS 1124
Query: 244 SLMSFETNY---KEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDA 300
SLM + KE + + +M+ G+ DV +Y LI+ +A +E M+D
Sbjct: 1125 SLMDGLCRFGRLKEALEFFKEMEGRGISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDR 1184
Query: 301 GVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGA 360
G P + IL+D G V +A+ + + MR PDI +Y T+++ +E A
Sbjct: 1185 GFSPDAFTFTILIDGLCKEGKVGEAQQILELMRHKGKEPDILTYNTLMNGLCLVGQLEDA 1244
Query: 361 EKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDA 420
K F L G NV +Y LI GY K +++ +++MR G+KP+ + T++ A
Sbjct: 1245 TKLFESLADRGIKLNVFSYNILINGYCKDQKIDEAFRFFEEMRPKGLKPSTVTYNTLIGA 1304
Query: 421 YGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPG 480
++ +A + EM++CG +LL EA +L + ++P
Sbjct: 1305 LCQSGRVRTAQKLFVEMQTCGQFLKLSTYCVLLDGLCKNGHLEEAMDLFQSIKKTEHKPN 1364
Query: 481 INGLSISVD 489
I SI +D
Sbjct: 1365 IEVFSILLD 1373
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 75/334 (22%), Positives = 165/334 (49%), Gaps = 6/334 (1%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
LI + G + + L+ M +G++P + T L++ + G+ A+ I M+ G
Sbjct: 1161 LIHGLSRAGLWKEVTWFLNLMVDRGFSPDAFTFTILIDGLCKEGKVGEAQQILELMRHKG 1220
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
P LTY ++ + ++A ++F +L D +K + ++++I Y K +
Sbjct: 1221 KEPDILTYNTLMNGLCLVGQLEDATKLFESLADRG---IKLNVFSYNILINGYCKDQKID 1277
Query: 222 KARKLFALMAERGVQQSTVTYNSLMSFETNYKEV---SKIYDQMQRAGLQPDVVSYALLI 278
+A + F M +G++ STVTYN+L+ V K++ +MQ G + +Y +L+
Sbjct: 1278 EAFRFFEEMRPKGLKPSTVTYNTLIGALCQSGRVRTAQKLFVEMQTCGQFLKLSTYCVLL 1337
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCS 338
+ K EEA+ +F+ + +P + ++ILLD +G +++A F + ++
Sbjct: 1338 DGLCKNGHLEEAMDLFQSIKKTEHKPNIEVFSILLDGMCRAGKLEEAWKQFDEISKNGLE 1397
Query: 339 PDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEI 398
PD +Y +++ N + A K ++++ G +P+ IT+ +I+ K N + + +++
Sbjct: 1398 PDTIAYNILINGLCNKGMLSEAVKLLWQMEEKGCLPDSITFNVIIQNLLKENEIHEAIQL 1457
Query: 399 YDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVV 432
++MR P++ + + ++ + + +A+V
Sbjct: 1458 LEEMRNRNFSPDEAVTSMLLCLASFDPQWHAALV 1491
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 73/280 (26%), Positives = 135/280 (48%), Gaps = 13/280 (4%)
Query: 40 EVGSAVAVLRSERTRGQP---LPKDLVLGTLVRLKQLKKWNVVSEVLEWLRIQSWWDFNE 96
+VG A +L R +G+ L + ++ L + QL+ + E L I+ N
Sbjct: 1205 KVGEAQQILELMRHKGKEPDILTYNTLMNGLCLVGQLEDATKLFESLADRGIK----LNV 1260
Query: 97 MDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRR 156
+ +LI Y K ++A + M KG PS V++ L+ A + GR + A+ +F
Sbjct: 1261 FSYNILINGYCKDQKIDEAFRFFEEMRPKGLKPSTVTYNTLIGALCQSGRVRTAQKLFVE 1320
Query: 157 MQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKK 216
MQ+ G TY ++L + +EA ++F ++ +K+ KP+ ++F +++ +
Sbjct: 1321 MQTCGQFLKLSTYCVLLDGLCKNGHLEEAMDLFQSI---KKTEHKPNIEVFSILLDGMCR 1377
Query: 217 AGGYEKARKLFALMAERGVQQSTVTYNSLMSFETN---YKEVSKIYDQMQRAGLQPDVVS 273
AG E+A K F +++ G++ T+ YN L++ N E K+ QM+ G PD ++
Sbjct: 1378 AGKLEEAWKQFDEISKNGLEPDTIAYNILINGLCNKGMLSEAVKLLWQMEEKGCLPDSIT 1437
Query: 274 YALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILL 313
+ ++I K EA+ + EEM + P ++LL
Sbjct: 1438 FNVIIQNLLKENEIHEAIQLLEEMRNRNFSPDEAVTSMLL 1477
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/300 (20%), Positives = 113/300 (37%), Gaps = 46/300 (15%)
Query: 238 STVTYNSLMSFETN---YKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREE------ 288
T T+N L++ Y V +Y ++ G+QPD+ + +LI+ R
Sbjct: 945 CTDTFNHLLASVAKLGYYSTVFPMYRKINDVGIQPDLYTLNILIHCCCSLRAVGCGFGVF 1004
Query: 289 -----------------------------EALAVFEEMLDAGVRPTHKAYNILLDAFAIS 319
+A+ +F+EM G+ K Y IL++ +
Sbjct: 1005 GGFLKRGFEPDAVTVTTLVKGVWMENGIPDAVQLFDEMTKKGLLGDAKTYGILINGLCKA 1064
Query: 320 GMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITY 379
A + + M+ + C D+ +Y ++ A A F + G +P+V+ Y
Sbjct: 1065 RKTGLAIKLHEKMKGN-CKGDVFTYGMIIDALCKDGMTTEALDMFSEMIGAGILPDVVVY 1123
Query: 380 GTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMES 439
+L+ G + L++ +E + +M GI + + +++ + + + M
Sbjct: 1124 SSLMDGLCRFGRLKEALEFFKEMEGRGISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVD 1183
Query: 440 CGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGI-------NGLSISVDEED 492
GF PD IL+ + EA ++L H EP I NGL + ED
Sbjct: 1184 RGFSPDAFTFTILIDGLCKEGKVGEAQQILELMRHKGKEPDILTYNTLMNGLCLVGQLED 1243
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/189 (22%), Positives = 80/189 (42%), Gaps = 1/189 (0%)
Query: 257 KIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAF 316
K++D+ + P ++ L+ + K ++ ++ D G++P NIL+
Sbjct: 932 KLFDRSLCSEPMPCTDTFNHLLASVAKLGYYSTVFPMYRKINDVGIQPDLYTLNILIHCC 991
Query: 317 AISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNV 376
V VF + PD + TT++ + + A + F + + G + +
Sbjct: 992 CSLRAVGCGFGVFGGFLKRGFEPDAVTVTTLVKGVWMENGIPDAVQLFDEMTKKGLLGDA 1051
Query: 377 ITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKE 436
TYG LI G K +++++KM+ N K + + I+DA K+ A+ + E
Sbjct: 1052 KTYGILINGLCKARKTGLAIKLHEKMKGN-CKGDVFTYGMIIDALCKDGMTTEALDMFSE 1110
Query: 437 MESCGFPPD 445
M G PD
Sbjct: 1111 MIGAGILPD 1119
>gi|357130030|ref|XP_003566661.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
distachyon]
Length = 827
Score = 155 bits (393), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 96/384 (25%), Positives = 183/384 (47%), Gaps = 12/384 (3%)
Query: 74 KKWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVS 133
K N+ +E+++ + +N ++ A K +KAE VL M KG P V+
Sbjct: 250 KACNLFNEMVQKGVVPDVGTYNS-----IVDALCKARAMDKAEFVLRQMVDKGVEPDGVT 304
Query: 134 HTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLL 193
+ A++ Y G +K + +FR+M S G P +T+ + + + K+AEE+F +
Sbjct: 305 YNAIIHGYSCSGHWKESAKMFRKMTSKGLIPDTVTFSSFMSSLCKHGRSKDAEEIFQYMT 364
Query: 194 DEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETN-- 251
+ PD + ++++ Y G + LF MA++G+ + N L+S
Sbjct: 365 TKGH---MPDIVSYSILLHGYATEGRFADMNNLFHSMADKGIVSNCHCINILISAHAKRG 421
Query: 252 -YKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYN 310
E ++ +MQ G++P+VV+Y+ LI+A+ + R +A+ F +M+ G+ P Y+
Sbjct: 422 MMDEAMLVFTEMQGQGVRPNVVTYSTLISAFCRMGRLADAMEKFSQMISIGIEPNTAVYH 481
Query: 311 ILLDAFAISG-MVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQ 369
L+ F + G +V + + M + P+I +++++ + + A+ F +
Sbjct: 482 SLIHGFCMHGDLVKAKEFISEMMSKGLHRPNIVFFSSIIHSLCIEGRVMDAQDVFNLVIH 541
Query: 370 DGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDS 429
G P ++T+ +LI GY V +EK + D M GI+P+ T++ Y K+ D
Sbjct: 542 IGDRPTIVTFNSLIDGYCLVGKMEKAFGVLDAMVSVGIEPDVVTNNTLVSGYCKSGKIDD 601
Query: 430 AVVWYKEMESCGFPPDQKAKNILL 453
++ ++EM P NI+L
Sbjct: 602 GLILFREMLHKKVKPTTVTYNIVL 625
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 87/305 (28%), Positives = 153/305 (50%), Gaps = 9/305 (2%)
Query: 122 MNKKG--YAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEA 179
M K+G +P VVS ++ + + G A +F M G P TY I+ +A
Sbjct: 221 MAKEGGRCSPDVVSFNTVIHGFFKQGEVSKACNLFNEMVQKGVVPDVGTYNSIVDALCKA 280
Query: 180 NKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQST 239
+AE V ++D+ ++PD ++ +I+ Y +G ++++ K+F M +G+ T
Sbjct: 281 RAMDKAEFVLRQMVDKG---VEPDGVTYNAIIHGYSCSGHWKESAKMFRKMTSKGLIPDT 337
Query: 240 VTYNSLMSFETNY---KEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEE 296
VT++S MS + K+ +I+ M G PD+VSY++L++ Y R + +F
Sbjct: 338 VTFSSFMSSLCKHGRSKDAEEIFQYMTTKGHMPDIVSYSILLHGYATEGRFADMNNLFHS 397
Query: 297 MLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASD 356
M D G+ NIL+ A A GM+D+A VF M+ P++ +Y+T++SA+
Sbjct: 398 MADKGIVSNCHCINILISAHAKRGMMDEAMLVFTEMQGQGVRPNVVTYSTLISAFCRMGR 457
Query: 357 MEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGI-KPNQTIFT 415
+ A + F ++ G PN Y +LI G+ +L K E +M G+ +PN F+
Sbjct: 458 LADAMEKFSQMISIGIEPNTAVYHSLIHGFCMHGDLVKAKEFISEMMSKGLHRPNIVFFS 517
Query: 416 TIMDA 420
+I+ +
Sbjct: 518 SIIHS 522
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 103/410 (25%), Positives = 181/410 (44%), Gaps = 46/410 (11%)
Query: 101 MLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSS 160
+LI+A+ K+G ++A V + M +G P+VV+++ L+ A+ R GR +A F +M S
Sbjct: 412 ILISAHAKRGMMDEAMLVFTEMQGQGVRPNVVTYSTLISAFCRMGRLADAMEKFSQMISI 471
Query: 161 GPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGY 220
G P+ Y ++ F +A+E ++ K +P+ F +I+ G
Sbjct: 472 GIEPNTAVYHSLIHGFCMHGDLVKAKEFISEMM--SKGLHRPNIVFFSSIIHSLCIEGRV 529
Query: 221 EKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSK------IYDQMQRAGLQPDVVSY 274
A+ +F L+ G + + VT+NSL+ Y V K + D M G++PDVV+
Sbjct: 530 MDAQDVFNLVIHIGDRPTIVTFNSLID---GYCLVGKMEKAFGVLDAMVSVGIEPDVVTN 586
Query: 275 ALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISG-------------- 320
L++ Y K+ + ++ L +F EML V+PT YNI+LD +G
Sbjct: 587 NTLVSGYCKSGKIDDGLILFREMLHKKVKPTTVTYNIVLDGLLRAGRTSAAKKMFHEMID 646
Query: 321 ---------------------MVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEG 359
+ D+A T+F + C DI TM++A E
Sbjct: 647 SGTAVDIDTYKILLKGLCRNDLTDEAITLFHKLGAMDCKFDITILNTMINALYKVRRREE 706
Query: 360 AEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMD 419
A F + G VPNV TYG +I+ K ++E+ ++ M +G P+ + I+
Sbjct: 707 ANDLFAAISTSGLVPNVSTYGVMIRNLLKEGSVEEADTMFSSMEKSGCAPSSRLLNDIIR 766
Query: 420 AYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELL 469
+ D A + +++ + ++L+SL + + E + L
Sbjct: 767 MLLQKGDIVKAGYYMSKVDGTIISLEASTTSLLMSLFSSKGKHREQIKFL 816
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 79/398 (19%), Positives = 174/398 (43%), Gaps = 7/398 (1%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
+ + F +++ K G AE++ +M KG+ P +VS++ L+ Y GR+ + +F
Sbjct: 336 DTVTFSSFMSSLCKHGRSKDAEEIFQYMTTKGHMPDIVSYSILLHGYATEGRFADMNNLF 395
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
M G + I++ + EA VF + + ++P+ + +I +
Sbjct: 396 HSMADKGIVSNCHCINILISAHAKRGMMDEAMLVFTEM---QGQGVRPNVVTYSTLISAF 452
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSK----IYDQMQRAGLQPD 270
+ G A + F+ M G++ +T Y+SL+ + ++ K I + M + +P+
Sbjct: 453 CRMGRLADAMEKFSQMISIGIEPNTAVYHSLIHGFCMHGDLVKAKEFISEMMSKGLHRPN 512
Query: 271 VVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFK 330
+V ++ +I++ R +A VF ++ G RPT +N L+D + + G +++A V
Sbjct: 513 IVFFSSIIHSLCIEGRVMDAQDVFNLVIHIGDRPTIVTFNSLIDGYCLVGKMEKAFGVLD 572
Query: 331 CMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVN 390
M PD+ + T++S Y + ++ FR + P +TY ++ G +
Sbjct: 573 AMVSVGIEPDVVTNNTLVSGYCKSGKIDDGLILFREMLHKKVKPTTVTYNIVLDGLLRAG 632
Query: 391 NLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKN 450
+++ +M +G + + ++ +N D A+ + ++ + D N
Sbjct: 633 RTSAAKKMFHEMIDSGTAVDIDTYKILLKGLCRNDLTDEAITLFHKLGAMDCKFDITILN 692
Query: 451 ILLSLAKTADERNEANELLGNFNHPNNEPGINGLSISV 488
+++ R EAN+L + P ++ + +
Sbjct: 693 TMINALYKVRRREEANDLFAAISTSGLVPNVSTYGVMI 730
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 86/360 (23%), Positives = 168/360 (46%), Gaps = 12/360 (3%)
Query: 128 AP-SVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAE 186
AP +V ++ LM+ R R A R+ +G + + LK A + EA
Sbjct: 120 APLTVRTYGILMDCCCRARRPDLGPAFVARLLRAGLKTGTIQATTFLKCLCHAKRTDEAV 179
Query: 187 EVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQS--TVTYNS 244
+V + + E PD ++ +I ++A + MA+ G + S V++N+
Sbjct: 180 DVLLHRMSELSC--VPDAISYNTVIKSLCGDSRSQEALDMVQRMAKEGGRCSPDVVSFNT 237
Query: 245 LMSFETNYKEVSK---IYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAG 301
++ EVSK ++++M + G+ PDV +Y +++A KAR ++A V +M+D G
Sbjct: 238 VIHGFFKQGEVSKACNLFNEMVQKGVVPDVGTYNSIVDALCKARAMDKAEFVLRQMVDKG 297
Query: 302 VRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAE 361
V P YN ++ ++ SG ++ +F+ M PD ++++ +S+ + AE
Sbjct: 298 VEPDGVTYNAIIHGYSCSGHWKESAKMFRKMTSKGLIPDTVTFSSFMSSLCKHGRSKDAE 357
Query: 362 KFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAY 421
+ F+ + G +P++++Y L+ GYA M ++ M GI N ++ A+
Sbjct: 358 EIFQYMTTKGHMPDIVSYSILLHGYATEGRFADMNNLFHSMADKGIVSNCHCINILISAH 417
Query: 422 GKNKDFDSAVVWYKEMESCGFPPDQKAKNILLS----LAKTADERNEANELLGNFNHPNN 477
K D A++ + EM+ G P+ + L+S + + AD + ++++ PN
Sbjct: 418 AKRGMMDEAMLVFTEMQGQGVRPNVVTYSTLISAFCRMGRLADAMEKFSQMISIGIEPNT 477
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 77/334 (23%), Positives = 148/334 (44%), Gaps = 5/334 (1%)
Query: 124 KKGYAPSVVSHTALMEAYGRGGRYKNA-EAIFRRMQSSGPRPSALTYQIILKLFVEANKF 182
+ G + T ++ R A + + RM P A++Y ++K ++
Sbjct: 152 RAGLKTGTIQATTFLKCLCHAKRTDEAVDVLLHRMSELSCVPDAISYNTVIKSLCGDSRS 211
Query: 183 KEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTY 242
+EA ++ + + +E PD F+ +I+ + K G KA LF M ++GV TY
Sbjct: 212 QEALDM-VQRMAKEGGRCSPDVVSFNTVIHGFFKQGEVSKACNLFNEMVQKGVVPDVGTY 270
Query: 243 NSLMSFETNYKEVSK---IYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLD 299
NS++ + + K + QM G++PD V+Y +I+ Y + +E+ +F +M
Sbjct: 271 NSIVDALCKARAMDKAEFVLRQMVDKGVEPDGVTYNAIIHGYSCSGHWKESAKMFRKMTS 330
Query: 300 AGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEG 359
G+ P ++ + + G A +F+ M PDI SY+ +L Y
Sbjct: 331 KGLIPDTVTFSSFMSSLCKHGRSKDAEEIFQYMTTKGHMPDIVSYSILLHGYATEGRFAD 390
Query: 360 AEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMD 419
F + G V N LI +AK +++ M ++ +M+ G++PN ++T++
Sbjct: 391 MNNLFHSMADKGIVSNCHCINILISAHAKRGMMDEAMLVFTEMQGQGVRPNVVTYSTLIS 450
Query: 420 AYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILL 453
A+ + A+ + +M S G P+ + L+
Sbjct: 451 AFCRMGRLADAMEKFSQMISIGIEPNTAVYHSLI 484
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/229 (21%), Positives = 100/229 (43%), Gaps = 3/229 (1%)
Query: 261 QMQRAGLQPDVVSYALLINAYGKARREEEALAVF-EEMLDAGVRPTHKAYNILLDAFAIS 319
++ RAGL+ + + A+R +EA+ V M + P +YN ++ +
Sbjct: 149 RLLRAGLKTGTIQATTFLKCLCHAKRTDEAVDVLLHRMSELSCVPDAISYNTVIKSLCGD 208
Query: 320 GMVDQARTVFKCMRRD--RCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVI 377
+A + + M ++ RCSPD+ S+ T++ + ++ A F + Q G VP+V
Sbjct: 209 SRSQEALDMVQRMAKEGGRCSPDVVSFNTVIHGFFKQGEVSKACNLFNEMVQKGVVPDVG 268
Query: 378 TYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEM 437
TY +++ K ++K + +M G++P+ + I+ Y + + + +++M
Sbjct: 269 TYNSIVDALCKARAMDKAEFVLRQMVDKGVEPDGVTYNAIIHGYSCSGHWKESAKMFRKM 328
Query: 438 ESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGINGLSI 486
S G PD + +S +A E+ + P I SI
Sbjct: 329 TSKGLIPDTVTFSSFMSSLCKHGRSKDAEEIFQYMTTKGHMPDIVSYSI 377
>gi|115474441|ref|NP_001060817.1| Os08g0110200 [Oryza sativa Japonica Group]
gi|42408384|dbj|BAD09535.1| putative PPR protein [Oryza sativa Japonica Group]
gi|113622786|dbj|BAF22731.1| Os08g0110200 [Oryza sativa Japonica Group]
gi|125601950|gb|EAZ41275.1| hypothetical protein OsJ_25782 [Oryza sativa Japonica Group]
Length = 798
Score = 155 bits (393), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 100/372 (26%), Positives = 176/372 (47%), Gaps = 11/372 (2%)
Query: 94 FNEM------DFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRY 147
FN M + ++I + G + A L + + G+ ++ + L++ R
Sbjct: 88 FNRMPRADLCTYSIVIGCCSRAGHLDLAFAALGRVIRTGWTAQAITFSPLLKGLCHDKRT 147
Query: 148 KNAEAI-FRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLL-DEEKSPLKPDQK 205
+A I RRM + G P+A +Y I+LK + N+ ++A + T++ D+ + PD
Sbjct: 148 SDAMDIALRRMPALGCTPNAFSYNILLKGLCDENRSQQALHLLHTMMADDTRGGCPPDVV 207
Query: 206 MFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNY---KEVSKIYDQM 262
+ +I + G +KA LF M ++G+ + +TYN L+ + KE I+ +M
Sbjct: 208 SYTTVINGLLREGQLDKAYCLFDEMLDQGMSPNCITYNCLLHGYCSSGKPKEAIGIFRKM 267
Query: 263 QRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMV 322
R G++PDVV+Y L+ K R EA VF+ M+ G +P Y LL +A G +
Sbjct: 268 CRDGVEPDVVTYNTLMVYLCKNGRSMEARKVFDSMVKKGHKPDSSIYGTLLHGYATEGYL 327
Query: 323 DQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTL 382
Q + M R+ PD + ++ AY ++ A F +++Q G PN++TYGT+
Sbjct: 328 VQMHQLLDVMVRNGTQPDHYIFNILIGAYAKHGMVDEAMLAFSKMRQQGLHPNIVTYGTV 387
Query: 383 IKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGF 442
+ +V ++ M +D++ G+ PN +F T++ +D A EM G
Sbjct: 388 MDALCRVGKVDDAMSQFDRLISEGLTPNGVVFRTLIHGLCACDKWDKAEELAVEMIGRGI 447
Query: 443 PPDQKAKNILLS 454
P+ N LL+
Sbjct: 448 CPNTIFFNTLLN 459
Score = 154 bits (390), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 97/392 (24%), Positives = 173/392 (44%), Gaps = 35/392 (8%)
Query: 97 MDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRR 156
+ + +I ++G +KA + M +G +P+ +++ L+ Y G+ K A IFR+
Sbjct: 207 VSYTTVINGLLREGQLDKAYCLFDEMLDQGMSPNCITYNCLLHGYCSSGKPKEAIGIFRK 266
Query: 157 MQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSP----------------- 199
M G P +TY ++ + + EA +VF +++ + P
Sbjct: 267 MCRDGVEPDVVTYNTLMVYLCKNGRSMEARKVFDSMVKKGHKPDSSIYGTLLHGYATEGY 326
Query: 200 ---------------LKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNS 244
+PD +F+++I Y K G ++A F+ M ++G+ + VTY +
Sbjct: 327 LVQMHQLLDVMVRNGTQPDHYIFNILIGAYAKHGMVDEAMLAFSKMRQQGLHPNIVTYGT 386
Query: 245 LMSFETNYKEVSKIYDQMQRA---GLQPDVVSYALLINAYGKARREEEALAVFEEMLDAG 301
+M +V Q R GL P+ V + LI+ + ++A + EM+ G
Sbjct: 387 VMDALCRVGKVDDAMSQFDRLISEGLTPNGVVFRTLIHGLCACDKWDKAEELAVEMIGRG 446
Query: 302 VRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAE 361
+ P +N LL+ GMV +A+ +F M R D+ +YTT++ Y ++ A
Sbjct: 447 ICPNTIFFNTLLNHLCKEGMVTRAKNIFDLMVRVDVQCDVITYTTLIDGYCLDGKVDEAT 506
Query: 362 KFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAY 421
K + DG PN +TY T+I GY K +E ++ +M G+ P I++TI+
Sbjct: 507 KLLEGMVLDGVKPNEVTYNTIINGYCKNGRIEDACSLFRQMASKGVNPGIVIYSTILHGL 566
Query: 422 GKNKDFDSAVVWYKEMESCGFPPDQKAKNILL 453
+ + +A Y M CG NI+L
Sbjct: 567 FQTRRIAAAKELYLWMIKCGIKLPIGTYNIIL 598
Score = 138 bits (347), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 100/380 (26%), Positives = 174/380 (45%), Gaps = 50/380 (13%)
Query: 111 DFNKAEKVLSFMN-------KKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPR 163
D N++++ L ++ + G P VVS+T ++ R G+ A +F M G
Sbjct: 179 DENRSQQALHLLHTMMADDTRGGCPPDVVSYTTVINGLLREGQLDKAYCLFDEMLDQGMS 238
Query: 164 PSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFH-MMIYMYKKAGGYEK 222
P+ +TY +L + + K KEA +F + + ++PD ++ +M+Y+ K E
Sbjct: 239 PNCITYNCLLHGYCSSGKPKEAIGIFRKMC---RDGVEPDVVTYNTLMVYLCKNGRSME- 294
Query: 223 ARKLFALMAERGVQQSTVTYNSLM---SFETNYKEVSKIYDQMQRAGLQPDVVSYALLIN 279
ARK+F M ++G + + Y +L+ + E ++ ++ D M R G QPD + +LI
Sbjct: 295 ARKVFDSMVKKGHKPDSSIYGTLLHGYATEGYLVQMHQLLDVMVRNGTQPDHYIFNILIG 354
Query: 280 AYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQART------------ 327
AY K +EA+ F +M G+ P Y ++DA G VD A +
Sbjct: 355 AYAKHGMVDEAMLAFSKMRQQGLHPNIVTYGTVMDALCRVGKVDDAMSQFDRLISEGLTP 414
Query: 328 ---VFKCMRRDRCSPD----------------ICSYTTMLSAYVNASDMEG----AEKFF 364
VF+ + C+ D IC T + +N EG A+ F
Sbjct: 415 NGVVFRTLIHGLCACDKWDKAEELAVEMIGRGICPNTIFFNTLLNHLCKEGMVTRAKNIF 474
Query: 365 RRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKN 424
+ + +VITY TLI GY +++ ++ + M ++G+KPN+ + TI++ Y KN
Sbjct: 475 DLMVRVDVQCDVITYTTLIDGYCLDGKVDEATKLLEGMVLDGVKPNEVTYNTIINGYCKN 534
Query: 425 KDFDSAVVWYKEMESCGFPP 444
+ A +++M S G P
Sbjct: 535 GRIEDACSLFRQMASKGVNP 554
Score = 124 bits (312), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 80/347 (23%), Positives = 158/347 (45%), Gaps = 6/347 (1%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
L+ Y +G + ++L M + G P L+ AY + G A F +M+ G
Sbjct: 317 LLHGYATEGYLVQMHQLLDVMVRNGTQPDHYIFNILIGAYAKHGMVDEAMLAFSKMRQQG 376
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
P+ +TY ++ K +A F L+ E L P+ +F +I+ ++
Sbjct: 377 LHPNIVTYGTVMDALCRVGKVDDAMSQFDRLISEG---LTPNGVVFRTLIHGLCACDKWD 433
Query: 222 KARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSK---IYDQMQRAGLQPDVVSYALLI 278
KA +L M RG+ +T+ +N+L++ V++ I+D M R +Q DV++Y LI
Sbjct: 434 KAEELAVEMIGRGICPNTIFFNTLLNHLCKEGMVTRAKNIFDLMVRVDVQCDVITYTTLI 493
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCS 338
+ Y + +EA + E M+ GV+P YN +++ + +G ++ A ++F+ M +
Sbjct: 494 DGYCLDGKVDEATKLLEGMVLDGVKPNEVTYNTIINGYCKNGRIEDACSLFRQMASKGVN 553
Query: 339 PDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEI 398
P I Y+T+L + A++ + + + G + TY +++G + N + + +
Sbjct: 554 PGIVIYSTILHGLFQTRRIAAAKELYLWMIKCGIKLPIGTYNIILQGLCQNNCTDDALRM 613
Query: 399 YDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPD 445
+ + + F ++DA K D A + + + G P+
Sbjct: 614 FHNLCLIDFHLQNRTFNIMIDALLKGGRHDEAKDLFASLLARGLVPN 660
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 96/448 (21%), Positives = 199/448 (44%), Gaps = 41/448 (9%)
Query: 59 PKDLVLGTLVRLKQLKKWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKV 118
P + GTL+ + + V L + +++ + F +LI AY K G ++A
Sbjct: 309 PDSSIYGTLLHGYATEGYLVQMHQLLDVMVRNGTQPDHYIFNILIGAYAKHGMVDEAMLA 368
Query: 119 LSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVE 178
S M ++G P++V++ +M+A R G+ +A + F R+ S G P+ + ++ ++
Sbjct: 369 FSKMRQQGLHPNIVTYGTVMDALCRVGKVDDAMSQFDRLISEGLTPNGVVFRTLIHGLCA 428
Query: 179 ANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQS 238
+K+ +AEE+ + ++ + P+ F+ ++ K G +A+ +F LM VQ
Sbjct: 429 CDKWDKAEELAVEMIGRG---ICPNTIFFNTLLNHLCKEGMVTRAKNIFDLMVRVDVQCD 485
Query: 239 TVTYNSLM---SFETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFE 295
+TY +L+ + E +K+ + M G++P+ V+Y +IN Y K R E+A ++F
Sbjct: 486 VITYTTLIDGYCLDGKVDEATKLLEGMVLDGVKPNEVTYNTIINGYCKNGRIEDACSLFR 545
Query: 296 EMLDAGVRPTHKAYNILLDAFAISGMVDQARTVF----KC---------------MRRDR 336
+M GV P Y+ +L + + A+ ++ KC + ++
Sbjct: 546 QMASKGVNPGIVIYSTILHGLFQTRRIAAAKELYLWMIKCGIKLPIGTYNIILQGLCQNN 605
Query: 337 CSPD-------IC---------SYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYG 380
C+ D +C ++ M+ A + + A+ F L G VPNV+TY
Sbjct: 606 CTDDALRMFHNLCLIDFHLQNRTFNIMIDALLKGGRHDEAKDLFASLLARGLVPNVVTYW 665
Query: 381 TLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESC 440
++K + LE++ +++ + NG + + ++ + + A V+ +++
Sbjct: 666 LMMKSLIEQGLLEELDDLFLSLEKNGCTADSRMLNALVGKLPQKGEVRKAGVYLSKIDEN 725
Query: 441 GFPPDQKAKNILLSLAKTADERNEANEL 468
F + L+ L + N +
Sbjct: 726 NFSLEASTAESLVFLVSSGKYDQHINSI 753
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/227 (20%), Positives = 94/227 (41%), Gaps = 9/227 (3%)
Query: 258 IYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFA 317
++++M RA D+ +Y+++I +A + A A ++ G ++ LL
Sbjct: 87 LFNRMPRA----DLCTYSIVIGCCSRAGHLDLAFAALGRVIRTGWTAQAITFSPLLKGLC 142
Query: 318 ISGMVDQARTV-FKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQD----GF 372
A + + M C+P+ SY +L + + + A + D G
Sbjct: 143 HDKRTSDAMDIALRRMPALGCTPNAFSYNILLKGLCDENRSQQALHLLHTMMADDTRGGC 202
Query: 373 VPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVV 432
P+V++Y T+I G + L+K ++D+M G+ PN + ++ Y + A+
Sbjct: 203 PPDVVSYTTVINGLLREGQLDKAYCLFDEMLDQGMSPNCITYNCLLHGYCSSGKPKEAIG 262
Query: 433 WYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEP 479
+++M G PD N L+ EA ++ + ++P
Sbjct: 263 IFRKMCRDGVEPDVVTYNTLMVYLCKNGRSMEARKVFDSMVKKGHKP 309
>gi|357120470|ref|XP_003561950.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Brachypodium distachyon]
Length = 925
Score = 155 bits (393), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 98/386 (25%), Positives = 187/386 (48%), Gaps = 5/386 (1%)
Query: 70 LKQLKKWNVVSEVLEWLR--IQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGY 127
L QL K N+ S V++ ++ N + + +I A K G+ AE +++ + K G
Sbjct: 200 LIQLNKLNMTSTVMDRYHQILREGLQPNLLIYNSVINALCKDGNVRDAESIINKVFKSGM 259
Query: 128 APSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEE 187
P ++T+++ Y R +A IF RM G P+A TY ++ + + EA +
Sbjct: 260 KPDTFTYTSMILGYCRNRDLDSAFEIFNRMDEEGCEPNAATYSTLINGLCNSGRVNEALD 319
Query: 188 VFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMS 247
F++ + + + P F I G E A K+F M ++G + + TY SL+S
Sbjct: 320 -FIS--EMTRHGVLPTVHTFTAPIVALCDMGRIEDAWKIFIDMKKKGCKPNVYTYTSLIS 376
Query: 248 FETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHK 307
+ + ++ +M R G+ P+ V+Y L+N + + AL VF M G P
Sbjct: 377 GQRVSRMAIGLFHRMSRDGVVPNTVTYNALMNVLMENMEIDSALIVFNMMGKHGCLPNTS 436
Query: 308 AYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRL 367
+YN L+ + G ++A ++ M + R +P + +Y ++ Y ++ D + A + +
Sbjct: 437 SYNELIRGYCTIGDTEKAMSMLTNMLKGRPTPTLVTYNIIIKGYCDSGDTDVAIRVLELM 496
Query: 368 KQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDF 427
K +G P+ +Y LI G+ K++ +E ++++M G+ PN+ +T ++ Y K++
Sbjct: 497 KANGCQPDEWSYTELISGFCKISKMELASGMFNEMMDRGLCPNEVTYTALISGYCKDEKL 556
Query: 428 DSAVVWYKEMESCGFPPDQKAKNILL 453
D A + M+ G P+ + N+L+
Sbjct: 557 DCAARMLERMKRSGCRPNVQTYNVLI 582
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 95/387 (24%), Positives = 180/387 (46%), Gaps = 11/387 (2%)
Query: 99 FLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRY-KNAEAIFRRM 157
F I A G A K+ M KKG P+V ++T+L+ G R + A +F RM
Sbjct: 336 FTAPIVALCDMGRIEDAWKIFIDMKKKGCKPNVYTYTSLIS----GQRVSRMAIGLFHRM 391
Query: 158 QSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKA 217
G P+ +TY ++ + +E + A VF + K P+ ++ +I Y
Sbjct: 392 SRDGVVPNTVTYNALMNVLMENMEIDSALIVFNMM---GKHGCLPNTSSYNELIRGYCTI 448
Query: 218 GGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVS---KIYDQMQRAGLQPDVVSY 274
G EKA + M + + VTYN ++ + + ++ + M+ G QPD SY
Sbjct: 449 GDTEKAMSMLTNMLKGRPTPTLVTYNIIIKGYCDSGDTDVAIRVLELMKANGCQPDEWSY 508
Query: 275 ALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRR 334
LI+ + K + E A +F EM+D G+ P Y L+ + +D A + + M+R
Sbjct: 509 TELISGFCKISKMELASGMFNEMMDRGLCPNEVTYTALISGYCKDEKLDCAARMLERMKR 568
Query: 335 DRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEK 394
C P++ +Y ++ ++ GAE+ + + ++ P+V+TY T+I G +
Sbjct: 569 SGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMLEEKISPDVVTYSTVINGLCNNGAIPL 628
Query: 395 MMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLS 454
+E+++KM +G PN +++++ A G+ + A + E++ G PD+ ++
Sbjct: 629 ALEMFNKMVKHGCLPNLHTYSSLIQALGQEGRVEEAEEMFSELKKQGLIPDEVTYVKMIE 688
Query: 455 LAKTADERNEANELLGNFNHPNNEPGI 481
+ + + + A + LG + +P +
Sbjct: 689 VCVMSGKVDRAFDFLGEMINAGCQPTL 715
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 68/268 (25%), Positives = 130/268 (48%), Gaps = 6/268 (2%)
Query: 234 GVQQSTVTYNSLMSF---ETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEA 290
G+Q + + YNS+++ + N ++ I +++ ++G++PD +Y +I Y + R + A
Sbjct: 223 GLQPNLLIYNSVINALCKDGNVRDAESIINKVFKSGMKPDTFTYTSMILGYCRNRDLDSA 282
Query: 291 LAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSA 350
+F M + G P Y+ L++ SG V++A M R P + ++T + A
Sbjct: 283 FEIFNRMDEEGCEPNAATYSTLINGLCNSGRVNEALDFISEMTRHGVLPTVHTFTAPIVA 342
Query: 351 YVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPN 410
+ +E A K F +K+ G PNV TY +LI G +V+ + + ++ +M +G+ PN
Sbjct: 343 LCDMGRIEDAWKIFIDMKKKGCKPNVYTYTSLISG-QRVSRMA--IGLFHRMSRDGVVPN 399
Query: 411 QTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLG 470
+ +M+ +N + DSA++ + M G P+ + N L+ T + +A +L
Sbjct: 400 TVTYNALMNVLMENMEIDSALIVFNMMGKHGCLPNTSSYNELIRGYCTIGDTEKAMSMLT 459
Query: 471 NFNHPNNEPGINGLSISVDEEDDDDDDD 498
N P + +I + D D D
Sbjct: 460 NMLKGRPTPTLVTYNIIIKGYCDSGDTD 487
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 73/287 (25%), Positives = 133/287 (46%), Gaps = 6/287 (2%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
LI Y GD KA +L+ M K P++V++ +++ Y G A + M+++G
Sbjct: 441 LIRGYCTIGDTEKAMSMLTNMLKGRPTPTLVTYNIIIKGYCDSGDTDVAIRVLELMKANG 500
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
+P +Y ++ F + +K + A +F ++D L P++ + +I Y K +
Sbjct: 501 CQPDEWSYTELISGFCKISKMELASGMFNEMMDRG---LCPNEVTYTALISGYCKDEKLD 557
Query: 222 KARKLFALMAERGVQQSTVTYNSL---MSFETNYKEVSKIYDQMQRAGLQPDVVSYALLI 278
A ++ M G + + TYN L ++ + N+ ++ M + PDVV+Y+ +I
Sbjct: 558 CAARMLERMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMLEEKISPDVVTYSTVI 617
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCS 338
N AL +F +M+ G P Y+ L+ A G V++A +F +++
Sbjct: 618 NGLCNNGAIPLALEMFNKMVKHGCLPNLHTYSSLIQALGQEGRVEEAEEMFSELKKQGLI 677
Query: 339 PDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKG 385
PD +Y M+ V + ++ A F + G P + TY LIKG
Sbjct: 678 PDEVTYVKMIEVCVMSGKVDRAFDFLGEMINAGCQPTLQTYDVLIKG 724
Score = 101 bits (252), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 79/332 (23%), Positives = 139/332 (41%), Gaps = 44/332 (13%)
Query: 161 GPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGY 220
GP+ TY +L ++ NK V + L+P+ +++ +I K G
Sbjct: 188 GPKMGLFTYTTLL---IQLNKLNMTSTVMDRYHQILREGLQPNLLIYNSVINALCKDGNV 244
Query: 221 EKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVS---KIYDQMQRAGLQPDVVSYALL 277
A + + + G++ T TY S++ +++ +I+++M G +P+ +Y+ L
Sbjct: 245 RDAESIINKVFKSGMKPDTFTYTSMILGYCRNRDLDSAFEIFNRMDEEGCEPNAATYSTL 304
Query: 278 INAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRC 337
IN + R EAL EM GV PT + + A G ++ A +F M++ C
Sbjct: 305 INGLCNSGRVNEALDFISEMTRHGVLPTVHTFTAPIVALCDMGRIEDAWKIFIDMKKKGC 364
Query: 338 SPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGT---------------- 381
P++ +YT+++S S M A F R+ +DG VPN +TY
Sbjct: 365 KPNVYTYTSLISGQ-RVSRM--AIGLFHRMSRDGVVPNTVTYNALMNVLMENMEIDSALI 421
Query: 382 -------------------LIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYG 422
LI+GY + + EK M + M P + I+ Y
Sbjct: 422 VFNMMGKHGCLPNTSSYNELIRGYCTIGDTEKAMSMLTNMLKGRPTPTLVTYNIIIKGYC 481
Query: 423 KNKDFDSAVVWYKEMESCGFPPDQKAKNILLS 454
+ D D A+ + M++ G PD+ + L+S
Sbjct: 482 DSGDTDVAIRVLELMKANGCQPDEWSYTELIS 513
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 68/271 (25%), Positives = 128/271 (47%), Gaps = 16/271 (5%)
Query: 54 RGQPLPKDLVLGTLVR-LKQLKKWNVVSEVLEWLRIQSW----WDFNEMDFLMLITAYGK 108
+G+P P + +++ +V VLE ++ W + E LI+ + K
Sbjct: 463 KGRPTPTLVTYNIIIKGYCDSGDTDVAIRVLELMKANGCQPDEWSYTE-----LISGFCK 517
Query: 109 QGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALT 168
A + + M +G P+ V++TAL+ Y + + A + RM+ SG RP+ T
Sbjct: 518 ISKMELASGMFNEMMDRGLCPNEVTYTALISGYCKDEKLDCAARMLERMKRSGCRPNVQT 577
Query: 169 YQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFA 228
Y +++ + N F AEE+ +L+E+ S PD + +I G A ++F
Sbjct: 578 YNVLIHGLTKQNNFSGAEELCKVMLEEKIS---PDVVTYSTVINGLCNNGAIPLALEMFN 634
Query: 229 LMAERGVQQSTVTYNSLMSF---ETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKAR 285
M + G + TY+SL+ E +E +++ ++++ GL PD V+Y +I +
Sbjct: 635 KMVKHGCLPNLHTYSSLIQALGQEGRVEEAEEMFSELKKQGLIPDEVTYVKMIEVCVMSG 694
Query: 286 REEEALAVFEEMLDAGVRPTHKAYNILLDAF 316
+ + A EM++AG +PT + Y++L+
Sbjct: 695 KVDRAFDFLGEMINAGCQPTLQTYDVLIKGL 725
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 81/369 (21%), Positives = 145/369 (39%), Gaps = 29/369 (7%)
Query: 74 KKWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVS 133
+K + + +LE ++ +S N + +LI KQ +F+ AE++ M ++ +P VV+
Sbjct: 554 EKLDCAARMLERMK-RSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMLEEKISPDVVT 612
Query: 134 HTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLL 193
++ ++ G A +F +M G P+ TY +++ + + +EAEE+F L
Sbjct: 613 YSTVINGLCNNGAIPLALEMFNKMVKHGCLPNLHTYSSLIQALGQEGRVEEAEEMFSEL- 671
Query: 194 DEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYK 253
+K L PD+ + MI + +G ++A M G Q + TY+ L+ N
Sbjct: 672 --KKQGLIPDEVTYVKMIEVCVMSGKVDRAFDFLGEMINAGCQPTLQTYDVLIKGLQNEM 729
Query: 254 EVSKIYDQMQRAG--------LQPDVVS-----------------YALLINAYGKARREE 288
K+ A + DV+S Y L++ ++ R
Sbjct: 730 VYHKLVALPNAASTSTFDDQIINKDVISVLSSKLAELDFELSRQLYDALLSRLSRSGRWF 789
Query: 289 EALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTML 348
EA ++ M+ P Y L + + VD A VFK M RC + Y ++
Sbjct: 790 EANNLYRSMVSQSQCPNQDTYKHFLISLLRALKVDLAMDVFKHMSDQRCELHLTGYKELI 849
Query: 349 SAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIK 408
+ A F ++ + I + LI G + ME M N
Sbjct: 850 CTLCQLHRRKEARFVFEKMLSRALNADEIVWTILINGLLGAGYKDLCMEFLHIMETNRRN 909
Query: 409 PNQTIFTTI 417
P+ T +
Sbjct: 910 PSSHARTIL 918
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 45/195 (23%), Positives = 86/195 (44%)
Query: 260 DQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAIS 319
D + G + + +Y L+ K + + ++L G++P YN +++A
Sbjct: 182 DMFSQRGPKMGLFTYTTLLIQLNKLNMTSTVMDRYHQILREGLQPNLLIYNSVINALCKD 241
Query: 320 GMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITY 379
G V A ++ + + PD +YT+M+ Y D++ A + F R+ ++G PN TY
Sbjct: 242 GNVRDAESIINKVFKSGMKPDTFTYTSMILGYCRNRDLDSAFEIFNRMDEEGCEPNAATY 301
Query: 380 GTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMES 439
TLI G + + ++ +M +G+ P FT + A + A + +M+
Sbjct: 302 STLINGLCNSGRVNEALDFISEMTRHGVLPTVHTFTAPIVALCDMGRIEDAWKIFIDMKK 361
Query: 440 CGFPPDQKAKNILLS 454
G P+ L+S
Sbjct: 362 KGCKPNVYTYTSLIS 376
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 31/146 (21%), Positives = 68/146 (46%)
Query: 343 SYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKM 402
+YTT+L + + ++ ++G PN++ Y ++I K N+ I +K+
Sbjct: 195 TYTTLLIQLNKLNMTSTVMDRYHQILREGLQPNLLIYNSVINALCKDGNVRDAESIINKV 254
Query: 403 RVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADER 462
+G+KP+ +T+++ Y +N+D DSA + M+ G P+ + L++ +
Sbjct: 255 FKSGMKPDTFTYTSMILGYCRNRDLDSAFEIFNRMDEEGCEPNAATYSTLINGLCNSGRV 314
Query: 463 NEANELLGNFNHPNNEPGINGLSISV 488
NEA + + P ++ + +
Sbjct: 315 NEALDFISEMTRHGVLPTVHTFTAPI 340
Score = 41.6 bits (96), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 35/149 (23%), Positives = 65/149 (43%), Gaps = 9/149 (6%)
Query: 347 MLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNG 406
M+ + N ++M A + Q G + TY TL+ K+N +M+ Y ++ G
Sbjct: 164 MIKSCSNKAEMTQALNYLDMFSQRGPKMGLFTYTTLLIQLNKLNMTSTVMDRYHQILREG 223
Query: 407 IKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQ-KAKNILLSLAKTADERNEA 465
++PN I+ ++++A K+ + A ++ G PD +++L + D + A
Sbjct: 224 LQPNLLIYNSVINALCKDGNVRDAESIINKVFKSGMKPDTFTYTSMILGYCRNRD-LDSA 282
Query: 466 NELLGNFNHPNNEPG-------INGLSIS 487
E+ + EP INGL S
Sbjct: 283 FEIFNRMDEEGCEPNAATYSTLINGLCNS 311
>gi|297797161|ref|XP_002866465.1| hypothetical protein ARALYDRAFT_496372 [Arabidopsis lyrata subsp.
lyrata]
gi|297312300|gb|EFH42724.1| hypothetical protein ARALYDRAFT_496372 [Arabidopsis lyrata subsp.
lyrata]
Length = 977
Score = 155 bits (393), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 95/348 (27%), Positives = 163/348 (46%), Gaps = 6/348 (1%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
LI + ++ + K ++L + K+ S ++ ++ G A I + M +SG
Sbjct: 391 LIEGFFREKNVRKGYELLVEIKKRNIVISPYTYGTAVKGMCSSGDLDGAYNIVKEMGASG 450
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
RP+ + Y ++K F++ ++F +A V L + + + PD ++ +I KA +
Sbjct: 451 CRPNVVIYTTLIKTFLQKSRFGDAVRV---LKEMREQGIAPDTFCYNSLIIGLSKAKKMD 507
Query: 222 KARKLFALMAERGVQQSTVTYNSLMSFETNYKEVS---KIYDQMQRAGLQPDVVSYALLI 278
+AR M E G + TY + +S E + K +M G+ P+ V LI
Sbjct: 508 EARSFLLEMVENGFKPDAFTYGAFISGYIEAGEFASADKYVKEMLECGVIPNKVLCTGLI 567
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCS 338
N Y K + EA + F M++ G+ K Y +L++ +G V+ A +F MR +
Sbjct: 568 NEYCKKGKVIEACSAFRSMVEQGILGDAKTYTVLMNGLVKNGKVNDAEEIFHEMRGKGIA 627
Query: 339 PDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEI 398
PD+ SY T++ + +M+ A F + Q G NVI Y L+ G+ + +EK E+
Sbjct: 628 PDVFSYGTLIDGFSKLGNMQKASSIFDEMVQAGLTSNVIIYNMLLGGFCRSGEIEKAKEL 687
Query: 399 YDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQ 446
D+M G PN + TI+D Y K+ D A + EM+ G PD
Sbjct: 688 LDEMSGKGFPPNAVTYCTIIDGYCKSGDLAEAFQLFDEMKLKGLVPDS 735
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 94/379 (24%), Positives = 175/379 (46%), Gaps = 13/379 (3%)
Query: 109 QGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALT 168
GD + A ++ M G P+VV +T L++ + + R+ +A + + M+ G P
Sbjct: 433 SGDLDGAYNIVKEMGASGCRPNVVIYTTLIKTFLQKSRFGDAVRVLKEMREQGIAPDTFC 492
Query: 169 YQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFA 228
Y L + +K K+ +E LL+ ++ KPD + I Y +AG + A K
Sbjct: 493 YN---SLIIGLSKAKKMDEARSFLLEMVENGFKPDAFTYGAFISGYIEAGEFASADKYVK 549
Query: 229 LMAERGVQQSTVTYNSLM---SFETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKAR 285
M E GV + V L+ + E + M G+ D +Y +L+N K
Sbjct: 550 EMLECGVIPNKVLCTGLINEYCKKGKVIEACSAFRSMVEQGILGDAKTYTVLMNGLVKNG 609
Query: 286 REEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYT 345
+ +A +F EM G+ P +Y L+D F+ G + +A ++F M + + ++ Y
Sbjct: 610 KVNDAEEIFHEMRGKGIAPDVFSYGTLIDGFSKLGNMQKASSIFDEMVQAGLTSNVIIYN 669
Query: 346 TMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVN 405
+L + + ++E A++ + GF PN +TY T+I GY K +L + +++D+M++
Sbjct: 670 MLLGGFCRSGEIEKAKELLDEMSGKGFPPNAVTYCTIIDGYCKSGDLAEAFQLFDEMKLK 729
Query: 406 GIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEME---SCGFPPDQKAKNILLSLAKTADER 462
G+ P+ ++TT++D + D + A+ ++ E + P N + KT
Sbjct: 730 GLVPDSFVYTTLVDGCCRLNDVERAITIFETNEKGCASSSAPFNALINWVFKFGKTELTT 789
Query: 463 NEANELLGN----FNHPNN 477
+ N L+ F PN+
Sbjct: 790 DMINRLMDGSFDKFGKPND 808
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 107/443 (24%), Positives = 195/443 (44%), Gaps = 47/443 (10%)
Query: 37 QIEEVGSAVAVLRSERTRGQPLPKDLVLGTLV-RLKQLKKWNVVSEVLEWLRIQSWWDFN 95
Q G AV VL+ R +G P +L+ L + KK + L + +++ + +
Sbjct: 467 QKSRFGDAVRVLKEMREQGIA-PDTFCYNSLIIGLSKAKKMDEARSFLLEM-VENGFKPD 524
Query: 96 EMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFR 155
+ I+ Y + G+F A+K + M + G P+ V T L+ Y + G+ A + FR
Sbjct: 525 AFTYGAFISGYIEAGEFASADKYVKEMLECGVIPNKVLCTGLINEYCKKGKVIEACSAFR 584
Query: 156 RMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYK 215
M G A TY +++ V+ K +AEE+F + + PD + +I +
Sbjct: 585 SMVEQGILGDAKTYTVLMNGLVKNGKVNDAEEIFHEM---RGKGIAPDVFSYGTLIDGFS 641
Query: 216 KAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSK---IYDQMQRAGLQPDVV 272
K G +KA +F M + G+ + + YN L+ E+ K + D+M G P+ V
Sbjct: 642 KLGNMQKASSIFDEMVQAGLTSNVIIYNMLLGGFCRSGEIEKAKELLDEMSGKGFPPNAV 701
Query: 273 SYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCM 332
+Y +I+ Y K+ EA +F+EM G+ P Y L+D V++A T+F+
Sbjct: 702 TYCTIIDGYCKSGDLAEAFQLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFETN 761
Query: 333 RRDRCS--------------------------------------PDICSYTTMLSAYVNA 354
+ S P+ +Y M+
Sbjct: 762 EKGCASSSAPFNALINWVFKFGKTELTTDMINRLMDGSFDKFGKPNDVTYNIMIDYLCKE 821
Query: 355 SDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIF 414
++E A++ F +++ +P VITY +L+ GY K+ +M ++D++ GI+P+ ++
Sbjct: 822 GNLEAAKELFHHMQKANLMPTVITYTSLLNGYDKMGRRSEMFSVFDEVIAAGIEPDNIMY 881
Query: 415 TTIMDAYGKNKDFDSAVVWYKEM 437
+ I++A+ K A+V +M
Sbjct: 882 SVIINAFLKEGMTTKALVLLDQM 904
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 89/367 (24%), Positives = 168/367 (45%), Gaps = 14/367 (3%)
Query: 29 KNWRRLMNQI---EEVGSAVAVLRSERTRGQPLPKDLVLGTLV-RLKQLKKWNVVSEVLE 84
K + LMN + +V A + R +G P GTL+ +L S + +
Sbjct: 596 KTYTVLMNGLVKNGKVNDAEEIFHEMRGKGIA-PDVFSYGTLIDGFSKLGNMQKASSIFD 654
Query: 85 WLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRG 144
+ +Q+ N + + ML+ + + G+ KA+++L M+ KG+ P+ V++ +++ Y +
Sbjct: 655 EM-VQAGLTSNVIIYNMLLGGFCRSGEIEKAKELLDEMSGKGFPPNAVTYCTIIDGYCKS 713
Query: 145 GRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQ 204
G A +F M+ G P + Y ++ N + A +F T S P
Sbjct: 714 GDLAEAFQLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFETNEKGCASSSAPFN 773
Query: 205 KMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSF---ETNYKEVSKIYDQ 261
+ + + K + +L ++ + + VTYN ++ + E N + +++
Sbjct: 774 ALINWVFKFGKTELTTDMINRLMDGSFDKFGKPNDVTYNIMIDYLCKEGNLEAAKELFHH 833
Query: 262 MQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGM 321
MQ+A L P V++Y L+N Y K R E +VF+E++ AG+ P + Y+++++AF GM
Sbjct: 834 MQKANLMPTVITYTSLLNGYDKMGRRSEMFSVFDEVIAAGIEPDNIMYSVIINAFLKEGM 893
Query: 322 VDQARTVFKCMRR-----DRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNV 376
+A + M D C I + +LS + +ME AEK + + ++P+
Sbjct: 894 TTKALVLLDQMFAKNAVDDGCKLSISTCRALLSGFAKVGEMEVAEKVVENMVRLKYIPDS 953
Query: 377 ITYGTLI 383
T LI
Sbjct: 954 STVIELI 960
Score = 108 bits (269), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 97/418 (23%), Positives = 164/418 (39%), Gaps = 38/418 (9%)
Query: 87 RIQSWWD-----------FNEMDFLMLITAYGKQGDFNKAEKVL---------------- 119
R+ +WD F+ + MLI A+ + G+ A+ VL
Sbjct: 204 RLDLFWDVYKGMVERNVVFDVQSYEMLIGAHCRDGNVQLAKDVLLKTEEELGTATLNVDE 263
Query: 120 -----SFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILK 174
M+ KG PS S+ L++ + R ++A+++ M S G + Y I++
Sbjct: 264 ALELKKSMSCKGLVPSRQSYNLLIDGLCKQKRLEDAKSLLVEMNSVGLFADNVAYSILID 323
Query: 175 LFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERG 234
++ A + ++ S D M+ I + K G EKA+ LF M G
Sbjct: 324 GLLKGRNADAANGLVHEMVSHGFSI---DPMMYDYFICVMSKEGAMEKAKALFDGMITFG 380
Query: 235 VQQSTVTYNSLMSFETNYKEVSKIYDQMQRAGLQPDVVS---YALLINAYGKARREEEAL 291
V Y SL+ K V K Y+ + + V+S Y + + + A
Sbjct: 381 VTPGARAYASLIEGFFREKNVRKGYELLVEIKKRNIVISPYTYGTAVKGMCSSGDLDGAY 440
Query: 292 AVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAY 351
+ +EM +G RP Y L+ F A V K MR +PD Y +++
Sbjct: 441 NIVKEMGASGCRPNVVIYTTLIKTFLQKSRFGDAVRVLKEMREQGIAPDTFCYNSLIIGL 500
Query: 352 VNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQ 411
A M+ A F + ++GF P+ TYG I GY + + +M G+ PN+
Sbjct: 501 SKAKKMDEARSFLLEMVENGFKPDAFTYGAFISGYIEAGEFASADKYVKEMLECGVIPNK 560
Query: 412 TIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELL 469
+ T +++ Y K A ++ M G D K +L++ + N+A E+
Sbjct: 561 VLCTGLINEYCKKGKVIEACSAFRSMVEQGILGDAKTYTVLMNGLVKNGKVNDAEEIF 618
>gi|15242530|ref|NP_198814.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171449|sp|Q9FLD8.1|PP408_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g39980, chloroplastic; Flags: Precursor
gi|10176990|dbj|BAB10222.1| unnamed protein product [Arabidopsis thaliana]
gi|332007115|gb|AED94498.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 678
Score = 155 bits (393), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 103/418 (24%), Positives = 198/418 (47%), Gaps = 44/418 (10%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
LI + D++KA + S + + G P +V++ +++ YG+ ++ A + + M +G
Sbjct: 231 LIELSRRLCDYSKAISIFSRLKRSGITPDLVAYNSMINVYGKAKLFREARLLIKEMNEAG 290
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
P+ ++Y +L ++VE +KF EA VF + E L D ++MI +Y + +
Sbjct: 291 VLPNTVSYSTLLSVYVENHKFLEALSVFAEM-KEVNCAL--DLTTCNIMIDVYGQLDMVK 347
Query: 222 KARKLFALMAERGVQQSTVTYNSLMSFETN---YKEVSKIYDQMQRAGLQPDVVSYALLI 278
+A +LF + + ++ + V+YN+++ + E ++ MQR ++ +VV+Y +I
Sbjct: 348 EADRLFWSLRKMDIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKDIEQNVVTYNTMI 407
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCS 338
YGK E+A + +EM G+ P Y+ ++ + +G +D+A T+F+ +R
Sbjct: 408 KIYGKTMEHEKATNLVQEMQSRGIEPNAITYSTIISIWGKAGKLDRAATLFQKLRSSGVE 467
Query: 339 PDICSYTTMLSAY-------------------------------VNASDMEGAEKFFRRL 367
D Y TM+ AY A E A FR+
Sbjct: 468 IDQVLYQTMIVAYERVGLMGHAKRLLHELKLPDNIPRETAITILAKAGRTEEATWVFRQA 527
Query: 368 KQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDF 427
+ G V ++ +G +I Y++ ++E+++KMR G P+ + +++AYGK ++F
Sbjct: 528 FESGEVKDISVFGCMINLYSRNQRYVNVIEVFEKMRTAGYFPDSNVIAMVLNAYGKQREF 587
Query: 428 DSAVVWYKEM--ESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGING 483
+ A Y+EM E C FP + + +LSL + + L F ++P +N
Sbjct: 588 EKADTVYREMQEEGCVFPDEVHFQ--MLSLYSSKKDFEMVESL---FQRLESDPNVNS 640
Score = 154 bits (390), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 99/407 (24%), Positives = 189/407 (46%), Gaps = 7/407 (1%)
Query: 84 EWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKG-YAPSVVSHTALMEAYG 142
E + S + ++ +++ ++ D+ ++ +L +++++ Y PSV ++ ++
Sbjct: 107 ELFSLLSTYKDRQLSIRFMVSLLSRENDWQRSLALLDWVHEEAKYTPSVFAYNVVLRNVL 166
Query: 143 RGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKP 202
R ++ A +F M+ P TY ++ F + F A L E+ +
Sbjct: 167 RAKQFDIAHGLFDEMRQRALAPDRYTYSTLITSFGKEGMFDSA---LSWLQKMEQDRVSG 223
Query: 203 DQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETN---YKEVSKIY 259
D ++ +I + ++ Y KA +F+ + G+ V YNS+++ ++E +
Sbjct: 224 DLVLYSNLIELSRRLCDYSKAISIFSRLKRSGITPDLVAYNSMINVYGKAKLFREARLLI 283
Query: 260 DQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAIS 319
+M AG+ P+ VSY+ L++ Y + + EAL+VF EM + NI++D +
Sbjct: 284 KEMNEAGVLPNTVSYSTLLSVYVENHKFLEALSVFAEMKEVNCALDLTTCNIMIDVYGQL 343
Query: 320 GMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITY 379
MV +A +F +R+ P++ SY T+L Y A A FR +++ NV+TY
Sbjct: 344 DMVKEADRLFWSLRKMDIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKDIEQNVVTY 403
Query: 380 GTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMES 439
T+IK Y K EK + +M+ GI+PN ++TI+ +GK D A ++++ S
Sbjct: 404 NTMIKIYGKTMEHEKATNLVQEMQSRGIEPNAITYSTIISIWGKAGKLDRAATLFQKLRS 463
Query: 440 CGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGINGLSI 486
G DQ ++ + A LL P+N P ++I
Sbjct: 464 SGVEIDQVLYQTMIVAYERVGLMGHAKRLLHELKLPDNIPRETAITI 510
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 83/329 (25%), Positives = 158/329 (48%), Gaps = 16/329 (4%)
Query: 91 WWDFNEMD-------FLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGR 143
+W +MD + ++ YG+ F +A + M +K +VV++ +++ YG+
Sbjct: 353 FWSLRKMDIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKDIEQNVVTYNTMIKIYGK 412
Query: 144 GGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPD 203
++ A + + MQS G P+A+TY I+ ++ +A K A +F L S ++ D
Sbjct: 413 TMEHEKATNLVQEMQSRGIEPNAITYSTIISIWGKAGKLDRAATLFQKL---RSSGVEID 469
Query: 204 QKMFHMMIYMYKKAGGYEKARKLFA-LMAERGVQQSTVTYNSLMSFETNYKEVSKIYDQM 262
Q ++ MI Y++ G A++L L + + T ++++ +E + ++ Q
Sbjct: 470 QVLYQTMIVAYERVGLMGHAKRLLHELKLPDNIPRETAI--TILAKAGRTEEATWVFRQA 527
Query: 263 QRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMV 322
+G D+ + +IN Y + +R + VFE+M AG P ++L+A+
Sbjct: 528 FESGEVKDISVFGCMINLYSRNQRYVNVIEVFEKMRTAGYFPDSNVIAMVLNAYGKQREF 587
Query: 323 DQARTVFKCMRRDRCS-PDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGT 381
++A TV++ M+ + C PD + MLS Y + D E E F+RL+ D V + +
Sbjct: 588 EKADTVYREMQEEGCVFPDEVHFQ-MLSLYSSKKDFEMVESLFQRLESDPNVNSKELHLV 646
Query: 382 LIKGYAKVNNLEKMMEIYDKMRVNGI-KP 409
+ Y + + L + ++MR GI KP
Sbjct: 647 VAALYERADKLNDASRVMNRMRERGILKP 675
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/191 (23%), Positives = 95/191 (49%)
Query: 299 DAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDME 358
+A P+ AYN++L + D A +F MR+ +PD +Y+T+++++ +
Sbjct: 148 EAKYTPSVFAYNVVLRNVLRAKQFDIAHGLFDEMRQRALAPDRYTYSTLITSFGKEGMFD 207
Query: 359 GAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIM 418
A + ++++QD +++ Y LI+ ++ + K + I+ +++ +GI P+ + +++
Sbjct: 208 SALSWLQKMEQDRVSGDLVLYSNLIELSRRLCDYSKAISIFSRLKRSGITPDLVAYNSMI 267
Query: 419 DAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNE 478
+ YGK K F A + KEM G P+ + + LLS+ + EA + N
Sbjct: 268 NVYGKAKLFREARLLIKEMNEAGVLPNTVSYSTLLSVYVENHKFLEALSVFAEMKEVNCA 327
Query: 479 PGINGLSISVD 489
+ +I +D
Sbjct: 328 LDLTTCNIMID 338
Score = 46.2 bits (108), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 74/146 (50%), Gaps = 7/146 (4%)
Query: 60 KDL-VLGTLVRL-KQLKKWNVVSEVLEWLRIQSWW-DFNEMDFLMLITAYGKQGDFNKAE 116
KD+ V G ++ L + +++ V EV E +R ++ D N + M++ AYGKQ +F KA+
Sbjct: 534 KDISVFGCMINLYSRNQRYVNVIEVFEKMRTAGYFPDSNVIA--MVLNAYGKQREFEKAD 591
Query: 117 KVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLF 176
V M ++G H ++ Y ++ E++F+R++S S + ++ L+
Sbjct: 592 TVYREMQEEGCVFPDEVHFQMLSLYSSKKDFEMVESLFQRLESDPNVNSKELHLVVAALY 651
Query: 177 VEANKFKEAEEVFMTLLDEEKSPLKP 202
A+K +A V + E+ LKP
Sbjct: 652 ERADKLNDASRVMNRM--RERGILKP 675
>gi|302806555|ref|XP_002985027.1| hypothetical protein SELMODRAFT_11856 [Selaginella moellendorffii]
gi|300147237|gb|EFJ13902.1| hypothetical protein SELMODRAFT_11856 [Selaginella moellendorffii]
Length = 443
Score = 155 bits (393), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 100/360 (27%), Positives = 173/360 (48%), Gaps = 7/360 (1%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
L+ K G +A +L + G P VV++T+L++ G+ R A +F+ M S G
Sbjct: 75 LLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKKKRSFEAYKLFKEMASRG 134
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
+ Y +++ ++A K +A V+ T+ + PD MI KAG
Sbjct: 135 LALDTVCYTALIRGLLQAGKIPQASSVYKTMTSQG---CVPDVVTLSTMIDGLCKAGRIG 191
Query: 222 KARKLFALMAERGVQQSTVTYNSLMSFETNYKEVS---KIYDQMQRAGLQPDVVSYALLI 278
A ++F M RG+ + V Y++L+ +++ ++ QM++A PD ++Y +LI
Sbjct: 192 AAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILI 251
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCS 338
+ K+ A A F+EML+AG +P YNIL+ F +G D A VF M RCS
Sbjct: 252 DGLCKSGDVAAARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAACGVFDDMSSSRCS 311
Query: 339 PDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEI 398
P++ +Y T++S + A +++ +K+ G P+ Y +L+ G K LE +
Sbjct: 312 PNVVTYGTLISGLCKRRQLTKASLYYQHMKERGCPPDSFVYSSLVDGLCKSGKLEGGCML 371
Query: 399 YDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKT 458
+D+M +G+ +QT I N+ D AV + + G P +I+ +L K+
Sbjct: 372 FDEMERSGVANSQTRTRLIFHLCKANR-VDEAVSLFNAIRKEGMPHPYAYNSIISALIKS 430
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 96/371 (25%), Positives = 167/371 (45%), Gaps = 13/371 (3%)
Query: 114 KAEKVLSFMNK---KGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQ 170
K ++ ++ M K G P++ ++ AL+ + GR + A + R++ +G P +TY
Sbjct: 49 KIQEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYT 108
Query: 171 IILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALM 230
++ + + EA ++F + L D + +I +AG +A ++ M
Sbjct: 109 SLIDGLGKKKRSFEAYKLFKEMASRG---LALDTVCYTALIRGLLQAGKIPQASSVYKTM 165
Query: 231 AERGVQQSTVTYNSLMSFETNYKEVS---KIYDQMQRAGLQPDVVSYALLINAYGKARRE 287
+G VT ++++ + +I+ M+ GL P+ V Y+ LI+ KAR+
Sbjct: 166 TSQGCVPDVVTLSTMIDGLCKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKM 225
Query: 288 EEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTM 347
+ AL + +M A P YNIL+D SG V AR F M C PD+ +Y +
Sbjct: 226 DCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVAAARAFFDEMLEAGCKPDVYTYNIL 285
Query: 348 LSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGI 407
+S + A + + A F + PNV+TYGTLI G K L K Y M+ G
Sbjct: 286 ISGFCKAGNTDAACGVFDDMSSSRCSPNVVTYGTLISGLCKRRQLTKASLYYQHMKERGC 345
Query: 408 KPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANE 467
P+ ++++++D K+ + + + EME G Q ++ L K N +E
Sbjct: 346 PPDSFVYSSLVDGLCKSGKLEGGCMLFDEMERSGVANSQTRTRLIFHLCKA----NRVDE 401
Query: 468 LLGNFNHPNNE 478
+ FN E
Sbjct: 402 AVSLFNAIRKE 412
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 89/373 (23%), Positives = 173/373 (46%), Gaps = 10/373 (2%)
Query: 70 LKQLKKWNVVSEVLEWLR--IQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGY 127
L L K + E ++ LR + + + + + LI GK+ +A K+ M +G
Sbjct: 76 LNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKKKRSFEAYKLFKEMASRGL 135
Query: 128 APSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEE 187
A V +TAL+ + G+ A ++++ M S G P +T ++ +A + A
Sbjct: 136 ALDTVCYTALIRGLLQAGKIPQASSVYKTMTSQGCVPDVVTLSTMIDGLCKAGRIGAAVR 195
Query: 188 VFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMS 247
+F ++ E L P++ ++ +I+ KA + A ++ A M + T+TYN L+
Sbjct: 196 IFKSM---EARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILID 252
Query: 248 FETNYKEVS---KIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRP 304
+V+ +D+M AG +PDV +Y +LI+ + KA + A VF++M + P
Sbjct: 253 GLCKSGDVAAARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAACGVFDDMSSSRCSP 312
Query: 305 THKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFF 364
Y L+ + +A ++ M+ C PD Y++++ + +EG F
Sbjct: 313 NVVTYGTLISGLCKRRQLTKASLYYQHMKERGCPPDSFVYSSLVDGLCKSGKLEGGCMLF 372
Query: 365 RRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKN 424
+++ G V N T LI K N +++ + +++ +R G+ P+ + +I+ A K+
Sbjct: 373 DEMERSG-VANSQTRTRLIFHLCKANRVDEAVSLFNAIRKEGM-PHPYAYNSIISALIKS 430
Query: 425 KDFDSAVVWYKEM 437
+ Y+EM
Sbjct: 431 GKVNEGQAVYQEM 443
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 52/224 (23%), Positives = 103/224 (45%)
Query: 266 GLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQA 325
G D+ +Y +++ K ++ +EA+A+ E++ G PT YN LL+ G +++A
Sbjct: 29 GCTIDIHTYTTIVDWLAKNKKIQEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEA 88
Query: 326 RTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKG 385
+ + + + C+PD+ +YT+++ A K F+ + G + + Y LI+G
Sbjct: 89 IDLLRKIVDNGCTPDVVTYTSLIDGLGKKKRSFEAYKLFKEMASRGLALDTVCYTALIRG 148
Query: 386 YAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPD 445
+ + + +Y M G P+ +T++D K +AV +K ME+ G P+
Sbjct: 149 LLQAGKIPQASSVYKTMTSQGCVPDVVTLSTMIDGLCKAGRIGAAVRIFKSMEARGLAPN 208
Query: 446 QKAKNILLSLAKTADERNEANELLGNFNHPNNEPGINGLSISVD 489
+ + L+ A + + A E+L P +I +D
Sbjct: 209 EVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILID 252
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 45/181 (24%), Positives = 85/181 (46%)
Query: 309 YNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLK 368
++IL++ +GM+ QA ++ + + C+ DI +YTT++ ++ A ++
Sbjct: 2 FSILINGLVKAGMLIQAHSLAQETTTNGCTIDIHTYTTIVDWLAKNKKIQEAVALMEKIT 61
Query: 369 QDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFD 428
+G P + TY L+ G K+ LE+ +++ K+ NG P+ +T+++D GK K
Sbjct: 62 ANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKKKRSF 121
Query: 429 SAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGINGLSISV 488
A +KEM S G D L+ A + +A+ + P + LS +
Sbjct: 122 EAYKLFKEMASRGLALDTVCYTALIRGLLQAGKIPQASSVYKTMTSQGCVPDVVTLSTMI 181
Query: 489 D 489
D
Sbjct: 182 D 182
>gi|147771990|emb|CAN69053.1| hypothetical protein VITISV_022963 [Vitis vinifera]
Length = 2021
Score = 155 bits (393), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 96/391 (24%), Positives = 182/391 (46%), Gaps = 6/391 (1%)
Query: 101 MLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSS 160
+LI ++ A VL+ + K G+ P + T L+ G+ A +F +M
Sbjct: 105 ILINSFCHLNRVGFAFSVLAKILKLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMIDE 164
Query: 161 GPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGY 220
G +P+ +TY ++ + A + ++ E+ +PD ++ +I K
Sbjct: 165 GFQPNVVTYGTLINGLCKVGNTSAAIRLLRSM---EQGNCQPDVVIYTSIIDSLCKDRQV 221
Query: 221 EKARKLFALMAERGVQQSTVTYNSLMSFETN---YKEVSKIYDQMQRAGLQPDVVSYALL 277
+A LF+ M +G+ TY SL+ N +K V+ + +QM + + PDVV ++ +
Sbjct: 222 TEAFNLFSQMVGQGISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTV 281
Query: 278 INAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRC 337
++A K + EA + + M+ GV P Y L+D + +D+A VF M R
Sbjct: 282 VDALCKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGF 341
Query: 338 SPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMME 397
+PD+ SYTT+++ Y ++ A F + + ++P+ TY TL+ G V L+ +
Sbjct: 342 APDVISYTTLINGYCKIHKIDKAMYLFEEMCRKEWIPDTKTYNTLMYGLCHVGRLQDAIA 401
Query: 398 IYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAK 457
++ +M G P+ ++ ++D+ KN+ + A+ K +E+ PD + NI++
Sbjct: 402 LFHEMVARGQMPDLVTYSILLDSLCKNRHLEEAMALLKAIEASNLNPDIQVYNIIIDGMC 461
Query: 458 TADERNEANELLGNFNHPNNEPGINGLSISV 488
A E A +L N + P + +I +
Sbjct: 462 RAGELEAARDLFSNLSSKGLHPSVWTYNIMI 492
Score = 148 bits (373), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 95/396 (23%), Positives = 181/396 (45%), Gaps = 6/396 (1%)
Query: 97 MDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRR 156
+DF L+T+ K ++ + + M+ G P+V + L+ ++ R A ++ +
Sbjct: 66 VDFAKLLTSIAKMKHYSTVLSLSTQMDSFGVPPNVYTLNILINSFCHLNRVGFAFSVLAK 125
Query: 157 MQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKK 216
+ G +P T+ +++ K EA +F ++DE +P+ + +I K
Sbjct: 126 ILKLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMIDE---GFQPNVVTYGTLINGLCK 182
Query: 217 AGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSK---IYDQMQRAGLQPDVVS 273
G A +L M + Q V Y S++ ++V++ ++ QM G+ PD+ +
Sbjct: 183 VGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAFNLFSQMVGQGISPDIFT 242
Query: 274 YALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMR 333
Y L++A + + +M+++ + P ++ ++DA G V +A + M
Sbjct: 243 YTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVVDALCKEGKVTEAHEIVDMMI 302
Query: 334 RDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLE 393
+ PD+ +YTT++ + S+M+ A K F + + GF P+VI+Y TLI GY K++ ++
Sbjct: 303 QRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGFAPDVISYTTLINGYCKIHKID 362
Query: 394 KMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILL 453
K M ++++M P+ + T+M A+ + EM + G PD +ILL
Sbjct: 363 KAMYLFEEMCRKEWIPDTKTYNTLMYGLCHVGRLQDAIALFHEMVARGQMPDLVTYSILL 422
Query: 454 SLAKTADERNEANELLGNFNHPNNEPGINGLSISVD 489
EA LL N P I +I +D
Sbjct: 423 DSLCKNRHLEEAMALLKAIEASNLNPDIQVYNIIID 458
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 106/419 (25%), Positives = 186/419 (44%), Gaps = 48/419 (11%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + + LI K G+ + A ++L M + P VV +T+++++ + + A +F
Sbjct: 169 NVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAFNLF 228
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
+M G P TY ++ ++K + +++ S + PD +F ++
Sbjct: 229 SQMVGQGISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVN---SKILPDVVIFSTVVDAL 285
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSLM---SFETNYKEVSKIYDQMQRAGLQPDV 271
K G +A ++ +M +RGV+ VTY +LM ++ E K++D M R G PDV
Sbjct: 286 CKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGFAPDV 345
Query: 272 VSYALLINAYGK--------------ARRE---------------------EEALAVFEE 296
+SY LIN Y K R+E ++A+A+F E
Sbjct: 346 ISYTTLINGYCKIHKIDKAMYLFEEMCRKEWIPDTKTYNTLMYGLCHVGRLQDAIALFHE 405
Query: 297 MLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASD 356
M+ G P Y+ILLD+ + +++A + K + +PDI Y ++ A +
Sbjct: 406 MVARGQMPDLVTYSILLDSLCKNRHLEEAMALLKAIEASNLNPDIQVYNIIIDGMCRAGE 465
Query: 357 MEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTT 416
+E A F L G P+V TY +I G K L + +++ +M N P+ + T
Sbjct: 466 LEAARDLFSNLSSKGLHPSVWTYNIMIHGLCKRGLLNEANKLFMEMDGNDCSPDGCTYNT 525
Query: 417 IMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADER-----NEANELLG 470
I + +N + A+ +EM + GF D + ++LS+ D R E +LLG
Sbjct: 526 IARGFLQNNETLRAIQLLEEMLARGFSAD--SCFLMLSVLSEDDRRYFIFIPEGFDLLG 582
Score = 128 bits (322), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 83/384 (21%), Positives = 169/384 (44%), Gaps = 6/384 (1%)
Query: 99 FLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQ 158
F LI +G +A + M +G+ P+VV++ L+ + G A + R M+
Sbjct: 138 FTTLIRGLCVEGKIGEALHLFDKMIDEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSME 197
Query: 159 SSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAG 218
+P + Y I+ + + EA +F ++ + SP D + +++
Sbjct: 198 QGNCQPDVVIYTSIIDSLCKDRQVTEAFNLFSQMVGQGISP---DIFTYTSLVHALCNLC 254
Query: 219 GYEKARKLFALMAERGVQQSTVTYNSL---MSFETNYKEVSKIYDQMQRAGLQPDVVSYA 275
++ L M + V ++++ + E E +I D M + G++PDVV+Y
Sbjct: 255 EWKHVTTLLNQMVNSKILPDVVIFSTVVDALCKEGKVTEAHEIVDMMIQRGVEPDVVTYT 314
Query: 276 LLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRD 335
L++ + +EA+ VF+ M+ G P +Y L++ + +D+A +F+ M R
Sbjct: 315 TLMDGHCLQSEMDEAVKVFDMMVRKGFAPDVISYTTLINGYCKIHKIDKAMYLFEEMCRK 374
Query: 336 RCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKM 395
PD +Y T++ + ++ A F + G +P+++TY L+ K +LE+
Sbjct: 375 EWIPDTKTYNTLMYGLCHVGRLQDAIALFHEMVARGQMPDLVTYSILLDSLCKNRHLEEA 434
Query: 396 MEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSL 455
M + + + + P+ ++ I+D + + ++A + + S G P NI++
Sbjct: 435 MALLKAIEASNLNPDIQVYNIIIDGMCRAGELEAARDLFSNLSSKGLHPSVWTYNIMIHG 494
Query: 456 AKTADERNEANELLGNFNHPNNEP 479
NEAN+L + + P
Sbjct: 495 LCKRGLLNEANKLFMEMDGNDCSP 518
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 96/221 (43%)
Query: 269 PDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTV 328
P +V +A L+ + K + L++ +M GV P NIL+++F V A +V
Sbjct: 63 PSIVDFAKLLTSIAKMKHYSTVLSLSTQMDSFGVPPNVYTLNILINSFCHLNRVGFAFSV 122
Query: 329 FKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAK 388
+ + PD ++TT++ + A F ++ +GF PNV+TYGTLI G K
Sbjct: 123 LAKILKLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMIDEGFQPNVVTYGTLINGLCK 182
Query: 389 VNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKA 448
V N + + M +P+ I+T+I+D+ K++ A + +M G PD
Sbjct: 183 VGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAFNLFSQMVGQGISPDIFT 242
Query: 449 KNILLSLAKTADERNEANELLGNFNHPNNEPGINGLSISVD 489
L+ E LL + P + S VD
Sbjct: 243 YTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVVD 283
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 73/297 (24%), Positives = 131/297 (44%), Gaps = 45/297 (15%)
Query: 45 VAVLRSERTRGQPLPKDLVLGTLV-RLKQLKKWNVVSEVLEWLRIQSWWDFNEMDFLMLI 103
V L ++ + LP ++ T+V L + K E+++ + IQ + + + + L+
Sbjct: 259 VTTLLNQMVNSKILPDVVIFSTVVDALCKEGKVTEAHEIVD-MMIQRGVEPDVVTYTTLM 317
Query: 104 TAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGR-------------------- 143
+ Q + ++A KV M +KG+AP V+S+T L+ Y +
Sbjct: 318 DGHCLQSEMDEAVKVFDMMVRKGFAPDVISYTTLINGYCKIHKIDKAMYLFEEMCRKEWI 377
Query: 144 ---------------GGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEV 188
GR ++A A+F M + G P +TY I+L + +EA
Sbjct: 378 PDTKTYNTLMYGLCHVGRLQDAIALFHEMVARGQMPDLVTYSILLDSLCKNRHLEEA--- 434
Query: 189 FMTLLDE-EKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMS 247
M LL E S L PD ++++++I +AG E AR LF+ ++ +G+ S TYN ++
Sbjct: 435 -MALLKAIEASNLNPDIQVYNIIIDGMCRAGELEAARDLFSNLSSKGLHPSVWTYNIMIH 493
Query: 248 FETN---YKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAG 301
E +K++ +M PD +Y + + + A+ + EEML G
Sbjct: 494 GLCKRGLLNEANKLFMEMDGNDCSPDGCTYNTIARGFLQNNETLRAIQLLEEMLARG 550
Score = 43.5 bits (101), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 32/160 (20%), Positives = 60/160 (37%)
Query: 322 VDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGT 381
+D A + F + P I + +L++ ++ G PNV T
Sbjct: 46 LDDALSSFNRLLHMHPPPSIVDFAKLLTSIAKMKHYSTVLSLSTQMDSFGVPPNVYTLNI 105
Query: 382 LIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCG 441
LI + +N + + K+ G +P+ T FTT++ A+ + +M G
Sbjct: 106 LINSFCHLNRVGFAFSVLAKILKLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMIDEG 165
Query: 442 FPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGI 481
F P+ L++ + A LL + N +P +
Sbjct: 166 FQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPDV 205
>gi|359474464|ref|XP_003631475.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
mitochondrial-like [Vitis vinifera]
gi|297742067|emb|CBI33854.3| unnamed protein product [Vitis vinifera]
Length = 767
Score = 155 bits (393), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 96/372 (25%), Positives = 184/372 (49%), Gaps = 6/372 (1%)
Query: 101 MLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSS 160
+LI + KQGD K ++ M PS+VS+++L + + IFR + ++
Sbjct: 365 ILIHGFCKQGDVEKGLYLIEEMKYSNMEPSLVSYSSLFHGLCKKRLSDISLDIFRDLGAA 424
Query: 161 GPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGY 220
G + Y I++K F A ++ ++ ++ L PD F +++ + K G +
Sbjct: 425 GYKYDQTAYSILIKGFCMQGDLDSAHKLMEEMV---RNNLAPDPSNFESLVHGFCKMGLW 481
Query: 221 EKARKLFALMAERGVQQSTVTYNSLM---SFETNYKEVSKIYDQMQRAGLQPDVVSYALL 277
A + F +M E G+ S T N ++ E +E + ++MQ G+ P++ +Y +
Sbjct: 482 VNALEFFNMMLEGGILPSIATCNVIIDAHCREGRVEEALNLMNEMQTQGIFPNLFTYNAV 541
Query: 278 INAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRC 337
IN K R+ E AL +F ML V P+ Y+ L+D FA +A ++ M +
Sbjct: 542 INRLCKERKSERALELFPLMLKRNVLPSVVVYSTLIDGFAKQSNSQKALMLYARMLKIGV 601
Query: 338 SPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMME 397
+PD+ +YT +++ + S M A F+++ ++G P+ I+Y ++I G+ ++ ++ K
Sbjct: 602 TPDMVAYTILINILCHRSRMCEAYNLFKKMTENGMTPDKISYTSVIAGFCRIGDMRKAWA 661
Query: 398 IYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAK 457
++++M G P +T+++D Y K D A + EM+ G PD N+L++ +
Sbjct: 662 LFNEMLQRGHLPTVVTYTSLVDGYCKMNRIDIADMLIDEMKRKGITPDVVTYNVLIAAHR 721
Query: 458 TADERNEANELL 469
++A E+L
Sbjct: 722 RRGNLDKALEML 733
Score = 142 bits (357), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 85/330 (25%), Positives = 171/330 (51%), Gaps = 8/330 (2%)
Query: 92 WDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAE 151
+ +++ + +LI + QGD + A K++ M + AP + +L+ + + G + NA
Sbjct: 426 YKYDQTAYSILIKGFCMQGDLDSAHKLMEEMVRNNLAPDPSNFESLVHGFCKMGLWVNAL 485
Query: 152 AIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSP-LKPDQKMFHMM 210
F M G PS T +I+ + +EA + L++E ++ + P+ ++ +
Sbjct: 486 EFFNMMLEGGILPSIATCNVIIDAHCREGRVEEA----LNLMNEMQTQGIFPNLFTYNAV 541
Query: 211 IYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLM---SFETNYKEVSKIYDQMQRAGL 267
I K E+A +LF LM +R V S V Y++L+ + ++N ++ +Y +M + G+
Sbjct: 542 INRLCKERKSERALELFPLMLKRNVLPSVVVYSTLIDGFAKQSNSQKALMLYARMLKIGV 601
Query: 268 QPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQART 327
PD+V+Y +LIN R EA +F++M + G+ P +Y ++ F G + +A
Sbjct: 602 TPDMVAYTILINILCHRSRMCEAYNLFKKMTENGMTPDKISYTSVIAGFCRIGDMRKAWA 661
Query: 328 VFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYA 387
+F M + P + +YT+++ Y + ++ A+ +K+ G P+V+TY LI +
Sbjct: 662 LFNEMLQRGHLPTVVTYTSLVDGYCKMNRIDIADMLIDEMKRKGITPDVVTYNVLIAAHR 721
Query: 388 KVNNLEKMMEIYDKMRVNGIKPNQTIFTTI 417
+ NL+K +E+ ++M+ NG+ P+ + +
Sbjct: 722 RRGNLDKALEMLNEMKENGVLPDHMTYMML 751
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 97/459 (21%), Positives = 182/459 (39%), Gaps = 80/459 (17%)
Query: 99 FLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQ 158
F +LI + A V K G S S L++ R + ++F M+
Sbjct: 182 FDLLIKVFAANSMLENAVDVFLQAKKTGLELSTRSCNFLLKCLAEANRREFLRSLFEEMK 241
Query: 159 SSGPRPSALTYQIILKLFVEANKFKEAE----EVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
S+GP P+ TY I++ + + N F EA+ + L + E++ P + IY
Sbjct: 242 STGPPPNVFTYTIMMNFYCKGN-FGEADIDTRQATEILEEMERNGESPTVVTYSTYIYGL 300
Query: 215 KKAGGYEKARKLF-ALMAERGVQQSTVTYNSL---MSFETNYKEVSKIYDQMQRAGLQPD 270
+ G E A +L++ G+ + YN++ + + E K+ ++M+ G+ PD
Sbjct: 301 CRVGYVESALDFVRSLISANGLV-NVYCYNAIIHGLCKKGELDEALKVLEEMKSCGISPD 359
Query: 271 VVSYALLINAYGKARREEEALAVFEEM----------------------------LD--- 299
V +Y++LI+ + K E+ L + EEM LD
Sbjct: 360 VYTYSILIHGFCKQGDVEKGLYLIEEMKYSNMEPSLVSYSSLFHGLCKKRLSDISLDIFR 419
Query: 300 ----AGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNAS 355
AG + AY+IL+ F + G +D A + + M R+ +PD ++ +++ +
Sbjct: 420 DLGAAGYKYDQTAYSILIKGFCMQGDLDSAHKLMEEMVRNNLAPDPSNFESLVHGFCKMG 479
Query: 356 DMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQ---- 411
A +FF + + G +P++ T +I + + +E+ + + ++M+ GI PN
Sbjct: 480 LWVNALEFFNMMLEGGILPSIATCNVIIDAHCREGRVEEALNLMNEMQTQGIFPNLFTYN 539
Query: 412 -------------------------------TIFTTIMDAYGKNKDFDSAVVWYKEMESC 440
+++T++D + K + A++ Y M
Sbjct: 540 AVINRLCKERKSERALELFPLMLKRNVLPSVVVYSTLIDGFAKQSNSQKALMLYARMLKI 599
Query: 441 GFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEP 479
G PD A IL+++ EA L P
Sbjct: 600 GVTPDMVAYTILINILCHRSRMCEAYNLFKKMTENGMTP 638
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 68/321 (21%), Positives = 133/321 (41%), Gaps = 29/321 (9%)
Query: 125 KGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKE 184
K A SV+ L++ + +NA +F + + +G S + +LK EAN+
Sbjct: 173 KDAARSVIVFDLLIKVFAANSMLENAVDVFLQAKKTGLELSTRSCNFLLKCLAEANR--- 229
Query: 185 AEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNS 244
E +L +E KS P + ++ + G + +A
Sbjct: 230 -REFLRSLFEEMKSTGPPPNVFTYTIMMNFYCKGNFGEA--------------------- 267
Query: 245 LMSFETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRP 304
+ + ++ ++I ++M+R G P VV+Y+ I + E AL ++ A
Sbjct: 268 ----DIDTRQATEILEEMERNGESPTVVTYSTYIYGLCRVGYVESALDFVRSLISANGLV 323
Query: 305 THKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFF 364
YN ++ G +D+A V + M+ SPD+ +Y+ ++ + D+E
Sbjct: 324 NVYCYNAIIHGLCKKGELDEALKVLEEMKSCGISPDVYTYSILIHGFCKQGDVEKGLYLI 383
Query: 365 RRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKN 424
+K P++++Y +L G K + ++I+ + G K +QT ++ ++ +
Sbjct: 384 EEMKYSNMEPSLVSYSSLFHGLCKKRLSDISLDIFRDLGAAGYKYDQTAYSILIKGFCMQ 443
Query: 425 KDFDSAVVWYKEMESCGFPPD 445
D DSA +EM PD
Sbjct: 444 GDLDSAHKLMEEMVRNNLAPD 464
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 101/223 (45%), Gaps = 8/223 (3%)
Query: 270 DVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVF 329
V+ + LLI + E A+ VF + G+ + ++ N LL A + + R++F
Sbjct: 178 SVIVFDLLIKVFAANSMLENAVDVFLQAKKTGLELSTRSCNFLLKCLAEANRREFLRSLF 237
Query: 330 KCMRRDRCSPDICSYTTMLSAYVNAS------DMEGAEKFFRRLKQDGFVPNVITYGTLI 383
+ M+ P++ +YT M++ Y + D A + ++++G P V+TY T I
Sbjct: 238 EEMKSTGPPPNVFTYTIMMNFYCKGNFGEADIDTRQATEILEEMERNGESPTVVTYSTYI 297
Query: 384 KGYAKVNNLEKMME-IYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGF 442
G +V +E ++ + + NG+ N + I+ K + D A+ +EM+SCG
Sbjct: 298 YGLCRVGYVESALDFVRSLISANGL-VNVYCYNAIIHGLCKKGELDEALKVLEEMKSCGI 356
Query: 443 PPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGINGLS 485
PD +IL+ + + L+ + N EP + S
Sbjct: 357 SPDVYTYSILIHGFCKQGDVEKGLYLIEEMKYSNMEPSLVSYS 399
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/122 (23%), Positives = 64/122 (52%), Gaps = 5/122 (4%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
+++ + +I + + GD KA + + M ++G+ P+VV++T+L++ Y + R A+ +
Sbjct: 639 DKISYTSVIAGFCRIGDMRKAWALFNEMLQRGHLPTVVTYTSLVDGYCKMNRIDIADMLI 698
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEK-SPLKPDQKMFHMMIYM 213
M+ G P +TY +++ +A E +L+E K + + PD + M+ ++
Sbjct: 699 DEMKRKGITPDVVTYNVLIAAHRRRGNLDKALE----MLNEMKENGVLPDHMTYMMLEWL 754
Query: 214 YK 215
K
Sbjct: 755 LK 756
>gi|224113413|ref|XP_002316488.1| predicted protein [Populus trichocarpa]
gi|222865528|gb|EEF02659.1| predicted protein [Populus trichocarpa]
Length = 941
Score = 155 bits (393), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 104/409 (25%), Positives = 195/409 (47%), Gaps = 40/409 (9%)
Query: 72 QLKKWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSV 131
Q + W V E ++ S +F +++ Y ++GD ++A + M +G PS
Sbjct: 275 QPENWQAVVSAFERIKKPS-----RREFGLMVGYYARRGDMHRARQTFESMRARGIDPSS 329
Query: 132 VSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANK-------FKE 184
+T+L+ AY G + A + R+M G S +TY I++ F + FK+
Sbjct: 330 HVYTSLIHAYAVGRDMEEALSCVRKMNEEGIEMSLVTYSIVVGGFAKFGNAEAADCWFKK 389
Query: 185 AEEVFMTL-----------------LDEEKSPLKPDQK--------MFHMMIYMYKKAGG 219
A+E L +D ++ ++ ++ ++H M+ Y
Sbjct: 390 AKERHTNLNAYIYGNIIYAYCQACNMDRAEALVREMEEEGIDAPLDIYHTMMDGYTMIRN 449
Query: 220 YEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSK---IYDQMQRAGLQPDVVSYAL 276
EK +F + E G S +TY L++ T +VSK + M+ G++ ++ +Y++
Sbjct: 450 EEKCLIVFKRLKECGFAPSVITYGCLINMYTKIGKVSKALEVSKMMKSVGIKHNMKTYSM 509
Query: 277 LINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDR 336
LIN + K + A AVFE+++ G++P YN ++ AF G +D+A + K M+++R
Sbjct: 510 LINGFLKLKDWTNAFAVFEDVIKDGLKPDVVLYNNIIKAFCGMGNMDRAIHMVKEMQKER 569
Query: 337 CSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMM 396
C P ++ ++ + A +M A + F +++ G +P V T+ L+ G + +EK +
Sbjct: 570 CRPTSRTFMPIIHGFARAGEMRRALEIFDMMRRSGCIPTVHTFNALVLGLVEKRKMEKAV 629
Query: 397 EIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPD 445
EI D+M + G+ P++ +TTIM Y D A ++ +M + G D
Sbjct: 630 EILDEMALAGVSPDEHTYTTIMHGYAALGDTGKAFEYFTKMRNEGLQLD 678
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 104/389 (26%), Positives = 187/389 (48%), Gaps = 14/389 (3%)
Query: 59 PKDLVLGTLV----RLKQLKKWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNK 114
P + G L+ ++ ++ K VS++++ + I+ N + MLI + K D+
Sbjct: 467 PSVITYGCLINMYTKIGKVSKALEVSKMMKSVGIKH----NMKTYSMLINGFLKLKDWTN 522
Query: 115 AEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILK 174
A V + K G P VV + +++A+ G A + + MQ RP++ T+ I+
Sbjct: 523 AFAVFEDVIKDGLKPDVVLYNNIIKAFCGMGNMDRAIHMVKEMQKERCRPTSRTFMPIIH 582
Query: 175 LFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERG 234
F A + + A E+F + +S P F+ ++ + EKA ++ MA G
Sbjct: 583 GFARAGEMRRALEIFDMM---RRSGCIPTVHTFNALVLGLVEKRKMEKAVEILDEMALAG 639
Query: 235 VQQSTVTYNSLMSFETNYKEVSKIYD---QMQRAGLQPDVVSYALLINAYGKARREEEAL 291
V TY ++M + K ++ +M+ GLQ DV +Y L+ A K+ R + AL
Sbjct: 640 VSPDEHTYTTIMHGYAALGDTGKAFEYFTKMRNEGLQLDVFTYEALLKACCKSGRMQSAL 699
Query: 292 AVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAY 351
AV EM + YNIL+D +A G + +A + + M ++ PDI +YT+ ++A
Sbjct: 700 AVTREMNAQKIPRNTFVYNILIDGWARRGDIWEAADLMQQMNQEGVQPDIHTYTSFINAC 759
Query: 352 VNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQ 411
A DM A K ++ G PNV TY TLI G+A + EK + ++++++ G+KP++
Sbjct: 760 CKAGDMLRATKTMEEMEAAGVKPNVKTYTTLIHGWANASLPEKALSCFEELKLAGLKPDK 819
Query: 412 TIFTTIMDAYGKNKDFDSAVVWYKEMESC 440
++ +M + A ++ + C
Sbjct: 820 AVYHCLMTSLLSRATVAEAYIYSGILSIC 848
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 60/254 (23%), Positives = 111/254 (43%), Gaps = 32/254 (12%)
Query: 201 KPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSKIYD 260
KP ++ F +M+ Y + G +AR+ F M RG+
Sbjct: 291 KPSRREFGLMVGYYARRGDMHRARQTFESMRARGID------------------------ 326
Query: 261 QMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISG 320
P Y LI+AY R EEAL+ +M + G+ + Y+I++ FA G
Sbjct: 327 --------PSSHVYTSLIHAYAVGRDMEEALSCVRKMNEEGIEMSLVTYSIVVGGFAKFG 378
Query: 321 MVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYG 380
+ A FK + + + Y ++ AY A +M+ AE R ++++G + Y
Sbjct: 379 NAEAADCWFKKAKERHTNLNAYIYGNIIYAYCQACNMDRAEALVREMEEEGIDAPLDIYH 438
Query: 381 TLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESC 440
T++ GY + N EK + ++ +++ G P+ + +++ Y K A+ K M+S
Sbjct: 439 TMMDGYTMIRNEEKCLIVFKRLKECGFAPSVITYGCLINMYTKIGKVSKALEVSKMMKSV 498
Query: 441 GFPPDQKAKNILLS 454
G + K ++L++
Sbjct: 499 GIKHNMKTYSMLIN 512
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/205 (20%), Positives = 97/205 (47%), Gaps = 4/205 (1%)
Query: 251 NYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYN 310
N++ V ++++++ P + L++ Y + A FE M G+ P+ Y
Sbjct: 278 NWQAVVSAFERIKK----PSRREFGLMVGYYARRGDMHRARQTFESMRARGIDPSSHVYT 333
Query: 311 ILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQD 370
L+ A+A+ +++A + + M + + +Y+ ++ + + E A+ +F++ K+
Sbjct: 334 SLIHAYAVGRDMEEALSCVRKMNEEGIEMSLVTYSIVVGGFAKFGNAEAADCWFKKAKER 393
Query: 371 GFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSA 430
N YG +I Y + N+++ + +M GI I+ T+MD Y ++ +
Sbjct: 394 HTNLNAYIYGNIIYAYCQACNMDRAEALVREMEEEGIDAPLDIYHTMMDGYTMIRNEEKC 453
Query: 431 VVWYKEMESCGFPPDQKAKNILLSL 455
++ +K ++ CGF P L+++
Sbjct: 454 LIVFKRLKECGFAPSVITYGCLINM 478
>gi|242065464|ref|XP_002454021.1| hypothetical protein SORBIDRAFT_04g023230 [Sorghum bicolor]
gi|241933852|gb|EES06997.1| hypothetical protein SORBIDRAFT_04g023230 [Sorghum bicolor]
Length = 729
Score = 155 bits (392), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 97/414 (23%), Positives = 189/414 (45%), Gaps = 39/414 (9%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
+E+ F ++T+ +QG ++A KV+ M++ G P +V+++++++ GR +A +
Sbjct: 301 DEVTFNTIVTSLCQQGLVDRAIKVVDHMSEHGCIPDIVTYSSILDGLCDVGRVDDAVELL 360
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
R++S G +P + Y +LK +++ AEE+ ++ S PD+ F+ +I
Sbjct: 361 SRLKSYGCKPDTIAYTTVLKGLCSIEQWEHAEELMAEMV---CSDCPPDEVTFNTVIASL 417
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVS---KIYDQMQRAGLQPDV 271
+ G ++A K+ M+E G VTYNS++ N + + ++ +Q G +PD+
Sbjct: 418 CQKGLVDRAIKVVEQMSENGCNPDIVTYNSIIDGLCNERCIDDAMELLSNLQSYGCKPDI 477
Query: 272 VSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKC 331
V++ L+ R E+A + M+ + P +N ++ + G++ QA K
Sbjct: 478 VTFNTLLKGLCSVDRWEDAEQLMVNMMHSDCPPDATTFNTVITSLCQKGLLLQAIETLKI 537
Query: 332 MRRDRC---------------------------------SPDICSYTTMLSAYVNASDME 358
M + C +PD+ +Y T++S A ME
Sbjct: 538 MAENGCIPNQSTYNIVVDALLKAGKTQEALKLLSGMTNGTPDLITYNTVISNITKAGKME 597
Query: 359 GAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIM 418
A R + +G P+ ITY +L G + + ++ + + +++ G+ P+ T + I+
Sbjct: 598 EALDLLRVMVSNGLSPDTITYRSLAYGICREDGTDRAIRMLCRLQDMGLSPDATFYNDIL 657
Query: 419 DAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNF 472
+ +N D A+ + M S G PD+ ILL +EA +LL N
Sbjct: 658 LGFCQNWRTDIAIDCFAHMVSSGCMPDESTYIILLEALAYECLLDEAKQLLVNL 711
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 94/379 (24%), Positives = 177/379 (46%), Gaps = 6/379 (1%)
Query: 99 FLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQ 158
+ +L+ A K + +A +L M KG P +V++ L+ A G A I +
Sbjct: 200 YSILLDATCKASGYRQAMVLLDEMRAKGCEPDIVTYNVLINAMCNEGDVDEALNILSDLP 259
Query: 159 SSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAG 218
S G +P A+TY +LK + ++KE EE+F + + +P D+ F+ ++ + G
Sbjct: 260 SHGCKPDAVTYTPVLKSLCGSERWKEVEELFAEMASNKCAP---DEVTFNTIVTSLCQQG 316
Query: 219 GYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSKIYDQMQRA---GLQPDVVSYA 275
++A K+ M+E G VTY+S++ + V + + R G +PD ++Y
Sbjct: 317 LVDRAIKVVDHMSEHGCIPDIVTYSSILDGLCDVGRVDDAVELLSRLKSYGCKPDTIAYT 376
Query: 276 LLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRD 335
++ + E A + EM+ + P +N ++ + G+VD+A V + M +
Sbjct: 377 TVLKGLCSIEQWEHAEELMAEMVCSDCPPDEVTFNTVIASLCQKGLVDRAIKVVEQMSEN 436
Query: 336 RCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKM 395
C+PDI +Y +++ N ++ A + L+ G P+++T+ TL+KG V+ E
Sbjct: 437 GCNPDIVTYNSIIDGLCNERCIDDAMELLSNLQSYGCKPDIVTFNTLLKGLCSVDRWEDA 496
Query: 396 MEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSL 455
++ M + P+ T F T++ + + A+ K M G P+Q NI++
Sbjct: 497 EQLMVNMMHSDCPPDATTFNTVITSLCQKGLLLQAIETLKIMAENGCIPNQSTYNIVVDA 556
Query: 456 AKTADERNEANELLGNFNH 474
A + EA +LL +
Sbjct: 557 LLKAGKTQEALKLLSGMTN 575
Score = 149 bits (375), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 109/462 (23%), Positives = 208/462 (45%), Gaps = 20/462 (4%)
Query: 27 GKKNWRRLMNQIEEVGSAVAVLRSERTRGQ-----PLPKDLVLGTLVRLKQLKKWNVVSE 81
G K R + Q EE+ A+A++ S + G PLP V+ + +K+L V++
Sbjct: 60 GPKRRLRSLIQREEIDDALALVDSIASGGGSGKCLPLP---VVPCNILIKRLCSGGRVAD 116
Query: 82 VLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAY 141
E + + + ++ Y + G A +++S M + P + L+ A
Sbjct: 117 A-ERVFATLGASATVVTYNTMVNGYCRAGRIEDARRLISGMP---FPPDTFTFNPLIRAL 172
Query: 142 GRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSP-L 200
GR +A A+F M G PS +TY I+L +A+ +++A M LLDE ++
Sbjct: 173 CVRGRVPDALAVFDDMLHRGCSPSVVTYSILLDATCKASGYRQA----MVLLDEMRAKGC 228
Query: 201 KPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLM---SFETNYKEVSK 257
+PD ++++I G ++A + + + G + VTY ++ +KEV +
Sbjct: 229 EPDIVTYNVLINAMCNEGDVDEALNILSDLPSHGCKPDAVTYTPVLKSLCGSERWKEVEE 288
Query: 258 IYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFA 317
++ +M PD V++ ++ + + + A+ V + M + G P Y+ +LD
Sbjct: 289 LFAEMASNKCAPDEVTFNTIVTSLCQQGLVDRAIKVVDHMSEHGCIPDIVTYSSILDGLC 348
Query: 318 ISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVI 377
G VD A + ++ C PD +YTT+L + E AE+ + P+ +
Sbjct: 349 DVGRVDDAVELLSRLKSYGCKPDTIAYTTVLKGLCSIEQWEHAEELMAEMVCSDCPPDEV 408
Query: 378 TYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEM 437
T+ T+I + +++ +++ ++M NG P+ + +I+D + D A+ +
Sbjct: 409 TFNTVIASLCQKGLVDRAIKVVEQMSENGCNPDIVTYNSIIDGLCNERCIDDAMELLSNL 468
Query: 438 ESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEP 479
+S G PD N LL + D +A +L+ N H + P
Sbjct: 469 QSYGCKPDIVTFNTLLKGLCSVDRWEDAEQLMVNMMHSDCPP 510
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 44/207 (21%), Positives = 93/207 (44%), Gaps = 8/207 (3%)
Query: 99 FLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQ 158
F +IT+ ++G +A + L M + G P+ ++ +++A + G+ + A + M
Sbjct: 515 FNTVITSLCQKGLLLQAIETLKIMAENGCIPNQSTYNIVVDALLKAGKTQEALKLLSGMT 574
Query: 159 SSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAG 218
+ P +TY ++ +A K +EA ++ ++ + L PD + + Y +
Sbjct: 575 NG--TPDLITYNTVISNITKAGKMEEALDLLRVMV---SNGLSPDTITYRSLAYGICRED 629
Query: 219 GYEKARKLFALMAERGVQQSTVTYNS-LMSFETNYKEVSKI--YDQMQRAGLQPDVVSYA 275
G ++A ++ + + G+ YN L+ F N++ I + M +G PD +Y
Sbjct: 630 GTDRAIRMLCRLQDMGLSPDATFYNDILLGFCQNWRTDIAIDCFAHMVSSGCMPDESTYI 689
Query: 276 LLINAYGKARREEEALAVFEEMLDAGV 302
+L+ A +EA + + GV
Sbjct: 690 ILLEALAYECLLDEAKQLLVNLCSLGV 716
>gi|224089372|ref|XP_002308709.1| predicted protein [Populus trichocarpa]
gi|222854685|gb|EEE92232.1| predicted protein [Populus trichocarpa]
Length = 1115
Score = 155 bits (392), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 99/397 (24%), Positives = 185/397 (46%), Gaps = 41/397 (10%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + + I G+ G ++A +++ M+ G P VV++T L++A + +A +F
Sbjct: 263 NIYTYTICIRVLGRDGKIDEAYRIMKRMDDDGCGPDVVTYTVLIDALCTARKLDDAMCLF 322
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
+M+SS +P +TY +L F + + E+++ + E PD F +++
Sbjct: 323 TKMKSSSHKPDKVTYVTLLDKFSDCGHLDKVEKIWTEM---EADGYAPDVVTFTILVNAL 379
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSLMS--FETN-YKEVSKIYDQMQRAGLQPDV 271
KAG +A L M ++GV + TYN+L+S N + ++ M+ G++P
Sbjct: 380 CKAGRINEAFDLLDTMRKQGVLPNLHTYNTLISGLLRANRLDDALDLFSNMESLGVEPTA 439
Query: 272 VSYALLINAYG---------------KAR--------------------REEEALAVFEE 296
+Y LLI+ +G KAR R EA A+F E
Sbjct: 440 YTYILLIDYHGKSGHPGKALETFEKMKARGIAPNIVACNASLYSLAEMGRLGEAKAMFNE 499
Query: 297 MLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASD 356
+ +G+ P YN+++ ++ G VD+A + M + +C PD+ +++ A
Sbjct: 500 LKSSGLAPDSVTYNMMMKCYSKVGQVDEAIKLLSEMSKVQCEPDVIVINSLIDTLYKAGR 559
Query: 357 MEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTT 416
+E A + F R+++ P V+TY L+ G K ++K +++++ M +G PN F T
Sbjct: 560 VEEAWQMFCRMEEMNLAPTVVTYNILLAGLGKEGQIQKAVQLFESMNGHGCSPNTITFNT 619
Query: 417 IMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILL 453
++D KN + D A+ + +M + PD N ++
Sbjct: 620 LLDCLCKNDEVDLALKMFYKMTTMNCRPDVLTFNTII 656
Score = 145 bits (365), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 102/407 (25%), Positives = 192/407 (47%), Gaps = 9/407 (2%)
Query: 17 EVFKDAADEAGKKNWRRLMNQI-EEVGSAVAVLRSERTRGQPLPKD--LVLGTLVRLKQL 73
+ F + W +M I E G+ A+L ER + + KD +++ + L +
Sbjct: 708 DFFYQVGSNIDRSFWEDVMGGILTEAGTEKAILFGERLVCRAICKDDSVLIPIIKVLCKH 767
Query: 74 KKWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVS 133
KK +V V + + +LI + + + A + M G AP +
Sbjct: 768 KKTSVARNVFVKFTKELGVKPTLKVYNLLIDGFLEVHNVEVAWNLFEEMKSAGCAPDTFT 827
Query: 134 HTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLL 193
+ +L++A+G+ G+ ++ M + G +P+ +TY +++ V++N+ +A +++ L+
Sbjct: 828 YNSLIDAHGKSGKINELFDLYDEMLTRGCKPNTITYNMVISNLVKSNRLDKAMDLYYNLV 887
Query: 194 DEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYK 253
+ SP F +I K+G + A ++F M G + ++ YN L++
Sbjct: 888 SGDFSP---TPCTFGPLIDGLLKSGRLDDAHEMFDGMVHYGCRPNSAIYNILVNGYGKLG 944
Query: 254 EV---SKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYN 310
V + + +M + G++PD+ SY +L++ A R ++AL FE++ AG+ P AYN
Sbjct: 945 HVDTACEFFKRMVKEGIRPDLKSYTILVDILCIAGRVDDALHYFEKLKQAGLDPDLVAYN 1004
Query: 311 ILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQD 370
++++ S ++A ++F M+ PD+ +Y +++ +E A K + L+
Sbjct: 1005 LMINGLGRSQRTEEALSLFHEMQNRGIVPDLYTYNSLILNLGIVGMIEEAGKIYEELQFI 1064
Query: 371 GFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTI 417
G PNV TY LI+GY N E IY KM V G PN F +
Sbjct: 1065 GLKPNVFTYNALIRGYTLSGNSELAYGIYKKMMVGGCDPNTGTFAQL 1111
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 91/362 (25%), Positives = 172/362 (47%), Gaps = 7/362 (1%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
+++ ++ L+ + G +K EK+ + M GYAP VV+ T L+ A + GR A +
Sbjct: 333 DKVTYVTLLDKFSDCGHLDKVEKIWTEMEADGYAPDVVTFTILVNALCKAGRINEAFDLL 392
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
M+ G P+ TY ++ + AN+ +A ++F + E ++P + ++I +
Sbjct: 393 DTMRKQGVLPNLHTYNTLISGLLRANRLDDALDLFSNM---ESLGVEPTAYTYILLIDYH 449
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYN-SLMSFET--NYKEVSKIYDQMQRAGLQPDV 271
K+G KA + F M RG+ + V N SL S E ++++++ +GL PD
Sbjct: 450 GKSGHPGKALETFEKMKARGIAPNIVACNASLYSLAEMGRLGEAKAMFNELKSSGLAPDS 509
Query: 272 VSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKC 331
V+Y +++ Y K + +EA+ + EM P N L+D +G V++A +F
Sbjct: 510 VTYNMMMKCYSKVGQVDEAIKLLSEMSKVQCEPDVIVINSLIDTLYKAGRVEEAWQMFCR 569
Query: 332 MRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNN 391
M +P + +Y +L+ ++ A + F + G PN IT+ TL+ K +
Sbjct: 570 MEEMNLAPTVVTYNILLAGLGKEGQIQKAVQLFESMNGHGCSPNTITFNTLLDCLCKNDE 629
Query: 392 LEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNI 451
++ ++++ KM +P+ F TI+ + K +A+ + +M+ PD
Sbjct: 630 VDLALKMFYKMTTMNCRPDVLTFNTIIHGFIKQNQIKNAIWLFHQMKKL-LRPDHVTLCT 688
Query: 452 LL 453
LL
Sbjct: 689 LL 690
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 119/491 (24%), Positives = 212/491 (43%), Gaps = 59/491 (12%)
Query: 22 AADEAGKKNWRRLMNQIEEVGSAVAVLRSERTRGQPLPKDLVLGTLVRLKQLKKWNVVSE 81
A D + +++ +V A+ +L SE ++ Q P +V+ +L+ L K V E
Sbjct: 506 APDSVTYNMMMKCYSKVGQVDEAIKLL-SEMSKVQCEPDVIVINSLI--DTLYKAGRVEE 562
Query: 82 VLEWLRIQSWWDFNEMDFL-------MLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSH 134
W Q + EM+ +L+ GK+G KA ++ MN G +P+ ++
Sbjct: 563 A--W---QMFCRMEEMNLAPTVVTYNILLAGLGKEGQIQKAVQLFESMNGHGCSPNTITF 617
Query: 135 TALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLD 194
L++ + A +F +M + RP LT+ I+ F++ N+ K A + L
Sbjct: 618 NTLLDCLCKNDEVDLALKMFYKMTTMNCRPDVLTFNTIIHGFIKQNQIKNA----IWLFH 673
Query: 195 EEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLF--------------------------- 227
+ K L+PD ++ K+G E A ++
Sbjct: 674 QMKKLLRPDHVTLCTLLPGVIKSGQIEDAFRITEDFFYQVGSNIDRSFWEDVMGGILTEA 733
Query: 228 -----ALMAERGVQQSTVTYNS----LMSFETNYKEVS---KIYDQMQR-AGLQPDVVSY 274
L ER V ++ +S ++ +K+ S ++ + + G++P + Y
Sbjct: 734 GTEKAILFGERLVCRAICKDDSVLIPIIKVLCKHKKTSVARNVFVKFTKELGVKPTLKVY 793
Query: 275 ALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRR 334
LLI+ + + E A +FEEM AG P YN L+DA SG +++ ++ M
Sbjct: 794 NLLIDGFLEVHNVEVAWNLFEEMKSAGCAPDTFTYNSLIDAHGKSGKINELFDLYDEMLT 853
Query: 335 DRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEK 394
C P+ +Y ++S V ++ ++ A + L F P T+G LI G K L+
Sbjct: 854 RGCKPNTITYNMVISNLVKSNRLDKAMDLYYNLVSGDFSPTPCTFGPLIDGLLKSGRLDD 913
Query: 395 MMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLS 454
E++D M G +PN I+ +++ YGK D+A ++K M G PD K+ IL+
Sbjct: 914 AHEMFDGMVHYGCRPNSAIYNILVNGYGKLGHVDTACEFFKRMVKEGIRPDLKSYTILVD 973
Query: 455 LAKTADERNEA 465
+ A ++A
Sbjct: 974 ILCIAGRVDDA 984
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 96/403 (23%), Positives = 181/403 (44%), Gaps = 6/403 (1%)
Query: 99 FLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQ 158
F L+ A GK+ + +L M G P++ ++T + GR G+ A I +RM
Sbjct: 232 FSALMVASGKRRNIKTVMGLLEEMESMGLRPNIYTYTICIRVLGRDGKIDEAYRIMKRMD 291
Query: 159 SSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAG 218
G P +TY +++ A K +A +F + + S KPD+ + ++ + G
Sbjct: 292 DDGCGPDVVTYTVLIDALCTARKLDDAMCLFTKM---KSSSHKPDKVTYVTLLDKFSDCG 348
Query: 219 GYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSKIYD---QMQRAGLQPDVVSYA 275
+K K++ M G VT+ L++ +++ +D M++ G+ P++ +Y
Sbjct: 349 HLDKVEKIWTEMEADGYAPDVVTFTILVNALCKAGRINEAFDLLDTMRKQGVLPNLHTYN 408
Query: 276 LLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRD 335
LI+ +A R ++AL +F M GV PT Y +L+D SG +A F+ M+
Sbjct: 409 TLISGLLRANRLDDALDLFSNMESLGVEPTAYTYILLIDYHGKSGHPGKALETFEKMKAR 468
Query: 336 RCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKM 395
+P+I + L + + A+ F LK G P+ +TY ++K Y+KV +++
Sbjct: 469 GIAPNIVACNASLYSLAEMGRLGEAKAMFNELKSSGLAPDSVTYNMMMKCYSKVGQVDEA 528
Query: 396 MEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSL 455
+++ +M +P+ + +++D K + A + ME P NILL+
Sbjct: 529 IKLLSEMSKVQCEPDVIVINSLIDTLYKAGRVEEAWQMFCRMEEMNLAPTVVTYNILLAG 588
Query: 456 AKTADERNEANELLGNFNHPNNEPGINGLSISVDEEDDDDDDD 498
+ +A +L + N P + +D +D+ D
Sbjct: 589 LGKEGQIQKAVQLFESMNGHGCSPNTITFNTLLDCLCKNDEVD 631
Score = 132 bits (333), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 85/319 (26%), Positives = 161/319 (50%), Gaps = 8/319 (2%)
Query: 143 RGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKP 202
RGG + A + +M+ +G +A +Y ++ +++ KEA EV+ ++ E LKP
Sbjct: 172 RGG-LRQAPSALEKMREAGFVLNAYSYNGLIHFLLQSGFCKEALEVYRRMVSEG---LKP 227
Query: 203 DQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSKIYDQM 262
K F ++ K + L M G++ + TY + ++ + Y M
Sbjct: 228 SLKTFSALMVASGKRRNIKTVMGLLEEMESMGLRPNIYTYTICIRVLGRDGKIDEAYRIM 287
Query: 263 QRA---GLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAIS 319
+R G PDVV+Y +LI+A AR+ ++A+ +F +M + +P Y LLD F+
Sbjct: 288 KRMDDDGCGPDVVTYTVLIDALCTARKLDDAMCLFTKMKSSSHKPDKVTYVTLLDKFSDC 347
Query: 320 GMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITY 379
G +D+ ++ M D +PD+ ++T +++A A + A +++ G +PN+ TY
Sbjct: 348 GHLDKVEKIWTEMEADGYAPDVVTFTILVNALCKAGRINEAFDLLDTMRKQGVLPNLHTY 407
Query: 380 GTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMES 439
TLI G + N L+ ++++ M G++P + ++D +GK+ A+ +++M++
Sbjct: 408 NTLISGLLRANRLDDALDLFSNMESLGVEPTAYTYILLIDYHGKSGHPGKALETFEKMKA 467
Query: 440 CGFPPDQKAKNI-LLSLAK 457
G P+ A N L SLA+
Sbjct: 468 RGIAPNIVACNASLYSLAE 486
Score = 132 bits (331), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 89/394 (22%), Positives = 181/394 (45%), Gaps = 6/394 (1%)
Query: 99 FLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQ 158
+L++ + +G +A L M + G+ + S+ L+ + G K A ++RRM
Sbjct: 162 YLIIFKSLFIRGGLRQAPSALEKMREAGFVLNAYSYNGLIHFLLQSGFCKEALEVYRRMV 221
Query: 159 SSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAG 218
S G +PS T+ L V + K + + V L + E L+P+ + + I + + G
Sbjct: 222 SEGLKPSLKTFS---ALMVASGKRRNIKTVMGLLEEMESMGLRPNIYTYTICIRVLGRDG 278
Query: 219 GYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSK---IYDQMQRAGLQPDVVSYA 275
++A ++ M + G VTY L+ +++ ++ +M+ + +PD V+Y
Sbjct: 279 KIDEAYRIMKRMDDDGCGPDVVTYTVLIDALCTARKLDDAMCLFTKMKSSSHKPDKVTYV 338
Query: 276 LLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRD 335
L++ + ++ ++ EM G P + IL++A +G +++A + MR+
Sbjct: 339 TLLDKFSDCGHLDKVEKIWTEMEADGYAPDVVTFTILVNALCKAGRINEAFDLLDTMRKQ 398
Query: 336 RCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKM 395
P++ +Y T++S + A+ ++ A F ++ G P TY LI + K + K
Sbjct: 399 GVLPNLHTYNTLISGLLRANRLDDALDLFSNMESLGVEPTAYTYILLIDYHGKSGHPGKA 458
Query: 396 MEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSL 455
+E ++KM+ GI PN + + + A + E++S G PD N+++
Sbjct: 459 LETFEKMKARGIAPNIVACNASLYSLAEMGRLGEAKAMFNELKSSGLAPDSVTYNMMMKC 518
Query: 456 AKTADERNEANELLGNFNHPNNEPGINGLSISVD 489
+ +EA +LL + EP + ++ +D
Sbjct: 519 YSKVGQVDEAIKLLSEMSKVQCEPDVIVINSLID 552
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 101/402 (25%), Positives = 176/402 (43%), Gaps = 7/402 (1%)
Query: 83 LEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYG 142
LE +R ++ + N + LI + G +A +V M +G PS+ + +ALM A G
Sbjct: 182 LEKMR-EAGFVLNAYSYNGLIHFLLQSGFCKEALEVYRRMVSEGLKPSLKTFSALMVASG 240
Query: 143 RGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKP 202
+ K + M+S G RP+ TY I +++ K EA + M +D++ P
Sbjct: 241 KRRNIKTVMGLLEEMESMGLRPNIYTYTICIRVLGRDGKIDEAYRI-MKRMDDDGC--GP 297
Query: 203 DQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLM---SFETNYKEVSKIY 259
D + ++I A + A LF M + VTY +L+ S + +V KI+
Sbjct: 298 DVVTYTVLIDALCTARKLDDAMCLFTKMKSSSHKPDKVTYVTLLDKFSDCGHLDKVEKIW 357
Query: 260 DQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAIS 319
+M+ G PDVV++ +L+NA KA R EA + + M GV P YN L+ +
Sbjct: 358 TEMEADGYAPDVVTFTILVNALCKAGRINEAFDLLDTMRKQGVLPNLHTYNTLISGLLRA 417
Query: 320 GMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITY 379
+D A +F M P +Y ++ + + A + F ++K G PN++
Sbjct: 418 NRLDDALDLFSNMESLGVEPTAYTYILLIDYHGKSGHPGKALETFEKMKARGIAPNIVAC 477
Query: 380 GTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMES 439
+ A++ L + ++++++ +G+ P+ + +M Y K D A+ EM
Sbjct: 478 NASLYSLAEMGRLGEAKAMFNELKSSGLAPDSVTYNMMMKCYSKVGQVDEAIKLLSEMSK 537
Query: 440 CGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGI 481
PD N L+ A EA ++ N P +
Sbjct: 538 VQCEPDVIVINSLIDTLYKAGRVEEAWQMFCRMEEMNLAPTV 579
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 90/339 (26%), Positives = 156/339 (46%), Gaps = 40/339 (11%)
Query: 97 MDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRR 156
+ F +L+ A K G N+A +L M K+G P++ ++ L+ R R +A +F
Sbjct: 370 VTFTILVNALCKAGRINEAFDLLDTMRKQGVLPNLHTYNTLISGLLRANRLDDALDLFSN 429
Query: 157 MQSSGPRPSALTYQIILKLFVEANKFKEAEEVF------------------------MTL 192
M+S G P+A TY +++ ++ +A E F M
Sbjct: 430 MESLGVEPTAYTYILLIDYHGKSGHPGKALETFEKMKARGIAPNIVACNASLYSLAEMGR 489
Query: 193 LDEEK--------SPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNS 244
L E K S L PD ++MM+ Y K G ++A KL + M++ + + NS
Sbjct: 490 LGEAKAMFNELKSSGLAPDSVTYNMMMKCYSKVGQVDEAIKLLSEMSKVQCEPDVIVINS 549
Query: 245 LMSFETNYK-----EVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLD 299
L+ +T YK E +++ +M+ L P VV+Y +L+ GK + ++A+ +FE M
Sbjct: 550 LI--DTLYKAGRVEEAWQMFCRMEEMNLAPTVVTYNILLAGLGKEGQIQKAVQLFESMNG 607
Query: 300 AGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEG 359
G P +N LLD + VD A +F M C PD+ ++ T++ ++ + ++
Sbjct: 608 HGCSPNTITFNTLLDCLCKNDEVDLALKMFYKMTTMNCRPDVLTFNTIIHGFIKQNQIKN 667
Query: 360 AEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEI 398
A F ++K+ P+ +T TL+ G K +E I
Sbjct: 668 AIWLFHQMKKL-LRPDHVTLCTLLPGVIKSGQIEDAFRI 705
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 78/297 (26%), Positives = 144/297 (48%), Gaps = 8/297 (2%)
Query: 161 GPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSP-LKPDQKMFHMMIYMYKKAGG 219
G +P+ Y +++ F+E + EV L +E KS PD ++ +I + K+G
Sbjct: 785 GVKPTLKVYNLLIDGFLEVHNV----EVAWNLFEEMKSAGCAPDTFTYNSLIDAHGKSGK 840
Query: 220 YEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSK---IYDQMQRAGLQPDVVSYAL 276
+ L+ M RG + +T+TYN ++S + K +Y + P ++
Sbjct: 841 INELFDLYDEMLTRGCKPNTITYNMVISNLVKSNRLDKAMDLYYNLVSGDFSPTPCTFGP 900
Query: 277 LINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDR 336
LI+ K+ R ++A +F+ M+ G RP YNIL++ + G VD A FK M ++
Sbjct: 901 LIDGLLKSGRLDDAHEMFDGMVHYGCRPNSAIYNILVNGYGKLGHVDTACEFFKRMVKEG 960
Query: 337 CSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMM 396
PD+ SYT ++ A ++ A +F +LKQ G P+++ Y +I G + E+ +
Sbjct: 961 IRPDLKSYTILVDILCIAGRVDDALHYFEKLKQAGLDPDLVAYNLMINGLGRSQRTEEAL 1020
Query: 397 EIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILL 453
++ +M+ GI P+ + +++ G + A Y+E++ G P+ N L+
Sbjct: 1021 SLFHEMQNRGIVPDLYTYNSLILNLGIVGMIEEAGKIYEELQFIGLKPNVFTYNALI 1077
Score = 115 bits (287), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 67/285 (23%), Positives = 142/285 (49%), Gaps = 5/285 (1%)
Query: 172 ILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMA 231
I+K+ + K A VF+ E +KP K+++++I + + E A LF M
Sbjct: 760 IIKVLCKHKKTSVARNVFVKFTKELG--VKPTLKVYNLLIDGFLEVHNVEVAWNLFEEMK 817
Query: 232 ERGVQQSTVTYNSLMSFETNYKEVSKI---YDQMQRAGLQPDVVSYALLINAYGKARREE 288
G T TYNSL+ +++++ YD+M G +P+ ++Y ++I+ K+ R +
Sbjct: 818 SAGCAPDTFTYNSLIDAHGKSGKINELFDLYDEMLTRGCKPNTITYNMVISNLVKSNRLD 877
Query: 289 EALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTML 348
+A+ ++ ++ PT + L+D SG +D A +F M C P+ Y ++
Sbjct: 878 KAMDLYYNLVSGDFSPTPCTFGPLIDGLLKSGRLDDAHEMFDGMVHYGCRPNSAIYNILV 937
Query: 349 SAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIK 408
+ Y ++ A +FF+R+ ++G P++ +Y L+ ++ + ++K++ G+
Sbjct: 938 NGYGKLGHVDTACEFFKRMVKEGIRPDLKSYTILVDILCIAGRVDDALHYFEKLKQAGLD 997
Query: 409 PNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILL 453
P+ + +++ G+++ + A+ + EM++ G PD N L+
Sbjct: 998 PDLVAYNLMINGLGRSQRTEEALSLFHEMQNRGIVPDLYTYNSLI 1042
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/222 (21%), Positives = 101/222 (45%), Gaps = 3/222 (1%)
Query: 235 VQQSTVTYNSLMSFETNYKEV---SKIYDQMQRAGLQPDVVSYALLINAYGKARREEEAL 291
V +T T N ++ ++ V + ++D MQR ++ +V +Y ++ + +A
Sbjct: 120 VVHTTETCNHMLEILRVHRRVEDMAFVFDLMQRQIIRRNVDTYLIIFKSLFIRGGLRQAP 179
Query: 292 AVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAY 351
+ E+M +AG +YN L+ SG +A V++ M + P + +++ ++ A
Sbjct: 180 SALEKMREAGFVLNAYSYNGLIHFLLQSGFCKEALEVYRRMVSEGLKPSLKTFSALMVAS 239
Query: 352 VNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQ 411
+++ ++ G PN+ TY I+ + +++ I +M +G P+
Sbjct: 240 GKRRNIKTVMGLLEEMESMGLRPNIYTYTICIRVLGRDGKIDEAYRIMKRMDDDGCGPDV 299
Query: 412 TIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILL 453
+T ++DA + D A+ + +M+S PD+ LL
Sbjct: 300 VTYTVLIDALCTARKLDDAMCLFTKMKSSSHKPDKVTYVTLL 341
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/195 (23%), Positives = 89/195 (45%)
Query: 285 RREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSY 344
RR E+ VF+ M +R Y I+ + I G + QA + + MR + SY
Sbjct: 138 RRVEDMAFVFDLMQRQIIRRNVDTYLIIFKSLFIRGGLRQAPSALEKMREAGFVLNAYSY 197
Query: 345 TTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRV 404
++ + + + A + +RR+ +G P++ T+ L+ K N++ +M + ++M
Sbjct: 198 NGLIHFLLQSGFCKEALEVYRRMVSEGLKPSLKTFSALMVASGKRRNIKTVMGLLEEMES 257
Query: 405 NGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNE 464
G++PN +T + G++ D A K M+ G PD +L+ TA + ++
Sbjct: 258 MGLRPNIYTYTICIRVLGRDGKIDEAYRIMKRMDDDGCGPDVVTYTVLIDALCTARKLDD 317
Query: 465 ANELLGNFNHPNNEP 479
A L +++P
Sbjct: 318 AMCLFTKMKSSSHKP 332
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/188 (21%), Positives = 84/188 (44%)
Query: 302 VRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAE 361
V T + N +L+ + V+ VF M+R ++ +Y + + + A
Sbjct: 120 VVHTTETCNHMLEILRVHRRVEDMAFVFDLMQRQIIRRNVDTYLIIFKSLFIRGGLRQAP 179
Query: 362 KFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAY 421
++++ GFV N +Y LI + ++ +E+Y +M G+KP+ F+ +M A
Sbjct: 180 SALEKMREAGFVLNAYSYNGLIHFLLQSGFCKEALEVYRRMVSEGLKPSLKTFSALMVAS 239
Query: 422 GKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGI 481
GK ++ + + +EMES G P+ I + + + +EA ++ + P +
Sbjct: 240 GKRRNIKTVMGLLEEMESMGLRPNIYTYTICIRVLGRDGKIDEAYRIMKRMDDDGCGPDV 299
Query: 482 NGLSISVD 489
++ +D
Sbjct: 300 VTYTVLID 307
>gi|302793330|ref|XP_002978430.1| hypothetical protein SELMODRAFT_108734 [Selaginella moellendorffii]
gi|300153779|gb|EFJ20416.1| hypothetical protein SELMODRAFT_108734 [Selaginella moellendorffii]
Length = 475
Score = 155 bits (392), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 96/358 (26%), Positives = 167/358 (46%), Gaps = 8/358 (2%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQS-- 159
+I K G + A +L M K+GY P + +H+ L+ + + + A+ + M
Sbjct: 55 VIQELCKAGRVDSALSLLETMIKRGYCPDMATHSMLINELCKADKIQEAQEFLQGMNRTI 114
Query: 160 SGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGG 219
S S +Y +L +A K +A +F T++ E + PD + ++I + K
Sbjct: 115 STRASSCFSYNSLLNSLCKAKKVHQAFAIFSTMVSERS--VVPDVVSYSILIDGFCKIDE 172
Query: 220 YEKARKLFALMAERGVQQSTVTYNSLMS---FETNYKEVSKIYDQMQRAGLQPDVVSYAL 276
+A KL+ M + + TYN+ ++ + + +Y++M AG PDV++Y+
Sbjct: 173 LGRAEKLYKQMIDLNCVPNVTTYNAFLNGLMRKGRIADAQGVYEEMISAGCSPDVITYST 232
Query: 277 LINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDR 336
LI+ + AR+ ++A +FE M+ G RP YN LL D+A +F+ M
Sbjct: 233 LIHGFSLARKHDQAHELFEAMISRGCRPNAVTYNCLLHGLCKESKPDEAHELFRKMVERG 292
Query: 337 CSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMM 396
C PD +YTT+L + N +E A + F + G P+V+ Y L+KG+ + +
Sbjct: 293 CDPDKVTYTTLLYGFCNVGKIEQAVEVFDEMVSKGHDPDVVAYNCLLKGFFRAGKPGEAR 352
Query: 397 EIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMES-CGFPPDQKAKNILL 453
+++ M KP+ ++D K K D AV ++ ME G PD N L+
Sbjct: 353 QLFQVMVSRECKPDTVSHNIMIDGLSKAKRLDDAVEVFERMEQDHGCSPDLVTYNSLI 410
Score = 128 bits (321), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 89/342 (26%), Positives = 162/342 (47%), Gaps = 9/342 (2%)
Query: 133 SHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTL 192
H+ + E + GR +A ++ M G P T+ +++ +A+K +EA+E F+
Sbjct: 52 CHSVIQE-LCKAGRVDSALSLLETMIKRGYCPDMATHSMLINELCKADKIQEAQE-FLQG 109
Query: 193 LDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALM-AERGVQQSTVTYNSLMSFETN 251
++ S ++ ++ KA +A +F+ M +ER V V+Y+ L+
Sbjct: 110 MNRTISTRASSCFSYNSLLNSLCKAKKVHQAFAIFSTMVSERSVVPDVVSYSILIDGFCK 169
Query: 252 YKEVS---KIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKA 308
E+ K+Y QM P+V +Y +N + R +A V+EEM+ AG P
Sbjct: 170 IDELGRAEKLYKQMIDLNCVPNVTTYNAFLNGLMRKGRIADAQGVYEEMISAGCSPDVIT 229
Query: 309 YNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLK 368
Y+ L+ F+++ DQA +F+ M C P+ +Y +L S + A + FR++
Sbjct: 230 YSTLIHGFSLARKHDQAHELFEAMISRGCRPNAVTYNCLLHGLCKESKPDEAHELFRKMV 289
Query: 369 QDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFD 428
+ G P+ +TY TL+ G+ V +E+ +E++D+M G P+ + ++ + +
Sbjct: 290 ERGCDPDKVTYTTLLYGFCNVGKIEQAVEVFDEMVSKGHDPDVVAYNCLLKGFFRAGKPG 349
Query: 429 SAVVWYKEMESCGFPPDQKAKNIL---LSLAKTADERNEANE 467
A ++ M S PD + NI+ LS AK D+ E E
Sbjct: 350 EARQLFQVMVSRECKPDTVSHNIMIDGLSKAKRLDDAVEVFE 391
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 74/293 (25%), Positives = 146/293 (49%), Gaps = 7/293 (2%)
Query: 97 MDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRR 156
+ + +LI + K + +AEK+ M P+V ++ A + R GR +A+ ++
Sbjct: 158 VSYSILIDGFCKIDELGRAEKLYKQMIDLNCVPNVTTYNAFLNGLMRKGRIADAQGVYEE 217
Query: 157 MQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKK 216
M S+G P +TY ++ F A K +A E+F ++ +P+ ++ +++ K
Sbjct: 218 MISAGCSPDVITYSTLIHGFSLARKHDQAHELFEAMISR---GCRPNAVTYNCLLHGLCK 274
Query: 217 AGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSK---IYDQMQRAGLQPDVVS 273
++A +LF M ERG VTY +L+ N ++ + ++D+M G PDVV+
Sbjct: 275 ESKPDEAHELFRKMVERGCDPDKVTYTTLLYGFCNVGKIEQAVEVFDEMVSKGHDPDVVA 334
Query: 274 YALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMR 333
Y L+ + +A + EA +F+ M+ +P ++NI++D + + +D A VF+ M
Sbjct: 335 YNCLLKGFFRAGKPGEARQLFQVMVSRECKPDTVSHNIMIDGLSKAKRLDDAVEVFERME 394
Query: 334 RDR-CSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKG 385
+D CSPD+ +Y +++ + A K F+ + + P+ + L++
Sbjct: 395 QDHGCSPDLVTYNSLIFGLCGEQRLSEAMKVFKEIDRLKLSPDPHAFNVLLEA 447
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 92/348 (26%), Positives = 158/348 (45%), Gaps = 14/348 (4%)
Query: 132 VSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSAL---TYQIILKLFVEANKFKEAEEV 188
V+ TA + + G+ + A R MQ S T +++ +A + A +
Sbjct: 12 VAWTAFLGGLCKSGKIEQAFEACRTMQESLSSSQPPSSGTCHSVIQELCKAGRVDSALSL 71
Query: 189 FMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQ---QSTVTYNSL 245
T++ K PD M+I KA ++A++ M R + S +YNSL
Sbjct: 72 LETMI---KRGYCPDMATHSMLINELCKADKIQEAQEFLQGM-NRTISTRASSCFSYNSL 127
Query: 246 MSFETNYKEVSK---IYDQM-QRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAG 301
++ K+V + I+ M + PDVVSY++LI+ + K A ++++M+D
Sbjct: 128 LNSLCKAKKVHQAFAIFSTMVSERSVVPDVVSYSILIDGFCKIDELGRAEKLYKQMIDLN 187
Query: 302 VRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAE 361
P YN L+ G + A+ V++ M CSPD+ +Y+T++ + A + A
Sbjct: 188 CVPNVTTYNAFLNGLMRKGRIADAQGVYEEMISAGCSPDVITYSTLIHGFSLARKHDQAH 247
Query: 362 KFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAY 421
+ F + G PN +TY L+ G K + ++ E++ KM G P++ +TT++ +
Sbjct: 248 ELFEAMISRGCRPNAVTYNCLLHGLCKESKPDEAHELFRKMVERGCDPDKVTYTTLLYGF 307
Query: 422 GKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELL 469
+ AV + EM S G PD A N LL A + EA +L
Sbjct: 308 CNVGKIEQAVEVFDEMVSKGHDPDVVAYNCLLKGFFRAGKPGEARQLF 355
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 60/237 (25%), Positives = 117/237 (49%), Gaps = 7/237 (2%)
Query: 88 IQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRY 147
I + + + + LI + ++A ++ M +G P+ V++ L+ + +
Sbjct: 219 ISAGCSPDVITYSTLIHGFSLARKHDQAHELFEAMISRGCRPNAVTYNCLLHGLCKESKP 278
Query: 148 KNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMF 207
A +FR+M G P +TY +L F K ++A EVF ++ + P D +
Sbjct: 279 DEAHELFRKMVERGCDPDKVTYTTLLYGFCNVGKIEQAVEVFDEMVSKGHDP---DVVAY 335
Query: 208 HMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVS---KIYDQM-Q 263
+ ++ + +AG +AR+LF +M R + TV++N ++ + K + +++++M Q
Sbjct: 336 NCLLKGFFRAGKPGEARQLFQVMVSRECKPDTVSHNIMIDGLSKAKRLDDAVEVFERMEQ 395
Query: 264 RAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISG 320
G PD+V+Y LI +R EA+ VF+E+ + P A+N+LL+A +G
Sbjct: 396 DHGCSPDLVTYNSLIFGLCGEQRLSEAMKVFKEIDRLKLSPDPHAFNVLLEAMYAAG 452
>gi|111154024|dbj|BAF02664.1| pentatricopeptide repeat protein [Physcomitrella patens]
gi|111185880|dbj|BAF02672.1| pentatricopeptide repeat protein [Physcomitrella patens]
Length = 531
Score = 155 bits (392), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 90/338 (26%), Positives = 167/338 (49%), Gaps = 10/338 (2%)
Query: 97 MDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRR 156
+ + LI +GK +NK V S M + P + T L+ YG GG AE+ +
Sbjct: 181 VSYTALIQGFGKLKSYNKVTDVFSRMQRNRCPPDLKLCTVLISTYGNGGLPVLAESAMQY 240
Query: 157 MQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKK 216
Q+ G +P A+ Y ++ + + ++EAE+ +LD D + + ++ Y K
Sbjct: 241 AQAQGLQPDAIAYTALVHAYAQEGLWEEAEKTLSDMLDVGIV----DDRPYAALVAAYGK 296
Query: 217 AGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSK---IYDQMQRAGLQPDVVS 273
AG + K+ M GV+ ST YN+L++ + + K + MQ G Q D ++
Sbjct: 297 AGLTDNVNKILETMKASGVEASTTLYNTLINIHSKAEAPEKARAVLQLMQADGCQCDEIT 356
Query: 274 YALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMR 333
Y ++ AY + ++ A ++ EM AG++P +Y +L+ A+ +G + A + + M+
Sbjct: 357 YTSVMEAYSRNKQPLMAESMMGEMKRAGIQPGPVSYGVLISAYCRAGRLGDAERILRAMQ 416
Query: 334 RDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLE 393
+C P + Y M+S Y +A AE+ F+ ++ G P+ +T+ TLI Y K +
Sbjct: 417 NAKCKPTVEIYNMMISGYASAKMRSQAERMFQTMQDCGLRPDAVTFNTLISMYIKSRKRK 476
Query: 394 KMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAV 431
+ + Y +M+ G KPN + ++ AY D+++++
Sbjct: 477 QAEDCYIRMQQLGCKPNAVTYKILLKAY---TDYNNSI 511
Score = 128 bits (322), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 85/327 (25%), Positives = 150/327 (45%), Gaps = 7/327 (2%)
Query: 145 GRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQ 204
GR ++A IF+R + +G +P ++Y +++ F + + + +VF + + + P PD
Sbjct: 159 GRMRDAMTIFKRFEGAGLKPDVVSYTALIQGFGKLKSYNKVTDVF-SRMQRNRCP--PDL 215
Query: 205 KMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLM---SFETNYKEVSKIYDQ 261
K+ ++I Y G A +G+Q + Y +L+ + E ++E K
Sbjct: 216 KLCTVLISTYGNGGLPVLAESAMQYAQAQGLQPDAIAYTALVHAYAQEGLWEEAEKTLSD 275
Query: 262 MQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGM 321
M G+ D YA L+ AYGKA + + E M +GV + YN L++ + +
Sbjct: 276 MLDVGIVDDR-PYAALVAAYGKAGLTDNVNKILETMKASGVEASTTLYNTLINIHSKAEA 334
Query: 322 VDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGT 381
++AR V + M+ D C D +YT+++ AY AE +K+ G P ++YG
Sbjct: 335 PEKARAVLQLMQADGCQCDEITYTSVMEAYSRNKQPLMAESMMGEMKRAGIQPGPVSYGV 394
Query: 382 LIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCG 441
LI Y + L I M+ KP I+ ++ Y K A ++ M+ CG
Sbjct: 395 LISAYCRAGRLGDAERILRAMQNAKCKPTVEIYNMMISGYASAKMRSQAERMFQTMQDCG 454
Query: 442 FPPDQKAKNILLSLAKTADERNEANEL 468
PD N L+S+ + +R +A +
Sbjct: 455 LRPDAVTFNTLISMYIKSRKRKQAEDC 481
>gi|147780655|emb|CAN66818.1| hypothetical protein VITISV_004776 [Vitis vinifera]
Length = 1037
Score = 155 bits (392), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 102/391 (26%), Positives = 186/391 (47%), Gaps = 12/391 (3%)
Query: 101 MLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSS 160
+++ A+ K G ++A + M G P++V++ +L+ Y G + A+ + + M
Sbjct: 231 IMVNAFCKDGKVDEAAGFVKKMENLGVEPNIVTYHSLINGYVSLGDVEAAKGVLKFMSEK 290
Query: 161 GPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGY 220
G + +TY +++K + + K EAE+V + +E++ L PD++ + ++I Y + G
Sbjct: 291 GVSRNVVTYTLLIKGYCKQCKMDEAEKVLRGM--QEEAALVPDERAYGVLIDGYCRTGKI 348
Query: 221 EKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSK---IYDQMQRAGLQPDVVSYALL 277
+ A +L M G++ + NSL++ E+ + + +M L+PD SY L
Sbjct: 349 DDAVRLLDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEGVITRMVDWNLKPDSYSYNTL 408
Query: 278 INAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRC 337
++ Y + EA + ++ML G+ PT YN LL G D A ++ M +
Sbjct: 409 LDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKXGV 468
Query: 338 SPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMME 397
+PD Y+T+L + EGA ++ + GF + IT+ T+I G K+ + + E
Sbjct: 469 APDEVGYSTLLDGLFKMENFEGASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEAEE 528
Query: 398 IYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAK 457
I+DKM+ G P+ + T++D Y K + A ME P + N L+S
Sbjct: 529 IFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAMEREXISPSIEMYNSLISGLF 588
Query: 458 TADERNEANELLGNFNHPNNEPGINGLSISV 488
+ E +LL E GI GL+ ++
Sbjct: 589 KSRRLVEXTDLL-------TEMGIRGLTPNI 612
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 106/426 (24%), Positives = 189/426 (44%), Gaps = 49/426 (11%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKG-YAPSVVSHTALMEAYGRGGRYKNAEAI 153
N + + +LI Y KQ ++AEKVL M ++ P ++ L++ Y R G+ +A +
Sbjct: 295 NVVTYTLLIKGYCKQCKMDEAEKVLRGMQEEAALVPDERAYGVLIDGYCRTGKIDDAVRL 354
Query: 154 FRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYM 213
M G + + ++ + + + EAE V ++D LKPD ++ ++
Sbjct: 355 LDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEGVITRMVDWN---LKPDSYSYNTLLDG 411
Query: 214 YKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETN---YKEVSKIYDQMQRAGLQPD 270
Y + G +A L M + G++ + +TYN+L+ + + +I+ M + G+ PD
Sbjct: 412 YCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKXGVAPD 471
Query: 271 VVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFK 330
V Y+ L++ K E A +++++L G + +N ++ G + +A +F
Sbjct: 472 EVGYSTLLDGLFKMENFEGASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFD 531
Query: 331 CMRRDRCSPDICSYTTMLSAYVNASDMEGAEKF-------------------------FR 365
M+ CSPD +Y T++ Y AS++ A K R
Sbjct: 532 KMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAMEREXISPSIEMYNSLISGLFKSR 591
Query: 366 RLKQD----------GFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFT 415
RL + G PN++TYG LI G+ K L+K Y +M NG+ N I +
Sbjct: 592 RLVEXTDLLTEMGIRGLTPNIVTYGALIDGWCKEGMLDKAFSSYFEMTENGLSANIIICS 651
Query: 416 TIMDAYGKNKDFDSAVVWYKEMESCGFPPDQ----KAKNILLSLAKTADERNEANELLGN 471
T++ + D A + ++M GF PD K+ ++ K AD +E+ +
Sbjct: 652 TMVSGLYRLGRIDEANLLMQKMVDHGFFPDHECFLKSDIRYAAIQKIADSLDESCK---T 708
Query: 472 FNHPNN 477
F PNN
Sbjct: 709 FLLPNN 714
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 101/430 (23%), Positives = 177/430 (41%), Gaps = 74/430 (17%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
L+ + G F+ A ++ M K G AP V ++ L++ + ++ A +++ + + G
Sbjct: 443 LLKGLCRVGAFDDALQIWHLMMKXGVAPDEVGYSTLLDGLFKMENFEGASTLWKDILARG 502
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
S +T+ ++ + K EAEE+F + D SP D + +I Y KA
Sbjct: 503 FTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSP---DGITYRTLIDGYCKASNVG 559
Query: 222 KARKLFALMAERGVQQSTVTYNSLMS--FETN-YKEVSKIYDQMQRAGLQPDVVSYALLI 278
+A K+ M + S YNSL+S F++ E + + +M GL P++V+Y LI
Sbjct: 560 QAFKVKGAMEREXISPSIEMYNSLISGLFKSRRLVEXTDLLTEMGIRGLTPNIVTYGALI 619
Query: 279 NAYGK-----------------------------------ARREEEALAVFEEMLDAGVR 303
+ + K R +EA + ++M+D G
Sbjct: 620 DGWCKEGMLDKAFSSYFEMTENGLSANIIICSTMVSGLYRLGRIDEANLLMQKMVDHGFF 679
Query: 304 PTHKA--------------------------------YNILLDAFAISGMVDQARTVFKC 331
P H+ YNI + +G VD AR F
Sbjct: 680 PDHECFLKSDIRYAAIQKIADSLDESCKTFLLPNNIVYNIAIAGLCKTGKVDDARRFFSM 739
Query: 332 MRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNN 391
+ PD +Y T++ Y A +++ A + + + G VPN++TY LI G K N
Sbjct: 740 LSLKGFVPDNFTYCTLIHGYSAAGNVDEAFRLRDEMLRRGLVPNIVTYNALINGLCKSEN 799
Query: 392 LEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNI 451
+++ ++ K+ G+ PN + T++D Y K + D+A +M G P +
Sbjct: 800 VDRAQRLFHKLHQKGLFPNVVTYNTLIDGYCKIGNMDAAFKLKDKMIEEGISPSVVTYSA 859
Query: 452 LLS-LAKTAD 460
L++ L K D
Sbjct: 860 LINGLCKHGD 869
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 104/440 (23%), Positives = 183/440 (41%), Gaps = 45/440 (10%)
Query: 52 RTRGQPLPKDLVLGTLVRLKQLKKWNVVSEVLEWLRIQSWWDFNEMDFLM---LITAYGK 108
R P P +LV + RL L++ N +S+ ++F+ ++ A +
Sbjct: 33 RDESHPAPPELV-SRICRLVLLRRCNAISK---------------LNFVFSDDIVDAVLR 76
Query: 109 QGDFNKAEKV--LSFMNKK-GYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPS 165
N + F++K+ + P+V S+ L+ RG Y A ++
Sbjct: 77 NLRLNPTASLGFFQFVSKQQNFRPNVKSYCKLVHILSRGRMYDETRAYLNQL-------- 128
Query: 166 ALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARK 225
V+ KFK+ V L +F M++ +Y + G + A
Sbjct: 129 -----------VDLCKFKDRGNVIWDELVGVYREFAFSPTVFDMILKVYVEKGLTKNALY 177
Query: 226 LFALMAERGVQQSTVTYNSLMSFETNYKEVSK---IYDQMQRAGLQPDVVSYALLINAYG 282
+F M + G S + NSL++ E +Y QM R G+ PDV ++++NA+
Sbjct: 178 VFDNMGKCGRIPSLRSCNSLLNNLVKNGETHTAHYVYQQMIRVGIVPDVFMVSIMVNAFC 237
Query: 283 KARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDIC 342
K + +EA ++M + GV P Y+ L++ + G V+ A+ V K M S ++
Sbjct: 238 KDGKVDEAAGFVKKMENLGVEPNIVTYHSLINGYVSLGDVEAAKGVLKFMSEKGVSRNVV 297
Query: 343 SYTTMLSAYVNASDMEGAEKFFRRLKQD-GFVPNVITYGTLIKGYAKVNNLEKMMEIYDK 401
+YT ++ Y M+ AEK R ++++ VP+ YG LI GY + ++ + + D+
Sbjct: 298 TYTLLIKGYCKQCKMDEAEKVLRGMQEEAALVPDERAYGVLIDGYCRTGKIDDAVRLLDE 357
Query: 402 MRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADE 461
M G+K N I ++++ Y K + A M PD + N LL
Sbjct: 358 MLRLGLKTNLFICNSLINGYCKRGEIHEAEGVITRMVDWNLKPDSYSYNTLLDGYCREGH 417
Query: 462 RNEANELLGNFNHPNNEPGI 481
+EA L EP +
Sbjct: 418 TSEAFNLCDKMLQEGIEPTV 437
Score = 115 bits (287), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 98/458 (21%), Positives = 176/458 (38%), Gaps = 73/458 (15%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
LI Y K+G+ ++AE V++ M P S+ L++ Y R G A + +M G
Sbjct: 373 LINGYCKRGEIHEAEGVITRMVDWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEG 432
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
P+ LTY +LK F +A +++ ++ K + PD+ + ++ K +E
Sbjct: 433 IEPTVLTYNTLLKGLCRVGAFDDALQIWHLMM---KXGVAPDEVGYSTLLDGLFKMENFE 489
Query: 222 KARKLFALMAERGVQQSTVTYNSLMSFETNYK---EVSKIYDQMQRAGLQPDVVSYALLI 278
A L+ + RG +S +T+N+++S E +I+D+M+ G PD ++Y LI
Sbjct: 490 GASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLI 549
Query: 279 NAYGKA-----------------------------------RREEEALAVFEEMLDAGVR 303
+ Y KA RR E + EM G+
Sbjct: 550 DGYCKASNVGQAFKVKGAMEREXISPSIEMYNSLISGLFKSRRLVEXTDLLTEMGIRGLT 609
Query: 304 PTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKF 363
P Y L+D + GM+D+A + + M + S +I +TM+S ++ A
Sbjct: 610 PNIVTYGALIDGWCKEGMLDKAFSSYFEMTENGLSANIIICSTMVSGLYRLGRIDEANLL 669
Query: 364 FRRLKQDGF--------------------------------VPNVITYGTLIKGYAKVNN 391
+++ GF +PN I Y I G K
Sbjct: 670 MQKMVDHGFFPDHECFLKSDIRYAAIQKIADSLDESCKTFLLPNNIVYNIAIAGLCKTGK 729
Query: 392 LEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNI 451
++ + + + G P+ + T++ Y + D A EM G P+ N
Sbjct: 730 VDDARRFFSMLSLKGFVPDNFTYCTLIHGYSAAGNVDEAFRLRDEMLRRGLVPNIVTYNA 789
Query: 452 LLSLAKTADERNEANELLGNFNHPNNEPGINGLSISVD 489
L++ ++ + A L + P + + +D
Sbjct: 790 LINGLCKSENVDRAQRLFHKLHQKGLFPNVVTYNTLID 827
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 77/343 (22%), Positives = 155/343 (45%), Gaps = 9/343 (2%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
LI Y K + +A KV M ++ +PS+ + +L+ + R + M G
Sbjct: 548 LIDGYCKASNVGQAFKVKGAMEREXISPSIEMYNSLISGLFKSRRLVEXTDLLTEMGIRG 607
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
P+ +TY ++ + + +A F + + ++ L + + M+ + G +
Sbjct: 608 LTPNIVTYGALIDGWCKEGMLDKA---FSSYFEMTENGLSANIIICSTMVSGLYRLGRID 664
Query: 222 KARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSKIYDQMQRAG---LQPDVVSYALLI 278
+A L M + G + + + Y + KI D + + L P+ + Y + I
Sbjct: 665 EANLLMQKMVDHGFFPD---HECFLKSDIRYAAIQKIADSLDESCKTFLLPNNIVYNIAI 721
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCS 338
K + ++A F + G P + Y L+ ++ +G VD+A + M R
Sbjct: 722 AGLCKTGKVDDARRFFSMLSLKGFVPDNFTYCTLIHGYSAAGNVDEAFRLRDEMLRRGLV 781
Query: 339 PDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEI 398
P+I +Y +++ + +++ A++ F +L Q G PNV+TY TLI GY K+ N++ ++
Sbjct: 782 PNIVTYNALINGLCKSENVDRAQRLFHKLHQKGLFPNVVTYNTLIDGYCKIGNMDAAFKL 841
Query: 399 YDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCG 441
DKM GI P+ ++ +++ K+ D + ++ +M G
Sbjct: 842 KDKMIEEGISPSVVTYSALINGLCKHGDIERSMKLLNQMIKAG 884
Score = 108 bits (271), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 74/304 (24%), Positives = 148/304 (48%), Gaps = 9/304 (2%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + + LI + K+G +KA M + G + +++ + ++ R GR A +
Sbjct: 611 NIVTYGALIDGWCKEGMLDKAFSSYFEMTENGLSANIIICSTMVSGLYRLGRIDEANLLM 670
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
++M G P ++ LK + ++ +++ +L + K+ L P+ ++++ I
Sbjct: 671 QKMVDHGFFPD---HECFLKSDI---RYAAIQKIADSLDESCKTFLLPNNIVYNIAIAGL 724
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSLM---SFETNYKEVSKIYDQMQRAGLQPDV 271
K G + AR+ F++++ +G TY +L+ S N E ++ D+M R GL P++
Sbjct: 725 CKTGKVDDARRFFSMLSLKGFVPDNFTYCTLIHGYSAAGNVDEAFRLRDEMLRRGLVPNI 784
Query: 272 VSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKC 331
V+Y LIN K+ + A +F ++ G+ P YN L+D + G +D A +
Sbjct: 785 VTYNALINGLCKSENVDRAQRLFHKLHQKGLFPNVVTYNTLIDGYCKIGNMDAAFKLKDK 844
Query: 332 MRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNN 391
M + SP + +Y+ +++ D+E + K ++ + G +I Y TL++G K +N
Sbjct: 845 MIEEGISPSVVTYSALINGLCKHGDIERSMKLLNQMIKAGVDSKLIEYCTLVQGGFKTSN 904
Query: 392 LEKM 395
+M
Sbjct: 905 YNEM 908
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 74/334 (22%), Positives = 150/334 (44%), Gaps = 17/334 (5%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
LI+ K + +L+ M +G P++V++ AL++ + + G A + + M +G
Sbjct: 583 LISGLFKSRRLVEXTDLLTEMGIRGLTPNIVTYGALIDGWCKEGMLDKAFSSYFEMTENG 642
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY----KKA 217
+ + ++ + EA + ++D PD + F Y K A
Sbjct: 643 LSANIIICSTMVSGLYRLGRIDEANLLMQKMVDHG---FFPDHECFLKSDIRYAAIQKIA 699
Query: 218 GGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVS---KIYDQMQRAGLQPDVVSY 274
+++ K F L + + YN ++ +V + + + G PD +Y
Sbjct: 700 DSLDESCKTFLL-------PNNIVYNIAIAGLCKTGKVDDARRFFSMLSLKGFVPDNFTY 752
Query: 275 ALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRR 334
LI+ Y A +EA + +EML G+ P YN L++ S VD+A+ +F + +
Sbjct: 753 CTLIHGYSAAGNVDEAFRLRDEMLRRGLVPNIVTYNALINGLCKSENVDRAQRLFHKLHQ 812
Query: 335 DRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEK 394
P++ +Y T++ Y +M+ A K ++ ++G P+V+TY LI G K ++E+
Sbjct: 813 KGLFPNVVTYNTLIDGYCKIGNMDAAFKLKDKMIEEGISPSVVTYSALINGLCKHGDIER 872
Query: 395 MMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFD 428
M++ ++M G+ + T++ K +++
Sbjct: 873 SMKLLNQMIKAGVDSKLIEYCTLVQGGFKTSNYN 906
>gi|357485117|ref|XP_003612846.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355514181|gb|AES95804.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 892
Score = 155 bits (392), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 99/378 (26%), Positives = 189/378 (50%), Gaps = 7/378 (1%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + +LI + K+G +KA +V M G P V S++ L++ + R G +A +
Sbjct: 349 NIYSYSILIDGFCKEGRVDKALEVFEEMKNSGILPDVYSYSILIDGFCRKGDMDSAIKFW 408
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
M S+ PSA Y ++K + ++ +F A + F + +K + PD + ++ +Y
Sbjct: 409 EEMTSNNFSPSAFNYCSLIKGYYKSKQFANALKEFRIM---QKLGMWPDTIACNHILSIY 465
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSLM---SFETNYKEVSKIYDQMQRAGLQPDV 271
+ + KA L E GV + +YN + + ++ ++ M + + PDV
Sbjct: 466 CRKPDFNKALALSEKFQENGVHFNPYSYNEFIHRICRGSVPEKALQLLPVMLKRNVLPDV 525
Query: 272 VSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKC 331
V+Y+ LI+ + K E+A+ +F +M G+ K Y IL++ F +D A +FK
Sbjct: 526 VNYSTLISCFAKRLNSEKAVMLFIKMTKVGITFNVKTYTILINLFISDCKMDVAYRLFKG 585
Query: 332 MRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNN 391
M+ R PD +YT++++ + N +M A F + ++G PNV+TY I Y K+N
Sbjct: 586 MKESRVYPDQIAYTSLVAGFCNTGEMTRARALFDEMSREGCSPNVVTYTCFINEYLKLNK 645
Query: 392 LEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCG-FPPDQKAKN 450
+ ++Y+KM+ G+ P+Q ++T ++ A+ + + A + EM+ G P+
Sbjct: 646 NNQAHKLYEKMKERGVYPDQILYTMLIAAFCNTGEMNRAEALFDEMKQEGRCTPNVVMYT 705
Query: 451 ILLSLAKTADERNEANEL 468
L++ ++R++A +L
Sbjct: 706 CLINSYIKLNKRDQAEKL 723
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 85/340 (25%), Positives = 158/340 (46%), Gaps = 10/340 (2%)
Query: 99 FLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQ 158
F MLI + A V G +++S L++ R +F +
Sbjct: 139 FDMLIKVFASNSMLEHANYVFVRAKDDGIELNIMSCNFLLKCLVEDNRVDGVRLLFEVLI 198
Query: 159 SSGPRPSALTYQIILKLFVE----ANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
GPRP+ TY I++ F + + A E+ + ++P + + I
Sbjct: 199 KFGPRPNIHTYTIMMNFFCRGVGCSVDIRRASEILGKIYMSGETP---NVVTYGTYIKGL 255
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETN---YKEVSKIYDQMQRAGLQPDV 271
K G + A +L + + + +N+++ E S+++ +M+ +G+ PDV
Sbjct: 256 CKVGLFGVAWRLIQNLCRKNQPLNNHCFNAVIYGLCQGGILDEASEVFKEMKNSGILPDV 315
Query: 272 VSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKC 331
SY++LI+ + + R ++A VF+EM ++G+ P +Y+IL+D F G VD+A VF+
Sbjct: 316 YSYSILIDGFCRKGRVDQASEVFKEMRNSGILPNIYSYSILIDGFCKEGRVDKALEVFEE 375
Query: 332 MRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNN 391
M+ PD+ SY+ ++ + DM+ A KF+ + + F P+ Y +LIKGY K
Sbjct: 376 MKNSGILPDVYSYSILIDGFCRKGDMDSAIKFWEEMTSNNFSPSAFNYCSLIKGYYKSKQ 435
Query: 392 LEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAV 431
++ + M+ G+ P+ I+ Y + DF+ A+
Sbjct: 436 FANALKEFRIMQKLGMWPDTIACNHILSIYCRKPDFNKAL 475
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 106/476 (22%), Positives = 201/476 (42%), Gaps = 54/476 (11%)
Query: 41 VGSAVAVLRSERTRGQ-----PLPKDLVLGTLVRLKQLKKWNVVSEVLEWLRIQSWW--- 92
VG +V + R+ G+ P + GT + K L K + + W IQ+
Sbjct: 220 VGCSVDIRRASEILGKIYMSGETPNVVTYGTYI--KGLCKVGLFG--VAWRLIQNLCRKN 275
Query: 93 -DFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAE 151
N F +I + G ++A +V M G P V S++ L++ + R GR A
Sbjct: 276 QPLNNHCFNAVIYGLCQGGILDEASEVFKEMKNSGILPDVYSYSILIDGFCRKGRVDQAS 335
Query: 152 AIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMI 211
+F+ M++SG P+ +Y I++ F + + +A EVF + + S + PD + ++I
Sbjct: 336 EVFKEMRNSGILPNIYSYSILIDGFCKEGRVDKALEVFEEM---KNSGILPDVYSYSILI 392
Query: 212 YMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVS---KIYDQMQRAGLQ 268
+ + G + A K + M S Y SL+ K+ + K + MQ+ G+
Sbjct: 393 DGFCRKGDMDSAIKFWEEMTSNNFSPSAFNYCSLIKGYYKSKQFANALKEFRIMQKLGMW 452
Query: 269 PDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTV 328
PD ++ +++ Y + +ALA+ E+ + GV +YN + + ++A +
Sbjct: 453 PDTIACNHILSIYCRKPDFNKALALSEKFQENGVHFNPYSYNEFIHRICRGSVPEKALQL 512
Query: 329 FKCMRRDRCSPDICSYTTMLSA-----------------------------------YVN 353
M + PD+ +Y+T++S +++
Sbjct: 513 LPVMLKRNVLPDVVNYSTLISCFAKRLNSEKAVMLFIKMTKVGITFNVKTYTILINLFIS 572
Query: 354 ASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTI 413
M+ A + F+ +K+ P+ I Y +L+ G+ + + ++D+M G PN
Sbjct: 573 DCKMDVAYRLFKGMKESRVYPDQIAYTSLVAGFCNTGEMTRARALFDEMSREGCSPNVVT 632
Query: 414 FTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELL 469
+T ++ Y K + A Y++M+ G PDQ +L++ E N A L
Sbjct: 633 YTCFINEYLKLNKNNQAHKLYEKMKERGVYPDQILYTMLIAAFCNTGEMNRAEALF 688
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 85/374 (22%), Positives = 172/374 (45%), Gaps = 45/374 (12%)
Query: 124 KKGYAPSVVSHTALMEAYGRGGR----YKNAEAIFRRMQSSGPRPSALTYQIILKLFVEA 179
K G P++ ++T +M + RG + A I ++ SG P+ +TY +K +
Sbjct: 199 KFGPRPNIHTYTIMMNFFCRGVGCSVDIRRASEILGKIYMSGETPNVVTYGTYIKGLCKV 258
Query: 180 NKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQST 239
F A + L + + PL + F+ +IY + G ++A ++F M G+
Sbjct: 259 GLFGVAWRLIQNLCRKNQ-PL--NNHCFNAVIYGLCQGGILDEASEVFKEMKNSGILPDV 315
Query: 240 VTYNSLM---SFETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEE 296
+Y+ L+ + + S+++ +M+ +G+ P++ SY++LI+ + K R ++AL VFEE
Sbjct: 316 YSYSILIDGFCRKGRVDQASEVFKEMRNSGILPNIYSYSILIDGFCKEGRVDKALEVFEE 375
Query: 297 MLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASD 356
M ++G+ P +Y+IL+D F G +D A ++ M + SP +Y +++ Y +
Sbjct: 376 MKNSGILPDVYSYSILIDGFCRKGDMDSAIKFWEEMTSNNFSPSAFNYCSLIKGYYKSKQ 435
Query: 357 MEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIK-------- 408
A K FR +++ G P+ I ++ Y + + K + + +K + NG+
Sbjct: 436 FANALKEFRIMQKLGMWPDTIACNHILSIYCRKPDFNKALALSEKFQENGVHFNPYSYNE 495
Query: 409 ---------------------------PNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCG 441
P+ ++T++ + K + + AV+ + +M G
Sbjct: 496 FIHRICRGSVPEKALQLLPVMLKRNVLPDVVNYSTLISCFAKRLNSEKAVMLFIKMTKVG 555
Query: 442 FPPDQKAKNILLSL 455
+ K IL++L
Sbjct: 556 ITFNVKTYTILINL 569
Score = 115 bits (287), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 80/343 (23%), Positives = 161/343 (46%), Gaps = 10/343 (2%)
Query: 137 LMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEE 196
L++ + ++A +F R + G + ++ +LK VE N+ +F L+
Sbjct: 142 LIKVFASNSMLEHANYVFVRAKDDGIELNIMSCNFLLKCLVEDNRVDGVRLLFEVLI--- 198
Query: 197 KSPLKPDQKMFHMMIYMYKKAGG----YEKARKLFALMAERGVQQSTVTYNSLMSFETN- 251
K +P+ + +M+ + + G +A ++ + G + VTY + +
Sbjct: 199 KFGPRPNIHTYTIMMNFFCRGVGCSVDIRRASEILGKIYMSGETPNVVTYGTYIKGLCKV 258
Query: 252 --YKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAY 309
+ ++ + R + + +I + +EA VF+EM ++G+ P +Y
Sbjct: 259 GLFGVAWRLIQNLCRKNQPLNNHCFNAVIYGLCQGGILDEASEVFKEMKNSGILPDVYSY 318
Query: 310 NILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQ 369
+IL+D F G VDQA VFK MR P+I SY+ ++ + ++ A + F +K
Sbjct: 319 SILIDGFCRKGRVDQASEVFKEMRNSGILPNIYSYSILIDGFCKEGRVDKALEVFEEMKN 378
Query: 370 DGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDS 429
G +P+V +Y LI G+ + +++ ++ +++M N P+ + +++ Y K+K F +
Sbjct: 379 SGILPDVYSYSILIDGFCRKGDMDSAIKFWEEMTSNNFSPSAFNYCSLIKGYYKSKQFAN 438
Query: 430 AVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNF 472
A+ ++ M+ G PD A N +LS+ + N+A L F
Sbjct: 439 ALKEFRIMQKLGMWPDTIACNHILSIYCRKPDFNKALALSEKF 481
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 63/288 (21%), Positives = 142/288 (49%), Gaps = 10/288 (3%)
Query: 165 SALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKAR 224
S + + +++K+F + + A VF+ D+ ++ + + ++ + + R
Sbjct: 135 SNVVFDMLIKVFASNSMLEHANYVFVRAKDDG---IELNIMSCNFLLKCLVEDNRVDGVR 191
Query: 225 KLFALMAERGVQQSTVTYNSLMSF-------ETNYKEVSKIYDQMQRAGLQPDVVSYALL 277
LF ++ + G + + TY +M+F + + S+I ++ +G P+VV+Y
Sbjct: 192 LLFEVLIKFGPRPNIHTYTIMMNFFCRGVGCSVDIRRASEILGKIYMSGETPNVVTYGTY 251
Query: 278 INAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRC 337
I K A + + + + +N ++ G++D+A VFK M+
Sbjct: 252 IKGLCKVGLFGVAWRLIQNLCRKNQPLNNHCFNAVIYGLCQGGILDEASEVFKEMKNSGI 311
Query: 338 SPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMME 397
PD+ SY+ ++ + ++ A + F+ ++ G +PN+ +Y LI G+ K ++K +E
Sbjct: 312 LPDVYSYSILIDGFCRKGRVDQASEVFKEMRNSGILPNIYSYSILIDGFCKEGRVDKALE 371
Query: 398 IYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPD 445
++++M+ +GI P+ ++ ++D + + D DSA+ +++EM S F P
Sbjct: 372 VFEEMKNSGILPDVYSYSILIDGFCRKGDMDSAIKFWEEMTSNNFSPS 419
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/293 (22%), Positives = 141/293 (48%), Gaps = 22/293 (7%)
Query: 172 ILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMA 231
I+ + E N+ +A E+ LLD EKS + +F M+I ++ E A +F
Sbjct: 111 IVTFYKEENR--DAGELVSLLLDVEKSNV-----VFDMLIKVFASNSMLEHANYVFVRAK 163
Query: 232 ERGVQQSTVTYNSLMSF---ETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKA---- 284
+ G++ + ++ N L+ + V +++ + + G +P++ +Y +++N + +
Sbjct: 164 DDGIELNIMSCNFLLKCLVEDNRVDGVRLLFEVLIKFGPRPNIHTYTIMMNFFCRGVGCS 223
Query: 285 ---RREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQA-RTVFKCMRRDRCSPD 340
RR E L ++ +G P Y + G+ A R + R+++ +
Sbjct: 224 VDIRRASEILG---KIYMSGETPNVVTYGTYIKGLCKVGLFGVAWRLIQNLCRKNQPLNN 280
Query: 341 ICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYD 400
C + ++ ++ A + F+ +K G +P+V +Y LI G+ + +++ E++
Sbjct: 281 HC-FNAVIYGLCQGGILDEASEVFKEMKNSGILPDVYSYSILIDGFCRKGRVDQASEVFK 339
Query: 401 KMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILL 453
+MR +GI PN ++ ++D + K D A+ ++EM++ G PD + +IL+
Sbjct: 340 EMRNSGILPNIYSYSILIDGFCKEGRVDKALEVFEEMKNSGILPDVYSYSILI 392
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 68/283 (24%), Positives = 117/283 (41%), Gaps = 45/283 (15%)
Query: 250 TNYKEVSKIYDQMQRAGLQPDV----VSYALLINAYGKARREEEALAVFEEMLDAGVRPT 305
T YKE ++ D + L DV V + +LI + E A VF D G+
Sbjct: 113 TFYKEENR--DAGELVSLLLDVEKSNVVFDMLIKVFASNSMLEHANYVFVRAKDDGIELN 170
Query: 306 HKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVN----ASDMEGAE 361
+ N LL VD R +F+ + + P+I +YT M++ + + D+ A
Sbjct: 171 IMSCNFLLKCLVEDNRVDGVRLLFEVLIKFGPRPNIHTYTIMMNFFCRGVGCSVDIRRAS 230
Query: 362 KFFRRLKQDGFVPNVITYGTLIKGYAKV--------------------NN---------- 391
+ ++ G PNV+TYGT IKG KV NN
Sbjct: 231 EILGKIYMSGETPNVVTYGTYIKGLCKVGLFGVAWRLIQNLCRKNQPLNNHCFNAVIYGL 290
Query: 392 -----LEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQ 446
L++ E++ +M+ +GI P+ ++ ++D + + D A +KEM + G P+
Sbjct: 291 CQGGILDEASEVFKEMKNSGILPDVYSYSILIDGFCRKGRVDQASEVFKEMRNSGILPNI 350
Query: 447 KAKNILLSLAKTADERNEANELLGNFNHPNNEPGINGLSISVD 489
+ +IL+ ++A E+ + P + SI +D
Sbjct: 351 YSYSILIDGFCKEGRVDKALEVFEEMKNSGILPDVYSYSILID 393
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/210 (22%), Positives = 91/210 (43%), Gaps = 36/210 (17%)
Query: 94 FNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAI 153
FN + +LI + + A ++ M + P +++T+L+ + G A A+
Sbjct: 558 FNVKTYTILINLFISDCKMDVAYRLFKGMKESRVYPDQIAYTSLVAGFCNTGEMTRARAL 617
Query: 154 FRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYM 213
F M G P+ +TY + +++ NK +A +++ + ++ + PDQ ++ M+I
Sbjct: 618 FDEMSREGCSPNVVTYTCFINEYLKLNKNNQAHKLYEKM---KERGVYPDQILYTMLIAA 674
Query: 214 YKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSKIYDQMQRAG-LQPDVV 272
+ G +A LF D+M++ G P+VV
Sbjct: 675 FCNTGEMNRAEALF--------------------------------DEMKQEGRCTPNVV 702
Query: 273 SYALLINAYGKARREEEALAVFEEMLDAGV 302
Y LIN+Y K + ++A ++EEM G+
Sbjct: 703 MYTCLINSYIKLNKRDQAEKLYEEMRAKGL 732
>gi|363543233|ref|NP_001241831.1| uncharacterized protein LOC100857030 [Zea mays]
gi|224033903|gb|ACN36027.1| unknown [Zea mays]
Length = 655
Score = 155 bits (392), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 112/470 (23%), Positives = 219/470 (46%), Gaps = 21/470 (4%)
Query: 13 RRKVEVFKD-----AADEAGKKNWRRLMNQIEEVGS---AVAVLRSERTRGQPLPKDLVL 64
R V V +D A + G N ++N I + GS A+ +LR + G D+V
Sbjct: 174 RSAVRVLEDLHARGCALDVGNCNL--VLNAICDQGSVDEALHLLRDLPSFG--CEPDVVS 229
Query: 65 --GTLVRLKQLKKWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFM 122
L L K+W V E++E + ++ N + F LI+ + G F + +VL+ M
Sbjct: 230 YNAVLKGLCMAKRWGCVQELMEEM-VRMACPPNIVTFNTLISYLCRNGLFERVHEVLAQM 288
Query: 123 NKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKF 182
+ G P + + +++ + G + A I RM S G +P+ + Y +LK A ++
Sbjct: 289 VEHGCTPDIRMYATIIDGICKEGHLEVAHEILNRMPSYGLKPNVVCYNTLLKGLCSAERW 348
Query: 183 KEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTY 242
+E EE+ + D++ PL D F++++ + + G ++ +L M ERG +TY
Sbjct: 349 EETEELLAEMFDKD-CPL--DDVTFNILVDFFCQNGLVDRVIELLEQMLERGCMPDVITY 405
Query: 243 NSLMSF---ETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLD 299
++++ E E + M G +P+ +SY +++ A R +A + +M+
Sbjct: 406 TTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIVLKGLCSAERWVDAEDLMSQMIQ 465
Query: 300 AGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEG 359
G +N L++ G+V+QA + K M + CSPD+ SY+T++ A +
Sbjct: 466 QGCPLNPITFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTDE 525
Query: 360 AEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMD 419
A + + G PN I Y ++ ++ + K+++++D ++ I+ + ++ ++
Sbjct: 526 ALELLNVMVNKGMSPNTIIYSSIASALSREGRINKVIQMFDNIQDTTIRSDAVLYNAVIS 585
Query: 420 AYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELL 469
+ K + + A+ + M S G P++ IL+ + EA E+L
Sbjct: 586 SLCKRGETERAIEFLAYMVSSGCVPNESTYTILIRGLASEGFVKEAQEML 635
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 88/377 (23%), Positives = 171/377 (45%), Gaps = 9/377 (2%)
Query: 101 MLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSS 160
+++ A QG ++A +L + G P VVS+ A+++ R+ + + M
Sbjct: 197 LVLNAICDQGSVDEALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRM 256
Query: 161 GPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGY 220
P+ +T+ ++ F+ EV +++ +P D +M+ +I K G
Sbjct: 257 ACPPNIVTFNTLISYLCRNGLFERVHEVLAQMVEHGCTP---DIRMYATIIDGICKEGHL 313
Query: 221 EKARKLFALMAERGVQQSTVTYNSLM---SFETNYKEVSKIYDQMQRAGLQPDVVSYALL 277
E A ++ M G++ + V YN+L+ ++E ++ +M D V++ +L
Sbjct: 314 EVAHEILNRMPSYGLKPNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNIL 373
Query: 278 INAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRC 337
++ + + + + + E+ML+ G P Y +++ F G++D+A + K M C
Sbjct: 374 VDFFCQNGLVDRVIELLEQMLERGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGC 433
Query: 338 SPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMME 397
P+ SYT +L +A AE ++ Q G N IT+ TLI K +E+ +E
Sbjct: 434 KPNTISYTIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQAIE 493
Query: 398 IYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAK 457
+ +M VNG P+ ++T++D GK D A+ M + G P+ I S+A
Sbjct: 494 LLKQMLVNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTI---IYSSIAS 550
Query: 458 TADERNEANELLGNFNH 474
N+++ F++
Sbjct: 551 ALSREGRINKVIQMFDN 567
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 89/372 (23%), Positives = 167/372 (44%), Gaps = 6/372 (1%)
Query: 101 MLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSS 160
+++ A + G F A +VL ++ +G A V + ++ A G A + R + S
Sbjct: 162 VILEAACRGGGFRSAVRVLEDLHARGCALDVGNCNLVLNAICDQGSVDEALHLLRDLPSF 221
Query: 161 GPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGY 220
G P ++Y +LK A ++ +E+ ++ + P+ F+ +I + G +
Sbjct: 222 GCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMV---RMACPPNIVTFNTLISYLCRNGLF 278
Query: 221 EKARKLFALMAERGVQQSTVTYNSLM---SFETNYKEVSKIYDQMQRAGLQPDVVSYALL 277
E+ ++ A M E G Y +++ E + + +I ++M GL+P+VV Y L
Sbjct: 279 ERVHEVLAQMVEHGCTPDIRMYATIIDGICKEGHLEVAHEILNRMPSYGLKPNVVCYNTL 338
Query: 278 INAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRC 337
+ A R EE + EM D +NIL+D F +G+VD+ + + M C
Sbjct: 339 LKGLCSAERWEETEELLAEMFDKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLERGC 398
Query: 338 SPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMME 397
PD+ +YTT+++ + ++ A + + G PN I+Y ++KG +
Sbjct: 399 MPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIVLKGLCSAERWVDAED 458
Query: 398 IYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAK 457
+ +M G N F T+++ K + A+ K+M G PD + + ++
Sbjct: 459 LMSQMIQQGCPLNPITFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLG 518
Query: 458 TADERNEANELL 469
A + +EA ELL
Sbjct: 519 KAGKTDEALELL 530
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 75/352 (21%), Positives = 160/352 (45%), Gaps = 43/352 (12%)
Query: 59 PKDLVLGTLVR-LKQLKKWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEK 117
P + TL++ L ++W E+L + +++ F +L+ + + G ++ +
Sbjct: 330 PNVVCYNTLLKGLCSAERWEETEELLAEM-FDKDCPLDDVTFNILVDFFCQNGLVDRVIE 388
Query: 118 VLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFV 177
+L M ++G P V+++T ++ + + G A + + M + G +P+ ++Y I+LK
Sbjct: 389 LLEQMLERGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIVLKGLC 448
Query: 178 EANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQ 237
A ++ +AE+ M+ + ++ PL P
Sbjct: 449 SAERWVDAED-LMSQMIQQGCPLNP----------------------------------- 472
Query: 238 STVTYNSLMSFETN---YKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVF 294
+T+N+L++F ++ ++ QM G PD++SY+ +I+ GKA + +EAL +
Sbjct: 473 --ITFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTDEALELL 530
Query: 295 EEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNA 354
M++ G+ P Y+ + A + G +++ +F ++ D Y ++S+
Sbjct: 531 NVMVNKGMSPNTIIYSSIASALSREGRINKVIQMFDNIQDTTIRSDAVLYNAVISSLCKR 590
Query: 355 SDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNG 406
+ E A +F + G VPN TY LI+G A +++ E+ ++ G
Sbjct: 591 GETERAIEFLAYMVSSGCVPNESTYTILIRGLASEGFVKEAQEMLTELCSKG 642
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/267 (24%), Positives = 114/267 (42%), Gaps = 6/267 (2%)
Query: 207 FHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSL---MSFETNYKEVSKIYDQMQ 263
++ M+ Y +AG E AR+L A + V + TY + + + + D+M
Sbjct: 93 YNAMVAGYCRAGQLESARRLAAAVP---VPPNAYTYFPVVRALCARGRIADALAVLDEMP 149
Query: 264 RAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVD 323
R G P Y +++ A + A+ V E++ G N++L+A G VD
Sbjct: 150 RRGCAPIPPMYHVILEAACRGGGFRSAVRVLEDLHARGCALDVGNCNLVLNAICDQGSVD 209
Query: 324 QARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLI 383
+A + + + C PD+ SY +L A ++ + + PN++T+ TLI
Sbjct: 210 EALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTLI 269
Query: 384 KGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFP 443
+ E++ E+ +M +G P+ ++ TI+D K + A M S G
Sbjct: 270 SYLCRNGLFERVHEVLAQMVEHGCTPDIRMYATIIDGICKEGHLEVAHEILNRMPSYGLK 329
Query: 444 PDQKAKNILLSLAKTADERNEANELLG 470
P+ N LL +A+ E ELL
Sbjct: 330 PNVVCYNTLLKGLCSAERWEETEELLA 356
Score = 45.1 bits (105), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 34/139 (24%), Positives = 59/139 (42%), Gaps = 5/139 (3%)
Query: 344 YTTMLSAYVNASDMEGAEKFFRRLKQDGFVP-NVITYGTLIKGYAKVNNLEKMMEIYDKM 402
Y M++ Y A +E A RRL VP N TY +++ + + + D+M
Sbjct: 93 YNAMVAGYCRAGQLESA----RRLAAAVPVPPNAYTYFPVVRALCARGRIADALAVLDEM 148
Query: 403 RVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADER 462
G P ++ I++A + F SAV +++ + G D N++L+
Sbjct: 149 PRRGCAPIPPMYHVILEAACRGGGFRSAVRVLEDLHARGCALDVGNCNLVLNAICDQGSV 208
Query: 463 NEANELLGNFNHPNNEPGI 481
+EA LL + EP +
Sbjct: 209 DEALHLLRDLPSFGCEPDV 227
>gi|357166784|ref|XP_003580849.1| PREDICTED: pentatricopeptide repeat-containing protein At5g04810,
chloroplastic-like [Brachypodium distachyon]
Length = 904
Score = 155 bits (392), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 99/395 (25%), Positives = 184/395 (46%), Gaps = 43/395 (10%)
Query: 98 DFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRM 157
+F ++I Y K+GD + A M +G P+ T+L+ AY + + M
Sbjct: 271 EFGLMIVYYAKRGDKHHARATFENMRARGIEPNAFVFTSLVHAYAVARDMRGVLSCVEEM 330
Query: 158 QSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKP-DQKMFHMMIYMYKK 216
++ G + +TY II+ F + N + A+ +F E K+ L + ++ +I+ + +
Sbjct: 331 KAEGIELTIVTYSIIIAGFAKINDAQSADNLF----KEAKAKLGDLNGIIYSNIIHAHCQ 386
Query: 217 AGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSK---IYDQMQRAGLQPDVVS 273
+G ++A +L M E G+ Y+S+M T ++ K ++++++ P ++S
Sbjct: 387 SGNMDRAEELVREMEEDGIDAPIDAYHSMMHGYTIIQDEKKCLIVFERLKECCFTPSIIS 446
Query: 274 YALLINAYGKARREEEALAV-----------------------------------FEEML 298
Y LIN Y K + +A+A+ FEEML
Sbjct: 447 YGCLINLYIKIGKVTKAIAISKEMESYGIKHNNKTYSMLISGFIHLHDFANAFSIFEEML 506
Query: 299 DAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDME 358
+G++P YN+L++AF G +D+A + + M+++R P ++ ++ + A DM+
Sbjct: 507 KSGLQPDRAIYNLLIEAFCKMGNMDRAIRILEKMQKERMQPSNRAFRPIIEGFAVAGDMK 566
Query: 359 GAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIM 418
A +++ G P V+TY LI G K N +E+ + + +KM + GI PN+ +T IM
Sbjct: 567 RALNILDLMRRSGCAPTVMTYNALIHGLIKKNQVERAVSVLNKMSIAGITPNEHTYTIIM 626
Query: 419 DAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILL 453
Y N D A ++ +++ G D LL
Sbjct: 627 RGYAANGDIGKAFEYFTKIKEGGLKLDVYIYETLL 661
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 93/391 (23%), Positives = 183/391 (46%), Gaps = 41/391 (10%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
++ Y D K V + + + PS++S+ L+ Y + G+ A AI + M+S G
Sbjct: 415 MMHGYTIIQDEKKCLIVFERLKECCFTPSIISYGCLINLYIKIGKVTKAIAISKEMESYG 474
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
+ + TY +++ F+ + F A +F +L KS L+PD+ +++++I + K G +
Sbjct: 475 IKHNNKTYSMLISGFIHLHDFANAFSIFEEML---KSGLQPDRAIYNLLIEAFCKMGNMD 531
Query: 222 KARKLFALMAERGVQQSTVTYNSLM---SFETNYKEVSKIYDQMQRAGLQPDVVSYALLI 278
+A ++ M + +Q S + ++ + + K I D M+R+G P V++Y LI
Sbjct: 532 RAIRILEKMQKERMQPSNRAFRPIIEGFAVAGDMKRALNILDLMRRSGCAPTVMTYNALI 591
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCS 338
+ K + E A++V +M AG+ P Y I++ +A +G + +A F ++
Sbjct: 592 HGLIKKNQVERAVSVLNKMSIAGITPNEHTYTIIMRGYAANGDIGKAFEYFTKIKEGGLK 651
Query: 339 PDICSYTTMLSAYVNASDMEG-----------------------------------AEKF 363
D+ Y T+L A + M+ A
Sbjct: 652 LDVYIYETLLRACCKSGRMQSALAVTREMSTQKIARNTFVYNILIDGWARRGDVWEAADL 711
Query: 364 FRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGK 423
+++K+DG PN+ TY + I K ++++ ++ ++M G+KPN +TT++ + K
Sbjct: 712 MKQMKEDGVPPNIHTYTSYINACCKAGDMQRAQKVIEEMADVGLKPNLKTYTTLIKGWAK 771
Query: 424 NKDFDSAVVWYKEMESCGFPPDQKAKNILLS 454
D A+ ++EM+ G PD+ A + L++
Sbjct: 772 ASLPDRALKSFEEMKLAGLKPDEAAYHCLVT 802
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 100/370 (27%), Positives = 181/370 (48%), Gaps = 16/370 (4%)
Query: 59 PKDLVLGTLV----RLKQLKKWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNK 114
P + G L+ ++ ++ K +S+ +E I+ N + MLI+ + DF
Sbjct: 442 PSIISYGCLINLYIKIGKVTKAIAISKEMESYGIKH----NNKTYSMLISGFIHLHDFAN 497
Query: 115 AEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILK 174
A + M K G P + L+EA+ + G A I +MQ +PS ++ I++
Sbjct: 498 AFSIFEEMLKSGLQPDRAIYNLLIEAFCKMGNMDRAIRILEKMQKERMQPSNRAFRPIIE 557
Query: 175 LFVEANKFKEAEEVFMTLLD-EEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAER 233
F A K A + +LD +S P ++ +I+ K E+A + M+
Sbjct: 558 GFAVAGDMKRA----LNILDLMRRSGCAPTVMTYNALIHGLIKKNQVERAVSVLNKMSIA 613
Query: 234 GVQQSTVTYNSLMSFETNYKEVSKIYD---QMQRAGLQPDVVSYALLINAYGKARREEEA 290
G+ + TY +M ++ K ++ +++ GL+ DV Y L+ A K+ R + A
Sbjct: 614 GITPNEHTYTIIMRGYAANGDIGKAFEYFTKIKEGGLKLDVYIYETLLRACCKSGRMQSA 673
Query: 291 LAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSA 350
LAV EM + YNIL+D +A G V +A + K M+ D P+I +YT+ ++A
Sbjct: 674 LAVTREMSTQKIARNTFVYNILIDGWARRGDVWEAADLMKQMKEDGVPPNIHTYTSYINA 733
Query: 351 YVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPN 410
A DM+ A+K + G PN+ TY TLIKG+AK + ++ ++ +++M++ G+KP+
Sbjct: 734 CCKAGDMQRAQKVIEEMADVGLKPNLKTYTTLIKGWAKASLPDRALKSFEEMKLAGLKPD 793
Query: 411 QTIFTTIMDA 420
+ + ++ +
Sbjct: 794 EAAYHCLVTS 803
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 79/304 (25%), Positives = 141/304 (46%), Gaps = 11/304 (3%)
Query: 196 EKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLM---SFETNY 252
E+ P KP ++ F +MI Y K G AR F M RG++ + + SL+ + +
Sbjct: 262 ERIP-KPSRREFGLMIVYYAKRGDKHHARATFENMRARGIEPNAFVFTSLVHAYAVARDM 320
Query: 253 KEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNIL 312
+ V ++M+ G++ +V+Y+++I + K + A +F+E Y+ +
Sbjct: 321 RGVLSCVEEMKAEGIELTIVTYSIIIAGFAKINDAQSADNLFKEAKAKLGDLNGIIYSNI 380
Query: 313 LDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGF 372
+ A SG +D+A + + M D I +Y +M+ Y D + F RLK+ F
Sbjct: 381 IHAHCQSGNMDRAEELVREMEEDGIDAPIDAYHSMMHGYTIIQDEKKCLIVFERLKECCF 440
Query: 373 VPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVV 432
P++I+YG LI Y K+ + K + I +M GIK N ++ ++ + DF +A
Sbjct: 441 TPSIISYGCLINLYIKIGKVTKAIAISKEMESYGIKHNNKTYSMLISGFIHLHDFANAFS 500
Query: 433 WYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFN----HPNN---EPGINGLS 485
++EM G PD+ N+L+ + A +L P+N P I G +
Sbjct: 501 IFEEMLKSGLQPDRAIYNLLIEAFCKMGNMDRAIRILEKMQKERMQPSNRAFRPIIEGFA 560
Query: 486 ISVD 489
++ D
Sbjct: 561 VAGD 564
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 69/266 (25%), Positives = 135/266 (50%), Gaps = 7/266 (2%)
Query: 99 FLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQ 158
F +I + GD +A +L M + G AP+V+++ AL+ + + + A ++ +M
Sbjct: 552 FRPIIEGFAVAGDMKRALNILDLMRRSGCAPTVMTYNALIHGLIKKNQVERAVSVLNKMS 611
Query: 159 SSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAG 218
+G P+ TY II++ + +A E F + ++ LK D ++ ++ K+G
Sbjct: 612 IAGITPNEHTYTIIMRGYAANGDIGKAFEYFTKI---KEGGLKLDVYIYETLLRACCKSG 668
Query: 219 GYEKARKLFALMAERGVQQSTVTYNSLM---SFETNYKEVSKIYDQMQRAGLQPDVVSYA 275
+ A + M+ + + ++T YN L+ + + E + + QM+ G+ P++ +Y
Sbjct: 669 RMQSALAVTREMSTQKIARNTFVYNILIDGWARRGDVWEAADLMKQMKEDGVPPNIHTYT 728
Query: 276 LLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRD 335
INA KA + A V EEM D G++P K Y L+ +A + + D+A F+ M+
Sbjct: 729 SYINACCKAGDMQRAQKVIEEMADVGLKPNLKTYTTLIKGWAKASLPDRALKSFEEMKLA 788
Query: 336 RCSPDICSYTTMLSAYVN-ASDMEGA 360
PD +Y ++++ ++ A+ MEG+
Sbjct: 789 GLKPDEAAYHCLVTSLLSRATVMEGS 814
>gi|302756343|ref|XP_002961595.1| hypothetical protein SELMODRAFT_76510 [Selaginella moellendorffii]
gi|300170254|gb|EFJ36855.1| hypothetical protein SELMODRAFT_76510 [Selaginella moellendorffii]
Length = 603
Score = 155 bits (392), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 95/384 (24%), Positives = 174/384 (45%), Gaps = 6/384 (1%)
Query: 101 MLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSS 160
+LI K G N A + + G PS V++T+L+ + +A +F M
Sbjct: 15 ILIDGLAKAGKLNDARDLFQKLLHSGVTPSTVAYTSLIHGLCMANSFDDARELFADMNRR 74
Query: 161 GPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGY 220
G PS +TY +I+ + +EA ++ ++++ P D ++ ++ K+G
Sbjct: 75 GCPPSPVTYNVIIDASCKRGMLEEACDLIKKMIEDGHVP---DVVTYNTVMDGLCKSGRV 131
Query: 221 EKARKLFALMAERGVQQSTVTYNSL---MSFETNYKEVSKIYDQMQRAGLQPDVVSYALL 277
E+A LF M G + ++N++ + ++ + +++ +M+ + PD SY +L
Sbjct: 132 EEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEARDIPPDSWSYGIL 191
Query: 278 INAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRC 337
I+ KA + EA +F MLD+G+ P+ YN+++ ++ +D+A +FK MR C
Sbjct: 192 IDGLAKAGKLNEAYKLFRRMLDSGITPSAVTYNVVIHGMCLAYTLDEALELFKSMRSKGC 251
Query: 338 SPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMME 397
P ++ ++ A+ M+ A + +R+ DG VP+V+TY TLI G + ++
Sbjct: 252 RPSRFTFNILIDAHCKRGKMDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARH 311
Query: 398 IYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAK 457
+ + M KP T++ K A M S G PD N L+
Sbjct: 312 LLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHC 371
Query: 458 TADERNEANELLGNFNHPNNEPGI 481
A + A ELL + P +
Sbjct: 372 RAGQTERARELLSDMVARGLAPNV 395
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 99/407 (24%), Positives = 174/407 (42%), Gaps = 41/407 (10%)
Query: 101 MLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSS 160
++I A K+G +A ++ M + G+ P VV++ +M+ + GR + A +F M+
Sbjct: 85 VIIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGLCKSGRVEEALLLFNEMERL 144
Query: 161 GPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGY 220
G P+ ++ I+ + +K +A +VF + E + PD + ++I KAG
Sbjct: 145 GCTPNRRSHNTIILGLCQQSKIDQACQVFHEM---EARDIPPDSWSYGILIDGLAKAGKL 201
Query: 221 EKARKLFALMAERGVQQSTVTYNSL---MSFETNYKEVSKIYDQMQRAGLQP-------- 269
+A KLF M + G+ S VTYN + M E +++ M+ G +P
Sbjct: 202 NEAYKLFRRMLDSGITPSAVTYNVVIHGMCLAYTLDEALELFKSMRSKGCRPSRFTFNIL 261
Query: 270 ---------------------------DVVSYALLINAYGKARREEEALAVFEEMLDAGV 302
DVV+Y+ LI+ R ++A + E+M+
Sbjct: 262 IDAHCKRGKMDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHLLEDMVKRQC 321
Query: 303 RPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEK 362
+PT N L+ +G + +AR V M SPD+ +Y T++ + A E A +
Sbjct: 322 KPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARE 381
Query: 363 FFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYG 422
+ G PNV+TY L+ G K N L + ++ +M+ +G PN +T ++ +
Sbjct: 382 LLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCAPNLFTYTALILGFC 441
Query: 423 KNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELL 469
D + + EM G PD L + + A E+L
Sbjct: 442 SAGQVDGGLKLFGEMVCAGISPDHVVYGTLAAELCKSGRSARALEIL 488
Score = 148 bits (373), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 91/321 (28%), Positives = 149/321 (46%), Gaps = 6/321 (1%)
Query: 164 PSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKA 223
P + +Y I++ +A K +A ++F LL S + P + +I+ A ++ A
Sbjct: 8 PDSWSYGILIDGLAKAGKLNDARDLFQKLL---HSGVTPSTVAYTSLIHGLCMANSFDDA 64
Query: 224 RKLFALMAERGVQQSTVTYNSLMSFETN---YKEVSKIYDQMQRAGLQPDVVSYALLINA 280
R+LFA M RG S VTYN ++ +E + +M G PDVV+Y +++
Sbjct: 65 RELFADMNRRGCPPSPVTYNVIIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDG 124
Query: 281 YGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPD 340
K+ R EEAL +F EM G P +++N ++ +DQA VF M PD
Sbjct: 125 LCKSGRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEARDIPPD 184
Query: 341 ICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYD 400
SY ++ A + A K FRR+ G P+ +TY +I G L++ +E++
Sbjct: 185 SWSYGILIDGLAKAGKLNEAYKLFRRMLDSGITPSAVTYNVVIHGMCLAYTLDEALELFK 244
Query: 401 KMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTAD 460
MR G +P++ F ++DA+ K D A K M G PD + L+S +
Sbjct: 245 SMRSKGCRPSRFTFNILIDAHCKRGKMDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIA 304
Query: 461 ERNEANELLGNFNHPNNEPGI 481
++A LL + +P +
Sbjct: 305 RVDDARHLLEDMVKRQCKPTV 325
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 89/337 (26%), Positives = 161/337 (47%), Gaps = 16/337 (4%)
Query: 94 FNEMDFL----------MLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGR 143
FNEM+ L +I +Q ++A +V M + P S+ L++ +
Sbjct: 138 FNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEARDIPPDSWSYGILIDGLAK 197
Query: 144 GGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPD 203
G+ A +FRRM SG PSA+TY +++ A EA E+F ++ +P
Sbjct: 198 AGKLNEAYKLFRRMLDSGITPSAVTYNVVIHGMCLAYTLDEALELFKSM---RSKGCRPS 254
Query: 204 QKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEV---SKIYD 260
+ F+++I + K G ++A +L M + G VTY++L+S + V + +
Sbjct: 255 RFTFNILIDAHCKRGKMDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHLLE 314
Query: 261 QMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISG 320
M + +P VV+ LI+ KA R +EA V + M+ +G P YN L+ +G
Sbjct: 315 DMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAG 374
Query: 321 MVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYG 380
++AR + M +P++ +YT ++S A+ + A F ++K G PN+ TY
Sbjct: 375 QTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCAPNLFTYT 434
Query: 381 TLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTI 417
LI G+ ++ ++++ +M GI P+ ++ T+
Sbjct: 435 ALILGFCSAGQVDGGLKLFGEMVCAGISPDHVVYGTL 471
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 93/415 (22%), Positives = 191/415 (46%), Gaps = 7/415 (1%)
Query: 70 LKQLKKWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAP 129
L + K N ++ + L + S + + + LI F+ A ++ + MN++G P
Sbjct: 20 LAKAGKLNDARDLFQKL-LHSGVTPSTVAYTSLIHGLCMANSFDDARELFADMNRRGCPP 78
Query: 130 SVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVF 189
S V++ +++A + G + A + ++M G P +TY ++ ++ + +EA +F
Sbjct: 79 SPVTYNVIIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGLCKSGRVEEALLLF 138
Query: 190 MTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSL---M 246
+ E+ P+++ + +I + ++A ++F M R + + +Y L +
Sbjct: 139 NEM---ERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEARDIPPDSWSYGILIDGL 195
Query: 247 SFETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTH 306
+ E K++ +M +G+ P V+Y ++I+ A +EAL +F+ M G RP+
Sbjct: 196 AKAGKLNEAYKLFRRMLDSGITPSAVTYNVVIHGMCLAYTLDEALELFKSMRSKGCRPSR 255
Query: 307 KAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRR 366
+NIL+DA G +D+A + K M D PD+ +Y+T++S + + ++ A
Sbjct: 256 FTFNILIDAHCKRGKMDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHLLED 315
Query: 367 LKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKD 426
+ + P V+T TLI G K +++ E+ D M +G P+ + T++ + +
Sbjct: 316 MVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQ 375
Query: 427 FDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGI 481
+ A +M + G P+ L+S A+ EA + P +
Sbjct: 376 TERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCAPNL 430
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 78/285 (27%), Positives = 134/285 (47%), Gaps = 3/285 (1%)
Query: 200 LKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSL---MSFETNYKEVS 256
+ PD + ++I KAG AR LF + GV STV Y SL + ++ +
Sbjct: 6 VSPDSWSYGILIDGLAKAGKLNDARDLFQKLLHSGVTPSTVAYTSLIHGLCMANSFDDAR 65
Query: 257 KIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAF 316
+++ M R G P V+Y ++I+A K EEA + ++M++ G P YN ++D
Sbjct: 66 ELFADMNRRGCPPSPVTYNVIIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGL 125
Query: 317 AISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNV 376
SG V++A +F M R C+P+ S+ T++ S ++ A + F ++ P+
Sbjct: 126 CKSGRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEARDIPPDS 185
Query: 377 ITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKE 436
+YG LI G AK L + +++ +M +GI P+ + ++ D A+ +K
Sbjct: 186 WSYGILIDGLAKAGKLNEAYKLFRRMLDSGITPSAVTYNVVIHGMCLAYTLDEALELFKS 245
Query: 437 MESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGI 481
M S G P + NIL+ + +EA LL + P +
Sbjct: 246 MRSKGCRPSRFTFNILIDAHCKRGKMDEAFRLLKRMTDDGHVPDV 290
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 77/297 (25%), Positives = 143/297 (48%), Gaps = 12/297 (4%)
Query: 99 FLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQ 158
F +LI A+ K+G ++A ++L M G+ P VV+++ L+ R +A + M
Sbjct: 258 FNILIDAHCKRGKMDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHLLEDMV 317
Query: 159 SSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAG 218
+P+ +T ++ +A + KEA EV ++ +SP D ++ +++ + +AG
Sbjct: 318 KRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSP---DVVTYNTLVHGHCRAG 374
Query: 219 GYEKARKLFALMAERGVQQSTVTYNSLMSF---ETNYKEVSKIYDQMQRAGLQPDVVSYA 275
E+AR+L + M RG+ + VTY +L+S E ++ QM+ +G P++ +Y
Sbjct: 375 QTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCAPNLFTYT 434
Query: 276 LLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFK----C 331
LI + A + + L +F EM+ AG+ P H Y L SG +A + +
Sbjct: 435 ALILGFCSAGQVDGGLKLFGEMVCAGISPDHVVYGTLAAELCKSGRSARALEILREGRES 494
Query: 332 MRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAK 388
+R + ++ Y + ++A ME A F R + + G +P +L+ G K
Sbjct: 495 LRSEAWGDEV--YRFAVDGLLDAGKMEMALGFVRDMVRGGQLPAPERCASLVAGLCK 549
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 105/208 (50%)
Query: 262 MQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGM 321
M + PD SY +LI+ KA + +A +F+++L +GV P+ AY L+ ++
Sbjct: 1 MNERNVSPDSWSYGILIDGLAKAGKLNDARDLFQKLLHSGVTPSTVAYTSLIHGLCMANS 60
Query: 322 VDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGT 381
D AR +F M R C P +Y ++ A +E A +++ +DG VP+V+TY T
Sbjct: 61 FDDARELFADMNRRGCPPSPVTYNVIIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNT 120
Query: 382 LIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCG 441
++ G K +E+ + ++++M G PN+ TI+ + D A + EME+
Sbjct: 121 VMDGLCKSGRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEARD 180
Query: 442 FPPDQKAKNILLSLAKTADERNEANELL 469
PPD + IL+ A + NEA +L
Sbjct: 181 IPPDSWSYGILIDGLAKAGKLNEAYKLF 208
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 61/273 (22%), Positives = 121/273 (44%), Gaps = 3/273 (1%)
Query: 230 MAERGVQQSTVTYNSL---MSFETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARR 286
M ER V + +Y L ++ + ++ ++ +G+ P V+Y LI+ A
Sbjct: 1 MNERNVSPDSWSYGILIDGLAKAGKLNDARDLFQKLLHSGVTPSTVAYTSLIHGLCMANS 60
Query: 287 EEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTT 346
++A +F +M G P+ YN+++DA GM+++A + K M D PD+ +Y T
Sbjct: 61 FDDARELFADMNRRGCPPSPVTYNVIIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNT 120
Query: 347 MLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNG 406
++ + +E A F +++ G PN ++ T+I G + + +++ +++ +M
Sbjct: 121 VMDGLCKSGRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEARD 180
Query: 407 IKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEAN 466
I P+ + ++D K + A ++ M G P N+++ A +EA
Sbjct: 181 IPPDSWSYGILIDGLAKAGKLNEAYKLFRRMLDSGITPSAVTYNVVIHGMCLAYTLDEAL 240
Query: 467 ELLGNFNHPNNEPGINGLSISVDEEDDDDDDDE 499
EL + P +I +D DE
Sbjct: 241 ELFKSMRSKGCRPSRFTFNILIDAHCKRGKMDE 273
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 101/226 (44%), Gaps = 13/226 (5%)
Query: 81 EVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEA 140
EVL+ + + S + + + L+ + + G +A ++LS M +G AP+VV++TAL+
Sbjct: 346 EVLDAM-VSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSG 404
Query: 141 YGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPL 200
+ R A +F +M+SSG P+ TY ++ F A + ++F ++ + +
Sbjct: 405 LCKANRLPEACGVFAQMKSSGCAPNLFTYTALILGFCSAGQVDGGLKLFGEMV---CAGI 461
Query: 201 KPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETN-------YK 253
PD ++ + K+G AR L L R +S + + F + +
Sbjct: 462 SPDHVVYGTLAAELCKSG--RSARALEILREGRESLRSEAWGDEVYRFAVDGLLDAGKME 519
Query: 254 EVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLD 299
M R G P A L+ K+ + EA AV EE++D
Sbjct: 520 MALGFVRDMVRGGQLPAPERCASLVAGLCKSGQGGEARAVLEEIMD 565
>gi|255586139|ref|XP_002533731.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223526356|gb|EEF28650.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 835
Score = 155 bits (392), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 99/365 (27%), Positives = 176/365 (48%), Gaps = 8/365 (2%)
Query: 101 MLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSS 160
+++ G++ A K+ + Y V ++T ++ AY R G+Y A IF RM S
Sbjct: 192 LMVRILGRESQHTVASKLFDVIPLDDYVLDVRAYTTILHAYSRTGKYHRAIEIFERMNES 251
Query: 161 GPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKS-PLKPDQKMFHMMIYMYKKAGG 219
G PS +TY ++L ++ K + + + LLDE +S L D+ ++ + G
Sbjct: 252 GLSPSLVTYNVMLDVY---GKMGRSWDKILELLDEMRSRGLDFDEFTCSTVLSACGREGL 308
Query: 220 YEKARKLFALMAERGVQQSTVTYNSLMSFETN---YKEVSKIYDQMQRAGLQPDVVSYAL 276
++AR+ F+ + G + TVTYN+L+ + E + +M+ PD V+Y
Sbjct: 309 IDEAREFFSGLKSEGYKPGTVTYNALLHVFGKAGIFSEALSVLSEMEENNCPPDAVTYNE 368
Query: 277 LINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDR 336
++ AY +A EE V + M G+ P Y +++A+ G +D+A +F M
Sbjct: 369 VVAAYVRAGFHEEGAVVIDAMASKGIMPNAVTYTTIINAYGRVGDIDKALEMFDQMMELG 428
Query: 337 CSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMM 396
C P++ +Y +L S E K +K +G PN IT+ T++ K + +
Sbjct: 429 CVPNVATYNAVLGMLGKKSLSEEMMKILGHMKLNGCSPNHITWNTMLAMCGKKGMHKYVN 488
Query: 397 EIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILL-SL 455
+++ +M+ G +P++ F T++ AYG+ + A ++EM GF P N LL +L
Sbjct: 489 QVFREMKNCGFEPDRDTFNTLISAYGRCGSNNDAAKMHEEMIKAGFSPCINTYNALLNAL 548
Query: 456 AKTAD 460
A+ D
Sbjct: 549 ARRGD 553
Score = 152 bits (385), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 102/447 (22%), Positives = 198/447 (44%), Gaps = 42/447 (9%)
Query: 71 KQLKKWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPS 130
K + W+ + E+L+ +R + DF+E +++A G++G ++A + S + +GY P
Sbjct: 269 KMGRSWDKILELLDEMRSRGL-DFDEFTCSTVLSACGREGLIDEAREFFSGLKSEGYKPG 327
Query: 131 VVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFM 190
V++ AL+ +G+ G + A ++ M+ + P A+TY ++ +V A +E V
Sbjct: 328 TVTYNALLHVFGKAGIFSEALSVLSEMEENNCPPDAVTYNEVVAAYVRAGFHEEGAVVID 387
Query: 191 TLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSF-- 248
+ + + P+ + +I Y + G +KA ++F M E G + TYN+++
Sbjct: 388 AMASKG---IMPNAVTYTTIINAYGRVGDIDKALEMFDQMMELGCVPNVATYNAVLGMLG 444
Query: 249 ------------------------------------ETNYKEVSKIYDQMQRAGLQPDVV 272
+ +K V++++ +M+ G +PD
Sbjct: 445 KKSLSEEMMKILGHMKLNGCSPNHITWNTMLAMCGKKGMHKYVNQVFREMKNCGFEPDRD 504
Query: 273 SYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCM 332
++ LI+AYG+ +A + EEM+ AG P YN LL+A A G A +V M
Sbjct: 505 TFNTLISAYGRCGSNNDAAKMHEEMIKAGFSPCINTYNALLNALARRGDWKAAESVILDM 564
Query: 333 RRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNL 392
R P SY+ M+ +Y +++G E + + P+ + TL+ K +L
Sbjct: 565 RNKGFRPSETSYSLMVHSYAKGGNVKGIEMIEKSIYDGDIFPSWMLLRTLVLANFKCRSL 624
Query: 393 EKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNIL 452
M + ++ +G KP+ + +++ + KN +D A + + G PD N L
Sbjct: 625 TGMERAFQALQKHGYKPDLVLCNSMLSIFAKNNMYDRAHEMLRLIHDAGLQPDLVTHNSL 684
Query: 453 LSLAKTADERNEANELLGNFNHPNNEP 479
+ + + +A E+L +P
Sbjct: 685 MDMYARGGDCWKAEEVLRMLQTSGGKP 711
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 79/319 (24%), Positives = 143/319 (44%), Gaps = 39/319 (12%)
Query: 203 DQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLM----SFETNYKEVSKI 258
D + + +++ Y + G Y +A ++F M E G+ S VTYN ++ ++ ++ ++
Sbjct: 221 DVRAYTTILHAYSRTGKYHRAIEIFERMNESGLSPSLVTYNVMLDVYGKMGRSWDKILEL 280
Query: 259 YDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAI 318
D+M+ GL D + + +++A G+ +EA F + G +P YN LL F
Sbjct: 281 LDEMRSRGLDFDEFTCSTVLSACGREGLIDEAREFFSGLKSEGYKPGTVTYNALLHVFGK 340
Query: 319 SGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVIT 378
+G+ +A +V M + C PD +Y +++AYV A E + G +PN +T
Sbjct: 341 AGIFSEALSVLSEMEENNCPPDAVTYNEVVAAYVRAGFHEEGAVVIDAMASKGIMPNAVT 400
Query: 379 YGTLIKGYAKVNNLEKMMEIYDK-----------------------------------MR 403
Y T+I Y +V +++K +E++D+ M+
Sbjct: 401 YTTIINAYGRVGDIDKALEMFDQMMELGCVPNVATYNAVLGMLGKKSLSEEMMKILGHMK 460
Query: 404 VNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERN 463
+NG PN + T++ GK ++EM++CGF PD+ N L+S N
Sbjct: 461 LNGCSPNHITWNTMLAMCGKKGMHKYVNQVFREMKNCGFEPDRDTFNTLISAYGRCGSNN 520
Query: 464 EANELLGNFNHPNNEPGIN 482
+A ++ P IN
Sbjct: 521 DAAKMHEEMIKAGFSPCIN 539
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 79/333 (23%), Positives = 148/333 (44%), Gaps = 35/333 (10%)
Query: 99 FLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQ 158
F LI+AYG+ G N A K+ M K G++P + ++ AL+ A R G +K AE++ M+
Sbjct: 506 FNTLISAYGRCGSNNDAAKMHEEMIKAGFSPCINTYNALLNALARRGDWKAAESVILDMR 565
Query: 159 SSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAG 218
+ G RPS +Y +++ + + K E + ++ D + P
Sbjct: 566 NKGFRPSETSYSLMVHSYAKGGNVKGIEMIEKSIYDGDIFP------------------- 606
Query: 219 GYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSKIYDQMQRAGLQPDVVSYALLI 278
+ M R + + SL E + + +Q+ G +PD+V ++
Sbjct: 607 ---------SWMLLRTLVLANFKCRSLTGME-------RAFQALQKHGYKPDLVLCNSML 650
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCS 338
+ + K + A + + DAG++P +N L+D +A G +A V + ++
Sbjct: 651 SIFAKNNMYDRAHEMLRLIHDAGLQPDLVTHNSLMDMYARGGDCWKAEEVLRMLQTSGGK 710
Query: 339 PDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEI 398
PD+ SY T++ + M+ + + G P + TY T I GYA ++ ++
Sbjct: 711 PDLVSYNTVIKGFCRKGLMQEGIRILSEMTSIGVGPCIFTYNTFISGYAAQGMFTEINDV 770
Query: 399 YDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAV 431
M V+ +PN+ + + D Y K + +D A+
Sbjct: 771 ISYMIVHNCRPNELTYKIVADGYCKARRYDEAI 803
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/202 (22%), Positives = 94/202 (46%), Gaps = 6/202 (2%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
L+ A K E+ + K GY P +V +++ + + Y A + R + +G
Sbjct: 614 LVLANFKCRSLTGMERAFQALQKHGYKPDLVLCNSMLSIFAKNNMYDRAHEMLRLIHDAG 673
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
+P +T+ ++ ++ +AEEV L + S KPD ++ +I + + G +
Sbjct: 674 LQPDLVTHNSLMDMYARGGDCWKAEEVLRML---QTSGGKPDLVSYNTVIKGFCRKGLMQ 730
Query: 222 KARKLFALMAERGVQQSTVTYNSLMS---FETNYKEVSKIYDQMQRAGLQPDVVSYALLI 278
+ ++ + M GV TYN+ +S + + E++ + M +P+ ++Y ++
Sbjct: 731 EGIRILSEMTSIGVGPCIFTYNTFISGYAAQGMFTEINDVISYMIVHNCRPNELTYKIVA 790
Query: 279 NAYGKARREEEALAVFEEMLDA 300
+ Y KARR +EA+ ++ D
Sbjct: 791 DGYCKARRYDEAIDFVSKIKDV 812
>gi|449527556|ref|XP_004170776.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Cucumis sativus]
Length = 665
Score = 155 bits (392), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 105/392 (26%), Positives = 174/392 (44%), Gaps = 39/392 (9%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
LI K G KA +V+ + G P V+++ L+ Y + G +A + RM S
Sbjct: 151 LIRGLCKTGKTWKATRVMEILEDSGAVPDVITYNVLISGYCKTGEIGSALQLLDRMSVS- 209
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVF-------------------------------M 190
P +TY IL+ ++ K KEA EV M
Sbjct: 210 --PDVVTYNTILRTLCDSGKLKEAMEVLDRQMQRECYPDVITYTILIEATCKESGVGQAM 267
Query: 191 TLLDEEKSP-LKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSL---M 246
LLDE + KPD ++++I K G ++A + M G Q + +T+N + M
Sbjct: 268 KLLDEMRDKGCKPDVVTYNVLINGICKEGRLDEAIRFLNHMPSYGCQPNVITHNIILRSM 327
Query: 247 SFETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTH 306
+ + K +M R G P VV++ +LIN + A+ V E+M G P
Sbjct: 328 CSTGRWMDAEKFLAEMIRKGCSPSVVTFNILINFLCRKGLIGRAIDVLEKMPQHGCTPNS 387
Query: 307 KAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRR 366
+YN LL A +++A M C PDI +Y T+L+A ++ A + +
Sbjct: 388 LSYNPLLHALCKDKKMERAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQ 447
Query: 367 LKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKD 426
L G P +ITY T+I G +KV + +++ D+M+ G+KP+ ++T++ +
Sbjct: 448 LGSKGCSPVLITYNTVIDGLSKVGKTDDAIKLLDEMKGKGLKPDIITYSTLVGGLSREGK 507
Query: 427 FDSAVVWYKEMESCGFPPDQKAKN-ILLSLAK 457
D A+ ++ ++E G P+ N I+L L K
Sbjct: 508 VDEAIAFFHDLEEMGVKPNAITYNSIMLGLCK 539
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 113/474 (23%), Positives = 201/474 (42%), Gaps = 48/474 (10%)
Query: 2 GMLAPRKFMQKRRKVEVFKDAADEAGKKNWRRLMN---QIEEVGSAVAVLRSERTRGQPL 58
G+ K + R +E+ +D+ + L++ + E+GSA+ +L +
Sbjct: 154 GLCKTGKTWKATRVMEILEDSGAVPDVITYNVLISGYCKTGEIGSALQLLDRMSVSPDVV 213
Query: 59 PKDLVLGTLVRLKQLKKWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKV 118
+ +L TL +LK+ EVL+ ++Q + + + +LI A K+ +A K+
Sbjct: 214 TYNTILRTLCDSGKLKE---AMEVLDR-QMQRECYPDVITYTILIEATCKESGVGQAMKL 269
Query: 119 LSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVE 178
L M KG P VV++ L+ + GR A M S G +P+ +T+ IIL+
Sbjct: 270 LDEMRDKGCKPDVVTYNVLINGICKEGRLDEAIRFLNHMPSYGCQPNVITHNIILRSMCS 329
Query: 179 ANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQS 238
++ +AE K A M +G S
Sbjct: 330 TGRWMDAE--------------------------------------KFLAEMIRKGCSPS 351
Query: 239 TVTYNSLMSFETNYKEVSK---IYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFE 295
VT+N L++F + + + ++M + G P+ +SY L++A K ++ E A+ +
Sbjct: 352 VVTFNILINFLCRKGLIGRAIDVLEKMPQHGCTPNSLSYNPLLHALCKDKKMERAIEYLD 411
Query: 296 EMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNAS 355
M+ G P YN LL A G VD A + + CSP + +Y T++
Sbjct: 412 IMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLGSKGCSPVLITYNTVIDGLSKVG 471
Query: 356 DMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFT 415
+ A K +K G P++ITY TL+ G ++ +++ + + + G+KPN +
Sbjct: 472 KTDDAIKLLDEMKGKGLKPDIITYSTLVGGLSREGKVDEAIAFFHDLEEMGVKPNAITYN 531
Query: 416 TIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELL 469
+IM K + A+ + M + G P + + IL+ EA ELL
Sbjct: 532 SIMLGLCKARQTVRAIDFLAYMVARGCKPTETSYMILIEGLAYEGLAKEALELL 585
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 86/377 (22%), Positives = 166/377 (44%), Gaps = 9/377 (2%)
Query: 108 KQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSAL 167
+ G+ + K L M +G P +++ T+L+ + G+ A + ++ SG P +
Sbjct: 122 RNGELEEGFKFLEDMVCRGDIPDIIACTSLIRGLCKTGKTWKATRVMEILEDSGAVPDVI 181
Query: 168 TYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLF 227
TY +++ + + + A + LLD + + PD ++ ++ +G ++A ++
Sbjct: 182 TYNVLISGYCKTGEIGSA----LQLLD--RMSVSPDVVTYNTILRTLCDSGKLKEAMEVL 235
Query: 228 ALMAERGVQQSTVTYNSLM---SFETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKA 284
+R +TY L+ E+ + K+ D+M+ G +PDVV+Y +LIN K
Sbjct: 236 DRQMQRECYPDVITYTILIEATCKESGVGQAMKLLDEMRDKGCKPDVVTYNVLINGICKE 295
Query: 285 RREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSY 344
R +EA+ M G +P +NI+L + +G A M R CSP + ++
Sbjct: 296 GRLDEAIRFLNHMPSYGCQPNVITHNIILRSMCSTGRWMDAEKFLAEMIRKGCSPSVVTF 355
Query: 345 TTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRV 404
+++ + A ++ Q G PN ++Y L+ K +E+ +E D M
Sbjct: 356 NILINFLCRKGLIGRAIDVLEKMPQHGCTPNSLSYNPLLHALCKDKKMERAIEYLDIMVS 415
Query: 405 NGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNE 464
G P+ + T++ A K+ D AV ++ S G P N ++ + ++
Sbjct: 416 RGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLGSKGCSPVLITYNTVIDGLSKVGKTDD 475
Query: 465 ANELLGNFNHPNNEPGI 481
A +LL +P I
Sbjct: 476 AIKLLDEMKGKGLKPDI 492
>gi|302758218|ref|XP_002962532.1| hypothetical protein SELMODRAFT_404389 [Selaginella moellendorffii]
gi|300169393|gb|EFJ35995.1| hypothetical protein SELMODRAFT_404389 [Selaginella moellendorffii]
Length = 1031
Score = 155 bits (392), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 101/373 (27%), Positives = 176/373 (47%), Gaps = 13/373 (3%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
LI+ KQ + ++A+ ++ G+ P VV+++ L + + GR A + + M G
Sbjct: 337 LISGLCKQQNVDRAKDLVDEFVSSGFVPDVVTYSILADGLCKRGRIDEAFELVKEMSGKG 396
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
P+ +TY ++ +A+K ++A E+ +L+ S PD + +++ K G +
Sbjct: 397 CTPNLVTYNTLIDGLCKASKTEKAYELLESLV---SSGFVPDVVTYTIIVDGLCKEGRLD 453
Query: 222 KARKLFALMAERGVQQSTVTYNSLM---SFETNYKEVSKIYDQMQRAGLQPDVVSYALLI 278
KA K+ M +RG S +TY +LM E I+ +M D ++Y L+
Sbjct: 454 KALKMVEGMLKRGCTPSVITYTALMEGLCRTGRVDEAHHIFKEMVSKDCTADALAYVSLV 513
Query: 279 NAYGKARREEEALAVFEEMLDAGVR--PTHKAYNILLDAFAISGMVDQARTVFKCMRRDR 336
N Y K+ R +EA V + G+R P YN L+D + G +D+ VF+ M
Sbjct: 514 NGYCKSSRTKEAQKVVD-----GIRGTPYIDVYNALMDGYCKEGRLDEIPNVFEDMACRG 568
Query: 337 CSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMM 396
C P+I +Y ++ ++ A F + G VP+V++Y +I G K + ++
Sbjct: 569 CVPNIKTYNIVMDGLCKHGKVDEAFPFLESMHSAGCVPDVVSYNIIIDGLFKASKPKEAR 628
Query: 397 EIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLA 456
++ D+M GI P+ + T+M + K + FD AV K M G PD N L+S
Sbjct: 629 QVLDQMIQAGIPPDAVTYNTLMAQFCKEERFDDAVGILKNMIKAGVDPDNVTYNTLISGL 688
Query: 457 KTADERNEANELL 469
+ +A EL+
Sbjct: 689 SQTNRLGDAYELM 701
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 95/344 (27%), Positives = 163/344 (47%), Gaps = 10/344 (2%)
Query: 99 FLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQ 158
+ ++I + + +KA +L +G+ P V +T L A+ + GR K+A IFR +
Sbjct: 163 YHLVIKSLCQMNQIDKAFTMLDKAKVRGFKPEVSVYTILTRAFCKTGRLKDALEIFRNI- 221
Query: 159 SSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAG 218
P P A+ Y I+ N A E F+ ++E K + PD ++++I KA
Sbjct: 222 ---PSPDAIAYNAIIHGHCRKNDCDGALE-FLKEMNERK--VAPDVFTYNILIDGLCKAS 275
Query: 219 GYEKARKLFALMAERGVQQSTVTYNSLM---SFETNYKEVSKIYDQMQRAGLQPDVVSYA 275
+KA ++ M +RGV TVT+NS+M ++ + M +P +Y
Sbjct: 276 KTDKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGKFERAHSLLAVMAERNCRPSCCTYN 335
Query: 276 LLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRD 335
LI+ K + + A + +E + +G P Y+IL D G +D+A + K M
Sbjct: 336 TLISGLCKQQNVDRAKDLVDEFVSSGFVPDVVTYSILADGLCKRGRIDEAFELVKEMSGK 395
Query: 336 RCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKM 395
C+P++ +Y T++ AS E A + L GFVP+V+TY ++ G K L+K
Sbjct: 396 GCTPNLVTYNTLIDGLCKASKTEKAYELLESLVSSGFVPDVVTYTIIVDGLCKEGRLDKA 455
Query: 396 MEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMES 439
+++ + M G P+ +T +M+ + D A +KEM S
Sbjct: 456 LKMVEGMLKRGCTPSVITYTALMEGLCRTGRVDEAHHIFKEMVS 499
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 80/334 (23%), Positives = 152/334 (45%), Gaps = 14/334 (4%)
Query: 125 KGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKE 184
+G+ S + ++ G A+F RM +G P + TY +++K + N+ +
Sbjct: 119 RGFKHSTFTRNCFLQTLLENGSSDRIPAMFERMLDAGYAPDSYTYHLVIKSLCQMNQIDK 178
Query: 185 AEEVFMTLLDEEK-SPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQS-TVTY 242
A T+LD+ K KP+ ++ ++ + K G + A ++F R + + Y
Sbjct: 179 A----FTMLDKAKVRGFKPEVSVYTILTRAFCKTGRLKDALEIF-----RNIPSPDAIAY 229
Query: 243 NSLMSFETNYKEVS---KIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLD 299
N+++ + + +M + PDV +Y +LI+ KA + ++A + EM+D
Sbjct: 230 NAIIHGHCRKNDCDGALEFLKEMNERKVAPDVFTYNILIDGLCKASKTDKASEMLHEMVD 289
Query: 300 AGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEG 359
GV P +N ++D +G ++A ++ M C P C+Y T++S +++
Sbjct: 290 RGVTPDTVTFNSIMDGLCKAGKFERAHSLLAVMAERNCRPSCCTYNTLISGLCKQQNVDR 349
Query: 360 AEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMD 419
A+ GFVP+V+TY L G K +++ E+ +M G PN + T++D
Sbjct: 350 AKDLVDEFVSSGFVPDVVTYSILADGLCKRGRIDEAFELVKEMSGKGCTPNLVTYNTLID 409
Query: 420 AYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILL 453
K + A + + S GF PD I++
Sbjct: 410 GLCKASKTEKAYELLESLVSSGFVPDVVTYTIIV 443
Score = 135 bits (339), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 101/428 (23%), Positives = 181/428 (42%), Gaps = 47/428 (10%)
Query: 101 MLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSS 160
+LI K +KA ++L M +G P V+ ++M+ + G+++ A ++ M
Sbjct: 266 ILIDGLCKASKTDKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGKFERAHSLLAVMAER 325
Query: 161 GPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDE-EKSPLKPDQKMFHMMIYMYKKAGG 219
RPS TY ++ + A++ L+DE S PD + ++ K G
Sbjct: 326 NCRPSCCTYNTLISGLCKQQNVDRAKD----LVDEFVSSGFVPDVVTYSILADGLCKRGR 381
Query: 220 YEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSKIYDQMQR---AGLQPDVVSYAL 276
++A +L M+ +G + VTYN+L+ + K Y+ ++ +G PDVV+Y +
Sbjct: 382 IDEAFELVKEMSGKGCTPNLVTYNTLIDGLCKASKTEKAYELLESLVSSGFVPDVVTYTI 441
Query: 277 LINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDR 336
+++ K R ++AL + E ML G P+ Y L++ +G VD+A +FK M
Sbjct: 442 IVDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGLCRTGRVDEAHHIFKEMVSKD 501
Query: 337 CSPDICSYTTMLSAYVNASDMEGAEKF--------------------------------F 364
C+ D +Y ++++ Y +S + A+K F
Sbjct: 502 CTADALAYVSLVNGYCKSSRTKEAQKVVDGIRGTPYIDVYNALMDGYCKEGRLDEIPNVF 561
Query: 365 RRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKN 424
+ G VPN+ TY ++ G K +++ + M G P+ + I+D K
Sbjct: 562 EDMACRGCVPNIKTYNIVMDGLCKHGKVDEAFPFLESMHSAGCVPDVVSYNIIIDGLFKA 621
Query: 425 KDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPG---- 480
A +M G PPD N L++ + ++A +L N +P
Sbjct: 622 SKPKEARQVLDQMIQAGIPPDAVTYNTLMAQFCKEERFDDAVGILKNMIKAGVDPDNVTY 681
Query: 481 ---INGLS 485
I+GLS
Sbjct: 682 NTLISGLS 689
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 87/361 (24%), Positives = 155/361 (42%), Gaps = 48/361 (13%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
L+ Y K+G ++ V M +G P++ ++ +M+ + G+ A M S+G
Sbjct: 544 LMDGYCKEGRLDEIPNVFEDMACRGCVPNIKTYNIVMDGLCKHGKVDEAFPFLESMHSAG 603
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
P ++Y II+ +A+K KEA +V ++ ++ + PD ++ ++ + K ++
Sbjct: 604 CVPDVVSYNIIIDGLFKASKPKEARQVLDQMI---QAGIPPDAVTYNTLMAQFCKEERFD 660
Query: 222 KARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSKIYDQMQRAGLQPDVVS----YALL 277
A + M + GV VTYN+L+S + + Y+ M VVS Y +
Sbjct: 661 DAVGILKNMIKAGVDPDNVTYNTLISGLSQTNRLGDAYELMHEMLRNGCVVSACTTYNTI 720
Query: 278 INAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRC 337
I+ K ++AL + + M GV YNI +D G +D+A ++ M R
Sbjct: 721 IDRLCKEGCLKQALLLMDHMTGHGVEANTVTYNIFIDRLCKEGRLDEASSLLSEMDTLR- 779
Query: 338 SPDICSYTTMLSAYVNASDMEGAEKFFRRLK----------------------------- 368
D SYTT++ A ++ A K R +
Sbjct: 780 --DEVSYTTVIIGLCKAEQLDRASKLAREMVAVKGLCITSHTFNLLIDAFTKTKRLDEAL 837
Query: 369 -------QDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAY 421
Q G P+VITY +I K++ ++K E++D+M V GI + +T ++ Y
Sbjct: 838 TLLGLMVQRGCSPSVITYNMVITCLCKLDKVDKAWELFDEMAVRGIVASSVSYTVLI--Y 895
Query: 422 G 422
G
Sbjct: 896 G 896
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 74/306 (24%), Positives = 139/306 (45%), Gaps = 9/306 (2%)
Query: 101 MLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSS 160
++I K +A +VL M + G P V++ LM + + R+ +A I + M +
Sbjct: 613 IIIDGLFKASKPKEARQVLDQMIQAGIPPDAVTYNTLMAQFCKEERFDDAVGILKNMIKA 672
Query: 161 GPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGY 220
G P +TY ++ + N+ +A E+ +L + ++ +I K G
Sbjct: 673 GVDPDNVTYNTLISGLSQTNRLGDAYELMHEML--RNGCVVSACTTYNTIIDRLCKEGCL 730
Query: 221 EKARKLFALMAERGVQQSTVTYNSL---MSFETNYKEVSKIYDQMQRAGLQPDVVSYALL 277
++A L M GV+ +TVTYN + E E S + +M D VSY +
Sbjct: 731 KQALLLMDHMTGHGVEANTVTYNIFIDRLCKEGRLDEASSLLSEMDTL---RDEVSYTTV 787
Query: 278 INAYGKARREEEALAVFEEMLDA-GVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDR 336
I KA + + A + EM+ G+ T +N+L+DAF + +D+A T+ M +
Sbjct: 788 IIGLCKAEQLDRASKLAREMVAVKGLCITSHTFNLLIDAFTKTKRLDEALTLLGLMVQRG 847
Query: 337 CSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMM 396
CSP + +Y +++ ++ A + F + G V + ++Y LI G ++ +
Sbjct: 848 CSPSVITYNMVITCLCKLDKVDKAWELFDEMAVRGIVASSVSYTVLIYGLCGQGRGKEAL 907
Query: 397 EIYDKM 402
++ ++M
Sbjct: 908 QVLEEM 913
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 88/206 (42%), Gaps = 9/206 (4%)
Query: 264 RAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVD 323
R LQP VVS L + + + A+ F D G + + N L +G D
Sbjct: 88 RGTLQPAVVSRVL-----QRLKDPQTAIVFFVWAGDRGFKHSTFTRNCFLQTLLENGSSD 142
Query: 324 QARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLI 383
+ +F+ M +PD +Y ++ + + ++ A + K GF P V Y L
Sbjct: 143 RIPAMFERMLDAGYAPDSYTYHLVIKSLCQMNQIDKAFTMLDKAKVRGFKPEVSVYTILT 202
Query: 384 KGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFP 443
+ + K L+ +EI+ N P+ + I+ + + D D A+ + KEM
Sbjct: 203 RAFCKTGRLKDALEIFR----NIPSPDAIAYNAIIHGHCRKNDCDGALEFLKEMNERKVA 258
Query: 444 PDQKAKNILLSLAKTADERNEANELL 469
PD NIL+ A + ++A+E+L
Sbjct: 259 PDVFTYNILIDGLCKASKTDKASEML 284
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 55/258 (21%), Positives = 111/258 (43%), Gaps = 11/258 (4%)
Query: 88 IQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPS-VVSHTALMEAYGRGGR 146
I++ D + + + LI+ + A +++ M + G S ++ +++ + G
Sbjct: 670 IKAGVDPDNVTYNTLISGLSQTNRLGDAYELMHEMLRNGCVVSACTTYNTIIDRLCKEGC 729
Query: 147 YKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKM 206
K A + M G + +TY I + + + EA + E L+ D+
Sbjct: 730 LKQALLLMDHMTGHGVEANTVTYNIFIDRLCKEGRLDEASSLL-----SEMDTLR-DEVS 783
Query: 207 FHMMIYMYKKAGGYEKARKLF-ALMAERGVQQSTVTYNSLMSFETNYK---EVSKIYDQM 262
+ +I KA ++A KL ++A +G+ ++ T+N L+ T K E + M
Sbjct: 784 YTTVIIGLCKAEQLDRASKLAREMVAVKGLCITSHTFNLLIDAFTKTKRLDEALTLLGLM 843
Query: 263 QRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMV 322
+ G P V++Y ++I K + ++A +F+EM G+ + +Y +L+ G
Sbjct: 844 VQRGCSPSVITYNMVITCLCKLDKVDKAWELFDEMAVRGIVASSVSYTVLIYGLCGQGRG 903
Query: 323 DQARTVFKCMRRDRCSPD 340
+A V + M C D
Sbjct: 904 KEALQVLEEMASSDCEID 921
>gi|296083846|emb|CBI24234.3| unnamed protein product [Vitis vinifera]
Length = 589
Score = 155 bits (392), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 98/388 (25%), Positives = 178/388 (45%), Gaps = 35/388 (9%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
LI AY +QG +A +++ M+ KG P V ++ A++ + G+Y A+ + M G
Sbjct: 138 LINAYCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIG 197
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVF------------------MTLL---------- 193
P TY I+L + +AE +F + LL
Sbjct: 198 MSPDTATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQAL 257
Query: 194 ----DEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSF- 248
D + + L PD ++ ++I + + G +A K+ M E+G VTYN++++
Sbjct: 258 KYFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCVLDVVTYNTILNGL 317
Query: 249 --ETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTH 306
E E +++ +M G+ PD ++ LIN Y K +A+ +FE M+ ++P
Sbjct: 318 CKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYSKDGNMNKAVTLFEMMIQRNLKPDV 377
Query: 307 KAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRR 366
YN L+D F +++ ++ M R P+ SY +++ Y N + A + +
Sbjct: 378 VTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGYCNMGCVSEAFRLWDE 437
Query: 367 LKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKD 426
+ + GF +IT T++KGY + N K E M + GI P+ + T+++ + K ++
Sbjct: 438 MVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNTLINGFIKEEN 497
Query: 427 FDSAVVWYKEMESCGFPPDQKAKNILLS 454
D A +ME+ G PD N++L+
Sbjct: 498 MDRAFALVNKMENSGLLPDVITYNVILN 525
Score = 152 bits (383), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 114/439 (25%), Positives = 195/439 (44%), Gaps = 12/439 (2%)
Query: 37 QIEEVGSAVAVLRSERTRGQPLPKDLVLGTLVRLKQLK-KWNVVSEVLEWLRIQSWWDFN 95
++ E A VL+S+ + +LG LV++ + W + EV ++S N
Sbjct: 42 KLREGCEAFRVLKSKGLCVSINACNSLLGGLVKVGWVDLAWEIYQEV-----VRSGVQVN 96
Query: 96 EMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFR 155
++I A K + LS M +KG P VV++ L+ AY R G + A +
Sbjct: 97 VYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQGLLEEAFELMD 156
Query: 156 RMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYK 215
M G +P TY I+ + K+ A+ V +L K + PD +++++
Sbjct: 157 SMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEML---KIGMSPDTATYNILLVECC 213
Query: 216 KAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETN---YKEVSKIYDQMQRAGLQPDVV 272
+ A ++F M +GV V++++L+ + + K + M+ AGL PD V
Sbjct: 214 RNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNV 273
Query: 273 SYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCM 332
Y +LI + + EAL V +EML+ G YN +L+ M+ +A +F M
Sbjct: 274 IYTILIGGFCRNGVMSEALKVRDEMLEQGCVLDVVTYNTILNGLCKEKMLSEADELFTEM 333
Query: 333 RRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNL 392
PD ++TT+++ Y +M A F + Q P+V+TY TLI G+ K + +
Sbjct: 334 TERGVFPDFYTFTTLINGYSKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEM 393
Query: 393 EKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNIL 452
EK+ E+++ M I PN + +++ Y A + EM GF N +
Sbjct: 394 EKVNELWNDMISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTI 453
Query: 453 LSLAKTADERNEANELLGN 471
+ A +A+E L N
Sbjct: 454 VKGYCRAGNAVKADEFLSN 472
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 91/354 (25%), Positives = 167/354 (47%), Gaps = 6/354 (1%)
Query: 97 MDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRR 156
+ F LI K G ++A K M G AP V +T L+ + R G A +
Sbjct: 238 VSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDE 297
Query: 157 MQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKK 216
M G +TY IL + EA+E+F + + + PD F +I Y K
Sbjct: 298 MLEQGCVLDVVTYNTILNGLCKEKMLSEADELFTEMTER---GVFPDFYTFTTLINGYSK 354
Query: 217 AGGYEKARKLFALMAERGVQQSTVTYNSLM---SFETNYKEVSKIYDQMQRAGLQPDVVS 273
G KA LF +M +R ++ VTYN+L+ + ++V+++++ M + P+ +S
Sbjct: 355 DGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHIS 414
Query: 274 YALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMR 333
Y +LIN Y EA +++EM++ G T N ++ + +G +A M
Sbjct: 415 YGILINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNML 474
Query: 334 RDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLE 393
PD +Y T+++ ++ +M+ A +++ G +P+VITY ++ G+++ ++
Sbjct: 475 LKGIVPDGITYNTLINGFIKEENMDRAFALVNKMENSGLLPDVITYNVILNGFSRQGRMQ 534
Query: 394 KMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQK 447
+ I KM G+ P+++ +T++++ + + A + EM GF PD K
Sbjct: 535 EAELIMLKMIERGVNPDRSTYTSLINGHVTQNNLKEAFRVHDEMLQRGFVPDDK 588
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 90/377 (23%), Positives = 173/377 (45%), Gaps = 6/377 (1%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + F +L+ Y + + + + KG S+ + +L+ + G A I+
Sbjct: 26 NPLVFDLLVRTYVQARKLREGCEAFRVLKSKGLCVSINACNSLLGGLVKVGWVDLAWEIY 85
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
+ + SG + + T I++ + K + + L D E+ + PD ++ +I Y
Sbjct: 86 QEVVRSGVQVNVYTLNIMINALCKNQKIENTKSF---LSDMEEKGVFPDVVTYNTLINAY 142
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSL---MSFETNYKEVSKIYDQMQRAGLQPDV 271
+ G E+A +L M+ +G++ TYN++ + Y + D+M + G+ PD
Sbjct: 143 CRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDT 202
Query: 272 VSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKC 331
+Y +L+ + +A +F+EM GV P +++ L+ + +G +DQA F+
Sbjct: 203 ATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRD 262
Query: 332 MRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNN 391
M+ +PD YT ++ + M A K + + G V +V+TY T++ G K
Sbjct: 263 MKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCVLDVVTYNTILNGLCKEKM 322
Query: 392 LEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNI 451
L + E++ +M G+ P+ FTT+++ Y K+ + + AV ++ M PD N
Sbjct: 323 LSEADELFTEMTERGVFPDFYTFTTLINGYSKDGNMNKAVTLFEMMIQRNLKPDVVTYNT 382
Query: 452 LLSLAKTADERNEANEL 468
L+ E + NEL
Sbjct: 383 LIDGFCKGSEMEKVNEL 399
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 86/179 (48%), Gaps = 6/179 (3%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + + +LI Y G ++A ++ M +KG+ ++++ +++ Y R G A+
Sbjct: 411 NHISYGILINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEFL 470
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
M G P +TY ++ F++ A F + E S L PD +++++ +
Sbjct: 471 SNMLLKGIVPDGITYNTLINGFIKEENMDRA---FALVNKMENSGLLPDVITYNVILNGF 527
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSLMS---FETNYKEVSKIYDQMQRAGLQPD 270
+ G ++A + M ERGV TY SL++ + N KE +++D+M + G PD
Sbjct: 528 SRQGRMQEAELIMLKMIERGVNPDRSTYTSLINGHVTQNNLKEAFRVHDEMLQRGFVPD 586
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 37/156 (23%), Positives = 68/156 (43%), Gaps = 7/156 (4%)
Query: 337 CSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMM 396
C + + ++ YV A + + FR LK G ++ +L+ G KV ++
Sbjct: 23 CGSNPLVFDLLVRTYVQARKLREGCEAFRVLKSKGLCVSINACNSLLGGLVKVGWVDLAW 82
Query: 397 EIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLA 456
EIY ++ +G++ N +++A KN+ ++ + +ME G PD N L++
Sbjct: 83 EIYQEVVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAY 142
Query: 457 KTADERNEANELLGNFNHPNNEPG-------INGLS 485
EA EL+ + + +P INGL
Sbjct: 143 CRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLC 178
>gi|449449677|ref|XP_004142591.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
mitochondrial-like [Cucumis sativus]
Length = 748
Score = 155 bits (392), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 91/361 (25%), Positives = 178/361 (49%), Gaps = 6/361 (1%)
Query: 99 FLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQ 158
+ LI + K G A K M K +P +++T L++ +G+GG+ + +F M
Sbjct: 366 YTTLIHGFFKLGHVRTANKWFDEMLSKKISPDYITYTTLIQGFGQGGKVIEPQNLFHEMI 425
Query: 159 SSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAG 218
S G +P +TY ++ ++ +A + A + ++ + + P+ + +I K G
Sbjct: 426 SRGLKPDEVTYTTLIDVYCKAGEMVNAFSLHNEMV---QMGMTPNIVTYGALIDGLCKHG 482
Query: 219 GYEKARKLFALMAERGVQQSTVTYNSLMSFET---NYKEVSKIYDQMQRAGLQPDVVSYA 275
+ A +L M ++G+Q + YNS+++ N ++ K+ +M+ AG+ PD ++Y
Sbjct: 483 ELDTANELLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAITYT 542
Query: 276 LLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRD 335
+I+AY + ++A + +EMLD G++PT +N+L++ F + GM++ + M
Sbjct: 543 TVIDAYCRLGDIDKAHKLLQEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLGWMLEK 602
Query: 336 RCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKM 395
PD +Y T++ + + M K ++R++ G P+ TY LIKG+ K NL++
Sbjct: 603 GIVPDAITYNTLMKQHCIRNSMNTTTKIYKRMRNQGVAPDSNTYNILIKGHCKARNLKEA 662
Query: 396 MEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSL 455
+Y +M G P T + ++ + K K A ++EM G D + N + +
Sbjct: 663 WFLYKEMIEKGYVPTVTSYNALIKRFYKKKKILEARELFEEMRGHGLVADGEIYNFFVDM 722
Query: 456 A 456
Sbjct: 723 C 723
Score = 154 bits (390), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 99/371 (26%), Positives = 179/371 (48%), Gaps = 6/371 (1%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
+I K G +AEKVL M + P V +T L+ + + G + A F M S
Sbjct: 334 IILLLCKIGKSFEAEKVLREMMSQKIIPDNVVYTTLIHGFFKLGHVRTANKWFDEMLSKK 393
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
P +TY +++ F + K E + +F ++ LKPD+ + +I +Y KAG
Sbjct: 394 ISPDYITYTTLIQGFGQGGKVIEPQNLFHEMISR---GLKPDEVTYTTLIDVYCKAGEMV 450
Query: 222 KARKLFALMAERGVQQSTVTYNSLMSFETNYKEV---SKIYDQMQRAGLQPDVVSYALLI 278
A L M + G+ + VTY +L+ + E+ +++ D+M++ GLQ +V Y ++
Sbjct: 451 NAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGELDTANELLDEMRKKGLQLNVCIYNSMV 510
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCS 338
N KA E+A+ + +EM AG+ P Y ++DA+ G +D+A + + M
Sbjct: 511 NGICKAGNIEQAIKLMKEMEVAGIDPDAITYTTVIDAYCRLGDIDKAHKLLQEMLDRGLQ 570
Query: 339 PDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEI 398
P + ++ +++ + +E ++ + + G VP+ ITY TL+K + N++ +I
Sbjct: 571 PTVVTFNVLMNGFCMLGMLEDGDRLLGWMLEKGIVPDAITYNTLMKQHCIRNSMNTTTKI 630
Query: 399 YDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKT 458
Y +MR G+ P+ + ++ + K ++ A YKEM G+ P + N L+
Sbjct: 631 YKRMRNQGVAPDSNTYNILIKGHCKARNLKEAWFLYKEMIEKGYVPTVTSYNALIKRFYK 690
Query: 459 ADERNEANELL 469
+ EA EL
Sbjct: 691 KKKILEARELF 701
Score = 135 bits (339), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 101/382 (26%), Positives = 166/382 (43%), Gaps = 8/382 (2%)
Query: 91 WWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNA 150
+W N + F + + G ++A K+L + G +V S A + +
Sbjct: 185 YWGPNPIAFDIFFQVLVEIGHLSEARKLLDKLLSYGLVVTVDSCNAFLSRIANNS--EGI 242
Query: 151 EAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMM 210
E + G + +Y II+ K KEA + M + D S PD + +
Sbjct: 243 EMAIKVFCEYGISWNTTSYNIIIYSLCRLGKVKEAHRLLMQM-DFRSS--TPDVVSYSTV 299
Query: 211 IYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYK---EVSKIYDQMQRAGL 267
I Y G +KA KL M +G++ + TYNS++ E K+ +M +
Sbjct: 300 IDGYCHLGELKKALKLMDDMQIKGLKPNRYTYNSIILLLCKIGKSFEAEKVLREMMSQKI 359
Query: 268 QPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQART 327
PD V Y LI+ + K A F+EML + P + Y L+ F G V + +
Sbjct: 360 IPDNVVYTTLIHGFFKLGHVRTANKWFDEMLSKKISPDYITYTTLIQGFGQGGKVIEPQN 419
Query: 328 VFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYA 387
+F M PD +YTT++ Y A +M A + Q G PN++TYG LI G
Sbjct: 420 LFHEMISRGLKPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLC 479
Query: 388 KVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQK 447
K L+ E+ D+MR G++ N I+ ++++ K + + A+ KEME G PD
Sbjct: 480 KHGELDTANELLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAI 539
Query: 448 AKNILLSLAKTADERNEANELL 469
++ + ++A++LL
Sbjct: 540 TYTTVIDAYCRLGDIDKAHKLL 561
Score = 95.5 bits (236), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 72/329 (21%), Positives = 143/329 (43%), Gaps = 43/329 (13%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
+E+ + LI Y K G+ A + + M + G P++V++ AL++ + G A +
Sbjct: 432 DEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGELDTANELL 491
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDE-EKSPLKPDQKMFHMMIYM 213
M+ G + + Y ++ +A ++A + L+ E E + + PD + +I
Sbjct: 492 DEMRKKGLQLNVCIYNSMVNGICKAGNIEQA----IKLMKEMEVAGIDPDAITYTTVIDA 547
Query: 214 YKKAGGYEKARKLFALMAERGVQQSTVTYNSLM---SFETNYKEVSKIYDQMQRAGLQPD 270
Y + G +KA KL M +RG+Q + VT+N LM ++ ++ M G+ PD
Sbjct: 548 YCRLGDIDKAHKLLQEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLGWMLEKGIVPD 607
Query: 271 VVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFK 330
++Y L+ + +++ M + GV P YNIL
Sbjct: 608 AITYNTLMKQHCIRNSMNTTTKIYKRMRNQGVAPDSNTYNIL------------------ 649
Query: 331 CMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVN 390
+ + A +++ A ++ + + G+VP V +Y LIK + K
Sbjct: 650 -----------------IKGHCKARNLKEAWFLYKEMIEKGYVPTVTSYNALIKRFYKKK 692
Query: 391 NLEKMMEIYDKMRVNGIKPNQTIFTTIMD 419
+ + E++++MR +G+ + I+ +D
Sbjct: 693 KILEARELFEEMRGHGLVADGEIYNFFVD 721
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 90/181 (49%), Gaps = 6/181 (3%)
Query: 93 DFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEA 152
D + + + +I AY + GD +KA K+L M +G P+VV+ LM + G ++ +
Sbjct: 535 DPDAITYTTVIDAYCRLGDIDKAHKLLQEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGDR 594
Query: 153 IFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIY 212
+ M G P A+TY ++K N +++ + ++ + PD ++++I
Sbjct: 595 LLGWMLEKGIVPDAITYNTLMKQHCIRNSMNTTTKIYKRMRNQ---GVAPDSNTYNILIK 651
Query: 213 MYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMS-FETNYK--EVSKIYDQMQRAGLQP 269
+ KA ++A L+ M E+G + +YN+L+ F K E +++++M+ GL
Sbjct: 652 GHCKARNLKEAWFLYKEMIEKGYVPTVTSYNALIKRFYKKKKILEARELFEEMRGHGLVA 711
Query: 270 D 270
D
Sbjct: 712 D 712
>gi|238908350|emb|CAZ40335.1| non restoring pentatricopeptide repeat [Raphanus sativus]
Length = 683
Score = 155 bits (392), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 113/479 (23%), Positives = 209/479 (43%), Gaps = 51/479 (10%)
Query: 48 LRSERTRGQPLPKDL----VLGTLVRL----------KQLKKWNVVSEVLEW-LRIQSWW 92
L S+ R +PLP + ++G +VR+ +++++ + ++ + + I+ +
Sbjct: 68 LFSDMLRSRPLPSVIDFNKLMGAVVRMERPDLVISLYQKMERKQIRCDIYSFTILIKCFC 127
Query: 93 DFNEMDFLMLITAYGKQGDFNKAEKVLSF------------------MNKKGYAPSVVSH 134
+++ F + + +GK V++F + + P V++
Sbjct: 128 SCSKLPFAL--STFGKLTKLGLHPDVVTFTTLLHGLCLDHRVSEALDLFHQICRPDVLTF 185
Query: 135 TALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLD 194
T LM R GR A A+ RM +G +P +TY + + A + +
Sbjct: 186 TTLMNGLCREGRVVEAVALLDRMVENGLQPDQITYGTFVDGMCKMGDTVSALNLLRKM-- 243
Query: 195 EEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLM---SFETN 251
EE S +KP+ ++ +I K G + + LF M ++G+ + VTYN ++
Sbjct: 244 EEISHIKPNVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCMIGGFCISGR 303
Query: 252 YKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNI 311
+ ++ +M + P+VV+Y LINA+ K + EA +++EML G+ P YN
Sbjct: 304 WSAAQRLLQEMLERKISPNVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNS 363
Query: 312 LLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDG 371
++D F +D A +F M CSPD+ ++TT++ Y A ++ + + + G
Sbjct: 364 MIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRG 423
Query: 372 FVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAV 431
V N +TY TLI G+ V +L +++ +M +G+ P+ T++D N A+
Sbjct: 424 LVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDAL 483
Query: 432 VWYKEMESC-----------GFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEP 479
+K M+ G PD NIL+ + EA EL H P
Sbjct: 484 EMFKAMQKSKMDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVP 542
Score = 145 bits (366), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 97/365 (26%), Positives = 182/365 (49%), Gaps = 17/365 (4%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + + +I + G ++ A+++L M ++ +P+VV++ AL+ A+ + G++ A ++
Sbjct: 287 NIVTYNCMIGGFCISGRWSAAQRLLQEMLERKISPNVVTYNALINAFVKEGKFFEAAELY 346
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
M G P+ +TY ++ F + ++ AE++F + + SP D F +I Y
Sbjct: 347 DEMLPRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSP---DVFTFTTLIDGY 403
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSKIYD---QMQRAGLQPDV 271
A + +L M RG+ +TVTYN+L+ +++ D QM +G+ PD+
Sbjct: 404 CGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDI 463
Query: 272 VSYALLINAYGKARREEEALAVFEEM------LDA-----GVRPTHKAYNILLDAFAISG 320
V+ L++ + ++AL +F+ M LDA GV P YNIL+ G
Sbjct: 464 VTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILICGLINEG 523
Query: 321 MVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYG 380
+A +++ M PD +Y++M+ S ++ A + F + F PNV+T+
Sbjct: 524 KFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVTFN 583
Query: 381 TLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESC 440
TLI GY K ++ +E++ +M GI + I+ T++ + K + + A+ ++EM S
Sbjct: 584 TLINGYCKAGRVDDGLELFCEMGRRGIVADAIIYITLIYGFRKVGNINGALDIFQEMISS 643
Query: 441 GFPPD 445
G PD
Sbjct: 644 GVYPD 648
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 106/434 (24%), Positives = 190/434 (43%), Gaps = 22/434 (5%)
Query: 30 NWRRLMNQIEEVGSAV-AVLRSERTRGQPL-PKDLVLGTLVRLKQLKKWNVVS--EVLEW 85
+ LMN + G V AV +R L P + GT V K + VS +L
Sbjct: 184 TFTTLMNGLCREGRVVEAVALLDRMVENGLQPDQITYGTFVD-GMCKMGDTVSALNLLRK 242
Query: 86 LRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGG 145
+ S N + + +I K G + + + M KG P++V++ ++ + G
Sbjct: 243 MEEISHIKPNVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCMIGGFCISG 302
Query: 146 RYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQK 205
R+ A+ + + M P+ +TY ++ FV+ KF EA E++ +L + P+
Sbjct: 303 RWSAAQRLLQEMLERKISPNVVTYNALINAFVKEGKFFEAAELYDEMLPR---GIIPNTI 359
Query: 206 MFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVS---KIYDQM 262
++ MI + K + A +F LMA +G T+ +L+ K + ++ +M
Sbjct: 360 TYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEM 419
Query: 263 QRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMV 322
R GL + V+Y LI+ + AL + ++M+ +GV P N LLD +G +
Sbjct: 420 PRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKL 479
Query: 323 DQARTVFKCMRRDR-----------CSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDG 371
A +FK M++ + PD+ +Y ++ +N AE+ + + G
Sbjct: 480 KDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRG 539
Query: 372 FVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAV 431
VP+ ITY ++I G K + L++ +++ M PN F T+++ Y K D +
Sbjct: 540 IVPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGL 599
Query: 432 VWYKEMESCGFPPD 445
+ EM G D
Sbjct: 600 ELFCEMGRRGIVAD 613
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 91/377 (24%), Positives = 178/377 (47%), Gaps = 18/377 (4%)
Query: 108 KQGDFNKAEKVLSFMNKKGYA-PSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSA 166
K GD A +L M + + P+VV ++A+++ + GR+ ++ +F MQ G P+
Sbjct: 229 KMGDTVSALNLLRKMEEISHIKPNVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNI 288
Query: 167 LTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKL 226
+TY ++ F + ++ A+ + +L+ + SP + ++ +I + K G + +A +L
Sbjct: 289 VTYNCMIGGFCISGRWSAAQRLLQEMLERKISP---NVVTYNALINAFVKEGKFFEAAEL 345
Query: 227 FALMAERGVQQSTVTYNSLM---SFETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGK 283
+ M RG+ +T+TYNS++ + ++ M G PDV ++ LI+ Y
Sbjct: 346 YDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCG 405
Query: 284 ARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICS 343
A+R ++ + + EM G+ YN L+ F + G ++ A + + M PDI +
Sbjct: 406 AKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVT 465
Query: 344 YTTMLSAYVNASDMEGAEKFFRRLKQ-----------DGFVPNVITYGTLIKGYAKVNNL 392
T+L + ++ A + F+ +++ +G P+V+TY LI G
Sbjct: 466 CNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILICGLINEGKF 525
Query: 393 EKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNIL 452
+ E+Y++M GI P+ +++++D K D A + M S F P+ N L
Sbjct: 526 LEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTL 585
Query: 453 LSLAKTADERNEANELL 469
++ A ++ EL
Sbjct: 586 INGYCKAGRVDDGLELF 602
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 82/378 (21%), Positives = 180/378 (47%), Gaps = 18/378 (4%)
Query: 75 KWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSH 134
+W+ +L+ + ++ N + + LI A+ K+G F +A ++ M +G P+ +++
Sbjct: 303 RWSAAQRLLQEM-LERKISPNVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITY 361
Query: 135 TALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLD 194
++++ + + R AE +F M + G P T+ ++ + A + + E+ L +
Sbjct: 362 NSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMEL---LHE 418
Query: 195 EEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETN--- 251
+ L + ++ +I+ + G A L M GV VT N+L+ +
Sbjct: 419 MPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGK 478
Query: 252 YKEVSKIYDQMQRA-----------GLQPDVVSYALLINAYGKARREEEALAVFEEMLDA 300
K+ +++ MQ++ G++PDV++Y +LI + EA ++EEM
Sbjct: 479 LKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHR 538
Query: 301 GVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGA 360
G+ P Y+ ++D +D+A +F M SP++ ++ T+++ Y A ++
Sbjct: 539 GIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDG 598
Query: 361 EKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDA 420
+ F + + G V + I Y TLI G+ KV N+ ++I+ +M +G+ P+ ++
Sbjct: 599 LELFCEMGRRGIVADAIIYITLIYGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTG 658
Query: 421 YGKNKDFDSAVVWYKEME 438
+ ++ + AV ++++
Sbjct: 659 FWSKEELERAVAMLEDLQ 676
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 62/255 (24%), Positives = 114/255 (44%), Gaps = 8/255 (3%)
Query: 219 GYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKE---VSKIYDQMQRAGLQPDVVSYA 275
G E A LF+ M S + +N LM + V +Y +M+R ++ D+ S+
Sbjct: 61 GLEDAIDLFSDMLRSRPLPSVIDFNKLMGAVVRMERPDLVISLYQKMERKQIRCDIYSFT 120
Query: 276 LLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRD 335
+LI + + AL+ F ++ G+ P + LL + V +A +F
Sbjct: 121 ILIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFTTLLHGLCLDHRVSEALDLF----HQ 176
Query: 336 RCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKM 395
C PD+ ++TT+++ + A R+ ++G P+ ITYGT + G K+ +
Sbjct: 177 ICRPDVLTFTTLMNGLCREGRVVEAVALLDRMVENGLQPDQITYGTFVDGMCKMGDTVSA 236
Query: 396 MEIYDKM-RVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLS 454
+ + KM ++ IKPN I++ I+D K+ + + EM+ G P+ N ++
Sbjct: 237 LNLLRKMEEISHIKPNVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCMIG 296
Query: 455 LAKTADERNEANELL 469
+ + A LL
Sbjct: 297 GFCISGRWSAAQRLL 311
Score = 95.1 bits (235), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 69/282 (24%), Positives = 131/282 (46%), Gaps = 11/282 (3%)
Query: 99 FLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQ 158
F LI Y + ++L M ++G + V++ L+ + G A + ++M
Sbjct: 396 FTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMI 455
Query: 159 SSGPRPSALTYQIILKLFVEANKFKEAEEVFMTL----LDEEKSP----LKPDQKMFHMM 210
SSG P +T +L + K K+A E+F + +D + S ++PD ++++
Sbjct: 456 SSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNIL 515
Query: 211 IYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSL---MSFETNYKEVSKIYDQMQRAGL 267
I G + +A +L+ M RG+ T+TY+S+ + ++ E ++++ M
Sbjct: 516 ICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKSF 575
Query: 268 QPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQART 327
P+VV++ LIN Y KA R ++ L +F EM G+ Y L+ F G ++ A
Sbjct: 576 SPNVVTFNTLINGYCKAGRVDDGLELFCEMGRRGIVADAIIYITLIYGFRKVGNINGALD 635
Query: 328 VFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQ 369
+F+ M PD + ML+ + + ++E A L++
Sbjct: 636 IFQEMISSGVYPDTITIRNMLTGFWSKEELERAVAMLEDLQR 677
>gi|32527604|gb|AAP86199.1| pentatricopeptide repeat-containing protein [Raphanus sativus]
Length = 686
Score = 155 bits (392), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 113/479 (23%), Positives = 209/479 (43%), Gaps = 51/479 (10%)
Query: 48 LRSERTRGQPLPKDL----VLGTLVRL----------KQLKKWNVVSEVLEW-LRIQSWW 92
L S+ R +PLP + ++G +VR+ +++++ + ++ + + I+ +
Sbjct: 68 LFSDMLRSRPLPSVIDFNKLMGAVVRMERPDLVISLYQKMERKQIRCDIYSFTILIKCFC 127
Query: 93 DFNEMDFLMLITAYGKQGDFNKAEKVLSF------------------MNKKGYAPSVVSH 134
+++ F + + +GK V++F + + P V++
Sbjct: 128 SCSKLPFAL--STFGKLTKLGLHPDVVTFTTLLHGLCLDHRVSEALDLFHQICRPDVLTF 185
Query: 135 TALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLD 194
T LM R GR A A+ RM +G +P +TY + + A + +
Sbjct: 186 TTLMNGLCREGRVVEAVALLDRMVENGLQPDQITYGTFVDGMCKMGDTVSALNLLRKM-- 243
Query: 195 EEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLM---SFETN 251
EE S +KP+ ++ +I K G + + LF M ++G+ + VTYN ++
Sbjct: 244 EEISHIKPNVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCMIGGFCISGR 303
Query: 252 YKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNI 311
+ ++ +M + P+VV+Y LINA+ K + EA +++EML G+ P YN
Sbjct: 304 WSAAQRLLQEMLERKISPNVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNS 363
Query: 312 LLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDG 371
++D F +D A +F M CSPD+ ++TT++ Y A ++ + + + G
Sbjct: 364 MIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRG 423
Query: 372 FVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAV 431
V N +TY TLI G+ V +L +++ +M +G+ P+ T++D N A+
Sbjct: 424 LVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDAL 483
Query: 432 VWYKEMESC-----------GFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEP 479
+K M+ G PD NIL+ + EA EL H P
Sbjct: 484 EMFKAMQKSKMDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVP 542
Score = 145 bits (365), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 97/365 (26%), Positives = 182/365 (49%), Gaps = 17/365 (4%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + + +I + G ++ A+++L M ++ +P+VV++ AL+ A+ + G++ A ++
Sbjct: 287 NIVTYNCMIGGFCISGRWSAAQRLLQEMLERKISPNVVTYNALINAFVKEGKFFEAAELY 346
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
M G P+ +TY ++ F + ++ AE++F + + SP D F +I Y
Sbjct: 347 DEMLPRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSP---DVFTFTTLIDGY 403
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSKIYD---QMQRAGLQPDV 271
A + +L M RG+ +TVTYN+L+ +++ D QM +G+ PD+
Sbjct: 404 CGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDI 463
Query: 272 VSYALLINAYGKARREEEALAVFEEM------LDA-----GVRPTHKAYNILLDAFAISG 320
V+ L++ + ++AL +F+ M LDA GV P YNIL+ G
Sbjct: 464 VTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILICGLINEG 523
Query: 321 MVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYG 380
+A +++ M PD +Y++M+ S ++ A + F + F PNV+T+
Sbjct: 524 KFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVTFN 583
Query: 381 TLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESC 440
TLI GY K ++ +E++ +M GI + I+ T++ + K + + A+ ++EM S
Sbjct: 584 TLINGYCKAGRVDDGLELFCEMGRRGIVADAIIYITLIYGFRKVGNINGALDIFQEMISS 643
Query: 441 GFPPD 445
G PD
Sbjct: 644 GVYPD 648
Score = 140 bits (352), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 107/436 (24%), Positives = 191/436 (43%), Gaps = 26/436 (5%)
Query: 30 NWRRLMNQIEEVGSAV-AVLRSERTRGQPL-PKDLVLGTLVRLKQLKKWNVVS--EVLEW 85
+ LMN + G V AV +R L P + GT V K + VS +L
Sbjct: 184 TFTTLMNGLCREGRVVEAVALLDRMVENGLQPDQITYGTFVD-GMCKMGDTVSALNLLRK 242
Query: 86 LRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGG 145
+ S N + + +I K G + + + M KG P++V++ ++ + G
Sbjct: 243 MEEISHIKPNVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCMIGGFCISG 302
Query: 146 RYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSP--LKPD 203
R+ A+ + + M P+ +TY ++ FV+ KF EA E++ +E P + P+
Sbjct: 303 RWSAAQRLLQEMLERKISPNVVTYNALINAFVKEGKFFEAAELY-----DEMLPRGIIPN 357
Query: 204 QKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVS---KIYD 260
++ MI + K + A +F LMA +G T+ +L+ K + ++
Sbjct: 358 TITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLH 417
Query: 261 QMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISG 320
+M R GL + V+Y LI+ + AL + ++M+ +GV P N LLD +G
Sbjct: 418 EMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNG 477
Query: 321 MVDQARTVFKCMRRDR-----------CSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQ 369
+ A +FK M++ + PD+ +Y ++ +N AE+ + +
Sbjct: 478 KLKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPH 537
Query: 370 DGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDS 429
G VP+ ITY ++I G K + L++ +++ M PN F T+++ Y K D
Sbjct: 538 RGIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDD 597
Query: 430 AVVWYKEMESCGFPPD 445
+ + EM G D
Sbjct: 598 GLELFCEMGRRGIVAD 613
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 91/377 (24%), Positives = 178/377 (47%), Gaps = 18/377 (4%)
Query: 108 KQGDFNKAEKVLSFMNKKGYA-PSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSA 166
K GD A +L M + + P+VV ++A+++ + GR+ ++ +F MQ G P+
Sbjct: 229 KMGDTVSALNLLRKMEEISHIKPNVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNI 288
Query: 167 LTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKL 226
+TY ++ F + ++ A+ + +L+ + SP + ++ +I + K G + +A +L
Sbjct: 289 VTYNCMIGGFCISGRWSAAQRLLQEMLERKISP---NVVTYNALINAFVKEGKFFEAAEL 345
Query: 227 FALMAERGVQQSTVTYNSLM---SFETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGK 283
+ M RG+ +T+TYNS++ + ++ M G PDV ++ LI+ Y
Sbjct: 346 YDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCG 405
Query: 284 ARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICS 343
A+R ++ + + EM G+ YN L+ F + G ++ A + + M PDI +
Sbjct: 406 AKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVT 465
Query: 344 YTTMLSAYVNASDMEGAEKFFRRLKQ-----------DGFVPNVITYGTLIKGYAKVNNL 392
T+L + ++ A + F+ +++ +G P+V+TY LI G
Sbjct: 466 CNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILICGLINEGKF 525
Query: 393 EKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNIL 452
+ E+Y++M GI P+ +++++D K D A + M S F P+ N L
Sbjct: 526 LEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTL 585
Query: 453 LSLAKTADERNEANELL 469
++ A ++ EL
Sbjct: 586 INGYCKAGRVDDGLELF 602
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 82/378 (21%), Positives = 180/378 (47%), Gaps = 18/378 (4%)
Query: 75 KWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSH 134
+W+ +L+ + ++ N + + LI A+ K+G F +A ++ M +G P+ +++
Sbjct: 303 RWSAAQRLLQEM-LERKISPNVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITY 361
Query: 135 TALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLD 194
++++ + + R AE +F M + G P T+ ++ + A + + E+ L +
Sbjct: 362 NSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMEL---LHE 418
Query: 195 EEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETN--- 251
+ L + ++ +I+ + G A L M GV VT N+L+ +
Sbjct: 419 MPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGK 478
Query: 252 YKEVSKIYDQMQRA-----------GLQPDVVSYALLINAYGKARREEEALAVFEEMLDA 300
K+ +++ MQ++ G++PDV++Y +LI + EA ++EEM
Sbjct: 479 LKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHR 538
Query: 301 GVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGA 360
G+ P Y+ ++D +D+A +F M SP++ ++ T+++ Y A ++
Sbjct: 539 GIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDG 598
Query: 361 EKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDA 420
+ F + + G V + I Y TLI G+ KV N+ ++I+ +M +G+ P+ ++
Sbjct: 599 LELFCEMGRRGIVADAIIYITLIYGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTG 658
Query: 421 YGKNKDFDSAVVWYKEME 438
+ ++ + AV ++++
Sbjct: 659 FWSKEELERAVAMLEDLQ 676
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 71/325 (21%), Positives = 140/325 (43%), Gaps = 17/325 (5%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + + +I + KQ + AE + M KG +P V + T L++ Y R + +
Sbjct: 357 NTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELL 416
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
M G + +TY ++ F A ++ ++ S + PD + ++
Sbjct: 417 HEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMI---SSGVCPDIVTCNTLLDGL 473
Query: 215 KKAGGYEKARKLFALMAER-----------GVQQSTVTYNSLMSFETN---YKEVSKIYD 260
G + A ++F M + GV+ +TYN L+ N + E ++Y+
Sbjct: 474 CDNGKLKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYE 533
Query: 261 QMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISG 320
+M G+ PD ++Y+ +I+ K R +EA +F M P +N L++ + +G
Sbjct: 534 EMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAG 593
Query: 321 MVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYG 380
VD +F M R D Y T++ + ++ GA F+ + G P+ IT
Sbjct: 594 RVDDGLELFCEMGRRGIVADAIIYITLIYGFRKVGNINGALDIFQEMISSGVYPDTITIR 653
Query: 381 TLIKGYAKVNNLEKMMEIYDKMRVN 405
++ G+ LE+ + + + ++++
Sbjct: 654 NMLTGFWSKEELERAVAMLEDLQMS 678
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 62/255 (24%), Positives = 114/255 (44%), Gaps = 8/255 (3%)
Query: 219 GYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKE---VSKIYDQMQRAGLQPDVVSYA 275
G E A LF+ M S + +N LM + V +Y +M+R ++ D+ S+
Sbjct: 61 GLEDAIDLFSDMLRSRPLPSVIDFNKLMGAVVRMERPDLVISLYQKMERKQIRCDIYSFT 120
Query: 276 LLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRD 335
+LI + + AL+ F ++ G+ P + LL + V +A +F
Sbjct: 121 ILIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFTTLLHGLCLDHRVSEALDLF----HQ 176
Query: 336 RCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKM 395
C PD+ ++TT+++ + A R+ ++G P+ ITYGT + G K+ +
Sbjct: 177 ICRPDVLTFTTLMNGLCREGRVVEAVALLDRMVENGLQPDQITYGTFVDGMCKMGDTVSA 236
Query: 396 MEIYDKM-RVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLS 454
+ + KM ++ IKPN I++ I+D K+ + + EM+ G P+ N ++
Sbjct: 237 LNLLRKMEEISHIKPNVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCMIG 296
Query: 455 LAKTADERNEANELL 469
+ + A LL
Sbjct: 297 GFCISGRWSAAQRLL 311
>gi|357449185|ref|XP_003594869.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355483917|gb|AES65120.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 545
Score = 155 bits (392), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 100/386 (25%), Positives = 193/386 (50%), Gaps = 8/386 (2%)
Query: 88 IQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRY 147
+ + +++ + LI + G+ A ++L ++ K P+VV ++ ++++ +
Sbjct: 155 VAQGFQLDQVSYGTLINGLCRVGETKAAVQLLRRVDGKLVRPNVVMYSTIIDSMCKDKLV 214
Query: 148 KNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMF 207
+A ++ M S P +TY ++ F K K A ++F ++ + + P+ F
Sbjct: 215 NDAFDLYCEMVSKRISPDVVTYSSLISGFCVVGKLKYAVDLFNRMISDN---INPNVYTF 271
Query: 208 HMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSK---IYDQMQR 264
++I + K G +A+ + A+M ++ V+ VTYNSLM K+V+K +++ M +
Sbjct: 272 SILIDGFCKEGKVREAKNVLAVMMKKNVKLDVVTYNSLMDGYCLVKQVNKAKSLFNVMAQ 331
Query: 265 AGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQ 324
G+ PDV SY+++IN + K + +EA+ +FEEM + P YN L+D SG
Sbjct: 332 RGVTPDVWSYSIMINGFCKIKMVDEAMKLFEEMHCKQIFPNVVTYNSLVDGLCKSGRTSC 391
Query: 325 ARTVFKCMRRDRCSP-DICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLI 383
A + M DR P +I +Y ++L A + ++ A ++K+ G P++ TY LI
Sbjct: 392 ALELVDEM-HDRGQPSNIITYNSILDAICKNNHVDKAIVLLTKIKEKGIQPDIFTYTVLI 450
Query: 384 KGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFP 443
G KV L+ ++++ + V G PN +T++++ + FD + +M+ G
Sbjct: 451 NGLCKVGRLDDAQKVFEDLLVKGYSPNIYTYTSLINGFCNKGFFDEGLAMLSKMKDNGCI 510
Query: 444 PDQKAKNILLSLAKTADERNEANELL 469
P+ IL+ DE ++A +LL
Sbjct: 511 PNAITYEILIHSLFEKDENDKAEKLL 536
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 88/324 (27%), Positives = 161/324 (49%), Gaps = 6/324 (1%)
Query: 122 MNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANK 181
M K +P VV++++L+ + G+ K A +F RM S P+ T+ I++ F + K
Sbjct: 224 MVSKRISPDVVTYSSLISGFCVVGKLKYAVDLFNRMISDNINPNVYTFSILIDGFCKEGK 283
Query: 182 FKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVT 241
+EA+ V ++ K +K D ++ ++ Y KA+ LF +MA+RGV +
Sbjct: 284 VREAKNVLAVMM---KKNVKLDVVTYNSLMDGYCLVKQVNKAKSLFNVMAQRGVTPDVWS 340
Query: 242 YNSLMSFETNYK---EVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEML 298
Y+ +++ K E K++++M + P+VV+Y L++ K+ R AL + +EM
Sbjct: 341 YSIMINGFCKIKMVDEAMKLFEEMHCKQIFPNVVTYNSLVDGLCKSGRTSCALELVDEMH 400
Query: 299 DAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDME 358
D G YN +LDA + VD+A + ++ PDI +YT +++ ++
Sbjct: 401 DRGQPSNIITYNSILDAICKNNHVDKAIVLLTKIKEKGIQPDIFTYTVLINGLCKVGRLD 460
Query: 359 GAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIM 418
A+K F L G+ PN+ TY +LI G+ ++ + + KM+ NG PN + ++
Sbjct: 461 DAQKVFEDLLVKGYSPNIYTYTSLINGFCNKGFFDEGLAMLSKMKDNGCIPNAITYEILI 520
Query: 419 DAYGKNKDFDSAVVWYKEMESCGF 442
+ + + D A +EM + G
Sbjct: 521 HSLFEKDENDKAEKLLREMIARGL 544
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 88/389 (22%), Positives = 173/389 (44%), Gaps = 14/389 (3%)
Query: 122 MNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANK 181
M G P ++ LM + + G K + ++F ++ G P A+T+ I++K +
Sbjct: 84 MEFNGIKPDFITCNLLMNCFSQLGHIKFSFSVFAKILKKGYHPDAVTFTILIKGLCLKGE 143
Query: 182 FKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVT 241
+A ++ + + DQ + +I + G + A +L + + V+ + V
Sbjct: 144 VHKALYFHDKVVAQG---FQLDQVSYGTLINGLCRVGETKAAVQLLRRVDGKLVRPNVVM 200
Query: 242 YNSLMSFETNYKEVSKIYD---QMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEML 298
Y++++ K V+ +D +M + PDVV+Y+ LI+ + + + A+ +F M+
Sbjct: 201 YSTIIDSMCKDKLVNDAFDLYCEMVSKRISPDVVTYSSLISGFCVVGKLKYAVDLFNRMI 260
Query: 299 DAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDME 358
+ P ++IL+D F G V +A+ V M + D+ +Y +++ Y +
Sbjct: 261 SDNINPNVYTFSILIDGFCKEGKVREAKNVLAVMMKKNVKLDVVTYNSLMDGYCLVKQVN 320
Query: 359 GAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIM 418
A+ F + Q G P+V +Y +I G+ K+ +++ M+++++M I PN + +++
Sbjct: 321 KAKSLFNVMAQRGVTPDVWSYSIMINGFCKIKMVDEAMKLFEEMHCKQIFPNVVTYNSLV 380
Query: 419 DAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNE 478
D K+ A+ EM G P + N +L + ++A LL +
Sbjct: 381 DGLCKSGRTSCALELVDEMHDRGQPSNIITYNSILDAICKNNHVDKAIVLLTKIKEKGIQ 440
Query: 479 PG-------INGLSISVDEEDDDDDDDED 500
P INGL V DD ED
Sbjct: 441 PDIFTYTVLINGLC-KVGRLDDAQKVFED 468
Score = 115 bits (289), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 73/282 (25%), Positives = 136/282 (48%), Gaps = 6/282 (2%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N F +LI + K+G +A+ VL+ M KK VV++ +LM+ Y + A+++F
Sbjct: 267 NVYTFSILIDGFCKEGKVREAKNVLAVMMKKNVKLDVVTYNSLMDGYCLVKQVNKAKSLF 326
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
M G P +Y I++ F + EA ++F + ++ + P+ ++ ++
Sbjct: 327 NVMAQRGVTPDVWSYSIMINGFCKIKMVDEAMKLFEEMHCKQ---IFPNVVTYNSLVDGL 383
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSK---IYDQMQRAGLQPDV 271
K+G A +L M +RG + +TYNS++ V K + +++ G+QPD+
Sbjct: 384 CKSGRTSCALELVDEMHDRGQPSNIITYNSILDAICKNNHVDKAIVLLTKIKEKGIQPDI 443
Query: 272 VSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKC 331
+Y +LIN K R ++A VFE++L G P Y L++ F G D+ +
Sbjct: 444 FTYTVLINGLCKVGRLDDAQKVFEDLLVKGYSPNIYTYTSLINGFCNKGFFDEGLAMLSK 503
Query: 332 MRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFV 373
M+ + C P+ +Y ++ + + + AEK R + G +
Sbjct: 504 MKDNGCIPNAITYEILIHSLFEKDENDKAEKLLREMIARGLL 545
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 51/221 (23%), Positives = 107/221 (48%)
Query: 269 PDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTV 328
P + + ++ + KA++ + AL++ ++M G++P N+L++ F+ G + + +V
Sbjct: 56 PPAIEFGKILGSLLKAKQYQTALSLSQQMEFNGIKPDFITCNLLMNCFSQLGHIKFSFSV 115
Query: 329 FKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAK 388
F + + PD ++T ++ ++ A F ++ GF + ++YGTLI G +
Sbjct: 116 FAKILKKGYHPDAVTFTILIKGLCLKGEVHKALYFHDKVVAQGFQLDQVSYGTLINGLCR 175
Query: 389 VNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKA 448
V + +++ ++ ++PN +++TI+D+ K+K + A Y EM S PD
Sbjct: 176 VGETKAAVQLLRRVDGKLVRPNVVMYSTIIDSMCKDKLVNDAFDLYCEMVSKRISPDVVT 235
Query: 449 KNILLSLAKTADERNEANELLGNFNHPNNEPGINGLSISVD 489
+ L+S + A +L N P + SI +D
Sbjct: 236 YSSLISGFCVVGKLKYAVDLFNRMISDNINPNVYTFSILID 276
>gi|302142431|emb|CBI19634.3| unnamed protein product [Vitis vinifera]
Length = 839
Score = 155 bits (392), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 102/391 (26%), Positives = 186/391 (47%), Gaps = 12/391 (3%)
Query: 101 MLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSS 160
+++ A+ K G ++A + M G P++V++ +L+ Y G + A+ + + M
Sbjct: 197 IMVNAFCKDGKVDEAAGFVKKMENLGVEPNIVTYHSLINGYVSLGDVEAAKGVLKFMSEK 256
Query: 161 GPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGY 220
G + +TY +++K + + K EAE+V + +E++ L PD++ + ++I Y + G
Sbjct: 257 GVSRNVVTYTLLIKGYCKQCKMDEAEKVLRGM--QEEAALVPDERAYGVLIDGYCRTGKI 314
Query: 221 EKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSK---IYDQMQRAGLQPDVVSYALL 277
+ A +L M G++ + NSL++ E+ + + +M L+PD SY L
Sbjct: 315 DDAVRLLDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEGVITRMVDWNLKPDSYSYNTL 374
Query: 278 INAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRC 337
++ Y + EA + ++ML G+ PT YN LL G D A ++ M +
Sbjct: 375 LDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKRGV 434
Query: 338 SPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMME 397
+PD Y+T+L + EGA ++ + GF + IT+ T+I G K+ + + E
Sbjct: 435 APDEVGYSTLLDGLFKMENFEGASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEAEE 494
Query: 398 IYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAK 457
I+DKM+ G P+ + T++D Y K + A ME P + N L+S
Sbjct: 495 IFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAMEREPISPSIEMYNSLISGLF 554
Query: 458 TADERNEANELLGNFNHPNNEPGINGLSISV 488
+ E +LL E GI GL+ ++
Sbjct: 555 KSRRLVEVTDLL-------TEMGIRGLTPNI 578
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 92/379 (24%), Positives = 179/379 (47%), Gaps = 7/379 (1%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKG-YAPSVVSHTALMEAYGRGGRYKNAEAI 153
N + + +LI Y KQ ++AEKVL M ++ P ++ L++ Y R G+ +A +
Sbjct: 261 NVVTYTLLIKGYCKQCKMDEAEKVLRGMQEEAALVPDERAYGVLIDGYCRTGKIDDAVRL 320
Query: 154 FRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYM 213
M G + + ++ + + + EAE V ++D LKPD ++ ++
Sbjct: 321 LDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEGVITRMVDWN---LKPDSYSYNTLLDG 377
Query: 214 YKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETN---YKEVSKIYDQMQRAGLQPD 270
Y + G +A L M + G++ + +TYN+L+ + + +I+ M + G+ PD
Sbjct: 378 YCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKRGVAPD 437
Query: 271 VVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFK 330
V Y+ L++ K E A +++++L G + +N ++ G + +A +F
Sbjct: 438 EVGYSTLLDGLFKMENFEGASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFD 497
Query: 331 CMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVN 390
M+ CSPD +Y T++ Y AS++ A K ++++ P++ Y +LI G K
Sbjct: 498 KMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAMEREPISPSIEMYNSLISGLFKSR 557
Query: 391 NLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKN 450
L ++ ++ +M + G+ PN + ++D + K D A Y EM G + +
Sbjct: 558 RLVEVTDLLTEMGIRGLTPNIVTYGALIDGWCKEGMLDKAFSSYFEMTENGLSANIIICS 617
Query: 451 ILLSLAKTADERNEANELL 469
++S +EAN L+
Sbjct: 618 TMVSGLYRLGRIDEANLLM 636
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 90/397 (22%), Positives = 176/397 (44%), Gaps = 39/397 (9%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
+E+ + L+ K +F A + + +G+ S ++ ++ + G+ AE IF
Sbjct: 437 DEVGYSTLLDGLFKMENFEGASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEAEEIF 496
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
+M+ G P +TY+ ++ + +A+ +A +V + E+ P+ P +M++ +I
Sbjct: 497 DKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAM---EREPISPSIEMYNSLISGL 553
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSLM---SFETNYKEVSKIYDQMQRAGLQPDV 271
K+ + L M RG+ + VTY +L+ E + Y +M GL ++
Sbjct: 554 FKSRRLVEVTDLLTEMGIRGLTPNIVTYGALIDGWCKEGMLDKAFSSYFEMTENGLSANI 613
Query: 272 VSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKA----------------------- 308
+ + +++ + R +EA + ++M+D G P H+
Sbjct: 614 IICSTMVSGLYRLGRIDEANLLMQKMVDHGFFPDHECFLKSDIRYAAIQKIADSLDESCK 673
Query: 309 ---------YNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEG 359
YNI + +G VD AR F + PD +Y T++ Y A +++
Sbjct: 674 TFLLPNNIVYNIAIAGLCKTGKVDDARRFFSMLSLKGFVPDNFTYCTLIHGYSAAGNVDE 733
Query: 360 AEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMD 419
A + + + G VPN++TY LI G K N+++ ++ K+ G+ PN + T++D
Sbjct: 734 AFRLRDEMLRRGLVPNIVTYNALINGLCKSENVDRAQRLFHKLHQKGLFPNVVTYNTLID 793
Query: 420 AYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLA 456
Y K + D+A +M G P + N+L S++
Sbjct: 794 GYCKIGNMDAAFKLKDKMIEEGISPSIQC-NLLESVS 829
Score = 115 bits (288), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 98/458 (21%), Positives = 176/458 (38%), Gaps = 73/458 (15%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
LI Y K+G+ ++AE V++ M P S+ L++ Y R G A + +M G
Sbjct: 339 LINGYCKRGEIHEAEGVITRMVDWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEG 398
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
P+ LTY +LK F +A +++ ++ K + PD+ + ++ K +E
Sbjct: 399 IEPTVLTYNTLLKGLCRVGAFDDALQIWHLMM---KRGVAPDEVGYSTLLDGLFKMENFE 455
Query: 222 KARKLFALMAERGVQQSTVTYNSLMSFETNYK---EVSKIYDQMQRAGLQPDVVSYALLI 278
A L+ + RG +S +T+N+++S E +I+D+M+ G PD ++Y LI
Sbjct: 456 GASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLI 515
Query: 279 NAYGKA-----------------------------------RREEEALAVFEEMLDAGVR 303
+ Y KA RR E + EM G+
Sbjct: 516 DGYCKASNVGQAFKVKGAMEREPISPSIEMYNSLISGLFKSRRLVEVTDLLTEMGIRGLT 575
Query: 304 PTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKF 363
P Y L+D + GM+D+A + + M + S +I +TM+S ++ A
Sbjct: 576 PNIVTYGALIDGWCKEGMLDKAFSSYFEMTENGLSANIIICSTMVSGLYRLGRIDEANLL 635
Query: 364 FRRLKQDGF--------------------------------VPNVITYGTLIKGYAKVNN 391
+++ GF +PN I Y I G K
Sbjct: 636 MQKMVDHGFFPDHECFLKSDIRYAAIQKIADSLDESCKTFLLPNNIVYNIAIAGLCKTGK 695
Query: 392 LEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNI 451
++ + + + G P+ + T++ Y + D A EM G P+ N
Sbjct: 696 VDDARRFFSMLSLKGFVPDNFTYCTLIHGYSAAGNVDEAFRLRDEMLRRGLVPNIVTYNA 755
Query: 452 LLSLAKTADERNEANELLGNFNHPNNEPGINGLSISVD 489
L++ ++ + A L + P + + +D
Sbjct: 756 LINGLCKSENVDRAQRLFHKLHQKGLFPNVVTYNTLID 793
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 89/362 (24%), Positives = 154/362 (42%), Gaps = 23/362 (6%)
Query: 124 KKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFK 183
++ + P+V S+ L+ RG Y A ++ V+ KFK
Sbjct: 61 QQNFRPNVKSYCKLVHILSRGRMYDETRAYLNQL-------------------VDLCKFK 101
Query: 184 EAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYN 243
+ V L +F M++ +Y + G + A +F M + G S + N
Sbjct: 102 DRGNVIWDELVGVYREFAFSPTVFDMILKVYVEKGLTKNALYVFDNMGKCGRIPSLRSCN 161
Query: 244 SLMSFETNYKEVSK---IYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDA 300
SL++ E +Y QM R G+ PDV ++++NA+ K + +EA ++M +
Sbjct: 162 SLLNNLVKNGETHTAHYVYQQMIRVGIVPDVFMVSIMVNAFCKDGKVDEAAGFVKKMENL 221
Query: 301 GVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGA 360
GV P Y+ L++ + G V+ A+ V K M S ++ +YT ++ Y M+ A
Sbjct: 222 GVEPNIVTYHSLINGYVSLGDVEAAKGVLKFMSEKGVSRNVVTYTLLIKGYCKQCKMDEA 281
Query: 361 EKFFRRLKQD-GFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMD 419
EK R ++++ VP+ YG LI GY + ++ + + D+M G+K N I ++++
Sbjct: 282 EKVLRGMQEEAALVPDERAYGVLIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLIN 341
Query: 420 AYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEP 479
Y K + A M PD + N LL +EA L EP
Sbjct: 342 GYCKRGEIHEAEGVITRMVDWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEP 401
Query: 480 GI 481
+
Sbjct: 402 TV 403
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 37/189 (19%), Positives = 81/189 (42%), Gaps = 23/189 (12%)
Query: 263 QRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLD---------------AGV----- 302
++ +P+V SY L++ + R +E A +++D GV
Sbjct: 60 KQQNFRPNVKSYCKLVHILSRGRMYDETRAYLNQLVDLCKFKDRGNVIWDELVGVYREFA 119
Query: 303 -RPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAE 361
PT ++++L + G+ A VF M + P + S ++L+ V + A
Sbjct: 120 FSPT--VFDMILKVYVEKGLTKNALYVFDNMGKCGRIPSLRSCNSLLNNLVKNGETHTAH 177
Query: 362 KFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAY 421
++++ + G VP+V ++ + K +++ KM G++PN + ++++ Y
Sbjct: 178 YVYQQMIRVGIVPDVFMVSIMVNAFCKDGKVDEAAGFVKKMENLGVEPNIVTYHSLINGY 237
Query: 422 GKNKDFDSA 430
D ++A
Sbjct: 238 VSLGDVEAA 246
>gi|15228763|ref|NP_188886.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75223290|sp|Q6NQ83.1|PP247_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g22470, mitochondrial; Flags: Precursor
gi|34365775|gb|AAQ65199.1| At3g22470 [Arabidopsis thaliana]
gi|51968798|dbj|BAD43091.1| hypothetical protein [Arabidopsis thaliana]
gi|332643122|gb|AEE76643.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 619
Score = 155 bits (392), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 89/358 (24%), Positives = 179/358 (50%), Gaps = 6/358 (1%)
Query: 101 MLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSS 160
++I + K G F+ A + + M KG VV++++L+ G++ + + R M
Sbjct: 250 IVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGR 309
Query: 161 GPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGY 220
P +T+ ++ +FV+ K EA+E++ ++ + PD ++ +I + K
Sbjct: 310 NIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITR---GIAPDTITYNSLIDGFCKENCL 366
Query: 221 EKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVS---KIYDQMQRAGLQPDVVSYALL 277
+A ++F LM +G + VTY+ L++ K V +++ ++ GL P+ ++Y L
Sbjct: 367 HEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTL 426
Query: 278 INAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRC 337
+ + ++ + A +F+EM+ GV P+ Y ILLD +G +++A +F+ M++ R
Sbjct: 427 VLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRM 486
Query: 338 SPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMME 397
+ I Y ++ NAS ++ A F L G P+V+TY +I G K +L +
Sbjct: 487 TLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADM 546
Query: 398 IYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSL 455
++ KM+ +G P+ + ++ A+ S+V +EM+ CGF D +++ +
Sbjct: 547 LFRKMKEDGCTPDDFTYNILIRAHLGGSGLISSVELIEEMKVCGFSADSSTIKMVIDM 604
Score = 151 bits (382), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 93/399 (23%), Positives = 190/399 (47%), Gaps = 9/399 (2%)
Query: 89 QSW---WDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGG 145
++W ++ + + F L+ + +G ++A ++ M + P +V+ + L+ G
Sbjct: 130 RAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKG 189
Query: 146 RYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQK 205
R A + RM G +P +TY +L ++ A ++F + E+ +K
Sbjct: 190 RVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKM---EERNIKASVV 246
Query: 206 MFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETN---YKEVSKIYDQM 262
+ ++I K G ++ A LF M +G++ VTY+SL+ N + + +K+ +M
Sbjct: 247 QYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREM 306
Query: 263 QRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMV 322
+ PDVV+++ LI+ + K + EA ++ EM+ G+ P YN L+D F +
Sbjct: 307 IGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCL 366
Query: 323 DQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTL 382
+A +F M C PDI +Y+ ++++Y A ++ + FR + G +PN ITY TL
Sbjct: 367 HEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTL 426
Query: 383 IKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGF 442
+ G+ + L E++ +M G+ P+ + ++D N + + A+ +++M+
Sbjct: 427 VLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRM 486
Query: 443 PPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGI 481
NI++ A + ++A L + + +P +
Sbjct: 487 TLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDV 525
Score = 132 bits (333), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 100/462 (21%), Positives = 206/462 (44%), Gaps = 11/462 (2%)
Query: 33 RLMNQIEEVGSAVAV-LRSERTRGQPLPKDLVLGTLVR-LKQLKKWNVVSEVLEWLRIQS 90
RL N I ++ A+ L + +PLP + L + + K++++V + + +
Sbjct: 41 RLRNGIVDIKVNDAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNG 100
Query: 91 WWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNA 150
+ + ++I Y ++ A VL K GY P ++ + L+ + GR A
Sbjct: 101 I-EHDMYTMTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEA 159
Query: 151 EAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEE-KSPLKPDQKMFHM 209
A+ RM RP +T ++ + EA + L+D + +PD+ +
Sbjct: 160 VALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEA----LVLIDRMVEYGFQPDEVTYGP 215
Query: 210 MIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSL---MSFETNYKEVSKIYDQMQRAG 266
++ K+G A LF M ER ++ S V Y+ + + + ++ + ++++M+ G
Sbjct: 216 VLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKG 275
Query: 267 LQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQAR 326
++ DVV+Y+ LI + ++ + EM+ + P ++ L+D F G + +A+
Sbjct: 276 IKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAK 335
Query: 327 TVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGY 386
++ M +PD +Y +++ + + + A + F + G P+++TY LI Y
Sbjct: 336 ELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSY 395
Query: 387 AKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQ 446
K ++ M ++ ++ G+ PN + T++ + ++ ++A ++EM S G PP
Sbjct: 396 CKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSV 455
Query: 447 KAKNILLSLAKTADERNEANELLGNFNHPNNEPGINGLSISV 488
ILL E N+A E+ GI +I +
Sbjct: 456 VTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIII 497
Score = 115 bits (287), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 88/410 (21%), Positives = 176/410 (42%), Gaps = 6/410 (1%)
Query: 88 IQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRY 147
IQS +DF L +A + ++ M G + + T ++ Y R +
Sbjct: 62 IQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMTIMINCYCRKKKL 121
Query: 148 KNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMF 207
A ++ R G P +T+ ++ F + EA + +++ ++ +PD
Sbjct: 122 LFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQ---RPDLVTV 178
Query: 208 HMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSF---ETNYKEVSKIYDQMQR 264
+I G +A L M E G Q VTY +++ N ++ +M+
Sbjct: 179 STLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEE 238
Query: 265 AGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQ 324
++ VV Y+++I++ K ++AL++F EM G++ Y+ L+ G D
Sbjct: 239 RNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDD 298
Query: 325 ARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIK 384
+ + M PD+ +++ ++ +V + A++ + + G P+ ITY +LI
Sbjct: 299 GAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLID 358
Query: 385 GYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPP 444
G+ K N L + +++D M G +P+ ++ ++++Y K K D + ++E+ S G P
Sbjct: 359 GFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIP 418
Query: 445 DQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGINGLSISVDEEDDD 494
+ N L+ + + N A EL P + I +D D+
Sbjct: 419 NTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDN 468
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 89/200 (44%), Gaps = 6/200 (3%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + + L+ + + G N A+++ M +G PSVV++ L++ G A IF
Sbjct: 419 NTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIF 478
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
+MQ S Y II+ A+K +A +F +L D+ +KPD +++MI
Sbjct: 479 EKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDK---GVKPDVVTYNVMIGGL 535
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFE---TNYKEVSKIYDQMQRAGLQPDV 271
K G +A LF M E G TYN L+ + ++ ++M+ G D
Sbjct: 536 CKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLISSVELIEEMKVCGFSADS 595
Query: 272 VSYALLINAYGKARREEEAL 291
+ ++I+ R ++ L
Sbjct: 596 STIKMVIDMLSDRRLDKSFL 615
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 46/211 (21%), Positives = 86/211 (40%)
Query: 289 EALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTML 348
+A+ +FE M+ + PT +N L A A + D K M + D+ + T M+
Sbjct: 53 DAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMTIMI 112
Query: 349 SAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIK 408
+ Y + A R + G+ P+ IT+ TL+ G+ + + + + D+M +
Sbjct: 113 NCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQR 172
Query: 409 PNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANEL 468
P+ +T+++ A+V M GF PD+ +L+ + A +L
Sbjct: 173 PDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDL 232
Query: 469 LGNFNHPNNEPGINGLSISVDEEDDDDDDDE 499
N + + SI +D D D+
Sbjct: 233 FRKMEERNIKASVVQYSIVIDSLCKDGSFDD 263
>gi|326505340|dbj|BAK03057.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326511084|dbj|BAJ91889.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326518326|dbj|BAJ88192.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326518558|dbj|BAJ88308.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 556
Score = 155 bits (392), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 97/355 (27%), Positives = 174/355 (49%), Gaps = 6/355 (1%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
LI +G + A VL M ++G P VV++T L+EA + YK A + M+ G
Sbjct: 158 LIRGLCGRGRTDNALAVLDDMLRRGCVPDVVTYTILLEATCKRSGYKQAVKLLDEMRDKG 217
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
P +TY +++ + + +A E +L +P+ +++++ A +E
Sbjct: 218 CAPDIVTYNVVVNGICQEGRVDDAMEFLKSL---PSYGCEPNTVSYNIVLKGLCTAERWE 274
Query: 222 KARKLFALMAERGVQQSTVTYNSLMSFETNYKEVS---KIYDQMQRAGLQPDVVSYALLI 278
A KL A M+ +G + VT+N L+SF V +I DQ+ + G P+ +SY ++
Sbjct: 275 DAEKLMAEMSRKGRPPNVVTFNMLISFLCRRGLVEPAMEILDQIPKYGCTPNSLSYNPIL 334
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCS 338
+A+ K ++ + A+A E M+ +G P +YN LL A G VD A + ++ C+
Sbjct: 335 HAFCKQKKMDRAMAFVELMVSSGCYPDIVSYNTLLTALCRGGEVDAAVELLHQLKDKGCT 394
Query: 339 PDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEI 398
P + SY T++ A E A + + G P++ITY T+ G + +E+ ++
Sbjct: 395 PVLISYNTVIDGLTKAGKTEEALELLNEMVTKGLQPDIITYSTISSGLCREGRIEEAIKA 454
Query: 399 YDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILL 453
+ K++ GI+PN ++ I+ K + SA+ + M S G P++ IL+
Sbjct: 455 FCKVQDMGIRPNTVLYNAILLGLCKRRATHSAIDLFTYMVSNGCMPNESTYTILI 509
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 95/390 (24%), Positives = 185/390 (47%), Gaps = 12/390 (3%)
Query: 73 LKKWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVV 132
+KK E R+ + + + M + ++ Y G + A ++++ M + P
Sbjct: 97 IKKLCASGRTAEARRVLASCEPDVMSYNAMVAGYCVTGQLDNARRLVAAMPME---PDTY 153
Query: 133 SHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTL 192
++ L+ GR NA A+ M G P +TY I+L+ + + +K+A + L
Sbjct: 154 TYNTLIRGLCGRGRTDNALAVLDDMLRRGCVPDVVTYTILLEATCKRSGYKQA----VKL 209
Query: 193 LDEEKSP-LKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLM---SF 248
LDE + PD +++++ + G + A + + G + +TV+YN ++
Sbjct: 210 LDEMRDKGCAPDIVTYNVVVNGICQEGRVDDAMEFLKSLPSYGCEPNTVSYNIVLKGLCT 269
Query: 249 ETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKA 308
+++ K+ +M R G P+VV++ +LI+ + E A+ + +++ G P +
Sbjct: 270 AERWEDAEKLMAEMSRKGRPPNVVTFNMLISFLCRRGLVEPAMEILDQIPKYGCTPNSLS 329
Query: 309 YNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLK 368
YN +L AF +D+A + M C PDI SY T+L+A +++ A + +LK
Sbjct: 330 YNPILHAFCKQKKMDRAMAFVELMVSSGCYPDIVSYNTLLTALCRGGEVDAAVELLHQLK 389
Query: 369 QDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFD 428
G P +I+Y T+I G K E+ +E+ ++M G++P+ ++TI + +
Sbjct: 390 DKGCTPVLISYNTVIDGLTKAGKTEEALELLNEMVTKGLQPDIITYSTISSGLCREGRIE 449
Query: 429 SAVVWYKEMESCGFPPDQKAKN-ILLSLAK 457
A+ + +++ G P+ N ILL L K
Sbjct: 450 EAIKAFCKVQDMGIRPNTVLYNAILLGLCK 479
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 98/349 (28%), Positives = 153/349 (43%), Gaps = 16/349 (4%)
Query: 146 RYKNAEAIFRRMQS-SGPRPSAL-TYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPD 203
R + E R ++S +G PSA ++K + + EA V + +PD
Sbjct: 68 RRGDLEEAIRLVESMAGLEPSAAGPCAALIKKLCASGRTAEARRVLASC--------EPD 119
Query: 204 QKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSL---MSFETNYKEVSKIYD 260
++ M+ Y G + AR+L A M ++ T TYN+L + + D
Sbjct: 120 VMSYNAMVAGYCVTGQLDNARRLVAAMP---MEPDTYTYNTLIRGLCGRGRTDNALAVLD 176
Query: 261 QMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISG 320
M R G PDVV+Y +L+ A K ++A+ + +EM D G P YN++++ G
Sbjct: 177 DMLRRGCVPDVVTYTILLEATCKRSGYKQAVKLLDEMRDKGCAPDIVTYNVVVNGICQEG 236
Query: 321 MVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYG 380
VD A K + C P+ SY +L A E AEK + + G PNV+T+
Sbjct: 237 RVDDAMEFLKSLPSYGCEPNTVSYNIVLKGLCTAERWEDAEKLMAEMSRKGRPPNVVTFN 296
Query: 381 TLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESC 440
LI + +E MEI D++ G PN + I+ A+ K K D A+ + + M S
Sbjct: 297 MLISFLCRRGLVEPAMEILDQIPKYGCTPNSLSYNPILHAFCKQKKMDRAMAFVELMVSS 356
Query: 441 GFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGINGLSISVD 489
G PD + N LL+ E + A ELL P + + +D
Sbjct: 357 GCYPDIVSYNTLLTALCRGGEVDAAVELLHQLKDKGCTPVLISYNTVID 405
Score = 108 bits (270), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 78/358 (21%), Positives = 153/358 (42%), Gaps = 70/358 (19%)
Query: 97 MDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRR 156
+ + +L+ A K+ + +A K+L M KG AP +V++ ++ + GR +A +
Sbjct: 188 VTYTILLEATCKRSGYKQAVKLLDEMRDKGCAPDIVTYNVVVNGICQEGRVDDAMEFLKS 247
Query: 157 MQSSGPRPSALTYQIILKLFVEANKFKEAEEVF--------------------------- 189
+ S G P+ ++Y I+LK A ++++AE++
Sbjct: 248 LPSYGCEPNTVSYNIVLKGLCTAERWEDAEKLMAEMSRKGRPPNVVTFNMLISFLCRRGL 307
Query: 190 ----MTLLDE-EKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNS 244
M +LD+ K P+ ++ +++ + K ++A LM G V+YN+
Sbjct: 308 VEPAMEILDQIPKYGCTPNSLSYNPILHAFCKQKKMDRAMAFVELMVSSGCYPDIVSYNT 367
Query: 245 LMSFETNYKEVS---KIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAG 301
L++ EV ++ Q++ G P ++SY +I+ KA + EEAL + EM+ G
Sbjct: 368 LLTALCRGGEVDAAVELLHQLKDKGCTPVLISYNTVIDGLTKAGKTEEALELLNEMVTKG 427
Query: 302 VRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAE 361
++P DI +Y+T+ S +E A
Sbjct: 428 LQP-----------------------------------DIITYSTISSGLCREGRIEEAI 452
Query: 362 KFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMD 419
K F +++ G PN + Y ++ G K ++++ M NG PN++ +T +++
Sbjct: 453 KAFCKVQDMGIRPNTVLYNAILLGLCKRRATHSAIDLFTYMVSNGCMPNESTYTILIE 510
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 71/300 (23%), Positives = 142/300 (47%), Gaps = 8/300 (2%)
Query: 79 VSEVLEWLR-IQSW-WDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTA 136
V + +E+L+ + S+ + N + + +++ + AEK+++ M++KG P+VV+
Sbjct: 238 VDDAMEFLKSLPSYGCEPNTVSYNIVLKGLCTAERWEDAEKLMAEMSRKGRPPNVVTFNM 297
Query: 137 LMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEE 196
L+ R G + A I ++ G P++L+Y IL F + K A F+ L+
Sbjct: 298 LISFLCRRGLVEPAMEILDQIPKYGCTPNSLSYNPILHAFCKQKKMDRAM-AFVELM--V 354
Query: 197 KSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETN---YK 253
S PD ++ ++ + G + A +L + ++G ++YN+++ T +
Sbjct: 355 SSGCYPDIVSYNTLLTALCRGGEVDAAVELLHQLKDKGCTPVLISYNTVIDGLTKAGKTE 414
Query: 254 EVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILL 313
E ++ ++M GLQPD+++Y+ + + + R EEA+ F ++ D G+RP YN +L
Sbjct: 415 EALELLNEMVTKGLQPDIITYSTISSGLCREGRIEEAIKAFCKVQDMGIRPNTVLYNAIL 474
Query: 314 DAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFV 373
A +F M + C P+ +YT ++ ++ A + L G V
Sbjct: 475 LGLCKRRATHSAIDLFTYMVSNGCMPNESTYTILIEGLAYEGLVKEAREMMAELCSRGVV 534
>gi|225451354|ref|XP_002275019.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 744
Score = 155 bits (391), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 95/384 (24%), Positives = 178/384 (46%), Gaps = 6/384 (1%)
Query: 101 MLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSS 160
+LI ++ A VL+ + K G+ P + T L+ G+ A +F +M
Sbjct: 96 ILINSFCHLNRVGFAFSVLAKILKLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMIDE 155
Query: 161 GPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGY 220
G +P+ +TY ++ + A + ++ E+ +PD ++ +I K
Sbjct: 156 GFQPNVVTYGTLINGLCKVGNTSAAIRLLRSM---EQGNCQPDVVIYTSIIDSLCKDRQV 212
Query: 221 EKARKLFALMAERGVQQSTVTYNSLMSFETN---YKEVSKIYDQMQRAGLQPDVVSYALL 277
+A LF+ M +G+ TY SL+ N +K V+ + +QM + + PDVV ++ +
Sbjct: 213 TEAFNLFSQMVGQGISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTV 272
Query: 278 INAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRC 337
++A K + EA + + M+ GV P Y L+D + +D+A VF M R
Sbjct: 273 VDALCKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGF 332
Query: 338 SPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMME 397
+PD+ SYTT+++ Y ++ A F + + ++P+ TY TL+ G V L+ +
Sbjct: 333 APDVISYTTLINGYCKIHKIDKAMYLFEEMCRKEWIPDTKTYNTLMHGLCHVGRLQDAIA 392
Query: 398 IYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAK 457
++ +M G P+ ++ ++D+ KN + A+ K +E+ PD + NI++
Sbjct: 393 LFHEMVARGQMPDLVTYSILLDSLCKNCHLEEAMALLKAIEASNLNPDIQVYNIIIDGMC 452
Query: 458 TADERNEANELLGNFNHPNNEPGI 481
A E A +L N + P +
Sbjct: 453 RAGELEAARDLFSNLSSKGLHPSV 476
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 117/461 (25%), Positives = 197/461 (42%), Gaps = 50/461 (10%)
Query: 37 QIEEVGSAVAVLRSERTRG-QPLPKDLVLGTLVRLKQLKKWNVVSEVLEWL--RIQSWWD 93
+ VG A +VL G QP P TL+R L + E L I +
Sbjct: 103 HLNRVGFAFSVLAKILKLGHQPDPTTFT--TLIR--GLCVEGKIGEALHLFDKMIDEGFQ 158
Query: 94 FNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAI 153
N + + LI K G+ + A ++L M + P VV +T+++++ + + A +
Sbjct: 159 PNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAFNL 218
Query: 154 FRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEE-KSPLKPDQKMFHMMIY 212
F +M G P TY ++ ++K TLL++ S + PD +F ++
Sbjct: 219 FSQMVGQGISPDIFTYTSLVHALCNLCEWKHVT----TLLNQMVNSKILPDVVIFSTVVD 274
Query: 213 MYKKAGGYEKARKLFALMAERGVQQSTVTYNSLM---SFETNYKEVSKIYDQMQRAGLQP 269
K G +A ++ +M +RGV+ VTY +LM ++ E K++D M R G P
Sbjct: 275 ALCKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGFAP 334
Query: 270 DVVSYALLINAYGKAR-----------------------------------REEEALAVF 294
DV+SY LIN Y K R ++A+A+F
Sbjct: 335 DVISYTTLINGYCKIHKIDKAMYLFEEMCRKEWIPDTKTYNTLMHGLCHVGRLQDAIALF 394
Query: 295 EEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNA 354
EM+ G P Y+ILLD+ + +++A + K + +PDI Y ++ A
Sbjct: 395 HEMVARGQMPDLVTYSILLDSLCKNCHLEEAMALLKAIEASNLNPDIQVYNIIIDGMCRA 454
Query: 355 SDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIF 414
++E A F L G P+V TY +I G K L + +++ +M N P+ +
Sbjct: 455 GELEAARDLFSNLSSKGLHPSVWTYNIMIHGLCKRGLLNEANKLFMEMDGNDCSPDGCTY 514
Query: 415 TTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSL 455
TI + +N + A+ +EM + GF D +L+ +
Sbjct: 515 NTIARGFLQNNETLRAIQLLEEMLARGFSADVSTTTLLVEM 555
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 98/397 (24%), Positives = 184/397 (46%), Gaps = 8/397 (2%)
Query: 97 MDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRR 156
+DF L+T+ K ++ + + M+ G P+V + L+ ++ R A ++ +
Sbjct: 57 VDFAKLLTSIAKMKHYSTVLSLSTQMDSFGVPPNVYTLNILINSFCHLNRVGFAFSVLAK 116
Query: 157 MQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKK 216
+ G +P T+ +++ K EA +F ++DE +P+ + +I K
Sbjct: 117 ILKLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMIDEG---FQPNVVTYGTLINGLCK 173
Query: 217 AGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSK---IYDQMQRAGLQPDVVS 273
G A +L M + Q V Y S++ ++V++ ++ QM G+ PD+ +
Sbjct: 174 VGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAFNLFSQMVGQGISPDIFT 233
Query: 274 YALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMR 333
Y L++A + + +M+++ + P ++ ++DA G V +A + M
Sbjct: 234 YTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVVDALCKEGKVTEAHEIVDMMI 293
Query: 334 RDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLE 393
+ PD+ +YTT++ + S+M+ A K F + + GF P+VI+Y TLI GY K++ ++
Sbjct: 294 QRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGFAPDVISYTTLINGYCKIHKID 353
Query: 394 KMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILL 453
K M ++++M P+ + T+M A+ + EM + G PD +ILL
Sbjct: 354 KAMYLFEEMCRKEWIPDTKTYNTLMHGLCHVGRLQDAIALFHEMVARGQMPDLVTYSILL 413
Query: 454 -SLAKTADERNEANELLGNFNHPNNEPGINGLSISVD 489
SL K EA LL N P I +I +D
Sbjct: 414 DSLCKNC-HLEEAMALLKAIEASNLNPDIQVYNIIID 449
Score = 128 bits (322), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 82/374 (21%), Positives = 166/374 (44%), Gaps = 6/374 (1%)
Query: 99 FLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQ 158
F LI +G +A + M +G+ P+VV++ L+ + G A + R M+
Sbjct: 129 FTTLIRGLCVEGKIGEALHLFDKMIDEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSME 188
Query: 159 SSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAG 218
+P + Y I+ + + EA +F ++ + SP D + +++
Sbjct: 189 QGNCQPDVVIYTSIIDSLCKDRQVTEAFNLFSQMVGQGISP---DIFTYTSLVHALCNLC 245
Query: 219 GYEKARKLFALMAERGVQQSTVTYNSL---MSFETNYKEVSKIYDQMQRAGLQPDVVSYA 275
++ L M + V ++++ + E E +I D M + G++PDVV+Y
Sbjct: 246 EWKHVTTLLNQMVNSKILPDVVIFSTVVDALCKEGKVTEAHEIVDMMIQRGVEPDVVTYT 305
Query: 276 LLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRD 335
L++ + +EA+ VF+ M+ G P +Y L++ + +D+A +F+ M R
Sbjct: 306 TLMDGHCLQSEMDEAVKVFDMMVRKGFAPDVISYTTLINGYCKIHKIDKAMYLFEEMCRK 365
Query: 336 RCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKM 395
PD +Y T++ + ++ A F + G +P+++TY L+ K +LE+
Sbjct: 366 EWIPDTKTYNTLMHGLCHVGRLQDAIALFHEMVARGQMPDLVTYSILLDSLCKNCHLEEA 425
Query: 396 MEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSL 455
M + + + + P+ ++ I+D + + ++A + + S G P NI++
Sbjct: 426 MALLKAIEASNLNPDIQVYNIIIDGMCRAGELEAARDLFSNLSSKGLHPSVWTYNIMIHG 485
Query: 456 AKTADERNEANELL 469
NEAN+L
Sbjct: 486 LCKRGLLNEANKLF 499
Score = 92.8 bits (229), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 96/221 (43%)
Query: 269 PDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTV 328
P +V +A L+ + K + L++ +M GV P NIL+++F V A +V
Sbjct: 54 PSIVDFAKLLTSIAKMKHYSTVLSLSTQMDSFGVPPNVYTLNILINSFCHLNRVGFAFSV 113
Query: 329 FKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAK 388
+ + PD ++TT++ + A F ++ +GF PNV+TYGTLI G K
Sbjct: 114 LAKILKLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMIDEGFQPNVVTYGTLINGLCK 173
Query: 389 VNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKA 448
V N + + M +P+ I+T+I+D+ K++ A + +M G PD
Sbjct: 174 VGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAFNLFSQMVGQGISPDIFT 233
Query: 449 KNILLSLAKTADERNEANELLGNFNHPNNEPGINGLSISVD 489
L+ E LL + P + S VD
Sbjct: 234 YTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVVD 274
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 79/322 (24%), Positives = 140/322 (43%), Gaps = 48/322 (14%)
Query: 45 VAVLRSERTRGQPLPKDLVLGTLVRLKQLKKWNVVSEVLEW--LRIQSWWDFNEMDFLML 102
V L ++ + LP ++ T+V L K V+E E + IQ + + + + L
Sbjct: 250 VTTLLNQMVNSKILPDVVIFSTVV--DALCKEGKVTEAHEIVDMMIQRGVEPDVVTYTTL 307
Query: 103 ITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGR------------------- 143
+ + Q + ++A KV M +KG+AP V+S+T L+ Y +
Sbjct: 308 MDGHCLQSEMDEAVKVFDMMVRKGFAPDVISYTTLINGYCKIHKIDKAMYLFEEMCRKEW 367
Query: 144 ----------------GGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEE 187
GR ++A A+F M + G P +TY I+L + +EA
Sbjct: 368 IPDTKTYNTLMHGLCHVGRLQDAIALFHEMVARGQMPDLVTYSILLDSLCKNCHLEEA-- 425
Query: 188 VFMTLLDE-EKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLM 246
M LL E S L PD ++++++I +AG E AR LF+ ++ +G+ S TYN ++
Sbjct: 426 --MALLKAIEASNLNPDIQVYNIIIDGMCRAGELEAARDLFSNLSSKGLHPSVWTYNIMI 483
Query: 247 SFETN---YKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVR 303
E +K++ +M PD +Y + + + A+ + EEML G
Sbjct: 484 HGLCKRGLLNEANKLFMEMDGNDCSPDGCTYNTIARGFLQNNETLRAIQLLEEMLARGFS 543
Query: 304 PTHKAYNILLDAFAISGMVDQA 325
+L++ + G+ DQ+
Sbjct: 544 ADVSTTTLLVEMLSDDGL-DQS 564
Score = 43.5 bits (101), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 32/160 (20%), Positives = 60/160 (37%)
Query: 322 VDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGT 381
+D A + F + P I + +L++ ++ G PNV T
Sbjct: 37 LDDALSSFNRLLHMHPPPSIVDFAKLLTSIAKMKHYSTVLSLSTQMDSFGVPPNVYTLNI 96
Query: 382 LIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCG 441
LI + +N + + K+ G +P+ T FTT++ A+ + +M G
Sbjct: 97 LINSFCHLNRVGFAFSVLAKILKLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMIDEG 156
Query: 442 FPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGI 481
F P+ L++ + A LL + N +P +
Sbjct: 157 FQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPDV 196
>gi|255566084|ref|XP_002524030.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223536757|gb|EEF38398.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 1016
Score = 155 bits (391), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 99/383 (25%), Positives = 196/383 (51%), Gaps = 7/383 (1%)
Query: 90 SWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKN 149
S N + F +L+ + ++AE++L + +G V++T+LM+ + + G+
Sbjct: 477 SGLKVNNVLFDVLVNNLKRGKRMDEAEELLKDVTSRGLLLDHVNYTSLMDGFFKAGKESA 536
Query: 150 AEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHM 209
A + M +TY +++ +E K+ EA+ V+ +++ L P+Q +++
Sbjct: 537 ALNMVEEMTEKSIPFDVVTYNVLINGLLEHGKY-EAKSVYSGMIE---MGLAPNQATYNI 592
Query: 210 MIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSK---IYDQMQRAG 266
MI Y K G + A +L+ M + S++T N+L+ + E+ K + ++M G
Sbjct: 593 MIKAYCKQGELDNALELWNEMKSHKIMPSSITCNTLVVGLSEAGEIEKAMNVLNEMSVMG 652
Query: 267 LQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQAR 326
+ P++V + +L+NA K+ + L + E+++D G++ +AYN L+ F M +A
Sbjct: 653 IHPNLVIHRVLLNASSKSGKANAVLQMHEQLVDMGLKINQEAYNNLIVVFCRLRMTKKAT 712
Query: 327 TVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGY 386
+V K M RD D +Y ++ Y +S ++ A + ++ +G PN++TY L+ G
Sbjct: 713 SVLKYMIRDGFVADTVTYNALIRGYCESSHVKKALATYTQMLNEGVSPNIVTYNLLLGGL 772
Query: 387 AKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQ 446
+ + E++DKM+ NG+ P+ + + T++ YGK + ++ Y EM + GF P
Sbjct: 773 LGAGLMAERDELFDKMKENGLNPDASTYDTLISGYGKIGNKKESIRLYCEMVAQGFVPKT 832
Query: 447 KAKNILLSLAKTADERNEANELL 469
N+L+S + ++A ELL
Sbjct: 833 STYNVLISDFAKVGKMDQARELL 855
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 109/427 (25%), Positives = 185/427 (43%), Gaps = 62/427 (14%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
+I + + G N+A LS M KK ++ L++ + R G K E I + S G
Sbjct: 83 VIWGFCQHGLVNQAFGFLSIMVKKDTCFDTITCNILVKGFCRIGLAKYGERIMDNLVSGG 142
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
+ + ++ + +A + A ++ + K L D ++ +I + K G Y+
Sbjct: 143 TCKDVIGFNTLIDGYCKAGEMSLALDLVERM---RKEGLLSDIVSYNTLINGFCKRGEYD 199
Query: 222 KARKLFALMAE-RGVQQST--------------------VTYNSLMSF---ETNYKEVSK 257
KA+ L ++E RGV+ S +TY +++S + +E
Sbjct: 200 KAKSLLHEISESRGVKDSVFFNIDDRIKKDDNLNLEADLITYTTIISTYCKQHGLEEARA 259
Query: 258 IYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLD--- 314
+Y++M G PDVV+Y+ ++N K R EA + EM GV P H AY L+D
Sbjct: 260 LYEEMIINGFLPDVVTYSSIVNGLCKDGRLSEAQELLREMKKMGVDPNHVAYTTLIDSLF 319
Query: 315 -------AFA------ISGM----------VD---------QARTVFKCMRRDRCSPDIC 342
AFA + GM VD +A +F+ + + P+
Sbjct: 320 KAGSAWEAFACQSQLVVRGMTLDLVMCTTLVDGLFKSSKPKEAEDMFRALSKLNLIPNSI 379
Query: 343 SYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKM 402
+YT ++ Y DME E + +++ PNVITY ++I GY K L++ + + KM
Sbjct: 380 TYTALIDGYCKVGDMERVESLLQEMEEKHINPNVITYSSIINGYTKKGILDEAINVMKKM 439
Query: 403 RVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADER 462
I PN ++ ++D Y K + A Y EM+ G + ++L++ K
Sbjct: 440 LDQNIIPNAYVYAILIDGYCKAGKQEIATDLYNEMKLSGLKVNNVLFDVLVNNLKRGKRM 499
Query: 463 NEANELL 469
+EA ELL
Sbjct: 500 DEAEELL 506
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 106/435 (24%), Positives = 202/435 (46%), Gaps = 23/435 (5%)
Query: 31 WRRLMNQIEEVGSAVAVLRSER---TRGQPLPKDLVLGTLVRLKQLKKWNVVSEVLEWLR 87
+ L++ + + GSA + RG L DLV+ T + + L K + E + R
Sbjct: 311 YTTLIDSLFKAGSAWEAFACQSQLVVRGMTL--DLVMCTTL-VDGLFKSSKPKEAEDMFR 367
Query: 88 IQSWWDF--NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGG 145
S + N + + LI Y K GD + E +L M +K P+V+++++++ Y + G
Sbjct: 368 ALSKLNLIPNSITYTALIDGYCKVGDMERVESLLQEMEEKHINPNVITYSSIINGYTKKG 427
Query: 146 RYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEK-SPLKPDQ 204
A + ++M P+A Y I++ + +A K +E+ L +E K S LK +
Sbjct: 428 ILDEAINVMKKMLDQNIIPNAYVYAILIDGYCKAGK----QEIATDLYNEMKLSGLKVNN 483
Query: 205 KMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLM-SFETNYKEVSKI--YDQ 261
+F +++ K+ ++A +L + RG+ V Y SLM F KE + + ++
Sbjct: 484 VLFDVLVNNLKRGKRMDEAEELLKDVTSRGLLLDHVNYTSLMDGFFKAGKESAALNMVEE 543
Query: 262 MQRAGLQPDVVSYALLINA---YGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAI 318
M + DVV+Y +LIN +GK EA +V+ M++ G+ P YNI++ A+
Sbjct: 544 MTEKSIPFDVVTYNVLINGLLEHGKY----EAKSVYSGMIEMGLAPNQATYNIMIKAYCK 599
Query: 319 SGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVIT 378
G +D A ++ M+ + P + T++ A ++E A + G PN++
Sbjct: 600 QGELDNALELWNEMKSHKIMPSSITCNTLVVGLSEAGEIEKAMNVLNEMSVMGIHPNLVI 659
Query: 379 YGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEME 438
+ L+ +K ++++++++ G+K NQ + ++ + + + A K M
Sbjct: 660 HRVLLNASSKSGKANAVLQMHEQLVDMGLKINQEAYNNLIVVFCRLRMTKKATSVLKYMI 719
Query: 439 SCGFPPDQKAKNILL 453
GF D N L+
Sbjct: 720 RDGFVADTVTYNALI 734
Score = 121 bits (304), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 96/400 (24%), Positives = 192/400 (48%), Gaps = 22/400 (5%)
Query: 94 FNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAI 153
F+ + + +LI + G + +A+ V S M + G AP+ ++ +++AY + G NA +
Sbjct: 551 FDVVTYNVLINGLLEHGKY-EAKSVYSGMIEMGLAPNQATYNIMIKAYCKQGELDNALEL 609
Query: 154 FRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKS-PLKPDQKMFHMMIY 212
+ M+S PS++T ++ EA + ++A M +L+E + P+ + +++
Sbjct: 610 WNEMKSHKIMPSSITCNTLVVGLSEAGEIEKA----MNVLNEMSVMGIHPNLVIHRVLLN 665
Query: 213 MYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNY---KEVSKIYDQMQRAGLQP 269
K+G ++ + + G++ + YN+L+ K+ + + M R G
Sbjct: 666 ASSKSGKANAVLQMHEQLVDMGLKINQEAYNNLIVVFCRLRMTKKATSVLKYMIRDGFVA 725
Query: 270 DVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVF 329
D V+Y LI Y ++ ++ALA + +ML+ GV P YN+LL +G++ + +F
Sbjct: 726 DTVTYNALIRGYCESSHVKKALATYTQMLNEGVSPNIVTYNLLLGGLLGAGLMAERDELF 785
Query: 330 KCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKV 389
M+ + +PD +Y T++S Y + + + + + + GFVP TY LI +AKV
Sbjct: 786 DKMKENGLNPDASTYDTLISGYGKIGNKKESIRLYCEMVAQGFVPKTSTYNVLISDFAKV 845
Query: 390 NNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAY---GKNKDFDSAVV---------WYKEM 437
+++ E+ ++M+V G+ P+ + + ++ + K+ D D + EM
Sbjct: 846 GKMDQARELLNEMQVRGVPPSSSTYDILICGWCNLSKHPDLDRTLKKIYRTDAKNLITEM 905
Query: 438 ESCGFPPDQKAKNILLSLAKTADERNEANELLGN-FNHPN 476
GF P + + S + +A +LL F+H N
Sbjct: 906 NDKGFVPCKSTIACISSTFARPGKMLDAEKLLKEIFSHAN 945
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 97/422 (22%), Positives = 182/422 (43%), Gaps = 46/422 (10%)
Query: 97 MDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRR 156
+ + +I+ Y KQ +A + M G+ P VV++++++ + GR A+ + R
Sbjct: 239 ITYTTIISTYCKQHGLEEARALYEEMIINGFLPDVVTYSSIVNGLCKDGRLSEAQELLRE 298
Query: 157 MQSSGPRPSALTYQIIL-KLF----------------------------------VEANK 181
M+ G P+ + Y ++ LF +++K
Sbjct: 299 MKKMGVDPNHVAYTTLIDSLFKAGSAWEAFACQSQLVVRGMTLDLVMCTTLVDGLFKSSK 358
Query: 182 FKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVT 241
KEAE++F L K L P+ + +I Y K G E+ L M E+ + + +T
Sbjct: 359 PKEAEDMFRAL---SKLNLIPNSITYTALIDGYCKVGDMERVESLLQEMEEKHINPNVIT 415
Query: 242 YNSLMSFETN---YKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEML 298
Y+S+++ T E + +M + P+ YA+LI+ Y KA ++E A ++ EM
Sbjct: 416 YSSIINGYTKKGILDEAINVMKKMLDQNIIPNAYVYAILIDGYCKAGKQEIATDLYNEMK 475
Query: 299 DAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDME 358
+G++ + +++L++ +D+A + K + D +YT+++ + A
Sbjct: 476 LSGLKVNNVLFDVLVNNLKRGKRMDEAEELLKDVTSRGLLLDHVNYTSLMDGFFKAGKES 535
Query: 359 GAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIM 418
A + + +V+TY LI G + E +Y M G+ PNQ + ++
Sbjct: 536 AALNMVEEMTEKSIPFDVVTYNVLINGLLEHGKYEAK-SVYSGMIEMGLAPNQATYNIMI 594
Query: 419 DAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFN----H 474
AY K + D+A+ + EM+S P N L+ A E +A +L + H
Sbjct: 595 KAYCKQGELDNALELWNEMKSHKIMPSSITCNTLVVGLSEAGEIEKAMNVLNEMSVMGIH 654
Query: 475 PN 476
PN
Sbjct: 655 PN 656
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 79/377 (20%), Positives = 168/377 (44%), Gaps = 27/377 (7%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNK-KGYAPSV--------------------VSHTALMEA 140
LI + K+G+++KA+ +L +++ +G SV +++T ++
Sbjct: 188 LINGFCKRGEYDKAKSLLHEISESRGVKDSVFFNIDDRIKKDDNLNLEADLITYTTIIST 247
Query: 141 YGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPL 200
Y + + A A++ M +G P +TY I+ + + EA+E+ L + +K +
Sbjct: 248 YCKQHGLEEARALYEEMIINGFLPDVVTYSSIVNGLCKDGRLSEAQEL---LREMKKMGV 304
Query: 201 KPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMS--FETNY-KEVSK 257
P+ + +I KAG +A + + RG+ V +L+ F+++ KE
Sbjct: 305 DPNHVAYTTLIDSLFKAGSAWEAFACQSQLVVRGMTLDLVMCTTLVDGLFKSSKPKEAED 364
Query: 258 IYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFA 317
++ + + L P+ ++Y LI+ Y K E ++ +EM + + P Y+ +++ +
Sbjct: 365 MFRALSKLNLIPNSITYTALIDGYCKVGDMERVESLLQEMEEKHINPNVITYSSIINGYT 424
Query: 318 ISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVI 377
G++D+A V K M P+ Y ++ Y A E A + +K G N +
Sbjct: 425 KKGILDEAINVMKKMLDQNIIPNAYVYAILIDGYCKAGKQEIATDLYNEMKLSGLKVNNV 484
Query: 378 TYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEM 437
+ L+ + +++ E+ + G+ + +T++MD + K +A+ +EM
Sbjct: 485 LFDVLVNNLKRGKRMDEAEELLKDVTSRGLLLDHVNYTSLMDGFFKAGKESAALNMVEEM 544
Query: 438 ESCGFPPDQKAKNILLS 454
P D N+L++
Sbjct: 545 TEKSIPFDVVTYNVLIN 561
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/178 (23%), Positives = 83/178 (46%), Gaps = 5/178 (2%)
Query: 254 EVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILL 313
+V IY +M + + P+V ++ +L++A+ K AL + + V YN ++
Sbjct: 28 QVCDIYTEMLCSAVPPNVYTHNVLVHAWCKMGNLILALDLLR---NVDVEVDTVTYNTVI 84
Query: 314 DAFAISGMVDQARTVFKCM-RRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGF 372
F G+V+QA M ++D C D + ++ + + E+ L G
Sbjct: 85 WGFCQHGLVNQAFGFLSIMVKKDTCF-DTITCNILVKGFCRIGLAKYGERIMDNLVSGGT 143
Query: 373 VPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSA 430
+VI + TLI GY K + +++ ++MR G+ + + T+++ + K ++D A
Sbjct: 144 CKDVIGFNTLIDGYCKAGEMSLALDLVERMRKEGLLSDIVSYNTLINGFCKRGEYDKA 201
>gi|11994279|dbj|BAB01462.1| unnamed protein product [Arabidopsis thaliana]
Length = 648
Score = 155 bits (391), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 89/358 (24%), Positives = 179/358 (50%), Gaps = 6/358 (1%)
Query: 101 MLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSS 160
++I + K G F+ A + + M KG VV++++L+ G++ + + R M
Sbjct: 279 IVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGR 338
Query: 161 GPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGY 220
P +T+ ++ +FV+ K EA+E++ ++ + PD ++ +I + K
Sbjct: 339 NIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITR---GIAPDTITYNSLIDGFCKENCL 395
Query: 221 EKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVS---KIYDQMQRAGLQPDVVSYALL 277
+A ++F LM +G + VTY+ L++ K V +++ ++ GL P+ ++Y L
Sbjct: 396 HEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTL 455
Query: 278 INAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRC 337
+ + ++ + A +F+EM+ GV P+ Y ILLD +G +++A +F+ M++ R
Sbjct: 456 VLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRM 515
Query: 338 SPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMME 397
+ I Y ++ NAS ++ A F L G P+V+TY +I G K +L +
Sbjct: 516 TLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADM 575
Query: 398 IYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSL 455
++ KM+ +G P+ + ++ A+ S+V +EM+ CGF D +++ +
Sbjct: 576 LFRKMKEDGCTPDDFTYNILIRAHLGGSGLISSVELIEEMKVCGFSADSSTIKMVIDM 633
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 93/399 (23%), Positives = 190/399 (47%), Gaps = 9/399 (2%)
Query: 89 QSW---WDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGG 145
++W ++ + + F L+ + +G ++A ++ M + P +V+ + L+ G
Sbjct: 159 RAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKG 218
Query: 146 RYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQK 205
R A + RM G +P +TY +L ++ A ++F + E+ +K
Sbjct: 219 RVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKM---EERNIKASVV 275
Query: 206 MFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETN---YKEVSKIYDQM 262
+ ++I K G ++ A LF M +G++ VTY+SL+ N + + +K+ +M
Sbjct: 276 QYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREM 335
Query: 263 QRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMV 322
+ PDVV+++ LI+ + K + EA ++ EM+ G+ P YN L+D F +
Sbjct: 336 IGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCL 395
Query: 323 DQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTL 382
+A +F M C PDI +Y+ ++++Y A ++ + FR + G +PN ITY TL
Sbjct: 396 HEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTL 455
Query: 383 IKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGF 442
+ G+ + L E++ +M G+ P+ + ++D N + + A+ +++M+
Sbjct: 456 VLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRM 515
Query: 443 PPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGI 481
NI++ A + ++A L + + +P +
Sbjct: 516 TLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDV 554
Score = 132 bits (333), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 100/462 (21%), Positives = 206/462 (44%), Gaps = 11/462 (2%)
Query: 33 RLMNQIEEVGSAVAV-LRSERTRGQPLPKDLVLGTLVR-LKQLKKWNVVSEVLEWLRIQS 90
RL N I ++ A+ L + +PLP + L + + K++++V + + +
Sbjct: 70 RLRNGIVDIKVNDAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNG 129
Query: 91 WWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNA 150
+ + ++I Y ++ A VL K GY P ++ + L+ + GR A
Sbjct: 130 I-EHDMYTMTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEA 188
Query: 151 EAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEE-KSPLKPDQKMFHM 209
A+ RM RP +T ++ + EA + L+D + +PD+ +
Sbjct: 189 VALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEA----LVLIDRMVEYGFQPDEVTYGP 244
Query: 210 MIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSL---MSFETNYKEVSKIYDQMQRAG 266
++ K+G A LF M ER ++ S V Y+ + + + ++ + ++++M+ G
Sbjct: 245 VLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKG 304
Query: 267 LQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQAR 326
++ DVV+Y+ LI + ++ + EM+ + P ++ L+D F G + +A+
Sbjct: 305 IKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAK 364
Query: 327 TVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGY 386
++ M +PD +Y +++ + + + A + F + G P+++TY LI Y
Sbjct: 365 ELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSY 424
Query: 387 AKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQ 446
K ++ M ++ ++ G+ PN + T++ + ++ ++A ++EM S G PP
Sbjct: 425 CKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSV 484
Query: 447 KAKNILLSLAKTADERNEANELLGNFNHPNNEPGINGLSISV 488
ILL E N+A E+ GI +I +
Sbjct: 485 VTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIII 526
Score = 115 bits (287), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 88/410 (21%), Positives = 176/410 (42%), Gaps = 6/410 (1%)
Query: 88 IQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRY 147
IQS +DF L +A + ++ M G + + T ++ Y R +
Sbjct: 91 IQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMTIMINCYCRKKKL 150
Query: 148 KNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMF 207
A ++ R G P +T+ ++ F + EA + +++ ++ +PD
Sbjct: 151 LFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQ---RPDLVTV 207
Query: 208 HMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSF---ETNYKEVSKIYDQMQR 264
+I G +A L M E G Q VTY +++ N ++ +M+
Sbjct: 208 STLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEE 267
Query: 265 AGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQ 324
++ VV Y+++I++ K ++AL++F EM G++ Y+ L+ G D
Sbjct: 268 RNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDD 327
Query: 325 ARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIK 384
+ + M PD+ +++ ++ +V + A++ + + G P+ ITY +LI
Sbjct: 328 GAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLID 387
Query: 385 GYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPP 444
G+ K N L + +++D M G +P+ ++ ++++Y K K D + ++E+ S G P
Sbjct: 388 GFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIP 447
Query: 445 DQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGINGLSISVDEEDDD 494
+ N L+ + + N A EL P + I +D D+
Sbjct: 448 NTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDN 497
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 89/200 (44%), Gaps = 6/200 (3%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + + L+ + + G N A+++ M +G PSVV++ L++ G A IF
Sbjct: 448 NTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIF 507
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
+MQ S Y II+ A+K +A +F +L D+ +KPD +++MI
Sbjct: 508 EKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDK---GVKPDVVTYNVMIGGL 564
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFE---TNYKEVSKIYDQMQRAGLQPDV 271
K G +A LF M E G TYN L+ + ++ ++M+ G D
Sbjct: 565 CKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLISSVELIEEMKVCGFSADS 624
Query: 272 VSYALLINAYGKARREEEAL 291
+ ++I+ R ++ L
Sbjct: 625 STIKMVIDMLSDRRLDKSFL 644
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 46/211 (21%), Positives = 86/211 (40%)
Query: 289 EALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTML 348
+A+ +FE M+ + PT +N L A A + D K M + D+ + T M+
Sbjct: 82 DAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMTIMI 141
Query: 349 SAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIK 408
+ Y + A R + G+ P+ IT+ TL+ G+ + + + + D+M +
Sbjct: 142 NCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQR 201
Query: 409 PNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANEL 468
P+ +T+++ A+V M GF PD+ +L+ + A +L
Sbjct: 202 PDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDL 261
Query: 469 LGNFNHPNNEPGINGLSISVDEEDDDDDDDE 499
N + + SI +D D D+
Sbjct: 262 FRKMEERNIKASVVQYSIVIDSLCKDGSFDD 292
>gi|388499386|gb|AFK37759.1| unknown [Lotus japonicus]
Length = 500
Score = 155 bits (391), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 93/366 (25%), Positives = 187/366 (51%), Gaps = 6/366 (1%)
Query: 61 DLVLGTLVRLKQLKKWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLS 120
D +L V+L+ K+W+ + + W+ ++S + + + + +LI A+G++ + +AE
Sbjct: 127 DDILTVSVQLRMRKQWDSIISICRWILLRSSFKQDVICYNLLIDAFGQKFLYKEAESTYL 186
Query: 121 FMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEAN 180
+ + P+ ++ L++AY G + AEA+F M++ G SA+ Y + ++
Sbjct: 187 QLLEARCIPNEDTYALLIKAYCLSGLLEKAEAVFVEMKNYGLPSSAVVYNSYINGLMKGG 246
Query: 181 KFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTV 240
+AEE+F+ + ++ KP + + M+I +Y K G A K+F M + +
Sbjct: 247 NPNKAEEIFLRM---KRDGCKPSTETYTMLINLYGKDGKSFMALKVFNEMLSHKCKPNIC 303
Query: 241 TYNSLMSF---ETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEM 297
TY +L++ E ++ ++++QMQ AGL+PDV SY L+ AY +A A +F M
Sbjct: 304 TYTALVNAFAREGLCEKAEEVFEQMQEAGLEPDVYSYNALMEAYSRAGFPYGAAEIFSLM 363
Query: 298 LDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDM 357
G P +YNIL+DA+ +G ++ A VF+ M+R +P + S+ +LSA+ ++
Sbjct: 364 QHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNV 423
Query: 358 EGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTI 417
E ++ + G + +++ Y ++ KM E+ M + + + + +
Sbjct: 424 SKCEDILNQMCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNIL 483
Query: 418 MDAYGK 423
++ YG+
Sbjct: 484 INRYGQ 489
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 90/304 (29%), Positives = 148/304 (48%), Gaps = 6/304 (1%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
NE + +LI AY G KAE V M G S V + + + +GG AE IF
Sbjct: 196 NEDTYALLIKAYCLSGLLEKAEAVFVEMKNYGLPSSAVVYNSYINGLMKGGNPNKAEEIF 255
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
RM+ G +PS TY +++ L+ + K A +VF +L + KP+ + ++ +
Sbjct: 256 LRMKRDGCKPSTETYTMLINLYGKDGKSFMALKVFNEMLSHK---CKPNICTYTALVNAF 312
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYK---EVSKIYDQMQRAGLQPDV 271
+ G EKA ++F M E G++ +YN+LM + ++I+ MQ G +PD
Sbjct: 313 AREGLCEKAEEVFEQMQEAGLEPDVYSYNALMEAYSRAGFPYGAAEIFSLMQHMGCEPDR 372
Query: 272 VSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKC 331
SY +L++AYG+A +A AVFE+M G+ PT K++ +LL AF+ +G V + +
Sbjct: 373 ASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKCEDILNQ 432
Query: 332 MRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNN 391
M + D +ML+ Y E+ ++ ++ TY LI Y +
Sbjct: 433 MCKSGLKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENGSCEADISTYNILINRYGQAGF 492
Query: 392 LEKM 395
++KM
Sbjct: 493 IDKM 496
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 88/333 (26%), Positives = 156/333 (46%), Gaps = 6/333 (1%)
Query: 160 SGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGG 219
S + + Y +++ F + +KEAE ++ LL+ + P++ + ++I Y +G
Sbjct: 156 SSFKQDVICYNLLIDAFGQKFLYKEAESTYLQLLE---ARCIPNEDTYALLIKAYCLSGL 212
Query: 220 YEKARKLFALMAERGVQQSTVTYNSLMSFET---NYKEVSKIYDQMQRAGLQPDVVSYAL 276
EKA +F M G+ S V YNS ++ N + +I+ +M+R G +P +Y +
Sbjct: 213 LEKAEAVFVEMKNYGLPSSAVVYNSYINGLMKGGNPNKAEEIFLRMKRDGCKPSTETYTM 272
Query: 277 LINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDR 336
LIN YGK + AL VF EML +P Y L++AFA G+ ++A VF+ M+
Sbjct: 273 LINLYGKDGKSFMALKVFNEMLSHKCKPNICTYTALVNAFAREGLCEKAEEVFEQMQEAG 332
Query: 337 CSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMM 396
PD+ SY ++ AY A GA + F ++ G P+ +Y L+ Y + L
Sbjct: 333 LEPDVYSYNALMEAYSRAGFPYGAAEIFSLMQHMGCEPDRASYNILVDAYGRAGFLNDAE 392
Query: 397 EIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLA 456
+++ M+ GI P ++ A+ K + +M G D N +L+L
Sbjct: 393 AVFEDMKRVGITPTMKSHMVLLSAFSKTGNVSKCEDILNQMCKSGLKLDTFVLNSMLNLY 452
Query: 457 KTADERNEANELLGNFNHPNNEPGINGLSISVD 489
+ + E+L + + E I+ +I ++
Sbjct: 453 GRLGQFGKMEEVLTVMENGSCEADISTYNILIN 485
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 113/228 (49%)
Query: 262 MQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGM 321
+ R+ + DV+ Y LLI+A+G+ +EA + + ++L+A P Y +L+ A+ +SG+
Sbjct: 153 LLRSSFKQDVICYNLLIDAFGQKFLYKEAESTYLQLLEARCIPNEDTYALLIKAYCLSGL 212
Query: 322 VDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGT 381
+++A VF M+ Y + ++ + + AE+ F R+K+DG P+ TY
Sbjct: 213 LEKAEAVFVEMKNYGLPSSAVVYNSYINGLMKGGNPNKAEEIFLRMKRDGCKPSTETYTM 272
Query: 382 LIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCG 441
LI Y K ++++++M + KPN +T +++A+ + + A +++M+ G
Sbjct: 273 LINLYGKDGKSFMALKVFNEMLSHKCKPNICTYTALVNAFAREGLCEKAEEVFEQMQEAG 332
Query: 442 FPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGINGLSISVD 489
PD + N L+ A A E+ H EP +I VD
Sbjct: 333 LEPDVYSYNALMEAYSRAGFPYGAAEIFSLMQHMGCEPDRASYNILVD 380
>gi|226501158|ref|NP_001146427.1| uncharacterized protein LOC100280009 [Zea mays]
gi|219887141|gb|ACL53945.1| unknown [Zea mays]
Length = 522
Score = 155 bits (391), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 95/353 (26%), Positives = 172/353 (48%), Gaps = 6/353 (1%)
Query: 101 MLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSS 160
+L+ K G KAE+VL + G P+ V + L+ Y + + A IF +M+S
Sbjct: 161 ILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTVIYNTLINGYCQVRDLRGAFCIFEQMKSR 220
Query: 161 GPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGY 220
RP +TY ++ + +AE++ M + EKS + P + F+ +I Y AG
Sbjct: 221 HIRPDHITYNALINGLCKLEMVTKAEDLVMEM---EKSGVDPSVETFNTLIDAYGTAGQL 277
Query: 221 EKARKLFALMAERGVQQSTVTYNSLM-SFETNYK--EVSKIYDQMQRAGLQPDVVSYALL 277
EK + + M ++G++ +++ S++ +F N K E I D M + P+ Y +
Sbjct: 278 EKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVYNSI 337
Query: 278 INAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRC 337
I+AY ++ E+A + E+M ++GV + YN+LL S +D+A + +R
Sbjct: 338 IDAYIESGDTEQAFLLVEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEELIYTLRNQGL 397
Query: 338 SPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMME 397
PD+ SY T++SA N D + A + + + + G P + TY TL+ A + M
Sbjct: 398 RPDVVSYNTIISACCNKGDTDKALELLQEMNKYGIRPTLRTYHTLVSALASAGRVHDMEC 457
Query: 398 IYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKN 450
+Y +M ++P+ +I+ ++DAY + ++ KEM G D ++
Sbjct: 458 LYQQMLHKNVEPSSSIYGIMVDAYVRCENDSKVASLKKEMSEKGIAFDDTKRS 510
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 115/486 (23%), Positives = 209/486 (43%), Gaps = 51/486 (10%)
Query: 47 VLRSERTRGQPLPK----DLVLGTLVRL-KQLKKWNVVSEVLEWLRIQSWWDFNEMDFLM 101
V R R+ G P P ++V+ L R K V E+++ + +W +N M
Sbjct: 2 VRRMGRSEGAPPPDAFSYNVVIAGLWRSGKGSDALKVFDEMVDMGVVPNWITYNTM---- 57
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
I + K GD ++ M G P++V++ L+ R GR + M S
Sbjct: 58 -IDGHVKGGDLEAGFRLRDQMLHDGPKPNIVTYNVLLSGLCRAGRMDETRVLMDEMASHS 116
Query: 162 PRPSALTYQII-------------LKLFVEA----------------------NKFKEAE 186
P TY I+ L LF E+ K +AE
Sbjct: 117 MFPDGFTYSILFDGLTRTGESRTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAE 176
Query: 187 EVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLM 246
+V L+ + L P +++ +I Y + A +F M R ++ +TYN+L+
Sbjct: 177 QVLEMLV---HTGLVPTTVIYNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALI 233
Query: 247 SFETNYKEVSKIYD---QMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVR 303
+ + V+K D +M+++G+ P V ++ LI+AYG A + E+ V +M G++
Sbjct: 234 NGLCKLEMVTKAEDLVMEMEKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIK 293
Query: 304 PTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKF 363
++ ++ AF +G + +A + M +P+ Y +++ AY+ + D E A
Sbjct: 294 SDVISFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQAFLL 353
Query: 364 FRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGK 423
++K G +++TY L+KG + + +++ E+ +R G++P+ + TI+ A
Sbjct: 354 VEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEELIYTLRNQGLRPDVVSYNTIISACCN 413
Query: 424 NKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGING 483
D D A+ +EM G P + + L+S +A ++ L H N EP +
Sbjct: 414 KGDTDKALELLQEMNKYGIRPTLRTYHTLVSALASAGRVHDMECLYQQMLHKNVEPSSSI 473
Query: 484 LSISVD 489
I VD
Sbjct: 474 YGIMVD 479
>gi|255561943|ref|XP_002521980.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223538784|gb|EEF40384.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 584
Score = 155 bits (391), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 105/413 (25%), Positives = 193/413 (46%), Gaps = 13/413 (3%)
Query: 71 KQLKKWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPS 130
+ + K V E+LE + +N LI+ + K A +VL M +G+ P
Sbjct: 118 RNIGKATRVMEILERYGKPDVFAYNA-----LISGFIKANQLENANRVLDRMKSRGFLPD 172
Query: 131 VVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFM 190
VV++ ++ ++ G+ A IF + P+ +TY I+ +EA +V M
Sbjct: 173 VVTYNIMIGSFCSRGKLDLALEIFEELLKDNCEPTVITYTIL----IEATILDGGIDVAM 228
Query: 191 TLLDEEKSP-LKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFE 249
LLDE S L+PD ++ +I K +KA +L ++ RG + +TYN L+
Sbjct: 229 KLLDEMLSKGLEPDTLTYNAIIRGMCKEMMVDKAFELLRSLSSRGCKPDIITYNILLRTL 288
Query: 250 TN---YKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTH 306
+ + E K+ +M G +P+VV++++LI + + EEA+ + M + G++P
Sbjct: 289 LSRGKWSEGEKLISEMISIGCKPNVVTHSILIGTLCRDGKVEEAVNLLRSMKEKGLKPDA 348
Query: 307 KAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRR 366
Y+ L+ F G +D A + M D C PDI +Y T+++ + A + F +
Sbjct: 349 YCYDPLIAGFCREGRLDLATEFLEYMISDGCLPDIVNYNTIMAGLCRTGKADQALEVFEK 408
Query: 367 LKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKD 426
L + G PNV +Y TL + + +E+ K+ GI P++ + +++ ++
Sbjct: 409 LDEVGCPPNVSSYNTLFSALWSSGDRYRALEMILKLLNQGIDPDEITYNSLISCLCRDGM 468
Query: 427 FDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEP 479
D A+ +M+S + P+ + NI+L + N+A E+L +P
Sbjct: 469 VDEAIELLVDMQSGRYRPNVVSYNIILLGLCKVNRANDAIEVLAAMTEKGCQP 521
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 92/388 (23%), Positives = 180/388 (46%), Gaps = 7/388 (1%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
LI + + KA +V+ + + G P V ++ AL+ + + + +NA + RM+S G
Sbjct: 110 LIKGFFNSRNIGKATRVMEILERYG-KPDVFAYNALISGFIKANQLENANRVLDRMKSRG 168
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
P +TY I++ F K A E+F LL K +P + ++I GG +
Sbjct: 169 FLPDVVTYNIMIGSFCSRGKLDLALEIFEELL---KDNCEPTVITYTILIEATILDGGID 225
Query: 222 KARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSKIYD---QMQRAGLQPDVVSYALLI 278
A KL M +G++ T+TYN+++ V K ++ + G +PD+++Y +L+
Sbjct: 226 VAMKLLDEMLSKGLEPDTLTYNAIIRGMCKEMMVDKAFELLRSLSSRGCKPDIITYNILL 285
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCS 338
+ E + EM+ G +P ++IL+ G V++A + + M+
Sbjct: 286 RTLLSRGKWSEGEKLISEMISIGCKPNVVTHSILIGTLCRDGKVEEAVNLLRSMKEKGLK 345
Query: 339 PDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEI 398
PD Y +++ + ++ A +F + DG +P+++ Y T++ G + ++ +E+
Sbjct: 346 PDAYCYDPLIAGFCREGRLDLATEFLEYMISDGCLPDIVNYNTIMAGLCRTGKADQALEV 405
Query: 399 YDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKT 458
++K+ G PN + + T+ A + D A+ ++ + G PD+ N L+S
Sbjct: 406 FEKLDEVGCPPNVSSYNTLFSALWSSGDRYRALEMILKLLNQGIDPDEITYNSLISCLCR 465
Query: 459 ADERNEANELLGNFNHPNNEPGINGLSI 486
+EA ELL + P + +I
Sbjct: 466 DGMVDEAIELLVDMQSGRYRPNVVSYNI 493
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 60/237 (25%), Positives = 104/237 (43%), Gaps = 1/237 (0%)
Query: 252 YKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNI 311
Y E + M G PDV+ LI + +R +A V E +L+ +P AYN
Sbjct: 85 YNESLYFLECMVDKGYTPDVILCTKLIKGFFNSRNIGKATRVME-ILERYGKPDVFAYNA 143
Query: 312 LLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDG 371
L+ F + ++ A V M+ PD+ +Y M+ ++ + ++ A + F L +D
Sbjct: 144 LISGFIKANQLENANRVLDRMKSRGFLPDVVTYNIMIGSFCSRGKLDLALEIFEELLKDN 203
Query: 372 FVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAV 431
P VITY LI+ ++ M++ D+M G++P+ + I+ K D A
Sbjct: 204 CEPTVITYTILIEATILDGGIDVAMKLLDEMLSKGLEPDTLTYNAIIRGMCKEMMVDKAF 263
Query: 432 VWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGINGLSISV 488
+ + S G PD NILL + + +E +L+ +P + SI +
Sbjct: 264 ELLRSLSSRGCKPDIITYNILLRTLLSRGKWSEGEKLISEMISIGCKPNVVTHSILI 320
Score = 42.4 bits (98), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 30/127 (23%), Positives = 56/127 (44%), Gaps = 1/127 (0%)
Query: 363 FFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYG 422
F + G+ P+VI LIKG+ N+ K + + + G KP+ + ++ +
Sbjct: 91 FLECMVDKGYTPDVILCTKLIKGFFNSRNIGKATRVMEILERYG-KPDVFAYNALISGFI 149
Query: 423 KNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGIN 482
K ++A M+S GF PD NI++ + + + A E+ N EP +
Sbjct: 150 KANQLENANRVLDRMKSRGFLPDVVTYNIMIGSFCSRGKLDLALEIFEELLKDNCEPTVI 209
Query: 483 GLSISVD 489
+I ++
Sbjct: 210 TYTILIE 216
>gi|19071826|dbj|BAB85657.1| PnC401 homologue [Arabidopsis thaliana]
Length = 831
Score = 155 bits (391), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 102/357 (28%), Positives = 175/357 (49%), Gaps = 10/357 (2%)
Query: 131 VVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFM 190
V S T LM GR + A +IF + G +PS +TY ++ F +
Sbjct: 319 VRSRTKLMNGLIERGRPQEAHSIFNTLIEEGHKPSLITYTTLVTALTRQKHFHS----LL 374
Query: 191 TLLDE-EKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFE 249
+L+ + EK+ LKPD +F+ +I ++G ++A K+F M E G + + T+N+L+
Sbjct: 375 SLISKVEKNGLKPDTILFNAIINASSESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGY 434
Query: 250 ---TNYKEVSKIYDQMQR-AGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPT 305
+E S++ D M R LQP+ + +L+ A+ R+ EEA + +M GV+P
Sbjct: 435 GKIGKLEESSRLLDMMLRDEMLQPNDRTCNILVQAWCNQRKIEEAWNIVYKMQSYGVKPD 494
Query: 306 HKAYNILLDAFAISGMVDQAR-TVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFF 364
+N L A+A G A + M ++ P++ + T+++ Y ME A +FF
Sbjct: 495 VVTFNTLAKAYARIGSTCTAEDMIIPRMLHNKVKPNVRTCGTIVNGYCEEGKMEEALRFF 554
Query: 365 RRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKN 424
R+K+ G PN+ + +LIKG+ +N+++ + E+ D M G+KP+ F+T+M+A+
Sbjct: 555 YRMKELGVHPNLFVFNSLIKGFLNINDMDGVGEVVDLMEEFGVKPDVVTFSTLMNAWSSV 614
Query: 425 KDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGI 481
D Y +M G PD A +IL A E +A ++L P +
Sbjct: 615 GDMKRCEEIYTDMLEGGIDPDIHAFSILAKGYARAGEPEKAKQILNQMRKFGVRPNV 671
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 115/467 (24%), Positives = 214/467 (45%), Gaps = 22/467 (4%)
Query: 18 VFKDAADEAGKKNWRRLMNQIEEVGSAVAVLRSERTRGQPLPKDLVLGTLVRLKQLKKWN 77
VFKD+ E G+ R I G+ +RS RT+ L+ G + R + + +
Sbjct: 291 VFKDS--EEGRVQLRSFPCVICSGGTTCGDVRS-RTK-------LMNGLIERGRPQEAHS 340
Query: 78 VVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTAL 137
+ + ++E S + + L+TA +Q F+ ++S + K G P + A+
Sbjct: 341 IFNTLIEEGHKPSL-----ITYTTLVTALTRQKHFHSLLSLISKVEKNGLKPDTILFNAI 395
Query: 138 MEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEK 197
+ A G A IF +M+ SG +P+A T+ ++K + + K +E+ + +L +E
Sbjct: 396 INASSESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYGKIGKLEESSRLLDMMLRDEM 455
Query: 198 SPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSK 257
L+P+ + ++++ + E+A + M GV+ VT+N+L
Sbjct: 456 --LQPNDRTCNILVQAWCNQRKIEEAWNIVYKMQSYGVKPDVVTFNTLAKAYARIGSTCT 513
Query: 258 ----IYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILL 313
I +M ++P+V + ++N Y + + EEAL F M + GV P +N L+
Sbjct: 514 AEDMIIPRMLHNKVKPNVRTCGTIVNGYCEEGKMEEALRFFYRMKELGVHPNLFVFNSLI 573
Query: 314 DAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFV 373
F +D V M PD+ +++T+++A+ + DM+ E+ + + + G
Sbjct: 574 KGFLNINDMDGVGEVVDLMEEFGVKPDVVTFSTLMNAWSSVGDMKRCEEIYTDMLEGGID 633
Query: 374 PNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVW 433
P++ + L KGYA+ EK +I ++MR G++PN I+T I+ + + A+
Sbjct: 634 PDIHAFSILAKGYARAGEPEKAKQILNQMRKFGVRPNVVIYTQIISGWCSAGEMKKAMQV 693
Query: 434 YKEMES-CGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEP 479
YK+M G P+ L+ A + +A ELL + N P
Sbjct: 694 YKKMCGIVGLSPNLTTYETLIWGFGEAKQPWKAEELLKDMEGKNVVP 740
Score = 135 bits (339), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 88/331 (26%), Positives = 168/331 (50%), Gaps = 13/331 (3%)
Query: 99 FLMLITAYGKQGDFNKAEKVLSFMNK-KGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRM 157
F LI YGK G ++ ++L M + + P+ + L++A+ + + A I +M
Sbjct: 427 FNTLIKGYGKIGKLEESSRLLDMMLRDEMLQPNDRTCNILVQAWCNQRKIEEAWNIVYKM 486
Query: 158 QSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKA 217
QS G +P +T+ + K + AE++ + + K +KP+ + ++ Y +
Sbjct: 487 QSYGVKPDVVTFNTLAKAYARIGSTCTAEDMIIPRMLHNK--VKPNVRTCGTIVNGYCEE 544
Query: 218 GGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKE---VSKIYDQMQRAGLQPDVVSY 274
G E+A + F M E GV + +NSL+ N + V ++ D M+ G++PDVV++
Sbjct: 545 GKMEEALRFFYRMKELGVHPNLFVFNSLIKGFLNINDMDGVGEVVDLMEEFGVKPDVVTF 604
Query: 275 ALLINAY---GKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKC 331
+ L+NA+ G +R EE ++ +ML+ G+ P A++IL +A +G ++A+ +
Sbjct: 605 STLMNAWSSVGDMKRCEE---IYTDMLEGGIDPDIHAFSILAKGYARAGEPEKAKQILNQ 661
Query: 332 MRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQD-GFVPNVITYGTLIKGYAKVN 390
MR+ P++ YT ++S + +A +M+ A + ++++ G PN+ TY TLI G+ +
Sbjct: 662 MRKFGVRPNVVIYTQIISGWCSAGEMKKAMQVYKKMCGIVGLSPNLTTYETLIWGFGEAK 721
Query: 391 NLEKMMEIYDKMRVNGIKPNQTIFTTIMDAY 421
K E+ M + P + I D +
Sbjct: 722 QPWKAEELLKDMEGKNVVPTRKTMQLIADGW 752
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/224 (22%), Positives = 106/224 (47%), Gaps = 7/224 (3%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
++ Y ++G +A + M + G P++ +L++ + + M+ G
Sbjct: 537 IVNGYCEEGKMEEALRFFYRMKELGVHPNLFVFNSLIKGFLNINDMDGVGEVVDLMEEFG 596
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
+P +T+ ++ + K EE++ +L+ + PD F ++ Y +AG E
Sbjct: 597 VKPDVVTFSTLMNAWSSVGDMKRCEEIYTDMLE---GGIDPDIHAFSILAKGYARAGEPE 653
Query: 222 KARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSK---IYDQMQR-AGLQPDVVSYALL 277
KA+++ M + GV+ + V Y ++S + E+ K +Y +M GL P++ +Y L
Sbjct: 654 KAKQILNQMRKFGVRPNVVIYTQIISGWCSAGEMKKAMQVYKKMCGIVGLSPNLTTYETL 713
Query: 278 INAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGM 321
I +G+A++ +A + ++M V PT K ++ D + G+
Sbjct: 714 IWGFGEAKQPWKAEELLKDMEGKNVVPTRKTMQLIADGWKSIGV 757
>gi|29294052|gb|AAO73889.1| protein kinase family [Arabidopsis thaliana]
Length = 854
Score = 155 bits (391), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 102/357 (28%), Positives = 175/357 (49%), Gaps = 10/357 (2%)
Query: 131 VVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFM 190
V S T LM GR + A +IF + G +PS +TY ++ F +
Sbjct: 342 VRSRTKLMNGLIERGRPQEAHSIFNTLIEEGHKPSLITYTTLVTALTRQKHFHS----LL 397
Query: 191 TLLDE-EKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFE 249
+L+ + EK+ LKPD +F+ +I ++G ++A K+F M E G + + T+N+L+
Sbjct: 398 SLISKVEKNGLKPDTILFNAIINASSESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGY 457
Query: 250 ---TNYKEVSKIYDQMQR-AGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPT 305
+E S++ D M R LQP+ + +L+ A+ R+ EEA + +M GV+P
Sbjct: 458 GKIGKLEESSRLLDMMLRDEMLQPNDRTCNILVQAWCNQRKIEEAWNIVYKMQSYGVKPD 517
Query: 306 HKAYNILLDAFAISGMVDQAR-TVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFF 364
+N L A+A G A + M ++ P++ + T+++ Y ME A +FF
Sbjct: 518 VVTFNTLAKAYARIGSTCTAEDMIIPRMLHNKVKPNVRTCGTIVNGYCEEGKMEEALRFF 577
Query: 365 RRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKN 424
R+K+ G PN+ + +LIKG+ +N+++ + E+ D M G+KP+ F+T+M+A+
Sbjct: 578 YRMKELGVHPNLFVFNSLIKGFLNINDMDGVGEVVDLMEEFGVKPDVVTFSTLMNAWSSV 637
Query: 425 KDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGI 481
D Y +M G PD A +IL A E +A ++L P +
Sbjct: 638 GDMKRCEEIYTDMLEGGIDPDIHAFSILAKGYARAGEPEKAEQILNQMRKFGVRPNV 694
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 115/467 (24%), Positives = 214/467 (45%), Gaps = 22/467 (4%)
Query: 18 VFKDAADEAGKKNWRRLMNQIEEVGSAVAVLRSERTRGQPLPKDLVLGTLVRLKQLKKWN 77
VFKD+ E G+ R I G+ +RS RT+ L+ G + R + + +
Sbjct: 314 VFKDS--EEGRVQLRSFPCVICSGGTTCGDVRS-RTK-------LMNGLIERGRPQEAHS 363
Query: 78 VVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTAL 137
+ + ++E S + + L+TA +Q F+ ++S + K G P + A+
Sbjct: 364 IFNTLIEEGHKPSL-----ITYTTLVTALTRQKHFHSLLSLISKVEKNGLKPDTILFNAI 418
Query: 138 MEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEK 197
+ A G A IF +M+ SG +P+A T+ ++K + + K +E+ + +L +E
Sbjct: 419 INASSESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYGKIGKLEESSRLLDMMLRDEM 478
Query: 198 SPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSK 257
L+P+ + ++++ + E+A + M GV+ VT+N+L
Sbjct: 479 --LQPNDRTCNILVQAWCNQRKIEEAWNIVYKMQSYGVKPDVVTFNTLAKAYARIGSTCT 536
Query: 258 ----IYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILL 313
I +M ++P+V + ++N Y + + EEAL F M + GV P +N L+
Sbjct: 537 AEDMIIPRMLHNKVKPNVRTCGTIVNGYCEEGKMEEALRFFYRMKELGVHPNLFVFNSLI 596
Query: 314 DAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFV 373
F +D V M PD+ +++T+++A+ + DM+ E+ + + + G
Sbjct: 597 KGFLNINDMDGVGEVVDLMEEFGVKPDVVTFSTLMNAWSSVGDMKRCEEIYTDMLEGGID 656
Query: 374 PNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVW 433
P++ + L KGYA+ EK +I ++MR G++PN I+T I+ + + A+
Sbjct: 657 PDIHAFSILAKGYARAGEPEKAEQILNQMRKFGVRPNVVIYTQIISGWCSAGEMKKAMQV 716
Query: 434 YKEMES-CGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEP 479
YK+M G P+ L+ A + +A ELL + N P
Sbjct: 717 YKKMCGIVGLSPNLTTYETLIWGFGEAKQPWKAEELLKDMEGKNVVP 763
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 88/331 (26%), Positives = 167/331 (50%), Gaps = 13/331 (3%)
Query: 99 FLMLITAYGKQGDFNKAEKVLSFMNK-KGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRM 157
F LI YGK G ++ ++L M + + P+ + L++A+ + + A I +M
Sbjct: 450 FNTLIKGYGKIGKLEESSRLLDMMLRDEMLQPNDRTCNILVQAWCNQRKIEEAWNIVYKM 509
Query: 158 QSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKA 217
QS G +P +T+ + K + AE++ + + K +KP+ + ++ Y +
Sbjct: 510 QSYGVKPDVVTFNTLAKAYARIGSTCTAEDMIIPRMLHNK--VKPNVRTCGTIVNGYCEE 567
Query: 218 GGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKE---VSKIYDQMQRAGLQPDVVSY 274
G E+A + F M E GV + +NSL+ N + V ++ D M+ G++PDVV++
Sbjct: 568 GKMEEALRFFYRMKELGVHPNLFVFNSLIKGFLNINDMDGVGEVVDLMEEFGVKPDVVTF 627
Query: 275 ALLINAY---GKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKC 331
+ L+NA+ G +R EE ++ +ML+ G+ P A++IL +A +G ++A +
Sbjct: 628 STLMNAWSSVGDMKRCEE---IYTDMLEGGIDPDIHAFSILAKGYARAGEPEKAEQILNQ 684
Query: 332 MRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQD-GFVPNVITYGTLIKGYAKVN 390
MR+ P++ YT ++S + +A +M+ A + ++++ G PN+ TY TLI G+ +
Sbjct: 685 MRKFGVRPNVVIYTQIISGWCSAGEMKKAMQVYKKMCGIVGLSPNLTTYETLIWGFGEAK 744
Query: 391 NLEKMMEIYDKMRVNGIKPNQTIFTTIMDAY 421
K E+ M + P + I D +
Sbjct: 745 QPWKAEELLKDMEGKNVVPTRKTMQLIADGW 775
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/224 (22%), Positives = 105/224 (46%), Gaps = 7/224 (3%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
++ Y ++G +A + M + G P++ +L++ + + M+ G
Sbjct: 560 IVNGYCEEGKMEEALRFFYRMKELGVHPNLFVFNSLIKGFLNINDMDGVGEVVDLMEEFG 619
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
+P +T+ ++ + K EE++ +L+ + PD F ++ Y +AG E
Sbjct: 620 VKPDVVTFSTLMNAWSSVGDMKRCEEIYTDMLE---GGIDPDIHAFSILAKGYARAGEPE 676
Query: 222 KARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSK---IYDQMQR-AGLQPDVVSYALL 277
KA ++ M + GV+ + V Y ++S + E+ K +Y +M GL P++ +Y L
Sbjct: 677 KAEQILNQMRKFGVRPNVVIYTQIISGWCSAGEMKKAMQVYKKMCGIVGLSPNLTTYETL 736
Query: 278 INAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGM 321
I +G+A++ +A + ++M V PT K ++ D + G+
Sbjct: 737 IWGFGEAKQPWKAEELLKDMEGKNVVPTRKTMQLIADGWKSIGV 780
>gi|413920484|gb|AFW60416.1| hypothetical protein ZEAMMB73_230014 [Zea mays]
Length = 700
Score = 155 bits (391), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 95/353 (26%), Positives = 172/353 (48%), Gaps = 6/353 (1%)
Query: 101 MLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSS 160
+L+ K G KAE+VL + G P+ V + L+ Y + + A IF +M+S
Sbjct: 339 ILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTVIYNTLINGYCQVRDLRGAFCIFEQMKSR 398
Query: 161 GPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGY 220
RP +TY ++ + +AE++ M + EKS + P + F+ +I Y AG
Sbjct: 399 HIRPDHITYNALINGLCKLEMVTKAEDLVMEM---EKSGVDPSVETFNTLIDAYGTAGQL 455
Query: 221 EKARKLFALMAERGVQQSTVTYNSLM-SFETNYK--EVSKIYDQMQRAGLQPDVVSYALL 277
EK + + M ++G++ +++ S++ +F N K E I D M + P+ Y +
Sbjct: 456 EKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVYNSI 515
Query: 278 INAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRC 337
I+AY ++ E+A + E+M ++GV + YN+LL S +D+A + +R
Sbjct: 516 IDAYIESGDTEQAFLLVEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEELIYTLRNQGL 575
Query: 338 SPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMME 397
PD+ SY T++SA N D + A + + + + G P + TY TL+ A + M
Sbjct: 576 RPDVVSYNTIISACCNKGDTDKALELLQEMNKYGIRPTLRTYHTLVSALASAGRVHDMEC 635
Query: 398 IYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKN 450
+Y +M ++P+ +I+ ++DAY + ++ KEM G D ++
Sbjct: 636 LYQQMLHKNVEPSSSIYGIMVDAYVRCENDSKVASLKKEMSEKGIAFDDTKRS 688
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 117/506 (23%), Positives = 215/506 (42%), Gaps = 55/506 (10%)
Query: 31 WRRLMNQIEEVG----SAVAVLRSERTRGQPLPK----DLVLGTLVRL-KQLKKWNVVSE 81
W +++ G + V R R+ G P P ++V+ L R K V E
Sbjct: 160 WNKVVQACVAAGDLDVALAMVRRMGRSEGAPPPDAFSYNVVIAGLWRSGKGSDALKVFDE 219
Query: 82 VLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAY 141
+++ + +W +N M I + K GD ++ M G P++V++ L+
Sbjct: 220 MVDMGVVPNWITYNTM-----IDGHVKGGDLEAGFRLRDQMLHDGPKPNIVTYNVLLSGL 274
Query: 142 GRGGRYKNAEAIFRRMQSSGPRPSALTYQII-------------LKLFVEA--------- 179
R GR + M S P TY I+ L LF E+
Sbjct: 275 CRAGRMDETRVLMDEMASHSMFPDGFTYSILFDGLTRTGESRTMLSLFAESLKKGVMLGA 334
Query: 180 -------------NKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKL 226
K +AE+V L+ + L P +++ +I Y + A +
Sbjct: 335 YTCSILLNGLCKDGKVAKAEQVLEMLV---HTGLVPTTVIYNTLINGYCQVRDLRGAFCI 391
Query: 227 FALMAERGVQQSTVTYNSLMSFETNYKEVSKIYD---QMQRAGLQPDVVSYALLINAYGK 283
F M R ++ +TYN+L++ + V+K D +M+++G+ P V ++ LI+AYG
Sbjct: 392 FEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEMEKSGVDPSVETFNTLIDAYGT 451
Query: 284 ARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICS 343
A + E+ V +M G++ ++ ++ AF +G + +A + M +P+
Sbjct: 452 AGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQV 511
Query: 344 YTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMR 403
Y +++ AY+ + D E A ++K G +++TY L+KG + + +++ E+ +R
Sbjct: 512 YNSIIDAYIESGDTEQAFLLVEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEELIYTLR 571
Query: 404 VNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERN 463
G++P+ + TI+ A D D A+ +EM G P + + L+S +A +
Sbjct: 572 NQGLRPDVVSYNTIISACCNKGDTDKALELLQEMNKYGIRPTLRTYHTLVSALASAGRVH 631
Query: 464 EANELLGNFNHPNNEPGINGLSISVD 489
+ L H N EP + I VD
Sbjct: 632 DMECLYQQMLHKNVEPSSSIYGIMVD 657
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 86/358 (24%), Positives = 158/358 (44%), Gaps = 22/358 (6%)
Query: 129 PSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEV 188
PS+ S L+E+ GR+ + A F + ++G RP + +++ V A A +
Sbjct: 120 PSLSSCNLLLESLLFVGRHADVRAAFGLLVAAGARPDTFAWNKVVQACVAAGDLDVALAM 179
Query: 189 FMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSF 248
+ E +P PD ++++I ++G A K+F M + GV + +TYN+++
Sbjct: 180 VRRMGRSEGAP-PPDAFSYNVVIAGLWRSGKGSDALKVFDEMVDMGVVPNWITYNTMIDG 238
Query: 249 ETNYKEVS---KIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPT 305
++ ++ DQM G +P++V+Y +L++ +A R +E + +EM + P
Sbjct: 239 HVKGGDLEAGFRLRDQMLHDGPKPNIVTYNVLLSGLCRAGRMDETRVLMDEMASHSMFPD 298
Query: 306 HKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEG------ 359
Y+IL D +G ++RT+ ML AY + + G
Sbjct: 299 GFTYSILFDGLTRTG---ESRTMLSLFAESL------KKGVMLGAYTCSILLNGLCKDGK 349
Query: 360 ---AEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTT 416
AE+ L G VP + Y TLI GY +V +L I+++M+ I+P+ +
Sbjct: 350 VAKAEQVLEMLVHTGLVPTTVIYNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNA 409
Query: 417 IMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNH 474
+++ K + A EME G P + N L+ TA + + +L +
Sbjct: 410 LINGLCKLEMVTKAEDLVMEMEKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQ 467
>gi|297836911|ref|XP_002886337.1| F1N19.15 [Arabidopsis lyrata subsp. lyrata]
gi|297332178|gb|EFH62596.1| F1N19.15 [Arabidopsis lyrata subsp. lyrata]
Length = 1059
Score = 154 bits (390), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 95/373 (25%), Positives = 181/373 (48%), Gaps = 8/373 (2%)
Query: 97 MDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRR 156
+DF ++TA K F+ + M G + + S T L+ + R R+ A A+ +
Sbjct: 616 VDFTRVLTAIAKMNKFDIVIYLFHKMENLGISHDLYSFTILIHCFCRCSRFSLALALLGK 675
Query: 157 MQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDE-EKSPLKPDQKMFHMMIYMYK 215
M G +PS +T +L F + N+F+EA ++L+D + L+P+ +++ +I
Sbjct: 676 MMKLGFQPSIVTLGSLLNGFCQGNRFQEA----VSLVDSMAELGLEPNVVIYNTVINGLC 731
Query: 216 KAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETN---YKEVSKIYDQMQRAGLQPDVV 272
K A ++F M ++G+ VTYN+L+S N + + +++ M + + P+V+
Sbjct: 732 KNRDLNNALEIFYGMEKKGIVADAVTYNTLISGLCNSGRWTDAARLLRDMVKRKIDPNVI 791
Query: 273 SYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCM 332
+ LI+ + K EA +++EM+ V P YN L++ F I G + A+ +F M
Sbjct: 792 FFTALIDTFVKEGNLLEAKNLYKEMIRRSVHPNILTYNSLINGFCIQGRLGDAKHMFDLM 851
Query: 333 RRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNL 392
C PD+ +Y T+++ + + +E K F + G V + TY TLI GY + L
Sbjct: 852 VSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTHQGLVGDAFTYNTLIHGYCQAGKL 911
Query: 393 EKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNIL 452
+++++M G+ P+ + ++D N + A+V ++++ D NI+
Sbjct: 912 NVAQKVFNRMVDCGVPPDIVTYNILLDCLCNNGKIEKALVMVEDLQKNQMDVDIITYNII 971
Query: 453 LSLAKTADERNEA 465
+ D+ EA
Sbjct: 972 IQGMCRNDKVKEA 984
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 100/380 (26%), Positives = 185/380 (48%), Gaps = 13/380 (3%)
Query: 97 MDFLMLITAYGKQGDFNKAEKVLSF---MNKKGYAPSVVSHTALMEAYGRGGRYKNAEAI 153
+DF L+TA + + E V+ F M G + + S T L+ + R R A +I
Sbjct: 66 VDFTRLLTAIA---NLRRYETVIYFSQQMELFGISHDLYSFTILIHCFCRCSRLSLALSI 122
Query: 154 FRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYM 213
+M G PS +T+ +L F N+ +A + +++ KS +P+ +++ +I
Sbjct: 123 LGKMMKLGYDPSIVTFGSLLHGFCLRNRIHDAFSLVASMV---KSGYEPNVVVYNTLIDC 179
Query: 214 YKKAGGYEKARKLFALMAERG-VQQSTVTYNSLMS---FETNYKEVSKIYDQMQRAGLQP 269
K G A +L M ++G + VTYN+L++ + +++ ++I M + + P
Sbjct: 180 LCKNGDVNIALELLNEMEKKGRLAADLVTYNTLLTGLCYSGEWRQAARILRDMTKRRINP 239
Query: 270 DVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVF 329
DV ++ LI+A+ K +EA ++++ML + + P YN L++ + G + A+ F
Sbjct: 240 DVFTFTALIDAFVKQGNLDEAQELYKQMLQSSIGPNTVTYNSLINGLCMHGRLYHAKKTF 299
Query: 330 KCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKV 389
M C P++ +Y T+++ + + +E K F+R+ ++G V + TY TLI GY +V
Sbjct: 300 DLMASKGCFPNVVTYNTLINGFCKSRRVEDGMKLFQRMYREGLVGDTFTYNTLIHGYCQV 359
Query: 390 NNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAK 449
L +I+ M G+ P+ ++ N + SA+V + +M S A
Sbjct: 360 GKLRVAKDIFSWMVSCGVTPDIITHCILLHGLCVNGEIGSAMVKFNDMRSGEKYLGIVAY 419
Query: 450 NILLSLAKTADERNEANELL 469
NI++ AD+ EA EL
Sbjct: 420 NIMIHGLCKADKVEEAWELF 439
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 102/424 (24%), Positives = 180/424 (42%), Gaps = 64/424 (15%)
Query: 51 ERTRGQPLPKDL----VLGTLVRLKQLKKWNVVSEVLEWLRIQSWWDFNEMDFLMLITAY 106
E + QPLP + +L + L++ + S+ +E I + F +LI +
Sbjct: 55 EMVQSQPLPSVVDFTRLLTAIANLRRYETVIYFSQQMELFGISH----DLYSFTILIHCF 110
Query: 107 GKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSA 166
+ + A +L M K GY PS+V+ +L+ + R +A ++ M SG P+
Sbjct: 111 CRCSRLSLALSILGKMMKLGYDPSIVTFGSLLHGFCLRNRIHDAFSLVASMVKSGYEPNV 170
Query: 167 LTYQIILKLFVEANKFKEAEEV----------------FMTLL----------------- 193
+ Y ++ + A E+ + TLL
Sbjct: 171 VVYNTLIDCLCKNGDVNIALELLNEMEKKGRLAADLVTYNTLLTGLCYSGEWRQAARILR 230
Query: 194 DEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSL---MSFET 250
D K + PD F +I + K G ++A++L+ M + + +TVTYNSL +
Sbjct: 231 DMTKRRINPDVFTFTALIDAFVKQGNLDEAQELYKQMLQSSIGPNTVTYNSLINGLCMHG 290
Query: 251 NYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYN 310
K +D M G P+VV+Y LIN + K+RR E+ + +F+ M G+ YN
Sbjct: 291 RLYHAKKTFDLMASKGCFPNVVTYNTLINGFCKSRRVEDGMKLFQRMYREGLVGDTFTYN 350
Query: 311 ILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTML----------SAYVNASDMEGA 360
L+ + G + A+ +F M +PDI ++ +L SA V +DM
Sbjct: 351 TLIHGYCQVGKLRVAKDIFSWMVSCGVTPDIITHCILLHGLCVNGEIGSAMVKFNDMRSG 410
Query: 361 EKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDA 420
EK+ ++ Y +I G K + +E+ E++ ++ V G+KP+ +T ++
Sbjct: 411 EKYL----------GIVAYNIMIHGLCKADKVEEAWELFCRLPVEGVKPDARTYTIMILG 460
Query: 421 YGKN 424
KN
Sbjct: 461 LCKN 464
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 94/426 (22%), Positives = 193/426 (45%), Gaps = 10/426 (2%)
Query: 48 LRSERTRGQPLPKDL-VLGTLVRLKQLKKWNVVSEVLEWLRIQSWWDFNEM-DFLMLITA 105
L E + +P+P + L + ++ K+++V + ++++ +++ F +LI
Sbjct: 602 LFCEMLQSRPIPSIVDFTRVLTAIAKMNKFDIVIYLFH--KMENLGISHDLYSFTILIHC 659
Query: 106 YGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPS 165
+ + F+ A +L M K G+ PS+V+ +L+ + +G R++ A ++ M G P+
Sbjct: 660 FCRCSRFSLALALLGKMMKLGFQPSIVTLGSLLNGFCQGNRFQEAVSLVDSMAELGLEPN 719
Query: 166 ALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARK 225
+ Y ++ + A E+F + EK + D ++ +I +G + A +
Sbjct: 720 VVIYNTVINGLCKNRDLNNALEIFYGM---EKKGIVADAVTYNTLISGLCNSGRWTDAAR 776
Query: 226 LFALMAERGVQQSTVTYNSLM-SF--ETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYG 282
L M +R + + + + +L+ +F E N E +Y +M R + P++++Y LIN +
Sbjct: 777 LLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEAKNLYKEMIRRSVHPNILTYNSLINGFC 836
Query: 283 KARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDIC 342
R +A +F+ M+ G P YN L+ F S V+ +F M D
Sbjct: 837 IQGRLGDAKHMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTHQGLVGDAF 896
Query: 343 SYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKM 402
+Y T++ Y A + A+K F R+ G P+++TY L+ +EK + + + +
Sbjct: 897 TYNTLIHGYCQAGKLNVAQKVFNRMVDCGVPPDIVTYNILLDCLCNNGKIEKALVMVEDL 956
Query: 403 RVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADER 462
+ N + + + I+ +N A ++ + G D A ++S R
Sbjct: 957 QKNQMDVDIITYNIIIQGMCRNDKVKEAWCLFRSLTRKGVKLDAIAYITMISGLCRNGLR 1016
Query: 463 NEANEL 468
EA++L
Sbjct: 1017 READKL 1022
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 82/324 (25%), Positives = 153/324 (47%), Gaps = 7/324 (2%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
+I K D N A ++ M KKG V++ L+ GR+ +A + R M
Sbjct: 726 VINGLCKNRDLNNALEIFYGMEKKGIVADAVTYNTLISGLCNSGRWTDAARLLRDMVKRK 785
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
P+ + + ++ FV+ EA+ ++ ++ + + P+ ++ +I + G
Sbjct: 786 IDPNVIFFTALIDTFVKEGNLLEAKNLYKEMI---RRSVHPNILTYNSLINGFCIQGRLG 842
Query: 222 KARKLFALMAERGVQQSTVTYNSLMSFETNYKEVS---KIYDQMQRAGLQPDVVSYALLI 278
A+ +F LM +G VTYN+L++ K V K++ +M GL D +Y LI
Sbjct: 843 DAKHMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTHQGLVGDAFTYNTLI 902
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCS 338
+ Y +A + A VF M+D GV P YNILLD +G +++A + + +++++
Sbjct: 903 HGYCQAGKLNVAQKVFNRMVDCGVPPDIVTYNILLDCLCNNGKIEKALVMVEDLQKNQMD 962
Query: 339 PDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEI 398
DI +Y ++ ++ A FR L + G + I Y T+I G + + ++
Sbjct: 963 VDIITYNIIIQGMCRNDKVKEAWCLFRSLTRKGVKLDAIAYITMISGLCRNGLRREADKL 1022
Query: 399 YDKMRVNGIKPNQTIF-TTIMDAY 421
+M+ +G P++ I+ T+ D Y
Sbjct: 1023 CTRMKEDGFMPSERIYDETLRDHY 1046
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 83/347 (23%), Positives = 150/347 (43%), Gaps = 6/347 (1%)
Query: 146 RYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQK 205
++ +A +F M S P PS + + +L + NKF +F + E + D
Sbjct: 595 KFDDAFGLFCEMLQSRPIPSIVDFTRVLTAIAKMNKFDIVIYLFHKM---ENLGISHDLY 651
Query: 206 MFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETN---YKEVSKIYDQM 262
F ++I+ + + + A L M + G Q S VT SL++ ++E + D M
Sbjct: 652 SFTILIHCFCRCSRFSLALALLGKMMKLGFQPSIVTLGSLLNGFCQGNRFQEAVSLVDSM 711
Query: 263 QRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMV 322
GL+P+VV Y +IN K R AL +F M G+ YN L+ SG
Sbjct: 712 AELGLEPNVVIYNTVINGLCKNRDLNNALEIFYGMEKKGIVADAVTYNTLISGLCNSGRW 771
Query: 323 DQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTL 382
A + + M + + P++ +T ++ +V ++ A+ ++ + + PN++TY +L
Sbjct: 772 TDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEAKNLYKEMIRRSVHPNILTYNSL 831
Query: 383 IKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGF 442
I G+ L ++D M G P+ + T++ + K+K + + + EM G
Sbjct: 832 INGFCIQGRLGDAKHMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTHQGL 891
Query: 443 PPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGINGLSISVD 489
D N L+ A + N A ++ P I +I +D
Sbjct: 892 VGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVPPDIVTYNILLD 938
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 93/378 (24%), Positives = 165/378 (43%), Gaps = 46/378 (12%)
Query: 34 LMNQIEEVGSAVAVLRSERTRGQPLPKDLVLGTLV-RLKQLKKWNVVSEVLEWLRIQSWW 92
L N+I + S VA + + P +V TL+ L + N+ E+L + +
Sbjct: 147 LRNRIHDAFSLVASM----VKSGYEPNVVVYNTLIDCLCKNGDVNIALELLNEMEKKGRL 202
Query: 93 DFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEA 152
+ + + L+T G++ +A ++L M K+ P V + TAL++A+ + G A+
Sbjct: 203 AADLVTYNTLLTGLCYSGEWRQAARILRDMTKRRINPDVFTFTALIDAFVKQGNLDEAQE 262
Query: 153 IFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIY 212
++++M S P+ +TY ++ + L +++H
Sbjct: 263 LYKQMLQSSIGPNTVTYNSLI------------------------NGLCMHGRLYH---- 294
Query: 213 MYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVS---KIYDQMQRAGLQP 269
A+K F LMA +G + VTYN+L++ + V K++ +M R GL
Sbjct: 295 ----------AKKTFDLMASKGCFPNVVTYNTLINGFCKSRRVEDGMKLFQRMYREGLVG 344
Query: 270 DVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVF 329
D +Y LI+ Y + + A +F M+ GV P + ILL ++G + A F
Sbjct: 345 DTFTYNTLIHGYCQVGKLRVAKDIFSWMVSCGVTPDIITHCILLHGLCVNGEIGSAMVKF 404
Query: 330 KCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKV 389
MR I +Y M+ A +E A + F RL +G P+ TY +I G K
Sbjct: 405 NDMRSGEKYLGIVAYNIMIHGLCKADKVEEAWELFCRLPVEGVKPDARTYTIMILGLCKN 464
Query: 390 NNLEKMMEIYDKMRVNGI 407
+ E++ +M+ +GI
Sbjct: 465 GPRREADELFRRMKEDGI 482
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 67/286 (23%), Positives = 132/286 (46%), Gaps = 41/286 (14%)
Query: 93 DFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEA 152
D N + F LI + K+G+ +A+ + M ++ P+++++ +L+ + GR +A+
Sbjct: 787 DPNVIFFTALIDTFVKEGNLLEAKNLYKEMIRRSVHPNILTYNSLINGFCIQGRLGDAKH 846
Query: 153 IFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIY 212
+F M S G P +TY ++ F ++ + ++ ++F + + L D ++ +I+
Sbjct: 847 MFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTHQ---GLVGDAFTYNTLIH 903
Query: 213 MYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSK---IYDQMQRAGLQP 269
Y +AG A+K+F M + GV VTYN L+ N ++ K + + +Q+ +
Sbjct: 904 GYCQAGKLNVAQKVFNRMVDCGVPPDIVTYNILLDCLCNNGKIEKALVMVEDLQKNQMDV 963
Query: 270 DVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVF 329
D+++Y ++I + + +EA +F + GV+ LDA A
Sbjct: 964 DIITYNIIIQGMCRNDKVKEAWCLFRSLTRKGVK---------LDAIA------------ 1002
Query: 330 KCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPN 375
Y TM+S A+K R+K+DGF+P+
Sbjct: 1003 --------------YITMISGLCRNGLRREADKLCTRMKEDGFMPS 1034
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 95/215 (44%), Gaps = 1/215 (0%)
Query: 286 REEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYT 345
R E+AL +F EM+ + P+ + LL A A + + M S D+ S+T
Sbjct: 45 RFEDALDLFLEMVQSQPLPSVVDFTRLLTAIANLRRYETVIYFSQQMELFGISHDLYSFT 104
Query: 346 TMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVN 405
++ + S + A ++ + G+ P+++T+G+L+ G+ N + + M +
Sbjct: 105 ILIHCFCRCSRLSLALSILGKMMKLGYDPSIVTFGSLLHGFCLRNRIHDAFSLVASMVKS 164
Query: 406 GIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCG-FPPDQKAKNILLSLAKTADERNE 464
G +PN ++ T++D KN D + A+ EME G D N LL+ + E +
Sbjct: 165 GYEPNVVVYNTLIDCLCKNGDVNIALELLNEMEKKGRLAADLVTYNTLLTGLCYSGEWRQ 224
Query: 465 ANELLGNFNHPNNEPGINGLSISVDEEDDDDDDDE 499
A +L + P + + +D + DE
Sbjct: 225 AARILRDMTKRRINPDVFTFTALIDAFVKQGNLDE 259
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 84/464 (18%), Positives = 171/464 (36%), Gaps = 66/464 (14%)
Query: 88 IQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRY 147
+QS N + + LI G A+K M KG P+VV++ L+ + + R
Sbjct: 268 LQSSIGPNTVTYNSLINGLCMHGRLYHAKKTFDLMASKGCFPNVVTYNTLINGFCKSRRV 327
Query: 148 KNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSP-------- 199
++ +F+RM G TY ++ + + K + A+++F ++ +P
Sbjct: 328 EDGMKLFQRMYREGLVGDTFTYNTLIHGYCQVGKLRVAKDIFSWMVSCGVTPDIITHCIL 387
Query: 200 -------------------LKPDQKM-----FHMMIYMYKKAGGYEKARKLFALMAERGV 235
++ +K +++MI+ KA E+A +LF + GV
Sbjct: 388 LHGLCVNGEIGSAMVKFNDMRSGEKYLGIVAYNIMIHGLCKADKVEEAWELFCRLPVEGV 447
Query: 236 QQSTVTYN-SLMSFETN--YKEVSKIYDQMQRAGLQPDV-------------VSYALLIN 279
+ TY ++ N +E +++ +M+ G+ VS +I
Sbjct: 448 KPDARTYTIMILGLCKNGPRREADELFRRMKEDGIICQAEDGHLGEHGTNNQVSLGTIII 507
Query: 280 AYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTV----------- 328
+ R E+ ++ D + + + + ++ G V + +
Sbjct: 508 CPKRRRSIMESGDLYYYYSDTTLWSSLVGLIPIASSSSVKGFVRRHLLLLERGNNPESRS 567
Query: 329 FKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAK 388
F Y L + ++ + A F + Q +P+++ + ++ AK
Sbjct: 568 FSGASHHHHHHHHHHYRERLRSELHCIKFDDAFGLFCEMLQSRPIPSIVDFTRVLTAIAK 627
Query: 389 VNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKA 448
+N + ++ ++ KM GI + FT ++ + + F A+ +M GF P
Sbjct: 628 MNKFDIVIYLFHKMENLGISHDLYSFTILIHCFCRCSRFSLALALLGKMMKLGFQPSIVT 687
Query: 449 KNILLSLAKTADERNEANELLGNFNHPNNEPG-------INGLS 485
LL+ + EA L+ + EP INGL
Sbjct: 688 LGSLLNGFCQGNRFQEAVSLVDSMAELGLEPNVVIYNTVINGLC 731
Score = 62.0 bits (149), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 47/239 (19%), Positives = 94/239 (39%), Gaps = 36/239 (15%)
Query: 252 YKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNI 311
+++ ++ +M ++ P VV + L+ A RR E + ++M G+ ++ I
Sbjct: 46 FEDALDLFLEMVQSQPLPSVVDFTRLLTAIANLRRYETVIYFSQQMELFGISHDLYSFTI 105
Query: 312 LLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDG 371
L+ F + A ++ M + P I ++ ++L + + + A + + G
Sbjct: 106 LIHCFCRCSRLSLALSILGKMMKLGYDPSIVTFGSLLHGFCLRNRIHDAFSLVASMVKSG 165
Query: 372 FVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNG------------------------- 406
+ PNV+ Y TLI K ++ +E+ ++M G
Sbjct: 166 YEPNVVVYNTLIDCLCKNGDVNIALELLNEMEKKGRLAADLVTYNTLLTGLCYSGEWRQA 225
Query: 407 -----------IKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLS 454
I P+ FT ++DA+ K + D A YK+M P+ N L++
Sbjct: 226 ARILRDMTKRRINPDVFTFTALIDAFVKQGNLDEAQELYKQMLQSSIGPNTVTYNSLIN 284
>gi|225439731|ref|XP_002272943.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
chloroplastic [Vitis vinifera]
Length = 772
Score = 154 bits (390), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 97/367 (26%), Positives = 174/367 (47%), Gaps = 7/367 (1%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
+E F L+ + ++G+ N A ++ M G S V+ L+ Y + GR + +
Sbjct: 245 DEKTFTTLMQGFIEEGNMNGALRIREQMVAAGCPSSNVTVNVLVHGYCKEGRIEEVLSFI 304
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
M + G RP T+ ++ K A E+ +L E PD ++ +I+
Sbjct: 305 DEMSNEGFRPDRFTFNSLVNGLCRIGHVKHALEILDVMLQEG---FDPDIFTYNSLIFGL 361
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSLMSF---ETNYKEVSKIYDQMQRAGLQPDV 271
K G E+A ++ M R +TVTYN+L+S E +E +++ + G+ PDV
Sbjct: 362 CKLGEVEEAVEILNQMILRDFSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDV 421
Query: 272 VSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKC 331
++ LI A+ +FEEM G P YN+L+D+ G +++A ++ K
Sbjct: 422 CTFNSLIQGLCLTNNHRLAMELFEEMKTKGCHPDEFTYNMLIDSLCSRGRLEEALSLLKE 481
Query: 332 MRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNN 391
M CS ++ +Y T++ + +E AE+ F ++ G NV+TY TLI G K
Sbjct: 482 MESSGCSRNVVTYNTLIDGFCKNKRIEEAEEIFDEMELQGISRNVVTYNTLIDGLCKNRR 541
Query: 392 LEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKA-KN 450
+E+ ++ D+M + G+KP++ + +++ + + D A + M S G PD
Sbjct: 542 VEEAAQLMDQMLMEGLKPDKFTYNSLLTYFCRAGDIKKAADIVQTMTSNGCEPDSVTYGT 601
Query: 451 ILLSLAK 457
++L L+K
Sbjct: 602 LILGLSK 608
Score = 139 bits (349), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 106/414 (25%), Positives = 194/414 (46%), Gaps = 13/414 (3%)
Query: 37 QIEEVGSAVAVLRSERTRGQPLPKDLVLGTLVRLKQLKKWNVVSEVLEWLRIQSWWDFNE 96
+IEEV S + + +E R + ++ L R+ +K + +V+ +Q +D +
Sbjct: 296 RIEEVLSFIDEMSNEGFRPDRFTFNSLVNGLCRIGHVKHALEILDVM----LQEGFDPDI 351
Query: 97 MDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRR 156
+ LI K G+ +A ++L+ M + ++P+ V++ L+ + + + A + R
Sbjct: 352 FTYNSLIFGLCKLGEVEEAVEILNQMILRDFSPNTVTYNTLISTLCKENQVEEATELARV 411
Query: 157 MQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSP-LKPDQKMFHMMIYMYK 215
+ S G P T+ +++ N + A E+F +E K+ PD+ ++M+I
Sbjct: 412 LTSKGILPDVCTFNSLIQGLCLTNNHRLAMELF----EEMKTKGCHPDEFTYNMLIDSLC 467
Query: 216 KAGGYEKARKLFALMAERGVQQSTVTYNSLM-SFETNYK--EVSKIYDQMQRAGLQPDVV 272
G E+A L M G ++ VTYN+L+ F N + E +I+D+M+ G+ +VV
Sbjct: 468 SRGRLEEALSLLKEMESSGCSRNVVTYNTLIDGFCKNKRIEEAEEIFDEMELQGISRNVV 527
Query: 273 SYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCM 332
+Y LI+ K RR EEA + ++ML G++P YN LL F +G + +A + + M
Sbjct: 528 TYNTLIDGLCKNRRVEEAAQLMDQMLMEGLKPDKFTYNSLLTYFCRAGDIKKAADIVQTM 587
Query: 333 RRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNL 392
+ C PD +Y T++ A +E A + R ++ G V TY +IK +
Sbjct: 588 TSNGCEPDSVTYGTLILGLSKAGRVELASRLLRTVQLKGMVLAPQTYNPVIKALFREKRT 647
Query: 393 EKMMEIYDKMRVNGIKPNQTIFTTIMDAYGK-NKDFDSAVVWYKEMESCGFPPD 445
+ + ++ +M G P+ + + AV + EM GF PD
Sbjct: 648 SEAVRLFREMMEKGDPPDAVTYKVVFRGLCSGGGPIGEAVDFLVEMTDKGFLPD 701
Score = 135 bits (339), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 100/395 (25%), Positives = 176/395 (44%), Gaps = 7/395 (1%)
Query: 79 VSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALM 138
+ ++L+W Q + + + + ++ GK G F +VL M G + L+
Sbjct: 88 ILDLLDWASKQPNFVPSSVIYEEVLRKLGKDGSFGSMRRVLQEMKHTGCEIRRGTFLILI 147
Query: 139 EAYGRGGRYKNAEAIFRRMQSS-GPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEK 197
E+Y + + A A+ M+ G + A TY +L + V+ NK K E V ++
Sbjct: 148 ESYAKFELFDEAVAVVDIMEEEFGLKLDAFTYNFLLNVLVDGNKLKLVEIVNSRMVSRG- 206
Query: 198 SPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSF---ETNYKE 254
+KPD F+++I +A A + M G+ T+ +LM E N
Sbjct: 207 --IKPDVTTFNILIKALCRAHQIRPAILMMEEMGSYGLSPDEKTFTTLMQGFIEEGNMNG 264
Query: 255 VSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLD 314
+I +QM AG V+ +L++ Y K R EE L+ +EM + G RP +N L++
Sbjct: 265 ALRIREQMVAAGCPSSNVTVNVLVHGYCKEGRIEEVLSFIDEMSNEGFRPDRFTFNSLVN 324
Query: 315 AFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVP 374
G V A + M ++ PDI +Y +++ ++E A + ++ F P
Sbjct: 325 GLCRIGHVKHALEILDVMLQEGFDPDIFTYNSLIFGLCKLGEVEEAVEILNQMILRDFSP 384
Query: 375 NVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWY 434
N +TY TLI K N +E+ E+ + GI P+ F +++ + A+ +
Sbjct: 385 NTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTNNHRLAMELF 444
Query: 435 KEMESCGFPPDQKAKNILLSLAKTADERNEANELL 469
+EM++ G PD+ N+L+ + EA LL
Sbjct: 445 EEMKTKGCHPDEFTYNMLIDSLCSRGRLEEALSLL 479
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 94/385 (24%), Positives = 173/385 (44%), Gaps = 8/385 (2%)
Query: 99 FLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQ 158
F +LI A + A ++ M G +P + T LM+ + G A I +M
Sbjct: 214 FNILIKALCRAHQIRPAILMMEEMGSYGLSPDEKTFTTLMQGFIEEGNMNGALRIREQMV 273
Query: 159 SSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDE-EKSPLKPDQKMFHMMIYMYKKA 217
++G S +T +++ + + + +E ++ +DE +PD+ F+ ++ +
Sbjct: 274 AAGCPSSNVTVNVLVHGYCKEGRIEEV----LSFIDEMSNEGFRPDRFTFNSLVNGLCRI 329
Query: 218 GGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSK---IYDQMQRAGLQPDVVSY 274
G + A ++ +M + G TYNSL+ EV + I +QM P+ V+Y
Sbjct: 330 GHVKHALEILDVMLQEGFDPDIFTYNSLIFGLCKLGEVEEAVEILNQMILRDFSPNTVTY 389
Query: 275 ALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRR 334
LI+ K + EEA + + G+ P +N L+ ++ A +F+ M+
Sbjct: 390 NTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTNNHRLAMELFEEMKT 449
Query: 335 DRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEK 394
C PD +Y ++ + + +E A + ++ G NV+TY TLI G+ K +E+
Sbjct: 450 KGCHPDEFTYNMLIDSLCSRGRLEEALSLLKEMESSGCSRNVVTYNTLIDGFCKNKRIEE 509
Query: 395 MMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLS 454
EI+D+M + GI N + T++D KN+ + A +M G PD+ N LL+
Sbjct: 510 AEEIFDEMELQGISRNVVTYNTLIDGLCKNRRVEEAAQLMDQMLMEGLKPDKFTYNSLLT 569
Query: 455 LAKTADERNEANELLGNFNHPNNEP 479
A + +A +++ EP
Sbjct: 570 YFCRAGDIKKAADIVQTMTSNGCEP 594
>gi|152717466|dbj|BAF73724.1| pentatricopeptide repeat protein [Raphanus sativus]
Length = 687
Score = 154 bits (390), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 110/428 (25%), Positives = 198/428 (46%), Gaps = 26/428 (6%)
Query: 30 NWRRLMNQIEEVGSAV-AVLRSERTRGQPL-PKDLVLGTLVRLKQLKKWNVVS--EVLEW 85
+ LMN + G V AV +R L P + GT+V KK + VS +L
Sbjct: 186 TFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVD-GMCKKGDTVSALNLLRK 244
Query: 86 LRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGG 145
+ S N + + +I + K G + A+ + + M +KG P + ++ +++ + G
Sbjct: 245 MEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSG 304
Query: 146 RYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSP--LKPD 203
R+ +AE + + M P +TY ++ FV+ KF EAEE++ +E P + P+
Sbjct: 305 RWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELY-----DEMLPRGIIPN 359
Query: 204 QKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVS---KIYD 260
+ MI + K + A +F LMA +G + +T+N+L+ K + ++
Sbjct: 360 TITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLH 419
Query: 261 QMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISG 320
+M GL D +Y LI+ + AL + +EM+ +G+ P + LLD +G
Sbjct: 420 EMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNG 479
Query: 321 MVDQARTVFKCMRRDR-----------CSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQ 369
+ A +FK M++ + PD+ +Y ++S +N AE+ + +
Sbjct: 480 KLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPH 539
Query: 370 DGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDS 429
G VP+ ITY ++I G K + L++ +++D M PN FTT+++ Y K D
Sbjct: 540 RGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDD 599
Query: 430 AVVWYKEM 437
+ + EM
Sbjct: 600 GLELFCEM 607
Score = 152 bits (383), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 116/483 (24%), Positives = 214/483 (44%), Gaps = 55/483 (11%)
Query: 48 LRSERTRGQPLPKDL----VLGTLVRL----------KQLKKWNVVSEVLEW-LRIQSWW 92
L S+ R +PLP + ++G +VR+ +++++ + ++ + + I+ +
Sbjct: 66 LFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFTILIKCFC 125
Query: 93 DFNEMDFLMLITAYGKQGDFNKAEKVLSF----------------------MNKKGYAPS 130
+++ F + + +GK V++F M + P+
Sbjct: 126 SCSKLPFAL--STFGKLTKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFHQMFETTCRPN 183
Query: 131 VVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFM 190
VV+ T LM R GR A A+ RM G +P+ +TY I+ + A +
Sbjct: 184 VVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLR 243
Query: 191 TLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLM-SFE 249
+ EE S + P+ ++ +I K G + A+ LF M E+G+ TYNS++ F
Sbjct: 244 KM--EEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFC 301
Query: 250 TN--YKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHK 307
++ + + ++ +M + PDVV+Y LINA+ K + EA +++EML G+ P
Sbjct: 302 SSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTI 361
Query: 308 AYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRL 367
Y+ ++D F +D A +F M CSP++ ++ T++ Y A ++ + +
Sbjct: 362 TYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEM 421
Query: 368 KQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDF 427
+ G V + TY TLI G+ V +L +++ +M +G+ P+ T++D N
Sbjct: 422 TETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKL 481
Query: 428 DSAVVWYKEMESC-----------GFPPDQKAKNILLSLAKTADERNEANELLGNFNHPN 476
A+ +K M+ G PD + NIL+S + EA EL H
Sbjct: 482 KDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRG 541
Query: 477 NEP 479
P
Sbjct: 542 IVP 544
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 105/394 (26%), Positives = 191/394 (48%), Gaps = 23/394 (5%)
Query: 77 NVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTA 136
N+ +E+ E + +N M I + G ++ AE++L M ++ +P VV++ A
Sbjct: 276 NLFTEMQEKGIFPDLFTYNSM-----IVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNA 330
Query: 137 LMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEE 196
L+ A+ + G++ AE ++ M G P+ +TY ++ F + N+ AE +F + +
Sbjct: 331 LINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKG 390
Query: 197 KSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVS 256
SP + F+ +I Y A + +L M E G+ T TYN+L+ +++
Sbjct: 391 CSP---NLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLN 447
Query: 257 KIYDQMQR---AGLQPDVVSYALLINAYGKARREEEALAVFEEM------LDA-----GV 302
D +Q +GL PD+V+ L++ + ++AL +F+ M LDA GV
Sbjct: 448 AALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGV 507
Query: 303 RPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEK 362
P + YNIL+ G +A +++ M PD +Y++M+ S ++ A +
Sbjct: 508 EPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQ 567
Query: 363 FFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYG 422
F + F PNV+T+ TLI GY K ++ +E++ +M GI N + T++ +
Sbjct: 568 MFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICGFR 627
Query: 423 KNKDFDSAVVWYKEMESCGFPPDQ-KAKNILLSL 455
K + + A+ ++EM S G PD +N+L L
Sbjct: 628 KVGNINGALDIFQEMISSGVYPDTITIRNMLTGL 661
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 82/351 (23%), Positives = 173/351 (49%), Gaps = 17/351 (4%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
LI A+ K+G F +AE++ M +G P+ ++++++++ + + R AE +F M + G
Sbjct: 331 LINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKG 390
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
P+ +T+ ++ + A + + E+ L + ++ L D ++ +I+ + G
Sbjct: 391 CSPNLITFNTLIDGYCGAKRIDDGMEL---LHEMTETGLVADTTTYNTLIHGFYLVGDLN 447
Query: 222 KARKLFALMAERGVQQSTVTYNSLMSFETN---YKEVSKIYDQMQRA-----------GL 267
A L M G+ VT ++L+ + K+ +++ MQ++ G+
Sbjct: 448 AALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGV 507
Query: 268 QPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQART 327
+PDV +Y +LI+ + EA ++EEM G+ P Y+ ++D +D+A
Sbjct: 508 EPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQ 567
Query: 328 VFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYA 387
+F M SP++ ++TT+++ Y A ++ + F + + G V N ITY TLI G+
Sbjct: 568 MFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICGFR 627
Query: 388 KVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEME 438
KV N+ ++I+ +M +G+ P+ ++ ++ AV ++++
Sbjct: 628 KVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRAVAMLEKLQ 678
Score = 105 bits (262), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 66/260 (25%), Positives = 119/260 (45%), Gaps = 4/260 (1%)
Query: 214 YKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKE---VSKIYDQMQRAGLQPD 270
+ + G E A LF+ M S V + LM + V +Y +M+R ++ D
Sbjct: 54 FHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCD 113
Query: 271 VVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFK 330
+ S+ +LI + + AL+ F ++ G+ P +N LL + V +A +F
Sbjct: 114 IYSFTILIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFH 173
Query: 331 CMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVN 390
M C P++ ++TT+++ + A R+ +DG P ITYGT++ G K
Sbjct: 174 QMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKG 233
Query: 391 NLEKMMEIYDKM-RVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAK 449
+ + + KM V+ I PN I++ I+D+ K+ A + EM+ G PD
Sbjct: 234 DTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTY 293
Query: 450 NILLSLAKTADERNEANELL 469
N ++ ++ ++A +LL
Sbjct: 294 NSMIVGFCSSGRWSDAEQLL 313
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 69/325 (21%), Positives = 141/325 (43%), Gaps = 17/325 (5%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + + +I + KQ + AE + M KG +P++++ L++ Y R + +
Sbjct: 359 NTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELL 418
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
M +G TY ++ F A ++ ++ S L PD ++
Sbjct: 419 HEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMI---SSGLCPDIVTCDTLLDGL 475
Query: 215 KKAGGYEKARKLFALMAER-----------GVQQSTVTYNSLMSFETN---YKEVSKIYD 260
G + A ++F +M + GV+ TYN L+S N + E ++Y+
Sbjct: 476 CDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYE 535
Query: 261 QMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISG 320
+M G+ PD ++Y+ +I+ K R +EA +F+ M P + L++ + +G
Sbjct: 536 EMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAG 595
Query: 321 MVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYG 380
VD +F M R + +Y T++ + ++ GA F+ + G P+ IT
Sbjct: 596 RVDDGLELFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISSGVYPDTITIR 655
Query: 381 TLIKGYAKVNNLEKMMEIYDKMRVN 405
++ G L++ + + +K++++
Sbjct: 656 NMLTGLWSKEELKRAVAMLEKLQMS 680
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/171 (18%), Positives = 81/171 (47%), Gaps = 3/171 (1%)
Query: 101 MLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSS 160
+LI+ +G F +AE++ M +G P ++++++++ + R A +F M S
Sbjct: 516 ILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSK 575
Query: 161 GPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGY 220
P+ +T+ ++ + +A + + E+F + + + + + +I ++K G
Sbjct: 576 SFSPNVVTFTTLINGYCKAGRVDDGLELFCEM---GRRGIVANAITYITLICGFRKVGNI 632
Query: 221 EKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSKIYDQMQRAGLQPDV 271
A +F M GV T+T ++++ + +E+ + +++ + D+
Sbjct: 633 NGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRAVAMLEKLQMSMDL 683
>gi|449507709|ref|XP_004163108.1| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
mitochondrial-like [Cucumis sativus]
Length = 999
Score = 154 bits (390), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 98/365 (26%), Positives = 173/365 (47%), Gaps = 8/365 (2%)
Query: 94 FNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAI 153
N + + +I K G+ KA + + M G P ++ L++ Y + A +
Sbjct: 379 LNVVTYNAMIGGIAKAGEMAKAMSLFNEMLMAGIEPDTWTYNLLIDGYLKSHDMAKACEL 438
Query: 154 FRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYM 213
M++ PS TY +++ ++ ++A EV ++ ++ +KP+ M+ +I
Sbjct: 439 LAEMKARKLTPSPFTYSVLISGLCHSSDLQKANEVLDQMI---RNGVKPNVFMYGTLIKA 495
Query: 214 YKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSK---IYDQMQRAGLQPD 270
Y + YE A +L +M GV YN L+ K+V + + M G++P+
Sbjct: 496 YVQESRYEMAIELLKIMIANGVLPDLFCYNCLIIGLCRAKKVEEAKMLLVDMGEKGIKPN 555
Query: 271 VVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFK 330
+Y IN Y K+ + A F++ML +G+ P + Y IL+ G +A + FK
Sbjct: 556 AHTYGAFINLYSKSGEIQVAERYFKDMLSSGIVPNNVIYTILIKGHCDVGNTVEALSTFK 615
Query: 331 CMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVN 390
CM PDI +Y+ ++ + + A F + + G VP+V Y +LI G+ K
Sbjct: 616 CMLEKGLIPDIRAYSAIIHSLSKNGKTKEAMGVFLKFLKTGVVPDVFLYNSLISGFCKEG 675
Query: 391 NLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYG--KNKDFDSAVVWYKEMESCGFPPDQKA 448
++EK ++YD+M NGI PN ++ T+++ YG K+ + A + EM S G PD
Sbjct: 676 DIEKASQLYDEMLHNGINPNIVVYNTLINDYGYCKSGNLTEAFKLFDEMISKGISPDGYI 735
Query: 449 KNILL 453
IL+
Sbjct: 736 YCILI 740
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 106/414 (25%), Positives = 191/414 (46%), Gaps = 39/414 (9%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
I + G ++A +V M +KG P ++T L++ + + R K A+ IF M SSG
Sbjct: 282 FIGGLCQTGAVDEALEVKKLMMEKGLGPDGHTYTLLVDGFCKQKRSKEAKLIFESMPSSG 341
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEV-------------------------------FM 190
P+ TY ++ F++ +EA + M
Sbjct: 342 LNPNRFTYTALIDGFIKEGNIEEALRIKDEMITRGLKLNVVTYNAMIGGIAKAGEMAKAM 401
Query: 191 TLLDEE-KSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMS-- 247
+L +E + ++PD ++++I Y K+ KA +L A M R + S TY+ L+S
Sbjct: 402 SLFNEMLMAGIEPDTWTYNLLIDGYLKSHDMAKACELLAEMKARKLTPSPFTYSVLISGL 461
Query: 248 -FETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTH 306
++ ++ +++ DQM R G++P+V Y LI AY + R E A+ + + M+ GV P
Sbjct: 462 CHSSDLQKANEVLDQMIRNGVKPNVFMYGTLIKAYVQESRYEMAIELLKIMIANGVLPDL 521
Query: 307 KAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRR 366
YN L+ + V++A+ + M P+ +Y ++ Y + +++ AE++F+
Sbjct: 522 FCYNCLIIGLCRAKKVEEAKMLLVDMGEKGIKPNAHTYGAFINLYSKSGEIQVAERYFKD 581
Query: 367 LKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKD 426
+ G VPN + Y LIKG+ V N + + + M G+ P+ ++ I+ + KN
Sbjct: 582 MLSSGIVPNNVIYTILIKGHCDVGNTVEALSTFKCMLEKGLIPDIRAYSAIIHSLSKNGK 641
Query: 427 FDSAVVWYKEMESCGFPPDQKAKNILLS-LAKTADERNEA---NELLGNFNHPN 476
A+ + + G PD N L+S K D + +E+L N +PN
Sbjct: 642 TKEAMGVFLKFLKTGVVPDVFLYNSLISGFCKEGDIEKASQLYDEMLHNGINPN 695
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 110/437 (25%), Positives = 185/437 (42%), Gaps = 44/437 (10%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
I Y K G+ AE+ M G P+ V +T L++ + G A + F+ M G
Sbjct: 562 FINLYSKSGEIQVAERYFKDMLSSGIVPNNVIYTILIKGHCDVGNTVEALSTFKCMLEKG 621
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
P Y I+ + K KEA VF+ L K+ + PD +++ +I + K G E
Sbjct: 622 LIPDIRAYSAIIHSLSKNGKTKEAMGVFLKFL---KTGVVPDVFLYNSLISGFCKEGDIE 678
Query: 222 KARKLFALMAERGVQQSTVTYNSLM-----SFETNYKEVSKIYDQMQRAGLQPDVVSYAL 276
KA +L+ M G+ + V YN+L+ N E K++D+M G+ PD Y +
Sbjct: 679 KASQLYDEMLHNGINPNIVVYNTLINDYGYCKSGNLTEAFKLFDEMISKGISPDGYIYCI 738
Query: 277 LINAYGKARREEEALAVF----------------------------------EEMLDAGV 302
LI+ GK E+AL++F ++M+D +
Sbjct: 739 LIDGCGKEGNLEKALSLFHEAQQKSVGSLSAFNSLIDSFCKHGKVIEARELFDDMVDKKL 798
Query: 303 RPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEK 362
P Y IL+DA+ + M+++A +F M P+ +YT++L +Y +
Sbjct: 799 TPNIVTYTILIDAYGKAEMMEEAEQLFLDMETRNIIPNTLTYTSLLLSYNQIGNRFKMIS 858
Query: 363 FFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYG 422
F+ ++ G + I YG + Y K + +++ +K V GIK +F ++
Sbjct: 859 LFKDMEARGIACDAIAYGVMASAYCKEGKSLEALKLLNKSLVEGIKLEDDVFDALIFHLC 918
Query: 423 KNKDFDSAVVWYKEMESCGFPPDQKAKN-ILLSLAKTADERNEANELLGNFNHPNNEPGI 481
K K + + EM K N +LL K+ +E +EA+++LG P
Sbjct: 919 KEKQISTVLELLSEMGKEELSLSSKTCNTLLLGFYKSGNE-DEASKVLGVMQRLGWVPTS 977
Query: 482 NGLSISVDEEDDDDDDD 498
L+ S+ DD D
Sbjct: 978 LSLTDSISTGRDDMKSD 994
Score = 131 bits (330), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 92/368 (25%), Positives = 178/368 (48%), Gaps = 11/368 (2%)
Query: 117 KVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLF 176
KV M + P V ++T +++A+ + G + + M+ +P+ TY +
Sbjct: 228 KVYGSMVEAKIVPDVYTYTNVIKAHCKVGDVIKGKMVLSEMEKEC-KPNLFTYNAFIGGL 286
Query: 177 VEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQ 236
+ EA EV ++++ L PD + +++ + K ++A+ +F M G+
Sbjct: 287 CQTGAVDEALEVKKLMMEK---GLGPDGHTYTLLVDGFCKQKRSKEAKLIFESMPSSGLN 343
Query: 237 QSTVTYNSLM-SF--ETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAV 293
+ TY +L+ F E N +E +I D+M GL+ +VV+Y +I KA +A+++
Sbjct: 344 PNRFTYTALIDGFIKEGNIEEALRIKDEMITRGLKLNVVTYNAMIGGIAKAGEMAKAMSL 403
Query: 294 FEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVN 353
F EML AG+ P YN+L+D + S + +A + M+ + +P +Y+ ++S +
Sbjct: 404 FNEMLMAGIEPDTWTYNLLIDGYLKSHDMAKACELLAEMKARKLTPSPFTYSVLISGLCH 463
Query: 354 ASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTI 413
+SD++ A + ++ ++G PNV YGTLIK Y + + E +E+ M NG+ P+
Sbjct: 464 SSDLQKANEVLDQMIRNGVKPNVFMYGTLIKAYVQESRYEMAIELLKIMIANGVLPDLFC 523
Query: 414 FTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEA----NELL 469
+ ++ + K + A + +M G P+ ++L + E A ++L
Sbjct: 524 YNCLIIGLCRAKKVEEAKMLLVDMGEKGIKPNAHTYGAFINLYSKSGEIQVAERYFKDML 583
Query: 470 GNFNHPNN 477
+ PNN
Sbjct: 584 SSGIVPNN 591
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 101/405 (24%), Positives = 183/405 (45%), Gaps = 11/405 (2%)
Query: 81 EVLEWLRIQSWWDF---NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTAL 137
E+L+ L ++ + +F N F + I + G N+A V +G+ P+++ L
Sbjct: 155 EILDSL-VRCYREFGGSNLTVFDIFIDKFRVLGFLNEASSVFIASISEGFFPTLICCNNL 213
Query: 138 MEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEK 197
M + ++ M + P TY ++K + + + V L E +
Sbjct: 214 MRDLLKANMMGLFWKVYGSMVEAKIVPDVYTYTNVIKAHCKVGDVIKGKMV----LSEME 269
Query: 198 SPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLM---SFETNYKE 254
KP+ ++ I + G ++A ++ LM E+G+ TY L+ + KE
Sbjct: 270 KECKPNLFTYNAFIGGLCQTGAVDEALEVKKLMMEKGLGPDGHTYTLLVDGFCKQKRSKE 329
Query: 255 VSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLD 314
I++ M +GL P+ +Y LI+ + K EEAL + +EM+ G++ YN ++
Sbjct: 330 AKLIFESMPSSGLNPNRFTYTALIDGFIKEGNIEEALRIKDEMITRGLKLNVVTYNAMIG 389
Query: 315 AFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVP 374
A +G + +A ++F M PD +Y ++ Y+ + DM A + +K P
Sbjct: 390 GIAKAGEMAKAMSLFNEMLMAGIEPDTWTYNLLIDGYLKSHDMAKACELLAEMKARKLTP 449
Query: 375 NVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWY 434
+ TY LI G ++L+K E+ D+M NG+KPN ++ T++ AY + ++ A+
Sbjct: 450 SPFTYSVLISGLCHSSDLQKANEVLDQMIRNGVKPNVFMYGTLIKAYVQESRYEMAIELL 509
Query: 435 KEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEP 479
K M + G PD N L+ A + EA LL + +P
Sbjct: 510 KIMIANGVLPDLFCYNCLIIGLCRAKKVEEAKMLLVDMGEKGIKP 554
>gi|359492658|ref|XP_002281859.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g19290-like [Vitis vinifera]
Length = 939
Score = 154 bits (390), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 102/391 (26%), Positives = 186/391 (47%), Gaps = 12/391 (3%)
Query: 101 MLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSS 160
+++ A+ K G ++A + M G P++V++ +L+ Y G + A+ + + M
Sbjct: 231 IMVNAFCKDGKVDEAAGFVKKMENLGVEPNIVTYHSLINGYVSLGDVEAAKGVLKFMSEK 290
Query: 161 GPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGY 220
G + +TY +++K + + K EAE+V + +E++ L PD++ + ++I Y + G
Sbjct: 291 GVSRNVVTYTLLIKGYCKQCKMDEAEKVLRGM--QEEAALVPDERAYGVLIDGYCRTGKI 348
Query: 221 EKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSK---IYDQMQRAGLQPDVVSYALL 277
+ A +L M G++ + NSL++ E+ + + +M L+PD SY L
Sbjct: 349 DDAVRLLDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEGVITRMVDWNLKPDSYSYNTL 408
Query: 278 INAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRC 337
++ Y + EA + ++ML G+ PT YN LL G D A ++ M +
Sbjct: 409 LDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKRGV 468
Query: 338 SPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMME 397
+PD Y+T+L + EGA ++ + GF + IT+ T+I G K+ + + E
Sbjct: 469 APDEVGYSTLLDGLFKMENFEGASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEAEE 528
Query: 398 IYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAK 457
I+DKM+ G P+ + T++D Y K + A ME P + N L+S
Sbjct: 529 IFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAMEREPISPSIEMYNSLISGLF 588
Query: 458 TADERNEANELLGNFNHPNNEPGINGLSISV 488
+ E +LL E GI GL+ ++
Sbjct: 589 KSRRLVEVTDLL-------TEMGIRGLTPNI 612
Score = 132 bits (333), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 92/379 (24%), Positives = 179/379 (47%), Gaps = 7/379 (1%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKG-YAPSVVSHTALMEAYGRGGRYKNAEAI 153
N + + +LI Y KQ ++AEKVL M ++ P ++ L++ Y R G+ +A +
Sbjct: 295 NVVTYTLLIKGYCKQCKMDEAEKVLRGMQEEAALVPDERAYGVLIDGYCRTGKIDDAVRL 354
Query: 154 FRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYM 213
M G + + ++ + + + EAE V ++D LKPD ++ ++
Sbjct: 355 LDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEGVITRMVDWN---LKPDSYSYNTLLDG 411
Query: 214 YKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETN---YKEVSKIYDQMQRAGLQPD 270
Y + G +A L M + G++ + +TYN+L+ + + +I+ M + G+ PD
Sbjct: 412 YCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKRGVAPD 471
Query: 271 VVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFK 330
V Y+ L++ K E A +++++L G + +N ++ G + +A +F
Sbjct: 472 EVGYSTLLDGLFKMENFEGASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFD 531
Query: 331 CMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVN 390
M+ CSPD +Y T++ Y AS++ A K ++++ P++ Y +LI G K
Sbjct: 532 KMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAMEREPISPSIEMYNSLISGLFKSR 591
Query: 391 NLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKN 450
L ++ ++ +M + G+ PN + ++D + K D A Y EM G + +
Sbjct: 592 RLVEVTDLLTEMGIRGLTPNIVTYGALIDGWCKEGMLDKAFSSYFEMTENGLSANIIICS 651
Query: 451 ILLSLAKTADERNEANELL 469
++S +EAN L+
Sbjct: 652 TMVSGLYRLGRIDEANLLM 670
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 91/402 (22%), Positives = 176/402 (43%), Gaps = 39/402 (9%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
+E+ + L+ K +F A + + +G+ S ++ ++ + G+ AE IF
Sbjct: 471 DEVGYSTLLDGLFKMENFEGASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEAEEIF 530
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
+M+ G P +TY+ ++ + +A+ +A +V + E+ P+ P +M++ +I
Sbjct: 531 DKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAM---EREPISPSIEMYNSLISGL 587
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSLM---SFETNYKEVSKIYDQMQRAGLQPDV 271
K+ + L M RG+ + VTY +L+ E + Y +M GL ++
Sbjct: 588 FKSRRLVEVTDLLTEMGIRGLTPNIVTYGALIDGWCKEGMLDKAFSSYFEMTENGLSANI 647
Query: 272 VSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKA----------------------- 308
+ + +++ + R +EA + ++M+D G P H+
Sbjct: 648 IICSTMVSGLYRLGRIDEANLLMQKMVDHGFFPDHECFLKSDIRYAAIQKIADSLDESCK 707
Query: 309 ---------YNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEG 359
YNI + +G VD AR F + PD +Y T++ Y A +++
Sbjct: 708 TFLLPNNIVYNIAIAGLCKTGKVDDARRFFSMLSLKGFVPDNFTYCTLIHGYSAAGNVDE 767
Query: 360 AEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMD 419
A + + + G VPN++TY LI G K N+++ ++ K+ G+ PN + T++D
Sbjct: 768 AFRLRDEMLRRGLVPNIVTYNALINGLCKSENVDRAQRLFHKLHQKGLFPNVVTYNTLID 827
Query: 420 AYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLS-LAKTAD 460
Y K + D+A +M G P + L++ L K D
Sbjct: 828 GYCKIGNMDAAFKLKDKMIEEGISPSVVTYSALINGLCKHGD 869
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 76/313 (24%), Positives = 155/313 (49%), Gaps = 9/313 (2%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + + LI + K+G +KA M + G + +++ + ++ R GR A +
Sbjct: 611 NIVTYGALIDGWCKEGMLDKAFSSYFEMTENGLSANIIICSTMVSGLYRLGRIDEANLLM 670
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
++M G P ++ LK + ++ +++ +L + K+ L P+ ++++ I
Sbjct: 671 QKMVDHGFFPD---HECFLKSDI---RYAAIQKIADSLDESCKTFLLPNNIVYNIAIAGL 724
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSLM---SFETNYKEVSKIYDQMQRAGLQPDV 271
K G + AR+ F++++ +G TY +L+ S N E ++ D+M R GL P++
Sbjct: 725 CKTGKVDDARRFFSMLSLKGFVPDNFTYCTLIHGYSAAGNVDEAFRLRDEMLRRGLVPNI 784
Query: 272 VSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKC 331
V+Y LIN K+ + A +F ++ G+ P YN L+D + G +D A +
Sbjct: 785 VTYNALINGLCKSENVDRAQRLFHKLHQKGLFPNVVTYNTLIDGYCKIGNMDAAFKLKDK 844
Query: 332 MRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNN 391
M + SP + +Y+ +++ D+E + K ++ + G +I Y TL++GY +
Sbjct: 845 MIEEGISPSVVTYSALINGLCKHGDIERSMKLLNQMIKAGVDSKLIEYCTLVQGYIRSGE 904
Query: 392 LEKMMEIYDKMRV 404
++K+ ++YD M +
Sbjct: 905 MQKIHKLYDMMHI 917
Score = 115 bits (288), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 104/440 (23%), Positives = 183/440 (41%), Gaps = 45/440 (10%)
Query: 52 RTRGQPLPKDLVLGTLVRLKQLKKWNVVSEVLEWLRIQSWWDFNEMDFLM---LITAYGK 108
R P P +LV + RL L++ N +S+ ++F+ ++ A +
Sbjct: 33 RDESHPAPPELV-SRICRLVLLRRCNAISK---------------LNFVFSDDIVDAVLR 76
Query: 109 QGDFNKAEKV--LSFMNKK-GYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPS 165
N + F++K+ + P+V S+ L+ RG Y A ++
Sbjct: 77 NLRLNPTASLGFFQFVSKQQNFRPNVKSYCKLVHILSRGRMYDETRAYLNQL-------- 128
Query: 166 ALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARK 225
V+ KFK+ V L +F M++ +Y + G + A
Sbjct: 129 -----------VDLCKFKDRGNVIWDELVGVYREFAFSPTVFDMILKVYVEKGLTKNALY 177
Query: 226 LFALMAERGVQQSTVTYNSLMSFETNYKEVSK---IYDQMQRAGLQPDVVSYALLINAYG 282
+F M + G S + NSL++ E +Y QM R G+ PDV ++++NA+
Sbjct: 178 VFDNMGKCGRIPSLRSCNSLLNNLVKNGETHTAHYVYQQMIRVGIVPDVFMVSIMVNAFC 237
Query: 283 KARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDIC 342
K + +EA ++M + GV P Y+ L++ + G V+ A+ V K M S ++
Sbjct: 238 KDGKVDEAAGFVKKMENLGVEPNIVTYHSLINGYVSLGDVEAAKGVLKFMSEKGVSRNVV 297
Query: 343 SYTTMLSAYVNASDMEGAEKFFRRLKQD-GFVPNVITYGTLIKGYAKVNNLEKMMEIYDK 401
+YT ++ Y M+ AEK R ++++ VP+ YG LI GY + ++ + + D+
Sbjct: 298 TYTLLIKGYCKQCKMDEAEKVLRGMQEEAALVPDERAYGVLIDGYCRTGKIDDAVRLLDE 357
Query: 402 MRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADE 461
M G+K N I ++++ Y K + A M PD + N LL
Sbjct: 358 MLRLGLKTNLFICNSLINGYCKRGEIHEAEGVITRMVDWNLKPDSYSYNTLLDGYCREGH 417
Query: 462 RNEANELLGNFNHPNNEPGI 481
+EA L EP +
Sbjct: 418 TSEAFNLCDKMLQEGIEPTV 437
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 98/458 (21%), Positives = 176/458 (38%), Gaps = 73/458 (15%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
LI Y K+G+ ++AE V++ M P S+ L++ Y R G A + +M G
Sbjct: 373 LINGYCKRGEIHEAEGVITRMVDWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEG 432
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
P+ LTY +LK F +A +++ ++ K + PD+ + ++ K +E
Sbjct: 433 IEPTVLTYNTLLKGLCRVGAFDDALQIWHLMM---KRGVAPDEVGYSTLLDGLFKMENFE 489
Query: 222 KARKLFALMAERGVQQSTVTYNSLMSFETNYK---EVSKIYDQMQRAGLQPDVVSYALLI 278
A L+ + RG +S +T+N+++S E +I+D+M+ G PD ++Y LI
Sbjct: 490 GASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLI 549
Query: 279 NAYGKA-----------------------------------RREEEALAVFEEMLDAGVR 303
+ Y KA RR E + EM G+
Sbjct: 550 DGYCKASNVGQAFKVKGAMEREPISPSIEMYNSLISGLFKSRRLVEVTDLLTEMGIRGLT 609
Query: 304 PTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKF 363
P Y L+D + GM+D+A + + M + S +I +TM+S ++ A
Sbjct: 610 PNIVTYGALIDGWCKEGMLDKAFSSYFEMTENGLSANIIICSTMVSGLYRLGRIDEANLL 669
Query: 364 FRRLKQDGF--------------------------------VPNVITYGTLIKGYAKVNN 391
+++ GF +PN I Y I G K
Sbjct: 670 MQKMVDHGFFPDHECFLKSDIRYAAIQKIADSLDESCKTFLLPNNIVYNIAIAGLCKTGK 729
Query: 392 LEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNI 451
++ + + + G P+ + T++ Y + D A EM G P+ N
Sbjct: 730 VDDARRFFSMLSLKGFVPDNFTYCTLIHGYSAAGNVDEAFRLRDEMLRRGLVPNIVTYNA 789
Query: 452 LLSLAKTADERNEANELLGNFNHPNNEPGINGLSISVD 489
L++ ++ + A L + P + + +D
Sbjct: 790 LINGLCKSENVDRAQRLFHKLHQKGLFPNVVTYNTLID 827
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 77/343 (22%), Positives = 155/343 (45%), Gaps = 9/343 (2%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
LI Y K + +A KV M ++ +PS+ + +L+ + R + M G
Sbjct: 548 LIDGYCKASNVGQAFKVKGAMEREPISPSIEMYNSLISGLFKSRRLVEVTDLLTEMGIRG 607
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
P+ +TY ++ + + +A F + + ++ L + + M+ + G +
Sbjct: 608 LTPNIVTYGALIDGWCKEGMLDKA---FSSYFEMTENGLSANIIICSTMVSGLYRLGRID 664
Query: 222 KARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSKIYDQMQRAG---LQPDVVSYALLI 278
+A L M + G + + + Y + KI D + + L P+ + Y + I
Sbjct: 665 EANLLMQKMVDHGFFPD---HECFLKSDIRYAAIQKIADSLDESCKTFLLPNNIVYNIAI 721
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCS 338
K + ++A F + G P + Y L+ ++ +G VD+A + M R
Sbjct: 722 AGLCKTGKVDDARRFFSMLSLKGFVPDNFTYCTLIHGYSAAGNVDEAFRLRDEMLRRGLV 781
Query: 339 PDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEI 398
P+I +Y +++ + +++ A++ F +L Q G PNV+TY TLI GY K+ N++ ++
Sbjct: 782 PNIVTYNALINGLCKSENVDRAQRLFHKLHQKGLFPNVVTYNTLIDGYCKIGNMDAAFKL 841
Query: 399 YDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCG 441
DKM GI P+ ++ +++ K+ D + ++ +M G
Sbjct: 842 KDKMIEEGISPSVVTYSALINGLCKHGDIERSMKLLNQMIKAG 884
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 74/327 (22%), Positives = 147/327 (44%), Gaps = 17/327 (5%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
LI+ K + +L+ M +G P++V++ AL++ + + G A + + M +G
Sbjct: 583 LISGLFKSRRLVEVTDLLTEMGIRGLTPNIVTYGALIDGWCKEGMLDKAFSSYFEMTENG 642
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY----KKA 217
+ + ++ + EA + ++D PD + F Y K A
Sbjct: 643 LSANIIICSTMVSGLYRLGRIDEANLLMQKMVDHG---FFPDHECFLKSDIRYAAIQKIA 699
Query: 218 GGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEV---SKIYDQMQRAGLQPDVVSY 274
+++ K F L + + YN ++ +V + + + G PD +Y
Sbjct: 700 DSLDESCKTFLL-------PNNIVYNIAIAGLCKTGKVDDARRFFSMLSLKGFVPDNFTY 752
Query: 275 ALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRR 334
LI+ Y A +EA + +EML G+ P YN L++ S VD+A+ +F + +
Sbjct: 753 CTLIHGYSAAGNVDEAFRLRDEMLRRGLVPNIVTYNALINGLCKSENVDRAQRLFHKLHQ 812
Query: 335 DRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEK 394
P++ +Y T++ Y +M+ A K ++ ++G P+V+TY LI G K ++E+
Sbjct: 813 KGLFPNVVTYNTLIDGYCKIGNMDAAFKLKDKMIEEGISPSVVTYSALINGLCKHGDIER 872
Query: 395 MMEIYDKMRVNGIKPNQTIFTTIMDAY 421
M++ ++M G+ + T++ Y
Sbjct: 873 SMKLLNQMIKAGVDSKLIEYCTLVQGY 899
>gi|297830278|ref|XP_002883021.1| hypothetical protein ARALYDRAFT_479138 [Arabidopsis lyrata subsp.
lyrata]
gi|297328861|gb|EFH59280.1| hypothetical protein ARALYDRAFT_479138 [Arabidopsis lyrata subsp.
lyrata]
Length = 504
Score = 154 bits (390), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 100/358 (27%), Positives = 173/358 (48%), Gaps = 9/358 (2%)
Query: 61 DLVLGTLVRLKQLKKWNVVSEVLEWLRIQSWWDF--NEMDFLMLITAYGKQGDFNKAEKV 118
DLV T + L WN + + L F N + + LI K N A ++
Sbjct: 151 DLVTFTSL-LHGFCHWNRIEDALALFDQIVGMGFRPNVVTYTTLIHCLCKNRHLNHAVEI 209
Query: 119 LSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVE 178
+ M G P+VV++ +L+ GR+ +A + R M G +P+ +T+ ++ FV+
Sbjct: 210 FNQMGDNGIRPNVVTYNSLVSGLCEIGRWSDAAWLLRDMMKRGIQPNVITFTALIDAFVK 269
Query: 179 ANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQS 238
K EA+E++ ++ + + PD + +I G ++AR++F LM G +
Sbjct: 270 VGKIMEAKELYKVMI---QMSVYPDVFTYTALINGLCTYGRLDEARQMFYLMESNGYYPN 326
Query: 239 TVTYNSLMSFETNYKEV---SKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFE 295
VTY +L+ K V +KI+ +M + GL + ++Y +LI Y R + A VF
Sbjct: 327 EVTYTTLIHGFCKSKRVEDGTKIFYEMSQKGLVANTITYTVLIQGYCLVGRPDVAQEVFN 386
Query: 296 EMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNAS 355
+M P + YN+LLD +G V++A +FK MR+ +I +YT ++
Sbjct: 387 QMGSRRAPPDIRTYNVLLDGLCYNGYVEKALMIFKYMRKREMDINIVTYTIIIQGMCKVG 446
Query: 356 DMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTI 413
+E A F L G PNVITY T+I G+ + + + ++ KM+ +G PN+++
Sbjct: 447 KVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGFIHEADALFKKMKEDGFLPNESV 504
Score = 146 bits (368), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 88/343 (25%), Positives = 169/343 (49%), Gaps = 9/343 (2%)
Query: 112 FNKAEKVLSFMNK---KGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALT 168
+N+ E L+ ++ G+ P+VV++T L+ + +A IF +M +G RP+ +T
Sbjct: 165 WNRIEDALALFDQIVGMGFRPNVVTYTTLIHCLCKNRHLNHAVEIFNQMGDNGIRPNVVT 224
Query: 169 YQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFA 228
Y ++ E ++ +A + L D K ++P+ F +I + K G +A++L+
Sbjct: 225 YNSLVSGLCEIGRWSDAAWL---LRDMMKRGIQPNVITFTALIDAFVKVGKIMEAKELYK 281
Query: 229 LMAERGVQQSTVTYNSLMSFETNYK---EVSKIYDQMQRAGLQPDVVSYALLINAYGKAR 285
+M + V TY +L++ Y E +++ M+ G P+ V+Y LI+ + K++
Sbjct: 282 VMIQMSVYPDVFTYTALINGLCTYGRLDEARQMFYLMESNGYYPNEVTYTTLIHGFCKSK 341
Query: 286 REEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYT 345
R E+ +F EM G+ Y +L+ + + G D A+ VF M R PDI +Y
Sbjct: 342 RVEDGTKIFYEMSQKGLVANTITYTVLIQGYCLVGRPDVAQEVFNQMGSRRAPPDIRTYN 401
Query: 346 TMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVN 405
+L +E A F+ +++ N++TY +I+G KV +E +++ +
Sbjct: 402 VLLDGLCYNGYVEKALMIFKYMRKREMDINIVTYTIIIQGMCKVGKVEDAFDLFCSLFSK 461
Query: 406 GIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKA 448
G+KPN +TT++ + + A +K+M+ GF P++
Sbjct: 462 GMKPNVITYTTMISGFCRRGFIHEADALFKKMKEDGFLPNESV 504
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 86/345 (24%), Positives = 166/345 (48%), Gaps = 6/345 (1%)
Query: 112 FNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQI 171
FN+A + + M PS+V T L+ + R+ ++F +MQ G P T I
Sbjct: 63 FNEALDLFTRMVHSRPLPSIVDFTRLLSVIAKMKRFDVVISLFEQMQILGISPVLYTCNI 122
Query: 172 ILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMA 231
++ +++ A ++ K +PD F +++ + E A LF +
Sbjct: 123 VMNCVCRSSQPCRASCFLGKMM---KLGFEPDLVTFTSLLHGFCHWNRIEDALALFDQIV 179
Query: 232 ERGVQQSTVTYNSLMSFETNYKEVS---KIYDQMQRAGLQPDVVSYALLINAYGKARREE 288
G + + VTY +L+ + ++ +I++QM G++P+VV+Y L++ + R
Sbjct: 180 GMGFRPNVVTYTTLIHCLCKNRHLNHAVEIFNQMGDNGIRPNVVTYNSLVSGLCEIGRWS 239
Query: 289 EALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTML 348
+A + +M+ G++P + L+DAF G + +A+ ++K M + PD+ +YT ++
Sbjct: 240 DAAWLLRDMMKRGIQPNVITFTALIDAFVKVGKIMEAKELYKVMIQMSVYPDVFTYTALI 299
Query: 349 SAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIK 408
+ ++ A + F ++ +G+ PN +TY TLI G+ K +E +I+ +M G+
Sbjct: 300 NGLCTYGRLDEARQMFYLMESNGYYPNEVTYTTLIHGFCKSKRVEDGTKIFYEMSQKGLV 359
Query: 409 PNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILL 453
N +T ++ Y D A + +M S PPD + N+LL
Sbjct: 360 ANTITYTVLIQGYCLVGRPDVAQEVFNQMGSRRAPPDIRTYNVLL 404
>gi|30840327|emb|CAD61286.1| fertility restorer homologue [Raphanus sativus]
gi|134302843|gb|ABO70665.1| restorer-of-fertility [Raphanus sativus]
gi|157931526|gb|ABW04887.1| PPR [Raphanus sativus]
gi|194295008|gb|ABO70666.2| restorer-of-fertility [Raphanus sativus]
Length = 687
Score = 154 bits (390), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 110/428 (25%), Positives = 198/428 (46%), Gaps = 26/428 (6%)
Query: 30 NWRRLMNQIEEVGSAV-AVLRSERTRGQPL-PKDLVLGTLVRLKQLKKWNVVS--EVLEW 85
+ LMN + G V AV +R L P + GT+V KK + VS +L
Sbjct: 186 TFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVD-GMCKKGDTVSALNLLRK 244
Query: 86 LRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGG 145
+ S N + + +I + K G + A+ + + M +KG P + ++ +++ + G
Sbjct: 245 MEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSG 304
Query: 146 RYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSP--LKPD 203
R+ +AE + + M P +TY ++ FV+ KF EAEE++ +E P + P+
Sbjct: 305 RWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELY-----DEMLPRGIIPN 359
Query: 204 QKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVS---KIYD 260
+ MI + K + A +F LMA +G + +T+N+L+ K + ++
Sbjct: 360 TITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLH 419
Query: 261 QMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISG 320
+M GL D +Y LI+ + AL + +EM+ +G+ P + LLD +G
Sbjct: 420 EMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNG 479
Query: 321 MVDQARTVFKCMRRDR-----------CSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQ 369
+ A +FK M++ + PD+ +Y ++S +N AE+ + +
Sbjct: 480 KLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPH 539
Query: 370 DGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDS 429
G VP+ ITY ++I G K + L++ +++D M PN FTT+++ Y K D
Sbjct: 540 RGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDD 599
Query: 430 AVVWYKEM 437
+ + EM
Sbjct: 600 GLELFCEM 607
Score = 151 bits (382), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 116/483 (24%), Positives = 214/483 (44%), Gaps = 55/483 (11%)
Query: 48 LRSERTRGQPLPKDL----VLGTLVRL----------KQLKKWNVVSEVLEW-LRIQSWW 92
L S+ R +PLP + ++G +VR+ +++++ + ++ + + I+ +
Sbjct: 66 LFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFTILIKCFC 125
Query: 93 DFNEMDFLMLITAYGKQGDFNKAEKVLSF----------------------MNKKGYAPS 130
+++ F + + +GK V++F M + P+
Sbjct: 126 SCSKLPFAL--STFGKITKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFHQMFETTCRPN 183
Query: 131 VVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFM 190
VV+ T LM R GR A A+ RM G +P+ +TY I+ + A +
Sbjct: 184 VVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLR 243
Query: 191 TLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLM-SFE 249
+ EE S + P+ ++ +I K G + A+ LF M E+G+ TYNS++ F
Sbjct: 244 KM--EEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFC 301
Query: 250 TN--YKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHK 307
++ + + ++ +M + PDVV+Y LINA+ K + EA +++EML G+ P
Sbjct: 302 SSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTI 361
Query: 308 AYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRL 367
Y+ ++D F +D A +F M CSP++ ++ T++ Y A ++ + +
Sbjct: 362 TYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEM 421
Query: 368 KQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDF 427
+ G V + TY TLI G+ V +L +++ +M +G+ P+ T++D N
Sbjct: 422 TETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKL 481
Query: 428 DSAVVWYKEMESC-----------GFPPDQKAKNILLSLAKTADERNEANELLGNFNHPN 476
A+ +K M+ G PD + NIL+S + EA EL H
Sbjct: 482 KDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRG 541
Query: 477 NEP 479
P
Sbjct: 542 IVP 544
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 105/394 (26%), Positives = 191/394 (48%), Gaps = 23/394 (5%)
Query: 77 NVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTA 136
N+ +E+ E + +N M I + G ++ AE++L M ++ +P VV++ A
Sbjct: 276 NLFTEMQEKGIFPDLFTYNSM-----IVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNA 330
Query: 137 LMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEE 196
L+ A+ + G++ AE ++ M G P+ +TY ++ F + N+ AE +F + +
Sbjct: 331 LINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKG 390
Query: 197 KSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVS 256
SP + F+ +I Y A + +L M E G+ T TYN+L+ +++
Sbjct: 391 CSP---NLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLN 447
Query: 257 KIYDQMQR---AGLQPDVVSYALLINAYGKARREEEALAVFEEM------LDA-----GV 302
D +Q +GL PD+V+ L++ + ++AL +F+ M LDA GV
Sbjct: 448 AALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGV 507
Query: 303 RPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEK 362
P + YNIL+ G +A +++ M PD +Y++M+ S ++ A +
Sbjct: 508 EPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQ 567
Query: 363 FFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYG 422
F + F PNV+T+ TLI GY K ++ +E++ +M GI N + T++ +
Sbjct: 568 MFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICGFR 627
Query: 423 KNKDFDSAVVWYKEMESCGFPPDQ-KAKNILLSL 455
K + + A+ ++EM S G PD +N+L L
Sbjct: 628 KVGNINGALDIFQEMISSGVYPDTITIRNMLTGL 661
Score = 135 bits (341), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 82/351 (23%), Positives = 173/351 (49%), Gaps = 17/351 (4%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
LI A+ K+G F +AE++ M +G P+ ++++++++ + + R AE +F M + G
Sbjct: 331 LINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKG 390
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
P+ +T+ ++ + A + + E+ L + ++ L D ++ +I+ + G
Sbjct: 391 CSPNLITFNTLIDGYCGAKRIDDGMEL---LHEMTETGLVADTTTYNTLIHGFYLVGDLN 447
Query: 222 KARKLFALMAERGVQQSTVTYNSLMSFETN---YKEVSKIYDQMQRA-----------GL 267
A L M G+ VT ++L+ + K+ +++ MQ++ G+
Sbjct: 448 AALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGV 507
Query: 268 QPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQART 327
+PDV +Y +LI+ + EA ++EEM G+ P Y+ ++D +D+A
Sbjct: 508 EPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQ 567
Query: 328 VFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYA 387
+F M SP++ ++TT+++ Y A ++ + F + + G V N ITY TLI G+
Sbjct: 568 MFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICGFR 627
Query: 388 KVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEME 438
KV N+ ++I+ +M +G+ P+ ++ ++ AV ++++
Sbjct: 628 KVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRAVAMLEKLQ 678
Score = 105 bits (261), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 66/260 (25%), Positives = 119/260 (45%), Gaps = 4/260 (1%)
Query: 214 YKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKE---VSKIYDQMQRAGLQPD 270
+ + G E A LF+ M S V + LM + V +Y +M+R ++ D
Sbjct: 54 FHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCD 113
Query: 271 VVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFK 330
+ S+ +LI + + AL+ F ++ G+ P +N LL + V +A +F
Sbjct: 114 IYSFTILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFH 173
Query: 331 CMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVN 390
M C P++ ++TT+++ + A R+ +DG P ITYGT++ G K
Sbjct: 174 QMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKG 233
Query: 391 NLEKMMEIYDKM-RVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAK 449
+ + + KM V+ I PN I++ I+D+ K+ A + EM+ G PD
Sbjct: 234 DTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTY 293
Query: 450 NILLSLAKTADERNEANELL 469
N ++ ++ ++A +LL
Sbjct: 294 NSMIVGFCSSGRWSDAEQLL 313
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 69/325 (21%), Positives = 141/325 (43%), Gaps = 17/325 (5%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + + +I + KQ + AE + M KG +P++++ L++ Y R + +
Sbjct: 359 NTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELL 418
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
M +G TY ++ F A ++ ++ S L PD ++
Sbjct: 419 HEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMI---SSGLCPDIVTCDTLLDGL 475
Query: 215 KKAGGYEKARKLFALMAER-----------GVQQSTVTYNSLMSFETN---YKEVSKIYD 260
G + A ++F +M + GV+ TYN L+S N + E ++Y+
Sbjct: 476 CDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYE 535
Query: 261 QMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISG 320
+M G+ PD ++Y+ +I+ K R +EA +F+ M P + L++ + +G
Sbjct: 536 EMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAG 595
Query: 321 MVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYG 380
VD +F M R + +Y T++ + ++ GA F+ + G P+ IT
Sbjct: 596 RVDDGLELFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISSGVYPDTITIR 655
Query: 381 TLIKGYAKVNNLEKMMEIYDKMRVN 405
++ G L++ + + +K++++
Sbjct: 656 NMLTGLWSKEELKRAVAMLEKLQMS 680
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/171 (18%), Positives = 81/171 (47%), Gaps = 3/171 (1%)
Query: 101 MLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSS 160
+LI+ +G F +AE++ M +G P ++++++++ + R A +F M S
Sbjct: 516 ILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSK 575
Query: 161 GPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGY 220
P+ +T+ ++ + +A + + E+F + + + + + +I ++K G
Sbjct: 576 SFSPNVVTFTTLINGYCKAGRVDDGLELFCEM---GRRGIVANAITYITLICGFRKVGNI 632
Query: 221 EKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSKIYDQMQRAGLQPDV 271
A +F M GV T+T ++++ + +E+ + +++ + D+
Sbjct: 633 NGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRAVAMLEKLQMSMDL 683
>gi|134302847|gb|ABO70667.1| restorer-of-fertility [Raphanus sativus]
Length = 687
Score = 154 bits (390), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 110/428 (25%), Positives = 198/428 (46%), Gaps = 26/428 (6%)
Query: 30 NWRRLMNQIEEVGSAV-AVLRSERTRGQPL-PKDLVLGTLVRLKQLKKWNVVS--EVLEW 85
+ LMN + G V AV +R L P + GT+V KK + VS +L
Sbjct: 186 TFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVD-GMCKKGDTVSALNLLRK 244
Query: 86 LRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGG 145
+ S N + + +I + K G + A+ + + M +KG P + ++ +++ + G
Sbjct: 245 MEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSG 304
Query: 146 RYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSP--LKPD 203
R+ +AE + + M P +TY ++ FV+ KF EAEE++ +E P + P+
Sbjct: 305 RWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELY-----DEMLPRGIIPN 359
Query: 204 QKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVS---KIYD 260
+ MI + K + A +F LMA +G + +T+N+L+ K + ++
Sbjct: 360 TITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLH 419
Query: 261 QMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISG 320
+M GL D +Y LI+ + AL + +EM+ +G+ P + LLD +G
Sbjct: 420 EMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNG 479
Query: 321 MVDQARTVFKCMRRDR-----------CSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQ 369
+ A +FK M++ + PD+ +Y ++S +N AE+ + +
Sbjct: 480 KLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPH 539
Query: 370 DGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDS 429
G VP+ ITY ++I G K + L++ +++D M PN FTT+++ Y K D
Sbjct: 540 RGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDD 599
Query: 430 AVVWYKEM 437
+ + EM
Sbjct: 600 GLELFCEM 607
Score = 151 bits (382), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 116/483 (24%), Positives = 214/483 (44%), Gaps = 55/483 (11%)
Query: 48 LRSERTRGQPLPKDL----VLGTLVRL----------KQLKKWNVVSEVLEW-LRIQSWW 92
L S+ R +PLP + ++G +VR+ +++++ + ++ + + I+ +
Sbjct: 66 LFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFNILIKCFC 125
Query: 93 DFNEMDFLMLITAYGKQGDFNKAEKVLSF----------------------MNKKGYAPS 130
+++ F + + +GK V++F M + P+
Sbjct: 126 SCSKLPFAL--STFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALNLFHQMFETTCRPN 183
Query: 131 VVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFM 190
VV+ T LM R GR A A+ RM G +P+ +TY I+ + A +
Sbjct: 184 VVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLR 243
Query: 191 TLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLM-SFE 249
+ EE S + P+ ++ +I K G + A+ LF M E+G+ TYNS++ F
Sbjct: 244 KM--EEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFC 301
Query: 250 TN--YKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHK 307
++ + + ++ +M + PDVV+Y LINA+ K + EA +++EML G+ P
Sbjct: 302 SSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTI 361
Query: 308 AYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRL 367
Y+ ++D F +D A +F M CSP++ ++ T++ Y A ++ + +
Sbjct: 362 TYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEM 421
Query: 368 KQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDF 427
+ G V + TY TLI G+ V +L +++ +M +G+ P+ T++D N
Sbjct: 422 TETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKL 481
Query: 428 DSAVVWYKEMESC-----------GFPPDQKAKNILLSLAKTADERNEANELLGNFNHPN 476
A+ +K M+ G PD + NIL+S + EA EL H
Sbjct: 482 KDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRG 541
Query: 477 NEP 479
P
Sbjct: 542 IVP 544
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 105/394 (26%), Positives = 191/394 (48%), Gaps = 23/394 (5%)
Query: 77 NVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTA 136
N+ +E+ E + +N M I + G ++ AE++L M ++ +P VV++ A
Sbjct: 276 NLFTEMQEKGIFPDLFTYNSM-----IVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNA 330
Query: 137 LMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEE 196
L+ A+ + G++ AE ++ M G P+ +TY ++ F + N+ AE +F + +
Sbjct: 331 LINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKG 390
Query: 197 KSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVS 256
SP + F+ +I Y A + +L M E G+ T TYN+L+ +++
Sbjct: 391 CSP---NLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLN 447
Query: 257 KIYDQMQR---AGLQPDVVSYALLINAYGKARREEEALAVFEEM------LDA-----GV 302
D +Q +GL PD+V+ L++ + ++AL +F+ M LDA GV
Sbjct: 448 AALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGV 507
Query: 303 RPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEK 362
P + YNIL+ G +A +++ M PD +Y++M+ S ++ A +
Sbjct: 508 EPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQ 567
Query: 363 FFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYG 422
F + F PNV+T+ TLI GY K ++ +E++ +M GI N + T++ +
Sbjct: 568 MFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICGFR 627
Query: 423 KNKDFDSAVVWYKEMESCGFPPDQ-KAKNILLSL 455
K + + A+ ++EM S G PD +N+L L
Sbjct: 628 KVGNINGALDIFQEMISSGVYPDTITIRNMLTGL 661
Score = 135 bits (341), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 82/351 (23%), Positives = 173/351 (49%), Gaps = 17/351 (4%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
LI A+ K+G F +AE++ M +G P+ ++++++++ + + R AE +F M + G
Sbjct: 331 LINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKG 390
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
P+ +T+ ++ + A + + E+ L + ++ L D ++ +I+ + G
Sbjct: 391 CSPNLITFNTLIDGYCGAKRIDDGMEL---LHEMTETGLVADTTTYNTLIHGFYLVGDLN 447
Query: 222 KARKLFALMAERGVQQSTVTYNSLMSFETN---YKEVSKIYDQMQRA-----------GL 267
A L M G+ VT ++L+ + K+ +++ MQ++ G+
Sbjct: 448 AALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGV 507
Query: 268 QPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQART 327
+PDV +Y +LI+ + EA ++EEM G+ P Y+ ++D +D+A
Sbjct: 508 EPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQ 567
Query: 328 VFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYA 387
+F M SP++ ++TT+++ Y A ++ + F + + G V N ITY TLI G+
Sbjct: 568 MFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICGFR 627
Query: 388 KVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEME 438
KV N+ ++I+ +M +G+ P+ ++ ++ AV ++++
Sbjct: 628 KVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRAVAMLEKLQ 678
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 69/325 (21%), Positives = 141/325 (43%), Gaps = 17/325 (5%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + + +I + KQ + AE + M KG +P++++ L++ Y R + +
Sbjct: 359 NTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELL 418
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
M +G TY ++ F A ++ ++ S L PD ++
Sbjct: 419 HEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMI---SSGLCPDIVTCDTLLDGL 475
Query: 215 KKAGGYEKARKLFALMAER-----------GVQQSTVTYNSLMSFETN---YKEVSKIYD 260
G + A ++F +M + GV+ TYN L+S N + E ++Y+
Sbjct: 476 CDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYE 535
Query: 261 QMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISG 320
+M G+ PD ++Y+ +I+ K R +EA +F+ M P + L++ + +G
Sbjct: 536 EMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAG 595
Query: 321 MVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYG 380
VD +F M R + +Y T++ + ++ GA F+ + G P+ IT
Sbjct: 596 RVDDGLELFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISSGVYPDTITIR 655
Query: 381 TLIKGYAKVNNLEKMMEIYDKMRVN 405
++ G L++ + + +K++++
Sbjct: 656 NMLTGLWSKEELKRAVAMLEKLQMS 680
Score = 102 bits (253), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 65/260 (25%), Positives = 118/260 (45%), Gaps = 4/260 (1%)
Query: 214 YKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKE---VSKIYDQMQRAGLQPD 270
+ + G E A LF+ M S V + LM + V +Y +M+R ++ D
Sbjct: 54 FHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCD 113
Query: 271 VVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFK 330
+ S+ +LI + + AL+ F ++ G+ P + LL + V +A +F
Sbjct: 114 IYSFNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALNLFH 173
Query: 331 CMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVN 390
M C P++ ++TT+++ + A R+ +DG P ITYGT++ G K
Sbjct: 174 QMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKG 233
Query: 391 NLEKMMEIYDKM-RVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAK 449
+ + + KM V+ I PN I++ I+D+ K+ A + EM+ G PD
Sbjct: 234 DTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTY 293
Query: 450 NILLSLAKTADERNEANELL 469
N ++ ++ ++A +LL
Sbjct: 294 NSMIVGFCSSGRWSDAEQLL 313
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/171 (18%), Positives = 81/171 (47%), Gaps = 3/171 (1%)
Query: 101 MLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSS 160
+LI+ +G F +AE++ M +G P ++++++++ + R A +F M S
Sbjct: 516 ILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSK 575
Query: 161 GPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGY 220
P+ +T+ ++ + +A + + E+F + + + + + +I ++K G
Sbjct: 576 SFSPNVVTFTTLINGYCKAGRVDDGLELFCEM---GRRGIVANAITYITLICGFRKVGNI 632
Query: 221 EKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSKIYDQMQRAGLQPDV 271
A +F M GV T+T ++++ + +E+ + +++ + D+
Sbjct: 633 NGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRAVAMLEKLQMSMDL 683
>gi|255549482|ref|XP_002515794.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223545122|gb|EEF46633.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 924
Score = 154 bits (390), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 104/417 (24%), Positives = 195/417 (46%), Gaps = 40/417 (9%)
Query: 72 QLKKWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSV 131
Q + W V E ++ S ++ ++++ Y ++GD ++A + M +G P+
Sbjct: 287 QPENWQDVVSAFERIKKPS-----RREYGLMVSYYARRGDMHRARQTFESMRARGIEPTS 341
Query: 132 VSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANK-------FKE 184
+T+L+ AY G + A + R+M+ G S +TY II+ F + FKE
Sbjct: 342 HVYTSLIHAYAVGRDMEEALSCARKMKEEGVEMSLVTYSIIVGGFAKIGNADAADRWFKE 401
Query: 185 AEE--------VFMTLLDEEKSPLKPDQK-----------------MFHMMIYMYKKAGG 219
A++ ++ ++ DQ ++H M+ Y G
Sbjct: 402 AKDRHSHMNAIIYGNMIYAYCQTCNMDQAEALVREMEGEGIDAPIDIYHTMMDGYTMVGN 461
Query: 220 YEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSK---IYDQMQRAGLQPDVVSYAL 276
EK +F + E G S V+Y L++ ++SK + M+ AG++ ++ +Y++
Sbjct: 462 EEKCLTVFERLKECGFAPSVVSYGCLINLYAKVGKISKALEVSKMMESAGIKHNMKTYSM 521
Query: 277 LINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDR 336
LIN + K + A A+FE+++ G++P YN ++ AF G +D+A + K M+++R
Sbjct: 522 LINGFLKLKDWANAFAIFEDVVKDGLKPDVVLYNNIIRAFCGMGTMDRAICMVKEMQKER 581
Query: 337 CSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMM 396
P ++ ++ + A +M+ A F +++ G +P V T+ LI G + +EK +
Sbjct: 582 HRPTSRTFMPIIHGFARAGEMKRALDVFDMMRRSGCIPTVHTFNALILGLVEKRQMEKAI 641
Query: 397 EIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILL 453
EI D+M + G+ PN+ +TTIM Y D A ++ ++ G D LL
Sbjct: 642 EILDEMALAGVSPNEHTYTTIMHGYAALGDTGKAFEYFTKLRDEGLQLDVYTYEALL 698
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 129/458 (28%), Positives = 210/458 (45%), Gaps = 26/458 (5%)
Query: 59 PKDLVLGTLVRL----KQLKKWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNK 114
P + G L+ L ++ K VS+++E I+ N + MLI + K D+
Sbjct: 479 PSVVSYGCLINLYAKVGKISKALEVSKMMESAGIKH----NMKTYSMLINGFLKLKDWAN 534
Query: 115 AEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILK 174
A + + K G P VV + ++ A+ G A + + MQ RP++ T+ I+
Sbjct: 535 AFAIFEDVVKDGLKPDVVLYNNIIRAFCGMGTMDRAICMVKEMQKERHRPTSRTFMPIIH 594
Query: 175 LFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERG 234
F A + K A +VF + +S P F+ +I + EKA ++ MA G
Sbjct: 595 GFARAGEMKRALDVFDMM---RRSGCIPTVHTFNALILGLVEKRQMEKAIEILDEMALAG 651
Query: 235 VQQSTVTYNSLMSFETNYKEVSKIYD---QMQRAGLQPDVVSYALLINAYGKARREEEAL 291
V + TY ++M + K ++ +++ GLQ DV +Y L+ A K+ R + AL
Sbjct: 652 VSPNEHTYTTIMHGYAALGDTGKAFEYFTKLRDEGLQLDVYTYEALLKACCKSGRMQSAL 711
Query: 292 AVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAY 351
AV +EM + YNIL+D +A G V +A + + M++ PDI +YT+ ++A
Sbjct: 712 AVTKEMSAQNIPRNTFVYNILIDGWARRGDVWEAADLMQQMKQGGVKPDIHTYTSFINAC 771
Query: 352 VNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQ 411
A DM A K ++ G PNV TY TLI G+A+ + EK + + +M++ G+KP++
Sbjct: 772 CKAGDMLRASKMMEEMETSGVKPNVKTYTTLIHGWARASLPEKALRCFQEMKLAGLKPDK 831
Query: 412 TIFTTIMDAYGKNKDFDSAVV------WYKEMESCGFPPDQ-KAKNILLSLAKTADERNE 464
++ +M A A V KEM G D A + SL K E
Sbjct: 832 AVYHCLMTALLSRATVTEAYVRPGILSICKEMIESGLIVDMGTAVHWSKSLRKIERTGGE 891
Query: 465 ANELLGNFNHPNNEPGINGLSISVDEEDDDDDDDEDDD 502
E L P+ + SVD + + DD+ D+D
Sbjct: 892 LTEALQKTFPPD-----WNMRHSVDADPESCDDELDND 924
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 63/254 (24%), Positives = 110/254 (43%), Gaps = 32/254 (12%)
Query: 201 KPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSKIYD 260
KP ++ + +M+ Y + G +AR+ F M RG++
Sbjct: 303 KPSRREYGLMVSYYARRGDMHRARQTFESMRARGIE------------------------ 338
Query: 261 QMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISG 320
P Y LI+AY R EEAL+ +M + GV + Y+I++ FA G
Sbjct: 339 --------PTSHVYTSLIHAYAVGRDMEEALSCARKMKEEGVEMSLVTYSIIVGGFAKIG 390
Query: 321 MVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYG 380
D A FK + + Y M+ AY +M+ AE R ++ +G + Y
Sbjct: 391 NADAADRWFKEAKDRHSHMNAIIYGNMIYAYCQTCNMDQAEALVREMEGEGIDAPIDIYH 450
Query: 381 TLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESC 440
T++ GY V N EK + ++++++ G P+ + +++ Y K A+ K MES
Sbjct: 451 TMMDGYTMVGNEEKCLTVFERLKECGFAPSVVSYGCLINLYAKVGKISKALEVSKMMESA 510
Query: 441 GFPPDQKAKNILLS 454
G + K ++L++
Sbjct: 511 GIKHNMKTYSMLIN 524
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 46/218 (21%), Positives = 105/218 (48%), Gaps = 4/218 (1%)
Query: 251 NYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYN 310
N+++V ++++++ P Y L+++ Y + A FE M G+ PT Y
Sbjct: 290 NWQDVVSAFERIKK----PSRREYGLMVSYYARRGDMHRARQTFESMRARGIEPTSHVYT 345
Query: 311 ILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQD 370
L+ A+A+ +++A + + M+ + + +Y+ ++ + + + A+++F+ K
Sbjct: 346 SLIHAYAVGRDMEEALSCARKMKEEGVEMSLVTYSIIVGGFAKIGNADAADRWFKEAKDR 405
Query: 371 GFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSA 430
N I YG +I Y + N+++ + +M GI I+ T+MD Y + +
Sbjct: 406 HSHMNAIIYGNMIYAYCQTCNMDQAEALVREMEGEGIDAPIDIYHTMMDGYTMVGNEEKC 465
Query: 431 VVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANEL 468
+ ++ ++ CGF P + L++L + ++A E+
Sbjct: 466 LTVFERLKECGFAPSVVSYGCLINLYAKVGKISKALEV 503
>gi|299471045|emb|CBN78905.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 755
Score = 154 bits (390), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 97/348 (27%), Positives = 168/348 (48%), Gaps = 6/348 (1%)
Query: 98 DFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRM 157
F I A K G + +A ++L M K P +S+ + +EA G+GG+++ A + R+M
Sbjct: 392 SFNSAIAACTKSGRWKEALELLKEMPAKRLKPDAISYNSAIEACGKGGQWEMALELRRQM 451
Query: 158 QSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKA 217
+ G P+ ++ I ++ E +++E E+ + + L P+ ++ I K
Sbjct: 452 PTKGLTPNVISSNIAIRACGERGRWQEGLELLRQMPAQG---LTPNVITYNSAIKTCGKG 508
Query: 218 GGYEKARKLFALMAERGVQQSTVTYNSLM---SFETNYKEVSKIYDQMQRAGLQPDVVSY 274
G +EKA L A M E + ++TYNS + S +KE + +M GL PDV+SY
Sbjct: 509 GQWEKALDLLAKMKELAMTPDSITYNSAIAACSKRGRWKEAVALLREMPGQGLTPDVISY 568
Query: 275 ALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRR 334
I+AYGK + E A+ + +M G+ P YN ++ A G ++A + K ++
Sbjct: 569 TAAIDAYGKNGQWERAVELLRQMPTKGLTPNVITYNSVIKACGRGGEWEKALDLLKELKE 628
Query: 335 DRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEK 394
+PD+ SY +SA E A R + +G P+VI+Y + I+ EK
Sbjct: 629 TAVAPDLMSYNLAISACGKRGRWEEALDLLREMPAEGLTPDVISYTSAIRACNAEGEWEK 688
Query: 395 MMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGF 442
+ + + M +G+ P T ++ ++A GK + AV +EM G
Sbjct: 689 ALGLLNLMGAHGVSPTATSYSLAIEACGKGGRREEAVCLVREMAQRGL 736
Score = 152 bits (384), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 99/372 (26%), Positives = 175/372 (47%), Gaps = 8/372 (2%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
+IT GK+G + +A VL+ M+ KG P +S+ + A GR GR+K A + R+M+S G
Sbjct: 256 VITGCGKEGQWKEALSVLTEMSAKGLTPETISYNMAIRACGRSGRWKEAVEVLRQMESQG 315
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKS-PLKPDQKMFHMMIYMYKKAGGY 220
P ++Y +K ++ E + LLDE + P+ F+ I K G +
Sbjct: 316 VTPDVISYDAAIKACGGGGQW----ETSVDLLDEMAGRGVAPNTIHFNSAIVACGKGGQW 371
Query: 221 EKARKLFALMAERGVQQSTVTYNSLMSFETN---YKEVSKIYDQMQRAGLQPDVVSYALL 277
EKA +L + G+ ++NS ++ T +KE ++ +M L+PD +SY
Sbjct: 372 EKAVELLREVTALGLTPDATSFNSAIAACTKSGRWKEALELLKEMPAKRLKPDAISYNSA 431
Query: 278 INAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRC 337
I A GK + E AL + +M G+ P + NI + A G + + + M
Sbjct: 432 IEACGKGGQWEMALELRRQMPTKGLTPNVISSNIAIRACGERGRWQEGLELLRQMPAQGL 491
Query: 338 SPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMME 397
+P++ +Y + + E A ++K+ P+ ITY + I +K ++ +
Sbjct: 492 TPNVITYNSAIKTCGKGGQWEKALDLLAKMKELAMTPDSITYNSAIAACSKRGRWKEAVA 551
Query: 398 IYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAK 457
+ +M G+ P+ +T +DAYGKN ++ AV ++M + G P+ N ++
Sbjct: 552 LLREMPGQGLTPDVISYTAAIDAYGKNGQWERAVELLRQMPTKGLTPNVITYNSVIKACG 611
Query: 458 TADERNEANELL 469
E +A +LL
Sbjct: 612 RGGEWEKALDLL 623
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 88/346 (25%), Positives = 165/346 (47%), Gaps = 6/346 (1%)
Query: 103 ITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGP 162
I A G G + + +L M +G AP+ + + + A G+GG+++ A + R + + G
Sbjct: 327 IKACGGGGQWETSVDLLDEMAGRGVAPNTIHFNSAIVACGKGGQWEKAVELLREVTALGL 386
Query: 163 RPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEK 222
P A ++ + ++ ++KEA E+ + + LKPD ++ I K G +E
Sbjct: 387 TPDATSFNSAIAACTKSGRWKEALELLKEMPAKR---LKPDAISYNSAIEACGKGGQWEM 443
Query: 223 ARKLFALMAERGVQQSTVTYNSLMSF---ETNYKEVSKIYDQMQRAGLQPDVVSYALLIN 279
A +L M +G+ + ++ N + ++E ++ QM GL P+V++Y I
Sbjct: 444 ALELRRQMPTKGLTPNVISSNIAIRACGERGRWQEGLELLRQMPAQGLTPNVITYNSAIK 503
Query: 280 AYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSP 339
GK + E+AL + +M + + P YN + A + G +A + + M +P
Sbjct: 504 TCGKGGQWEKALDLLAKMKELAMTPDSITYNSAIAACSKRGRWKEAVALLREMPGQGLTP 563
Query: 340 DICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIY 399
D+ SYT + AY E A + R++ G PNVITY ++IK + EK +++
Sbjct: 564 DVISYTAAIDAYGKNGQWERAVELLRQMPTKGLTPNVITYNSVIKACGRGGEWEKALDLL 623
Query: 400 DKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPD 445
+++ + P+ + + A GK ++ A+ +EM + G PD
Sbjct: 624 KELKETAVAPDLMSYNLAISACGKRGRWEEALDLLREMPAEGLTPD 669
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 89/390 (22%), Positives = 171/390 (43%), Gaps = 6/390 (1%)
Query: 103 ITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGP 162
I A G + A +L M + P +S+ + ++A GRGG+++ + R M S G
Sbjct: 187 IEACGSGDQWEIAVSLLREMADREVVPDEISYNSAIKACGRGGQWERVIGLLREMPSVGL 246
Query: 163 RPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEK 222
P A+TY ++ + ++KEA V L + L P+ ++M I ++G +++
Sbjct: 247 TPDAITYNSVITGCGKEGQWKEALSV---LTEMSAKGLTPETISYNMAIRACGRSGRWKE 303
Query: 223 ARKLFALMAERGVQQSTVTYNSLM---SFETNYKEVSKIYDQMQRAGLQPDVVSYALLIN 279
A ++ M +GV ++Y++ + ++ + D+M G+ P+ + + I
Sbjct: 304 AVEVLRQMESQGVTPDVISYDAAIKACGGGGQWETSVDLLDEMAGRGVAPNTIHFNSAIV 363
Query: 280 AYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSP 339
A GK + E+A+ + E+ G+ P ++N + A SG +A + K M R P
Sbjct: 364 ACGKGGQWEKAVELLREVTALGLTPDATSFNSAIAACTKSGRWKEALELLKEMPAKRLKP 423
Query: 340 DICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIY 399
D SY + + A E A + R++ G PNVI+ I+ + ++ +E+
Sbjct: 424 DAISYNSAIEACGKGGQWEMALELRRQMPTKGLTPNVISSNIAIRACGERGRWQEGLELL 483
Query: 400 DKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTA 459
+M G+ PN + + + GK ++ A+ +M+ PD N ++
Sbjct: 484 RQMPAQGLTPNVITYNSAIKTCGKGGQWEKALDLLAKMKELAMTPDSITYNSAIAACSKR 543
Query: 460 DERNEANELLGNFNHPNNEPGINGLSISVD 489
EA LL P + + ++D
Sbjct: 544 GRWKEAVALLREMPGQGLTPDVISYTAAID 573
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 83/378 (21%), Positives = 172/378 (45%), Gaps = 6/378 (1%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + F I A GK G + KA ++L + G P S + + A + GR+K A +
Sbjct: 354 NTIHFNSAIVACGKGGQWEKAVELLREVTALGLTPDATSFNSAIAACTKSGRWKEALELL 413
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
+ M + +P A++Y ++ + +++ A E+ + + L P+ ++ I
Sbjct: 414 KEMPAKRLKPDAISYNSAIEACGKGGQWEMALELRRQMPTKG---LTPNVISSNIAIRAC 470
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSKIYD---QMQRAGLQPDV 271
+ G +++ +L M +G+ + +TYNS + + K D +M+ + PD
Sbjct: 471 GERGRWQEGLELLRQMPAQGLTPNVITYNSAIKTCGKGGQWEKALDLLAKMKELAMTPDS 530
Query: 272 VSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKC 331
++Y I A K R +EA+A+ EM G+ P +Y +DA+ +G ++A + +
Sbjct: 531 ITYNSAIAACSKRGRWKEAVALLREMPGQGLTPDVISYTAAIDAYGKNGQWERAVELLRQ 590
Query: 332 MRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNN 391
M +P++ +Y +++ A + E A + LK+ P++++Y I K
Sbjct: 591 MPTKGLTPNVITYNSVIKACGRGGEWEKALDLLKELKETAVAPDLMSYNLAISACGKRGR 650
Query: 392 LEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNI 451
E+ +++ +M G+ P+ +T+ + A +++ A+ M + G P + ++
Sbjct: 651 WEEALDLLREMPAEGLTPDVISYTSAIRACNAEGEWEKALGLLNLMGAHGVSPTATSYSL 710
Query: 452 LLSLAKTADERNEANELL 469
+ R EA L+
Sbjct: 711 AIEACGKGGRREEAVCLV 728
Score = 116 bits (290), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 81/364 (22%), Positives = 162/364 (44%), Gaps = 8/364 (2%)
Query: 110 GDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRM-QSSGPRPSALT 168
G + +A +L M K+G S+T + GR G+++ A + R + + G P+
Sbjct: 124 GKWREALGILDEM-KEGGVVCAHSYTTAITTCGRQGQWEKALELLREIPEQEGVSPNVFC 182
Query: 169 YQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFA 228
Y ++ ++++ A + + D E + PD+ ++ I + G +E+ L
Sbjct: 183 YNSAIEACGSGDQWEIAVSLLREMADRE---VVPDEISYNSAIKACGRGGQWERVIGLLR 239
Query: 229 LMAERGVQQSTVTYNSLMSF---ETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKAR 285
M G+ +TYNS+++ E +KE + +M GL P+ +SY + I A G++
Sbjct: 240 EMPSVGLTPDAITYNSVITGCGKEGQWKEALSVLTEMSAKGLTPETISYNMAIRACGRSG 299
Query: 286 REEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYT 345
R +EA+ V +M GV P +Y+ + A G + + + M +P+ +
Sbjct: 300 RWKEAVEVLRQMESQGVTPDVISYDAAIKACGGGGQWETSVDLLDEMAGRGVAPNTIHFN 359
Query: 346 TMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVN 405
+ + A E A + R + G P+ ++ + I K ++ +E+ +M
Sbjct: 360 SAIVACGKGGQWEKAVELLREVTALGLTPDATSFNSAIAACTKSGRWKEALELLKEMPAK 419
Query: 406 GIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEA 465
+KP+ + + ++A GK ++ A+ ++M + G P+ + NI + E
Sbjct: 420 RLKPDAISYNSAIEACGKGGQWEMALELRRQMPTKGLTPNVISSNIAIRACGERGRWQEG 479
Query: 466 NELL 469
ELL
Sbjct: 480 LELL 483
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 75/304 (24%), Positives = 131/304 (43%), Gaps = 8/304 (2%)
Query: 170 QIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFAL 229
Q L+ K++EA + +LDE K + I + G +EKA +L
Sbjct: 114 QAALREAATTGKWREA----LGILDEMKEGGVVCAHSYTTAITTCGRQGQWEKALELLRE 169
Query: 230 MAER-GVQQSTVTYNSLMSFETN---YKEVSKIYDQMQRAGLQPDVVSYALLINAYGKAR 285
+ E+ GV + YNS + + ++ + +M + PD +SY I A G+
Sbjct: 170 IPEQEGVSPNVFCYNSAIEACGSGDQWEIAVSLLREMADREVVPDEISYNSAIKACGRGG 229
Query: 286 REEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYT 345
+ E + + EM G+ P YN ++ G +A +V M +P+ SY
Sbjct: 230 QWERVIGLLREMPSVGLTPDAITYNSVITGCGKEGQWKEALSVLTEMSAKGLTPETISYN 289
Query: 346 TMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVN 405
+ A + + A + R+++ G P+VI+Y IK E +++ D+M
Sbjct: 290 MAIRACGRSGRWKEAVEVLRQMESQGVTPDVISYDAAIKACGGGGQWETSVDLLDEMAGR 349
Query: 406 GIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEA 465
G+ PN F + + A GK ++ AV +E+ + G PD + N ++ + EA
Sbjct: 350 GVAPNTIHFNSAIVACGKGGQWEKAVELLREVTALGLTPDATSFNSAIAACTKSGRWKEA 409
Query: 466 NELL 469
ELL
Sbjct: 410 LELL 413
>gi|42570531|ref|NP_850859.2| SNF1-like protein kinase [Arabidopsis thaliana]
gi|75160582|sp|Q8S9D1.1|PP395_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g21222; AltName: Full=SNF1-like protein kinase AtC401
gi|19071860|dbj|BAB85674.1| SNF1-like protein kinase [Arabidopsis thaliana]
gi|332005563|gb|AED92946.1| SNF1-like protein kinase [Arabidopsis thaliana]
Length = 831
Score = 154 bits (390), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 102/357 (28%), Positives = 175/357 (49%), Gaps = 10/357 (2%)
Query: 131 VVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFM 190
V S T LM GR + A +IF + G +PS +TY ++ F +
Sbjct: 319 VRSRTKLMNGLIERGRPQEAHSIFNTLIEEGHKPSLITYTTLVTALTRQKHFHS----LL 374
Query: 191 TLLDE-EKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFE 249
+L+ + EK+ LKPD +F+ +I ++G ++A K+F M E G + + T+N+L+
Sbjct: 375 SLISKVEKNGLKPDTILFNAIINASSESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGY 434
Query: 250 ---TNYKEVSKIYDQMQR-AGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPT 305
+E S++ D M R LQP+ + +L+ A+ R+ EEA + +M GV+P
Sbjct: 435 GKIGKLEESSRLLDMMLRDEMLQPNDRTCNILVQAWCNQRKIEEAWNIVYKMQSYGVKPD 494
Query: 306 HKAYNILLDAFAISGMVDQAR-TVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFF 364
+N L A+A G A + M ++ P++ + T+++ Y ME A +FF
Sbjct: 495 VVTFNTLAKAYARIGSTCTAEDMIIPRMLHNKVKPNVRTCGTIVNGYCEEGKMEEALRFF 554
Query: 365 RRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKN 424
R+K+ G PN+ + +LIKG+ +N+++ + E+ D M G+KP+ F+T+M+A+
Sbjct: 555 YRMKELGVHPNLFVFNSLIKGFLNINDMDGVGEVVDLMEEFGVKPDVVTFSTLMNAWSSV 614
Query: 425 KDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGI 481
D Y +M G PD A +IL A E +A ++L P +
Sbjct: 615 GDMKRCEEIYTDMLEGGIDPDIHAFSILAKGYARAGEPEKAEQILNQMRKFGVRPNV 671
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 97/388 (25%), Positives = 182/388 (46%), Gaps = 7/388 (1%)
Query: 97 MDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRR 156
+ + L+TA +Q F+ ++S + K G P + A++ A G A IF +
Sbjct: 355 ITYTTLVTALTRQKHFHSLLSLISKVEKNGLKPDTILFNAIINASSESGNLDQAMKIFEK 414
Query: 157 MQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKK 216
M+ SG +P+A T+ ++K + + K +E+ + +L +E L+P+ + ++++ +
Sbjct: 415 MKESGCKPTASTFNTLIKGYGKIGKLEESSRLLDMMLRDEM--LQPNDRTCNILVQAWCN 472
Query: 217 AGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSK----IYDQMQRAGLQPDVV 272
E+A + M GV+ VT+N+L I +M ++P+V
Sbjct: 473 QRKIEEAWNIVYKMQSYGVKPDVVTFNTLAKAYARIGSTCTAEDMIIPRMLHNKVKPNVR 532
Query: 273 SYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCM 332
+ ++N Y + + EEAL F M + GV P +N L+ F +D V M
Sbjct: 533 TCGTIVNGYCEEGKMEEALRFFYRMKELGVHPNLFVFNSLIKGFLNINDMDGVGEVVDLM 592
Query: 333 RRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNL 392
PD+ +++T+++A+ + DM+ E+ + + + G P++ + L KGYA+
Sbjct: 593 EEFGVKPDVVTFSTLMNAWSSVGDMKRCEEIYTDMLEGGIDPDIHAFSILAKGYARAGEP 652
Query: 393 EKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMES-CGFPPDQKAKNI 451
EK +I ++MR G++PN I+T I+ + + A+ YK+M G P+
Sbjct: 653 EKAEQILNQMRKFGVRPNVVIYTQIISGWCSAGEMKKAMQVYKKMCGIVGLSPNLTTYET 712
Query: 452 LLSLAKTADERNEANELLGNFNHPNNEP 479
L+ A + +A ELL + N P
Sbjct: 713 LIWGFGEAKQPWKAEELLKDMEGKNVVP 740
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 88/331 (26%), Positives = 167/331 (50%), Gaps = 13/331 (3%)
Query: 99 FLMLITAYGKQGDFNKAEKVLSFMNK-KGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRM 157
F LI YGK G ++ ++L M + + P+ + L++A+ + + A I +M
Sbjct: 427 FNTLIKGYGKIGKLEESSRLLDMMLRDEMLQPNDRTCNILVQAWCNQRKIEEAWNIVYKM 486
Query: 158 QSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKA 217
QS G +P +T+ + K + AE++ + + K +KP+ + ++ Y +
Sbjct: 487 QSYGVKPDVVTFNTLAKAYARIGSTCTAEDMIIPRMLHNK--VKPNVRTCGTIVNGYCEE 544
Query: 218 GGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKE---VSKIYDQMQRAGLQPDVVSY 274
G E+A + F M E GV + +NSL+ N + V ++ D M+ G++PDVV++
Sbjct: 545 GKMEEALRFFYRMKELGVHPNLFVFNSLIKGFLNINDMDGVGEVVDLMEEFGVKPDVVTF 604
Query: 275 ALLINAY---GKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKC 331
+ L+NA+ G +R EE ++ +ML+ G+ P A++IL +A +G ++A +
Sbjct: 605 STLMNAWSSVGDMKRCEE---IYTDMLEGGIDPDIHAFSILAKGYARAGEPEKAEQILNQ 661
Query: 332 MRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQD-GFVPNVITYGTLIKGYAKVN 390
MR+ P++ YT ++S + +A +M+ A + ++++ G PN+ TY TLI G+ +
Sbjct: 662 MRKFGVRPNVVIYTQIISGWCSAGEMKKAMQVYKKMCGIVGLSPNLTTYETLIWGFGEAK 721
Query: 391 NLEKMMEIYDKMRVNGIKPNQTIFTTIMDAY 421
K E+ M + P + I D +
Sbjct: 722 QPWKAEELLKDMEGKNVVPTRKTMQLIADGW 752
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 87/184 (47%), Gaps = 1/184 (0%)
Query: 270 DVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVF 329
DV S L+N + R +EA ++F +++ G +P+ Y L+ A ++
Sbjct: 318 DVRSRTKLMNGLIERGRPQEAHSIFNTLIEEGHKPSLITYTTLVTALTRQKHFHSLLSLI 377
Query: 330 KCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKV 389
+ ++ PD + +++A + +++ A K F ++K+ G P T+ TLIKGY K+
Sbjct: 378 SKVEKNGLKPDTILFNAIINASSESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYGKI 437
Query: 390 NNLEKMMEIYDKM-RVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKA 448
LE+ + D M R ++PN ++ A+ + + A +M+S G PD
Sbjct: 438 GKLEESSRLLDMMLRDEMLQPNDRTCNILVQAWCNQRKIEEAWNIVYKMQSYGVKPDVVT 497
Query: 449 KNIL 452
N L
Sbjct: 498 FNTL 501
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/224 (22%), Positives = 105/224 (46%), Gaps = 7/224 (3%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
++ Y ++G +A + M + G P++ +L++ + + M+ G
Sbjct: 537 IVNGYCEEGKMEEALRFFYRMKELGVHPNLFVFNSLIKGFLNINDMDGVGEVVDLMEEFG 596
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
+P +T+ ++ + K EE++ +L+ + PD F ++ Y +AG E
Sbjct: 597 VKPDVVTFSTLMNAWSSVGDMKRCEEIYTDMLE---GGIDPDIHAFSILAKGYARAGEPE 653
Query: 222 KARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSK---IYDQMQR-AGLQPDVVSYALL 277
KA ++ M + GV+ + V Y ++S + E+ K +Y +M GL P++ +Y L
Sbjct: 654 KAEQILNQMRKFGVRPNVVIYTQIISGWCSAGEMKKAMQVYKKMCGIVGLSPNLTTYETL 713
Query: 278 INAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGM 321
I +G+A++ +A + ++M V PT K ++ D + G+
Sbjct: 714 IWGFGEAKQPWKAEELLKDMEGKNVVPTRKTMQLIADGWKSIGV 757
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/139 (23%), Positives = 67/139 (48%), Gaps = 1/139 (0%)
Query: 331 CMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVN 390
C C D+ S T +++ + + A F L ++G P++ITY TL+ +
Sbjct: 310 CSGGTTCG-DVRSRTKLMNGLIERGRPQEAHSIFNTLIEEGHKPSLITYTTLVTALTRQK 368
Query: 391 NLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKN 450
+ ++ + K+ NG+KP+ +F I++A ++ + D A+ +++M+ G P N
Sbjct: 369 HFHSLLSLISKVEKNGLKPDTILFNAIINASSESGNLDQAMKIFEKMKESGCKPTASTFN 428
Query: 451 ILLSLAKTADERNEANELL 469
L+ + E++ LL
Sbjct: 429 TLIKGYGKIGKLEESSRLL 447
>gi|262316881|emb|CAZ44330.1| homologue to restoring pentatricopeptide repeat protein [Raphanus
sativus]
Length = 686
Score = 154 bits (390), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 100/365 (27%), Positives = 167/365 (45%), Gaps = 16/365 (4%)
Query: 129 PSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEV 188
P+VV+ T LM R GR A A+ RM G +P+ +TY I+ + A +
Sbjct: 180 PNVVTFTTLMNGLCREGRVVEAVALLDRMLEDGLQPNQITYGTIVDGMCKMGDTVSALNL 239
Query: 189 FMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLM-- 246
+ EE S + P+ +++ +I K G + A LF M E+ + VTYN ++
Sbjct: 240 LRKM--EEVSHIIPNVVIYNTIIDGLWKDGRHSDAHNLFIEMQEKEIFPDIVTYNCMING 297
Query: 247 -SFETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPT 305
+ + ++ +M + PDVV+++ LINA+ K + EA +++EML + P+
Sbjct: 298 FCISGRWSDAEQLLQEMLERKINPDVVTFSALINAFVKEGKFFEAEELYDEMLPRSIIPS 357
Query: 306 HKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFR 365
Y+ ++D F +D A +F CSPDI ++ T+++ Y A ++ K
Sbjct: 358 TVTYSSMIDGFCKQNRLDAAEHMFYLTPTKGCSPDIITFNTLIAGYCRAKRVDDGIKLLH 417
Query: 366 RLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNK 425
+ + G V N ITY TLI G+ +V +L ++ +M +G+ PN T++D N
Sbjct: 418 EMTEAGLVANTITYTTLIHGFCQVGDLNAAQDLLQEMISSGVCPNVVTCNTLLDGLCDNG 477
Query: 426 DFDSAVVWYKEMESC-----------GFPPDQKAKNILLSLAKTADERNEANELLGNFNH 474
A+ +K M+ G PD + NIL+ + EA EL H
Sbjct: 478 KLKDALEMFKAMQKSKMDIDASRPFNGVEPDVQTYNILICGLINEGKFLEAEELYEEMPH 537
Query: 475 PNNEP 479
P
Sbjct: 538 RGIVP 542
Score = 145 bits (366), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 107/443 (24%), Positives = 190/443 (42%), Gaps = 40/443 (9%)
Query: 30 NWRRLMNQIEEVGSAV-AVLRSERTRGQPL-PKDLVLGTLV-----------RLKQLKKW 76
+ LMN + G V AV +R L P + GT+V L L+K
Sbjct: 184 TFTTLMNGLCREGRVVEAVALLDRMLEDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKM 243
Query: 77 NVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTA 136
VS ++ N + + +I K G + A + M +K P +V++
Sbjct: 244 EEVSHIIP----------NVVIYNTIIDGLWKDGRHSDAHNLFIEMQEKEIFPDIVTYNC 293
Query: 137 LMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEE 196
++ + GR+ +AE + + M P +T+ ++ FV+ KF EAEE++ +L
Sbjct: 294 MINGFCISGRWSDAEQLLQEMLERKINPDVVTFSALINAFVKEGKFFEAEELYDEMLPRS 353
Query: 197 KSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVS 256
+ P + MI + K + A +F L +G +T+N+L++ K V
Sbjct: 354 ---IIPSTVTYSSMIDGFCKQNRLDAAEHMFYLTPTKGCSPDIITFNTLIAGYCRAKRVD 410
Query: 257 ---KIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILL 313
K+ +M AGL + ++Y LI+ + + A + +EM+ +GV P N LL
Sbjct: 411 DGIKLLHEMTEAGLVANTITYTTLIHGFCQVGDLNAAQDLLQEMISSGVCPNVVTCNTLL 470
Query: 314 DAFAISGMVDQARTVFKCMRRDR-----------CSPDICSYTTMLSAYVNASDMEGAEK 362
D +G + A +FK M++ + PD+ +Y ++ +N AE+
Sbjct: 471 DGLCDNGKLKDALEMFKAMQKSKMDIDASRPFNGVEPDVQTYNILICGLINEGKFLEAEE 530
Query: 363 FFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYG 422
+ + G VP+ ITY ++I G K + L++ +++D M P+ F T++ Y
Sbjct: 531 LYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPDVVTFNTLITGYC 590
Query: 423 KNKDFDSAVVWYKEMESCGFPPD 445
K D + + EM G D
Sbjct: 591 KAGMVDDGLELFCEMGQRGIVAD 613
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 99/369 (26%), Positives = 181/369 (49%), Gaps = 18/369 (4%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
+I + G ++ AE++L M ++ P VV+ +AL+ A+ + G++ AE ++ M
Sbjct: 294 MINGFCISGRWSDAEQLLQEMLERKINPDVVTFSALINAFVKEGKFFEAEELYDEMLPRS 353
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
PS +TY ++ F + N+ AE +F L K PD F+ +I Y +A +
Sbjct: 354 IIPSTVTYSSMIDGFCKQNRLDAAEHMF--YLTPTKG-CSPDIITFNTLIAGYCRAKRVD 410
Query: 222 KARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSKIYDQMQR---AGLQPDVVSYALLI 278
KL M E G+ +T+TY +L+ +++ D +Q +G+ P+VV+ L+
Sbjct: 411 DGIKLLHEMTEAGLVANTITYTTLIHGFCQVGDLNAAQDLLQEMISSGVCPNVVTCNTLL 470
Query: 279 NAYGKARREEEALAVFEEM------LDA-----GVRPTHKAYNILLDAFAISGMVDQART 327
+ + ++AL +F+ M +DA GV P + YNIL+ G +A
Sbjct: 471 DGLCDNGKLKDALEMFKAMQKSKMDIDASRPFNGVEPDVQTYNILICGLINEGKFLEAEE 530
Query: 328 VFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYA 387
+++ M PD +Y++M+ S ++ A + F + F P+V+T+ TLI GY
Sbjct: 531 LYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPDVVTFNTLITGYC 590
Query: 388 KVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQ- 446
K ++ +E++ +M GI + + T++ + K + D A+ ++EM S G PD
Sbjct: 591 KAGMVDDGLELFCEMGQRGIVADAITYITLIYGFRKVDNIDGALDIFQEMISSGVYPDTI 650
Query: 447 KAKNILLSL 455
+N+L L
Sbjct: 651 TIRNMLTGL 659
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 85/355 (23%), Positives = 174/355 (49%), Gaps = 19/355 (5%)
Query: 99 FLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQ 158
F LI A+ K+G F +AE++ M + PS V+++++++ + + R AE +F
Sbjct: 326 FSALINAFVKEGKFFEAEELYDEMLPRSIIPSTVTYSSMIDGFCKQNRLDAAEHMFYLTP 385
Query: 159 SSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDE-EKSPLKPDQKMFHMMIYMYKKA 217
+ G P +T+ ++ + A + + + LL E ++ L + + +I+ + +
Sbjct: 386 TKGCSPDIITFNTLIAGYCRAKRVDDG----IKLLHEMTEAGLVANTITYTTLIHGFCQV 441
Query: 218 GGYEKARKLFALMAERGVQQSTVTYNSLMSFETN---YKEVSKIYDQMQRA--------- 265
G A+ L M GV + VT N+L+ + K+ +++ MQ++
Sbjct: 442 GDLNAAQDLLQEMISSGVCPNVVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDIDASRP 501
Query: 266 --GLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVD 323
G++PDV +Y +LI + EA ++EEM G+ P Y+ ++D +D
Sbjct: 502 FNGVEPDVQTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLD 561
Query: 324 QARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLI 383
+A +F M SPD+ ++ T+++ Y A ++ + F + Q G V + ITY TLI
Sbjct: 562 EATQMFDSMGSKSFSPDVVTFNTLITGYCKAGMVDDGLELFCEMGQRGIVADAITYITLI 621
Query: 384 KGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEME 438
G+ KV+N++ ++I+ +M +G+ P+ ++ ++ + AV ++++
Sbjct: 622 YGFRKVDNIDGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELERAVAMLEDLQ 676
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 74/341 (21%), Positives = 150/341 (43%), Gaps = 11/341 (3%)
Query: 133 SHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTL 192
S T LM+ + + A + F ++ G P+ +T+ +L ++ EA ++F +
Sbjct: 118 SFTILMKCFCSCSKLPFALSTFGKITKLGFHPTVVTFNTLLHGLCVEDRISEALDLFHQM 177
Query: 193 LDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNY 252
KP+ F ++ + G +A L M E G+Q + +TY +++
Sbjct: 178 C-------KPNVVTFTTLMNGLCREGRVVEAVALLDRMLEDGLQPNQITYGTIVDGMCKM 230
Query: 253 KEVSKIYDQMQR----AGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKA 308
+ + +++ + + P+VV Y +I+ K R +A +F EM + + P
Sbjct: 231 GDTVSALNLLRKMEEVSHIIPNVVIYNTIIDGLWKDGRHSDAHNLFIEMQEKEIFPDIVT 290
Query: 309 YNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLK 368
YN +++ F ISG A + + M + +PD+ +++ +++A+V AE+ + +
Sbjct: 291 YNCMINGFCISGRWSDAEQLLQEMLERKINPDVVTFSALINAFVKEGKFFEAEELYDEML 350
Query: 369 QDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFD 428
+P+ +TY ++I G+ K N L+ ++ G P+ F T++ Y + K D
Sbjct: 351 PRSIIPSTVTYSSMIDGFCKQNRLDAAEHMFYLTPTKGCSPDIITFNTLIAGYCRAKRVD 410
Query: 429 SAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELL 469
+ EM G + L+ + N A +LL
Sbjct: 411 DGIKLLHEMTEAGLVANTITYTTLIHGFCQVGDLNAAQDLL 451
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 69/318 (21%), Positives = 141/318 (44%), Gaps = 17/318 (5%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
+I + KQ + AE + KG +P +++ L+ Y R R + + M +G
Sbjct: 364 MIDGFCKQNRLDAAEHMFYLTPTKGCSPDIITFNTLIAGYCRAKRVDDGIKLLHEMTEAG 423
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
+ +TY ++ F + A+++ ++ S + P+ + ++ G +
Sbjct: 424 LVANTITYTTLIHGFCQVGDLNAAQDLLQEMI---SSGVCPNVVTCNTLLDGLCDNGKLK 480
Query: 222 KARKLFALM--------AER---GVQQSTVTYNSLMSFETN---YKEVSKIYDQMQRAGL 267
A ++F M A R GV+ TYN L+ N + E ++Y++M G+
Sbjct: 481 DALEMFKAMQKSKMDIDASRPFNGVEPDVQTYNILICGLINEGKFLEAEELYEEMPHRGI 540
Query: 268 QPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQART 327
PD ++Y+ +I+ K R +EA +F+ M P +N L+ + +GMVD
Sbjct: 541 VPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPDVVTFNTLITGYCKAGMVDDGLE 600
Query: 328 VFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYA 387
+F M + D +Y T++ + +++GA F+ + G P+ IT ++ G
Sbjct: 601 LFCEMGQRGIVADAITYITLIYGFRKVDNIDGALDIFQEMISSGVYPDTITIRNMLTGLW 660
Query: 388 KVNNLEKMMEIYDKMRVN 405
LE+ + + + ++++
Sbjct: 661 SKEELERAVAMLEDLQMS 678
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/260 (23%), Positives = 114/260 (43%), Gaps = 8/260 (3%)
Query: 214 YKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKE---VSKIYDQMQRAGLQPD 270
+ + G + A LF M S + + LM V ++ +M+ + +
Sbjct: 56 FHEIKGLDDAIDLFGYMVRSRPLPSVIDFCKLMGVVVRMGRPDVVISLHKKMEMLRMPCN 115
Query: 271 VVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFK 330
S+ +L+ + + AL+ F ++ G PT +N LL + + +A +F
Sbjct: 116 AYSFTILMKCFCSCSKLPFALSTFGKITKLGFHPTVVTFNTLLHGLCVEDRISEALDLFH 175
Query: 331 CMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVN 390
M C P++ ++TT+++ + A R+ +DG PN ITYGT++ G K+
Sbjct: 176 QM----CKPNVVTFTTLMNGLCREGRVVEAVALLDRMLEDGLQPNQITYGTIVDGMCKMG 231
Query: 391 NLEKMMEIYDKM-RVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAK 449
+ + + KM V+ I PN I+ TI+D K+ A + EM+ PD
Sbjct: 232 DTVSALNLLRKMEEVSHIIPNVVIYNTIIDGLWKDGRHSDAHNLFIEMQEKEIFPDIVTY 291
Query: 450 NILLSLAKTADERNEANELL 469
N +++ + ++A +LL
Sbjct: 292 NCMINGFCISGRWSDAEQLL 311
>gi|224123314|ref|XP_002319048.1| predicted protein [Populus trichocarpa]
gi|222857424|gb|EEE94971.1| predicted protein [Populus trichocarpa]
Length = 497
Score = 154 bits (390), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 93/361 (25%), Positives = 174/361 (48%), Gaps = 6/361 (1%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + + +I + K +A + LS M +G +P+VV++++++ + GR A ++F
Sbjct: 116 NVVVYSTIIDSLCKDKLITEAMEFLSEMVNRGISPNVVTYSSILHGFCNLGRSNEATSLF 175
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
++M P +T+ I++ + EA+ VF T++++ ++P+ ++ ++ Y
Sbjct: 176 KQMVERNVMPDTVTFNILVDGLSKEGMILEAQCVFETMIEK---GVEPNVNTYNALMDGY 232
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETN---YKEVSKIYDQMQRAGLQPDV 271
++A+KLF +M +G S +YN L+ E + +M L PD
Sbjct: 233 CSQSQMDEAQKLFNIMVRKGCAPSVRSYNILIKGHCKSGRIDEAKGLLAEMSHKALTPDT 292
Query: 272 VSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKC 331
V+Y+ L+ + + R ++A + EEM G+ P Y+I+LD G +D+A + K
Sbjct: 293 VTYSTLMKGFCQDGRPQDAQKLLEEMRSYGLLPDLMTYSIVLDGLCKQGHLDEAFELLKA 352
Query: 332 MRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNN 391
M+ + P+I YT ++ N +E A + F L G P+V+TY +I G K
Sbjct: 353 MQESKIEPNIFIYTILIQGMCNFGKLEAARELFSNLFVKGIQPDVVTYTVMISGLLKGGL 412
Query: 392 LEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNI 451
+ E++ M V+G PN + I+ + +N D +A +EM GF D +
Sbjct: 413 SNEACELFRDMAVHGCLPNSCTYNVIIQGFLRNGDTSNAGRLIEEMVGRGFSADSSTFQM 472
Query: 452 L 452
L
Sbjct: 473 L 473
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 93/392 (23%), Positives = 171/392 (43%), Gaps = 6/392 (1%)
Query: 93 DFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEA 152
D + L+ + F+ A VL M K G P+ V+ + L+ + +A
Sbjct: 9 DVYTLTILINCFCHSNHDHFHFAFSVLGNMFKLGLQPNHVTFSTLLNGLSSKAKIIDAVK 68
Query: 153 IFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIY 212
+F M G P +TY I+ + A ++ + EEK KP+ ++ +I
Sbjct: 69 LFDEMVKMGYEPDVITYSTIINGLCKMGSTTMAIQLLKKM--EEKG-CKPNVVVYSTIID 125
Query: 213 MYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNY---KEVSKIYDQMQRAGLQP 269
K +A + + M RG+ + VTY+S++ N E + ++ QM + P
Sbjct: 126 SLCKDKLITEAMEFLSEMVNRGISPNVVTYSSILHGFCNLGRSNEATSLFKQMVERNVMP 185
Query: 270 DVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVF 329
D V++ +L++ K EA VFE M++ GV P YN L+D + +D+A+ +F
Sbjct: 186 DTVTFNILVDGLSKEGMILEAQCVFETMIEKGVEPNVNTYNALMDGYCSQSQMDEAQKLF 245
Query: 330 KCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKV 389
M R C+P + SY ++ + + ++ A+ + P+ +TY TL+KG+ +
Sbjct: 246 NIMVRKGCAPSVRSYNILIKGHCKSGRIDEAKGLLAEMSHKALTPDTVTYSTLMKGFCQD 305
Query: 390 NNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAK 449
+ ++ ++MR G+ P+ ++ ++D K D A K M+ P+
Sbjct: 306 GRPQDAQKLLEEMRSYGLLPDLMTYSIVLDGLCKQGHLDEAFELLKAMQESKIEPNIFIY 365
Query: 450 NILLSLAKTADERNEANELLGNFNHPNNEPGI 481
IL+ + A EL N +P +
Sbjct: 366 TILIQGMCNFGKLEAARELFSNLFVKGIQPDV 397
Score = 135 bits (339), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 90/365 (24%), Positives = 171/365 (46%), Gaps = 8/365 (2%)
Query: 122 MNKKGYAPSVVSHTALMEAYGRGGR--YKNAEAIFRRMQSSGPRPSALTYQIILKLFVEA 179
M+ P V + T L+ + + A ++ M G +P+ +T+ +L
Sbjct: 1 MDLSNIRPDVYTLTILINCFCHSNHDHFHFAFSVLGNMFKLGLQPNHVTFSTLLNGLSSK 60
Query: 180 NKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQST 239
K +A ++F ++ K +PD + +I K G A +L M E+G + +
Sbjct: 61 AKIIDAVKLFDEMV---KMGYEPDVITYSTIINGLCKMGSTTMAIQLLKKMEEKGCKPNV 117
Query: 240 VTYNSLMSFETNYK---EVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEE 296
V Y++++ K E + +M G+ P+VV+Y+ +++ + R EA ++F++
Sbjct: 118 VVYSTIIDSLCKDKLITEAMEFLSEMVNRGISPNVVTYSSILHGFCNLGRSNEATSLFKQ 177
Query: 297 MLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASD 356
M++ V P +NIL+D + GM+ +A+ VF+ M P++ +Y ++ Y + S
Sbjct: 178 MVERNVMPDTVTFNILVDGLSKEGMILEAQCVFETMIEKGVEPNVNTYNALMDGYCSQSQ 237
Query: 357 MEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTT 416
M+ A+K F + + G P+V +Y LIKG+ K +++ + +M + P+ ++T
Sbjct: 238 MDEAQKLFNIMVRKGCAPSVRSYNILIKGHCKSGRIDEAKGLLAEMSHKALTPDTVTYST 297
Query: 417 IMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPN 476
+M + ++ A +EM S G PD +I+L +EA ELL
Sbjct: 298 LMKGFCQDGRPQDAQKLLEEMRSYGLLPDLMTYSIVLDGLCKQGHLDEAFELLKAMQESK 357
Query: 477 NEPGI 481
EP I
Sbjct: 358 IEPNI 362
>gi|168022838|ref|XP_001763946.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162684951|gb|EDQ71350.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 727
Score = 154 bits (390), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 102/366 (27%), Positives = 189/366 (51%), Gaps = 8/366 (2%)
Query: 59 PKDLVLGTLVRL-KQLKKWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEK 117
P + G L+ L +L K E + ++ Q N + ML+ Y + GDF A
Sbjct: 299 PTAVTYGCLINLYTKLGKMMKALEFCKEMKAQGI-TLNRNTYSMLVDGYVQLGDFANAFS 357
Query: 118 VLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFV 177
V M++ G P V++ L++A+ + + A + RM++ G P+ TY I+ F+
Sbjct: 358 VFEDMSEAGIEPDWVTYNILLKAFCKSRQMTRAIQLLGRMKTRGCSPTIQTYITIIDGFM 417
Query: 178 EANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQ 237
+ + A + T+ + + + +P+ ++++++ + G ++A + M GVQ
Sbjct: 418 KTGDVRMA---YKTVSEMKLAGCRPNATTYNVIMHNLVQLGQIDRAASVIDEMELAGVQP 474
Query: 238 STVTYNSLMSFETNYKEVSKIYDQMQRAG---LQPDVVSYALLINAYGKARREEEALAVF 294
+ +Y +LM + E+ + ++R +P ++SYA L+ A KA R + A+AV
Sbjct: 475 NFRSYTTLMQGFASIGEIGLAFKCLKRVNEITQKPPIISYASLLKACCKAGRMQNAIAVT 534
Query: 295 EEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNA 354
EEM AGV + +N LLD +A G + +A + + MR++ +PDI SYT+ ++A A
Sbjct: 535 EEMAFAGVPMNNYIFNTLLDGWAQRGDMWEAYGIMQKMRQEGFTPDIHSYTSFVNACCKA 594
Query: 355 SDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIF 414
DM+ A + +KQ PN+ TY LI G+ V++ EK + YD+M+ G+ P++ ++
Sbjct: 595 GDMQKATETIEEMKQQDLQPNLQTYTILIHGWTSVSHPEKALICYDEMKAAGLIPDKPLY 654
Query: 415 TTIMDA 420
I+ +
Sbjct: 655 YCIVTS 660
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 93/403 (23%), Positives = 191/403 (47%), Gaps = 9/403 (2%)
Query: 92 WDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAE 151
W+ N + +I AY K G+ +AE +++ M ++G ++ + LM+ Y R
Sbjct: 224 WNHNVAIYSSIIHAYCKAGNMERAEALVADMEEQGLEATLGLYNILMDGYARCHIEAQCL 283
Query: 152 AIFRRMQS---SGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFH 208
+F ++++ +G P+A+TY ++ L+ + K +A E F + + L ++ +
Sbjct: 284 NVFHKLKARIDTGLSPTAVTYGCLINLYTKLGKMMKALE-FCKEMKAQGITL--NRNTYS 340
Query: 209 MMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSK---IYDQMQRA 265
M++ Y + G + A +F M+E G++ VTYN L+ +++++ + +M+
Sbjct: 341 MLVDGYVQLGDFANAFSVFEDMSEAGIEPDWVTYNILLKAFCKSRQMTRAIQLLGRMKTR 400
Query: 266 GLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQA 325
G P + +Y +I+ + K A EM AG RP YN+++ G +D+A
Sbjct: 401 GCSPTIQTYITIIDGFMKTGDVRMAYKTVSEMKLAGCRPNATTYNVIMHNLVQLGQIDRA 460
Query: 326 RTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKG 385
+V M P+ SYTT++ + + ++ A K +R+ + P +I+Y +L+K
Sbjct: 461 ASVIDEMELAGVQPNFRSYTTLMQGFASIGEIGLAFKCLKRVNEITQKPPIISYASLLKA 520
Query: 386 YAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPD 445
K ++ + + ++M G+ N IF T++D + + D A ++M GF PD
Sbjct: 521 CCKAGRMQNAIAVTEEMAFAGVPMNNYIFNTLLDGWAQRGDMWEAYGIMQKMRQEGFTPD 580
Query: 446 QKAKNILLSLAKTADERNEANELLGNFNHPNNEPGINGLSISV 488
+ ++ A + +A E + + +P + +I +
Sbjct: 581 IHSYTSFVNACCKAGDMQKATETIEEMKQQDLQPNLQTYTILI 623
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 106/392 (27%), Positives = 176/392 (44%), Gaps = 9/392 (2%)
Query: 96 EMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFR 155
E D+ +LI YGK+GD A M G SV ++ L+ AY + A +
Sbjct: 123 ERDYALLIHYYGKRGDKRGARVTFEKMRAAGIDSSVHAYNNLIRAYIMAQNLQGAVSCVE 182
Query: 156 RMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYK 215
M+ G P+A T+ I+ + + + AE+ F + E + ++ +I+ Y
Sbjct: 183 EMEIEGIFPNAATFSAIISGYGSSGNVEAAEKWFQRSVSEN---WNHNVAIYSSIIHAYC 239
Query: 216 KAGGYEKARKLFALMAERGVQQSTVTYNSLM-SFETNYKEVS--KIYDQMQR---AGLQP 269
KAG E+A L A M E+G++ + YN LM + + E ++ +++ GL P
Sbjct: 240 KAGNMERAEALVADMEEQGLEATLGLYNILMDGYARCHIEAQCLNVFHKLKARIDTGLSP 299
Query: 270 DVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVF 329
V+Y LIN Y K + +AL +EM G+ Y++L+D + G A +VF
Sbjct: 300 TAVTYGCLINLYTKLGKMMKALEFCKEMKAQGITLNRNTYSMLVDGYVQLGDFANAFSVF 359
Query: 330 KCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKV 389
+ M PD +Y +L A+ + M A + R+K G P + TY T+I G+ K
Sbjct: 360 EDMSEAGIEPDWVTYNILLKAFCKSRQMTRAIQLLGRMKTRGCSPTIQTYITIIDGFMKT 419
Query: 390 NNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAK 449
++ + +M++ G +PN T + IM + D A EME G P+ ++
Sbjct: 420 GDVRMAYKTVSEMKLAGCRPNATTYNVIMHNLVQLGQIDRAASVIDEMELAGVQPNFRSY 479
Query: 450 NILLSLAKTADERNEANELLGNFNHPNNEPGI 481
L+ + E A + L N +P I
Sbjct: 480 TTLMQGFASIGEIGLAFKCLKRVNEITQKPPI 511
Score = 101 bits (252), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 69/295 (23%), Positives = 125/295 (42%), Gaps = 6/295 (2%)
Query: 201 KPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMS---FETNYKEVSK 257
K ++ + ++I+ Y K G AR F M G+ S YN+L+ N +
Sbjct: 120 KAVERDYALLIHYYGKRGDKRGARVTFEKMRAAGIDSSVHAYNNLIRAYIMAQNLQGAVS 179
Query: 258 IYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFA 317
++M+ G+ P+ +++ +I+ YG + E A F+ + Y+ ++ A+
Sbjct: 180 CVEEMEIEGIFPNAATFSAIISGYGSSGNVEAAEKWFQRSVSENWNHNVAIYSSIIHAYC 239
Query: 318 ISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQ---DGFVP 374
+G +++A + M + Y ++ Y F +LK G P
Sbjct: 240 KAGNMERAEALVADMEEQGLEATLGLYNILMDGYARCHIEAQCLNVFHKLKARIDTGLSP 299
Query: 375 NVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWY 434
+TYG LI Y K+ + K +E +M+ GI N+ ++ ++D Y + DF +A +
Sbjct: 300 TAVTYGCLINLYTKLGKMMKALEFCKEMKAQGITLNRNTYSMLVDGYVQLGDFANAFSVF 359
Query: 435 KEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGINGLSISVD 489
++M G PD NILL + + A +LLG P I +D
Sbjct: 360 EDMSEAGIEPDWVTYNILLKAFCKSRQMTRAIQLLGRMKTRGCSPTIQTYITIID 414
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/258 (23%), Positives = 113/258 (43%), Gaps = 10/258 (3%)
Query: 99 FLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQ 158
++ +I + K GD A K +S M G P+ ++ +M + G+ A ++ M+
Sbjct: 409 YITIIDGFMKTGDVRMAYKTVSEMKLAGCRPNATTYNVIMHNLVQLGQIDRAASVIDEME 468
Query: 159 SSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAG 218
+G +P+ +Y +++ F + A F L + KP + ++ KAG
Sbjct: 469 LAGVQPNFRSYTTLMQGFASIGEIGLA---FKCLKRVNEITQKPPIISYASLLKACCKAG 525
Query: 219 GYEKARKLFALMAERGVQQSTVTYNSLM---SFETNYKEVSKIYDQMQRAGLQPDVVSYA 275
+ A + MA GV + +N+L+ + + E I +M++ G PD+ SY
Sbjct: 526 RMQNAIAVTEEMAFAGVPMNNYIFNTLLDGWAQRGDMWEAYGIMQKMRQEGFTPDIHSYT 585
Query: 276 LLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRD 335
+NA KA ++A EEM ++P + Y IL+ + ++A + M+
Sbjct: 586 SFVNACCKAGDMQKATETIEEMKQQDLQPNLQTYTILIHGWTSVSHPEKALICYDEMKAA 645
Query: 336 RCSPD----ICSYTTMLS 349
PD C T++LS
Sbjct: 646 GLIPDKPLYYCIVTSLLS 663
>gi|30840221|emb|CAD61285.1| fertility restorer [Raphanus sativus]
gi|32452380|emb|CAD80165.1| restorer of fertility pentatricopeptide repeat [Raphanus sativus]
gi|32527602|gb|AAP86198.1| pentatricopeptide repeat-containing protein [Raphanus sativus]
gi|90903522|gb|ABE02309.1| Rf [Raphanus sativus]
gi|90903524|gb|ABE02310.1| Rf [Raphanus sativus]
gi|157931524|gb|ABW04886.1| PPR [Raphanus sativus]
Length = 687
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 110/428 (25%), Positives = 198/428 (46%), Gaps = 26/428 (6%)
Query: 30 NWRRLMNQIEEVGSAV-AVLRSERTRGQPL-PKDLVLGTLVRLKQLKKWNVVS--EVLEW 85
+ LMN + G V AV +R L P + GT+V KK + VS +L
Sbjct: 186 TFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVD-GMCKKGDTVSALNLLRK 244
Query: 86 LRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGG 145
+ S N + + +I + K G + A+ + + M +KG P + ++ +++ + G
Sbjct: 245 MEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSG 304
Query: 146 RYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSP--LKPD 203
R+ +AE + + M P +TY ++ FV+ KF EAEE++ +E P + P+
Sbjct: 305 RWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELY-----DEMLPRGIIPN 359
Query: 204 QKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVS---KIYD 260
+ MI + K + A +F LMA +G + +T+N+L+ K + ++
Sbjct: 360 TITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLH 419
Query: 261 QMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISG 320
+M GL D +Y LI+ + AL + +EM+ +G+ P + LLD +G
Sbjct: 420 EMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNG 479
Query: 321 MVDQARTVFKCMRRDR-----------CSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQ 369
+ A +FK M++ + PD+ +Y ++S +N AE+ + +
Sbjct: 480 KLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPH 539
Query: 370 DGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDS 429
G VP+ ITY ++I G K + L++ +++D M PN FTT+++ Y K D
Sbjct: 540 RGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDD 599
Query: 430 AVVWYKEM 437
+ + EM
Sbjct: 600 GLELFCEM 607
Score = 151 bits (381), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 116/483 (24%), Positives = 214/483 (44%), Gaps = 55/483 (11%)
Query: 48 LRSERTRGQPLPKDL----VLGTLVRL----------KQLKKWNVVSEVLEW-LRIQSWW 92
L S+ R +PLP + ++G +VR+ +++++ + ++ + + I+ +
Sbjct: 66 LFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFNILIKCFC 125
Query: 93 DFNEMDFLMLITAYGKQGDFNKAEKVLSF----------------------MNKKGYAPS 130
+++ F + + +GK V++F M + P+
Sbjct: 126 SCSKLPFAL--STFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALDFFHQMFETTCRPN 183
Query: 131 VVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFM 190
VV+ T LM R GR A A+ RM G +P+ +TY I+ + A +
Sbjct: 184 VVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLR 243
Query: 191 TLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLM-SFE 249
+ EE S + P+ ++ +I K G + A+ LF M E+G+ TYNS++ F
Sbjct: 244 KM--EEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFC 301
Query: 250 TN--YKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHK 307
++ + + ++ +M + PDVV+Y LINA+ K + EA +++EML G+ P
Sbjct: 302 SSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTI 361
Query: 308 AYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRL 367
Y+ ++D F +D A +F M CSP++ ++ T++ Y A ++ + +
Sbjct: 362 TYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEM 421
Query: 368 KQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDF 427
+ G V + TY TLI G+ V +L +++ +M +G+ P+ T++D N
Sbjct: 422 TETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKL 481
Query: 428 DSAVVWYKEMESC-----------GFPPDQKAKNILLSLAKTADERNEANELLGNFNHPN 476
A+ +K M+ G PD + NIL+S + EA EL H
Sbjct: 482 KDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRG 541
Query: 477 NEP 479
P
Sbjct: 542 IVP 544
Score = 149 bits (375), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 105/394 (26%), Positives = 191/394 (48%), Gaps = 23/394 (5%)
Query: 77 NVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTA 136
N+ +E+ E + +N M I + G ++ AE++L M ++ +P VV++ A
Sbjct: 276 NLFTEMQEKGIFPDLFTYNSM-----IVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNA 330
Query: 137 LMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEE 196
L+ A+ + G++ AE ++ M G P+ +TY ++ F + N+ AE +F + +
Sbjct: 331 LINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKG 390
Query: 197 KSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVS 256
SP + F+ +I Y A + +L M E G+ T TYN+L+ +++
Sbjct: 391 CSP---NLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLN 447
Query: 257 KIYDQMQR---AGLQPDVVSYALLINAYGKARREEEALAVFEEM------LDA-----GV 302
D +Q +GL PD+V+ L++ + ++AL +F+ M LDA GV
Sbjct: 448 AALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGV 507
Query: 303 RPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEK 362
P + YNIL+ G +A +++ M PD +Y++M+ S ++ A +
Sbjct: 508 EPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQ 567
Query: 363 FFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYG 422
F + F PNV+T+ TLI GY K ++ +E++ +M GI N + T++ +
Sbjct: 568 MFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICGFR 627
Query: 423 KNKDFDSAVVWYKEMESCGFPPDQ-KAKNILLSL 455
K + + A+ ++EM S G PD +N+L L
Sbjct: 628 KVGNINGALDIFQEMISSGVYPDTITIRNMLTGL 661
Score = 135 bits (340), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 82/351 (23%), Positives = 173/351 (49%), Gaps = 17/351 (4%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
LI A+ K+G F +AE++ M +G P+ ++++++++ + + R AE +F M + G
Sbjct: 331 LINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKG 390
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
P+ +T+ ++ + A + + E+ L + ++ L D ++ +I+ + G
Sbjct: 391 CSPNLITFNTLIDGYCGAKRIDDGMEL---LHEMTETGLVADTTTYNTLIHGFYLVGDLN 447
Query: 222 KARKLFALMAERGVQQSTVTYNSLMSFETN---YKEVSKIYDQMQRA-----------GL 267
A L M G+ VT ++L+ + K+ +++ MQ++ G+
Sbjct: 448 AALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGV 507
Query: 268 QPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQART 327
+PDV +Y +LI+ + EA ++EEM G+ P Y+ ++D +D+A
Sbjct: 508 EPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQ 567
Query: 328 VFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYA 387
+F M SP++ ++TT+++ Y A ++ + F + + G V N ITY TLI G+
Sbjct: 568 MFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICGFR 627
Query: 388 KVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEME 438
KV N+ ++I+ +M +G+ P+ ++ ++ AV ++++
Sbjct: 628 KVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRAVAMLEKLQ 678
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 69/325 (21%), Positives = 141/325 (43%), Gaps = 17/325 (5%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + + +I + KQ + AE + M KG +P++++ L++ Y R + +
Sbjct: 359 NTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELL 418
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
M +G TY ++ F A ++ ++ S L PD ++
Sbjct: 419 HEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMI---SSGLCPDIVTCDTLLDGL 475
Query: 215 KKAGGYEKARKLFALMAER-----------GVQQSTVTYNSLMSFETN---YKEVSKIYD 260
G + A ++F +M + GV+ TYN L+S N + E ++Y+
Sbjct: 476 CDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYE 535
Query: 261 QMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISG 320
+M G+ PD ++Y+ +I+ K R +EA +F+ M P + L++ + +G
Sbjct: 536 EMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAG 595
Query: 321 MVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYG 380
VD +F M R + +Y T++ + ++ GA F+ + G P+ IT
Sbjct: 596 RVDDGLELFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISSGVYPDTITIR 655
Query: 381 TLIKGYAKVNNLEKMMEIYDKMRVN 405
++ G L++ + + +K++++
Sbjct: 656 NMLTGLWSKEELKRAVAMLEKLQMS 680
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/260 (25%), Positives = 117/260 (45%), Gaps = 4/260 (1%)
Query: 214 YKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKE---VSKIYDQMQRAGLQPD 270
+ + G E A LF+ M S V + LM + V +Y +M+R ++ D
Sbjct: 54 FHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCD 113
Query: 271 VVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFK 330
+ S+ +LI + + AL+ F ++ G+ P + LL + V +A F
Sbjct: 114 IYSFNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALDFFH 173
Query: 331 CMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVN 390
M C P++ ++TT+++ + A R+ +DG P ITYGT++ G K
Sbjct: 174 QMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKG 233
Query: 391 NLEKMMEIYDKM-RVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAK 449
+ + + KM V+ I PN I++ I+D+ K+ A + EM+ G PD
Sbjct: 234 DTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTY 293
Query: 450 NILLSLAKTADERNEANELL 469
N ++ ++ ++A +LL
Sbjct: 294 NSMIVGFCSSGRWSDAEQLL 313
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/171 (18%), Positives = 81/171 (47%), Gaps = 3/171 (1%)
Query: 101 MLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSS 160
+LI+ +G F +AE++ M +G P ++++++++ + R A +F M S
Sbjct: 516 ILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSK 575
Query: 161 GPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGY 220
P+ +T+ ++ + +A + + E+F + + + + + +I ++K G
Sbjct: 576 SFSPNVVTFTTLINGYCKAGRVDDGLELFCEM---GRRGIVANAITYITLICGFRKVGNI 632
Query: 221 EKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSKIYDQMQRAGLQPDV 271
A +F M GV T+T ++++ + +E+ + +++ + D+
Sbjct: 633 NGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRAVAMLEKLQMSMDL 683
>gi|359479250|ref|XP_002275790.2| PREDICTED: pentatricopeptide repeat-containing protein
At5g01110-like [Vitis vinifera]
Length = 746
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 98/388 (25%), Positives = 178/388 (45%), Gaps = 35/388 (9%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
LI AY +QG +A +++ M+ KG P V ++ A++ + G+Y A+ + M G
Sbjct: 295 LINAYCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIG 354
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVF------------------MTLL---------- 193
P TY I+L + +AE +F + LL
Sbjct: 355 MSPDTATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQAL 414
Query: 194 ----DEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSF- 248
D + + L PD ++ ++I + + G +A K+ M E+G VTYN++++
Sbjct: 415 KYFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCVLDVVTYNTILNGL 474
Query: 249 --ETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTH 306
E E +++ +M G+ PD ++ LIN Y K +A+ +FE M+ ++P
Sbjct: 475 CKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYSKDGNMNKAVTLFEMMIQRNLKPDV 534
Query: 307 KAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRR 366
YN L+D F +++ ++ M R P+ SY +++ Y N + A + +
Sbjct: 535 VTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGYCNMGCVSEAFRLWDE 594
Query: 367 LKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKD 426
+ + GF +IT T++KGY + N K E M + GI P+ + T+++ + K ++
Sbjct: 595 MVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNTLINGFIKEEN 654
Query: 427 FDSAVVWYKEMESCGFPPDQKAKNILLS 454
D A +ME+ G PD N++L+
Sbjct: 655 MDRAFALVNKMENSGLLPDVITYNVILN 682
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 114/439 (25%), Positives = 195/439 (44%), Gaps = 12/439 (2%)
Query: 37 QIEEVGSAVAVLRSERTRGQPLPKDLVLGTLVRLKQLK-KWNVVSEVLEWLRIQSWWDFN 95
++ E A VL+S+ + +LG LV++ + W + EV ++S N
Sbjct: 199 KLREGCEAFRVLKSKGLCVSINACNSLLGGLVKVGWVDLAWEIYQEV-----VRSGVQVN 253
Query: 96 EMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFR 155
++I A K + LS M +KG P VV++ L+ AY R G + A +
Sbjct: 254 VYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQGLLEEAFELMD 313
Query: 156 RMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYK 215
M G +P TY I+ + K+ A+ V +L K + PD +++++
Sbjct: 314 SMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEML---KIGMSPDTATYNILLVECC 370
Query: 216 KAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETN---YKEVSKIYDQMQRAGLQPDVV 272
+ A ++F M +GV V++++L+ + + K + M+ AGL PD V
Sbjct: 371 RNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNV 430
Query: 273 SYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCM 332
Y +LI + + EAL V +EML+ G YN +L+ M+ +A +F M
Sbjct: 431 IYTILIGGFCRNGVMSEALKVRDEMLEQGCVLDVVTYNTILNGLCKEKMLSEADELFTEM 490
Query: 333 RRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNL 392
PD ++TT+++ Y +M A F + Q P+V+TY TLI G+ K + +
Sbjct: 491 TERGVFPDFYTFTTLINGYSKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEM 550
Query: 393 EKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNIL 452
EK+ E+++ M I PN + +++ Y A + EM GF N +
Sbjct: 551 EKVNELWNDMISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTI 610
Query: 453 LSLAKTADERNEANELLGN 471
+ A +A+E L N
Sbjct: 611 VKGYCRAGNAVKADEFLSN 629
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 91/354 (25%), Positives = 167/354 (47%), Gaps = 6/354 (1%)
Query: 97 MDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRR 156
+ F LI K G ++A K M G AP V +T L+ + R G A +
Sbjct: 395 VSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDE 454
Query: 157 MQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKK 216
M G +TY IL + EA+E+F + + + PD F +I Y K
Sbjct: 455 MLEQGCVLDVVTYNTILNGLCKEKMLSEADELFTEMTER---GVFPDFYTFTTLINGYSK 511
Query: 217 AGGYEKARKLFALMAERGVQQSTVTYNSLM---SFETNYKEVSKIYDQMQRAGLQPDVVS 273
G KA LF +M +R ++ VTYN+L+ + ++V+++++ M + P+ +S
Sbjct: 512 DGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHIS 571
Query: 274 YALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMR 333
Y +LIN Y EA +++EM++ G T N ++ + +G +A M
Sbjct: 572 YGILINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNML 631
Query: 334 RDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLE 393
PD +Y T+++ ++ +M+ A +++ G +P+VITY ++ G+++ ++
Sbjct: 632 LKGIVPDGITYNTLINGFIKEENMDRAFALVNKMENSGLLPDVITYNVILNGFSRQGRMQ 691
Query: 394 KMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQK 447
+ I KM G+ P+++ +T++++ + + A + EM GF PD K
Sbjct: 692 EAELIMLKMIERGVNPDRSTYTSLINGHVTQNNLKEAFRVHDEMLQRGFVPDDK 745
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 101/421 (23%), Positives = 193/421 (45%), Gaps = 12/421 (2%)
Query: 52 RTRGQPLPKDLVLGTLVRLKQLKKWNVV-SEVLEWLRIQSWWDFNEMDFLMLITAYGKQG 110
R+R P + ++L +VR + + +V S VL + S N + F +L+ Y +
Sbjct: 144 RSRRLPDAQAVIL-RMVRKSGVSRVEIVESLVLTYGNCGS----NPLVFDLLVRTYVQAR 198
Query: 111 DFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQ 170
+ + + KG S+ + +L+ + G A I++ + SG + + T
Sbjct: 199 KLREGCEAFRVLKSKGLCVSINACNSLLGGLVKVGWVDLAWEIYQEVVRSGVQVNVYTLN 258
Query: 171 IILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALM 230
I++ + K + + L D E+ + PD ++ +I Y + G E+A +L M
Sbjct: 259 IMINALCKNQKIENTKSF---LSDMEEKGVFPDVVTYNTLINAYCRQGLLEEAFELMDSM 315
Query: 231 AERGVQQSTVTYNSL---MSFETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARRE 287
+ +G++ TYN++ + Y + D+M + G+ PD +Y +L+ +
Sbjct: 316 SGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNILLVECCRNDNM 375
Query: 288 EEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTM 347
+A +F+EM GV P +++ L+ + +G +DQA F+ M+ +PD YT +
Sbjct: 376 MDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTIL 435
Query: 348 LSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGI 407
+ + M A K + + G V +V+TY T++ G K L + E++ +M G+
Sbjct: 436 IGGFCRNGVMSEALKVRDEMLEQGCVLDVVTYNTILNGLCKEKMLSEADELFTEMTERGV 495
Query: 408 KPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANE 467
P+ FTT+++ Y K+ + + AV ++ M PD N L+ E + NE
Sbjct: 496 FPDFYTFTTLINGYSKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNE 555
Query: 468 L 468
L
Sbjct: 556 L 556
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 86/179 (48%), Gaps = 6/179 (3%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + + +LI Y G ++A ++ M +KG+ ++++ +++ Y R G A+
Sbjct: 568 NHISYGILINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEFL 627
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
M G P +TY ++ F++ A F + E S L PD +++++ +
Sbjct: 628 SNMLLKGIVPDGITYNTLINGFIKEENMDRA---FALVNKMENSGLLPDVITYNVILNGF 684
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSLMS---FETNYKEVSKIYDQMQRAGLQPD 270
+ G ++A + M ERGV TY SL++ + N KE +++D+M + G PD
Sbjct: 685 SRQGRMQEAELIMLKMIERGVNPDRSTYTSLINGHVTQNNLKEAFRVHDEMLQRGFVPD 743
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 48/221 (21%), Positives = 91/221 (41%), Gaps = 27/221 (12%)
Query: 273 SYALLINAYGKARREEEALAVFEEML-DAGVRPTHKAYNILLDAFAISGMVDQARTVFKC 331
S++ +I+ ++RR +A AV M+ +GV +++L
Sbjct: 134 SFSAMIHILVRSRRLPDAQAVILRMVRKSGVSRVEIVESLVLTY---------------- 177
Query: 332 MRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNN 391
C + + ++ YV A + + FR LK G ++ +L+ G KV
Sbjct: 178 ---GNCGSNPLVFDLLVRTYVQARKLREGCEAFRVLKSKGLCVSINACNSLLGGLVKVGW 234
Query: 392 LEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNI 451
++ EIY ++ +G++ N +++A KN+ ++ + +ME G PD N
Sbjct: 235 VDLAWEIYQEVVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNT 294
Query: 452 LLSLAKTADERNEANELLGNFNHPNNEPG-------INGLS 485
L++ EA EL+ + + +P INGL
Sbjct: 295 LINAYCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLC 335
>gi|357499681|ref|XP_003620129.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495144|gb|AES76347.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 543
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 104/413 (25%), Positives = 195/413 (47%), Gaps = 6/413 (1%)
Query: 59 PKDLVLGTLVRLKQLKKWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKV 118
P + TL++ LK + + + + +++ + LI K G+ A +
Sbjct: 125 PNTITFTTLIKGLCLKGQIHQALLFHDNVVAMGFQLDQVGYGTLIHGLCKVGETRAALDL 184
Query: 119 LSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVE 178
L ++ P+VV ++ +++ + +A ++ M S G P+ +TY ++ F
Sbjct: 185 LRRVDGNLVQPNVVMYSTIIDGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISGFFT 244
Query: 179 ANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQS 238
+ K+A ++F ++ E +KPD F++++ + K G ++ + +FA+M ++G++ +
Sbjct: 245 VGQLKDAIDLFNKMILEN---IKPDVYTFNILVDGFCKDGKMKEGKTVFAMMMKQGIKPN 301
Query: 239 TVTYNSLMSFETNYKEVSK---IYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFE 295
VTY SLM KEV+K I M + G+ PD+ SY +LI+ + K ++ +EA+ +F+
Sbjct: 302 VVTYCSLMDGYCLVKEVNKAKSILYTMSQRGVNPDIQSYNILIDGFCKIKKVDEAMNLFK 361
Query: 296 EMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNAS 355
EM + P YN L+D G + A + M PDI +Y+++L A
Sbjct: 362 EMHHKHIIPDVVTYNSLIDGLCKLGKISYALKLVDEMHDRGVPPDIITYSSILDALCKNH 421
Query: 356 DMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFT 415
++ A +LK G PN+ TY LI G K LE I++ + V G +T
Sbjct: 422 QVDKAIALLTKLKDQGIRPNMYTYTILIDGLCKGGRLEDAHNIFEDLLVKGYNITVNTYT 481
Query: 416 TIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANEL 468
++ + FD A+ +M+ PD I++ DE ++A +L
Sbjct: 482 VMIHGFCNKGLFDEALALLSKMKDNSCIPDAVTYEIIIRSLFDKDENDKAEKL 534
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 91/414 (21%), Positives = 189/414 (45%), Gaps = 35/414 (8%)
Query: 48 LRSERTRGQPLPKDL----VLGTLVRLKQLKKWNVVSEVLEWLRIQS-WWDFNEMDFLML 102
L S R P P + +LG+LV+ K +S+ +E+ I + F LM
Sbjct: 63 LFSRLLRQNPTPPAIEFNKILGSLVKSKHYHTVLSLSQQMEFEGINPVLFHFQHPHQLM- 121
Query: 103 ITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGP 162
GY P+ ++ T L++ G+ A + + G
Sbjct: 122 -----------------------GYHPNTITFTTLIKGLCLKGQIHQALLFHDNVVAMGF 158
Query: 163 RPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEK 222
+ + Y ++ + + + A ++ L + + ++P+ M+ +I K
Sbjct: 159 QLDQVGYGTLIHGLCKVGETRAALDL---LRRVDGNLVQPNVVMYSTIIDGMCKDKHVND 215
Query: 223 ARKLFALMAERGVQQSTVTYNSLMS-FET--NYKEVSKIYDQMQRAGLQPDVVSYALLIN 279
A L++ M +G+ + VTY++L+S F T K+ ++++M ++PDV ++ +L++
Sbjct: 216 AFDLYSEMVSKGISPNVVTYSALISGFFTVGQLKDAIDLFNKMILENIKPDVYTFNILVD 275
Query: 280 AYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSP 339
+ K + +E VF M+ G++P Y L+D + + V++A+++ M + +P
Sbjct: 276 GFCKDGKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKEVNKAKSILYTMSQRGVNP 335
Query: 340 DICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIY 399
DI SY ++ + ++ A F+ + +P+V+TY +LI G K+ + +++
Sbjct: 336 DIQSYNILIDGFCKIKKVDEAMNLFKEMHHKHIIPDVVTYNSLIDGLCKLGKISYALKLV 395
Query: 400 DKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILL 453
D+M G+ P+ +++I+DA KN D A+ +++ G P+ IL+
Sbjct: 396 DEMHDRGVPPDIITYSSILDALCKNHQVDKAIALLTKLKDQGIRPNMYTYTILI 449
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 83/408 (20%), Positives = 174/408 (42%), Gaps = 28/408 (6%)
Query: 104 TAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRM------ 157
T + D A + S + ++ P + ++ + + Y ++ ++M
Sbjct: 49 TTFHNNNDVVDAFSLFSRLLRQNPTPPAIEFNKILGSLVKSKHYHTVLSLSQQMEFEGIN 108
Query: 158 ----------QSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSP---LKPDQ 204
Q G P+ +T+ ++K + +A LL + + DQ
Sbjct: 109 PVLFHFQHPHQLMGYHPNTITFTTLIKGLCLKGQIHQA------LLFHDNVVAMGFQLDQ 162
Query: 205 KMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSK---IYDQ 261
+ +I+ K G A L + VQ + V Y++++ K V+ +Y +
Sbjct: 163 VGYGTLIHGLCKVGETRAALDLLRRVDGNLVQPNVVMYSTIIDGMCKDKHVNDAFDLYSE 222
Query: 262 MQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGM 321
M G+ P+VV+Y+ LI+ + + ++A+ +F +M+ ++P +NIL+D F G
Sbjct: 223 MVSKGISPNVVTYSALISGFFTVGQLKDAIDLFNKMILENIKPDVYTFNILVDGFCKDGK 282
Query: 322 VDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGT 381
+ + +TVF M + P++ +Y +++ Y ++ A+ + Q G P++ +Y
Sbjct: 283 MKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKEVNKAKSILYTMSQRGVNPDIQSYNI 342
Query: 382 LIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCG 441
LI G+ K+ +++ M ++ +M I P+ + +++D K A+ EM G
Sbjct: 343 LIDGFCKIKKVDEAMNLFKEMHHKHIIPDVVTYNSLIDGLCKLGKISYALKLVDEMHDRG 402
Query: 442 FPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGINGLSISVD 489
PPD + +L + ++A LL P + +I +D
Sbjct: 403 VPPDIITYSSILDALCKNHQVDKAIALLTKLKDQGIRPNMYTYTILID 450
>gi|147840312|emb|CAN63985.1| hypothetical protein VITISV_001389 [Vitis vinifera]
Length = 850
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 98/388 (25%), Positives = 178/388 (45%), Gaps = 35/388 (9%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
LI AY +QG +A +++ M+ KG P V ++ A++ + G+Y A+ + M G
Sbjct: 399 LINAYCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIG 458
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVF------------------MTLL---------- 193
P TY I+L + +AE +F + LL
Sbjct: 459 MSPDTATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQAL 518
Query: 194 ----DEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSF- 248
D + + L PD ++ ++I + + G +A K+ M E+G VTYN++++
Sbjct: 519 KYFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCXLDVVTYNTILNGL 578
Query: 249 --ETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTH 306
E E +++ +M G+ PD ++ LIN Y K +A+ +FE M+ ++P
Sbjct: 579 CKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYXKDGNMNKAVTLFEMMIQRNLKPDV 638
Query: 307 KAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRR 366
YN L+D F +++ ++ M R P+ SY +++ Y N + A + +
Sbjct: 639 VTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGYCNMGCVSEAFRLWDE 698
Query: 367 LKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKD 426
+ + GF +IT T++KGY + N K E M + GI P+ + T+++ + K ++
Sbjct: 699 MVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNTLINGFIKEEN 758
Query: 427 FDSAVVWYKEMESCGFPPDQKAKNILLS 454
D A +ME+ G PD N++L+
Sbjct: 759 MDRAFALVNKMENSGLLPDVITYNVILN 786
Score = 151 bits (382), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 114/439 (25%), Positives = 195/439 (44%), Gaps = 12/439 (2%)
Query: 37 QIEEVGSAVAVLRSERTRGQPLPKDLVLGTLVRLKQLK-KWNVVSEVLEWLRIQSWWDFN 95
++ E A VL+S+ + +LG LV++ + W + EV ++S N
Sbjct: 303 KLREGCEAFRVLKSKGLCVSINACNSLLGGLVKVGWVDLAWEIYQEV-----VRSGVQVN 357
Query: 96 EMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFR 155
++I A K + LS M +KG P VV++ L+ AY R G + A +
Sbjct: 358 VYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQGLLEEAFELMD 417
Query: 156 RMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYK 215
M G +P TY I+ + K+ A+ V +L K + PD +++++
Sbjct: 418 SMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEML---KIGMSPDTATYNILLVECC 474
Query: 216 KAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETN---YKEVSKIYDQMQRAGLQPDVV 272
+ A ++F M +GV V++++L+ + + K + M+ AGL PD V
Sbjct: 475 RNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNV 534
Query: 273 SYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCM 332
Y +LI + + EAL V +EML+ G YN +L+ M+ +A +F M
Sbjct: 535 IYTILIGGFCRNGVMSEALKVRDEMLEQGCXLDVVTYNTILNGLCKEKMLSEADELFTEM 594
Query: 333 RRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNL 392
PD ++TT+++ Y +M A F + Q P+V+TY TLI G+ K + +
Sbjct: 595 TERGVFPDFYTFTTLINGYXKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEM 654
Query: 393 EKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNIL 452
EK+ E+++ M I PN + +++ Y A + EM GF N +
Sbjct: 655 EKVNELWNDMISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTI 714
Query: 453 LSLAKTADERNEANELLGN 471
+ A +A+E L N
Sbjct: 715 VKGYCRAGNAVKADEFLSN 733
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 91/354 (25%), Positives = 167/354 (47%), Gaps = 6/354 (1%)
Query: 97 MDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRR 156
+ F LI K G ++A K M G AP V +T L+ + R G A +
Sbjct: 499 VSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDE 558
Query: 157 MQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKK 216
M G +TY IL + EA+E+F + + + PD F +I Y K
Sbjct: 559 MLEQGCXLDVVTYNTILNGLCKEKMLSEADELFTEMTER---GVFPDFYTFTTLINGYXK 615
Query: 217 AGGYEKARKLFALMAERGVQQSTVTYNSLM---SFETNYKEVSKIYDQMQRAGLQPDVVS 273
G KA LF +M +R ++ VTYN+L+ + ++V+++++ M + P+ +S
Sbjct: 616 DGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHIS 675
Query: 274 YALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMR 333
Y +LIN Y EA +++EM++ G T N ++ + +G +A M
Sbjct: 676 YGILINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNML 735
Query: 334 RDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLE 393
PD +Y T+++ ++ +M+ A +++ G +P+VITY ++ G+++ ++
Sbjct: 736 LKGIVPDGITYNTLINGFIKEENMDRAFALVNKMENSGLLPDVITYNVILNGFSRQGRMQ 795
Query: 394 KMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQK 447
+ I KM G+ P+++ +T++++ + + A + EM GF PD K
Sbjct: 796 EAELIMLKMIERGVNPDRSTYTSLINGHVTQNNLKEAFRVHDEMLQRGFVPDDK 849
Score = 128 bits (322), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 100/421 (23%), Positives = 192/421 (45%), Gaps = 12/421 (2%)
Query: 52 RTRGQPLPKDLVLGTLVRLKQLKKWNVV-SEVLEWLRIQSWWDFNEMDFLMLITAYGKQG 110
R+R P + ++L +VR + + +V S VL + S N + F +L+ Y +
Sbjct: 248 RSRRLPDAQAVIL-RMVRKSGVSRVEIVESLVLTYGNCGS----NPLVFDLLVRTYVQAR 302
Query: 111 DFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQ 170
+ + + KG S+ + +L+ + G A I++ + SG + + T
Sbjct: 303 KLREGCEAFRVLKSKGLCVSINACNSLLGGLVKVGWVDLAWEIYQEVVRSGVQVNVYTLN 362
Query: 171 IILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALM 230
I++ + K + + L D E+ + PD ++ +I Y + G E+A +L M
Sbjct: 363 IMINALCKNQKIENTKSF---LSDMEEKGVFPDVVTYNTLINAYCRQGLLEEAFELMDSM 419
Query: 231 AERGVQQSTVTYNSL---MSFETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARRE 287
+ +G++ TYN++ + Y + D+M + G+ PD +Y +L+ +
Sbjct: 420 SGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNILLVECCRNDNM 479
Query: 288 EEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTM 347
+A +F+EM GV P +++ L+ + +G +DQA F+ M+ +PD YT +
Sbjct: 480 MDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTIL 539
Query: 348 LSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGI 407
+ + M A K + + G +V+TY T++ G K L + E++ +M G+
Sbjct: 540 IGGFCRNGVMSEALKVRDEMLEQGCXLDVVTYNTILNGLCKEKMLSEADELFTEMTERGV 599
Query: 408 KPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANE 467
P+ FTT+++ Y K+ + + AV ++ M PD N L+ E + NE
Sbjct: 600 FPDFYTFTTLINGYXKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNE 659
Query: 468 L 468
L
Sbjct: 660 L 660
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 86/179 (48%), Gaps = 6/179 (3%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + + +LI Y G ++A ++ M +KG+ ++++ +++ Y R G A+
Sbjct: 672 NHISYGILINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEFL 731
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
M G P +TY ++ F++ A F + E S L PD +++++ +
Sbjct: 732 SNMLLKGIVPDGITYNTLINGFIKEENMDRA---FALVNKMENSGLLPDVITYNVILNGF 788
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSLMS---FETNYKEVSKIYDQMQRAGLQPD 270
+ G ++A + M ERGV TY SL++ + N KE +++D+M + G PD
Sbjct: 789 SRQGRMQEAELIMLKMIERGVNPDRSTYTSLINGHVTQNNLKEAFRVHDEMLQRGFVPD 847
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 48/221 (21%), Positives = 91/221 (41%), Gaps = 27/221 (12%)
Query: 273 SYALLINAYGKARREEEALAVFEEML-DAGVRPTHKAYNILLDAFAISGMVDQARTVFKC 331
S++ +I+ ++RR +A AV M+ +GV +++L
Sbjct: 238 SFSAMIHILVRSRRLPDAQAVILRMVRKSGVSRVEIVESLVLTY---------------- 281
Query: 332 MRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNN 391
C + + ++ YV A + + FR LK G ++ +L+ G KV
Sbjct: 282 ---GNCGSNPLVFDLLVRTYVQARKLREGCEAFRVLKSKGLCVSINACNSLLGGLVKVGW 338
Query: 392 LEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNI 451
++ EIY ++ +G++ N +++A KN+ ++ + +ME G PD N
Sbjct: 339 VDLAWEIYQEVVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNT 398
Query: 452 LLSLAKTADERNEANELLGNFNHPNNEPG-------INGLS 485
L++ EA EL+ + + +P INGL
Sbjct: 399 LINAYCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLC 439
>gi|297737176|emb|CBI26377.3| unnamed protein product [Vitis vinifera]
Length = 572
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 102/382 (26%), Positives = 180/382 (47%), Gaps = 6/382 (1%)
Query: 101 MLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSS 160
M+I + K G +A + S M G P VV +++LM+ R GR K A F+ M+
Sbjct: 151 MIIDSLCKDGMTTEALDMFSEMIGAGILPDVVVYSSLMDGLCRFGRLKEALEFFKEMEGR 210
Query: 161 GPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGY 220
G TY ++ A +KE ++D SP D F ++I K G
Sbjct: 211 GISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGFSP---DAFTFTILIDGLCKEGKV 267
Query: 221 EKARKLFALMAERGVQQSTVTYNSLM---SFETNYKEVSKIYDQMQRAGLQPDVVSYALL 277
+A+++ LM +G + +TYN+LM ++ +K+++ + G++ +V SY +L
Sbjct: 268 GEAQQILELMHHKGKEPDILTYNTLMNGLCLVGQLEDATKLFESLADRGIKLNVFSYNIL 327
Query: 278 INAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRC 337
IN Y K ++ +EA +FEEM G++P+ YN L+ A SG V A+ +F M+
Sbjct: 328 INGYCKDQKIDEAFRLFEEMRPKGLKPSTVTYNTLIGALCQSGRVRTAQKLFVEMQTCGQ 387
Query: 338 SPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMME 397
+ +Y +L +E A F+ +K+ PN+ + L+ G + LE+ +
Sbjct: 388 FLKLSTYCVLLDGLCKNGHLEEAIDLFQSIKKTEHKPNIEVFSILLDGMCRAGKLEEAWK 447
Query: 398 IYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAK 457
+D++ NG++P+ + +++ AV +ME G PD N+++
Sbjct: 448 QFDEISKNGLEPDTIAYNILINGLCNKGMLSEAVKLLWQMEEKGCLPDSITFNVIIQNLL 507
Query: 458 TADERNEANELLGNFNHPNNEP 479
+E +EA +LL + N P
Sbjct: 508 KENEIHEAIQLLEEMRNRNFSP 529
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 89/351 (25%), Positives = 166/351 (47%), Gaps = 9/351 (2%)
Query: 112 FNKAEKVLSF---MNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALT 168
F + ++ L F M +G + V ++ +L+ R G +K M G P A T
Sbjct: 194 FGRLKEALEFFKEMEGRGISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGFSPDAFT 253
Query: 169 YQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFA 228
+ I++ + K EA+++ + + K +PD ++ ++ G E A KLF
Sbjct: 254 FTILIDGLCKEGKVGEAQQILELMHHKGK---EPDILTYNTLMNGLCLVGQLEDATKLFE 310
Query: 229 LMAERGVQQSTVTYNSLMSF---ETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKAR 285
+A+RG++ + +YN L++ + E +++++M+ GL+P V+Y LI A ++
Sbjct: 311 SLADRGIKLNVFSYNILINGYCKDQKIDEAFRLFEEMRPKGLKPSTVTYNTLIGALCQSG 370
Query: 286 REEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYT 345
R A +F EM G Y +LLD +G +++A +F+ +++ P+I ++
Sbjct: 371 RVRTAQKLFVEMQTCGQFLKLSTYCVLLDGLCKNGHLEEAIDLFQSIKKTEHKPNIEVFS 430
Query: 346 TMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVN 405
+L A +E A K F + ++G P+ I Y LI G L + +++ +M
Sbjct: 431 ILLDGMCRAGKLEEAWKQFDEISKNGLEPDTIAYNILINGLCNKGMLSEAVKLLWQMEEK 490
Query: 406 GIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLA 456
G P+ F I+ K + A+ +EM + F PD+ ++LL LA
Sbjct: 491 GCLPDSITFNVIIQNLLKENEIHEAIQLLEEMRNRNFSPDEAVTSMLLCLA 541
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 97/369 (26%), Positives = 164/369 (44%), Gaps = 7/369 (1%)
Query: 124 KKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFK 183
K+G+ P V+ T L++ +A +F M G A TY I++ +A K
Sbjct: 70 KRGFEPDAVTVTTLVKGVWMENGIPDAVQLFDEMTEKGLFGDAKTYGILINGLCKARKTG 129
Query: 184 EAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYN 243
A + L ++ K K D + M+I K G +A +F+ M G+ V Y+
Sbjct: 130 LA----IKLHEKMKGNCKGDVFTYGMIIDSLCKDGMTTEALDMFSEMIGAGILPDVVVYS 185
Query: 244 SLMSFETNY---KEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDA 300
SLM + KE + + +M+ G+ DV +Y LI+ +A +E M+D
Sbjct: 186 SLMDGLCRFGRLKEALEFFKEMEGRGISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDR 245
Query: 301 GVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGA 360
G P + IL+D G V +A+ + + M PDI +Y T+++ +E A
Sbjct: 246 GFSPDAFTFTILIDGLCKEGKVGEAQQILELMHHKGKEPDILTYNTLMNGLCLVGQLEDA 305
Query: 361 EKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDA 420
K F L G NV +Y LI GY K +++ ++++MR G+KP+ + T++ A
Sbjct: 306 TKLFESLADRGIKLNVFSYNILINGYCKDQKIDEAFRLFEEMRPKGLKPSTVTYNTLIGA 365
Query: 421 YGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPG 480
++ +A + EM++CG +LL EA +L + ++P
Sbjct: 366 LCQSGRVRTAQKLFVEMQTCGQFLKLSTYCVLLDGLCKNGHLEEAIDLFQSIKKTEHKPN 425
Query: 481 INGLSISVD 489
I SI +D
Sbjct: 426 IEVFSILLD 434
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 76/334 (22%), Positives = 165/334 (49%), Gaps = 6/334 (1%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
LI + G + + L+ M +G++P + T L++ + G+ A+ I M G
Sbjct: 222 LIHGLSRAGLWKEVTWFLNLMVDRGFSPDAFTFTILIDGLCKEGKVGEAQQILELMHHKG 281
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
P LTY ++ + ++A ++F +L D +K + ++++I Y K +
Sbjct: 282 KEPDILTYNTLMNGLCLVGQLEDATKLFESLADR---GIKLNVFSYNILINGYCKDQKID 338
Query: 222 KARKLFALMAERGVQQSTVTYNSLMSFETNYKEV---SKIYDQMQRAGLQPDVVSYALLI 278
+A +LF M +G++ STVTYN+L+ V K++ +MQ G + +Y +L+
Sbjct: 339 EAFRLFEEMRPKGLKPSTVTYNTLIGALCQSGRVRTAQKLFVEMQTCGQFLKLSTYCVLL 398
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCS 338
+ K EEA+ +F+ + +P + ++ILLD +G +++A F + ++
Sbjct: 399 DGLCKNGHLEEAIDLFQSIKKTEHKPNIEVFSILLDGMCRAGKLEEAWKQFDEISKNGLE 458
Query: 339 PDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEI 398
PD +Y +++ N + A K ++++ G +P+ IT+ +I+ K N + + +++
Sbjct: 459 PDTIAYNILINGLCNKGMLSEAVKLLWQMEEKGCLPDSITFNVIIQNLLKENEIHEAIQL 518
Query: 399 YDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVV 432
++MR P++ + + ++ + + +A+V
Sbjct: 519 LEEMRNRNFSPDEAVTSMLLCLASFDPQWHAALV 552
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 112/223 (50%), Gaps = 6/223 (2%)
Query: 94 FNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAI 153
N + +LI Y K ++A ++ M KG PS V++ L+ A + GR + A+ +
Sbjct: 319 LNVFSYNILINGYCKDQKIDEAFRLFEEMRPKGLKPSTVTYNTLIGALCQSGRVRTAQKL 378
Query: 154 FRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYM 213
F MQ+ G TY ++L + +EA ++F ++ +K+ KP+ ++F +++
Sbjct: 379 FVEMQTCGQFLKLSTYCVLLDGLCKNGHLEEAIDLFQSI---KKTEHKPNIEVFSILLDG 435
Query: 214 YKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETN---YKEVSKIYDQMQRAGLQPD 270
+AG E+A K F +++ G++ T+ YN L++ N E K+ QM+ G PD
Sbjct: 436 MCRAGKLEEAWKQFDEISKNGLEPDTIAYNILINGLCNKGMLSEAVKLLWQMEEKGCLPD 495
Query: 271 VVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILL 313
+++ ++I K EA+ + EEM + P ++LL
Sbjct: 496 SITFNVIIQNLLKENEIHEAIQLLEEMRNRNFSPDEAVTSMLL 538
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/236 (21%), Positives = 99/236 (41%), Gaps = 8/236 (3%)
Query: 264 RAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVD 323
+ G +PD V+ L+ +A+ +F+EM + G+ K Y IL++ +
Sbjct: 70 KRGFEPDAVTVTTLVKGVWMENGIPDAVQLFDEMTEKGLFGDAKTYGILINGLCKARKTG 129
Query: 324 QARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLI 383
A + + M+ + C D+ +Y ++ + A F + G +P+V+ Y +L+
Sbjct: 130 LAIKLHEKMKGN-CKGDVFTYGMIIDSLCKDGMTTEALDMFSEMIGAGILPDVVVYSSLM 188
Query: 384 KGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFP 443
G + L++ +E + +M GI + + +++ + + + M GF
Sbjct: 189 DGLCRFGRLKEALEFFKEMEGRGISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGFS 248
Query: 444 PDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGI-------NGLSISVDEED 492
PD IL+ + EA ++L +H EP I NGL + ED
Sbjct: 249 PDAFTFTILIDGLCKEGKVGEAQQILELMHHKGKEPDILTYNTLMNGLCLVGQLED 304
>gi|449459510|ref|XP_004147489.1| PREDICTED: pentatricopeptide repeat-containing protein At5g39980,
chloroplastic-like [Cucumis sativus]
gi|449530101|ref|XP_004172035.1| PREDICTED: pentatricopeptide repeat-containing protein At5g39980,
chloroplastic-like [Cucumis sativus]
Length = 680
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 113/492 (22%), Positives = 217/492 (44%), Gaps = 30/492 (6%)
Query: 10 MQKRRKVEVFKDAADEAGKKNWRRLMNQIEEVGSAVAVLRSERTRGQPLPK--------- 60
++ R ++ +F ++ K WRR Q S +L + R P+
Sbjct: 38 IKPRTRIPIFTASSSSTSKDIWRR---QTPSEKSTTTLLPQKYQRSGRRPRESSHLDHSI 94
Query: 61 --DLVLGTLVRLKQLKKWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKV 118
D +L ++ + K + E + S + E+ +++ ++ D+ ++ +
Sbjct: 95 DMDELLASIGQTKNEQ---------ELYSVLSPYKGRELSMRFMVSLLSRESDWQRSLAI 145
Query: 119 LSFMNKKG-YAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFV 177
L ++N++ Y PSV ++ ++ R +++ A +F M+ TY ++ F
Sbjct: 146 LDWINEEALYTPSVYAYNVVLRNVLRAKQWELAHGLFDEMRQRALAADRYTYSTLITYFG 205
Query: 178 EANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQ 237
+ F A L E+ + D ++ +I + +K Y KA +F+ + G+
Sbjct: 206 KEGMFDAA---LSWLQKMEQDRVSGDLVLYSNLIELSRKLCDYSKAISIFSRLKRSGITP 262
Query: 238 STVTYNSLMSF---ETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVF 294
V YN++++ ++E + +M+ + PD VSY+ L+N + + + EAL+V
Sbjct: 263 DIVAYNTMINVFGKAKLFREARFLLKEMRAVDVMPDTVSYSTLLNMFVENEKFLEALSVI 322
Query: 295 EEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNA 354
EM + NI++D + MV +A +F MR+ P++ SY T+L Y A
Sbjct: 323 SEMKEVNCPLDLTTCNIMIDVYGQLDMVKEADRLFWRMRKIGIEPNVVSYNTILRVYGEA 382
Query: 355 SDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIF 414
A FR +++ NV+TY T+IK Y K EK + M+ GI+PN +
Sbjct: 383 ELFGEAIHLFRLMQRKEIKQNVVTYNTMIKIYGKTLEHEKATNLVQDMQKRGIEPNAITY 442
Query: 415 TTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNH 474
+TI+ +GK D + + ++++ S G DQ ++ + A A LL
Sbjct: 443 STIISIWGKAGKLDRSAMLFQKLRSSGAEIDQVLYQTMIVAYEKAGLVGHAKRLLHELKQ 502
Query: 475 PNNEPGINGLSI 486
P+N P ++I
Sbjct: 503 PDNIPRTTAITI 514
Score = 151 bits (382), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 104/417 (24%), Positives = 199/417 (47%), Gaps = 44/417 (10%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
LI K D++KA + S + + G P +V++ ++ +G+ ++ A + + M++
Sbjct: 235 LIELSRKLCDYSKAISIFSRLKRSGITPDIVAYNTMINVFGKAKLFREARFLLKEMRAVD 294
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
P ++Y +L +FVE KF EA V ++ + E PL D ++MI +Y + +
Sbjct: 295 VMPDTVSYSTLLNMFVENEKFLEALSV-ISEMKEVNCPL--DLTTCNIMIDVYGQLDMVK 351
Query: 222 KARKLFALMAERGVQQSTVTYNSLMSFETN---YKEVSKIYDQMQRAGLQPDVVSYALLI 278
+A +LF M + G++ + V+YN+++ + E ++ MQR ++ +VV+Y +I
Sbjct: 352 EADRLFWRMRKIGIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKEIKQNVVTYNTMI 411
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCS 338
YGK E+A + ++M G+ P Y+ ++ + +G +D++ +F+ +R
Sbjct: 412 KIYGKTLEHEKATNLVQDMQKRGIEPNAITYSTIISIWGKAGKLDRSAMLFQKLRSSGAE 471
Query: 339 PDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVP------------------------ 374
D Y TM+ AY A + A++ LKQ +P
Sbjct: 472 IDQVLYQTMIVAYEKAGLVGHAKRLLHELKQPDNIPRTTAITILAKAGRIEEATWVFRQA 531
Query: 375 -------NVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDF 427
++ + +I +++ + ++E+++KMR G PN + +++AYGK +DF
Sbjct: 532 FDAGELKDISVFECMIDLFSRNKKHKNVLEVFEKMRNVGHFPNSDVIALVLNAYGKLRDF 591
Query: 428 DSAVVWYKEM--ESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGIN 482
D+A Y EM E C F + + +LSL RN+ L F +++P IN
Sbjct: 592 DTADALYMEMQEEGCVFTDEVHFQ--MLSLYGA---RNDYKRLESLFERLDSDPNIN 643
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/191 (22%), Positives = 94/191 (49%)
Query: 299 DAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDME 358
+A P+ AYN++L + + A +F MR+ + D +Y+T+++ + +
Sbjct: 152 EALYTPSVYAYNVVLRNVLRAKQWELAHGLFDEMRQRALAADRYTYSTLITYFGKEGMFD 211
Query: 359 GAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIM 418
A + ++++QD +++ Y LI+ K+ + K + I+ +++ +GI P+ + T++
Sbjct: 212 AALSWLQKMEQDRVSGDLVLYSNLIELSRKLCDYSKAISIFSRLKRSGITPDIVAYNTMI 271
Query: 419 DAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNE 478
+ +GK K F A KEM + PD + + LL++ ++ EA ++ N
Sbjct: 272 NVFGKAKLFREARFLLKEMRAVDVMPDTVSYSTLLNMFVENEKFLEALSVISEMKEVNCP 331
Query: 479 PGINGLSISVD 489
+ +I +D
Sbjct: 332 LDLTTCNIMID 342
Score = 38.9 bits (89), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 54/117 (46%), Gaps = 3/117 (2%)
Query: 74 KKWNVVSEVLEWLRIQSWWDFNEMDFLMLI-TAYGKQGDFNKAEKVLSFMNKKGYAPSVV 132
KK V EV E +R + F D + L+ AYGK DF+ A+ + M ++G +
Sbjct: 554 KKHKNVLEVFEKMR--NVGHFPNSDVIALVLNAYGKLRDFDTADALYMEMQEEGCVFTDE 611
Query: 133 SHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVF 189
H ++ YG YK E++F R+ S + ++ ++ N+ K+A +
Sbjct: 612 VHFQMLSLYGARNDYKRLESLFERLDSDPNINKKELHLVVASIYERGNRSKDASRII 668
>gi|357122161|ref|XP_003562784.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g02860-like [Brachypodium distachyon]
Length = 791
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 99/366 (27%), Positives = 184/366 (50%), Gaps = 46/366 (12%)
Query: 129 PSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLF------------ 176
P ++TAL+ A R R+++A A+FRRM ++G P+ +TY ++L ++
Sbjct: 174 PDASAYTALISALSRASRFRDAVAVFRRMVANGVCPALVTYNVVLHVYSKIAVPWKEVLA 233
Query: 177 -VEANK-----------------------FKEAEEVFMTLLDEEKSP-LKPDQKMFHMMI 211
V++ + +KEA +VF DE ++ +PD+ + ++
Sbjct: 234 LVDSMRKDGIPLDRYTYNTLISCCRRRALYKEAAKVF----DEMRAAGFEPDKVTLNSLL 289
Query: 212 YMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETN---YKEVSKIYDQMQRAGLQ 268
+Y KA Y++A + M + G S VTYNSL+S +E +++ ++M+ G++
Sbjct: 290 DVYGKARRYDEAIGVLKEMEQGGCPPSVVTYNSLISSYVKDGLLEEATQLKEEMEVKGIE 349
Query: 269 PDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTV 328
PDV++Y L++ +A + + A+ + EML G +P YN L+ + G + V
Sbjct: 350 PDVITYTTLVSGLDRAGKIDAAIGTYNEMLRNGCKPNLCTYNALIKLHGVRGKFPEMMIV 409
Query: 329 FKCMRRDRCSPDICSYTTMLSAY-VNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYA 387
F +R PD+ ++ T+L+ + N D E F+ +K+ G+VP TY +LI Y+
Sbjct: 410 FDEIRSAGFVPDVVTWNTLLAVFGQNGLDTE-VSGVFKEMKKSGYVPERDTYVSLISSYS 468
Query: 388 KVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQK 447
+ ++ MEIY +M GI P+ + + ++ A + ++ A + EME+ PD+
Sbjct: 469 RCGLFDQAMEIYKRMIEAGIHPDISTYNAVLSALARGGRWEQAEKLFAEMENLDSRPDEL 528
Query: 448 AKNILL 453
+ + LL
Sbjct: 529 SYSSLL 534
Score = 144 bits (364), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 86/298 (28%), Positives = 162/298 (54%), Gaps = 9/298 (3%)
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKK-AGGY 220
P P A Y ++ A++F++A VF ++ + + P +++++++Y K A +
Sbjct: 172 PDPDASAYTALISALSRASRFRDAVAVFRRMV---ANGVCPALVTYNVVLHVYSKIAVPW 228
Query: 221 EKARKLFALMAERGVQQSTVTYNSLMSF---ETNYKEVSKIYDQMQRAGLQPDVVSYALL 277
++ L M + G+ TYN+L+S YKE +K++D+M+ AG +PD V+ L
Sbjct: 229 KEVLALVDSMRKDGIPLDRYTYNTLISCCRRRALYKEAAKVFDEMRAAGFEPDKVTLNSL 288
Query: 278 INAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRC 337
++ YGKARR +EA+ V +EM G P+ YN L+ ++ G++++A + + M
Sbjct: 289 LDVYGKARRYDEAIGVLKEMEQGGCPPSVVTYNSLISSYVKDGLLEEATQLKEEMEVKGI 348
Query: 338 SPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMME 397
PD+ +YTT++S A ++ A + + ++G PN+ TY LIK + +MM
Sbjct: 349 EPDVITYTTLVSGLDRAGKIDAAIGTYNEMLRNGCKPNLCTYNALIKLHGVRGKFPEMMI 408
Query: 398 IYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVW-YKEMESCGFPPDQKAKNILLS 454
++D++R G P+ + T++ +G+N D+ V +KEM+ G+ P++ L+S
Sbjct: 409 VFDEIRSAGFVPDVVTWNTLLAVFGQN-GLDTEVSGVFKEMKKSGYVPERDTYVSLIS 465
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 86/346 (24%), Positives = 168/346 (48%), Gaps = 7/346 (2%)
Query: 76 WNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHT 135
W V +++ +R + + + LI+ ++ + +A KV M G+ P V+
Sbjct: 228 WKEVLALVDSMR-KDGIPLDRYTYNTLISCCRRRALYKEAAKVFDEMRAAGFEPDKVTLN 286
Query: 136 ALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDE 195
+L++ YG+ RY A + + M+ G PS +TY ++ +V+ +EA ++ +
Sbjct: 287 SLLDVYGKARRYDEAIGVLKEMEQGGCPPSVVTYNSLISSYVKDGLLEEATQLKEEM--- 343
Query: 196 EKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFET---NY 252
E ++PD + ++ +AG + A + M G + + TYN+L+ +
Sbjct: 344 EVKGIEPDVITYTTLVSGLDRAGKIDAAIGTYNEMLRNGCKPNLCTYNALIKLHGVRGKF 403
Query: 253 KEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNIL 312
E+ ++D+++ AG PDVV++ L+ +G+ + E VF+EM +G P Y L
Sbjct: 404 PEMMIVFDEIRSAGFVPDVVTWNTLLAVFGQNGLDTEVSGVFKEMKKSGYVPERDTYVSL 463
Query: 313 LDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGF 372
+ +++ G+ DQA ++K M PDI +Y +LSA E AEK F ++
Sbjct: 464 ISSYSRCGLFDQAMEIYKRMIEAGIHPDISTYNAVLSALARGGRWEQAEKLFAEMENLDS 523
Query: 373 VPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIM 418
P+ ++Y +L+ YA L+KM + + + I+ + + T++
Sbjct: 524 RPDELSYSSLLHAYANAKKLDKMKSLSEDIYAERIESHNGLVKTLV 569
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 84/329 (25%), Positives = 160/329 (48%), Gaps = 18/329 (5%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
L+ +G+ G + V M K GY P ++ +L+ +Y R G + A I++RM +G
Sbjct: 428 LLAVFGQNGLDTEVSGVFKEMKKSGYVPERDTYVSLISSYSRCGLFDQAMEIYKRMIEAG 487
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
P TY +L ++++AE++F + E +PD+ + +++ Y A +
Sbjct: 488 IHPDISTYNAVLSALARGGRWEQAEKLFAEM---ENLDSRPDELSYSSLLHAYANAKKLD 544
Query: 222 KARKLFA-LMAER-----GVQQSTVTYNSLMSFETNYKEVSKIYDQMQRAGLQPDVVSYA 275
K + L + AER G+ ++ V NS ++ N + K + +++R D+
Sbjct: 545 KMKSLSEDIYAERIESHNGLVKTLVLVNSKVN---NLSDTEKAFLELRRRRCSLDINVLN 601
Query: 276 LLINAYGK---ARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCM 332
+I+ YGK ++ EE L++ +E + + + YN L+ ++ G ++ + +
Sbjct: 602 AMISIYGKNGMVKKVEEILSLMKE---SSINLSTATYNSLMHMYSRLGDCEKCENILTEI 658
Query: 333 RRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNL 392
+ R PD SY TM+ AY M+ A + F +K G VP+++TY +K Y +
Sbjct: 659 KSSRARPDRYSYNTMIYAYGRKGQMKEASRLFSEMKCSGLVPDIVTYNIFVKSYVANSMF 718
Query: 393 EKMMEIYDKMRVNGIKPNQTIFTTIMDAY 421
E+ +++ M +G KPN+ + TI+ Y
Sbjct: 719 EEAIDLVRYMVTHGCKPNERTYNTILQEY 747
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 97/391 (24%), Positives = 178/391 (45%), Gaps = 43/391 (10%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
LI++Y K G +A ++ M KG P V+++T L+ R G+ A + M +G
Sbjct: 323 LISSYVKDGLLEEATQLKEEMEVKGIEPDVITYTTLVSGLDRAGKIDAAIGTYNEMLRNG 382
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSP-LKPDQKMFHMMIYMYKKAGGY 220
+P+ TY ++KL KF E M + DE +S PD ++ ++ ++ + G
Sbjct: 383 CKPNLCTYNALIKLHGVRGKFPE----MMIVFDEIRSAGFVPDVVTWNTLLAVFGQNGLD 438
Query: 221 EKARKLFALMAERGVQQSTVTYNSLMSFETN---YKEVSKIYDQMQRAGLQPDVVSYALL 277
+ +F M + G TY SL+S + + + +IY +M AG+ PD+ +Y +
Sbjct: 439 TEVSGVFKEMKKSGYVPERDTYVSLISSYSRCGLFDQAMEIYKRMIEAGIHPDISTYNAV 498
Query: 278 INAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTV--------- 328
++A + R E+A +F EM + RP +Y+ LL A+A + +D+ +++
Sbjct: 499 LSALARGGRWEQAEKLFAEMENLDSRPDELSYSSLLHAYANAKKLDKMKSLSEDIYAERI 558
Query: 329 --------------------------FKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEK 362
F +RR RCS DI M+S Y ++ E+
Sbjct: 559 ESHNGLVKTLVLVNSKVNNLSDTEKAFLELRRRRCSLDINVLNAMISIYGKNGMVKKVEE 618
Query: 363 FFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYG 422
+K+ + TY +L+ Y+++ + EK I +++ + +P++ + T++ AYG
Sbjct: 619 ILSLMKESSINLSTATYNSLMHMYSRLGDCEKCENILTEIKSSRARPDRYSYNTMIYAYG 678
Query: 423 KNKDFDSAVVWYKEMESCGFPPDQKAKNILL 453
+ A + EM+ G PD NI +
Sbjct: 679 RKGQMKEASRLFSEMKCSGLVPDIVTYNIFV 709
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 81/306 (26%), Positives = 148/306 (48%), Gaps = 35/306 (11%)
Query: 99 FLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQ 158
++ LI++Y + G F++A ++ M + G P + ++ A++ A RGGR++ AE +F M+
Sbjct: 460 YVSLISSYSRCGLFDQAMEIYKRMIEAGIHPDISTYNAVLSALARGGRWEQAEKLFAEME 519
Query: 159 SSGPRPSALTYQIILKLFVEANKFKE----AEEVFM---------------------TLL 193
+ RP L+Y +L + A K + +E+++ L
Sbjct: 520 NLDSRPDELSYSSLLHAYANAKKLDKMKSLSEDIYAERIESHNGLVKTLVLVNSKVNNLS 579
Query: 194 DEEKSPLK-------PDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLM 246
D EK+ L+ D + + MI +Y K G +K ++ +LM E + ST TYNSLM
Sbjct: 580 DTEKAFLELRRRRCSLDINVLNAMISIYGKNGMVKKVEEILSLMKESSINLSTATYNSLM 639
Query: 247 SFETNYKEVSK---IYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVR 303
+ + K I +++ + +PD SY +I AYG+ + +EA +F EM +G+
Sbjct: 640 HMYSRLGDCEKCENILTEIKSSRARPDRYSYNTMIYAYGRKGQMKEASRLFSEMKCSGLV 699
Query: 304 PTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKF 363
P YNI + ++ + M ++A + + M C P+ +Y T+L Y + + + F
Sbjct: 700 PDIVTYNIFVKSYVANSMFEEAIDLVRYMVTHGCKPNERTYNTILQEYCSHGRIADGKSF 759
Query: 364 FRRLKQ 369
L +
Sbjct: 760 ISNLPE 765
>gi|449435168|ref|XP_004135367.1| PREDICTED: pentatricopeptide repeat-containing protein At5g04810,
chloroplastic-like [Cucumis sativus]
Length = 962
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 102/413 (24%), Positives = 192/413 (46%), Gaps = 40/413 (9%)
Query: 76 WNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHT 135
W V E ++ S ++ +++ Y ++GD ++A + M +G PS +T
Sbjct: 296 WQAVVSAFERIKKPS-----RKEYGLMVNYYTRRGDMHRARETFEKMRARGIEPSSHVYT 350
Query: 136 ALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANK-------FKEAEEV 188
L+ AY G + A + R+M+ G S +TY I++ F + F+EA+E
Sbjct: 351 NLIHAYAVGRDMEEALSCVRKMKEEGIEMSLVTYSILVSGFAKTGNAESADHWFQEAKEK 410
Query: 189 FMTL-----------------LDEEKSPLKPDQK--------MFHMMIYMYKKAGGYEKA 223
+L +D+ ++ ++ ++ ++H M+ Y G +K
Sbjct: 411 HSSLNAIIYGNIIYAYCQRCNMDKAEALVREMEEEGIDAPIDIYHTMMDGYTMVGDEDKC 470
Query: 224 RKLFALMAERGVQQSTVTYNSLMSFETNYKEVSK---IYDQMQRAGLQPDVVSYALLINA 280
+F E G+ S +TY L++ +VSK + +M+ AG++ ++ +Y++LIN
Sbjct: 471 LLVFERFKECGLNPSVITYGCLINLYAKLGKVSKALEVSKEMEHAGIKHNMKTYSMLING 530
Query: 281 YGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPD 340
+ K + A A+FE+++ G++P YN ++ AF G +D+A K M++ R P
Sbjct: 531 FLKLKDWANAFAIFEDLIKDGIKPDVVLYNNIITAFCGMGKMDRAVCTVKEMQKQRHKPT 590
Query: 341 ICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYD 400
++ ++ + +M+ A F ++ G +P V TY LI G + +EK +I D
Sbjct: 591 TRTFMPIIHGFARKGEMKKALDVFDMMRMSGCIPTVHTYNALILGLVEKRKMEKAEQILD 650
Query: 401 KMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILL 453
+M + G+ PN+ +TTIM Y D A ++ ++ G D LL
Sbjct: 651 EMTLAGVSPNEHTYTTIMHGYASLGDTGKAFTYFTKLRDEGLQLDVYTYEALL 703
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 132/482 (27%), Positives = 224/482 (46%), Gaps = 27/482 (5%)
Query: 59 PKDLVLGTLV----RLKQLKKWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNK 114
P + G L+ +L ++ K VS+ +E I+ N + MLI + K D+
Sbjct: 484 PSVITYGCLINLYAKLGKVSKALEVSKEMEHAGIK----HNMKTYSMLINGFLKLKDWAN 539
Query: 115 AEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILK 174
A + + K G P VV + ++ A+ G+ A + MQ +P+ T+ I+
Sbjct: 540 AFAIFEDLIKDGIKPDVVLYNNIITAFCGMGKMDRAVCTVKEMQKQRHKPTTRTFMPIIH 599
Query: 175 LFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERG 234
F + K+A +VF + S P ++ +I + EKA ++ M G
Sbjct: 600 GFARKGEMKKALDVFDMM---RMSGCIPTVHTYNALILGLVEKRKMEKAEQILDEMTLAG 656
Query: 235 VQQSTVTYNSLMSFETNYKEVSKIYD---QMQRAGLQPDVVSYALLINAYGKARREEEAL 291
V + TY ++M + + K + +++ GLQ DV +Y L+ A K+ R + AL
Sbjct: 657 VSPNEHTYTTIMHGYASLGDTGKAFTYFTKLRDEGLQLDVYTYEALLKACCKSGRMQSAL 716
Query: 292 AVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAY 351
AV +EM + YNIL+D +A G + +A + + M+R+ PDI +YT+ ++A
Sbjct: 717 AVTKEMSAQNIPRNTFIYNILIDGWARRGDIWEAADLMQQMKREGVQPDIHTYTSFINAC 776
Query: 352 VNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQ 411
A DM+ A K +K G PNV TY TLI G+A+ + EK + +++M+++G+KP++
Sbjct: 777 SKAGDMQRATKTIEEMKSVGVKPNVKTYTTLINGWARASLPEKALSCFEEMKLSGLKPDR 836
Query: 412 TIFTTIMDAYGKNKDFDSAVVW------YKEMESCGFPPDQKA----KNILLSLAKTADE 461
++ +M + ++ +EM C D LL + +T E
Sbjct: 837 AVYHCLMTSLLSRATVAHGCIYPGILSVCREMVDCELTVDMGTAVHWSKCLLKIERTGGE 896
Query: 462 RNEANELLGNFNHPNNEPGINGLSISVDEEDDDDDDDEDDDDNIYHDGDGDGDGDDNEDD 521
EA L PN N L+ S + DD+ D +D+DD+I +G GDD E D
Sbjct: 897 ITEA---LQKTFPPNWNVYNNTLTNSNIDSDDESDISDDEDDDICQEGASSNAGDDGESD 953
Query: 522 AE 523
+
Sbjct: 954 GD 955
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 67/257 (26%), Positives = 127/257 (49%), Gaps = 3/257 (1%)
Query: 201 KPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLM---SFETNYKEVSK 257
KP +K + +M+ Y + G +AR+ F M RG++ S+ Y +L+ + + +E
Sbjct: 308 KPSRKEYGLMVNYYTRRGDMHRARETFEKMRARGIEPSSHVYTNLIHAYAVGRDMEEALS 367
Query: 258 IYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFA 317
+M+ G++ +V+Y++L++ + K E A F+E + Y ++ A+
Sbjct: 368 CVRKMKEEGIEMSLVTYSILVSGFAKTGNAESADHWFQEAKEKHSSLNAIIYGNIIYAYC 427
Query: 318 ISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVI 377
+D+A + + M + I Y TM+ Y D + F R K+ G P+VI
Sbjct: 428 QRCNMDKAEALVREMEEEGIDAPIDIYHTMMDGYTMVGDEDKCLLVFERFKECGLNPSVI 487
Query: 378 TYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEM 437
TYG LI YAK+ + K +E+ +M GIK N ++ +++ + K KD+ +A ++++
Sbjct: 488 TYGCLINLYAKLGKVSKALEVSKEMEHAGIKHNMKTYSMLINGFLKLKDWANAFAIFEDL 547
Query: 438 ESCGFPPDQKAKNILLS 454
G PD N +++
Sbjct: 548 IKDGIKPDVVLYNNIIT 564
Score = 88.6 bits (218), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 51/224 (22%), Positives = 105/224 (46%), Gaps = 4/224 (1%)
Query: 251 NYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYN 310
N++ V ++++++ P Y L++N Y + A FE+M G+ P+ Y
Sbjct: 295 NWQAVVSAFERIKK----PSRKEYGLMVNYYTRRGDMHRARETFEKMRARGIEPSSHVYT 350
Query: 311 ILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQD 370
L+ A+A+ +++A + + M+ + + +Y+ ++S + + E A+ +F+ K+
Sbjct: 351 NLIHAYAVGRDMEEALSCVRKMKEEGIEMSLVTYSILVSGFAKTGNAESADHWFQEAKEK 410
Query: 371 GFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSA 430
N I YG +I Y + N++K + +M GI I+ T+MD Y D D
Sbjct: 411 HSSLNAIIYGNIIYAYCQRCNMDKAEALVREMEEEGIDAPIDIYHTMMDGYTMVGDEDKC 470
Query: 431 VVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNH 474
++ ++ + CG P L++L + ++A E+ H
Sbjct: 471 LLVFERFKECGLNPSVITYGCLINLYAKLGKVSKALEVSKEMEH 514
>gi|356577033|ref|XP_003556634.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39710-like [Glycine max]
Length = 757
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 91/364 (25%), Positives = 180/364 (49%), Gaps = 8/364 (2%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + ++I QGD K + M K+G +P+VV++ L++A + + K A A+
Sbjct: 206 NVYTYNVIIRGVVSQGDLEKGLGFMRKMEKEGISPNVVTYNTLIDASCKKKKVKEAMALL 265
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSP-LKPDQKMFHMMIYM 213
R M G + ++Y ++ + E E L++E + L PD+ ++ ++
Sbjct: 266 RAMAVGGVAANLISYNSVINGLCGKGRMSEVGE----LVEEMRGKGLVPDEVTYNTLVNG 321
Query: 214 YKKAGGYEKARKLFALMAERGVQQSTVTYNSL---MSFETNYKEVSKIYDQMQRAGLQPD 270
+ K G + L + M +G+ + VTY +L M N +I+DQM+ GL+P+
Sbjct: 322 FCKEGNLHQGLVLLSEMVGKGLSPNVVTYTTLINCMCKAGNLSRAVEIFDQMRVRGLRPN 381
Query: 271 VVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFK 330
+Y LI+ + + EA V EM+ +G P+ YN L+ + G V +A + +
Sbjct: 382 ERTYTTLIDGFCQKGLMNEAYKVLSEMIVSGFSPSVVTYNALVHGYCFLGRVQEAVGILR 441
Query: 331 CMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVN 390
M PD+ SY+T+++ + ++ A + + + G +P+ +TY +LI+G
Sbjct: 442 GMVERGLPPDVVSYSTVIAGFCRERELGKAFQMKEEMVEKGVLPDTVTYSSLIQGLCLQQ 501
Query: 391 NLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKN 450
L + +++ +M G+ P++ +T++++AY + + A+ + EM GF PD +
Sbjct: 502 KLVEAFDLFREMMRRGLPPDEVTYTSLINAYCVDGELSKALRLHDEMVQRGFLPDNVTYS 561
Query: 451 ILLS 454
+L++
Sbjct: 562 VLIN 565
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 93/355 (26%), Positives = 173/355 (48%), Gaps = 11/355 (3%)
Query: 99 FLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGR-----YKNAEAI 153
F +++ + + G KA +L N+ G+AP+V+S+ A+++A R Y +AE +
Sbjct: 135 FDLVVKSLSRLGFVPKALTLLHLANRHGFAPTVLSYNAVLDALLRRSSSNHRDYDDAERV 194
Query: 154 FRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYM 213
FR M +G P+ TY +I++ V ++ FM + EK + P+ ++ +I
Sbjct: 195 FRDMVRNGVSPNVYTYNVIIRGVVSQGDLEKGLG-FMRKM--EKEGISPNVVTYNTLIDA 251
Query: 214 YKKAGGYEKARKLFALMAERGVQQSTVTYNSL---MSFETNYKEVSKIYDQMQRAGLQPD 270
K ++A L MA GV + ++YNS+ + + EV ++ ++M+ GL PD
Sbjct: 252 SCKKKKVKEAMALLRAMAVGGVAANLISYNSVINGLCGKGRMSEVGELVEEMRGKGLVPD 311
Query: 271 VVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFK 330
V+Y L+N + K + L + EM+ G+ P Y L++ +G + +A +F
Sbjct: 312 EVTYNTLVNGFCKEGNLHQGLVLLSEMVGKGLSPNVVTYTTLINCMCKAGNLSRAVEIFD 371
Query: 331 CMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVN 390
MR P+ +YTT++ + M A K + GF P+V+TY L+ GY +
Sbjct: 372 QMRVRGLRPNERTYTTLIDGFCQKGLMNEAYKVLSEMIVSGFSPSVVTYNALVHGYCFLG 431
Query: 391 NLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPD 445
+++ + I M G+ P+ ++T++ + + ++ A +EM G PD
Sbjct: 432 RVQEAVGILRGMVERGLPPDVVSYSTVIAGFCRERELGKAFQMKEEMVEKGVLPD 486
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 96/412 (23%), Positives = 189/412 (45%), Gaps = 22/412 (5%)
Query: 79 VSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALM 138
V E++E +R + +E+ + L+ + K+G+ ++ +LS M KG +P+VV++T L+
Sbjct: 296 VGELVEEMRGKGLVP-DEVTYNTLVNGFCKEGNLHQGLVLLSEMVGKGLSPNVVTYTTLI 354
Query: 139 EAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKS 198
+ G A IF +M+ G RP+ TY ++ F + EA +V ++ S
Sbjct: 355 NCMCKAGNLSRAVEIFDQMRVRGLRPNERTYTTLIDGFCQKGLMNEAYKVLSEMI---VS 411
Query: 199 PLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSKI 258
P ++ +++ Y G ++A + M ERG+ V+Y+++++ +E+ K
Sbjct: 412 GFSPSVVTYNALVHGYCFLGRVQEAVGILRGMVERGLPPDVVSYSTVIAGFCRERELGKA 471
Query: 259 Y---DQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDA 315
+ ++M G+ PD V+Y+ LI ++ EA +F EM+ G+ P Y L++A
Sbjct: 472 FQMKEEMVEKGVLPDTVTYSSLIQGLCLQQKLVEAFDLFREMMRRGLPPDEVTYTSLINA 531
Query: 316 FAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPN 375
+ + G + +A + M + PD +Y+ +++ + + A++ +L + VP+
Sbjct: 532 YCVDGELSKALRLHDEMVQRGFLPDNVTYSVLINGLNKKARTKVAKRLLLKLFYEESVPD 591
Query: 376 VITYGTLI---------------KGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDA 420
+TY TLI KG+ + + ++ M KPN I+ ++
Sbjct: 592 DVTYNTLIENCSNNEFKSVEGLVKGFCMKGLMNEADRVFKTMLQRNHKPNAAIYNLMIHG 651
Query: 421 YGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNF 472
+ + + A Y E+E F A L+ +E + LL N
Sbjct: 652 HSRGGNVHKAYNLYMELEHSSFACHTVAVIALVKALAREGMNDELSRLLQNI 703
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 91/373 (24%), Positives = 168/373 (45%), Gaps = 12/373 (3%)
Query: 59 PKDLVLGTLVRLKQLKKWNVVSEVLEWLRIQSWWDF--NEMDFLMLITAYGKQGDFNKAE 116
P + TL+ KK V E + LR + N + + +I +G ++
Sbjct: 240 PNVVTYNTLIDASCKKKK--VKEAMALLRAMAVGGVAANLISYNSVINGLCGKGRMSEVG 297
Query: 117 KVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLF 176
+++ M KG P V++ L+ + + G + M G P+ +TY ++
Sbjct: 298 ELVEEMRGKGLVPDEVTYNTLVNGFCKEGNLHQGLVLLSEMVGKGLSPNVVTYTTLINCM 357
Query: 177 VEANKFKEAEEVFMTLLDEEK-SPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGV 235
+A A E+F D+ + L+P+++ + +I + + G +A K+ + M G
Sbjct: 358 CKAGNLSRAVEIF----DQMRVRGLRPNERTYTTLIDGFCQKGLMNEAYKVLSEMIVSGF 413
Query: 236 QQSTVTYNSLM---SFETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALA 292
S VTYN+L+ F +E I M GL PDVVSY+ +I + + R +A
Sbjct: 414 SPSVVTYNALVHGYCFLGRVQEAVGILRGMVERGLPPDVVSYSTVIAGFCRERELGKAFQ 473
Query: 293 VFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYV 352
+ EEM++ GV P Y+ L+ + + +A +F+ M R PD +YT++++AY
Sbjct: 474 MKEEMVEKGVLPDTVTYSSLIQGLCLQQKLVEAFDLFREMMRRGLPPDEVTYTSLINAYC 533
Query: 353 NASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQT 412
++ A + + Q GF+P+ +TY LI G K + + K+ P+
Sbjct: 534 VDGELSKALRLHDEMVQRGFLPDNVTYSVLINGLNKKARTKVAKRLLLKLFYEESVPDDV 593
Query: 413 IFTTIMDAYGKNK 425
+ T+++ N+
Sbjct: 594 TYNTLIENCSNNE 606
Score = 122 bits (305), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 67/237 (28%), Positives = 119/237 (50%), Gaps = 3/237 (1%)
Query: 220 YEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSK---IYDQMQRAGLQPDVVSYAL 276
Y+ A ++F M GV + TYN ++ + ++ K +M++ G+ P+VV+Y
Sbjct: 188 YDDAERVFRDMVRNGVSPNVYTYNVIIRGVVSQGDLEKGLGFMRKMEKEGISPNVVTYNT 247
Query: 277 LINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDR 336
LI+A K ++ +EA+A+ M GV +YN +++ G + + + + MR
Sbjct: 248 LIDASCKKKKVKEAMALLRAMAVGGVAANLISYNSVINGLCGKGRMSEVGELVEEMRGKG 307
Query: 337 CSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMM 396
PD +Y T+++ + ++ + G PNV+TY TLI K NL + +
Sbjct: 308 LVPDEVTYNTLVNGFCKEGNLHQGLVLLSEMVGKGLSPNVVTYTTLINCMCKAGNLSRAV 367
Query: 397 EIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILL 453
EI+D+MRV G++PN+ +TT++D + + + A EM GF P N L+
Sbjct: 368 EIFDQMRVRGLRPNERTYTTLIDGFCQKGLMNEAYKVLSEMIVSGFSPSVVTYNALV 424
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 98/211 (46%), Gaps = 5/211 (2%)
Query: 264 RAGLQPDVVSY-----ALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAI 318
R G P V+SY ALL + R ++A VF +M+ GV P YN+++
Sbjct: 160 RHGFAPTVLSYNAVLDALLRRSSSNHRDYDDAERVFRDMVRNGVSPNVYTYNVIIRGVVS 219
Query: 319 SGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVIT 378
G +++ + M ++ SP++ +Y T++ A ++ A R + G N+I+
Sbjct: 220 QGDLEKGLGFMRKMEKEGISPNVVTYNTLIDASCKKKKVKEAMALLRAMAVGGVAANLIS 279
Query: 379 YGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEME 438
Y ++I G + ++ E+ ++MR G+ P++ + T+++ + K + +V EM
Sbjct: 280 YNSVINGLCGKGRMSEVGELVEEMRGKGLVPDEVTYNTLVNGFCKEGNLHQGLVLLSEMV 339
Query: 439 SCGFPPDQKAKNILLSLAKTADERNEANELL 469
G P+ L++ A + A E+
Sbjct: 340 GKGLSPNVVTYTTLINCMCKAGNLSRAVEIF 370
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 79/167 (47%), Gaps = 5/167 (2%)
Query: 308 AYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYV-----NASDMEGAEK 362
+++++ + + G V +A T+ R +P + SY +L A + N D + AE+
Sbjct: 134 VFDLVVKSLSRLGFVPKALTLLHLANRHGFAPTVLSYNAVLDALLRRSSSNHRDYDDAER 193
Query: 363 FFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYG 422
FR + ++G PNV TY +I+G +LEK + KM GI PN + T++DA
Sbjct: 194 VFRDMVRNGVSPNVYTYNVIIRGVVSQGDLEKGLGFMRKMEKEGISPNVVTYNTLIDASC 253
Query: 423 KNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELL 469
K K A+ + M G + + N +++ +E EL+
Sbjct: 254 KKKKVKEAMALLRAMAVGGVAANLISYNSVINGLCGKGRMSEVGELV 300
>gi|414865374|tpg|DAA43931.1| TPA: hypothetical protein ZEAMMB73_168023 [Zea mays]
Length = 793
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 129/499 (25%), Positives = 227/499 (45%), Gaps = 39/499 (7%)
Query: 41 VGSAVAVLRSERTRGQPLPKDLVLGTLV----RLKQLKKWNVVSEVLEWLRIQS-WWDFN 95
+G A +L + G +P TLV RL +K+ V E + + W +N
Sbjct: 260 LGEARTLLARMKKEGI-VPTRATYNTLVSAYARLGWIKQATDVVEAMTAFGFEPDLWTYN 318
Query: 96 EMDFLMLITAYGKQGDFNKAEKVLSFMNKKG-YAPSVVSHTALMEAYGRGGRYKNAEAIF 154
+L + G ++A K+ M + G +P VV++ L++A + R +A +
Sbjct: 319 -----VLAAGLCQAGKVDEAFKLKDEMEQLGIVSPDVVTYNTLVDACFKCQRSSDALNLL 373
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
M+ G + S +T+ II+K + +EA + +E L PD ++ +I
Sbjct: 374 EEMREKGVKSSLVTHNIIVKGLCREGQLEEALGRLEMMTEEG---LTPDVITYNTLIDAS 430
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSLM---SFETNYKEVSKIYDQMQRAGLQPDV 271
KAG KA L M G++ T T N+L+ E Y+E ++ + G PD
Sbjct: 431 CKAGNVAKAFVLMDEMVRSGLKMDTFTLNTLLYNLCKEKRYEEAEELLRAPPQRGFVPDE 490
Query: 272 VSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKC 331
VSY ++ AY K + E AL +++EM+ + P+ YN L+ + G + +A
Sbjct: 491 VSYGTVMAAYFKEYKPEPALCLWDEMIKRKLTPSISTYNTLIKGLSTMGKLTEAIDKLNE 550
Query: 332 MRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNN 391
+ PD +Y ++ AY D+E A +F ++ ++ F P+V+T TL+ G
Sbjct: 551 LMEMGLVPDDTTYNIIIHAYCKEGDLEKAFQFHNKMVENSFKPDVVTCNTLMNGLCLYGR 610
Query: 392 LEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNI 451
LEK M++++ G K + + T++ A K+ D D+A+ ++ +ME G PD N+
Sbjct: 611 LEKAMKLFESWVEKGKKVDVITYNTLIQALCKDNDVDTALRFFADMEVRGLQPDVFTYNV 670
Query: 452 LLSLAKTA----------DERNEANELLGNFNHPNNEPGINGLSISVDEEDDDDDDDEDD 501
LLS A + NE+ +L G F +P+ + + + E D + + D
Sbjct: 671 LLSALSEAGRSVEAQKMLHKLNESGKLYGRFFYPSIKSSVEAV------ETGKDPEVKSD 724
Query: 502 DDNIYHDGDGDGDGDDNED 520
+++ G+ GDD E
Sbjct: 725 IESV-----GNTQGDDQES 738
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 94/356 (26%), Positives = 168/356 (47%), Gaps = 5/356 (1%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
L+ A+ ++G +A +L+ M K+G P+ ++ L+ AY R G K A + M + G
Sbjct: 250 LLNAHCRKGMLGEARTLLARMKKEGIVPTRATYNTLVSAYARLGWIKQATDVVEAMTAFG 309
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
P TY ++ +A K EA ++ + E+ + PD ++ ++ K
Sbjct: 310 FEPDLWTYNVLAAGLCQAGKVDEAFKLKDEM--EQLGIVSPDVVTYNTLVDACFKCQRSS 367
Query: 222 KARKLFALMAERGVQQSTVTYNSL---MSFETNYKEVSKIYDQMQRAGLQPDVVSYALLI 278
A L M E+GV+ S VT+N + + E +E + M GL PDV++Y LI
Sbjct: 368 DALNLLEEMREKGVKSSLVTHNIIVKGLCREGQLEEALGRLEMMTEEGLTPDVITYNTLI 427
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCS 338
+A KA +A + +EM+ +G++ N LL ++A + + +
Sbjct: 428 DASCKAGNVAKAFVLMDEMVRSGLKMDTFTLNTLLYNLCKEKRYEEAEELLRAPPQRGFV 487
Query: 339 PDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEI 398
PD SY T+++AY E A + + + P++ TY TLIKG + + L + ++
Sbjct: 488 PDEVSYGTVMAAYFKEYKPEPALCLWDEMIKRKLTPSISTYNTLIKGLSTMGKLTEAIDK 547
Query: 399 YDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLS 454
+++ G+ P+ T + I+ AY K D + A ++ +M F PD N L++
Sbjct: 548 LNELMEMGLVPDDTTYNIIIHAYCKEGDLEKAFQFHNKMVENSFKPDVVTCNTLMN 603
Score = 126 bits (316), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 114/462 (24%), Positives = 197/462 (42%), Gaps = 25/462 (5%)
Query: 4 LAPRKFMQKRRKVEVFKDAADEAGKKNWRRLMNQIEEVGSAVAVLRSERTRGQPLPK--- 60
L P + + + A +A + RL ++ + A +L S R RG P
Sbjct: 119 LDPLRHLHRHLLASFPTSALADAALSTYARL--RLPHL--AAQLLHSFRRRGCVRPSLQA 174
Query: 61 -DLVLGTLVRLKQLKKWNVVS--EVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEK 117
+ VL L R + L LR+ N F +L+ + +G A
Sbjct: 175 ANAVLSALARSPSTSPQASLDAFHSLIALRLHP----NHYTFNLLVHTHCSKGTLADALS 230
Query: 118 VLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFV 177
LS M G +P V++ L+ A+ R G A + RM+ G P+ TY ++ +
Sbjct: 231 TLSKMQGFGLSPDAVTYNTLLNAHCRKGMLGEARTLLARMKKEGIVPTRATYNTLVSAYA 290
Query: 178 EANKFKEAEEVF--MTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERG- 234
K+A +V MT E PD ++++ +AG ++A KL M + G
Sbjct: 291 RLGWIKQATDVVEAMTAFGFE-----PDLWTYNVLAAGLCQAGKVDEAFKLKDEMEQLGI 345
Query: 235 VQQSTVTYNSLM--SFETN-YKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEAL 291
V VTYN+L+ F+ + + ++M+ G++ +V++ +++ + + EEAL
Sbjct: 346 VSPDVVTYNTLVDACFKCQRSSDALNLLEEMREKGVKSSLVTHNIIVKGLCREGQLEEAL 405
Query: 292 AVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAY 351
E M + G+ P YN L+DA +G V +A + M R D + T+L
Sbjct: 406 GRLEMMTEEGLTPDVITYNTLIDASCKAGNVAKAFVLMDEMVRSGLKMDTFTLNTLLYNL 465
Query: 352 VNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQ 411
E AE+ R Q GFVP+ ++YGT++ Y K E + ++D+M + P+
Sbjct: 466 CKEKRYEEAEELLRAPPQRGFVPDEVSYGTVMAAYFKEYKPEPALCLWDEMIKRKLTPSI 525
Query: 412 TIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILL 453
+ + T++ A+ E+ G PD NI++
Sbjct: 526 STYNTLIKGLSTMGKLTEAIDKLNELMEMGLVPDDTTYNIII 567
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 68/274 (24%), Positives = 119/274 (43%), Gaps = 4/274 (1%)
Query: 200 LKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETN---YKEVS 256
L P+ F+++++ + G A + M G+ VTYN+L++ E
Sbjct: 205 LHPNHYTFNLLVHTHCSKGTLADALSTLSKMQGFGLSPDAVTYNTLLNAHCRKGMLGEAR 264
Query: 257 KIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAF 316
+ +M++ G+ P +Y L++AY + ++A V E M G P YN+L
Sbjct: 265 TLLARMKKEGIVPTRATYNTLVSAYARLGWIKQATDVVEAMTAFGFEPDLWTYNVLAAGL 324
Query: 317 AISGMVDQARTVFKCMRR-DRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPN 375
+G VD+A + M + SPD+ +Y T++ A A +++ G +
Sbjct: 325 CQAGKVDEAFKLKDEMEQLGIVSPDVVTYNTLVDACFKCQRSSDALNLLEEMREKGVKSS 384
Query: 376 VITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYK 435
++T+ ++KG + LE+ + + M G+ P+ + T++DA K + A V
Sbjct: 385 LVTHNIIVKGLCREGQLEEALGRLEMMTEEGLTPDVITYNTLIDASCKAGNVAKAFVLMD 444
Query: 436 EMESCGFPPDQKAKNILLSLAKTADERNEANELL 469
EM G D N LL EA ELL
Sbjct: 445 EMVRSGLKMDTFTLNTLLYNLCKEKRYEEAEELL 478
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 47/210 (22%), Positives = 93/210 (44%), Gaps = 3/210 (1%)
Query: 263 QRAGLQPDVVSYALLINAYGKA--RREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISG 320
+R ++P + + +++A ++ + +L F ++ + P H +N+L+ G
Sbjct: 164 RRGCVRPSLQAANAVLSALARSPSTSPQASLDAFHSLIALRLHPNHYTFNLLVHTHCSKG 223
Query: 321 MVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYG 380
+ A + M+ SPD +Y T+L+A+ + A R+K++G VP TY
Sbjct: 224 TLADALSTLSKMQGFGLSPDAVTYNTLLNAHCRKGMLGEARTLLARMKKEGIVPTRATYN 283
Query: 381 TLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESC 440
TL+ YA++ +++ ++ + M G +P+ + + + D A EME
Sbjct: 284 TLVSAYARLGWIKQATDVVEAMTAFGFEPDLWTYNVLAAGLCQAGKVDEAFKLKDEMEQL 343
Query: 441 GF-PPDQKAKNILLSLAKTADERNEANELL 469
G PD N L+ ++A LL
Sbjct: 344 GIVSPDVVTYNTLVDACFKCQRSSDALNLL 373
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 79/347 (22%), Positives = 136/347 (39%), Gaps = 46/347 (13%)
Query: 47 VLRSERTRGQPLPKDLVLGTLVRLKQLKKWNVVSEVLEWLRIQSWWDF--NEMDFLMLIT 104
VL E R L TL L L K E E LR F +E+ + ++
Sbjct: 441 VLMDEMVRSGLKMDTFTLNTL--LYNLCKEKRYEEAEELLRAPPQRGFVPDEVSYGTVMA 498
Query: 105 AYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRP 164
AY K+ A + M K+ PS+ ++ L++ G+ A + G P
Sbjct: 499 AYFKEYKPEPALCLWDEMIKRKLTPSISTYNTLIKGLSTMGKLTEAIDKLNELMEMGLVP 558
Query: 165 SALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKAR 224
TY II+ + + ++A + +++ KPD + ++ G EKA
Sbjct: 559 DDTTYNIIIHAYCKEGDLEKAFQFHNKMVENS---FKPDVVTCNTLMNGLCLYGRLEKAM 615
Query: 225 KLFALMAERGVQQSTVTYNSLMSFETNYKEVS---KIYDQMQRAGLQPDVVSYALLINAY 281
KLF E+G + +TYN+L+ +V + + M+ GLQPDV +Y +L++A
Sbjct: 616 KLFESWVEKGKKVDVITYNTLIQALCKDNDVDTALRFFADMEVRGLQPDVFTYNVLLSAL 675
Query: 282 GKARREEEALAVFEEMLDAG------VRPTHKA--------------------------- 308
+A R EA + ++ ++G P+ K+
Sbjct: 676 SEAGRSVEAQKMLHKLNESGKLYGRFFYPSIKSSVEAVETGKDPEVKSDIESVGNTQGDD 735
Query: 309 ---YNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYV 352
YN + I G + +A+ V M + S D +Y T++ +
Sbjct: 736 QESYNKYIKELCIGGQLKEAKAVLDEMMQKGMSVDNSTYITLMEGLI 782
>gi|357499119|ref|XP_003619848.1| CCP [Medicago truncatula]
gi|355494863|gb|AES76066.1| CCP [Medicago truncatula]
Length = 556
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 108/437 (24%), Positives = 201/437 (45%), Gaps = 29/437 (6%)
Query: 31 WRRLMNQIEEVGSAVAVLRSERTRGQPLPKDLVLGTLVRLKQLKKWNVVSEVLEWLRIQS 90
W + E+G A +VL RG P ++ L T+ +K + EV Q
Sbjct: 125 WINCYCHLGEMGFAFSVLGIVLKRGYQ-PNNITLTTV-----MKGLCINGEV------QK 172
Query: 91 WWDFN-----------EMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALME 139
DF+ E+ + LI K G A ++L M + P++V + +++
Sbjct: 173 AMDFHDNVAAQGMLLDEVCYGTLINGLCKIGRSIDAFQLLQEMEGQVVKPNIVIYNMIID 232
Query: 140 AYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSP 199
++ + A ++ ++ G P LTY +++ F ++ E +++ ++++
Sbjct: 233 SFCKDELTCKARDLYLKIVDMGIDPDILTYTSLIRGFCRTGQWGEVKQLMCEMVNKN--- 289
Query: 200 LKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMS---FETNYKEVS 256
+ P+ F+++I + + G +A+ +F LM +RG Q VT+N+L+S N E
Sbjct: 290 INPNVYTFNVLIDAFCRKGKMIEAQGMFNLMVKRGQQPDIVTFNTLISGHCLHGNVLEAR 349
Query: 257 KIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAF 316
K++D + G+ PDV SY +LI Y K +R +EA+++F EM + Y+ L+D
Sbjct: 350 KLFDTVFERGILPDVWSYTILIIGYCKCKRIDEAVSLFNEMRCKNMVLDIVLYSSLIDGL 409
Query: 317 AISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNV 376
SG + A +F + D P++ +Y ++ A+ D++ + F+ + G P V
Sbjct: 410 CKSGRISYAWELFSTINNDGPPPNVITYNILIDAFCKIQDIDMGIELFKLMCGKGLTPTV 469
Query: 377 ITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKE 436
+TY LI GY K + + M + M+ + P+ + ++ D K+ A +K
Sbjct: 470 LTYNILINGYCKSKRIREAMNLLSVMQSKNLAPDSITYNSLFDGLCKSGRISDAWELFKV 529
Query: 437 MESCGFPPDQKAKNILL 453
M G P D N+LL
Sbjct: 530 MHVGGPPVDVATYNVLL 546
Score = 139 bits (349), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 104/437 (23%), Positives = 190/437 (43%), Gaps = 26/437 (5%)
Query: 56 QPLPK----DLVLGTLVRLKQ------LKKWNVVSEVLEWLRIQSWWDFNEMDFLMLITA 105
QPLP + ++G++V++K L K V V + S W I
Sbjct: 79 QPLPSVIQFNTIIGSVVKMKHCPVAISLLKQMVFKGVTPSIFTLSIW----------INC 128
Query: 106 YGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPS 165
Y G+ A VL + K+GY P+ ++ T +M+ G + A + + G
Sbjct: 129 YCHLGEMGFAFSVLGIVLKRGYQPNNITLTTVMKGLCINGEVQKAMDFHDNVAAQGMLLD 188
Query: 166 ALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARK 225
+ Y ++ K + + F L + E +KP+ +++M+I + K KAR
Sbjct: 189 EVCYGTLIN---GLCKIGRSIDAFQLLQEMEGQVVKPNIVIYNMIIDSFCKDELTCKARD 245
Query: 226 LFALMAERGVQQSTVTYNSLM---SFETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYG 282
L+ + + G+ +TY SL+ + EV ++ +M + P+V ++ +LI+A+
Sbjct: 246 LYLKIVDMGIDPDILTYTSLIRGFCRTGQWGEVKQLMCEMVNKNINPNVYTFNVLIDAFC 305
Query: 283 KARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDIC 342
+ + EA +F M+ G +P +N L+ + G V +AR +F + PD+
Sbjct: 306 RKGKMIEAQGMFNLMVKRGQQPDIVTFNTLISGHCLHGNVLEARKLFDTVFERGILPDVW 365
Query: 343 SYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKM 402
SYT ++ Y ++ A F ++ V +++ Y +LI G K + E++ +
Sbjct: 366 SYTILIIGYCKCKRIDEAVSLFNEMRCKNMVLDIVLYSSLIDGLCKSGRISYAWELFSTI 425
Query: 403 RVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADER 462
+G PN + ++DA+ K +D D + +K M G P NIL++ +
Sbjct: 426 NNDGPPPNVITYNILIDAFCKIQDIDMGIELFKLMCGKGLTPTVLTYNILINGYCKSKRI 485
Query: 463 NEANELLGNFNHPNNEP 479
EA LL N P
Sbjct: 486 REAMNLLSVMQSKNLAP 502
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 66/295 (22%), Positives = 139/295 (47%), Gaps = 6/295 (2%)
Query: 97 MDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRR 156
+ + LI + + G + + ++++ M K P+V + L++A+ R G+ A+ +F
Sbjct: 260 LTYTSLIRGFCRTGQWGEVKQLMCEMVNKNINPNVYTFNVLIDAFCRKGKMIEAQGMFNL 319
Query: 157 MQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKK 216
M G +P +T+ ++ EA ++F T+ + + PD + ++I Y K
Sbjct: 320 MVKRGQQPDIVTFNTLISGHCLHGNVLEARKLFDTVFERG---ILPDVWSYTILIIGYCK 376
Query: 217 AGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVS---KIYDQMQRAGLQPDVVS 273
++A LF M + + V Y+SL+ +S +++ + G P+V++
Sbjct: 377 CKRIDEAVSLFNEMRCKNMVLDIVLYSSLIDGLCKSGRISYAWELFSTINNDGPPPNVIT 436
Query: 274 YALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMR 333
Y +LI+A+ K + + + +F+ M G+ PT YNIL++ + S + +A + M+
Sbjct: 437 YNILIDAFCKIQDIDMGIELFKLMCGKGLTPTVLTYNILINGYCKSKRIREAMNLLSVMQ 496
Query: 334 RDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAK 388
+PD +Y ++ + + A + F+ + G +V TY L+ + K
Sbjct: 497 SKNLAPDSITYNSLFDGLCKSGRISDAWELFKVMHVGGPPVDVATYNVLLDAFCK 551
Score = 47.0 bits (110), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 42/237 (17%), Positives = 91/237 (38%), Gaps = 35/237 (14%)
Query: 288 EEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTM 347
++A+ +F +++ P+ +N ++ + A ++ K M +P I + +
Sbjct: 66 DDAVTLFNHLINMQPLPSVIQFNTIIGSVVKMKHCPVAISLLKQMVFKGVTPSIFTLSIW 125
Query: 348 LSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNG- 406
++ Y + +M A + + G+ PN IT T++KG ++K M+ +D + G
Sbjct: 126 INCYCHLGEMGFAFSVLGIVLKRGYQPNNITLTTVMKGLCINGEVQKAMDFHDNVAAQGM 185
Query: 407 ----------------------------------IKPNQTIFTTIMDAYGKNKDFDSAVV 432
+KPN I+ I+D++ K++ A
Sbjct: 186 LLDEVCYGTLINGLCKIGRSIDAFQLLQEMEGQVVKPNIVIYNMIIDSFCKDELTCKARD 245
Query: 433 WYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGINGLSISVD 489
Y ++ G PD L+ + E +L+ + N P + ++ +D
Sbjct: 246 LYLKIVDMGIDPDILTYTSLIRGFCRTGQWGEVKQLMCEMVNKNINPNVYTFNVLID 302
Score = 41.6 bits (96), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 29/159 (18%), Positives = 62/159 (38%), Gaps = 4/159 (2%)
Query: 322 VDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGT 381
+D A T+F + + P + + T++ + V A +++ G P++ T
Sbjct: 65 IDDAVTLFNHLINMQPLPSVIQFNTIIGSVVKMKHCPVAISLLKQMVFKGVTPSIFTLSI 124
Query: 382 LIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCG 441
I Y + + + + G +PN TT+M N + A+ ++ + + G
Sbjct: 125 WINCYCHLGEMGFAFSVLGIVLKRGYQPNNITLTTVMKGLCINGEVQKAMDFHDNVAAQG 184
Query: 442 FPPDQKAKNILLS----LAKTADERNEANELLGNFNHPN 476
D+ L++ + ++ D E+ G PN
Sbjct: 185 MLLDEVCYGTLINGLCKIGRSIDAFQLLQEMEGQVVKPN 223
>gi|4836917|gb|AAD30619.1|AC007153_11 similar to indole-3-acetate beta-glucosyltransferase [Arabidopsis
thaliana]
Length = 1184
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 101/393 (25%), Positives = 171/393 (43%), Gaps = 41/393 (10%)
Query: 94 FNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAI 153
+N + ++I + G +A +L M KGY P V+S++ ++ Y R G +
Sbjct: 687 WNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKL 746
Query: 154 FRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYM 213
M+ G +P++ Y I+ L K EAEE F ++ + + PD ++ +I
Sbjct: 747 IEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMI---RQGILPDTVVYTTLIDG 803
Query: 214 YKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFET---NYKEVSKIYDQMQRAGLQPD 270
+ K G A K F M R + +TY +++S + E K++ +M GL+PD
Sbjct: 804 FCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPD 863
Query: 271 VVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFK 330
V++ LIN Y KA ++A V M+ AG P Y L+D G +D A +
Sbjct: 864 SVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLH 923
Query: 331 CMRRDRCSPDI----------C-------------------------SYTTMLSAYVNAS 355
M + P+I C +YTT++ AY +
Sbjct: 924 EMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSG 983
Query: 356 DMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFT 415
+M+ A++ + + G P ++T+ L+ G+ LE ++ + M GI PN T F
Sbjct: 984 EMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFN 1043
Query: 416 TIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKA 448
+++ Y + +A YK+M S G PD K
Sbjct: 1044 SLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKT 1076
Score = 149 bits (375), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 91/343 (26%), Positives = 163/343 (47%), Gaps = 6/343 (1%)
Query: 114 KAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIIL 173
+AE+ S M ++G P V +T L++ + + G + A F M S P LTY I+
Sbjct: 777 EAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAII 836
Query: 174 KLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAER 233
F + EA ++F + + L+PD F +I Y KAG + A ++ M +
Sbjct: 837 SGFCQIGDMVEAGKLFHEMFCKG---LEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQA 893
Query: 234 GVQQSTVTYNSL---MSFETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEA 290
G + VTY +L + E + +++ +M + GLQP++ +Y ++N K+ EEA
Sbjct: 894 GCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEA 953
Query: 291 LAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSA 350
+ + E AG+ Y L+DA+ SG +D+A+ + K M P I ++ +++
Sbjct: 954 VKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNG 1013
Query: 351 YVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPN 410
+ +E EK + G PN T+ +L+K Y NNL+ IY M G+ P+
Sbjct: 1014 FCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPD 1073
Query: 411 QTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILL 453
+ ++ + K ++ A ++EM+ GF ++L+
Sbjct: 1074 GKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLI 1116
Score = 141 bits (356), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 83/352 (23%), Positives = 175/352 (49%), Gaps = 6/352 (1%)
Query: 99 FLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQ 158
+ LI + K+GD A K M+ + P V+++TA++ + + G A +F M
Sbjct: 797 YTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMF 856
Query: 159 SSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAG 218
G P ++T+ ++ + +A K+A V ++ ++ P+ + +I K G
Sbjct: 857 CKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMI---QAGCSPNVVTYTTLIDGLCKEG 913
Query: 219 GYEKARKLFALMAERGVQQSTVTYNSL---MSFETNYKEVSKIYDQMQRAGLQPDVVSYA 275
+ A +L M + G+Q + TYNS+ + N +E K+ + + AGL D V+Y
Sbjct: 914 DLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYT 973
Query: 276 LLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRD 335
L++AY K+ ++A + +EML G++PT +N+L++ F + GM++ + M
Sbjct: 974 TLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAK 1033
Query: 336 RCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKM 395
+P+ ++ +++ Y ++++ A ++ + G P+ TY L+KG+ K N+++
Sbjct: 1034 GIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEA 1093
Query: 396 MEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQK 447
++ +M+ G + + ++ ++ + K K F A + +M G D++
Sbjct: 1094 WFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKE 1145
Score = 139 bits (349), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 80/332 (24%), Positives = 161/332 (48%), Gaps = 6/332 (1%)
Query: 126 GYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEA 185
G +V S+ ++ + GR K A + M+ G P ++Y ++ + +F E
Sbjct: 684 GVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYC---RFGEL 740
Query: 186 EEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSL 245
++V+ + ++ LKP+ ++ +I + + +A + F+ M +G+ TV Y +L
Sbjct: 741 DKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTL 800
Query: 246 M---SFETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGV 302
+ + + SK + +M + PDV++Y +I+ + + EA +F EM G+
Sbjct: 801 IDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGL 860
Query: 303 RPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEK 362
P + L++ + +G + A V M + CSP++ +YTT++ D++ A +
Sbjct: 861 EPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANE 920
Query: 363 FFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYG 422
+ + G PN+ TY +++ G K N+E+ +++ + G+ + +TT+MDAY
Sbjct: 921 LLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYC 980
Query: 423 KNKDFDSAVVWYKEMESCGFPPDQKAKNILLS 454
K+ + D A KEM G P N+L++
Sbjct: 981 KSGEMDKAQEILKEMLGKGLQPTIVTFNVLMN 1012
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 95/382 (24%), Positives = 164/382 (42%), Gaps = 9/382 (2%)
Query: 110 GDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAI--FRRMQSSGPRPSAL 167
G +A +V M G SV S + + YK A AI FR G +
Sbjct: 632 GLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDC-YKTATAIIVFREFPEVGVCWNVA 690
Query: 168 TYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLF 227
+Y I++ + + KEA + + + E PD + ++ Y + G +K KL
Sbjct: 691 SYNIVIHFVCQLGRIKEAHHLLLLM---ELKGYTPDVISYSTVVNGYCRFGELDKVWKLI 747
Query: 228 ALMAERGVQQSTVTYNSLMSFET---NYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKA 284
+M +G++ ++ Y S++ E + + +M R G+ PD V Y LI+ + K
Sbjct: 748 EVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKR 807
Query: 285 RREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSY 344
A F EM + P Y ++ F G + +A +F M PD ++
Sbjct: 808 GDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTF 867
Query: 345 TTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRV 404
T +++ Y A M+ A + + Q G PNV+TY TLI G K +L+ E+ +M
Sbjct: 868 TELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWK 927
Query: 405 NGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNE 464
G++PN + +I++ K+ + + AV E E+ G D L+ + E ++
Sbjct: 928 IGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDK 987
Query: 465 ANELLGNFNHPNNEPGINGLSI 486
A E+L +P I ++
Sbjct: 988 AQEILKEMLGKGLQPTIVTFNV 1009
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 65/256 (25%), Positives = 123/256 (48%), Gaps = 6/256 (2%)
Query: 88 IQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRY 147
IQ+ N + + LI K+GD + A ++L M K G P++ ++ +++ + G
Sbjct: 891 IQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNI 950
Query: 148 KNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMF 207
+ A + +++G +TY ++ + ++ + +A+E+ +L + L+P F
Sbjct: 951 EEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKG---LQPTIVTF 1007
Query: 208 HMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLM---SFETNYKEVSKIYDQMQR 264
++++ + G E KL M +G+ + T+NSL+ N K + IY M
Sbjct: 1008 NVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCS 1067
Query: 265 AGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQ 324
G+ PD +Y L+ + KAR +EA +F+EM G + Y++L+ F +
Sbjct: 1068 RGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLE 1127
Query: 325 ARTVFKCMRRDRCSPD 340
AR VF MRR+ + D
Sbjct: 1128 AREVFDQMRREGLAAD 1143
Score = 78.6 bits (192), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 100/208 (48%), Gaps = 6/208 (2%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
+ + + L+ AY K G+ +KA+++L M KG P++V+ LM + G ++ E +
Sbjct: 968 DTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLL 1027
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
M + G P+A T+ ++K + N K A ++ D + PD K + ++ +
Sbjct: 1028 NWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYK---DMCSRGVGPDGKTYENLVKGH 1084
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSLMSF---ETNYKEVSKIYDQMQRAGLQPDV 271
KA ++A LF M +G S TY+ L+ + E +++DQM+R GL D
Sbjct: 1085 CKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADK 1144
Query: 272 VSYALLINAYGKARREEEALAVFEEMLD 299
+ + K +R + + +E+++
Sbjct: 1145 EIFDFFSDTKYKGKRPDTIVDPIDEIIE 1172
>gi|297807255|ref|XP_002871511.1| hypothetical protein ARALYDRAFT_350399 [Arabidopsis lyrata subsp.
lyrata]
gi|297317348|gb|EFH47770.1| hypothetical protein ARALYDRAFT_350399 [Arabidopsis lyrata subsp.
lyrata]
Length = 1202
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 100/375 (26%), Positives = 185/375 (49%), Gaps = 10/375 (2%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
LI + + GD AE+ ++ M KG +PSV ++ L+ YGR + + + M+ +G
Sbjct: 803 LIRTFCELGDMENAEQEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDLLKEMEDNG 862
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
P+ ++Y ++ + +K EA+ + D E + P+ ++++M+I G E
Sbjct: 863 TMPNVVSYGTLINCLCKGSKLLEAQ---IVKRDMEDRGVSPNVRIYNMLIDGCCSKGKIE 919
Query: 222 KARKLFALMAERGVQQSTVTYNSL---MSFETNYKEVSKIYDQMQRAGLQPDVVSYALLI 278
A + M ++G++ + VTYN+L +S E + ++ R GL+PDV +Y LI
Sbjct: 920 DAFRFSEEMFKKGIELNLVTYNTLIDGLSMNGKLAEAEDMLLEISRKGLKPDVFTYNSLI 979
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCS 338
+ Y A + +A++EEM +G++PT K Y++L+ G ++ + +F M
Sbjct: 980 SGYRFAGNVQRCIALYEEMKTSGIKPTLKTYHLLISLCTKEG-IELTKKIFGEMS---LQ 1035
Query: 339 PDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEI 398
PD+ Y +L Y DM+ A +++ + + TY +LI G KV L ++ +
Sbjct: 1036 PDLLVYNGVLHCYAVHGDMDKAFNLQKQMIEKSIGLDKTTYNSLILGQLKVGKLCEVRSL 1095
Query: 399 YDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKT 458
D+M+ ++P + I+ + + KD+ A VWY+EM+ G D + L+S K
Sbjct: 1096 IDEMKAREMEPEADTYDIIVKGHCEMKDYMGAYVWYREMQEKGLLLDVCIGDELVSGLKE 1155
Query: 459 ADERNEANELLGNFN 473
EA ++ N
Sbjct: 1156 EWRSKEAENVISEMN 1170
Score = 128 bits (322), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 89/367 (24%), Positives = 169/367 (46%), Gaps = 14/367 (3%)
Query: 97 MDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRR 156
+ F L+ K G AE VL+ M +G+ P + + L + Y + A ++
Sbjct: 658 ITFNTLLKGLFKAGMVEDAENVLTEMKDQGFVPDAFTFSILFDGYSSNDKADAALGVYET 717
Query: 157 MQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKK 216
SG + +A T I+L + + ++AEE+ L E L P++ +++ MI Y +
Sbjct: 718 AVDSGLKMNAYTCSILLNALCKEGQIEKAEEI---LGREMAKGLVPNEVLYNTMIDGYSR 774
Query: 217 AGGYEKARKLFALMAERGVQQSTVTYNSLM-------SFETNYKEVSKIYDQMQRAGLQP 269
G AR M ++G++ + YN L+ E +EV+K M+ G+ P
Sbjct: 775 KGDLVGARMKIDAMEKQGMKPDHLAYNCLIRTFCELGDMENAEQEVNK----MKLKGVSP 830
Query: 270 DVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVF 329
V +Y +LI YG+ ++ + +EM D G P +Y L++ + +A+ V
Sbjct: 831 SVETYNILIGGYGRKYEFDKCFDLLKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVK 890
Query: 330 KCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKV 389
+ M SP++ Y ++ + +E A +F + + G N++TY TLI G +
Sbjct: 891 RDMEDRGVSPNVRIYNMLIDGCCSKGKIEDAFRFSEEMFKKGIELNLVTYNTLIDGLSMN 950
Query: 390 NNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAK 449
L + ++ ++ G+KP+ + +++ Y + + Y+EM++ G P K
Sbjct: 951 GKLAEAEDMLLEISRKGLKPDVFTYNSLISGYRFAGNVQRCIALYEEMKTSGIKPTLKTY 1010
Query: 450 NILLSLA 456
++L+SL
Sbjct: 1011 HLLISLC 1017
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 104/429 (24%), Positives = 191/429 (44%), Gaps = 19/429 (4%)
Query: 34 LMNQIEEVGSAVAVLRSERTRGQPLPKD---LVLGTLVRLKQLK-KWNVVSEVLEWLRIQ 89
L+N+ + + A + + R G D L+L LV+ KQ + NV +LE
Sbjct: 491 LLNESKMISEAADLFFALRNEGIFPSSDSLTLLLDHLVKTKQFRVTINVFLNILES---- 546
Query: 90 SWWDFNEMDFLM--LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRY 147
DF F+ I A K D K ++ + M +P+V + L++ + +
Sbjct: 547 ---DFRPSKFMYGKAIQAAVKLSDVGKGLELFNRMKHDRISPTVFIYNVLIDGLCKVRQM 603
Query: 148 KNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMF 207
K+AE +F M + PS +TY ++ + K E+ F + ++P F
Sbjct: 604 KDAEQLFDEMLARRLLPSLITYNTLIDGYC---KDGNPEKSFKVRERMKADNIEPSLITF 660
Query: 208 HMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLM-SFETNYKEVSK--IYDQMQR 264
+ ++ KAG E A + M ++G T++ L + +N K + +Y+
Sbjct: 661 NTLLKGLFKAGMVEDAENVLTEMKDQGFVPDAFTFSILFDGYSSNDKADAALGVYETAVD 720
Query: 265 AGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQ 324
+GL+ + + ++L+NA K + E+A + + G+ P YN ++D ++ G +
Sbjct: 721 SGLKMNAYTCSILLNALCKEGQIEKAEEILGREMAKGLVPNEVLYNTMIDGYSRKGDLVG 780
Query: 325 ARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIK 384
AR M + PD +Y ++ + DME AE+ ++K G P+V TY LI
Sbjct: 781 ARMKIDAMEKQGMKPDHLAYNCLIRTFCELGDMENAEQEVNKMKLKGVSPSVETYNILIG 840
Query: 385 GYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPP 444
GY + +K ++ +M NG PN + T+++ K A + ++ME G P
Sbjct: 841 GYGRKYEFDKCFDLLKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSP 900
Query: 445 DQKAKNILL 453
+ + N+L+
Sbjct: 901 NVRIYNMLI 909
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 73/305 (23%), Positives = 147/305 (48%), Gaps = 6/305 (1%)
Query: 153 IFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIY 212
+F RM+ P+ Y +++ + + K+AE++F +L L P ++ +I
Sbjct: 574 LFNRMKHDRISPTVFIYNVLIDGLCKVRQMKDAEQLFDEMLARR---LLPSLITYNTLID 630
Query: 213 MYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMS--FETNYKE-VSKIYDQMQRAGLQP 269
Y K G EK+ K+ M ++ S +T+N+L+ F+ E + +M+ G P
Sbjct: 631 GYCKDGNPEKSFKVRERMKADNIEPSLITFNTLLKGLFKAGMVEDAENVLTEMKDQGFVP 690
Query: 270 DVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVF 329
D ++++L + Y + + AL V+E +D+G++ +ILL+A G +++A +
Sbjct: 691 DAFTFSILFDGYSSNDKADAALGVYETAVDSGLKMNAYTCSILLNALCKEGQIEKAEEIL 750
Query: 330 KCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKV 389
P+ Y TM+ Y D+ GA +++ G P+ + Y LI+ + ++
Sbjct: 751 GREMAKGLVPNEVLYNTMIDGYSRKGDLVGARMKIDAMEKQGMKPDHLAYNCLIRTFCEL 810
Query: 390 NNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAK 449
++E + +KM++ G+ P+ + ++ YG+ +FD KEME G P+ +
Sbjct: 811 GDMENAEQEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDLLKEMEDNGTMPNVVSY 870
Query: 450 NILLS 454
L++
Sbjct: 871 GTLIN 875
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 84/384 (21%), Positives = 166/384 (43%), Gaps = 6/384 (1%)
Query: 101 MLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSS 160
+LI K AE++ M + PS++++ L++ Y + G + + + RM++
Sbjct: 592 VLIDGLCKVRQMKDAEQLFDEMLARRLLPSLITYNTLIDGYCKDGNPEKSFKVRERMKAD 651
Query: 161 GPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGY 220
PS +T+ +LK +A ++AE V + D+ PD F ++ Y
Sbjct: 652 NIEPSLITFNTLLKGLFKAGMVEDAENVLTEMKDQ---GFVPDAFTFSILFDGYSSNDKA 708
Query: 221 EKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSKIYDQMQR---AGLQPDVVSYALL 277
+ A ++ + G++ + T + L++ ++ K + + R GL P+ V Y +
Sbjct: 709 DAALGVYETAVDSGLKMNAYTCSILLNALCKEGQIEKAEEILGREMAKGLVPNEVLYNTM 768
Query: 278 INAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRC 337
I+ Y + A + M G++P H AYN L+ F G ++ A M+
Sbjct: 769 IDGYSRKGDLVGARMKIDAMEKQGMKPDHLAYNCLIRTFCELGDMENAEQEVNKMKLKGV 828
Query: 338 SPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMME 397
SP + +Y ++ Y + + + ++ +G +PNV++YGTLI K + L +
Sbjct: 829 SPSVETYNILIGGYGRKYEFDKCFDLLKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQI 888
Query: 398 IYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAK 457
+ M G+ PN I+ ++D + A + +EM G + N L+
Sbjct: 889 VKRDMEDRGVSPNVRIYNMLIDGCCSKGKIEDAFRFSEEMFKKGIELNLVTYNTLIDGLS 948
Query: 458 TADERNEANELLGNFNHPNNEPGI 481
+ EA ++L + +P +
Sbjct: 949 MNGKLAEAEDMLLEISRKGLKPDV 972
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 69/317 (21%), Positives = 132/317 (41%), Gaps = 19/317 (5%)
Query: 173 LKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFH----------------MMIYMYKK 216
L++ ++ N+ + A V +LL + +P +++F ++ + +
Sbjct: 435 LRVLLQQNRIETARGVLYSLLRSDSAPFTSPKELFSAFSLSSPSLKHDFSYLLLSVLLNE 494
Query: 217 AGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVS---KIYDQMQRAGLQPDVVS 273
+ +A LF + G+ S+ + L+ K+ ++ + + +P
Sbjct: 495 SKMISEAADLFFALRNEGIFPSSDSLTLLLDHLVKTKQFRVTINVFLNILESDFRPSKFM 554
Query: 274 YALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMR 333
Y I A K + L +F M + PT YN+L+D + A +F M
Sbjct: 555 YGKAIQAAVKLSDVGKGLELFNRMKHDRISPTVFIYNVLIDGLCKVRQMKDAEQLFDEML 614
Query: 334 RDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLE 393
R P + +Y T++ Y + E + K R+K D P++IT+ TL+KG K +E
Sbjct: 615 ARRLLPSLITYNTLIDGYCKDGNPEKSFKVRERMKADNIEPSLITFNTLLKGLFKAGMVE 674
Query: 394 KMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILL 453
+ +M+ G P+ F+ + D Y N D+A+ Y+ G + +ILL
Sbjct: 675 DAENVLTEMKDQGFVPDAFTFSILFDGYSSNDKADAALGVYETAVDSGLKMNAYTCSILL 734
Query: 454 SLAKTADERNEANELLG 470
+ + +A E+LG
Sbjct: 735 NALCKEGQIEKAEEILG 751
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 64/282 (22%), Positives = 114/282 (40%), Gaps = 4/282 (1%)
Query: 220 YEKARKLFALMAERGVQQST-VTYNSLMSFETNYKEVSKIYD--QMQRAGLQPDVVSYAL 276
+EK R L L+ + ++ + V Y+ L S + +++ + L+ D SY L
Sbjct: 429 HEKLRNLRVLLQQNRIETARGVLYSLLRSDSAPFTSPKELFSAFSLSSPSLKHDF-SYLL 487
Query: 277 LINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDR 336
L +++ EA +F + + G+ P+ + +LLD + VF +
Sbjct: 488 LSVLLNESKMISEAADLFFALRNEGIFPSSDSLTLLLDHLVKTKQFRVTINVFLNILESD 547
Query: 337 CSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMM 396
P Y + A V SD+ + F R+K D P V Y LI G KV ++
Sbjct: 548 FRPSKFMYGKAIQAAVKLSDVGKGLELFNRMKHDRISPTVFIYNVLIDGLCKVRQMKDAE 607
Query: 397 EIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLA 456
+++D+M + P+ + T++D Y K+ + + + + M++ P N LL
Sbjct: 608 QLFDEMLARRLLPSLITYNTLIDGYCKDGNPEKSFKVRERMKADNIEPSLITFNTLLKGL 667
Query: 457 KTADERNEANELLGNFNHPNNEPGINGLSISVDEEDDDDDDD 498
A +A +L P SI D +D D
Sbjct: 668 FKAGMVEDAENVLTEMKDQGFVPDAFTFSILFDGYSSNDKAD 709
>gi|449521772|ref|XP_004167903.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g61400-like [Cucumis sativus]
Length = 645
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 97/335 (28%), Positives = 165/335 (49%), Gaps = 8/335 (2%)
Query: 115 AEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILK 174
E+ LS +K G A ++ + L+ + GR++ I+ M S+G PS +T+ ++
Sbjct: 131 VEEALSMYHKVGAALTIQACNVLLYVLVKTGRFELLWRIYEEMISNGLSPSVITFGTLID 190
Query: 175 LFVEANKFKEAEEVFMTLLDEEKSP-LKPDQKMFHMMIYMYKKAGGYEKARKLFALMAER 233
A+E+F DE + + P ++ ++I E+A + M E
Sbjct: 191 GCCRQGDLLRAQEMF----DEMRVKGIVPTVIVYTILIRGLCSDNKIEEAESMHRAMREV 246
Query: 234 GVQQSTVTYNSLM---SFETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEA 290
GV + TYN+LM N K+ ++Y M GL PDVV++ +LI+ K + A
Sbjct: 247 GVYPNVYTYNTLMDGYCKLANAKQALRLYQDMLGEGLVPDVVTFGILIDGLCKFGEMKAA 306
Query: 291 LAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSA 350
+F M+ V P YN L+DA+ G V +A +F + R SPD+ +Y+ ++
Sbjct: 307 RNLFVNMIKFSVTPNIAVYNSLIDAYCKVGDVSEAMALFLELERFEVSPDVFTYSILIRG 366
Query: 351 YVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPN 410
+ S E A F ++ ++G + N +TY +LI G K ++K +EI +M NG++PN
Sbjct: 367 LCSVSRTEEAGNIFEKMTKEGILANSVTYNSLIDGCCKEGKMDKALEICSQMTENGVEPN 426
Query: 411 QTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPD 445
F+T++D Y K ++ +A+ Y EM PD
Sbjct: 427 VITFSTLIDGYCKIRNLQAAMGIYSEMVIKSLSPD 461
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 90/343 (26%), Positives = 168/343 (48%), Gaps = 6/343 (1%)
Query: 97 MDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRR 156
+ F LI +QGD +A+++ M KG P+V+ +T L+ + + AE++ R
Sbjct: 183 ITFGTLIDGCCRQGDLLRAQEMFDEMRVKGIVPTVIVYTILIRGLCSDNKIEEAESMHRA 242
Query: 157 MQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKK 216
M+ G P+ TY ++ + + K+A ++ +L E L PD F ++I K
Sbjct: 243 MREVGVYPNVYTYNTLMDGYCKLANAKQALRLYQDMLGEG---LVPDVVTFGILIDGLCK 299
Query: 217 AGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSK---IYDQMQRAGLQPDVVS 273
G + AR LF M + V + YNSL+ +VS+ ++ +++R + PDV +
Sbjct: 300 FGEMKAARNLFVNMIKFSVTPNIAVYNSLIDAYCKVGDVSEAMALFLELERFEVSPDVFT 359
Query: 274 YALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMR 333
Y++LI R EEA +FE+M G+ YN L+D G +D+A + M
Sbjct: 360 YSILIRGLCSVSRTEEAGNIFEKMTKEGILANSVTYNSLIDGCCKEGKMDKALEICSQMT 419
Query: 334 RDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLE 393
+ P++ +++T++ Y +++ A + + P+V+TY +I G+ K +++
Sbjct: 420 ENGVEPNVITFSTLIDGYCKIRNLQAAMGIYSEMVIKSLSPDVVTYTAMIDGHCKYGSMK 479
Query: 394 KMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKE 436
+ +++Y M NGI PN + ++D K+ A+ + E
Sbjct: 480 EALKLYSDMLDNGITPNCYTISCLLDGLCKDGKISDALELFTE 522
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 84/358 (23%), Positives = 162/358 (45%), Gaps = 21/358 (5%)
Query: 97 MDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRR 156
+ F +LI K G+ A + M K P++ + +L++AY + G A A+F
Sbjct: 288 VTFGILIDGLCKFGEMKAARNLFVNMIKFSVTPNIAVYNSLIDAYCKVGDVSEAMALFLE 347
Query: 157 MQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKK 216
++ P TY I+++ ++ +EA +F + K + + ++ +I K
Sbjct: 348 LERFEVSPDVFTYSILIRGLCSVSRTEEAGNIFEKM---TKEGILANSVTYNSLIDGCCK 404
Query: 217 AGGYEKARKLFALMAERGVQQSTVTYNSLMSFET---NYKEVSKIYDQMQRAGLQPDVVS 273
G +KA ++ + M E GV+ + +T+++L+ N + IY +M L PDVV+
Sbjct: 405 EGKMDKALEICSQMTENGVEPNVITFSTLIDGYCKIRNLQAAMGIYSEMVIKSLSPDVVT 464
Query: 274 YALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKC-- 331
Y +I+ + K +EAL ++ +MLD G+ P + LLD G + A +F
Sbjct: 465 YTAMIDGHCKYGSMKEALKLYSDMLDNGITPNCYTISCLLDGLCKDGKISDALELFTEKI 524
Query: 332 -MRRDRCSPDI----------CSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYG 380
+ RC+ D +YT ++ A K F +++ G P+ + Y
Sbjct: 525 EFQTPRCNVDAGGSKPSLTNHVAYTALIHGLCQDGQFSKAVKLFSDMRRYGLQPDEVIYV 584
Query: 381 TLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEME 438
+++G +V + +M ++ M G+ PN + + + Y ++ SA K++E
Sbjct: 585 VMLRGLFQVKYI--LMMLHADMLKFGVIPNSAVHVILCECYQESGFLKSAQNCSKDLE 640
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 60/237 (25%), Positives = 114/237 (48%), Gaps = 4/237 (1%)
Query: 257 KIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAF 316
+IY++M GL P V+++ LI+ + A +F+EM G+ PT Y IL+
Sbjct: 168 RIYEEMISNGLSPSVITFGTLIDGCCRQGDLLRAQEMFDEMRVKGIVPTVIVYTILIRGL 227
Query: 317 AISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNV 376
+++A ++ + MR P++ +Y T++ Y ++ + A + ++ + +G VP+V
Sbjct: 228 CSDNKIEEAESMHRAMREVGVYPNVYTYNTLMDGYCKLANAKQALRLYQDMLGEGLVPDV 287
Query: 377 ITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKE 436
+T+G LI G K ++ ++ M + PN ++ +++DAY K D A+ + E
Sbjct: 288 VTFGILIDGLCKFGEMKAARNLFVNMIKFSVTPNIAVYNSLIDAYCKVGDVSEAMALFLE 347
Query: 437 MESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGINGLSISVDEEDD 493
+E PD +IL+ + EA GN + GI S++ + D
Sbjct: 348 LERFEVSPDVFTYSILIRGLCSVSRTEEA----GNIFEKMTKEGILANSVTYNSLID 400
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/252 (22%), Positives = 109/252 (43%), Gaps = 21/252 (8%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + + LI K+G +KA ++ S M + G P+V++ + L++ Y + + A I+
Sbjct: 391 NSVTYNSLIDGCCKEGKMDKALEICSQMTENGVEPNVITFSTLIDGYCKIRNLQAAMGIY 450
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
M P +TY ++ + KEA +++ +LD + + P+ ++
Sbjct: 451 SEMVIKSLSPDVVTYTAMIDGHCKYGSMKEALKLYSDMLD---NGITPNCYTISCLLDGL 507
Query: 215 KKAGGYEKARKLFALMAERGVQQST-------------VTYNSL---MSFETNYKEVSKI 258
K G A +LF E + V Y +L + + + + K+
Sbjct: 508 CKDGKISDALELFTEKIEFQTPRCNVDAGGSKPSLTNHVAYTALIHGLCQDGQFSKAVKL 567
Query: 259 YDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAI 318
+ M+R GLQPD V Y +++ G + + + + +ML GV P + IL + +
Sbjct: 568 FSDMRRYGLQPDEVIYVVMLR--GLFQVKYILMMLHADMLKFGVIPNSAVHVILCECYQE 625
Query: 319 SGMVDQARTVFK 330
SG + A+ K
Sbjct: 626 SGFLKSAQNCSK 637
>gi|242054609|ref|XP_002456450.1| hypothetical protein SORBIDRAFT_03g036550 [Sorghum bicolor]
gi|241928425|gb|EES01570.1| hypothetical protein SORBIDRAFT_03g036550 [Sorghum bicolor]
Length = 669
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 96/413 (23%), Positives = 185/413 (44%), Gaps = 44/413 (10%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + + +L+ A + F +A VL M KG P++V++ ++ R GR +A +
Sbjct: 177 NVVTYTVLLEAMCRNSGFEQAMAVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDARELL 236
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
R+ S G +P ++Y +LK + ++ + EE+F ++++ P++ F M+I +
Sbjct: 237 NRLPSYGFQPDTVSYTTLLKGLCASKRWDDVEELFAEMMEKN---CMPNEVTFDMLIRFF 293
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVS---KIYDQMQRAGLQPDV 271
+ G E+A ++ M E G +T N +++ V K+ + M G PD
Sbjct: 294 CRGGMVERAIQVLEQMTEHGCATNTTLCNIVINSICKQGRVDDAFKLLNDMGSYGCNPDT 353
Query: 272 VSYALLINAYGKARR-----------------------------------EEEALAVFEE 296
+SY ++ +A R E+A+ + E+
Sbjct: 354 ISYTTVLKGLCRAERWDDAKELLNEMVRNNCPPNEVTFNTFICILCQKGLIEQAIMLIEQ 413
Query: 297 MLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASD 356
M + G YN L++ F + G +D A +F+ M C P+ +YTT+L+ NA
Sbjct: 414 MSEHGCTVGVVTYNALVNGFCVQGHIDSALELFRSM---PCKPNTITYTTLLTGLCNAER 470
Query: 357 MEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTT 416
++GA + + + PNV+T+ L+ + + LE+ +E+ ++M +G PN + T
Sbjct: 471 LDGAAELVAEMLRGDCPPNVVTFNVLVSFFCQKGFLEEAIELVEQMMEHGCTPNLITYNT 530
Query: 417 IMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELL 469
++D K+ + A+ + S G PD + ++ + D EA +L
Sbjct: 531 LLDGITKDCSSEDALELLHGLVSKGVSPDVITFSSIIGILSKEDRIEEAVQLF 583
Score = 144 bits (364), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 97/412 (23%), Positives = 193/412 (46%), Gaps = 5/412 (1%)
Query: 59 PKDLVLGTLVR-LKQLKKWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEK 117
P + TL++ L K+W+ V E+ + ++ NE+ F MLI + + G +A +
Sbjct: 246 PDTVSYTTLLKGLCASKRWDDVEELFAEMMEKNCMP-NEVTFDMLIRFFCRGGMVERAIQ 304
Query: 118 VLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFV 177
VL M + G A + ++ + + GR +A + M S G P ++Y +LK
Sbjct: 305 VLEQMTEHGCATNTTLCNIVINSICKQGRVDDAFKLLNDMGSYGCNPDTISYTTVLKGLC 364
Query: 178 EANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQ 237
A ++ +A+E+ ++ ++ P++ F+ I + + G E+A L M+E G
Sbjct: 365 RAERWDDAKELLNEMV---RNNCPPNEVTFNTFICILCQKGLIEQAIMLIEQMSEHGCTV 421
Query: 238 STVTYNSLMSFETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEM 297
VTYN+L++ + + + +P+ ++Y L+ A R + A + EM
Sbjct: 422 GVVTYNALVNGFCVQGHIDSALELFRSMPCKPNTITYTTLLTGLCNAERLDGAAELVAEM 481
Query: 298 LDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDM 357
L P +N+L+ F G +++A + + M C+P++ +Y T+L
Sbjct: 482 LRGDCPPNVVTFNVLVSFFCQKGFLEEAIELVEQMMEHGCTPNLITYNTLLDGITKDCSS 541
Query: 358 EGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTI 417
E A + L G P+VIT+ ++I +K + +E+ ++++ ++ G++P ++ I
Sbjct: 542 EDALELLHGLVSKGVSPDVITFSSIIGILSKEDRIEEAVQLFHVVQDIGMRPKAVVYNKI 601
Query: 418 MDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELL 469
+ K + D+A+ ++ M S G P++ IL+ EA +LL
Sbjct: 602 LLGLCKRCEIDNAIDFFAYMVSNGCMPNESTYIILIEGLAHEGLLKEAQDLL 653
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 91/363 (25%), Positives = 152/363 (41%), Gaps = 47/363 (12%)
Query: 126 GYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEA 185
G AP V T L+ R GR +A + R + SG
Sbjct: 71 GEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAEGSG------------------------ 106
Query: 186 EEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSL 245
SP+ D ++ ++ Y + G + AR+L M V TY L
Sbjct: 107 ------------SPV--DVFAYNTLVAGYCRYGHLDAARRLIGSMP---VAPDAYTYTPL 149
Query: 246 MSFETNYKEVS---KIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGV 302
+ + V+ + D M R G QP+VV+Y +L+ A + E+A+AV +EM G
Sbjct: 150 IRVLCDRGRVADALSLLDDMLRRGCQPNVVTYTVLLEAMCRNSGFEQAMAVLDEMRAKGC 209
Query: 303 RPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEK 362
P YN++++ G VD AR + + PD SYTT+L + + E+
Sbjct: 210 TPNIVTYNVIINGMCREGRVDDARELLNRLPSYGFQPDTVSYTTLLKGLCASKRWDDVEE 269
Query: 363 FFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYG 422
F + + +PN +T+ LI+ + + +E+ +++ ++M +G N T+ ++++
Sbjct: 270 LFAEMMEKNCMPNEVTFDMLIRFFCRGGMVERAIQVLEQMTEHGCATNTTLCNIVINSIC 329
Query: 423 KNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNF---NHPNNEP 479
K D A +M S G PD + +L A+ ++A ELL N P NE
Sbjct: 330 KQGRVDDAFKLLNDMGSYGCNPDTISYTTVLKGLCRAERWDDAKELLNEMVRNNCPPNEV 389
Query: 480 GIN 482
N
Sbjct: 390 TFN 392
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 81/345 (23%), Positives = 159/345 (46%), Gaps = 21/345 (6%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
LI ++G + A +VL G V ++ L+ Y R G A RR+ S
Sbjct: 82 LIRNLCRRGRTSDAARVLRAAEGSGSPVDVFAYNTLVAGYCRYGHLDAA----RRLIGSM 137
Query: 162 P-RPSALTYQIILKLFVEANKFKEAEEVFMTLLDEE-KSPLKPDQKMFHMMIYMYKKAGG 219
P P A TY ++++ + + +A ++LLD+ + +P+ + +++ + G
Sbjct: 138 PVAPDAYTYTPLIRVLCDRGRVADA----LSLLDDMLRRGCQPNVVTYTVLLEAMCRNSG 193
Query: 220 YEKARKLFALMAERGVQQSTVTYNSL---MSFETNYKEVSKIYDQMQRAGLQPDVVSYAL 276
+E+A + M +G + VTYN + M E + ++ +++ G QPD VSY
Sbjct: 194 FEQAMAVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDARELLNRLPSYGFQPDTVSYTT 253
Query: 277 LINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDR 336
L+ ++R ++ +F EM++ P +++L+ F GMV++A V + M
Sbjct: 254 LLKGLCASKRWDDVEELFAEMMEKNCMPNEVTFDMLIRFFCRGGMVERAIQVLEQMTEHG 313
Query: 337 CSPDICSYTTMLSAYVNASDMEG----AEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNL 392
C+ + TT+ + +N+ +G A K + G P+ I+Y T++KG +
Sbjct: 314 CATN----TTLCNIVINSICKQGRVDDAFKLLNDMGSYGCNPDTISYTTVLKGLCRAERW 369
Query: 393 EKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEM 437
+ E+ ++M N PN+ F T + + + A++ ++M
Sbjct: 370 DDAKELLNEMVRNNCPPNEVTFNTFICILCQKGLIEQAIMLIEQM 414
Score = 105 bits (263), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 70/307 (22%), Positives = 144/307 (46%), Gaps = 10/307 (3%)
Query: 70 LKQLKKWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAP 129
L + ++W+ E+L + +++ NE+ F I ++G +A ++ M++ G
Sbjct: 363 LCRAERWDDAKELLNEM-VRNNCPPNEVTFNTFICILCQKGLIEQAIMLIEQMSEHGCTV 421
Query: 130 SVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVF 189
VV++ AL+ + G +A +FR M +P+ +TY +L A + A E+
Sbjct: 422 GVVTYNALVNGFCVQGHIDSALELFRSMPC---KPNTITYTTLLTGLCNAERLDGAAELV 478
Query: 190 MTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLM--- 246
+L + P+ F++++ + + G E+A +L M E G + +TYN+L+
Sbjct: 479 AEML---RGDCPPNVVTFNVLVSFFCQKGFLEEAIELVEQMMEHGCTPNLITYNTLLDGI 535
Query: 247 SFETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTH 306
+ + + ++ ++ + G+ PDV++++ +I K R EEA+ +F + D G+RP
Sbjct: 536 TKDCSSEDALELLHGLVSKGVSPDVITFSSIIGILSKEDRIEEAVQLFHVVQDIGMRPKA 595
Query: 307 KAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRR 366
YN +L +D A F M + C P+ +Y ++ + ++ A+
Sbjct: 596 VVYNKILLGLCKRCEIDNAIDFFAYMVSNGCMPNESTYIILIEGLAHEGLLKEAQDLLSV 655
Query: 367 LKQDGFV 373
L G +
Sbjct: 656 LCSRGVL 662
>gi|15221671|ref|NP_176495.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169919|sp|Q9CAN6.1|PPR97_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g63070, mitochondrial; Flags: Precursor
gi|12323265|gb|AAG51617.1|AC010795_21 unknown protein; 38394-36551 [Arabidopsis thaliana]
gi|332195929|gb|AEE34050.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 590
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 97/348 (27%), Positives = 174/348 (50%), Gaps = 7/348 (2%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
+I K+G+ + A +L+ M K VV + +++ + +A +F +M++ G
Sbjct: 221 VINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKG 280
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
+P TY ++ ++ +A + +L++ + PD F+ +I + K G
Sbjct: 281 IKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKN---INPDLVFFNALIDAFVKEGKLV 337
Query: 222 KARKLF-ALMAERGVQQSTVTYNSLMSFETNYKEVSK---IYDQMQRAGLQPDVVSYALL 277
+A KL+ ++ + V YN+L+ YK V + ++ +M + GL + V+Y L
Sbjct: 338 EAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTL 397
Query: 278 INAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRC 337
I+ + +AR + A VF++M+ GV P YNILLD +G V+ A VF+ M++
Sbjct: 398 IHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDM 457
Query: 338 SPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMME 397
DI +YTTM+ A A +E F L G PNV+TY T++ G+ + E+
Sbjct: 458 KLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADA 517
Query: 398 IYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPD 445
++ +M+ +G PN + T++ A ++ D ++ KEM SCGF D
Sbjct: 518 LFVEMKEDGPLPNSGTYNTLIRARLRDGDEAASAELIKEMRSCGFAGD 565
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 101/438 (23%), Positives = 208/438 (47%), Gaps = 13/438 (2%)
Query: 6 PRKFMQKRRKVEVFKDAADEAGKKNWRRLMNQIEEVGSAVAVLRSERTRGQPLPKDLVLG 65
PR + R F A+ + ++N R + Q ++ A+ L + + +P P +
Sbjct: 24 PRTTLCWERS---FAGASSDDCRENLSRKVLQDLKLDDAIG-LFGDMVKSRPFPSIVEFS 79
Query: 66 TLVR-LKQLKKWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNK 124
L+ + ++ K+++V + E ++ N + + I + ++ + A +L M K
Sbjct: 80 KLLSAIAKMNKFDLVISLGEQMQ-NLGISHNLYTYSIFINYFCRRSQLSLALAILGKMMK 138
Query: 125 KGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKE 184
GY PS+V+ +L+ + G R A A+ +M G +P +T+ ++ + NK E
Sbjct: 139 LGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASE 198
Query: 185 AEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNS 244
A + ++ + +PD + +I K G + A L M + ++ V YN+
Sbjct: 199 AVALVERMVVK---GCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNT 255
Query: 245 LMSFETNYKEVSKIYD---QMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAG 301
++ YK + +D +M+ G++PDV +Y LI+ R +A + +ML+
Sbjct: 256 IIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKN 315
Query: 302 VRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDR-CSPDICSYTTMLSAYVNASDMEGA 360
+ P +N L+DAF G + +A ++ M + + C PD+ +Y T++ + +E
Sbjct: 316 INPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEG 375
Query: 361 EKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDA 420
+ FR + Q G V N +TY TLI G+ + + + ++ +M +G+ P+ + ++D
Sbjct: 376 MEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDG 435
Query: 421 YGKNKDFDSAVVWYKEME 438
N + ++A+V ++ M+
Sbjct: 436 LCNNGNVETALVVFEYMQ 453
Score = 99.4 bits (246), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 76/311 (24%), Positives = 129/311 (41%), Gaps = 11/311 (3%)
Query: 149 NAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFH 208
+A +F M S P PS + + +L + NKF + L E+ L ++
Sbjct: 58 DAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFD-----LVISLGEQMQNLGISHNLYT 112
Query: 209 MMIYM--YKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSK---IYDQMQ 263
I++ + + A + M + G S VT NSL++ + +S+ + DQM
Sbjct: 113 YSIFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMV 172
Query: 264 RAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVD 323
G QPD V++ L++ + + EA+A+ E M+ G +P Y +++ G D
Sbjct: 173 EMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPD 232
Query: 324 QARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLI 383
A + M + + D+ Y T++ M+ A F +++ G P+V TY LI
Sbjct: 233 LALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLI 292
Query: 384 KGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEM-ESCGF 442
+ M I P+ F ++DA+ K A Y EM +S
Sbjct: 293 SCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHC 352
Query: 443 PPDQKAKNILL 453
PD A N L+
Sbjct: 353 FPDVVAYNTLI 363
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 66/260 (25%), Positives = 116/260 (44%), Gaps = 3/260 (1%)
Query: 223 ARKLFALMAERGVQQSTVTYNSLMSF---ETNYKEVSKIYDQMQRAGLQPDVVSYALLIN 279
A LF M + S V ++ L+S + V + +QMQ G+ ++ +Y++ IN
Sbjct: 59 AIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSIFIN 118
Query: 280 AYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSP 339
+ + + ALA+ +M+ G P+ N LL+ F + +A + M P
Sbjct: 119 YFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQP 178
Query: 340 DICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIY 399
D ++TT++ + A R+ G P+++TYG +I G K + + +
Sbjct: 179 DTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLL 238
Query: 400 DKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTA 459
+KM I+ + I+ TI+D K K D A + +ME+ G PD N L+S
Sbjct: 239 NKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNY 298
Query: 460 DERNEANELLGNFNHPNNEP 479
++A+ LL + N P
Sbjct: 299 GRWSDASRLLSDMLEKNINP 318
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 33/158 (20%), Positives = 77/158 (48%)
Query: 288 EEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTM 347
++A+ +F +M+ + P+ ++ LL A A D ++ + M+ S ++ +Y+
Sbjct: 57 DDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSIF 116
Query: 348 LSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGI 407
++ + S + A ++ + G+ P+++T +L+ G+ N + + + + D+M G
Sbjct: 117 INYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGY 176
Query: 408 KPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPD 445
+P+ FTT++ ++ AV + M G PD
Sbjct: 177 QPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPD 214
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 41/76 (53%)
Query: 99 FLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQ 158
+ +I A K G + ++ KG P+VV++T +M + R G + A+A+F M+
Sbjct: 464 YTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMK 523
Query: 159 SSGPRPSALTYQIILK 174
GP P++ TY +++
Sbjct: 524 EDGPLPNSGTYNTLIR 539
Score = 47.4 bits (111), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 31/146 (21%), Positives = 67/146 (45%), Gaps = 3/146 (2%)
Query: 97 MDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRR 156
M + +L+ G+ A V +M K+ +V++T ++EA + G+ ++ +F
Sbjct: 427 MTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCS 486
Query: 157 MQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKK 216
+ G +P+ +TY ++ F +EA+ +F+ + +E PL P+ ++ +I +
Sbjct: 487 LSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEM--KEDGPL-PNSGTYNTLIRARLR 543
Query: 217 AGGYEKARKLFALMAERGVQQSTVTY 242
G + +L M G T+
Sbjct: 544 DGDEAASAELIKEMRSCGFAGDASTF 569
Score = 44.7 bits (104), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 31/146 (21%), Positives = 59/146 (40%), Gaps = 3/146 (2%)
Query: 322 VDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGT 381
+D A +F M + R P I ++ +LSA + + +++ G N+ TY
Sbjct: 56 LDDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSI 115
Query: 382 LIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCG 441
I + + + L + I KM G P+ ++++ + AV +M G
Sbjct: 116 FINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMG 175
Query: 442 FPPDQKAKNILLSLAKTADERNEANE 467
+ PD +L + N+A+E
Sbjct: 176 YQPDTVT---FTTLVHGLFQHNKASE 198
>gi|224130786|ref|XP_002328376.1| predicted protein [Populus trichocarpa]
gi|222838091|gb|EEE76456.1| predicted protein [Populus trichocarpa]
Length = 599
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 105/392 (26%), Positives = 172/392 (43%), Gaps = 41/392 (10%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
+I K G+ + A ++L M +KG P++V++T ++++ + +A + M G
Sbjct: 203 VINGLCKSGNTSMALQLLRKMEEKGCKPNLVAYTTIIDSLCKDTLVNDAMDLLSEMVDRG 262
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
P +TY IL F EA +F ++ + P+ F +++ K G
Sbjct: 263 IPPDVVTYSTILHGFCSLGHLNEATILFNEMVGRN---VMPNTVTFTILVDGLCKEGMVS 319
Query: 222 KARKLFALMAERGVQQSTVTYNSLM---SFETNYKEVSKIYDQMQRAGLQPDVVSYALLI 278
+AR +F M ++G + + TYN+LM E K+ D M G P V SY +LI
Sbjct: 320 EARCVFEAMTKKGAEPNAYTYNALMDGYCLNNQMDEAQKVLDIMVDKGCAPVVHSYNILI 379
Query: 279 NAYGKAR-----------------------------------REEEALAVFEEMLDAGVR 303
N Y K R R +EAL +F+EM +G+
Sbjct: 380 NGYCKRRRLDEAKSLLVEMSEKELTPDTVTYSTLMQGLCQVGRPQEALNLFKEMCSSGLL 439
Query: 304 PTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKF 363
P Y+ LLD G +D+A + K M+ + PDI Y ++ A +E A++
Sbjct: 440 PDLMTYSTLLDGLCKHGHLDEALKLLKSMQESKIEPDIVLYNILIEGMFIAGKLEVAKEL 499
Query: 364 FRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGK 423
F +L DG P + TY +IKG K ++ E++ KM +G PN + I+ + +
Sbjct: 500 FSKLFADGIQPTIRTYTIMIKGLLKEGLSDEAYELFRKMEDDGFLPNSCSYNVIIQGFLQ 559
Query: 424 NKDFDSAVVWYKEMESCGFPPDQKAKNILLSL 455
N+D +A+ EM F D +LL L
Sbjct: 560 NQDSSTAIRLIDEMVGKRFSADSSTFQMLLDL 591
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 92/391 (23%), Positives = 175/391 (44%), Gaps = 6/391 (1%)
Query: 101 MLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSS 160
+LI + A VL M K G P ++ L+ G K A +F M
Sbjct: 132 ILINCLCRLNHVVFAISVLGKMFKLGIQPDAITFNTLINGRCIEGEIKEAVGLFNEMVRR 191
Query: 161 GPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGY 220
G +P ++Y ++ ++ A ++ + EEK KP+ + +I K
Sbjct: 192 GHQPDVISYSTVINGLCKSGNTSMALQLLRKM--EEKG-CKPNLVAYTTIIDSLCKDTLV 248
Query: 221 EKARKLFALMAERGVQQSTVTYNSLM-SFET--NYKEVSKIYDQMQRAGLQPDVVSYALL 277
A L + M +RG+ VTY++++ F + + E + ++++M + P+ V++ +L
Sbjct: 249 NDAMDLLSEMVDRGIPPDVVTYSTILHGFCSLGHLNEATILFNEMVGRNVMPNTVTFTIL 308
Query: 278 INAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRC 337
++ K EA VFE M G P YN L+D + ++ +D+A+ V M C
Sbjct: 309 VDGLCKEGMVSEARCVFEAMTKKGAEPNAYTYNALMDGYCLNNQMDEAQKVLDIMVDKGC 368
Query: 338 SPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMME 397
+P + SY +++ Y ++ A+ + + P+ +TY TL++G +V ++ +
Sbjct: 369 APVVHSYNILINGYCKRRRLDEAKSLLVEMSEKELTPDTVTYSTLMQGLCQVGRPQEALN 428
Query: 398 IYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAK 457
++ +M +G+ P+ ++T++D K+ D A+ K M+ PD NIL+
Sbjct: 429 LFKEMCSSGLLPDLMTYSTLLDGLCKHGHLDEALKLLKSMQESKIEPDIVLYNILIEGMF 488
Query: 458 TADERNEANELLGNFNHPNNEPGINGLSISV 488
A + A EL +P I +I +
Sbjct: 489 IAGKLEVAKELFSKLFADGIQPTIRTYTIMI 519
Score = 135 bits (340), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 85/395 (21%), Positives = 178/395 (45%), Gaps = 41/395 (10%)
Query: 97 MDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRR 156
+ F LI +G+ +A + + M ++G+ P V+S++ ++ + G A + R+
Sbjct: 163 ITFNTLINGRCIEGEIKEAVGLFNEMVRRGHQPDVISYSTVINGLCKSGNTSMALQLLRK 222
Query: 157 MQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKK 216
M+ G +P+ + Y I+ + +A ++ ++D + PD + +++ +
Sbjct: 223 MEEKGCKPNLVAYTTIIDSLCKDTLVNDAMDLLSEMVDRG---IPPDVVTYSTILHGFCS 279
Query: 217 AGGYEKARKLFALMAERGVQQSTVTYNSL---MSFETNYKEVSKIYDQMQRAGLQPDVVS 273
G +A LF M R V +TVT+ L + E E +++ M + G +P+ +
Sbjct: 280 LGHLNEATILFNEMVGRNVMPNTVTFTILVDGLCKEGMVSEARCVFEAMTKKGAEPNAYT 339
Query: 274 YALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMR 333
Y L++ Y + +EA V + M+D G P +YNIL++ + +D+A+++ M
Sbjct: 340 YNALMDGYCLNNQMDEAQKVLDIMVDKGCAPVVHSYNILINGYCKRRRLDEAKSLLVEMS 399
Query: 334 RDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLE 393
+PD +Y+T++ + A F+ + G +P+++TY TL+ G K +L+
Sbjct: 400 EKELTPDTVTYSTLMQGLCQVGRPQEALNLFKEMCSSGLLPDLMTYSTLLDGLCKHGHLD 459
Query: 394 KMM-----------------------------------EIYDKMRVNGIKPNQTIFTTIM 418
+ + E++ K+ +GI+P +T ++
Sbjct: 460 EALKLLKSMQESKIEPDIVLYNILIEGMFIAGKLEVAKELFSKLFADGIQPTIRTYTIMI 519
Query: 419 DAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILL 453
K D A +++ME GF P+ + N+++
Sbjct: 520 KGLLKEGLSDEAYELFRKMEDDGFLPNSCSYNVII 554
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 93/388 (23%), Positives = 171/388 (44%), Gaps = 6/388 (1%)
Query: 97 MDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRR 156
++F + + K+ ++ + + M+ G +V S L+ R A ++ +
Sbjct: 93 VEFGRFLGSIAKKKQYSTVVSLCNQMDLFGVTHNVYSLNILINCLCRLNHVVFAISVLGK 152
Query: 157 MQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKK 216
M G +P A+T+ ++ + KEA +F ++ +PD + +I K
Sbjct: 153 MFKLGIQPDAITFNTLINGRCIEGEIKEAVGLFNEMVRRGH---QPDVISYSTVINGLCK 209
Query: 217 AGGYEKARKLFALMAERGVQQSTVTYNSL---MSFETNYKEVSKIYDQMQRAGLQPDVVS 273
+G A +L M E+G + + V Y ++ + +T + + +M G+ PDVV+
Sbjct: 210 SGNTSMALQLLRKMEEKGCKPNLVAYTTIIDSLCKDTLVNDAMDLLSEMVDRGIPPDVVT 269
Query: 274 YALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMR 333
Y+ +++ + EA +F EM+ V P + IL+D GMV +AR VF+ M
Sbjct: 270 YSTILHGFCSLGHLNEATILFNEMVGRNVMPNTVTFTILVDGLCKEGMVSEARCVFEAMT 329
Query: 334 RDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLE 393
+ P+ +Y ++ Y + M+ A+K + G P V +Y LI GY K L+
Sbjct: 330 KKGAEPNAYTYNALMDGYCLNNQMDEAQKVLDIMVDKGCAPVVHSYNILINGYCKRRRLD 389
Query: 394 KMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILL 453
+ + +M + P+ ++T+M + A+ +KEM S G PD + LL
Sbjct: 390 EAKSLLVEMSEKELTPDTVTYSTLMQGLCQVGRPQEALNLFKEMCSSGLLPDLMTYSTLL 449
Query: 454 SLAKTADERNEANELLGNFNHPNNEPGI 481
+EA +LL + EP I
Sbjct: 450 DGLCKHGHLDEALKLLKSMQESKIEPDI 477
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 60/273 (21%), Positives = 121/273 (44%), Gaps = 3/273 (1%)
Query: 220 YEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVS---KIYDQMQRAGLQPDVVSYAL 276
Y L M GV + + N L++ V + +M + G+QPD +++
Sbjct: 108 YSTVVSLCNQMDLFGVTHNVYSLNILINCLCRLNHVVFAISVLGKMFKLGIQPDAITFNT 167
Query: 277 LINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDR 336
LIN +EA+ +F EM+ G +P +Y+ +++ SG A + + M
Sbjct: 168 LINGRCIEGEIKEAVGLFNEMVRRGHQPDVISYSTVINGLCKSGNTSMALQLLRKMEEKG 227
Query: 337 CSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMM 396
C P++ +YTT++ + + + A + G P+V+TY T++ G+ + +L +
Sbjct: 228 CKPNLVAYTTIIDSLCKDTLVNDAMDLLSEMVDRGIPPDVVTYSTILHGFCSLGHLNEAT 287
Query: 397 EIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLA 456
++++M + PN FT ++D K A ++ M G P+ N L+
Sbjct: 288 ILFNEMVGRNVMPNTVTFTILVDGLCKEGMVSEARCVFEAMTKKGAEPNAYTYNALMDGY 347
Query: 457 KTADERNEANELLGNFNHPNNEPGINGLSISVD 489
++ +EA ++L P ++ +I ++
Sbjct: 348 CLNNQMDEAQKVLDIMVDKGCAPVVHSYNILIN 380
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/233 (26%), Positives = 104/233 (44%), Gaps = 4/233 (1%)
Query: 259 YDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAY--NILLDAF 316
+ +M R +P VV + + + K ++ +++ +M GV TH Y NIL++
Sbjct: 80 FYRMLRMNPRPSVVEFGRFLGSIAKKKQYSTVVSLCNQMDLFGV--THNVYSLNILINCL 137
Query: 317 AISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNV 376
V A +V M + PD ++ T+++ +++ A F + + G P+V
Sbjct: 138 CRLNHVVFAISVLGKMFKLGIQPDAITFNTLINGRCIEGEIKEAVGLFNEMVRRGHQPDV 197
Query: 377 ITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKE 436
I+Y T+I G K N +++ KM G KPN +TTI+D+ K+ + A+ E
Sbjct: 198 ISYSTVINGLCKSGNTSMALQLLRKMEEKGCKPNLVAYTTIIDSLCKDTLVNDAMDLLSE 257
Query: 437 MESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGINGLSISVD 489
M G PPD + +L + NEA L N P +I VD
Sbjct: 258 MVDRGIPPDVVTYSTILHGFCSLGHLNEATILFNEMVGRNVMPNTVTFTILVD 310
Score = 39.7 bits (91), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 33/173 (19%), Positives = 65/173 (37%)
Query: 322 VDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGT 381
+D A F M R P + + L + ++ G NV +
Sbjct: 73 IDDALASFYRMLRMNPRPSVVEFGRFLGSIAKKKQYSTVVSLCNQMDLFGVTHNVYSLNI 132
Query: 382 LIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCG 441
LI ++N++ + + KM GI+P+ F T+++ + AV + EM G
Sbjct: 133 LINCLCRLNHVVFAISVLGKMFKLGIQPDAITFNTLINGRCIEGEIKEAVGLFNEMVRRG 192
Query: 442 FPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGINGLSISVDEEDDD 494
PD + + +++ + + A +LL +P + + +D D
Sbjct: 193 HQPDVISYSTVINGLCKSGNTSMALQLLRKMEEKGCKPNLVAYTTIIDSLCKD 245
>gi|334182313|ref|NP_172058.2| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
gi|334182315|ref|NP_001154307.2| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
gi|122236365|sp|Q0WVK7.1|PPR12_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g05670, mitochondrial; Flags: Precursor
gi|110741796|dbj|BAE98841.1| hypothetical protein [Arabidopsis thaliana]
gi|332189752|gb|AEE27873.1| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
gi|332189753|gb|AEE27874.1| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
Length = 741
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 101/393 (25%), Positives = 171/393 (43%), Gaps = 41/393 (10%)
Query: 94 FNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAI 153
+N + ++I + G +A +L M KGY P V+S++ ++ Y R G +
Sbjct: 244 WNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKL 303
Query: 154 FRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYM 213
M+ G +P++ Y I+ L K EAEE F ++ + + PD ++ +I
Sbjct: 304 IEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMI---RQGILPDTVVYTTLIDG 360
Query: 214 YKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFET---NYKEVSKIYDQMQRAGLQPD 270
+ K G A K F M R + +TY +++S + E K++ +M GL+PD
Sbjct: 361 FCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPD 420
Query: 271 VVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFK 330
V++ LIN Y KA ++A V M+ AG P Y L+D G +D A +
Sbjct: 421 SVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLH 480
Query: 331 CMRRDRCSPDI----------C-------------------------SYTTMLSAYVNAS 355
M + P+I C +YTT++ AY +
Sbjct: 481 EMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSG 540
Query: 356 DMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFT 415
+M+ A++ + + G P ++T+ L+ G+ LE ++ + M GI PN T F
Sbjct: 541 EMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFN 600
Query: 416 TIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKA 448
+++ Y + +A YK+M S G PD K
Sbjct: 601 SLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKT 633
Score = 148 bits (374), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 91/343 (26%), Positives = 163/343 (47%), Gaps = 6/343 (1%)
Query: 114 KAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIIL 173
+AE+ S M ++G P V +T L++ + + G + A F M S P LTY I+
Sbjct: 334 EAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAII 393
Query: 174 KLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAER 233
F + EA ++F + + L+PD F +I Y KAG + A ++ M +
Sbjct: 394 SGFCQIGDMVEAGKLFHEMFCK---GLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQA 450
Query: 234 GVQQSTVTYNSL---MSFETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEA 290
G + VTY +L + E + +++ +M + GLQP++ +Y ++N K+ EEA
Sbjct: 451 GCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEA 510
Query: 291 LAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSA 350
+ + E AG+ Y L+DA+ SG +D+A+ + K M P I ++ +++
Sbjct: 511 VKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNG 570
Query: 351 YVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPN 410
+ +E EK + G PN T+ +L+K Y NNL+ IY M G+ P+
Sbjct: 571 FCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPD 630
Query: 411 QTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILL 453
+ ++ + K ++ A ++EM+ GF ++L+
Sbjct: 631 GKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLI 673
Score = 142 bits (357), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 83/352 (23%), Positives = 175/352 (49%), Gaps = 6/352 (1%)
Query: 99 FLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQ 158
+ LI + K+GD A K M+ + P V+++TA++ + + G A +F M
Sbjct: 354 YTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMF 413
Query: 159 SSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAG 218
G P ++T+ ++ + +A K+A V ++ ++ P+ + +I K G
Sbjct: 414 CKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMI---QAGCSPNVVTYTTLIDGLCKEG 470
Query: 219 GYEKARKLFALMAERGVQQSTVTYNSL---MSFETNYKEVSKIYDQMQRAGLQPDVVSYA 275
+ A +L M + G+Q + TYNS+ + N +E K+ + + AGL D V+Y
Sbjct: 471 DLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYT 530
Query: 276 LLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRD 335
L++AY K+ ++A + +EML G++PT +N+L++ F + GM++ + M
Sbjct: 531 TLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAK 590
Query: 336 RCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKM 395
+P+ ++ +++ Y ++++ A ++ + G P+ TY L+KG+ K N+++
Sbjct: 591 GIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEA 650
Query: 396 MEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQK 447
++ +M+ G + + ++ ++ + K K F A + +M G D++
Sbjct: 651 WFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKE 702
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 95/382 (24%), Positives = 164/382 (42%), Gaps = 9/382 (2%)
Query: 110 GDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAI--FRRMQSSGPRPSAL 167
G +A +V M G SV S + + YK A AI FR G +
Sbjct: 189 GLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDC-YKTATAIIVFREFPEVGVCWNVA 247
Query: 168 TYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLF 227
+Y I++ + + KEA + + + E PD + ++ Y + G +K KL
Sbjct: 248 SYNIVIHFVCQLGRIKEAHHLLLLM---ELKGYTPDVISYSTVVNGYCRFGELDKVWKLI 304
Query: 228 ALMAERGVQQSTVTYNSLMSFET---NYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKA 284
+M +G++ ++ Y S++ E + + +M R G+ PD V Y LI+ + K
Sbjct: 305 EVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKR 364
Query: 285 RREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSY 344
A F EM + P Y ++ F G + +A +F M PD ++
Sbjct: 365 GDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTF 424
Query: 345 TTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRV 404
T +++ Y A M+ A + + Q G PNV+TY TLI G K +L+ E+ +M
Sbjct: 425 TELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWK 484
Query: 405 NGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNE 464
G++PN + +I++ K+ + + AV E E+ G D L+ + E ++
Sbjct: 485 IGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDK 544
Query: 465 ANELLGNFNHPNNEPGINGLSI 486
A E+L +P I ++
Sbjct: 545 AQEILKEMLGKGLQPTIVTFNV 566
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 65/256 (25%), Positives = 123/256 (48%), Gaps = 6/256 (2%)
Query: 88 IQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRY 147
IQ+ N + + LI K+GD + A ++L M K G P++ ++ +++ + G
Sbjct: 448 IQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNI 507
Query: 148 KNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMF 207
+ A + +++G +TY ++ + ++ + +A+E+ +L + L+P F
Sbjct: 508 EEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGK---GLQPTIVTF 564
Query: 208 HMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLM---SFETNYKEVSKIYDQMQR 264
++++ + G E KL M +G+ + T+NSL+ N K + IY M
Sbjct: 565 NVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCS 624
Query: 265 AGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQ 324
G+ PD +Y L+ + KAR +EA +F+EM G + Y++L+ F +
Sbjct: 625 RGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLE 684
Query: 325 ARTVFKCMRRDRCSPD 340
AR VF MRR+ + D
Sbjct: 685 AREVFDQMRREGLAAD 700
Score = 78.6 bits (192), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 100/208 (48%), Gaps = 6/208 (2%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
+ + + L+ AY K G+ +KA+++L M KG P++V+ LM + G ++ E +
Sbjct: 525 DTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLL 584
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
M + G P+A T+ ++K + N K A ++ D + PD K + ++ +
Sbjct: 585 NWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYK---DMCSRGVGPDGKTYENLVKGH 641
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSLMSF---ETNYKEVSKIYDQMQRAGLQPDV 271
KA ++A LF M +G S TY+ L+ + E +++DQM+R GL D
Sbjct: 642 CKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADK 701
Query: 272 VSYALLINAYGKARREEEALAVFEEMLD 299
+ + K +R + + +E+++
Sbjct: 702 EIFDFFSDTKYKGKRPDTIVDPIDEIIE 729
>gi|255557937|ref|XP_002519997.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223540761|gb|EEF42321.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 1429
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 117/427 (27%), Positives = 191/427 (44%), Gaps = 57/427 (13%)
Query: 26 AGKKNWRRLMNQIEEVGSAVAVLRSERTRGQPLPKDLVLGTLVRLKQLKKWNVVSEVLE- 84
G++NW+R A+ V R P +L T+ L L K N + +E
Sbjct: 151 VGQENWQR----------ALEVFEWLNLRHWYSPNARMLATI--LAVLGKANQEALAVEI 198
Query: 85 WLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRG 144
++R +S D + ++ Y + G FNK + +L M ++G P +VS L+ A +
Sbjct: 199 FIRAESTVDNTVQVYNAMMGVYARTGRFNKVQGMLDLMRERGCEPDLVSFNTLINARLKA 258
Query: 145 GRYKNAEAI--FRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKP 202
G AI ++ SG RP +TY ++ + +EA +VF D E +P
Sbjct: 259 GAMTPNVAIELLNEVRRSGLRPDIITYNTLISACSRESNLEEAVKVFD---DMEAHYCQP 315
Query: 203 DQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLM---SFETNYKEVSKI- 258
D ++ MI +Y + G KA +LF + +G VTYNSL+ + E N +V +I
Sbjct: 316 DLWTYNAMISVYGRCGFSGKAEQLFKELESKGYFPDAVTYNSLLYAFAREGNVDKVKEIC 375
Query: 259 ----------------------------------YDQMQRAGLQPDVVSYALLINAYGKA 284
Y M+ +G PD ++Y +LI++ GKA
Sbjct: 376 NEMVQMGFIRDEMTYNTIIHMYGKQGQHGLALQLYRDMKLSGRTPDAITYTVLIDSLGKA 435
Query: 285 RREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSY 344
+ EA V EML+ GV+PT + Y+ L+ +A +G +A F CMRR PD +Y
Sbjct: 436 NKMVEAANVMSEMLNIGVKPTLRTYSALICGYARAGQRLEAEETFDCMRRSGIRPDQLAY 495
Query: 345 TTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKM-R 403
+ ML ++ + A +R + +DG P+ YG +++ + N +E + I M
Sbjct: 496 SVMLDVFLRFDEATKAMMLYREMVRDGITPDPTVYGAMLRNLGRENKVEDIQRIIRDMEE 555
Query: 404 VNGIKPN 410
V G+ P
Sbjct: 556 VCGMNPQ 562
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 95/406 (23%), Positives = 182/406 (44%), Gaps = 11/406 (2%)
Query: 53 TRGQPLPKDLVLGTLVRLKQLKKWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDF 112
++ Q P D +V+ + W EV EWL ++ W+ N ++ GK
Sbjct: 135 SKVQMTPTDFCF--VVKWVGQENWQRALEVFEWLNLRHWYSPNARMLATILAVLGKAN-- 190
Query: 113 NKAEKVLSFMNKKGYAPSVVS-HTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQI 171
+A V F+ + + V + A+M Y R GR+ + + M+ G P +++
Sbjct: 191 QEALAVEIFIRAESTVDNTVQVYNAMMGVYARTGRFNKVQGMLDLMRERGCEPDLVSFNT 250
Query: 172 ILKLFVEANKFKEAEEVFMTLLDE-EKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALM 230
++ ++A V + LL+E +S L+PD ++ +I + E+A K+F M
Sbjct: 251 LINARLKAGAM--TPNVAIELLNEVRRSGLRPDIITYNTLISACSRESNLEEAVKVFDDM 308
Query: 231 AERGVQQSTVTYNSLMSFETNYK---EVSKIYDQMQRAGLQPDVVSYALLINAYGKARRE 287
Q TYN+++S + +++ +++ G PD V+Y L+ A+ +
Sbjct: 309 EAHYCQPDLWTYNAMISVYGRCGFSGKAEQLFKELESKGYFPDAVTYNSLLYAFAREGNV 368
Query: 288 EEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTM 347
++ + EM+ G YN ++ + G A +++ M+ +PD +YT +
Sbjct: 369 DKVKEICNEMVQMGFIRDEMTYNTIIHMYGKQGQHGLALQLYRDMKLSGRTPDAITYTVL 428
Query: 348 LSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGI 407
+ + A+ M A + G P + TY LI GYA+ + E +D MR +GI
Sbjct: 429 IDSLGKANKMVEAANVMSEMLNIGVKPTLRTYSALICGYARAGQRLEAEETFDCMRRSGI 488
Query: 408 KPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILL 453
+P+Q ++ ++D + + + A++ Y+EM G PD +L
Sbjct: 489 RPDQLAYSVMLDVFLRFDEATKAMMLYREMVRDGITPDPTVYGAML 534
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 96/401 (23%), Positives = 180/401 (44%), Gaps = 7/401 (1%)
Query: 72 QLKKWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSV 131
+LK W ++ LR Q + + + LI AY G + +A V + M + G +P+V
Sbjct: 747 KLKLWQKAESLVGNLR-QRCTNVDRKVWNALIQAYAASGCYEQARAVFNTMMRDGPSPTV 805
Query: 132 VSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMT 191
S L++A GR + + + +Q G + S + +IL F + EA++++
Sbjct: 806 DSINGLLQALIVDGRLEELYVVTQEIQDMGFQISKSSILLILDAFARVSNIAEAKKIYQG 865
Query: 192 LLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFET- 250
+ + + P ++ +MI + K + M E G + +NS++ T
Sbjct: 866 M---KAAGYFPTMHLYRIMIGLLCKGKRVRDVEAMVTEMEEAGFRPDLSIWNSMLRLYTG 922
Query: 251 --NYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKA 308
++++ +IY +++ GLQPD +Y LI Y + R EE ++ EM G+ P
Sbjct: 923 IDDFRKTVQIYQRIKEDGLQPDEDTYNTLIVMYCRDHRPEEGCSLMHEMRRIGLEPKLDT 982
Query: 309 YNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLK 368
Y L+ AF +V A +F+ + D Y M+ Y N+ + AEK +K
Sbjct: 983 YKSLIAAFGKQQLVVDAEELFEELLSKGSKLDRSFYHIMMKIYRNSGNHSKAEKLLSMMK 1042
Query: 369 QDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFD 428
G P + T L+ Y ++ ++ ++ G+ + +++++DAY KNKD+
Sbjct: 1043 DAGVEPTIATMHLLMVSYGSSGQPQEAEKVLTNLKEMGLSLSTLPYSSVIDAYLKNKDYS 1102
Query: 429 SAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELL 469
+ EM+ G PD + + A ++ ++A LL
Sbjct: 1103 VGIQKLVEMKKEGLEPDHRIWTCFIRAASLSEHTHDAILLL 1143
Score = 128 bits (321), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 80/331 (24%), Positives = 161/331 (48%), Gaps = 9/331 (2%)
Query: 164 PSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKA 223
P+A IL + +AN+ A E+F+ +S + ++++ M+ +Y + G + K
Sbjct: 174 PNARMLATILAVLGKANQEALAVEIFI----RAESTVDNTVQVYNAMMGVYARTGRFNKV 229
Query: 224 RKLFALMAERGVQQSTVTYNSLMSFETNYKEVS-----KIYDQMQRAGLQPDVVSYALLI 278
+ + LM ERG + V++N+L++ ++ ++ ++++R+GL+PD+++Y LI
Sbjct: 230 QGMLDLMRERGCEPDLVSFNTLINARLKAGAMTPNVAIELLNEVRRSGLRPDIITYNTLI 289
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCS 338
+A + EEA+ VF++M +P YN ++ + G +A +FK +
Sbjct: 290 SACSRESNLEEAVKVFDDMEAHYCQPDLWTYNAMISVYGRCGFSGKAEQLFKELESKGYF 349
Query: 339 PDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEI 398
PD +Y ++L A+ +++ ++ + Q GF+ + +TY T+I Y K +++
Sbjct: 350 PDAVTYNSLLYAFAREGNVDKVKEICNEMVQMGFIRDEMTYNTIIHMYGKQGQHGLALQL 409
Query: 399 YDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKT 458
Y M+++G P+ +T ++D+ GK A EM + G P + + L+
Sbjct: 410 YRDMKLSGRTPDAITYTVLIDSLGKANKMVEAANVMSEMLNIGVKPTLRTYSALICGYAR 469
Query: 459 ADERNEANELLGNFNHPNNEPGINGLSISVD 489
A +R EA E P S+ +D
Sbjct: 470 AGQRLEAEETFDCMRRSGIRPDQLAYSVMLD 500
Score = 108 bits (270), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 95/447 (21%), Positives = 196/447 (43%), Gaps = 18/447 (4%)
Query: 48 LRSERTRGQPLPKDLVLGTLVRLKQL----KKWNVVSEVLEWLRIQSWWDFNEMDFLMLI 103
L+ ++ L + + TL + KQL K++N E W+ + + LI
Sbjct: 619 LKGHVSKSNQLVAEASIVTLCKAKQLDAALKEYNDTREF-------DWFTGSCTMYESLI 671
Query: 104 TAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPR 163
+ +A ++ S M G PS + +++ Y + G + A + + G
Sbjct: 672 QCCEENEFTAEASQIFSDMRFNGVKPSKSLYRSMVLMYCKMGFPETAHYLIDLAEIEGMP 731
Query: 164 PSALTYQI-ILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEK 222
++ + +++ + + +++AE + L + D+K+++ +I Y +G YE+
Sbjct: 732 FDKISIDVAVIETYGKLKLWQKAESLVGNL---RQRCTNVDRKVWNALIQAYAASGCYEQ 788
Query: 223 ARKLFALMAERGVQQSTVTYNSLMS---FETNYKEVSKIYDQMQRAGLQPDVVSYALLIN 279
AR +F M G + + N L+ + +E+ + ++Q G Q S L+++
Sbjct: 789 ARAVFNTMMRDGPSPTVDSINGLLQALIVDGRLEELYVVTQEIQDMGFQISKSSILLILD 848
Query: 280 AYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSP 339
A+ + EA +++ M AG PT Y I++ V + M P
Sbjct: 849 AFARVSNIAEAKKIYQGMKAAGYFPTMHLYRIMIGLLCKGKRVRDVEAMVTEMEEAGFRP 908
Query: 340 DICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIY 399
D+ + +ML Y D + ++R+K+DG P+ TY TLI Y + + E+ +
Sbjct: 909 DLSIWNSMLRLYTGIDDFRKTVQIYQRIKEDGLQPDEDTYNTLIVMYCRDHRPEEGCSLM 968
Query: 400 DKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTA 459
+MR G++P + +++ A+GK + A ++E+ S G D+ +I++ + + +
Sbjct: 969 HEMRRIGLEPKLDTYKSLIAAFGKQQLVVDAEELFEELLSKGSKLDRSFYHIMMKIYRNS 1028
Query: 460 DERNEANELLGNFNHPNNEPGINGLSI 486
++A +LL EP I + +
Sbjct: 1029 GNHSKAEKLLSMMKDAGVEPTIATMHL 1055
>gi|224113307|ref|XP_002316451.1| predicted protein [Populus trichocarpa]
gi|222865491|gb|EEF02622.1| predicted protein [Populus trichocarpa]
Length = 707
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 97/354 (27%), Positives = 172/354 (48%), Gaps = 7/354 (1%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + F +I + + +KAE+ + M KG APSV ++ L++ YGR + I
Sbjct: 311 NCIAFNSVIDKFCEMQMIDKAEEWVKKMVGKGIAPSVETYNILIDGYGRLCVFSRCFQIL 370
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
M+ +G +P+ ++Y ++ + K EAE M L D + P+ +++M+I
Sbjct: 371 EEMEENGEKPNVISYGSLINCLCKDGKILEAE---MVLRDMVGRGVLPNANIYNMLIDGS 427
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETN---YKEVSKIYDQMQRAGLQPDV 271
G +A + F M++ G+ + VTYNSL+ KE +++ + G PDV
Sbjct: 428 CTVGKLREALRFFDEMSKNGIGATIVTYNSLIKGLCKMGKLKEAEEMFFLITSTGHCPDV 487
Query: 272 VSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKC 331
++Y LI+ Y A ++ L ++E M G++PT ++ L+ + G + T+F
Sbjct: 488 ITYNSLISGYSNAGNSQKCLELYETMKKLGLKPTINTFHPLISGCSKEG-IKLKETLFNE 546
Query: 332 MRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNN 391
M + SPD Y M+ Y ++ A + + G P+ TY +LI G+ K
Sbjct: 547 MLQMNLSPDRVVYNAMIHCYQETGHVQKAFSLQKEMVDMGVRPDNKTYNSLILGHLKEGK 606
Query: 392 LEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPD 445
L + ++ D M+ G+ P ++ ++ + KDF+ A VWY+EM GF P+
Sbjct: 607 LSETKDLVDDMKAKGLIPEADTYSLLIQGHCDLKDFNGAYVWYREMLENGFLPN 660
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 83/315 (26%), Positives = 153/315 (48%), Gaps = 5/315 (1%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + + LI K G +AE VL M +G P+ + L++ G+ + A F
Sbjct: 381 NVISYGSLINCLCKDGKILEAEMVLRDMVGRGVLPNANIYNMLIDGSCTVGKLREALRFF 440
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
M +G + +TY ++K + K KEAEE+F + P D ++ +I Y
Sbjct: 441 DEMSKNGIGATIVTYNSLIKGLCKMGKLKEAEEMFFLITSTGHCP---DVITYNSLISGY 497
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSLMS--FETNYKEVSKIYDQMQRAGLQPDVV 272
AG +K +L+ M + G++ + T++ L+S + K ++++M + L PD V
Sbjct: 498 SNAGNSQKCLELYETMKKLGLKPTINTFHPLISGCSKEGIKLKETLFNEMLQMNLSPDRV 557
Query: 273 SYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCM 332
Y +I+ Y + ++A ++ +EM+D GVRP +K YN L+ G + + + + M
Sbjct: 558 VYNAMIHCYQETGHVQKAFSLQKEMVDMGVRPDNKTYNSLILGHLKEGKLSETKDLVDDM 617
Query: 333 RRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNL 392
+ P+ +Y+ ++ + + D GA ++R + ++GF+PNV L G K L
Sbjct: 618 KAKGLIPEADTYSLLIQGHCDLKDFNGAYVWYREMLENGFLPNVCICNELSTGLRKDGRL 677
Query: 393 EKMMEIYDKMRVNGI 407
++ I +M NG+
Sbjct: 678 QEAQSICSEMIANGM 692
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 104/467 (22%), Positives = 184/467 (39%), Gaps = 111/467 (23%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + F LI Y K G+ + A + M K+ PS+++ +L+ + R + A +
Sbjct: 135 NRVTFNTLIDGYCKAGEVDVAIGLRERMKKEKVEPSIITFNSLLSGLCKARRIEEARCML 194
Query: 155 RRMQSSGPRPSALTYQII--------------LKLFVEA--------------------- 179
++ +G P TY II L L+ EA
Sbjct: 195 NEIKCNGFVPDGFTYSIIFDGLLKSDDGAGAALDLYREAIGKGVKIDNYTCSILLNGLCK 254
Query: 180 -NKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQS 238
K ++AEEV +L++ L P + +++ ++ Y + G ++A M RG++ +
Sbjct: 255 EGKVEKAEEVLKSLVEH---GLVPGEVIYNTIVNGYCQIGDMDRAILTIEQMESRGLRPN 311
Query: 239 TVTYNSLM--------------------------SFETN------------YKEVSKIYD 260
+ +NS++ S ET + +I +
Sbjct: 312 CIAFNSVIDKFCEMQMIDKAEEWVKKMVGKGIAPSVETYNILIDGYGRLCVFSRCFQILE 371
Query: 261 QMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISG 320
+M+ G +P+V+SY LIN K + EA V +M+ GV P YN+L+D G
Sbjct: 372 EMEENGEKPNVISYGSLINCLCKDGKILEAEMVLRDMVGRGVLPNANIYNMLIDGSCTVG 431
Query: 321 MVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYG 380
+ +A F M ++ I +Y +++ ++ AE+ F + G P+VITY
Sbjct: 432 KLREALRFFDEMSKNGIGATIVTYNSLIKGLCKMGKLKEAEEMFFLITSTGHCPDVITYN 491
Query: 381 TLIKGYAKVNNLEKMMEIYDKMRVNGIKP------------------------------- 409
+LI GY+ N +K +E+Y+ M+ G+KP
Sbjct: 492 SLISGYSNAGNSQKCLELYETMKKLGLKPTINTFHPLISGCSKEGIKLKETLFNEMLQMN 551
Query: 410 ---NQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILL 453
++ ++ ++ Y + A KEM G PD K N L+
Sbjct: 552 LSPDRVVYNAMIHCYQETGHVQKAFSLQKEMVDMGVRPDNKTYNSLI 598
Score = 125 bits (313), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 87/362 (24%), Positives = 173/362 (47%), Gaps = 17/362 (4%)
Query: 101 MLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSS 160
ML++ + ++ ++ FM ++G PS ++E+ ++ N +F+ M
Sbjct: 1 MLLSVCSESKMHSQVSELYDFMRQEGRLPSFGYVRMIVESLVESKKFDNVLDLFKEMVGL 60
Query: 161 GPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGY 220
G RP L Y + V+ K A E+F T+ ++ + P+ +++++I K
Sbjct: 61 GFRPDKLVYGRAMLAAVKLGDLKLAMELFETM---KRRKVVPNVFVYNVLIGGLCKEKRI 117
Query: 221 EKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVS---KIYDQMQRAGLQPDVVSYALL 277
A KLF M+ R + + VT+N+L+ EV + ++M++ ++P ++++ L
Sbjct: 118 RDAEKLFGEMSVRNLVPNRVTFNTLIDGYCKAGEVDVAIGLRERMKKEKVEPSIITFNSL 177
Query: 278 INAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAIS-----GMVDQAR-TVFKC 331
++ KARR EEA + E+ G P Y+I+ D S +D R + K
Sbjct: 178 LSGLCKARRIEEARCMLNEIKCNGFVPDGFTYSIIFDGLLKSDDGAGAALDLYREAIGKG 237
Query: 332 MRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNN 391
++ D + I +L+ +E AE+ + L + G VP + Y T++ GY ++ +
Sbjct: 238 VKIDNYTCSI-----LLNGLCKEGKVEKAEEVLKSLVEHGLVPGEVIYNTIVNGYCQIGD 292
Query: 392 LEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNI 451
+++ + ++M G++PN F +++D + + + D A W K+M G P + NI
Sbjct: 293 MDRAILTIEQMESRGLRPNCIAFNSVIDKFCEMQMIDKAEEWVKKMVGKGIAPSVETYNI 352
Query: 452 LL 453
L+
Sbjct: 353 LI 354
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 86/342 (25%), Positives = 158/342 (46%), Gaps = 11/342 (3%)
Query: 101 MLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSS 160
+LI YG+ F++ ++L M + G P+V+S+ +L+ + G+ AE + R M
Sbjct: 352 ILIDGYGRLCVFSRCFQILEEMEENGEKPNVISYGSLINCLCKDGKILEAEMVLRDMVGR 411
Query: 161 GPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDE-EKSPLKPDQKMFHMMIYMYKKAGG 219
G P+A Y +++ K +EA F DE K+ + ++ +I K G
Sbjct: 412 GVLPNANIYNMLIDGSCTVGKLREALRFF----DEMSKNGIGATIVTYNSLIKGLCKMGK 467
Query: 220 YEKARKLFALMAERGVQQSTVTYNSLMSFETN---YKEVSKIYDQMQRAGLQPDVVSYAL 276
++A ++F L+ G +TYNSL+S +N ++ ++Y+ M++ GL+P + ++
Sbjct: 468 LKEAEEMFFLITSTGHCPDVITYNSLISGYSNAGNSQKCLELYETMKKLGLKPTINTFHP 527
Query: 277 LINAYGK-ARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRD 335
LI+ K + +E L F EML + P YN ++ + +G V +A ++ K M
Sbjct: 528 LISGCSKEGIKLKETL--FNEMLQMNLSPDRVVYNAMIHCYQETGHVQKAFSLQKEMVDM 585
Query: 336 RCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKM 395
PD +Y +++ ++ + + +K G +P TY LI+G+ + +
Sbjct: 586 GVRPDNKTYNSLILGHLKEGKLSETKDLVDDMKAKGLIPEADTYSLLIQGHCDLKDFNGA 645
Query: 396 MEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEM 437
Y +M NG PN I + K+ A EM
Sbjct: 646 YVWYREMLENGFLPNVCICNELSTGLRKDGRLQEAQSICSEM 687
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 88/418 (21%), Positives = 172/418 (41%), Gaps = 36/418 (8%)
Query: 101 MLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSS 160
+LI K+ AEK+ M+ + P+ V+ L++ Y + G A + RM+
Sbjct: 106 VLIGGLCKEKRIRDAEKLFGEMSVRNLVPNRVTFNTLIDGYCKAGEVDVAIGLRERMKKE 165
Query: 161 GPRPSALTYQIILKLFVEANKFKEAEE-------------------VFMTLLDEEKSP-- 199
PS +T+ +L +A + +EA +F LL +
Sbjct: 166 KVEPSIITFNSLLSGLCKARRIEEARCMLNEIKCNGFVPDGFTYSIIFDGLLKSDDGAGA 225
Query: 200 ------------LKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMS 247
+K D +++ K G EKA ++ + E G+ V YN++++
Sbjct: 226 ALDLYREAIGKGVKIDNYTCSILLNGLCKEGKVEKAEEVLKSLVEHGLVPGEVIYNTIVN 285
Query: 248 FETNYKEVSK---IYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRP 304
++ + +QM+ GL+P+ +++ +I+ + + + ++A ++M+ G+ P
Sbjct: 286 GYCQIGDMDRAILTIEQMESRGLRPNCIAFNSVIDKFCEMQMIDKAEEWVKKMVGKGIAP 345
Query: 305 THKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFF 364
+ + YNIL+D + + + + + M + P++ SY ++++ + AE
Sbjct: 346 SVETYNILIDGYGRLCVFSRCFQILEEMEENGEKPNVISYGSLINCLCKDGKILEAEMVL 405
Query: 365 RRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKN 424
R + G +PN Y LI G V L + + +D+M NGI + +++ K
Sbjct: 406 RDMVGRGVLPNANIYNMLIDGSCTVGKLREALRFFDEMSKNGIGATIVTYNSLIKGLCKM 465
Query: 425 KDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGIN 482
A + + S G PD N L+S A + EL +P IN
Sbjct: 466 GKLKEAEEMFFLITSTGHCPDVITYNSLISGYSNAGNSQKCLELYETMKKLGLKPTIN 523
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 55/226 (24%), Positives = 109/226 (48%), Gaps = 1/226 (0%)
Query: 244 SLMSFETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVR 303
S+ S + +VS++YD M++ G P +++ + ++++ + L +F+EM+ G R
Sbjct: 4 SVCSESKMHSQVSELYDFMRQEGRLPSFGYVRMIVESLVESKKFDNVLDLFKEMVGLGFR 63
Query: 304 PTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKF 363
P Y + A G + A +F+ M+R + P++ Y ++ + AEK
Sbjct: 64 PDKLVYGRAMLAAVKLGDLKLAMELFETMKRRKVVPNVFVYNVLIGGLCKEKRIRDAEKL 123
Query: 364 FRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGK 423
F + VPN +T+ TLI GY K ++ + + ++M+ ++P+ F +++ K
Sbjct: 124 FGEMSVRNLVPNRVTFNTLIDGYCKAGEVDVAIGLRERMKKEKVEPSIITFNSLLSGLCK 183
Query: 424 NKDFDSAVVWYKEMESCGFPPDQKAKNILL-SLAKTADERNEANEL 468
+ + A E++ GF PD +I+ L K+ D A +L
Sbjct: 184 ARRIEEARCMLNEIKCNGFVPDGFTYSIIFDGLLKSDDGAGAALDL 229
>gi|115487378|ref|NP_001066176.1| Os12g0152600 [Oryza sativa Japonica Group]
gi|77553036|gb|ABA95832.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
sativa Japonica Group]
gi|113648683|dbj|BAF29195.1| Os12g0152600 [Oryza sativa Japonica Group]
gi|125535802|gb|EAY82290.1| hypothetical protein OsI_37500 [Oryza sativa Indica Group]
gi|125578525|gb|EAZ19671.1| hypothetical protein OsJ_35247 [Oryza sativa Japonica Group]
Length = 716
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 113/421 (26%), Positives = 187/421 (44%), Gaps = 16/421 (3%)
Query: 41 VGSAVAVLRSERTR-GQPLPKDL----VLGTLVRLKQLKKWNVVSEVLEWLRIQSWWDFN 95
V A +LR R G LP D+ V+ L R +L+K + + + + S + FN
Sbjct: 247 VDQAAKLLREMEARPGGCLPSDVTYNVVINGLARKGELEKAAQLVDRMRMSKKASAFTFN 306
Query: 96 EMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFR 155
LIT Y +G KA + M +G P+VV++ ++ R G + A F
Sbjct: 307 P-----LITGYFARGSVEKAGALQLEMENEGIVPTVVTYNTIIHGMFRSGNVEAARMKFV 361
Query: 156 RMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYK 215
M++ G P +TY ++ + +A KEA +F D +++ L P +++++ Y
Sbjct: 362 EMRAMGLLPDLITYNSLINGYCKAGNLKEALWLFG---DLKRAGLAPSVLTYNILLDGYC 418
Query: 216 KAGGYEKARKLFALMAERGVQQSTVTYNSLMSFET---NYKEVSKIYDQMQRAGLQPDVV 272
+ G E+AR+ M E+G Q TY LM+ N V + +D+M GLQPD
Sbjct: 419 RLGDLEEARRFKQEMVEQGCQPDVSTYTILMNGSRKVRNLAMVREFFDEMLSKGLQPDCF 478
Query: 273 SYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCM 332
+Y I+A EA + E M+ G+ YNI LD SG + A ++ M
Sbjct: 479 AYNTRISAELILGSTSEAFQLTEVMISRGISSDTVTYNIFLDGLCKSGNLKDAYVLWMKM 538
Query: 333 RRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNL 392
D PD +YT ++ A+ + A F + G P+ +TY I Y + NL
Sbjct: 539 VSDGLQPDCITYTCLIHAHCERGRLREARDIFDGMLVSGLPPSAVTYTVFIHAYCRRGNL 598
Query: 393 EKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNIL 452
+ KM G++PN+ + ++ A + + A + EM G P++ +L
Sbjct: 599 YSAYGWFQKMLEEGVRPNEVTYNVLIHALCRMGRTNLAYQHFHEMLERGLSPNKYTYTLL 658
Query: 453 L 453
+
Sbjct: 659 I 659
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 89/329 (27%), Positives = 152/329 (46%), Gaps = 8/329 (2%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
LI Y K G+ +A + + + G APSV+++ L++ Y R G + A + M G
Sbjct: 378 LINGYCKAGNLKEALWLFGDLKRAGLAPSVLTYNILLDGYCRLGDLEEARRFKQEMVEQG 437
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
+P TY I++ + E F +L + L+PD ++ I G
Sbjct: 438 CQPDVSTYTILMNGSRKVRNLAMVREFFDEMLSKG---LQPDCFAYNTRISAELILGSTS 494
Query: 222 KARKLFALMAERGVQQSTVTYNSLM---SFETNYKEVSKIYDQMQRAGLQPDVVSYALLI 278
+A +L +M RG+ TVTYN + N K+ ++ +M GLQPD ++Y LI
Sbjct: 495 EAFQLTEVMISRGISSDTVTYNIFLDGLCKSGNLKDAYVLWMKMVSDGLQPDCITYTCLI 554
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCS 338
+A+ + R EA +F+ ML +G+ P+ Y + + A+ G + A F+ M +
Sbjct: 555 HAHCERGRLREARDIFDGMLVSGLPPSAVTYTVFIHAYCRRGNLYSAYGWFQKMLEEGVR 614
Query: 339 PDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEI 398
P+ +Y ++ A A + F + + G PN TY LI G K N E+ + +
Sbjct: 615 PNEVTYNVLIHALCRMGRTNLAYQHFHEMLERGLSPNKYTYTLLIDGNCKEGNWEEAIRL 674
Query: 399 YDKMRVNGIKPNQTIFTTIMDAY--GKNK 425
Y +M +GI P+ + + G++K
Sbjct: 675 YSEMHQHGIHPDHCTHNALFKGFDEGQSK 703
Score = 118 bits (296), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 87/368 (23%), Positives = 155/368 (42%), Gaps = 36/368 (9%)
Query: 122 MNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANK 181
M G P + ++ A R+ + +++ M G PS +TY +L F +
Sbjct: 187 MAHHGVPPFIKECNLVLRALRDEARWDDMRSVYAEMLQLGIEPSIVTYNTLLDSFFREGR 246
Query: 182 FKEAEEVF---------------------------------MTLLDEEKSPLKPDQKMFH 208
+A ++ L+D + K F+
Sbjct: 247 VDQAAKLLREMEARPGGCLPSDVTYNVVINGLARKGELEKAAQLVDRMRMSKKASAFTFN 306
Query: 209 MMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMS--FETNYKEVSKI-YDQMQRA 265
+I Y G EKA L M G+ + VTYN+++ F + E +++ + +M+
Sbjct: 307 PLITGYFARGSVEKAGALQLEMENEGIVPTVVTYNTIIHGMFRSGNVEAARMKFVEMRAM 366
Query: 266 GLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQA 325
GL PD+++Y LIN Y KA +EAL +F ++ AG+ P+ YNILLD + G +++A
Sbjct: 367 GLLPDLITYNSLINGYCKAGNLKEALWLFGDLKRAGLAPSVLTYNILLDGYCRLGDLEEA 426
Query: 326 RTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKG 385
R + M C PD+ +YT +++ ++ +FF + G P+ Y T I
Sbjct: 427 RRFKQEMVEQGCQPDVSTYTILMNGSRKVRNLAMVREFFDEMLSKGLQPDCFAYNTRISA 486
Query: 386 YAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPD 445
+ + + ++ + M GI + + +D K+ + A V + +M S G PD
Sbjct: 487 ELILGSTSEAFQLTEVMISRGISSDTVTYNIFLDGLCKSGNLKDAYVLWMKMVSDGLQPD 546
Query: 446 QKAKNILL 453
L+
Sbjct: 547 CITYTCLI 554
Score = 109 bits (273), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 85/322 (26%), Positives = 152/322 (47%), Gaps = 9/322 (2%)
Query: 152 AIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMI 211
A FR M G P ++L+ + ++ + V+ +L + ++P ++ ++
Sbjct: 182 AAFREMAHHGVPPFIKECNLVLRALRDEARWDDMRSVYAEML---QLGIEPSIVTYNTLL 238
Query: 212 YMYKKAGGYEKARKLFALMAER--GVQQSTVTYNSLMSFETNYKEVSK---IYDQMQRAG 266
+ + G ++A KL M R G S VTYN +++ E+ K + D+M R
Sbjct: 239 DSFFREGRVDQAAKLLREMEARPGGCLPSDVTYNVVINGLARKGELEKAAQLVDRM-RMS 297
Query: 267 LQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQAR 326
+ ++ LI Y E+A A+ EM + G+ PT YN ++ SG V+ AR
Sbjct: 298 KKASAFTFNPLITGYFARGSVEKAGALQLEMENEGIVPTVVTYNTIIHGMFRSGNVEAAR 357
Query: 327 TVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGY 386
F MR PD+ +Y ++++ Y A +++ A F LK+ G P+V+TY L+ GY
Sbjct: 358 MKFVEMRAMGLLPDLITYNSLINGYCKAGNLKEALWLFGDLKRAGLAPSVLTYNILLDGY 417
Query: 387 AKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQ 446
++ +LE+ +M G +P+ + +T +M+ K ++ ++ EM S G PD
Sbjct: 418 CRLGDLEEARRFKQEMVEQGCQPDVSTYTILMNGSRKVRNLAMVREFFDEMLSKGLQPDC 477
Query: 447 KAKNILLSLAKTADERNEANEL 468
A N +S +EA +L
Sbjct: 478 FAYNTRISAELILGSTSEAFQL 499
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/233 (25%), Positives = 106/233 (45%), Gaps = 3/233 (1%)
Query: 259 YDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAI 318
+ +M G+ P + L++ A R ++ +V+ EML G+ P+ YN LLD+F
Sbjct: 184 FREMAHHGVPPFIKECNLVLRALRDEARWDDMRSVYAEMLQLGIEPSIVTYNTLLDSFFR 243
Query: 319 SGMVDQARTVFKCM--RRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNV 376
G VDQA + + M R C P +Y +++ ++E A + R++ +
Sbjct: 244 EGRVDQAAKLLREMEARPGGCLPSDVTYNVVINGLARKGELEKAAQLVDRMRMSKKA-SA 302
Query: 377 ITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKE 436
T+ LI GY ++EK + +M GI P + TI+ ++ + ++A + + E
Sbjct: 303 FTFNPLITGYFARGSVEKAGALQLEMENEGIVPTVVTYNTIIHGMFRSGNVEAARMKFVE 362
Query: 437 MESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGINGLSISVD 489
M + G PD N L++ A EA L G+ P + +I +D
Sbjct: 363 MRAMGLLPDLITYNSLINGYCKAGNLKEALWLFGDLKRAGLAPSVLTYNILLD 415
>gi|359477281|ref|XP_003631958.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g06920-like [Vitis vinifera]
Length = 898
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 113/450 (25%), Positives = 202/450 (44%), Gaps = 50/450 (11%)
Query: 58 LPKDL----VLGTLVRLKQLKKWNVVSEVLEWLR-IQSWWDFNEMDFLMLITAYGKQGDF 112
+P D+ ++G L + +L + + E LE R + + +N M I YG G F
Sbjct: 297 MPDDVTYTSMIGVLCKANRLDEAVELFEQLEQNRKVPCAYAYNTM-----IMGYGSAGKF 351
Query: 113 NKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRM--------------- 157
++A +L KG PSV+++ ++ G+ R + A IF M
Sbjct: 352 DEAYGLLERQKAKGSIPSVIAYNCILTCLGKKRRVEEALRIFEEMKRDAVPNVPTYNILI 411
Query: 158 -------------------QSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKS 198
+ +G P+ LT I++ +A K +EA +F + D+ +
Sbjct: 412 DMLCREGKLNAALEIRDDMERAGLFPNVLTVNIMIDRLCKAQKLEEACSIFEGMDDKVCT 471
Query: 199 PLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMS--FETNYKE-V 255
P + F +I K G + A L+ M + G + Y SL+ F+ KE
Sbjct: 472 P---NAVTFSSLIDGLGKCGRVDDAYSLYEKMLDCGHVPGAIVYTSLIRSFFKCGRKEDG 528
Query: 256 SKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDA 315
KIY +M G PD+ ++ KA E+ A+F E+ G P ++Y+IL+
Sbjct: 529 HKIYKEMVHTGCSPDLTLINTYMDCVFKAGETEKGRALFREINAHGFIPDARSYSILIHG 588
Query: 316 FAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPN 375
+G+ ++ +F M+ C D +Y ++ + + + A + +K G P
Sbjct: 589 LVKAGLANETYELFYAMKEQGCVLDTHAYNAVIDGFCKSGKVNKAYQLLEEMKVKGHPPT 648
Query: 376 VITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYK 435
V+TYG++I G AK++ L++ ++++ + NGIK N ++++++D +GK D A + +
Sbjct: 649 VVTYGSVIDGLAKIDRLDEAYMLFEEAKSNGIKLNVVVYSSLIDGFGKVGRIDEAYLIME 708
Query: 436 EMESCGFPPDQKAKNILLSLAKTADERNEA 465
E+ G P+ N LL A+E NEA
Sbjct: 709 ELMQKGLTPNVYTWNCLLDALVKAEEINEA 738
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 93/381 (24%), Positives = 183/381 (48%), Gaps = 7/381 (1%)
Query: 92 WDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAE 151
++ N F LI + ++G + A +L M +V + ++ +G+ G+ +
Sbjct: 226 YEVNVHLFTTLIRVFAREGRVDAALSLLDEMKSNSLDADIVLYNVCIDCFGKAGKVDMSW 285
Query: 152 AIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMI 211
F M+S G P +TY ++ + +AN+ EA E+F L K P ++ MI
Sbjct: 286 KFFHEMKSHGLMPDDVTYTSMIGVLCKANRLDEAVELFEQLEQNRKVPC---AYAYNTMI 342
Query: 212 YMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSF---ETNYKEVSKIYDQMQRAGLQ 268
Y AG +++A L +G S + YN +++ + +E +I+++M+R +
Sbjct: 343 MGYGSAGKFDEAYGLLERQKAKGSIPSVIAYNCILTCLGKKRRVEEALRIFEEMKRDAV- 401
Query: 269 PDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTV 328
P+V +Y +LI+ + + AL + ++M AG+ P NI++D + +++A ++
Sbjct: 402 PNVPTYNILIDMLCREGKLNAALEIRDDMERAGLFPNVLTVNIMIDRLCKAQKLEEACSI 461
Query: 329 FKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAK 388
F+ M C+P+ ++++++ ++ A + ++ G VP I Y +LI+ + K
Sbjct: 462 FEGMDDKVCTPNAVTFSSLIDGLGKCGRVDDAYSLYEKMLDCGHVPGAIVYTSLIRSFFK 521
Query: 389 VNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKA 448
E +IY +M G P+ T+ T MD K + + ++E+ + GF PD ++
Sbjct: 522 CGRKEDGHKIYKEMVHTGCSPDLTLINTYMDCVFKAGETEKGRALFREINAHGFIPDARS 581
Query: 449 KNILLSLAKTADERNEANELL 469
+IL+ A NE EL
Sbjct: 582 YSILIHGLVKAGLANETYELF 602
Score = 145 bits (365), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 112/472 (23%), Positives = 215/472 (45%), Gaps = 16/472 (3%)
Query: 10 MQKRRKVE----VFKDAADEA--GKKNWRRLMNQIEEVGSAVAVL--RSERTRGQPLPKD 61
+ K+R+VE +F++ +A + L++ + G A L R + R P
Sbjct: 380 LGKKRRVEEALRIFEEMKRDAVPNVPTYNILIDMLCREGKLNAALEIRDDMERAGLFPNV 439
Query: 62 LVLGTLV-RLKQLKKWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLS 120
L + ++ RL + +K + E + + N + F LI GK G + A +
Sbjct: 440 LTVNIMIDRLCKAQKLEEACSIFEGMDDKVCTP-NAVTFSSLIDGLGKCGRVDDAYSLYE 498
Query: 121 FMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEAN 180
M G+ P + +T+L+ ++ + GR ++ I++ M +G P + +A
Sbjct: 499 KMLDCGHVPGAIVYTSLIRSFFKCGRKEDGHKIYKEMVHTGCSPDLTLINTYMDCVFKAG 558
Query: 181 KFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTV 240
+ ++ +F + PD + + ++I+ KAG + +LF M E+G T
Sbjct: 559 ETEKGRALFREI---NAHGFIPDARSYSILIHGLVKAGLANETYELFYAMKEQGCVLDTH 615
Query: 241 TYNSLMSFETNYKEVSKIY---DQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEM 297
YN+++ +V+K Y ++M+ G P VV+Y +I+ K R +EA +FEE
Sbjct: 616 AYNAVIDGFCKSGKVNKAYQLLEEMKVKGHPPTVVTYGSVIDGLAKIDRLDEAYMLFEEA 675
Query: 298 LDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDM 357
G++ Y+ L+D F G +D+A + + + + +P++ ++ +L A V A ++
Sbjct: 676 KSNGIKLNVVVYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEI 735
Query: 358 EGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTI 417
A F+ +K PN ITY LI G +V K + +M+ G+KPN +TT+
Sbjct: 736 NEALICFQSMKDLKCPPNQITYSILINGLCRVRKFNKAFVFWQEMQKLGLKPNTITYTTM 795
Query: 418 MDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELL 469
+ K + A + ++ G PD + N ++ +A++ +A L
Sbjct: 796 ISGLAKAGNILEASGLFSRFKANGGIPDSASYNAMIEGLSSANKAMDAYALF 847
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 110/469 (23%), Positives = 196/469 (41%), Gaps = 40/469 (8%)
Query: 56 QPLPKDLVLGTLVRLKQLKKWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKA 115
+PLP +LV+G L K+LK N +W Q+ + L+ + +F+
Sbjct: 89 KPLP-ELVIGVL---KRLKDANTAVNYFQWAEKQTEKVHCPEAYNSLLMVMARNTEFDHL 144
Query: 116 EKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQII--- 172
E++L M+ G+ PS L+ + + + A I + M+ RP+ Y I+
Sbjct: 145 ERILEEMSLSGFGPSSNISIELVANCVKSRKLREAFDIIQTMRKFKFRPAFSAYTILIGA 204
Query: 173 ----------LKLF---------VEANKFKEAEEVF---------MTLLDEEKS-PLKPD 203
L LF V + F VF ++LLDE KS L D
Sbjct: 205 LSEVREPDPMLILFHQMQELGYEVNVHLFTTLIRVFAREGRVDAALSLLDEMKSNSLDAD 264
Query: 204 QKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSF---ETNYKEVSKIYD 260
++++ I + KAG + + K F M G+ VTY S++ E ++++
Sbjct: 265 IVLYNVCIDCFGKAGKVDMSWKFFHEMKSHGLMPDDVTYTSMIGVLCKANRLDEAVELFE 324
Query: 261 QMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISG 320
Q+++ P +Y +I YG A + +EA + E G P+ AYN +L
Sbjct: 325 QLEQNRKVPCAYAYNTMIMGYGSAGKFDEAYGLLERQKAKGSIPSVIAYNCILTCLGKKR 384
Query: 321 MVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYG 380
V++A +F+ M+RD P++ +Y ++ + A + +++ G PNV+T
Sbjct: 385 RVEEALRIFEEMKRDA-VPNVPTYNILIDMLCREGKLNAALEIRDDMERAGLFPNVLTVN 443
Query: 381 TLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESC 440
+I K LE+ I++ M PN F++++D GK D A Y++M C
Sbjct: 444 IMIDRLCKAQKLEEACSIFEGMDDKVCTPNAVTFSSLIDGLGKCGRVDDAYSLYEKMLDC 503
Query: 441 GFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGINGLSISVD 489
G P L+ + + +++ H P + ++ +D
Sbjct: 504 GHVPGAIVYTSLIRSFFKCGRKEDGHKIYKEMVHTGCSPDLTLINTYMD 552
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 66/265 (24%), Positives = 115/265 (43%), Gaps = 41/265 (15%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSH--------------------------- 134
+I + K G NKA ++L M KG+ P+VV++
Sbjct: 620 VIDGFCKSGKVNKAYQLLEEMKVKGHPPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSNG 679
Query: 135 --------TALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAE 186
++L++ +G+ GR A I + G P+ T+ +L V+A + EA
Sbjct: 680 IKLNVVVYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEINEAL 739
Query: 187 EVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLM 246
F ++ D K P P+Q + ++I + + KA + M + G++ +T+TY +++
Sbjct: 740 ICFQSMKDL-KCP--PNQITYSILINGLCRVRKFNKAFVFWQEMQKLGLKPNTITYTTMI 796
Query: 247 SF---ETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVR 303
S N E S ++ + + G PD SY +I A + +A A+FEE G
Sbjct: 797 SGLAKAGNILEASGLFSRFKANGGIPDSASYNAMIEGLSSANKAMDAYALFEETRLKGCN 856
Query: 304 PTHKAYNILLDAFAISGMVDQARTV 328
K +LLDA + ++QA V
Sbjct: 857 IHTKTCVVLLDALHKAECLEQAAIV 881
>gi|334183602|ref|NP_176522.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806282|sp|Q9C8T7.2|PP101_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g63330
gi|332195966|gb|AEE34087.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 559
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 101/406 (24%), Positives = 199/406 (49%), Gaps = 10/406 (2%)
Query: 53 TRGQPLPKDLVLGTLVR-LKQLKKWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGD 111
+ +PLP L+ + ++KK+++V + E ++ + N + +LI + ++
Sbjct: 2 VKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQ-RLGISHNLYTYNILINCFCRRSQ 60
Query: 112 FNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQI 171
+ A +L M K GY PS+V+ ++L+ Y G R +A A+ +M G RP +T+
Sbjct: 61 ISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTT 120
Query: 172 ILKLFVEANKFKEAEEVFMTLLDE-EKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALM 230
++ NK EA + L+D + +P+ + +++ K G + A L M
Sbjct: 121 LIHGLFLHNKASEA----VALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKM 176
Query: 231 AERGVQQSTVTYNSLMSFETNYKEVS---KIYDQMQRAGLQPDVVSYALLINAYGKARRE 287
++ V +N+++ Y+ V ++ +M+ G++P+VV+Y+ LI+ R
Sbjct: 177 EAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRW 236
Query: 288 EEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTM 347
+A + +M++ + P +N L+DAF G +A + M + PDI +Y ++
Sbjct: 237 SDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSL 296
Query: 348 LSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGI 407
++ + ++ A++ F + P++ TY TLIKG+ K +E E++ +M G+
Sbjct: 297 INGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGL 356
Query: 408 KPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILL 453
+ +TT++ + D D+A +K+M S G PPD +ILL
Sbjct: 357 VGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILL 402
Score = 142 bits (357), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 95/350 (27%), Positives = 167/350 (47%), Gaps = 6/350 (1%)
Query: 99 FLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQ 158
F +I + K + A + M KG P+VV++++L+ GR+ +A + M
Sbjct: 188 FNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMI 247
Query: 159 SSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAG 218
P+ +T+ ++ FV+ KF EAE++ ++ K + PD ++ +I +
Sbjct: 248 EKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMI---KRSIDPDIFTYNSLINGFCMHD 304
Query: 219 GYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEV---SKIYDQMQRAGLQPDVVSYA 275
+KA+++F M + TYN+L+ K V ++++ +M GL D V+Y
Sbjct: 305 RLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYT 364
Query: 276 LLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRD 335
LI + A VF++M+ GV P Y+ILLD +G +++A VF M++
Sbjct: 365 TLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKS 424
Query: 336 RCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKM 395
DI YTTM+ A ++ F L G PNV+TY T+I G L++
Sbjct: 425 EIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEA 484
Query: 396 MEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPD 445
+ KM+ +G P+ + T++ A+ ++ D ++ +EM SC F D
Sbjct: 485 YALLKKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGD 534
Score = 132 bits (333), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 85/369 (23%), Positives = 172/369 (46%), Gaps = 6/369 (1%)
Query: 88 IQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRY 147
+Q N + + +++ K+GD + A +L+ M VV ++++ +
Sbjct: 142 VQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHV 201
Query: 148 KNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMF 207
+A +F+ M++ G RP+ +TY ++ ++ +A ++ +++++ + P+ F
Sbjct: 202 DDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKK---INPNLVTF 258
Query: 208 HMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSK---IYDQMQR 264
+ +I + K G + +A KL M +R + TYNSL++ + + K +++ M
Sbjct: 259 NALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVS 318
Query: 265 AGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQ 324
PD+ +Y LI + K++R E+ +F EM G+ Y L+ G D
Sbjct: 319 KDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDN 378
Query: 325 ARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIK 384
A+ VFK M D PDI +Y+ +L N +E A + F +++ ++ Y T+I+
Sbjct: 379 AQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIE 438
Query: 385 GYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPP 444
G K ++ +++ + + G+KPN + T++ + A K+M+ G P
Sbjct: 439 GMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLP 498
Query: 445 DQKAKNILL 453
D N L+
Sbjct: 499 DSGTYNTLI 507
Score = 99.4 bits (246), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 63/255 (24%), Positives = 121/255 (47%), Gaps = 3/255 (1%)
Query: 238 STVTYNSLMSFETNYKE---VSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVF 294
S +N L+S K+ V + ++MQR G+ ++ +Y +LIN + + + ALA+
Sbjct: 9 SIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALL 68
Query: 295 EEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNA 354
+M+ G P+ + LL+ + + A + M PD ++TT++
Sbjct: 69 GKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLH 128
Query: 355 SDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIF 414
+ A R+ Q G PN++TYG ++ G K +++ + +KM I+ + IF
Sbjct: 129 NKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIF 188
Query: 415 TTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNH 474
TI+D+ K + D A+ +KEME+ G P+ + L+S + ++A++LL +
Sbjct: 189 NTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIE 248
Query: 475 PNNEPGINGLSISVD 489
P + + +D
Sbjct: 249 KKINPNLVTFNALID 263
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 69/317 (21%), Positives = 139/317 (43%), Gaps = 8/317 (2%)
Query: 157 MQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDE-EKSPLKPDQKMFHMMIYMYK 215
M S P PS + +L + KF ++ ++L ++ ++ + + ++++I +
Sbjct: 1 MVKSRPLPSIFEFNKLLSAIAKMKKF----DLVISLGEKMQRLGISHNLYTYNILINCFC 56
Query: 216 KAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVS---KIYDQMQRAGLQPDVV 272
+ A L M + G + S VT +SL++ + K +S + DQM G +PD +
Sbjct: 57 RRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTI 116
Query: 273 SYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCM 332
++ LI+ + EA+A+ + M+ G +P Y ++++ G +D A + M
Sbjct: 117 TFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKM 176
Query: 333 RRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNL 392
+ D+ + T++ + ++ A F+ ++ G PNV+TY +LI
Sbjct: 177 EAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRW 236
Query: 393 EKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNIL 452
++ M I PN F ++DA+ K F A + +M PD N L
Sbjct: 237 SDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSL 296
Query: 453 LSLAKTADERNEANELL 469
++ D ++A ++
Sbjct: 297 INGFCMHDRLDKAKQMF 313
>gi|115459104|ref|NP_001053152.1| Os04g0488500 [Oryza sativa Japonica Group]
gi|113564723|dbj|BAF15066.1| Os04g0488500 [Oryza sativa Japonica Group]
Length = 801
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 96/381 (25%), Positives = 180/381 (47%), Gaps = 24/381 (6%)
Query: 110 GDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTY 169
G F+KA +++ M +KG+ P +++ ++ + + A +F+ M+ G P TY
Sbjct: 267 GKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTY 326
Query: 170 QIILKLFVEANKFKEAEEVFMTLLDEEKSP-LKPDQKMFHMMIYMYKKAGGYEKARKLFA 228
I++ F +A ++A+ +F +E +S P + +I+ Y KA +A +F
Sbjct: 327 TILIDSFCKAGLIEQAQWLF----EEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFH 382
Query: 229 LMAERGVQQSTVTYNSLMSFETNYKEVSK---IYDQM----------------QRAGLQP 269
M + G + + VTY +L+ +SK +Y ++ R L P
Sbjct: 383 RMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAP 442
Query: 270 DVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVF 329
+VV+Y L++ KA + + A + + ML +G P H Y+ L+D F +G +D A+ VF
Sbjct: 443 NVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVF 502
Query: 330 KCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKV 389
M + P + +YT+++ ++ A K ++ +D PNV+TY +I G ++
Sbjct: 503 LQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRI 562
Query: 390 NNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAK 449
EK +++ M G PN +T ++D GK D ++ + +M G P+
Sbjct: 563 GESEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVTY 622
Query: 450 NILLSLAKTADERNEANELLG 470
+L++ A ++A LLG
Sbjct: 623 RVLINHLCAAGLLDKARLLLG 643
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 89/348 (25%), Positives = 157/348 (45%), Gaps = 25/348 (7%)
Query: 99 FLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQ 158
+ +LI ++ K G +A+ + M G +P+VV++TAL+ AY + + A IF RM
Sbjct: 326 YTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMV 385
Query: 159 SSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAG 218
+G RP+ +TY ++ +A +A EV+ L+ S D +
Sbjct: 386 DAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDS---ADSDFY----------- 431
Query: 219 GYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEV---SKIYDQMQRAGLQPDVVSYA 275
F + + VTY +L+ +V ++ D M +G +P+ + Y
Sbjct: 432 --------FPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYD 483
Query: 276 LLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRD 335
LI+ + KA + + A VF +M G P+ Y L+D G +D A V M +D
Sbjct: 484 ALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKD 543
Query: 336 RCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKM 395
C+P++ +YT M+ + E A K +++ G PNV+TY LI G K ++
Sbjct: 544 SCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLS 603
Query: 396 MEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFP 443
++++ +M G PN + +++ D A + EM+ +P
Sbjct: 604 LDLFTQMSRKGCSPNYVTYRVLINHLCAAGLLDKARLLLGEMKQTYWP 651
Score = 129 bits (323), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 93/406 (22%), Positives = 157/406 (38%), Gaps = 102/406 (25%)
Query: 135 TALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLD 194
+ LMEA + A + RM+ + P+ +TY+ +L F++ + + + ++
Sbjct: 115 SGLMEA----SYFDEAMSFLHRMRCNSCIPNVVTYRTLLSGFLKKKQLGWCKRIINMMMT 170
Query: 195 EEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKE 254
E P+ +F+ +++ Y Y A KL M G V YN + ++
Sbjct: 171 EG---CNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMTTCGCPPGYVVYNIFIGSICGQEK 227
Query: 255 VS---------KIY-----------------------------------DQMQRAGLQPD 270
+ KIY +M R G PD
Sbjct: 228 LPSPDLLDLAEKIYGEMLAANCVLNKVNVANFARCLCGVGKFDKAFQLIKEMMRKGFVPD 287
Query: 271 VVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFK 330
+Y+ +I A + E+A +F+EM GV P Y IL+D+F +G+++QA+ +F+
Sbjct: 288 TSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFE 347
Query: 331 CMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVN 390
MR CSP + +YT ++ AY+ A + A F R+ G PN +TYG L+ G K
Sbjct: 348 EMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAG 407
Query: 391 NLEKMMEIY--------------------------------------------------- 399
N+ K E+Y
Sbjct: 408 NISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELL 467
Query: 400 DKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPD 445
D M +G +PN ++ ++D + K DSA + +M CG+ P
Sbjct: 468 DAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPS 513
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 98/452 (21%), Positives = 178/452 (39%), Gaps = 57/452 (12%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + + L++ + K+ +++++ M +G P+ +L+ +Y Y A +
Sbjct: 141 NVVTYRTLLSGFLKKKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLL 200
Query: 155 RRMQSSGPRPSALTYQIIL-------------------KLFVEA-------NKFKEA--- 185
RM + G P + Y I + K++ E NK A
Sbjct: 201 NRMTTCGCPPGYVVYNIFIGSICGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFA 260
Query: 186 ---------EEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQ 236
++ F + + + PD + +I A EKA LF M GV
Sbjct: 261 RCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVT 320
Query: 237 QSTVTYNSLM-SFETN--YKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAV 293
TY L+ SF ++ ++++M+ G P VV+Y LI+AY KA++ +A +
Sbjct: 321 PDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDI 380
Query: 294 FEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTV----------------FKCMRRDRC 337
F M+DAG RP Y L+D +G + +A V F C R
Sbjct: 381 FHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTL 440
Query: 338 SPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMME 397
+P++ +Y ++ A ++ A + + G PN I Y LI G+ K ++ E
Sbjct: 441 APNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQE 500
Query: 398 IYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAK 457
++ +M G P+ +T+++D K+ D A+ +M P+ ++
Sbjct: 501 VFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLC 560
Query: 458 TADERNEANELLGNFNHPNNEPGINGLSISVD 489
E +A +LL P + + +D
Sbjct: 561 RIGESEKALKLLSLMEEKGCSPNVVTYTALID 592
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 83/342 (24%), Positives = 148/342 (43%), Gaps = 41/342 (11%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + + L+ K + A ++L M G P+ + + AL++ + + G+ +A+ +F
Sbjct: 443 NVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVF 502
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
+M G PS TY ++ + + A +V +L K P+ + MI
Sbjct: 503 LQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQML---KDSCTPNVVTYTAMIDGL 559
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVS---KIYDQMQRAGLQPDV 271
+ G EKA KL +LM E+G + VTY +L+ ++ ++ QM R G P+
Sbjct: 560 CRIGESEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNY 619
Query: 272 VSYALLINAYGKARREEEA---------------------------------LAVFEEML 298
V+Y +LIN A ++A L + EEM
Sbjct: 620 VTYRVLINHLCAAGLLDKARLLLGEMKQTYWPKYLQGYRCAIQGFSKSFIASLGILEEME 679
Query: 299 DAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCS--PDICSYTTMLSAYVNASD 356
G P Y +L+D F+ +G ++ A + K M S D Y +++ A AS
Sbjct: 680 SYGTVPIAPVYGMLIDCFSKAGRLEIAMELHKEMMEVPSSVKTDNDMYASLIQALCLASQ 739
Query: 357 MEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEI 398
+E A + + + + GFVP + + LIKG +V ++ +++
Sbjct: 740 VEEAFRLYSEMTRRGFVPELSVFVCLIKGLVEVKKWDEALQL 781
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 84/194 (43%), Gaps = 3/194 (1%)
Query: 260 DQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAIS 319
D ++ G +P V+Y L+ A + + V +EM ++G A
Sbjct: 29 DPLKDFGYRPSKVTYNALVQVLSSAGQVDLGFRVQKEMSESGFCMDRFTVGCFAHALCKE 88
Query: 320 GMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITY 379
G A + + R+ D T M+S + AS + A F R++ + +PNV+TY
Sbjct: 89 GRWADALDM---IEREDFKLDTVLCTHMISGLMEASYFDEAMSFLHRMRCNSCIPNVVTY 145
Query: 380 GTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMES 439
TL+ G+ K L I + M G PN ++F +++ +Y KD+ A M +
Sbjct: 146 RTLLSGFLKKKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMTT 205
Query: 440 CGFPPDQKAKNILL 453
CG PP NI +
Sbjct: 206 CGCPPGYVVYNIFI 219
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/246 (23%), Positives = 111/246 (45%), Gaps = 41/246 (16%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + + +I + G+ KA K+LS M +KG +P+VV++TAL++ G+ G+ + +F
Sbjct: 548 NVVTYTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLF 607
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVF------------------------- 189
+M G P+ +TY++++ A +A +
Sbjct: 608 TQMSRKGCSPNYVTYRVLINHLCAAGLLDKARLLLGEMKQTYWPKYLQGYRCAIQGFSKS 667
Query: 190 ----MTLLDEEKS----PLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAE--RGVQQST 239
+ +L+E +S P+ P ++ M+I + KAG E A +L M E V+
Sbjct: 668 FIASLGILEEMESYGTVPIAP---VYGMLIDCFSKAGRLEIAMELHKEMMEVPSSVKTDN 724
Query: 240 VTYNSL---MSFETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEE 296
Y SL + + +E ++Y +M R G P++ + LI + ++ +EAL +
Sbjct: 725 DMYASLIQALCLASQVEEAFRLYSEMTRRGFVPELSVFVCLIKGLVEVKKWDEALQLCYG 784
Query: 297 MLDAGV 302
+ GV
Sbjct: 785 ICHEGV 790
>gi|326490085|dbj|BAJ94116.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 641
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 110/473 (23%), Positives = 214/473 (45%), Gaps = 16/473 (3%)
Query: 9 FMQKRRKVEVFKDAADEAGKKNWRRLMNQIEEVGSA---VAVLRSERTRGQPLPKDLVL- 64
F R ++V N +++ I E G V +LR + G D+V
Sbjct: 159 FRSAVRALQVLHAKGCTLDSGNCNLVVSAICEQGCVDEGVELLRKLPSFG--CEPDIVSY 216
Query: 65 -GTLVRLKQLKKWNVVSEVL-EWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFM 122
L L K+W+ V E++ E +R+ N F LI + G F + + LS M
Sbjct: 217 NAVLKGLCMAKRWDDVEELMVEMVRVGC--PPNVATFNTLIAYLCRNGLFEQVHEALSQM 274
Query: 123 NKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKF 182
+ G P + + +++ + G ++ A I RM S G +P+ + Y +LK A ++
Sbjct: 275 PEHGCTPDLRMYATIIDGICKDGHHEVANDILSRMPSYGLKPNVVCYNTVLKGLCSAERW 334
Query: 183 KEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTY 242
+EAE++ + +E PL D F++++ + + G ++ +L M E G +TY
Sbjct: 335 EEAEDLLAEMF-QEDCPL--DDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCIPDVITY 391
Query: 243 NSLMSF---ETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLD 299
++++ E E + M G +P+ +SY +++ +A R +A + M+
Sbjct: 392 TTVINGFCKEGLVDEAVMLLKNMSACGCKPNTISYTIVLKGLCRAERWVDAQELISHMIQ 451
Query: 300 AGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEG 359
G P +N L++ G+V+QA + K M + CSPD+ SY+T++ A E
Sbjct: 452 QGCLPNPVTFNTLINFMCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEE 511
Query: 360 AEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMD 419
A + + G PN I Y ++ ++ +K+++++D ++ ++ + ++ ++
Sbjct: 512 ALELLNVMINKGITPNTIIYSSMASALSREGRTDKIIQMFDSIQDATVRSDAALYNAVIS 571
Query: 420 AYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNF 472
+ K + D A+ ++ M S G P++ IL+ + EA +LL
Sbjct: 572 SLCKRWETDRAIDFFAYMVSNGCMPNESTYTILIRGLASEGLVREAQDLLSEL 624
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 89/411 (21%), Positives = 169/411 (41%), Gaps = 56/411 (13%)
Query: 103 ITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGP 162
+ A G+ D +A ++ G A VV++ A++ Y R G+ A + +
Sbjct: 54 LCAAGRTADAARA------LDTAGDAAGVVAYNAMIAGYCRAGQVAAARRLAAAVPVP-- 105
Query: 163 RPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLK---PDQKMFHMMIYMYKKAGG 219
P+A TY I++ +A +T+LDE PL+ M H+++ + GG
Sbjct: 106 -PNAYTYFPIVRSLCARGLIADA----LTVLDE--MPLRGCAATPPMCHVILEAACRGGG 158
Query: 220 YEKARKLFALMAERGVQQSTVTYNSLMSF---ETNYKEVSKIYDQMQRAGLQPDVVSYAL 276
+ A + ++ +G + N ++S + E ++ ++ G +PD+VSY
Sbjct: 159 FRSAVRALQVLHAKGCTLDSGNCNLVVSAICEQGCVDEGVELLRKLPSFGCEPDIVSYNA 218
Query: 277 LINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDR 336
++ A+R ++ + EM+ G P +N L+ +G+ +Q M
Sbjct: 219 VLKGLCMAKRWDDVEELMVEMVRVGCPPNVATFNTLIAYLCRNGLFEQVHEALSQMPEHG 278
Query: 337 CSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLE--- 393
C+PD+ Y T++ E A R+ G PNV+ Y T++KG E
Sbjct: 279 CTPDLRMYATIIDGICKDGHHEVANDILSRMPSYGLKPNVVCYNTVLKGLCSAERWEEAE 338
Query: 394 --------------------------------KMMEIYDKMRVNGIKPNQTIFTTIMDAY 421
+++E+ ++M +G P+ +TT+++ +
Sbjct: 339 DLLAEMFQEDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCIPDVITYTTVINGF 398
Query: 422 GKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNF 472
K D AV+ K M +CG P+ + I+L A+ +A EL+ +
Sbjct: 399 CKEGLVDEAVMLLKNMSACGCKPNTISYTIVLKGLCRAERWVDAQELISHM 449
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 82/392 (20%), Positives = 156/392 (39%), Gaps = 41/392 (10%)
Query: 101 MLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSS 160
+++ A + G F A + L ++ KG + ++ A G + R++ S
Sbjct: 148 VILEAACRGGGFRSAVRALQVLHAKGCTLDSGNCNLVVSAICEQGCVDEGVELLRKLPSF 207
Query: 161 GPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGY 220
G P ++Y +LK A ++ + EE+ + ++ + P+ F+ +I + G +
Sbjct: 208 GCEPDIVSYNAVLKGLCMAKRWDDVEELMVEMV---RVGCPPNVATFNTLIAYLCRNGLF 264
Query: 221 EKARKLFALMAERGVQQSTVTYNSLMS--FETNYKEVSK-IYDQMQRAGLQPDVVSYALL 277
E+ + + M E G Y +++ + + EV+ I +M GL+P+VV Y +
Sbjct: 265 EQVHEALSQMPEHGCTPDLRMYATIIDGICKDGHHEVANDILSRMPSYGLKPNVVCYNTV 324
Query: 278 INAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRC 337
+ A R EEA + EM +NIL+D F +G+VD+
Sbjct: 325 LKGLCSAERWEEAEDLLAEMFQEDCPLDDVTFNILVDFFCQNGLVDRVI----------- 373
Query: 338 SPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMME 397
+ ++ + G +P+VITY T+I G+ K +++ +
Sbjct: 374 ------------------------ELLEQMLEHGCIPDVITYTTVINGFCKEGLVDEAVM 409
Query: 398 IYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAK 457
+ M G KPN +T ++ + + + A M G P+ N L++
Sbjct: 410 LLKNMSACGCKPNTISYTIVLKGLCRAERWVDAQELISHMIQQGCLPNPVTFNTLINFMC 469
Query: 458 TADERNEANELLGNFNHPNNEPGINGLSISVD 489
+A ELL P + S +D
Sbjct: 470 KKGLVEQAIELLKQMLVNGCSPDLISYSTVID 501
>gi|38344241|emb|CAE02059.2| OJ991113_30.18 [Oryza sativa Japonica Group]
Length = 736
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 96/381 (25%), Positives = 180/381 (47%), Gaps = 24/381 (6%)
Query: 110 GDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTY 169
G F+KA +++ M +KG+ P +++ ++ + + A +F+ M+ G P TY
Sbjct: 202 GKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTY 261
Query: 170 QIILKLFVEANKFKEAEEVFMTLLDEEKSP-LKPDQKMFHMMIYMYKKAGGYEKARKLFA 228
I++ F +A ++A+ +F +E +S P + +I+ Y KA +A +F
Sbjct: 262 TILIDSFCKAGLIEQAQWLF----EEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFH 317
Query: 229 LMAERGVQQSTVTYNSLMSFETNYKEVSK---IYDQM----------------QRAGLQP 269
M + G + + VTY +L+ +SK +Y ++ R L P
Sbjct: 318 RMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAP 377
Query: 270 DVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVF 329
+VV+Y L++ KA + + A + + ML +G P H Y+ L+D F +G +D A+ VF
Sbjct: 378 NVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVF 437
Query: 330 KCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKV 389
M + P + +YT+++ ++ A K ++ +D PNV+TY +I G ++
Sbjct: 438 LQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRI 497
Query: 390 NNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAK 449
EK +++ M G PN +T ++D GK D ++ + +M G P+
Sbjct: 498 GESEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVTY 557
Query: 450 NILLSLAKTADERNEANELLG 470
+L++ A ++A LLG
Sbjct: 558 RVLINHLCAAGLLDKARLLLG 578
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 89/348 (25%), Positives = 157/348 (45%), Gaps = 25/348 (7%)
Query: 99 FLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQ 158
+ +LI ++ K G +A+ + M G +P+VV++TAL+ AY + + A IF RM
Sbjct: 261 YTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMV 320
Query: 159 SSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAG 218
+G RP+ +TY ++ +A +A EV+ L+ S D +
Sbjct: 321 DAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDS---ADSDFY----------- 366
Query: 219 GYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEV---SKIYDQMQRAGLQPDVVSYA 275
F + + VTY +L+ +V ++ D M +G +P+ + Y
Sbjct: 367 --------FPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYD 418
Query: 276 LLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRD 335
LI+ + KA + + A VF +M G P+ Y L+D G +D A V M +D
Sbjct: 419 ALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKD 478
Query: 336 RCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKM 395
C+P++ +YT M+ + E A K +++ G PNV+TY LI G K ++
Sbjct: 479 SCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLS 538
Query: 396 MEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFP 443
++++ +M G PN + +++ D A + EM+ +P
Sbjct: 539 LDLFTQMSRKGCSPNYVTYRVLINHLCAAGLLDKARLLLGEMKQTYWP 586
Score = 128 bits (322), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 93/406 (22%), Positives = 157/406 (38%), Gaps = 102/406 (25%)
Query: 135 TALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLD 194
+ LMEA + A + RM+ + P+ +TY+ +L F++ + + + ++
Sbjct: 50 SGLMEA----SYFDEAMSFLHRMRCNSCIPNVVTYRTLLSGFLKKKQLGWCKRIINMMMT 105
Query: 195 EEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKE 254
E P+ +F+ +++ Y Y A KL M G V YN + ++
Sbjct: 106 EG---CNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMTTCGCPPGYVVYNIFIGSICGQEK 162
Query: 255 VS---------KIY-----------------------------------DQMQRAGLQPD 270
+ KIY +M R G PD
Sbjct: 163 LPSPDLLDLAEKIYGEMLAANCVLNKVNVANFARCLCGVGKFDKAFQLIKEMMRKGFVPD 222
Query: 271 VVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFK 330
+Y+ +I A + E+A +F+EM GV P Y IL+D+F +G+++QA+ +F+
Sbjct: 223 TSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFE 282
Query: 331 CMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVN 390
MR CSP + +YT ++ AY+ A + A F R+ G PN +TYG L+ G K
Sbjct: 283 EMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAG 342
Query: 391 NLEKMMEIY--------------------------------------------------- 399
N+ K E+Y
Sbjct: 343 NISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELL 402
Query: 400 DKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPD 445
D M +G +PN ++ ++D + K DSA + +M CG+ P
Sbjct: 403 DAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPS 448
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 98/452 (21%), Positives = 178/452 (39%), Gaps = 57/452 (12%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + + L++ + K+ +++++ M +G P+ +L+ +Y Y A +
Sbjct: 76 NVVTYRTLLSGFLKKKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLL 135
Query: 155 RRMQSSGPRPSALTYQIIL-------------------KLFVEA-------NKFKEA--- 185
RM + G P + Y I + K++ E NK A
Sbjct: 136 NRMTTCGCPPGYVVYNIFIGSICGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFA 195
Query: 186 ---------EEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQ 236
++ F + + + PD + +I A EKA LF M GV
Sbjct: 196 RCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVT 255
Query: 237 QSTVTYNSLM-SFETN--YKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAV 293
TY L+ SF ++ ++++M+ G P VV+Y LI+AY KA++ +A +
Sbjct: 256 PDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDI 315
Query: 294 FEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTV----------------FKCMRRDRC 337
F M+DAG RP Y L+D +G + +A V F C R
Sbjct: 316 FHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTL 375
Query: 338 SPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMME 397
+P++ +Y ++ A ++ A + + G PN I Y LI G+ K ++ E
Sbjct: 376 APNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQE 435
Query: 398 IYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAK 457
++ +M G P+ +T+++D K+ D A+ +M P+ ++
Sbjct: 436 VFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLC 495
Query: 458 TADERNEANELLGNFNHPNNEPGINGLSISVD 489
E +A +LL P + + +D
Sbjct: 496 RIGESEKALKLLSLMEEKGCSPNVVTYTALID 527
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 83/342 (24%), Positives = 148/342 (43%), Gaps = 41/342 (11%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + + L+ K + A ++L M G P+ + + AL++ + + G+ +A+ +F
Sbjct: 378 NVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVF 437
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
+M G PS TY ++ + + A +V +L K P+ + MI
Sbjct: 438 LQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQML---KDSCTPNVVTYTAMIDGL 494
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVS---KIYDQMQRAGLQPDV 271
+ G EKA KL +LM E+G + VTY +L+ ++ ++ QM R G P+
Sbjct: 495 CRIGESEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNY 554
Query: 272 VSYALLINAYGKARREEEA---------------------------------LAVFEEML 298
V+Y +LIN A ++A L + EEM
Sbjct: 555 VTYRVLINHLCAAGLLDKARLLLGEMKQTYWPKYLQGYRCAIQGFSKSFIASLGILEEME 614
Query: 299 DAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCS--PDICSYTTMLSAYVNASD 356
G P Y +L+D F+ +G ++ A + K M S D Y +++ A AS
Sbjct: 615 SYGTVPIAPVYGMLIDCFSKAGRLEIAMELHKEMMEVPSSVKTDNDMYASLIQALCLASQ 674
Query: 357 MEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEI 398
+E A + + + + GFVP + + LIKG +V ++ +++
Sbjct: 675 VEEAFRLYSEMTRRGFVPELSVFVCLIKGLVEVKKWDEALQL 716
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/246 (23%), Positives = 111/246 (45%), Gaps = 41/246 (16%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + + +I + G+ KA K+LS M +KG +P+VV++TAL++ G+ G+ + +F
Sbjct: 483 NVVTYTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLF 542
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVF------------------------- 189
+M G P+ +TY++++ A +A +
Sbjct: 543 TQMSRKGCSPNYVTYRVLINHLCAAGLLDKARLLLGEMKQTYWPKYLQGYRCAIQGFSKS 602
Query: 190 ----MTLLDEEKS----PLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAE--RGVQQST 239
+ +L+E +S P+ P ++ M+I + KAG E A +L M E V+
Sbjct: 603 FIASLGILEEMESYGTVPIAP---VYGMLIDCFSKAGRLEIAMELHKEMMEVPSSVKTDN 659
Query: 240 VTYNSL---MSFETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEE 296
Y SL + + +E ++Y +M R G P++ + LI + ++ +EAL +
Sbjct: 660 DMYASLIQALCLASQVEEAFRLYSEMTRRGFVPELSVFVCLIKGLVEVKKWDEALQLCYG 719
Query: 297 MLDAGV 302
+ GV
Sbjct: 720 ICHEGV 725
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 55/109 (50%)
Query: 345 TTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRV 404
T M+S + AS + A F R++ + +PNV+TY TL+ G+ K L I + M
Sbjct: 46 THMISGLMEASYFDEAMSFLHRMRCNSCIPNVVTYRTLLSGFLKKKQLGWCKRIINMMMT 105
Query: 405 NGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILL 453
G PN ++F +++ +Y KD+ A M +CG PP NI +
Sbjct: 106 EGCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMTTCGCPPGYVVYNIFI 154
>gi|242058301|ref|XP_002458296.1| hypothetical protein SORBIDRAFT_03g030790 [Sorghum bicolor]
gi|241930271|gb|EES03416.1| hypothetical protein SORBIDRAFT_03g030790 [Sorghum bicolor]
Length = 1035
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 89/344 (25%), Positives = 165/344 (47%), Gaps = 6/344 (1%)
Query: 129 PSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEV 188
P+VVS++ ++ + G+ +F M G P +TY ++ +A F AE V
Sbjct: 201 PNVVSYSTVINGFFTEGQVDKPYNLFLEMMDRGIPPDVVTYTTVIDGLCKAQLFDRAEAV 260
Query: 189 FMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSF 248
F ++D + +KP+ ++ +I+ Y G +++ ++ M+ G + + TY SL+++
Sbjct: 261 FQQMID---NGVKPNIDTYNCLIHGYLSIGKWKEVVRMLEEMSAGGPKPNCCTYGSLLNY 317
Query: 249 ETN---YKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPT 305
+E +D M G++P V +Y ++++ Y E + M+ G+ P
Sbjct: 318 LCKNGRCREARFFFDSMIGKGIKPSVTTYGIMLHGYATKGALSEMHDLLNLMVANGISPN 377
Query: 306 HKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFR 365
H +NI A+A G++D+A +F MR+ SPD SY ++ A ++ AE F
Sbjct: 378 HHIFNIFFSAYAKCGIIDKAMDIFNKMRQQGLSPDAVSYGALIDALCKLGRVDDAEVKFN 437
Query: 366 RLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNK 425
++ +G P+++ + +L+ G V+ EK+ E++ +M GI PN F TI+ K
Sbjct: 438 QMINEGVTPDIVVFSSLVYGLCTVDKWEKVEELFFEMLNVGIHPNIVFFNTILCNLCKEG 497
Query: 426 DFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELL 469
+E G PD + N L+ A +EA++LL
Sbjct: 498 RVMEGQRLVDSIECMGVRPDVISYNTLIDGHCLAGTIDEASKLL 541
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 94/365 (25%), Positives = 175/365 (47%), Gaps = 12/365 (3%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N F + +AY K G +KA + + M ++G +P VS+ AL++A + GR +AE F
Sbjct: 377 NHHIFNIFFSAYAKCGIIDKAMDIFNKMRQQGLSPDAVSYGALIDALCKLGRVDDAEVKF 436
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
+M + G P + + ++ +K+++ EE+F +L+ + P+ F+ ++
Sbjct: 437 NQMINEGVTPDIVVFSSLVYGLCTVDKWEKVEELFFEMLN---VGIHPNIVFFNTILCNL 493
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSLM---SFETNYKEVSKIYDQMQRAGLQPDV 271
K G + ++L + GV+ ++YN+L+ E SK+ + M GL+PD
Sbjct: 494 CKEGRVMEGQRLVDSIECMGVRPDVISYNTLIDGHCLAGTIDEASKLLEGMVSVGLKPDS 553
Query: 272 VSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKC 331
SY L++ Y KA R + A + F +ML G+ P YN +L + +A+ ++
Sbjct: 554 FSYNTLLHGYCKAGRIDSAYSHFRKMLSNGITPGVVTYNTILHGLFQTKRFSEAKELYLN 613
Query: 332 MRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNN 391
M DI +Y +L+ ++ ++ A K F+ L G N+IT+ +I K
Sbjct: 614 MINSGTKWDIYTYNIILNGLCKSNCVDEAIKMFQNLCSKGLQLNIITFNIMIGALLKGGR 673
Query: 392 LEKMMEIYDKMRVNGIKPNQTIFTTIMDAY---GKNKDFDSAVVWYKEMESCGFPPDQKA 448
E M+++ + NG+ N + +++ G ++FDS + ME G P+ +
Sbjct: 674 KEDAMDLFAAIPANGLVQNVVTYRLVVENLIEEGSLEEFDS---LFSAMEKNGTAPNSQM 730
Query: 449 KNILL 453
N L+
Sbjct: 731 LNALV 735
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 92/378 (24%), Positives = 170/378 (44%), Gaps = 6/378 (1%)
Query: 97 MDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRR 156
+ + +I K F++AE V M G P++ ++ L+ Y G++K +
Sbjct: 239 VTYTTVIDGLCKAQLFDRAEAVFQQMIDNGVKPNIDTYNCLIHGYLSIGKWKEVVRMLEE 298
Query: 157 MQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKK 216
M + GP+P+ TY +L + + +EA F +++ + +KP + +M++ Y
Sbjct: 299 MSAGGPKPNCCTYGSLLNYLCKNGRCREARFFFDSMIGK---GIKPSVTTYGIMLHGYAT 355
Query: 217 AGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSK---IYDQMQRAGLQPDVVS 273
G + L LM G+ + +N S + K I+++M++ GL PD VS
Sbjct: 356 KGALSEMHDLLNLMVANGISPNHHIFNIFFSAYAKCGIIDKAMDIFNKMRQQGLSPDAVS 415
Query: 274 YALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMR 333
Y LI+A K R ++A F +M++ GV P ++ L+ ++ +F M
Sbjct: 416 YGALIDALCKLGRVDDAEVKFNQMINEGVTPDIVVFSSLVYGLCTVDKWEKVEELFFEML 475
Query: 334 RDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLE 393
P+I + T+L + ++ ++ G P+VI+Y TLI G+ ++
Sbjct: 476 NVGIHPNIVFFNTILCNLCKEGRVMEGQRLVDSIECMGVRPDVISYNTLIDGHCLAGTID 535
Query: 394 KMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILL 453
+ ++ + M G+KP+ + T++ Y K DSA +++M S G P N +L
Sbjct: 536 EASKLLEGMVSVGLKPDSFSYNTLLHGYCKAGRIDSAYSHFRKMLSNGITPGVVTYNTIL 595
Query: 454 SLAKTADERNEANELLGN 471
+EA EL N
Sbjct: 596 HGLFQTKRFSEAKELYLN 613
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 99/456 (21%), Positives = 195/456 (42%), Gaps = 43/456 (9%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
LI Y G + + ++L M+ G P+ ++ +L+ + GR + A F M G
Sbjct: 279 LIHGYLSIGKWKEVVRMLEEMSAGGPKPNCCTYGSLLNYLCKNGRCREARFFFDSMIGKG 338
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
+PS TY I+L + E ++ ++ + + P+ +F++ Y K G +
Sbjct: 339 IKPSVTTYGIMLHGYATKGALSEMHDLLNLMV---ANGISPNHHIFNIFFSAYAKCGIID 395
Query: 222 KARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSKI---YDQMQRAGLQPDVVSYALLI 278
KA +F M ++G+ V+Y +L+ V ++QM G+ PD+V ++ L+
Sbjct: 396 KAMDIFNKMRQQGLSPDAVSYGALIDALCKLGRVDDAEVKFNQMINEGVTPDIVVFSSLV 455
Query: 279 NAYGKARREEEALAVFEEMLDAG-----------------------------------VR 303
+ E+ +F EML+ G VR
Sbjct: 456 YGLCTVDKWEKVEELFFEMLNVGIHPNIVFFNTILCNLCKEGRVMEGQRLVDSIECMGVR 515
Query: 304 PTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKF 363
P +YN L+D ++G +D+A + + M PD SY T+L Y A ++ A
Sbjct: 516 PDVISYNTLIDGHCLAGTIDEASKLLEGMVSVGLKPDSFSYNTLLHGYCKAGRIDSAYSH 575
Query: 364 FRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGK 423
FR++ +G P V+TY T++ G + + E+Y M +G K + + I++ K
Sbjct: 576 FRKMLSNGITPGVVTYNTILHGLFQTKRFSEAKELYLNMINSGTKWDIYTYNIILNGLCK 635
Query: 424 NKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGING 483
+ D A+ ++ + S G + NI++ + +A +L P N N
Sbjct: 636 SNCVDEAIKMFQNLCSKGLQLNIITFNIMIGALLKGGRKEDAMDLFAAI--PANGLVQNV 693
Query: 484 LSISVDEEDDDDDDDEDDDDNIYHDGDGDGDGDDNE 519
++ + E+ ++ ++ D+++ + +G +++
Sbjct: 694 VTYRLVVENLIEEGSLEEFDSLFSAMEKNGTAPNSQ 729
Score = 135 bits (339), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 98/385 (25%), Positives = 177/385 (45%), Gaps = 15/385 (3%)
Query: 81 EVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKK------GYAPSVVSH 134
E+L R S FN + + + G++ +++E V+S N+ AP+ ++
Sbjct: 39 ELLPHARPASVVAFNHL-LAAVSRSSGRRSTTSESETVVSLFNRMVRDCYIKVAPNRCTY 97
Query: 135 TALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLD 194
+ L+ + R G ++ A F + +G R + +L + + EA +V + +
Sbjct: 98 SILIGCFCRMGHLEHGFAAFGLILKTGWRMDHIVINQLLNGLCDGKRVGEAMDVLLQRMP 157
Query: 195 EEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQS---TVTYNSLMSFETN 251
E PD +++++ E+A +L +MA+ V V+Y+++++
Sbjct: 158 ELGC--MPDTVSYNILLKGLCNEKRAEEALELLHMMADDQVWSCPPNVVSYSTVINGFFT 215
Query: 252 YKEVSKIYD---QMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKA 308
+V K Y+ +M G+ PDVV+Y +I+ KA+ + A AVF++M+D GV+P
Sbjct: 216 EGQVDKPYNLFLEMMDRGIPPDVVTYTTVIDGLCKAQLFDRAEAVFQQMIDNGVKPNIDT 275
Query: 309 YNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLK 368
YN L+ + G + + + M P+ C+Y ++L+ A FF +
Sbjct: 276 YNCLIHGYLSIGKWKEVVRMLEEMSAGGPKPNCCTYGSLLNYLCKNGRCREARFFFDSMI 335
Query: 369 QDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFD 428
G P+V TYG ++ GYA L +M ++ + M NGI PN IF AY K D
Sbjct: 336 GKGIKPSVTTYGIMLHGYATKGALSEMHDLLNLMVANGISPNHHIFNIFFSAYAKCGIID 395
Query: 429 SAVVWYKEMESCGFPPDQKAKNILL 453
A+ + +M G PD + L+
Sbjct: 396 KAMDIFNKMRQQGLSPDAVSYGALI 420
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 94/390 (24%), Positives = 164/390 (42%), Gaps = 8/390 (2%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNA-EAI 153
N + +LI + + G + K G+ + L+ G R A + +
Sbjct: 93 NRCTYSILIGCFCRMGHLEHGFAAFGLILKTGWRMDHIVINQLLNGLCDGKRVGEAMDVL 152
Query: 154 FRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYM 213
+RM G P ++Y I+LK + +EA E+ + D++ P+ + +I
Sbjct: 153 LQRMPELGCMPDTVSYNILLKGLCNEKRAEEALELLHMMADDQVWSCPPNVVSYSTVING 212
Query: 214 YKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETN---YKEVSKIYDQMQRAGLQPD 270
+ G +K LF M +RG+ VTY +++ + ++ QM G++P+
Sbjct: 213 FFTEGQVDKPYNLFLEMMDRGIPPDVVTYTTVIDGLCKAQLFDRAEAVFQQMIDNGVKPN 272
Query: 271 VVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFK 330
+ +Y LI+ Y + +E + + EEM G +P Y LL+ +G +AR F
Sbjct: 273 IDTYNCLIHGYLSIGKWKEVVRMLEEMSAGGPKPNCCTYGSLLNYLCKNGRCREARFFFD 332
Query: 331 CMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVN 390
M P + +Y ML Y + + +G PN + YAK
Sbjct: 333 SMIGKGIKPSVTTYGIMLHGYATKGALSEMHDLLNLMVANGISPNHHIFNIFFSAYAKCG 392
Query: 391 NLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKN 450
++K M+I++KMR G+ P+ + ++DA K D A V + +M + G PD +
Sbjct: 393 IIDKAMDIFNKMRQQGLSPDAVSYGALIDALCKLGRVDDAEVKFNQMINEGVTPDIVVFS 452
Query: 451 ILLSLAKTADERNEANEL----LGNFNHPN 476
L+ T D+ + EL L HPN
Sbjct: 453 SLVYGLCTVDKWEKVEELFFEMLNVGIHPN 482
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 83/431 (19%), Positives = 186/431 (43%), Gaps = 37/431 (8%)
Query: 70 LKQLKKWNVVSEV-LEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYA 128
L Q K+++ E+ L + + WD + +++ K ++A K+ + KG
Sbjct: 598 LFQTKRFSEAKELYLNMINSGTKWDIYTYN--IILNGLCKSNCVDEAIKMFQNLCSKGLQ 655
Query: 129 PSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEV 188
++++ ++ A +GGR ++A +F + ++G + +TY+++++ +E +E + +
Sbjct: 656 LNIITFNIMIGALLKGGRKEDAMDLFAAIPANGLVQNVVTYRLVVENLIEEGSLEEFDSL 715
Query: 189 FMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSF 248
F + EK+ P+ +M + ++ G +A + + ER T + L+S
Sbjct: 716 FSAM---EKNGTAPNSQMLNALVRRLLHRGDISRAGAYLSKLDERNFSVEASTTSMLISI 772
Query: 249 ---------------------ETNYKEVSK----------IYDQMQRAGLQPDVVSYALL 277
E N + K ++ +M GL PDVV+Y +
Sbjct: 773 FSSDEYQHHAKSLPKKYRILNEANSSALIKKARRIDDAYSLFREMLMKGLTPDVVTYNTI 832
Query: 278 INAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRC 337
++ + R EA ++ M+++ + YNI+L+ S VD+A +F+ +
Sbjct: 833 LHGLFQTGRFSEAKELYLSMINSRTQMNIYTYNIILNGLCKSNCVDEAFKMFQSLCSKGL 892
Query: 338 SPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMME 397
+I ++ M+ A + E A F + +G VP+V+TY + + + +LE+
Sbjct: 893 QLNIITFNIMIGALLKGGRKEDAMDLFAAIPANGLVPDVVTYRLVAENLIEEGSLEEFDG 952
Query: 398 IYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAK 457
++ M +G + + ++ + D A + +++ F + + L+SL
Sbjct: 953 LFLTMEKSGTPLDSRLLNALVRRLLQRGDISRAGAYLSKLDEKNFSLEASTTSELISLFS 1012
Query: 458 TADERNEANEL 468
+ ++ A L
Sbjct: 1013 RGEYQHHAKSL 1023
>gi|225451352|ref|XP_002274891.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 577
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 97/383 (25%), Positives = 178/383 (46%), Gaps = 10/383 (2%)
Query: 101 MLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSS 160
+LI ++ A VL+ + K G+ P++ + L+ G+ +F +M
Sbjct: 99 ILINSFCHLQRLGFAFSVLAKILKLGHQPNIATFNTLIRGLCVEGKIGEVLHLFDKMIGE 158
Query: 161 GPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGY 220
G +P+ +TY ++ + A + ++ E+ +PD ++ +I K
Sbjct: 159 GFQPNVVTYGTLINGLCKVGSTSAAIRLLRSM---EQGNCQPDVVVYTSIIDSLCKDRQV 215
Query: 221 EKARKLFALMAERGVQQSTVTYNSLMSFETN---YKEVSKIYDQMQRAGLQPDVVSYALL 277
+A LF+ M +G+ S TYNSL+ N +K V+ + ++M + + P+VV ++ +
Sbjct: 216 TQAFNLFSEMIHQGISPSIFTYNSLIHALCNLCEWKHVTALLNEMVNSKIMPNVVIFSTV 275
Query: 278 INAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRC 337
++A K + EA V + M+ GV P YN L+D + +D+A VF M
Sbjct: 276 VDALCKEGKVMEAHDVVDMMIKRGVEPNVVTYNALMDGHCLRSEMDEAVKVFDTMVCKGF 335
Query: 338 SPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMME 397
+PD+ SY+T+++ Y +E A F + + +PN +TY TL+ G V L+ +
Sbjct: 336 APDVVSYSTLINGYCKIQRIEKAMYLFEEMCRKELIPNTVTYSTLMHGLCHVGRLQDAIA 395
Query: 398 IYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAK 457
++ +M G P+ + ++D KN+ D A+ K +E PD + I++
Sbjct: 396 LFHEMVTRGQIPDFVSYCILLDYLCKNRRLDEAIALLKAIEGSNMDPDIQIYTIVIDGMC 455
Query: 458 TADERNEANELLGNFN----HPN 476
A E A +L N + HPN
Sbjct: 456 RAGELEAARDLFSNLSSKGLHPN 478
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 120/477 (25%), Positives = 198/477 (41%), Gaps = 48/477 (10%)
Query: 37 QIEEVGSAVAVLRSERTRGQPLPKDLVLGTLVRLKQLKKWNVVSEVLEWL--RIQSWWDF 94
++ +G A +VL G P TL+R L + EVL I +
Sbjct: 106 HLQRLGFAFSVLAKILKLGHQ-PNIATFNTLIR--GLCVEGKIGEVLHLFDKMIGEGFQP 162
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + + LI K G + A ++L M + P VV +T+++++ + + A +F
Sbjct: 163 NVVTYGTLINGLCKVGSTSAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTQAFNLF 222
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEE-KSPLKPDQKMFHMMIYM 213
M G PS TY ++ ++K LL+E S + P+ +F ++
Sbjct: 223 SEMIHQGISPSIFTYNSLIHALCNLCEWKHVT----ALLNEMVNSKIMPNVVIFSTVVDA 278
Query: 214 YKKAGGYEKARKLFALMAERGVQQSTVTYNSLM---SFETNYKEVSKIYDQMQRAGLQPD 270
K G +A + +M +RGV+ + VTYN+LM + E K++D M G PD
Sbjct: 279 LCKEGKVMEAHDVVDMMIKRGVEPNVVTYNALMDGHCLRSEMDEAVKVFDTMVCKGFAPD 338
Query: 271 VVSYALLINAYGKARREE-----------------------------------EALAVFE 295
VVSY+ LIN Y K +R E +A+A+F
Sbjct: 339 VVSYSTLINGYCKIQRIEKAMYLFEEMCRKELIPNTVTYSTLMHGLCHVGRLQDAIALFH 398
Query: 296 EMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNAS 355
EM+ G P +Y ILLD + +D+A + K + PDI YT ++ A
Sbjct: 399 EMVTRGQIPDFVSYCILLDYLCKNRRLDEAIALLKAIEGSNMDPDIQIYTIVIDGMCRAG 458
Query: 356 DMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFT 415
++E A F L G PNV TY +I G + L + +++ +M+ G PN +
Sbjct: 459 ELEAARDLFSNLSSKGLHPNVWTYTIMINGLCQQGLLAEASKLFGEMKRKGYSPNGCTYN 518
Query: 416 TIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNF 472
I + +N + + +EM + GF D +L+ + ++L F
Sbjct: 519 LITRGFLRNNETLRGIQLLQEMLARGFSADVSTSTVLVEMLSDDGLDQSVKQILSEF 575
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 107/427 (25%), Positives = 179/427 (41%), Gaps = 44/427 (10%)
Query: 104 TAYGKQGDFNKAEKVLSFMNKKGY---APSVVSHTALMEAYGRGGRYKNAEAIFRRMQSS 160
T + K +FN + LS N+ + PS+ T L+ + + Y ++ +M S
Sbjct: 29 TFHSKSLNFNTLDDALSSFNRMLHMHPPPSIADFTKLLISITKMKHYSTVLSLSHQMDSF 88
Query: 161 GPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGY 220
G P+ T I++ F + A V +L K +P+ F+ +I G
Sbjct: 89 GIPPNIYTLNILINSFCHLQRLGFAFSVLAKIL---KLGHQPNIATFNTLIRGLCVEGKI 145
Query: 221 EKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVS---KIYDQMQRAGLQPDVVSYALL 277
+ LF M G Q + VTY +L++ S ++ M++ QPDVV Y +
Sbjct: 146 GEVLHLFDKMIGEGFQPNVVTYGTLINGLCKVGSTSAAIRLLRSMEQGNCQPDVVVYTSI 205
Query: 278 INAYGKARREEEALAVFEEMLDAGVRPTHKAYNILL------------------------ 313
I++ K R+ +A +F EM+ G+ P+ YN L+
Sbjct: 206 IDSLCKDRQVTQAFNLFSEMIHQGISPSIFTYNSLIHALCNLCEWKHVTALLNEMVNSKI 265
Query: 314 -----------DAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEK 362
DA G V +A V M + P++ +Y ++ + S+M+ A K
Sbjct: 266 MPNVVIFSTVVDALCKEGKVMEAHDVVDMMIKRGVEPNVVTYNALMDGHCLRSEMDEAVK 325
Query: 363 FFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYG 422
F + GF P+V++Y TLI GY K+ +EK M ++++M + PN ++T+M
Sbjct: 326 VFDTMVCKGFAPDVVSYSTLINGYCKIQRIEKAMYLFEEMCRKELIPNTVTYSTLMHGLC 385
Query: 423 KNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGIN 482
A+ + EM + G PD + ILL +EA LL N +P I
Sbjct: 386 HVGRLQDAIALFHEMVTRGQIPDFVSYCILLDYLCKNRRLDEAIALLKAIEGSNMDPDIQ 445
Query: 483 GLSISVD 489
+I +D
Sbjct: 446 IYTIVID 452
>gi|225447241|ref|XP_002272784.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g73710-like [Vitis vinifera]
Length = 1008
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 95/391 (24%), Positives = 189/391 (48%), Gaps = 7/391 (1%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
+ + F +I G G ++AE +L+ M ++G +P ++ + Y GG A +
Sbjct: 379 DTITFNTMIYTCGSHGHLSEAETLLTEMEERGISPDTKTYNIFLSLYADGGNIDAALKCY 438
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
R+++ G P +T++ +L + E N E E V + ++S ++ D+ ++I MY
Sbjct: 439 RKIREVGLFPDVVTHRAVLHVLCERNMVGEVETVIAEM---KRSRVRVDEHSIPVVIKMY 495
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETN---YKEVSKIYDQMQRAGLQPDV 271
G +KA K+F + S+ T +++ + E ++ + G + DV
Sbjct: 496 VNEGLLDKA-KIFLEEHLLEDELSSRTRVAIIDAYAEKGLWAEAENVFIGKRDLGQKKDV 554
Query: 272 VSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKC 331
V Y +++ AYGKA+ ++A ++F+ M + G P YN L+ F+ +VD+AR +
Sbjct: 555 VEYNVMVKAYGKAKLYDKAFSLFKGMRNHGTWPNESTYNSLIQMFSGGDLVDEARGILAE 614
Query: 332 MRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNN 391
M++ P +++ +++ Y + A + + + G PN + YG+LI G+++ N
Sbjct: 615 MQKMGFKPQCLTFSAVIACYARLGRLPDAVGVYEEMVRLGVKPNEVVYGSLINGFSETGN 674
Query: 392 LEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNI 451
+E+ + + KM GI NQ + T+++ AY K + A Y+ M+ PD A N
Sbjct: 675 VEEALCYFRKMDEFGISANQIVLTSLIKAYSKVGCLEGAKTLYEGMKDLEGGPDIVASNS 734
Query: 452 LLSLAKTADERNEANELLGNFNHPNNEPGIN 482
+++L +EA + + + G++
Sbjct: 735 MINLYADLGLVSEAKLIFDDLRQKGSADGVS 765
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 89/404 (22%), Positives = 180/404 (44%), Gaps = 13/404 (3%)
Query: 38 IEEVGSAVAVLRSERTRGQPLPKDLVLGTLVRLKQLKKWNVVSEVLEWLRIQSWWDFNEM 97
++E +A ++ + Q L V+ RL +L V E + L ++ NE+
Sbjct: 605 VDEARGILAEMQKMGFKPQCLTFSAVIACYARLGRLPDAVGVYEEMVRLGVKP----NEV 660
Query: 98 DFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRM 157
+ LI + + G+ +A M++ G + + + T+L++AY + G + A+ ++ M
Sbjct: 661 VYGSLINGFSETGNVEEALCYFRKMDEFGISANQIVLTSLIKAYSKVGCLEGAKTLYEGM 720
Query: 158 QSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKA 217
+ P + ++ L+ + EA+ +F D+ + D F M+Y+YK
Sbjct: 721 KDLEGGPDIVASNSMINLYADLGLVSEAKLIF----DDLRQKGSADGVSFATMMYLYKNL 776
Query: 218 GGYEKARKLFALMAERGVQQSTVTYNSLMS-FETN--YKEVSKIYDQMQRAGLQPDVVSY 274
G ++A + M + G+ + ++N +M+ + TN ++ +M + PD ++
Sbjct: 777 GMLDEAIDVADEMKQSGLLRDCASFNKVMACYATNGQLSACGELLHEMISRRILPDTGTF 836
Query: 275 ALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRR 334
++ K EA+ E G +A ++ F+ G+ A +
Sbjct: 837 KVMFTVLKKGGLPTEAVTQLESSYQEGKPYARQA--VITSVFSTVGLHAFALESCETFLN 894
Query: 335 DRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEK 394
D Y + AY + ++ A K F +++ +G P+++TY L Y K LE
Sbjct: 895 AEVDLDSSFYNVAIYAYGASGSIDKALKMFMKMQDEGLEPDLVTYINLAGCYGKAGMLEG 954
Query: 395 MMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEME 438
+ IY +++ I+PN+++F I+DAY K D A + +EM+
Sbjct: 955 LKRIYSQLKYREIEPNESLFKAIIDAYRSAKRHDLAELVSQEMK 998
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 96/468 (20%), Positives = 181/468 (38%), Gaps = 57/468 (12%)
Query: 68 VRLKQLKKWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGY 127
V LK+ W V V EW++ Q + N + + +++ G+ +++ M K G
Sbjct: 156 VILKEQSSWERVLRVFEWIKSQEDYVPNVIHYNVVLRVLGRAQKWDELRLCWIEMAKNGV 215
Query: 128 APSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEE 187
P+ ++ L++ YG+ G K A + M+ G P + ++++ +A +F A+
Sbjct: 216 LPTNNTYGMLVDVYGKAGLVKEALLWIKHMKLRGVFPDEVAMNTVVRVLKDAGEFDWADR 275
Query: 188 VFM---------------TLLDEEKSPLKPDQKMFHMMIYMYKKAGG------------- 219
+ ++ D + + H + K GG
Sbjct: 276 FYRDWCVGKVELGDFDLESVADSDDEIGSAPVSLKHFLSTELFKIGGRRPISNIMDSSNT 335
Query: 220 -------------------YEKARKL------FALMAERGVQQSTVTYNSLM---SFETN 251
Y KA +L FA M + GV T+T+N+++ +
Sbjct: 336 DGSRRKPRLTATYNTLIDLYGKAGRLKDAADVFAEMLKLGVAMDTITFNTMIYTCGSHGH 395
Query: 252 YKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNI 311
E + +M+ G+ PD +Y + ++ Y + AL + ++ + G+ P +
Sbjct: 396 LSEAETLLTEMEERGISPDTKTYNIFLSLYADGGNIDAALKCYRKIREVGLFPDVVTHRA 455
Query: 312 LLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDG 371
+L MV + TV M+R R D S ++ YVN ++ A K F
Sbjct: 456 VLHVLCERNMVGEVETVIAEMKRSRVRVDEHSIPVVIKMYVNEGLLDKA-KIFLEEHLLE 514
Query: 372 FVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAV 431
+ T +I YA+ + ++ R G K + + ++ AYGK K +D A
Sbjct: 515 DELSSRTRVAIIDAYAEKGLWAEAENVFIGKRDLGQKKDVVEYNVMVKAYGKAKLYDKAF 574
Query: 432 VWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEP 479
+K M + G P++ N L+ + D +EA +L +P
Sbjct: 575 SLFKGMRNHGTWPNESTYNSLIQMFSGGDLVDEARGILAEMQKMGFKP 622
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 82/420 (19%), Positives = 178/420 (42%), Gaps = 42/420 (10%)
Query: 86 LRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGG 145
+R W NE + LI + ++A +L+ M K G+ P ++ +A++ Y R G
Sbjct: 580 MRNHGTWP-NESTYNSLIQMFSGGDLVDEARGILAEMQKMGFKPQCLTFSAVIACYARLG 638
Query: 146 RYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQK 205
R +A ++ M G +P+ + Y ++ F E +EA F + ++ + +Q
Sbjct: 639 RLPDAVGVYEEMVRLGVKPNEVVYGSLINGFSETGNVEEALCYFRKM---DEFGISANQI 695
Query: 206 MFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSK---IYDQM 262
+ +I Y K G E A+ L+ M + V NS+++ + VS+ I+D +
Sbjct: 696 VLTSLIKAYSKVGCLEGAKTLYEGMKDLEGGPDIVASNSMINLYADLGLVSEAKLIFDDL 755
Query: 263 QRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMV 322
++ G D VS+A ++ Y +EA+ V +EM +G+ ++N ++ +A +G +
Sbjct: 756 RQKG-SADGVSFATMMYLYKNLGMLDEAIDVADEMKQSGLLRDCASFNKVMACYATNGQL 814
Query: 323 DQARTVFKCMRRDRCSPDICSYTTMLSAYVNA-------SDMEGAEKFFRRLKQDGFVPN 375
+ M R PD ++ M + + +E + + + + + +
Sbjct: 815 SACGELLHEMISRRILPDTGTFKVMFTVLKKGGLPTEAVTQLESSYQEGKPYARQAVITS 874
Query: 376 VIT--------------------------YGTLIKGYAKVNNLEKMMEIYDKMRVNGIKP 409
V + Y I Y +++K ++++ KM+ G++P
Sbjct: 875 VFSTVGLHAFALESCETFLNAEVDLDSSFYNVAIYAYGASGSIDKALKMFMKMQDEGLEP 934
Query: 410 NQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELL 469
+ + + YGK + Y +++ P++ ++ ++A +R++ EL+
Sbjct: 935 DLVTYINLAGCYGKAGMLEGLKRIYSQLKYREIEPNESLFKAIIDAYRSA-KRHDLAELV 993
Score = 59.3 bits (142), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 68/146 (46%), Gaps = 7/146 (4%)
Query: 355 SDMEGAEKFFRRLK-QDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTI 413
S E + F +K Q+ +VPNVI Y +++ + +++ + +M NG+ P
Sbjct: 162 SSWERVLRVFEWIKSQEDYVPNVIHYNVVLRVLGRAQKWDELRLCWIEMAKNGVLPTNNT 221
Query: 414 FTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFN 473
+ ++D YGK A++W K M+ G PD+ A N ++ + K A E + A+ ++
Sbjct: 222 YGMLVDVYGKAGLVKEALLWIKHMKLRGVFPDEVAMNTVVRVLKDAGEFDWADRFYRDWC 281
Query: 474 HPNNEPGINGLSISVDEEDDDDDDDE 499
E G D E D DDE
Sbjct: 282 VGKVELG------DFDLESVADSDDE 301
>gi|147771991|emb|CAN69054.1| hypothetical protein VITISV_022964 [Vitis vinifera]
Length = 586
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 97/383 (25%), Positives = 178/383 (46%), Gaps = 10/383 (2%)
Query: 101 MLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSS 160
+LI ++ A VL+ + K G+ P++ + L+ G+ +F +M
Sbjct: 108 ILINSFCHLQRLGFAFSVLAKILKLGHQPNIATFNTLIRGLCVEGKIGEVLHLFDKMIGE 167
Query: 161 GPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGY 220
G +P+ +TY ++ + A + ++ E+ +PD ++ +I K
Sbjct: 168 GFQPNVVTYGTLINGLCKVGSTSAAIRLLRSM---EQGNCQPDVVVYTSIIDSLCKDRQV 224
Query: 221 EKARKLFALMAERGVQQSTVTYNSLMSFETN---YKEVSKIYDQMQRAGLQPDVVSYALL 277
+A LF+ M +G+ S TYNSL+ N +K V+ + ++M + + P+VV ++ +
Sbjct: 225 TQAFNLFSEMIHQGISPSIFTYNSLIHALCNLCEWKHVTALLNEMVNSKIMPNVVIFSTV 284
Query: 278 INAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRC 337
++A K + EA V + M+ GV P YN L+D + +D+A VF M
Sbjct: 285 VDALCKEGKVMEAHDVVDMMIKRGVEPNVVTYNALMDGHCLRSEMDEAVKVFDTMVCKGF 344
Query: 338 SPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMME 397
+PD+ SY+T+++ Y +E A F + + +PN +TY TL+ G V L+ +
Sbjct: 345 APDVVSYSTLINGYCKIQRIEKAMYLFEEMCRKELIPNTVTYSTLMHGLCHVGRLQDAIA 404
Query: 398 IYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAK 457
++ +M G P+ + ++D KN+ D A+ K +E PD + I++
Sbjct: 405 LFHEMVTRGQIPDFVSYCILLDYLCKNRRLDEAIALLKAIEGSNMDPDIQIYTIVIDGMC 464
Query: 458 TADERNEANELLGNFN----HPN 476
A E A +L N + HPN
Sbjct: 465 RAGELEAARDLFSNLSSKGLHPN 487
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 120/477 (25%), Positives = 198/477 (41%), Gaps = 48/477 (10%)
Query: 37 QIEEVGSAVAVLRSERTRGQPLPKDLVLGTLVRLKQLKKWNVVSEVLEWL--RIQSWWDF 94
++ +G A +VL G P TL+R L + EVL I +
Sbjct: 115 HLQRLGFAFSVLAKILKLGHQ-PNIATFNTLIR--GLCVEGKIGEVLHLFDKMIGEGFQP 171
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + + LI K G + A ++L M + P VV +T+++++ + + A +F
Sbjct: 172 NVVTYGTLINGLCKVGSTSAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTQAFNLF 231
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEE-KSPLKPDQKMFHMMIYM 213
M G PS TY ++ ++K LL+E S + P+ +F ++
Sbjct: 232 SEMIHQGISPSIFTYNSLIHALCNLCEWKHVT----ALLNEMVNSKIMPNVVIFSTVVDA 287
Query: 214 YKKAGGYEKARKLFALMAERGVQQSTVTYNSLM---SFETNYKEVSKIYDQMQRAGLQPD 270
K G +A + +M +RGV+ + VTYN+LM + E K++D M G PD
Sbjct: 288 LCKEGKVMEAHDVVDMMIKRGVEPNVVTYNALMDGHCLRSEMDEAVKVFDTMVCKGFAPD 347
Query: 271 VVSYALLINAYGKARREE-----------------------------------EALAVFE 295
VVSY+ LIN Y K +R E +A+A+F
Sbjct: 348 VVSYSTLINGYCKIQRIEKAMYLFEEMCRKELIPNTVTYSTLMHGLCHVGRLQDAIALFH 407
Query: 296 EMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNAS 355
EM+ G P +Y ILLD + +D+A + K + PDI YT ++ A
Sbjct: 408 EMVTRGQIPDFVSYCILLDYLCKNRRLDEAIALLKAIEGSNMDPDIQIYTIVIDGMCRAG 467
Query: 356 DMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFT 415
++E A F L G PNV TY +I G + L + +++ +M+ G PN +
Sbjct: 468 ELEAARDLFSNLSSKGLHPNVWTYTIMINGLCQQGLLAEASKLFGEMKRKGYSPNGCTYN 527
Query: 416 TIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNF 472
I + +N + + +EM + GF D +L+ + ++L F
Sbjct: 528 LITRGFLRNNETLRGIQLLQEMLARGFSADVSTSTVLVEMLSDDGLDQSVKQILSEF 584
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 107/427 (25%), Positives = 179/427 (41%), Gaps = 44/427 (10%)
Query: 104 TAYGKQGDFNKAEKVLSFMNKKGY---APSVVSHTALMEAYGRGGRYKNAEAIFRRMQSS 160
T + K +FN + LS N+ + PS+ T L+ + + Y ++ +M S
Sbjct: 38 TFHSKSLNFNTLDDALSSFNRMLHMHPPPSIADFTKLLISITKMKHYSTVLSLSHQMDSF 97
Query: 161 GPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGY 220
G P+ T I++ F + A V +L K +P+ F+ +I G
Sbjct: 98 GIPPNIYTLNILINSFCHLQRLGFAFSVLAKIL---KLGHQPNIATFNTLIRGLCVEGKI 154
Query: 221 EKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVS---KIYDQMQRAGLQPDVVSYALL 277
+ LF M G Q + VTY +L++ S ++ M++ QPDVV Y +
Sbjct: 155 GEVLHLFDKMIGEGFQPNVVTYGTLINGLCKVGSTSAAIRLLRSMEQGNCQPDVVVYTSI 214
Query: 278 INAYGKARREEEALAVFEEMLDAGVRPTHKAYNILL------------------------ 313
I++ K R+ +A +F EM+ G+ P+ YN L+
Sbjct: 215 IDSLCKDRQVTQAFNLFSEMIHQGISPSIFTYNSLIHALCNLCEWKHVTALLNEMVNSKI 274
Query: 314 -----------DAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEK 362
DA G V +A V M + P++ +Y ++ + S+M+ A K
Sbjct: 275 MPNVVIFSTVVDALCKEGKVMEAHDVVDMMIKRGVEPNVVTYNALMDGHCLRSEMDEAVK 334
Query: 363 FFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYG 422
F + GF P+V++Y TLI GY K+ +EK M ++++M + PN ++T+M
Sbjct: 335 VFDTMVCKGFAPDVVSYSTLINGYCKIQRIEKAMYLFEEMCRKELIPNTVTYSTLMHGLC 394
Query: 423 KNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGIN 482
A+ + EM + G PD + ILL +EA LL N +P I
Sbjct: 395 HVGRLQDAIALFHEMVTRGQIPDFVSYCILLDYLCKNRRLDEAIALLKAIEGSNMDPDIQ 454
Query: 483 GLSISVD 489
+I +D
Sbjct: 455 IYTIVID 461
>gi|414871539|tpg|DAA50096.1| TPA: ATP binding protein [Zea mays]
Length = 692
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 111/470 (23%), Positives = 218/470 (46%), Gaps = 21/470 (4%)
Query: 13 RRKVEVFKD-----AADEAGKKNWRRLMNQIEEVGS---AVAVLRSERTRGQPLPKDLVL 64
R V V +D A + G N ++N I + GS A+ +LR + G D+V
Sbjct: 211 RSAVRVLEDLHARGCALDVGNCNL--VLNAICDQGSVDEALHLLRDLPSFG--CEPDVVS 266
Query: 65 --GTLVRLKQLKKWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFM 122
L L K+W V E++E + ++ N + F LI+ + G F + +VL+ M
Sbjct: 267 YNAVLKGLCMAKRWGCVQELMEEM-VRMACPPNIVTFNTLISYLCRNGLFERVHEVLAQM 325
Query: 123 NKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKF 182
+ G P + + +++ + G + A I RM S G +P+ + Y +LK A ++
Sbjct: 326 VEHGCTPDIRMYATIIDGICKEGHLEVAHEILNRMPSYGLKPNVVCYNTLLKGLCSAERW 385
Query: 183 KEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTY 242
+E EE+ + D++ PL D F++++ + + G ++ +L M E G +TY
Sbjct: 386 EETEELLAEMFDKD-CPL--DDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCMPDVITY 442
Query: 243 NSLMSF---ETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLD 299
++++ E E + M G +P+ +SY +++ A R +A + +M+
Sbjct: 443 TTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIVLKGLCSAERWVDAEDLMSQMIQ 502
Query: 300 AGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEG 359
G +N L++ G+V+QA + K M + CSPD+ SY+T++ A +
Sbjct: 503 QGCPLNPITFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTDE 562
Query: 360 AEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMD 419
A + + G PN I Y ++ ++ + K+++++D ++ I+ + ++ ++
Sbjct: 563 ALELLNVMVNKGMSPNTIIYSSIASALSREGRINKVIQMFDNIQDTTIRSDAVLYNAVIS 622
Query: 420 AYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELL 469
+ K + + A+ + M S G P++ IL+ + EA E+L
Sbjct: 623 SLCKRGETERAIEFLAYMVSSGCVPNESTYTILIRGLASEGFVKEAQEML 672
Score = 131 bits (330), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 88/377 (23%), Positives = 171/377 (45%), Gaps = 9/377 (2%)
Query: 101 MLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSS 160
+++ A QG ++A +L + G P VVS+ A+++ R+ + + M
Sbjct: 234 LVLNAICDQGSVDEALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRM 293
Query: 161 GPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGY 220
P+ +T+ ++ F+ EV +++ +P D +M+ +I K G
Sbjct: 294 ACPPNIVTFNTLISYLCRNGLFERVHEVLAQMVEHGCTP---DIRMYATIIDGICKEGHL 350
Query: 221 EKARKLFALMAERGVQQSTVTYNSLM---SFETNYKEVSKIYDQMQRAGLQPDVVSYALL 277
E A ++ M G++ + V YN+L+ ++E ++ +M D V++ +L
Sbjct: 351 EVAHEILNRMPSYGLKPNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNIL 410
Query: 278 INAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRC 337
++ + + + + + E+ML+ G P Y +++ F G++D+A + K M C
Sbjct: 411 VDFFCQNGLVDRVIELLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGC 470
Query: 338 SPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMME 397
P+ SYT +L +A AE ++ Q G N IT+ TLI K +E+ +E
Sbjct: 471 KPNTISYTIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQAIE 530
Query: 398 IYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAK 457
+ +M VNG P+ ++T++D GK D A+ M + G P+ I S+A
Sbjct: 531 LLKQMLVNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTI---IYSSIAS 587
Query: 458 TADERNEANELLGNFNH 474
N+++ F++
Sbjct: 588 ALSREGRINKVIQMFDN 604
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 89/374 (23%), Positives = 168/374 (44%), Gaps = 6/374 (1%)
Query: 99 FLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQ 158
+ +++ A + G F A +VL ++ +G A V + ++ A G A + R +
Sbjct: 197 YHVILEAACRGGGFRSAVRVLEDLHARGCALDVGNCNLVLNAICDQGSVDEALHLLRDLP 256
Query: 159 SSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAG 218
S G P ++Y +LK A ++ +E+ ++ + P+ F+ +I + G
Sbjct: 257 SFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMV---RMACPPNIVTFNTLISYLCRNG 313
Query: 219 GYEKARKLFALMAERGVQQSTVTYNSLM---SFETNYKEVSKIYDQMQRAGLQPDVVSYA 275
+E+ ++ A M E G Y +++ E + + +I ++M GL+P+VV Y
Sbjct: 314 LFERVHEVLAQMVEHGCTPDIRMYATIIDGICKEGHLEVAHEILNRMPSYGLKPNVVCYN 373
Query: 276 LLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRD 335
L+ A R EE + EM D +NIL+D F +G+VD+ + + M
Sbjct: 374 TLLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEH 433
Query: 336 RCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKM 395
C PD+ +YTT+++ + ++ A + + G PN I+Y ++KG
Sbjct: 434 GCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIVLKGLCSAERWVDA 493
Query: 396 MEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSL 455
++ +M G N F T+++ K + A+ K+M G PD + + ++
Sbjct: 494 EDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDG 553
Query: 456 AKTADERNEANELL 469
A + +EA ELL
Sbjct: 554 LGKAGKTDEALELL 567
Score = 105 bits (262), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 75/352 (21%), Positives = 159/352 (45%), Gaps = 43/352 (12%)
Query: 59 PKDLVLGTLVR-LKQLKKWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEK 117
P + TL++ L ++W E+L + +++ F +L+ + + G ++ +
Sbjct: 367 PNVVCYNTLLKGLCSAERWEETEELLAEM-FDKDCPLDDVTFNILVDFFCQNGLVDRVIE 425
Query: 118 VLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFV 177
+L M + G P V+++T ++ + + G A + + M + G +P+ ++Y I+LK
Sbjct: 426 LLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIVLKGLC 485
Query: 178 EANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQ 237
A ++ +AE+ M+ + ++ PL P
Sbjct: 486 SAERWVDAED-LMSQMIQQGCPLNP----------------------------------- 509
Query: 238 STVTYNSLMSFETN---YKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVF 294
+T+N+L++F ++ ++ QM G PD++SY+ +I+ GKA + +EAL +
Sbjct: 510 --ITFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTDEALELL 567
Query: 295 EEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNA 354
M++ G+ P Y+ + A + G +++ +F ++ D Y ++S+
Sbjct: 568 NVMVNKGMSPNTIIYSSIASALSREGRINKVIQMFDNIQDTTIRSDAVLYNAVISSLCKR 627
Query: 355 SDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNG 406
+ E A +F + G VPN TY LI+G A +++ E+ ++ G
Sbjct: 628 GETERAIEFLAYMVSSGCVPNESTYTILIRGLASEGFVKEAQEMLTELCSKG 679
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/267 (24%), Positives = 114/267 (42%), Gaps = 6/267 (2%)
Query: 207 FHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSL---MSFETNYKEVSKIYDQMQ 263
++ M+ Y +AG E AR+L A + V + TY + + + + D+M
Sbjct: 130 YNAMVAGYCRAGQLESARRLAAAVP---VPPNAYTYFPVVRALCARGRIADALAVLDEMP 186
Query: 264 RAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVD 323
R G P Y +++ A + A+ V E++ G N++L+A G VD
Sbjct: 187 RRGCAPIPPMYHVILEAACRGGGFRSAVRVLEDLHARGCALDVGNCNLVLNAICDQGSVD 246
Query: 324 QARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLI 383
+A + + + C PD+ SY +L A ++ + + PN++T+ TLI
Sbjct: 247 EALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTLI 306
Query: 384 KGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFP 443
+ E++ E+ +M +G P+ ++ TI+D K + A M S G
Sbjct: 307 SYLCRNGLFERVHEVLAQMVEHGCTPDIRMYATIIDGICKEGHLEVAHEILNRMPSYGLK 366
Query: 444 PDQKAKNILLSLAKTADERNEANELLG 470
P+ N LL +A+ E ELL
Sbjct: 367 PNVVCYNTLLKGLCSAERWEETEELLA 393
Score = 45.1 bits (105), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 34/139 (24%), Positives = 59/139 (42%), Gaps = 5/139 (3%)
Query: 344 YTTMLSAYVNASDMEGAEKFFRRLKQDGFVP-NVITYGTLIKGYAKVNNLEKMMEIYDKM 402
Y M++ Y A +E A RRL VP N TY +++ + + + D+M
Sbjct: 130 YNAMVAGYCRAGQLESA----RRLAAAVPVPPNAYTYFPVVRALCARGRIADALAVLDEM 185
Query: 403 RVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADER 462
G P ++ I++A + F SAV +++ + G D N++L+
Sbjct: 186 PRRGCAPIPPMYHVILEAACRGGGFRSAVRVLEDLHARGCALDVGNCNLVLNAICDQGSV 245
Query: 463 NEANELLGNFNHPNNEPGI 481
+EA LL + EP +
Sbjct: 246 DEALHLLRDLPSFGCEPDV 264
>gi|302794007|ref|XP_002978768.1| hypothetical protein SELMODRAFT_109608 [Selaginella moellendorffii]
gi|300153577|gb|EFJ20215.1| hypothetical protein SELMODRAFT_109608 [Selaginella moellendorffii]
Length = 713
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 91/371 (24%), Positives = 185/371 (49%), Gaps = 6/371 (1%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
++ AY + G+ E +L+ M ++G+ ++ +T ++ + + + F R+++ G
Sbjct: 242 IVQAYCQAGNMETVEALLAQMEEEGFQGNLGLYTTVLNGFAEIRDEEKCLSFFHRLKACG 301
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
P+A TY I+KLF +A +A ++ L + +K + P++ ++ M++ Y + G +
Sbjct: 302 LSPTAATYGCIVKLFTKAGNMAKALDI---LEEMDKHGVSPNKMIYAMIMDGYARGGDFT 358
Query: 222 KARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSK---IYDQMQRAGLQPDVVSYALLI 278
A K++ M G++ VTYN L+ + K + + +Q L P + +Y ++
Sbjct: 359 AAFKVWEDMVSAGLKPDIVTYNILVHAFCKAGRMDKALGVLENIQANRLLPTIETYTSIL 418
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCS 338
+ Y K ++AL VF+ + AG+RP +YN LL A + ++ AR + M +
Sbjct: 419 DGYVKGGHIQKALEVFDRIKTAGLRPGVVSYNSLLSGLAKARQMENARLMLDEMLANGVV 478
Query: 339 PDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEI 398
P+ SYT + Y A D+E A F+R+K++ +++ YG L+K K +++ +E+
Sbjct: 479 PNERSYTALTEGYARAGDVEKAFGMFQRMKKENLAIDIVAYGALLKACCKSGAMQRAVEV 538
Query: 399 YDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKT 458
+ ++ G+K N+ + T++D + + + A K+M+ GF D +
Sbjct: 539 FQQITDAGLKHNRITYCTMLDGWARKGELSKARDLLKDMQKHGFHLDTICYTSFIKACFR 598
Query: 459 ADERNEANELL 469
+ + E E L
Sbjct: 599 SGDTEEVTETL 609
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 91/374 (24%), Positives = 175/374 (46%), Gaps = 6/374 (1%)
Query: 99 FLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQ 158
+ LI AY + D A M +G + +++ Y G + AE F + +
Sbjct: 169 YTSLIHAYAEARDMEGAVACTEEMLSQGIQLNEAVFCSIISGYASAGNNEAAEHWFEKFK 228
Query: 159 SSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAG 218
+ P + Y I++ + +A E E + ++EE + + ++ ++ + +
Sbjct: 229 AENLVPGGIVYNSIVQAYCQAGNM-ETVEALLAQMEEE--GFQGNLGLYTTVLNGFAEIR 285
Query: 219 GYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSK---IYDQMQRAGLQPDVVSYA 275
EK F + G+ + TY ++ T ++K I ++M + G+ P+ + YA
Sbjct: 286 DEEKCLSFFHRLKACGLSPTAATYGCIVKLFTKAGNMAKALDILEEMDKHGVSPNKMIYA 345
Query: 276 LLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRD 335
++++ Y + A V+E+M+ AG++P YNIL+ AF +G +D+A V + ++ +
Sbjct: 346 MIMDGYARGGDFTAAFKVWEDMVSAGLKPDIVTYNILVHAFCKAGRMDKALGVLENIQAN 405
Query: 336 RCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKM 395
R P I +YT++L YV ++ A + F R+K G P V++Y +L+ G AK +E
Sbjct: 406 RLLPTIETYTSILDGYVKGGHIQKALEVFDRIKTAGLRPGVVSYNSLLSGLAKARQMENA 465
Query: 396 MEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSL 455
+ D+M NG+ PN+ +T + + Y + D + A ++ M+ D A LL
Sbjct: 466 RLMLDEMLANGVVPNERSYTALTEGYARAGDVEKAFGMFQRMKKENLAIDIVAYGALLKA 525
Query: 456 AKTADERNEANELL 469
+ A E+
Sbjct: 526 CCKSGAMQRAVEVF 539
Score = 145 bits (366), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 92/379 (24%), Positives = 177/379 (46%), Gaps = 6/379 (1%)
Query: 94 FNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAI 153
NE F +I+ Y G+ AE + P + + ++++AY + G + EA+
Sbjct: 199 LNEAVFCSIISGYASAGNNEAAEHWFEKFKAENLVPGGIVYNSIVQAYCQAGNMETVEAL 258
Query: 154 FRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYM 213
+M+ G + + Y +L F E ++ F L + L P + ++ +
Sbjct: 259 LAQMEEEGFQGNLGLYTTVLNGFAEIRDEEKCLSFFHRL---KACGLSPTAATYGCIVKL 315
Query: 214 YKKAGGYEKARKLFALMAERGVQQSTVTYNSLM---SFETNYKEVSKIYDQMQRAGLQPD 270
+ KAG KA + M + GV + + Y +M + ++ K+++ M AGL+PD
Sbjct: 316 FTKAGNMAKALDILEEMDKHGVSPNKMIYAMIMDGYARGGDFTAAFKVWEDMVSAGLKPD 375
Query: 271 VVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFK 330
+V+Y +L++A+ KA R ++AL V E + + PT + Y +LD + G + +A VF
Sbjct: 376 IVTYNILVHAFCKAGRMDKALGVLENIQANRLLPTIETYTSILDGYVKGGHIQKALEVFD 435
Query: 331 CMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVN 390
++ P + SY ++LS A ME A + +G VPN +Y L +GYA+
Sbjct: 436 RIKTAGLRPGVVSYNSLLSGLAKARQMENARLMLDEMLANGVVPNERSYTALTEGYARAG 495
Query: 391 NLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKN 450
++EK ++ +M+ + + + ++ A K+ AV ++++ G ++
Sbjct: 496 DVEKAFGMFQRMKKENLAIDIVAYGALLKACCKSGAMQRAVEVFQQITDAGLKHNRITYC 555
Query: 451 ILLSLAKTADERNEANELL 469
+L E ++A +LL
Sbjct: 556 TMLDGWARKGELSKARDLL 574
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 92/356 (25%), Positives = 172/356 (48%), Gaps = 6/356 (1%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
++ + K G+ KA +L M+K G +P+ + + +M+ Y RGG + A ++ M S+G
Sbjct: 312 IVKLFTKAGNMAKALDILEEMDKHGVSPNKMIYAMIMDGYARGGDFTAAFKVWEDMVSAG 371
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
+P +TY I++ F +A + +A V + + + L P + + ++ Y K G +
Sbjct: 372 LKPDIVTYNILVHAFCKAGRMDKALGVLENI---QANRLLPTIETYTSILDGYVKGGHIQ 428
Query: 222 KARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSK---IYDQMQRAGLQPDVVSYALLI 278
KA ++F + G++ V+YNSL+S +++ + D+M G+ P+ SY L
Sbjct: 429 KALEVFDRIKTAGLRPGVVSYNSLLSGLAKARQMENARLMLDEMLANGVVPNERSYTALT 488
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCS 338
Y +A E+A +F+ M + AY LL A SG + +A VF+ +
Sbjct: 489 EGYARAGDVEKAFGMFQRMKKENLAIDIVAYGALLKACCKSGAMQRAVEVFQQITDAGLK 548
Query: 339 PDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEI 398
+ +Y TML + ++ A + +++ GF + I Y + IK + + E++ E
Sbjct: 549 HNRITYCTMLDGWARKGELSKARDLLKDMQKHGFHLDTICYTSFIKACFRSGDTEEVTET 608
Query: 399 YDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLS 454
MR ++ N +TT++ + D D A+ Y++ ++ G D N LLS
Sbjct: 609 LAVMREKKLEVNARTYTTLIHGWLAAADPDQAISCYEQAKASGLQLDSALSNCLLS 664
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 79/318 (24%), Positives = 145/318 (45%), Gaps = 7/318 (2%)
Query: 179 ANKFKEAEEV----FMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERG 234
A +F+E E+ + +++ + KP + + +++ Y + G AR F M
Sbjct: 102 AQRFRETMEIDAGNWHKIVNAFQVIDKPVLREYGLLVDFYARHGDKVAARATFEAMRASH 161
Query: 235 VQQSTVTYNSLMSFETNYKEVS---KIYDQMQRAGLQPDVVSYALLINAYGKARREEEAL 291
++ + Y SL+ +++ ++M G+Q + + +I+ Y A E A
Sbjct: 162 IKPNVHIYTSLIHAYAEARDMEGAVACTEEMLSQGIQLNEAVFCSIISGYASAGNNEAAE 221
Query: 292 AVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAY 351
FE+ + P YN ++ A+ +G ++ + M + ++ YTT+L+ +
Sbjct: 222 HWFEKFKAENLVPGGIVYNSIVQAYCQAGNMETVEALLAQMEEEGFQGNLGLYTTVLNGF 281
Query: 352 VNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQ 411
D E FF RLK G P TYG ++K + K N+ K ++I ++M +G+ PN+
Sbjct: 282 AEIRDEEKCLSFFHRLKACGLSPTAATYGCIVKLFTKAGNMAKALDILEEMDKHGVSPNK 341
Query: 412 TIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGN 471
I+ IMD Y + DF +A +++M S G PD NIL+ A ++A +L N
Sbjct: 342 MIYAMIMDGYARGGDFTAAFKVWEDMVSAGLKPDIVTYNILVHAFCKAGRMDKALGVLEN 401
Query: 472 FNHPNNEPGINGLSISVD 489
P I + +D
Sbjct: 402 IQANRLLPTIETYTSILD 419
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 80/329 (24%), Positives = 147/329 (44%), Gaps = 41/329 (12%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N+M + M++ Y + GDF A KV M G P +V++ L+ A+ + GR A +
Sbjct: 340 NKMIYAMIMDGYARGGDFTAAFKVWEDMVSAGLKPDIVTYNILVHAFCKAGRMDKALGVL 399
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
+Q++ P+ TY IL +V+ ++A EVF + + + L+P ++ ++
Sbjct: 400 ENIQANRLLPTIETYTSILDGYVKGGHIQKALEVFDRI---KTAGLRPGVVSYNSLLSGL 456
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSK---IYDQMQRAGLQPDV 271
KA E AR + M GV + +Y +L +V K ++ +M++ L D+
Sbjct: 457 AKARQMENARLMLDEMLANGVVPNERSYTALTEGYARAGDVEKAFGMFQRMKKENLAIDI 516
Query: 272 VSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKC 331
V+Y L+ A K+ + A+ VF+++ DAG++ Y +LD +A G + +AR + K
Sbjct: 517 VAYGALLKACCKSGAMQRAVEVFQQITDAGLKHNRITYCTMLDGWARKGELSKARDLLKD 576
Query: 332 MRRDRCSPD-IC----------------------------------SYTTMLSAYVNASD 356
M++ D IC +YTT++ ++ A+D
Sbjct: 577 MQKHGFHLDTICYTSFIKACFRSGDTEEVTETLAVMREKKLEVNARTYTTLIHGWLAAAD 636
Query: 357 MEGAEKFFRRLKQDGFVPNVITYGTLIKG 385
+ A + + K G + L+ G
Sbjct: 637 PDQAISCYEQAKASGLQLDSALSNCLLSG 665
>gi|242084770|ref|XP_002442810.1| hypothetical protein SORBIDRAFT_08g003240 [Sorghum bicolor]
gi|241943503|gb|EES16648.1| hypothetical protein SORBIDRAFT_08g003240 [Sorghum bicolor]
Length = 722
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 112/418 (26%), Positives = 195/418 (46%), Gaps = 22/418 (5%)
Query: 47 VLRSERTRGQ-PLPKDL----VLGTLVRLKQLKKWNVVSEVLEWLRIQ---SWWDFNEMD 98
+L+ TRG LP D+ V+ L R L++ +E++E +R+ S + +N
Sbjct: 259 LLKEMETRGSGCLPNDVTHNVVITGLARKGDLEE---AAEMVEGMRLSKKASSFTYNP-- 313
Query: 99 FLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQ 158
LIT +G KA+ + M +G P+VV++ A++ + G+ + A+ F M+
Sbjct: 314 ---LITGLLAKGFVKKADDLQLEMENEGIMPTVVTYNAMIHGLLQSGQVEAAQVKFVEMR 370
Query: 159 SSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAG 218
+ G +P +TY +L + +A KEA +F D + L P ++++I Y + G
Sbjct: 371 AMGLQPDVITYNSLLNGYCKAGSLKEALLLFG---DLRHAGLAPTVLTYNILIDGYCRLG 427
Query: 219 GYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVS---KIYDQMQRAGLQPDVVSYA 275
E+AR+L M E+G TY LM N ++ + +D+M GLQPD +Y
Sbjct: 428 DLEEARRLKEEMVEQGCLPDVCTYTILMKGSHNACSLAMAREFFDEMLSKGLQPDCFAYN 487
Query: 276 LLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRD 335
I A +A + E M+ G+ YNIL+D +G ++ A+ + M +
Sbjct: 488 TRIRAELTLGAIAKAFRLREVMMLEGISSDTVTYNILIDGLCKTGNLNDAKDLQMKMVHN 547
Query: 336 RCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKM 395
PD +YT ++ A+ + A KFF+ + DG P+ +TY I Y + NL
Sbjct: 548 GLQPDCITYTCLIHAHCERGLLREARKFFKDMISDGLAPSAVTYTVFIHAYCRRGNLYSA 607
Query: 396 MEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILL 453
+ KM G++PN+ + ++ A + A + EM G P++ +L+
Sbjct: 608 YGWFRKMLEEGVEPNEITYNVLIHALCRTGRTQLAYRHFHEMLERGLVPNKYTYTLLI 665
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 87/337 (25%), Positives = 165/337 (48%), Gaps = 9/337 (2%)
Query: 122 MNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQS--SGPRPSALTYQIILKLFVEA 179
M + G PS+V++ L++++ + GR + + M++ SG P+ +T+ +++
Sbjct: 228 MLQLGIEPSIVTYNTLLDSFLKEGRNDKVAMLLKEMETRGSGCLPNDVTHNVVITGLARK 287
Query: 180 NKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQST 239
+EA E +++ + K ++ +I G +KA L M G+ +
Sbjct: 288 GDLEEAAE----MVEGMRLSKKASSFTYNPLITGLLAKGFVKKADDLQLEMENEGIMPTV 343
Query: 240 VTYNSLMS--FETNYKEVSKI-YDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEE 296
VTYN+++ ++ E +++ + +M+ GLQPDV++Y L+N Y KA +EAL +F +
Sbjct: 344 VTYNAMIHGLLQSGQVEAAQVKFVEMRAMGLQPDVITYNSLLNGYCKAGSLKEALLLFGD 403
Query: 297 MLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASD 356
+ AG+ PT YNIL+D + G +++AR + + M C PD+C+YT ++ NA
Sbjct: 404 LRHAGLAPTVLTYNILIDGYCRLGDLEEARRLKEEMVEQGCLPDVCTYTILMKGSHNACS 463
Query: 357 MEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTT 416
+ A +FF + G P+ Y T I+ + + K + + M + GI + +
Sbjct: 464 LAMAREFFDEMLSKGLQPDCFAYNTRIRAELTLGAIAKAFRLREVMMLEGISSDTVTYNI 523
Query: 417 IMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILL 453
++D K + + A +M G PD L+
Sbjct: 524 LIDGLCKTGNLNDAKDLQMKMVHNGLQPDCITYTCLI 560
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 74/290 (25%), Positives = 127/290 (43%), Gaps = 39/290 (13%)
Query: 200 LKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLM-SF--ETNYKEVS 256
+ PD K + ++ + A ++ + A M + G++ S VTYN+L+ SF E +V+
Sbjct: 198 VAPDVKDCNRVLRVLSDAARWDDICAVHAEMLQLGIEPSIVTYNTLLDSFLKEGRNDKVA 257
Query: 257 KIYDQMQR--AGLQPDVVSYALLINAYGKARREEEALAVFE------------------- 295
+ +M+ +G P+ V++ ++I + EEA + E
Sbjct: 258 MLLKEMETRGSGCLPNDVTHNVVITGLARKGDLEEAAEMVEGMRLSKKASSFTYNPLITG 317
Query: 296 ---------------EMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPD 340
EM + G+ PT YN ++ SG V+ A+ F MR PD
Sbjct: 318 LLAKGFVKKADDLQLEMENEGIMPTVVTYNAMIHGLLQSGQVEAAQVKFVEMRAMGLQPD 377
Query: 341 ICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYD 400
+ +Y ++L+ Y A ++ A F L+ G P V+TY LI GY ++ +LE+ + +
Sbjct: 378 VITYNSLLNGYCKAGSLKEALLLFGDLRHAGLAPTVLTYNILIDGYCRLGDLEEARRLKE 437
Query: 401 KMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKN 450
+M G P+ +T +M A ++ EM S G PD A N
Sbjct: 438 EMVEQGCLPDVCTYTILMKGSHNACSLAMAREFFDEMLSKGLQPDCFAYN 487
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 47/232 (20%), Positives = 112/232 (48%), Gaps = 6/232 (2%)
Query: 227 FALMAERGVQQSTVTYNSLM---SFETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGK 283
F MA GV N ++ S + ++ ++ +M + G++P +V+Y L++++ K
Sbjct: 190 FHEMASHGVAPDVKDCNRVLRVLSDAARWDDICAVHAEMLQLGIEPSIVTYNTLLDSFLK 249
Query: 284 ARREEEALAVFEEM--LDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDI 341
R ++ + +EM +G P +N+++ A G +++A + + MR + +
Sbjct: 250 EGRNDKVAMLLKEMETRGSGCLPNDVTHNVVITGLARKGDLEEAAEMVEGMRLSKKASSF 309
Query: 342 CSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDK 401
+Y +++ + ++ A+ ++ +G +P V+TY +I G + +E + +
Sbjct: 310 -TYNPLITGLLAKGFVKKADDLQLEMENEGIMPTVVTYNAMIHGLLQSGQVEAAQVKFVE 368
Query: 402 MRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILL 453
MR G++P+ + ++++ Y K A++ + ++ G P NIL+
Sbjct: 369 MRAMGLQPDVITYNSLLNGYCKAGSLKEALLLFGDLRHAGLAPTVLTYNILI 420
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/224 (24%), Positives = 107/224 (47%), Gaps = 16/224 (7%)
Query: 61 DLVLGTLVRLKQLKKWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLS 120
+L LG + + +L+ EV+ I S + + + +LI K G+ N A+ +
Sbjct: 493 ELTLGAIAKAFRLR------EVMMLEGISS----DTVTYNILIDGLCKTGNLNDAKDLQM 542
Query: 121 FMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEAN 180
M G P +++T L+ A+ G + A F+ M S G PSA+TY + + +
Sbjct: 543 KMVHNGLQPDCITYTCLIHAHCERGLLREARKFFKDMISDGLAPSAVTYTVFIHAYCRRG 602
Query: 181 KFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTV 240
A F +L+E ++P++ ++++I+ + G + A + F M ERG+ +
Sbjct: 603 NLYSAYGWFRKMLEEG---VEPNEITYNVLIHALCRTGRTQLAYRHFHEMLERGLVPNKY 659
Query: 241 TYNSLM---SFETNYKEVSKIYDQMQRAGLQPDVVSYALLINAY 281
TY L+ E N+++ + Y +M + G+ PD +++ L +
Sbjct: 660 TYTLLIDGNCKEGNWEDAMRFYFEMHQNGIHPDYLTHKALFKGF 703
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/236 (22%), Positives = 91/236 (38%), Gaps = 36/236 (15%)
Query: 290 ALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLS 349
L+ F EM GV P K N +L + + D V M + P I +Y T+L
Sbjct: 186 CLSAFHEMASHGVAPDVKDCNRVLRVLSDAARWDDICAVHAEMLQLGIEPSIVTYNTLLD 245
Query: 350 AYVNASDMEGAEKFFRRL--KQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVN-- 405
+++ + + + + G +PN +T+ +I G A+ +LE+ E+ + MR++
Sbjct: 246 SFLKEGRNDKVAMLLKEMETRGSGCLPNDVTHNVVITGLARKGDLEEAAEMVEGMRLSKK 305
Query: 406 --------------------------------GIKPNQTIFTTIMDAYGKNKDFDSAVVW 433
GI P + ++ ++ ++A V
Sbjct: 306 ASSFTYNPLITGLLAKGFVKKADDLQLEMENEGIMPTVVTYNAMIHGLLQSGQVEAAQVK 365
Query: 434 YKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGINGLSISVD 489
+ EM + G PD N LL+ A EA L G+ H P + +I +D
Sbjct: 366 FVEMRAMGLQPDVITYNSLLNGYCKAGSLKEALLLFGDLRHAGLAPTVLTYNILID 421
>gi|42408236|dbj|BAD09393.1| putative PPR protein [Oryza sativa Japonica Group]
gi|125601932|gb|EAZ41257.1| hypothetical protein OsJ_25765 [Oryza sativa Japonica Group]
Length = 798
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 97/390 (24%), Positives = 171/390 (43%), Gaps = 41/390 (10%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
+I+A K +KA VL M K G P+ ++H +L+ Y G+ +A +F+RM G
Sbjct: 244 IISALSKARAMDKAAVVLVRMVKNGAMPNRITHNSLLHGYCSSGKPNDAIGVFKRMCRDG 303
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
P TY ++ + + EA ++F +++ K KP+ + +++ Y G
Sbjct: 304 VEPDVFTYNTLMGYLCKNGRSMEARKIFDSMV---KRGHKPNSATYGTLLHGYATEGSLV 360
Query: 222 KARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSK---IYDQMQRAGLQPDVVSYALLI 278
K L +M G+Q +N L+ T + +V ++ +M+R GL PD V+Y +++
Sbjct: 361 KMHHLLDMMVRNGIQPDHYIFNILIGTYTKHGKVDDAMLLFSKMRRQGLNPDTVTYGIVM 420
Query: 279 NAYGKARREEEALAVFE-----------------------------------EMLDAGVR 303
+A + ++A+A F EM+ G+
Sbjct: 421 DALCMVGKVDDAMAQFGRLISEGLTPDAVVFRNLIHGLCARDKWDKAEELAVEMIGRGIC 480
Query: 304 PTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKF 363
P + +N LL+ GMV +A+ +F M R D+ +Y T++ Y ++ A K
Sbjct: 481 PNNIFFNTLLNHLCKEGMVARAKNIFDLMVRVDVQRDVITYNTLIDGYCLHGKVDEAAKL 540
Query: 364 FRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGK 423
+ DG PN +TY T+I GY K +E ++ +M G+ P ++TI+ +
Sbjct: 541 LEGMVLDGVKPNEVTYNTMINGYCKNGRIEDAFSLFRQMASKGVNPGIVTYSTILQGLFQ 600
Query: 424 NKDFDSAVVWYKEMESCGFPPDQKAKNILL 453
+ +A Y M G D NI+L
Sbjct: 601 ARRTAAAKELYLWMIKSGIKFDIGTYNIIL 630
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 105/363 (28%), Positives = 168/363 (46%), Gaps = 36/363 (9%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAI- 153
N + + ++I + G + A L + + G+ ++ + L++A R A I
Sbjct: 90 NLITYSVVIDCCSRVGHLDLAFAALGRVIRSGWTAEAITFSPLLKALCDKKRTSEAMDIA 149
Query: 154 FRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLL--DEEKSPLKPDQKMFHMMI 211
RRM G P+ +Y I+LK + N+ ++A + T++ D+ + PD ++ +I
Sbjct: 150 LRRMPVLGCTPNVFSYTILLKGLCDENRSQQALHLLHTMMVADDTRGGYPPDVVSYNTVI 209
Query: 212 YMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSKIYDQMQRAGLQPDV 271
G + R+L +T Y ++DQM GL PDV
Sbjct: 210 -----NGLLREGRQL----------------------DTAYH----LFDQMLDQGLSPDV 238
Query: 272 VSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKC 331
V+Y +I+A KAR ++A V M+ G P +N LL + SG + A VFK
Sbjct: 239 VTYNSIISALSKARAMDKAAVVLVRMVKNGAMPNRITHNSLLHGYCSSGKPNDAIGVFKR 298
Query: 332 MRRDRCSPDICSYTTMLSAYV-NASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVN 390
M RD PD+ +Y T++ N ME A K F + + G PN TYGTL+ GYA
Sbjct: 299 MCRDGVEPDVFTYNTLMGYLCKNGRSME-ARKIFDSMVKRGHKPNSATYGTLLHGYATEG 357
Query: 391 NLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKN 450
+L KM + D M NGI+P+ IF ++ Y K+ D A++ + +M G PD
Sbjct: 358 SLVKMHHLLDMMVRNGIQPDHYIFNILIGTYTKHGKVDDAMLLFSKMRRQGLNPDTVTYG 417
Query: 451 ILL 453
I++
Sbjct: 418 IVM 420
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 84/354 (23%), Positives = 161/354 (45%), Gaps = 6/354 (1%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + L+ Y +G K +L M + G P L+ Y + G+ +A +F
Sbjct: 342 NSATYGTLLHGYATEGSLVKMHHLLDMMVRNGIQPDHYIFNILIGTYTKHGKVDDAMLLF 401
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
+M+ G P +TY I++ K +A F L+ E L PD +F +I+
Sbjct: 402 SKMRRQGLNPDTVTYGIVMDALCMVGKVDDAMAQFGRLISEG---LTPDAVVFRNLIHGL 458
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSK---IYDQMQRAGLQPDV 271
++KA +L M RG+ + + +N+L++ V++ I+D M R +Q DV
Sbjct: 459 CARDKWDKAEELAVEMIGRGICPNNIFFNTLLNHLCKEGMVARAKNIFDLMVRVDVQRDV 518
Query: 272 VSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKC 331
++Y LI+ Y + +EA + E M+ GV+P YN +++ + +G ++ A ++F+
Sbjct: 519 ITYNTLIDGYCLHGKVDEAAKLLEGMVLDGVKPNEVTYNTMINGYCKNGRIEDAFSLFRQ 578
Query: 332 MRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNN 391
M +P I +Y+T+L A A++ + + + G ++ TY ++ G + N
Sbjct: 579 MASKGVNPGIVTYSTILQGLFQARRTAAAKELYLWMIKSGIKFDIGTYNIILLGLCQNNC 638
Query: 392 LEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPD 445
+ + I+ + + F ++DA K D A + + + G P+
Sbjct: 639 TDDALRIFQNLYLIDFHLENRTFNIMIDALLKGGRHDEAKDLFASLLARGLVPN 692
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 89/377 (23%), Positives = 167/377 (44%), Gaps = 13/377 (3%)
Query: 88 IQSWWDFNEMDFLMLITAYGKQGDFNKAEKV-LSFMNKKGYAPSVVSHTALMEAYGRGGR 146
I+S W + F L+ A + ++A + L M G P+V S+T L++ R
Sbjct: 118 IRSGWTAEAITFSPLLKALCDKKRTSEAMDIALRRMPVLGCTPNVFSYTILLKGLCDENR 177
Query: 147 YKNAEAIFRRMQSS-----GPRPSALTYQIILK-LFVEANKFKEAEEVFMTLLDEEKSPL 200
+ A + M + G P ++Y ++ L E + A +F +LD+ L
Sbjct: 178 SQQALHLLHTMMVADDTRGGYPPDVVSYNTVINGLLREGRQLDTAYHLFDQMLDQG---L 234
Query: 201 KPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLM-SFETNYK--EVSK 257
PD ++ +I KA +KA + M + G + +T+NSL+ + ++ K +
Sbjct: 235 SPDVVTYNSIISALSKARAMDKAAVVLVRMVKNGAMPNRITHNSLLHGYCSSGKPNDAIG 294
Query: 258 IYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFA 317
++ +M R G++PDV +Y L+ K R EA +F+ M+ G +P Y LL +A
Sbjct: 295 VFKRMCRDGVEPDVFTYNTLMGYLCKNGRSMEARKIFDSMVKRGHKPNSATYGTLLHGYA 354
Query: 318 ISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVI 377
G + + + M R+ PD + ++ Y ++ A F ++++ G P+ +
Sbjct: 355 TEGSLVKMHHLLDMMVRNGIQPDHYIFNILIGTYTKHGKVDDAMLLFSKMRRQGLNPDTV 414
Query: 378 TYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEM 437
TYG ++ V ++ M + ++ G+ P+ +F ++ +D A EM
Sbjct: 415 TYGIVMDALCMVGKVDDAMAQFGRLISEGLTPDAVVFRNLIHGLCARDKWDKAEELAVEM 474
Query: 438 ESCGFPPDQKAKNILLS 454
G P+ N LL+
Sbjct: 475 IGRGICPNNIFFNTLLN 491
Score = 115 bits (287), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 83/358 (23%), Positives = 163/358 (45%), Gaps = 6/358 (1%)
Query: 99 FLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQ 158
F +LI Y K G + A + S M ++G P V++ +M+A G+ +A A F R+
Sbjct: 381 FNILIGTYTKHGKVDDAMLLFSKMRRQGLNPDTVTYGIVMDALCMVGKVDDAMAQFGRLI 440
Query: 159 SSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAG 218
S G P A+ ++ ++ +K+ +AEE+ + ++ + P+ F+ ++ K G
Sbjct: 441 SEGLTPDAVVFRNLIHGLCARDKWDKAEELAVEMIGRG---ICPNNIFFNTLLNHLCKEG 497
Query: 219 GYEKARKLFALMAERGVQQSTVTYNSLM---SFETNYKEVSKIYDQMQRAGLQPDVVSYA 275
+A+ +F LM VQ+ +TYN+L+ E +K+ + M G++P+ V+Y
Sbjct: 498 MVARAKNIFDLMVRVDVQRDVITYNTLIDGYCLHGKVDEAAKLLEGMVLDGVKPNEVTYN 557
Query: 276 LLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRD 335
+IN Y K R E+A ++F +M GV P Y+ +L + A+ ++ M +
Sbjct: 558 TMINGYCKNGRIEDAFSLFRQMASKGVNPGIVTYSTILQGLFQARRTAAAKELYLWMIKS 617
Query: 336 RCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKM 395
DI +Y +L + + A + F+ L F T+ +I K ++
Sbjct: 618 GIKFDIGTYNIILLGLCQNNCTDDALRIFQNLYLIDFHLENRTFNIMIDALLKGGRHDEA 677
Query: 396 MEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILL 453
+++ + G+ PN + +M + + + + +E G + + N L+
Sbjct: 678 KDLFASLLARGLVPNVVTYWLMMKSLIEQGLLEELDDLFLSLEKNGCTANSRMLNALV 735
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/295 (20%), Positives = 115/295 (38%), Gaps = 37/295 (12%)
Query: 190 MTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFE 249
M ++ K P P+ + ++I + G + A + G +T++ L+
Sbjct: 79 MVMVARPKVP--PNLITYSVVIDCCSRVGHLDLAFAALGRVIRSGWTAEAITFSPLLKAL 136
Query: 250 TNYKEVSKIYD----QMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPT 305
+ K S+ D +M G P+V SY +L+ R ++AL + M+ A
Sbjct: 137 CDKKRTSEAMDIALRRMPVLGCTPNVFSYTILLKGLCDENRSQQALHLLHTMMVA----- 191
Query: 306 HKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVN-ASDMEGAEKFF 364
D R + PD+ SY T+++ + ++ A F
Sbjct: 192 -----------------DDTRGGY--------PPDVVSYNTVINGLLREGRQLDTAYHLF 226
Query: 365 RRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKN 424
++ G P+V+TY ++I +K ++K + +M NG PN+ +++ Y +
Sbjct: 227 DQMLDQGLSPDVVTYNSIISALSKARAMDKAAVVLVRMVKNGAMPNRITHNSLLHGYCSS 286
Query: 425 KDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEP 479
+ A+ +K M G PD N L+ EA ++ + ++P
Sbjct: 287 GKPNDAIGVFKRMCRDGVEPDVFTYNTLMGYLCKNGRSMEARKIFDSMVKRGHKP 341
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 54/257 (21%), Positives = 109/257 (42%), Gaps = 12/257 (4%)
Query: 221 EKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSKI--YDQM---QRAGLQPDVVSYA 275
A F + R S V N +S + I + +M R + P++++Y+
Sbjct: 36 HHAHHAFDELLHRPTTSSIVDLNRALSDAARHSPAVAISLFRRMVMVARPKVPPNLITYS 95
Query: 276 LLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTV-FKCMRR 334
++I+ + + A A ++ +G ++ LL A +A + + M
Sbjct: 96 VVIDCCSRVGHLDLAFAALGRVIRSGWTAEAITFSPLLKALCDKKRTSEAMDIALRRMPV 155
Query: 335 DRCSPDICSYTTMLSAYVNASDMEGAEKFFRRL-----KQDGFVPNVITYGTLIKGYAKV 389
C+P++ SYT +L + + + A + + G+ P+V++Y T+I G +
Sbjct: 156 LGCTPNVFSYTILLKGLCDENRSQQALHLLHTMMVADDTRGGYPPDVVSYNTVINGLLRE 215
Query: 390 N-NLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKA 448
L+ ++D+M G+ P+ + +I+ A K + D A V M G P++
Sbjct: 216 GRQLDTAYHLFDQMLDQGLSPDVVTYNSIISALSKARAMDKAAVVLVRMVKNGAMPNRIT 275
Query: 449 KNILLSLAKTADERNEA 465
N LL ++ + N+A
Sbjct: 276 HNSLLHGYCSSGKPNDA 292
>gi|296081998|emb|CBI21003.3| unnamed protein product [Vitis vinifera]
Length = 837
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 87/356 (24%), Positives = 184/356 (51%), Gaps = 7/356 (1%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
L+ Y QG+ + A + + + + G P+ V+++ L+E G + A ++ +M+ +G
Sbjct: 331 LMKGYCAQGNLDSALNLFNKITEDGLFPNKVTYSVLIEGCCNSGNIEKASELYTQMKLNG 390
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
PS +L+ +++A ++EA ++F DE + +++M+ K G +
Sbjct: 391 IPPSVFNVNSLLRGYLKAPLWEEASKLF----DEAVDCGVANIFTYNIMMSWLCKGGKMD 446
Query: 222 KARKLFALMAERGVQQSTVTYNSLM---SFETNYKEVSKIYDQMQRAGLQPDVVSYALLI 278
+A L M +G+ + V+YN ++ + N S ++ M L+P+VV+Y++LI
Sbjct: 447 EACSLLDNMVNQGMVPNVVSYNDMILGHCRKGNMDMASSVFSDMLARDLKPNVVTYSILI 506
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCS 338
+ K E+AL +F++ML + PT +N +++ G + +AR K +
Sbjct: 507 DGNFKKGDSEKALDLFDQMLSLNIAPTDFTFNTIINGLCKVGQMSEARDKLKNFLEEGFI 566
Query: 339 PDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEI 398
P +Y +++ ++ +++ A +R + + G PNV+TY +LI G+ K N ++ ++
Sbjct: 567 PSCMTYNSIVDGFIKEGNIDSALAVYREMCEFGVSPNVVTYTSLINGFCKSNRIDLALKT 626
Query: 399 YDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLS 454
D+MR G++ + T ++ ++D + K +D +SA + E+ G P++ N ++S
Sbjct: 627 RDEMREKGLELDVTAYSALIDGFCKRRDMESAQDLFFELLEVGLSPNRIVYNSMIS 682
Score = 142 bits (358), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 91/356 (25%), Positives = 173/356 (48%), Gaps = 6/356 (1%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
+I + ++G+ + A V S M + P+VV+++ L++ + G + A +F +M S
Sbjct: 470 MILGHCRKGNMDMASSVFSDMLARDLKPNVVTYSILIDGNFKKGDSEKALDLFDQMLSLN 529
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
P+ T+ I+ + + EA + L+E P ++ ++ + K G +
Sbjct: 530 IAPTDFTFNTIINGLCKVGQMSEARDKLKNFLEEG---FIPSCMTYNSIVDGFIKEGNID 586
Query: 222 KARKLFALMAERGVQQSTVTYNSLMS--FETNYKEVS-KIYDQMQRAGLQPDVVSYALLI 278
A ++ M E GV + VTY SL++ ++N +++ K D+M+ GL+ DV +Y+ LI
Sbjct: 587 SALAVYREMCEFGVSPNVVTYTSLINGFCKSNRIDLALKTRDEMREKGLELDVTAYSALI 646
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCS 338
+ + K R E A +F E+L+ G+ P YN ++ F ++ A +K M DR
Sbjct: 647 DGFCKRRDMESAQDLFFELLEVGLSPNRIVYNSMISGFRDLNNMEAALVWYKKMINDRIP 706
Query: 339 PDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEI 398
D+ +YTT++ + + A + + G VP++IT+ L+ G LE +I
Sbjct: 707 CDLGTYTTLIDGLLKEGRLVFASDLYMEMLSKGIVPDIITFHVLVNGLCNKGQLENARKI 766
Query: 399 YDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLS 454
++M + P+ I+ T++ Y + + A + EM G PD +IL++
Sbjct: 767 LEEMDRKNMTPSVLIYNTLIAGYFREGNLKEAFTLHDEMLDRGLVPDDVTYDILIN 822
Score = 132 bits (331), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 107/459 (23%), Positives = 196/459 (42%), Gaps = 37/459 (8%)
Query: 59 PKDLVLGTLVRLKQLKKWNVVSEVLEWLRIQSWWDF-NEMDFLMLITAYGKQGDFNKAEK 117
P +LV+ T + + N+ S + + +I F N++ + +LI G+ KA +
Sbjct: 322 PMNLVVATSLMKGYCAQGNLDSALNLFNKITEDGLFPNKVTYSVLIEGCCNSGNIEKASE 381
Query: 118 VLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFV 177
+ + M G PSV + +L+ Y + ++ A +F G + TY I++
Sbjct: 382 LYTQMKLNGIPPSVFNVNSLLRGYLKAPLWEEASKLFDEAVDCG-VANIFTYNIMMSWLC 440
Query: 178 EANKFKEAEEVFMTLLDEEKSP--------------------------------LKPDQK 205
+ K EA + ++++ P LKP+
Sbjct: 441 KGGKMDEACSLLDNMVNQGMVPNVVSYNDMILGHCRKGNMDMASSVFSDMLARDLKPNVV 500
Query: 206 MFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSKIYDQMQR- 264
+ ++I K G EKA LF M + + T+N++++ ++S+ D+++
Sbjct: 501 TYSILIDGNFKKGDSEKALDLFDQMLSLNIAPTDFTFNTIINGLCKVGQMSEARDKLKNF 560
Query: 265 --AGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMV 322
G P ++Y +++ + K + ALAV+ EM + GV P Y L++ F S +
Sbjct: 561 LEEGFIPSCMTYNSIVDGFIKEGNIDSALAVYREMCEFGVSPNVVTYTSLINGFCKSNRI 620
Query: 323 DQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTL 382
D A MR D+ +Y+ ++ + DME A+ F L + G PN I Y ++
Sbjct: 621 DLALKTRDEMREKGLELDVTAYSALIDGFCKRRDMESAQDLFFELLEVGLSPNRIVYNSM 680
Query: 383 IKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGF 442
I G+ +NN+E + Y KM + I + +TT++D K A Y EM S G
Sbjct: 681 ISGFRDLNNMEAALVWYKKMINDRIPCDLGTYTTLIDGLLKEGRLVFASDLYMEMLSKGI 740
Query: 443 PPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGI 481
PD ++L++ + A ++L + N P +
Sbjct: 741 VPDIITFHVLVNGLCNKGQLENARKILEEMDRKNMTPSV 779
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 72/296 (24%), Positives = 142/296 (47%), Gaps = 6/296 (2%)
Query: 96 EMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFR 155
+ F +I K G ++A L ++G+ PS +++ ++++ + + G +A A++R
Sbjct: 534 DFTFNTIINGLCKVGQMSEARDKLKNFLEEGFIPSCMTYNSIVDGFIKEGNIDSALAVYR 593
Query: 156 RMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYK 215
M G P+ +TY ++ F ++N+ A T + + L+ D + +I +
Sbjct: 594 EMCEFGVSPNVVTYTSLINGFCKSNRIDLA---LKTRDEMREKGLELDVTAYSALIDGFC 650
Query: 216 KAGGYEKARKLFALMAERGVQQSTVTYNSLMSF--ETNYKEVSKI-YDQMQRAGLQPDVV 272
K E A+ LF + E G+ + + YNS++S + N E + + Y +M + D+
Sbjct: 651 KRRDMESAQDLFFELLEVGLSPNRIVYNSMISGFRDLNNMEAALVWYKKMINDRIPCDLG 710
Query: 273 SYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCM 332
+Y LI+ K R A ++ EML G+ P +++L++ G ++ AR + + M
Sbjct: 711 TYTTLIDGLLKEGRLVFASDLYMEMLSKGIVPDIITFHVLVNGLCNKGQLENARKILEEM 770
Query: 333 RRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAK 388
R +P + Y T+++ Y +++ A + G VP+ +TY LI G K
Sbjct: 771 DRKNMTPSVLIYNTLIAGYFREGNLKEAFTLHDEMLDRGLVPDDVTYDILINGKFK 826
Score = 101 bits (252), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 95/392 (24%), Positives = 159/392 (40%), Gaps = 44/392 (11%)
Query: 101 MLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSS 160
+L+TA ++ + + + M +G + ++ A + GR + AE FR +
Sbjct: 190 ILLTALVRRNMIGELRDLYNKMVLRGIYGDHFTVHVMVRACLKEGRVEEAEEYFRETKER 249
Query: 161 GPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKS-PLKPDQKMFHMMIYM------ 213
G + A Y II++ + K + + LL+E K P + F +I
Sbjct: 250 GVKLDAGAYSIIIQAVCK----KPNSNLGLELLEEMKERGWVPSEATFTSVIVACVAQGN 305
Query: 214 -----------------------------YKKAGGYEKARKLFALMAERGVQQSTVTYNS 244
Y G + A LF + E G+ + VTY+
Sbjct: 306 MVEALRLKEEMINCGKPMNLVVATSLMKGYCAQGNLDSALNLFNKITEDGLFPNKVTYSV 365
Query: 245 LM---SFETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAG 301
L+ N ++ S++Y QM+ G+ P V + L+ Y KA EEA +F+E +D G
Sbjct: 366 LIEGCCNSGNIEKASELYTQMKLNGIPPSVFNVNSLLRGYLKAPLWEEASKLFDEAVDCG 425
Query: 302 VRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAE 361
V YNI++ G +D+A ++ M P++ SY M+ + +M+ A
Sbjct: 426 VANIF-TYNIMMSWLCKGGKMDEACSLLDNMVNQGMVPNVVSYNDMILGHCRKGNMDMAS 484
Query: 362 KFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAY 421
F + PNV+TY LI G K + EK ++++D+M I P F TI++
Sbjct: 485 SVFSDMLARDLKPNVVTYSILIDGNFKKGDSEKALDLFDQMLSLNIAPTDFTFNTIINGL 544
Query: 422 GKNKDFDSAVVWYKEMESCGFPPDQKAKNILL 453
K A K GF P N ++
Sbjct: 545 CKVGQMSEARDKLKNFLEEGFIPSCMTYNSIV 576
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 70/317 (22%), Positives = 142/317 (44%), Gaps = 7/317 (2%)
Query: 168 TYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLF 227
+ +L ++ AN+ + A + F ++ ++ P P + + G + R L+
Sbjct: 152 VFNYLLNAYIRANRIENAIDCFNAMICQDVIPWVPYMNILLTALVRRNMIG---ELRDLY 208
Query: 228 ALMAERGVQQSTVTYNSLMSF---ETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKA 284
M RG+ T + ++ E +E + + + + G++ D +Y+++I A K
Sbjct: 209 NKMVLRGIYGDHFTVHVMVRACLKEGRVEEAEEYFRETKERGVKLDAGAYSIIIQAVCKK 268
Query: 285 RREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSY 344
L + EEM + G P+ + ++ A G + +A + + M ++
Sbjct: 269 PNSNLGLELLEEMKERGWVPSEATFTSVIVACVAQGNMVEALRLKEEMINCGKPMNLVVA 328
Query: 345 TTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRV 404
T+++ Y +++ A F ++ +DG PN +TY LI+G N+EK E+Y +M++
Sbjct: 329 TSLMKGYCAQGNLDSALNLFNKITEDGLFPNKVTYSVLIEGCCNSGNIEKASELYTQMKL 388
Query: 405 NGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNE 464
NGI P+ +++ Y K ++ A + E CG + NI++S + +E
Sbjct: 389 NGIPPSVFNVNSLLRGYLKAPLWEEASKLFDEAVDCGV-ANIFTYNIMMSWLCKGGKMDE 447
Query: 465 ANELLGNFNHPNNEPGI 481
A LL N + P +
Sbjct: 448 ACSLLDNMVNQGMVPNV 464
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 87/189 (46%)
Query: 255 VSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLD 314
V + + +R + D + L+NAY +A R E A+ F M+ V P NILL
Sbjct: 134 VDHLINCAKRFDFELDHRVFNYLLNAYIRANRIENAIDCFNAMICQDVIPWVPYMNILLT 193
Query: 315 AFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVP 374
A M+ + R ++ M D + M+ A + +E AE++FR K+ G
Sbjct: 194 ALVRRNMIGELRDLYNKMVLRGIYGDHFTVHVMVRACLKEGRVEEAEEYFRETKERGVKL 253
Query: 375 NVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWY 434
+ Y +I+ K N +E+ ++M+ G P++ FT+++ A + A+
Sbjct: 254 DAGAYSIIIQAVCKKPNSNLGLELLEEMKERGWVPSEATFTSVIVACVAQGNMVEALRLK 313
Query: 435 KEMESCGFP 443
+EM +CG P
Sbjct: 314 EEMINCGKP 322
Score = 65.5 bits (158), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 56/227 (24%), Positives = 95/227 (41%), Gaps = 35/227 (15%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + + LI + K + A K M +KG V +++AL++ + + ++A+ +F
Sbjct: 603 NVVTYTSLINGFCKSNRIDLALKTRDEMREKGLELDVTAYSALIDGFCKRRDMESAQDLF 662
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANK------------------------------FKE 184
+ G P+ + Y ++ F + N KE
Sbjct: 663 FELLEVGLSPNRIVYNSMISGFRDLNNMEAALVWYKKMINDRIPCDLGTYTTLIDGLLKE 722
Query: 185 AEEVFMTLLDEE--KSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTY 242
VF + L E + PD FH+++ G E ARK+ M + + S + Y
Sbjct: 723 GRLVFASDLYMEMLSKGIVPDIITFHVLVNGLCNKGQLENARKILEEMDRKNMTPSVLIY 782
Query: 243 NSLMSF---ETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARR 286
N+L++ E N KE ++D+M GL PD V+Y +LIN K R
Sbjct: 783 NTLIAGYFREGNLKEAFTLHDEMLDRGLVPDDVTYDILINGKFKGDR 829
Score = 42.7 bits (99), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 40/170 (23%), Positives = 73/170 (42%), Gaps = 6/170 (3%)
Query: 305 THKAYNILLDAFAISGMVDQARTVF-----KCMRRDRCSPDICSYTTMLSAYVNASDMEG 359
TH LL+ + +SG D + VF C +R D + +L+AY+ A+ +E
Sbjct: 110 THGHARKLLNRY-VSGDSDPSPVVFVDHLINCAKRFDFELDHRVFNYLLNAYIRANRIEN 168
Query: 360 AEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMD 419
A F + +P V L+ + N + ++ ++Y+KM + GI + ++
Sbjct: 169 AIDCFNAMICQDVIPWVPYMNILLTALVRRNMIGELRDLYNKMVLRGIYGDHFTVHVMVR 228
Query: 420 AYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELL 469
A K + A +++E + G D A +I++ N ELL
Sbjct: 229 ACLKEGRVEEAEEYFRETKERGVKLDAGAYSIIIQAVCKKPNSNLGLELL 278
>gi|222628656|gb|EEE60788.1| hypothetical protein OsJ_14372 [Oryza sativa Japonica Group]
Length = 748
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 95/356 (26%), Positives = 174/356 (48%), Gaps = 7/356 (1%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
LI K + K+E+VL M G P+ ++ +L+ Y G +K + +F+ M SSG
Sbjct: 198 LIDGLCKTKEMVKSERVLEQMVDAGIRPNNKTYNSLIYGYSTAGMWKESVRVFKEMSSSG 257
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
P + + N+ KEA+++F +++ K P KP+ + +++ Y G +
Sbjct: 258 LIPCVVNCNSFIHALCRHNRIKEAKDIFDSMV--LKGP-KPNIISYSTLLHGYAAEGCFA 314
Query: 222 KARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSK---IYDQMQRAGLQPDVVSYALLI 278
L LM +G+ + +N L++ + K I++ MQ G+ PD V++A +I
Sbjct: 315 NMNSLVNLMVSKGIVPNHRFFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVI 374
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISG-MVDQARTVFKCMRRDRC 337
++ + R ++AL F M+D GV P+ Y L+ G +V + + M +D
Sbjct: 375 SSLCRIGRLDDALHKFNHMVDIGVPPSEAVYRCLIQGCCNHGELVKAKELISEMMNKDIP 434
Query: 338 SPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMME 397
P + ++++++ + + + Q G PNV+T+ +L++GY V N+E+
Sbjct: 435 PPGVKYFSSIINNLFKEGRVAEGKDIMDLMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFA 494
Query: 398 IYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILL 453
+ D M GI+PN I+ T++D Y KN D A+ +++M G P NI+L
Sbjct: 495 LLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYNIIL 550
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 95/346 (27%), Positives = 158/346 (45%), Gaps = 13/346 (3%)
Query: 150 AEAIFRRM------QSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPD 203
A +F+RM ++ P+ TY I++ + ++ + A VF LL ++ L PD
Sbjct: 100 AVELFKRMDRWACPHAAADAPTIYTYNILIDCYRRMHRPELALAVFGRLL---RTGLGPD 156
Query: 204 QKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSK---IYD 260
++ +I + K G +KA +LF M E+ V VTYNSL+ KE+ K + +
Sbjct: 157 VCSYNTLIDGFSKEGEVDKAYELFYKMIEQSVSPDVVTYNSLIDGLCKTKEMVKSERVLE 216
Query: 261 QMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISG 320
QM AG++P+ +Y LI Y A +E++ VF+EM +G+ P N + A
Sbjct: 217 QMVDAGIRPNNKTYNSLIYGYSTAGMWKESVRVFKEMSSSGLIPCVVNCNSFIHALCRHN 276
Query: 321 MVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYG 380
+ +A+ +F M P+I SY+T+L Y + G VPN +
Sbjct: 277 RIKEAKDIFDSMVLKGPKPNIISYSTLLHGYAAEGCFANMNSLVNLMVSKGIVPNHRFFN 336
Query: 381 TLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESC 440
LI YA+ ++K M I++ M+ G+ P+ F T++ + + D A+ + M
Sbjct: 337 ILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHKFNHMVDI 396
Query: 441 GFPPDQKAKNILLSLAKTADERNEANELLGN-FNHPNNEPGINGLS 485
G PP + L+ E +A EL+ N PG+ S
Sbjct: 397 GVPPSEAVYRCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFS 442
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 96/378 (25%), Positives = 169/378 (44%), Gaps = 6/378 (1%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N F +LI AY + G +KA + M KG P V+ ++ + R GR +A F
Sbjct: 331 NHRFFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHKF 390
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
M G PS Y+ +++ + +A+E+ +++++ P P K F +I
Sbjct: 391 NHMVDIGVPPSEAVYRCLIQGCCNHGELVKAKELISEMMNKDIPP--PGVKYFSSIINNL 448
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSLM---SFETNYKEVSKIYDQMQRAGLQPDV 271
K G + + + LM + G + + VT+NSLM N +E + D M G++P+
Sbjct: 449 FKEGRVAEGKDIMDLMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNC 508
Query: 272 VSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKC 331
Y L++ Y K R ++AL VF +ML GV+PT YNI+L + A+ +F
Sbjct: 509 YIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYNIILHGLFQARRTTAAKKMFHE 568
Query: 332 MRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNN 391
M + I +Y +L + + A +L ++IT+ +I KV
Sbjct: 569 MIESGTTVSIQTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISAMLKVGR 628
Query: 392 LEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKN- 450
++ E++ + G+ P + ++ K + ++ A + +E G PD + N
Sbjct: 629 RQEAKELFAAISTYGLVPTVHTYNLMISNLIKEESYEEADNLFISVEKSGRAPDSRLLNH 688
Query: 451 ILLSLAKTADERNEANEL 468
I+ L K A+ +N L
Sbjct: 689 IVRMLLKKAEVAKASNYL 706
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 89/384 (23%), Positives = 167/384 (43%), Gaps = 42/384 (10%)
Query: 101 MLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSS 160
+LI Y + A V + + G P V S+ L++ + + G A +F +M
Sbjct: 127 ILIDCYRRMHRPELALAVFGRLLRTGLGPDVCSYNTLIDGFSKEGEVDKAYELFYKMIEQ 186
Query: 161 GPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGY 220
P +TY ++ + + ++E V ++D + ++P+ K ++ +IY Y AG +
Sbjct: 187 SVSPDVVTYNSLIDGLCKTKEMVKSERVLEQMVD---AGIRPNNKTYNSLIYGYSTAGMW 243
Query: 221 EKARKLFALMAERGVQQSTVTYNSLMSFETNY---KEVSKIYDQMQRAGLQPDVVSYALL 277
+++ ++F M+ G+ V NS + + KE I+D M G +P+++SY+ L
Sbjct: 244 KESVRVFKEMSSSGLIPCVVNCNSFIHALCRHNRIKEAKDIFDSMVLKGPKPNIISYSTL 303
Query: 278 INAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRC 337
++ Y ++ M+ G+ P H+ +NIL++A+A GM+D+A +F+ M+
Sbjct: 304 LHGYAAEGCFANMNSLVNLMVSKGIVPNHRFFNILINAYARCGMMDKAMLIFEDMQNKGM 363
Query: 338 SPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAK--------- 388
PD ++ T++S+ ++ A F + G P+ Y LI+G
Sbjct: 364 IPDTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYRCLIQGCCNHGELVKAKE 423
Query: 389 ---------------------VNNLEKM------MEIYDKMRVNGIKPNQTIFTTIMDAY 421
+NNL K +I D M G +PN F ++M+ Y
Sbjct: 424 LISEMMNKDIPPPGVKYFSSIINNLFKEGRVAEGKDIMDLMVQTGQRPNVVTFNSLMEGY 483
Query: 422 GKNKDFDSAVVWYKEMESCGFPPD 445
+ + A M S G P+
Sbjct: 484 CLVGNMEEAFALLDAMASIGIEPN 507
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 90/380 (23%), Positives = 159/380 (41%), Gaps = 9/380 (2%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + + L+ Y +G F +++ M KG P+ L+ AY R G A IF
Sbjct: 296 NIISYSTLLHGYAAEGCFANMNSLVNLMVSKGIVPNHRFFNILINAYARCGMMDKAMLIF 355
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
MQ+ G P +T+ ++ + +A F ++D + P + ++ +I
Sbjct: 356 EDMQNKGMIPDTVTFATVISSLCRIGRLDDALHKFNHMVDIG---VPPSEAVYRCLIQGC 412
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTY-----NSLMSFETNYKEVSKIYDQMQRAGLQP 269
G KA++L + M + + V Y N+L E E I D M + G +P
Sbjct: 413 CNHGELVKAKELISEMMNKDIPPPGVKYFSSIINNLFK-EGRVAEGKDIMDLMVQTGQRP 471
Query: 270 DVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVF 329
+VV++ L+ Y EEA A+ + M G+ P Y L+D + +G +D A TVF
Sbjct: 472 NVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVF 531
Query: 330 KCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKV 389
+ M P Y +L A A+K F + + G ++ TYG ++ G +
Sbjct: 532 RDMLHKGVKPTSVLYNIILHGLFQARRTTAAKKMFHEMIESGTTVSIQTYGVVLGGLCRN 591
Query: 390 NNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAK 449
N ++ + +K+ +K + F ++ A K A + + + G P
Sbjct: 592 NCTDEANMLLEKLFAMNVKFDIITFNIVISAMLKVGRRQEAKELFAAISTYGLVPTVHTY 651
Query: 450 NILLSLAKTADERNEANELL 469
N+++S + EA+ L
Sbjct: 652 NLMISNLIKEESYEEADNLF 671
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/220 (22%), Positives = 99/220 (45%), Gaps = 35/220 (15%)
Query: 86 LRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGG 145
L +Q+ N + F L+ Y G+ +A +L M G P+ + L++ Y + G
Sbjct: 463 LMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNG 522
Query: 146 RYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSP------ 199
R +A +FR M G +P+++ Y IIL +A + A+++F +++ +
Sbjct: 523 RIDDALTVFRDMLHKGVKPTSVLYNIILHGLFQARRTTAAKKMFHEMIESGTTVSIQTYG 582
Query: 200 --------------------------LKPDQKMFHMMIYMYKKAGGYEKARKLFALMAER 233
+K D F+++I K G ++A++LFA ++
Sbjct: 583 VVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISAMLKVGRRQEAKELFAAISTY 642
Query: 234 GVQQSTVTYNSLMSF---ETNYKEVSKIYDQMQRAGLQPD 270
G+ + TYN ++S E +Y+E ++ ++++G PD
Sbjct: 643 GLVPTVHTYNLMISNLIKEESYEEADNLFISVEKSGRAPD 682
>gi|302776656|ref|XP_002971480.1| hypothetical protein SELMODRAFT_95907 [Selaginella moellendorffii]
gi|300160612|gb|EFJ27229.1| hypothetical protein SELMODRAFT_95907 [Selaginella moellendorffii]
Length = 631
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 110/443 (24%), Positives = 199/443 (44%), Gaps = 11/443 (2%)
Query: 44 AVAVLRSERTRGQPLPKDLVLGTLV--RLKQLKKWNVVSEVLEWLRIQSWWDFNEMDFLM 101
A+ + R + G P + TLV K + + ++ E L D N + L+
Sbjct: 144 ALDMFRRLKQEGSCKPNAVSFDTLVIFLCKMSRATDALAVFQEMLGAGLKADVNVCNTLI 203
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
T + G +A ++L M A ++ L+ A+ R G+ + + G
Sbjct: 204 HCTC--RLGMLRQARRLLHHMTAHACARDAFTYGILVNAHCRAGQMHEVASFMELARHDG 261
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
SA+ Y I++ F+ + EA ++F + + +E P D ++++I + K + E
Sbjct: 262 CALSAVNYNFIIQGFIRCGRLAEATQLFESTMTKESVP---DVFTYNLLIALCK-SKQLE 317
Query: 222 KARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSK---IYDQMQRAGLQPDVVSYALLI 278
+A LF + GV TY+ LM +K ++ MQ+AG PD V Y +LI
Sbjct: 318 EALTLFQEAEQGGVVLDVFTYSYLMDAFGKAGRAAKALEVFYNMQKAGCMPDTVVYNVLI 377
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCS 338
+ GK + +EAL + E+M G+ P + YNI++D + G ++A + F M+R + S
Sbjct: 378 SCLGKQGKVDEALELLEDMNRKGIMPDCRTYNIVIDVLSSCGRYEKAYSFFGMMKRRKHS 437
Query: 339 PDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEI 398
PD+ +Y T+L+ + A F ++ + +P++ T+GTLI AK +E +E
Sbjct: 438 PDVVTYNTLLNGLKKLRRTDEACDLFDEMQANKCMPDLTTFGTLIDTLAKAGRMEDALEQ 497
Query: 399 YDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKT 458
++ G PN I+ ++ + ++ D +++M C PD IL+
Sbjct: 498 SARLVKMGHAPNSYIYNALISGFCRSGQVDKGYELFQDMIECSCFPDSITYTILVLGFSR 557
Query: 459 ADERNEANELLGNFNHPNNEPGI 481
+ A ELL + P +
Sbjct: 558 RGHTSMAMELLQEMVREGHTPAL 580
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 101/430 (23%), Positives = 187/430 (43%), Gaps = 14/430 (3%)
Query: 1 MGML-APRKFMQKRRKVEVFKDAADEAGKKNWRRLMNQIEEVGSAVAVLRSERTRGQPLP 59
+GML R+ + +DA N Q+ EV S + + R + +
Sbjct: 209 LGMLRQARRLLHHMTAHACARDAFTYGILVNAHCRAGQMHEVASFMELARHDGCALSAVN 268
Query: 60 KDLVLGTLVRLKQLKKWNVVSE-VLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKV 118
+ ++ +R +L + + E + + + +N L+ A K +A +
Sbjct: 269 YNFIIQGFIRCGRLAEATQLFESTMTKESVPDVFTYN------LLIALCKSKQLEEALTL 322
Query: 119 LSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVE 178
+ G V +++ LM+A+G+ GR A +F MQ +G P + Y +++ +
Sbjct: 323 FQEAEQGGVVLDVFTYSYLMDAFGKAGRAAKALEVFYNMQKAGCMPDTVVYNVLISCLGK 382
Query: 179 ANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQS 238
K EA E+ L D + + PD + ++++I + G YEKA F +M R
Sbjct: 383 QGKVDEALEL---LEDMNRKGIMPDCRTYNIVIDVLSSCGRYEKAYSFFGMMKRRKHSPD 439
Query: 239 TVTYNSLMSFETNYK---EVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFE 295
VTYN+L++ + E ++D+MQ PD+ ++ LI+ KA R E+AL
Sbjct: 440 VVTYNTLLNGLKKLRRTDEACDLFDEMQANKCMPDLTTFGTLIDTLAKAGRMEDALEQSA 499
Query: 296 EMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNAS 355
++ G P YN L+ F SG VD+ +F+ M C PD +YT ++ +
Sbjct: 500 RLVKMGHAPNSYIYNALISGFCRSGQVDKGYELFQDMIECSCFPDSITYTILVLGFSRRG 559
Query: 356 DMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFT 415
A + + + ++G P + TY LI+ + +E ++ +M G P+ ++
Sbjct: 560 HTSMAMELLQEMVREGHTPALATYNVLIRSLSMAGQVEDAYTLFKEMIAKGFNPDMQTYS 619
Query: 416 TIMDAYGKNK 425
+ + NK
Sbjct: 620 ALPNLSTPNK 629
Score = 129 bits (323), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 90/372 (24%), Positives = 162/372 (43%), Gaps = 7/372 (1%)
Query: 101 MLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSS 160
+L+ A+ + G ++ + G A S V++ +++ + R GR A +F +
Sbjct: 236 ILVNAHCRAGQMHEVASFMELARHDGCALSAVNYNFIIQGFIRCGRLAEATQLFESTMTK 295
Query: 161 GPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGY 220
P TY +++ L K K+ EE + E+ + D + ++ + KAG
Sbjct: 296 ESVPDVFTYNLLIAL----CKSKQLEEALTLFQEAEQGGVVLDVFTYSYLMDAFGKAGRA 351
Query: 221 EKARKLFALMAERGVQQSTVTYNSLMSF---ETNYKEVSKIYDQMQRAGLQPDVVSYALL 277
KA ++F M + G TV YN L+S + E ++ + M R G+ PD +Y ++
Sbjct: 352 AKALEVFYNMQKAGCMPDTVVYNVLISCLGKQGKVDEALELLEDMNRKGIMPDCRTYNIV 411
Query: 278 INAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRC 337
I+ R E+A + F M P YN LL+ D+A +F M+ ++C
Sbjct: 412 IDVLSSCGRYEKAYSFFGMMKRRKHSPDVVTYNTLLNGLKKLRRTDEACDLFDEMQANKC 471
Query: 338 SPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMME 397
PD+ ++ T++ A ME A + RL + G PN Y LI G+ + ++K E
Sbjct: 472 MPDLTTFGTLIDTLAKAGRMEDALEQSARLVKMGHAPNSYIYNALISGFCRSGQVDKGYE 531
Query: 398 IYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAK 457
++ M P+ +T ++ + + A+ +EM G P N+L+
Sbjct: 532 LFQDMIECSCFPDSITYTILVLGFSRRGHTSMAMELLQEMVREGHTPALATYNVLIRSLS 591
Query: 458 TADERNEANELL 469
A + +A L
Sbjct: 592 MAGQVEDAYTLF 603
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 86/373 (23%), Positives = 162/373 (43%), Gaps = 12/373 (3%)
Query: 124 KKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG-PRPSALTYQIILKLFVEANKF 182
+KG S V+ T ++A+GR G A + M+ +P + + + E +
Sbjct: 46 QKGVGLSEVTCTECIQAFGRAGDLDAAMGMLDDMRRGNFCQPDTVAFTAAMHWLCEVRRV 105
Query: 183 KEAEEVFMTLLDE--EKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERG-VQQST 239
++A MTL D+ E PD ++ +I Y KAG ++A +F + + G + +
Sbjct: 106 EQA----MTLFDDMRETCDCAPDVVAYNTLIAGYCKAGDGDRALDMFRRLKQEGSCKPNA 161
Query: 240 VTYNSLMSFETNYKEVS---KIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEE 296
V++++L+ F + ++ +M AGL+ DV LI+ + +A +
Sbjct: 162 VSFDTLVIFLCKMSRATDALAVFQEMLGAGLKADVNVCNTLIHCTCRLGMLRQARRLLHH 221
Query: 297 MLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASD 356
M Y IL++A +G + + + + R D C+ +Y ++ ++
Sbjct: 222 MTAHACARDAFTYGILVNAHCRAGQMHEVASFMELARHDGCALSAVNYNFIIQGFIRCGR 281
Query: 357 MEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTT 416
+ A + F VP+V TY LI K LE+ + ++ + G+ + ++
Sbjct: 282 LAEATQLFESTMTKESVPDVFTYNLLI-ALCKSKQLEEALTLFQEAEQGGVVLDVFTYSY 340
Query: 417 IMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPN 476
+MDA+GK A+ + M+ G PD N+L+S + +EA ELL + N
Sbjct: 341 LMDAFGKAGRAAKALEVFYNMQKAGCMPDTVVYNVLISCLGKQGKVDEALELLEDMNRKG 400
Query: 477 NEPGINGLSISVD 489
P +I +D
Sbjct: 401 IMPDCRTYNIVID 413
>gi|222629097|gb|EEE61229.1| hypothetical protein OsJ_15269 [Oryza sativa Japonica Group]
Length = 855
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 96/381 (25%), Positives = 180/381 (47%), Gaps = 24/381 (6%)
Query: 110 GDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTY 169
G F+KA +++ M +KG+ P +++ ++ + + A +F+ M+ G P TY
Sbjct: 267 GKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTY 326
Query: 170 QIILKLFVEANKFKEAEEVFMTLLDEEKSP-LKPDQKMFHMMIYMYKKAGGYEKARKLFA 228
I++ F +A ++A+ +F +E +S P + +I+ Y KA +A +F
Sbjct: 327 TILIDSFCKAGLIEQAQWLF----EEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFH 382
Query: 229 LMAERGVQQSTVTYNSLMSFETNYKEVSK---IYDQM----------------QRAGLQP 269
M + G + + VTY +L+ +SK +Y ++ R L P
Sbjct: 383 RMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAP 442
Query: 270 DVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVF 329
+VV+Y L++ KA + + A + + ML +G P H Y+ L+D F +G +D A+ VF
Sbjct: 443 NVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVF 502
Query: 330 KCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKV 389
M + P + +YT+++ ++ A K ++ +D PNV+TY +I G ++
Sbjct: 503 LQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRI 562
Query: 390 NNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAK 449
EK +++ M G PN +T ++D GK D ++ + +M G P+
Sbjct: 563 GESEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVTY 622
Query: 450 NILLSLAKTADERNEANELLG 470
+L++ A ++A LLG
Sbjct: 623 RVLINHLCAAGLLDKARLLLG 643
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 89/348 (25%), Positives = 157/348 (45%), Gaps = 25/348 (7%)
Query: 99 FLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQ 158
+ +LI ++ K G +A+ + M G +P+VV++TAL+ AY + + A IF RM
Sbjct: 326 YTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMV 385
Query: 159 SSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAG 218
+G RP+ +TY ++ +A +A EV+ L+ S D +
Sbjct: 386 DAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDS---ADSDFY----------- 431
Query: 219 GYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEV---SKIYDQMQRAGLQPDVVSYA 275
F + + VTY +L+ +V ++ D M +G +P+ + Y
Sbjct: 432 --------FPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYD 483
Query: 276 LLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRD 335
LI+ + KA + + A VF +M G P+ Y L+D G +D A V M +D
Sbjct: 484 ALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKD 543
Query: 336 RCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKM 395
C+P++ +YT M+ + E A K +++ G PNV+TY LI G K ++
Sbjct: 544 SCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLS 603
Query: 396 MEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFP 443
++++ +M G PN + +++ D A + EM+ +P
Sbjct: 604 LDLFTQMSRKGCSPNYVTYRVLINHLCAAGLLDKARLLLGEMKQTYWP 651
Score = 128 bits (321), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 94/414 (22%), Positives = 159/414 (38%), Gaps = 102/414 (24%)
Query: 135 TALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLD 194
+ LMEA + A + RM+ + P+ +TY+ +L F++ + + + ++
Sbjct: 115 SGLMEA----SYFDEAMSFLHRMRCNSCIPNVVTYRTLLSGFLKKKQLGWCKRIINMMMT 170
Query: 195 EEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKE 254
E P+ +F+ +++ Y Y A KL M G V YN + ++
Sbjct: 171 EG---CNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMTTCGCPPGYVVYNIFIGSICGQEK 227
Query: 255 VS---------KIY-----------------------------------DQMQRAGLQPD 270
+ KIY +M R G PD
Sbjct: 228 LPSPDLLDLAEKIYGEMLAANCVLNKVNVANFARCLCGVGKFDKAFQLIKEMMRKGFVPD 287
Query: 271 VVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFK 330
+Y+ +I A + E+A +F+EM GV P Y IL+D+F +G+++QA+ +F+
Sbjct: 288 TSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFE 347
Query: 331 CMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVN 390
MR CSP + +YT ++ AY+ A + A F R+ G PN +TYG L+ G K
Sbjct: 348 EMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAG 407
Query: 391 NLEKMMEIY--------------------------------------------------- 399
N+ K E+Y
Sbjct: 408 NISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELL 467
Query: 400 DKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILL 453
D M +G +PN ++ ++D + K DSA + +M CG+ P L+
Sbjct: 468 DAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLI 521
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 98/452 (21%), Positives = 178/452 (39%), Gaps = 57/452 (12%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + + L++ + K+ +++++ M +G P+ +L+ +Y Y A +
Sbjct: 141 NVVTYRTLLSGFLKKKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLL 200
Query: 155 RRMQSSGPRPSALTYQIIL-------------------KLFVEA-------NKFKEA--- 185
RM + G P + Y I + K++ E NK A
Sbjct: 201 NRMTTCGCPPGYVVYNIFIGSICGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFA 260
Query: 186 ---------EEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQ 236
++ F + + + PD + +I A EKA LF M GV
Sbjct: 261 RCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVT 320
Query: 237 QSTVTYNSLM-SFETN--YKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAV 293
TY L+ SF ++ ++++M+ G P VV+Y LI+AY KA++ +A +
Sbjct: 321 PDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDI 380
Query: 294 FEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTV----------------FKCMRRDRC 337
F M+DAG RP Y L+D +G + +A V F C R
Sbjct: 381 FHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTL 440
Query: 338 SPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMME 397
+P++ +Y ++ A ++ A + + G PN I Y LI G+ K ++ E
Sbjct: 441 APNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQE 500
Query: 398 IYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAK 457
++ +M G P+ +T+++D K+ D A+ +M P+ ++
Sbjct: 501 VFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLC 560
Query: 458 TADERNEANELLGNFNHPNNEPGINGLSISVD 489
E +A +LL P + + +D
Sbjct: 561 RIGESEKALKLLSLMEEKGCSPNVVTYTALID 592
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 92/375 (24%), Positives = 160/375 (42%), Gaps = 48/375 (12%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + + L+ K + A ++L M G P+ + + AL++ + + G+ +A+ +F
Sbjct: 443 NVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVF 502
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
+M G PS TY ++ + + A +V +L K P+ + MI
Sbjct: 503 LQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQML---KDSCTPNVVTYTAMIDGL 559
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVS---KIYDQMQRAGLQPDV 271
+ G EKA KL +LM E+G + VTY +L+ ++ ++ QM R G P+
Sbjct: 560 CRIGESEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNY 619
Query: 272 VSYALLINAYGKARREEEA---------------------------------LAVFEEML 298
V+Y +LIN A ++A L + EEM
Sbjct: 620 VTYRVLINHLCAAGLLDKARLLLGEMKQTYWPKYLQGYRCAIQGFSKSFIASLGILEEME 679
Query: 299 DAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCS--PDICSYTTMLSAYVNASD 356
G P Y +L+D F+ +G ++ A + K M S D Y +++ A AS
Sbjct: 680 SYGTVPIAPVYGMLIDCFSKAGRLEIAMELHKEMMEVPSSVKTDNDMYASLIQALCLASQ 739
Query: 357 MEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEI-YDKMRVNGIKPNQT--- 412
+E A + + + + GFVP + + LIKG +V ++ +++ Y G+ + T
Sbjct: 740 VEEAFRLYSEMTRRGFVPELSVFVCLIKGLVEVKKWDEALQLCYGICHEVGLLLSYTTQI 799
Query: 413 ---IFTTIMDAYGKN 424
F I+ YGKN
Sbjct: 800 FLFTFVVIVVGYGKN 814
Score = 78.6 bits (192), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 84/194 (43%), Gaps = 3/194 (1%)
Query: 260 DQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAIS 319
D ++ G +P V+Y L+ A + + V +EM ++G A
Sbjct: 29 DPLKDFGYRPSKVTYNALVQVLSSAGQVDLGFRVQKEMSESGFCMDRFTVGCFAHALCKE 88
Query: 320 GMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITY 379
G A + + R+ D T M+S + AS + A F R++ + +PNV+TY
Sbjct: 89 GRWADALDM---IEREDFKLDTVLCTHMISGLMEASYFDEAMSFLHRMRCNSCIPNVVTY 145
Query: 380 GTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMES 439
TL+ G+ K L I + M G PN ++F +++ +Y KD+ A M +
Sbjct: 146 RTLLSGFLKKKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMTT 205
Query: 440 CGFPPDQKAKNILL 453
CG PP NI +
Sbjct: 206 CGCPPGYVVYNIFI 219
>gi|224130702|ref|XP_002328355.1| predicted protein [Populus trichocarpa]
gi|222838070|gb|EEE76435.1| predicted protein [Populus trichocarpa]
Length = 608
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 105/427 (24%), Positives = 183/427 (42%), Gaps = 70/427 (16%)
Query: 99 FLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQ 158
F LI +G +A ++ + M ++G+ P+V+S+ ++ + G A +F++M+
Sbjct: 161 FNALINGLCNEGKIKEAVELFNEMVRRGHEPNVISYNTIINGLCKTGNTSMAVDVFKKME 220
Query: 159 SSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSP------------------- 199
+G +P +TY I+ + +A E +LD P
Sbjct: 221 QNGCKPDVVTYNTIIDSLCKDRLVNDAMEFLSEMLDRGIPPNVFTYNCMVHGFCILGQLN 280
Query: 200 -------------LKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLM 246
+ PD +++ K G +AR +F M E+GV+ + TYN+LM
Sbjct: 281 EATRLFKEMVGRDVMPDTVTLTILVDGLCKEGMVSEARLVFETMTEKGVEPNISTYNALM 340
Query: 247 ---SFETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKAR------------------ 285
+ E K+++ M R G P V SY +LIN + K+R
Sbjct: 341 DGYCLQRLMNEAKKVFEIMIRQGCAPGVHSYNILINGFCKSRRMDEAKSLLAEMYHKALN 400
Query: 286 -----------------REEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTV 328
R +EAL +F+EM G+ P Y+ILLD F G +D+A +
Sbjct: 401 PDTVTYSTLMQGLCQFGRPKEALNIFKEMCSYGLLPNLVTYSILLDGFCKHGHLDEALKL 460
Query: 329 FKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAK 388
K M+ + P+I +T ++ A +E A++ F +L DG P + TY +IKG K
Sbjct: 461 LKSMQEKKLEPNIVHHTILIEGMFIAGKLEVAKELFSKLFADGIRPTIRTYTVMIKGLLK 520
Query: 389 VNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKA 448
++ +++ KM +G PN + ++ + +N+D +A+ EM F +
Sbjct: 521 EGLSDEAYDLFRKMEDDGFLPNSCSYNVMIQGFLQNQDSSTAIRLIDEMVGKRFSANLST 580
Query: 449 KNILLSL 455
+LL L
Sbjct: 581 FQMLLDL 587
Score = 149 bits (375), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 95/405 (23%), Positives = 179/405 (44%), Gaps = 6/405 (1%)
Query: 101 MLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSS 160
+LI + + A +L M K G P+ + AL+ G+ K A +F M
Sbjct: 128 VLINCLCRLNHVDFAVSILGKMFKLGIHPTASTFNALINGLCNEGKIKEAVELFNEMVRR 187
Query: 161 GPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGY 220
G P+ ++Y I+ + A +VF + E++ KPD ++ +I K
Sbjct: 188 GHEPNVISYNTIINGLCKTGNTSMAVDVFKKM---EQNGCKPDVVTYNTIIDSLCKDRLV 244
Query: 221 EKARKLFALMAERGVQQSTVTYNSLM---SFETNYKEVSKIYDQMQRAGLQPDVVSYALL 277
A + + M +RG+ + TYN ++ E ++++ +M + PD V+ +L
Sbjct: 245 NDAMEFLSEMLDRGIPPNVFTYNCMVHGFCILGQLNEATRLFKEMVGRDVMPDTVTLTIL 304
Query: 278 INAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRC 337
++ K EA VFE M + GV P YN L+D + + ++++A+ VF+ M R C
Sbjct: 305 VDGLCKEGMVSEARLVFETMTEKGVEPNISTYNALMDGYCLQRLMNEAKKVFEIMIRQGC 364
Query: 338 SPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMME 397
+P + SY +++ + + M+ A+ + P+ +TY TL++G + ++ +
Sbjct: 365 APGVHSYNILINGFCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQFGRPKEALN 424
Query: 398 IYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAK 457
I+ +M G+ PN ++ ++D + K+ D A+ K M+ P+ IL+
Sbjct: 425 IFKEMCSYGLLPNLVTYSILLDGFCKHGHLDEALKLLKSMQEKKLEPNIVHHTILIEGMF 484
Query: 458 TADERNEANELLGNFNHPNNEPGINGLSISVDEEDDDDDDDEDDD 502
A + A EL P I ++ + + DE D
Sbjct: 485 IAGKLEVAKELFSKLFADGIRPTIRTYTVMIKGLLKEGLSDEAYD 529
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 97/414 (23%), Positives = 169/414 (40%), Gaps = 76/414 (18%)
Query: 149 NAEAIFRRMQSSGPRPSAL-------------TYQIILKLFVEANKFKEAEEVF------ 189
+A A F RM PRPS Y ++ L + + F V+
Sbjct: 71 DALASFYRMVRMNPRPSVAEFGKFLGSFAKKKQYSTVVSLCNQMDLFGVTHNVYSLNVLI 130
Query: 190 ------------MTLLDEE-KSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQ 236
+++L + K + P F+ +I G ++A +LF M RG +
Sbjct: 131 NCLCRLNHVDFAVSILGKMFKLGIHPTASTFNALINGLCNEGKIKEAVELFNEMVRRGHE 190
Query: 237 QSTVTYNSL---MSFETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAV 293
+ ++YN++ + N ++ +M++ G +PDVV+Y +I++ K R +A+
Sbjct: 191 PNVISYNTIINGLCKTGNTSMAVDVFKKMEQNGCKPDVVTYNTIIDSLCKDRLVNDAMEF 250
Query: 294 FEEMLDAGVRPTHKAYNILLDAFAI----------------------------------- 318
EMLD G+ P YN ++ F I
Sbjct: 251 LSEMLDRGIPPNVFTYNCMVHGFCILGQLNEATRLFKEMVGRDVMPDTVTLTILVDGLCK 310
Query: 319 SGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVIT 378
GMV +AR VF+ M P+I +Y ++ Y M A+K F + + G P V +
Sbjct: 311 EGMVSEARLVFETMTEKGVEPNISTYNALMDGYCLQRLMNEAKKVFEIMIRQGCAPGVHS 370
Query: 379 YGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDA---YGKNKDFDSAVVWYK 435
Y LI G+ K +++ + +M + P+ ++T+M +G+ K+ A+ +K
Sbjct: 371 YNILINGFCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQFGRPKE---ALNIFK 427
Query: 436 EMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGINGLSISVD 489
EM S G P+ +ILL +EA +LL + EP I +I ++
Sbjct: 428 EMCSYGLLPNLVTYSILLDGFCKHGHLDEALKLLKSMQEKKLEPNIVHHTILIE 481
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/237 (24%), Positives = 97/237 (40%), Gaps = 35/237 (14%)
Query: 288 EEALAVFEEMLDAGVRP---------------------------------THKAY--NIL 312
++ALA F M+ RP TH Y N+L
Sbjct: 70 DDALASFYRMVRMNPRPSVAEFGKFLGSFAKKKQYSTVVSLCNQMDLFGVTHNVYSLNVL 129
Query: 313 LDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGF 372
++ VD A ++ M + P ++ +++ N ++ A + F + + G
Sbjct: 130 INCLCRLNHVDFAVSILGKMFKLGIHPTASTFNALINGLCNEGKIKEAVELFNEMVRRGH 189
Query: 373 VPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVV 432
PNVI+Y T+I G K N ++++ KM NG KP+ + TI+D+ K++ + A+
Sbjct: 190 EPNVISYNTIINGLCKTGNTSMAVDVFKKMEQNGCKPDVVTYNTIIDSLCKDRLVNDAME 249
Query: 433 WYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGINGLSISVD 489
+ EM G PP+ N ++ + NEA L + P L+I VD
Sbjct: 250 FLSEMLDRGIPPNVFTYNCMVHGFCILGQLNEATRLFKEMVGRDVMPDTVTLTILVD 306
>gi|297607630|ref|NP_001060305.2| Os07g0621100 [Oryza sativa Japonica Group]
gi|255677977|dbj|BAF22219.2| Os07g0621100 [Oryza sativa Japonica Group]
Length = 734
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 107/393 (27%), Positives = 186/393 (47%), Gaps = 28/393 (7%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
LI + K G KA V+ M ++G P+VV++ L+ + G K A + ++M G
Sbjct: 226 LIDSLCKVGKAKKAHGVMDMMVRRGLEPNVVTYNVLINCMCKEGSVKEAIGVLKKMSEKG 285
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDE---EKSPLKPDQKMFHMMIYMYKKAG 218
P +TY ++K + + EA M LL+E K+ +KP+ F+ +I G
Sbjct: 286 VAPDVVTYNTLIKGLSDVLEMDEA----MWLLEEMVRGKNIVKPNVVTFNSVIQGLCDIG 341
Query: 219 GYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSK---IYDQMQRAGLQPDVVSYA 275
+A ++ A+M E G + VTYN L+ +V K + D+M GL+PD +Y+
Sbjct: 342 RMRQAFQVRAMMEETGCMVNLVTYNLLIGGLLRVHKVRKAMELMDEMTSLGLEPDSFTYS 401
Query: 276 LLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRD 335
+LI + K + + A + M D G+ P Y LL A GM+++AR +F M D
Sbjct: 402 ILIKGFCKMWQVDRAEDLLSTMRDRGIEPELFHYIPLLVAMCEQGMMERARNLFNEM--D 459
Query: 336 RCSP-DICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEK 394
P D+ +Y+TM+ A D++ A++ + + +G P+ +TY +I +AK ++E
Sbjct: 460 NNFPLDVVAYSTMIHGACKAGDLKTAKELLKSIVDEGLTPDAVTYSIVINMFAKSGDMEA 519
Query: 395 MMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLS 454
+ +M +G P+ +F +++ Y + + + +EM + D K I+ +
Sbjct: 520 ANGVLKQMTASGFLPDVAVFDSLIQGYSTKGEINKVLELIREMITKNIALDSK---IIST 576
Query: 455 LAKTADERNEANELL------------GNFNHP 475
L+ + NE LL GN N P
Sbjct: 577 LSTSLVASNEGKALLQSLPDFSAEISKGNINSP 609
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 90/352 (25%), Positives = 177/352 (50%), Gaps = 11/352 (3%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYA---PSVVSHTALMEAYGRGGRYKNAEAIFRRMQ 158
++TA ++G ++A +L M+ + + P+ VS+T LM A A + R M+
Sbjct: 83 VLTALCRRGHHDRAGALLRAMSLEPHPACRPNAVSYTVLMRALCADRLADQAVGLLRSMR 142
Query: 159 SSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAG 218
S+G R +TY +++ +A + +A E+ + + S ++P+ ++ ++ Y K+G
Sbjct: 143 SAGVRADVVTYGTLIRGLCDAAEVDKAVELMGEMCE---SGIEPNVVVYSSLLQGYCKSG 199
Query: 219 GYEKARKLFALMAERGVQQSTVTYNSLMSFETNY---KEVSKIYDQMQRAGLQPDVVSYA 275
+E K+F M+E+G++ V Y L+ K+ + D M R GL+P+VV+Y
Sbjct: 200 RWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAKKAHGVMDMMVRRGLEPNVVTYN 259
Query: 276 LLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRD 335
+LIN K +EA+ V ++M + GV P YN L+ + +D+A + + M R
Sbjct: 260 VLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLIKGLSDVLEMDEAMWLLEEMVRG 319
Query: 336 R--CSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLE 393
+ P++ ++ +++ + M A + +++ G + N++TY LI G +V+ +
Sbjct: 320 KNIVKPNVVTFNSVIQGLCDIGRMRQAFQVRAMMEETGCMVNLVTYNLLIGGLLRVHKVR 379
Query: 394 KMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPD 445
K ME+ D+M G++P+ ++ ++ + K D A M G P+
Sbjct: 380 KAMELMDEMTSLGLEPDSFTYSILIKGFCKMWQVDRAEDLLSTMRDRGIEPE 431
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 86/362 (23%), Positives = 152/362 (41%), Gaps = 49/362 (13%)
Query: 129 PSV---VSHTALMEAYGRGGRYKNAEAIFRRMQ---SSGPRPSALTYQIILKLFVEANKF 182
PSV VS+ ++ A R G + A A+ R M RP+A++Y ++++ A++
Sbjct: 72 PSVRDAVSYNTVLTALCRRGHHDRAGALLRAMSLEPHPACRPNAVSYTVLMRALC-ADRL 130
Query: 183 KEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTY 242
+ +A L M GV+ VTY
Sbjct: 131 AD-------------------------------------QAVGLLRSMRSAGVRADVVTY 153
Query: 243 NSLMSFETNYKEVSK---IYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLD 299
+L+ + EV K + +M +G++P+VV Y+ L+ Y K+ R E+ VF EM +
Sbjct: 154 GTLIRGLCDAAEVDKAVELMGEMCESGIEPNVVVYSSLLQGYCKSGRWEDVGKVFVEMSE 213
Query: 300 AGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEG 359
G+ P Y L+D+ G +A V M R P++ +Y +++ ++
Sbjct: 214 KGIEPDVVMYTGLIDSLCKVGKAKKAHGVMDMMVRRGLEPNVVTYNVLINCMCKEGSVKE 273
Query: 360 AEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMR--VNGIKPNQTIFTTI 417
A +++ + G P+V+TY TLIKG + V +++ M + ++M N +KPN F ++
Sbjct: 274 AIGVLKKMSEKGVAPDVVTYNTLIKGLSDVLEMDEAMWLLEEMVRGKNIVKPNVVTFNSV 333
Query: 418 MDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNN 477
+ A ME G + N+L+ + +A EL+
Sbjct: 334 IQGLCDIGRMRQAFQVRAMMEETGCMVNLVTYNLLIGGLLRVHKVRKAMELMDEMTSLGL 393
Query: 478 EP 479
EP
Sbjct: 394 EP 395
>gi|410110081|gb|AFV61120.1| pentatricopeptide repeat-containing protein 123, partial [Lantana
camara]
Length = 381
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 100/374 (26%), Positives = 183/374 (48%), Gaps = 37/374 (9%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
LI K D++KA + S + + G+ P +V++ A++ +G+ ++ A ++ M+++G
Sbjct: 10 LIELSRKLCDYSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMKTAG 69
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
P+ +Y +L ++VE KF EA VF + + E K L D ++MI +Y + G +
Sbjct: 70 VXPNTTSYSTLLTMYVENKKFLEALSVF-SEMREIKCLL--DLTTCNIMIDVYGQLGMAK 126
Query: 222 KARKLFALMAERGVQQSTVTYNSLMSFETN---YKEVSKIYDQMQRAGLQPDVVSYALLI 278
+A KLF M + G++ + V+YN+L+ + + E ++ MQR ++ +VV+Y +I
Sbjct: 127 EADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMI 186
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCS 338
YGK E+A + +EM G+ P Y+ ++ + G +D+A +F+ +R
Sbjct: 187 MIYGKTLEHEKANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVE 246
Query: 339 PDICSYTTMLSAY-------------------------------VNASDMEGAEKFFRRL 367
D + TM+ AY A +E A FR+
Sbjct: 247 IDQILFQTMIVAYERAGLVAHAKRLLHELKRPDNIPRDTAIHILAGAGRIEEATYVFRQA 306
Query: 368 KQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDF 427
G V ++ + +I +K ++E++DKMR G P+ + T +++AYGK ++F
Sbjct: 307 IDAGEVKDITVFERMIHLLSKYKKYSNVVEVFDKMRGLGYFPDSNVITVVLNAYGKLQEF 366
Query: 428 DSAVVWYKEMESCG 441
D A Y EM+ G
Sbjct: 367 DKANDVYMEMQEVG 380
Score = 129 bits (323), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 77/280 (27%), Positives = 136/280 (48%), Gaps = 3/280 (1%)
Query: 203 DQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSF---ETNYKEVSKIY 259
D ++ +I + +K Y KA +F+ + G V YN++++ ++E +
Sbjct: 3 DLVLYSNLIELSRKLCDYSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLI 62
Query: 260 DQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAIS 319
+M+ AG+ P+ SY+ L+ Y + ++ EAL+VF EM + NI++D +
Sbjct: 63 SEMKTAGVXPNTTSYSTLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQL 122
Query: 320 GMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITY 379
GM +A +F MR+ P++ SY T+L Y +A A FR +++ NV+TY
Sbjct: 123 GMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTY 182
Query: 380 GTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMES 439
++I Y K EK + +M+ GI+PN ++TI+ +GK D A + ++++ S
Sbjct: 183 NSMIMIYGKTLEHEKANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRS 242
Query: 440 CGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEP 479
G DQ ++ + A A LL P+N P
Sbjct: 243 SGVEIDQILFQTMIVAYERAGLVAHAKRLLHELKRPDNIP 282
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/244 (23%), Positives = 115/244 (47%), Gaps = 6/244 (2%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + + L+ YG F +A + M +K +VV++ +++ YG+ ++ A +
Sbjct: 143 NVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMIMIYGKTLEHEKANNLI 202
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
+ MQS G P+++TY I+ ++ + K A +F L S ++ DQ +F MI Y
Sbjct: 203 QEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKL---RSSGVEIDQILFQTMIVAY 259
Query: 215 KKAGGYEKARKLFA-LMAERGVQQSTVTYNSLMSFETNYKEVSKIYDQMQRAGLQPDVVS 273
++AG A++L L + + T + +++ +E + ++ Q AG D+
Sbjct: 260 ERAGLVAHAKRLLHELKRPDNIPRDTAIH--ILAGAGRIEEATYVFRQAIDAGEVKDITV 317
Query: 274 YALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMR 333
+ +I+ K ++ + VF++M G P ++L+A+ D+A V+ M+
Sbjct: 318 FERMIHLLSKYKKYSNVVEVFDKMRGLGYFPDSNVITVVLNAYGKLQEFDKANDVYMEMQ 377
Query: 334 RDRC 337
C
Sbjct: 378 EVGC 381
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 35/142 (24%), Positives = 63/142 (44%)
Query: 340 DICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIY 399
D+ Y+ ++ D A F RLK+ GF P+++ Y +I + K + +
Sbjct: 3 DLVLYSNLIELSRKLCDYSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLI 62
Query: 400 DKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTA 459
+M+ G+ PN T ++T++ Y +NK F A+ + EM D NI++ +
Sbjct: 63 SEMKTAGVXPNTTSYSTLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQL 122
Query: 460 DERNEANELLGNFNHPNNEPGI 481
EA++L EP +
Sbjct: 123 GMAKEADKLFWGMRKMGIEPNV 144
>gi|297832604|ref|XP_002884184.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297330024|gb|EFH60443.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 829
Score = 152 bits (385), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 109/446 (24%), Positives = 205/446 (45%), Gaps = 48/446 (10%)
Query: 51 ERTRGQPLPKDLVLGTLVR-LKQLKKWNVVSEVLEWLRIQSWWDFNEMD---FLMLITAY 106
+ + + L DLV +LV+ L W + EWL + S ++D +L+
Sbjct: 135 DSVKSELLTTDLV--SLVKGLDDSGHWERAVFLFEWLVLSSNSGALKLDHHVIEILVRIL 192
Query: 107 GKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSA 166
G++ ++ A K+L + + Y V ++T ++ AY R G+Y+ A +F RM+ GP P+
Sbjct: 193 GRESQYSVAAKLLDKIPLQDYMLDVRAYTTILHAYSRTGKYEKAINLFERMKEMGPSPTL 252
Query: 167 LTYQIILKLFVEANK------------------------------------FKEAEEVFM 190
+TY +IL +F + + +EA++ F
Sbjct: 253 VTYNVILDVFGKMGRSWRKILGVLEEMRSKGLKFDEFTCSTVLSACAREGLLREAKDFFA 312
Query: 191 TLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFET 250
L + +P ++ ++ ++ KAG Y +A + M E +VTYN L++
Sbjct: 313 EL---KSCGYEPGTVTYNALLQVFGKAGVYTEALSVLKEMEENNCPADSVTYNELVAAYA 369
Query: 251 N---YKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHK 307
KE + + + M + G+ P+ ++Y +I+AYGKA +E+EAL +F M +AG P
Sbjct: 370 RAGFSKEAAVVIEMMTQKGVMPNAITYTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTC 429
Query: 308 AYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRL 367
YN +L ++ + M+ + C P+ ++ T+L+ N + + FR +
Sbjct: 430 TYNAVLSMLGKKSRSNEMIKMLCDMKSNGCFPNRATWNTILALCGNKGMDKFVNRVFREM 489
Query: 368 KQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDF 427
K GF P+ T+ TLI Y + + ++Y +M G T + +++A + D+
Sbjct: 490 KSCGFEPDRDTFNTLISAYGRCGSEVDASKMYGEMTRAGFNACVTTYNALLNALARKGDW 549
Query: 428 DSAVVWYKEMESCGFPPDQKAKNILL 453
S +M+S GF P + + +++L
Sbjct: 550 RSGENVISDMKSKGFKPTETSYSLML 575
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 105/447 (23%), Positives = 190/447 (42%), Gaps = 42/447 (9%)
Query: 71 KQLKKWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPS 130
K + W + VLE +R + F+E +++A ++G +A+ + + GY P
Sbjct: 264 KMGRSWRKILGVLEEMRSKGL-KFDEFTCSTVLSACAREGLLREAKDFFAELKSCGYEPG 322
Query: 131 VVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFM 190
V++ AL++ +G+ G Y A ++ + M+ + ++TY ++ + A KEA V
Sbjct: 323 TVTYNALLQVFGKAGVYTEALSVLKEMEENNCPADSVTYNELVAAYARAGFSKEAAVVIE 382
Query: 191 TLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSF-- 248
+ + + P+ + +I Y KAG ++A KLF M E G +T TYN+++S
Sbjct: 383 MM---TQKGVMPNAITYTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSMLG 439
Query: 249 ---------------ETNY---------------------KEVSKIYDQMQRAGLQPDVV 272
++N K V++++ +M+ G +PD
Sbjct: 440 KKSRSNEMIKMLCDMKSNGCFPNRATWNTILALCGNKGMDKFVNRVFREMKSCGFEPDRD 499
Query: 273 SYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCM 332
++ LI+AYG+ E +A ++ EM AG YN LL+A A G V M
Sbjct: 500 TFNTLISAYGRCGSEVDASKMYGEMTRAGFNACVTTYNALLNALARKGDWRSGENVISDM 559
Query: 333 RRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNL 392
+ P SY+ ML Y + G E+ + + P+ + TL+ K L
Sbjct: 560 KSKGFKPTETSYSLMLQCYAKGGNYLGIERIEEGINEGQIFPSWMLLRTLLLANFKCRAL 619
Query: 393 EKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNIL 452
+ + +G KP+ IF +++ + +N +D A + + G PD N L
Sbjct: 620 AGSERAFTLFKKHGYKPDMVIFNSMLSIFTRNNMYDQAEGILQSIHEDGLNPDLVTYNSL 679
Query: 453 LSLAKTADERNEANELLGNFNHPNNEP 479
+ + E +A E+L +P
Sbjct: 680 MDMYVRRGECWKAEEILKTLEKSQLKP 706
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 85/343 (24%), Positives = 154/343 (44%), Gaps = 48/343 (13%)
Query: 170 QIILKLFVEANKFKEAEEVFMTLLDEEKSPLKP---DQKMFHMMIYMYKKAGGYEKARKL 226
+I++++ +++ A + LLD K PL+ D + + +++ Y + G YEKA L
Sbjct: 186 EILVRILGRESQYSVAAK----LLD--KIPLQDYMLDVRAYTTILHAYSRTGKYEKAINL 239
Query: 227 FALMAERGVQQSTVTYNSLM----SFETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYG 282
F M E G + VTYN ++ +++++ + ++M+ GL+ D + + +++A
Sbjct: 240 FERMKEMGPSPTLVTYNVILDVFGKMGRSWRKILGVLEEMRSKGLKFDEFTCSTVLSACA 299
Query: 283 KARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDIC 342
+ EA F E+ G P YN LL F +G+ +A +V K M + C D
Sbjct: 300 REGLLREAKDFFAELKSCGYEPGTVTYNALLQVFGKAGVYTEALSVLKEMEENNCPADSV 359
Query: 343 SYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKM 402
+Y +++AY A + A + Q G +PN ITY T+I Y K ++ ++++ M
Sbjct: 360 TYNELVAAYARAGFSKEAAVVIEMMTQKGVMPNAITYTTVIDAYGKAGKEDEALKLFYSM 419
Query: 403 RVNGIKPNQTIFTTIMDAYGK----------------NKDFDSAVVW------------- 433
+ G PN + ++ GK N F + W
Sbjct: 420 KEAGCVPNTCTYNAVLSMLGKKSRSNEMIKMLCDMKSNGCFPNRATWNTILALCGNKGMD 479
Query: 434 ------YKEMESCGFPPDQKAKNILLSLAKTADERNEANELLG 470
++EM+SCGF PD+ N L+S +A+++ G
Sbjct: 480 KFVNRVFREMKSCGFEPDRDTFNTLISAYGRCGSEVDASKMYG 522
Score = 113 bits (283), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 78/364 (21%), Positives = 154/364 (42%), Gaps = 52/364 (14%)
Query: 99 FLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQ 158
F LI+AYG+ G A K+ M + G+ V ++ AL+ A R G +++ E + M+
Sbjct: 501 FNTLISAYGRCGSEVDASKMYGEMTRAGFNACVTTYNALLNALARKGDWRSGENVISDMK 560
Query: 159 SSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEE---KSPLKPDQKMFHMMIYMYK 215
S G +P+ +Y ++L+ + + + E + EE + + P + ++
Sbjct: 561 SKGFKPTETSYSLMLQCYAKGGNYLGIERI------EEGINEGQIFPSWMLLRTLLLANF 614
Query: 216 KAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETN---YKEVSKIYDQMQRAGLQPDVV 272
K + + F L + G + V +NS++S T Y + I + GL PD+V
Sbjct: 615 KCRALAGSERAFTLFKKHGYKPDMVIFNSMLSIFTRNNMYDQAEGILQSIHEDGLNPDLV 674
Query: 273 SYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCM 332
+ YN L+D + G +A + K +
Sbjct: 675 T-----------------------------------YNSLMDMYVRRGECWKAEEILKTL 699
Query: 333 RRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNL 392
+ + PD+ SY T++ + M+ A + + + G P + TY T + GY +
Sbjct: 700 EKSQLKPDLVSYNTVIKGFCRKGLMQEAVRMLSEMTERGIRPCIFTYNTFVSGYTAMGMY 759
Query: 393 EKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPP---DQKAK 449
++ ++ + M N +PN+ F ++D Y + + A+ + ++++ F P DQ +
Sbjct: 760 GEIEDVIECMAKNDCRPNELTFKMVVDGYCRAGKYSEAMDFVSKIKT--FDPCFDDQSIQ 817
Query: 450 NILL 453
+ L
Sbjct: 818 RLAL 821
>gi|255570422|ref|XP_002526170.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223534547|gb|EEF36246.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 504
Score = 152 bits (385), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 104/388 (26%), Positives = 179/388 (46%), Gaps = 6/388 (1%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + ++I + K G K K+ M G P+V+ +++L+ R G+ + A +F
Sbjct: 78 NFFTYGLVIDSLCKDGLAIKGLKMFREMINMGICPNVIVYSSLINGLCRVGKLREAVNLF 137
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
M S G + + +TY ++ +KEA F ++ E + PD F +I
Sbjct: 138 DEMVSQGIKANVITYNSLIHASCRFGLWKEATRTFSQMVGE---GILPDVVTFTTLIDHL 194
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSLM---SFETNYKEVSKIYDQMQRAGLQPDV 271
K G ++A K+F LM ++G + VTYNSL+ ++++ M G++ DV
Sbjct: 195 SKKGKVQEAYKIFELMIKQGEAPNIVTYNSLLNGLCLHHQMDHAVRLFEVMVERGIKIDV 254
Query: 272 VSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKC 331
+SY LIN Y + + EEA+ +F +M + P+ Y ILL A +G + A+ +F
Sbjct: 255 ISYNTLINGYCTSGKTEEAMTLFRKMQYEELTPSITTYTILLKALYQNGRIRTAKELFNN 314
Query: 332 MRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNN 391
M+ SP + +YT +L +E A FR LK + P++ Y LI G +
Sbjct: 315 MQICGQSPSLDTYTVLLDGLCKNGCIEEAIDVFRSLKSIKYKPSIRIYSILIGGMFQARR 374
Query: 392 LEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNI 451
E MEI+D++ G+ PN + +++ K A + +ME G D+ + N
Sbjct: 375 WESAMEIFDEIPTVGLVPNIVTYNIMINGLCKEGKLLEAERLFVQMEESGCEQDEISFNF 434
Query: 452 LLSLAKTADERNEANELLGNFNHPNNEP 479
++ ++ +A E L N P
Sbjct: 435 IIRGFLQENQVQKAMEFLKRMREKNFSP 462
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 92/365 (25%), Positives = 168/365 (46%), Gaps = 35/365 (9%)
Query: 124 KKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFK 183
K GY P++V+ + L++ G+ +A +F +M SG + L Y ++ + + +
Sbjct: 2 KSGYQPNLVTVSTLVKGMCFEGKVMDALELFDKMTRSGFQGDILLYGYLINALRKTRQAR 61
Query: 184 EAEEVFMTLLDEEKS-----------PLKPD------QKMFHMMIYM------------- 213
A E+ +L E S L D KMF MI M
Sbjct: 62 RAVELHRRMLSEICSGNFFTYGLVIDSLCKDGLAIKGLKMFREMINMGICPNVIVYSSLI 121
Query: 214 --YKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNY---KEVSKIYDQMQRAGLQ 268
+ G +A LF M +G++ + +TYNSL+ + KE ++ + QM G+
Sbjct: 122 NGLCRVGKLREAVNLFDEMVSQGIKANVITYNSLIHASCRFGLWKEATRTFSQMVGEGIL 181
Query: 269 PDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTV 328
PDVV++ LI+ K + +EA +FE M+ G P YN LL+ + +D A +
Sbjct: 182 PDVVTFTTLIDHLSKKGKVQEAYKIFELMIKQGEAPNIVTYNSLLNGLCLHHQMDHAVRL 241
Query: 329 FKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAK 388
F+ M D+ SY T+++ Y + E A FR+++ + P++ TY L+K +
Sbjct: 242 FEVMVERGIKIDVISYNTLINGYCTSGKTEEAMTLFRKMQYEELTPSITTYTILLKALYQ 301
Query: 389 VNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKA 448
+ E+++ M++ G P+ +T ++D KN + A+ ++ ++S + P +
Sbjct: 302 NGRIRTAKELFNNMQICGQSPSLDTYTVLLDGLCKNGCIEEAIDVFRSLKSIKYKPSIRI 361
Query: 449 KNILL 453
+IL+
Sbjct: 362 YSILI 366
Score = 47.0 bits (110), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 36/156 (23%), Positives = 65/156 (41%)
Query: 298 LDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDM 357
+ +G +P + L+ G V A +F M R DI Y +++A
Sbjct: 1 MKSGYQPNLVTVSTLVKGMCFEGKVMDALELFDKMTRSGFQGDILLYGYLINALRKTRQA 60
Query: 358 EGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTI 417
A + RR+ + N TYG +I K K ++++ +M GI PN +++++
Sbjct: 61 RRAVELHRRMLSEICSGNFFTYGLVIDSLCKDGLAIKGLKMFREMINMGICPNVIVYSSL 120
Query: 418 MDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILL 453
++ + AV + EM S G + N L+
Sbjct: 121 INGLCRVGKLREAVNLFDEMVSQGIKANVITYNSLI 156
>gi|224107129|ref|XP_002314384.1| predicted protein [Populus trichocarpa]
gi|222863424|gb|EEF00555.1| predicted protein [Populus trichocarpa]
Length = 764
Score = 152 bits (385), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 114/439 (25%), Positives = 204/439 (46%), Gaps = 42/439 (9%)
Query: 63 VLGTLVRLKQLKKWNVVSEVLEWLR-IQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSF 121
++G L + +L + + E +E R + + +N M I YG G F++A +L
Sbjct: 172 MMGVLCKANRLDEAVEIFEQMEQNRQVPCAYAYNTM-----IMGYGSAGKFDEAYSLLER 226
Query: 122 MNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANK 181
KG PSVV++ ++ G+ G+ A IF M+ P+ TY II+ + +A
Sbjct: 227 QRAKGCIPSVVAYNCILTCLGKKGKTDKALRIFEEMKRDA-MPNLPTYNIIIGMLCKAGN 285
Query: 182 FKEAEEVFMTL------------------------LDEEKSPLK--------PDQKMFHM 209
+ A +V + LDE S + PD F
Sbjct: 286 VEAAFKVRDAMKEAGLFPNVRTINIMIDRLCKAQKLDEACSIFEGMDYKVCSPDGATFCS 345
Query: 210 MIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMS--FETNYKE-VSKIYDQMQRAG 266
+I K G + A +++ M + + V Y SL+ F+ + KE K+Y +M R+G
Sbjct: 346 LIDGLGKQGRVDDAYRIYERMLDADQIPNVVVYTSLIRNFFKCDRKEDGHKMYKEMMRSG 405
Query: 267 LQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQAR 326
PD++ ++ KA E+ A+FEE+ G P ++Y+IL+ + +G +
Sbjct: 406 CSPDLMLLNTYMDCVFKAGETEKGRALFEEIKARGFLPDTRSYSILIHSLVKAGFARETY 465
Query: 327 TVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGY 386
++ M+ C D +Y T++ + + + A + +K G P V+TYG+++ G
Sbjct: 466 ELYYAMKDQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTMGHHPTVVTYGSVVDGL 525
Query: 387 AKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQ 446
AK++ L++ ++++ + NGI+ NQ I+++++D +GK D A + +EM G P+
Sbjct: 526 AKIDRLDEAYMLFEEAKSNGIELNQVIYSSLIDGFGKVGRVDEAYLVMEEMMQKGLTPNV 585
Query: 447 KAKNILLSLAKTADERNEA 465
N LL A+E NEA
Sbjct: 586 YTWNCLLDGLVKAEEINEA 604
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 92/375 (24%), Positives = 187/375 (49%), Gaps = 8/375 (2%)
Query: 92 WDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAE 151
++ N LI + ++G + A +L M + +V + ++ +G+ G+ A
Sbjct: 92 YEVNVHLLTTLIRVFSREGRVDAALSLLDEMKSNTFDADIVLYNVCIDCFGKVGKVDMAW 151
Query: 152 AIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMI 211
F M+++G P +TY ++ + +AN+ EA E+F + E++ P ++ MI
Sbjct: 152 KFFHEMKANGLVPDDVTYTSMMGVLCKANRLDEAVEIFEQM---EQNRQVPCAYAYNTMI 208
Query: 212 YMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSF---ETNYKEVSKIYDQMQRAGLQ 268
Y AG +++A L +G S V YN +++ + + +I+++M+R +
Sbjct: 209 MGYGSAGKFDEAYSLLERQRAKGCIPSVVAYNCILTCLGKKGKTDKALRIFEEMKRDAM- 267
Query: 269 PDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTV 328
P++ +Y ++I KA E A V + M +AG+ P + NI++D + +D+A ++
Sbjct: 268 PNLPTYNIIIGMLCKAGNVEAAFKVRDAMKEAGLFPNVRTINIMIDRLCKAQKLDEACSI 327
Query: 329 FKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAK 388
F+ M CSPD ++ +++ ++ A + + R+ +PNV+ Y +LI+ + K
Sbjct: 328 FEGMDYKVCSPDGATFCSLIDGLGKQGRVDDAYRIYERMLDADQIPNVVVYTSLIRNFFK 387
Query: 389 VNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKA 448
+ E ++Y +M +G P+ + T MD K + + ++E+++ GF PD ++
Sbjct: 388 CDRKEDGHKMYKEMMRSGCSPDLMLLNTYMDCVFKAGETEKGRALFEEIKARGFLPDTRS 447
Query: 449 KNILL-SLAKTADER 462
+IL+ SL K R
Sbjct: 448 YSILIHSLVKAGFAR 462
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 95/375 (25%), Positives = 176/375 (46%), Gaps = 8/375 (2%)
Query: 99 FLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQ 158
F LI GKQG + A ++ M P+VV +T+L+ + + R ++ +++ M
Sbjct: 343 FCSLIDGLGKQGRVDDAYRIYERMLDADQIPNVVVYTSLIRNFFKCDRKEDGHKMYKEMM 402
Query: 159 SSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKS-PLKPDQKMFHMMIYMYKKA 217
SG P + + +A + ++ +F +E K+ PD + + ++I+ KA
Sbjct: 403 RSGCSPDLMLLNTYMDCVFKAGETEKGRALF----EEIKARGFLPDTRSYSILIHSLVKA 458
Query: 218 GGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSKIY---DQMQRAGLQPDVVSY 274
G + +L+ M ++G T YN+++ +V+K Y ++M+ G P VV+Y
Sbjct: 459 GFARETYELYYAMKDQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTMGHHPTVVTY 518
Query: 275 ALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRR 334
+++ K R +EA +FEE G+ Y+ L+D F G VD+A V + M +
Sbjct: 519 GSVVDGLAKIDRLDEAYMLFEEAKSNGIELNQVIYSSLIDGFGKVGRVDEAYLVMEEMMQ 578
Query: 335 DRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEK 394
+P++ ++ +L V A ++ A F+ +K PN ITY LI G KV K
Sbjct: 579 KGLTPNVYTWNCLLDGLVKAEEINEALVCFQSMKDLKCTPNQITYCILINGLCKVRKFNK 638
Query: 395 MMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLS 454
+ +M+ G+KPN +T ++ K+ + A ++ + G PD + N ++
Sbjct: 639 AFVFWQEMQKQGLKPNTITYTAMISGLAKSGNVAQASSLFERFRASGGIPDSASYNAMIE 698
Query: 455 LAKTADERNEANELL 469
A+ +A +L
Sbjct: 699 GLSIANRALDAYQLF 713
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 89/368 (24%), Positives = 157/368 (42%), Gaps = 17/368 (4%)
Query: 90 SWWDFNEM----------DFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALME 139
+W F+EM + ++ K ++A ++ M + P ++ ++
Sbjct: 150 AWKFFHEMKANGLVPDDVTYTSMMGVLCKANRLDEAVEIFEQMEQNRQVPCAYAYNTMIM 209
Query: 140 AYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSP 199
YG G++ A ++ R ++ G PS + Y IL + K +A +F +E K
Sbjct: 210 GYGSAGKFDEAYSLLERQRAKGCIPSVVAYNCILTCLGKKGKTDKALRIF----EEMKRD 265
Query: 200 LKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSL---MSFETNYKEVS 256
P+ ++++I M KAG E A K+ M E G+ + T N + + E
Sbjct: 266 AMPNLPTYNIIIGMLCKAGNVEAAFKVRDAMKEAGLFPNVRTINIMIDRLCKAQKLDEAC 325
Query: 257 KIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAF 316
I++ M PD ++ LI+ GK R ++A ++E MLDA P Y L+ F
Sbjct: 326 SIFEGMDYKVCSPDGATFCSLIDGLGKQGRVDDAYRIYERMLDADQIPNVVVYTSLIRNF 385
Query: 317 AISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNV 376
+ ++K M R CSPD+ T + A + E F +K GF+P+
Sbjct: 386 FKCDRKEDGHKMYKEMMRSGCSPDLMLLNTYMDCVFKAGETEKGRALFEEIKARGFLPDT 445
Query: 377 ITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKE 436
+Y LI K + E+Y M+ G + + T++D + K+ + A +E
Sbjct: 446 RSYSILIHSLVKAGFARETYELYYAMKDQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEE 505
Query: 437 MESCGFPP 444
M++ G P
Sbjct: 506 MKTMGHHP 513
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 89/340 (26%), Positives = 152/340 (44%), Gaps = 9/340 (2%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
L+ + K +A +L M + P+ ++T L+ A G A+F +MQ G
Sbjct: 32 LVASCVKSRKLIEAFDLLQMMRHFKFRPAFSAYTTLIGALSEVGESDRMLALFNQMQELG 91
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKS-PLKPDQKMFHMMIYMYKKAGGY 220
+ ++++F + A ++LLDE KS D ++++ I + K G
Sbjct: 92 YEVNVHLLTTLIRVFSREGRVDAA----LSLLDEMKSNTFDADIVLYNVCIDCFGKVGKV 147
Query: 221 EKARKLFALMAERGVQQSTVTYNSLMSF---ETNYKEVSKIYDQMQRAGLQPDVVSYALL 277
+ A K F M G+ VTY S+M E +I++QM++ P +Y +
Sbjct: 148 DMAWKFFHEMKANGLVPDDVTYTSMMGVLCKANRLDEAVEIFEQMEQNRQVPCAYAYNTM 207
Query: 278 INAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRC 337
I YG A + +EA ++ E G P+ AYN +L G D+A +F+ M+RD
Sbjct: 208 IMGYGSAGKFDEAYSLLERQRAKGCIPSVVAYNCILTCLGKKGKTDKALRIFEEMKRDA- 266
Query: 338 SPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMME 397
P++ +Y ++ A ++E A K +K+ G PNV T +I K L++
Sbjct: 267 MPNLPTYNIIIGMLCKAGNVEAAFKVRDAMKEAGLFPNVRTINIMIDRLCKAQKLDEACS 326
Query: 398 IYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEM 437
I++ M P+ F +++D GK D A Y+ M
Sbjct: 327 IFEGMDYKVCSPDGATFCSLIDGLGKQGRVDDAYRIYERM 366
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 75/349 (21%), Positives = 155/349 (44%), Gaps = 41/349 (11%)
Query: 122 MNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANK 181
M + G +P ++ M+ + G + A+F +++ G P +Y I++ V+A
Sbjct: 401 MMRSGCSPDLMLLNTYMDCVFKAGETEKGRALFEEIKARGFLPDTRSYSILIHSLVKAGF 460
Query: 182 FKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVT 241
+E E++ + D+ D + ++ +I + K+G KA +L M G + VT
Sbjct: 461 ARETYELYYAMKDQ---GCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTMGHHPTVVT 517
Query: 242 YNSL---MSFETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEML 298
Y S+ ++ E ++++ + G++ + V Y+ LI+ +GK R +EA V EEM+
Sbjct: 518 YGSVVDGLAKIDRLDEAYMLFEEAKSNGIELNQVIYSSLIDGFGKVGRVDEAYLVMEEMM 577
Query: 299 DAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPD----------IC------ 342
G+ P +N LLD + +++A F+ M+ +C+P+ +C
Sbjct: 578 QKGLTPNVYTWNCLLDGLVKAEEINEALVCFQSMKDLKCTPNQITYCILINGLCKVRKFN 637
Query: 343 -------------------SYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLI 383
+YT M+S + ++ A F R + G +P+ +Y +I
Sbjct: 638 KAFVFWQEMQKQGLKPNTITYTAMISGLAKSGNVAQASSLFERFRASGGIPDSASYNAMI 697
Query: 384 KGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVV 432
+G + N +++++ R+ G + ++DA K + + A +
Sbjct: 698 EGLSIANRALDAYQLFEETRLKGCSIHTKTCVALLDALHKAECLEQAAI 746
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 90/201 (44%)
Query: 254 EVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILL 313
E + M+ +P +Y LI A + + LA+F +M + G L+
Sbjct: 44 EAFDLLQMMRHFKFRPAFSAYTTLIGALSEVGESDRMLALFNQMQELGYEVNVHLLTTLI 103
Query: 314 DAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFV 373
F+ G VD A ++ M+ + DI Y + + ++ A KFF +K +G V
Sbjct: 104 RVFSREGRVDAALSLLDEMKSNTFDADIVLYNVCIDCFGKVGKVDMAWKFFHEMKANGLV 163
Query: 374 PNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVW 433
P+ +TY +++ K N L++ +EI+++M N P + T++ YG FD A
Sbjct: 164 PDDVTYTSMMGVLCKANRLDEAVEIFEQMEQNRQVPCAYAYNTMIMGYGSAGKFDEAYSL 223
Query: 434 YKEMESCGFPPDQKAKNILLS 454
+ + G P A N +L+
Sbjct: 224 LERQRAKGCIPSVVAYNCILT 244
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/270 (23%), Positives = 117/270 (43%), Gaps = 41/270 (15%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSH--------------------------- 134
+I + K G NKA ++L M G+ P+VV++
Sbjct: 486 VIDGFCKSGKVNKAYQLLEEMKTMGHHPTVVTYGSVVDGLAKIDRLDEAYMLFEEAKSNG 545
Query: 135 --------TALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAE 186
++L++ +G+ GR A + M G P+ T+ +L V+A + EA
Sbjct: 546 IELNQVIYSSLIDGFGKVGRVDEAYLVMEEMMQKGLTPNVYTWNCLLDGLVKAEEINEAL 605
Query: 187 EVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLM 246
F ++ D + +P +Q + ++I K + KA + M ++G++ +T+TY +++
Sbjct: 606 VCFQSMKDLKCTP---NQITYCILINGLCKVRKFNKAFVFWQEMQKQGLKPNTITYTAMI 662
Query: 247 SF---ETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVR 303
S N + S ++++ + +G PD SY +I A R +A +FEE G
Sbjct: 663 SGLAKSGNVAQASSLFERFRASGGIPDSASYNAMIEGLSIANRALDAYQLFEETRLKGCS 722
Query: 304 PTHKAYNILLDAFAISGMVDQARTVFKCMR 333
K LLDA + ++QA V +R
Sbjct: 723 IHTKTCVALLDALHKAECLEQAAIVGAVLR 752
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 51/219 (23%), Positives = 99/219 (45%)
Query: 251 NYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYN 310
N+ + +I +M AG P + L+ + K+R+ EA + + M RP AY
Sbjct: 6 NFDYLEQILGEMSIAGFGPTNYTCVELVASCVKSRKLIEAFDLLQMMRHFKFRPAFSAYT 65
Query: 311 ILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQD 370
L+ A + G D+ +F M+ ++ TT++ + ++ A +K +
Sbjct: 66 TLIGALSEVGESDRMLALFNQMQELGYEVNVHLLTTLIRVFSREGRVDAALSLLDEMKSN 125
Query: 371 GFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSA 430
F +++ Y I + KV ++ + + +M+ NG+ P+ +T++M K D A
Sbjct: 126 TFDADIVLYNVCIDCFGKVGKVDMAWKFFHEMKANGLVPDDVTYTSMMGVLCKANRLDEA 185
Query: 431 VVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELL 469
V +++ME P A N ++ +A + +EA LL
Sbjct: 186 VEIFEQMEQNRQVPCAYAYNTMIMGYGSAGKFDEAYSLL 224
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/187 (21%), Positives = 85/187 (45%)
Query: 293 VFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYV 352
+ EM AG PT+ L+ + S + +A + + MR + P +YTT++ A
Sbjct: 13 ILGEMSIAGFGPTNYTCVELVASCVKSRKLIEAFDLLQMMRHFKFRPAFSAYTTLIGALS 72
Query: 353 NASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQT 412
+ + F ++++ G+ NV TLI+ +++ ++ + + D+M+ N +
Sbjct: 73 EVGESDRMLALFNQMQELGYEVNVHLLTTLIRVFSREGRVDAALSLLDEMKSNTFDADIV 132
Query: 413 IFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNF 472
++ +D +GK D A ++ EM++ G PD ++ + A+ +EA E+
Sbjct: 133 LYNVCIDCFGKVGKVDMAWKFFHEMKANGLVPDDVTYTSMMGVLCKANRLDEAVEIFEQM 192
Query: 473 NHPNNEP 479
P
Sbjct: 193 EQNRQVP 199
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/129 (24%), Positives = 67/129 (51%), Gaps = 4/129 (3%)
Query: 61 DLVLGTLVRLKQLKKWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLS 120
+ +L LV+ +++ + V + ++ L+ N++ + +LI K FNKA
Sbjct: 589 NCLLDGLVKAEEINEALVCFQSMKDLKCTP----NQITYCILINGLCKVRKFNKAFVFWQ 644
Query: 121 FMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEAN 180
M K+G P+ +++TA++ + G A ++F R ++SG P + +Y +++ AN
Sbjct: 645 EMQKQGLKPNTITYTAMISGLAKSGNVAQASSLFERFRASGGIPDSASYNAMIEGLSIAN 704
Query: 181 KFKEAEEVF 189
+ +A ++F
Sbjct: 705 RALDAYQLF 713
>gi|255661202|gb|ACU25770.1| pentatricopeptide repeat-containing protein [Tamonea boxiana]
Length = 426
Score = 152 bits (385), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 99/377 (26%), Positives = 184/377 (48%), Gaps = 39/377 (10%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
LI K D+++A + S + + G AP +V++ +++ +G+ ++ A A+ M+++G
Sbjct: 50 LIELSRKLCDYSRAISIFSRLKRSGIAPDLVAYNSMINVFGKAKLFREARALVSEMRTAG 109
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
P ++Y +L ++VE KF EA +F + + + S D ++MI +Y + G +
Sbjct: 110 VMPDTVSYCTLLTMYVENQKFLEALSLFSEMREIQCSF---DLTTCNIMIDVYGQLGMAK 166
Query: 222 KARKLFALMAERGVQQSTVTYNSLMSFETN---YKEVSKIYDQMQRAGLQPDVVSYALLI 278
+A KLF M + G++ + V+YN+L+ + + E ++ MQR ++ +VV+Y ++
Sbjct: 167 EADKLFWSMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMM 226
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCS 338
YGK E+A + +EM D G+ P Y+ ++ + G +D+A +F+ +R
Sbjct: 227 VIYGKTLEHEKANNLIQEMQDRGIEPNAITYSTIISIWGKVGKLDRAAMLFQKLRCSGIE 286
Query: 339 PDICSYTTMLSAY-------------------------------VNASDMEGAEKFFRRL 367
D Y TM+ AY A +E A FR+
Sbjct: 287 IDQVLYQTMIVAYERAGLVAHAKRLLQELKRPDNIPRDTAIHILAGAGRIEEATWVFRQA 346
Query: 368 KQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDF 427
+ G V ++ + +I ++K ++E++DKMR G P+ + +++AYGK +F
Sbjct: 347 VEAGEVKDITVFERMINLFSKHKKYPNVVEVFDKMRGLGYFPHSNVIALVLNAYGKLHEF 406
Query: 428 DSAVVWYKEM--ESCGF 442
D A Y EM E C F
Sbjct: 407 DKANSVYMEMQDEGCAF 423
Score = 125 bits (315), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 87/325 (26%), Positives = 147/325 (45%), Gaps = 38/325 (11%)
Query: 200 LKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFE---TNYKEVS 256
L PD+ + +I + K G ++ A M E V V Y++L+ +Y
Sbjct: 5 LSPDRYTYSTLITHFGKEGLFDDALSWLQKMEEDRVPGDLVLYSNLIELSRKLCDYSRAI 64
Query: 257 KIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAF 316
I+ +++R+G+ PD+V+Y +IN +GKA+ EA A+ EM AGV P +Y LL +
Sbjct: 65 SIFSRLKRSGIAPDLVAYNSMINVFGKAKLFREARALVSEMRTAGVMPDTVSYCTLLTMY 124
Query: 317 AISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNV 376
+ +A ++F MR +CS D+ + M+ Y + A+K F +++ G PNV
Sbjct: 125 VENQKFLEALSLFSEMREIQCSFDLTTCNIMIDVYGQLGMAKEADKLFWSMRKMGIEPNV 184
Query: 377 ITYGTLIKGYA---------------KVNNLEK-------MMEIYDK------------- 401
++Y TL++ Y + N+E+ MM IY K
Sbjct: 185 VSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMVIYGKTLEHEKANNLIQE 244
Query: 402 MRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADE 461
M+ GI+PN ++TI+ +GK D A + ++++ G DQ ++ + A
Sbjct: 245 MQDRGIEPNAITYSTIISIWGKVGKLDRAAMLFQKLRCSGIEIDQVLYQTMIVAYERAGL 304
Query: 462 RNEANELLGNFNHPNNEPGINGLSI 486
A LL P+N P + I
Sbjct: 305 VAHAKRLLQELKRPDNIPRDTAIHI 329
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/245 (23%), Positives = 118/245 (48%), Gaps = 6/245 (2%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + + L+ YG F +A + M +K +VV++ ++M YG+ ++ A +
Sbjct: 183 NVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMVIYGKTLEHEKANNLI 242
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
+ MQ G P+A+TY I+ ++ + K A +F L S ++ DQ ++ MI Y
Sbjct: 243 QEMQDRGIEPNAITYSTIISIWGKVGKLDRAAMLFQKL---RCSGIEIDQVLYQTMIVAY 299
Query: 215 KKAGGYEKARKLFA-LMAERGVQQSTVTYNSLMSFETNYKEVSKIYDQMQRAGLQPDVVS 273
++AG A++L L + + T + +++ +E + ++ Q AG D+
Sbjct: 300 ERAGLVAHAKRLLQELKRPDNIPRDTAIH--ILAGAGRIEEATWVFRQAVEAGEVKDITV 357
Query: 274 YALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMR 333
+ +IN + K ++ + VF++M G P ++L+A+ D+A +V+ M+
Sbjct: 358 FERMINLFSKHKKYPNVVEVFDKMRGLGYFPHSNVIALVLNAYGKLHEFDKANSVYMEMQ 417
Query: 334 RDRCS 338
+ C+
Sbjct: 418 DEGCA 422
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 83/371 (22%), Positives = 160/371 (43%), Gaps = 56/371 (15%)
Query: 44 AVAVLRSERTRGQPLPKDLVLGTLVRL-----KQLKKWNVVSEVLEWLRIQSWWDFNEMD 98
A A++ RT G +P + TL+ + K L+ ++ SE+ E IQ +D +
Sbjct: 98 ARALVSEMRTAG-VMPDTVSYCTLLTMYVENQKFLEALSLFSEMRE---IQCSFDLTTCN 153
Query: 99 FLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQ 158
++I YG+ G +A+K+ M K G P+VVS+ L+ YG + A +FR MQ
Sbjct: 154 --IMIDVYGQLGMAKEADKLFWSMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQ 211
Query: 159 SSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAG 218
+ +TY + M+ +Y K
Sbjct: 212 RKNIEQNVVTY--------------------------------------NSMMVIYGKTL 233
Query: 219 GYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSK---IYDQMQRAGLQPDVVSYA 275
+EKA L M +RG++ + +TY++++S ++ + ++ +++ +G++ D V Y
Sbjct: 234 EHEKANNLIQEMQDRGIEPNAITYSTIISIWGKVGKLDRAAMLFQKLRCSGIEIDQVLYQ 293
Query: 276 LLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRD 335
+I AY +A A + +E+ P A +IL A G +++A VF+
Sbjct: 294 TMIVAYERAGLVAHAKRLLQELKRPDNIPRDTAIHILAGA----GRIEEATWVFRQAVEA 349
Query: 336 RCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKM 395
DI + M++ + + F +++ G+ P+ ++ Y K++ +K
Sbjct: 350 GEVKDITVFERMINLFSKHKKYPNVVEVFDKMRGLGYFPHSNVIALVLNAYGKLHEFDKA 409
Query: 396 MEIYDKMRVNG 406
+Y +M+ G
Sbjct: 410 NSVYMEMQDEG 420
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 42/181 (23%), Positives = 78/181 (43%)
Query: 301 GVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGA 360
+ P Y+ L+ F G+ D A + + M DR D+ Y+ ++ D A
Sbjct: 4 ALSPDRYTYSTLITHFGKEGLFDDALSWLQKMEEDRVPGDLVLYSNLIELSRKLCDYSRA 63
Query: 361 EKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDA 420
F RLK+ G P+++ Y ++I + K + + +MR G+ P+ + T++
Sbjct: 64 ISIFSRLKRSGIAPDLVAYNSMINVFGKAKLFREARALVSEMRTAGVMPDTVSYCTLLTM 123
Query: 421 YGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPG 480
Y +N+ F A+ + EM D NI++ + EA++L + EP
Sbjct: 124 YVENQKFLEALSLFSEMREIQCSFDLTTCNIMIDVYGQLGMAKEADKLFWSMRKMGIEPN 183
Query: 481 I 481
+
Sbjct: 184 V 184
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/123 (22%), Positives = 65/123 (52%)
Query: 333 RRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNL 392
R SPD +Y+T+++ + + A + +++++D +++ Y LI+ K+ +
Sbjct: 1 RERALSPDRYTYSTLITHFGKEGLFDDALSWLQKMEEDRVPGDLVLYSNLIELSRKLCDY 60
Query: 393 EKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNIL 452
+ + I+ +++ +GI P+ + ++++ +GK K F A EM + G PD + L
Sbjct: 61 SRAISIFSRLKRSGIAPDLVAYNSMINVFGKAKLFREARALVSEMRTAGVMPDTVSYCTL 120
Query: 453 LSL 455
L++
Sbjct: 121 LTM 123
>gi|147771903|emb|CAN75708.1| hypothetical protein VITISV_031421 [Vitis vinifera]
Length = 1313
Score = 152 bits (385), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 95/391 (24%), Positives = 190/391 (48%), Gaps = 7/391 (1%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
+ + F +I G G ++AE +L+ M ++G +P ++ + Y GG A +
Sbjct: 684 DTITFNTMIYTCGSHGHLSEAETLLTEMEERGISPDTKTYNIFLSLYADGGNIDAALKCY 743
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
R+++ G P +T++ +L + E N E E V + + ++S ++ D+ ++I MY
Sbjct: 744 RKIREVGLFPDVVTHRAVLHVLCERNMVGEVETV---IAEMKRSRVRVDEHSIPVVIKMY 800
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETN---YKEVSKIYDQMQRAGLQPDV 271
G +KA K+F + S+ T +++ + E ++ + G + DV
Sbjct: 801 VNEGLLDKA-KIFLEEHLLEDELSSRTRVAIIDAYAEKGLWAEAENVFIGKRDLGQKKDV 859
Query: 272 VSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKC 331
V Y +++ AYGKA+ ++A ++F+ M + G P YN L+ F+ +VD+AR +
Sbjct: 860 VEYNVMVKAYGKAKLYDKAFSLFKGMRNHGTWPNESTYNSLIQMFSGGDLVDEARDILAE 919
Query: 332 MRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNN 391
M++ P +++ +++ Y + A + + + G PN + YG+LI G+++ N
Sbjct: 920 MQKMGFKPQCLTFSAVIACYARLGRLPDAVGVYEEMVRLGVKPNEVVYGSLINGFSETGN 979
Query: 392 LEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNI 451
+E+ + + KM GI NQ + T+++ AY K + A Y+ M+ PD A N
Sbjct: 980 VEEALCYFRKMDEFGISANQIVLTSLIKAYSKVGCLEGAKTLYEGMKDLEGGPDIVASNS 1039
Query: 452 LLSLAKTADERNEANELLGNFNHPNNEPGIN 482
+++L +EA + + + G++
Sbjct: 1040 MINLYADLGLVSEAKLIFDDLRQKGSADGVS 1070
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 89/404 (22%), Positives = 179/404 (44%), Gaps = 13/404 (3%)
Query: 38 IEEVGSAVAVLRSERTRGQPLPKDLVLGTLVRLKQLKKWNVVSEVLEWLRIQSWWDFNEM 97
++E +A ++ + Q L V+ RL +L V E + L ++ NE+
Sbjct: 910 VDEARDILAEMQKMGFKPQCLTFSAVIACYARLGRLPDAVGVYEEMVRLGVKP----NEV 965
Query: 98 DFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRM 157
+ LI + + G+ +A M++ G + + + T+L++AY + G + A+ ++ M
Sbjct: 966 VYGSLINGFSETGNVEEALCYFRKMDEFGISANQIVLTSLIKAYSKVGCLEGAKTLYEGM 1025
Query: 158 QSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKA 217
+ P + ++ L+ + EA+ +F D+ + D F M+Y+YK
Sbjct: 1026 KDLEGGPDIVASNSMINLYADLGLVSEAKLIF----DDLRQKGSADGVSFATMMYLYKNL 1081
Query: 218 GGYEKARKLFALMAERGVQQSTVTYNSLMS-FETN--YKEVSKIYDQMQRAGLQPDVVSY 274
G ++A + M + G + ++N +M+ + TN ++ +M + PD ++
Sbjct: 1082 GMLDEAIDVADEMKQSGFLRDCASFNKVMACYATNGQLSACGELLHEMISRRILPDTGTF 1141
Query: 275 ALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRR 334
++ K EA+ E G +A ++ F+ G+ A +
Sbjct: 1142 KVMFTVLKKGGLPTEAVTQLESSYQEGKPYARQA--VITSVFSTVGLHAFALESCETFLN 1199
Query: 335 DRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEK 394
D Y + AY + ++ A K F +++ +G P+++TY L Y K LE
Sbjct: 1200 AEVDLDSSFYNVAIYAYGASGSIDKALKMFMKMQDEGLEPDLVTYINLAGCYGKAGMLEG 1259
Query: 395 MMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEME 438
+ IY +++ I+PN+++F I+DAY K D A + +EM+
Sbjct: 1260 LKRIYSQLKYREIEPNESLFKAIIDAYRSAKRHDLAELVSQEMK 1303
Score = 99.0 bits (245), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 97/468 (20%), Positives = 186/468 (39%), Gaps = 57/468 (12%)
Query: 68 VRLKQLKKWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGY 127
V LK+ W V V EW++ Q + N + + +++ G+ +++ M K G
Sbjct: 461 VILKEQSSWERVLRVFEWIKSQEDYVPNVIHYNVVLRVLGRAQKWDELRLCWIEMAKNGV 520
Query: 128 APSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEE 187
P+ ++ L++ YG+ G K A + M+ G P +T ++++ +A +F A+
Sbjct: 521 LPTNNTYGMLVDVYGKAGLVKEALLWIKHMKLRGVFPDEVTMNTVVRVLKDAGEFDWADR 580
Query: 188 VFM---------------TLLDEEKSPLKPDQKMFHMMIYMYKKAGG------------- 219
+ ++ D + + H + K GG
Sbjct: 581 FYRDWCVGKVELGDFDLESVADSDDEIGSAPVSLKHFLSTELFKIGGRRPISNIMDSSNT 640
Query: 220 -------------------YEKARKL------FALMAERGVQQSTVTYNSLMSFETNYKE 254
Y KA +L FA M + GV T+T+N+++ ++
Sbjct: 641 DGSRHKPRLTATYNTLIDLYGKAGRLKDAADVFAEMLKLGVAMDTITFNTMIYTCGSHGH 700
Query: 255 VSK---IYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNI 311
+S+ + +M+ G+ PD +Y + ++ Y + AL + ++ + G+ P +
Sbjct: 701 LSEAETLLTEMEERGISPDTKTYNIFLSLYADGGNIDAALKCYRKIREVGLFPDVVTHRA 760
Query: 312 LLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDG 371
+L MV + TV M+R R D S ++ YVN ++ A K F
Sbjct: 761 VLHVLCERNMVGEVETVIAEMKRSRVRVDEHSIPVVIKMYVNEGLLDKA-KIFLEEHLLE 819
Query: 372 FVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAV 431
+ T +I YA+ + ++ R G K + + ++ AYGK K +D A
Sbjct: 820 DELSSRTRVAIIDAYAEKGLWAEAENVFIGKRDLGQKKDVVEYNVMVKAYGKAKLYDKAF 879
Query: 432 VWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEP 479
+K M + G P++ N L+ + D +EA ++L +P
Sbjct: 880 SLFKGMRNHGTWPNESTYNSLIQMFSGGDLVDEARDILAEMQKMGFKP 927
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 80/411 (19%), Positives = 174/411 (42%), Gaps = 41/411 (9%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
NE + LI + ++A +L+ M K G+ P ++ +A++ Y R GR +A ++
Sbjct: 893 NESTYNSLIQMFSGGDLVDEARDILAEMQKMGFKPQCLTFSAVIACYARLGRLPDAVGVY 952
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
M G +P+ + Y ++ F E +EA F + ++ + +Q + +I Y
Sbjct: 953 EEMVRLGVKPNEVVYGSLINGFSETGNVEEALCYFRKM---DEFGISANQIVLTSLIKAY 1009
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSK---IYDQMQRAGLQPDV 271
K G E A+ L+ M + V NS+++ + VS+ I+D +++ G D
Sbjct: 1010 SKVGCLEGAKTLYEGMKDLEGGPDIVASNSMINLYADLGLVSEAKLIFDDLRQKG-SADG 1068
Query: 272 VSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKC 331
VS+A ++ Y +EA+ V +EM +G ++N ++ +A +G + +
Sbjct: 1069 VSFATMMYLYKNLGMLDEAIDVADEMKQSGFLRDCASFNKVMACYATNGQLSACGELLHE 1128
Query: 332 MRRDRCSPDICSYTTMLSAYVNA-------SDMEGAEKFFRRLKQDGFVPNVIT------ 378
M R PD ++ M + + +E + + + + + +V +
Sbjct: 1129 MISRRILPDTGTFKVMFTVLKKGGLPTEAVTQLESSYQEGKPYARQAVITSVFSTVGLHA 1188
Query: 379 --------------------YGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIM 418
Y I Y +++K ++++ KM+ G++P+ + +
Sbjct: 1189 FALESCETFLNAEVDLDSSFYNVAIYAYGASGSIDKALKMFMKMQDEGLEPDLVTYINLA 1248
Query: 419 DAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELL 469
YGK + Y +++ P++ ++ ++A +R++ EL+
Sbjct: 1249 GCYGKAGMLEGLKRIYSQLKYREIEPNESLFKAIIDAYRSA-KRHDLAELV 1298
Score = 58.5 bits (140), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 67/146 (45%), Gaps = 7/146 (4%)
Query: 355 SDMEGAEKFFRRLK-QDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTI 413
S E + F +K Q+ +VPNVI Y +++ + +++ + +M NG+ P
Sbjct: 467 SSWERVLRVFEWIKSQEDYVPNVIHYNVVLRVLGRAQKWDELRLCWIEMAKNGVLPTNNT 526
Query: 414 FTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFN 473
+ ++D YGK A++W K M+ G PD+ N ++ + K A E + A+ ++
Sbjct: 527 YGMLVDVYGKAGLVKEALLWIKHMKLRGVFPDEVTMNTVVRVLKDAGEFDWADRFYRDWC 586
Query: 474 HPNNEPGINGLSISVDEEDDDDDDDE 499
E G D E D DDE
Sbjct: 587 VGKVELG------DFDLESVADSDDE 606
>gi|224125496|ref|XP_002319601.1| predicted protein [Populus trichocarpa]
gi|222857977|gb|EEE95524.1| predicted protein [Populus trichocarpa]
Length = 460
Score = 152 bits (385), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 95/363 (26%), Positives = 173/363 (47%), Gaps = 7/363 (1%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
+I + K +A S M K+G P V ++++++ + GR A ++F++M
Sbjct: 86 IIDSLCKDRLVTEAMDFFSEMVKEGIPPDVFTYSSILHGFCNLGRVNEATSLFKQMVERN 145
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
P+ +T+ I++ + EA VF T+ ++ L+PD ++ ++ Y +
Sbjct: 146 VIPNKVTFTILIDGLCKKRMISEAWLVFETMTEKG---LEPDVYTYNALVDGYCSRSQMD 202
Query: 222 KARKLFALMAERGVQQSTVTYNSLMSFETN---YKEVSKIYDQMQRAGLQPDVVSYALLI 278
+A+KLF +M +G + +YN L++ E + +M L PD+ +Y+ L+
Sbjct: 203 EAQKLFNIMDRKGCAPNVRSYNILINGHCKSGRIDEAKGLLAEMSHKSLTPDIFTYSTLM 262
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCS 338
+ + R +EA + +EM G+ P Y+I+LD G +D+A + K M+ +
Sbjct: 263 RGFCQVGRPQEAQELLKEMCSYGLLPNLITYSIVLDGLCKHGHLDEAFELLKAMQESKIE 322
Query: 339 PDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEI 398
P+I YT ++ +E A + F L G P V+TY +I G K + E+
Sbjct: 323 PNIFIYTILIEGMCTFGKLEAARELFSNLFVKGIQPTVVTYTVMISGLLKGGLSNEACEL 382
Query: 399 YDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKT 458
+ +M VNG PN + I+ + +N D +AV +EM GF D +L L ++
Sbjct: 383 FREMAVNGCLPNSCTYNVIIQGFLRNGDTPNAVRLIEEMVGKGFSADSSTFRMLSDL-ES 441
Query: 459 ADE 461
+DE
Sbjct: 442 SDE 444
Score = 148 bits (374), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 89/376 (23%), Positives = 178/376 (47%), Gaps = 6/376 (1%)
Query: 97 MDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRR 156
+ F L++ + A K+ M K G+ P V++++ ++ + G A + ++
Sbjct: 11 VTFNTLLSGLCSKAKIMDAVKLFDEMVKMGHEPDVITYSTIINGLCKMGNTTMALQLLKK 70
Query: 157 MQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKK 216
M+ G +P+ + Y I+ + EA + F ++ E + PD + +++ +
Sbjct: 71 MEEKGCKPNVVAYNTIIDSLCKDRLVTEAMDFFSEMVKEG---IPPDVFTYSSILHGFCN 127
Query: 217 AGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSK---IYDQMQRAGLQPDVVS 273
G +A LF M ER V + VT+ L+ + +S+ +++ M GL+PDV +
Sbjct: 128 LGRVNEATSLFKQMVERNVIPNKVTFTILIDGLCKKRMISEAWLVFETMTEKGLEPDVYT 187
Query: 274 YALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMR 333
Y L++ Y + +EA +F M G P ++YNIL++ SG +D+A+ + M
Sbjct: 188 YNALVDGYCSRSQMDEAQKLFNIMDRKGCAPNVRSYNILINGHCKSGRIDEAKGLLAEMS 247
Query: 334 RDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLE 393
+PDI +Y+T++ + + A++ + + G +PN+ITY ++ G K +L+
Sbjct: 248 HKSLTPDIFTYSTLMRGFCQVGRPQEAQELLKEMCSYGLLPNLITYSIVLDGLCKHGHLD 307
Query: 394 KMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILL 453
+ E+ M+ + I+PN I+T +++ ++A + + G P +++
Sbjct: 308 EAFELLKAMQESKIEPNIFIYTILIEGMCTFGKLEAARELFSNLFVKGIQPTVVTYTVMI 367
Query: 454 SLAKTADERNEANELL 469
S NEA EL
Sbjct: 368 SGLLKGGLSNEACELF 383
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 88/371 (23%), Positives = 166/371 (44%), Gaps = 6/371 (1%)
Query: 122 MNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANK 181
M K G P++V+ L+ + +A +F M G P +TY I+ +
Sbjct: 1 MFKLGLQPTLVTFNTLLSGLCSKAKIMDAVKLFDEMVKMGHEPDVITYSTIINGLCKMGN 60
Query: 182 FKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVT 241
A ++ + EEK KP+ ++ +I K +A F+ M + G+ T
Sbjct: 61 TTMALQLLKKM--EEKG-CKPNVVAYNTIIDSLCKDRLVTEAMDFFSEMVKEGIPPDVFT 117
Query: 242 YNSLMSFETNY---KEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEML 298
Y+S++ N E + ++ QM + P+ V++ +LI+ K R EA VFE M
Sbjct: 118 YSSILHGFCNLGRVNEATSLFKQMVERNVIPNKVTFTILIDGLCKKRMISEAWLVFETMT 177
Query: 299 DAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDME 358
+ G+ P YN L+D + +D+A+ +F M R C+P++ SY +++ + + ++
Sbjct: 178 EKGLEPDVYTYNALVDGYCSRSQMDEAQKLFNIMDRKGCAPNVRSYNILINGHCKSGRID 237
Query: 359 GAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIM 418
A+ + P++ TY TL++G+ +V ++ E+ +M G+ PN ++ ++
Sbjct: 238 EAKGLLAEMSHKSLTPDIFTYSTLMRGFCQVGRPQEAQELLKEMCSYGLLPNLITYSIVL 297
Query: 419 DAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNE 478
D K+ D A K M+ P+ IL+ T + A EL N +
Sbjct: 298 DGLCKHGHLDEAFELLKAMQESKIEPNIFIYTILIEGMCTFGKLEAARELFSNLFVKGIQ 357
Query: 479 PGINGLSISVD 489
P + ++ +
Sbjct: 358 PTVVTYTVMIS 368
>gi|224130706|ref|XP_002328356.1| predicted protein [Populus trichocarpa]
gi|222838071|gb|EEE76436.1| predicted protein [Populus trichocarpa]
Length = 613
Score = 152 bits (384), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 104/399 (26%), Positives = 177/399 (44%), Gaps = 41/399 (10%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + + +I K G+ + A V M + G P+VV+++ ++++ + +A
Sbjct: 197 NVISYTTVINGLCKTGNTSMAVDVFKKMEQNGCKPNVVTYSTIIDSLCKDRLVNDAMEFL 256
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
M G P+ TY I+ F + EA +F ++ + + P+ F +++
Sbjct: 257 SEMVERGIPPNVFTYNSIVHGFCNLGQLNEATRLFKEMVGRD---VMPNTVTFTILVDGL 313
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSLM---SFETNYKEVSKIYDQMQRAGLQPDV 271
K G +AR +F M E+GV+ TYN+LM + E K+++ M R G P
Sbjct: 314 CKEGMVSEARLVFETMTEKGVEPDISTYNALMDGYCLQRLMNEAKKVFEIMIRKGCAPGA 373
Query: 272 VSYALLINAYGKAR-----------------------------------REEEALAVFEE 296
SY +LIN Y K+R R +EAL +F+E
Sbjct: 374 HSYNILINGYCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQLGRPKEALNLFKE 433
Query: 297 MLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASD 356
M G P Y ILLD F G +D+A + K M+ + P+I YT ++ A
Sbjct: 434 MCSYGPHPNLVTYVILLDGFCKHGHLDEALKLLKSMKEKKLEPNIVHYTILIEGMFIAGK 493
Query: 357 MEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTT 416
+E A++ F +L DG P++ TY +IKG K ++ +++ KM +G PN +
Sbjct: 494 LEVAKELFSKLFGDGTRPDIRTYTVMIKGLLKEGLSDEAYDLFRKMEDDGFLPNSCSYNV 553
Query: 417 IMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSL 455
++ + +N+D +A+ EM F + +LL L
Sbjct: 554 MIQGFLQNQDSSTAIRLIDEMVGKRFSVNLSTFQMLLDL 592
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 98/429 (22%), Positives = 189/429 (44%), Gaps = 12/429 (2%)
Query: 64 LGTLVRLKQLKKWNVVSEVLEWLRI-QSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFM 122
LG+ + KQ + ++ R+ + + N +LI + + + VL M
Sbjct: 100 LGSFAKKKQYSTVVSLCNQMDLFRVTHNVYSLN-----ILINCLCRLNHVDFSVSVLGKM 154
Query: 123 NKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKF 182
K G P ++ AL+ G+ K A +F M G P+ ++Y ++ +
Sbjct: 155 FKLGIHPDAITFNALINGLCNEGKIKEAVELFNEMVKRGHEPNVISYTTVINGLCKTGNT 214
Query: 183 KEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTY 242
A +VF + E++ KP+ + +I K A + + M ERG+ + TY
Sbjct: 215 SMAVDVFKKM---EQNGCKPNVVTYSTIIDSLCKDRLVNDAMEFLSEMVERGIPPNVFTY 271
Query: 243 NSLMSFETNY---KEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLD 299
NS++ N E ++++ +M + P+ V++ +L++ K EA VFE M +
Sbjct: 272 NSIVHGFCNLGQLNEATRLFKEMVGRDVMPNTVTFTILVDGLCKEGMVSEARLVFETMTE 331
Query: 300 AGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEG 359
GV P YN L+D + + ++++A+ VF+ M R C+P SY +++ Y + M+
Sbjct: 332 KGVEPDISTYNALMDGYCLQRLMNEAKKVFEIMIRKGCAPGAHSYNILINGYCKSRRMDE 391
Query: 360 AEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMD 419
A+ + P+ +TY TL++G ++ ++ + ++ +M G PN + ++D
Sbjct: 392 AKSLLAEMYHKALNPDTVTYSTLMQGLCQLGRPKEALNLFKEMCSYGPHPNLVTYVILLD 451
Query: 420 AYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEP 479
+ K+ D A+ K M+ P+ IL+ A + A EL P
Sbjct: 452 GFCKHGHLDEALKLLKSMKEKKLEPNIVHYTILIEGMFIAGKLEVAKELFSKLFGDGTRP 511
Query: 480 GINGLSISV 488
I ++ +
Sbjct: 512 DIRTYTVMI 520
Score = 108 bits (270), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 95/411 (23%), Positives = 165/411 (40%), Gaps = 70/411 (17%)
Query: 149 NAEAIFRRMQSSGPRPSAL-------------TYQIILKLFVEANKFKEAEEVF------ 189
+A A F RM PRPS + Y ++ L + + F+ V+
Sbjct: 76 DALASFYRMVRINPRPSVVEFGKFLGSFAKKKQYSTVVSLCNQMDLFRVTHNVYSLNILI 135
Query: 190 -----MTLLDEEKSPL--------KPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQ 236
+ +D S L PD F+ +I G ++A +LF M +RG +
Sbjct: 136 NCLCRLNHVDFSVSVLGKMFKLGIHPDAITFNALINGLCNEGKIKEAVELFNEMVKRGHE 195
Query: 237 QSTVTYNSL---MSFETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAV 293
+ ++Y ++ + N ++ +M++ G +P+VV+Y+ +I++ K R +A+
Sbjct: 196 PNVISYTTVINGLCKTGNTSMAVDVFKKMEQNGCKPNVVTYSTIIDSLCKDRLVNDAMEF 255
Query: 294 FEEMLDAGVRPTHKAYN-----------------------------------ILLDAFAI 318
EM++ G+ P YN IL+D
Sbjct: 256 LSEMVERGIPPNVFTYNSIVHGFCNLGQLNEATRLFKEMVGRDVMPNTVTFTILVDGLCK 315
Query: 319 SGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVIT 378
GMV +AR VF+ M PDI +Y ++ Y M A+K F + + G P +
Sbjct: 316 EGMVSEARLVFETMTEKGVEPDISTYNALMDGYCLQRLMNEAKKVFEIMIRKGCAPGAHS 375
Query: 379 YGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEME 438
Y LI GY K +++ + +M + P+ ++T+M + A+ +KEM
Sbjct: 376 YNILINGYCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQLGRPKEALNLFKEMC 435
Query: 439 SCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGINGLSISVD 489
S G P+ ILL +EA +LL + EP I +I ++
Sbjct: 436 SYGPHPNLVTYVILLDGFCKHGHLDEALKLLKSMKEKKLEPNIVHYTILIE 486
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 35/158 (22%), Positives = 75/158 (47%)
Query: 288 EEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTM 347
++ALA F M+ RP+ + L +FA ++ M R + ++ S +
Sbjct: 75 DDALASFYRMVRINPRPSVVEFGKFLGSFAKKKQYSTVVSLCNQMDLFRVTHNVYSLNIL 134
Query: 348 LSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGI 407
++ + ++ + ++ + G P+ IT+ LI G +++ +E++++M G
Sbjct: 135 INCLCRLNHVDFSVSVLGKMFKLGIHPDAITFNALINGLCNEGKIKEAVELFNEMVKRGH 194
Query: 408 KPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPD 445
+PN +TT+++ K + AV +K+ME G P+
Sbjct: 195 EPNVISYTTVINGLCKTGNTSMAVDVFKKMEQNGCKPN 232
>gi|302799124|ref|XP_002981321.1| hypothetical protein SELMODRAFT_114398 [Selaginella moellendorffii]
gi|300150861|gb|EFJ17509.1| hypothetical protein SELMODRAFT_114398 [Selaginella moellendorffii]
Length = 457
Score = 152 bits (384), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 95/357 (26%), Positives = 170/357 (47%), Gaps = 10/357 (2%)
Query: 127 YAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAE 186
Y +S+ L+E + GR + + M ++G P+ TY +L+ +A +F+EA
Sbjct: 13 YNHGTLSYNYLLEVLAKSGRCDHVYGTYNDMLAAGCVPNTYTYGYLLRSLCQAQRFEEAR 72
Query: 187 EVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLM 246
VF + + SP + + ++I + ++A +L M + G Q + VTY SL+
Sbjct: 73 SVFRGMAAQGCSP---NVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLL 129
Query: 247 SFETN---YKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVR 303
S KE ++ +M G PD V Y +LI+ + K EA +FEEML+ G
Sbjct: 130 SGLCKMGKLKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCI 189
Query: 304 PTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKF 363
PT YN LL F+ G + +++FK M R C P+I ++ +L + DM A +
Sbjct: 190 PTVFTYNSLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRL 249
Query: 364 FRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGK 423
F ++ G P+V++Y TLI+G + + +M +G+ P+ + ++D Y K
Sbjct: 250 FLEMRSLGCPPDVVSYNTLIRGMCSKGKPHEAQRLLREMIRSGVGPDIVSYNILIDGYSK 309
Query: 424 NKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEA----NELLGNFNHPN 476
+ D A+ + E+ G PD + + ++ A + A +++ N + P+
Sbjct: 310 SGALDHAIKLFYEIPKSGLEPDAFSYSTIIDCLCRAGKVGAAFVVFKDMIANGSAPD 366
Score = 152 bits (384), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 96/391 (24%), Positives = 185/391 (47%), Gaps = 8/391 (2%)
Query: 83 LEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYG 142
+W Q ++ + + L+ K G + + M G P+ ++ L+ +
Sbjct: 4 FQWAGSQVHYNHGTLSYNYLLEVLAKSGRCDHVYGTYNDMLAAGCVPNTYTYGYLLRSLC 63
Query: 143 RGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKP 202
+ R++ A ++FR M + G P+ +Y I++ K EA E+ ++D +P
Sbjct: 64 QAQRFEEARSVFRGMAAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGH---QP 120
Query: 203 DQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLM---SFETNYKEVSKIY 259
+ + ++ K G ++A LF+ M RG V YN L+ S + + E +++
Sbjct: 121 NVVTYGSLLSGLCKMGKLKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLF 180
Query: 260 DQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAIS 319
++M G P V +Y L++ + + ++F++ML G P +N LLD F
Sbjct: 181 EEMLEKGCIPTVFTYNSLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKM 240
Query: 320 GMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITY 379
G + +A +F MR C PD+ SY T++ + A++ R + + G P++++Y
Sbjct: 241 GDMVEAHRLFLEMRSLGCPPDVVSYNTLIRGMCSKGKPHEAQRLLREMIRSGVGPDIVSY 300
Query: 380 GTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMES 439
LI GY+K L+ ++++ ++ +G++P+ ++TI+D + +A V +K+M +
Sbjct: 301 NILIDGYSKSGALDHAIKLFYEIPKSGLEPDAFSYSTIIDCLCRAGKVGAAFVVFKDMIA 360
Query: 440 CGFPPDQKAKNILLSLAKTADER-NEANELL 469
G PD A I L + ER E+ EL
Sbjct: 361 NGSAPD-AAVVIPLVIGLCRGERLTESCELF 390
Score = 139 bits (349), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 100/412 (24%), Positives = 188/412 (45%), Gaps = 8/412 (1%)
Query: 58 LPKDLVLGTLVR-LKQLKKWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAE 116
+P G L+R L Q +++ V + Q N + +LI + ++A
Sbjct: 49 VPNTYTYGYLLRSLCQAQRFEEARSVFRGMAAQGCSP-NVFSYSILIAGLCRGQKVDEAA 107
Query: 117 KVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLF 176
++L+ M G+ P+VV++ +L+ + G+ K A +F RM G P + Y +++ F
Sbjct: 108 ELLNEMIDGGHQPNVVTYGSLLSGLCKMGKLKEAVDLFSRMVYRGCPPDGVVYNVLIDGF 167
Query: 177 VEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQ 236
+ EA +F +L EK + P ++ ++ + + G + + + LF M +G
Sbjct: 168 SKKGDMGEAYRLFEEML--EKGCI-PTVFTYNSLLSGFSRKGEFGRVQSLFKDMLRQGCV 224
Query: 237 QSTVTYNSLMSFET---NYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAV 293
+ T+N+L+ + E +++ +M+ G PDVVSY LI + EA +
Sbjct: 225 PNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSLGCPPDVVSYNTLIRGMCSKGKPHEAQRL 284
Query: 294 FEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVN 353
EM+ +GV P +YNIL+D ++ SG +D A +F + + PD SY+T++
Sbjct: 285 LREMIRSGVGPDIVSYNILIDGYSKSGALDHAIKLFYEIPKSGLEPDAFSYSTIIDCLCR 344
Query: 354 ASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTI 413
A + A F+ + +G P+ L+ G + L + E++ M P
Sbjct: 345 AGKVGAAFVVFKDMIANGSAPDAAVVIPLVIGLCRGERLTESCELFQAMVKFECVPLIPE 404
Query: 414 FTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEA 465
+ +M K K D + E+ GF PD + ++L + +D+++ A
Sbjct: 405 YNLLMYKLCKAKRSDDVCEIFHELTERGFSPDVEISKVILETLRRSDDKDAA 456
Score = 118 bits (296), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 72/286 (25%), Positives = 126/286 (44%), Gaps = 3/286 (1%)
Query: 207 FHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLM---SFETNYKEVSKIYDQMQ 263
++ ++ + K+G + + M G +T TY L+ ++E ++ M
Sbjct: 20 YNYLLEVLAKSGRCDHVYGTYNDMLAAGCVPNTYTYGYLLRSLCQAQRFEEARSVFRGMA 79
Query: 264 RAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVD 323
G P+V SY++LI + ++ +EA + EM+D G +P Y LL G +
Sbjct: 80 AQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKMGKLK 139
Query: 324 QARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLI 383
+A +F M C PD Y ++ + DM A + F + + G +P V TY +L+
Sbjct: 140 EAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYNSLL 199
Query: 384 KGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFP 443
G+++ ++ ++ M G PN F ++D + K D A + EM S G P
Sbjct: 200 SGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSLGCP 259
Query: 444 PDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGINGLSISVD 489
PD + N L+ + + +EA LL P I +I +D
Sbjct: 260 PDVVSYNTLIRGMCSKGKPHEAQRLLREMIRSGVGPDIVSYNILID 305
Score = 85.5 bits (210), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 70/352 (19%), Positives = 152/352 (43%), Gaps = 20/352 (5%)
Query: 21 DAADEAGKKNWRRLMNQIEEVGS---AVAVLRSERTRGQPLPKDLVLGTLV-----RLKQ 72
D + + L++ + ++G AV + RG P P +V L+ +
Sbjct: 115 DGGHQPNVVTYGSLLSGLCKMGKLKEAVDLFSRMVYRGCP-PDGVVYNVLIDGFSKKGDM 173
Query: 73 LKKWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVV 132
+ + + E+LE I + + +N L++ + ++G+F + + + M ++G P++
Sbjct: 174 GEAYRLFEEMLEKGCIPTVFTYNS-----LLSGFSRKGEFGRVQSLFKDMLRQGCVPNIF 228
Query: 133 SHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTL 192
+ L++ + + G A +F M+S G P ++Y +++ K EA+ + +
Sbjct: 229 TFNNLLDGFCKMGDMVEAHRLFLEMRSLGCPPDVVSYNTLIRGMCSKGKPHEAQRLLREM 288
Query: 193 LDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNY 252
+ +S + PD ++++I Y K+G + A KLF + + G++ +Y++++
Sbjct: 289 I---RSGVGPDIVSYNILIDGYSKSGALDHAIKLFYEIPKSGLEPDAFSYSTIIDCLCRA 345
Query: 253 KEVSK---IYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAY 309
+V ++ M G PD L+ + R E+ +F+ M+ P Y
Sbjct: 346 GKVGAAFVVFKDMIANGSAPDAAVVIPLVIGLCRGERLTESCELFQAMVKFECVPLIPEY 405
Query: 310 NILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAE 361
N+L+ + D +F + SPD+ +L + D + AE
Sbjct: 406 NLLMYKLCKAKRSDDVCEIFHELTERGFSPDVEISKVILETLRRSDDKDAAE 457
>gi|449453081|ref|XP_004144287.1| PREDICTED: pentatricopeptide repeat-containing protein At5g42310,
mitochondrial-like [Cucumis sativus]
gi|449489420|ref|XP_004158306.1| PREDICTED: pentatricopeptide repeat-containing protein At5g42310,
mitochondrial-like [Cucumis sativus]
Length = 720
Score = 152 bits (384), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 114/435 (26%), Positives = 183/435 (42%), Gaps = 79/435 (18%)
Query: 96 EMDFLML---ITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEA 152
E+D L+L I + K GD N+A LS + G P + A++ A G GR + AEA
Sbjct: 278 ELDGLLLNDIILGFAKAGDPNRALYFLSMVQASGLNPKTSTFVAVISALGNHGRTEEAEA 337
Query: 153 IFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIY 212
IF M+ G +P + +LK + KEAE + + EKS L PD+ + +++
Sbjct: 338 IFEEMKEGGLKPRIKAFNALLKGYARKGSLKEAESIISEM---EKSGLSPDEHTYGLLVD 394
Query: 213 MYKKAGGYEKARKLFALMAERGVQQSTVTYNSLM-----------SFE-------TNYK- 253
Y G +E AR L M R VQ +T ++ ++ +FE +N K
Sbjct: 395 AYANVGRWESARHLLKQMEARNVQPNTFIFSRILASYRDRGEWQKTFEVLREMKNSNVKP 454
Query: 254 -------------------EVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVF 294
+ YD+M G++PDVV++ LI+ + K + A +F
Sbjct: 455 DRHFYNVMIDTFGKFNCLDHAMETYDRMLSEGIEPDVVTWNTLIDCHRKHGYHDRAAELF 514
Query: 295 EEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNA 354
EEM + G P YNI++++ D+ + + M+ P++ +YTT++ Y ++
Sbjct: 515 EEMQERGYLPCPTTYNIMINSLGEQEKWDEVKILLGKMQSQGLLPNVVTYTTLVDIYGHS 574
Query: 355 SDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAK-------VNNLEKMME---------- 397
A +K G P+ Y LI +A+ VN M+
Sbjct: 575 GRFNDAIDCLEAMKSAGLKPSATMYNALINAFAQRGLSEQAVNAYRVMISDGLRPSLLAL 634
Query: 398 ------------------IYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMES 439
I M+ N +KP+ +TT+M A + FD Y+EM
Sbjct: 635 NSLINAFGEDRRDIEAFSILQYMKENDVKPDVVTYTTLMKALIRVDKFDKVPAVYEEMIL 694
Query: 440 CGFPPDQKAKNILLS 454
G PD KA+ +L S
Sbjct: 695 SGCTPDGKARAMLRS 709
Score = 138 bits (348), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 97/412 (23%), Positives = 194/412 (47%), Gaps = 11/412 (2%)
Query: 82 VLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAY 141
V+ WL+ + E+ + +LI A G+ +A F+ + + +++ AL+ A
Sbjct: 165 VVSWLQRHNLCFSYELLYSILIHALGRSEKLYEA-----FILSQKQTLTPLTYNALIGAC 219
Query: 142 GRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDE-EKSPL 200
R + A + RM+ G + + Y +I++ NK + L +E E +
Sbjct: 220 ARNNDLEKALNLMSRMRQDGFQSDFINYSLIIQSLTRTNKIDIP--LLQKLYEEIESDKI 277
Query: 201 KPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNY---KEVSK 257
+ D + + +I + KAG +A +++ G+ T T+ +++S N+ +E
Sbjct: 278 ELDGLLLNDIILGFAKAGDPNRALYFLSMVQASGLNPKTSTFVAVISALGNHGRTEEAEA 337
Query: 258 IYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFA 317
I+++M+ GL+P + ++ L+ Y + +EA ++ EM +G+ P Y +L+DA+A
Sbjct: 338 IFEEMKEGGLKPRIKAFNALLKGYARKGSLKEAESIISEMEKSGLSPDEHTYGLLVDAYA 397
Query: 318 ISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVI 377
G + AR + K M P+ ++ +L++Y + + + + R +K P+
Sbjct: 398 NVGRWESARHLLKQMEARNVQPNTFIFSRILASYRDRGEWQKTFEVLREMKNSNVKPDRH 457
Query: 378 TYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEM 437
Y +I + K N L+ ME YD+M GI+P+ + T++D + K+ D A ++EM
Sbjct: 458 FYNVMIDTFGKFNCLDHAMETYDRMLSEGIEPDVVTWNTLIDCHRKHGYHDRAAELFEEM 517
Query: 438 ESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGINGLSISVD 489
+ G+ P NI+++ ++ +E LLG P + + VD
Sbjct: 518 QERGYLPCPTTYNIMINSLGEQEKWDEVKILLGKMQSQGLLPNVVTYTTLVD 569
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 87/393 (22%), Positives = 171/393 (43%), Gaps = 43/393 (10%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNA--EAIFRRMQS 159
LI A + D KA ++S M + G+ ++++ ++++ R + + ++ ++S
Sbjct: 215 LIGACARNNDLEKALNLMSRMRQDGFQSDFINYSLIIQSLTRTNKIDIPLLQKLYEEIES 274
Query: 160 SGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGG 219
L I+ F +A A F++++ + S L P F +I G
Sbjct: 275 DKIELDGLLLNDIILGFAKAGDPNRAL-YFLSMV--QASGLNPKTSTFVAVISALGNHGR 331
Query: 220 YEKARKLFALMAERGVQQSTVTYNSLM---SFETNYKEVSKIYDQMQRAGLQPDVVSYAL 276
E+A +F M E G++ +N+L+ + + + KE I +M+++GL PD +Y L
Sbjct: 332 TEEAEAIFEEMKEGGLKPRIKAFNALLKGYARKGSLKEAESIISEMEKSGLSPDEHTYGL 391
Query: 277 LINAYGKARREEEA-----------------------------------LAVFEEMLDAG 301
L++AY R E A V EM ++
Sbjct: 392 LVDAYANVGRWESARHLLKQMEARNVQPNTFIFSRILASYRDRGEWQKTFEVLREMKNSN 451
Query: 302 VRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAE 361
V+P YN+++D F +D A + M + PD+ ++ T++ + + A
Sbjct: 452 VKPDRHFYNVMIDTFGKFNCLDHAMETYDRMLSEGIEPDVVTWNTLIDCHRKHGYHDRAA 511
Query: 362 KFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAY 421
+ F +++ G++P TY +I + +++ + KM+ G+ PN +TT++D Y
Sbjct: 512 ELFEEMQERGYLPCPTTYNIMINSLGEQEKWDEVKILLGKMQSQGLLPNVVTYTTLVDIY 571
Query: 422 GKNKDFDSAVVWYKEMESCGFPPDQKAKNILLS 454
G + F+ A+ + M+S G P N L++
Sbjct: 572 GHSGRFNDAIDCLEAMKSAGLKPSATMYNALIN 604
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 114/218 (52%), Gaps = 6/218 (2%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
LI + K G ++A ++ M ++GY P ++ ++ + G ++ + + +MQS G
Sbjct: 497 LIDCHRKHGYHDRAAELFEEMQERGYLPCPTTYNIMINSLGEQEKWDEVKILLGKMQSQG 556
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
P+ +TY ++ ++ + +F +A + + + + LKP M++ +I + + G E
Sbjct: 557 LLPNVVTYTTLVDIYGHSGRFNDAIDCLEAM---KSAGLKPSATMYNALINAFAQRGLSE 613
Query: 222 KARKLFALMAERGVQQSTVTYNSLM-SFETNYKEVS--KIYDQMQRAGLQPDVVSYALLI 278
+A + +M G++ S + NSL+ +F + +++ I M+ ++PDVV+Y L+
Sbjct: 614 QAVNAYRVMISDGLRPSLLALNSLINAFGEDRRDIEAFSILQYMKENDVKPDVVTYTTLM 673
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAF 316
A + + ++ AV+EEM+ +G P KA +L A
Sbjct: 674 KALIRVDKFDKVPAVYEEMILSGCTPDGKARAMLRSAL 711
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 47/189 (24%), Positives = 95/189 (50%), Gaps = 6/189 (3%)
Query: 101 MLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSS 160
++I + G+Q +++ + +L M +G P+VV++T L++ YG GR+ +A M+S+
Sbjct: 531 IMINSLGEQEKWDEVKILLGKMQSQGLLPNVVTYTTLVDIYGHSGRFNDAIDCLEAMKSA 590
Query: 161 GPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGY 220
G +PSA Y ++ F + ++A + ++ + L+P + +I + +
Sbjct: 591 GLKPSATMYNALINAFAQRGLSEQAVNAYRVMISDG---LRPSLLALNSLINAFGEDRRD 647
Query: 221 EKARKLFALMAERGVQQSTVTYNSLMSFET---NYKEVSKIYDQMQRAGLQPDVVSYALL 277
+A + M E V+ VTY +LM + +V +Y++M +G PD + A+L
Sbjct: 648 IEAFSILQYMKENDVKPDVVTYTTLMKALIRVDKFDKVPAVYEEMILSGCTPDGKARAML 707
Query: 278 INAYGKARR 286
+A +R
Sbjct: 708 RSALRYMKR 716
>gi|152717462|dbj|BAF73723.1| pentatricopeptide repeat protein [Raphanus sativus]
Length = 687
Score = 152 bits (384), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 116/483 (24%), Positives = 215/483 (44%), Gaps = 55/483 (11%)
Query: 48 LRSERTRGQPLPKDL----VLGTLVRL----------KQLKKWNVVSEVLEW-LRIQSWW 92
L S+ R +PLP + ++G +VR+ +++++ + ++ + + I+ +
Sbjct: 66 LFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFTILIKCFC 125
Query: 93 DFNEMDFLMLITAYGKQGDFNKAEKVLSF----------------------MNKKGYAPS 130
+++ F + + +GK V++F M + P+
Sbjct: 126 SCSKLPFAL--STFGKITKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFHQMFETTCRPN 183
Query: 131 VVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFM 190
VV+ T LM R GR A A+ RM G +P+ +TY I+ + A ++
Sbjct: 184 VVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKIGDTVSALDLLR 243
Query: 191 TLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLM-SFE 249
+ EE S + P+ ++ +I K G + A+ LF M E+G+ TYNS++ F
Sbjct: 244 KM--EEISHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFC 301
Query: 250 TN--YKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHK 307
++ + + ++ +M + PDVV+Y LINA+ K + EA +++EML G+ P
Sbjct: 302 SSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTI 361
Query: 308 AYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRL 367
Y+ ++D F +D A +F M CSP++ ++ T++ Y A ++ + +
Sbjct: 362 TYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEM 421
Query: 368 KQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDF 427
+ G V + TY TLI G+ V +L +++ +M +G+ P+ T++D N
Sbjct: 422 TETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKL 481
Query: 428 DSAVVWYKEMESC-----------GFPPDQKAKNILLSLAKTADERNEANELLGNFNHPN 476
A+ +K M+ G PD + NIL+S + EA EL H
Sbjct: 482 KDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRG 541
Query: 477 NEP 479
P
Sbjct: 542 IVP 544
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 112/441 (25%), Positives = 208/441 (47%), Gaps = 28/441 (6%)
Query: 35 MNQIEEVGSAVAVLRSERTRGQPLPKDLVLGTLVRL-----KQLKKWNVVSEVLEWLRIQ 89
M +I + SA+ +LR +P ++ ++ + N+ +E+ E
Sbjct: 229 MCKIGDTVSALDLLRKMEEISHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFP 288
Query: 90 SWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKN 149
+ +N M I + G ++ AE++L M ++ +P VV++ AL+ A+ + G++
Sbjct: 289 DLFTYNSM-----IVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFE 343
Query: 150 AEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHM 209
AE ++ M G P+ +TY ++ F + N+ AE +F + + SP + F+
Sbjct: 344 AEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSP---NLITFNT 400
Query: 210 MIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSKIYDQMQR---AG 266
+I Y A + +L M E G+ T TYN+L+ +++ D +Q +G
Sbjct: 401 LIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSG 460
Query: 267 LQPDVVSYALLINAYGKARREEEALAVFEEM------LDA-----GVRPTHKAYNILLDA 315
L PD+V+ L++ + ++AL +F+ M LDA GV P + YNIL+
Sbjct: 461 LCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISG 520
Query: 316 FAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPN 375
G +A +++ M PD +Y++M+ S ++ A + F + F PN
Sbjct: 521 LINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPN 580
Query: 376 VITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYK 435
V+T+ TLI GY K ++ +E++ +M GI N + T++ + K + + A+ ++
Sbjct: 581 VVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQ 640
Query: 436 EMESCGFPPDQ-KAKNILLSL 455
EM S G PD +N+L L
Sbjct: 641 EMISSGVYPDTITIRNMLTGL 661
Score = 135 bits (341), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 82/351 (23%), Positives = 173/351 (49%), Gaps = 17/351 (4%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
LI A+ K+G F +AE++ M +G P+ ++++++++ + + R AE +F M + G
Sbjct: 331 LINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKG 390
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
P+ +T+ ++ + A + + E+ L + ++ L D ++ +I+ + G
Sbjct: 391 CSPNLITFNTLIDGYCGAKRIDDGMEL---LHEMTETGLVADTTTYNTLIHGFYLVGDLN 447
Query: 222 KARKLFALMAERGVQQSTVTYNSLMSFETN---YKEVSKIYDQMQRA-----------GL 267
A L M G+ VT ++L+ + K+ +++ MQ++ G+
Sbjct: 448 AALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGV 507
Query: 268 QPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQART 327
+PDV +Y +LI+ + EA ++EEM G+ P Y+ ++D +D+A
Sbjct: 508 EPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQ 567
Query: 328 VFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYA 387
+F M SP++ ++TT+++ Y A ++ + F + + G V N ITY TLI G+
Sbjct: 568 MFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICGFR 627
Query: 388 KVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEME 438
KV N+ ++I+ +M +G+ P+ ++ ++ AV ++++
Sbjct: 628 KVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRAVAMLEKLQ 678
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 65/260 (25%), Positives = 121/260 (46%), Gaps = 4/260 (1%)
Query: 214 YKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKE---VSKIYDQMQRAGLQPD 270
+ + G E A LF+ M S V + LM + V +Y +M+R ++ D
Sbjct: 54 FHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCD 113
Query: 271 VVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFK 330
+ S+ +LI + + AL+ F ++ G+ P +N LL + V +A +F
Sbjct: 114 IYSFTILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFH 173
Query: 331 CMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVN 390
M C P++ ++TT+++ + A R+ +DG P ITYGT++ G K+
Sbjct: 174 QMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKIG 233
Query: 391 NLEKMMEIYDKM-RVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAK 449
+ +++ KM ++ I PN I++ I+D+ K+ A + EM+ G PD
Sbjct: 234 DTVSALDLLRKMEEISHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTY 293
Query: 450 NILLSLAKTADERNEANELL 469
N ++ ++ ++A +LL
Sbjct: 294 NSMIVGFCSSGRWSDAEQLL 313
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 69/325 (21%), Positives = 141/325 (43%), Gaps = 17/325 (5%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + + +I + KQ + AE + M KG +P++++ L++ Y R + +
Sbjct: 359 NTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELL 418
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
M +G TY ++ F A ++ ++ S L PD ++
Sbjct: 419 HEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMI---SSGLCPDIVTCDTLLDGL 475
Query: 215 KKAGGYEKARKLFALMAER-----------GVQQSTVTYNSLMSFETN---YKEVSKIYD 260
G + A ++F +M + GV+ TYN L+S N + E ++Y+
Sbjct: 476 CDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYE 535
Query: 261 QMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISG 320
+M G+ PD ++Y+ +I+ K R +EA +F+ M P + L++ + +G
Sbjct: 536 EMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAG 595
Query: 321 MVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYG 380
VD +F M R + +Y T++ + ++ GA F+ + G P+ IT
Sbjct: 596 RVDDGLELFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISSGVYPDTITIR 655
Query: 381 TLIKGYAKVNNLEKMMEIYDKMRVN 405
++ G L++ + + +K++++
Sbjct: 656 NMLTGLWSKEELKRAVAMLEKLQMS 680
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/171 (18%), Positives = 81/171 (47%), Gaps = 3/171 (1%)
Query: 101 MLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSS 160
+LI+ +G F +AE++ M +G P ++++++++ + R A +F M S
Sbjct: 516 ILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSK 575
Query: 161 GPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGY 220
P+ +T+ ++ + +A + + E+F + + + + + +I ++K G
Sbjct: 576 SFSPNVVTFTTLINGYCKAGRVDDGLELFCEM---GRRGIVANAITYITLICGFRKVGNI 632
Query: 221 EKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSKIYDQMQRAGLQPDV 271
A +F M GV T+T ++++ + +E+ + +++ + D+
Sbjct: 633 NGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRAVAMLEKLQMSMDL 683
>gi|255661142|gb|ACU25740.1| pentatricopeptide repeat-containing protein [Verbena canescens]
Length = 426
Score = 152 bits (384), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 98/374 (26%), Positives = 183/374 (48%), Gaps = 37/374 (9%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
LI K D++KA + S + + G+ P +V++ A++ +G+ ++ A ++ M+++G
Sbjct: 50 LIELSRKLCDYSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMRTAG 109
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
P+ +Y +L ++VE KF EA VF + E K L D ++MI +Y + G +
Sbjct: 110 VTPTTASYSTLLTMYVENKKFLEALSVFAEM-REIKCLL--DLTTCNIMIDVYGQLGMAK 166
Query: 222 KARKLFALMAERGVQQSTVTYNSLMSFETN---YKEVSKIYDQMQRAGLQPDVVSYALLI 278
+A KLF M + G++ + V+YN+L+ + + E ++ MQR ++ +VV+Y ++
Sbjct: 167 EADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMM 226
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCS 338
YGK E+A + +EM + G+ P Y+ ++ + G +D+A +F+ +R
Sbjct: 227 MIYGKTLEHEKANNLIQEMQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVD 286
Query: 339 PDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVP------------------------ 374
D Y TM+ AY A + A++ LK+ +P
Sbjct: 287 IDQVLYQTMIVAYERAGLVAHAKRLLHELKRPDNIPRDIAIHILAGAGRIEEATWVFRQA 346
Query: 375 -------NVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDF 427
++ + +I ++K ++E++DKMR G P+ + I++AYGK +F
Sbjct: 347 IDAGEVKDITVFERMIHLFSKYKKYGNVVEVFDKMRGLGYFPDSNVIALILNAYGKLHEF 406
Query: 428 DSAVVWYKEMESCG 441
D A Y EM+ G
Sbjct: 407 DKANDVYMEMQEVG 420
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 86/318 (27%), Positives = 147/318 (46%), Gaps = 38/318 (11%)
Query: 200 LKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFE---TNYKEVS 256
L PD+ + +I + K G ++ A M + V V Y++L+ +Y +
Sbjct: 5 LSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDYSKAI 64
Query: 257 KIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAF 316
I+ +++R+G PD+V+Y +IN +GKA+ EA ++ EM AGV PT +Y+ LL +
Sbjct: 65 SIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVTPTTASYSTLLTMY 124
Query: 317 AISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNV 376
+ +A +VF MR +C D+ + M+ Y + A+K F +++ G PNV
Sbjct: 125 VENKKFLEALSVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNV 184
Query: 377 ITYGTLIKGYA---------------KVNNLEK-------MMEIYDK------------- 401
++Y TL++ Y + N+E+ MM IY K
Sbjct: 185 VSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLIQE 244
Query: 402 MRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADE 461
M+ GI+PN ++TI+ +GK D A + ++++ S G DQ ++ + A
Sbjct: 245 MQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVDIDQVLYQTMIVAYERAGL 304
Query: 462 RNEANELLGNFNHPNNEP 479
A LL P+N P
Sbjct: 305 VAHAKRLLHELKRPDNIP 322
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 78/181 (43%)
Query: 301 GVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGA 360
+ P Y+ L+ F G+ D A + + M +DR D+ Y+ ++ D A
Sbjct: 4 ALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDYSKA 63
Query: 361 EKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDA 420
F RLK+ GF P+++ Y +I + K + + +MR G+ P ++T++
Sbjct: 64 ISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVTPTTASYSTLLTM 123
Query: 421 YGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPG 480
Y +NK F A+ + EM D NI++ + EA++L EP
Sbjct: 124 YVENKKFLEALSVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPN 183
Query: 481 I 481
+
Sbjct: 184 V 184
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/244 (22%), Positives = 114/244 (46%), Gaps = 6/244 (2%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + + L+ YG F +A + M +K +VV++ ++M YG+ ++ A +
Sbjct: 183 NVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLI 242
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
+ MQ+ G P+++TY I+ ++ + K A +F L S + DQ ++ MI Y
Sbjct: 243 QEMQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKL---RSSGVDIDQVLYQTMIVAY 299
Query: 215 KKAGGYEKARKLFA-LMAERGVQQSTVTYNSLMSFETNYKEVSKIYDQMQRAGLQPDVVS 273
++AG A++L L + + + +++ +E + ++ Q AG D+
Sbjct: 300 ERAGLVAHAKRLLHELKRPDNIPRDIAIH--ILAGAGRIEEATWVFRQAIDAGEVKDITV 357
Query: 274 YALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMR 333
+ +I+ + K ++ + VF++M G P ++L+A+ D+A V+ M+
Sbjct: 358 FERMIHLFSKYKKYGNVVEVFDKMRGLGYFPDSNVIALILNAYGKLHEFDKANDVYMEMQ 417
Query: 334 RDRC 337
C
Sbjct: 418 EVGC 421
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/123 (22%), Positives = 63/123 (51%)
Query: 333 RRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNL 392
R SPD +Y+T+++ + + A + ++++QD +++ Y LI+ K+ +
Sbjct: 1 RERALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDY 60
Query: 393 EKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNIL 452
K + I+ +++ +G P+ + +++ +GK K F A EM + G P + + L
Sbjct: 61 SKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVTPTTASYSTL 120
Query: 453 LSL 455
L++
Sbjct: 121 LTM 123
>gi|410110071|gb|AFV61115.1| pentatricopeptide repeat-containing protein 123, partial [Aloysia
macrostachya]
Length = 437
Score = 152 bits (384), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 102/388 (26%), Positives = 188/388 (48%), Gaps = 37/388 (9%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
LI K D++KA + S + + G+ P +V++ A++ +G+ ++ A ++ M+++G
Sbjct: 53 LIELSRKLCDYSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMRTAG 112
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
P+ +Y +L ++VE KF EA VF + + E K L D ++MI +Y + G +
Sbjct: 113 VMPNTASYSTLLTMYVENKKFLEALSVF-SEMREIKCLL--DLTTCNIMIDVYGQLGMAK 169
Query: 222 KARKLFALMAERGVQQSTVTYNSLMSFETN---YKEVSKIYDQMQRAGLQPDVVSYALLI 278
+A KLF M + G++ + V+YN+L+ + + E ++ MQR + +VV+Y ++
Sbjct: 170 EADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFXLMQRKNIVQNVVTYNSMM 229
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCS 338
YGK E+A + +EM + G+ P Y+ ++ + G +D+A +F+ +R
Sbjct: 230 MIYGKTLEHEKANNLIQEMQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVE 289
Query: 339 PDICSYTTMLSAY-------------------------------VNASDMEGAEKFFRRL 367
D Y TM+ AY A +E A FR+
Sbjct: 290 IDQVLYQTMIVAYERAGLVAHAKRLLHELKSPDNIPRDTAIHILAGAGRIEEATYVFRQA 349
Query: 368 KQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDF 427
G V +++ + +I ++K ++E++DKMR G P+ + +++AYGK +F
Sbjct: 350 IDAGEVKDIMVFERMIHLFSKYKKYANVVEVFDKMRGLGYFPDSNVIALVLNAYGKLHEF 409
Query: 428 DSAVVWYKEMESCGFPPDQKAKNILLSL 455
D A Y EM+ G + +LSL
Sbjct: 410 DKANGVYMEMQEVGCVFSDEVHFQMLSL 437
Score = 126 bits (316), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 84/318 (26%), Positives = 142/318 (44%), Gaps = 38/318 (11%)
Query: 200 LKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFE---TNYKEVS 256
L PD+ + +I + K G ++ A M + V V Y++L+ +Y +
Sbjct: 8 LSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDYSKAI 67
Query: 257 KIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAF 316
I+ +++R+G PD+V+Y +IN +GKA+ EA ++ EM AGV P +Y+ LL +
Sbjct: 68 SIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVMPNTASYSTLLTMY 127
Query: 317 AISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNV 376
+ +A +VF MR +C D+ + M+ Y + A+K F +++ G PNV
Sbjct: 128 VENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNV 187
Query: 377 ITYGTLIKGYA----------------------KVNNLEKMMEIYDK------------- 401
++Y TL++ Y V MM IY K
Sbjct: 188 VSYNTLLRVYGDAELFGEAIHLFXLMQRKNIVQNVVTYNSMMMIYGKTLEHEKANNLIQE 247
Query: 402 MRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADE 461
M+ GI+PN ++TI+ +GK D A + ++++ S G DQ ++ + A
Sbjct: 248 MQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQVLYQTMIVAYERAGL 307
Query: 462 RNEANELLGNFNHPNNEP 479
A LL P+N P
Sbjct: 308 VAHAKRLLHELKSPDNIP 325
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 47/187 (25%), Positives = 82/187 (43%)
Query: 295 EEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNA 354
+EM + P Y+ L+ F G+ D A + + M +DR D+ Y+ ++
Sbjct: 1 DEMRQRALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKL 60
Query: 355 SDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIF 414
D A F RLK+ GF P+++ Y +I + K + + +MR G+ PN +
Sbjct: 61 CDYSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVMPNTASY 120
Query: 415 TTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNH 474
+T++ Y +NK F A+ + EM D NI++ + EA++L
Sbjct: 121 STLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRK 180
Query: 475 PNNEPGI 481
EP +
Sbjct: 181 MGIEPNV 187
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 56/244 (22%), Positives = 118/244 (48%), Gaps = 6/244 (2%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + + L+ YG F +A + M +K +VV++ ++M YG+ ++ A +
Sbjct: 186 NVVSYNTLLRVYGDAELFGEAIHLFXLMQRKNIVQNVVTYNSMMMIYGKTLEHEKANNLI 245
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
+ MQ+ G P+++TY I+ ++ + K A +F L S ++ DQ ++ MI Y
Sbjct: 246 QEMQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKL---RSSGVEIDQVLYQTMIVAY 302
Query: 215 KKAGGYEKARKLFA-LMAERGVQQSTVTYNSLMSFETNYKEVSKIYDQMQRAGLQPDVVS 273
++AG A++L L + + + T + +++ +E + ++ Q AG D++
Sbjct: 303 ERAGLVAHAKRLLHELKSPDNIPRDTAIH--ILAGAGRIEEATYVFRQAIDAGEVKDIMV 360
Query: 274 YALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMR 333
+ +I+ + K ++ + VF++M G P ++L+A+ D+A V+ M+
Sbjct: 361 FERMIHLFSKYKKYANVVEVFDKMRGLGYFPDSNVIALVLNAYGKLHEFDKANGVYMEMQ 420
Query: 334 RDRC 337
C
Sbjct: 421 EVGC 424
>gi|226528493|ref|NP_001147073.1| ATP binding protein [Zea mays]
gi|195607078|gb|ACG25369.1| ATP binding protein [Zea mays]
Length = 655
Score = 152 bits (384), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 111/470 (23%), Positives = 216/470 (45%), Gaps = 21/470 (4%)
Query: 13 RRKVEVFKD-----AADEAGKKNWRRLMNQIEEVGS---AVAVLRSERTRGQPLPKDLVL 64
R V V +D A + G N ++N I + GS A+ +LR + G D+V
Sbjct: 174 RSAVRVLEDLHARGCALDVGNCNL--VLNAICDQGSVDKALHLLRDLPSFG--CEPDVVS 229
Query: 65 --GTLVRLKQLKKWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFM 122
L L K+W V E++E + ++ N + F LI+ + G F + +VL+ M
Sbjct: 230 YNAVLKGLCMAKRWGCVQELMEEM-VRMACPPNIVTFNTLISYLCRNGLFERVHEVLAQM 288
Query: 123 NKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKF 182
+ G P + + +++ + G K A I RM S G +P+ + Y +LK A ++
Sbjct: 289 AEHGCTPDIRMYATIIDGICKEGHLKVAHEILNRMPSYGLKPNVVCYNTLLKGLCSAERW 348
Query: 183 KEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTY 242
+E EE+ + D++ PL D F++++ + + G ++ +L M G +TY
Sbjct: 349 EETEELLAEMFDKD-CPL--DDVTFNILVDFFCQNGLVDRVIELLEQMLVHGCMPDVITY 405
Query: 243 NSLM---SFETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLD 299
+++ E E + M G +P+ +SY +++ A R +A + +M+
Sbjct: 406 TTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIVLKGLCSAERWVDAEDLMSQMIQ 465
Query: 300 AGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEG 359
G +N L++ G+V+QA + K M + CSPD+ SY+T++ A +
Sbjct: 466 QGCPLNPITFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTDE 525
Query: 360 AEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMD 419
A + + G PN I Y ++ ++ + K+++++D ++ I+ + ++ ++
Sbjct: 526 ALELLNVMVNKGMSPNTIIYSSIASALSREGRINKVIQMFDNIQDTTIRSDAVLYNAVIS 585
Query: 420 AYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELL 469
+ K + + A+ + M S G P++ IL+ + EA E+L
Sbjct: 586 SLCKRGETERAIEFLAYMVSSGCVPNESTYTILIRGLASEGFVKEAQEML 635
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 98/412 (23%), Positives = 174/412 (42%), Gaps = 44/412 (10%)
Query: 101 MLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSS 160
+++ A + G F A +VL ++ +G A V + ++ A G A + R + S
Sbjct: 162 VILEAACRGGGFRSAVRVLEDLHARGCALDVGNCNLVLNAICDQGSVDKALHLLRDLPSF 221
Query: 161 GPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGY 220
G P ++Y +LK A ++ +E+ ++ + P+ F+ +I + G +
Sbjct: 222 GCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMV---RMACPPNIVTFNTLISYLCRNGLF 278
Query: 221 EKARKLFALMAERGVQQSTVTYNSLM---SFETNYKEVSKIYDQMQRAGLQPDVVSYALL 277
E+ ++ A MAE G Y +++ E + K +I ++M GL+P+VV Y L
Sbjct: 279 ERVHEVLAQMAEHGCTPDIRMYATIIDGICKEGHLKVAHEILNRMPSYGLKPNVVCYNTL 338
Query: 278 INAYGKARREEE-----------------------------------ALAVFEEMLDAGV 302
+ A R EE + + E+ML G
Sbjct: 339 LKGLCSAERWEETEELLAEMFDKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLVHGC 398
Query: 303 RPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEK 362
P Y +++ F G++D+A + K M C P+ SYT +L +A AE
Sbjct: 399 MPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIVLKGLCSAERWVDAED 458
Query: 363 FFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYG 422
++ Q G N IT+ TLI K +E+ +E+ +M VNG P+ ++T++D G
Sbjct: 459 LMSQMIQQGCPLNPITFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLG 518
Query: 423 KNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNH 474
K D A+ M + G P+ I S+A N+++ F++
Sbjct: 519 KAGKTDEALELLNVMVNKGMSPNTI---IYSSIASALSREGRINKVIQMFDN 567
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 75/352 (21%), Positives = 158/352 (44%), Gaps = 43/352 (12%)
Query: 59 PKDLVLGTLVR-LKQLKKWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEK 117
P + TL++ L ++W E+L + +++ F +L+ + + G ++ +
Sbjct: 330 PNVVCYNTLLKGLCSAERWEETEELLAEM-FDKDCPLDDVTFNILVDFFCQNGLVDRVIE 388
Query: 118 VLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFV 177
+L M G P V+++T ++ + + G A + + M + G +P+ ++Y I+LK
Sbjct: 389 LLEQMLVHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIVLKGLC 448
Query: 178 EANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQ 237
A ++ +AE+ M+ + ++ PL P
Sbjct: 449 SAERWVDAED-LMSQMIQQGCPLNP----------------------------------- 472
Query: 238 STVTYNSLMSFETN---YKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVF 294
+T+N+L++F ++ ++ QM G PD++SY+ +I+ GKA + +EAL +
Sbjct: 473 --ITFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTDEALELL 530
Query: 295 EEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNA 354
M++ G+ P Y+ + A + G +++ +F ++ D Y ++S+
Sbjct: 531 NVMVNKGMSPNTIIYSSIASALSREGRINKVIQMFDNIQDTTIRSDAVLYNAVISSLCKR 590
Query: 355 SDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNG 406
+ E A +F + G VPN TY LI+G A +++ E+ ++ G
Sbjct: 591 GETERAIEFLAYMVSSGCVPNESTYTILIRGLASEGFVKEAQEMLTELCSKG 642
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/267 (24%), Positives = 113/267 (42%), Gaps = 6/267 (2%)
Query: 207 FHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSL---MSFETNYKEVSKIYDQMQ 263
++ M+ Y +AG E AR+L A + V + TY + + + + D+M
Sbjct: 93 YNAMVAGYCRAGQLESARRLAAAVP---VPPNAYTYFPVVRALCARGRIADALAVLDEMP 149
Query: 264 RAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVD 323
R G P Y +++ A + A+ V E++ G N++L+A G VD
Sbjct: 150 RRGCAPIPPMYHVILEAACRGGGFRSAVRVLEDLHARGCALDVGNCNLVLNAICDQGSVD 209
Query: 324 QARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLI 383
+A + + + C PD+ SY +L A ++ + + PN++T+ TLI
Sbjct: 210 KALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTLI 269
Query: 384 KGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFP 443
+ E++ E+ +M +G P+ ++ TI+D K A M S G
Sbjct: 270 SYLCRNGLFERVHEVLAQMAEHGCTPDIRMYATIIDGICKEGHLKVAHEILNRMPSYGLK 329
Query: 444 PDQKAKNILLSLAKTADERNEANELLG 470
P+ N LL +A+ E ELL
Sbjct: 330 PNVVCYNTLLKGLCSAERWEETEELLA 356
Score = 43.1 bits (100), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 33/139 (23%), Positives = 59/139 (42%), Gaps = 5/139 (3%)
Query: 344 YTTMLSAYVNASDMEGAEKFFRRLKQDGFVP-NVITYGTLIKGYAKVNNLEKMMEIYDKM 402
Y M++ Y A +E A RRL VP N TY +++ + + + D+M
Sbjct: 93 YNAMVAGYCRAGQLESA----RRLAAAVPVPPNAYTYFPVVRALCARGRIADALAVLDEM 148
Query: 403 RVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADER 462
G P ++ I++A + F SAV +++ + G D N++L+
Sbjct: 149 PRRGCAPIPPMYHVILEAACRGGGFRSAVRVLEDLHARGCALDVGNCNLVLNAICDQGSV 208
Query: 463 NEANELLGNFNHPNNEPGI 481
++A LL + EP +
Sbjct: 209 DKALHLLRDLPSFGCEPDV 227
>gi|9502386|gb|AAF88093.1|AC025417_21 T12C24.22 [Arabidopsis thaliana]
Length = 1245
Score = 152 bits (384), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 89/364 (24%), Positives = 179/364 (49%), Gaps = 6/364 (1%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
+I + + G + A + M KG SVV++ +L+ + G++ + + + M S
Sbjct: 224 IIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSRE 283
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
P+ +T+ ++L +FV+ K +EA E++ ++ + P+ ++ ++ Y
Sbjct: 284 IVPNVITFNVLLDVFVKEGKLQEANELYKEMITR---GISPNIITYNTLMDGYCMQNRLS 340
Query: 222 KARKLFALMAERGVQQSTVTYNSLMSFETNYKEVS---KIYDQMQRAGLQPDVVSYALLI 278
+A + LM VT+ SL+ K V K++ + + GL + V+Y++L+
Sbjct: 341 EANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILV 400
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCS 338
+ ++ + + A +F+EM+ GV P Y ILLD +G +++A +F+ +++ +
Sbjct: 401 QGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMD 460
Query: 339 PDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEI 398
I YTT++ +E A F L G PNV+TY +I G K +L + +
Sbjct: 461 LGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANIL 520
Query: 399 YDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKT 458
KM +G PN + T++ A+ ++ D ++ +EM+SCGF D + +++ + +
Sbjct: 521 LRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDMLLS 580
Query: 459 ADER 462
A +R
Sbjct: 581 AMKR 584
Score = 138 bits (348), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 105/475 (22%), Positives = 205/475 (43%), Gaps = 44/475 (9%)
Query: 44 AVAVLRSERTRGQPLPKDLVLGTLVR-LKQLKKWNVVSEVLEWLRIQSWWDFNEMDFLML 102
A+A+ + E R +PLP + + + K++N+V + + L + N ++
Sbjct: 62 AIALFQ-EMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIA-HNIYTLNIM 119
Query: 103 ITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGP 162
I + + A VL + K GY P + L++ G+ A + RM +G
Sbjct: 120 INCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGC 179
Query: 163 RPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEK 222
+P +TY I+ + A ++ + E+ +K D + +I + G +
Sbjct: 180 QPDVVTYNSIVNGICRSGDTSLALDLLRKM---EERNVKADVFTYSTIIDSLCRDGCIDA 236
Query: 223 ARKLFALMAERGVQQSTVTYNSL---MSFETNYKEVSKIYDQMQRAGLQPDVVSYALLIN 279
A LF M +G++ S VTYNSL + + + + + M + P+V+++ +L++
Sbjct: 237 AISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLD 296
Query: 280 AYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSP 339
+ K + +EA +++EM+ G+ P YN L+D + + + +A + M R++CSP
Sbjct: 297 VFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSP 356
Query: 340 DICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFV-------------------------- 373
DI ++T+++ Y ++ K FR + + G V
Sbjct: 357 DIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELF 416
Query: 374 ---------PNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKN 424
P+V+TYG L+ G LEK +EI++ ++ + + ++TTI++ K
Sbjct: 417 QEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKG 476
Query: 425 KDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEP 479
+ A + + G P+ +++S +EAN LL N P
Sbjct: 477 GKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAP 531
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 71/336 (21%), Positives = 158/336 (47%), Gaps = 9/336 (2%)
Query: 41 VGSAVAVLRSERTRGQPLPKDLVLGTLVR-LKQLKKWNVVSEVLEWLRIQSWWDFNEMDF 99
+ +A+++ + T+G + +LVR L + KWN + +L+ + + N + F
Sbjct: 234 IDAAISLFKEMETKGIK-SSVVTYNSLVRGLCKAGKWNDGALLLKDM-VSREIVPNVITF 291
Query: 100 LMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQS 159
+L+ + K+G +A ++ M +G +P+++++ LM+ Y R A + M
Sbjct: 292 NVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVR 351
Query: 160 SGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGG 219
+ P +T+ ++K + + + +VF + K L + + +++ + ++G
Sbjct: 352 NKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNI---SKRGLVANAVTYSILVQGFCQSGK 408
Query: 220 YEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSK---IYDQMQRAGLQPDVVSYAL 276
+ A +LF M GV +TY L+ + ++ K I++ +Q++ + +V Y
Sbjct: 409 IKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTT 468
Query: 277 LINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDR 336
+I K + E+A +F + GV+P Y +++ G + +A + + M D
Sbjct: 469 IIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDG 528
Query: 337 CSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGF 372
+P+ C+Y T++ A++ D+ + K +K GF
Sbjct: 529 NAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGF 564
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/232 (18%), Positives = 103/232 (44%)
Query: 258 IYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFA 317
++ +M R+ P +V ++ +A + ++ L +++ G+ NI+++ F
Sbjct: 65 LFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIMINCFC 124
Query: 318 ISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVI 377
A +V + + PD ++ T++ + A R+ ++G P+V+
Sbjct: 125 RCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVV 184
Query: 378 TYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEM 437
TY +++ G + + +++ KM +K + ++TI+D+ ++ D+A+ +KEM
Sbjct: 185 TYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEM 244
Query: 438 ESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGINGLSISVD 489
E+ G N L+ A + N+ LL + P + ++ +D
Sbjct: 245 ETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLD 296
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 70/342 (20%), Positives = 137/342 (40%), Gaps = 42/342 (12%)
Query: 81 EVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEA 140
E+ E L+ +S D + + +I K G A + + KG P+V+++T ++
Sbjct: 449 EIFEDLQ-KSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISG 507
Query: 141 YGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSP- 199
+ G A + R+M+ G P+ TY +++ + + + L++E KS
Sbjct: 508 LCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAK----LIEEMKSCG 563
Query: 200 LKPDQKMFHMMIYM-----------YKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSF 248
D M+I M Y + G + + L L ++ S++T+ + F
Sbjct: 564 FSADASSIKMVIDMLLSAMKRLTLRYCLSKGSKSRQDLLELSGSEKIRLSSLTFVKM--F 621
Query: 249 ETNYKEVSKIYDQMQRAGLQPDVVSYALL----INAYGKARREEEALAVFEEMLDAGVRP 304
N S + ++ G+ ++ L + K + + + V E+L G+
Sbjct: 622 PCNTITTSLNVNTIEARGMNSAELNRDLRKLRRSSVLKKFKNRDVRVLVTNELLTWGLED 681
Query: 305 THKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFF 364
++++D + V A + R R T+++A E+
Sbjct: 682 AE--CDLMVDLELPTDAVHYAHRAGRMRRPGR-------KMTVVTA----------EELH 722
Query: 365 RRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNG 406
+ + Q G PN ITY +LI G+ K N L++ ++ D M G
Sbjct: 723 KEMIQRGIAPNTITYSSLIDGFCKENRLDEANQMLDLMVTKG 764
>gi|410110079|gb|AFV61119.1| pentatricopeptide repeat-containing protein 123, partial [Junellia
succulentifolia]
Length = 382
Score = 152 bits (384), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 99/374 (26%), Positives = 183/374 (48%), Gaps = 37/374 (9%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
LI K D++KA + S + + G+ P +V++ A++ +G+ +++A ++ M+++G
Sbjct: 11 LIELSRKLCDYSKAISIFSRLKRSGFMPDLVAYNAMINVFGKAKLFRDARSLISEMRTAG 70
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
P+ +Y +L ++VE KF EA VF + E K L D ++MI +Y + G +
Sbjct: 71 VTPNTASYSTLLTMYVENKKFLEALSVFAEM-REIKCLL--DLTTCNIMIDVYGQLGMAK 127
Query: 222 KARKLFALMAERGVQQSTVTYNSLMSFETN---YKEVSKIYDQMQRAGLQPDVVSYALLI 278
+A KLF M + G++ + V+YN+L+ + + E ++ MQR ++ +VV+Y ++
Sbjct: 128 EADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMM 187
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCS 338
YGK E+A + +EM + G+ P Y+ ++ + G +D+A +F+ +R
Sbjct: 188 MIYGKTLEHEKANNLIQEMQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVD 247
Query: 339 PDICSYTTMLSAY-------------------------------VNASDMEGAEKFFRRL 367
D Y TM+ AY A +E A FR+
Sbjct: 248 IDQVLYQTMIVAYERAGLVAHAKRLLHELKRPDNIPRDIAIHILAGAGRIEEATWVFRQA 307
Query: 368 KQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDF 427
G V ++ + +I ++K ++E++DKMR G P+ + +++AYGK +F
Sbjct: 308 IDAGXVKDITVFERMIHLFSKYKKYGNVVEVFDKMRGLGYFPDSNVIALVLNAYGKLHEF 367
Query: 428 DSAVVWYKEMESCG 441
D A Y EM+ G
Sbjct: 368 DKANDVYMEMQEVG 381
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 75/280 (26%), Positives = 136/280 (48%), Gaps = 3/280 (1%)
Query: 203 DQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSF---ETNYKEVSKIY 259
D ++ +I + +K Y KA +F+ + G V YN++++ +++ +
Sbjct: 4 DLVLYSNLIELSRKLCDYSKAISIFSRLKRSGFMPDLVAYNAMINVFGKAKLFRDARSLI 63
Query: 260 DQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAIS 319
+M+ AG+ P+ SY+ L+ Y + ++ EAL+VF EM + NI++D +
Sbjct: 64 SEMRTAGVTPNTASYSTLLTMYVENKKFLEALSVFAEMREIKCLLDLTTCNIMIDVYGQL 123
Query: 320 GMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITY 379
GM +A +F MR+ P++ SY T+L Y +A A FR +++ NV+TY
Sbjct: 124 GMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTY 183
Query: 380 GTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMES 439
+++ Y K EK + +M+ GI+PN ++TI+ +GK D A + ++++ S
Sbjct: 184 NSMMMIYGKTLEHEKANNLIQEMQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRS 243
Query: 440 CGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEP 479
G DQ ++ + A A LL P+N P
Sbjct: 244 SGVDIDQVLYQTMIVAYERAGLVAHAKRLLHELKRPDNIP 283
Score = 78.6 bits (192), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 55/244 (22%), Positives = 114/244 (46%), Gaps = 6/244 (2%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + + L+ YG F +A + M +K +VV++ ++M YG+ ++ A +
Sbjct: 144 NVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLI 203
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
+ MQ+ G P+++TY I+ ++ + K A +F L S + DQ ++ MI Y
Sbjct: 204 QEMQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKL---RSSGVDIDQVLYQTMIVAY 260
Query: 215 KKAGGYEKARKLFA-LMAERGVQQSTVTYNSLMSFETNYKEVSKIYDQMQRAGLQPDVVS 273
++AG A++L L + + + +++ +E + ++ Q AG D+
Sbjct: 261 ERAGLVAHAKRLLHELKRPDNIPRDIAIH--ILAGAGRIEEATWVFRQAIDAGXVKDITV 318
Query: 274 YALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMR 333
+ +I+ + K ++ + VF++M G P ++L+A+ D+A V+ M+
Sbjct: 319 FERMIHLFSKYKKYGNVVEVFDKMRGLGYFPDSNVIALVLNAYGKLHEFDKANDVYMEMQ 378
Query: 334 RDRC 337
C
Sbjct: 379 EVGC 382
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/142 (24%), Positives = 62/142 (43%)
Query: 340 DICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIY 399
D+ Y+ ++ D A F RLK+ GF+P+++ Y +I + K +
Sbjct: 4 DLVLYSNLIELSRKLCDYSKAISIFSRLKRSGFMPDLVAYNAMINVFGKAKLFRDARSLI 63
Query: 400 DKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTA 459
+MR G+ PN ++T++ Y +NK F A+ + EM D NI++ +
Sbjct: 64 SEMRTAGVTPNTASYSTLLTMYVENKKFLEALSVFAEMREIKCLLDLTTCNIMIDVYGQL 123
Query: 460 DERNEANELLGNFNHPNNEPGI 481
EA++L EP +
Sbjct: 124 GMAKEADKLFWGMRKMGIEPNV 145
>gi|302772597|ref|XP_002969716.1| hypothetical protein SELMODRAFT_92207 [Selaginella moellendorffii]
gi|300162227|gb|EFJ28840.1| hypothetical protein SELMODRAFT_92207 [Selaginella moellendorffii]
Length = 457
Score = 152 bits (384), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 96/391 (24%), Positives = 185/391 (47%), Gaps = 8/391 (2%)
Query: 83 LEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYG 142
+W Q ++ + + L+ K G + + M G P+ ++ L+ +
Sbjct: 4 FQWAGSQVHYNHGTLSYNYLLEVLAKSGRCDHVYGTYNDMLGAGCVPNTYTYGYLLRSLC 63
Query: 143 RGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKP 202
+ R++ A ++FR M + G P+ +Y I++ K EA E+ ++D +P
Sbjct: 64 QAQRFEEARSVFRGMAAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGH---QP 120
Query: 203 DQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLM---SFETNYKEVSKIY 259
+ + ++ K G ++A LF+ M RG V YN L+ S + + E +++
Sbjct: 121 NVVTYGSLLSGLCKMGKLKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLF 180
Query: 260 DQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAIS 319
++M G P V +Y L++ + + ++F++ML G P +N LLD F
Sbjct: 181 EEMLEKGCIPTVFTYNSLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKM 240
Query: 320 GMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITY 379
G + +A +F MR C PD+ SY T++ + A++ R + + G P++++Y
Sbjct: 241 GDMVEAHRLFLEMRSLGCPPDVVSYNTLMRGMCSKGKPHEAQRLLREMIRSGVGPDIVSY 300
Query: 380 GTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMES 439
LI GY+K L+ ++++ ++ +G++P+ ++TI+D + +A V +K+M +
Sbjct: 301 NILIDGYSKSGALDHAIKLFYEIPKSGLEPDAFSYSTIIDCLCRAGKVGAAFVVFKDMIA 360
Query: 440 CGFPPDQKAKNILLSLAKTADER-NEANELL 469
G PD A I L + ER E+ EL
Sbjct: 361 NGSAPD-AAVVIPLVIGLCRGERLTESCELF 390
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 94/357 (26%), Positives = 169/357 (47%), Gaps = 10/357 (2%)
Query: 127 YAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAE 186
Y +S+ L+E + GR + + M +G P+ TY +L+ +A +F+EA
Sbjct: 13 YNHGTLSYNYLLEVLAKSGRCDHVYGTYNDMLGAGCVPNTYTYGYLLRSLCQAQRFEEAR 72
Query: 187 EVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLM 246
VF + + SP + + ++I + ++A +L M + G Q + VTY SL+
Sbjct: 73 SVFRGMAAQGCSP---NVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLL 129
Query: 247 SFETN---YKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVR 303
S KE ++ +M G PD V Y +LI+ + K EA +FEEML+ G
Sbjct: 130 SGLCKMGKLKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCI 189
Query: 304 PTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKF 363
PT YN LL F+ G + +++FK M R C P+I ++ +L + DM A +
Sbjct: 190 PTVFTYNSLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRL 249
Query: 364 FRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGK 423
F ++ G P+V++Y TL++G + + +M +G+ P+ + ++D Y K
Sbjct: 250 FLEMRSLGCPPDVVSYNTLMRGMCSKGKPHEAQRLLREMIRSGVGPDIVSYNILIDGYSK 309
Query: 424 NKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEA----NELLGNFNHPN 476
+ D A+ + E+ G PD + + ++ A + A +++ N + P+
Sbjct: 310 SGALDHAIKLFYEIPKSGLEPDAFSYSTIIDCLCRAGKVGAAFVVFKDMIANGSAPD 366
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 99/412 (24%), Positives = 187/412 (45%), Gaps = 8/412 (1%)
Query: 58 LPKDLVLGTLVR-LKQLKKWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAE 116
+P G L+R L Q +++ V + Q N + +LI + ++A
Sbjct: 49 VPNTYTYGYLLRSLCQAQRFEEARSVFRGMAAQGCSP-NVFSYSILIAGLCRGQKVDEAA 107
Query: 117 KVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLF 176
++L+ M G+ P+VV++ +L+ + G+ K A +F RM G P + Y +++ F
Sbjct: 108 ELLNEMIDGGHQPNVVTYGSLLSGLCKMGKLKEAVDLFSRMVYRGCPPDGVVYNVLIDGF 167
Query: 177 VEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQ 236
+ EA +F +L EK + P ++ ++ + + G + + + LF M +G
Sbjct: 168 SKKGDMGEAYRLFEEML--EKGCI-PTVFTYNSLLSGFSRKGEFGRVQSLFKDMLRQGCV 224
Query: 237 QSTVTYNSLMSFET---NYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAV 293
+ T+N+L+ + E +++ +M+ G PDVVSY L+ + EA +
Sbjct: 225 PNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSLGCPPDVVSYNTLMRGMCSKGKPHEAQRL 284
Query: 294 FEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVN 353
EM+ +GV P +YNIL+D ++ SG +D A +F + + PD SY+T++
Sbjct: 285 LREMIRSGVGPDIVSYNILIDGYSKSGALDHAIKLFYEIPKSGLEPDAFSYSTIIDCLCR 344
Query: 354 ASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTI 413
A + A F+ + +G P+ L+ G + L + E++ M P
Sbjct: 345 AGKVGAAFVVFKDMIANGSAPDAAVVIPLVIGLCRGERLTESCELFQAMVKFECVPLIPE 404
Query: 414 FTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEA 465
+ +M K K D + E+ GF PD + ++L + +D++ A
Sbjct: 405 YNLLMYKLCKAKRSDDVCEIFHELTERGFSPDVEISKVILETLRRSDDKEAA 456
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 72/286 (25%), Positives = 126/286 (44%), Gaps = 3/286 (1%)
Query: 207 FHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLM---SFETNYKEVSKIYDQMQ 263
++ ++ + K+G + + M G +T TY L+ ++E ++ M
Sbjct: 20 YNYLLEVLAKSGRCDHVYGTYNDMLGAGCVPNTYTYGYLLRSLCQAQRFEEARSVFRGMA 79
Query: 264 RAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVD 323
G P+V SY++LI + ++ +EA + EM+D G +P Y LL G +
Sbjct: 80 AQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKMGKLK 139
Query: 324 QARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLI 383
+A +F M C PD Y ++ + DM A + F + + G +P V TY +L+
Sbjct: 140 EAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYNSLL 199
Query: 384 KGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFP 443
G+++ ++ ++ M G PN F ++D + K D A + EM S G P
Sbjct: 200 SGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSLGCP 259
Query: 444 PDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGINGLSISVD 489
PD + N L+ + + +EA LL P I +I +D
Sbjct: 260 PDVVSYNTLMRGMCSKGKPHEAQRLLREMIRSGVGPDIVSYNILID 305
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 71/352 (20%), Positives = 152/352 (43%), Gaps = 20/352 (5%)
Query: 21 DAADEAGKKNWRRLMNQIEEVGS---AVAVLRSERTRGQPLPKDLVLGTLV-----RLKQ 72
D + + L++ + ++G AV + RG P P +V L+ +
Sbjct: 115 DGGHQPNVVTYGSLLSGLCKMGKLKEAVDLFSRMVYRGCP-PDGVVYNVLIDGFSKKGDM 173
Query: 73 LKKWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVV 132
+ + + E+LE I + + +N L++ + ++G+F + + + M ++G P++
Sbjct: 174 GEAYRLFEEMLEKGCIPTVFTYNS-----LLSGFSRKGEFGRVQSLFKDMLRQGCVPNIF 228
Query: 133 SHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTL 192
+ L++ + + G A +F M+S G P ++Y +++ K EA+ + +
Sbjct: 229 TFNNLLDGFCKMGDMVEAHRLFLEMRSLGCPPDVVSYNTLMRGMCSKGKPHEAQRLLREM 288
Query: 193 LDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNY 252
+ +S + PD ++++I Y K+G + A KLF + + G++ +Y++++
Sbjct: 289 I---RSGVGPDIVSYNILIDGYSKSGALDHAIKLFYEIPKSGLEPDAFSYSTIIDCLCRA 345
Query: 253 KEVSK---IYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAY 309
+V ++ M G PD L+ + R E+ +F+ M+ P Y
Sbjct: 346 GKVGAAFVVFKDMIANGSAPDAAVVIPLVIGLCRGERLTESCELFQAMVKFECVPLIPEY 405
Query: 310 NILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAE 361
N+L+ + D +F + SPD+ +L + D E AE
Sbjct: 406 NLLMYKLCKAKRSDDVCEIFHELTERGFSPDVEISKVILETLRRSDDKEAAE 457
>gi|356566887|ref|XP_003551657.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g62910-like [Glycine max]
Length = 525
Score = 152 bits (384), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 98/361 (27%), Positives = 170/361 (47%), Gaps = 5/361 (1%)
Query: 88 IQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRY 147
+ + F+E+ + LI K G A ++L M K G P+++ + +++ + G
Sbjct: 153 VSKGFSFDEVCYGTLINGLCKMGKTRDAIELLRKMEKGGVRPNLIMYNMVVDGLCKEGLV 212
Query: 148 KNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMF 207
A + M G TY ++ F A +F+ A + ++ +E ++PD F
Sbjct: 213 TEACGLCSEMVGKGICIDVFTYNSLIHGFCGAGQFQGAVRLLNEMVMKED--VRPDVYTF 270
Query: 208 HMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLM---SFETNYKEVSKIYDQMQR 264
++++ K G +AR +F LM +RG++ V+ N+LM E +++D+M
Sbjct: 271 NILVDALCKLGMVAEARNVFGLMIKRGLEPDVVSCNALMNGWCLRGCMSEAKEVFDRMVE 330
Query: 265 AGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQ 324
G P+V+SY+ LIN Y K + +EAL + EM + P YN LLD + SG V
Sbjct: 331 RGKLPNVISYSTLINGYCKVKMVDEALRLLTEMHQRNLVPDTVTYNCLLDGLSKSGRVLY 390
Query: 325 ARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIK 384
+ + MR +PD+ +Y +L Y+ ++ A F+ + G PN+ TY LI
Sbjct: 391 EWDLVEAMRASGQAPDLITYNVLLDDYLKRECLDKALALFQHIVDTGISPNIRTYNILID 450
Query: 385 GYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPP 444
G K ++ EI+ + V G +PN + +++ + D A EM GFPP
Sbjct: 451 GLCKGGRMKAAKEIFQLLSVKGCRPNIRTYNIMINGLRREGLLDEAEALLLEMVDDGFPP 510
Query: 445 D 445
+
Sbjct: 511 N 511
Score = 125 bits (313), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 95/439 (21%), Positives = 195/439 (44%), Gaps = 8/439 (1%)
Query: 56 QPLPKDLVLGTLVR-LKQLKKWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNK 114
P P + L L+ + + K + V + L + + + + I + G
Sbjct: 50 HPPPSIVSLNKLLSSIMKTKHYPTVVSLCSHLDSKGTPKPSLVTLSIFINSLTHLGQMGL 109
Query: 115 AEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILK 174
A V++ + K+G+ + T LM+ GR A ++ S G + Y ++
Sbjct: 110 AFSVMAKIVKRGFGVDPFTLTTLMKGLCLKGRTFEALNLYDHAVSKGFSFDEVCYGTLIN 169
Query: 175 LFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERG 234
+ K ++A E+ + EK ++P+ M++M++ K G +A L + M +G
Sbjct: 170 GLCKMGKTRDAIELLRKM---EKGGVRPNLIMYNMVVDGLCKEGLVTEACGLCSEMVGKG 226
Query: 235 VQQSTVTYNSLM---SFETNYKEVSKIYDQM-QRAGLQPDVVSYALLINAYGKARREEEA 290
+ TYNSL+ ++ ++ ++M + ++PDV ++ +L++A K EA
Sbjct: 227 ICIDVFTYNSLIHGFCGAGQFQGAVRLLNEMVMKEDVRPDVYTFNILVDALCKLGMVAEA 286
Query: 291 LAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSA 350
VF M+ G+ P + N L++ + + G + +A+ VF M P++ SY+T+++
Sbjct: 287 RNVFGLMIKRGLEPDVVSCNALMNGWCLRGCMSEAKEVFDRMVERGKLPNVISYSTLING 346
Query: 351 YVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPN 410
Y ++ A + + Q VP+ +TY L+ G +K + ++ + MR +G P+
Sbjct: 347 YCKVKMVDEALRLLTEMHQRNLVPDTVTYNCLLDGLSKSGRVLYEWDLVEAMRASGQAPD 406
Query: 411 QTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLG 470
+ ++D Y K + D A+ ++ + G P+ + NIL+ A E+
Sbjct: 407 LITYNVLLDDYLKRECLDKALALFQHIVDTGISPNIRTYNILIDGLCKGGRMKAAKEIFQ 466
Query: 471 NFNHPNNEPGINGLSISVD 489
+ P I +I ++
Sbjct: 467 LLSVKGCRPNIRTYNIMIN 485
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 77/288 (26%), Positives = 140/288 (48%), Gaps = 7/288 (2%)
Query: 102 LITAYGKQGDFNKAEKVLSFM-NKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSS 160
LI + G F A ++L+ M K+ P V + L++A + G A +F M
Sbjct: 237 LIHGFCGAGQFQGAVRLLNEMVMKEDVRPDVYTFNILVDALCKLGMVAEARNVFGLMIKR 296
Query: 161 GPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGY 220
G P ++ ++ + EA+EVF +++ K P+ + +I Y K
Sbjct: 297 GLEPDVVSCNALMNGWCLRGCMSEAKEVFDRMVERGK---LPNVISYSTLINGYCKVKMV 353
Query: 221 EKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSKIYD---QMQRAGLQPDVVSYALL 277
++A +L M +R + TVTYN L+ + V +D M+ +G PD+++Y +L
Sbjct: 354 DEALRLLTEMHQRNLVPDTVTYNCLLDGLSKSGRVLYEWDLVEAMRASGQAPDLITYNVL 413
Query: 278 INAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRC 337
++ Y K ++ALA+F+ ++D G+ P + YNIL+D G + A+ +F+ + C
Sbjct: 414 LDDYLKRECLDKALALFQHIVDTGISPNIRTYNILIDGLCKGGRMKAAKEIFQLLSVKGC 473
Query: 338 SPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKG 385
P+I +Y M++ ++ AE + DGF PN +T+ L++
Sbjct: 474 RPNIRTYNIMINGLRREGLLDEAEALLLEMVDDGFPPNAVTFDPLVRA 521
>gi|224058846|ref|XP_002299640.1| predicted protein [Populus trichocarpa]
gi|222846898|gb|EEE84445.1| predicted protein [Populus trichocarpa]
Length = 609
Score = 152 bits (384), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 100/373 (26%), Positives = 187/373 (50%), Gaps = 10/373 (2%)
Query: 99 FLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQ 158
+ L+ Y K GD KA ++ M KG AP+V ++T L++ G+ GR ++A ++F M
Sbjct: 240 YTTLLAIYFKSGD-EKALGLVQEMKDKGCAPTVFTYTELIKGLGKSGRVEDAYSVFLNML 298
Query: 159 SSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKS-PLKPDQKMFHMMI-YMYKK 216
G +P + ++ +F +A + ++A + L D+ +S P+ ++ +I +++
Sbjct: 299 KDGCKPDVVLINNLINIFGKAGRLEDA----LKLFDQMRSLKCAPNVVTYNTVIKALFES 354
Query: 217 AGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSK---IYDQMQRAGLQPDVVS 273
+A F M GV S+ TY+ L+ V K + ++M G P +
Sbjct: 355 KAPASEAASWFEKMKANGVTPSSFTYSILIDGFCKTNRVEKALLLLEEMDEKGFPPCPAA 414
Query: 274 YALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMR 333
Y LINA GKA+R E A +F E+ + R + + Y +++ G +A +F M+
Sbjct: 415 YCSLINALGKAKRYEAANELFLELKENCGRSSARIYAVMIKNLGKCGRPSEAVDLFNEMK 474
Query: 334 RDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLE 393
+ C+PD+ +Y ++S V A +E A R ++++G P++ ++ ++ G A+ E
Sbjct: 475 KIGCNPDVYAYNALMSGLVRAGMIEEAFSALRTMEENGCTPDLNSHNIILNGLARTGRPE 534
Query: 394 KMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILL 453
+ E++ KM+ + IKP+ + TI+ + ++ F+ A +EM S GF D + +L
Sbjct: 535 QATEMFMKMKDSLIKPDAVSYNTILGSLSRSGMFEEAAKLMREMGSRGFEYDHITYSSIL 594
Query: 454 SLAKTADERNEAN 466
DE +E N
Sbjct: 595 EAVGKVDEDDEPN 607
Score = 142 bits (357), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 91/373 (24%), Positives = 189/373 (50%), Gaps = 13/373 (3%)
Query: 77 NVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTA 136
NV + +W + ++ + ++ LI G F + K++ M + +P+ V A
Sbjct: 76 NVKIQFFKWAGKRRNFEHDLTTYMPLIRCLDDCGLFGEMWKMIQEMVR---SPTCVIGPA 132
Query: 137 ----LMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTL 192
+++ G+ A ++F +++S +P+A TY ++ + ++ ++ E++ +
Sbjct: 133 DLSEVVKILGKAKMVNKALSVFYQIKSRKCKPTASTYNSMILMLMQEGHHEKIHELYHEM 192
Query: 193 LDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMS--FET 250
+E PD + +++ + K G + A +LF M G+ + Y +L++ F++
Sbjct: 193 CNE--GDCFPDTMTYSVLVSAFVKLGRDDYAIRLFDEMKANGLHPTAKIYTTLLAIYFKS 250
Query: 251 NYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYN 310
++ + +M+ G P V +Y LI GK+ R E+A +VF ML G +P N
Sbjct: 251 GDEKALGLVQEMKDKGCAPTVFTYTELIKGLGKSGRVEDAYSVFLNMLKDGCKPDVVLIN 310
Query: 311 ILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSA-YVNASDMEGAEKFFRRLKQ 369
L++ F +G ++ A +F MR +C+P++ +Y T++ A + + + A +F ++K
Sbjct: 311 NLINIFGKAGRLEDALKLFDQMRSLKCAPNVVTYNTVIKALFESKAPASEAASWFEKMKA 370
Query: 370 DGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDS 429
+G P+ TY LI G+ K N +EK + + ++M G P + ++++A GK K +++
Sbjct: 371 NGVTPSSFTYSILIDGFCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGKAKRYEA 430
Query: 430 AVVWYKEM-ESCG 441
A + E+ E+CG
Sbjct: 431 ANELFLELKENCG 443
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 82/341 (24%), Positives = 155/341 (45%), Gaps = 41/341 (12%)
Query: 168 TYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLF 227
TY +++ + F E ++ ++ + P ++ + KA KA +F
Sbjct: 97 TYMPLIRCLDDCGLFGEMWKMIQEMVRSPTCVIGPAD--LSEVVKILGKAKMVNKALSVF 154
Query: 228 ALMAERGVQQSTVTYNSLMSF---ETNYKEVSKIYDQMQRAG-LQPDVVSYALLINAYGK 283
+ R + + TYNS++ E +++++ ++Y +M G PD ++Y++L++A+ K
Sbjct: 155 YQIKSRKCKPTASTYNSMILMLMQEGHHEKIHELYHEMCNEGDCFPDTMTYSVLVSAFVK 214
Query: 284 ARREEEALAVFEEMLDAGVRPTHKAYNILLDAF--------------------------- 316
R++ A+ +F+EM G+ PT K Y LL +
Sbjct: 215 LGRDDYAIRLFDEMKANGLHPTAKIYTTLLAIYFKSGDEKALGLVQEMKDKGCAPTVFTY 274
Query: 317 -------AISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQ 369
SG V+ A +VF M +D C PD+ +++ + A +E A K F +++
Sbjct: 275 TELIKGLGKSGRVEDAYSVFLNMLKDGCKPDVVLINNLINIFGKAGRLEDALKLFDQMRS 334
Query: 370 DGFVPNVITYGTLIKG-YAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFD 428
PNV+TY T+IK + + ++KM+ NG+ P+ ++ ++D + K +
Sbjct: 335 LKCAPNVVTYNTVIKALFESKAPASEAASWFEKMKANGVTPSSFTYSILIDGFCKTNRVE 394
Query: 429 SAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELL 469
A++ +EM+ GFPP A L++ A ANEL
Sbjct: 395 KALLLLEEMDEKGFPPCPAAYCSLINALGKAKRYEAANELF 435
>gi|225452992|ref|XP_002263038.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 644
Score = 152 bits (384), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 96/384 (25%), Positives = 174/384 (45%), Gaps = 6/384 (1%)
Query: 101 MLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSS 160
+LI ++ N A VL+ + K G P S T L++ G+ A +F +M
Sbjct: 114 VLINSFCHLNRVNFAFSVLAKILKLGCQPDTASFTTLIKGLCLEGQIGEALHLFDKMIWE 173
Query: 161 GPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGY 220
G +P + Y ++ + A + ++ EK +PD ++ +I+ K
Sbjct: 174 GFQPDVVIYATLINGLCKTGHTSAAIRLLRSM---EKGNCQPDVVVYGTLIHSLCKDRQQ 230
Query: 221 EKARKLFALMAERGVQQSTVTYNSLMSFETN---YKEVSKIYDQMQRAGLQPDVVSYALL 277
+A LF+ M +G+ + VT NSL+ N +K V+ + ++M + + P+ +S +
Sbjct: 231 TQAFNLFSEMITKGISPNIVTCNSLVYALCNLGEWKHVNTLLNEMVDSKIMPNAISLTTV 290
Query: 278 INAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRC 337
++A K +A V + M +GV P Y L+D + +D+A VF M C
Sbjct: 291 VDALCKEGMVAQAHDVVDMMFQSGVEPDVVTYTALIDGHCLRSEMDEAVKVFDMMVHKGC 350
Query: 338 SPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMME 397
+P++ SY T+++ Y M+ A F + + +PN +TY TLI G V L+ +
Sbjct: 351 APNVFSYNTLINGYCKIERMDKAMYLFEEMCRQKLIPNTVTYNTLIHGLCHVGRLQDAIA 410
Query: 398 IYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAK 457
++ +M G P+ + ++D KN D A+ K +E PD + I++
Sbjct: 411 LFREMVACGQIPDLVTYRILLDYLCKNCHLDKAMALLKAIEGSNLDPDIQIYTIVIDGMC 470
Query: 458 TADERNEANELLGNFNHPNNEPGI 481
A E +A +L N + +P +
Sbjct: 471 RAGELEDARDLFSNLSSKGLKPNV 494
Score = 152 bits (383), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 108/419 (25%), Positives = 177/419 (42%), Gaps = 44/419 (10%)
Query: 112 FNKAEKVLSFMNKKGY---APSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALT 168
FN + LS N+ + PS+V ++ + + RY ++ R+M S G + T
Sbjct: 52 FNTLDDALSSFNRMLHMHPPPSIVDFAKILTSITKVKRYSTVLSLSRKMDSFGIPHNVYT 111
Query: 169 YQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFA 228
+++ F N+ A V +L K +PD F +I G +A LF
Sbjct: 112 LNVLINSFCHLNRVNFAFSVLAKIL---KLGCQPDTASFTTLIKGLCLEGQIGEALHLFD 168
Query: 229 LMAERGVQQSTVTYNSLMS--FETNYKEVS-KIYDQMQRAGLQPDVVSYALLINAYGKAR 285
M G Q V Y +L++ +T + + ++ M++ QPDVV Y LI++ K R
Sbjct: 169 KMIWEGFQPDVVIYATLINGLCKTGHTSAAIRLLRSMEKGNCQPDVVVYGTLIHSLCKDR 228
Query: 286 REEEALAVFEEMLDAGVRPTHKAYNILL-------------------------------- 313
++ +A +F EM+ G+ P N L+
Sbjct: 229 QQTQAFNLFSEMITKGISPNIVTCNSLVYALCNLGEWKHVNTLLNEMVDSKIMPNAISLT 288
Query: 314 ---DAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQD 370
DA GMV QA V M + PD+ +YT ++ + S+M+ A K F +
Sbjct: 289 TVVDALCKEGMVAQAHDVVDMMFQSGVEPDVVTYTALIDGHCLRSEMDEAVKVFDMMVHK 348
Query: 371 GFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSA 430
G PNV +Y TLI GY K+ ++K M ++++M + PN + T++ A
Sbjct: 349 GCAPNVFSYNTLINGYCKIERMDKAMYLFEEMCRQKLIPNTVTYNTLIHGLCHVGRLQDA 408
Query: 431 VVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGINGLSISVD 489
+ ++EM +CG PD ILL ++A LL N +P I +I +D
Sbjct: 409 IALFREMVACGQIPDLVTYRILLDYLCKNCHLDKAMALLKAIEGSNLDPDIQIYTIVID 467
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 94/377 (24%), Positives = 177/377 (46%), Gaps = 7/377 (1%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
LI + K +A + S M KG +P++V+ +L+ A G +K+ + M S
Sbjct: 220 LIHSLCKDRQQTQAFNLFSEMITKGISPNIVTCNSLVYALCNLGEWKHVNTLLNEMVDSK 279
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
P+A++ ++ + +A +V + +S ++PD + +I + +
Sbjct: 280 IMPNAISLTTVVDALCKEGMVAQAHDVVDMMF---QSGVEPDVVTYTALIDGHCLRSEMD 336
Query: 222 KARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSK---IYDQMQRAGLQPDVVSYALLI 278
+A K+F +M +G + +YN+L++ + + K ++++M R L P+ V+Y LI
Sbjct: 337 EAVKVFDMMVHKGCAPNVFSYNTLINGYCKIERMDKAMYLFEEMCRQKLIPNTVTYNTLI 396
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCS 338
+ R ++A+A+F EM+ G P Y ILLD + +D+A + K +
Sbjct: 397 HGLCHVGRLQDAIALFREMVACGQIPDLVTYRILLDYLCKNCHLDKAMALLKAIEGSNLD 456
Query: 339 PDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEI 398
PDI YT ++ A ++E A F L G PNV TY + G K L++ ++
Sbjct: 457 PDIQIYTIVIDGMCRAGELEDARDLFSNLSSKGLKPNVWTYNIMTHGLCKRGLLDEATKL 516
Query: 399 YDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLS-LAK 457
+ +M N + + TI + +N + A+ +EM + GF D +L+ L+
Sbjct: 517 FMEMDENACSADGCTYNTITQGFLRNNETSRAIQLLEEMLARGFSCDVSTTTLLVGMLSD 576
Query: 458 TADERNEANELLGNFNH 474
+++EA++L F H
Sbjct: 577 DGLDQSEAHKLEDMFPH 593
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 98/453 (21%), Positives = 191/453 (42%), Gaps = 52/453 (11%)
Query: 31 WRRLMNQIEEVGSAVAVLRSERT--RGQPLPKDLVLGTLVRL-----KQLKKWNVVSEVL 83
+ L+N + + G A +R R+ +G P +V GTL+ +Q + +N+ SE++
Sbjct: 182 YATLINGLCKTGHTSAAIRLLRSMEKGNCQPDVVVYGTLIHSLCKDRQQTQAFNLFSEMI 241
Query: 84 ----------------------EWLRIQSWWD--------FNEMDFLMLITAYGKQGDFN 113
EW + + + N + ++ A K+G
Sbjct: 242 TKGISPNIVTCNSLVYALCNLGEWKHVNTLLNEMVDSKIMPNAISLTTVVDALCKEGMVA 301
Query: 114 KAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIIL 173
+A V+ M + G P VV++TAL++ + A +F M G P+ +Y ++
Sbjct: 302 QAHDVVDMMFQSGVEPDVVTYTALIDGHCLRSEMDEAVKVFDMMVHKGCAPNVFSYNTLI 361
Query: 174 KLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAER 233
+ + + +A +F + ++ L P+ ++ +I+ G + A LF M
Sbjct: 362 NGYCKIERMDKAMYLFEEMCRQK---LIPNTVTYNTLIHGLCHVGRLQDAIALFREMVAC 418
Query: 234 GVQQSTVTYNSLMSFETNYKEVSK---IYDQMQRAGLQPDVVSYALLINAYGKARREEEA 290
G VTY L+ + + K + ++ + L PD+ Y ++I+ +A E+A
Sbjct: 419 GQIPDLVTYRILLDYLCKNCHLDKAMALLKAIEGSNLDPDIQIYTIVIDGMCRAGELEDA 478
Query: 291 LAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSA 350
+F + G++P YNI+ G++D+A +F M + CS D C+Y T+
Sbjct: 479 RDLFSNLSSKGLKPNVWTYNIMTHGLCKRGLLDEATKLFMEMDENACSADGCTYNTITQG 538
Query: 351 YVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLE-----KMMEIYDKMRVN 405
++ ++ A + + GF +V T TL+ G + L+ K+ +++ +R
Sbjct: 539 FLRNNETSRAIQLLEEMLARGFSCDVST-TTLLVGMLSDDGLDQSEAHKLEDMFPHLR-- 595
Query: 406 GIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEME 438
I+ T+F D K W +E+E
Sbjct: 596 -IQVKDTVFCKEDDINALGKVISDLNDWLEELE 627
>gi|449481246|ref|XP_004156125.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At2g02150-like [Cucumis
sativus]
Length = 822
Score = 152 bits (383), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 99/377 (26%), Positives = 187/377 (49%), Gaps = 6/377 (1%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + + LI A+ K+G A K+L M + G P+ ++T+L++A + G A +
Sbjct: 334 NVVTYSTLIDAFCKEGMMQGAIKLLXDMRRTGLLPNEFTYTSLIDANCKAGNLTEAWKLL 393
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
M +G + + +TY +L +A + EAEEVF ++L K + P+Q+++ +++ Y
Sbjct: 394 NDMLQAGVKLNIVTYTALLDGLCKAGRMIEAEEVFRSML---KDGISPNQQVYTALVHGY 450
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSLM---SFETNYKEVSKIYDQMQRAGLQPDV 271
KA E A K+ M E ++ + Y S++ + +E I ++M+ G+ +
Sbjct: 451 IKAERMEDAMKILKQMTECNIKPDLILYGSIIWGHCSQRKLEETKLILEEMKSRGISANP 510
Query: 272 VSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKC 331
V +I+AY KA + +AL F+EM D GV T Y +L+D +G+V+ A F
Sbjct: 511 VISTTIIDAYFKAGKSSDALNFFQEMQDVGVEATIVTYCVLIDGLCEAGIVELAVDYFCR 570
Query: 332 MRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNN 391
M P++ YT+++ + +E A+K F ++ G P++ + LI G K N
Sbjct: 571 MLSLGLQPNVAVYTSLIDGLCXNNCIESAKKLFDEMQCRGMTPDITAFTALIDGNLKHGN 630
Query: 392 LEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNI 451
L++ + + +M I+ + ++T+++ + + + A ++ EM G P++
Sbjct: 631 LQEALVLISRMTELAIEFDLHVYTSLVSGFSQCGELHQARKFFNEMIEKGILPEEVLCIC 690
Query: 452 LLSLAKTADERNEANEL 468
LL + +EA EL
Sbjct: 691 LLREYYKRGQLDEAIEL 707
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 100/343 (29%), Positives = 172/343 (50%), Gaps = 6/343 (1%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
L+ K G+ K + M G APSV ++ +++ + G +N+ +F +M+ G
Sbjct: 201 LLHRLSKSGNGQLVRKFFNDMIGAGIAPSVFTYNVMIDYLCKEGDLENSRRLFVQMREMG 260
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
P +TY ++ + + +E +F + D PD ++ +I Y K
Sbjct: 261 LSPDVVTYNSLIDGYGKVGSLEEVASLFNEMKD---VGCVPDIITYNGLINCYCKFEKMP 317
Query: 222 KARKLFALMAERGVQQSTVTYNSLM-SF--ETNYKEVSKIYDQMQRAGLQPDVVSYALLI 278
+A + F+ M G++ + VTY++L+ +F E + K+ M+R GL P+ +Y LI
Sbjct: 318 RAFEYFSEMKNNGLKPNVVTYSTLIDAFCKEGMMQGAIKLLXDMRRTGLLPNEFTYTSLI 377
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCS 338
+A KA EA + +ML AGV+ Y LLD +G + +A VF+ M +D S
Sbjct: 378 DANCKAGNLTEAWKLLNDMLQAGVKLNIVTYTALLDGLCKAGRMIEAEEVFRSMLKDGIS 437
Query: 339 PDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEI 398
P+ YT ++ Y+ A ME A K +++ + P++I YG++I G+ LE+ I
Sbjct: 438 PNQQVYTALVHGYIKAERMEDAMKILKQMTECNIKPDLILYGSIIWGHCSQRKLEETKLI 497
Query: 399 YDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCG 441
++M+ GI N I TTI+DAY K A+ +++EM+ G
Sbjct: 498 LEEMKSRGISANPVISTTIIDAYFKAGKSSDALNFFQEMQDVG 540
Score = 144 bits (364), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 88/313 (28%), Positives = 152/313 (48%), Gaps = 6/313 (1%)
Query: 136 ALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDE 195
L + G + A F RM++ P A + +L ++ + + F ++
Sbjct: 165 VLFSVFVELGLLEEANECFSRMRNFRTLPKARSCNFLLHRLSKSGNGQLVRKFFNDMIG- 223
Query: 196 EKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLM---SFETNY 252
+ + P +++MI K G E +R+LF M E G+ VTYNSL+ +
Sbjct: 224 --AGIAPSVFTYNVMIDYLCKEGDLENSRRLFVQMREMGLSPDVVTYNSLIDGYGKVGSL 281
Query: 253 KEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNIL 312
+EV+ ++++M+ G PD+++Y LIN Y K + A F EM + G++P Y+ L
Sbjct: 282 EEVASLFNEMKDVGCVPDIITYNGLINCYCKFEKMPRAFEYFSEMKNNGLKPNVVTYSTL 341
Query: 313 LDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGF 372
+DAF GM+ A + MRR P+ +YT+++ A A ++ A K + Q G
Sbjct: 342 IDAFCKEGMMQGAIKLLXDMRRTGLLPNEFTYTSLIDANCKAGNLTEAWKLLNDMLQAGV 401
Query: 373 VPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVV 432
N++TY L+ G K + + E++ M +GI PNQ ++T ++ Y K + + A+
Sbjct: 402 KLNIVTYTALLDGLCKAGRMIEAEEVFRSMLKDGISPNQQVYTALVHGYIKAERMEDAMK 461
Query: 433 WYKEMESCGFPPD 445
K+M C PD
Sbjct: 462 ILKQMTECNIKPD 474
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 97/391 (24%), Positives = 174/391 (44%), Gaps = 41/391 (10%)
Query: 101 MLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSS 160
++I K+GD + ++ M + G +P VV++ +L++ YG+ G + ++F M+
Sbjct: 235 VMIDYLCKEGDLENSRRLFVQMREMGLSPDVVTYNSLIDGYGKVGSLEEVASLFNEMKDV 294
Query: 161 GPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGY 220
G P +TY ++ + + K A E F + + + LKP+ + +I + K G
Sbjct: 295 GCVPDIITYNGLINCYCKFEKMPRAFEYFSEM---KNNGLKPNVVTYSTLIDAFCKEGMM 351
Query: 221 EKARKLFALMAERGVQQSTVTYNSLMSFET---NYKEVSKIYDQMQRAGLQPDVVSYALL 277
+ A KL M G+ + TY SL+ N E K+ + M +AG++ ++V+Y L
Sbjct: 352 QGAIKLLXDMRRTGLLPNEFTYTSLIDANCKAGNLTEAWKLLNDMLQAGVKLNIVTYTAL 411
Query: 278 INAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRC 337
++ KA R EA VF ML G+ P + Y L+ + + ++ A + K M
Sbjct: 412 LDGLCKAGRMIEAEEVFRSMLKDGISPNQQVYTALVHGYIKAERMEDAMKILKQMTECNI 471
Query: 338 SPDICSY-----------------------------------TTMLSAYVNASDMEGAEK 362
PD+ Y TT++ AY A A
Sbjct: 472 KPDLILYGSIIWGHCSQRKLEETKLILEEMKSRGISANPVISTTIIDAYFKAGKSSDALN 531
Query: 363 FFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYG 422
FF+ ++ G ++TY LI G + +E ++ + +M G++PN ++T+++D
Sbjct: 532 FFQEMQDVGVEATIVTYCVLIDGLCEAGIVELAVDYFCRMLSLGLQPNVAVYTSLIDGLC 591
Query: 423 KNKDFDSAVVWYKEMESCGFPPDQKAKNILL 453
N +SA + EM+ G PD A L+
Sbjct: 592 XNNCIESAKKLFDEMQCRGMTPDITAFTALI 622
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 84/315 (26%), Positives = 150/315 (47%), Gaps = 6/315 (1%)
Query: 168 TYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLF 227
+ ++ +FVE +EA E F + + P + + +++ K+G + RK F
Sbjct: 162 VFDVLFSVFVELGLLEEANECFSRMRNFRT---LPKARSCNFLLHRLSKSGNGQLVRKFF 218
Query: 228 ALMAERGVQQSTVTYNSLMSF---ETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKA 284
M G+ S TYN ++ + E + + +++ QM+ GL PDVV+Y LI+ YGK
Sbjct: 219 NDMIGAGIAPSVFTYNVMIDYLCKEGDLENSRRLFVQMREMGLSPDVVTYNSLIDGYGKV 278
Query: 285 RREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSY 344
EE ++F EM D G P YN L++ + + +A F M+ + P++ +Y
Sbjct: 279 GSLEEVASLFNEMKDVGCVPDIITYNGLINCYCKFEKMPRAFEYFSEMKNNGLKPNVVTY 338
Query: 345 TTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRV 404
+T++ A+ M+GA K +++ G +PN TY +LI K NL + ++ + M
Sbjct: 339 STLIDAFCKEGMMQGAIKLLXDMRRTGLLPNEFTYTSLIDANCKAGNLTEAWKLLNDMLQ 398
Query: 405 NGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNE 464
G+K N +T ++D K A ++ M G P+Q+ L+ A+ +
Sbjct: 399 AGVKLNIVTYTALLDGLCKAGRMIEAEEVFRSMLKDGISPNQQVYTALVHGYIKAERMED 458
Query: 465 ANELLGNFNHPNNEP 479
A ++L N +P
Sbjct: 459 AMKILKQMTECNIKP 473
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 43/182 (23%), Positives = 78/182 (42%)
Query: 308 AYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRL 367
+++L F G++++A F MR R P S +L + + + KFF +
Sbjct: 162 VFDVLFSVFVELGLLEEANECFSRMRNFRTLPKARSCNFLLHRLSKSGNGQLVRKFFNDM 221
Query: 368 KQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDF 427
G P+V TY +I K +LE ++ +MR G+ P+ + +++D YGK
Sbjct: 222 IGAGIAPSVFTYNVMIDYLCKEGDLENSRRLFVQMREMGLSPDVVTYNSLIDGYGKVGSL 281
Query: 428 DSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGINGLSIS 487
+ + EM+ G PD N L++ ++ A E + +P + S
Sbjct: 282 EEVASLFNEMKDVGCVPDIITYNGLINCYCKFEKMPRAFEYFSEMKNNGLKPNVVTYSTL 341
Query: 488 VD 489
+D
Sbjct: 342 ID 343
>gi|359476104|ref|XP_003631789.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
mitochondrial-like [Vitis vinifera]
Length = 877
Score = 152 bits (383), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 87/356 (24%), Positives = 184/356 (51%), Gaps = 7/356 (1%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
L+ Y QG+ + A + + + + G P+ V+++ L+E G + A ++ +M+ +G
Sbjct: 371 LMKGYCAQGNLDSALNLFNKITEDGLFPNKVTYSVLIEGCCNSGNIEKASELYTQMKLNG 430
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
PS +L+ +++A ++EA ++F DE + +++M+ K G +
Sbjct: 431 IPPSVFNVNSLLRGYLKAPLWEEASKLF----DEAVDCGVANIFTYNIMMSWLCKGGKMD 486
Query: 222 KARKLFALMAERGVQQSTVTYNSLM---SFETNYKEVSKIYDQMQRAGLQPDVVSYALLI 278
+A L M +G+ + V+YN ++ + N S ++ M L+P+VV+Y++LI
Sbjct: 487 EACSLLDNMVNQGMVPNVVSYNDMILGHCRKGNMDMASSVFSDMLARDLKPNVVTYSILI 546
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCS 338
+ K E+AL +F++ML + PT +N +++ G + +AR K +
Sbjct: 547 DGNFKKGDSEKALDLFDQMLSLNIAPTDFTFNTIINGLCKVGQMSEARDKLKNFLEEGFI 606
Query: 339 PDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEI 398
P +Y +++ ++ +++ A +R + + G PNV+TY +LI G+ K N ++ ++
Sbjct: 607 PSCMTYNSIVDGFIKEGNIDSALAVYREMCEFGVSPNVVTYTSLINGFCKSNRIDLALKT 666
Query: 399 YDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLS 454
D+MR G++ + T ++ ++D + K +D +SA + E+ G P++ N ++S
Sbjct: 667 RDEMREKGLELDVTAYSALIDGFCKRRDMESAQDLFFELLEVGLSPNRIVYNSMIS 722
Score = 141 bits (356), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 91/356 (25%), Positives = 173/356 (48%), Gaps = 6/356 (1%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
+I + ++G+ + A V S M + P+VV+++ L++ + G + A +F +M S
Sbjct: 510 MILGHCRKGNMDMASSVFSDMLARDLKPNVVTYSILIDGNFKKGDSEKALDLFDQMLSLN 569
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
P+ T+ I+ + + EA + L+E P ++ ++ + K G +
Sbjct: 570 IAPTDFTFNTIINGLCKVGQMSEARDKLKNFLEEG---FIPSCMTYNSIVDGFIKEGNID 626
Query: 222 KARKLFALMAERGVQQSTVTYNSLMS--FETNYKEVS-KIYDQMQRAGLQPDVVSYALLI 278
A ++ M E GV + VTY SL++ ++N +++ K D+M+ GL+ DV +Y+ LI
Sbjct: 627 SALAVYREMCEFGVSPNVVTYTSLINGFCKSNRIDLALKTRDEMREKGLELDVTAYSALI 686
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCS 338
+ + K R E A +F E+L+ G+ P YN ++ F ++ A +K M DR
Sbjct: 687 DGFCKRRDMESAQDLFFELLEVGLSPNRIVYNSMISGFRDLNNMEAALVWYKKMINDRIP 746
Query: 339 PDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEI 398
D+ +YTT++ + + A + + G VP++IT+ L+ G LE +I
Sbjct: 747 CDLGTYTTLIDGLLKEGRLVFASDLYMEMLSKGIVPDIITFHVLVNGLCNKGQLENARKI 806
Query: 399 YDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLS 454
++M + P+ I+ T++ Y + + A + EM G PD +IL++
Sbjct: 807 LEEMDRKNMTPSVLIYNTLIAGYFREGNLKEAFTLHDEMLDRGLVPDDVTYDILIN 862
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 107/459 (23%), Positives = 196/459 (42%), Gaps = 37/459 (8%)
Query: 59 PKDLVLGTLVRLKQLKKWNVVSEVLEWLRIQSWWDF-NEMDFLMLITAYGKQGDFNKAEK 117
P +LV+ T + + N+ S + + +I F N++ + +LI G+ KA +
Sbjct: 362 PMNLVVATSLMKGYCAQGNLDSALNLFNKITEDGLFPNKVTYSVLIEGCCNSGNIEKASE 421
Query: 118 VLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFV 177
+ + M G PSV + +L+ Y + ++ A +F G + TY I++
Sbjct: 422 LYTQMKLNGIPPSVFNVNSLLRGYLKAPLWEEASKLFDEAVDCG-VANIFTYNIMMSWLC 480
Query: 178 EANKFKEAEEVFMTLLDEEKSP--------------------------------LKPDQK 205
+ K EA + ++++ P LKP+
Sbjct: 481 KGGKMDEACSLLDNMVNQGMVPNVVSYNDMILGHCRKGNMDMASSVFSDMLARDLKPNVV 540
Query: 206 MFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSKIYDQMQR- 264
+ ++I K G EKA LF M + + T+N++++ ++S+ D+++
Sbjct: 541 TYSILIDGNFKKGDSEKALDLFDQMLSLNIAPTDFTFNTIINGLCKVGQMSEARDKLKNF 600
Query: 265 --AGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMV 322
G P ++Y +++ + K + ALAV+ EM + GV P Y L++ F S +
Sbjct: 601 LEEGFIPSCMTYNSIVDGFIKEGNIDSALAVYREMCEFGVSPNVVTYTSLINGFCKSNRI 660
Query: 323 DQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTL 382
D A MR D+ +Y+ ++ + DME A+ F L + G PN I Y ++
Sbjct: 661 DLALKTRDEMREKGLELDVTAYSALIDGFCKRRDMESAQDLFFELLEVGLSPNRIVYNSM 720
Query: 383 IKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGF 442
I G+ +NN+E + Y KM + I + +TT++D K A Y EM S G
Sbjct: 721 ISGFRDLNNMEAALVWYKKMINDRIPCDLGTYTTLIDGLLKEGRLVFASDLYMEMLSKGI 780
Query: 443 PPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGI 481
PD ++L++ + A ++L + N P +
Sbjct: 781 VPDIITFHVLVNGLCNKGQLENARKILEEMDRKNMTPSV 819
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 72/293 (24%), Positives = 141/293 (48%), Gaps = 6/293 (2%)
Query: 99 FLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQ 158
F +I K G ++A L ++G+ PS +++ ++++ + + G +A A++R M
Sbjct: 577 FNTIINGLCKVGQMSEARDKLKNFLEEGFIPSCMTYNSIVDGFIKEGNIDSALAVYREMC 636
Query: 159 SSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAG 218
G P+ +TY ++ F ++N+ A T + + L+ D + +I + K
Sbjct: 637 EFGVSPNVVTYTSLINGFCKSNRIDLA---LKTRDEMREKGLELDVTAYSALIDGFCKRR 693
Query: 219 GYEKARKLFALMAERGVQQSTVTYNSLMS--FETNYKEVSKI-YDQMQRAGLQPDVVSYA 275
E A+ LF + E G+ + + YNS++S + N E + + Y +M + D+ +Y
Sbjct: 694 DMESAQDLFFELLEVGLSPNRIVYNSMISGFRDLNNMEAALVWYKKMINDRIPCDLGTYT 753
Query: 276 LLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRD 335
LI+ K R A ++ EML G+ P +++L++ G ++ AR + + M R
Sbjct: 754 TLIDGLLKEGRLVFASDLYMEMLSKGIVPDIITFHVLVNGLCNKGQLENARKILEEMDRK 813
Query: 336 RCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAK 388
+P + Y T+++ Y +++ A + G VP+ +TY LI G K
Sbjct: 814 NMTPSVLIYNTLIAGYFREGNLKEAFTLHDEMLDRGLVPDDVTYDILINGKFK 866
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 95/392 (24%), Positives = 159/392 (40%), Gaps = 44/392 (11%)
Query: 101 MLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSS 160
+L+TA ++ + + + M +G + ++ A + GR + AE FR +
Sbjct: 230 ILLTALVRRNMIGELRDLYNKMVLRGIYGDHFTVHVMVRACLKEGRVEEAEEYFRETKER 289
Query: 161 GPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKS-PLKPDQKMFHMMIYM------ 213
G + A Y II++ + K + + LL+E K P + F +I
Sbjct: 290 GVKLDAGAYSIIIQAVCK----KPNSNLGLELLEEMKERGWVPSEATFTSVIVACVAQGN 345
Query: 214 -----------------------------YKKAGGYEKARKLFALMAERGVQQSTVTYNS 244
Y G + A LF + E G+ + VTY+
Sbjct: 346 MVEALRLKEEMINCGKPMNLVVATSLMKGYCAQGNLDSALNLFNKITEDGLFPNKVTYSV 405
Query: 245 LM---SFETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAG 301
L+ N ++ S++Y QM+ G+ P V + L+ Y KA EEA +F+E +D G
Sbjct: 406 LIEGCCNSGNIEKASELYTQMKLNGIPPSVFNVNSLLRGYLKAPLWEEASKLFDEAVDCG 465
Query: 302 VRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAE 361
V YNI++ G +D+A ++ M P++ SY M+ + +M+ A
Sbjct: 466 VANIF-TYNIMMSWLCKGGKMDEACSLLDNMVNQGMVPNVVSYNDMILGHCRKGNMDMAS 524
Query: 362 KFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAY 421
F + PNV+TY LI G K + EK ++++D+M I P F TI++
Sbjct: 525 SVFSDMLARDLKPNVVTYSILIDGNFKKGDSEKALDLFDQMLSLNIAPTDFTFNTIINGL 584
Query: 422 GKNKDFDSAVVWYKEMESCGFPPDQKAKNILL 453
K A K GF P N ++
Sbjct: 585 CKVGQMSEARDKLKNFLEEGFIPSCMTYNSIV 616
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 70/317 (22%), Positives = 142/317 (44%), Gaps = 7/317 (2%)
Query: 168 TYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLF 227
+ +L ++ AN+ + A + F ++ ++ P P + + G + R L+
Sbjct: 192 VFNYLLNAYIRANRIENAIDCFNAMICQDVIPWVPYMNILLTALVRRNMIG---ELRDLY 248
Query: 228 ALMAERGVQQSTVTYNSLMSF---ETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKA 284
M RG+ T + ++ E +E + + + + G++ D +Y+++I A K
Sbjct: 249 NKMVLRGIYGDHFTVHVMVRACLKEGRVEEAEEYFRETKERGVKLDAGAYSIIIQAVCKK 308
Query: 285 RREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSY 344
L + EEM + G P+ + ++ A G + +A + + M ++
Sbjct: 309 PNSNLGLELLEEMKERGWVPSEATFTSVIVACVAQGNMVEALRLKEEMINCGKPMNLVVA 368
Query: 345 TTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRV 404
T+++ Y +++ A F ++ +DG PN +TY LI+G N+EK E+Y +M++
Sbjct: 369 TSLMKGYCAQGNLDSALNLFNKITEDGLFPNKVTYSVLIEGCCNSGNIEKASELYTQMKL 428
Query: 405 NGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNE 464
NGI P+ +++ Y K ++ A + E CG + NI++S + +E
Sbjct: 429 NGIPPSVFNVNSLLRGYLKAPLWEEASKLFDEAVDCGV-ANIFTYNIMMSWLCKGGKMDE 487
Query: 465 ANELLGNFNHPNNEPGI 481
A LL N + P +
Sbjct: 488 ACSLLDNMVNQGMVPNV 504
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 87/189 (46%)
Query: 255 VSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLD 314
V + + +R + D + L+NAY +A R E A+ F M+ V P NILL
Sbjct: 174 VDHLINCAKRFDFELDHRVFNYLLNAYIRANRIENAIDCFNAMICQDVIPWVPYMNILLT 233
Query: 315 AFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVP 374
A M+ + R ++ M D + M+ A + +E AE++FR K+ G
Sbjct: 234 ALVRRNMIGELRDLYNKMVLRGIYGDHFTVHVMVRACLKEGRVEEAEEYFRETKERGVKL 293
Query: 375 NVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWY 434
+ Y +I+ K N +E+ ++M+ G P++ FT+++ A + A+
Sbjct: 294 DAGAYSIIIQAVCKKPNSNLGLELLEEMKERGWVPSEATFTSVIVACVAQGNMVEALRLK 353
Query: 435 KEMESCGFP 443
+EM +CG P
Sbjct: 354 EEMINCGKP 362
Score = 65.1 bits (157), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 56/227 (24%), Positives = 95/227 (41%), Gaps = 35/227 (15%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + + LI + K + A K M +KG V +++AL++ + + ++A+ +F
Sbjct: 643 NVVTYTSLINGFCKSNRIDLALKTRDEMREKGLELDVTAYSALIDGFCKRRDMESAQDLF 702
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANK------------------------------FKE 184
+ G P+ + Y ++ F + N KE
Sbjct: 703 FELLEVGLSPNRIVYNSMISGFRDLNNMEAALVWYKKMINDRIPCDLGTYTTLIDGLLKE 762
Query: 185 AEEVFMTLLDEE--KSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTY 242
VF + L E + PD FH+++ G E ARK+ M + + S + Y
Sbjct: 763 GRLVFASDLYMEMLSKGIVPDIITFHVLVNGLCNKGQLENARKILEEMDRKNMTPSVLIY 822
Query: 243 NSLMS---FETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARR 286
N+L++ E N KE ++D+M GL PD V+Y +LIN K R
Sbjct: 823 NTLIAGYFREGNLKEAFTLHDEMLDRGLVPDDVTYDILINGKFKGDR 869
Score = 42.4 bits (98), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 40/170 (23%), Positives = 73/170 (42%), Gaps = 6/170 (3%)
Query: 305 THKAYNILLDAFAISGMVDQARTVF-----KCMRRDRCSPDICSYTTMLSAYVNASDMEG 359
TH LL+ + +SG D + VF C +R D + +L+AY+ A+ +E
Sbjct: 150 THGHARKLLNRY-VSGDSDPSPVVFVDHLINCAKRFDFELDHRVFNYLLNAYIRANRIEN 208
Query: 360 AEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMD 419
A F + +P V L+ + N + ++ ++Y+KM + GI + ++
Sbjct: 209 AIDCFNAMICQDVIPWVPYMNILLTALVRRNMIGELRDLYNKMVLRGIYGDHFTVHVMVR 268
Query: 420 AYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELL 469
A K + A +++E + G D A +I++ N ELL
Sbjct: 269 ACLKEGRVEEAEEYFRETKERGVKLDAGAYSIIIQAVCKKPNSNLGLELL 318
>gi|255661132|gb|ACU25735.1| pentatricopeptide repeat-containing protein [Verbena perennis]
Length = 426
Score = 152 bits (383), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 98/374 (26%), Positives = 183/374 (48%), Gaps = 37/374 (9%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
LI K D++KA + S + + G+ P +V++ A++ +G+ ++ A ++ M+++G
Sbjct: 50 LIELSRKLCDYSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMRTAG 109
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
P+ +Y +L ++VE KF EA VF + E K L D ++MI +Y + G +
Sbjct: 110 VTPNTASYSTLLTMYVENRKFLEALSVFAEM-REIKCLL--DLTTCNIMIDVYGQLGMAK 166
Query: 222 KARKLFALMAERGVQQSTVTYNSLMSFETN---YKEVSKIYDQMQRAGLQPDVVSYALLI 278
+A KLF M + G++ + V+YN+L+ + + E ++ MQR ++ +VV+Y ++
Sbjct: 167 EADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMM 226
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCS 338
YGK E+A + +EM + G+ P Y+ ++ + G +D+A +F+ +R
Sbjct: 227 MIYGKTLEHEKANNLIQEMQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVD 286
Query: 339 PDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVP------------------------ 374
D Y TM+ AY A + A++ LK+ +P
Sbjct: 287 IDQVLYQTMIVAYERAGLVAHAKRLLHELKRPDNIPRDIAIHILAGAGRIEEATWVFRQA 346
Query: 375 -------NVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDF 427
++ + +I ++K ++E++DKMR G P+ + I++AYGK +F
Sbjct: 347 IDAGEVKDIXVFERMIHLFSKYKKYGNVVEVFDKMRGLGYFPDSNVIALILNAYGKLHEF 406
Query: 428 DSAVVWYKEMESCG 441
D A Y EM+ G
Sbjct: 407 DKANDVYMEMQEVG 420
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 85/318 (26%), Positives = 145/318 (45%), Gaps = 38/318 (11%)
Query: 200 LKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFE---TNYKEVS 256
L PD+ + +I + K G ++ A M + V V Y++L+ +Y +
Sbjct: 5 LSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDYSKAI 64
Query: 257 KIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAF 316
I+ +++R+G PD+V+Y +IN +GKA+ EA ++ EM AGV P +Y+ LL +
Sbjct: 65 SIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVTPNTASYSTLLTMY 124
Query: 317 AISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNV 376
+ +A +VF MR +C D+ + M+ Y + A+K F +++ G PNV
Sbjct: 125 VENRKFLEALSVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNV 184
Query: 377 ITYGTLIKGYAKV---------------NNLEK-------MMEIYDK------------- 401
++Y TL++ Y N+E+ MM IY K
Sbjct: 185 VSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLIQE 244
Query: 402 MRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADE 461
M+ GI+PN ++TI+ +GK D A + ++++ S G DQ ++ + A
Sbjct: 245 MQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVDIDQVLYQTMIVAYERAGL 304
Query: 462 RNEANELLGNFNHPNNEP 479
A LL P+N P
Sbjct: 305 VAHAKRLLHELKRPDNIP 322
Score = 82.0 bits (201), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 79/181 (43%)
Query: 301 GVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGA 360
+ P Y+ L+ F G+ D A + + M +DR D+ Y+ ++ D A
Sbjct: 4 ALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDYSKA 63
Query: 361 EKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDA 420
F RLK+ GF P+++ Y +I + K + + +MR G+ PN ++T++
Sbjct: 64 ISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVTPNTASYSTLLTM 123
Query: 421 YGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPG 480
Y +N+ F A+ + EM D NI++ + EA++L EP
Sbjct: 124 YVENRKFLEALSVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPN 183
Query: 481 I 481
+
Sbjct: 184 V 184
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/244 (22%), Positives = 114/244 (46%), Gaps = 6/244 (2%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + + L+ YG F +A + M +K +VV++ ++M YG+ ++ A +
Sbjct: 183 NVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLI 242
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
+ MQ+ G P+++TY I+ ++ + K A +F L S + DQ ++ MI Y
Sbjct: 243 QEMQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKL---RSSGVDIDQVLYQTMIVAY 299
Query: 215 KKAGGYEKARKLFA-LMAERGVQQSTVTYNSLMSFETNYKEVSKIYDQMQRAGLQPDVVS 273
++AG A++L L + + + +++ +E + ++ Q AG D+
Sbjct: 300 ERAGLVAHAKRLLHELKRPDNIPRDIAIH--ILAGAGRIEEATWVFRQAIDAGEVKDIXV 357
Query: 274 YALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMR 333
+ +I+ + K ++ + VF++M G P ++L+A+ D+A V+ M+
Sbjct: 358 FERMIHLFSKYKKYGNVVEVFDKMRGLGYFPDSNVIALILNAYGKLHEFDKANDVYMEMQ 417
Query: 334 RDRC 337
C
Sbjct: 418 EVGC 421
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 28/123 (22%), Positives = 64/123 (52%)
Query: 333 RRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNL 392
R SPD +Y+T+++ + + A + ++++QD +++ Y LI+ K+ +
Sbjct: 1 RERALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDY 60
Query: 393 EKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNIL 452
K + I+ +++ +G P+ + +++ +GK K F A EM + G P+ + + L
Sbjct: 61 SKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVTPNTASYSTL 120
Query: 453 LSL 455
L++
Sbjct: 121 LTM 123
>gi|224143015|ref|XP_002324819.1| predicted protein [Populus trichocarpa]
gi|222866253|gb|EEF03384.1| predicted protein [Populus trichocarpa]
Length = 552
Score = 152 bits (383), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 98/365 (26%), Positives = 180/365 (49%), Gaps = 7/365 (1%)
Query: 121 FMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEAN 180
F K +V S T LM G+ + AE+IF + G +PS ++Y +L
Sbjct: 3 FCTTKDSCRTVRSRTKLMNFLVEKGKPQEAESIFYSLIEGGHKPSLISYTTLLAALTMQK 62
Query: 181 KFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTV 240
+F + ++ + E++ + PD F+ +I + ++G E A + F M E G++ +T
Sbjct: 63 RF---DSIYSIISQVEENGMNPDSIFFNAVINAFSESGNMESAMETFWKMQENGMKPTTS 119
Query: 241 TYNSLM---SFETNYKEVSKIYDQMQRAG-LQPDVVSYALLINAYGKARREEEALAVFEE 296
TYN+L+ +E K+ + M + G ++P++ +Y +L+ A+ +R EA V +
Sbjct: 120 TYNTLIKGYGIAGKPEESVKLLELMSQEGNVKPNLRTYNVLVRAWCNKKRITEAWNVVYK 179
Query: 297 MLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASD 356
M+ +G++P YN + A+A G +DQA V M+ + P+ + ++S Y
Sbjct: 180 MIASGIQPDVVTYNTIATAYAQKGALDQAEGVILEMQNNGVQPNERTCGIIMSGYCKEGR 239
Query: 357 MEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTT 416
+ A +F R+K+ G PN++ + +LIKG+ + + + + E+ + M G+KP+ F+T
Sbjct: 240 IREALRFAYRMKELGIHPNLVIFNSLIKGFVAIMDRDGVDEVLNLMEEFGVKPDVITFST 299
Query: 417 IMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPN 476
IM+A+ + + +M G PD A +IL A E +A ELL
Sbjct: 300 IMNAWSTAGFMEKCREIFDDMVKAGIEPDAHAYSILAKGYVRAQEPEKAEELLTTMIKSG 359
Query: 477 NEPGI 481
+P +
Sbjct: 360 FQPNV 364
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 87/353 (24%), Positives = 182/353 (51%), Gaps = 13/353 (3%)
Query: 97 MDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRR 156
M+FL+ ++G +AE + + + G+ PS++S+T L+ A R+ + +I +
Sbjct: 20 MNFLV------EKGKPQEAESIFYSLIEGGHKPSLISYTTLLAALTMQKRFDSIYSIISQ 73
Query: 157 MQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKK 216
++ +G P ++ + ++ F E+ + A E F + +++ +KP ++ +I Y
Sbjct: 74 VEENGMNPDSIFFNAVINAFSESGNMESAMETFWKM---QENGMKPTTSTYNTLIKGYGI 130
Query: 217 AGGYEKARKLFALMAERG-VQQSTVTYNSLMSFETNYKEVSKIYD---QMQRAGLQPDVV 272
AG E++ KL LM++ G V+ + TYN L+ N K +++ ++ +M +G+QPDVV
Sbjct: 131 AGKPEESVKLLELMSQEGNVKPNLRTYNVLVRAWCNKKRITEAWNVVYKMIASGIQPDVV 190
Query: 273 SYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCM 332
+Y + AY + ++A V EM + GV+P + I++ + G + +A M
Sbjct: 191 TYNTIATAYAQKGALDQAEGVILEMQNNGVQPNERTCGIIMSGYCKEGRIREALRFAYRM 250
Query: 333 RRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNL 392
+ P++ + +++ +V D +G ++ +++ G P+VIT+ T++ ++ +
Sbjct: 251 KELGIHPNLVIFNSLIKGFVAIMDRDGVDEVLNLMEEFGVKPDVITFSTIMNAWSTAGFM 310
Query: 393 EKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPD 445
EK EI+D M GI+P+ ++ + Y + ++ + A M GF P+
Sbjct: 311 EKCREIFDDMVKAGIEPDAHAYSILAKGYVRAQEPEKAEELLTTMIKSGFQPN 363
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 82/324 (25%), Positives = 169/324 (52%), Gaps = 7/324 (2%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKG-YAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSS 160
LI YG G ++ K+L M+++G P++ ++ L+ A+ R A + +M +S
Sbjct: 124 LIKGYGIAGKPEESVKLLELMSQEGNVKPNLRTYNVLVRAWCNKKRITEAWNVVYKMIAS 183
Query: 161 GPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGY 220
G +P +TY I + + +AE V +L+ + + ++P+++ +++ Y K G
Sbjct: 184 GIQPDVVTYNTIATAYAQKGALDQAEGV---ILEMQNNGVQPNERTCGIIMSGYCKEGRI 240
Query: 221 EKARKLFALMAERGVQQSTVTYNSLMSFETNYKE---VSKIYDQMQRAGLQPDVVSYALL 277
+A + M E G+ + V +NSL+ + V ++ + M+ G++PDV++++ +
Sbjct: 241 REALRFAYRMKELGIHPNLVIFNSLIKGFVAIMDRDGVDEVLNLMEEFGVKPDVITFSTI 300
Query: 278 INAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRC 337
+NA+ A E+ +F++M+ AG+ P AY+IL + + ++A + M +
Sbjct: 301 MNAWSTAGFMEKCREIFDDMVKAGIEPDAHAYSILAKGYVRAQEPEKAEELLTTMIKSGF 360
Query: 338 SPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMME 397
P++ +TT++S + +A M+ A + F ++ Q G PN+ T+ TLI G+A+ K E
Sbjct: 361 QPNVVIFTTVISGWCSAGKMDYAVRVFDKMCQRGISPNLKTFETLIWGFAEARQPWKAEE 420
Query: 398 IYDKMRVNGIKPNQTIFTTIMDAY 421
I M ++P ++ + +A+
Sbjct: 421 ILQIMTEFEVQPEKSTMLLVAEAW 444
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/234 (21%), Positives = 116/234 (49%), Gaps = 6/234 (2%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
NE ++++ Y K+G +A + M + G P++V +L++ + + +
Sbjct: 223 NERTCGIIMSGYCKEGRIREALRFAYRMKELGIHPNLVIFNSLIKGFVAIMDRDGVDEVL 282
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
M+ G +P +T+ I+ + A ++ E+F D K+ ++PD + ++ Y
Sbjct: 283 NLMEEFGVKPDVITFSTIMNAWSTAGFMEKCREIFD---DMVKAGIEPDAHAYSILAKGY 339
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVS---KIYDQMQRAGLQPDV 271
+A EKA +L M + G Q + V + +++S + ++ +++D+M + G+ P++
Sbjct: 340 VRAQEPEKAEELLTTMIKSGFQPNVVIFTTVISGWCSAGKMDYAVRVFDKMCQRGISPNL 399
Query: 272 VSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQA 325
++ LI + +AR+ +A + + M + V+P ++ +A+ +GM +A
Sbjct: 400 KTFETLIWGFAEARQPWKAEEILQIMTEFEVQPEKSTMLLVAEAWRATGMTKEA 453
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/130 (23%), Positives = 67/130 (51%), Gaps = 3/130 (2%)
Query: 99 FLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQ 158
+ +L Y + + KAE++L+ M K G+ P+VV T ++ + G+ A +F +M
Sbjct: 332 YSILAKGYVRAQEPEKAEELLTTMIKSGFQPNVVIFTTVISGWCSAGKMDYAVRVFDKMC 391
Query: 159 SSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAG 218
G P+ T++ ++ F EA + +AEE+ + + E ++P++ ++ ++ G
Sbjct: 392 QRGISPNLKTFETLIWGFAEARQPWKAEEILQIMTEFE---VQPEKSTMLLVAEAWRATG 448
Query: 219 GYEKARKLFA 228
++A +L
Sbjct: 449 MTKEANRLLG 458
>gi|224130398|ref|XP_002320827.1| predicted protein [Populus trichocarpa]
gi|222861600|gb|EEE99142.1| predicted protein [Populus trichocarpa]
Length = 775
Score = 152 bits (383), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 99/349 (28%), Positives = 175/349 (50%), Gaps = 10/349 (2%)
Query: 82 VLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAY 141
++E +R Q + + + LI + K G+ K +++ MNK+G AP+VV+ L+
Sbjct: 405 LMERMRSQKGCAPDTITYNCLIDGFCKAGEIEKGKELFDEMNKEGVAPNVVTVNTLVGGM 464
Query: 142 GRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLK 201
R GR +A F Q G + A+TY ++ F N F++A E+F +L KS
Sbjct: 465 CRTGRVSSAVNFFVEAQRRGMKGDAVTYTALINAFCNVNNFEKAMELFNEML---KSGCS 521
Query: 202 PDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMS--FETN-YKEVSKI 258
PD +++ +I + +AG A + A + + G++ TV YN+L+ TN + V ++
Sbjct: 522 PDAIVYYTLISGFSQAGRMADASFVLAELKKLGIRPDTVCYNTLIGGFCRTNKFHRVFEM 581
Query: 259 YDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAI 318
+M+ AGL+PD ++Y LI K + A V +M+ AGV PT Y +++A+ +
Sbjct: 582 LKEMEEAGLKPDTITYNTLIAYASKNGDLKFAQKVMRKMIKAGVVPTVATYGAVINAYCL 641
Query: 319 SGMVDQARTVFKCMR-RDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVI 377
+G ++A +FK M+ + P+ Y ++++ + ++ A +K G PN
Sbjct: 642 NGNGNEAMEIFKDMKAASKVPPNTVIYNILINSLCKNNKVKSAVSLMEDMKIWGVTPNTT 701
Query: 378 TYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQT---IFTTIMDAYGK 423
TY + KG +LEK+ E D+M + P+ I T + A G+
Sbjct: 702 TYNAIFKGLRDEKDLEKVFEFMDRMIEHACNPDYITMEILTEWLSAVGE 750
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 86/331 (25%), Positives = 160/331 (48%), Gaps = 10/331 (3%)
Query: 129 PSVVSHTALMEAYGRGGRYKNAEAIFRRMQSS-GPRPSALTYQIILKLFVEANKFKEAEE 187
P VV + L++ + GR + + RM+S G P +TY ++ F +A + ++ +E
Sbjct: 381 PDVVIYNTLIDGLCKVGRQQEGLGLMERMRSQKGCAPDTITYNCLIDGFCKAGEIEKGKE 440
Query: 188 VFMTLLDE-EKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLM 246
+F DE K + P+ + ++ + G A F RG++ VTY +L+
Sbjct: 441 LF----DEMNKEGVAPNVVTVNTLVGGMCRTGRVSSAVNFFVEAQRRGMKGDAVTYTALI 496
Query: 247 SF---ETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVR 303
+ N+++ +++++M ++G PD + Y LI+ + +A R +A V E+ G+R
Sbjct: 497 NAFCNVNNFEKAMELFNEMLKSGCSPDAIVYYTLISGFSQAGRMADASFVLAELKKLGIR 556
Query: 304 PTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKF 363
P YN L+ F + + + K M PD +Y T+++ D++ A+K
Sbjct: 557 PDTVCYNTLIGGFCRTNKFHRVFEMLKEMEEAGLKPDTITYNTLIAYASKNGDLKFAQKV 616
Query: 364 FRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMR-VNGIKPNQTIFTTIMDAYG 422
R++ + G VP V TYG +I Y N + MEI+ M+ + + PN I+ ++++
Sbjct: 617 MRKMIKAGVVPTVATYGAVINAYCLNGNGNEAMEIFKDMKAASKVPPNTVIYNILINSLC 676
Query: 423 KNKDFDSAVVWYKEMESCGFPPDQKAKNILL 453
KN SAV ++M+ G P+ N +
Sbjct: 677 KNNKVKSAVSLMEDMKIWGVTPNTTTYNAIF 707
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 90/387 (23%), Positives = 169/387 (43%), Gaps = 9/387 (2%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
LIT + N+ + + M K G + +L+ R G + + +M
Sbjct: 276 LITRLCRNRKTNRGWDLFTEMIKLGAVLESAACNSLLTGLAREGNFNRMNELMEKMVEMD 335
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKS-----PLKPDQKMFHMMIYMYKK 216
+P+ +T+ I++ + + +A EV + ++S ++PD +++ +I K
Sbjct: 336 IQPNVVTFGILINHMCKFRRVDDALEVLEKMSGGKESGGISVSVEPDVVIYNTLIDGLCK 395
Query: 217 AGGYEKARKLFALM-AERGVQQSTVTYNSLMSFETNYKEVSK---IYDQMQRAGLQPDVV 272
G ++ L M +++G T+TYN L+ E+ K ++D+M + G+ P+VV
Sbjct: 396 VGRQQEGLGLMERMRSQKGCAPDTITYNCLIDGFCKAGEIEKGKELFDEMNKEGVAPNVV 455
Query: 273 SYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCM 332
+ L+ + R A+ F E G++ Y L++AF ++A +F M
Sbjct: 456 TVNTLVGGMCRTGRVSSAVNFFVEAQRRGMKGDAVTYTALINAFCNVNNFEKAMELFNEM 515
Query: 333 RRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNL 392
+ CSPD Y T++S + A M A LK+ G P+ + Y TLI G+ + N
Sbjct: 516 LKSGCSPDAIVYYTLISGFSQAGRMADASFVLAELKKLGIRPDTVCYNTLIGGFCRTNKF 575
Query: 393 EKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNIL 452
++ E+ +M G+KP+ + T++ KN D A ++M G P +
Sbjct: 576 HRVFEMLKEMEEAGLKPDTITYNTLIAYASKNGDLKFAQKVMRKMIKAGVVPTVATYGAV 635
Query: 453 LSLAKTADERNEANELLGNFNHPNNEP 479
++ NEA E+ + + P
Sbjct: 636 INAYCLNGNGNEAMEIFKDMKAASKVP 662
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 77/279 (27%), Positives = 137/279 (49%), Gaps = 23/279 (8%)
Query: 97 MDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRR 156
+ + LI A+ +F KA ++ + M K G +P + + L+ + + GR +A +
Sbjct: 490 VTYTALINAFCNVNNFEKAMELFNEMLKSGCSPDAIVYYTLISGFSQAGRMADASFVLAE 549
Query: 157 MQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKK 216
++ G RP + Y ++ F NKF VF L + E++ LKPD ++ +I K
Sbjct: 550 LKKLGIRPDTVCYNTLIGGFCRTNKF---HRVFEMLKEMEEAGLKPDTITYNTLIAYASK 606
Query: 217 AGGYEKARKLFALMAERGVQQSTVTYNSLMS---FETNYKEVSKIYDQMQRAG-LQPDVV 272
G + A+K+ M + GV + TY ++++ N E +I+ M+ A + P+ V
Sbjct: 607 NGDLKFAQKVMRKMIKAGVVPTVATYGAVINAYCLNGNGNEAMEIFKDMKAASKVPPNTV 666
Query: 273 SYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQ--ARTVFK 330
Y +LIN+ K + + A+++ E+M GV P YN + G+ D+ VF+
Sbjct: 667 IYNILINSLCKNNKVKSAVSLMEDMKIWGVTPNTTTYNAIFK-----GLRDEKDLEKVFE 721
Query: 331 CMRR---DRCSPDICSYTTM--LSAYVNA-SDMEGAEKF 363
M R C+PD Y TM L+ +++A ++E +KF
Sbjct: 722 FMDRMIEHACNPD---YITMEILTEWLSAVGEIERLKKF 757
>gi|8920567|gb|AAF81289.1|AC027656_6 Contains similarity to a hypothetical protein F23N19.4 gi|6630464
from Arabidopsis thaliana BAC F23N19 gb|AC007190. It
contains a PPR repeat domain PF|01535 [Arabidopsis
thaliana]
Length = 797
Score = 152 bits (383), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 98/375 (26%), Positives = 177/375 (47%), Gaps = 9/375 (2%)
Query: 85 WLRIQSWWDF--NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYG 142
+LR W D + + F +++ Y K G + A+ + K G PSV SH L+
Sbjct: 222 FLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCTVLKCGLVPSVYSHNILINGLC 281
Query: 143 RGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKP 202
G A + M G P ++TY I+ K F A EV +LD+ L P
Sbjct: 282 LVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDK---GLSP 338
Query: 203 DQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLM----SFETNYKEVSKI 258
D + +++ + G + L M RG + +++ S+M E +
Sbjct: 339 DVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSL 398
Query: 259 YDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAI 318
++QM+ GL PD+V+Y+++I+ K + + AL +++EM D + P + + LL
Sbjct: 399 FNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQ 458
Query: 319 SGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVIT 378
GM+ +AR++ + + DI Y ++ Y + +E A + F+ + + G P+V T
Sbjct: 459 KGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVAT 518
Query: 379 YGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEME 438
+ +LI GY K N+ + +I D +++ G+ P+ +TT+MDAY + S +EM+
Sbjct: 519 FNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMK 578
Query: 439 SCGFPPDQKAKNILL 453
+ G PP +++
Sbjct: 579 AEGIPPTNVTYSVIF 593
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 87/370 (23%), Positives = 174/370 (47%), Gaps = 21/370 (5%)
Query: 101 MLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSS 160
+L + G + A +V+ M KG +P V+++T L+ + G + + M S
Sbjct: 310 ILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSR 369
Query: 161 G-PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKS-PLKPDQKMFHMMIYMYKKAG 218
G S + ++L + + EA ++L ++ K+ L PD + ++I+ K G
Sbjct: 370 GFELNSIIPCSVMLSGLCKTGRIDEA----LSLFNQMKADGLSPDLVAYSIVIHGLCKLG 425
Query: 219 GYEKARKLFALMAERGVQQSTVTYNSLM---SFETNYKEVSKIYDQMQRAGLQPDVVSYA 275
++ A L+ M ++ + ++ T+ +L+ + E + D + +G D+V Y
Sbjct: 426 KFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYN 485
Query: 276 LLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRD 335
++I+ Y K+ EEAL +F+ +++ G+ P+ +N L+ + + + +AR + ++
Sbjct: 486 IVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLY 545
Query: 336 RCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYA---KVNNL 392
+P + SYTT++ AY N + + ++ R +K +G P +TY + KG K N
Sbjct: 546 GLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENC 605
Query: 393 EKMM--EIYDK-------MRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFP 443
++ I++K M GI P+Q + TI+ + K A V+ + M+S
Sbjct: 606 NHVLRERIFEKCKQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLD 665
Query: 444 PDQKAKNILL 453
NIL+
Sbjct: 666 ASSATYNILI 675
Score = 101 bits (252), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 79/357 (22%), Positives = 155/357 (43%), Gaps = 18/357 (5%)
Query: 101 MLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSS 160
++++ K G ++A + + M G +P +V+++ ++ + G++ A ++ M
Sbjct: 381 VMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDK 440
Query: 161 GPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGY 220
P++ T+ +L + EA + +L+ ++ D +++++I Y K+G
Sbjct: 441 RILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETL---DIVLYNIVIDGYAKSGCI 497
Query: 221 EKARKLFALMAERGVQQSTVTYNSLM---SFETNYKEVSKIYDQMQRAGLQPDVVSYALL 277
E+A +LF ++ E G+ S T+NSL+ N E KI D ++ GL P VVSY L
Sbjct: 498 EEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTL 557
Query: 278 INAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAI------SGMVDQARTVFKC 331
++AY + + EM G+ PT+ Y+++ V + R KC
Sbjct: 558 MDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKC 617
Query: 332 ------MRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKG 385
M + PD +Y T++ + GA F +K + TY LI
Sbjct: 618 KQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDS 677
Query: 386 YAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGF 442
+ K ++ + ++ +TT++ A+ D + AV + ++ GF
Sbjct: 678 LCVYGYIRKADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMAVKLFHQLLHRGF 734
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 75/363 (20%), Positives = 147/363 (40%), Gaps = 53/363 (14%)
Query: 101 MLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSS 160
++I K G F+ A + M K P+ +H AL+ + G A ++ + SS
Sbjct: 416 IVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISS 475
Query: 161 GPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGY 220
G + Y I++ + ++ +EA E+F +++ + + P F+ +IY Y K
Sbjct: 476 GETLDIVLYNIVIDGYAKSGCIEEALELFKVVIE---TGITPSVATFNSLIYGYCKTQNI 532
Query: 221 EKARKLFALMAERGVQQSTVTYNSLM-----------------------------SFETN 251
+ARK+ ++ G+ S V+Y +LM ++
Sbjct: 533 AEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVI 592
Query: 252 YKEVSK--------------IYDQ-------MQRAGLQPDVVSYALLINAYGKARREEEA 290
+K + + I+++ M+ G+ PD ++Y +I + + A
Sbjct: 593 FKGLCRGWKHENCNHVLRERIFEKCKQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGA 652
Query: 291 LAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSA 350
E M + + YNIL+D+ + G + +A + ++ S +YTT++ A
Sbjct: 653 FVFLEIMKSRNLDASSATYNILIDSLCVYGYIRKADSFIYSLQEQNVSLSKFAYTTLIKA 712
Query: 351 YVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPN 410
+ D E A K F +L GF ++ Y +I + + + + + M GI P+
Sbjct: 713 HCVKGDPEMAVKLFHQLLHRGFNVSIRDYSAVINRLCRRHLVNESKFFFCLMLSQGISPD 772
Query: 411 QTI 413
I
Sbjct: 773 LDI 775
Score = 45.8 bits (107), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 59/261 (22%), Positives = 105/261 (40%), Gaps = 29/261 (11%)
Query: 220 YEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSKIYDQMQRAGLQPDVVSYALLIN 279
+++ R ++A R ST+ + +++ + +KE+ I +Q+ LQ +
Sbjct: 71 FKELRDIYAF---RHSSFSTLLVSHVLAGQRRFKELQVILEQL----LQEE--------- 114
Query: 280 AYGKARREEEALA-VFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCS 338
G A R E L+ F + G+ +++LL + MVD + + K M+ +
Sbjct: 115 GSGSASRLCELLSNSFRKWESTGL-----VWDMLLFLSSRLRMVDDSLYILKKMKDQNLN 169
Query: 339 PDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEI 398
SY ++L + M ++ +K N TY T++ G + LE +
Sbjct: 170 VSTQSYNSVLYHFRETDKMWDV---YKEIKD----KNEHTYSTVVDGLCRQQKLEDAVLF 222
Query: 399 YDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKT 458
I P+ F +IM Y K D A ++ + CG P + NIL++
Sbjct: 223 LRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCTVLKCGLVPSVYSHNILINGLCL 282
Query: 459 ADERNEANELLGNFNHPNNEP 479
EA EL + N EP
Sbjct: 283 VGSIAEALELASDMNKHGVEP 303
>gi|255661134|gb|ACU25736.1| pentatricopeptide repeat-containing protein [Verbena bracteata]
gi|255661138|gb|ACU25738.1| pentatricopeptide repeat-containing protein [Verbena halei]
gi|255661140|gb|ACU25739.1| pentatricopeptide repeat-containing protein [Verbena officinalis]
Length = 426
Score = 152 bits (383), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 98/374 (26%), Positives = 183/374 (48%), Gaps = 37/374 (9%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
LI K D++KA + S + + G+ P +V++ A++ +G+ ++ A ++ M+++G
Sbjct: 50 LIELSRKLCDYSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMRTAG 109
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
P+ +Y +L ++VE KF EA VF + E K L D ++MI +Y + G +
Sbjct: 110 VTPNTASYSTLLTMYVENKKFLEALSVFAEM-REIKCLL--DLTTCNIMIDVYGQLGMAK 166
Query: 222 KARKLFALMAERGVQQSTVTYNSLMSFETN---YKEVSKIYDQMQRAGLQPDVVSYALLI 278
+A KLF M + G++ + V+YN+L+ + + E ++ MQR ++ +VV+Y ++
Sbjct: 167 EADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMM 226
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCS 338
YGK E+A + +EM + G+ P Y+ ++ + G +D+A +F+ +R
Sbjct: 227 MIYGKTLEHEKANNLIQEMQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVD 286
Query: 339 PDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVP------------------------ 374
D Y TM+ AY A + A++ LK+ +P
Sbjct: 287 IDQVLYQTMIVAYERAGLVAHAKRLLHELKRPDNIPRDIAIHILAGAGRIEEATWVFRQA 346
Query: 375 -------NVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDF 427
++ + +I ++K ++E++DKMR G P+ + I++AYGK +F
Sbjct: 347 IDAGEVKDITVFERMIHLFSKYKKYGNVVEVFDKMRGLGYFPDSNVIALILNAYGKLHEF 406
Query: 428 DSAVVWYKEMESCG 441
D A Y EM+ G
Sbjct: 407 DKANDVYMEMQEVG 420
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 85/318 (26%), Positives = 146/318 (45%), Gaps = 38/318 (11%)
Query: 200 LKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFE---TNYKEVS 256
L PD+ + +I + K G ++ A M + V V Y++L+ +Y +
Sbjct: 5 LSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDYSKAI 64
Query: 257 KIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAF 316
I+ +++R+G PD+V+Y +IN +GKA+ EA ++ EM AGV P +Y+ LL +
Sbjct: 65 SIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVTPNTASYSTLLTMY 124
Query: 317 AISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNV 376
+ +A +VF MR +C D+ + M+ Y + A+K F +++ G PNV
Sbjct: 125 VENKKFLEALSVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNV 184
Query: 377 ITYGTLIKGYA---------------KVNNLEK-------MMEIYDK------------- 401
++Y TL++ Y + N+E+ MM IY K
Sbjct: 185 VSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLIQE 244
Query: 402 MRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADE 461
M+ GI+PN ++TI+ +GK D A + ++++ S G DQ ++ + A
Sbjct: 245 MQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVDIDQVLYQTMIVAYERAGL 304
Query: 462 RNEANELLGNFNHPNNEP 479
A LL P+N P
Sbjct: 305 VAHAKRLLHELKRPDNIP 322
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 45/181 (24%), Positives = 79/181 (43%)
Query: 301 GVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGA 360
+ P Y+ L+ F G+ D A + + M +DR D+ Y+ ++ D A
Sbjct: 4 ALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDYSKA 63
Query: 361 EKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDA 420
F RLK+ GF P+++ Y +I + K + + +MR G+ PN ++T++
Sbjct: 64 ISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVTPNTASYSTLLTM 123
Query: 421 YGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPG 480
Y +NK F A+ + EM D NI++ + EA++L EP
Sbjct: 124 YVENKKFLEALSVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPN 183
Query: 481 I 481
+
Sbjct: 184 V 184
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/244 (22%), Positives = 114/244 (46%), Gaps = 6/244 (2%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + + L+ YG F +A + M +K +VV++ ++M YG+ ++ A +
Sbjct: 183 NVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLI 242
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
+ MQ+ G P+++TY I+ ++ + K A +F L S + DQ ++ MI Y
Sbjct: 243 QEMQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKL---RSSGVDIDQVLYQTMIVAY 299
Query: 215 KKAGGYEKARKLFA-LMAERGVQQSTVTYNSLMSFETNYKEVSKIYDQMQRAGLQPDVVS 273
++AG A++L L + + + +++ +E + ++ Q AG D+
Sbjct: 300 ERAGLVAHAKRLLHELKRPDNIPRDIAIH--ILAGAGRIEEATWVFRQAIDAGEVKDITV 357
Query: 274 YALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMR 333
+ +I+ + K ++ + VF++M G P ++L+A+ D+A V+ M+
Sbjct: 358 FERMIHLFSKYKKYGNVVEVFDKMRGLGYFPDSNVIALILNAYGKLHEFDKANDVYMEMQ 417
Query: 334 RDRC 337
C
Sbjct: 418 EVGC 421
Score = 58.5 bits (140), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 28/123 (22%), Positives = 64/123 (52%)
Query: 333 RRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNL 392
R SPD +Y+T+++ + + A + ++++QD +++ Y LI+ K+ +
Sbjct: 1 RERALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDY 60
Query: 393 EKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNIL 452
K + I+ +++ +G P+ + +++ +GK K F A EM + G P+ + + L
Sbjct: 61 SKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVTPNTASYSTL 120
Query: 453 LSL 455
L++
Sbjct: 121 LTM 123
>gi|240254074|ref|NP_172820.4| PPR repeat-containing protein [Arabidopsis thaliana]
gi|332190928|gb|AEE29049.1| PPR repeat-containing protein [Arabidopsis thaliana]
Length = 806
Score = 152 bits (383), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 98/375 (26%), Positives = 177/375 (47%), Gaps = 9/375 (2%)
Query: 85 WLRIQSWWDF--NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYG 142
+LR W D + + F +++ Y K G + A+ + K G PSV SH L+
Sbjct: 209 FLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCTVLKCGLVPSVYSHNILINGLC 268
Query: 143 RGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKP 202
G A + M G P ++TY I+ K F A EV +LD+ L P
Sbjct: 269 LVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDK---GLSP 325
Query: 203 DQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLM----SFETNYKEVSKI 258
D + +++ + G + L M RG + +++ S+M E +
Sbjct: 326 DVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSL 385
Query: 259 YDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAI 318
++QM+ GL PD+V+Y+++I+ K + + AL +++EM D + P + + LL
Sbjct: 386 FNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQ 445
Query: 319 SGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVIT 378
GM+ +AR++ + + DI Y ++ Y + +E A + F+ + + G P+V T
Sbjct: 446 KGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVAT 505
Query: 379 YGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEME 438
+ +LI GY K N+ + +I D +++ G+ P+ +TT+MDAY + S +EM+
Sbjct: 506 FNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMK 565
Query: 439 SCGFPPDQKAKNILL 453
+ G PP +++
Sbjct: 566 AEGIPPTNVTYSVIF 580
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 87/370 (23%), Positives = 174/370 (47%), Gaps = 21/370 (5%)
Query: 101 MLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSS 160
+L + G + A +V+ M KG +P V+++T L+ + G + + M S
Sbjct: 297 ILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSR 356
Query: 161 G-PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKS-PLKPDQKMFHMMIYMYKKAG 218
G S + ++L + + EA ++L ++ K+ L PD + ++I+ K G
Sbjct: 357 GFELNSIIPCSVMLSGLCKTGRIDEA----LSLFNQMKADGLSPDLVAYSIVIHGLCKLG 412
Query: 219 GYEKARKLFALMAERGVQQSTVTYNSLM---SFETNYKEVSKIYDQMQRAGLQPDVVSYA 275
++ A L+ M ++ + ++ T+ +L+ + E + D + +G D+V Y
Sbjct: 413 KFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYN 472
Query: 276 LLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRD 335
++I+ Y K+ EEAL +F+ +++ G+ P+ +N L+ + + + +AR + ++
Sbjct: 473 IVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLY 532
Query: 336 RCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYA---KVNNL 392
+P + SYTT++ AY N + + ++ R +K +G P +TY + KG K N
Sbjct: 533 GLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENC 592
Query: 393 EKMM--EIYDK-------MRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFP 443
++ I++K M GI P+Q + TI+ + K A V+ + M+S
Sbjct: 593 NHVLRERIFEKCKQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLD 652
Query: 444 PDQKAKNILL 453
NIL+
Sbjct: 653 ASSATYNILI 662
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 79/357 (22%), Positives = 155/357 (43%), Gaps = 18/357 (5%)
Query: 101 MLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSS 160
++++ K G ++A + + M G +P +V+++ ++ + G++ A ++ M
Sbjct: 368 VMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDK 427
Query: 161 GPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGY 220
P++ T+ +L + EA + +L+ ++ D +++++I Y K+G
Sbjct: 428 RILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETL---DIVLYNIVIDGYAKSGCI 484
Query: 221 EKARKLFALMAERGVQQSTVTYNSLM---SFETNYKEVSKIYDQMQRAGLQPDVVSYALL 277
E+A +LF ++ E G+ S T+NSL+ N E KI D ++ GL P VVSY L
Sbjct: 485 EEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTL 544
Query: 278 INAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAI------SGMVDQARTVFKC 331
++AY + + EM G+ PT+ Y+++ V + R KC
Sbjct: 545 MDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKC 604
Query: 332 ------MRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKG 385
M + PD +Y T++ + GA F +K + TY LI
Sbjct: 605 KQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDS 664
Query: 386 YAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGF 442
+ K ++ + ++ +TT++ A+ D + AV + ++ GF
Sbjct: 665 LCVYGYIRKADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMAVKLFHQLLHRGF 721
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 84/407 (20%), Positives = 161/407 (39%), Gaps = 73/407 (17%)
Query: 37 QIEEVGSAVAVLRSERTRGQPLPKDLVLGTLVRLKQLKKWNVVSEVLEWLRIQSWWDFNE 96
Q+ + + +L+ +RG L ++ V L L K + E L FN+
Sbjct: 339 QLGNIDMGLVLLKDMLSRGFELNS--IIPCSVMLSGLCKTGRIDEALSL--------FNQ 388
Query: 97 MD----------FLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGR 146
M + ++I K G F+ A + M K P+ +H AL+ + G
Sbjct: 389 MKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGM 448
Query: 147 YKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKM 206
A ++ + SSG + Y I++ + ++ +EA E+F +++ + + P
Sbjct: 449 LLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIE---TGITPSVAT 505
Query: 207 FHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLM-------------------- 246
F+ +IY Y K +ARK+ ++ G+ S V+Y +LM
Sbjct: 506 FNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMK 565
Query: 247 ---------SFETNYKEVSK--------------IYDQ-------MQRAGLQPDVVSYAL 276
++ +K + + I+++ M+ G+ PD ++Y
Sbjct: 566 AEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQGLRDMESEGIPPDQITYNT 625
Query: 277 LINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDR 336
+I + + A E M + + YNIL+D+ + G + +A + ++
Sbjct: 626 IIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDSLCVYGYIRKADSFIYSLQEQN 685
Query: 337 CSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLI 383
S +YTT++ A+ D E A K F +L GF ++ Y +I
Sbjct: 686 VSLSKFAYTTLIKAHCVKGDPEMAVKLFHQLLHRGFNVSIRDYSAVI 732
Score = 47.8 bits (112), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 55/233 (23%), Positives = 93/233 (39%), Gaps = 18/233 (7%)
Query: 252 YKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEML-DAGV----RPTH 306
+KE+ IY + + +VS+ L RR +E + E++L + G T
Sbjct: 71 FKELRDIY-AFRHSSFSTLLVSHVL-----AGQRRFKELQVILEQLLQEEGTFRKWESTG 124
Query: 307 KAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRR 366
+++LL + MVD + + K M+ + SY ++L + M ++
Sbjct: 125 LVWDMLLFLSSRLRMVDDSLYILKKMKDQNLNVSTQSYNSVLYHFRETDKMWDV---YKE 181
Query: 367 LKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKD 426
+K N TY T++ G + LE + I P+ F +IM Y K
Sbjct: 182 IKD----KNEHTYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGF 237
Query: 427 FDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEP 479
D A ++ + CG P + NIL++ EA EL + N EP
Sbjct: 238 VDMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEP 290
>gi|32489931|emb|CAE05523.1| OSJNBa0038P21.16 [Oryza sativa Japonica Group]
gi|38347491|emb|CAE05839.2| OSJNBa0091C07.1 [Oryza sativa Japonica Group]
Length = 844
Score = 152 bits (383), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 99/403 (24%), Positives = 197/403 (48%), Gaps = 11/403 (2%)
Query: 58 LPKDLVLGTLVR-LKQLKKWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAE 116
LPK L+ ++++ L ++K+ + +++ + + S + + ++I K +KAE
Sbjct: 242 LPKILICNSIIKELCKMKEMDKAESIVQKM-VDSGIAPDLFTYSLIIDGLCKSKAMDKAE 300
Query: 117 KVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLF 176
+VL M + G P+ +++ +L+ Y G + + +F++M S G P+ +
Sbjct: 301 RVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQMSSCGVIPTVDNCNSFIHAL 360
Query: 177 VEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKA--GGYEKARKLFALMAERG 234
+ + EA+ +F +++ K P KPD + M++ Y A +F LM +G
Sbjct: 361 FKHGRTNEAKCIFDSMV--LKGP-KPDIISYSTMLHGYATATDSCLADVHNIFNLMLTKG 417
Query: 235 VQQSTVTYNSLMSFETNYKEVSK---IYDQMQRAGLQPDVVSYALLINAYGKARREEEAL 291
+ + +N L++ + K I++ MQ G+ PD V++A +I++ + R ++AL
Sbjct: 418 IAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDAL 477
Query: 292 AVFEEMLDAGVRPTHKAYNILLDAFAISG-MVDQARTVFKCMRRDRCSPDICSYTTMLSA 350
F M+D GV P+ Y L+ G +V + + M +D P + ++++++
Sbjct: 478 HKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSIINN 537
Query: 351 YVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPN 410
+ + + Q G PNV+T+ +L++GY V N+E+ + D M GI+PN
Sbjct: 538 LCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPN 597
Query: 411 QTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILL 453
I+ T++D Y KN D A+ +++M G P +I+L
Sbjct: 598 CYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIIL 640
Score = 138 bits (348), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 100/361 (27%), Positives = 165/361 (45%), Gaps = 48/361 (13%)
Query: 153 IFRRMQS-SGPR---PSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFH 208
+F+RM + PR P+ TY I++ + ++ + LL K+ L PD +
Sbjct: 159 LFKRMDRWACPRHSPPTIHTYNILIDCYRRVHRPDLGLAIVGRLL---KNGLGPDDFSYS 215
Query: 209 MMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSK---IYDQMQRA 265
+ IY + K G +KA LF M E+GV + NS++ KE+ K I +M +
Sbjct: 216 L-IYGFVKDGEVDKAHCLFLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDS 274
Query: 266 GLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQA 325
G+ PD+ +Y+L+I+ K++ ++A V E+M++AG RP YN L+ ++ISGM +++
Sbjct: 275 GIAPDLFTYSLIIDGLCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNES 334
Query: 326 RTVFKCMRR-------DRCS----------------------------PDICSYTTMLSA 350
VFK M D C+ PDI SY+TML
Sbjct: 335 VRVFKQMSSCGVIPTVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHG 394
Query: 351 YVNASD--MEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIK 408
Y A+D + F + G PN + LI YA+ ++K M I++ M+ G+
Sbjct: 395 YATATDSCLADVHNIFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMI 454
Query: 409 PNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANEL 468
P+ F T++ + + D A+ + M G PP + L+ E +A EL
Sbjct: 455 PDTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKEL 514
Query: 469 L 469
+
Sbjct: 515 I 515
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 94/376 (25%), Positives = 170/376 (45%), Gaps = 9/376 (2%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N+ F +LI AY + G +KA + M KG P V+ ++ + R GR +A F
Sbjct: 421 NKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHKF 480
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
M G PS Y +++ + +A+E+ +++++ P P K F +I
Sbjct: 481 NHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPP--PGVKYFSSIINNL 538
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSLM---SFETNYKEVSKIYDQMQRAGLQPDV 271
K G + + + +M + G + + VT+NSLM N +E + D M G++P+
Sbjct: 539 CKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNC 598
Query: 272 VSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKC 331
Y L++ Y K R ++AL VF +ML GV+PT Y+I+L + A+ +F
Sbjct: 599 YIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTAAKKMFHE 658
Query: 332 MRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNN 391
M + I +Y +L + + A +L ++IT+ +I KV
Sbjct: 659 MIESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISAMFKVGR 718
Query: 392 LEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKN- 450
++ E++D + G+ PN ++ ++ K + ++ A + +E G D + N
Sbjct: 719 RQEAKELFDAISTYGLVPNIQTYSMMITNLIKEESYEEADNLFISVEKSGHASDSRLLNH 778
Query: 451 ---ILLSLAKTADERN 463
+LL+ A+ A N
Sbjct: 779 IVRMLLNKAEVAKASN 794
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 83/359 (23%), Positives = 152/359 (42%), Gaps = 7/359 (1%)
Query: 115 AEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILK 174
+ + M KG AP+ L+ AY R G A IF MQ+ G P +T+ ++
Sbjct: 406 VHNIFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVIS 465
Query: 175 LFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERG 234
+ +A F ++D + P + ++ +I G KA++L + M +
Sbjct: 466 SLCRIGRLDDALHKFNHMVD---IGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKD 522
Query: 235 VQQSTVTYNSL----MSFETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEA 290
+ V Y S + E E I D M + G +P+VV++ L+ Y EEA
Sbjct: 523 IPPPGVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEA 582
Query: 291 LAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSA 350
A+ + M G+ P Y L+D + +G +D A TVF+ M P Y+ +L
Sbjct: 583 FALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHG 642
Query: 351 YVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPN 410
A A+K F + + G ++ TYG ++ G + N ++ + +K+ +K +
Sbjct: 643 LFQARRTTAAKKMFHEMIESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFD 702
Query: 411 QTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELL 469
F ++ A K A + + + G P+ + +++++ + EA+ L
Sbjct: 703 IITFNIVISAMFKVGRRQEAKELFDAISTYGLVPNIQTYSMMITNLIKEESYEEADNLF 761
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 102/499 (20%), Positives = 202/499 (40%), Gaps = 50/499 (10%)
Query: 61 DLVLGTLVRLKQLKKWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLS 120
L++ L + K + K VLE + +++ N + + LI Y G +N++ +V
Sbjct: 284 SLIIDGLCKSKAMDK---AERVLEQM-VEAGTRPNSITYNSLIHGYSISGMWNESVRVFK 339
Query: 121 FMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEA- 179
M+ G P+V + + + A + GR A+ IF M GP+P ++Y +L + A
Sbjct: 340 QMSSCGVIPTVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYATAT 399
Query: 180 -NKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQS 238
+ + +F +L + + P++ +F+++I Y + G +KA +F M +G+
Sbjct: 400 DSCLADVHNIFNLMLTKG---IAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPD 456
Query: 239 TVT-----------------------------------YNSLMSFETNYKEVSK----IY 259
TVT Y L+ N+ E+ K I
Sbjct: 457 TVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELIS 516
Query: 260 DQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAIS 319
+ M + P V ++ +IN K R E + + M+ G RP +N L++ + +
Sbjct: 517 EMMNKDIPPPGVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLV 576
Query: 320 GMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITY 379
G +++A + M P+ Y T++ Y ++ A FR + G P + Y
Sbjct: 577 GNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLY 636
Query: 380 GTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMES 439
++ G + +++ +M +G + + ++ +N D A + +++ +
Sbjct: 637 SIILHGLFQARRTTAAKKMFHEMIESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFA 696
Query: 440 CGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGINGLSISVDEEDDDDDDDE 499
D NI++S R EA EL + P I S+ + ++ +E
Sbjct: 697 MNVKFDIITFNIVISAMFKVGRRQEAKELFDAISTYGLVPNIQTYSMMITNLIKEESYEE 756
Query: 500 DDDDNIYHDGDGDGDGDDN 518
DN++ + G D+
Sbjct: 757 --ADNLFISVEKSGHASDS 773
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/238 (23%), Positives = 103/238 (43%), Gaps = 1/238 (0%)
Query: 269 PDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTV 328
P + +Y +LI+ Y + R + LA+ +L G+ P +Y+ L+ F G VD+A +
Sbjct: 174 PTIHTYNILIDCYRRVHRPDLGLAIVGRLLKNGLGPDDFSYS-LIYGFVKDGEVDKAHCL 232
Query: 329 FKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAK 388
F M P I +++ +M+ AE +++ G P++ TY +I G K
Sbjct: 233 FLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSGIAPDLFTYSLIIDGLCK 292
Query: 389 VNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKA 448
++K + ++M G +PN + +++ Y + ++ +V +K+M SCG P
Sbjct: 293 SKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQMSSCGVIPTVDN 352
Query: 449 KNILLSLAKTADERNEANELLGNFNHPNNEPGINGLSISVDEEDDDDDDDEDDDDNIY 506
N + NEA + + +P I S + D D NI+
Sbjct: 353 CNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYATATDSCLADVHNIF 410
>gi|22296415|dbj|BAC10183.1| pentatricopeptide repeat protein-like [Oryza sativa Japonica Group]
Length = 624
Score = 152 bits (383), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 107/393 (27%), Positives = 186/393 (47%), Gaps = 28/393 (7%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
LI + K G KA V+ M ++G P+VV++ L+ + G K A + ++M G
Sbjct: 226 LIDSLCKVGKAKKAHGVMDMMVRRGLEPNVVTYNVLINCMCKEGSVKEAIGVLKKMSEKG 285
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEE---KSPLKPDQKMFHMMIYMYKKAG 218
P +TY ++K + + EA M LL+E K+ +KP+ F+ +I G
Sbjct: 286 VAPDVVTYNTLIKGLSDVLEMDEA----MWLLEEMVRGKNIVKPNVVTFNSVIQGLCDIG 341
Query: 219 GYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSK---IYDQMQRAGLQPDVVSYA 275
+A ++ A+M E G + VTYN L+ +V K + D+M GL+PD +Y+
Sbjct: 342 RMRQAFQVRAMMEETGCMVNLVTYNLLIGGLLRVHKVRKAMELMDEMTSLGLEPDSFTYS 401
Query: 276 LLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRD 335
+LI + K + + A + M D G+ P Y LL A GM+++AR +F M D
Sbjct: 402 ILIKGFCKMWQVDRAEDLLSTMRDRGIEPELFHYIPLLVAMCEQGMMERARNLFNEM--D 459
Query: 336 RCSP-DICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEK 394
P D+ +Y+TM+ A D++ A++ + + +G P+ +TY +I +AK ++E
Sbjct: 460 NNFPLDVVAYSTMIHGACKAGDLKTAKELLKSIVDEGLTPDAVTYSIVINMFAKSGDMEA 519
Query: 395 MMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLS 454
+ +M +G P+ +F +++ Y + + + +EM + D K I+ +
Sbjct: 520 ANGVLKQMTASGFLPDVAVFDSLIQGYSTKGEINKVLELIREMITKNIALDSK---IIST 576
Query: 455 LAKTADERNEANELL------------GNFNHP 475
L+ + NE LL GN N P
Sbjct: 577 LSTSLVASNEGKALLQSLPDFSAEISKGNINSP 609
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 90/352 (25%), Positives = 177/352 (50%), Gaps = 11/352 (3%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYA---PSVVSHTALMEAYGRGGRYKNAEAIFRRMQ 158
++TA ++G ++A +L M+ + + P+ VS+T LM A A + R M+
Sbjct: 83 VLTALCRRGHHDRAGALLRAMSLEPHPACRPNAVSYTVLMRALCADRLADQAVGLLRSMR 142
Query: 159 SSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAG 218
S+G R +TY +++ +A + +A E+ + + S ++P+ ++ ++ Y K+G
Sbjct: 143 SAGVRADVVTYGTLIRGLCDAAEVDKAVELMGEMCE---SGIEPNVVVYSSLLQGYCKSG 199
Query: 219 GYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSK---IYDQMQRAGLQPDVVSYA 275
+E K+F M+E+G++ V Y L+ + K + D M R GL+P+VV+Y
Sbjct: 200 RWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAKKAHGVMDMMVRRGLEPNVVTYN 259
Query: 276 LLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRD 335
+LIN K +EA+ V ++M + GV P YN L+ + +D+A + + M R
Sbjct: 260 VLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLIKGLSDVLEMDEAMWLLEEMVRG 319
Query: 336 R--CSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLE 393
+ P++ ++ +++ + M A + +++ G + N++TY LI G +V+ +
Sbjct: 320 KNIVKPNVVTFNSVIQGLCDIGRMRQAFQVRAMMEETGCMVNLVTYNLLIGGLLRVHKVR 379
Query: 394 KMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPD 445
K ME+ D+M G++P+ ++ ++ + K D A M G P+
Sbjct: 380 KAMELMDEMTSLGLEPDSFTYSILIKGFCKMWQVDRAEDLLSTMRDRGIEPE 431
Score = 105 bits (263), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 86/362 (23%), Positives = 152/362 (41%), Gaps = 49/362 (13%)
Query: 129 PSV---VSHTALMEAYGRGGRYKNAEAIFRRMQ---SSGPRPSALTYQIILKLFVEANKF 182
PSV VS+ ++ A R G + A A+ R M RP+A++Y ++++ A++
Sbjct: 72 PSVRDAVSYNTVLTALCRRGHHDRAGALLRAMSLEPHPACRPNAVSYTVLMRALC-ADRL 130
Query: 183 KEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTY 242
+ +A L M GV+ VTY
Sbjct: 131 AD-------------------------------------QAVGLLRSMRSAGVRADVVTY 153
Query: 243 NSLMSFETNYKEVSK---IYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLD 299
+L+ + EV K + +M +G++P+VV Y+ L+ Y K+ R E+ VF EM +
Sbjct: 154 GTLIRGLCDAAEVDKAVELMGEMCESGIEPNVVVYSSLLQGYCKSGRWEDVGKVFVEMSE 213
Query: 300 AGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEG 359
G+ P Y L+D+ G +A V M R P++ +Y +++ ++
Sbjct: 214 KGIEPDVVMYTGLIDSLCKVGKAKKAHGVMDMMVRRGLEPNVVTYNVLINCMCKEGSVKE 273
Query: 360 AEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMR--VNGIKPNQTIFTTI 417
A +++ + G P+V+TY TLIKG + V +++ M + ++M N +KPN F ++
Sbjct: 274 AIGVLKKMSEKGVAPDVVTYNTLIKGLSDVLEMDEAMWLLEEMVRGKNIVKPNVVTFNSV 333
Query: 418 MDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNN 477
+ A ME G + N+L+ + +A EL+
Sbjct: 334 IQGLCDIGRMRQAFQVRAMMEETGCMVNLVTYNLLIGGLLRVHKVRKAMELMDEMTSLGL 393
Query: 478 EP 479
EP
Sbjct: 394 EP 395
>gi|449432854|ref|XP_004134213.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g06920-like [Cucumis sativus]
Length = 904
Score = 152 bits (383), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 97/374 (25%), Positives = 182/374 (48%), Gaps = 7/374 (1%)
Query: 99 FLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQ 158
F LI + ++G + A +L M P VV + ++ +G+ G+ A F M+
Sbjct: 238 FTTLIRVFAREGRVDAALSLLDEMKSNSLEPDVVLYNVCIDCFGKAGKVDMAWKFFHEMK 297
Query: 159 SSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAG 218
++G +TY ++ + +A++ EA E+F + D+ K P ++ MI Y AG
Sbjct: 298 ANGLVLDDVTYTSMIGVLCKADRLNEAVELFEHM-DQNKQV--PCAYAYNTMIMGYGMAG 354
Query: 219 GYEKARKLFALMAERGVQQSTVTYNSLMSF---ETNYKEVSKIYDQMQRAGLQPDVVSYA 275
+E A L +G S V+YN ++S + E K +++M++ + P++ +Y
Sbjct: 355 KFEDAYSLLERQRRKGCIPSVVSYNCILSCLGRKGQVDEALKKFEEMKKDAI-PNLSTYN 413
Query: 276 LLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRD 335
++I+ KA + E AL V + M DAG+ P NI++D + +D A ++F+ +
Sbjct: 414 IMIDMLCKAGKLETALVVRDAMKDAGLFPNVITVNIMVDRLCKAQRLDDACSIFEGLDHK 473
Query: 336 RCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKM 395
C PD +Y +++ ++ A K + ++ +PN + Y +LI+ + K E
Sbjct: 474 TCRPDAVTYCSLIEGLGRHGRVDEAYKLYEQMLDANQIPNAVVYTSLIRNFFKCGRKEDG 533
Query: 396 MEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSL 455
+IY++M G P+ + T MD K + + ++E+++ GF PD ++ IL+
Sbjct: 534 HKIYNEMLRLGCSPDLLLLNTYMDCVFKAGEIEKGRALFQEIKNLGFIPDARSYTILIHG 593
Query: 456 AKTADERNEANELL 469
A +EA EL
Sbjct: 594 LVKAGFAHEAYELF 607
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 101/401 (25%), Positives = 183/401 (45%), Gaps = 40/401 (9%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGR------------------ 143
+I YG G F A +L +KG PSVVS+ ++ GR
Sbjct: 346 MIMGYGMAGKFEDAYSLLERQRRKGCIPSVVSYNCILSCLGRKGQVDEALKKFEEMKKDA 405
Query: 144 ----------------GGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEE 187
G+ + A + M+ +G P+ +T I++ +A + +A
Sbjct: 406 IPNLSTYNIMIDMLCKAGKLETALVVRDAMKDAGLFPNVITVNIMVDRLCKAQRLDDACS 465
Query: 188 VFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMS 247
+F L + +PD + +I + G ++A KL+ M + + V Y SL+
Sbjct: 466 IFEGL---DHKTCRPDAVTYCSLIEGLGRHGRVDEAYKLYEQMLDANQIPNAVVYTSLIR 522
Query: 248 --FETNYKE-VSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRP 304
F+ KE KIY++M R G PD++ ++ KA E+ A+F+E+ + G P
Sbjct: 523 NFFKCGRKEDGHKIYNEMLRLGCSPDLLLLNTYMDCVFKAGEIEKGRALFQEIKNLGFIP 582
Query: 305 THKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFF 364
++Y IL+ +G +A +F M+ C D +Y T++ + + + A +
Sbjct: 583 DARSYTILIHGLVKAGFAHEAYELFYTMKEQGCVLDTRAYNTVIDGFCKSGKVNKAYQLL 642
Query: 365 RRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKN 424
+K G P V+TYG++I G AK++ L++ ++++ + GI+ N I+++++D +GK
Sbjct: 643 EEMKTKGHEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKGIELNVVIYSSLIDGFGKV 702
Query: 425 KDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEA 465
D A + +E+ G P+ N LL A+E +EA
Sbjct: 703 GRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEISEA 743
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 92/362 (25%), Positives = 177/362 (48%), Gaps = 6/362 (1%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + + LI + K G K+ + M + G +P ++ M+ + G + A+F
Sbjct: 513 NAVVYTSLIRNFFKCGRKEDGHKIYNEMLRLGCSPDLLLLNTYMDCVFKAGEIEKGRALF 572
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
+ +++ G P A +Y I++ V+A EA E+F T+ E+ L D + ++ +I +
Sbjct: 573 QEIKNLGFIPDARSYTILIHGLVKAGFAHEAYELFYTM-KEQGCVL--DTRAYNTVIDGF 629
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSL---MSFETNYKEVSKIYDQMQRAGLQPDV 271
K+G KA +L M +G + + VTY S+ ++ E ++++ + G++ +V
Sbjct: 630 CKSGKVNKAYQLLEEMKTKGHEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKGIELNV 689
Query: 272 VSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKC 331
V Y+ LI+ +GK R +EA + EE++ G+ P +N LLDA + + +A F+
Sbjct: 690 VIYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEISEALVCFQS 749
Query: 332 MRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNN 391
M+ +C+P+ +Y+ ++ A F++ +++ GF PNV TY T+I G AK N
Sbjct: 750 MKDLKCTPNYITYSILIHGLCKIRKFNKAFVFWQEMQKQGFKPNVFTYTTMISGLAKAGN 809
Query: 392 LEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNI 451
+ + +++K + G + I+ I++ A ++E G K +
Sbjct: 810 IVEADTLFEKFKEKGGVADSAIYNAIIEGLSNANRASDAYRLFEEARLKGCSIYTKTCVV 869
Query: 452 LL 453
LL
Sbjct: 870 LL 871
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 93/376 (24%), Positives = 174/376 (46%), Gaps = 6/376 (1%)
Query: 97 MDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRR 156
+ + LI G+ G ++A K+ M P+ V +T+L+ + + GR ++ I+
Sbjct: 480 VTYCSLIEGLGRHGRVDEAYKLYEQMLDANQIPNAVVYTSLIRNFFKCGRKEDGHKIYNE 539
Query: 157 MQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKK 216
M G P L + +A + ++ +F + + PD + + ++I+ K
Sbjct: 540 MLRLGCSPDLLLLNTYMDCVFKAGEIEKGRALFQEI---KNLGFIPDARSYTILIHGLVK 596
Query: 217 AGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSKIY---DQMQRAGLQPDVVS 273
AG +A +LF M E+G T YN+++ +V+K Y ++M+ G +P VV+
Sbjct: 597 AGFAHEAYELFYTMKEQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTKGHEPTVVT 656
Query: 274 YALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMR 333
Y +I+ K R +EA +FEE G+ Y+ L+D F G +D+A + + +
Sbjct: 657 YGSVIDGLAKIDRLDEAYMLFEEAKSKGIELNVVIYSSLIDGFGKVGRIDEAYLIMEELM 716
Query: 334 RDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLE 393
+ +P++ ++ +L A V A ++ A F+ +K PN ITY LI G K+
Sbjct: 717 QKGLTPNVYTWNCLLDALVKAEEISEALVCFQSMKDLKCTPNYITYSILIHGLCKIRKFN 776
Query: 394 KMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILL 453
K + +M+ G KPN +TT++ K + A +++ + G D N ++
Sbjct: 777 KAFVFWQEMQKQGFKPNVFTYTTMISGLAKAGNIVEADTLFEKFKEKGGVADSAIYNAII 836
Query: 454 SLAKTADERNEANELL 469
A+ ++A L
Sbjct: 837 EGLSNANRASDAYRLF 852
Score = 138 bits (348), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 90/368 (24%), Positives = 164/368 (44%), Gaps = 17/368 (4%)
Query: 90 SWWDFNEM----------DFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALME 139
+W F+EM + +I K N+A ++ M++ P ++ ++
Sbjct: 289 AWKFFHEMKANGLVLDDVTYTSMIGVLCKADRLNEAVELFEHMDQNKQVPCAYAYNTMIM 348
Query: 140 AYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSP 199
YG G++++A ++ R + G PS ++Y IL + EA + F +E K
Sbjct: 349 GYGMAGKFEDAYSLLERQRRKGCIPSVVSYNCILSCLGRKGQVDEALKKF----EEMKKD 404
Query: 200 LKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSL---MSFETNYKEVS 256
P+ +++MI M KAG E A + M + G+ + +T N + + +
Sbjct: 405 AIPNLSTYNIMIDMLCKAGKLETALVVRDAMKDAGLFPNVITVNIMVDRLCKAQRLDDAC 464
Query: 257 KIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAF 316
I++ + +PD V+Y LI G+ R +EA ++E+MLDA P Y L+ F
Sbjct: 465 SIFEGLDHKTCRPDAVTYCSLIEGLGRHGRVDEAYKLYEQMLDANQIPNAVVYTSLIRNF 524
Query: 317 AISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNV 376
G + ++ M R CSPD+ T + A ++E F+ +K GF+P+
Sbjct: 525 FKCGRKEDGHKIYNEMLRLGCSPDLLLLNTYMDCVFKAGEIEKGRALFQEIKNLGFIPDA 584
Query: 377 ITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKE 436
+Y LI G K + E++ M+ G + + T++D + K+ + A +E
Sbjct: 585 RSYTILIHGLVKAGFAHEAYELFYTMKEQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEE 644
Query: 437 MESCGFPP 444
M++ G P
Sbjct: 645 MKTKGHEP 652
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 77/357 (21%), Positives = 140/357 (39%), Gaps = 36/357 (10%)
Query: 133 SHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTL 192
++ +L+ R ++ E I M +G PS T I+ F+++ K +EA T+
Sbjct: 132 AYNSLLMVMARTRKFNCLEQILEEMSIAGFGPSNNTCIEIVLSFIKSRKLREAFTFIQTM 191
Query: 193 LDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNY 252
K +P + +I G +R ++
Sbjct: 192 ---RKLKFRPAFSAYTNLI------GALSTSRDSDCMLT--------------------- 221
Query: 253 KEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNIL 312
++ QMQ G +V + LI + + R + AL++ +EM + P YN+
Sbjct: 222 -----LFQQMQELGYAVNVHLFTTLIRVFAREGRVDAALSLLDEMKSNSLEPDVVLYNVC 276
Query: 313 LDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGF 372
+D F +G VD A F M+ + D +YT+M+ A + A + F + Q+
Sbjct: 277 IDCFGKAGKVDMAWKFFHEMKANGLVLDDVTYTSMIGVLCKADRLNEAVELFEHMDQNKQ 336
Query: 373 VPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVV 432
VP Y T+I GY E + ++ R G P+ + I+ G+ D A+
Sbjct: 337 VPCAYAYNTMIMGYGMAGKFEDAYSLLERQRRKGCIPSVVSYNCILSCLGRKGQVDEALK 396
Query: 433 WYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGINGLSISVD 489
++EM+ P+ NI++ + A + A + P + ++I VD
Sbjct: 397 KFEEMKKDAI-PNLSTYNIMIDMLCKAGKLETALVVRDAMKDAGLFPNVITVNIMVD 452
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/270 (22%), Positives = 112/270 (41%), Gaps = 41/270 (15%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSH--------------------------- 134
+I + K G NKA ++L M KG+ P+VV++
Sbjct: 625 VIDGFCKSGKVNKAYQLLEEMKTKGHEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKG 684
Query: 135 --------TALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAE 186
++L++ +G+ GR A I + G P+ T+ +L V+A + EA
Sbjct: 685 IELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEISEAL 744
Query: 187 EVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLM 246
F ++ D + +P + + ++I+ K + KA + M ++G + + TY +++
Sbjct: 745 VCFQSMKDLKCTP---NYITYSILIHGLCKIRKFNKAFVFWQEMQKQGFKPNVFTYTTMI 801
Query: 247 SF---ETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVR 303
S N E ++++ + G D Y +I A R +A +FEE G
Sbjct: 802 SGLAKAGNIVEADTLFEKFKEKGGVADSAIYNAIIEGLSNANRASDAYRLFEEARLKGCS 861
Query: 304 PTHKAYNILLDAFAISGMVDQARTVFKCMR 333
K +LLD+ + ++QA V +R
Sbjct: 862 IYTKTCVVLLDSLHKAECIEQAAIVGAVLR 891
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/219 (24%), Positives = 100/219 (45%), Gaps = 7/219 (3%)
Query: 93 DFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEA 152
+ N + + LI +GK G ++A ++ + +KG P+V + L++A + A
Sbjct: 686 ELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEISEALV 745
Query: 153 IFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIY 212
F+ M+ P+ +TY I++ + KF +A F+ + +K KP+ + MI
Sbjct: 746 CFQSMKDLKCTPNYITYSILIHGLCKIRKFNKA---FVFWQEMQKQGFKPNVFTYTTMIS 802
Query: 213 MYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSKIYDQMQRAGLQPDVV 272
KAG +A LF E+G + YN+++ +N S Y + A L+ +
Sbjct: 803 GLAKAGNIVEADTLFEKFKEKGGVADSAIYNAIIEGLSNANRASDAYRLFEEARLKGCSI 862
Query: 273 ---SYALLINAYGKARREEEALAVFEEMLDAGVRPTHKA 308
+ +L+++ KA E+A A+ +L + H A
Sbjct: 863 YTKTCVVLLDSLHKAECIEQA-AIVGAVLRETAKAQHAA 900
>gi|302770561|ref|XP_002968699.1| hypothetical protein SELMODRAFT_61973 [Selaginella moellendorffii]
gi|300163204|gb|EFJ29815.1| hypothetical protein SELMODRAFT_61973 [Selaginella moellendorffii]
Length = 544
Score = 152 bits (383), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 100/378 (26%), Positives = 178/378 (47%), Gaps = 41/378 (10%)
Query: 101 MLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSS 160
+L++A G +A + S M +P ++++ LM+ Y + G+ A+++ + + +
Sbjct: 181 ILLSALSDSGRMAEAHALFSAMT---CSPDIMTYNVLMDGYCKIGQTYEAQSLMKEILKA 237
Query: 161 GPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGY 220
G P+ TY II+ + + +K +EA EVFM +++ S P+ F+ +I + KAG
Sbjct: 238 GYEPNVFTYSIIINCYCKLDKVEEAWEVFMKMIE---SNCVPNAVTFNTLIAGFCKAGML 294
Query: 221 EKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSKIYDQMQRAGLQPDVVSYALLINA 280
E A KLFA +M++ G + +V+Y LI++
Sbjct: 295 EDAIKLFA--------------------------------EMEKIGCKATIVTYNTLIDS 322
Query: 281 YGKARREE-EALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSP 339
K R A+ +F ++ AG+ PT YN L+ F + + +A F M +C+P
Sbjct: 323 LCKKRGGVYTAVDLFNKLEGAGLTPTIVTYNSLIQGFCDARRLSEAMQYFDEME-GKCAP 381
Query: 340 DICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIY 399
++ +Y+ ++ M+ A K +K G+ P V+TYG LI G+ K L+ + +
Sbjct: 382 NVITYSILIDGLCKVRRMKEAAKTLEDMKAHGYTPTVVTYGGLINGFCKCGELKSALLFF 441
Query: 400 DKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTA 459
+KM++ G PN IF T++D K + + + M + G PD N L+S +A
Sbjct: 442 EKMKLAGCAPNTVIFNTLIDGLCKAERANDGLRLLCHMHAEGCKPDVITYNCLISGLCSA 501
Query: 460 DERNEANELL-GNFNHPN 476
+ +A L G PN
Sbjct: 502 NRVEDAQRLFDGMACAPN 519
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 98/426 (23%), Positives = 194/426 (45%), Gaps = 56/426 (13%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
L+ + G + A K+ M + P+ SH L+ + GR ++A A + M+ S
Sbjct: 73 LLLGLCEIGQMSSALKLFREMQAGPFLPTSASHNILLRGFFMAGRVRDALAHLQDMRKSS 132
Query: 162 PRPSALTYQIILKLFV----EANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKA 217
+ TY ++LK AN+ ++A E F + + S ++PD + +H+++ +
Sbjct: 133 SSVATGTYNLVLKGLCWENKSANRLEQAMEFFKEM---KASGVEPDLESYHILLSALSDS 189
Query: 218 GGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSKIYD------QMQRAGLQPDV 271
G +A LF+ M +TYN LM Y ++ + Y+ ++ +AG +P+V
Sbjct: 190 GRMAEAHALFSAMT---CSPDIMTYNVLMD---GYCKIGQTYEAQSLMKEILKAGYEPNV 243
Query: 272 VSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKC 331
+Y+++IN Y K + EEA VF +M+++ P +N L+ F +GM++ A +F
Sbjct: 244 FTYSIIINCYCKLDKVEEAWEVFMKMIESNCVPNAVTFNTLIAGFCKAGMLEDAIKLFAE 303
Query: 332 MRRDRC------------------------------------SPDICSYTTMLSAYVNAS 355
M + C +P I +Y +++ + +A
Sbjct: 304 MEKIGCKATIVTYNTLIDSLCKKRGGVYTAVDLFNKLEGAGLTPTIVTYNSLIQGFCDAR 363
Query: 356 DMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFT 415
+ A ++F + + PNVITY LI G KV +++ + + M+ +G P +
Sbjct: 364 RLSEAMQYFDEM-EGKCAPNVITYSILIDGLCKVRRMKEAAKTLEDMKAHGYTPTVVTYG 422
Query: 416 TIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHP 475
+++ + K + SA++++++M+ G P+ N L+ A+ N+ LL + +
Sbjct: 423 GLINGFCKCGELKSALLFFEKMKLAGCAPNTVIFNTLIDGLCKAERANDGLRLLCHMHAE 482
Query: 476 NNEPGI 481
+P +
Sbjct: 483 GCKPDV 488
Score = 125 bits (315), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 88/382 (23%), Positives = 180/382 (47%), Gaps = 13/382 (3%)
Query: 62 LVLGTLVRLKQLKKWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSF 121
L+ G + K + + EVL L + +N +LI + K G ++A V S
Sbjct: 3 LLSGLVSARKHDQALRLFKEVLAGLFAPNAHTYN-----VLIRGFCKGGQMHQAVSVFSD 57
Query: 122 MNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANK 181
M G P+ + L+ G+ +A +FR MQ+ P++ ++ I+L+ F A +
Sbjct: 58 MKSSGLLPNASTMNTLLLGLCEIGQMSSALKLFREMQAGPFLPTSASHNILLRGFFMAGR 117
Query: 182 FKEAEEVFMTLLDEEKSPLKPDQKMFHMMI----YMYKKAGGYEKARKLFALMAERGVQQ 237
++A L D KS +++++ + K A E+A + F M GV+
Sbjct: 118 VRDA---LAHLQDMRKSSSSVATGTYNLVLKGLCWENKSANRLEQAMEFFKEMKASGVEP 174
Query: 238 STVTYNSLMSFETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEM 297
+Y+ L+S ++ +++ + PD+++Y +L++ Y K + EA ++ +E+
Sbjct: 175 DLESYHILLSALSDSGRMAEAHALFSAMTCSPDIMTYNVLMDGYCKIGQTYEAQSLMKEI 234
Query: 298 LDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDM 357
L AG P Y+I+++ + V++A VF M C P+ ++ T+++ + A +
Sbjct: 235 LKAGYEPNVFTYSIIINCYCKLDKVEEAWEVFMKMIESNCVPNAVTFNTLIAGFCKAGML 294
Query: 358 EGAEKFFRRLKQDGFVPNVITYGTLIKGYAKV-NNLEKMMEIYDKMRVNGIKPNQTIFTT 416
E A K F +++ G ++TY TLI K + +++++K+ G+ P + +
Sbjct: 295 EDAIKLFAEMEKIGCKATIVTYNTLIDSLCKKRGGVYTAVDLFNKLEGAGLTPTIVTYNS 354
Query: 417 IMDAYGKNKDFDSAVVWYKEME 438
++ + + A+ ++ EME
Sbjct: 355 LIQGFCDARRLSEAMQYFDEME 376
Score = 125 bits (313), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 80/335 (23%), Positives = 161/335 (48%), Gaps = 14/335 (4%)
Query: 127 YAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAE 186
+AP+ ++ L+ + +GG+ A ++F M+SSG P+A T +L E + A
Sbjct: 28 FAPNAHTYNVLIRGFCKGGQMHQAVSVFSDMKSSGLLPNASTMNTLLLGLCEIGQMSSAL 87
Query: 187 EVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLM 246
++F + + P P ++++ + AG A M + +T TYN ++
Sbjct: 88 KLFREM---QAGPFLPTSASHNILLRGFFMAGRVRDALAHLQDMRKSSSSVATGTYNLVL 144
Query: 247 -------SFETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLD 299
++ + + +M+ +G++PD+ SY +L++A + R EA A+F M
Sbjct: 145 KGLCWENKSANRLEQAMEFFKEMKASGVEPDLESYHILLSALSDSGRMAEAHALFSAMT- 203
Query: 300 AGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEG 359
P YN+L+D + G +A+++ K + + P++ +Y+ +++ Y +E
Sbjct: 204 --CSPDIMTYNVLMDGYCKIGQTYEAQSLMKEILKAGYEPNVFTYSIIINCYCKLDKVEE 261
Query: 360 AEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMD 419
A + F ++ + VPN +T+ TLI G+ K LE ++++ +M G K + T++D
Sbjct: 262 AWEVFMKMIESNCVPNAVTFNTLIAGFCKAGMLEDAIKLFAEMEKIGCKATIVTYNTLID 321
Query: 420 AYGKNK-DFDSAVVWYKEMESCGFPPDQKAKNILL 453
+ K + +AV + ++E G P N L+
Sbjct: 322 SLCKKRGGVYTAVDLFNKLEGAGLTPTIVTYNSLI 356
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 83/330 (25%), Positives = 151/330 (45%), Gaps = 14/330 (4%)
Query: 136 ALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDE 195
AL+ ++ A +F+ + + P+A TY ++++ F + + +A VF D
Sbjct: 2 ALLSGLVSARKHDQALRLFKEVLAGLFAPNAHTYNVLIRGFCKGGQMHQAVSVFS---DM 58
Query: 196 EKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMS---FETNY 252
+ S L P+ + ++ + G A KLF M ++ ++N L+
Sbjct: 59 KSSGLLPNASTMNTLLLGLCEIGQMSSALKLFREMQAGPFLPTSASHNILLRGFFMAGRV 118
Query: 253 KEVSKIYDQMQRAGLQPDVVSYALLINAYG----KARREEEALAVFEEMLDAGVRPTHKA 308
++ M+++ +Y L++ A R E+A+ F+EM +GV P ++
Sbjct: 119 RDALAHLQDMRKSSSSVATGTYNLVLKGLCWENKSANRLEQAMEFFKEMKASGVEPDLES 178
Query: 309 YNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLK 368
Y+ILL A + SG + +A +F M CSPDI +Y ++ Y A+ + +
Sbjct: 179 YHILLSALSDSGRMAEAHALFSAM---TCSPDIMTYNVLMDGYCKIGQTYEAQSLMKEIL 235
Query: 369 QDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFD 428
+ G+ PNV TY +I Y K++ +E+ E++ KM + PN F T++ + K +
Sbjct: 236 KAGYEPNVFTYSIIINCYCKLDKVEEAWEVFMKMIESNCVPNAVTFNTLIAGFCKAGMLE 295
Query: 429 SAVVWYKEMESCGFPPDQKAKNILL-SLAK 457
A+ + EME G N L+ SL K
Sbjct: 296 DAIKLFAEMEKIGCKATIVTYNTLIDSLCK 325
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 99/217 (45%), Gaps = 7/217 (3%)
Query: 277 LINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDR 336
L++ AR+ ++AL +F+E+L P YN+L+ F G + QA +VF M+
Sbjct: 3 LLSGLVSARKHDQALRLFKEVLAGLFAPNAHTYNVLIRGFCKGGQMHQAVSVFSDMKSSG 62
Query: 337 CSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMM 396
P+ + T+L M A K FR ++ F+P ++ L++G+ + +
Sbjct: 63 LLPNASTMNTLLLGLCEIGQMSSALKLFREMQAGPFLPTSASHNILLRGFFMAGRVRDAL 122
Query: 397 EIYDKMRVNGIKPNQTIFTTIMDAYG-KNKD---FDSAVVWYKEMESCGFPPDQKAKNIL 452
MR + + ++ +NK + A+ ++KEM++ G PD ++ +IL
Sbjct: 123 AHLQDMRKSSSSVATGTYNLVLKGLCWENKSANRLEQAMEFFKEMKASGVEPDLESYHIL 182
Query: 453 LSLAKTADERNEANELLGNFNHPNNEPGINGLSISVD 489
LS + EA+ L F+ P I ++ +D
Sbjct: 183 LSALSDSGRMAEAHAL---FSAMTCSPDIMTYNVLMD 216
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/247 (20%), Positives = 102/247 (41%), Gaps = 7/247 (2%)
Query: 257 KIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAF 316
+++ ++ P+ +Y +LI + K + +A++VF +M +G+ P N LL
Sbjct: 18 RLFKEVLAGLFAPNAHTYNVLIRGFCKGGQMHQAVSVFSDMKSSGLLPNASTMNTLLLGL 77
Query: 317 AISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNV 376
G + A +F+ M+ P S+ +L + A + A + +++
Sbjct: 78 CEIGQMSSALKLFREMQAGPFLPTSASHNILLRGFFMAGRVRDALAHLQDMRKSSSSVAT 137
Query: 377 ITYGTLIKGYA----KVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVV 432
TY ++KG N LE+ ME + +M+ +G++P+ + ++ A + A
Sbjct: 138 GTYNLVLKGLCWENKSANRLEQAMEFFKEMKASGVEPDLESYHILLSALSDSGRMAEAHA 197
Query: 433 WYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGINGLSISVDEED 492
+ M PD N+L+ + EA L+ EP + SI ++
Sbjct: 198 LFSAMTC---SPDIMTYNVLMDGYCKIGQTYEAQSLMKEILKAGYEPNVFTYSIIINCYC 254
Query: 493 DDDDDDE 499
D +E
Sbjct: 255 KLDKVEE 261
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 68/152 (44%), Gaps = 6/152 (3%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + + +LI K +A K L M GY P+VV++ L+ + + G K+A F
Sbjct: 382 NVITYSILIDGLCKVRRMKEAAKTLEDMKAHGYTPTVVTYGGLINGFCKCGELKSALLFF 441
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
+M+ +G P+ + + ++ +A + A + L KPD ++ +I
Sbjct: 442 EKMKLAGCAPNTVIFNTLIDGLCKAER---ANDGLRLLCHMHAEGCKPDVITYNCLISGL 498
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSLM 246
A E A++LF MA + T+N L+
Sbjct: 499 CSANRVEDAQRLFDGMA---CAPNVTTFNFLI 527
>gi|168052517|ref|XP_001778696.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162669911|gb|EDQ56489.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 799
Score = 152 bits (383), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 93/345 (26%), Positives = 180/345 (52%), Gaps = 9/345 (2%)
Query: 97 MDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRR 156
+ F L+ AY QG + +A +V+ + K + P VVS+++L+ A+G+ G + A+ +F
Sbjct: 301 VTFNTLLGAYASQGMYTEALQVVGLLVKAKFEPDVVSYSSLLNAFGKAGYPEKAQEVFDL 360
Query: 157 MQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKK 216
M+ +P+ +T+ ++ + A K++ A E+ L D ++ ++P+ + +
Sbjct: 361 MKQRSRKPNLVTFNGLMDAYASAGKYERAREL---LHDMAEARIEPNVVTICSLFAACAR 417
Query: 217 AGGYEKARKLFALMAERGVQQSTVTYNSLMSFET---NYKEVSKIYDQMQRAGLQPDVVS 273
A EK R +F R + + +N+ ++ + E + + M+ L+P+ V+
Sbjct: 418 ARCPEKVRDVFHEAKVRQIALNVPAFNAAITAYIEAGQFDEAKALLEVMEEQNLRPNGVT 477
Query: 274 YALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMR 333
+ LLINA G EA ++++M+D G+ T + + L++AFA GM ++ART+F MR
Sbjct: 478 FLLLINAAGSLGDYREARTLYDKMVDLGIPLTVEPCSALINAFAKHGMYNEARTIFDDMR 537
Query: 334 RDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLE 393
+ C ++ +YT+++ AY D + A + G P+ I +GTL K N E
Sbjct: 538 KAGCKANVVTYTSLMIAYRMYDDAQLA---CEEMVAAGITPDSIAFGTLFVALNKANRSE 594
Query: 394 KMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEME 438
K+++I R GI + +T + A + KD+++A+ Y+ M+
Sbjct: 595 KVLQIEKSSRARGILFDDVAYTETLLACSRLKDWETALFLYEGMK 639
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 93/371 (25%), Positives = 176/371 (47%), Gaps = 5/371 (1%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
LI A G G + KA ++ M G P ++++ ++ A+ GG+ ++A A + + S
Sbjct: 165 LINACGSSGQWFKALEICKRMTDNGVGPDLMTYNIILSAFKSGGQPRHAVAYYDHLISKK 224
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
++ IIL + +F++A +F + + + +PD F+ ++++Y G
Sbjct: 225 VPLDRYSHNIILNCLTKLGRFEDAINLFKEM--RKMNGCEPDVVTFNALLHVYALCGQIT 282
Query: 222 KARKLFALMAERGVQQSTVTYNSLM---SFETNYKEVSKIYDQMQRAGLQPDVVSYALLI 278
KA++ F +M G+ + VT+N+L+ + + Y E ++ + +A +PDVVSY+ L+
Sbjct: 283 KAQETFDMMIGEGMAPTIVTFNTLLGAYASQGMYTEALQVVGLLVKAKFEPDVVSYSSLL 342
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCS 338
NA+GKA E+A VF+ M +P +N L+DA+A +G ++AR + M R
Sbjct: 343 NAFGKAGYPEKAQEVFDLMKQRSRKPNLVTFNGLMDAYASAGKYERARELLHDMAEARIE 402
Query: 339 PDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEI 398
P++ + ++ +A A E F K NV + I Y + ++ +
Sbjct: 403 PNVVTICSLFAACARARCPEKVRDVFHEAKVRQIALNVPAFNAAITAYIEAGQFDEAKAL 462
Query: 399 YDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKT 458
+ M ++PN F +++A G D+ A Y +M G P + + L++
Sbjct: 463 LEVMEEQNLRPNGVTFLLLINAAGSLGDYREARTLYDKMVDLGIPLTVEPCSALINAFAK 522
Query: 459 ADERNEANELL 469
NEA +
Sbjct: 523 HGMYNEARTIF 533
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 99/393 (25%), Positives = 182/393 (46%), Gaps = 16/393 (4%)
Query: 59 PKDLVLGTLVRLKQLKKWNVVSEVLE-WLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEK 117
P+++V R+ L W + VL WL FN +F LI+ + G + +
Sbjct: 22 PREVV----SRVLALNHWEDIDGVLNCWLG-----RFNRKNFPALISEITRTGALEHSLR 72
Query: 118 VLSFM-NKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLF 176
V ++M N+K Y + ++ + R R A +F M+ +P TY ++ +
Sbjct: 73 VFNWMKNQKCYRARTDIYNCMIWLHARHQRADQARGLFYEMKVWRCKPDVETYNALMNVH 132
Query: 177 VEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQ 236
A +++ A ++F +L K P+ P + ++ +I +G + KA ++ M + GV
Sbjct: 133 GRAGQWRWALQIFDDMLQAPK-PIAPSRSSYNNLINACGSSGQWFKALEICKRMTDNGVG 191
Query: 237 QSTVTYNSLMS-FET--NYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAV 293
+TYN ++S F++ + YD + + D S+ +++N K R E+A+ +
Sbjct: 192 PDLMTYNIILSAFKSGGQPRHAVAYYDHLISKKVPLDRYSHNIILNCLTKLGRFEDAINL 251
Query: 294 FEEMLDA-GVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYV 352
F+EM G P +N LL +A+ G + +A+ F M + +P I ++ T+L AY
Sbjct: 252 FKEMRKMNGCEPDVVTFNALLHVYALCGQITKAQETFDMMIGEGMAPTIVTFNTLLGAYA 311
Query: 353 NASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQT 412
+ A + L + F P+V++Y +L+ + K EK E++D M+ KPN
Sbjct: 312 SQGMYTEALQVVGLLVKAKFEPDVVSYSSLLNAFGKAGYPEKAQEVFDLMKQRSRKPNLV 371
Query: 413 IFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPD 445
F +MDAY ++ A +M P+
Sbjct: 372 TFNGLMDAYASAGKYERARELLHDMAEARIEPN 404
Score = 105 bits (261), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 94/415 (22%), Positives = 171/415 (41%), Gaps = 74/415 (17%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
L+ A+GK G KA++V M ++ P++V+ LM+AY G+Y+ A + M +
Sbjct: 341 LLNAFGKAGYPEKAQEVFDLMKQRSRKPNLVTFNGLMDAYASAGKYERARELLHDMAEAR 400
Query: 162 PRPSALTY--------------------------QIILKL---------FVEANKFKEAE 186
P+ +T QI L + ++EA +F EA+
Sbjct: 401 IEPNVVTICSLFAACARARCPEKVRDVFHEAKVRQIALNVPAFNAAITAYIEAGQFDEAK 460
Query: 187 EVFMTLLDEEKSPLKPDQKMFHMMIYM--------------------------------- 213
+ + E+ L+P+ F ++I
Sbjct: 461 ALLEVM---EEQNLRPNGVTFLLLINAAGSLGDYREARTLYDKMVDLGIPLTVEPCSALI 517
Query: 214 --YKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSKIYDQMQRAGLQPDV 271
+ K G Y +AR +F M + G + + VTY SLM Y + ++M AG+ PD
Sbjct: 518 NAFAKHGMYNEARTIFDDMRKAGCKANVVTYTSLMIAYRMYDDAQLACEEMVAAGITPDS 577
Query: 272 VSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKC 331
+++ L A KA R E+ L + + G+ AY L A + + A +++
Sbjct: 578 IAFGTLFVALNKANRSEKVLQIEKSSRARGILFDDVAYTETLLACSRLKDWETALFLYEG 637
Query: 332 MRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQD-GFVPNVITYGTLIKGYAKVN 390
M++ R +LSA + ++ K F L+Q GFVP + Y LI Y++
Sbjct: 638 MKKRRLRLTNTMVINLLSAVGRSGKLDRLHKVFLELQQQIGFVPTLQMYNILIDSYSRGL 697
Query: 391 NLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPD 445
K +E+ ++ + ++PN + I+ + + +++ + Y E+ + G PD
Sbjct: 698 KWRKCLEVLGCIKKDILEPNWKTYEPILSCLSQLELWETYLEIYGEVLAQGMEPD 752
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 39/190 (20%), Positives = 85/190 (44%), Gaps = 5/190 (2%)
Query: 35 MNQIEEVGSAVAVLRSERTRGQPLPKDLVLGTLVRLKQLKKWNVVSEVLEWLRIQSWWDF 94
+N+ + + +S R RG TL+ +LK W + E ++ +
Sbjct: 587 LNKANRSEKVLQIEKSSRARGILFDDVAYTETLLACSRLKDWETALFLYEGMKKRRLRLT 646
Query: 95 NEMDFLMLITAYGKQGDFNKAEKV-LSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAI 153
N M + L++A G+ G ++ KV L + G+ P++ + L+++Y RG +++ +
Sbjct: 647 NTM-VINLLSAVGRSGKLDRLHKVFLELQQQIGFVPTLQMYNILIDSYSRGLKWRKCLEV 705
Query: 154 FRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYM 213
++ P+ TY+ IL + ++ E++ +L + ++PD + + +
Sbjct: 706 LGCIKKDILEPNWKTYEPILSCLSQLELWETYLEIYGEVLAQ---GMEPDYNILKISVTA 762
Query: 214 YKKAGGYEKA 223
Y G E+A
Sbjct: 763 YTSLGMEEEA 772
>gi|255661190|gb|ACU25764.1| pentatricopeptide repeat-containing protein [Dipyrena glaberrima]
Length = 426
Score = 152 bits (383), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 99/377 (26%), Positives = 186/377 (49%), Gaps = 39/377 (10%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
LI K D++KA + S + + G++P +V++ A++ +G+ ++ A ++ M+++G
Sbjct: 50 LIELSRKLCDYSKAISIFSRLKRSGFSPDLVAYNAMINVFGKAKLFREARSLISEMRTAG 109
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
P+ ++Y +L ++VE KF EA VF + E K L D ++MI +Y + G +
Sbjct: 110 VMPNTVSYSTLLTMYVENKKFLEALTVFAE-MREIKCLL--DLTTCNIMIDVYGQLGMAK 166
Query: 222 KARKLFALMAERGVQQSTVTYNSLMSFETN---YKEVSKIYDQMQRAGLQPDVVSYALLI 278
+A KLF M + G++ + V+YN+L+ + + E ++ MQR ++ +VV+Y ++
Sbjct: 167 EADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMM 226
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCS 338
YGK E+A + +EM G+ P Y+ ++ ++ G +D+A +F+ +R
Sbjct: 227 MIYGKTLEHEKANNLIQEMQSRGIEPNSITYSTIISIWSKIGKLDRAAMLFQKLRSSGVE 286
Query: 339 PDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVP------------------------ 374
D Y TM+ AY A + A++ LK+ +P
Sbjct: 287 IDQVLYQTMIVAYERAGLVAHAKRLLHELKRPDNIPRDTAIHILAGSGRIEEATWVFRQA 346
Query: 375 -------NVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDF 427
++ + +I ++K ++E++DKMR G P+ + +++AYGK +F
Sbjct: 347 IDAGEVKDITVFERMIHLFSKYKKYSNVVEVFDKMRGLGYFPDSNVTALVLNAYGKLHEF 406
Query: 428 DSAVVWYKEM--ESCGF 442
D A Y EM E C F
Sbjct: 407 DKANNVYIEMQDEGCLF 423
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 83/319 (26%), Positives = 153/319 (47%), Gaps = 6/319 (1%)
Query: 164 PSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKA 223
P TY ++ F + F +A ++ +++++ P D ++ +I + +K Y KA
Sbjct: 7 PDRYTYSTLITHFGKEGLF-DAALAWLQKMEQDRVP--GDLVLYSNLIELSRKLCDYSKA 63
Query: 224 RKLFALMAERGVQQSTVTYNSLMSF---ETNYKEVSKIYDQMQRAGLQPDVVSYALLINA 280
+F+ + G V YN++++ ++E + +M+ AG+ P+ VSY+ L+
Sbjct: 64 ISIFSRLKRSGFSPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVMPNTVSYSTLLTM 123
Query: 281 YGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPD 340
Y + ++ EAL VF EM + NI++D + GM +A +F MR+ P+
Sbjct: 124 YVENKKFLEALTVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPN 183
Query: 341 ICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYD 400
+ SY T+L Y +A A FR +++ NV+TY +++ Y K EK +
Sbjct: 184 VVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLIQ 243
Query: 401 KMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTAD 460
+M+ GI+PN ++TI+ + K D A + ++++ S G DQ ++ + A
Sbjct: 244 EMQSRGIEPNSITYSTIISIWSKIGKLDRAAMLFQKLRSSGVEIDQVLYQTMIVAYERAG 303
Query: 461 ERNEANELLGNFNHPNNEP 479
A LL P+N P
Sbjct: 304 LVAHAKRLLHELKRPDNIP 322
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 72/301 (23%), Positives = 155/301 (51%), Gaps = 6/301 (1%)
Query: 124 KKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFK 183
++ +P +++ L+ +G+ G + A A ++M+ + Y +++L + +
Sbjct: 2 ERALSPDRYTYSTLITHFGKEGLFDAALAWLQKMEQDRVPGDLVLYSNLIELSRKLCDYS 61
Query: 184 EAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYN 243
+A +F L ++S PD ++ MI ++ KA + +AR L + M GV +TV+Y+
Sbjct: 62 KAISIFSRL---KRSGFSPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVMPNTVSYS 118
Query: 244 SLMSFETNYK---EVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDA 300
+L++ K E ++ +M+ D+ + ++I+ YG+ +EA +F M
Sbjct: 119 TLLTMYVENKKFLEALTVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKM 178
Query: 301 GVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGA 360
G+ P +YN LL + + + +A +F+ M+R ++ +Y +M+ Y + E A
Sbjct: 179 GIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKA 238
Query: 361 EKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDA 420
+ ++ G PN ITY T+I ++K+ L++ ++ K+R +G++ +Q ++ T++ A
Sbjct: 239 NNLIQEMQSRGIEPNSITYSTIISIWSKIGKLDRAAMLFQKLRSSGVEIDQVLYQTMIVA 298
Query: 421 Y 421
Y
Sbjct: 299 Y 299
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/244 (23%), Positives = 117/244 (47%), Gaps = 6/244 (2%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + + L+ YG F +A + M +K +VV++ ++M YG+ ++ A +
Sbjct: 183 NVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLI 242
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
+ MQS G P+++TY I+ ++ + K A +F L S ++ DQ ++ MI Y
Sbjct: 243 QEMQSRGIEPNSITYSTIISIWSKIGKLDRAAMLFQKL---RSSGVEIDQVLYQTMIVAY 299
Query: 215 KKAGGYEKARKLFA-LMAERGVQQSTVTYNSLMSFETNYKEVSKIYDQMQRAGLQPDVVS 273
++AG A++L L + + T + +++ +E + ++ Q AG D+
Sbjct: 300 ERAGLVAHAKRLLHELKRPDNIPRDTAIH--ILAGSGRIEEATWVFRQAIDAGEVKDITV 357
Query: 274 YALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMR 333
+ +I+ + K ++ + VF++M G P ++L+A+ D+A V+ M+
Sbjct: 358 FERMIHLFSKYKKYSNVVEVFDKMRGLGYFPDSNVTALVLNAYGKLHEFDKANNVYIEMQ 417
Query: 334 RDRC 337
+ C
Sbjct: 418 DEGC 421
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 45/181 (24%), Positives = 78/181 (43%)
Query: 301 GVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGA 360
+ P Y+ L+ F G+ D A + M +DR D+ Y+ ++ D A
Sbjct: 4 ALSPDRYTYSTLITHFGKEGLFDAALAWLQKMEQDRVPGDLVLYSNLIELSRKLCDYSKA 63
Query: 361 EKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDA 420
F RLK+ GF P+++ Y +I + K + + +MR G+ PN ++T++
Sbjct: 64 ISIFSRLKRSGFSPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVMPNTVSYSTLLTM 123
Query: 421 YGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPG 480
Y +NK F A+ + EM D NI++ + EA++L EP
Sbjct: 124 YVENKKFLEALTVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPN 183
Query: 481 I 481
+
Sbjct: 184 V 184
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/123 (22%), Positives = 64/123 (52%)
Query: 333 RRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNL 392
R SPD +Y+T+++ + + A + ++++QD +++ Y LI+ K+ +
Sbjct: 1 RERALSPDRYTYSTLITHFGKEGLFDAALAWLQKMEQDRVPGDLVLYSNLIELSRKLCDY 60
Query: 393 EKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNIL 452
K + I+ +++ +G P+ + +++ +GK K F A EM + G P+ + + L
Sbjct: 61 SKAISIFSRLKRSGFSPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVMPNTVSYSTL 120
Query: 453 LSL 455
L++
Sbjct: 121 LTM 123
>gi|224130828|ref|XP_002328386.1| predicted protein [Populus trichocarpa]
gi|222838101|gb|EEE76466.1| predicted protein [Populus trichocarpa]
Length = 617
Score = 152 bits (383), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 97/364 (26%), Positives = 173/364 (47%), Gaps = 6/364 (1%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + + +I + K N+A + LS M +G P VV++ ++ + G+ A +F
Sbjct: 235 NVVTYNTIIDSLCKDRLVNEAVEFLSEMVDRGIPPDVVTYNTILHGFCSLGQLNEATRLF 294
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
+ M P +T+ I++ + EA V T+ ++ +P+ ++ ++ Y
Sbjct: 295 KEMVGRNVMPDTVTFNILVDGLCKEGMVSEARCVSETMTEKGA---EPNAYTYNALMDGY 351
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYK---EVSKIYDQMQRAGLQPDV 271
++A K+ +M +G + +YN L++ K E ++ +M L PD
Sbjct: 352 CLHNQMDEAIKVLGIMIGKGCAPNLSSYNILINGYCKSKRMNEAKRLLSEMSEKNLTPDT 411
Query: 272 VSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKC 331
V+Y+ L+ + R EAL +F+EM +G+ P AY+ILLD F G +D+A + K
Sbjct: 412 VTYSTLMQGLCQVGRPREALNLFKEMCSSGLLPDLMAYSILLDGFCKHGHLDEALKLLKE 471
Query: 332 MRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNN 391
M R P+I YT ++ A +E A++ F +L DG P++ TY +IKG K
Sbjct: 472 MHERRIKPNIILYTILIRGMFIAGKLEVAKELFSKLSADGIRPDIWTYNVMIKGLLKEGL 531
Query: 392 LEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNI 451
++ E + KM +G P+ + I+ + +N+D +A+ EM F D +
Sbjct: 532 SDEAYEFFRKMEDDGFLPDSCSYNVIIQGFLQNQDSSTAIQLIDEMVGKRFSADSSTFQM 591
Query: 452 LLSL 455
LL L
Sbjct: 592 LLDL 595
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 90/384 (23%), Positives = 173/384 (45%), Gaps = 6/384 (1%)
Query: 101 MLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSS 160
+LI + + A V+ M K G P ++ L+ G+ K A +F M S
Sbjct: 136 VLINCLCRLSHVDFAVSVMGKMFKLGIQPDAITFNTLINGLCNEGKIKEAVGLFNEMVWS 195
Query: 161 GPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGY 220
G P+ ++Y ++ + A VF + E++ KP+ ++ +I K
Sbjct: 196 GHEPNVISYNTVINGLCKNGNTIMAVRVFRKM---EQNRGKPNVVTYNTIIDSLCKDRLV 252
Query: 221 EKARKLFALMAERGVQQSTVTYNSLM-SFET--NYKEVSKIYDQMQRAGLQPDVVSYALL 277
+A + + M +RG+ VTYN+++ F + E ++++ +M + PD V++ +L
Sbjct: 253 NEAVEFLSEMVDRGIPPDVVTYNTILHGFCSLGQLNEATRLFKEMVGRNVMPDTVTFNIL 312
Query: 278 INAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRC 337
++ K EA V E M + G P YN L+D + + +D+A V M C
Sbjct: 313 VDGLCKEGMVSEARCVSETMTEKGAEPNAYTYNALMDGYCLHNQMDEAIKVLGIMIGKGC 372
Query: 338 SPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMME 397
+P++ SY +++ Y + M A++ + + P+ +TY TL++G +V + +
Sbjct: 373 APNLSSYNILINGYCKSKRMNEAKRLLSEMSEKNLTPDTVTYSTLMQGLCQVGRPREALN 432
Query: 398 IYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAK 457
++ +M +G+ P+ ++ ++D + K+ D A+ KEM P+ IL+
Sbjct: 433 LFKEMCSSGLLPDLMAYSILLDGFCKHGHLDEALKLLKEMHERRIKPNIILYTILIRGMF 492
Query: 458 TADERNEANELLGNFNHPNNEPGI 481
A + A EL + P I
Sbjct: 493 IAGKLEVAKELFSKLSADGIRPDI 516
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 95/388 (24%), Positives = 174/388 (44%), Gaps = 6/388 (1%)
Query: 97 MDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRR 156
++F + + K+ ++ A + + M+ G +V S L+ R A ++ +
Sbjct: 97 VEFGKFLGSIAKKKQYSSAVSLCNQMDLFGVTHNVYSLNVLINCLCRLSHVDFAVSVMGK 156
Query: 157 MQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKK 216
M G +P A+T+ ++ K KEA +F ++ S +P+ ++ +I K
Sbjct: 157 MFKLGIQPDAITFNTLINGLCNEGKIKEAVGLFNEMV---WSGHEPNVISYNTVINGLCK 213
Query: 217 AGGYEKARKLFALMAERGVQQSTVTYNSL---MSFETNYKEVSKIYDQMQRAGLQPDVVS 273
G A ++F M + + + VTYN++ + + E + +M G+ PDVV+
Sbjct: 214 NGNTIMAVRVFRKMEQNRGKPNVVTYNTIIDSLCKDRLVNEAVEFLSEMVDRGIPPDVVT 273
Query: 274 YALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMR 333
Y +++ + + EA +F+EM+ V P +NIL+D GMV +AR V + M
Sbjct: 274 YNTILHGFCSLGQLNEATRLFKEMVGRNVMPDTVTFNILVDGLCKEGMVSEARCVSETMT 333
Query: 334 RDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLE 393
P+ +Y ++ Y + M+ A K + G PN+ +Y LI GY K +
Sbjct: 334 EKGAEPNAYTYNALMDGYCLHNQMDEAIKVLGIMIGKGCAPNLSSYNILINGYCKSKRMN 393
Query: 394 KMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILL 453
+ + +M + P+ ++T+M + A+ +KEM S G PD A +ILL
Sbjct: 394 EAKRLLSEMSEKNLTPDTVTYSTLMQGLCQVGRPREALNLFKEMCSSGLLPDLMAYSILL 453
Query: 454 SLAKTADERNEANELLGNFNHPNNEPGI 481
+EA +LL + +P I
Sbjct: 454 DGFCKHGHLDEALKLLKEMHERRIKPNI 481
Score = 98.6 bits (244), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 62/273 (22%), Positives = 123/273 (45%), Gaps = 3/273 (1%)
Query: 220 YEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVS---KIYDQMQRAGLQPDVVSYAL 276
Y A L M GV + + N L++ V + +M + G+QPD +++
Sbjct: 112 YSSAVSLCNQMDLFGVTHNVYSLNVLINCLCRLSHVDFAVSVMGKMFKLGIQPDAITFNT 171
Query: 277 LINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDR 336
LIN + +EA+ +F EM+ +G P +YN +++ +G A VF+ M ++R
Sbjct: 172 LINGLCNEGKIKEAVGLFNEMVWSGHEPNVISYNTVINGLCKNGNTIMAVRVFRKMEQNR 231
Query: 337 CSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMM 396
P++ +Y T++ + + A +F + G P+V+TY T++ G+ + L +
Sbjct: 232 GKPNVVTYNTIIDSLCKDRLVNEAVEFLSEMVDRGIPPDVVTYNTILHGFCSLGQLNEAT 291
Query: 397 EIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLA 456
++ +M + P+ F ++D K A + M G P+ N L+
Sbjct: 292 RLFKEMVGRNVMPDTVTFNILVDGLCKEGMVSEARCVSETMTEKGAEPNAYTYNALMDGY 351
Query: 457 KTADERNEANELLGNFNHPNNEPGINGLSISVD 489
++ +EA ++LG P ++ +I ++
Sbjct: 352 CLHNQMDEAIKVLGIMIGKGCAPNLSSYNILIN 384
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 66/233 (28%), Positives = 107/233 (45%), Gaps = 4/233 (1%)
Query: 259 YDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAY--NILLDAF 316
+ +M R +P VV + + + K ++ A+++ +M GV TH Y N+L++
Sbjct: 84 FYRMVRMNPRPSVVEFGKFLGSIAKKKQYSSAVSLCNQMDLFGV--THNVYSLNVLINCL 141
Query: 317 AISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNV 376
VD A +V M + PD ++ T+++ N ++ A F + G PNV
Sbjct: 142 CRLSHVDFAVSVMGKMFKLGIQPDAITFNTLINGLCNEGKIKEAVGLFNEMVWSGHEPNV 201
Query: 377 ITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKE 436
I+Y T+I G K N + ++ KM N KPN + TI+D+ K++ + AV + E
Sbjct: 202 ISYNTVINGLCKNGNTIMAVRVFRKMEQNRGKPNVVTYNTIIDSLCKDRLVNEAVEFLSE 261
Query: 437 MESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGINGLSISVD 489
M G PPD N +L + + NEA L N P +I VD
Sbjct: 262 MVDRGIPPDVVTYNTILHGFCSLGQLNEATRLFKEMVGRNVMPDTVTFNILVD 314
>gi|255540881|ref|XP_002511505.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223550620|gb|EEF52107.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 876
Score = 151 bits (382), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 94/340 (27%), Positives = 163/340 (47%), Gaps = 6/340 (1%)
Query: 70 LKQLKKWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAP 129
LKQL+ V WL+ Q ++ + + ++ G+ F K+L M K G P
Sbjct: 354 LKQLQDHTVALNFFYWLKRQPGFNHDGHTYTTMVGILGRAKQFGAINKLLDQMVKDGCQP 413
Query: 130 SVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVF 189
+VV++ L+ +YGR +A +F MQ G P +TY ++ + +A A E++
Sbjct: 414 NVVTYNRLIHSYGRANYLNDAVDVFNEMQRVGCEPDRVTYCTLIDIHAKAGFLDFALEMY 473
Query: 190 MTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFE 249
+ + + L PD + ++I KAG A KLF M E+G + VTYN +++ +
Sbjct: 474 QRM---QAAGLSPDTFTYSVIINCLGKAGHLAAAHKLFCEMVEQGCVPNLVTYNIMIALQ 530
Query: 250 T---NYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTH 306
NY+ K+Y MQ AG QPD V+Y++++ G +EA AVF EM P
Sbjct: 531 AKARNYQSALKLYRDMQSAGFQPDKVTYSIVMEVLGHCGYLDEAEAVFSEMKRKNWVPDE 590
Query: 307 KAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRR 366
Y +L+D + +G V++A ++ M P++ + ++LSA++ + A +
Sbjct: 591 PVYGLLVDLWGKAGNVEKAWQWYQTMLNTGLRPNVPTCNSLLSAFLRVHKLADAYNLLQS 650
Query: 367 LKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNG 406
+ + G P++ TY L+ + + M + M V G
Sbjct: 651 MLELGLNPSLQTYTLLLSCCTEARSPYDMGIYCELMAVTG 690
Score = 125 bits (314), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 72/274 (26%), Positives = 137/274 (50%), Gaps = 7/274 (2%)
Query: 203 DQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSF--ETNY-KEVSKIY 259
D + M+ + +A + KL M + G Q + VTYN L+ NY + ++
Sbjct: 379 DGHTYTTMVGILGRAKQFGAINKLLDQMVKDGCQPNVVTYNRLIHSYGRANYLNDAVDVF 438
Query: 260 DQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAIS 319
++MQR G +PD V+Y LI+ + KA + AL +++ M AG+ P Y+++++ +
Sbjct: 439 NEMQRVGCEPDRVTYCTLIDIHAKAGFLDFALEMYQRMQAAGLSPDTFTYSVIINCLGKA 498
Query: 320 GMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITY 379
G + A +F M C P++ +Y M++ A + + A K +R ++ GF P+ +TY
Sbjct: 499 GHLAAAHKLFCEMVEQGCVPNLVTYNIMIALQAKARNYQSALKLYRDMQSAGFQPDKVTY 558
Query: 380 GTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMES 439
+++ L++ ++ +M+ P++ ++ ++D +GK + + A WY+ M +
Sbjct: 559 SIVMEVLGHCGYLDEAEAVFSEMKRKNWVPDEPVYGLLVDLWGKAGNVEKAWQWYQTMLN 618
Query: 440 CGFPPDQKAKNILLS----LAKTADERNEANELL 469
G P+ N LLS + K AD N +L
Sbjct: 619 TGLRPNVPTCNSLLSAFLRVHKLADAYNLLQSML 652
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 67/233 (28%), Positives = 120/233 (51%), Gaps = 3/233 (1%)
Query: 226 LFALMAERGVQQSTVTYNSLMSFETNYKE---VSKIYDQMQRAGLQPDVVSYALLINAYG 282
+ L + G TY +++ K+ ++K+ DQM + G QP+VV+Y LI++YG
Sbjct: 367 FYWLKRQPGFNHDGHTYTTMVGILGRAKQFGAINKLLDQMVKDGCQPNVVTYNRLIHSYG 426
Query: 283 KARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDIC 342
+A +A+ VF EM G P Y L+D A +G +D A +++ M+ SPD
Sbjct: 427 RANYLNDAVDVFNEMQRVGCEPDRVTYCTLIDIHAKAGFLDFALEMYQRMQAAGLSPDTF 486
Query: 343 SYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKM 402
+Y+ +++ A + A K F + + G VPN++TY +I AK N + +++Y M
Sbjct: 487 TYSVIINCLGKAGHLAAAHKLFCEMVEQGCVPNLVTYNIMIALQAKARNYQSALKLYRDM 546
Query: 403 RVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSL 455
+ G +P++ ++ +M+ G D A + EM+ + PD+ +L+ L
Sbjct: 547 QSAGFQPDKVTYSIVMEVLGHCGYLDEAEAVFSEMKRKNWVPDEPVYGLLVDL 599
Score = 115 bits (287), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 82/346 (23%), Positives = 154/346 (44%), Gaps = 38/346 (10%)
Query: 133 SHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTL 192
++T ++ GR ++ + +M G +P+ +TY ++ + AN +A +VF +
Sbjct: 382 TYTTMVGILGRAKQFGAINKLLDQMVKDGCQPNVVTYNRLIHSYGRANYLNDAVDVFNEM 441
Query: 193 LDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNY 252
++ +PD+ + +I ++ KAG + FAL
Sbjct: 442 ---QRVGCEPDRVTYCTLIDIHAKAGFLD-----FAL----------------------- 470
Query: 253 KEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNIL 312
++Y +MQ AGL PD +Y+++IN GKA A +F EM++ G P YNI+
Sbjct: 471 ----EMYQRMQAAGLSPDTFTYSVIINCLGKAGHLAAAHKLFCEMVEQGCVPNLVTYNIM 526
Query: 313 LDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGF 372
+ A + A +++ M+ PD +Y+ ++ + ++ AE F +K+ +
Sbjct: 527 IALQAKARNYQSALKLYRDMQSAGFQPDKVTYSIVMEVLGHCGYLDEAEAVFSEMKRKNW 586
Query: 373 VPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVV 432
VP+ YG L+ + K N+EK + Y M G++PN +++ A+ + A
Sbjct: 587 VPDEPVYGLLVDLWGKAGNVEKAWQWYQTMLNTGLRPNVPTCNSLLSAFLRVHKLADAYN 646
Query: 433 WYKEMESCGFPPDQKAKNILLSL---AKTADERNEANELLGNFNHP 475
+ M G P + +LLS A++ + EL+ HP
Sbjct: 647 LLQSMLELGLNPSLQTYTLLLSCCTEARSPYDMGIYCELMAVTGHP 692
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 50/217 (23%), Positives = 105/217 (48%)
Query: 263 QRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMV 322
++ G D +Y ++ G+A++ + ++M+ G +P YN L+ ++ + +
Sbjct: 372 RQPGFNHDGHTYTTMVGILGRAKQFGAINKLLDQMVKDGCQPNVVTYNRLIHSYGRANYL 431
Query: 323 DQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTL 382
+ A VF M+R C PD +Y T++ + A ++ A + ++R++ G P+ TY +
Sbjct: 432 NDAVDVFNEMQRVGCEPDRVTYCTLIDIHAKAGFLDFALEMYQRMQAAGLSPDTFTYSVI 491
Query: 383 IKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGF 442
I K +L +++ +M G PN + ++ K +++ SA+ Y++M+S GF
Sbjct: 492 INCLGKAGHLAAAHKLFCEMVEQGCVPNLVTYNIMIALQAKARNYQSALKLYRDMQSAGF 551
Query: 443 PPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEP 479
PD+ +I++ + +EA + N P
Sbjct: 552 QPDKVTYSIVMEVLGHCGYLDEAEAVFSEMKRKNWVP 588
Score = 45.1 bits (105), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 28/105 (26%), Positives = 49/105 (46%), Gaps = 1/105 (0%)
Query: 356 DMEGAEKFFRRLK-QDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIF 414
D A FF LK Q GF + TY T++ + + ++ D+M +G +PN +
Sbjct: 359 DHTVALNFFYWLKRQPGFNHDGHTYTTMVGILGRAKQFGAINKLLDQMVKDGCQPNVVTY 418
Query: 415 TTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTA 459
++ +YG+ + AV + EM+ G PD+ L+ + A
Sbjct: 419 NRLIHSYGRANYLNDAVDVFNEMQRVGCEPDRVTYCTLIDIHAKA 463
>gi|224092436|ref|XP_002309609.1| predicted protein [Populus trichocarpa]
gi|222855585|gb|EEE93132.1| predicted protein [Populus trichocarpa]
Length = 841
Score = 151 bits (382), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 100/359 (27%), Positives = 183/359 (50%), Gaps = 11/359 (3%)
Query: 92 WDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAE 151
W +E+ F +I KQG +A KV M G +VV T LM+ Y + G +A
Sbjct: 290 WVPHEVIFTRVIGVCMKQGKMLEAVKVKGEMLSCGKPMNVVVATTLMKGYCKQGDLDSAL 349
Query: 152 AIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHM-- 209
+F +M +G P+ +TY +I++ + +A E++ + +++ SP +F++
Sbjct: 350 ELFDKMNENGICPNNVTYAVIIEWCCKNGNMDKAYEIYNQMKNKDISP-----TVFNVNS 404
Query: 210 MIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSF---ETNYKEVSKIYDQMQRAG 266
+I Y KA E+A KLF G+ + TYNSL+S+ E E I+++M R G
Sbjct: 405 LIRGYLKARSPEEASKLFDEAVACGIA-NVFTYNSLLSWLCKEGKMSEACSIWEKMVRKG 463
Query: 267 LQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQAR 326
++P VVSY +I + + + A VF EML+ G++P Y++L+D + G + A
Sbjct: 464 VRPSVVSYNNMILGHCQQGDMDSANGVFVEMLEKGLKPNLITYSVLMDGYFKKGDTEYAF 523
Query: 327 TVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGY 386
++ MR + +P + +++ A ++ ++L Q+GF+P +TY +I G+
Sbjct: 524 GLYDRMRGENIAPSDFTCNIIINGLCKAGRTSESQDRLKKLVQEGFIPTCMTYNCIIDGF 583
Query: 387 AKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPD 445
K ++ + +Y +M G+ PN +T +++ + K+ + D A+ EM++ G D
Sbjct: 584 VKEGSVNSALAVYTEMCKIGVSPNVFTYTNLINGFCKSNNMDLALKVMDEMKNKGIELD 642
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 101/448 (22%), Positives = 214/448 (47%), Gaps = 39/448 (8%)
Query: 43 SAVAVLRSERTRGQPLPKDLVLGTL--VRLKQLKKWNVVSEVLEWLRIQSWWDFNEMDFL 100
+A+ +LR R +G +P +++ + V +KQ K V E L N +
Sbjct: 277 AALGLLREMRDKGW-VPHEVIFTRVIGVCMKQGKMLEAVKVKGEMLSCGK--PMNVVVAT 333
Query: 101 MLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSS 160
L+ Y KQGD + A ++ MN+ G P+ V++ ++E + G A I+ +M++
Sbjct: 334 TLMKGYCKQGDLDSALELFDKMNENGICPNNVTYAVIIEWCCKNGNMDKAYEIYNQMKNK 393
Query: 161 GPRPSALTYQIILKLFVEANKFKEAEEVF-----------------MTLLDEE------- 196
P+ +++ +++A +EA ++F ++ L +E
Sbjct: 394 DISPTVFNVNSLIRGYLKARSPEEASKLFDEAVACGIANVFTYNSLLSWLCKEGKMSEAC 453
Query: 197 -------KSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMS-- 247
+ ++P ++ MI + + G + A +F M E+G++ + +TY+ LM
Sbjct: 454 SIWEKMVRKGVRPSVVSYNNMILGHCQQGDMDSANGVFVEMLEKGLKPNLITYSVLMDGY 513
Query: 248 FETNYKEVS-KIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTH 306
F+ E + +YD+M+ + P + ++IN KA R E+ ++++ G PT
Sbjct: 514 FKKGDTEYAFGLYDRMRGENIAPSDFTCNIIINGLCKAGRTSESQDRLKKLVQEGFIPTC 573
Query: 307 KAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRR 366
YN ++D F G V+ A V+ M + SP++ +YT +++ + +++M+ A K
Sbjct: 574 MTYNCIIDGFVKEGSVNSALAVYTEMCKIGVSPNVFTYTNLINGFCKSNNMDLALKVMDE 633
Query: 367 LKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKD 426
+K G +V Y LI G+ + ++ ++ +++ G+ PN+ ++++++ + K ++
Sbjct: 634 MKNKGIELDVTVYCALIDGFCRKGDMVNASQLLSELQEVGLSPNKVVYSSMISGFRKLQN 693
Query: 427 FDSAVVWYKEMESCGFPPDQKAKNILLS 454
++A+ +K M + G P D + L+S
Sbjct: 694 MEAALHLHKRMINEGIPCDLQIYTTLIS 721
Score = 130 bits (326), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 86/356 (24%), Positives = 168/356 (47%), Gaps = 6/356 (1%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
+I + +QGD + A V M +KG P++++++ LM+ Y + G + A ++ RM+
Sbjct: 474 MILGHCQQGDMDSANGVFVEMLEKGLKPNLITYSVLMDGYFKKGDTEYAFGLYDRMRGEN 533
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
PS T II+ +A + E+++ L+ E P ++ +I + K G
Sbjct: 534 IAPSDFTCNIIINGLCKAGRTSESQDRLKKLVQEG---FIPTCMTYNCIIDGFVKEGSVN 590
Query: 222 KARKLFALMAERGVQQSTVTYNSLMS--FETNYKEVS-KIYDQMQRAGLQPDVVSYALLI 278
A ++ M + GV + TY +L++ ++N +++ K+ D+M+ G++ DV Y LI
Sbjct: 591 SALAVYTEMCKIGVSPNVFTYTNLINGFCKSNNMDLALKVMDEMKNKGIELDVTVYCALI 650
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCS 338
+ + + A + E+ + G+ P Y+ ++ F ++ A + K M +
Sbjct: 651 DGFCRKGDMVNASQLLSELQEVGLSPNKVVYSSMISGFRKLQNMEAALHLHKRMINEGIP 710
Query: 339 PDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEI 398
D+ YTT++S + + A + + + G +P++ITY LI G LE +I
Sbjct: 711 CDLQIYTTLISGLLKEGKLLFASELYAEMLAKGIMPDLITYSVLIHGLCNKGQLENAQKI 770
Query: 399 YDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLS 454
+ M + P I+ T++ + K + A + EM G PD +IL++
Sbjct: 771 LEDMDRKCMTPTVFIYNTLITGHFKEGNLQEAFRLHNEMLDKGLVPDDTTYDILVN 826
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 97/385 (25%), Positives = 157/385 (40%), Gaps = 44/385 (11%)
Query: 108 KQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSAL 167
K +A V + M KG + + ++ A R G+ + AE FR ++ G A
Sbjct: 201 KNNMIREARDVYNKMASKGVKGDCATISVMIRASMREGKLEEAEGWFREAKNKGVELDAR 260
Query: 168 TYQIILKLFVEANKFKEAEEVFMTLLDEEKSP-LKPDQKMFHMMIYM------------- 213
Y I+ +EA K + LL E + P + +F +I +
Sbjct: 261 AYSIV----IEAVCKKPDSVAALGLLREMRDKGWVPHEVIFTRVIGVCMKQGKMLEAVKV 316
Query: 214 ----------------------YKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFET- 250
Y K G + A +LF M E G+ + VTY ++ +
Sbjct: 317 KGEMLSCGKPMNVVVATTLMKGYCKQGDLDSALELFDKMNENGICPNNVTYAVIIEWCCK 376
Query: 251 --NYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKA 308
N + +IY+QM+ + P V + LI Y KAR EEA +F+E + G+
Sbjct: 377 NGNMDKAYEIYNQMKNKDISPTVFNVNSLIRGYLKARSPEEASKLFDEAVACGIANVF-T 435
Query: 309 YNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLK 368
YN LL G + +A ++++ M R P + SY M+ + DM+ A F +
Sbjct: 436 YNSLLSWLCKEGKMSEACSIWEKMVRKGVRPSVVSYNNMILGHCQQGDMDSANGVFVEML 495
Query: 369 QDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFD 428
+ G PN+ITY L+ GY K + E +YD+MR I P+ I++ K
Sbjct: 496 EKGLKPNLITYSVLMDGYFKKGDTEYAFGLYDRMRGENIAPSDFTCNIIINGLCKAGRTS 555
Query: 429 SAVVWYKEMESCGFPPDQKAKNILL 453
+ K++ GF P N ++
Sbjct: 556 ESQDRLKKLVQEGFIPTCMTYNCII 580
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 67/296 (22%), Positives = 144/296 (48%), Gaps = 8/296 (2%)
Query: 101 MLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSS 160
++I K G ++++ L + ++G+ P+ +++ +++ + + G +A A++ M
Sbjct: 543 IIINGLCKAGRTSESQDRLKKLVQEGFIPTCMTYNCIIDGFVKEGSVNSALAVYTEMCKI 602
Query: 161 GPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSP-LKPDQKMFHMMIYMYKKAGG 219
G P+ TY ++ F ++N A +V +DE K+ ++ D ++ +I + + G
Sbjct: 603 GVSPNVFTYTNLINGFCKSNNMDLALKV----MDEMKNKGIELDVTVYCALIDGFCRKGD 658
Query: 220 YEKARKLFALMAERGVQQSTVTYNSLMS-FE--TNYKEVSKIYDQMQRAGLQPDVVSYAL 276
A +L + + E G+ + V Y+S++S F N + ++ +M G+ D+ Y
Sbjct: 659 MVNASQLLSELQEVGLSPNKVVYSSMISGFRKLQNMEAALHLHKRMINEGIPCDLQIYTT 718
Query: 277 LINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDR 336
LI+ K + A ++ EML G+ P Y++L+ G ++ A+ + + M R
Sbjct: 719 LISGLLKEGKLLFASELYAEMLAKGIMPDLITYSVLIHGLCNKGQLENAQKILEDMDRKC 778
Query: 337 CSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNL 392
+P + Y T+++ + +++ A + + G VP+ TY L+ G K NL
Sbjct: 779 MTPTVFIYNTLITGHFKEGNLQEAFRLHNEMLDKGLVPDDTTYDILVNGKVKDGNL 834
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 69/270 (25%), Positives = 121/270 (44%), Gaps = 3/270 (1%)
Query: 203 DQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMS--FETN-YKEVSKIY 259
D ++F+ ++ Y K A F + E+ + N +S + N +E +Y
Sbjct: 153 DSRVFNYLLNSYVKTKRINDAVDCFNSLIEKDIVPCLTVMNIFLSELVKNNMIREARDVY 212
Query: 260 DQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAIS 319
++M G++ D + +++I A + + EEA F E + GV +AY+I+++A
Sbjct: 213 NKMASKGVKGDCATISVMIRASMREGKLEEAEGWFREAKNKGVELDARAYSIVIEAVCKK 272
Query: 320 GMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITY 379
A + + MR P +T ++ + M A K + G NV+
Sbjct: 273 PDSVAALGLLREMRDKGWVPHEVIFTRVIGVCMKQGKMLEAVKVKGEMLSCGKPMNVVVA 332
Query: 380 GTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMES 439
TL+KGY K +L+ +E++DKM NGI PN + I++ KN + D A Y +M++
Sbjct: 333 TTLMKGYCKQGDLDSALELFDKMNENGICPNNVTYAVIIEWCCKNGNMDKAYEIYNQMKN 392
Query: 440 CGFPPDQKAKNILLSLAKTADERNEANELL 469
P N L+ A EA++L
Sbjct: 393 KDISPTVFNVNSLIRGYLKARSPEEASKLF 422
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/227 (24%), Positives = 97/227 (42%), Gaps = 4/227 (1%)
Query: 255 VSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLD 314
V+++ + +R + D + L+N+Y K +R +A+ F +++ + P NI L
Sbjct: 138 VARLIESSRRLDFESDSRVFNYLLNSYVKTKRINDAVDCFNSLIEKDIVPCLTVMNIFLS 197
Query: 315 AFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVP 374
+ M+ +AR V+ M D + + M+ A + +E AE +FR K G
Sbjct: 198 ELVKNNMIREARDVYNKMASKGVKGDCATISVMIRASMREGKLEEAEGWFREAKNKGVEL 257
Query: 375 NVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWY 434
+ Y +I+ K + + + +MR G P++ IFT ++ K AV
Sbjct: 258 DARAYSIVIEAVCKKPDSVAALGLLREMRDKGWVPHEVIFTRVIGVCMKQGKMLEAVKVK 317
Query: 435 KEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNH----PNN 477
EM SCG P + L+ + + A EL N PNN
Sbjct: 318 GEMLSCGKPMNVVVATTLMKGYCKQGDLDSALELFDKMNENGICPNN 364
>gi|255661156|gb|ACU25747.1| pentatricopeptide repeat-containing protein [Verbena rigida]
Length = 426
Score = 151 bits (382), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 96/374 (25%), Positives = 183/374 (48%), Gaps = 37/374 (9%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
LI K D++KA + S + + G+ P +V++ A++ +G+ ++ A ++ M+++G
Sbjct: 50 LIELSRKLCDYSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMRTAG 109
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
P+ +Y +L ++VE KF EA +F + E K L D ++MI +Y + G +
Sbjct: 110 VTPNTASYSTLLTMYVENKKFLEALSIFAEM-REIKCLL--DLTTCNIMIDVYGQLGMAK 166
Query: 222 KARKLFALMAERGVQQSTVTYNSLMSFETN---YKEVSKIYDQMQRAGLQPDVVSYALLI 278
+A KLF M + G++ + V+YN+L+ + + E ++ MQR ++ +VV+Y ++
Sbjct: 167 EADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNXMM 226
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCS 338
YGK E+A + +EM + G+ P Y+ ++ + G +D+A +F+ +R
Sbjct: 227 MIYGKTLEHEKANNLIQEMQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVD 286
Query: 339 PDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVP------------------------ 374
D Y TM+ AY A + A++ LK+ +P
Sbjct: 287 IDQVLYQTMIVAYERAGLVAHAKRLLHELKRPDNIPRDIAIHILAGAGRIEEATWVFRQA 346
Query: 375 -------NVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDF 427
++ + +I ++K ++E++DKMR G P+ + +++AYGK +F
Sbjct: 347 IDAGEVKDITVFERMIHLFSKYKKYGNVVEVFDKMRGLGYFPDSNVIALVLNAYGKLHEF 406
Query: 428 DSAVVWYKEMESCG 441
D A Y EM+ G
Sbjct: 407 DKANDVYMEMQEVG 420
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 84/318 (26%), Positives = 146/318 (45%), Gaps = 38/318 (11%)
Query: 200 LKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFE---TNYKEVS 256
L PD+ + +I + K G ++ A M + V V Y++L+ +Y +
Sbjct: 5 LSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDYSKAI 64
Query: 257 KIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAF 316
I+ +++R+G PD+V+Y +IN +GKA+ EA ++ EM AGV P +Y+ LL +
Sbjct: 65 SIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVTPNTASYSTLLTMY 124
Query: 317 AISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNV 376
+ +A ++F MR +C D+ + M+ Y + A+K F +++ G PNV
Sbjct: 125 VENKKFLEALSIFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNV 184
Query: 377 ITYGTLIKGYA---------------KVNNLEK-------MMEIYDK------------- 401
++Y TL++ Y + N+E+ MM IY K
Sbjct: 185 VSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNXMMMIYGKTLEHEKANNLIQE 244
Query: 402 MRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADE 461
M+ GI+PN ++TI+ +GK D A + ++++ S G DQ ++ + A
Sbjct: 245 MQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVDIDQVLYQTMIVAYERAGL 304
Query: 462 RNEANELLGNFNHPNNEP 479
A LL P+N P
Sbjct: 305 VAHAKRLLHELKRPDNIP 322
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 45/181 (24%), Positives = 79/181 (43%)
Query: 301 GVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGA 360
+ P Y+ L+ F G+ D A + + M +DR D+ Y+ ++ D A
Sbjct: 4 ALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDYSKA 63
Query: 361 EKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDA 420
F RLK+ GF P+++ Y +I + K + + +MR G+ PN ++T++
Sbjct: 64 ISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVTPNTASYSTLLTM 123
Query: 421 YGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPG 480
Y +NK F A+ + EM D NI++ + EA++L EP
Sbjct: 124 YVENKKFLEALSIFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPN 183
Query: 481 I 481
+
Sbjct: 184 V 184
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/244 (22%), Positives = 113/244 (46%), Gaps = 6/244 (2%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + + L+ YG F +A + M +K +VV++ +M YG+ ++ A +
Sbjct: 183 NVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNXMMMIYGKTLEHEKANNLI 242
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
+ MQ+ G P+++TY I+ ++ + K A +F L S + DQ ++ MI Y
Sbjct: 243 QEMQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKL---RSSGVDIDQVLYQTMIVAY 299
Query: 215 KKAGGYEKARKLFA-LMAERGVQQSTVTYNSLMSFETNYKEVSKIYDQMQRAGLQPDVVS 273
++AG A++L L + + + +++ +E + ++ Q AG D+
Sbjct: 300 ERAGLVAHAKRLLHELKRPDNIPRDIAIH--ILAGAGRIEEATWVFRQAIDAGEVKDITV 357
Query: 274 YALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMR 333
+ +I+ + K ++ + VF++M G P ++L+A+ D+A V+ M+
Sbjct: 358 FERMIHLFSKYKKYGNVVEVFDKMRGLGYFPDSNVIALVLNAYGKLHEFDKANDVYMEMQ 417
Query: 334 RDRC 337
C
Sbjct: 418 EVGC 421
Score = 58.5 bits (140), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 28/123 (22%), Positives = 64/123 (52%)
Query: 333 RRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNL 392
R SPD +Y+T+++ + + A + ++++QD +++ Y LI+ K+ +
Sbjct: 1 RERALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDY 60
Query: 393 EKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNIL 452
K + I+ +++ +G P+ + +++ +GK K F A EM + G P+ + + L
Sbjct: 61 SKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVTPNTASYSTL 120
Query: 453 LSL 455
L++
Sbjct: 121 LTM 123
>gi|255661144|gb|ACU25741.1| pentatricopeptide repeat-containing protein [Verbena hastata]
Length = 426
Score = 151 bits (382), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 98/374 (26%), Positives = 183/374 (48%), Gaps = 37/374 (9%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
LI K D++KA + S + + G+ P +V++ A++ +G+ ++ A ++ M+++G
Sbjct: 50 LIELSRKLCDYSKAISIFSRLKRSGFMPDLVAYNAMINVFGKAKLFREARSLISEMRTAG 109
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
P+ +Y +L ++VE KF EA VF + E K L D ++MI +Y + G +
Sbjct: 110 VTPNTASYSTLLTMYVENKKFLEALSVFAEM-REIKCLL--DLTTCNIMIDVYGQLGMAK 166
Query: 222 KARKLFALMAERGVQQSTVTYNSLMSFETN---YKEVSKIYDQMQRAGLQPDVVSYALLI 278
+A KLF M + G++ + V+YN+L+ + + E ++ MQR ++ +VV+Y ++
Sbjct: 167 EADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMM 226
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCS 338
YGK E+A + +EM + G+ P Y+ ++ + G +D+A +F+ +R
Sbjct: 227 MIYGKTLEHEKANNLIQEMQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVD 286
Query: 339 PDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVP------------------------ 374
D Y TM+ AY A + A++ LK+ +P
Sbjct: 287 IDQVLYQTMIVAYERAGLVAHAKRLLHELKRPDNIPRDIAIHILAGAGRIEEATWVFRQA 346
Query: 375 -------NVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDF 427
++ + +I ++K ++E++DKMR G P+ + I++AYGK +F
Sbjct: 347 IDAGEVKDITVFERMIHLFSKYKKYGNVVEVFDKMRGLGYFPDSNVIALILNAYGKLHEF 406
Query: 428 DSAVVWYKEMESCG 441
D A Y EM+ G
Sbjct: 407 DKANDVYMEMQEVG 420
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 85/318 (26%), Positives = 146/318 (45%), Gaps = 38/318 (11%)
Query: 200 LKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFE---TNYKEVS 256
L PD+ + +I + K G ++ A M + V V Y++L+ +Y +
Sbjct: 5 LSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDYSKAI 64
Query: 257 KIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAF 316
I+ +++R+G PD+V+Y +IN +GKA+ EA ++ EM AGV P +Y+ LL +
Sbjct: 65 SIFSRLKRSGFMPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVTPNTASYSTLLTMY 124
Query: 317 AISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNV 376
+ +A +VF MR +C D+ + M+ Y + A+K F +++ G PNV
Sbjct: 125 VENKKFLEALSVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNV 184
Query: 377 ITYGTLIKGYA---------------KVNNLEK-------MMEIYDK------------- 401
++Y TL++ Y + N+E+ MM IY K
Sbjct: 185 VSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLIQE 244
Query: 402 MRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADE 461
M+ GI+PN ++TI+ +GK D A + ++++ S G DQ ++ + A
Sbjct: 245 MQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVDIDQVLYQTMIVAYERAGL 304
Query: 462 RNEANELLGNFNHPNNEP 479
A LL P+N P
Sbjct: 305 VAHAKRLLHELKRPDNIP 322
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 45/181 (24%), Positives = 80/181 (44%)
Query: 301 GVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGA 360
+ P Y+ L+ F G+ D A + + M +DR D+ Y+ ++ D A
Sbjct: 4 ALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDYSKA 63
Query: 361 EKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDA 420
F RLK+ GF+P+++ Y +I + K + + +MR G+ PN ++T++
Sbjct: 64 ISIFSRLKRSGFMPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVTPNTASYSTLLTM 123
Query: 421 YGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPG 480
Y +NK F A+ + EM D NI++ + EA++L EP
Sbjct: 124 YVENKKFLEALSVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPN 183
Query: 481 I 481
+
Sbjct: 184 V 184
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 66/309 (21%), Positives = 132/309 (42%), Gaps = 45/309 (14%)
Query: 101 MLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSS 160
++I YG+ G +A+K+ M K G P+VVS+ L+ YG + A +FR MQ
Sbjct: 154 IMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRK 213
Query: 161 GPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGY 220
+ +TY + M+ +Y K +
Sbjct: 214 NIEQNVVTY--------------------------------------NSMMMIYGKTLEH 235
Query: 221 EKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSK---IYDQMQRAGLQPDVVSYALL 277
EKA L M RG++ +++TY++++S ++ + ++ +++ +G+ D V Y +
Sbjct: 236 EKANNLIQEMQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVDIDQVLYQTM 295
Query: 278 INAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRC 337
I AY +A A + E+ RP + +I + A +G +++A VF+
Sbjct: 296 IVAYERAGLVAHAKRLLHEL----KRPDNIPRDIAIHILAGAGRIEEATWVFRQAIDAGE 351
Query: 338 SPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMME 397
DI + M+ + + F +++ G+ P+ ++ Y K++ +K +
Sbjct: 352 VKDITVFERMIHLFSKYKKYGNVVEVFDKMRGLGYFPDSNVIALILNAYGKLHEFDKAND 411
Query: 398 IYDKMRVNG 406
+Y +M+ G
Sbjct: 412 VYMEMQEVG 420
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/241 (24%), Positives = 109/241 (45%), Gaps = 37/241 (15%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + + L+ YG F +A + M +K +VV++ ++M YG+ ++ A +
Sbjct: 183 NVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLI 242
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
+ MQ+ G P+++TY I+ ++ + K A +F L S + DQ ++ MI Y
Sbjct: 243 QEMQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKL---RSSGVDIDQVLYQTMIVAY 299
Query: 215 KKAGGYEKARKLF---------------ALMAERG-VQQSTVTYNS-------------- 244
++AG A++L ++A G ++++T +
Sbjct: 300 ERAGLVAHAKRLLHELKRPDNIPRDIAIHILAGAGRIEEATWVFRQAIDAGEVKDITVFE 359
Query: 245 ----LMSFETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDA 300
L S Y V +++D+M+ G PD AL++NAYGK ++A V+ EM +
Sbjct: 360 RMIHLFSKYKKYGNVVEVFDKMRGLGYFPDSNVIALILNAYGKLHEFDKANDVYMEMQEV 419
Query: 301 G 301
G
Sbjct: 420 G 420
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/123 (22%), Positives = 64/123 (52%)
Query: 333 RRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNL 392
R SPD +Y+T+++ + + A + ++++QD +++ Y LI+ K+ +
Sbjct: 1 RERALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDY 60
Query: 393 EKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNIL 452
K + I+ +++ +G P+ + +++ +GK K F A EM + G P+ + + L
Sbjct: 61 SKAISIFSRLKRSGFMPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVTPNTASYSTL 120
Query: 453 LSL 455
L++
Sbjct: 121 LTM 123
>gi|224125710|ref|XP_002319656.1| predicted protein [Populus trichocarpa]
gi|222858032|gb|EEE95579.1| predicted protein [Populus trichocarpa]
Length = 487
Score = 151 bits (382), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 97/383 (25%), Positives = 180/383 (46%), Gaps = 6/383 (1%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
LI + + +KA +V+ + K G P V ++ A++ + + R ++A+ + RM+ G
Sbjct: 16 LIKGFFNSRNIDKATRVMGILEKHG-KPDVFAYNAVISGFCKANRIESAKTVLDRMKRKG 74
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
P +T+ I++ F K A +VF LL + KP + ++I Y GG +
Sbjct: 75 FSPDVVTHNIMIGTFCGKGKIDLALKVFEELLKDNNC--KPTLITYTILIEAYILEGGID 132
Query: 222 KARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSKIYD---QMQRAGLQPDVVSYALLI 278
+A KL M RG++ T TYN + +V + ++ + G +PDV++Y +L+
Sbjct: 133 EALKLLDEMLSRGLEPDTFTYNVITRGLCKEGKVDRAFEFVRTLNSRGCKPDVITYNILL 192
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCS 338
A + +E E+ G P Y+IL+ + G ++++ + K M+ +
Sbjct: 193 RALLNQGKWDEGEKWMSEIFSRGCEPNVVTYSILISSLCRDGKIEESVNLVKVMKEKGLT 252
Query: 339 PDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEI 398
PD Y +++A+ ++ A +F + DGF+P+++ Y T++ K N + +EI
Sbjct: 253 PDAYCYDPLIAAFCREGKLDMAIEFLDCMICDGFLPDIVNYNTIMAALCKNGNGDHAVEI 312
Query: 399 YDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKT 458
+ K+ G PN + + T++ A + D A+ +M S G PD N L+S
Sbjct: 313 FGKLDEVGCPPNVSSYNTMLSALWSSGDRYRALGMISQMLSKGIDPDVITYNSLISCLCR 372
Query: 459 ADERNEANELLGNFNHPNNEPGI 481
+EA LL + +P I
Sbjct: 373 DGMVDEAIGLLADMLSGRFQPNI 395
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 98/384 (25%), Positives = 189/384 (49%), Gaps = 11/384 (2%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRM-QSS 160
+I+ + K A+ VL M +KG++P VV+H ++ + G+ A +F + + +
Sbjct: 50 VISGFCKANRIESAKTVLDRMKRKGFSPDVVTHNIMIGTFCGKGKIDLALKVFEELLKDN 109
Query: 161 GPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKS-PLKPDQKMFHMMIYMYKKAGG 219
+P+ +TY I+++ ++ EA + LLDE S L+PD ++++ K G
Sbjct: 110 NCKPTLITYTILIEAYILEGGIDEA----LKLLDEMLSRGLEPDTFTYNVITRGLCKEGK 165
Query: 220 YEKARKLFALMAERGVQQSTVTYNSLMSFETN---YKEVSKIYDQMQRAGLQPDVVSYAL 276
++A + + RG + +TYN L+ N + E K ++ G +P+VV+Y++
Sbjct: 166 VDRAFEFVRTLNSRGCKPDVITYNILLRALLNQGKWDEGEKWMSEIFSRGCEPNVVTYSI 225
Query: 277 LINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDR 336
LI++ + + EE++ + + M + G+ P Y+ L+ AF G +D A CM D
Sbjct: 226 LISSLCRDGKIEESVNLVKVMKEKGLTPDAYCYDPLIAAFCREGKLDMAIEFLDCMICDG 285
Query: 337 CSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMM 396
PDI +Y T+++A + + A + F +L + G PNV +Y T++ + + +
Sbjct: 286 FLPDIVNYNTIMAALCKNGNGDHAVEIFGKLDEVGCPPNVSSYNTMLSALWSSGDRYRAL 345
Query: 397 EIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKA-KNILLSL 455
+ +M GI P+ + +++ ++ D A+ +M S F P+ + K +LL L
Sbjct: 346 GMISQMLSKGIDPDVITYNSLISCLCRDGMVDEAIGLLADMLSGRFQPNIVSYKTVLLGL 405
Query: 456 AKTADERNEANELLGNFNHPNNEP 479
K A ++A E+L +P
Sbjct: 406 CK-AHRIDDAIEVLAAMIENGCQP 428
Score = 115 bits (287), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 75/300 (25%), Positives = 137/300 (45%), Gaps = 6/300 (2%)
Query: 108 KQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSAL 167
K+G ++A + + +N +G P V+++ L+ A G++ E + S G P+ +
Sbjct: 162 KEGKVDRAFEFVRTLNSRGCKPDVITYNILLRALLNQGKWDEGEKWMSEIFSRGCEPNVV 221
Query: 168 TYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLF 227
TY I++ K +E+ + + +EK L PD + +I + + G + A +
Sbjct: 222 TYSILISSLCRDGKIEESVNLVKVM--KEKG-LTPDAYCYDPLIAAFCREGKLDMAIEFL 278
Query: 228 ALMAERGVQQSTVTYNSLMSFET---NYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKA 284
M G V YN++M+ N +I+ ++ G P+V SY +++A +
Sbjct: 279 DCMICDGFLPDIVNYNTIMAALCKNGNGDHAVEIFGKLDEVGCPPNVSSYNTMLSALWSS 338
Query: 285 RREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSY 344
AL + +ML G+ P YN L+ GMVD+A + M R P+I SY
Sbjct: 339 GDRYRALGMISQMLSKGIDPDVITYNSLISCLCRDGMVDEAIGLLADMLSGRFQPNIVSY 398
Query: 345 TTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRV 404
T+L A ++ A + + ++G PN TY LI+G + + ME+ + + +
Sbjct: 399 KTVLLGLCKAHRIDDAIEVLAAMIENGCQPNETTYTLLIEGIGFSGSRTQAMELANSLYI 458
Score = 115 bits (287), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 75/324 (23%), Positives = 147/324 (45%), Gaps = 8/324 (2%)
Query: 163 RPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEK 222
+P + ++K F + +A V M +L++ KPD ++ +I + KA E
Sbjct: 7 QPDVILCTKLIKGFFNSRNIDKATRV-MGILEKHG---KPDVFAYNAVISGFCKANRIES 62
Query: 223 ARKLFALMAERGVQQSTVTYNSLMSFETNYKEVS---KIYDQMQR-AGLQPDVVSYALLI 278
A+ + M +G VT+N ++ ++ K+++++ + +P +++Y +LI
Sbjct: 63 AKTVLDRMKRKGFSPDVVTHNIMIGTFCGKGKIDLALKVFEELLKDNNCKPTLITYTILI 122
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCS 338
AY +EAL + +EML G+ P YN++ G VD+A + + C
Sbjct: 123 EAYILEGGIDEALKLLDEMLSRGLEPDTFTYNVITRGLCKEGKVDRAFEFVRTLNSRGCK 182
Query: 339 PDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEI 398
PD+ +Y +L A +N + EK+ + G PNV+TY LI + +E+ + +
Sbjct: 183 PDVITYNILLRALLNQGKWDEGEKWMSEIFSRGCEPNVVTYSILISSLCRDGKIEESVNL 242
Query: 399 YDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKT 458
M+ G+ P+ + ++ A+ + D A+ + M GF PD N +++
Sbjct: 243 VKVMKEKGLTPDAYCYDPLIAAFCREGKLDMAIEFLDCMICDGFLPDIVNYNTIMAALCK 302
Query: 459 ADERNEANELLGNFNHPNNEPGIN 482
+ A E+ G + P ++
Sbjct: 303 NGNGDHAVEIFGKLDEVGCPPNVS 326
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 102/222 (45%), Gaps = 2/222 (0%)
Query: 268 QPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQART 327
QPDV+ LI + +R ++A V +L+ +P AYN ++ F + ++ A+T
Sbjct: 7 QPDVILCTKLIKGFFNSRNIDKATRVMG-ILEKHGKPDVFAYNAVISGFCKANRIESAKT 65
Query: 328 VFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFV-PNVITYGTLIKGY 386
V M+R SPD+ ++ M+ + ++ A K F L +D P +ITY LI+ Y
Sbjct: 66 VLDRMKRKGFSPDVVTHNIMIGTFCGKGKIDLALKVFEELLKDNNCKPTLITYTILIEAY 125
Query: 387 AKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQ 446
+++ +++ D+M G++P+ + I K D A + + + S G PD
Sbjct: 126 ILEGGIDEALKLLDEMLSRGLEPDTFTYNVITRGLCKEGKVDRAFEFVRTLNSRGCKPDV 185
Query: 447 KAKNILLSLAKTADERNEANELLGNFNHPNNEPGINGLSISV 488
NILL + +E + + EP + SI +
Sbjct: 186 ITYNILLRALLNQGKWDEGEKWMSEIFSRGCEPNVVTYSILI 227
Score = 48.1 bits (113), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 34/146 (23%), Positives = 66/146 (45%), Gaps = 5/146 (3%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEA-YGRGGRYKNAEAIFRRMQSS 160
++ A K G+ + A ++ +++ G P+V S+ ++ A + G RY+ A + +M S
Sbjct: 296 IMAALCKNGNGDHAVEIFGKLDEVGCPPNVSSYNTMLSALWSSGDRYR-ALGMISQMLSK 354
Query: 161 GPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGY 220
G P +TY ++ EA + +L +P+ + ++ KA
Sbjct: 355 GIDPDVITYNSLISCLCRDGMVDEAIGLLADMLSGR---FQPNIVSYKTVLLGLCKAHRI 411
Query: 221 EKARKLFALMAERGVQQSTVTYNSLM 246
+ A ++ A M E G Q + TY L+
Sbjct: 412 DDAIEVLAAMIENGCQPNETTYTLLI 437
Score = 47.0 bits (110), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 28/125 (22%), Positives = 63/125 (50%), Gaps = 3/125 (2%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
+++A GD +A ++S M KG P V+++ +L+ R G A + M S
Sbjct: 331 MLSALWSSGDRYRALGMISQMLSKGIDPDVITYNSLISCLCRDGMVDEAIGLLADMLSGR 390
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
+P+ ++Y+ +L +A++ +A EV +++ + +P++ + ++I +G
Sbjct: 391 FQPNIVSYKTVLLGLCKAHRIDDAIEVLAAMIE---NGCQPNETTYTLLIEGIGFSGSRT 447
Query: 222 KARKL 226
+A +L
Sbjct: 448 QAMEL 452
>gi|449513353|ref|XP_004164304.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g06920-like [Cucumis sativus]
Length = 904
Score = 151 bits (382), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 97/374 (25%), Positives = 182/374 (48%), Gaps = 7/374 (1%)
Query: 99 FLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQ 158
F LI + ++G + A +L M P VV + ++ +G+ G+ A F M+
Sbjct: 238 FTTLIRVFAREGRVDAALSLLDEMKSNSLEPDVVLYNVCIDCFGKAGKVDMAWKXFHEMK 297
Query: 159 SSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAG 218
++G +TY ++ + +A++ EA E+F + D+ K P ++ MI Y AG
Sbjct: 298 ANGLVLDDVTYTSMIGVLCKADRLNEAVELFEHM-DQNKQV--PCAYAYNTMIMGYGMAG 354
Query: 219 GYEKARKLFALMAERGVQQSTVTYNSLMSF---ETNYKEVSKIYDQMQRAGLQPDVVSYA 275
+E A L +G S V+YN ++S + E K +++M++ + P++ +Y
Sbjct: 355 KFEDAYSLLERQRRKGCIPSVVSYNCILSCLGRKGQVDEALKKFEEMKKDAI-PNLSTYN 413
Query: 276 LLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRD 335
++I+ KA + E AL V + M DAG+ P NI++D + +D A ++F+ +
Sbjct: 414 IMIDMLCKAGKLETALVVRDAMKDAGLFPNVITVNIMVDRLCKAQRLDDACSIFEGLDHK 473
Query: 336 RCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKM 395
C PD +Y +++ ++ A K + ++ +PN + Y +LI+ + K E
Sbjct: 474 TCRPDAVTYCSLIEGLGRHGRVDEAYKLYEQMLDANQIPNAVVYTSLIRNFFKCGRKEDG 533
Query: 396 MEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSL 455
+IY++M G P+ + T MD K + + ++E+++ GF PD ++ IL+
Sbjct: 534 HKIYNEMLRLGCSPDLLLLNTYMDCVFKAGEIEKGRALFQEIKNLGFIPDARSYTILIHG 593
Query: 456 AKTADERNEANELL 469
A +EA EL
Sbjct: 594 LVKAGFAHEAYELF 607
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 101/401 (25%), Positives = 183/401 (45%), Gaps = 40/401 (9%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGR------------------ 143
+I YG G F A +L +KG PSVVS+ ++ GR
Sbjct: 346 MIMGYGMAGKFEDAYSLLERQRRKGCIPSVVSYNCILSCLGRKGQVDEALKKFEEMKKDA 405
Query: 144 ----------------GGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEE 187
G+ + A + M+ +G P+ +T I++ +A + +A
Sbjct: 406 IPNLSTYNIMIDMLCKAGKLETALVVRDAMKDAGLFPNVITVNIMVDRLCKAQRLDDACS 465
Query: 188 VFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMS 247
+F L + +PD + +I + G ++A KL+ M + + V Y SL+
Sbjct: 466 IFEGL---DHKTCRPDAVTYCSLIEGLGRHGRVDEAYKLYEQMLDANQIPNAVVYTSLIR 522
Query: 248 --FETNYKE-VSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRP 304
F+ KE KIY++M R G PD++ ++ KA E+ A+F+E+ + G P
Sbjct: 523 NFFKCGRKEDGHKIYNEMLRLGCSPDLLLLNTYMDCVFKAGEIEKGRALFQEIKNLGFIP 582
Query: 305 THKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFF 364
++Y IL+ +G +A +F M+ C D +Y T++ + + + A +
Sbjct: 583 DARSYTILIHGLVKAGFAHEAYELFYTMKEQGCVLDTRAYNTVIDGFCKSGKVNKAYQLL 642
Query: 365 RRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKN 424
+K G P V+TYG++I G AK++ L++ ++++ + GI+ N I+++++D +GK
Sbjct: 643 EEMKTKGHEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKGIELNVVIYSSLIDGFGKV 702
Query: 425 KDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEA 465
D A + +E+ G P+ N LL A+E +EA
Sbjct: 703 GRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEISEA 743
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 92/362 (25%), Positives = 177/362 (48%), Gaps = 6/362 (1%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + + LI + K G K+ + M + G +P ++ M+ + G + A+F
Sbjct: 513 NAVVYTSLIRNFFKCGRKEDGHKIYNEMLRLGCSPDLLLLNTYMDCVFKAGEIEKGRALF 572
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
+ +++ G P A +Y I++ V+A EA E+F T+ E+ L D + ++ +I +
Sbjct: 573 QEIKNLGFIPDARSYTILIHGLVKAGFAHEAYELFYTM-KEQGCVL--DTRAYNTVIDGF 629
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSL---MSFETNYKEVSKIYDQMQRAGLQPDV 271
K+G KA +L M +G + + VTY S+ ++ E ++++ + G++ +V
Sbjct: 630 CKSGKVNKAYQLLEEMKTKGHEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKGIELNV 689
Query: 272 VSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKC 331
V Y+ LI+ +GK R +EA + EE++ G+ P +N LLDA + + +A F+
Sbjct: 690 VIYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEISEALVCFQS 749
Query: 332 MRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNN 391
M+ +C+P+ +Y+ ++ A F++ +++ GF PNV TY T+I G AK N
Sbjct: 750 MKDLKCTPNYITYSILIHGLCKIRKFNKAFVFWQEMQKQGFKPNVFTYTTMISGLAKAGN 809
Query: 392 LEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNI 451
+ + +++K + G + I+ I++ A ++E G K +
Sbjct: 810 IVEADTLFEKFKEKGGVADSAIYNAIIEGLSNANRASDAYRLFEEARLKGCSIYTKTCVV 869
Query: 452 LL 453
LL
Sbjct: 870 LL 871
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 93/376 (24%), Positives = 174/376 (46%), Gaps = 6/376 (1%)
Query: 97 MDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRR 156
+ + LI G+ G ++A K+ M P+ V +T+L+ + + GR ++ I+
Sbjct: 480 VTYCSLIEGLGRHGRVDEAYKLYEQMLDANQIPNAVVYTSLIRNFFKCGRKEDGHKIYNE 539
Query: 157 MQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKK 216
M G P L + +A + ++ +F + + PD + + ++I+ K
Sbjct: 540 MLRLGCSPDLLLLNTYMDCVFKAGEIEKGRALFQEI---KNLGFIPDARSYTILIHGLVK 596
Query: 217 AGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSKIY---DQMQRAGLQPDVVS 273
AG +A +LF M E+G T YN+++ +V+K Y ++M+ G +P VV+
Sbjct: 597 AGFAHEAYELFYTMKEQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTKGHEPTVVT 656
Query: 274 YALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMR 333
Y +I+ K R +EA +FEE G+ Y+ L+D F G +D+A + + +
Sbjct: 657 YGSVIDGLAKIDRLDEAYMLFEEAKSKGIELNVVIYSSLIDGFGKVGRIDEAYLIMEELM 716
Query: 334 RDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLE 393
+ +P++ ++ +L A V A ++ A F+ +K PN ITY LI G K+
Sbjct: 717 QKGLTPNVYTWNCLLDALVKAEEISEALVCFQSMKDLKCTPNYITYSILIHGLCKIRKFN 776
Query: 394 KMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILL 453
K + +M+ G KPN +TT++ K + A +++ + G D N ++
Sbjct: 777 KAFVFWQEMQKQGFKPNVFTYTTMISGLAKAGNIVEADTLFEKFKEKGGVADSAIYNAII 836
Query: 454 SLAKTADERNEANELL 469
A+ ++A L
Sbjct: 837 EGLSNANRASDAYRLF 852
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 90/368 (24%), Positives = 164/368 (44%), Gaps = 17/368 (4%)
Query: 90 SWWDFNEM----------DFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALME 139
+W F+EM + +I K N+A ++ M++ P ++ ++
Sbjct: 289 AWKXFHEMKANGLVLDDVTYTSMIGVLCKADRLNEAVELFEHMDQNKQVPCAYAYNTMIM 348
Query: 140 AYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSP 199
YG G++++A ++ R + G PS ++Y IL + EA + F +E K
Sbjct: 349 GYGMAGKFEDAYSLLERQRRKGCIPSVVSYNCILSCLGRKGQVDEALKKF----EEMKKD 404
Query: 200 LKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSL---MSFETNYKEVS 256
P+ +++MI M KAG E A + M + G+ + +T N + + +
Sbjct: 405 AIPNLSTYNIMIDMLCKAGKLETALVVRDAMKDAGLFPNVITVNIMVDRLCKAQRLDDAC 464
Query: 257 KIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAF 316
I++ + +PD V+Y LI G+ R +EA ++E+MLDA P Y L+ F
Sbjct: 465 SIFEGLDHKTCRPDAVTYCSLIEGLGRHGRVDEAYKLYEQMLDANQIPNAVVYTSLIRNF 524
Query: 317 AISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNV 376
G + ++ M R CSPD+ T + A ++E F+ +K GF+P+
Sbjct: 525 FKCGRKEDGHKIYNEMLRLGCSPDLLLLNTYMDCVFKAGEIEKGRALFQEIKNLGFIPDA 584
Query: 377 ITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKE 436
+Y LI G K + E++ M+ G + + T++D + K+ + A +E
Sbjct: 585 RSYTILIHGLVKAGFAHEAYELFYTMKEQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEE 644
Query: 437 MESCGFPP 444
M++ G P
Sbjct: 645 MKTKGHEP 652
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 77/357 (21%), Positives = 140/357 (39%), Gaps = 36/357 (10%)
Query: 133 SHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTL 192
++ +L+ R ++ E I M +G PS T I+ F+++ K +EA T+
Sbjct: 132 AYNSLLMVMARTRKFNCLEQILEEMSIAGFGPSNNTCIEIVLSFIKSRKLREAFTFIQTM 191
Query: 193 LDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNY 252
K +P + +I G +R ++
Sbjct: 192 ---RKLKFRPAFSAYTNLI------GALSTSRDSDCMLT--------------------- 221
Query: 253 KEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNIL 312
++ QMQ G +V + LI + + R + AL++ +EM + P YN+
Sbjct: 222 -----LFQQMQELGYAVNVHLFTTLIRVFAREGRVDAALSLLDEMKSNSLEPDVVLYNVC 276
Query: 313 LDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGF 372
+D F +G VD A F M+ + D +YT+M+ A + A + F + Q+
Sbjct: 277 IDCFGKAGKVDMAWKXFHEMKANGLVLDDVTYTSMIGVLCKADRLNEAVELFEHMDQNKQ 336
Query: 373 VPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVV 432
VP Y T+I GY E + ++ R G P+ + I+ G+ D A+
Sbjct: 337 VPCAYAYNTMIMGYGMAGKFEDAYSLLERQRRKGCIPSVVSYNCILSCLGRKGQVDEALK 396
Query: 433 WYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGINGLSISVD 489
++EM+ P+ NI++ + A + A + P + ++I VD
Sbjct: 397 KFEEMKKDAI-PNLSTYNIMIDMLCKAGKLETALVVRDAMKDAGLFPNVITVNIMVD 452
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/270 (22%), Positives = 112/270 (41%), Gaps = 41/270 (15%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSH--------------------------- 134
+I + K G NKA ++L M KG+ P+VV++
Sbjct: 625 VIDGFCKSGKVNKAYQLLEEMKTKGHEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKG 684
Query: 135 --------TALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAE 186
++L++ +G+ GR A I + G P+ T+ +L V+A + EA
Sbjct: 685 IELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEISEAL 744
Query: 187 EVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLM 246
F ++ D + +P + + ++I+ K + KA + M ++G + + TY +++
Sbjct: 745 VCFQSMKDLKCTP---NYITYSILIHGLCKIRKFNKAFVFWQEMQKQGFKPNVFTYTTMI 801
Query: 247 SF---ETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVR 303
S N E ++++ + G D Y +I A R +A +FEE G
Sbjct: 802 SGLAKAGNIVEADTLFEKFKEKGGVADSAIYNAIIEGLSNANRASDAYRLFEEARLKGCS 861
Query: 304 PTHKAYNILLDAFAISGMVDQARTVFKCMR 333
K +LLD+ + ++QA V +R
Sbjct: 862 IYTKTCVVLLDSLHKAECIEQAAIVGAVLR 891
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/219 (24%), Positives = 100/219 (45%), Gaps = 7/219 (3%)
Query: 93 DFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEA 152
+ N + + LI +GK G ++A ++ + +KG P+V + L++A + A
Sbjct: 686 ELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEISEALV 745
Query: 153 IFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIY 212
F+ M+ P+ +TY I++ + KF +A F+ + +K KP+ + MI
Sbjct: 746 CFQSMKDLKCTPNYITYSILIHGLCKIRKFNKA---FVFWQEMQKQGFKPNVFTYTTMIS 802
Query: 213 MYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSKIYDQMQRAGLQPDVV 272
KAG +A LF E+G + YN+++ +N S Y + A L+ +
Sbjct: 803 GLAKAGNIVEADTLFEKFKEKGGVADSAIYNAIIEGLSNANRASDAYRLFEEARLKGCSI 862
Query: 273 ---SYALLINAYGKARREEEALAVFEEMLDAGVRPTHKA 308
+ +L+++ KA E+A A+ +L + H A
Sbjct: 863 YTKTCVVLLDSLHKAECIEQA-AIVGAVLRETAKAQHAA 900
>gi|15219527|ref|NP_177512.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169780|sp|Q9C9U0.1|PP118_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g73710
gi|12324197|gb|AAG52063.1|AC012679_1 hypothetical protein; 49134-52109 [Arabidopsis thaliana]
gi|332197379|gb|AEE35500.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 991
Score = 151 bits (382), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 101/400 (25%), Positives = 191/400 (47%), Gaps = 19/400 (4%)
Query: 77 NVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTA 136
N+ SE+L +S + + F +I G G ++AE +L M +KG +P ++
Sbjct: 326 NLFSEML-----KSGVPIDTVTFNTMIHTCGTHGHLSEAESLLKKMEEKGISPDTKTYNI 380
Query: 137 LMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEE 196
L+ + G + A +R+++ G P +T++ +L + + E E V + +
Sbjct: 381 LLSLHADAGDIEAALEYYRKIRKVGLFPDTVTHRAVLHILCQRKMVAEVEAVIAEM---D 437
Query: 197 KSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEV- 255
++ ++ D+ +++ MY G +A+ LF ER ++ +L + Y E
Sbjct: 438 RNSIRIDEHSVPVIMQMYVNEGLVVQAKALF----ERFQLDCVLSSTTLAAVIDVYAEKG 493
Query: 256 ------SKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAY 309
+ Y + +G + DV+ Y ++I AYGKA+ E+AL++F+ M + G P Y
Sbjct: 494 LWVEAETVFYGKRNMSGQRNDVLEYNVMIKAYGKAKLHEKALSLFKGMKNQGTWPDECTY 553
Query: 310 NILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQ 369
N L A +VD+A+ + M C P +Y M+++YV + A + +++
Sbjct: 554 NSLFQMLAGVDLVDEAQRILAEMLDSGCKPGCKTYAAMIASYVRLGLLSDAVDLYEAMEK 613
Query: 370 DGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDS 429
G PN + YG+LI G+A+ +E+ ++ + M +G++ N + T+++ AY K +
Sbjct: 614 TGVKPNEVVYGSLINGFAESGMVEEAIQYFRMMEEHGVQSNHIVLTSLIKAYSKVGCLEE 673
Query: 430 AVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELL 469
A Y +M+ PD A N +LSL +EA +
Sbjct: 674 ARRVYDKMKDSEGGPDVAASNSMLSLCADLGIVSEAESIF 713
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 101/440 (22%), Positives = 192/440 (43%), Gaps = 54/440 (12%)
Query: 5 APRKFMQKRRKVEVFKDAADEAGKKNWRRLMNQIEEVGSAVAVL--RSERTRGQPLPKDL 62
A ++ +K RKV +F D + + EV + +A + S R +P +
Sbjct: 393 AALEYYRKIRKVGLFPDTVTHRAVLHILCQRKMVAEVEAVIAEMDRNSIRIDEHSVPVIM 452
Query: 63 VL----GTLVRLKQLKKWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKV 118
+ G +V+ K L + R Q + +I Y ++G + +AE V
Sbjct: 453 QMYVNEGLVVQAKAL-----------FERFQLDCVLSSTTLAAVIDVYAEKGLWVEAETV 501
Query: 119 L-SFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFV 177
N G V+ + +++AYG+ ++ A ++F+ M++ G P TY + ++
Sbjct: 502 FYGKRNMSGQRNDVLEYNVMIKAYGKAKLHEKALSLFKGMKNQGTWPDECTYNSLFQMLA 561
Query: 178 EANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQ 237
+ EA+ + +LD S KP K + MI Y + G
Sbjct: 562 GVDLVDEAQRILAEMLD---SGCKPGCKTYAAMIASYVRLG------------------- 599
Query: 238 STVTYNSLMSFETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEM 297
L+S + +Y+ M++ G++P+ V Y LIN + ++ EEA+ F M
Sbjct: 600 -------LLS------DAVDLYEAMEKTGVKPNEVVYGSLINGFAESGMVEEAIQYFRMM 646
Query: 298 LDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDM 357
+ GV+ H L+ A++ G +++AR V+ M+ PD+ + +MLS + +
Sbjct: 647 EEHGVQSNHIVLTSLIKAYSKVGCLEEARRVYDKMKDSEGGPDVAASNSMLSLCADLGIV 706
Query: 358 EGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTI 417
AE F L++ G +VI++ T++ Y + L++ +E+ ++MR +G+ + T F +
Sbjct: 707 SEAESIFNALREKG-TCDVISFATMMYLYKGMGMLDEAIEVAEEMRESGLLSDCTSFNQV 765
Query: 418 MDAYGKNKDFDSAVVWYKEM 437
M Y + + EM
Sbjct: 766 MACYAADGQLSECCELFHEM 785
Score = 105 bits (263), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 96/401 (23%), Positives = 169/401 (42%), Gaps = 22/401 (5%)
Query: 101 MLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSS 160
ML+ YGK G +A + M ++ + P V+ ++ + G + A+ F+ +
Sbjct: 185 MLVDVYGKAGLVKEALLWIKHMGQRMHFPDEVTMATVVRVFKNSGEFDRADRFFKGWCAG 244
Query: 161 G-----------PRPSALTYQIILKLFVEANKFK-----EAEEVFMTLLDEEKSPLKPD- 203
P+ + + LK F+ FK E+ + SP KP
Sbjct: 245 KVDLDLDSIDDFPKNGSAQSPVNLKQFLSMELFKVGARNPIEKSLHFASGSDSSPRKPRL 304
Query: 204 QKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLM---SFETNYKEVSKIYD 260
F+ +I +Y KAG A LF+ M + GV TVT+N+++ + E +
Sbjct: 305 TSTFNTLIDLYGKAGRLNDAANLFSEMLKSGVPIDTVTFNTMIHTCGTHGHLSEAESLLK 364
Query: 261 QMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISG 320
+M+ G+ PD +Y +L++ + A E AL + ++ G+ P + +L
Sbjct: 365 KMEEKGISPDTKTYNILLSLHADAGDIEAALEYYRKIRKVGLFPDTVTHRAVLHILCQRK 424
Query: 321 MVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYG 380
MV + V M R+ D S ++ YVN + A+ F R + D + + T
Sbjct: 425 MVAEVEAVIAEMDRNSIRIDEHSVPVIMQMYVNEGLVVQAKALFERFQLDCVLSST-TLA 483
Query: 381 TLIKGYA-KVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMES 439
+I YA K +E Y K ++G + + + ++ AYGK K + A+ +K M++
Sbjct: 484 AVIDVYAEKGLWVEAETVFYGKRNMSGQRNDVLEYNVMIKAYGKAKLHEKALSLFKGMKN 543
Query: 440 CGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPG 480
G PD+ N L + D +EA +L +PG
Sbjct: 544 QGTWPDECTYNSLFQMLAGVDLVDEAQRILAEMLDSGCKPG 584
Score = 88.6 bits (218), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 83/396 (20%), Positives = 167/396 (42%), Gaps = 74/396 (18%)
Query: 113 NKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQII 172
++A+++L+ M G P ++ A++ +Y R G +A ++ M+ +G +P+ + Y +
Sbjct: 567 DEAQRILAEMLDSGCKPGCKTYAAMIASYVRLGLLSDAVDLYEAMEKTGVKPNEVVYGSL 626
Query: 173 LKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLF----- 227
+ F E+ +EA + F + E+ ++ + + +I Y K G E+AR+++
Sbjct: 627 INGFAESGMVEEAIQYFRMM---EEHGVQSNHIVLTSLIKAYSKVGCLEEARRVYDKMKD 683
Query: 228 --------------ALMAERG-VQQSTVTYNSL--------MSFETN---YK------EV 255
+L A+ G V ++ +N+L +SF T YK E
Sbjct: 684 SEGGPDVAASNSMLSLCADLGIVSEAESIFNALREKGTCDVISFATMMYLYKGMGMLDEA 743
Query: 256 SKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEML----------------- 298
++ ++M+ +GL D S+ ++ Y + E +F EML
Sbjct: 744 IEVAEEMRESGLLSDCTSFNQVMACYAADGQLSECCELFHEMLVERKLLLDWGTFKTLFT 803
Query: 299 --------DAGVRPTHKAYN---------ILLDAFAISGMVDQARTVFKCMRRDRCSPDI 341
V AYN I F+ G+ A + + +
Sbjct: 804 LLKKGGVPSEAVSQLQTAYNEAKPLATPAITATLFSAMGLYAYALESCQELTSGEIPREH 863
Query: 342 CSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDK 401
+Y ++ Y + D++ A K + R+++ G P+++T L+ Y K +E + ++ +
Sbjct: 864 FAYNAVIYTYSASGDIDMALKAYMRMQEKGLEPDIVTQAYLVGIYGKAGMVEGVKRVHSR 923
Query: 402 MRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEM 437
+ ++P+Q++F + DAY D A V KEM
Sbjct: 924 LTFGELEPSQSLFKAVRDAYVSANRQDLADVVKKEM 959
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 64/274 (23%), Positives = 115/274 (41%), Gaps = 23/274 (8%)
Query: 245 LMSFETNYKEVSKIYDQMQ-RAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVR 303
L+ +T ++ V +++ Q P+V+ Y +++ A G+A + +E + EM GV
Sbjct: 118 LLKEQTRWERVLRVFRFFQSHQSYVPNVIHYNIVLRALGRAGKWDELRLCWIEMAHNGVL 177
Query: 304 PTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKF 363
PT+ Y +L+D + +G+V +A K M + PD + T++ + N+ + + A++F
Sbjct: 178 PTNNTYGMLVDVYGKAGLVKEALLWIKHMGQRMHFPDEVTMATVVRVFKNSGEFDRADRF 237
Query: 364 FRR---------------LKQDGFVPNVITYGT-----LIKGYAKVNNLEKMMEIYDKMR 403
F+ ++G + + L K A+ N +EK +
Sbjct: 238 FKGWCAGKVDLDLDSIDDFPKNGSAQSPVNLKQFLSMELFKVGAR-NPIEKSLHFASGSD 296
Query: 404 VNGIKPNQT-IFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADER 462
+ KP T F T++D YGK + A + EM G P D N ++ T
Sbjct: 297 SSPRKPRLTSTFNTLIDLYGKAGRLNDAANLFSEMLKSGVPIDTVTFNTMIHTCGTHGHL 356
Query: 463 NEANELLGNFNHPNNEPGINGLSISVDEEDDDDD 496
+EA LL P +I + D D
Sbjct: 357 SEAESLLKKMEEKGISPDTKTYNILLSLHADAGD 390
>gi|326522214|dbj|BAK04235.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 966
Score = 151 bits (382), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 105/412 (25%), Positives = 182/412 (44%), Gaps = 31/412 (7%)
Query: 61 DLVLGT--LVRLKQLKKWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKV 118
D VL T + L + +N L +R S+ N + + L+T + K+ +++
Sbjct: 270 DTVLCTQMISGLMEASLFNEAMSFLHRMRCNSYIP-NVVTYRTLLTGFLKKKQLGWCKRI 328
Query: 119 LSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVE 178
++ M +G PS +L+ Y Y A +F RM + G P + Y I +
Sbjct: 329 INMMMTEGCNPSPSLFNSLVHTYCNAEDYAYAYKLFNRMNTCGCPPGYVVYNIFIGSICG 388
Query: 179 ANKFKE------AEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAE 232
+ AE+V+ +L K + F + G +EKA ++ M
Sbjct: 389 REELPNPELLDLAEKVYEEMLVASCVLNKINTANFARCLC---GVGKFEKAFQIVKEMMR 445
Query: 233 RGVQQSTVTYNSLMSFETNYKEVSK---IYDQMQRAGLQPDVVSYALLINAYGKARREEE 289
+G TY +++F K V K ++ +M++ G+ PDV +Y +LI+++ KA E+
Sbjct: 446 KGFVPDASTYTKVITFLCQAKRVDKAFLLFQEMKKVGVNPDVYTYTILIDSFCKAGLIEQ 505
Query: 290 ALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLS 349
A + F+EM AG P Y LL A+ S + QA +F M D C P+ +Y+ ++
Sbjct: 506 AQSWFDEMRSAGCSPNVVTYTALLHAYLKSKQLYQANDIFHRMVGDACYPNAITYSALID 565
Query: 350 AYVNASDMEGAEKFFRRL----------------KQDGFVPNVITYGTLIKGYAKVNNLE 393
A +++ A + + +L D PNV+TYG L+ G K +
Sbjct: 566 GLCKAGEIQKACEVYAKLIGTSDNIESDFYFEGKDTDTISPNVVTYGALVNGLCKAQKVS 625
Query: 394 KMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPD 445
++ D M G +PNQ ++ ++D + K + DSA + M CG+ P
Sbjct: 626 DAHDLLDAMLAAGCEPNQIVYDALVDGFCKVGEIDSAQEVFLRMTKCGYLPS 677
Score = 145 bits (365), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 95/388 (24%), Positives = 176/388 (45%), Gaps = 31/388 (7%)
Query: 94 FNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAI 153
N +F + GK F KA +++ M +KG+ P ++T ++ + R A +
Sbjct: 418 INTANFARCLCGVGK---FEKAFQIVKEMMRKGFVPDASTYTKVITFLCQAKRVDKAFLL 474
Query: 154 FRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSP-LKPDQKMFHMMIY 212
F+ M+ G P TY I++ F +A ++A+ F DE +S P+ + +++
Sbjct: 475 FQEMKKVGVNPDVYTYTILIDSFCKAGLIEQAQSWF----DEMRSAGCSPNVVTYTALLH 530
Query: 213 MYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSK---IYDQMQRAG--- 266
Y K+ +A +F M + +TY++L+ E+ K +Y ++
Sbjct: 531 AYLKSKQLYQANDIFHRMVGDACYPNAITYSALIDGLCKAGEIQKACEVYAKLIGTSDNI 590
Query: 267 -------------LQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILL 313
+ P+VV+Y L+N KA++ +A + + ML AG P Y+ L+
Sbjct: 591 ESDFYFEGKDTDTISPNVVTYGALVNGLCKAQKVSDAHDLLDAMLAAGCEPNQIVYDALV 650
Query: 314 DAFAISGMVDQARTVFKCMRRDRCS--PDICSYTTMLSAYVNASDMEGAEKFFRRLKQDG 371
D F G +D A+ VF +R +C P + +YT+++ ++ A K ++ +D
Sbjct: 651 DGFCKVGEIDSAQEVF--LRMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDS 708
Query: 372 FVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAV 431
PNV+TY ++ G K EK + + M G PN +T ++D GK D+ +
Sbjct: 709 CNPNVVTYTAMVDGLCKTGETEKALNLLSLMEKKGCSPNVVTYTALIDGLGKAGKVDAGL 768
Query: 432 VWYKEMESCGFPPDQKAKNILLSLAKTA 459
+ +M++ G P+ IL++ A
Sbjct: 769 ELFMQMKTKGCAPNYVTYRILINHCCAA 796
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 93/387 (24%), Positives = 171/387 (44%), Gaps = 20/387 (5%)
Query: 99 FLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQ 158
+ +LI ++ K G +A+ M G +P+VV++TAL+ AY + + A IF RM
Sbjct: 490 YTILIDSFCKAGLIEQAQSWFDEMRSAGCSPNVVTYTALLHAYLKSKQLYQANDIFHRMV 549
Query: 159 SSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLD-------------EEKSPLKPDQK 205
P+A+TY ++ +A + ++A EV+ L+ ++ + P+
Sbjct: 550 GDACYPNAITYSALIDGLCKAGEIQKACEVYAKLIGTSDNIESDFYFEGKDTDTISPNVV 609
Query: 206 MFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEV---SKIYDQM 262
+ ++ KA A L M G + + + Y++L+ E+ +++ +M
Sbjct: 610 TYGALVNGLCKAQKVSDAHDLLDAMLAAGCEPNQIVYDALVDGFCKVGEIDSAQEVFLRM 669
Query: 263 QRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMV 322
+ G P V +Y LI+ K R + A+ V +ML P Y ++D +G
Sbjct: 670 TKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCNPNVVTYTAMVDGLCKTGET 729
Query: 323 DQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTL 382
++A + M + CSP++ +YT ++ A ++ + F ++K G PN +TY L
Sbjct: 730 EKALNLLSLMEKKGCSPNVVTYTALIDGLGKAGKVDAGLELFMQMKTKGCAPNYVTYRIL 789
Query: 383 IKGYAKVNNLEKMMEIYDKMR-VNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCG 441
I L+ + D+M+ + K Q TT+ G +K F +++ +EMES
Sbjct: 790 INHCCAAGLLDDAHLLLDEMKQTHWPKYLQGYRTTVQ---GFSKRFLASLGLLEEMESHD 846
Query: 442 FPPDQKAKNILLSLAKTADERNEANEL 468
P +L+ A A EL
Sbjct: 847 TAPIAPVYGMLIDSFSKAGRLETALEL 873
Score = 99.0 bits (245), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 84/391 (21%), Positives = 163/391 (41%), Gaps = 23/391 (5%)
Query: 101 MLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSS 160
+L+ QG + +A + L + GY PS V++ AL++ G+ + A + + M +S
Sbjct: 174 VLVRRCCLQGLWGEALEELGRLKDFGYRPSAVTYNALVQVLASAGQVEMAFRVQKEMSAS 233
Query: 161 GPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGY 220
G T + + ++ +A ++ E+ K D + MI +A +
Sbjct: 234 GFCMDRSTVGSFAQALCKEGRWGDALDLL------EREDFKLDTVLCTQMISGLMEASLF 287
Query: 221 EKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVS---KIYDQMQRAGLQPDVVSYALL 277
+A M + VTY +L++ K++ +I + M G P + L
Sbjct: 288 NEAMSFLHRMRCNSYIPNVVTYRTLLTGFLKKKQLGWCKRIINMMMTEGCNPSPSLFNSL 347
Query: 278 INAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISG--------MVDQARTVF 329
++ Y A A +F M G P + YNI + +I G ++D A V+
Sbjct: 348 VHTYCNAEDYAYAYKLFNRMNTCGCPPGYVVYNIFIG--SICGREELPNPELLDLAEKVY 405
Query: 330 KCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKV 389
+ M C + + E A + + + + GFVP+ TY +I +
Sbjct: 406 EEMLVASCVLNKINTANFARCLCGVGKFEKAFQIVKEMMRKGFVPDASTYTKVITFLCQA 465
Query: 390 NNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAK 449
++K ++ +M+ G+ P+ +T ++D++ K + A W+ EM S G P+
Sbjct: 466 KRVDKAFLLFQEMKKVGVNPDVYTYTILIDSFCKAGLIEQAQSWFDEMRSAGCSPNVVTY 525
Query: 450 NILLSLAKTADERNEANEL----LGNFNHPN 476
LL + + +AN++ +G+ +PN
Sbjct: 526 TALLHAYLKSKQLYQANDIFHRMVGDACYPN 556
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 78/343 (22%), Positives = 149/343 (43%), Gaps = 42/343 (12%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + + L+ K + A +L M G P+ + + AL++ + + G +A+ +F
Sbjct: 607 NVVTYGALVNGLCKAQKVSDAHDLLDAMLAAGCEPNQIVYDALVDGFCKVGEIDSAQEVF 666
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
RM G PS TY ++ + + A +V +L K P+ + M+
Sbjct: 667 LRMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQML---KDSCNPNVVTYTAMVDGL 723
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVS---KIYDQMQRAGLQPDV 271
K G EKA L +LM ++G + VTY +L+ +V +++ QM+ G P+
Sbjct: 724 CKTGETEKALNLLSLMEKKGCSPNVVTYTALIDGLGKAGKVDAGLELFMQMKTKGCAPNY 783
Query: 272 VSYALLIN---------------------------------AYGKARREEEALAVFEEML 298
V+Y +LIN G ++R +L + EEM
Sbjct: 784 VTYRILINHCCAAGLLDDAHLLLDEMKQTHWPKYLQGYRTTVQGFSKRFLASLGLLEEME 843
Query: 299 DAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICS---YTTMLSAYVNAS 355
P Y +L+D+F+ +G ++ A + K M S ++ S +T+++ A +S
Sbjct: 844 SHDTAPIAPVYGMLIDSFSKAGRLETALELHKEMMEVSSSLNMASKDMHTSLIQALCLSS 903
Query: 356 DMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEI 398
+E A + +++ G VP++ + L+KG + N + +++
Sbjct: 904 QVEEAVALYSEMRRRGIVPDLSAFVCLVKGLIERNKWNEALQL 946
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 70/316 (22%), Positives = 133/316 (42%), Gaps = 42/316 (13%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N++ + L+ + K G+ + A++V M K GY PSV ++T+L++ + GR A +
Sbjct: 642 NQIVYDALVDGFCKVGEIDSAQEVFLRMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVL 701
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
+M P+ +TY ++ K E E+ L EK P+ + +I
Sbjct: 702 SQMLKDSCNPNVVTYTAMVDGLC---KTGETEKALNLLSLMEKKGCSPNVVTYTALIDGL 758
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSLMS--------------------------- 247
KAG + +LF M +G + VTY L++
Sbjct: 759 GKAGKVDAGLELFMQMKTKGCAPNYVTYRILINHCCAAGLLDDAHLLLDEMKQTHWPKYL 818
Query: 248 --FETNYKEVSK-------IYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEML 298
+ T + SK + ++M+ P Y +LI+++ KA R E AL + +EM+
Sbjct: 819 QGYRTTVQGFSKRFLASLGLLEEMESHDTAPIAPVYGMLIDSFSKAGRLETALELHKEMM 878
Query: 299 DAGVR---PTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNAS 355
+ + + L+ A +S V++A ++ MRR PD+ ++ ++ + +
Sbjct: 879 EVSSSLNMASKDMHTSLIQALCLSSQVEEAVALYSEMRRRGIVPDLSAFVCLVKGLIERN 938
Query: 356 DMEGAEKFFRRLKQDG 371
A + + Q+G
Sbjct: 939 KWNEALQLCYGICQEG 954
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 58/244 (23%), Positives = 109/244 (44%), Gaps = 36/244 (14%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + + ++ K G+ KA +LS M KKG +P+VV++TAL++ G+ G+ +F
Sbjct: 712 NVVTYTAMVDGLCKTGETEKALNLLSLMEKKGCSPNVVTYTALIDGLGKAGKVDAGLELF 771
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANK----------------------FKEAEEVF--- 189
+M++ G P+ +TY+I++ A ++ + F
Sbjct: 772 MQMKTKGCAPNYVTYRILINHCCAAGLLDDAHLLLDEMKQTHWPKYLQGYRTTVQGFSKR 831
Query: 190 ----MTLLDE-EKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVT--- 241
+ LL+E E P ++ M+I + KAG E A +L M E + +
Sbjct: 832 FLASLGLLEEMESHDTAPIAPVYGMLIDSFSKAGRLETALELHKEMMEVSSSLNMASKDM 891
Query: 242 YNSL---MSFETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEML 298
+ SL + + +E +Y +M+R G+ PD+ ++ L+ + + EAL + +
Sbjct: 892 HTSLIQALCLSSQVEEAVALYSEMRRRGIVPDLSAFVCLVKGLIERNKWNEALQLCYGIC 951
Query: 299 DAGV 302
GV
Sbjct: 952 QEGV 955
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 78/373 (20%), Positives = 133/373 (35%), Gaps = 15/373 (4%)
Query: 126 GYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEA 185
GY + + AL E G + AE + R + ++++ + EA
Sbjct: 129 GYKHTGACYDALAEVLGFEDPARTAERLLREIGEDDRDVLGRLLNVLVRRCCLQGLWGEA 188
Query: 186 EEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSL 245
E L D +P ++ ++ + AG E A ++ M+ G T S
Sbjct: 189 LEELGRLKD---FGYRPSAVTYNALVQVLASAGQVEMAFRVQKEMSASGFCMDRSTVGSF 245
Query: 246 MSFETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPT 305
D ++R + D V +I+ +A EA++ M P
Sbjct: 246 AQALCKEGRWGDALDLLEREDFKLDTVLCTQMISGLMEASLFNEAMSFLHRMRCNSYIPN 305
Query: 306 HKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFR 365
Y LL F + + + M + C+P + +++ Y NA D A K F
Sbjct: 306 VVTYRTLLTGFLKKKQLGWCKRIINMMMTEGCNPSPSLFNSLVHTYCNAEDYAYAYKLFN 365
Query: 366 RLKQDGFVPNVITYGTLIK---GYAKVNN---LEKMMEIYDKMRVNGI---KPNQTIFTT 416
R+ G P + Y I G ++ N L+ ++Y++M V K N F
Sbjct: 366 RMNTCGCPPGYVVYNIFIGSICGREELPNPELLDLAEKVYEEMLVASCVLNKINTANFAR 425
Query: 417 IMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPN 476
+ GK F+ A KEM GF PD +++ A ++A L
Sbjct: 426 CLCGVGK---FEKAFQIVKEMMRKGFVPDASTYTKVITFLCQAKRVDKAFLLFQEMKKVG 482
Query: 477 NEPGINGLSISVD 489
P + +I +D
Sbjct: 483 VNPDVYTYTILID 495
>gi|299471535|emb|CBN80021.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 607
Score = 151 bits (382), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 98/380 (25%), Positives = 172/380 (45%), Gaps = 6/380 (1%)
Query: 103 ITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGP 162
I + K G + A ++ M G AP V+S+++ + A GRGGR++ A +F M++SG
Sbjct: 145 INSCAKAGQWEIAVSLVKEMATVGLAPDVISYSSAISACGRGGRWEEALELFEDMRTSGV 204
Query: 163 RPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEK 222
P +TY + ++KEA + + L P+ + +I K G ++
Sbjct: 205 APDVITYGSAIAACANGGRWKEAVSLLRKI---PTVGLTPNVISYSSVITACAKEGQWKI 261
Query: 223 ARKLFALMAERGVQQSTVTYNSLMSFETN---YKEVSKIYDQMQRAGLQPDVVSYALLIN 279
A L M + + +TYN+ + +KE + +M GL PDVVSY+ +I+
Sbjct: 262 ALDLLREMKAMRLAPNIITYNAAIDACAKGGRWKEAIDLLREMPTVGLPPDVVSYSSVID 321
Query: 280 AYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSP 339
A K R +EA+ + EM G+ P +YN +DA A G +A+ + + M +
Sbjct: 322 ACSKGDRWKEAIDILREMPTVGLSPNAISYNSAIDACAKGGQWKEAKGLLREMPTAGVTQ 381
Query: 340 DICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIY 399
+ Y + ++A + A R + G V +Y + I K N K E+
Sbjct: 382 RVIGYNSAIAACAKGEQWKEALALLREMPTVGLHTTVFSYSSAIDACGKGNLWIKAKELL 441
Query: 400 DKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTA 459
+M G+ PN+ + + +DA G+ ++ AV +EM + G PD + + ++
Sbjct: 442 REMATVGLAPNEVCYNSAIDACGRGDQWEEAVDLLREMPTVGLSPDVFSYSSAIAACAKG 501
Query: 460 DERNEANELLGNFNHPNNEP 479
D+ EA +L + P
Sbjct: 502 DQWKEALAVLKEMSAAGLAP 521
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 91/381 (23%), Positives = 184/381 (48%), Gaps = 6/381 (1%)
Query: 92 WDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAE 151
W ++ + M ITA G+ G + +A ++L M +G AP + +++A+++A +GG++K A
Sbjct: 29 WLIDQKSYCMAITACGRGGQWEQAVRLLREMPTEGAAPDLSAYSAVIDACAKGGQWKMAV 88
Query: 152 AIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMI 211
M + G P A +Y + ++K A ++ +L + + P+ +++ I
Sbjct: 89 FFLMEMPTKGIAPDARSYGAAINACARGGRWKIALDLLREMLARD---VTPNVIIYNSAI 145
Query: 212 YMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSF---ETNYKEVSKIYDQMQRAGLQ 268
KAG +E A L MA G+ ++Y+S +S ++E ++++ M+ +G+
Sbjct: 146 NSCAKAGQWEIAVSLVKEMATVGLAPDVISYSSAISACGRGGRWEEALELFEDMRTSGVA 205
Query: 269 PDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTV 328
PDV++Y I A R +EA+++ ++ G+ P +Y+ ++ A A G A +
Sbjct: 206 PDVITYGSAIAACANGGRWKEAVSLLRKIPTVGLTPNVISYSSVITACAKEGQWKIALDL 265
Query: 329 FKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAK 388
+ M+ R +P+I +Y + A + A R + G P+V++Y ++I +K
Sbjct: 266 LREMKAMRLAPNIITYNAAIDACAKGGRWKEAIDLLREMPTVGLPPDVVSYSSVIDACSK 325
Query: 389 VNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKA 448
+ ++ ++I +M G+ PN + + +DA K + A +EM + G
Sbjct: 326 GDRWKEAIDILREMPTVGLSPNAISYNSAIDACAKGGQWKEAKGLLREMPTAGVTQRVIG 385
Query: 449 KNILLSLAKTADERNEANELL 469
N ++ ++ EA LL
Sbjct: 386 YNSAIAACAKGEQWKEALALL 406
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 94/366 (25%), Positives = 172/366 (46%), Gaps = 7/366 (1%)
Query: 108 KQGDFNKAEKVLSFMNK-KGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSA 166
+ GD+ KA + + M K G+ S+ + A GRGG+++ A + R M + G P
Sbjct: 9 RSGDWRKALRAVDGMKKLPGWLIDQKSYCMAITACGRGGQWEQAVRLLREMPTEGAAPDL 68
Query: 167 LTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKL 226
Y ++ + ++K A VF L++ + PD + + I + G ++ A L
Sbjct: 69 SAYSAVIDACAKGGQWKMA--VFF-LMEMPTKGIAPDARSYGAAINACARGGRWKIALDL 125
Query: 227 FALMAERGVQQSTVTYNSLM---SFETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGK 283
M R V + + YNS + + ++ + +M GL PDV+SY+ I+A G+
Sbjct: 126 LREMLARDVTPNVIIYNSAINSCAKAGQWEIAVSLVKEMATVGLAPDVISYSSAISACGR 185
Query: 284 ARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICS 343
R EEAL +FE+M +GV P Y + A A G +A ++ + + +P++ S
Sbjct: 186 GGRWEEALELFEDMRTSGVAPDVITYGSAIAACANGGRWKEAVSLLRKIPTVGLTPNVIS 245
Query: 344 YTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMR 403
Y+++++A + A R +K PN+ITY I AK ++ +++ +M
Sbjct: 246 YSSVITACAKEGQWKIALDLLREMKAMRLAPNIITYNAAIDACAKGGRWKEAIDLLREMP 305
Query: 404 VNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERN 463
G+ P+ +++++DA K + A+ +EM + G P+ + N + +
Sbjct: 306 TVGLPPDVVSYSSVIDACSKGDRWKEAIDILREMPTVGLSPNAISYNSAIDACAKGGQWK 365
Query: 464 EANELL 469
EA LL
Sbjct: 366 EAKGLL 371
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 89/354 (25%), Positives = 165/354 (46%), Gaps = 6/354 (1%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + + +ITA K+G + A +L M AP+++++ A ++A +GGR+K A +
Sbjct: 242 NVISYSSVITACAKEGQWKIALDLLREMKAMRLAPNIITYNAAIDACAKGGRWKEAIDLL 301
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
R M + G P ++Y ++ + +++KEA ++ L + L P+ ++ I
Sbjct: 302 REMPTVGLPPDVVSYSSVIDACSKGDRWKEAIDI---LREMPTVGLSPNAISYNSAIDAC 358
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFET---NYKEVSKIYDQMQRAGLQPDV 271
K G +++A+ L M GV Q + YNS ++ +KE + +M GL V
Sbjct: 359 AKGGQWKEAKGLLREMPTAGVTQRVIGYNSAIAACAKGEQWKEALALLREMPTVGLHTTV 418
Query: 272 VSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKC 331
SY+ I+A GK +A + EM G+ P YN +DA ++A + +
Sbjct: 419 FSYSSAIDACGKGNLWIKAKELLREMATVGLAPNEVCYNSAIDACGRGDQWEEAVDLLRE 478
Query: 332 MRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNN 391
M SPD+ SY++ ++A + A + + G P++I Y + I +K
Sbjct: 479 MPTVGLSPDVFSYSSAIAACAKGDQWKEALAVLKEMSAAGLAPDLICYNSAIDACSKGGR 538
Query: 392 LEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPD 445
+ + + +MR G+ PN +++ +DA + + + +EM G PD
Sbjct: 539 WKMAVALLGEMRAAGLTPNIISYSSAIDACVRGGQWKEGIALLEEMRGSGVVPD 592
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 90/329 (27%), Positives = 148/329 (44%), Gaps = 35/329 (10%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + + I A K G + +A +L M G P VVS++++++A +G R+K A I
Sbjct: 277 NIITYNAAIDACAKGGRWKEAIDLLREMPTVGLPPDVVSYSSVIDACSKGDRWKEAIDIL 336
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLL--------------------- 193
R M + G P+A++Y + + ++KEA+ + +
Sbjct: 337 REMPTVGLSPNAISYNSAIDACAKGGQWKEAKGLLREMPTAGVTQRVIGYNSAIAACAKG 396
Query: 194 DEEKSPLKPDQKM----FHMMIYMYK-------KAGGYEKARKLFALMAERGVQQSTVTY 242
++ K L ++M H ++ Y K + KA++L MA G+ + V Y
Sbjct: 397 EQWKEALALLREMPTVGLHTTVFSYSSAIDACGKGNLWIKAKELLREMATVGLAPNEVCY 456
Query: 243 NSLMSFET---NYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLD 299
NS + ++E + +M GL PDV SY+ I A K + +EALAV +EM
Sbjct: 457 NSAIDACGRGDQWEEAVDLLREMPTVGLSPDVFSYSSAIAACAKGDQWKEALAVLKEMSA 516
Query: 300 AGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEG 359
AG+ P YN +DA + G A + MR +P+I SY++ + A V +
Sbjct: 517 AGLAPDLICYNSAIDACSKGGRWKMAVALLGEMRAAGLTPNIISYSSAIDACVRGGQWKE 576
Query: 360 AEKFFRRLKQDGFVPNVITYGTLIKGYAK 388
++ G VP+VITY L+ AK
Sbjct: 577 GIALLEEMRGSGVVPDVITYHALMVTCAK 605
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 76/303 (25%), Positives = 129/303 (42%), Gaps = 3/303 (0%)
Query: 203 DQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFET---NYKEVSKIY 259
DQK + M I + G +E+A +L M G Y++++ +K
Sbjct: 32 DQKSYCMAITACGRGGQWEQAVRLLREMPTEGAAPDLSAYSAVIDACAKGGQWKMAVFFL 91
Query: 260 DQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAIS 319
+M G+ PD SY INA + R + AL + EML V P YN +++ A +
Sbjct: 92 MEMPTKGIAPDARSYGAAINACARGGRWKIALDLLREMLARDVTPNVIIYNSAINSCAKA 151
Query: 320 GMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITY 379
G + A ++ K M +PD+ SY++ +SA E A + F ++ G P+VITY
Sbjct: 152 GQWEIAVSLVKEMATVGLAPDVISYSSAISACGRGGRWEEALELFEDMRTSGVAPDVITY 211
Query: 380 GTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMES 439
G+ I A ++ + + K+ G+ PN +++++ A K + A+ +EM++
Sbjct: 212 GSAIAACANGGRWKEAVSLLRKIPTVGLTPNVISYSSVITACAKEGQWKIALDLLREMKA 271
Query: 440 CGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGINGLSISVDEEDDDDDDDE 499
P+ N + EA +LL P + S +D D E
Sbjct: 272 MRLAPNIITYNAAIDACAKGGRWKEAIDLLREMPTVGLPPDVVSYSSVIDACSKGDRWKE 331
Query: 500 DDD 502
D
Sbjct: 332 AID 334
>gi|225445222|ref|XP_002280919.1| PREDICTED: pentatricopeptide repeat-containing protein At5g21222
[Vitis vinifera]
gi|297738818|emb|CBI28063.3| unnamed protein product [Vitis vinifera]
Length = 636
Score = 151 bits (382), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 101/356 (28%), Positives = 173/356 (48%), Gaps = 7/356 (1%)
Query: 130 SVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVF 189
+V S T LM G+ + A+ IF + G RP+ +TY +L +FK +
Sbjct: 70 TVRSRTKLMNILIEKGKPQEAQLIFNSLTEEGHRPTLITYTTLLAALTRQKRFKSIPSLI 129
Query: 190 MTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFE 249
L EK+ LKPD F+ MI + ++G ++A K+F M +RG + +T T+N+L+
Sbjct: 130 SKL---EKNGLKPDSVFFNAMINAFSESGNVKEAMKIFRKMKDRGCKPTTSTFNTLIKGY 186
Query: 250 TNY---KEVSKIYDQM-QRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPT 305
N +E K+ D M Q ++P+ ++ LI A+ +R EA V +M +G++P
Sbjct: 187 GNAGMPEECLKLLDLMSQEENVKPNDRTFNSLIRAWCNKKRITEAWNVVYKMAASGLQPD 246
Query: 306 HKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFR 365
YN L A+A +G +A + M+ +R P+ + +++ Y M+ A +F
Sbjct: 247 VVTYNTLARAYAQNGETSRAEGMILEMQNNRVMPNERTCGIIINGYCKEGKMKDALRFLY 306
Query: 366 RLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNK 425
R++ G PN++ + +LIKG+ + + + + E M G+KP+ F+TIM+A+
Sbjct: 307 RMRNYGVHPNLVIFNSLIKGFLDITDTDGVDEALTLMEEFGVKPDVVTFSTIMNAWSSVG 366
Query: 426 DFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGI 481
D + +M G PD A +IL A E +A LL +P +
Sbjct: 367 LMDKCQEIFDDMVKAGIEPDIHAFSILAKGYVRAGEPEKAESLLTAMGKSGVQPNV 422
Score = 149 bits (375), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 98/402 (24%), Positives = 196/402 (48%), Gaps = 44/402 (10%)
Query: 108 KQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSAL 167
++G +A+ + + + ++G+ P+++++T L+ A R R+K+ ++ +++ +G +P ++
Sbjct: 83 EKGKPQEAQLIFNSLTEEGHRPTLITYTTLLAALTRQKRFKSIPSLISKLEKNGLKPDSV 142
Query: 168 TYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLF 227
+ ++ F E+ KEA ++F + D KP F+ +I Y AG E+ KL
Sbjct: 143 FFNAMINAFSESGNVKEAMKIFRKMKDRG---CKPTTSTFNTLIKGYGNAGMPEECLKLL 199
Query: 228 ALMA-ERGVQQSTVTYNSLMSFETNYKEVSKIYD---QMQRAGLQPDVVSYALLINAYGK 283
LM+ E V+ + T+NSL+ N K +++ ++ +M +GLQPDVV+Y L AY +
Sbjct: 200 DLMSQEENVKPNDRTFNSLIRAWCNKKRITEAWNVVYKMAASGLQPDVVTYNTLARAYAQ 259
Query: 284 ARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISG-MVDQARTVFKCMRRDRCSPDIC 342
A + EM + V P + I+++ + G M D R +++ MR P++
Sbjct: 260 NGETSRAEGMILEMQNNRVMPNERTCGIIINGYCKEGKMKDALRFLYR-MRNYGVHPNLV 318
Query: 343 SYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYD-- 400
+ +++ +++ +D +G ++ +++ G P+V+T+ T++ ++ V ++K EI+D
Sbjct: 319 IFNSLIKGFLDITDTDGVDEALTLMEEFGVKPDVVTFSTIMNAWSSVGLMDKCQEIFDDM 378
Query: 401 ---------------------------------KMRVNGIKPNQTIFTTIMDAYGKNKDF 427
M +G++PN IFTTI+ +
Sbjct: 379 VKAGIEPDIHAFSILAKGYVRAGEPEKAESLLTAMGKSGVQPNVVIFTTIISGWCSAGKM 438
Query: 428 DSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELL 469
+ A Y++M G P+ K L+ A E +A ELL
Sbjct: 439 EYASRVYEKMCEMGICPNLKTFETLIWGYGEAKEPQKAEELL 480
Score = 138 bits (348), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 94/386 (24%), Positives = 173/386 (44%), Gaps = 40/386 (10%)
Query: 97 MDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRR 156
+ + L+ A +Q F ++S + K G P V A++ A+ G K A IFR+
Sbjct: 107 ITYTTLLAALTRQKRFKSIPSLISKLEKNGLKPDSVFFNAMINAFSESGNVKEAMKIFRK 166
Query: 157 MQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKK 216
M+ G +P+ T+ ++K + A +E ++ + EE +KP+ + F+ +I +
Sbjct: 167 MKDRGCKPTTSTFNTLIKGYGNAGMPEECLKLLDLMSQEEN--VKPNDRTFNSLIRAWCN 224
Query: 217 AGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSK---IYDQMQRAGLQPDVVS 273
+A + MA G+Q VTYN+L E S+ + +MQ + P+ +
Sbjct: 225 KKRITEAWNVVYKMAASGLQPDVVTYNTLARAYAQNGETSRAEGMILEMQNNRVMPNERT 284
Query: 274 YALLINAYGKARREEEAL---------------AVFEEMLDA------------------ 300
++IN Y K + ++AL +F ++
Sbjct: 285 CGIIINGYCKEGKMKDALRFLYRMRNYGVHPNLVIFNSLIKGFLDITDTDGVDEALTLME 344
Query: 301 --GVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDME 358
GV+P ++ +++A++ G++D+ + +F M + PDI +++ + YV A + E
Sbjct: 345 EFGVKPDVVTFSTIMNAWSSVGLMDKCQEIFDDMVKAGIEPDIHAFSILAKGYVRAGEPE 404
Query: 359 GAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIM 418
AE + + G PNV+ + T+I G+ +E +Y+KM GI PN F T++
Sbjct: 405 KAESLLTAMGKSGVQPNVVIFTTIISGWCSAGKMEYASRVYEKMCEMGICPNLKTFETLI 464
Query: 419 DAYGKNKDFDSAVVWYKEMESCGFPP 444
YG+ K+ A + ME G P
Sbjct: 465 WGYGEAKEPQKAEELLQIMEQKGVAP 490
Score = 135 bits (339), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 81/327 (24%), Positives = 166/327 (50%), Gaps = 7/327 (2%)
Query: 99 FLMLITAYGKQGDFNKAEKVLSFMNKK-GYAPSVVSHTALMEAYGRGGRYKNAEAIFRRM 157
F LI YG G + K+L M+++ P+ + +L+ A+ R A + +M
Sbjct: 179 FNTLIKGYGNAGMPEECLKLLDLMSQEENVKPNDRTFNSLIRAWCNKKRITEAWNVVYKM 238
Query: 158 QSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKA 217
+SG +P +TY + + + + + AE + +L+ + + + P+++ ++I Y K
Sbjct: 239 AASGLQPDVVTYNTLARAYAQNGETSRAEGM---ILEMQNNRVMPNERTCGIIINGYCKE 295
Query: 218 GGYEKARKLFALMAERGVQQSTVTYNSLMSF---ETNYKEVSKIYDQMQRAGLQPDVVSY 274
G + A + M GV + V +NSL+ T+ V + M+ G++PDVV++
Sbjct: 296 GKMKDALRFLYRMRNYGVHPNLVIFNSLIKGFLDITDTDGVDEALTLMEEFGVKPDVVTF 355
Query: 275 ALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRR 334
+ ++NA+ ++ +F++M+ AG+ P A++IL + +G ++A ++ M +
Sbjct: 356 STIMNAWSSVGLMDKCQEIFDDMVKAGIEPDIHAFSILAKGYVRAGEPEKAESLLTAMGK 415
Query: 335 DRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEK 394
P++ +TT++S + +A ME A + + ++ + G PN+ T+ TLI GY + +K
Sbjct: 416 SGVQPNVVIFTTIISGWCSAGKMEYASRVYEKMCEMGICPNLKTFETLIWGYGEAKEPQK 475
Query: 395 MMEIYDKMRVNGIKPNQTIFTTIMDAY 421
E+ M G+ P ++ + DA+
Sbjct: 476 AEELLQIMEQKGVAPVKSTIQLVADAW 502
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 74/319 (23%), Positives = 144/319 (45%), Gaps = 7/319 (2%)
Query: 172 ILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMA 231
++ + +E K +EA+ +F +L +E +P + ++ + ++ L + +
Sbjct: 77 LMNILIEKGKPQEAQLIFNSLTEEGH---RPTLITYTTLLAALTRQKRFKSIPSLISKLE 133
Query: 232 ERGVQQSTVTYNSLM---SFETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREE 288
+ G++ +V +N+++ S N KE KI+ +M+ G +P ++ LI YG A E
Sbjct: 134 KNGLKPDSVFFNAMINAFSESGNVKEAMKIFRKMKDRGCKPTTSTFNTLIKGYGNAGMPE 193
Query: 289 EALAVFEEM-LDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTM 347
E L + + M + V+P + +N L+ A+ + +A V M PD+ +Y T+
Sbjct: 194 ECLKLLDLMSQEENVKPNDRTFNSLIRAWCNKKRITEAWNVVYKMAASGLQPDVVTYNTL 253
Query: 348 LSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGI 407
AY + AE ++ + +PN T G +I GY K ++ + +MR G+
Sbjct: 254 ARAYAQNGETSRAEGMILEMQNNRVMPNERTCGIIINGYCKEGKMKDALRFLYRMRNYGV 313
Query: 408 KPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANE 467
PN IF +++ + D D ME G PD + +++ + ++ E
Sbjct: 314 HPNLVIFNSLIKGFLDITDTDGVDEALTLMEEFGVKPDVVTFSTIMNAWSSVGLMDKCQE 373
Query: 468 LLGNFNHPNNEPGINGLSI 486
+ + EP I+ SI
Sbjct: 374 IFDDMVKAGIEPDIHAFSI 392
>gi|242046162|ref|XP_002460952.1| hypothetical protein SORBIDRAFT_02g038080 [Sorghum bicolor]
gi|241924329|gb|EER97473.1| hypothetical protein SORBIDRAFT_02g038080 [Sorghum bicolor]
Length = 796
Score = 151 bits (382), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 88/298 (29%), Positives = 164/298 (55%), Gaps = 9/298 (3%)
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAG-GY 220
P P A Y ++ F A +F++A VF ++D ++P +++++++Y K +
Sbjct: 181 PAPDASAYTALVSEFSRAGRFRDAVAVFRRMVD---GGVQPALVTYNVVLHVYSKMSVPW 237
Query: 221 EKARKLFALMAERGVQQSTVTYNSLMSFETN---YKEVSKIYDQMQRAGLQPDVVSYALL 277
++ L M E G++ TYN+L+S Y+E ++++D+M+ AG +PD V++ L
Sbjct: 238 KEVVVLVDSMKEDGIELDRYTYNTLISCCRRRGLYREAAQMFDEMKAAGFEPDKVTFNSL 297
Query: 278 INAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRC 337
++ YGKARR EEA+ V ++M +AG P+ YN L+ A+ G++++A + + M
Sbjct: 298 LDVYGKARRHEEAIGVLKKMENAGCTPSVVTYNSLISAYVKDGLLEEALELKQEMEFRGM 357
Query: 338 SPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMME 397
PD+ +YTT++S ++ A + + ++G PN+ TY LIK + +MM
Sbjct: 358 KPDVVTYTTLISGLDRIGKIDAALATYSEMVRNGCSPNLCTYNALIKMHGVRGKFTEMMI 417
Query: 398 IYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVW-YKEMESCGFPPDQKAKNILLS 454
++D +R G P+ + T++ +G+N DS V +KEM+ G+ P++ L+S
Sbjct: 418 VFDDLRSAGYVPDVVTWNTLLAVFGQN-GLDSEVSGVFKEMKKAGYIPERDTYVSLIS 474
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 84/320 (26%), Positives = 161/320 (50%), Gaps = 6/320 (1%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
LI+ ++G + +A ++ M G+ P V+ +L++ YG+ R++ A + ++M+++G
Sbjct: 262 LISCCRRRGLYREAAQMFDEMKAAGFEPDKVTFNSLLDVYGKARRHEEAIGVLKKMENAG 321
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
PS +TY ++ +V+ +EA E+ + E +KPD + +I + G +
Sbjct: 322 CTPSVVTYNSLISAYVKDGLLEEALELKQEM---EFRGMKPDVVTYTTLISGLDRIGKID 378
Query: 222 KARKLFALMAERGVQQSTVTYNSLMSFET---NYKEVSKIYDQMQRAGLQPDVVSYALLI 278
A ++ M G + TYN+L+ + E+ ++D ++ AG PDVV++ L+
Sbjct: 379 AALATYSEMVRNGCSPNLCTYNALIKMHGVRGKFTEMMIVFDDLRSAGYVPDVVTWNTLL 438
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCS 338
+G+ + E VF+EM AG P Y L+ +++ G+ DQA ++K M
Sbjct: 439 AVFGQNGLDSEVSGVFKEMKKAGYIPERDTYVSLISSYSRCGLFDQAMEIYKRMIEAGIY 498
Query: 339 PDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEI 398
PDI +Y +LSA AEK F ++ P+ ++Y +L+ YA L+KM +
Sbjct: 499 PDISTYNAVLSALARGGRWVQAEKLFAEMEDRDCKPDELSYSSLLHAYANAKKLDKMKAL 558
Query: 399 YDKMRVNGIKPNQTIFTTIM 418
+ + I+P+ + T++
Sbjct: 559 SEDIYAQRIEPHNWLVKTLV 578
Score = 135 bits (339), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 83/360 (23%), Positives = 180/360 (50%), Gaps = 6/360 (1%)
Query: 97 MDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRR 156
+ + LI+ + G + A S M + G +P++ ++ AL++ +G G++ +F
Sbjct: 362 VTYTTLISGLDRIGKIDAALATYSEMVRNGCSPNLCTYNALIKMHGVRGKFTEMMIVFDD 421
Query: 157 MQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKK 216
++S+G P +T+ +L +F + E VF + +K+ P++ + +I Y +
Sbjct: 422 LRSAGYVPDVVTWNTLLAVFGQNGLDSEVSGVFKEM---KKAGYIPERDTYVSLISSYSR 478
Query: 217 AGGYEKARKLFALMAERGVQQSTVTYNSLMSFETN---YKEVSKIYDQMQRAGLQPDVVS 273
G +++A +++ M E G+ TYN+++S + + K++ +M+ +PD +S
Sbjct: 479 CGLFDQAMEIYKRMIEAGIYPDISTYNAVLSALARGGRWVQAEKLFAEMEDRDCKPDELS 538
Query: 274 YALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMR 333
Y+ L++AY A++ ++ A+ E++ + P + L+ + + F+ +R
Sbjct: 539 YSSLLHAYANAKKLDKMKALSEDIYAQRIEPHNWLVKTLVLVNNKVNSLSETEKAFQELR 598
Query: 334 RDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLE 393
R RCS DI M+S Y ++ E+ +K++ + TY +L+ Y+++ + E
Sbjct: 599 RRRCSLDINVLNAMVSIYGKNKMVKKVEEVLTLMKENSINHSAATYNSLMHMYSRLGDCE 658
Query: 394 KMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILL 453
K I +++ +G++P++ + T++ AYG+ A + EM+ G PD NI +
Sbjct: 659 KCEAILTEIKSSGMRPDRYSYNTVIYAYGRKGQMKEASRLFSEMKCSGVKPDIVTYNIFI 718
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 73/258 (28%), Positives = 130/258 (50%), Gaps = 4/258 (1%)
Query: 202 PDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMS----FETNYKEVSK 257
PD + ++ + +AG + A +F M + GVQ + VTYN ++ +KEV
Sbjct: 183 PDASAYTALVSEFSRAGRFRDAVAVFRRMVDGGVQPALVTYNVVLHVYSKMSVPWKEVVV 242
Query: 258 IYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFA 317
+ D M+ G++ D +Y LI+ + EA +F+EM AG P +N LLD +
Sbjct: 243 LVDSMKEDGIELDRYTYNTLISCCRRRGLYREAAQMFDEMKAAGFEPDKVTFNSLLDVYG 302
Query: 318 ISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVI 377
+ ++A V K M C+P + +Y +++SAYV +E A + + ++ G P+V+
Sbjct: 303 KARRHEEAIGVLKKMENAGCTPSVVTYNSLISAYVKDGLLEEALELKQEMEFRGMKPDVV 362
Query: 378 TYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEM 437
TY TLI G ++ ++ + Y +M NG PN + ++ +G F ++ + ++
Sbjct: 363 TYTTLISGLDRIGKIDAALATYSEMVRNGCSPNLCTYNALIKMHGVRGKFTEMMIVFDDL 422
Query: 438 ESCGFPPDQKAKNILLSL 455
S G+ PD N LL++
Sbjct: 423 RSAGYVPDVVTWNTLLAV 440
Score = 118 bits (296), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 84/394 (21%), Positives = 181/394 (45%), Gaps = 9/394 (2%)
Query: 35 MNQIEEVGSAVAVLRSERTRGQPLPKDLVLGTLVRLKQLK-KWNVVSEVLEWLRIQSWWD 93
+++I ++ +A+A SE R P L+++ ++ K+ + V + LR +
Sbjct: 371 LDRIGKIDAALATY-SEMVRNGCSPNLCTYNALIKMHGVRGKFTEMMIVFDDLRSAGYVP 429
Query: 94 FNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAI 153
+ + + L+ +G+ G ++ V M K GY P ++ +L+ +Y R G + A I
Sbjct: 430 -DVVTWNTLLAVFGQNGLDSEVSGVFKEMKKAGYIPERDTYVSLISSYSRCGLFDQAMEI 488
Query: 154 FRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYM 213
++RM +G P TY +L ++ +AE++F + D + KPD+ + +++
Sbjct: 489 YKRMIEAGIYPDISTYNAVLSALARGGRWVQAEKLFAEMEDRD---CKPDELSYSSLLHA 545
Query: 214 YKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFET---NYKEVSKIYDQMQRAGLQPD 270
Y A +K + L + + ++ +L+ + E K + +++R D
Sbjct: 546 YANAKKLDKMKALSEDIYAQRIEPHNWLVKTLVLVNNKVNSLSETEKAFQELRRRRCSLD 605
Query: 271 VVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFK 330
+ +++ YGK + ++ V M + + + YN L+ ++ G ++ +
Sbjct: 606 INVLNAMVSIYGKNKMVKKVEEVLTLMKENSINHSAATYNSLMHMYSRLGDCEKCEAILT 665
Query: 331 CMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVN 390
++ PD SY T++ AY M+ A + F +K G P+++TY IK Y
Sbjct: 666 EIKSSGMRPDRYSYNTVIYAYGRKGQMKEASRLFSEMKCSGVKPDIVTYNIFIKSYVANL 725
Query: 391 NLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKN 424
E+ +++ + G KPN+ + +I++ Y ++
Sbjct: 726 MFEEAIDLVRYLVAQGCKPNERTYNSILEGYCRH 759
>gi|357529169|sp|Q9LMY5.3|PPR41_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At1g13630
Length = 826
Score = 151 bits (382), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 98/375 (26%), Positives = 177/375 (47%), Gaps = 9/375 (2%)
Query: 85 WLRIQSWWDF--NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYG 142
+LR W D + + F +++ Y K G + A+ + K G PSV SH L+
Sbjct: 251 FLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCTVLKCGLVPSVYSHNILINGLC 310
Query: 143 RGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKP 202
G A + M G P ++TY I+ K F A EV +LD+ L P
Sbjct: 311 LVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDK---GLSP 367
Query: 203 DQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLM----SFETNYKEVSKI 258
D + +++ + G + L M RG + +++ S+M E +
Sbjct: 368 DVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSL 427
Query: 259 YDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAI 318
++QM+ GL PD+V+Y+++I+ K + + AL +++EM D + P + + LL
Sbjct: 428 FNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQ 487
Query: 319 SGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVIT 378
GM+ +AR++ + + DI Y ++ Y + +E A + F+ + + G P+V T
Sbjct: 488 KGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVAT 547
Query: 379 YGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEME 438
+ +LI GY K N+ + +I D +++ G+ P+ +TT+MDAY + S +EM+
Sbjct: 548 FNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMK 607
Query: 439 SCGFPPDQKAKNILL 453
+ G PP +++
Sbjct: 608 AEGIPPTNVTYSVIF 622
Score = 119 bits (298), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 87/370 (23%), Positives = 174/370 (47%), Gaps = 21/370 (5%)
Query: 101 MLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSS 160
+L + G + A +V+ M KG +P V+++T L+ + G + + M S
Sbjct: 339 ILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSR 398
Query: 161 G-PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKS-PLKPDQKMFHMMIYMYKKAG 218
G S + ++L + + EA ++L ++ K+ L PD + ++I+ K G
Sbjct: 399 GFELNSIIPCSVMLSGLCKTGRIDEA----LSLFNQMKADGLSPDLVAYSIVIHGLCKLG 454
Query: 219 GYEKARKLFALMAERGVQQSTVTYNSLM---SFETNYKEVSKIYDQMQRAGLQPDVVSYA 275
++ A L+ M ++ + ++ T+ +L+ + E + D + +G D+V Y
Sbjct: 455 KFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYN 514
Query: 276 LLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRD 335
++I+ Y K+ EEAL +F+ +++ G+ P+ +N L+ + + + +AR + ++
Sbjct: 515 IVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLY 574
Query: 336 RCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYA---KVNNL 392
+P + SYTT++ AY N + + ++ R +K +G P +TY + KG K N
Sbjct: 575 GLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENC 634
Query: 393 EKMM--EIYDK-------MRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFP 443
++ I++K M GI P+Q + TI+ + K A V+ + M+S
Sbjct: 635 NHVLRERIFEKCKQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLD 694
Query: 444 PDQKAKNILL 453
NIL+
Sbjct: 695 ASSATYNILI 704
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 79/357 (22%), Positives = 155/357 (43%), Gaps = 18/357 (5%)
Query: 101 MLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSS 160
++++ K G ++A + + M G +P +V+++ ++ + G++ A ++ M
Sbjct: 410 VMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDK 469
Query: 161 GPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGY 220
P++ T+ +L + EA + +L+ ++ D +++++I Y K+G
Sbjct: 470 RILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETL---DIVLYNIVIDGYAKSGCI 526
Query: 221 EKARKLFALMAERGVQQSTVTYNSLM---SFETNYKEVSKIYDQMQRAGLQPDVVSYALL 277
E+A +LF ++ E G+ S T+NSL+ N E KI D ++ GL P VVSY L
Sbjct: 527 EEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTL 586
Query: 278 INAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAI------SGMVDQARTVFKC 331
++AY + + EM G+ PT+ Y+++ V + R KC
Sbjct: 587 MDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKC 646
Query: 332 ------MRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKG 385
M + PD +Y T++ + GA F +K + TY LI
Sbjct: 647 KQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDS 706
Query: 386 YAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGF 442
+ K ++ + ++ +TT++ A+ D + AV + ++ GF
Sbjct: 707 LCVYGYIRKADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMAVKLFHQLLHRGF 763
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 75/363 (20%), Positives = 147/363 (40%), Gaps = 53/363 (14%)
Query: 101 MLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSS 160
++I K G F+ A + M K P+ +H AL+ + G A ++ + SS
Sbjct: 445 IVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISS 504
Query: 161 GPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGY 220
G + Y I++ + ++ +EA E+F +++ + + P F+ +IY Y K
Sbjct: 505 GETLDIVLYNIVIDGYAKSGCIEEALELFKVVIE---TGITPSVATFNSLIYGYCKTQNI 561
Query: 221 EKARKLFALMAERGVQQSTVTYNSLM-----------------------------SFETN 251
+ARK+ ++ G+ S V+Y +LM ++
Sbjct: 562 AEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVI 621
Query: 252 YKEVSK--------------IYDQ-------MQRAGLQPDVVSYALLINAYGKARREEEA 290
+K + + I+++ M+ G+ PD ++Y +I + + A
Sbjct: 622 FKGLCRGWKHENCNHVLRERIFEKCKQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGA 681
Query: 291 LAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSA 350
E M + + YNIL+D+ + G + +A + ++ S +YTT++ A
Sbjct: 682 FVFLEIMKSRNLDASSATYNILIDSLCVYGYIRKADSFIYSLQEQNVSLSKFAYTTLIKA 741
Query: 351 YVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPN 410
+ D E A K F +L GF ++ Y +I + + + + + M GI P+
Sbjct: 742 HCVKGDPEMAVKLFHQLLHRGFNVSIRDYSAVINRLCRRHLVNESKFFFCLMLSQGISPD 801
Query: 411 QTI 413
I
Sbjct: 802 LDI 804
Score = 47.0 bits (110), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 58/260 (22%), Positives = 103/260 (39%), Gaps = 32/260 (12%)
Query: 220 YEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSKIYDQMQRAGLQPDVVSYALLIN 279
+++ R ++A R ST+ + +++ + +KE+ I +Q+ LQ + LL N
Sbjct: 105 FKELRDIYAF---RHSSFSTLLVSHVLAGQRRFKELQVILEQL----LQEEGTLCELLSN 157
Query: 280 AYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSP 339
++ R+ E V++ +L R MVD + + K M+ +
Sbjct: 158 SF---RKWESTGLVWDMLLFLSSRLR---------------MVDDSLYILKKMKDQNLNV 199
Query: 340 DICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIY 399
SY ++L + M ++ +K N TY T++ G + LE +
Sbjct: 200 STQSYNSVLYHFRETDKMWDV---YKEIKD----KNEHTYSTVVDGLCRQQKLEDAVLFL 252
Query: 400 DKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTA 459
I P+ F +IM Y K D A ++ + CG P + NIL++
Sbjct: 253 RTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCTVLKCGLVPSVYSHNILINGLCLV 312
Query: 460 DERNEANELLGNFNHPNNEP 479
EA EL + N EP
Sbjct: 313 GSIAEALELASDMNKHGVEP 332
>gi|222628664|gb|EEE60796.1| hypothetical protein OsJ_14385 [Oryza sativa Japonica Group]
Length = 808
Score = 151 bits (382), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 99/403 (24%), Positives = 197/403 (48%), Gaps = 11/403 (2%)
Query: 58 LPKDLVLGTLVR-LKQLKKWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAE 116
LPK L+ ++++ L ++K+ + +++ + + S + + ++I K +KAE
Sbjct: 166 LPKILICNSIIKELCKMKEMDKAESIVQKM-VDSGIAPDLFTYSLIIDGLCKSKAMDKAE 224
Query: 117 KVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLF 176
+VL M + G P+ +++ +L+ Y G + + +F++M S G P+ +
Sbjct: 225 RVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQMSSCGVIPTVDNCNSFIHAL 284
Query: 177 VEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKA--GGYEKARKLFALMAERG 234
+ + EA+ +F +++ K P KPD + M++ Y A +F LM +G
Sbjct: 285 FKHGRTNEAKCIFDSMV--LKGP-KPDIISYSTMLHGYATATDSCLADVHNIFNLMLTKG 341
Query: 235 VQQSTVTYNSLMSFETNYKEVSK---IYDQMQRAGLQPDVVSYALLINAYGKARREEEAL 291
+ + +N L++ + K I++ MQ G+ PD V++A +I++ + R ++AL
Sbjct: 342 IAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDAL 401
Query: 292 AVFEEMLDAGVRPTHKAYNILLDAFAISG-MVDQARTVFKCMRRDRCSPDICSYTTMLSA 350
F M+D GV P+ Y L+ G +V + + M +D P + ++++++
Sbjct: 402 HKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSIINN 461
Query: 351 YVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPN 410
+ + + Q G PNV+T+ +L++GY V N+E+ + D M GI+PN
Sbjct: 462 LCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPN 521
Query: 411 QTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILL 453
I+ T++D Y KN D A+ +++M G P +I+L
Sbjct: 522 CYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIIL 564
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 97/351 (27%), Positives = 159/351 (45%), Gaps = 47/351 (13%)
Query: 162 PR---PSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAG 218
PR P+ TY I++ + ++ + LL K+ L PD + + IY + K G
Sbjct: 93 PRHSPPTIHTYNILIDCYRRVHRPDLGLAIVGRLL---KNGLGPDDFSYSL-IYGFVKDG 148
Query: 219 GYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSK---IYDQMQRAGLQPDVVSYA 275
+KA LF M E+GV + NS++ KE+ K I +M +G+ PD+ +Y+
Sbjct: 149 EVDKAHCLFLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSGIAPDLFTYS 208
Query: 276 LLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRR- 334
L+I+ K++ ++A V E+M++AG RP YN L+ ++ISGM +++ VFK M
Sbjct: 209 LIIDGLCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQMSSC 268
Query: 335 ------DRCS----------------------------PDICSYTTMLSAYVNASD--ME 358
D C+ PDI SY+TML Y A+D +
Sbjct: 269 GVIPTVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYATATDSCLA 328
Query: 359 GAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIM 418
F + G PN + LI YA+ ++K M I++ M+ G+ P+ F T++
Sbjct: 329 DVHNIFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVI 388
Query: 419 DAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELL 469
+ + D A+ + M G PP + L+ E +A EL+
Sbjct: 389 SSLCRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELI 439
Score = 132 bits (333), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 94/376 (25%), Positives = 170/376 (45%), Gaps = 9/376 (2%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N+ F +LI AY + G +KA + M KG P V+ ++ + R GR +A F
Sbjct: 345 NKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHKF 404
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
M G PS Y +++ + +A+E+ +++++ P P K F +I
Sbjct: 405 NHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPP--PGVKYFSSIINNL 462
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSLM---SFETNYKEVSKIYDQMQRAGLQPDV 271
K G + + + +M + G + + VT+NSLM N +E + D M G++P+
Sbjct: 463 CKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNC 522
Query: 272 VSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKC 331
Y L++ Y K R ++AL VF +ML GV+PT Y+I+L + A+ +F
Sbjct: 523 YIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTAAKKMFHE 582
Query: 332 MRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNN 391
M + I +Y +L + + A +L ++IT+ +I KV
Sbjct: 583 MIESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISAMFKVGR 642
Query: 392 LEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKN- 450
++ E++D + G+ PN ++ ++ K + ++ A + +E G D + N
Sbjct: 643 RQEAKELFDAISTYGLVPNIQTYSMMITNLIKEESYEEADNLFISVEKSGHASDSRLLNH 702
Query: 451 ---ILLSLAKTADERN 463
+LL+ A+ A N
Sbjct: 703 IVRMLLNKAEVAKASN 718
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 83/359 (23%), Positives = 152/359 (42%), Gaps = 7/359 (1%)
Query: 115 AEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILK 174
+ + M KG AP+ L+ AY R G A IF MQ+ G P +T+ ++
Sbjct: 330 VHNIFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVIS 389
Query: 175 LFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERG 234
+ +A F ++D + P + ++ +I G KA++L + M +
Sbjct: 390 SLCRIGRLDDALHKFNHMVD---IGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKD 446
Query: 235 VQQSTVTYNSL----MSFETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEA 290
+ V Y S + E E I D M + G +P+VV++ L+ Y EEA
Sbjct: 447 IPPPGVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEA 506
Query: 291 LAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSA 350
A+ + M G+ P Y L+D + +G +D A TVF+ M P Y+ +L
Sbjct: 507 FALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHG 566
Query: 351 YVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPN 410
A A+K F + + G ++ TYG ++ G + N ++ + +K+ +K +
Sbjct: 567 LFQARRTTAAKKMFHEMIESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFD 626
Query: 411 QTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELL 469
F ++ A K A + + + G P+ + +++++ + EA+ L
Sbjct: 627 IITFNIVISAMFKVGRRQEAKELFDAISTYGLVPNIQTYSMMITNLIKEESYEEADNLF 685
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 102/499 (20%), Positives = 202/499 (40%), Gaps = 50/499 (10%)
Query: 61 DLVLGTLVRLKQLKKWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLS 120
L++ L + K + K VLE + +++ N + + LI Y G +N++ +V
Sbjct: 208 SLIIDGLCKSKAMDK---AERVLEQM-VEAGTRPNSITYNSLIHGYSISGMWNESVRVFK 263
Query: 121 FMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEA- 179
M+ G P+V + + + A + GR A+ IF M GP+P ++Y +L + A
Sbjct: 264 QMSSCGVIPTVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYATAT 323
Query: 180 -NKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQS 238
+ + +F +L + + P++ +F+++I Y + G +KA +F M +G+
Sbjct: 324 DSCLADVHNIFNLMLTKG---IAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPD 380
Query: 239 TVT-----------------------------------YNSLMSFETNYKEVSK----IY 259
TVT Y L+ N+ E+ K I
Sbjct: 381 TVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELIS 440
Query: 260 DQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAIS 319
+ M + P V ++ +IN K R E + + M+ G RP +N L++ + +
Sbjct: 441 EMMNKDIPPPGVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLV 500
Query: 320 GMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITY 379
G +++A + M P+ Y T++ Y ++ A FR + G P + Y
Sbjct: 501 GNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLY 560
Query: 380 GTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMES 439
++ G + +++ +M +G + + ++ +N D A + +++ +
Sbjct: 561 SIILHGLFQARRTTAAKKMFHEMIESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFA 620
Query: 440 CGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGINGLSISVDEEDDDDDDDE 499
D NI++S R EA EL + P I S+ + ++ +E
Sbjct: 621 MNVKFDIITFNIVISAMFKVGRRQEAKELFDAISTYGLVPNIQTYSMMITNLIKEESYEE 680
Query: 500 DDDDNIYHDGDGDGDGDDN 518
DN++ + G D+
Sbjct: 681 --ADNLFISVEKSGHASDS 697
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/239 (23%), Positives = 104/239 (43%), Gaps = 1/239 (0%)
Query: 269 PDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTV 328
P + +Y +LI+ Y + R + LA+ +L G+ P +Y+ L+ F G VD+A +
Sbjct: 98 PTIHTYNILIDCYRRVHRPDLGLAIVGRLLKNGLGPDDFSYS-LIYGFVKDGEVDKAHCL 156
Query: 329 FKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAK 388
F M P I +++ +M+ AE +++ G P++ TY +I G K
Sbjct: 157 FLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSGIAPDLFTYSLIIDGLCK 216
Query: 389 VNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKA 448
++K + ++M G +PN + +++ Y + ++ +V +K+M SCG P
Sbjct: 217 SKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQMSSCGVIPTVDN 276
Query: 449 KNILLSLAKTADERNEANELLGNFNHPNNEPGINGLSISVDEEDDDDDDDEDDDDNIYH 507
N + NEA + + +P I S + D D NI++
Sbjct: 277 CNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYATATDSCLADVHNIFN 335
>gi|334182559|ref|NP_001184987.1| PPR repeat-containing protein [Arabidopsis thaliana]
gi|332190929|gb|AEE29050.1| PPR repeat-containing protein [Arabidopsis thaliana]
Length = 798
Score = 151 bits (382), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 98/375 (26%), Positives = 177/375 (47%), Gaps = 9/375 (2%)
Query: 85 WLRIQSWWDF--NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYG 142
+LR W D + + F +++ Y K G + A+ + K G PSV SH L+
Sbjct: 209 FLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCTVLKCGLVPSVYSHNILINGLC 268
Query: 143 RGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKP 202
G A + M G P ++TY I+ K F A EV +LD+ L P
Sbjct: 269 LVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDK---GLSP 325
Query: 203 DQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLM----SFETNYKEVSKI 258
D + +++ + G + L M RG + +++ S+M E +
Sbjct: 326 DVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSL 385
Query: 259 YDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAI 318
++QM+ GL PD+V+Y+++I+ K + + AL +++EM D + P + + LL
Sbjct: 386 FNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQ 445
Query: 319 SGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVIT 378
GM+ +AR++ + + DI Y ++ Y + +E A + F+ + + G P+V T
Sbjct: 446 KGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVAT 505
Query: 379 YGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEME 438
+ +LI GY K N+ + +I D +++ G+ P+ +TT+MDAY + S +EM+
Sbjct: 506 FNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMK 565
Query: 439 SCGFPPDQKAKNILL 453
+ G PP +++
Sbjct: 566 AEGIPPTNVTYSVIF 580
Score = 119 bits (297), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 87/370 (23%), Positives = 174/370 (47%), Gaps = 21/370 (5%)
Query: 101 MLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSS 160
+L + G + A +V+ M KG +P V+++T L+ + G + + M S
Sbjct: 297 ILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSR 356
Query: 161 G-PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKS-PLKPDQKMFHMMIYMYKKAG 218
G S + ++L + + EA ++L ++ K+ L PD + ++I+ K G
Sbjct: 357 GFELNSIIPCSVMLSGLCKTGRIDEA----LSLFNQMKADGLSPDLVAYSIVIHGLCKLG 412
Query: 219 GYEKARKLFALMAERGVQQSTVTYNSLM---SFETNYKEVSKIYDQMQRAGLQPDVVSYA 275
++ A L+ M ++ + ++ T+ +L+ + E + D + +G D+V Y
Sbjct: 413 KFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYN 472
Query: 276 LLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRD 335
++I+ Y K+ EEAL +F+ +++ G+ P+ +N L+ + + + +AR + ++
Sbjct: 473 IVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLY 532
Query: 336 RCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYA---KVNNL 392
+P + SYTT++ AY N + + ++ R +K +G P +TY + KG K N
Sbjct: 533 GLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENC 592
Query: 393 EKMM--EIYDK-------MRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFP 443
++ I++K M GI P+Q + TI+ + K A V+ + M+S
Sbjct: 593 NHVLRERIFEKCKQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLD 652
Query: 444 PDQKAKNILL 453
NIL+
Sbjct: 653 ASSATYNILI 662
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 79/357 (22%), Positives = 155/357 (43%), Gaps = 18/357 (5%)
Query: 101 MLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSS 160
++++ K G ++A + + M G +P +V+++ ++ + G++ A ++ M
Sbjct: 368 VMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDK 427
Query: 161 GPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGY 220
P++ T+ +L + EA + +L+ ++ D +++++I Y K+G
Sbjct: 428 RILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETL---DIVLYNIVIDGYAKSGCI 484
Query: 221 EKARKLFALMAERGVQQSTVTYNSLM---SFETNYKEVSKIYDQMQRAGLQPDVVSYALL 277
E+A +LF ++ E G+ S T+NSL+ N E KI D ++ GL P VVSY L
Sbjct: 485 EEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTL 544
Query: 278 INAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAI------SGMVDQARTVFKC 331
++AY + + EM G+ PT+ Y+++ V + R KC
Sbjct: 545 MDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKC 604
Query: 332 ------MRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKG 385
M + PD +Y T++ + GA F +K + TY LI
Sbjct: 605 KQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDS 664
Query: 386 YAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGF 442
+ K ++ + ++ +TT++ A+ D + AV + ++ GF
Sbjct: 665 LCVYGYIRKADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMAVKLFHQLLHRGF 721
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 84/407 (20%), Positives = 161/407 (39%), Gaps = 73/407 (17%)
Query: 37 QIEEVGSAVAVLRSERTRGQPLPKDLVLGTLVRLKQLKKWNVVSEVLEWLRIQSWWDFNE 96
Q+ + + +L+ +RG L ++ V L L K + E L FN+
Sbjct: 339 QLGNIDMGLVLLKDMLSRGFELNS--IIPCSVMLSGLCKTGRIDEALSL--------FNQ 388
Query: 97 MD----------FLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGR 146
M + ++I K G F+ A + M K P+ +H AL+ + G
Sbjct: 389 MKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGM 448
Query: 147 YKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKM 206
A ++ + SSG + Y I++ + ++ +EA E+F +++ + + P
Sbjct: 449 LLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIE---TGITPSVAT 505
Query: 207 FHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLM-------------------- 246
F+ +IY Y K +ARK+ ++ G+ S V+Y +LM
Sbjct: 506 FNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMK 565
Query: 247 ---------SFETNYKEVSK--------------IYDQ-------MQRAGLQPDVVSYAL 276
++ +K + + I+++ M+ G+ PD ++Y
Sbjct: 566 AEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQGLRDMESEGIPPDQITYNT 625
Query: 277 LINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDR 336
+I + + A E M + + YNIL+D+ + G + +A + ++
Sbjct: 626 IIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDSLCVYGYIRKADSFIYSLQEQN 685
Query: 337 CSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLI 383
S +YTT++ A+ D E A K F +L GF ++ Y +I
Sbjct: 686 VSLSKFAYTTLIKAHCVKGDPEMAVKLFHQLLHRGFNVSIRDYSAVI 732
Score = 47.8 bits (112), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 55/233 (23%), Positives = 93/233 (39%), Gaps = 18/233 (7%)
Query: 252 YKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEML-DAGV----RPTH 306
+KE+ IY + + +VS+ L RR +E + E++L + G T
Sbjct: 71 FKELRDIY-AFRHSSFSTLLVSHVL-----AGQRRFKELQVILEQLLQEEGTFRKWESTG 124
Query: 307 KAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRR 366
+++LL + MVD + + K M+ + SY ++L + M ++
Sbjct: 125 LVWDMLLFLSSRLRMVDDSLYILKKMKDQNLNVSTQSYNSVLYHFRETDKMWDV---YKE 181
Query: 367 LKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKD 426
+K N TY T++ G + LE + I P+ F +IM Y K
Sbjct: 182 IKD----KNEHTYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGF 237
Query: 427 FDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEP 479
D A ++ + CG P + NIL++ EA EL + N EP
Sbjct: 238 VDMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEP 290
>gi|356528166|ref|XP_003532676.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g02150-like [Glycine max]
Length = 852
Score = 151 bits (382), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 98/384 (25%), Positives = 172/384 (44%), Gaps = 41/384 (10%)
Query: 101 MLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSS 160
M+I ++GD A + M KG P +V++ +L++ YG+ G A ++F M+ +
Sbjct: 256 MVIGCLAREGDLEAARSLFEEMKAKGLRPDIVTYNSLIDGYGKVGMLTGAVSVFEEMKDA 315
Query: 161 GPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGY 220
G P +TY ++ F KF+ + F L ++ L+P+ + +I + KAG
Sbjct: 316 GCEPDVITYNSLINCFC---KFERIPQAFEYLHGMKQRGLQPNVVTYSTLIDAFCKAGML 372
Query: 221 EKARKLFALMAERGVQQSTVTYNSLMSFET---NYKEVSKIYDQMQRAGLQPDVVSYALL 277
+A K F M G+Q + TY SL+ + E K+ +MQ+AG+ ++V+Y L
Sbjct: 373 LEANKFFVDMIRVGLQPNEFTYTSLIDANCKIGDLNEAFKLESEMQQAGVNLNIVTYTAL 432
Query: 278 INAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRC 337
++ + R EA +F +L AG + Y L + + M+++A + + M +
Sbjct: 433 LDGLCEDGRMREAEELFGALLKAGWTLNQQIYTSLFHGYIKAKMMEKAMDILEEMNKKNL 492
Query: 338 SPDI----------------------------CS-------YTTMLSAYVNASDMEGAEK 362
PD+ C YTT++ AY A
Sbjct: 493 KPDLLLYGTKIWGLCRQNEIEDSMAVIREMMDCGLTANSYIYTTLIDAYFKVGKTTEAVN 552
Query: 363 FFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYG 422
+ ++ G V+TYG LI G K+ +++ + +D M NG++PN I+T ++D
Sbjct: 553 LLQEMQDLGIKITVVTYGVLIDGLCKIGLVQQAVRYFDHMTRNGLQPNIMIYTALIDGLC 612
Query: 423 KNKDFDSAVVWYKEMESCGFPPDQ 446
KN + A + EM G PD+
Sbjct: 613 KNDCLEEAKNLFNEMLDKGISPDK 636
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 96/364 (26%), Positives = 171/364 (46%), Gaps = 8/364 (2%)
Query: 110 GDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTY 169
G +A + MNK P V S L+ + + A + F+ M +G PS TY
Sbjct: 195 GMLEEARQCFWKMNKFRVLPKVRSCNELLHRLSKSSKGGLALSFFKDMVVAGLSPSVFTY 254
Query: 170 QIILKLFVEANKFKEAEEVFMTLLDEEKSP-LKPDQKMFHMMIYMYKKAGGYEKARKLFA 228
+++ + A +F +E K+ L+PD ++ +I Y K G A +F
Sbjct: 255 NMVIGCLAREGDLEAARSLF----EEMKAKGLRPDIVTYNSLIDGYGKVGMLTGAVSVFE 310
Query: 229 LMAERGVQQSTVTYNSLMSFETNYKEVSKIYDQ---MQRAGLQPDVVSYALLINAYGKAR 285
M + G + +TYNSL++ ++ + + ++ M++ GLQP+VV+Y+ LI+A+ KA
Sbjct: 311 EMKDAGCEPDVITYNSLINCFCKFERIPQAFEYLHGMKQRGLQPNVVTYSTLIDAFCKAG 370
Query: 286 REEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYT 345
EA F +M+ G++P Y L+DA G +++A + M++ + +I +YT
Sbjct: 371 MLLEANKFFVDMIRVGLQPNEFTYTSLIDANCKIGDLNEAFKLESEMQQAGVNLNIVTYT 430
Query: 346 TMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVN 405
+L M AE+ F L + G+ N Y +L GY K +EK M+I ++M
Sbjct: 431 ALLDGLCEDGRMREAEELFGALLKAGWTLNQQIYTSLFHGYIKAKMMEKAMDILEEMNKK 490
Query: 406 GIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEA 465
+KP+ ++ T + + + + ++ +EM CG + L+ + EA
Sbjct: 491 NLKPDLLLYGTKIWGLCRQNEIEDSMAVIREMMDCGLTANSYIYTTLIDAYFKVGKTTEA 550
Query: 466 NELL 469
LL
Sbjct: 551 VNLL 554
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 98/363 (26%), Positives = 165/363 (45%), Gaps = 13/363 (3%)
Query: 89 QSWWDFNEMDFLMLITAYG----KQGDFNKAEKVLSF---MNKKGYAPSVVSHTALMEAY 141
Q +W N+ L + + + +K LSF M G +PSV ++ ++
Sbjct: 202 QCFWKMNKFRVLPKVRSCNELLHRLSKSSKGGLALSFFKDMVVAGLSPSVFTYNMVIGCL 261
Query: 142 GRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLK 201
R G + A ++F M++ G RP +TY ++ + + A VF + D + +
Sbjct: 262 AREGDLEAARSLFEEMKAKGLRPDIVTYNSLIDGYGKVGMLTGAVSVFEEMKD---AGCE 318
Query: 202 PDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETN---YKEVSKI 258
PD ++ +I + K +A + M +RG+Q + VTY++L+ E +K
Sbjct: 319 PDVITYNSLINCFCKFERIPQAFEYLHGMKQRGLQPNVVTYSTLIDAFCKAGMLLEANKF 378
Query: 259 YDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAI 318
+ M R GLQP+ +Y LI+A K EA + EM AGV Y LLD
Sbjct: 379 FVDMIRVGLQPNEFTYTSLIDANCKIGDLNEAFKLESEMQQAGVNLNIVTYTALLDGLCE 438
Query: 319 SGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVIT 378
G + +A +F + + + + YT++ Y+ A ME A + + P+++
Sbjct: 439 DGRMREAEELFGALLKAGWTLNQQIYTSLFHGYIKAKMMEKAMDILEEMNKKNLKPDLLL 498
Query: 379 YGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEME 438
YGT I G + N +E M + +M G+ N I+TT++DAY K AV +EM+
Sbjct: 499 YGTKIWGLCRQNEIEDSMAVIREMMDCGLTANSYIYTTLIDAYFKVGKTTEAVNLLQEMQ 558
Query: 439 SCG 441
G
Sbjct: 559 DLG 561
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 97/379 (25%), Positives = 174/379 (45%), Gaps = 9/379 (2%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + + LI A+ K G +A K M + G P+ ++T+L++A + G A +
Sbjct: 355 NVVTYSTLIDAFCKAGMLLEANKFFVDMIRVGLQPNEFTYTSLIDANCKIGDLNEAFKLE 414
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
MQ +G + +TY +L E + +EAEE+F LL K+ +Q+++ + + Y
Sbjct: 415 SEMQQAGVNLNIVTYTALLDGLCEDGRMREAEELFGALL---KAGWTLNQQIYTSLFHGY 471
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVS---KIYDQMQRAGLQPDV 271
KA EKA + M ++ ++ + Y + + E+ + +M GL +
Sbjct: 472 IKAKMMEKAMDILEEMNKKNLKPDLLLYGTKIWGLCRQNEIEDSMAVIREMMDCGLTANS 531
Query: 272 VSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKC 331
Y LI+AY K + EA+ + +EM D G++ T Y +L+D G+V QA F
Sbjct: 532 YIYTTLIDAYFKVGKTTEAVNLLQEMQDLGIKITVVTYGVLIDGLCKIGLVQQAVRYFDH 591
Query: 332 MRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNN 391
M R+ P+I YT ++ +E A+ F + G P+ + Y +LI G K N
Sbjct: 592 MTRNGLQPNIMIYTALIDGLCKNDCLEEAKNLFNEMLDKGISPDKLVYTSLIDGNMKHGN 651
Query: 392 LEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNI 451
+ + + ++M G++ + +T+++ + + A EM G PDQ +
Sbjct: 652 PGEALSLRNRMVEIGMELDLCAYTSLIWGFSRYGQVQLAKSLLDEMLRKGIIPDQV---L 708
Query: 452 LLSLAKTADERNEANELLG 470
+ L + E + NE L
Sbjct: 709 CICLLRKYYELGDINEALA 727
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 80/320 (25%), Positives = 148/320 (46%), Gaps = 6/320 (1%)
Query: 163 RPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEK 222
RP + + + V+ +EA + F + K + P + + +++ K+
Sbjct: 178 RPGFGVFDTLFNVLVDLGMLEEARQCFWKM---NKFRVLPKVRSCNELLHRLSKSSKGGL 234
Query: 223 ARKLFALMAERGVQQSTVTYN---SLMSFETNYKEVSKIYDQMQRAGLQPDVVSYALLIN 279
A F M G+ S TYN ++ E + + ++++M+ GL+PD+V+Y LI+
Sbjct: 235 ALSFFKDMVVAGLSPSVFTYNMVIGCLAREGDLEAARSLFEEMKAKGLRPDIVTYNSLID 294
Query: 280 AYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSP 339
YGK A++VFEEM DAG P YN L++ F + QA M++ P
Sbjct: 295 GYGKVGMLTGAVSVFEEMKDAGCEPDVITYNSLINCFCKFERIPQAFEYLHGMKQRGLQP 354
Query: 340 DICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIY 399
++ +Y+T++ A+ A + A KFF + + G PN TY +LI K+ +L + ++
Sbjct: 355 NVVTYSTLIDAFCKAGMLLEANKFFVDMIRVGLQPNEFTYTSLIDANCKIGDLNEAFKLE 414
Query: 400 DKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTA 459
+M+ G+ N +T ++D ++ A + + G+ +Q+ L A
Sbjct: 415 SEMQQAGVNLNIVTYTALLDGLCEDGRMREAEELFGALLKAGWTLNQQIYTSLFHGYIKA 474
Query: 460 DERNEANELLGNFNHPNNEP 479
+A ++L N N +P
Sbjct: 475 KMMEKAMDILEEMNKKNLKP 494
Score = 119 bits (298), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 108/433 (24%), Positives = 195/433 (45%), Gaps = 17/433 (3%)
Query: 16 VEVF---KDAADEAGKKNWRRLMN---QIEEVGSAVAVLRSERTRGQPLPKDLVLGTLVR 69
V VF KDA E + L+N + E + A L + RG P + TL+
Sbjct: 306 VSVFEEMKDAGCEPDVITYNSLINCFCKFERIPQAFEYLHGMKQRGLQ-PNVVTYSTLI- 363
Query: 70 LKQLKKWNVVSEVLEWL--RIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGY 127
K ++ E ++ I+ NE + LI A K GD N+A K+ S M + G
Sbjct: 364 -DAFCKAGMLLEANKFFVDMIRVGLQPNEFTYTSLIDANCKIGDLNEAFKLESEMQQAGV 422
Query: 128 APSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEE 187
++V++TAL++ GR + AE +F + +G L QI LF K K E+
Sbjct: 423 NLNIVTYTALLDGLCEDGRMREAEELFGALLKAG---WTLNQQIYTSLFHGYIKAKMMEK 479
Query: 188 VFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMS 247
L + K LKPD ++ I+ + E + + M + G+ ++ Y +L+
Sbjct: 480 AMDILEEMNKKNLKPDLLLYGTKIWGLCRQNEIEDSMAVIREMMDCGLTANSYIYTTLID 539
Query: 248 --FETN-YKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRP 304
F+ E + +MQ G++ VV+Y +LI+ K ++A+ F+ M G++P
Sbjct: 540 AYFKVGKTTEAVNLLQEMQDLGIKITVVTYGVLIDGLCKIGLVQQAVRYFDHMTRNGLQP 599
Query: 305 THKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFF 364
Y L+D + +++A+ +F M SPD YT+++ + + A
Sbjct: 600 NIMIYTALIDGLCKNDCLEEAKNLFNEMLDKGISPDKLVYTSLIDGNMKHGNPGEALSLR 659
Query: 365 RRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKN 424
R+ + G ++ Y +LI G+++ ++ + D+M GI P+Q + ++ Y +
Sbjct: 660 NRMVEIGMELDLCAYTSLIWGFSRYGQVQLAKSLLDEMLRKGIIPDQVLCICLLRKYYEL 719
Query: 425 KDFDSAVVWYKEM 437
D + A+ + +M
Sbjct: 720 GDINEALALHDDM 732
Score = 118 bits (296), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 79/285 (27%), Positives = 132/285 (46%), Gaps = 3/285 (1%)
Query: 189 FMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLM-- 246
F +L ++ +P +F + + G E+AR+ F M + V + N L+
Sbjct: 166 FFDMLWSTRNVCRPGFGVFDTLFNVLVDLGMLEEARQCFWKMNKFRVLPKVRSCNELLHR 225
Query: 247 -SFETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPT 305
S + + M AGL P V +Y ++I + E A ++FEEM G+RP
Sbjct: 226 LSKSSKGGLALSFFKDMVVAGLSPSVFTYNMVIGCLAREGDLEAARSLFEEMKAKGLRPD 285
Query: 306 HKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFR 365
YN L+D + GM+ A +VF+ M+ C PD+ +Y ++++ + + A ++
Sbjct: 286 IVTYNSLIDGYGKVGMLTGAVSVFEEMKDAGCEPDVITYNSLINCFCKFERIPQAFEYLH 345
Query: 366 RLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNK 425
+KQ G PNV+TY TLI + K L + + + M G++PN+ +T+++DA K
Sbjct: 346 GMKQRGLQPNVVTYSTLIDAFCKAGMLLEANKFFVDMIRVGLQPNEFTYTSLIDANCKIG 405
Query: 426 DFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLG 470
D + A EM+ G + LL EA EL G
Sbjct: 406 DLNEAFKLESEMQQAGVNLNIVTYTALLDGLCEDGRMREAEELFG 450
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 86/188 (45%)
Query: 302 VRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAE 361
RP ++ L + GM+++AR F M + R P + S +L +S A
Sbjct: 177 CRPGFGVFDTLFNVLVDLGMLEEARQCFWKMNKFRVLPKVRSCNELLHRLSKSSKGGLAL 236
Query: 362 KFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAY 421
FF+ + G P+V TY +I A+ +LE ++++M+ G++P+ + +++D Y
Sbjct: 237 SFFKDMVVAGLSPSVFTYNMVIGCLAREGDLEAARSLFEEMKAKGLRPDIVTYNSLIDGY 296
Query: 422 GKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGI 481
GK AV ++EM+ G PD N L++ + +A E L +P +
Sbjct: 297 GKVGMLTGAVSVFEEMKDAGCEPDVITYNSLINCFCKFERIPQAFEYLHGMKQRGLQPNV 356
Query: 482 NGLSISVD 489
S +D
Sbjct: 357 VTYSTLID 364
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 70/311 (22%), Positives = 131/311 (42%), Gaps = 10/311 (3%)
Query: 88 IQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRY 147
+++ W N+ + L Y K KA +L MNKK P ++ + + R
Sbjct: 453 LKAGWTLNQQIYTSLFHGYIKAKMMEKAMDILEEMNKKNLKPDLLLYGTKIWGLCRQNEI 512
Query: 148 KNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDE-EKSPLKPDQKM 206
+++ A+ R M G ++ Y ++ + + K EA + LL E + +K
Sbjct: 513 EDSMAVIREMMDCGLTANSYIYTTLIDAYFKVGKTTEA----VNLLQEMQDLGIKITVVT 568
Query: 207 FHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSL---MSFETNYKEVSKIYDQMQ 263
+ ++I K G ++A + F M G+Q + + Y +L + +E ++++M
Sbjct: 569 YGVLIDGLCKIGLVQQAVRYFDHMTRNGLQPNIMIYTALIDGLCKNDCLEEAKNLFNEML 628
Query: 264 RAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVD 323
G+ PD + Y LI+ K EAL++ M++ G+ AY L+ F+ G V
Sbjct: 629 DKGISPDKLVYTSLIDGNMKHGNPGEALSLRNRMVEIGMELDLCAYTSLIWGFSRYGQVQ 688
Query: 324 QARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNV--ITYGT 381
A+++ M R PD +L Y D+ A + + G + IT +
Sbjct: 689 LAKSLLDEMLRKGIIPDQVLCICLLRKYYELGDINEALALHDDMARRGLISGTIDITVPS 748
Query: 382 LIKGYAKVNNL 392
+ K++ L
Sbjct: 749 CLTAVTKLHKL 759
>gi|242093812|ref|XP_002437396.1| hypothetical protein SORBIDRAFT_10g026180 [Sorghum bicolor]
gi|241915619|gb|EER88763.1| hypothetical protein SORBIDRAFT_10g026180 [Sorghum bicolor]
Length = 786
Score = 151 bits (382), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 106/432 (24%), Positives = 199/432 (46%), Gaps = 13/432 (3%)
Query: 54 RGQPLPKDLVLGTLVRLKQLK-KWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDF 112
R + LP D+ +L++ +L W +L W + D + ++ M++ A G++G
Sbjct: 98 RDELLPADI--PSLLKALELSGHWEWALALLRWAGAEGAADASALE--MVVRALGREGQH 153
Query: 113 NKAEKVLSFMN-KKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQI 171
+ +L M G V ++T ++ A R GRY+ A +F ++ G P+ +TY +
Sbjct: 154 DAVCALLDEMPLPPGSRLDVRAYTTVLHALSRAGRYERAVELFAELRRQGVAPTLVTYNV 213
Query: 172 ILKLFVEANKFKEAEEVFMTLLDEEKSP-LKPDQKMFHMMIYMYKKAGGYEKARKLFALM 230
+L ++ + + + LLDE ++ ++PD +I + G ++A F +
Sbjct: 214 VLDVY---GRMGRSWPRIVALLDEMRAAGVEPDDFTASTVIAACCRDGLVDEAVAFFEDL 270
Query: 231 AERGVQQSTVTYNSLMSF---ETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARRE 287
RG VTYN+L+ NY E ++ +M++ G QPD V+Y L Y +A
Sbjct: 271 KARGHTPCVVTYNALLQVFGKAGNYTEALRVLKEMEQDGCQPDAVTYNELAGTYARAGFY 330
Query: 288 EEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTM 347
EEA + M G+ P YN ++ A+ G VD+A +F M++ C P++ +Y +
Sbjct: 331 EEAAKCLDTMTSKGLLPNAFTYNTVMTAYGNIGKVDEALALFDQMKKSGCVPNVNTYNFI 390
Query: 348 LSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGI 407
L S + + + G PN +T+ T++ K + + + + M+ G+
Sbjct: 391 LGMLGKKSRFTVMLEMLGEMSRSGCTPNRVTWNTMLAVCGKRGMEDYVTRVLEGMKSCGV 450
Query: 408 KPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANE 467
+ ++ + T++ AYG+ +A Y EM S GF P N LL++ + + A
Sbjct: 451 ELSRDTYNTLIAAYGRCGSRTNAFKMYNEMTSAGFAPCLTTYNALLNVLSRQGDWSTAQS 510
Query: 468 LLGNFNHPNNEP 479
++ +P
Sbjct: 511 IVSKMRTKGFKP 522
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 90/384 (23%), Positives = 169/384 (44%), Gaps = 8/384 (2%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
L+ +GK G++ +A +VL M + G P V++ L Y R G Y+ A M S G
Sbjct: 285 LLQVFGKAGNYTEALRVLKEMEQDGCQPDAVTYNELAGTYARAGFYEEAAKCLDTMTSKG 344
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDE-EKSPLKPDQKMFHMMIYMYKKAGGY 220
P+A TY ++ + K EA + L D+ +KS P+ ++ ++ M K +
Sbjct: 345 LLPNAFTYNTVMTAYGNIGKVDEA----LALFDQMKKSGCVPNVNTYNFILGMLGKKSRF 400
Query: 221 EKARKLFALMAERGVQQSTVTYNSLMSFETNYK---EVSKIYDQMQRAGLQPDVVSYALL 277
++ M+ G + VT+N++++ V+++ + M+ G++ +Y L
Sbjct: 401 TVMLEMLGEMSRSGCTPNRVTWNTMLAVCGKRGMEDYVTRVLEGMKSCGVELSRDTYNTL 460
Query: 278 INAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRC 337
I AYG+ A ++ EM AG P YN LL+ + G A+++ MR
Sbjct: 461 IAAYGRCGSRTNAFKMYNEMTSAGFAPCLTTYNALLNVLSRQGDWSTAQSIVSKMRTKGF 520
Query: 338 SPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMME 397
P+ SY+ +L Y ++ G + + + P+ + TL+ K L + +
Sbjct: 521 KPNDQSYSLLLQCYAKGGNIAGIDAIEKEVYGGTVFPSWVILRTLVIANFKCRRLGGIEK 580
Query: 398 IYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAK 457
+ +++ G P+ IF +++ Y KN + + ++ G PD N L+ +
Sbjct: 581 AFQEVKARGYNPDLVIFNSMLSMYAKNGMYSKVTEIFDSIKQSGLSPDLITYNSLMDMYA 640
Query: 458 TADERNEANELLGNFNHPNNEPGI 481
E EA ++L +P +
Sbjct: 641 KCSESWEAEKILNQLKSSQVKPDV 664
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 101/417 (24%), Positives = 186/417 (44%), Gaps = 43/417 (10%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
L Y + G + +A K L M KG P+ ++ +M AYG G+ A A+F +M+ SG
Sbjct: 320 LAGTYARAGFYEEAAKCLDTMTSKGLLPNAFTYNTVMTAYGNIGKVDEALALFDQMKKSG 379
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDE-EKSPLKPDQKMFHMMIYMYKKAGGY 220
P+ TY IL + + ++F V + +L E +S P++ ++ M+ + K G
Sbjct: 380 CVPNVNTYNFILGMLGKKSRFT----VMLEMLGEMSRSGCTPNRVTWNTMLAVCGKRGME 435
Query: 221 EKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVS---KIYDQMQRAGLQPDVVSYALL 277
+ ++ M GV+ S TYN+L++ + K+Y++M AG P + +Y L
Sbjct: 436 DYVTRVLEGMKSCGVELSRDTYNTLIAAYGRCGSRTNAFKMYNEMTSAGFAPCLTTYNAL 495
Query: 278 INAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQA------------ 325
+N + A ++ +M G +P ++Y++LL +A G +
Sbjct: 496 LNVLSRQGDWSTAQSIVSKMRTKGFKPNDQSYSLLLQCYAKGGNIAGIDAIEKEVYGGTV 555
Query: 326 -------RTV----FKCMRRDRC------------SPDICSYTTMLSAYVNASDMEGAEK 362
RT+ FKC R +PD+ + +MLS Y +
Sbjct: 556 FPSWVILRTLVIANFKCRRLGGIEKAFQEVKARGYNPDLVIFNSMLSMYAKNGMYSKVTE 615
Query: 363 FFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYG 422
F +KQ G P++ITY +L+ YAK + + +I ++++ + +KP+ + T+++ +
Sbjct: 616 IFDSIKQSGLSPDLITYNSLMDMYAKCSESWEAEKILNQLKSSQVKPDVVSYNTVINGFC 675
Query: 423 KNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEP 479
K A EM + G P + L+ + + +EA E++ N +P
Sbjct: 676 KQGLIKEAQRILSEMIADGMAPCVVTYHTLVGGYASLEMFSEAREVINYMIQHNLKP 732
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 82/353 (23%), Positives = 161/353 (45%), Gaps = 18/353 (5%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + + ++ GK+G + +VL M G S ++ L+ AYGR G NA ++
Sbjct: 418 NRVTWNTMLAVCGKRGMEDYVTRVLEGMKSCGVELSRDTYNTLIAAYGRCGSRTNAFKMY 477
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
M S+G P TY +L + + A+ + + KP+ + + +++ Y
Sbjct: 478 NEMTSAGFAPCLTTYNALLNVLSRQGDWSTAQSIVSKM---RTKGFKPNDQSYSLLLQCY 534
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFET----NYK-----EVSKIYDQMQRA 265
K G + E+ V TV + S + T N+K + K + +++
Sbjct: 535 AKGGNIAGIDAI-----EKEVYGGTV-FPSWVILRTLVIANFKCRRLGGIEKAFQEVKAR 588
Query: 266 GLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQA 325
G PD+V + +++ Y K + +F+ + +G+ P YN L+D +A +A
Sbjct: 589 GYNPDLVIFNSMLSMYAKNGMYSKVTEIFDSIKQSGLSPDLITYNSLMDMYAKCSESWEA 648
Query: 326 RTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKG 385
+ ++ + PD+ SY T+++ + ++ A++ + DG P V+TY TL+ G
Sbjct: 649 EKILNQLKSSQVKPDVVSYNTVINGFCKQGLIKEAQRILSEMIADGMAPCVVTYHTLVGG 708
Query: 386 YAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEME 438
YA + + E+ + M + +KP + + ++D+Y K K F+ A + E+
Sbjct: 709 YASLEMFSEAREVINYMIQHNLKPMELTYRRVVDSYCKAKRFEEARSFLSEVS 761
>gi|42408237|dbj|BAD09394.1| putative PPR protein [Oryza sativa Japonica Group]
gi|215678545|dbj|BAG92200.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 624
Score = 151 bits (382), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 101/362 (27%), Positives = 171/362 (47%), Gaps = 8/362 (2%)
Query: 114 KAEKVLSFM-NKKGYAP-SVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQI 171
+A +L M + KG P VV++T ++ R G+ A ++F M GP P +TY
Sbjct: 188 QALDLLHIMADHKGRCPLDVVAYTTVINGLLREGQLDKAYSLFDAMLDRGPSPDVVTYSS 247
Query: 172 ILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMA 231
I+ + +A +VF ++ K+ + PD M+ +++ Y +G ++A +F M
Sbjct: 248 IISALSKTQAMDKATQVFTRMV---KNGVMPDCIMYTSLVHGYCSSGKPKEAIGIFKKMC 304
Query: 232 ERGVQQSTVTYNSLMSF---ETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREE 288
GV+ VTY +LM + E KI+D + + G +PD +Y L++ Y
Sbjct: 305 RHGVEPDVVTYTALMDYLCKNGKSTEARKIFDSLVKRGHKPDSTTYGTLLHGYATEGALV 364
Query: 289 EALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTML 348
E + + M+ G++ H +N+++ A+A VD+A VF MR+ +PDI +Y T+L
Sbjct: 365 EMHDLLDLMMKKGMQLGHHIFNMIMGAYAKHNKVDEALLVFSNMRQQGLNPDIVNYGTVL 424
Query: 349 SAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIK 408
A ++ A F LK +G PN++ + TLI G + +K+ E+ +M GI
Sbjct: 425 DILCTAGRVDDALSQFNSLKSEGLAPNIVVFTTLIHGLCTCDKWDKVEELAFEMIDRGIC 484
Query: 409 PNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANEL 468
+ F IM K A + M G P+ N L+ + +EA +L
Sbjct: 485 LDTIFFNAIMGNLCKKGRVIEAKNLFDLMVRIGIEPNTNTYNTLIDGYCLDGKMDEAMKL 544
Query: 469 LG 470
LG
Sbjct: 545 LG 546
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 94/371 (25%), Positives = 170/371 (45%), Gaps = 8/371 (2%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
+I+A K +KA +V + M K G P + +T+L+ Y G+ K A IF++M G
Sbjct: 248 IISALSKTQAMDKATQVFTRMVKNGVMPDCIMYTSLVHGYCSSGKPKEAIGIFKKMCRHG 307
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
P +TY ++ + K EA ++F +L+ K KPD + +++ Y G
Sbjct: 308 VEPDVVTYTALMDYLCKNGKSTEARKIFDSLV---KRGHKPDSTTYGTLLHGYATEGALV 364
Query: 222 KARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSK---IYDQMQRAGLQPDVVSYALLI 278
+ L LM ++G+Q +N +M + +V + ++ M++ GL PD+V+Y ++
Sbjct: 365 EMHDLLDLMMKKGMQLGHHIFNMIMGAYAKHNKVDEALLVFSNMRQQGLNPDIVNYGTVL 424
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTV-FKCMRRDRC 337
+ A R ++AL+ F + G+ P + L+ D+ + F+ + R C
Sbjct: 425 DILCTAGRVDDALSQFNSLKSEGLAPNIVVFTTLIHGLCTCDKWDKVEELAFEMIDRGIC 484
Query: 338 SPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMME 397
D + ++ + A+ F + + G PN TY TLI GY +++ M+
Sbjct: 485 L-DTIFFNAIMGNLCKKGRVIEAKNLFDLMVRIGIEPNTNTYNTLIDGYCLDGKMDEAMK 543
Query: 398 IYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAK 457
+ M NG+KP+ + TI++ Y +N + + +EM+ G P +LL
Sbjct: 544 LLGVMVFNGVKPSDVTYNTIINGYSQNGRIEDGLTLLREMDGKGVNPGIVTYEMLLQGLF 603
Query: 458 TADERNEANEL 468
A A EL
Sbjct: 604 QAGRTVAAKEL 614
Score = 134 bits (338), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 98/357 (27%), Positives = 162/357 (45%), Gaps = 12/357 (3%)
Query: 128 APSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEE 187
AP++ ++ ++ R GR A A R+ ++G R S + + +LK + + +A +
Sbjct: 96 APNIATYGIVIGCCRRLGRLDLAFATVGRVITTGLRMSPILFSPLLKGLCDRRRTSDAMD 155
Query: 188 VFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERG------VQQSTVT 241
+ + + E KPD + +++ ++A L +MA+ V T
Sbjct: 156 IVLRRMPELGC--KPDLFSYTILLKGLCDDKTSQQALDLLHIMADHKGRCPLDVVAYTTV 213
Query: 242 YNSLMSFETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAG 301
N L+ E + ++D M G PDVV+Y+ +I+A K + ++A VF M+ G
Sbjct: 214 INGLLR-EGQLDKAYSLFDAMLDRGPSPDVVTYSSIISALSKTQAMDKATQVFTRMVKNG 272
Query: 302 VRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAE 361
V P Y L+ + SG +A +FK M R PD+ +YT ++ A
Sbjct: 273 VMPDCIMYTSLVHGYCSSGKPKEAIGIFKKMCRHGVEPDVVTYTALMDYLCKNGKSTEAR 332
Query: 362 KFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAY 421
K F L + G P+ TYGTL+ GYA L +M ++ D M G++ IF IM AY
Sbjct: 333 KIFDSLVKRGHKPDSTTYGTLLHGYATEGALVEMHDLLDLMMKKGMQLGHHIFNMIMGAY 392
Query: 422 GKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNE 478
K+ D A++ + M G PD +L + TA ++A L FN +E
Sbjct: 393 AKHNKVDEALLVFSNMRQQGLNPDIVNYGTVLDILCTAGRVDDA---LSQFNSLKSE 446
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 67/346 (19%), Positives = 139/346 (40%), Gaps = 43/346 (12%)
Query: 143 RGGRYK-----NAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEK 197
+GGR + +A +F R+ G R S L A+ A +F +
Sbjct: 34 QGGRQRATEPGDAHQVFDRLLKRGDRASIFDLNRALSDVARASP-AVAISLFNRMPRAGA 92
Query: 198 SPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSK 257
+ P+ + ++I ++ G + A + G++ S + ++ L+ + + S
Sbjct: 93 TSAAPNIATYGIVIGCCRRLGRLDLAFATVGRVITTGLRMSPILFSPLLKGLCDRRRTSD 152
Query: 258 IYD----QMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILL 313
D +M G +PD+ SY +L+ + ++AL + M D HK
Sbjct: 153 AMDIVLRRMPELGCKPDLFSYTILLKGLCDDKTSQQALDLLHIMAD------HKG----- 201
Query: 314 DAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFV 373
RC D+ +YTT+++ + ++ A F + G
Sbjct: 202 ----------------------RCPLDVVAYTTVINGLLREGQLDKAYSLFDAMLDRGPS 239
Query: 374 PNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVW 433
P+V+TY ++I +K ++K +++ +M NG+ P+ ++T+++ Y + A+
Sbjct: 240 PDVVTYSSIISALSKTQAMDKATQVFTRMVKNGVMPDCIMYTSLVHGYCSSGKPKEAIGI 299
Query: 434 YKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEP 479
+K+M G PD L+ + EA ++ + ++P
Sbjct: 300 FKKMCRHGVEPDVVTYTALMDYLCKNGKSTEARKIFDSLVKRGHKP 345
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/108 (25%), Positives = 55/108 (50%)
Query: 86 LRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGG 145
L ++ + N + LI Y G ++A K+L M G PS V++ ++ Y + G
Sbjct: 512 LMVRIGIEPNTNTYNTLIDGYCLDGKMDEAMKLLGVMVFNGVKPSDVTYNTIINGYSQNG 571
Query: 146 RYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLL 193
R ++ + R M G P +TY+++L+ +A + A+E+++ ++
Sbjct: 572 RIEDGLTLLREMDGKGVNPGIVTYEMLLQGLFQAGRTVAAKELYLRMI 619
Score = 43.5 bits (101), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 48/210 (22%), Positives = 81/210 (38%), Gaps = 47/210 (22%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + F LI ++K E++ M +G + A+M + GR A+ +F
Sbjct: 451 NIVVFTTLIHGLCTCDKWDKVEELAFEMIDRGICLDTIFFNAIMGNLCKKGRVIEAKNLF 510
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
M G P+ TY TL+D Y
Sbjct: 511 DLMVRIGIEPNTNTYN--------------------TLIDG------------------Y 532
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSKIYD------QMQRAGLQ 268
G ++A KL +M GV+ S VTYN++++ Y + +I D +M G+
Sbjct: 533 CLDGKMDEAMKLLGVMVFNGVKPSDVTYNTIIN---GYSQNGRIEDGLTLLREMDGKGVN 589
Query: 269 PDVVSYALLINAYGKARREEEALAVFEEML 298
P +V+Y +L+ +A R A ++ M+
Sbjct: 590 PGIVTYEMLLQGLFQAGRTVAAKELYLRMI 619
>gi|410110149|gb|AFV61154.1| pentatricopeptide repeat-containing protein 123, partial
[Xeroaloysia ovatifolia]
Length = 431
Score = 151 bits (382), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 99/374 (26%), Positives = 183/374 (48%), Gaps = 37/374 (9%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
LI K D++KA + S + + G+ P +V++ A++ +G+ ++ A ++ M+++G
Sbjct: 53 LIELSRKLCDYSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMRTAG 112
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
P+ +Y +L ++VE KF EA VF + + E K L D ++MI +Y + G +
Sbjct: 113 VMPNTASYTTLLTMYVENKKFLEALSVF-SEMREIKCLL--DLTTCNIMIDVYGQLGMAK 169
Query: 222 KARKLFALMAERGVQQSTVTYNSLMSFETN---YKEVSKIYDQMQRAGLQPDVVSYALLI 278
+A KLF M + G++ + V+YN+L+ + + E ++ MQR + +VV+Y ++
Sbjct: 170 EADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIVQNVVTYNSMM 229
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCS 338
YGK E+A + +EM + G+ P Y+ ++ + +G +D+A +F+ +R
Sbjct: 230 MIYGKTLEHEKANNLIQEMQNRGIEPNSITYSTIISIWGKAGKLDRAAMLFQKLRSSGVE 289
Query: 339 PDICSYTTMLSAY-------------------------------VNASDMEGAEKFFRRL 367
D Y TM+ AY A +E A FR+
Sbjct: 290 IDQVLYQTMIVAYEKAGLVAHAKRLLHELKSPDNIPRDTAIHILAGAGRIEEATYVFRQA 349
Query: 368 KQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDF 427
G V ++ + +I ++K ++E++DKMR G P+ + +++AYGK +F
Sbjct: 350 IDAGEVRDITVFERMIHLFSKYKKYANVVEVFDKMRGLGYFPDSNVIALVLNAYGKLHEF 409
Query: 428 DSAVVWYKEMESCG 441
D A Y EM+ G
Sbjct: 410 DKANGVYMEMQEVG 423
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 84/318 (26%), Positives = 141/318 (44%), Gaps = 38/318 (11%)
Query: 200 LKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFE---TNYKEVS 256
L PD+ + +I + K G ++ A M + V V Y++L+ +Y +
Sbjct: 8 LSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDYSKAI 67
Query: 257 KIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAF 316
I+ +++R+G PD+V+Y +IN +GKA+ EA ++ EM AGV P +Y LL +
Sbjct: 68 SIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVMPNTASYTTLLTMY 127
Query: 317 AISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNV 376
+ +A +VF MR +C D+ + M+ Y + A+K F +++ G PNV
Sbjct: 128 VENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNV 187
Query: 377 ITYGTLIKGYA----------------------KVNNLEKMMEIYDK------------- 401
++Y TL++ Y V MM IY K
Sbjct: 188 VSYNTLLRVYGDAELFGEAIHLFRLMQRKNIVQNVVTYNSMMMIYGKTLEHEKANNLIQE 247
Query: 402 MRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADE 461
M+ GI+PN ++TI+ +GK D A + ++++ S G DQ ++ + A
Sbjct: 248 MQNRGIEPNSITYSTIISIWGKAGKLDRAAMLFQKLRSSGVEIDQVLYQTMIVAYEKAGL 307
Query: 462 RNEANELLGNFNHPNNEP 479
A LL P+N P
Sbjct: 308 VAHAKRLLHELKSPDNIP 325
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 83/187 (44%)
Query: 295 EEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNA 354
+EM + + P Y+ L+ F G+ D A + + M +DR D+ Y+ ++
Sbjct: 1 DEMRERALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKL 60
Query: 355 SDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIF 414
D A F RLK+ GF P+++ Y +I + K + + +MR G+ PN +
Sbjct: 61 CDYSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVMPNTASY 120
Query: 415 TTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNH 474
TT++ Y +NK F A+ + EM D NI++ + EA++L
Sbjct: 121 TTLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRK 180
Query: 475 PNNEPGI 481
EP +
Sbjct: 181 MGIEPNV 187
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/244 (23%), Positives = 118/244 (48%), Gaps = 6/244 (2%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + + L+ YG F +A + M +K +VV++ ++M YG+ ++ A +
Sbjct: 186 NVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIVQNVVTYNSMMMIYGKTLEHEKANNLI 245
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
+ MQ+ G P+++TY I+ ++ +A K A +F L S ++ DQ ++ MI Y
Sbjct: 246 QEMQNRGIEPNSITYSTIISIWGKAGKLDRAAMLFQKL---RSSGVEIDQVLYQTMIVAY 302
Query: 215 KKAGGYEKARKLFA-LMAERGVQQSTVTYNSLMSFETNYKEVSKIYDQMQRAGLQPDVVS 273
+KAG A++L L + + + T + +++ +E + ++ Q AG D+
Sbjct: 303 EKAGLVAHAKRLLHELKSPDNIPRDTAIH--ILAGAGRIEEATYVFRQAIDAGEVRDITV 360
Query: 274 YALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMR 333
+ +I+ + K ++ + VF++M G P ++L+A+ D+A V+ M+
Sbjct: 361 FERMIHLFSKYKKYANVVEVFDKMRGLGYFPDSNVIALVLNAYGKLHEFDKANGVYMEMQ 420
Query: 334 RDRC 337
C
Sbjct: 421 EVGC 424
>gi|410110091|gb|AFV61125.1| pentatricopeptide repeat-containing protein 123, partial [Lantana
micrantha]
Length = 406
Score = 151 bits (382), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 100/388 (25%), Positives = 188/388 (48%), Gaps = 37/388 (9%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
LI K D++KA + S + + G+ P +V++ A++ +G+ ++ A ++ M+++G
Sbjct: 22 LIELSRKLCDYSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMKTAG 81
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
P+ +Y +L ++VE KF EA VF + + E K L D ++MI +Y + G +
Sbjct: 82 VMPNTTSYSTLLTMYVENKKFLEALSVF-SEMREIKCLL--DLTTCNIMIDVYGQLGMAK 138
Query: 222 KARKLFALMAERGVQQSTVTYNSLMSFETN---YKEVSKIYDQMQRAGLQPDVVSYALLI 278
+A KLF M + G++ + V+YN+L+ + + E ++ MQR ++ +VV+Y +I
Sbjct: 139 EADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMI 198
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCS 338
YGK E+A + +EM G+ P Y+ ++ + G +D+A +F+ +R
Sbjct: 199 MIYGKTLEHEKANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVE 258
Query: 339 PDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVP------------------------ 374
D + TM+ AY A + A++ LK+ +P
Sbjct: 259 IDQILFQTMIVAYERAGLVAHAKRLLHELKRPDNIPRDTAIHILAGAGRIEEATYVFRQA 318
Query: 375 -------NVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDF 427
++ + +I +K ++E++DKMR G P+ + +++AYGK ++F
Sbjct: 319 IDAGEAKDITVFERMIHLLSKYKKYSNVVEVFDKMRGLGYFPDSNVIAVVLNAYGKLQEF 378
Query: 428 DSAVVWYKEMESCGFPPDQKAKNILLSL 455
D A Y EM+ G + +LSL
Sbjct: 379 DKANDVYMEMQEVGCVFSDEVHFQMLSL 406
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 78/287 (27%), Positives = 139/287 (48%), Gaps = 3/287 (1%)
Query: 196 EKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSF---ETNY 252
E+ + D ++ +I + +K Y KA +F+ + G V YN++++ +
Sbjct: 8 EQDQVPGDLVLYSNLIELSRKLCDYSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLF 67
Query: 253 KEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNIL 312
+E + +M+ AG+ P+ SY+ L+ Y + ++ EAL+VF EM + NI+
Sbjct: 68 REARSLISEMKTAGVMPNTTSYSTLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIM 127
Query: 313 LDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGF 372
+D + GM +A +F MR+ P++ SY T+L Y +A A FR +++
Sbjct: 128 IDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNI 187
Query: 373 VPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVV 432
NV+TY ++I Y K EK + +M+ GI+PN ++TI+ +GK D A +
Sbjct: 188 EQNVVTYNSMIMIYGKTLEHEKANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAM 247
Query: 433 WYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEP 479
++++ S G DQ ++ + A A LL P+N P
Sbjct: 248 LFQKLRSSGVEIDQILFQTMIVAYERAGLVAHAKRLLHELKRPDNIP 294
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/244 (23%), Positives = 115/244 (47%), Gaps = 6/244 (2%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + + L+ YG F +A + M +K +VV++ +++ YG+ ++ A +
Sbjct: 155 NVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMIMIYGKTLEHEKANNLI 214
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
+ MQS G P+++TY I+ ++ + K A +F L S ++ DQ +F MI Y
Sbjct: 215 QEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKL---RSSGVEIDQILFQTMIVAY 271
Query: 215 KKAGGYEKARKLFA-LMAERGVQQSTVTYNSLMSFETNYKEVSKIYDQMQRAGLQPDVVS 273
++AG A++L L + + T + +++ +E + ++ Q AG D+
Sbjct: 272 ERAGLVAHAKRLLHELKRPDNIPRDTAIH--ILAGAGRIEEATYVFRQAIDAGEAKDITV 329
Query: 274 YALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMR 333
+ +I+ K ++ + VF++M G P ++L+A+ D+A V+ M+
Sbjct: 330 FERMIHLLSKYKKYSNVVEVFDKMRGLGYFPDSNVIAVVLNAYGKLQEFDKANDVYMEMQ 389
Query: 334 RDRC 337
C
Sbjct: 390 EVGC 393
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 37/150 (24%), Positives = 67/150 (44%)
Query: 332 MRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNN 391
M +D+ D+ Y+ ++ D A F RLK+ GF P+++ Y +I + K
Sbjct: 7 MEQDQVPGDLVLYSNLIELSRKLCDYSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKL 66
Query: 392 LEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNI 451
+ + +M+ G+ PN T ++T++ Y +NK F A+ + EM D NI
Sbjct: 67 FREARSLISEMKTAGVMPNTTSYSTLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNI 126
Query: 452 LLSLAKTADERNEANELLGNFNHPNNEPGI 481
++ + EA++L EP +
Sbjct: 127 MIDVYGQLGMAKEADKLFWGMRKMGIEPNV 156
Score = 46.6 bits (109), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 21/93 (22%), Positives = 51/93 (54%)
Query: 363 FFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYG 422
+ ++++QD +++ Y LI+ K+ + K + I+ +++ +G P+ + +++ +G
Sbjct: 3 WLQKMEQDQVPGDLVLYSNLIELSRKLCDYSKAISIFSRLKRSGFTPDLVAYNAMINVFG 62
Query: 423 KNKDFDSAVVWYKEMESCGFPPDQKAKNILLSL 455
K K F A EM++ G P+ + + LL++
Sbjct: 63 KAKLFREARSLISEMKTAGVMPNTTSYSTLLTM 95
>gi|255661162|gb|ACU25750.1| pentatricopeptide repeat-containing protein [Glandularia flava]
Length = 426
Score = 151 bits (382), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 97/374 (25%), Positives = 183/374 (48%), Gaps = 37/374 (9%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
LI K D++KA + S + + G+ P +V++ A++ +G+ ++ A ++ M+++G
Sbjct: 50 LIELSRKLCDYSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMRTAG 109
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
P+ +Y +L ++VE KF EA VF + E K L D ++MI +Y + G +
Sbjct: 110 VTPNTASYSTLLTMYVENKKFLEALSVFAEM-REIKCLL--DLTTCNIMIDVYGQLGMAK 166
Query: 222 KARKLFALMAERGVQQSTVTYNSLMSFETN---YKEVSKIYDQMQRAGLQPDVVSYALLI 278
+A KLF M + G++ + V+YN+L+ + + E ++ MQR ++ +VV+Y ++
Sbjct: 167 EADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMM 226
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCS 338
YGK E+A + +EM + G+ P Y+ ++ + G +D+A +F+ +R
Sbjct: 227 MIYGKTLEHEKANNLIQEMQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVD 286
Query: 339 PDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVP------------------------ 374
D Y TM+ AY A + A++ LK+ +P
Sbjct: 287 IDQVLYQTMIVAYERAGLVAHAKRLLHELKRPDNIPRDIAIHILAGAGRXEEATWVFRQA 346
Query: 375 -------NVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDF 427
++ + +I ++K ++E++DKMR G P+ + +++AYGK +F
Sbjct: 347 IDAGEVKDITVFERMIHLFSKYKKYGNVVEVFDKMRGLGYFPDSNVIALVLNAYGKLHEF 406
Query: 428 DSAVVWYKEMESCG 441
D A Y EM+ G
Sbjct: 407 DKANDVYMEMQEVG 420
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 85/318 (26%), Positives = 146/318 (45%), Gaps = 38/318 (11%)
Query: 200 LKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFE---TNYKEVS 256
L PD+ + +I + K G ++ A M + V V Y++L+ +Y +
Sbjct: 5 LSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDYSKAI 64
Query: 257 KIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAF 316
I+ +++R+G PD+V+Y +IN +GKA+ EA ++ EM AGV P +Y+ LL +
Sbjct: 65 SIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVTPNTASYSTLLTMY 124
Query: 317 AISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNV 376
+ +A +VF MR +C D+ + M+ Y + A+K F +++ G PNV
Sbjct: 125 VENKKFLEALSVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNV 184
Query: 377 ITYGTLIKGYA---------------KVNNLEK-------MMEIYDK------------- 401
++Y TL++ Y + N+E+ MM IY K
Sbjct: 185 VSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLIQE 244
Query: 402 MRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADE 461
M+ GI+PN ++TI+ +GK D A + ++++ S G DQ ++ + A
Sbjct: 245 MQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVDIDQVLYQTMIVAYERAGL 304
Query: 462 RNEANELLGNFNHPNNEP 479
A LL P+N P
Sbjct: 305 VAHAKRLLHELKRPDNIP 322
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 45/181 (24%), Positives = 79/181 (43%)
Query: 301 GVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGA 360
+ P Y+ L+ F G+ D A + + M +DR D+ Y+ ++ D A
Sbjct: 4 ALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDYSKA 63
Query: 361 EKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDA 420
F RLK+ GF P+++ Y +I + K + + +MR G+ PN ++T++
Sbjct: 64 ISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVTPNTASYSTLLTM 123
Query: 421 YGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPG 480
Y +NK F A+ + EM D NI++ + EA++L EP
Sbjct: 124 YVENKKFLEALSVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPN 183
Query: 481 I 481
+
Sbjct: 184 V 184
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/244 (22%), Positives = 114/244 (46%), Gaps = 6/244 (2%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + + L+ YG F +A + M +K +VV++ ++M YG+ ++ A +
Sbjct: 183 NVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLI 242
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
+ MQ+ G P+++TY I+ ++ + K A +F L S + DQ ++ MI Y
Sbjct: 243 QEMQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKL---RSSGVDIDQVLYQTMIVAY 299
Query: 215 KKAGGYEKARKLFA-LMAERGVQQSTVTYNSLMSFETNYKEVSKIYDQMQRAGLQPDVVS 273
++AG A++L L + + + +++ +E + ++ Q AG D+
Sbjct: 300 ERAGLVAHAKRLLHELKRPDNIPRDIAIH--ILAGAGRXEEATWVFRQAIDAGEVKDITV 357
Query: 274 YALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMR 333
+ +I+ + K ++ + VF++M G P ++L+A+ D+A V+ M+
Sbjct: 358 FERMIHLFSKYKKYGNVVEVFDKMRGLGYFPDSNVIALVLNAYGKLHEFDKANDVYMEMQ 417
Query: 334 RDRC 337
C
Sbjct: 418 EVGC 421
Score = 58.5 bits (140), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 28/123 (22%), Positives = 64/123 (52%)
Query: 333 RRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNL 392
R SPD +Y+T+++ + + A + ++++QD +++ Y LI+ K+ +
Sbjct: 1 RERALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDY 60
Query: 393 EKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNIL 452
K + I+ +++ +G P+ + +++ +GK K F A EM + G P+ + + L
Sbjct: 61 SKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVTPNTASYSTL 120
Query: 453 LSL 455
L++
Sbjct: 121 LTM 123
>gi|334182516|ref|NP_172730.3| helicase domain and pentatricopeptide repeat-containing protein
[Arabidopsis thaliana]
gi|332190794|gb|AEE28915.1| helicase domain and pentatricopeptide repeat-containing protein
[Arabidopsis thaliana]
Length = 735
Score = 151 bits (382), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 93/399 (23%), Positives = 187/399 (46%), Gaps = 41/399 (10%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
++ + GD + A +L M ++ V +++ ++++ R G A ++F+ M++ G
Sbjct: 199 IVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKG 258
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
+ S +TY +++ +A K+ + + ++ E + P+ F++++ ++ K G +
Sbjct: 259 IKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSRE---IVPNVITFNVLLDVFVKEGKLQ 315
Query: 222 KARKLFALMAERGVQQSTVTYNSLM---SFETNYKEVSKIYDQMQRAGLQPDVVSYALLI 278
+A +L+ M RG+ + +TYN+LM + E + + D M R PD+V++ LI
Sbjct: 316 EANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLI 375
Query: 279 NAYGKARREEEALAVF-----------------------------------EEMLDAGVR 303
Y +R ++ + VF +EM+ GV
Sbjct: 376 KGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVL 435
Query: 304 PTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKF 363
P Y ILLD +G +++A +F+ +++ + I YTT++ +E A
Sbjct: 436 PDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNL 495
Query: 364 FRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGK 423
F L G PNV+TY +I G K +L + + KM +G PN + T++ A+ +
Sbjct: 496 FCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLR 555
Query: 424 NKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADER 462
+ D ++ +EM+SCGF D + +++ + +A +R
Sbjct: 556 DGDLTASAKLIEEMKSCGFSADASSIKMVIDMLLSAMKR 594
Score = 138 bits (347), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 105/475 (22%), Positives = 205/475 (43%), Gaps = 44/475 (9%)
Query: 44 AVAVLRSERTRGQPLPKDLVLGTLVR-LKQLKKWNVVSEVLEWLRIQSWWDFNEMDFLML 102
A+A+ + E R +PLP + + + K++N+V + + L + N ++
Sbjct: 72 AIALFQ-EMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAH-NIYTLNIM 129
Query: 103 ITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGP 162
I + + A VL + K GY P + L++ G+ A + RM +G
Sbjct: 130 INCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGC 189
Query: 163 RPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEK 222
+P +TY I+ + A ++ + E+ +K D + +I + G +
Sbjct: 190 QPDVVTYNSIVNGICRSGDTSLALDLLRKM---EERNVKADVFTYSTIIDSLCRDGCIDA 246
Query: 223 ARKLFALMAERGVQQSTVTYNSL---MSFETNYKEVSKIYDQMQRAGLQPDVVSYALLIN 279
A LF M +G++ S VTYNSL + + + + + M + P+V+++ +L++
Sbjct: 247 AISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLD 306
Query: 280 AYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSP 339
+ K + +EA +++EM+ G+ P YN L+D + + + +A + M R++CSP
Sbjct: 307 VFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSP 366
Query: 340 DICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFV-------------------------- 373
DI ++T+++ Y ++ K FR + + G V
Sbjct: 367 DIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELF 426
Query: 374 ---------PNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKN 424
P+V+TYG L+ G LEK +EI++ ++ + + ++TTI++ K
Sbjct: 427 QEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKG 486
Query: 425 KDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEP 479
+ A + + G P+ +++S +EAN LL N P
Sbjct: 487 GKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAP 541
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 71/336 (21%), Positives = 158/336 (47%), Gaps = 9/336 (2%)
Query: 41 VGSAVAVLRSERTRGQPLPKDLVLGTLVR-LKQLKKWNVVSEVLEWLRIQSWWDFNEMDF 99
+ +A+++ + T+G + +LVR L + KWN + +L+ + + N + F
Sbjct: 244 IDAAISLFKEMETKGIK-SSVVTYNSLVRGLCKAGKWNDGALLLKDM-VSREIVPNVITF 301
Query: 100 LMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQS 159
+L+ + K+G +A ++ M +G +P+++++ LM+ Y R A + M
Sbjct: 302 NVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVR 361
Query: 160 SGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGG 219
+ P +T+ ++K + + + +VF + K L + + +++ + ++G
Sbjct: 362 NKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNI---SKRGLVANAVTYSILVQGFCQSGK 418
Query: 220 YEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSK---IYDQMQRAGLQPDVVSYAL 276
+ A +LF M GV +TY L+ + ++ K I++ +Q++ + +V Y
Sbjct: 419 IKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTT 478
Query: 277 LINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDR 336
+I K + E+A +F + GV+P Y +++ G + +A + + M D
Sbjct: 479 IIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDG 538
Query: 337 CSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGF 372
+P+ C+Y T++ A++ D+ + K +K GF
Sbjct: 539 NAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGF 574
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/232 (18%), Positives = 103/232 (44%)
Query: 258 IYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFA 317
++ +M R+ P +V ++ +A + ++ L +++ G+ NI+++ F
Sbjct: 75 LFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIMINCFC 134
Query: 318 ISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVI 377
A +V + + PD ++ T++ + A R+ ++G P+V+
Sbjct: 135 RCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVV 194
Query: 378 TYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEM 437
TY +++ G + + +++ KM +K + ++TI+D+ ++ D+A+ +KEM
Sbjct: 195 TYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEM 254
Query: 438 ESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGINGLSISVD 489
E+ G N L+ A + N+ LL + P + ++ +D
Sbjct: 255 ETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLD 306
Score = 41.2 bits (95), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 21/87 (24%), Positives = 45/87 (51%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N M + ++I+ K+G ++A +L M + G AP+ ++ L+ A+ R G + +
Sbjct: 507 NVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLI 566
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANK 181
M+S G A + ++++ + + A K
Sbjct: 567 EEMKSCGFSADASSIKMVIDMLLSAMK 593
>gi|255661136|gb|ACU25737.1| pentatricopeptide repeat-containing protein [Verbena macdougalii]
Length = 426
Score = 151 bits (382), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 100/374 (26%), Positives = 183/374 (48%), Gaps = 37/374 (9%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
LI K D++KA + S + + G+ P +V++ A++ +G+ ++ A ++ M+++G
Sbjct: 50 LIELSRKLCDYSKAISIFSRLKRSGFTPDIVAYNAMINVFGKAKLFREARSLISEMRTAG 109
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
P+ +Y +L ++VE KF EA VF + E K L D ++MI +Y + G +
Sbjct: 110 VTPNTASYSTLLTMYVENKKFLEALSVFAEM-REIKCLL--DLTTCNIMIDVYGQLGMAK 166
Query: 222 KARKLFALMAERGVQQSTVTYNSLMSFETN---YKEVSKIYDQMQRAGLQPDVVSYALLI 278
+A KLF M + G++ + V+YN+L+ + + E ++ MQR ++ +VV+Y ++
Sbjct: 167 EADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMM 226
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCS 338
YGK E+A + +EM + G+ P Y+ ++ ++ G +D+A +F+ +R
Sbjct: 227 MIYGKTLEHEKANNLIQEMQNRGIEPNSITYSTIISIWSKVGKLDRAAMLFQKLRSSGVD 286
Query: 339 PDICSYTTMLSAY-------------------------------VNASDMEGAEKFFRRL 367
D Y TM+ AY V A +E A FR+
Sbjct: 287 IDQVLYQTMIVAYEKAGLVAHAKRLLHELKRPDNIPRDIAIHILVGAGRIEEATWVFRQA 346
Query: 368 KQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDF 427
G V ++ + +I ++K ++E++DKM G P+ + I++AYGK +F
Sbjct: 347 IDAGEVKDITVFERMIHLFSKYKKYGNVVEVFDKMCGLGYFPDSNVIALILNAYGKLHEF 406
Query: 428 DSAVVWYKEMESCG 441
D A Y EM+ G
Sbjct: 407 DKANDVYMEMQEVG 420
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 82/319 (25%), Positives = 153/319 (47%), Gaps = 6/319 (1%)
Query: 164 PSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKA 223
P TY ++ F + F +A ++ +++++ P D ++ +I + +K Y KA
Sbjct: 7 PDRYTYSTLITHFGKEGLF-DAALSWLQKMEQDRVP--GDLVLYSNLIELSRKLCDYSKA 63
Query: 224 RKLFALMAERGVQQSTVTYNSLMSF---ETNYKEVSKIYDQMQRAGLQPDVVSYALLINA 280
+F+ + G V YN++++ ++E + +M+ AG+ P+ SY+ L+
Sbjct: 64 ISIFSRLKRSGFTPDIVAYNAMINVFGKAKLFREARSLISEMRTAGVTPNTASYSTLLTM 123
Query: 281 YGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPD 340
Y + ++ EAL+VF EM + NI++D + GM +A +F MR+ P+
Sbjct: 124 YVENKKFLEALSVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPN 183
Query: 341 ICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYD 400
+ SY T+L Y +A A FR +++ NV+TY +++ Y K EK +
Sbjct: 184 VVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLIQ 243
Query: 401 KMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTAD 460
+M+ GI+PN ++TI+ + K D A + ++++ S G DQ ++ + A
Sbjct: 244 EMQNRGIEPNSITYSTIISIWSKVGKLDRAAMLFQKLRSSGVDIDQVLYQTMIVAYEKAG 303
Query: 461 ERNEANELLGNFNHPNNEP 479
A LL P+N P
Sbjct: 304 LVAHAKRLLHELKRPDNIP 322
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 80/346 (23%), Positives = 168/346 (48%), Gaps = 10/346 (2%)
Query: 124 KKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFK 183
++ +P +++ L+ +G+ G + A + ++M+ + Y +++L + +
Sbjct: 2 ERALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDYS 61
Query: 184 EAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYN 243
+A +F L ++S PD ++ MI ++ KA + +AR L + M GV +T +Y+
Sbjct: 62 KAISIFSRL---KRSGFTPDIVAYNAMINVFGKAKLFREARSLISEMRTAGVTPNTASYS 118
Query: 244 SLMSFETNYK---EVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDA 300
+L++ K E ++ +M+ D+ + ++I+ YG+ +EA +F M
Sbjct: 119 TLLTMYVENKKFLEALSVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKM 178
Query: 301 GVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGA 360
G+ P +YN LL + + + +A +F+ M+R ++ +Y +M+ Y + E A
Sbjct: 179 GIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKA 238
Query: 361 EKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDA 420
+ ++ G PN ITY T+I ++KV L++ ++ K+R +G+ +Q ++ T++ A
Sbjct: 239 NNLIQEMQNRGIEPNSITYSTIISIWSKVGKLDRAAMLFQKLRSSGVDIDQVLYQTMIVA 298
Query: 421 YGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEAN 466
Y K A E++ PD ++I + + A EA
Sbjct: 299 YEKAGLVAHAKRLLHELKR----PDNIPRDIAIHILVGAGRIEEAT 340
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 45/181 (24%), Positives = 79/181 (43%)
Query: 301 GVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGA 360
+ P Y+ L+ F G+ D A + + M +DR D+ Y+ ++ D A
Sbjct: 4 ALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDYSKA 63
Query: 361 EKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDA 420
F RLK+ GF P+++ Y +I + K + + +MR G+ PN ++T++
Sbjct: 64 ISIFSRLKRSGFTPDIVAYNAMINVFGKAKLFREARSLISEMRTAGVTPNTASYSTLLTM 123
Query: 421 YGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPG 480
Y +NK F A+ + EM D NI++ + EA++L EP
Sbjct: 124 YVENKKFLEALSVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPN 183
Query: 481 I 481
+
Sbjct: 184 V 184
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/243 (23%), Positives = 112/243 (46%), Gaps = 4/243 (1%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + + L+ YG F +A + M +K +VV++ ++M YG+ ++ A +
Sbjct: 183 NVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLI 242
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
+ MQ+ G P+++TY I+ ++ + K A +F L S + DQ ++ MI Y
Sbjct: 243 QEMQNRGIEPNSITYSTIISIWSKVGKLDRAAMLFQKL---RSSGVDIDQVLYQTMIVAY 299
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSKIYDQMQRAGLQPDVVSY 274
+KAG A++L + + + L+ +E + ++ Q AG D+ +
Sbjct: 300 EKAGLVAHAKRLLHELKRPDNIPRDIAIHILVG-AGRIEEATWVFRQAIDAGEVKDITVF 358
Query: 275 ALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRR 334
+I+ + K ++ + VF++M G P ++L+A+ D+A V+ M+
Sbjct: 359 ERMIHLFSKYKKYGNVVEVFDKMCGLGYFPDSNVIALILNAYGKLHEFDKANDVYMEMQE 418
Query: 335 DRC 337
C
Sbjct: 419 VGC 421
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/123 (22%), Positives = 64/123 (52%)
Query: 333 RRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNL 392
R SPD +Y+T+++ + + A + ++++QD +++ Y LI+ K+ +
Sbjct: 1 RERALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDY 60
Query: 393 EKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNIL 452
K + I+ +++ +G P+ + +++ +GK K F A EM + G P+ + + L
Sbjct: 61 SKAISIFSRLKRSGFTPDIVAYNAMINVFGKAKLFREARSLISEMRTAGVTPNTASYSTL 120
Query: 453 LSL 455
L++
Sbjct: 121 LTM 123
>gi|218194637|gb|EEC77064.1| hypothetical protein OsI_15455 [Oryza sativa Indica Group]
Length = 864
Score = 151 bits (382), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 99/403 (24%), Positives = 197/403 (48%), Gaps = 11/403 (2%)
Query: 58 LPKDLVLGTLVR-LKQLKKWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAE 116
LPK L+ ++++ L ++K+ + +++ + + S + + ++I K +KAE
Sbjct: 222 LPKILICNSIIKELCKMKEMDKAESIVQKM-VDSGIAPDLFTYSLIIDGLCKSKAMDKAE 280
Query: 117 KVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLF 176
+VL M + G P+ +++ +L+ Y G + + +F++M S G P+ +
Sbjct: 281 RVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQMSSCGVIPTVDNCNSFIHAL 340
Query: 177 VEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKA--GGYEKARKLFALMAERG 234
+ + EA+ +F +++ K P KPD + M++ Y A +F LM +G
Sbjct: 341 FKHGRTNEAKCIFDSMV--LKGP-KPDIISYSTMLHGYATATDSCLADVHNIFNLMLTKG 397
Query: 235 VQQSTVTYNSLMSFETNYKEVSK---IYDQMQRAGLQPDVVSYALLINAYGKARREEEAL 291
+ + +N L++ + K I++ MQ G+ PD V++A +I++ + R ++AL
Sbjct: 398 IAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDAL 457
Query: 292 AVFEEMLDAGVRPTHKAYNILLDAFAISG-MVDQARTVFKCMRRDRCSPDICSYTTMLSA 350
F M+D GV P+ Y L+ G +V + + M +D P + ++++++
Sbjct: 458 HKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSIINN 517
Query: 351 YVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPN 410
+ + + Q G PNV+T+ +L++GY V N+E+ + D M GI+PN
Sbjct: 518 LCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPN 577
Query: 411 QTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILL 453
I+ T++D Y KN D A+ +++M G P +I+L
Sbjct: 578 CYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIIL 620
Score = 138 bits (348), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 100/361 (27%), Positives = 165/361 (45%), Gaps = 48/361 (13%)
Query: 153 IFRRMQS-SGPR---PSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFH 208
+F+RM + PR P+ TY I++ + ++ + LL K+ L PD +
Sbjct: 139 LFKRMDRWACPRHSPPTIHTYNILIDCYRRVHRPDLGLAIVGRLL---KNGLGPDDFSYS 195
Query: 209 MMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSK---IYDQMQRA 265
+ IY + K G +KA LF M E+GV + NS++ KE+ K I +M +
Sbjct: 196 L-IYGFVKDGEVDKAHCLFLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDS 254
Query: 266 GLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQA 325
G+ PD+ +Y+L+I+ K++ ++A V E+M++AG RP YN L+ ++ISGM +++
Sbjct: 255 GIAPDLFTYSLIIDGLCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNES 314
Query: 326 RTVFKCMRR-------DRCS----------------------------PDICSYTTMLSA 350
VFK M D C+ PDI SY+TML
Sbjct: 315 VRVFKQMSSCGVIPTVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHG 374
Query: 351 YVNASD--MEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIK 408
Y A+D + F + G PN + LI YA+ ++K M I++ M+ G+
Sbjct: 375 YATATDSCLADVHNIFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMI 434
Query: 409 PNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANEL 468
P+ F T++ + + D A+ + M G PP + L+ E +A EL
Sbjct: 435 PDTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKEL 494
Query: 469 L 469
+
Sbjct: 495 I 495
Score = 132 bits (331), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 94/376 (25%), Positives = 170/376 (45%), Gaps = 9/376 (2%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N+ F +LI AY + G +KA + M KG P V+ ++ + R GR +A F
Sbjct: 401 NKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHKF 460
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
M G PS Y +++ + +A+E+ +++++ P P K F +I
Sbjct: 461 NHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPP--PGVKYFSSIINNL 518
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSLM---SFETNYKEVSKIYDQMQRAGLQPDV 271
K G + + + +M + G + + VT+NSLM N +E + D M G++P+
Sbjct: 519 CKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNC 578
Query: 272 VSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKC 331
Y L++ Y K R ++AL VF +ML GV+PT Y+I+L + A+ +F
Sbjct: 579 YIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTAAKKMFHE 638
Query: 332 MRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNN 391
M + I +Y +L + + A +L ++IT+ +I KV
Sbjct: 639 MIESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISAMFKVGR 698
Query: 392 LEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKN- 450
++ E++D + G+ PN ++ ++ K + ++ A + +E G D + N
Sbjct: 699 RQEAKELFDAISTYGLVPNIQTYSMMITNLIKEESYEEADNLFISVEKSGHASDSRLLNH 758
Query: 451 ---ILLSLAKTADERN 463
+LL+ A+ A N
Sbjct: 759 IVRMLLNKAEVAKASN 774
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 83/359 (23%), Positives = 152/359 (42%), Gaps = 7/359 (1%)
Query: 115 AEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILK 174
+ + M KG AP+ L+ AY R G A IF MQ+ G P +T+ ++
Sbjct: 386 VHNIFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVIS 445
Query: 175 LFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERG 234
+ +A F ++D + P + ++ +I G KA++L + M +
Sbjct: 446 SLCRIGRLDDALHKFNHMVDIG---VPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKD 502
Query: 235 VQQSTVTYNSL----MSFETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEA 290
+ V Y S + E E I D M + G +P+VV++ L+ Y EEA
Sbjct: 503 IPPPGVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEA 562
Query: 291 LAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSA 350
A+ + M G+ P Y L+D + +G +D A TVF+ M P Y+ +L
Sbjct: 563 FALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHG 622
Query: 351 YVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPN 410
A A+K F + + G ++ TYG ++ G + N ++ + +K+ +K +
Sbjct: 623 LFQARRTTAAKKMFHEMIESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFD 682
Query: 411 QTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELL 469
F ++ A K A + + + G P+ + +++++ + EA+ L
Sbjct: 683 IITFNIVISAMFKVGRRQEAKELFDAISTYGLVPNIQTYSMMITNLIKEESYEEADNLF 741
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 102/499 (20%), Positives = 202/499 (40%), Gaps = 50/499 (10%)
Query: 61 DLVLGTLVRLKQLKKWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLS 120
L++ L + K + K VLE + +++ N + + LI Y G +N++ +V
Sbjct: 264 SLIIDGLCKSKAMDK---AERVLEQM-VEAGTRPNSITYNSLIHGYSISGMWNESVRVFK 319
Query: 121 FMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEA- 179
M+ G P+V + + + A + GR A+ IF M GP+P ++Y +L + A
Sbjct: 320 QMSSCGVIPTVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYATAT 379
Query: 180 -NKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQS 238
+ + +F +L + + P++ +F+++I Y + G +KA +F M +G+
Sbjct: 380 DSCLADVHNIFNLMLTKG---IAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPD 436
Query: 239 TVT-----------------------------------YNSLMSFETNYKEVSK----IY 259
TVT Y L+ N+ E+ K I
Sbjct: 437 TVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELIS 496
Query: 260 DQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAIS 319
+ M + P V ++ +IN K R E + + M+ G RP +N L++ + +
Sbjct: 497 EMMNKDIPPPGVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLV 556
Query: 320 GMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITY 379
G +++A + M P+ Y T++ Y ++ A FR + G P + Y
Sbjct: 557 GNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLY 616
Query: 380 GTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMES 439
++ G + +++ +M +G + + ++ +N D A + +++ +
Sbjct: 617 SIILHGLFQARRTTAAKKMFHEMIESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFA 676
Query: 440 CGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGINGLSISVDEEDDDDDDDE 499
D NI++S R EA EL + P I S+ + ++ +E
Sbjct: 677 MNVKFDIITFNIVISAMFKVGRRQEAKELFDAISTYGLVPNIQTYSMMITNLIKEESYEE 736
Query: 500 DDDDNIYHDGDGDGDGDDN 518
DN++ + G D+
Sbjct: 737 --ADNLFISVEKSGHASDS 753
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 56/239 (23%), Positives = 104/239 (43%), Gaps = 1/239 (0%)
Query: 269 PDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTV 328
P + +Y +LI+ Y + R + LA+ +L G+ P +Y+ L+ F G VD+A +
Sbjct: 154 PTIHTYNILIDCYRRVHRPDLGLAIVGRLLKNGLGPDDFSYS-LIYGFVKDGEVDKAHCL 212
Query: 329 FKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAK 388
F M P I +++ +M+ AE +++ G P++ TY +I G K
Sbjct: 213 FLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSGIAPDLFTYSLIIDGLCK 272
Query: 389 VNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKA 448
++K + ++M G +PN + +++ Y + ++ +V +K+M SCG P
Sbjct: 273 SKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQMSSCGVIPTVDN 332
Query: 449 KNILLSLAKTADERNEANELLGNFNHPNNEPGINGLSISVDEEDDDDDDDEDDDDNIYH 507
N + NEA + + +P I S + D D NI++
Sbjct: 333 CNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYATATDSCLADVHNIFN 391
>gi|356561679|ref|XP_003549107.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g12775, mitochondrial-like [Glycine max]
Length = 750
Score = 151 bits (381), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 101/368 (27%), Positives = 175/368 (47%), Gaps = 12/368 (3%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
LI K +A + M ++G P V S+T L++A +GGR +NA+ F+R+ G
Sbjct: 384 LIDGLCKNHHLERAIALCKKMKEQGIQPDVYSYTILLDALCKGGRLENAKEFFQRLLVKG 443
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
+ TY +++ +A+ F EA ++ + E PD F +I + +
Sbjct: 444 YHLNVQTYNVMINGLCKADLFGEAMDLKSKM---EGKGCMPDAITFKTIICALFEKDEND 500
Query: 222 KARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSKIYDQMQRAGLQPDVVSYALLINAY 281
KA K+ M RG+Q++ + KE + M +A ++PDVV+Y L++ Y
Sbjct: 501 KAEKILREMIARGLQEAR---------KVRLKEAKIVLAVMTKACIKPDVVTYGTLMDGY 551
Query: 282 GKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDI 341
+ A VF M GV P + Y I++D VD+A ++F+ M+ P+I
Sbjct: 552 FLVNELKHAKYVFYSMAQMGVTPNVQCYTIMIDGLCKKKTVDEAMSLFEEMKHKNMFPNI 611
Query: 342 CSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDK 401
+YT+++ A +E A + +K+ G P+V +Y L+ G K LE EI+ +
Sbjct: 612 VTYTSLIDALCKNHHLERAIALLKEMKEHGIQPDVYSYTILLDGLCKSGRLEGAKEIFQR 671
Query: 402 MRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADE 461
+ V G N ++T +++ K FD A+ +ME G PD +I++ DE
Sbjct: 672 LLVKGYHLNVQVYTAMINELCKAGLFDEALDLQXKMEDKGCMPDAVTFDIIIWALFEKDE 731
Query: 462 RNEANELL 469
++A ++L
Sbjct: 732 NDKAEKIL 739
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 119/489 (24%), Positives = 213/489 (43%), Gaps = 33/489 (6%)
Query: 30 NWRRLMNQIEEVGSAVAVLRSER-TRGQPLPKDLVLGTLVRLKQLKKWNVVSEVLEWLR- 87
++R L+N + + G AV R R G + D+V+ + + L K ++ + +
Sbjct: 170 SYRTLINGLCKTGETKAVARLLRKLEGHSVKPDVVMYNTI-IHSLCKNKLLGDACDLYSE 228
Query: 88 -IQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGR 146
I N + + L+ + G +A +L+ M K P V + L++A G+ G+
Sbjct: 229 MIVKGISPNVVTYNALVYGFCIMGHLKEAFSLLNEMKLKNINPDVCTFNTLIDALGKEGK 288
Query: 147 YKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKM 206
K A+ + M + +P +TY ++ + NK K A+ VF ++ +S + P+ +
Sbjct: 289 MKAAKIVLAVMMKACIKPDVVTYNSLIDGYFFLNKVKNAKYVFYSM---AQSGVTPNVRT 345
Query: 207 FHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSL---MSFETNYKEVSKIYDQMQ 263
+ MI K ++A LF M + + VTY SL + + + + +M+
Sbjct: 346 YTTMIDGLCKEKMVDEAMSLFEEMKYKNMIPDIVTYTSLIDGLCKNHHLERAIALCKKMK 405
Query: 264 RAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVD 323
G+QPDV SY +L++A K R E A F+ +L G + YN++++ + +
Sbjct: 406 EQGIQPDVYSYTILLDALCKGGRLENAKEFFQRLLVKGYHLNVQTYNVMINGLCKADLFG 465
Query: 324 QARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFR-------------RLKQD 370
+A + M C PD ++ T++ A + + AEK R RLK+
Sbjct: 466 EAMDLKSKMEGKGCMPDAITFKTIICALFEKDENDKAEKILREMIARGLQEARKVRLKEA 525
Query: 371 GFV----------PNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDA 420
V P+V+TYGTL+ GY VN L+ ++ M G+ PN +T ++D
Sbjct: 526 KIVLAVMTKACIKPDVVTYGTLMDGYFLVNELKHAKYVFYSMAQMGVTPNVQCYTIMIDG 585
Query: 421 YGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPG 480
K K D A+ ++EM+ P+ L+ A LL +P
Sbjct: 586 LCKKKTVDEAMSLFEEMKHKNMFPNIVTYTSLIDALCKNHHLERAIALLKEMKEHGIQPD 645
Query: 481 INGLSISVD 489
+ +I +D
Sbjct: 646 VYSYTILLD 654
Score = 142 bits (359), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 115/435 (26%), Positives = 201/435 (46%), Gaps = 19/435 (4%)
Query: 34 LMN---QIEEVGSAVAVLRSERTRGQPLPKDLVLGTLVRLKQLKKWNVVSEVLEWL--RI 88
LMN + + A +VL + RG P + L TL+ K L + + L + +
Sbjct: 104 LMNCFCHLTHITFAFSVLANILKRGYH-PNAITLNTLI--KGLCFRGEIKKALYFHDQVV 160
Query: 89 QSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYK 148
+ N++ + LI K G+ ++L + P VV + ++ + +
Sbjct: 161 AQGFQLNQVSYRTLINGLCKTGETKAVARLLRKLEGHSVKPDVVMYNTIIHSLCKNKLLG 220
Query: 149 NAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEK-SPLKPDQKMF 207
+A ++ M G P+ +TY ++ F KEA +LL+E K + PD F
Sbjct: 221 DACDLYSEMIVKGISPNVVTYNALVYGFCIMGHLKEA----FSLLNEMKLKNINPDVCTF 276
Query: 208 HMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMS---FETNYKEVSKIYDQMQR 264
+ +I K G + A+ + A+M + ++ VTYNSL+ F K ++ M +
Sbjct: 277 NTLIDALGKEGKMKAAKIVLAVMMKACIKPDVVTYNSLIDGYFFLNKVKNAKYVFYSMAQ 336
Query: 265 AGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQ 324
+G+ P+V +Y +I+ K + +EA+++FEEM + P Y L+D + +++
Sbjct: 337 SGVTPNVRTYTTMIDGLCKEKMVDEAMSLFEEMKYKNMIPDIVTYTSLIDGLCKNHHLER 396
Query: 325 ARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIK 384
A + K M+ PD+ SYT +L A +E A++FF+RL G+ NV TY +I
Sbjct: 397 AIALCKKMKEQGIQPDVYSYTILLDALCKGGRLENAKEFFQRLLVKGYHLNVQTYNVMIN 456
Query: 385 GYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPP 444
G K + + M++ KM G P+ F TI+ A + + D A +EM + G
Sbjct: 457 GLCKADLFGEAMDLKSKMEGKGCMPDAITFKTIICALFEKDENDKAEKILREMIARGL-- 514
Query: 445 DQKAKNILLSLAKTA 459
Q+A+ + L AK
Sbjct: 515 -QEARKVRLKEAKIV 528
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 91/371 (24%), Positives = 183/371 (49%), Gaps = 6/371 (1%)
Query: 101 MLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSS 160
+L+ + A VL+ + K+GY P+ ++ L++ G K A ++ +
Sbjct: 103 ILMNCFCHLTHITFAFSVLANILKRGYHPNAITLNTLIKGLCFRGEIKKALYFHDQVVAQ 162
Query: 161 GPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGY 220
G + + ++Y+ ++ + + K + L E +KPD M++ +I+ K
Sbjct: 163 GFQLNQVSYRTLINGLCKTGETKAVARLLRKL---EGHSVKPDVVMYNTIIHSLCKNKLL 219
Query: 221 EKARKLFALMAERGVQQSTVTYNSLM---SFETNYKEVSKIYDQMQRAGLQPDVVSYALL 277
A L++ M +G+ + VTYN+L+ + KE + ++M+ + PDV ++ L
Sbjct: 220 GDACDLYSEMIVKGISPNVVTYNALVYGFCIMGHLKEAFSLLNEMKLKNINPDVCTFNTL 279
Query: 278 INAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRC 337
I+A GK + + A V M+ A ++P YN L+D + V A+ VF M +
Sbjct: 280 IDALGKEGKMKAAKIVLAVMMKACIKPDVVTYNSLIDGYFFLNKVKNAKYVFYSMAQSGV 339
Query: 338 SPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMME 397
+P++ +YTTM+ ++ A F +K +P+++TY +LI G K ++LE+ +
Sbjct: 340 TPNVRTYTTMIDGLCKEKMVDEAMSLFEEMKYKNMIPDIVTYTSLIDGLCKNHHLERAIA 399
Query: 398 IYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAK 457
+ KM+ GI+P+ +T ++DA K ++A +++ + G+ + + N++++
Sbjct: 400 LCKKMKEQGIQPDVYSYTILLDALCKGGRLENAKEFFQRLLVKGYHLNVQTYNVMINGLC 459
Query: 458 TADERNEANEL 468
AD EA +L
Sbjct: 460 KADLFGEAMDL 470
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 86/378 (22%), Positives = 168/378 (44%), Gaps = 6/378 (1%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + LI +G+ KA + +G+ + VS+ L+ + G K +
Sbjct: 132 NAITLNTLIKGLCFRGEIKKALYFHDQVVAQGFQLNQVSYRTLINGLCKTGETKAVARLL 191
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
R+++ +P + Y I+ + +A +++ ++ + SP + ++ ++Y +
Sbjct: 192 RKLEGHSVKPDVVMYNTIIHSLCKNKLLGDACDLYSEMIVKGISP---NVVTYNALVYGF 248
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSL---MSFETNYKEVSKIYDQMQRAGLQPDV 271
G ++A L M + + T+N+L + E K + M +A ++PDV
Sbjct: 249 CIMGHLKEAFSLLNEMKLKNINPDVCTFNTLIDALGKEGKMKAAKIVLAVMMKACIKPDV 308
Query: 272 VSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKC 331
V+Y LI+ Y + + A VF M +GV P + Y ++D MVD+A ++F+
Sbjct: 309 VTYNSLIDGYFFLNKVKNAKYVFYSMAQSGVTPNVRTYTTMIDGLCKEKMVDEAMSLFEE 368
Query: 332 MRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNN 391
M+ PDI +YT+++ +E A +++K+ G P+V +Y L+ K
Sbjct: 369 MKYKNMIPDIVTYTSLIDGLCKNHHLERAIALCKKMKEQGIQPDVYSYTILLDALCKGGR 428
Query: 392 LEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNI 451
LE E + ++ V G N + +++ K F A+ +ME G PD
Sbjct: 429 LENAKEFFQRLLVKGYHLNVQTYNVMINGLCKADLFGEAMDLKSKMEGKGCMPDAITFKT 488
Query: 452 LLSLAKTADERNEANELL 469
++ DE ++A ++L
Sbjct: 489 IICALFEKDENDKAEKIL 506
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 68/280 (24%), Positives = 129/280 (46%), Gaps = 18/280 (6%)
Query: 97 MDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRR 156
+ F +I A ++ + +KAEK+L M +G L EA R R K A+ +
Sbjct: 484 ITFKTIICALFEKDENDKAEKILREMIARG----------LQEA--RKVRLKEAKIVLAV 531
Query: 157 MQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKK 216
M + +P +TY ++ + N+ K A+ VF ++ + + P+ + + +MI K
Sbjct: 532 MTKACIKPDVVTYGTLMDGYFLVNELKHAKYVFYSM---AQMGVTPNVQCYTIMIDGLCK 588
Query: 217 AGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSK---IYDQMQRAGLQPDVVS 273
++A LF M + + + VTY SL+ + + + +M+ G+QPDV S
Sbjct: 589 KKTVDEAMSLFEEMKHKNMFPNIVTYTSLIDALCKNHHLERAIALLKEMKEHGIQPDVYS 648
Query: 274 YALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMR 333
Y +L++ K+ R E A +F+ +L G + Y +++ +G+ D+A + M
Sbjct: 649 YTILLDGLCKSGRLEGAKEIFQRLLVKGYHLNVQVYTAMINELCKAGLFDEALDLQXKME 708
Query: 334 RDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFV 373
C PD ++ ++ A + + AEK + G +
Sbjct: 709 DKGCMPDAVTFDIIIWALFEKDENDKAEKILXEMIARGLM 748
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/253 (20%), Positives = 97/253 (38%), Gaps = 38/253 (15%)
Query: 239 TVTYNSLMSFETN---YKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFE 295
T +N ++S N Y V ++ + + G PD+ + +L+N + A +V
Sbjct: 63 TFHFNYILSSLVNNKHYPTVISLFKKFESNGATPDLCTLNILMNCFCHLTHITFAFSVLA 122
Query: 296 EMLDAGVRPTHKAYNILLDAFAISGMVDQA------------------------------ 325
+L G P N L+ G + +A
Sbjct: 123 NILKRGYHPNAITLNTLIKGLCFRGEIKKALYFHDQVVAQGFQLNQVSYRTLINGLCKTG 182
Query: 326 --RTVFKCMRR---DRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYG 380
+ V + +R+ PD+ Y T++ + + A + + G PNV+TY
Sbjct: 183 ETKAVARLLRKLEGHSVKPDVVMYNTIIHSLCKNKLLGDACDLYSEMIVKGISPNVVTYN 242
Query: 381 TLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESC 440
L+ G+ + +L++ + ++M++ I P+ F T++DA GK +A + M
Sbjct: 243 ALVYGFCIMGHLKEAFSLLNEMKLKNINPDVCTFNTLIDALGKEGKMKAAKIVLAVMMKA 302
Query: 441 GFPPDQKAKNILL 453
PD N L+
Sbjct: 303 CIKPDVVTYNSLI 315
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 48/231 (20%), Positives = 94/231 (40%)
Query: 259 YDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAI 318
+D+M P + ++++ + +++F++ G P NIL++ F
Sbjct: 51 FDRMLLMRPPPPTFHFNYILSSLVNNKHYPTVISLFKKFESNGATPDLCTLNILMNCFCH 110
Query: 319 SGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVIT 378
+ A +V + + P+ + T++ +++ A F ++ GF N ++
Sbjct: 111 LTHITFAFSVLANILKRGYHPNAITLNTLIKGLCFRGEIKKALYFHDQVVAQGFQLNQVS 170
Query: 379 YGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEME 438
Y TLI G K + + + K+ + +KP+ ++ TI+ + KNK A Y EM
Sbjct: 171 YRTLINGLCKTGETKAVARLLRKLEGHSVKPDVVMYNTIIHSLCKNKLLGDACDLYSEMI 230
Query: 439 SCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGINGLSISVD 489
G P+ N L+ EA LL N P + + +D
Sbjct: 231 VKGISPNVVTYNALVYGFCIMGHLKEAFSLLNEMKLKNINPDVCTFNTLID 281
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 92/200 (46%), Gaps = 9/200 (4%)
Query: 290 ALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLS 349
A+A F+ ML P +N +L + + ++FK + +PD+C+ +++
Sbjct: 47 AVASFDRMLLMRPPPPTFHFNYILSSLVNNKHYPTVISLFKKFESNGATPDLCTLNILMN 106
Query: 350 AYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKP 409
+ + + + A + + G+ PN IT TLIKG ++K + +D++ G +
Sbjct: 107 CFCHLTHITFAFSVLANILKRGYHPNAITLNTLIKGLCFRGEIKKALYFHDQVVAQGFQL 166
Query: 410 NQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKN-ILLSLAKTADERNEANEL 468
NQ + T+++ K + + +++E PD N I+ SL K N+L
Sbjct: 167 NQVSYRTLINGLCKTGETKAVARLLRKLEGHSVKPDVVMYNTIIHSLCK--------NKL 218
Query: 469 LGNFNHPNNEPGINGLSISV 488
LG+ +E + G+S +V
Sbjct: 219 LGDACDLYSEMIVKGISPNV 238
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 68/143 (47%), Gaps = 3/143 (2%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + + LI A K +A +L M + G P V S+T L++ + GR + A+ IF
Sbjct: 610 NIVTYTSLIDALCKNHHLERAIALLKEMKEHGIQPDVYSYTILLDGLCKSGRLEGAKEIF 669
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
+R+ G + Y ++ +A F EA ++ + E+K + PD F ++I+
Sbjct: 670 QRLLVKGYHLNVQVYTAMINELCKAGLFDEALDLQXKM--EDKGCM-PDAVTFDIIIWAL 726
Query: 215 KKAGGYEKARKLFALMAERGVQQ 237
+ +KA K+ M RG+ +
Sbjct: 727 FEKDENDKAEKILXEMIARGLMK 749
>gi|449444190|ref|XP_004139858.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
gi|449530677|ref|XP_004172320.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
Length = 839
Score = 151 bits (381), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 105/409 (25%), Positives = 190/409 (46%), Gaps = 45/409 (11%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + LI+ + G F A V M G P+ V+++AL+ GR++ A IF
Sbjct: 341 NVQTYTALISGLSRDGKFEVAIGVYHKMLADGLVPTAVTYSALINQLYVEGRFETALTIF 400
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
M S P+ TY +I+K F ++A +F +L K+ P+ ++++I++Y
Sbjct: 401 EWMLSHDSLPNTETYNVIIKGFCSIGYIQKATAIFDQML---KAGPSPNVITYNIIIHIY 457
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSLMS-FETNYK--EVSKIYDQMQRAGLQPDV 271
K G A +L +M G++ T TY +L+S F K ++++M G+ P+V
Sbjct: 458 FKQGYMNNAMRLLEMMKGNGLKLDTWTYANLISGFSRGGKLEHAFSLFNEMVEHGISPNV 517
Query: 272 VSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFA-------------- 317
V+Y +IN Y + ++ALA+F +M+++G P+ YN+++ F+
Sbjct: 518 VTYNAIINGYLTVAKVDDALALFWKMVESGNVPSSGTYNMMISGFSKTNRISEAENFCGK 577
Query: 318 ----------------ISGMVDQART-----VFKCMRRDRCSPDICSYTTMLSAYVNASD 356
I G+ RT +F M++ P++C+Y++++
Sbjct: 578 MVKQGLLPNVITYTSFIDGLCKNGRTSLAFKIFHEMKKRDYFPNLCTYSSLIDGLCQEGQ 637
Query: 357 MEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTT 416
E AE RL DG PNV TY TL++G + ++ + M+ G++P++ I+
Sbjct: 638 AEDAE----RLLDDGCEPNVDTYTTLVRGLCGKGRCYEADQLVESMKKKGLQPSEEIYRA 693
Query: 417 IMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEA 465
++ KN + +SA+ + M + GF P L+ A+ R +A
Sbjct: 694 LLVGQCKNLEVESALKIFDSMVTTGFQPCLSDYKALICALCKANFRQKA 742
Score = 149 bits (375), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 94/379 (24%), Positives = 172/379 (45%), Gaps = 6/379 (1%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N F +I +G +AE ++ + G P ++T+L+ + + G A +F
Sbjct: 201 NLFTFNAMIKILCNKGKVQEAELIMGHIFHYGACPDTFTYTSLIIGHCKNGNLDLAFEMF 260
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
RM G P+++TY ++ + +EA ++ ++D+ ++P + + I
Sbjct: 261 DRMVKDGCDPNSVTYSALINGLCSEGRLEEAMDMLEEMIDKG---IEPTVHAYTIPIVSL 317
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSL---MSFETNYKEVSKIYDQMQRAGLQPDV 271
AG +A KL M +RG + TY +L +S + ++ +Y +M GL P
Sbjct: 318 CDAGRSCEAVKLLGKMKKRGCGPNVQTYTALISGLSRDGKFEVAIGVYHKMLADGLVPTA 377
Query: 272 VSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKC 331
V+Y+ LIN R E AL +FE ML P + YN+++ F G + +A +F
Sbjct: 378 VTYSALINQLYVEGRFETALTIFEWMLSHDSLPNTETYNVIIKGFCSIGYIQKATAIFDQ 437
Query: 332 MRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNN 391
M + SP++ +Y ++ Y M A + +K +G + TY LI G+++
Sbjct: 438 MLKAGPSPNVITYNIIIHIYFKQGYMNNAMRLLEMMKGNGLKLDTWTYANLISGFSRGGK 497
Query: 392 LEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNI 451
LE ++++M +GI PN + I++ Y D A+ + +M G P N+
Sbjct: 498 LEHAFSLFNEMVEHGISPNVVTYNAIINGYLTVAKVDDALALFWKMVESGNVPSSGTYNM 557
Query: 452 LLSLAKTADERNEANELLG 470
++S + +EA G
Sbjct: 558 MISGFSKTNRISEAENFCG 576
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 92/375 (24%), Positives = 176/375 (46%), Gaps = 37/375 (9%)
Query: 103 ITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGP 162
I + G +A K+L M K+G P+V ++TAL+ R G+++ A ++ +M + G
Sbjct: 314 IVSLCDAGRSCEAVKLLGKMKKRGCGPNVQTYTALISGLSRDGKFEVAIGVYHKMLADGL 373
Query: 163 RPSALTYQ-IILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
P+A+TY +I +L+VE +F+ A +F +L + P+ + ++++I + G +
Sbjct: 374 VPTAVTYSALINQLYVEG-RFETALTIFEWMLSHDS---LPNTETYNVIIKGFCSIGYIQ 429
Query: 222 KARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSKIYDQMQRAGLQPDVVSYALLINAY 281
KA + I+DQM +AG P+V++Y ++I+ Y
Sbjct: 430 KA--------------------------------TAIFDQMLKAGPSPNVITYNIIIHIY 457
Query: 282 GKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDI 341
K A+ + E M G++ Y L+ F+ G ++ A ++F M SP++
Sbjct: 458 FKQGYMNNAMRLLEMMKGNGLKLDTWTYANLISGFSRGGKLEHAFSLFNEMVEHGISPNV 517
Query: 342 CSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDK 401
+Y +++ Y+ + ++ A F ++ + G VP+ TY +I G++K N + + K
Sbjct: 518 VTYNAIINGYLTVAKVDDALALFWKMVESGNVPSSGTYNMMISGFSKTNRISEAENFCGK 577
Query: 402 MRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADE 461
M G+ PN +T+ +D KN A + EM+ + P+ + L+ +
Sbjct: 578 MVKQGLLPNVITYTSFIDGLCKNGRTSLAFKIFHEMKKRDYFPNLCTYSSLIDGLCQEGQ 637
Query: 462 RNEANELLGNFNHPN 476
+A LL + PN
Sbjct: 638 AEDAERLLDDGCEPN 652
Score = 115 bits (288), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 88/419 (21%), Positives = 179/419 (42%), Gaps = 42/419 (10%)
Query: 100 LMLITAYGKQGDFNKAEKVLSFMNKK-GYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQ 158
+++I + +G+ + +VLS +N + ++ S + L+ G+ ++ M
Sbjct: 135 ILMIKSCRNEGEVKRVIQVLSEINTTYDFGYTLYSFSTLLIQLGKFDMDGLGRDVYIEML 194
Query: 159 SSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAG 218
+SG RP+ T+ ++K+ K +EAE + + P D + +I + K G
Sbjct: 195 NSGIRPNLFTFNAMIKILCNKGKVQEAELIMGHIFHYGACP---DTFTYTSLIIGHCKNG 251
Query: 219 GYEKARKLFALMAERGVQQSTVTYNSLMS----------------------FETNYK--- 253
+ A ++F M + G ++VTY++L++ E
Sbjct: 252 NLDLAFEMFDRMVKDGCDPNSVTYSALINGLCSEGRLEEAMDMLEEMIDKGIEPTVHAYT 311
Query: 254 -------------EVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDA 300
E K+ +M++ G P+V +Y LI+ + + E A+ V+ +ML
Sbjct: 312 IPIVSLCDAGRSCEAVKLLGKMKKRGCGPNVQTYTALISGLSRDGKFEVAIGVYHKMLAD 371
Query: 301 GVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGA 360
G+ PT Y+ L++ + G + A T+F+ M P+ +Y ++ + + ++ A
Sbjct: 372 GLVPTAVTYSALINQLYVEGRFETALTIFEWMLSHDSLPNTETYNVIIKGFCSIGYIQKA 431
Query: 361 EKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDA 420
F ++ + G PNVITY +I Y K + M + + M+ NG+K + + ++
Sbjct: 432 TAIFDQMLKAGPSPNVITYNIIIHIYFKQGYMNNAMRLLEMMKGNGLKLDTWTYANLISG 491
Query: 421 YGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEP 479
+ + + A + EM G P+ N +++ T + ++A L N P
Sbjct: 492 FSRGGKLEHAFSLFNEMVEHGISPNVVTYNAIINGYLTVAKVDDALALFWKMVESGNVP 550
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 81/348 (23%), Positives = 152/348 (43%), Gaps = 10/348 (2%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + + ++I Y KQG N A ++L M G ++ L+ + RGG+ ++A ++F
Sbjct: 446 NVITYNIIIHIYFKQGYMNNAMRLLEMMKGNGLKLDTWTYANLISGFSRGGKLEHAFSLF 505
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
M G P+ +TY I+ ++ K +A +F +++ P ++MMI +
Sbjct: 506 NEMVEHGISPNVVTYNAIINGYLTVAKVDDALALFWKMVESGNVP---SSGTYNMMISGF 562
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVS---KIYDQMQRAGLQPDV 271
K +A M ++G+ + +TY S + S KI+ +M++ P++
Sbjct: 563 SKTNRISEAENFCGKMVKQGLLPNVITYTSFIDGLCKNGRTSLAFKIFHEMKKRDYFPNL 622
Query: 272 VSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKC 331
+Y+ LI+ + + E+A E +LD G P Y L+ G +A + +
Sbjct: 623 CTYSSLIDGLCQEGQAEDA----ERLLDDGCEPNVDTYTTLVRGLCGKGRCYEADQLVES 678
Query: 332 MRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNN 391
M++ P Y +L ++E A K F + GF P + Y LI K N
Sbjct: 679 MKKKGLQPSEEIYRALLVGQCKNLEVESALKIFDSMVTTGFQPCLSDYKALICALCKANF 738
Query: 392 LEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMES 439
+K ++ M ++ ++T ++D K + D ++ MES
Sbjct: 739 RQKAQCMFQTMLKKHWNSDEVVWTVLLDGLLKEGETDLSLELLHVMES 786
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/241 (25%), Positives = 108/241 (44%), Gaps = 10/241 (4%)
Query: 101 MLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSS 160
M+I+ + K ++AE M K+G P+V+++T+ ++ + GR A IF M+
Sbjct: 557 MMISGFSKTNRISEAENFCGKMVKQGLLPNVITYTSFIDGLCKNGRTSLAFKIFHEMKKR 616
Query: 161 GPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGY 220
P+ TY ++ + + ++AE LLD+ +P+ + ++ G
Sbjct: 617 DYFPNLCTYSSLIDGLCQEGQAEDAER----LLDDG---CEPNVDTYTTLVRGLCGKGRC 669
Query: 221 EKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVS---KIYDQMQRAGLQPDVVSYALL 277
+A +L M ++G+Q S Y +L+ + EV KI+D M G QP + Y L
Sbjct: 670 YEADQLVESMKKKGLQPSEEIYRALLVGQCKNLEVESALKIFDSMVTTGFQPCLSDYKAL 729
Query: 278 INAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRC 337
I A KA ++A +F+ ML + +LLD G D + + M C
Sbjct: 730 ICALCKANFRQKAQCMFQTMLKKHWNSDEVVWTVLLDGLLKEGETDLSLELLHVMESRNC 789
Query: 338 S 338
+
Sbjct: 790 T 790
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 82/200 (41%), Gaps = 2/200 (1%)
Query: 282 GKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDI 341
G+ +R + L+ D G T +++ LL M R V+ M P++
Sbjct: 145 GEVKRVIQVLSEINTTYDFGY--TLYSFSTLLIQLGKFDMDGLGRDVYIEMLNSGIRPNL 202
Query: 342 CSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDK 401
++ M+ N ++ AE + G P+ TY +LI G+ K NL+ E++D+
Sbjct: 203 FTFNAMIKILCNKGKVQEAELIMGHIFHYGACPDTFTYTSLIIGHCKNGNLDLAFEMFDR 262
Query: 402 MRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADE 461
M +G PN ++ +++ + A+ +EM G P A I + A
Sbjct: 263 MVKDGCDPNSVTYSALINGLCSEGRLEEAMDMLEEMIDKGIEPTVHAYTIPIVSLCDAGR 322
Query: 462 RNEANELLGNFNHPNNEPGI 481
EA +LLG P +
Sbjct: 323 SCEAVKLLGKMKKRGCGPNV 342
>gi|359488005|ref|XP_002263693.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 586
Score = 151 bits (381), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 105/399 (26%), Positives = 175/399 (43%), Gaps = 42/399 (10%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + + LI K G+ N A ++L M + P VV +T+++++ + + A +F
Sbjct: 173 NVVTYGTLINGLCKVGNTNAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTEAFNLF 232
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEE-KSPLKPDQKMFHMMIYM 213
+M G P TY ++ ++K TLL++ S + PD +F ++
Sbjct: 233 SKMVGQGISPDIFTYTSLIHSLCNLCEWKHVT----TLLNQMINSKIMPDVVIFSTVVDA 288
Query: 214 YKKAGGYEKARKLFALMAERGVQQSTVTYNSLM---SFETNYKEVSKIYDQMQRAGLQPD 270
K G +A + +M RGV+ + VTYN+LM ++ E K++D M G P+
Sbjct: 289 LCKEGKITEAHDVVDMMIIRGVEPNVVTYNALMDGHCLQSEMDEAVKVFDTMVHNGYAPN 348
Query: 271 VVSYALLINAYGKARRE----------------------------------EEALAVFEE 296
V+SY LIN Y K +R ++A+A+F E
Sbjct: 349 VISYNTLINGYCKIQRMDKATYLFEEMCQKELIPNTVTYNTLMHXCHVGRLQDAIALFHE 408
Query: 297 MLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASD 356
M+ G P Y ILLD +D+A + K + PDI YT ++ A +
Sbjct: 409 MVAHGQIPDLATYRILLDYLCKKSHLDEAMALLKTIEGSNMDPDIQIYTIVIDGMCRAGE 468
Query: 357 MEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTT 416
+E A F L G PNV TY +I G + L++ +++ +M NG P+ + T
Sbjct: 469 LEAARDIFSNLSSKGLRPNVRTYTIMINGLCRRGLLDEANKLFMEMDGNGCSPDGCTYNT 528
Query: 417 IMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSL 455
I +NK+ A+ +EM + GF D +L+ +
Sbjct: 529 ITQGLLQNKEALRAIQLLQEMLARGFSADVSTTTLLVEM 567
Score = 138 bits (348), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 108/427 (25%), Positives = 178/427 (41%), Gaps = 49/427 (11%)
Query: 106 YGKQGDFNKAEKVLSFMNKKGY---APSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGP 162
+ K +FN + LS N+ + PS V L+ + + +Y ++ +M S G
Sbjct: 41 HSKSLNFNTLDDALSSFNRMLHMHPPPSTVDFNRLLTSIAKTKQYPTVFSLSNQMDSFGI 100
Query: 163 RPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEK 222
P T I++ F N+ A V +L K +PD F +I G
Sbjct: 101 PPDVYTLNILINSFCHLNRLGFAFSVLAKIL---KLGHQPDTATFTTLIRGLCVEGKIGD 157
Query: 223 ARKLFALMAERGVQQSTVTYNSLMSFET---NYKEVSKIYDQMQRAGLQPDVVSYALLIN 279
A LF M G Q + VTY +L++ N ++ M++ QPDVV Y +I+
Sbjct: 158 ALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTNAAIRLLRSMEQGNCQPDVVVYTSIID 217
Query: 280 AYGKARREEEALAVFEEMLDAGVRP--------THKAYNI-------------------- 311
+ K R+ EA +F +M+ G+ P H N+
Sbjct: 218 SLCKDRQVTEAFNLFSKMVGQGISPDIFTYTSLIHSLCNLCEWKHVTTLLNQMINSKIMP 277
Query: 312 -------LLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFF 364
++DA G + +A V M P++ +Y ++ + S+M+ A K F
Sbjct: 278 DVVIFSTVVDALCKEGKITEAHDVVDMMIIRGVEPNVVTYNALMDGHCLQSEMDEAVKVF 337
Query: 365 RRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDA--YG 422
+ +G+ PNVI+Y TLI GY K+ ++K ++++M + PN + T+M G
Sbjct: 338 DTMVHNGYAPNVISYNTLINGYCKIQRMDKATYLFEEMCQKELIPNTVTYNTLMHXCHVG 397
Query: 423 KNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGIN 482
+ +D A+ + EM + G PD ILL +EA LL N +P I
Sbjct: 398 RLQD---AIALFHEMVAHGQIPDLATYRILLDYLCKKSHLDEAMALLKTIEGSNMDPDIQ 454
Query: 483 GLSISVD 489
+I +D
Sbjct: 455 IYTIVID 461
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/295 (22%), Positives = 130/295 (44%), Gaps = 42/295 (14%)
Query: 45 VAVLRSERTRGQPLPKDLVLGTLV-RLKQLKKWNVVSEVLEWLRIQSWWDFNEMDFLMLI 103
V L ++ + +P ++ T+V L + K +V++ + I+ + N + + L+
Sbjct: 263 VTTLLNQMINSKIMPDVVIFSTVVDALCKEGKITEAHDVVDMMIIRGV-EPNVVTYNALM 321
Query: 104 TAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGR-------------------- 143
+ Q + ++A KV M GYAP+V+S+ L+ Y +
Sbjct: 322 DGHCLQSEMDEAVKVFDTMVHNGYAPNVISYNTLINGYCKIQRMDKATYLFEEMCQKELI 381
Query: 144 --------------GGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVF 189
GR ++A A+F M + G P TY+I+L + + EA +
Sbjct: 382 PNTVTYNTLMHXCHVGRLQDAIALFHEMVAHGQIPDLATYRILLDYLCKKSHLDEAMALL 441
Query: 190 MTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFE 249
T+ E S + PD +++ ++I +AG E AR +F+ ++ +G++ + TY +++
Sbjct: 442 KTI---EGSNMDPDIQIYTIVIDGMCRAGELEAARDIFSNLSSKGLRPNVRTYTIMINGL 498
Query: 250 TN---YKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAG 301
E +K++ +M G PD +Y + + + A+ + +EML G
Sbjct: 499 CRRGLLDEANKLFMEMDGNGCSPDGCTYNTITQGLLQNKEALRAIQLLQEMLARG 553
>gi|356518209|ref|XP_003527773.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
chloroplastic-like [Glycine max]
Length = 1113
Score = 151 bits (381), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 99/397 (24%), Positives = 177/397 (44%), Gaps = 41/397 (10%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + + I G+ G + A +L M +G P VV++T L++A G+ A+ ++
Sbjct: 261 NIYTYTICIRVLGRAGRIDDAYGILKTMEDEGCGPDVVTYTVLIDALCAAGKLDKAKELY 320
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
+M++S +P +TY ++ F + + E V + E PD + +++
Sbjct: 321 TKMRASSHKPDLVTYITLMSKF---GNYGDLETVKRFWSEMEADGYAPDVVTYTILVEAL 377
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYK---EVSKIYDQMQRAGLQPDV 271
K+G ++A + +M RG+ + TYN+L+S N + E ++++ M+ G+ P
Sbjct: 378 CKSGKVDQAFDMLDVMRVRGIVPNLHTYNTLISGLLNLRRLDEALELFNNMESLGVAPTA 437
Query: 272 VSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKA----------------------- 308
SY L I+ YGK E+AL FE+M G+ P+ A
Sbjct: 438 YSYVLFIDYYGKLGDPEKALDTFEKMKKRGIMPSIAACNASLYSLAEMGRIREAKDIFND 497
Query: 309 ------------YNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASD 356
YN+++ ++ +G +D+A + M + C PDI +++ A
Sbjct: 498 IHNCGLSPDSVTYNMMMKCYSKAGQIDKATKLLTEMLSEGCEPDIIVVNSLIDTLYKAGR 557
Query: 357 MEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTT 416
++ A + F RLK P V+TY LI G K L K ++++ M+ +G PN F
Sbjct: 558 VDEAWQMFGRLKDLKLAPTVVTYNILITGLGKEGKLLKALDLFGSMKESGCPPNTVTFNA 617
Query: 417 IMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILL 453
++D KN D A+ + M PD N ++
Sbjct: 618 LLDCLCKNDAVDLALKMFCRMTIMNCSPDVLTYNTII 654
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 88/334 (26%), Positives = 163/334 (48%), Gaps = 12/334 (3%)
Query: 119 LSFMNKKGYAPSVVSHTA-----LMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIIL 173
LS+ P++V HT ++E GR ++ +F MQ + TY I
Sbjct: 106 LSYFKMVSQLPNIV-HTPETCNYMLEFLRVHGRVEDMAFVFDLMQKQVINRNPNTYLTIF 164
Query: 174 KLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAER 233
K ++A L ++ + ++ +IY + G ++A K++ M
Sbjct: 165 KALSIKGGIRQAP---FALGKMRQAGFVLNAYSYNGLIYFLLQPGFCKEALKVYKRMISE 221
Query: 234 GVQQSTVTYNSLMSFETNYKEVSKIYD---QMQRAGLQPDVVSYALLINAYGKARREEEA 290
G++ S TY++LM ++ I D +M+ GL+P++ +Y + I G+A R ++A
Sbjct: 222 GLKPSMKTYSALMVALGRRRDTGTIMDLLEEMETLGLRPNIYTYTICIRVLGRAGRIDDA 281
Query: 291 LAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSA 350
+ + M D G P Y +L+DA +G +D+A+ ++ MR PD+ +Y T++S
Sbjct: 282 YGILKTMEDEGCGPDVVTYTVLIDALCAAGKLDKAKELYTKMRASSHKPDLVTYITLMSK 341
Query: 351 YVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPN 410
+ N D+E ++F+ ++ DG+ P+V+TY L++ K +++ ++ D MRV GI PN
Sbjct: 342 FGNYGDLETVKRFWSEMEADGYAPDVVTYTILVEALCKSGKVDQAFDMLDVMRVRGIVPN 401
Query: 411 QTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPP 444
+ T++ + D A+ + MES G P
Sbjct: 402 LHTYNTLISGLLNLRRLDEALELFNNMESLGVAP 435
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 101/404 (25%), Positives = 182/404 (45%), Gaps = 11/404 (2%)
Query: 88 IQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRY 147
+ + + +N + + +L + K+ A KV M +G PS+ +++ALM A GR
Sbjct: 189 VLNAYSYNGLIYFLLQPGFCKE-----ALKVYKRMISEGLKPSMKTYSALMVALGRRRDT 243
Query: 148 KNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMF 207
+ M++ G RP+ TY I +++ A + +A + T+ DE P D +
Sbjct: 244 GTIMDLLEEMETLGLRPNIYTYTICIRVLGRAGRIDDAYGILKTMEDEGCGP---DVVTY 300
Query: 208 HMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNY---KEVSKIYDQMQR 264
++I AG +KA++L+ M + VTY +LMS NY + V + + +M+
Sbjct: 301 TVLIDALCAAGKLDKAKELYTKMRASSHKPDLVTYITLMSKFGNYGDLETVKRFWSEMEA 360
Query: 265 AGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQ 324
G PDVV+Y +L+ A K+ + ++A + + M G+ P YN L+ +D+
Sbjct: 361 DGYAPDVVTYTILVEALCKSGKVDQAFDMLDVMRVRGIVPNLHTYNTLISGLLNLRRLDE 420
Query: 325 ARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIK 384
A +F M +P SY + Y D E A F ++K+ G +P++ +
Sbjct: 421 ALELFNNMESLGVAPTAYSYVLFIDYYGKLGDPEKALDTFEKMKKRGIMPSIAACNASLY 480
Query: 385 GYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPP 444
A++ + + +I++ + G+ P+ + +M Y K D A EM S G P
Sbjct: 481 SLAEMGRIREAKDIFNDIHNCGLSPDSVTYNMMMKCYSKAGQIDKATKLLTEMLSEGCEP 540
Query: 445 DQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGINGLSISV 488
D N L+ A +EA ++ G P + +I +
Sbjct: 541 DIIVVNSLIDTLYKAGRVDEAWQMFGRLKDLKLAPTVVTYNILI 584
Score = 139 bits (349), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 96/381 (25%), Positives = 173/381 (45%), Gaps = 7/381 (1%)
Query: 97 MDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRR 156
+ ++ L++ +G GD ++ S M GYAP VV++T L+EA + G+ A +
Sbjct: 333 VTYITLMSKFGNYGDLETVKRFWSEMEADGYAPDVVTYTILVEALCKSGKVDQAFDMLDV 392
Query: 157 MQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKK 216
M+ G P+ TY ++ + + EA E+F + E + P + + I Y K
Sbjct: 393 MRVRGIVPNLHTYNTLISGLLNLRRLDEALELFNNM---ESLGVAPTAYSYVLFIDYYGK 449
Query: 217 AGGYEKARKLFALMAERGVQQSTVTYN-SLMSFE--TNYKEVSKIYDQMQRAGLQPDVVS 273
G EKA F M +RG+ S N SL S +E I++ + GL PD V+
Sbjct: 450 LGDPEKALDTFEKMKKRGIMPSIAACNASLYSLAEMGRIREAKDIFNDIHNCGLSPDSVT 509
Query: 274 YALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMR 333
Y +++ Y KA + ++A + EML G P N L+D +G VD+A +F ++
Sbjct: 510 YNMMMKCYSKAGQIDKATKLLTEMLSEGCEPDIIVVNSLIDTLYKAGRVDEAWQMFGRLK 569
Query: 334 RDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLE 393
+ +P + +Y +++ + A F +K+ G PN +T+ L+ K + ++
Sbjct: 570 DLKLAPTVVTYNILITGLGKEGKLLKALDLFGSMKESGCPPNTVTFNALLDCLCKNDAVD 629
Query: 394 KMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILL 453
++++ +M + P+ + TI+ K A +Y +M+ PD LL
Sbjct: 630 LALKMFCRMTIMNCSPDVLTYNTIIYGLIKEGRAGYAFWFYHQMKK-FLSPDHVTLYTLL 688
Query: 454 SLAKTADERNEANELLGNFNH 474
+A +++ F H
Sbjct: 689 PGVVKDGRVEDAIKIVMEFVH 709
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 79/306 (25%), Positives = 156/306 (50%), Gaps = 6/306 (1%)
Query: 115 AEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILK 174
A K+ M G P++ ++ L++A+G+ R ++ M G +P+ +T+ II+
Sbjct: 807 ALKLFVEMKNAGCCPNIFTYNLLLDAHGKSKRIDELFELYNEMLCRGCKPNIITHNIIIS 866
Query: 175 LFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERG 234
V++N +A +++ ++ + SP + +I KAG E+A K+F M +
Sbjct: 867 ALVKSNSINKALDLYYEIISGDFSP---TPCTYGPLIGGLLKAGRSEEAMKIFEEMPDYQ 923
Query: 235 VQQSTVTYNSLMSF---ETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEAL 291
+ + YN L++ N ++ +M + G++PD+ SY +L+ R ++A+
Sbjct: 924 CKPNCAIYNILINGFGKAGNVNIACDLFKRMIKEGIRPDLKSYTILVECLFMTGRVDDAV 983
Query: 292 AVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAY 351
FEE+ G+ P +YN++++ S +++A ++F M+ SP++ +Y ++ +
Sbjct: 984 HYFEELKLTGLDPDTVSYNLMINGLGKSRRLEEALSLFSEMKNRGISPELYTYNALILHF 1043
Query: 352 VNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQ 411
NA ++ A K F L+ G PNV TY LI+G++K N ++ ++ KM + G PN
Sbjct: 1044 GNAGMVDQAGKMFEELQFMGLEPNVFTYNALIRGHSKSGNKDRAFSVFKKMMIVGCSPNA 1103
Query: 412 TIFTTI 417
F +
Sbjct: 1104 GTFAQL 1109
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 99/391 (25%), Positives = 178/391 (45%), Gaps = 8/391 (2%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N +L + A +G +A L M + G+ + S+ L+ + G K A ++
Sbjct: 156 NPNTYLTIFKALSIKGGIRQAPFALGKMRQAGFVLNAYSYNGLIYFLLQPGFCKEALKVY 215
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDE-EKSPLKPDQKMFHMMIYM 213
+RM S G +PS TY L V + ++ + M LL+E E L+P+ + + I +
Sbjct: 216 KRMISEGLKPSMKTYS---ALMVALGRRRDTGTI-MDLLEEMETLGLRPNIYTYTICIRV 271
Query: 214 YKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSK---IYDQMQRAGLQPD 270
+AG + A + M + G VTY L+ ++ K +Y +M+ + +PD
Sbjct: 272 LGRAGRIDDAYGILKTMEDEGCGPDVVTYTVLIDALCAAGKLDKAKELYTKMRASSHKPD 331
Query: 271 VVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFK 330
+V+Y L++ +G E + EM G P Y IL++A SG VDQA +
Sbjct: 332 LVTYITLMSKFGNYGDLETVKRFWSEMEADGYAPDVVTYTILVEALCKSGKVDQAFDMLD 391
Query: 331 CMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVN 390
MR P++ +Y T++S +N ++ A + F ++ G P +Y I Y K+
Sbjct: 392 VMRVRGIVPNLHTYNTLISGLLNLRRLDEALELFNNMESLGVAPTAYSYVLFIDYYGKLG 451
Query: 391 NLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKN 450
+ EK ++ ++KM+ GI P+ + + + A + ++ +CG PD N
Sbjct: 452 DPEKALDTFEKMKKRGIMPSIAACNASLYSLAEMGRIREAKDIFNDIHNCGLSPDSVTYN 511
Query: 451 ILLSLAKTADERNEANELLGNFNHPNNEPGI 481
+++ A + ++A +LL EP I
Sbjct: 512 MMMKCYSKAGQIDKATKLLTEMLSEGCEPDI 542
Score = 132 bits (333), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 89/381 (23%), Positives = 169/381 (44%), Gaps = 6/381 (1%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
L+ A G++ D +L M G P++ ++T + GR GR +A I + M+ G
Sbjct: 233 LMVALGRRRDTGTIMDLLEEMETLGLRPNIYTYTICIRVLGRAGRIDDAYGILKTMEDEG 292
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
P +TY +++ A K +A+E++ + S KPD + ++ + G E
Sbjct: 293 CGPDVVTYTVLIDALCAAGKLDKAKELYTKM---RASSHKPDLVTYITLMSKFGNYGDLE 349
Query: 222 KARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSKIYDQ---MQRAGLQPDVVSYALLI 278
++ ++ M G VTY L+ +V + +D M+ G+ P++ +Y LI
Sbjct: 350 TVKRFWSEMEADGYAPDVVTYTILVEALCKSGKVDQAFDMLDVMRVRGIVPNLHTYNTLI 409
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCS 338
+ RR +EAL +F M GV PT +Y + +D + G ++A F+ M++
Sbjct: 410 SGLLNLRRLDEALELFNNMESLGVAPTAYSYVLFIDYYGKLGDPEKALDTFEKMKKRGIM 469
Query: 339 PDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEI 398
P I + L + + A+ F + G P+ +TY ++K Y+K ++K ++
Sbjct: 470 PSIAACNASLYSLAEMGRIREAKDIFNDIHNCGLSPDSVTYNMMMKCYSKAGQIDKATKL 529
Query: 399 YDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKT 458
+M G +P+ + +++D K D A + ++ P NIL++
Sbjct: 530 LTEMLSEGCEPDIIVVNSLIDTLYKAGRVDEAWQMFGRLKDLKLAPTVVTYNILITGLGK 589
Query: 459 ADERNEANELLGNFNHPNNEP 479
+ +A +L G+ P
Sbjct: 590 EGKLLKALDLFGSMKESGCPP 610
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 76/309 (24%), Positives = 152/309 (49%), Gaps = 7/309 (2%)
Query: 149 NAEAIFRRMQSS-GPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMF 207
+A+ +F + S G P+ +Y ++ + N + A ++F+ + + + P+ +
Sbjct: 770 DAKKLFDKFTKSLGTHPTPESYNCLMDGLLGCNITEAALKLFVEM---KNAGCCPNIFTY 826
Query: 208 HMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSK---IYDQMQR 264
++++ + K+ ++ +L+ M RG + + +T+N ++S ++K +Y ++
Sbjct: 827 NLLLDAHGKSKRIDELFELYNEMLCRGCKPNIITHNIIISALVKSNSINKALDLYYEIIS 886
Query: 265 AGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQ 324
P +Y LI KA R EEA+ +FEEM D +P YNIL++ F +G V+
Sbjct: 887 GDFSPTPCTYGPLIGGLLKAGRSEEAMKIFEEMPDYQCKPNCAIYNILINGFGKAGNVNI 946
Query: 325 ARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIK 384
A +FK M ++ PD+ SYT ++ ++ A +F LK G P+ ++Y +I
Sbjct: 947 ACDLFKRMIKEGIRPDLKSYTILVECLFMTGRVDDAVHYFEELKLTGLDPDTVSYNLMIN 1006
Query: 385 GYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPP 444
G K LE+ + ++ +M+ GI P + ++ +G D A ++E++ G P
Sbjct: 1007 GLGKSRRLEEALSLFSEMKNRGISPELYTYNALILHFGNAGMVDQAGKMFEELQFMGLEP 1066
Query: 445 DQKAKNILL 453
+ N L+
Sbjct: 1067 NVFTYNALI 1075
Score = 115 bits (287), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 87/362 (24%), Positives = 166/362 (45%), Gaps = 10/362 (2%)
Query: 124 KKGYAPSVVSHTALMEAYGRGGRYKNA-EAIFRRMQSSGPRPSALTY-QIILKLFVEANK 181
KK +P V+ L+ + GR ++A + + + SG + S + +++ + +EA
Sbjct: 674 KKFLSPDHVTLYTLLPGVVKDGRVEDAIKIVMEFVHQSGLQTSNQVWGELMECILIEA-- 731
Query: 182 FKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLF-ALMAERGVQQSTV 240
E EE + + D + +I + K A+KLF G +
Sbjct: 732 --EIEEAISFAEGLVCNSICQDDNLILPLIRVLCKQKKALDAKKLFDKFTKSLGTHPTPE 789
Query: 241 TYNSLMS--FETNYKEVS-KIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEM 297
+YN LM N E + K++ +M+ AG P++ +Y LL++A+GK++R +E ++ EM
Sbjct: 790 SYNCLMDGLLGCNITEAALKLFVEMKNAGCCPNIFTYNLLLDAHGKSKRIDELFELYNEM 849
Query: 298 LDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDM 357
L G +P +NI++ A S +++A ++ + SP C+Y ++ + A
Sbjct: 850 LCRGCKPNIITHNIIISALVKSNSINKALDLYYEIISGDFSPTPCTYGPLIGGLLKAGRS 909
Query: 358 EGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTI 417
E A K F + PN Y LI G+ K N+ +++ +M GI+P+ +T +
Sbjct: 910 EEAMKIFEEMPDYQCKPNCAIYNILINGFGKAGNVNIACDLFKRMIKEGIRPDLKSYTIL 969
Query: 418 MDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNN 477
++ D AV +++E++ G PD + N++++ + EA L +
Sbjct: 970 VECLFMTGRVDDAVHYFEELKLTGLDPDTVSYNLMINGLGKSRRLEEALSLFSEMKNRGI 1029
Query: 478 EP 479
P
Sbjct: 1030 SP 1031
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 93/393 (23%), Positives = 158/393 (40%), Gaps = 44/393 (11%)
Query: 101 MLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSS 160
+LIT GK+G KA + M + G P+ V+ AL++ + A +F RM
Sbjct: 582 ILITGLGKEGKLLKALDLFGSMKESGCPPNTVTFNALLDCLCKNDAVDLALKMFCRMTIM 641
Query: 161 GPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGY 220
P LTY I+ ++ + A + + K L PD + ++ K G
Sbjct: 642 NCSPDVLTYNTIIYGLIKEGRAGYAFWFY----HQMKKFLSPDHVTLYTLLPGVVKDGRV 697
Query: 221 EKARKLFA-LMAERGVQQSTVTYNSLMS---FETNYKEVSKIYDQMQRAGLQPDVVSYAL 276
E A K+ + + G+Q S + LM E +E + + + D
Sbjct: 698 EDAIKIVMEFVHQSGLQTSNQVWGELMECILIEAEIEEAISFAEGLVCNSICQDDNLILP 757
Query: 277 LINAYGKARREEEALAVFEEMLDA-GVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRD 335
LI K ++ +A +F++ + G PT ++YN L+D + + A +F M+
Sbjct: 758 LIRVLCKQKKALDAKKLFDKFTKSLGTHPTPESYNCLMDGLLGCNITEAALKLFVEMKNA 817
Query: 336 RCSPDICSYTTML-----------------------------------SAYVNASDMEGA 360
C P+I +Y +L SA V ++ + A
Sbjct: 818 GCCPNIFTYNLLLDAHGKSKRIDELFELYNEMLCRGCKPNIITHNIIISALVKSNSINKA 877
Query: 361 EKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDA 420
+ + F P TYG LI G K E+ M+I+++M KPN I+ +++
Sbjct: 878 LDLYYEIISGDFSPTPCTYGPLIGGLLKAGRSEEAMKIFEEMPDYQCKPNCAIYNILING 937
Query: 421 YGKNKDFDSAVVWYKEMESCGFPPDQKAKNILL 453
+GK + + A +K M G PD K+ IL+
Sbjct: 938 FGKAGNVNIACDLFKRMIKEGIRPDLKSYTILV 970
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 57/264 (21%), Positives = 131/264 (49%), Gaps = 3/264 (1%)
Query: 221 EKARKLFALMAERGVQQSTVTYNSLMSFETNYK---EVSKIYDQMQRAGLQPDVVSYALL 277
E A KLF M G + TYN L+ K E+ ++Y++M G +P+++++ ++
Sbjct: 805 EAALKLFVEMKNAGCCPNIFTYNLLLDAHGKSKRIDELFELYNEMLCRGCKPNIITHNII 864
Query: 278 INAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRC 337
I+A K+ +AL ++ E++ PT Y L+ +G ++A +F+ M +C
Sbjct: 865 ISALVKSNSINKALDLYYEIISGDFSPTPCTYGPLIGGLLKAGRSEEAMKIFEEMPDYQC 924
Query: 338 SPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMME 397
P+ Y +++ + A ++ A F+R+ ++G P++ +Y L++ ++ +
Sbjct: 925 KPNCAIYNILINGFGKAGNVNIACDLFKRMIKEGIRPDLKSYTILVECLFMTGRVDDAVH 984
Query: 398 IYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAK 457
++++++ G+ P+ + +++ GK++ + A+ + EM++ G P+ N L+
Sbjct: 985 YFEELKLTGLDPDTVSYNLMINGLGKSRRLEEALSLFSEMKNRGISPELYTYNALILHFG 1044
Query: 458 TADERNEANELLGNFNHPNNEPGI 481
A ++A ++ EP +
Sbjct: 1045 NAGMVDQAGKMFEELQFMGLEPNV 1068
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/247 (22%), Positives = 107/247 (43%), Gaps = 11/247 (4%)
Query: 234 GVQQSTVTYNSLMSFETNYKEVSKIYDQMQRAGLQPDVVSYAL-LINAYGKARREEEALA 292
G +S NS +S+ +K VS++ + + P+ +Y L + +G R E+
Sbjct: 94 GALKSISDPNSALSY---FKMVSQLPNIVH----TPETCNYMLEFLRVHG---RVEDMAF 143
Query: 293 VFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYV 352
VF+ M + Y + A +I G + QA MR+ + SY ++ +
Sbjct: 144 VFDLMQKQVINRNPNTYLTIFKALSIKGGIRQAPFALGKMRQAGFVLNAYSYNGLIYFLL 203
Query: 353 NASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQT 412
+ A K ++R+ +G P++ TY L+ + + +M++ ++M G++PN
Sbjct: 204 QPGFCKEALKVYKRMISEGLKPSMKTYSALMVALGRRRDTGTIMDLLEEMETLGLRPNIY 263
Query: 413 IFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNF 472
+T + G+ D A K ME G PD +L+ A + ++A EL
Sbjct: 264 TYTICIRVLGRAGRIDDAYGILKTMEDEGCGPDVVTYTVLIDALCAAGKLDKAKELYTKM 323
Query: 473 NHPNNEP 479
+++P
Sbjct: 324 RASSHKP 330
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/185 (21%), Positives = 84/185 (45%)
Query: 305 THKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFF 364
T + N +L+ + G V+ VF M++ + + +Y T+ A + A
Sbjct: 121 TPETCNYMLEFLRVHGRVEDMAFVFDLMQKQVINRNPNTYLTIFKALSIKGGIRQAPFAL 180
Query: 365 RRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKN 424
+++Q GFV N +Y LI + ++ +++Y +M G+KP+ ++ +M A G+
Sbjct: 181 GKMRQAGFVLNAYSYNGLIYFLLQPGFCKEALKVYKRMISEGLKPSMKTYSALMVALGRR 240
Query: 425 KDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGINGL 484
+D + + +EME+ G P+ I + + A ++A +L P +
Sbjct: 241 RDTGTIMDLLEEMETLGLRPNIYTYTICIRVLGRAGRIDDAYGILKTMEDEGCGPDVVTY 300
Query: 485 SISVD 489
++ +D
Sbjct: 301 TVLID 305
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 54/267 (20%), Positives = 102/267 (38%), Gaps = 38/267 (14%)
Query: 241 TYNSLMSF---ETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEM 297
T N ++ F ++++ ++D MQ+ + + +Y + A +A +M
Sbjct: 124 TCNYMLEFLRVHGRVEDMAFVFDLMQKQVINRNPNTYLTIFKALSIKGGIRQAPFALGKM 183
Query: 298 LDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDM 357
AG +YN L+ G +A V+K M + P + +Y+ ++ A D
Sbjct: 184 RQAGFVLNAYSYNGLIYFLLQPGFCKEALKVYKRMISEGLKPSMKTYSALMVALGRRRDT 243
Query: 358 EGAEKFFRRLKQDGFVPNVITY-----------------------------------GTL 382
++ G PN+ TY L
Sbjct: 244 GTIMDLLEEMETLGLRPNIYTYTICIRVLGRAGRIDDAYGILKTMEDEGCGPDVVTYTVL 303
Query: 383 IKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGF 442
I L+K E+Y KMR + KP+ + T+M +G D ++ ++ EME+ G+
Sbjct: 304 IDALCAAGKLDKAKELYTKMRASSHKPDLVTYITLMSKFGNYGDLETVKRFWSEMEADGY 363
Query: 443 PPDQKAKNILLSLAKTADERNEANELL 469
PD IL+ + + ++A ++L
Sbjct: 364 APDVVTYTILVEALCKSGKVDQAFDML 390
Score = 39.7 bits (91), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 19/68 (27%), Positives = 36/68 (52%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
LI +G G ++A K+ + G P+V ++ AL+ + + G A ++F++M G
Sbjct: 1039 LILHFGNAGMVDQAGKMFEELQFMGLEPNVFTYNALIRGHSKSGNKDRAFSVFKKMMIVG 1098
Query: 162 PRPSALTY 169
P+A T+
Sbjct: 1099 CSPNAGTF 1106
>gi|255661158|gb|ACU25748.1| pentatricopeptide repeat-containing protein [Glandularia
microphylla]
Length = 426
Score = 151 bits (381), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 97/374 (25%), Positives = 183/374 (48%), Gaps = 37/374 (9%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
LI K D++KA + S + + G+ P +V++ A++ +G+ ++ A ++ M+++G
Sbjct: 50 LIELSRKLCDYSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMRTAG 109
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
P+ +Y +L ++VE KF EA VF + E K L D ++MI +Y + G +
Sbjct: 110 VTPNTASYSTLLTMYVENKKFLEALSVFAEM-REIKCLL--DLTTCNIMIDVYGQLGMAK 166
Query: 222 KARKLFALMAERGVQQSTVTYNSLMSFETN---YKEVSKIYDQMQRAGLQPDVVSYALLI 278
+A KLF M + G++ + V+YN+L+ + + E ++ MQR ++ +VV+Y ++
Sbjct: 167 EADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMM 226
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCS 338
YGK E+A + +EM + G+ P Y+ ++ + G +D+A +F+ +R
Sbjct: 227 MIYGKTLEHEKANNLIQEMQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVD 286
Query: 339 PDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVP------------------------ 374
D Y TM+ AY A + A++ LK+ +P
Sbjct: 287 IDQVLYQTMIVAYERAGLVAHAKRLLHELKRPDNIPRDIAIHILAGAGRIEEATWVFRQA 346
Query: 375 -------NVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDF 427
++ + +I ++K ++E++DKMR G P+ + +++AYGK +F
Sbjct: 347 IDAGEVKDITVFERMIHLFSKYKKYGNVVEVFDKMRGLGYFPDSNVIALVLNAYGKLHEF 406
Query: 428 DSAVVWYKEMESCG 441
D A Y EM+ G
Sbjct: 407 DKANDVYMEMQEVG 420
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 85/318 (26%), Positives = 146/318 (45%), Gaps = 38/318 (11%)
Query: 200 LKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFE---TNYKEVS 256
L PD+ + +I + K G ++ A M + V V Y++L+ +Y +
Sbjct: 5 LSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDYSKAI 64
Query: 257 KIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAF 316
I+ +++R+G PD+V+Y +IN +GKA+ EA ++ EM AGV P +Y+ LL +
Sbjct: 65 SIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVTPNTASYSTLLTMY 124
Query: 317 AISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNV 376
+ +A +VF MR +C D+ + M+ Y + A+K F +++ G PNV
Sbjct: 125 VENKKFLEALSVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNV 184
Query: 377 ITYGTLIKGYA---------------KVNNLEK-------MMEIYDK------------- 401
++Y TL++ Y + N+E+ MM IY K
Sbjct: 185 VSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLIQE 244
Query: 402 MRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADE 461
M+ GI+PN ++TI+ +GK D A + ++++ S G DQ ++ + A
Sbjct: 245 MQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVDIDQVLYQTMIVAYERAGL 304
Query: 462 RNEANELLGNFNHPNNEP 479
A LL P+N P
Sbjct: 305 VAHAKRLLHELKRPDNIP 322
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 45/181 (24%), Positives = 79/181 (43%)
Query: 301 GVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGA 360
+ P Y+ L+ F G+ D A + + M +DR D+ Y+ ++ D A
Sbjct: 4 ALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDYSKA 63
Query: 361 EKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDA 420
F RLK+ GF P+++ Y +I + K + + +MR G+ PN ++T++
Sbjct: 64 ISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVTPNTASYSTLLTM 123
Query: 421 YGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPG 480
Y +NK F A+ + EM D NI++ + EA++L EP
Sbjct: 124 YVENKKFLEALSVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPN 183
Query: 481 I 481
+
Sbjct: 184 V 184
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/244 (22%), Positives = 114/244 (46%), Gaps = 6/244 (2%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + + L+ YG F +A + M +K +VV++ ++M YG+ ++ A +
Sbjct: 183 NVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLI 242
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
+ MQ+ G P+++TY I+ ++ + K A +F L S + DQ ++ MI Y
Sbjct: 243 QEMQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKL---RSSGVDIDQVLYQTMIVAY 299
Query: 215 KKAGGYEKARKLFA-LMAERGVQQSTVTYNSLMSFETNYKEVSKIYDQMQRAGLQPDVVS 273
++AG A++L L + + + +++ +E + ++ Q AG D+
Sbjct: 300 ERAGLVAHAKRLLHELKRPDNIPRDIAIH--ILAGAGRIEEATWVFRQAIDAGEVKDITV 357
Query: 274 YALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMR 333
+ +I+ + K ++ + VF++M G P ++L+A+ D+A V+ M+
Sbjct: 358 FERMIHLFSKYKKYGNVVEVFDKMRGLGYFPDSNVIALVLNAYGKLHEFDKANDVYMEMQ 417
Query: 334 RDRC 337
C
Sbjct: 418 EVGC 421
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/123 (22%), Positives = 64/123 (52%)
Query: 333 RRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNL 392
R SPD +Y+T+++ + + A + ++++QD +++ Y LI+ K+ +
Sbjct: 1 RERALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDY 60
Query: 393 EKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNIL 452
K + I+ +++ +G P+ + +++ +GK K F A EM + G P+ + + L
Sbjct: 61 SKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVTPNTASYSTL 120
Query: 453 LSL 455
L++
Sbjct: 121 LTM 123
>gi|357499781|ref|XP_003620179.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495194|gb|AES76397.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 517
Score = 151 bits (381), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 111/421 (26%), Positives = 200/421 (47%), Gaps = 41/421 (9%)
Query: 57 PLPKDL----VLGTLVRLKQLKKWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDF 112
P P ++ +LG+LV+ K +S+ +E+ I+ N ++ +LI ++ + G
Sbjct: 58 PTPPNIEFNKILGSLVKSKHYHTVLYLSQKMEFRGIKP----NLVNCNILINSFCQLGHI 113
Query: 113 NKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQII 172
A VL+ + K GY P+ ++ L++ G+ + I
Sbjct: 114 PSAFSVLTKILKMGYKPNTITLNTLIKGLCLNGKIHDKHCI------------------- 154
Query: 173 LKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAE 232
K K+A ++F ++ E + PD F +++ + K G ++A+ + A+M
Sbjct: 155 ------VGKLKDAVDLFNKMILEN---INPDVYTFTILVDGFCKEGRVKEAKNVLAMMMI 205
Query: 233 RGVQQSTVTYNSLMSFETNYKEVSK---IYDQMQRAGLQPDVVSYALLINAYGKARREEE 289
+G++ VTYNSLM K+V+K I++ M + G+ PD+ SY++LIN + K + +E
Sbjct: 206 QGIKPGVVTYNSLMDGYFLVKQVNKAKSIFNTMAQLGVSPDIQSYSILINGFCKIKMMDE 265
Query: 290 ALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLS 349
A+ + +EM + P Y+ L+D SG + A + M P+I +Y+++L
Sbjct: 266 AMELLKEMHHKQIIPNVVTYSSLIDGLCKSGKISYALKLVDEMHDRGQPPNIVTYSSILD 325
Query: 350 AYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKP 409
A ++ A ++K G PN+ TY LIKG + LE ++++ + V G
Sbjct: 326 ALCKNHQVDNAIALLTQMKNQGIQPNMYTYTILIKGLCQSGKLEDARKVFEDLLVKGHNL 385
Query: 410 NQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKA-KNILLSLAKTADERNEANEL 468
N +T ++ + FD A+ +ME G P+ K + I+LSL K DE A +L
Sbjct: 386 NVYTYTVMIQGFCDKGLFDEALTLLSKMEDNGCIPNAKTYEIIILSLFK-KDENEMAEKL 444
Query: 469 L 469
L
Sbjct: 445 L 445
Score = 132 bits (333), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 77/318 (24%), Positives = 153/318 (48%), Gaps = 16/318 (5%)
Query: 149 NAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFH 208
+A ++F R+ P P + + IL V++ K V E +KP+ +
Sbjct: 45 DAVSLFNRLLQQNPTPPNIEFNKILGSLVKS---KHYHTVLYLSQKMEFRGIKPNLVNCN 101
Query: 209 MMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLM-------------SFETNYKEV 255
++I + + G A + + + G + +T+T N+L+ K+
Sbjct: 102 ILINSFCQLGHIPSAFSVLTKILKMGYKPNTITLNTLIKGLCLNGKIHDKHCIVGKLKDA 161
Query: 256 SKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDA 315
++++M + PDV ++ +L++ + K R +EA V M+ G++P YN L+D
Sbjct: 162 VDLFNKMILENINPDVYTFTILVDGFCKEGRVKEAKNVLAMMMIQGIKPGVVTYNSLMDG 221
Query: 316 FAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPN 375
+ + V++A+++F M + SPDI SY+ +++ + M+ A + + + +PN
Sbjct: 222 YFLVKQVNKAKSIFNTMAQLGVSPDIQSYSILINGFCKIKMMDEAMELLKEMHHKQIIPN 281
Query: 376 VITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYK 435
V+TY +LI G K + +++ D+M G PN +++I+DA KN D+A+
Sbjct: 282 VVTYSSLIDGLCKSGKISYALKLVDEMHDRGQPPNIVTYSSILDALCKNHQVDNAIALLT 341
Query: 436 EMESCGFPPDQKAKNILL 453
+M++ G P+ IL+
Sbjct: 342 QMKNQGIQPNMYTYTILI 359
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 92/364 (25%), Positives = 166/364 (45%), Gaps = 30/364 (8%)
Query: 30 NWRRLMN---QIEEVGSAVAVLRSERTRGQPLPKDLVLGTLVRLKQLK-----KWNVVSE 81
N L+N Q+ + SA +VL G P + L TL++ L K +V +
Sbjct: 99 NCNILINSFCQLGHIPSAFSVLTKILKMGYK-PNTITLNTLIKGLCLNGKIHDKHCIVGK 157
Query: 82 VLEWLRIQSWWDFNEM----------DFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSV 131
+ + + + FN+M F +L+ + K+G +A+ VL+ M +G P V
Sbjct: 158 LKDAVDL-----FNKMILENINPDVYTFTILVDGFCKEGRVKEAKNVLAMMMIQGIKPGV 212
Query: 132 VSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMT 191
V++ +LM+ Y + A++IF M G P +Y I++ F + EA E+
Sbjct: 213 VTYNSLMDGYFLVKQVNKAKSIFNTMAQLGVSPDIQSYSILINGFCKIKMMDEAMEL--- 269
Query: 192 LLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETN 251
L + + P+ + +I K+G A KL M +RG + VTY+S++
Sbjct: 270 LKEMHHKQIIPNVVTYSSLIDGLCKSGKISYALKLVDEMHDRGQPPNIVTYSSILDALCK 329
Query: 252 YKEVSK---IYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKA 308
+V + QM+ G+QP++ +Y +LI ++ + E+A VFE++L G
Sbjct: 330 NHQVDNAIALLTQMKNQGIQPNMYTYTILIKGLCQSGKLEDARKVFEDLLVKGHNLNVYT 389
Query: 309 YNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLK 368
Y +++ F G+ D+A T+ M + C P+ +Y ++ + + E AEK +
Sbjct: 390 YTVMIQGFCDKGLFDEALTLLSKMEDNGCIPNAKTYEIIILSLFKKDENEMAEKLLCEMI 449
Query: 369 QDGF 372
+ F
Sbjct: 450 ETNF 453
Score = 40.0 bits (92), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 24/110 (21%), Positives = 48/110 (43%)
Query: 344 YTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMR 403
Y + + + N +D++ A F RL Q P I + ++ K + ++ + KM
Sbjct: 30 YFSTSTTFHNNNDVDDAVSLFNRLLQQNPTPPNIEFNKILGSLVKSKHYHTVLYLSQKME 89
Query: 404 VNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILL 453
GIKPN +++++ + SA ++ G+ P+ N L+
Sbjct: 90 FRGIKPNLVNCNILINSFCQLGHIPSAFSVLTKILKMGYKPNTITLNTLI 139
>gi|255661188|gb|ACU25763.1| pentatricopeptide repeat-containing protein [Aloysia virgata]
Length = 426
Score = 151 bits (381), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 99/374 (26%), Positives = 182/374 (48%), Gaps = 37/374 (9%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
LI K D++KA + S + + G+ P +V++ A++ +G+ ++ A ++ M+++G
Sbjct: 50 LIELSRKLCDYSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMRTAG 109
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
P+ +Y +L ++VE KF EA VF + + E K L D ++MI +Y + G +
Sbjct: 110 VMPNTASYSTLLTMYVENKKFLEALSVF-SEMREIKCLL--DLTTCNIMIDVYGQLGMAK 166
Query: 222 KARKLFALMAERGVQQSTVTYNSLMSFETN---YKEVSKIYDQMQRAGLQPDVVSYALLI 278
+A KLF M + G++ + V+YN+L+ + + E ++ MQR + +VV+Y ++
Sbjct: 167 EADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIVQNVVTYNSMM 226
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCS 338
YGK E+A + +EM + G+ P Y+ ++ + G +D+A +F+ +R
Sbjct: 227 MIYGKTLEHEKANNLIQEMQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVE 286
Query: 339 PDICSYTTMLSAY-------------------------------VNASDMEGAEKFFRRL 367
D Y TM+ AY A +E A FR+
Sbjct: 287 IDQVLYQTMIVAYERAGLVAHAKRLLHELKSPDNIPRDTAIHILAGAGRIEEATYVFRQA 346
Query: 368 KQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDF 427
G V ++ + +I ++K ++E++DKMR G P+ + +++AYGK +F
Sbjct: 347 IDAGEVKDITVFERMIHLFSKYKKYANLIEVFDKMRGLGYFPDSNVIALVLNAYGKLHEF 406
Query: 428 DSAVVWYKEMESCG 441
D A Y EM+ G
Sbjct: 407 DKANGVYMEMQEVG 420
Score = 125 bits (315), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 84/318 (26%), Positives = 142/318 (44%), Gaps = 38/318 (11%)
Query: 200 LKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFE---TNYKEVS 256
L PD+ + +I + K G ++ A M + V V Y++L+ +Y +
Sbjct: 5 LSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDYSKAI 64
Query: 257 KIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAF 316
I+ +++R+G PD+V+Y +IN +GKA+ EA ++ EM AGV P +Y+ LL +
Sbjct: 65 SIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVMPNTASYSTLLTMY 124
Query: 317 AISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNV 376
+ +A +VF MR +C D+ + M+ Y + A+K F +++ G PNV
Sbjct: 125 VENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNV 184
Query: 377 ITYGTLIKGYA----------------------KVNNLEKMMEIYDK------------- 401
++Y TL++ Y V MM IY K
Sbjct: 185 VSYNTLLRVYGDAELFGEAIHLFRLMQRKNIVQNVVTYNSMMMIYGKTLEHEKANNLIQE 244
Query: 402 MRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADE 461
M+ GI+PN ++TI+ +GK D A + ++++ S G DQ ++ + A
Sbjct: 245 MQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQVLYQTMIVAYERAGL 304
Query: 462 RNEANELLGNFNHPNNEP 479
A LL P+N P
Sbjct: 305 VAHAKRLLHELKSPDNIP 322
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 45/181 (24%), Positives = 79/181 (43%)
Query: 301 GVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGA 360
+ P Y+ L+ F G+ D A + + M +DR D+ Y+ ++ D A
Sbjct: 4 ALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDYSKA 63
Query: 361 EKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDA 420
F RLK+ GF P+++ Y +I + K + + +MR G+ PN ++T++
Sbjct: 64 ISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVMPNTASYSTLLTM 123
Query: 421 YGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPG 480
Y +NK F A+ + EM D NI++ + EA++L EP
Sbjct: 124 YVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPN 183
Query: 481 I 481
+
Sbjct: 184 V 184
Score = 82.0 bits (201), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 56/244 (22%), Positives = 117/244 (47%), Gaps = 6/244 (2%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + + L+ YG F +A + M +K +VV++ ++M YG+ ++ A +
Sbjct: 183 NVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIVQNVVTYNSMMMIYGKTLEHEKANNLI 242
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
+ MQ+ G P+++TY I+ ++ + K A +F L S ++ DQ ++ MI Y
Sbjct: 243 QEMQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKL---RSSGVEIDQVLYQTMIVAY 299
Query: 215 KKAGGYEKARKLFA-LMAERGVQQSTVTYNSLMSFETNYKEVSKIYDQMQRAGLQPDVVS 273
++AG A++L L + + + T + +++ +E + ++ Q AG D+
Sbjct: 300 ERAGLVAHAKRLLHELKSPDNIPRDTAIH--ILAGAGRIEEATYVFRQAIDAGEVKDITV 357
Query: 274 YALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMR 333
+ +I+ + K ++ + VF++M G P ++L+A+ D+A V+ M+
Sbjct: 358 FERMIHLFSKYKKYANLIEVFDKMRGLGYFPDSNVIALVLNAYGKLHEFDKANGVYMEMQ 417
Query: 334 RDRC 337
C
Sbjct: 418 EVGC 421
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/123 (22%), Positives = 65/123 (52%)
Query: 333 RRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNL 392
R+ SPD +Y+T+++ + + A + ++++QD +++ Y LI+ K+ +
Sbjct: 1 RQRALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDY 60
Query: 393 EKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNIL 452
K + I+ +++ +G P+ + +++ +GK K F A EM + G P+ + + L
Sbjct: 61 SKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVMPNTASYSTL 120
Query: 453 LSL 455
L++
Sbjct: 121 LTM 123
Score = 41.2 bits (95), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 24/112 (21%), Positives = 48/112 (42%)
Query: 368 KQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDF 427
+Q P+ TY TLI + K + + KM + + + +++ +++ K D+
Sbjct: 1 RQRALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDY 60
Query: 428 DSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEP 479
A+ + ++ GF PD A N ++++ A EA L+ P
Sbjct: 61 SKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVMP 112
>gi|357494939|ref|XP_003617758.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355519093|gb|AET00717.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 906
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 113/474 (23%), Positives = 211/474 (44%), Gaps = 50/474 (10%)
Query: 58 LPKDLVLGTLV-RLKQLKKWNVVSEVLEWL----RIQSWWDFNEMDFLMLITAYGKQGDF 112
+P D+ TL+ L + ++ + E+ E L + + +N M I YG G F
Sbjct: 305 VPDDVTYTTLIGVLCKARRLDEAVELFEELDLNRSVPCVYAYNTM-----IMGYGSAGKF 359
Query: 113 NKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNA---------------------- 150
++A +L +KG PSV+++ ++ GR G+ + A
Sbjct: 360 DEAYSLLERQKRKGCIPSVIAYNCILTCLGRKGKVEEALRIHDEMRQDAAPNLTTYNILI 419
Query: 151 ---------EAIFR---RMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKS 198
EA + M+ +G P+ +T I++ +A K EA +F+ L +
Sbjct: 420 DMLCKAGELEAALKVQDTMKEAGLFPNIMTVNIMIDRLCKAQKLDEACSIFLGL---DHK 476
Query: 199 PLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMS--FETNYKE-V 255
PD + F +I + G + A L+ M + + V Y SL+ F+ KE
Sbjct: 477 VCSPDSRTFCSLIDGLGRRGRVDDAYSLYEKMLDSDQIPNVVVYTSLIQNFFKCGRKEDG 536
Query: 256 SKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDA 315
KIY +M G PD++ ++ KA E+ A+FEE+ G+ P ++Y+IL+
Sbjct: 537 HKIYKEMVHRGCSPDLMLLNSYMDCVFKAGEVEKGRALFEEIKAQGLVPDVRSYSILIHG 596
Query: 316 FAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPN 375
+G + +F M+ D+ +Y T++ + + ++ A + +K G P
Sbjct: 597 LVKAGFSRETYKLFYEMKEQGLHLDVLAYNTVIDGFCKSGKVDKAYQLLEEMKTKGLQPT 656
Query: 376 VITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYK 435
V+TYG+++ G AK++ L++ ++++ + G+ N I+++++D +GK D A + +
Sbjct: 657 VVTYGSVVDGLAKIDRLDEAYMLFEEAKSIGVDLNVVIYSSLIDGFGKVGRIDEAYLILE 716
Query: 436 EMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGINGLSISVD 489
E+ G P+ N LL A+E +EA N + P SI ++
Sbjct: 717 ELMQKGLTPNSYTWNCLLDALVKAEEIDEAQVCFQNMKNLKCSPNAMTYSIMIN 770
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 95/375 (25%), Positives = 187/375 (49%), Gaps = 8/375 (2%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + + LI + K G K+ M +G +P ++ + M+ + G + A+F
Sbjct: 516 NVVVYTSLIQNFFKCGRKEDGHKIYKEMVHRGCSPDLMLLNSYMDCVFKAGEVEKGRALF 575
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
+++ G P +Y I++ V+A +E ++F + ++ L D ++ +I +
Sbjct: 576 EEIKAQGLVPDVRSYSILIHGLVKAGFSRETYKLFYEM---KEQGLHLDVLAYNTVIDGF 632
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSL---MSFETNYKEVSKIYDQMQRAGLQPDV 271
K+G +KA +L M +G+Q + VTY S+ ++ E ++++ + G+ +V
Sbjct: 633 CKSGKVDKAYQLLEEMKTKGLQPTVVTYGSVVDGLAKIDRLDEAYMLFEEAKSIGVDLNV 692
Query: 272 VSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKC 331
V Y+ LI+ +GK R +EA + EE++ G+ P +N LLDA + +D+A+ F+
Sbjct: 693 VIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNSYTWNCLLDALVKAEEIDEAQVCFQN 752
Query: 332 MRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNN 391
M+ +CSP+ +Y+ M++ A F++ +++ G PN ITY T+I G AK N
Sbjct: 753 MKNLKCSPNAMTYSIMINGLCMIRKFNKAFVFWQEMQKQGLKPNNITYTTMIAGLAKAGN 812
Query: 392 LEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGK-NKDFDSAVVWYKEMESCGFPPDQKAKN 450
+ + ++D+ + +G P+ + +++ NK D+ +V ++E G + K
Sbjct: 813 VMEARGLFDRFKASGGVPDSACYNAMIEGLSSANKAMDAYIV-FEETRLKGCRVNSKTCV 871
Query: 451 ILLSLAKTADERNEA 465
+LL AD +A
Sbjct: 872 VLLDALHKADCLEQA 886
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 94/371 (25%), Positives = 179/371 (48%), Gaps = 8/371 (2%)
Query: 99 FLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQ 158
F LI G++G + A + M P+VV +T+L++ + + GR ++ I++ M
Sbjct: 485 FCSLIDGLGRRGRVDDAYSLYEKMLDSDQIPNVVVYTSLIQNFFKCGRKEDGHKIYKEMV 544
Query: 159 SSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSP-LKPDQKMFHMMIYMYKKA 217
G P + + +A + ++ +F +E K+ L PD + + ++I+ KA
Sbjct: 545 HRGCSPDLMLLNSYMDCVFKAGEVEKGRALF----EEIKAQGLVPDVRSYSILIHGLVKA 600
Query: 218 GGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSKIY---DQMQRAGLQPDVVSY 274
G + KLF M E+G+ + YN+++ +V K Y ++M+ GLQP VV+Y
Sbjct: 601 GFSRETYKLFYEMKEQGLHLDVLAYNTVIDGFCKSGKVDKAYQLLEEMKTKGLQPTVVTY 660
Query: 275 ALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRR 334
+++ K R +EA +FEE GV Y+ L+D F G +D+A + + + +
Sbjct: 661 GSVVDGLAKIDRLDEAYMLFEEAKSIGVDLNVVIYSSLIDGFGKVGRIDEAYLILEELMQ 720
Query: 335 DRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEK 394
+P+ ++ +L A V A +++ A+ F+ +K PN +TY +I G + K
Sbjct: 721 KGLTPNSYTWNCLLDALVKAEEIDEAQVCFQNMKNLKCSPNAMTYSIMINGLCMIRKFNK 780
Query: 395 MMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLS 454
+ +M+ G+KPN +TT++ K + A + ++ G PD N ++
Sbjct: 781 AFVFWQEMQKQGLKPNNITYTTMIAGLAKAGNVMEARGLFDRFKASGGVPDSACYNAMIE 840
Query: 455 LAKTADERNEA 465
+A++ +A
Sbjct: 841 GLSSANKAMDA 851
Score = 142 bits (359), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 89/365 (24%), Positives = 177/365 (48%), Gaps = 7/365 (1%)
Query: 92 WDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAE 151
++ N F L+ + ++G + A +L M + +V + ++ +G+ G+ A
Sbjct: 234 YEANVHLFTTLVRVFAREGRIDAALSLLDEMKSNSFTADLVLYNVCIDCFGKVGKVDMAW 293
Query: 152 AIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMI 211
F M++ G P +TY ++ + +A + EA E+F LD +S P ++ MI
Sbjct: 294 KFFHEMKAQGLVPDDVTYTTLIGVLCKARRLDEAVELFEE-LDLNRSV--PCVYAYNTMI 350
Query: 212 YMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSF---ETNYKEVSKIYDQMQRAGLQ 268
Y AG +++A L +G S + YN +++ + +E +I+D+M R
Sbjct: 351 MGYGSAGKFDEAYSLLERQKRKGCIPSVIAYNCILTCLGRKGKVEEALRIHDEM-RQDAA 409
Query: 269 PDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTV 328
P++ +Y +LI+ KA E AL V + M +AG+ P NI++D + +D+A ++
Sbjct: 410 PNLTTYNILIDMLCKAGELEAALKVQDTMKEAGLFPNIMTVNIMIDRLCKAQKLDEACSI 469
Query: 329 FKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAK 388
F + CSPD ++ +++ ++ A + ++ +PNV+ Y +LI+ + K
Sbjct: 470 FLGLDHKVCSPDSRTFCSLIDGLGRRGRVDDAYSLYEKMLDSDQIPNVVVYTSLIQNFFK 529
Query: 389 VNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKA 448
E +IY +M G P+ + + MD K + + ++E+++ G PD ++
Sbjct: 530 CGRKEDGHKIYKEMVHRGCSPDLMLLNSYMDCVFKAGEVEKGRALFEEIKAQGLVPDVRS 589
Query: 449 KNILL 453
+IL+
Sbjct: 590 YSILI 594
Score = 119 bits (298), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 81/388 (20%), Positives = 178/388 (45%), Gaps = 6/388 (1%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N M ++I K ++A + ++ K +P + +L++ GR GR +A +++
Sbjct: 446 NIMTVNIMIDRLCKAQKLDEACSIFLGLDHKVCSPDSRTFCSLIDGLGRRGRVDDAYSLY 505
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
+M S P+ + Y +++ F + + ++ +++ ++ SP D + + +
Sbjct: 506 EKMLDSDQIPNVVVYTSLIQNFFKCGRKEDGHKIYKEMVHRGCSP---DLMLLNSYMDCV 562
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSLMS--FETNY-KEVSKIYDQMQRAGLQPDV 271
KAG EK R LF + +G+ +Y+ L+ + + +E K++ +M+ GL DV
Sbjct: 563 FKAGEVEKGRALFEEIKAQGLVPDVRSYSILIHGLVKAGFSRETYKLFYEMKEQGLHLDV 622
Query: 272 VSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKC 331
++Y +I+ + K+ + ++A + EEM G++PT Y ++D A +D+A +F+
Sbjct: 623 LAYNTVIDGFCKSGKVDKAYQLLEEMKTKGLQPTVVTYGSVVDGLAKIDRLDEAYMLFEE 682
Query: 332 MRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNN 391
+ ++ Y++++ + ++ A L Q G PN T+ L+ K
Sbjct: 683 AKSIGVDLNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNSYTWNCLLDALVKAEE 742
Query: 392 LEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNI 451
+++ + M+ PN ++ +++ + F+ A V+++EM+ G P+
Sbjct: 743 IDEAQVCFQNMKNLKCSPNAMTYSIMINGLCMIRKFNKAFVFWQEMQKQGLKPNNITYTT 802
Query: 452 LLSLAKTADERNEANELLGNFNHPNNEP 479
+++ A EA L F P
Sbjct: 803 MIAGLAKAGNVMEARGLFDRFKASGGVP 830
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 88/383 (22%), Positives = 169/383 (44%), Gaps = 11/383 (2%)
Query: 70 LKQLKKWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAP 129
+K+LK NV + W+ ++ + + + + + E++L M+ G+
Sbjct: 107 MKRLKDVNVAFQYFRWVERKTQQAHCPEVYNAFLMVMARTRNLDYLEQILEEMSVAGFGL 166
Query: 130 SVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVF 189
S L+ ++ + + K A + M+ RP+ Y ++ AN+ +
Sbjct: 167 SNHVSVELVASFVKSHKLKEAFGVIEMMRKFKFRPAFSAYTTLIGALSAANR----PDPM 222
Query: 190 MTLLDE-EKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSF 248
+TL + ++ + + +F ++ ++ + G + A L M V YN +
Sbjct: 223 LTLFHQMQEIGYEANVHLFTTLVRVFAREGRIDAALSLLDEMKSNSFTADLVLYNVCIDC 282
Query: 249 ETNYKEVS---KIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEM-LDAGVRP 304
+V K + +M+ GL PD V+Y LI KARR +EA+ +FEE+ L+ V P
Sbjct: 283 FGKVGKVDMAWKFFHEMKAQGLVPDDVTYTTLIGVLCKARRLDEAVELFEELDLNRSV-P 341
Query: 305 THKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFF 364
AYN ++ + +G D+A ++ + +R C P + +Y +L+ +E A +
Sbjct: 342 CVYAYNTMIMGYGSAGKFDEAYSLLERQKRKGCIPSVIAYNCILTCLGRKGKVEEALRIH 401
Query: 365 RRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKN 424
++QD PN+ TY LI K LE +++ D M+ G+ PN ++D K
Sbjct: 402 DEMRQDA-APNLTTYNILIDMLCKAGELEAALKVQDTMKEAGLFPNIMTVNIMIDRLCKA 460
Query: 425 KDFDSAVVWYKEMESCGFPPDQK 447
+ D A + ++ PD +
Sbjct: 461 QKLDEACSIFLGLDHKVCSPDSR 483
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 94/202 (46%)
Query: 253 KEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNIL 312
KE + + M++ +P +Y LI A A R + L +F +M + G + L
Sbjct: 185 KEAFGVIEMMRKFKFRPAFSAYTTLIGALSAANRPDPMLTLFHQMQEIGYEANVHLFTTL 244
Query: 313 LDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGF 372
+ FA G +D A ++ M+ + + D+ Y + + ++ A KFF +K G
Sbjct: 245 VRVFAREGRIDAALSLLDEMKSNSFTADLVLYNVCIDCFGKVGKVDMAWKFFHEMKAQGL 304
Query: 373 VPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVV 432
VP+ +TY TLI K L++ +E+++++ +N P + T++ YG FD A
Sbjct: 305 VPDDVTYTTLIGVLCKARRLDEAVELFEELDLNRSVPCVYAYNTMIMGYGSAGKFDEAYS 364
Query: 433 WYKEMESCGFPPDQKAKNILLS 454
+ + G P A N +L+
Sbjct: 365 LLERQKRKGCIPSVIAYNCILT 386
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 56/232 (24%), Positives = 100/232 (43%), Gaps = 1/232 (0%)
Query: 258 IYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFA 317
++ QMQ G + +V + L+ + + R + AL++ +EM YN+ +D F
Sbjct: 225 LFHQMQEIGYEANVHLFTTLVRVFAREGRIDAALSLLDEMKSNSFTADLVLYNVCIDCFG 284
Query: 318 ISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVI 377
G VD A F M+ PD +YTT++ A ++ A + F L + VP V
Sbjct: 285 KVGKVDMAWKFFHEMKAQGLVPDDVTYTTLIGVLCKARRLDEAVELFEELDLNRSVPCVY 344
Query: 378 TYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEM 437
Y T+I GY ++ + ++ + G P+ + I+ G+ + A+ + EM
Sbjct: 345 AYNTMIMGYGSAGKFDEAYSLLERQKRKGCIPSVIAYNCILTCLGRKGKVEEALRIHDEM 404
Query: 438 ESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGINGLSISVD 489
P+ NIL+ + A E A ++ P I ++I +D
Sbjct: 405 RQ-DAAPNLTTYNILIDMLCKAGELEAALKVQDTMKEAGLFPNIMTVNIMID 455
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/244 (22%), Positives = 110/244 (45%), Gaps = 5/244 (2%)
Query: 231 AERGVQQSTV--TYNS---LMSFETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKAR 285
ER QQ+ YN+ +M+ N + +I ++M AG L+ ++ K+
Sbjct: 123 VERKTQQAHCPEVYNAFLMVMARTRNLDYLEQILEEMSVAGFGLSNHVSVELVASFVKSH 182
Query: 286 REEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYT 345
+ +EA V E M RP AY L+ A + + D T+F M+ ++ +T
Sbjct: 183 KLKEAFGVIEMMRKFKFRPAFSAYTTLIGALSAANRPDPMLTLFHQMQEIGYEANVHLFT 242
Query: 346 TMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVN 405
T++ + ++ A +K + F +++ Y I + KV ++ + + +M+
Sbjct: 243 TLVRVFAREGRIDAALSLLDEMKSNSFTADLVLYNVCIDCFGKVGKVDMAWKFFHEMKAQ 302
Query: 406 GIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEA 465
G+ P+ +TT++ K + D AV ++E++ P A N ++ +A + +EA
Sbjct: 303 GLVPDDVTYTTLIGVLCKARRLDEAVELFEELDLNRSVPCVYAYNTMIMGYGSAGKFDEA 362
Query: 466 NELL 469
LL
Sbjct: 363 YSLL 366
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 62/270 (22%), Positives = 115/270 (42%), Gaps = 41/270 (15%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSH--------------------------- 134
+I + K G +KA ++L M KG P+VV++
Sbjct: 628 VIDGFCKSGKVDKAYQLLEEMKTKGLQPTVVTYGSVVDGLAKIDRLDEAYMLFEEAKSIG 687
Query: 135 --------TALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAE 186
++L++ +G+ GR A I + G P++ T+ +L V+A + EA+
Sbjct: 688 VDLNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNSYTWNCLLDALVKAEEIDEAQ 747
Query: 187 EVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSL- 245
F + + + SP + + +MI + KA + M ++G++ + +TY ++
Sbjct: 748 VCFQNMKNLKCSP---NAMTYSIMINGLCMIRKFNKAFVFWQEMQKQGLKPNNITYTTMI 804
Query: 246 --MSFETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVR 303
++ N E ++D+ + +G PD Y +I A + +A VFEE G R
Sbjct: 805 AGLAKAGNVMEARGLFDRFKASGGVPDSACYNAMIEGLSSANKAMDAYIVFEETRLKGCR 864
Query: 304 PTHKAYNILLDAFAISGMVDQARTVFKCMR 333
K +LLDA + ++QA V +R
Sbjct: 865 VNSKTCVVLLDALHKADCLEQAAIVGAVLR 894
>gi|357141282|ref|XP_003572167.1| PREDICTED: pentatricopeptide repeat-containing protein At5g12100,
mitochondrial-like [Brachypodium distachyon]
Length = 686
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 102/412 (24%), Positives = 185/412 (44%), Gaps = 41/412 (9%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + + +I + K+GD ++ S M + G P+V+++ L+ R GR A+
Sbjct: 222 NHITYNTMIDGHIKKGDLESGFRLWSQMLRHGLKPNVITYNVLLSGLCRAGRMGETAAVL 281
Query: 155 RRMQSSGPRPSALTYQII-------------LKLFVEA---------------------- 179
M S P TY I+ L LF E+
Sbjct: 282 DEMASRKMVPDGFTYSILFDGHSRTGDSQTMLSLFEESVKKGVKIGAYTCSILLNGLCKD 341
Query: 180 NKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQST 239
K +AEEV TL++ S L +++ +I Y + G E A +F M R ++
Sbjct: 342 GKISKAEEVLQTLVN---SGLLQTTVIYNTLINGYCQIGDLEGAFSIFQQMKSRLIRPDH 398
Query: 240 VTYNSLMSFETNYKEVSKIYD---QMQRAGLQPDVVSYALLINAYGKARREEEALAVFEE 296
+TYN+L++ + +++ +D +M++ G+ P V ++ LI+AYG+A + E+ + +
Sbjct: 399 ITYNALINGLGKVERITEAHDLVIEMEKNGVNPSVETFNTLIDAYGRAGQLEKCFIILSD 458
Query: 297 MLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASD 356
M + G++P +Y +++AF +G + +A + M P Y ++ AY+
Sbjct: 459 MQEKGLKPNVVSYGSIVNAFCKNGKILEAVAILDDMFIKDVLPGAQVYNAIIDAYIECGS 518
Query: 357 MEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTT 416
+ A ++K G P+++TY LIKG K + + + E+ D +R G+ P+ + T
Sbjct: 519 TDQAFMLAEKMKSSGVPPSIVTYNLLIKGLCKQSQISEAEELLDSLRNYGLAPDVISYNT 578
Query: 417 IMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANEL 468
++ A + D A+ KEM CG P + +L S A +E L
Sbjct: 579 LISACCYRSNTDRALELEKEMWKCGIKPSPRTYRMLFSSLGGAGRVHEMENL 630
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 91/391 (23%), Positives = 183/391 (46%), Gaps = 8/391 (2%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + ++I K G A K+ M +K P+ +++ +++ + + G ++ ++
Sbjct: 187 NAFSYNVVIAGLWKAGTDCDAVKLFDEMPEKAVVPNHITYNTMIDGHIKKGDLESGFRLW 246
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKS-PLKPDQKMFHMMIYM 213
+M G +P+ +TY ++L A + E V LDE S + PD + ++
Sbjct: 247 SQMLRHGLKPNVITYNVLLSGLCRAGRMGETAAV----LDEMASRKMVPDGFTYSILFDG 302
Query: 214 YKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSKIYDQMQ---RAGLQPD 270
+ + G + LF ++GV+ T + L++ ++SK + +Q +GL
Sbjct: 303 HSRTGDSQTMLSLFEESVKKGVKIGAYTCSILLNGLCKDGKISKAEEVLQTLVNSGLLQT 362
Query: 271 VVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFK 330
V Y LIN Y + E A ++F++M +RP H YN L++ + +A +
Sbjct: 363 TVIYNTLINGYCQIGDLEGAFSIFQQMKSRLIRPDHITYNALINGLGKVERITEAHDLVI 422
Query: 331 CMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVN 390
M ++ +P + ++ T++ AY A +E +++ G PNV++YG+++ + K
Sbjct: 423 EMEKNGVNPSVETFNTLIDAYGRAGQLEKCFIILSDMQEKGLKPNVVSYGSIVNAFCKNG 482
Query: 391 NLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKN 450
+ + + I D M + + P ++ I+DAY + D A + ++M+S G PP N
Sbjct: 483 KILEAVAILDDMFIKDVLPGAQVYNAIIDAYIECGSTDQAFMLAEKMKSSGVPPSIVTYN 542
Query: 451 ILLSLAKTADERNEANELLGNFNHPNNEPGI 481
+L+ + +EA ELL + + P +
Sbjct: 543 LLIKGLCKQSQISEAEELLDSLRNYGLAPDV 573
Score = 135 bits (339), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 90/345 (26%), Positives = 166/345 (48%), Gaps = 6/345 (1%)
Query: 101 MLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSS 160
+L+ K G +KAE+VL + G + V + L+ Y + G + A +IF++M+S
Sbjct: 333 ILLNGLCKDGKISKAEEVLQTLVNSGLLQTTVIYNTLINGYCQIGDLEGAFSIFQQMKSR 392
Query: 161 GPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGY 220
RP +TY ++ + + EA ++ +++ EK+ + P + F+ +I Y +AG
Sbjct: 393 LIRPDHITYNALINGLGKVERITEAHDL---VIEMEKNGVNPSVETFNTLIDAYGRAGQL 449
Query: 221 EKARKLFALMAERGVQQSTVTYNSLM-SFETNYK--EVSKIYDQMQRAGLQPDVVSYALL 277
EK + + M E+G++ + V+Y S++ +F N K E I D M + P Y +
Sbjct: 450 EKCFIILSDMQEKGLKPNVVSYGSIVNAFCKNGKILEAVAILDDMFIKDVLPGAQVYNAI 509
Query: 278 INAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRC 337
I+AY + ++A + E+M +GV P+ YN+L+ + +A + +R
Sbjct: 510 IDAYIECGSTDQAFMLAEKMKSSGVPPSIVTYNLLIKGLCKQSQISEAEELLDSLRNYGL 569
Query: 338 SPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMME 397
+PD+ SY T++SA S+ + A + + + + G P+ TY L + +M
Sbjct: 570 APDVISYNTLISACCYRSNTDRALELEKEMWKCGIKPSPRTYRMLFSSLGGAGRVHEMEN 629
Query: 398 IYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGF 442
+Y +M + P I+ ++DAY K + KEM G
Sbjct: 630 LYQQMLDKDVVPCSGIYNIMVDAYAKCGEESKVEALRKEMSDKGI 674
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 80/341 (23%), Positives = 149/341 (43%), Gaps = 44/341 (12%)
Query: 145 GRYKNAEAIF-----------------------------------RRMQSSG-PRPSALT 168
GR+ + F RRM G P P+A +
Sbjct: 131 GRHADVRGAFELLVAARARPDTFTWNKAVQACVVAGDLDEAVGMLRRMGCDGAPAPNAFS 190
Query: 169 YQIILKLFVEANKFKEAEEVFMTLLDE-EKSPLKPDQKMFHMMIYMYKKAGGYEKARKLF 227
Y +++ +A +A ++F DE + + P+ ++ MI + K G E +L+
Sbjct: 191 YNVVIAGLWKAGTDCDAVKLF----DEMPEKAVVPNHITYNTMIDGHIKKGDLESGFRLW 246
Query: 228 ALMAERGVQQSTVTYNSLMSFET---NYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKA 284
+ M G++ + +TYN L+S E + + D+M + PD +Y++L + + +
Sbjct: 247 SQMLRHGLKPNVITYNVLLSGLCRAGRMGETAAVLDEMASRKMVPDGFTYSILFDGHSRT 306
Query: 285 RREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSY 344
+ L++FEE + GV+ +ILL+ G + +A V + + Y
Sbjct: 307 GDSQTMLSLFEESVKKGVKIGAYTCSILLNGLCKDGKISKAEEVLQTLVNSGLLQTTVIY 366
Query: 345 TTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRV 404
T+++ Y D+EGA F+++K P+ ITY LI G KV + + ++ +M
Sbjct: 367 NTLINGYCQIGDLEGAFSIFQQMKSRLIRPDHITYNALINGLGKVERITEAHDLVIEMEK 426
Query: 405 NGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPD 445
NG+ P+ F T++DAYG+ + + +M+ G P+
Sbjct: 427 NGVNPSVETFNTLIDAYGRAGQLEKCFIILSDMQEKGLKPN 467
>gi|242092154|ref|XP_002436567.1| hypothetical protein SORBIDRAFT_10g004910 [Sorghum bicolor]
gi|241914790|gb|EER87934.1| hypothetical protein SORBIDRAFT_10g004910 [Sorghum bicolor]
Length = 492
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 94/348 (27%), Positives = 182/348 (52%), Gaps = 7/348 (2%)
Query: 75 KWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSH 134
+W+ +V E +R Q W+ ++ LIT GK KA ++ M +G AP++ S+
Sbjct: 120 RWDSALKVFELMRDQVWYRPYIGIYIKLITMLGKCKKPEKAHELFQAMIDEGCAPNLESY 179
Query: 135 TALMEAYGRGGRYKNAEAIFRRMQ-SSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLL 193
TAL+ AY R GR+ A + RM+ + G +P TY I++K + A F E+V L
Sbjct: 180 TALVSAYSRSGRFHEAFNLLDRMKDTPGCQPDVKTYSILIKSCLHAYDF---EKVKSLLT 236
Query: 194 DEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNS-LMSFETN- 251
D ++ ++P+ ++ +I Y KA + + M + + T NS L +F ++
Sbjct: 237 DMARAGIRPNTVTYNTLIDAYGKARRFPEMESTLLKMLSQNCKPDIWTMNSTLRAFGSSG 296
Query: 252 -YKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYN 310
+ + Y++ Q +G+ P++ +Y +L+++YGKA+ E+ AV E M T YN
Sbjct: 297 QIETMESCYEKFQASGIVPNIKTYNILLDSYGKAKMYEKMGAVMEYMQKYYYSWTIVTYN 356
Query: 311 ILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQD 370
+++DAF +G ++Q +F+ M+ +R P+ + +++ AY A +++ + R ++
Sbjct: 357 VVIDAFGRAGDLEQMEYIFRLMKSERIKPNCVTLCSVVRAYGRAGEVKKIKTVLRIVENS 416
Query: 371 GFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIM 418
+++ + L+ Y +V L +M +I D M+ + KP++ T++
Sbjct: 417 DITLDIVFFNCLVDAYGRVGCLAEMWDILDLMKEHRCKPDKVTCATMI 464
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 81/318 (25%), Positives = 158/318 (49%), Gaps = 10/318 (3%)
Query: 112 FNKAEKVLSFM-NKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQ 170
++ A KV M ++ Y P + + L+ G+ + + A +F+ M G P+ +Y
Sbjct: 121 WDSALKVFELMRDQVWYRPYIGIYIKLITMLGKCKKPEKAHELFQAMIDEGCAPNLESYT 180
Query: 171 IILKLFVEANKFKEAEEVFMTLLDEEK-SP-LKPDQKMFHMMIYMYKKAGGYEKARKLFA 228
++ + + +F EA LLD K +P +PD K + ++I A +EK + L
Sbjct: 181 ALVSAYSRSGRFHEA----FNLLDRMKDTPGCQPDVKTYSILIKSCLHAYDFEKVKSLLT 236
Query: 229 LMAERGVQQSTVTYNSLMSF---ETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKAR 285
MA G++ +TVTYN+L+ + E+ +M +PD+ + + A+G +
Sbjct: 237 DMARAGIRPNTVTYNTLIDAYGKARRFPEMESTLLKMLSQNCKPDIWTMNSTLRAFGSSG 296
Query: 286 REEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYT 345
+ E + +E+ +G+ P K YNILLD++ + M ++ V + M++ S I +Y
Sbjct: 297 QIETMESCYEKFQASGIVPNIKTYNILLDSYGKAKMYEKMGAVMEYMQKYYYSWTIVTYN 356
Query: 346 TMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVN 405
++ A+ A D+E E FR +K + PN +T ++++ Y + ++K+ + + +
Sbjct: 357 VVIDAFGRAGDLEQMEYIFRLMKSERIKPNCVTLCSVVRAYGRAGEVKKIKTVLRIVENS 416
Query: 406 GIKPNQTIFTTIMDAYGK 423
I + F ++DAYG+
Sbjct: 417 DITLDIVFFNCLVDAYGR 434
Score = 111 bits (278), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 73/283 (25%), Positives = 139/283 (49%), Gaps = 8/283 (2%)
Query: 146 RYKNAEAIFRRMQSS-GPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQ 204
R+ +A +F M+ RP Y ++ + + K ++A E+F ++DE +P +
Sbjct: 120 RWDSALKVFELMRDQVWYRPYIGIYIKLITMLGKCKKPEKAHELFQAMIDEGCAP---NL 176
Query: 205 KMFHMMIYMYKKAGGYEKARKLFALMAER-GVQQSTVTYNSLMS---FETNYKEVSKIYD 260
+ + ++ Y ++G + +A L M + G Q TY+ L+ ++++V +
Sbjct: 177 ESYTALVSAYSRSGRFHEAFNLLDRMKDTPGCQPDVKTYSILIKSCLHAYDFEKVKSLLT 236
Query: 261 QMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISG 320
M RAG++P+ V+Y LI+AYGKARR E + +ML +P N L AF SG
Sbjct: 237 DMARAGIRPNTVTYNTLIDAYGKARRFPEMESTLLKMLSQNCKPDIWTMNSTLRAFGSSG 296
Query: 321 MVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYG 380
++ + ++ + P+I +Y +L +Y A E +++ + ++TY
Sbjct: 297 QIETMESCYEKFQASGIVPNIKTYNILLDSYGKAKMYEKMGAVMEYMQKYYYSWTIVTYN 356
Query: 381 TLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGK 423
+I + + +LE+M I+ M+ IKPN +++ AYG+
Sbjct: 357 VVIDAFGRAGDLEQMEYIFRLMKSERIKPNCVTLCSVVRAYGR 399
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 100/199 (50%), Gaps = 2/199 (1%)
Query: 257 KIYDQMQ-RAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDA 315
K+++ M+ + +P + Y LI GK ++ E+A +F+ M+D G P ++Y L+ A
Sbjct: 126 KVFELMRDQVWYRPYIGIYIKLITMLGKCKKPEKAHELFQAMIDEGCAPNLESYTALVSA 185
Query: 316 FAISGMVDQARTVFKCMR-RDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVP 374
++ SG +A + M+ C PD+ +Y+ ++ + ++A D E + + + G P
Sbjct: 186 YSRSGRFHEAFNLLDRMKDTPGCQPDVKTYSILIKSCLHAYDFEKVKSLLTDMARAGIRP 245
Query: 375 NVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWY 434
N +TY TLI Y K +M KM KP+ + + A+G + ++ Y
Sbjct: 246 NTVTYNTLIDAYGKARRFPEMESTLLKMLSQNCKPDIWTMNSTLRAFGSSGQIETMESCY 305
Query: 435 KEMESCGFPPDQKAKNILL 453
++ ++ G P+ K NILL
Sbjct: 306 EKFQASGIVPNIKTYNILL 324
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 89/209 (42%), Gaps = 2/209 (0%)
Query: 284 ARREEEALAVFEEMLD-AGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDIC 342
A R + AL VFE M D RP Y L+ ++A +F+ M + C+P++
Sbjct: 118 ALRWDSALKVFELMRDQVWYRPYIGIYIKLITMLGKCKKPEKAHELFQAMIDEGCAPNLE 177
Query: 343 SYTTMLSAYVNASDMEGAEKFFRRLK-QDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDK 401
SYT ++SAY + A R+K G P+V TY LIK + EK+ +
Sbjct: 178 SYTALVSAYSRSGRFHEAFNLLDRMKDTPGCQPDVKTYSILIKSCLHAYDFEKVKSLLTD 237
Query: 402 MRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADE 461
M GI+PN + T++DAYGK + F +M S PD N L ++ +
Sbjct: 238 MARAGIRPNTVTYNTLIDAYGKARRFPEMESTLLKMLSQNCKPDIWTMNSTLRAFGSSGQ 297
Query: 462 RNEANELLGNFNHPNNEPGINGLSISVDE 490
F P I +I +D
Sbjct: 298 IETMESCYEKFQASGIVPNIKTYNILLDS 326
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/233 (23%), Positives = 107/233 (45%), Gaps = 6/233 (2%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + + LI AYGK F + E L M + P + + + + A+G G+ + E+ +
Sbjct: 246 NTVTYNTLIDAYGKARRFPEMESTLLKMLSQNCKPDIWTMNSTLRAFGSSGQIETMESCY 305
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
+ Q+SG P+ TY I+L + +A +++ V + +K ++++I +
Sbjct: 306 EKFQASGIVPNIKTYNILLDSYGKAKMYEKMGAVMEYM---QKYYYSWTIVTYNVVIDAF 362
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSKIYDQM---QRAGLQPDV 271
+AG E+ +F LM ++ + VT S++ EV KI + + + + D+
Sbjct: 363 GRAGDLEQMEYIFRLMKSERIKPNCVTLCSVVRAYGRAGEVKKIKTVLRIVENSDITLDI 422
Query: 272 VSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQ 324
V + L++AYG+ E + + M + +P ++ F I G+ D
Sbjct: 423 VFFNCLVDAYGRVGCLAEMWDILDLMKEHRCKPDKVTCATMIKWFLIKGIDDH 475
>gi|410110059|gb|AFV61109.1| pentatricopeptide repeat-containing protein 123, partial
[Acantholippia salsoloides]
Length = 433
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 100/374 (26%), Positives = 180/374 (48%), Gaps = 37/374 (9%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
LI K D++KA + S + + G+ P +V++ A + +G+ ++ A ++ M+ +G
Sbjct: 53 LIELSRKLCDYSKAISIFSRLKRSGFTPDLVAYNAXINVFGKAKLFREARSLISEMRIAG 112
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
P+ +Y +L ++VE KF EA VF + L E K L D ++MI +Y + G +
Sbjct: 113 VMPNTASYSTLLTMYVENKKFLEALSVF-SELREMKCLL--DLTTCNIMIDVYGQLGMAK 169
Query: 222 KARKLFALMAERGVQQSTVTYNSLMSFETN---YKEVSKIYDQMQRAGLQPDVVSYALLI 278
+A KLF M + G++ + V+YN+L+ + + E ++ MQR ++ +VV+Y ++
Sbjct: 170 EADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMM 229
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCS 338
YGK E+A + +EM G+ P Y+ ++ + G +D+A +F+ +R
Sbjct: 230 MIYGKTLEHEKANNLIQEMQGRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVE 289
Query: 339 PDICSYTTMLSAY-------------------------------VNASDMEGAEKFFRRL 367
D + TM+ AY A +E A FRR
Sbjct: 290 IDQILFQTMIVAYERAGLVAHAKRLLHELKSPDNIPRDTAIHILAGAGRIEEATYVFRRA 349
Query: 368 KQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDF 427
G V ++ + +I ++K ++E++DKMR G P+ + +++AYGK +F
Sbjct: 350 IDAGEVKDITVFERMIHLFSKYKKYANVVEVFDKMRGLGYFPDSNVIALVLNAYGKLHEF 409
Query: 428 DSAVVWYKEMESCG 441
D A Y EM+ G
Sbjct: 410 DKANSVYMEMQEVG 423
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 84/318 (26%), Positives = 144/318 (45%), Gaps = 38/318 (11%)
Query: 200 LKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFE---TNYKEVS 256
L PD+ + +I + K G ++ A M + V V Y++L+ +Y +
Sbjct: 8 LSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDYSKAI 67
Query: 257 KIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAF 316
I+ +++R+G PD+V+Y IN +GKA+ EA ++ EM AGV P +Y+ LL +
Sbjct: 68 SIFSRLKRSGFTPDLVAYNAXINVFGKAKLFREARSLISEMRIAGVMPNTASYSTLLTMY 127
Query: 317 AISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNV 376
+ +A +VF +R +C D+ + M+ Y + A+K F +++ G PNV
Sbjct: 128 VENKKFLEALSVFSELREMKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNV 187
Query: 377 ITYGTLIKGYAKV---------------NNLEK-------MMEIYDK------------- 401
++Y TL++ Y N+E+ MM IY K
Sbjct: 188 VSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLIQE 247
Query: 402 MRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADE 461
M+ GI+PN ++TI+ +GK D A + ++++ S G DQ ++ + A
Sbjct: 248 MQGRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQILFQTMIVAYERAGL 307
Query: 462 RNEANELLGNFNHPNNEP 479
A LL P+N P
Sbjct: 308 VAHAKRLLHELKSPDNIP 325
Score = 85.9 bits (211), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 47/187 (25%), Positives = 83/187 (44%)
Query: 295 EEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNA 354
+EM D + P Y+ L+ F G+ D A + + M +DR D+ Y+ ++
Sbjct: 1 DEMRDRALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKL 60
Query: 355 SDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIF 414
D A F RLK+ GF P+++ Y I + K + + +MR+ G+ PN +
Sbjct: 61 CDYSKAISIFSRLKRSGFTPDLVAYNAXINVFGKAKLFREARSLISEMRIAGVMPNTASY 120
Query: 415 TTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNH 474
+T++ Y +NK F A+ + E+ D NI++ + EA++L
Sbjct: 121 STLLTMYVENKKFLEALSVFSELREMKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRK 180
Query: 475 PNNEPGI 481
EP +
Sbjct: 181 MGIEPNV 187
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 56/244 (22%), Positives = 117/244 (47%), Gaps = 6/244 (2%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + + L+ YG F +A + M +K +VV++ ++M YG+ ++ A +
Sbjct: 186 NVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLI 245
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
+ MQ G P+++TY I+ ++ + K A +F L S ++ DQ +F MI Y
Sbjct: 246 QEMQGRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKL---RSSGVEIDQILFQTMIVAY 302
Query: 215 KKAGGYEKARKLFA-LMAERGVQQSTVTYNSLMSFETNYKEVSKIYDQMQRAGLQPDVVS 273
++AG A++L L + + + T + +++ +E + ++ + AG D+
Sbjct: 303 ERAGLVAHAKRLLHELKSPDNIPRDTAIH--ILAGAGRIEEATYVFRRAIDAGEVKDITV 360
Query: 274 YALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMR 333
+ +I+ + K ++ + VF++M G P ++L+A+ D+A +V+ M+
Sbjct: 361 FERMIHLFSKYKKYANVVEVFDKMRGLGYFPDSNVIALVLNAYGKLHEFDKANSVYMEMQ 420
Query: 334 RDRC 337
C
Sbjct: 421 EVGC 424
>gi|357466003|ref|XP_003603286.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355492334|gb|AES73537.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1246
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 104/400 (26%), Positives = 182/400 (45%), Gaps = 9/400 (2%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
L+ A G++GD K +L M G P++ ++T + A GR R +A IF+ M G
Sbjct: 241 LMVALGRRGDTRKIMNLLEEMKSIGLRPNIYTYTICIRALGRARRIDDAWGIFKEMDDEG 300
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
P +TY +++ A K +A+E+++ + SP D+ + ++ + K G E
Sbjct: 301 CGPDVITYTVLIDALCAAGKLDKAKELYVKMRASSHSP---DRVTYITLMDKFGKVGDLE 357
Query: 222 KARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSKIYDQ---MQRAGLQPDVVSYALLI 278
++ + M G VTY L+ +V + +D M G+ P++ +Y +I
Sbjct: 358 TVKRFWNEMEVDGYAPDVVTYTILIEALCKSGDVDRAFDMLDVMTTKGIFPNLHTYNTMI 417
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCS 338
KARR +EAL + E M GV+PT +Y + +D + SG +A F+ M++
Sbjct: 418 CGLLKARRLDEALELLENMESLGVKPTAFSYVLFIDYYGKSGDPAKAIDTFETMKKRGIM 477
Query: 339 PDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEI 398
P I + L + AE F L + G P+ +TY L+K Y+K ++K ++
Sbjct: 478 PSIAACNASLYTLAETGRISEAEDIFNDLHKCGLSPDSVTYNMLMKCYSKAGQIDKATQL 537
Query: 399 YDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKT 458
+M G +P+ I ++++ K D+A + +++ P NILL+
Sbjct: 538 LSEMISKGCEPDVMIINSLINTLYKAGRVDAAWKMFGRLKNLKLAPTVVTYNILLTGLGK 597
Query: 459 ADERNEANELLGNFNH---PNNEPGINGLSISVDEEDDDD 495
+ +A EL G+ P N N L + + D D
Sbjct: 598 EGKILKALELFGSMTESGCPPNTITFNSLLDCLSKNDAVD 637
Score = 139 bits (349), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 85/313 (27%), Positives = 161/313 (51%), Gaps = 6/313 (1%)
Query: 114 KAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIIL 173
KA ++ M G P+ ++ L++A+G+ R ++ M+S G P+A+T+ II+
Sbjct: 814 KALELFEDMKSAGTHPNNFTYNLLLDAHGKSKRINKLYDLYSEMRSRGCEPNAITHNIII 873
Query: 174 KLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAER 233
V++N +A +++ L+ + SP + +I KAG E+A K+F M +
Sbjct: 874 SALVKSNNLNKALDLYYELMSGDFSP---TPCTYGPLIDGLLKAGRSEQAMKIFEEMLDY 930
Query: 234 GVQQSTVTYNSLMSFETNYKEV---SKIYDQMQRAGLQPDVVSYALLINAYGKARREEEA 290
G ++V YN L++ E+ +++ +M + G++PD+ SY +L+ R +EA
Sbjct: 931 GCGPNSVIYNILINGFGKSGEIDFACELFKKMVKEGIRPDLKSYTILVECLCITGRIDEA 990
Query: 291 LAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSA 350
+ FEE+ G+ P +YN +++ S +D+A ++F M+ SPD+ +Y ++
Sbjct: 991 VQYFEELKLTGLDPDTVSYNFIINGLGKSRRLDEALSLFSEMKNRGISPDLYTYNALILH 1050
Query: 351 YVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPN 410
A ++ A K + L+ G P+V TY LI+G++ N ++ ++ KM V G PN
Sbjct: 1051 LGIAGKVDVAVKMYEELQLVGLEPSVFTYNALIRGHSLSGNKDQAFSVFKKMMVVGCSPN 1110
Query: 411 QTIFTTIMDAYGK 423
F + + Y +
Sbjct: 1111 TETFAQLPNKYPR 1123
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 94/397 (23%), Positives = 174/397 (43%), Gaps = 41/397 (10%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + + I A G+ + A + M+ +G P V+++T L++A G+ A+ ++
Sbjct: 269 NIYTYTICIRALGRARRIDDAWGIFKEMDDEGCGPDVITYTVLIDALCAAGKLDKAKELY 328
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
+M++S P +TY ++ F K + E V + E PD + ++I
Sbjct: 329 VKMRASSHSPDRVTYITLMDKF---GKVGDLETVKRFWNEMEVDGYAPDVVTYTILIEAL 385
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYK---EVSKIYDQMQRAGLQPDV 271
K+G ++A + +M +G+ + TYN+++ + E ++ + M+ G++P
Sbjct: 386 CKSGDVDRAFDMLDVMTTKGIFPNLHTYNTMICGLLKARRLDEALELLENMESLGVKPTA 445
Query: 272 VSYALLINAYGKARREEEALAVFEEMLDAGVRPT-------------------------- 305
SY L I+ YGK+ +A+ FE M G+ P+
Sbjct: 446 FSYVLFIDYYGKSGDPAKAIDTFETMKKRGIMPSIAACNASLYTLAETGRISEAEDIFND 505
Query: 306 -HKA--------YNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASD 356
HK YN+L+ ++ +G +D+A + M C PD+ ++++ A
Sbjct: 506 LHKCGLSPDSVTYNMLMKCYSKAGQIDKATQLLSEMISKGCEPDVMIINSLINTLYKAGR 565
Query: 357 MEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTT 416
++ A K F RLK P V+TY L+ G K + K +E++ M +G PN F +
Sbjct: 566 VDAAWKMFGRLKNLKLAPTVVTYNILLTGLGKEGKILKALELFGSMTESGCPPNTITFNS 625
Query: 417 IMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILL 453
++D KN D A+ + M PD N ++
Sbjct: 626 LLDCLSKNDAVDLALKMFCRMTMMNCNPDVLTYNTII 662
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 90/347 (25%), Positives = 169/347 (48%), Gaps = 6/347 (1%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
+ + ++ L+ +GK GD ++ + M GYAP VV++T L+EA + G A +
Sbjct: 339 DRVTYITLMDKFGKVGDLETVKRFWNEMEVDGYAPDVVTYTILIEALCKSGDVDRAFDML 398
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
M + G P+ TY ++ ++A + EA E+ L + E +KP + + I Y
Sbjct: 399 DVMTTKGIFPNLHTYNTMICGLLKARRLDEALEL---LENMESLGVKPTAFSYVLFIDYY 455
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYN-SLMSF-ETN-YKEVSKIYDQMQRAGLQPDV 271
K+G KA F M +RG+ S N SL + ET E I++ + + GL PD
Sbjct: 456 GKSGDPAKAIDTFETMKKRGIMPSIAACNASLYTLAETGRISEAEDIFNDLHKCGLSPDS 515
Query: 272 VSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKC 331
V+Y +L+ Y KA + ++A + EM+ G P N L++ +G VD A +F
Sbjct: 516 VTYNMLMKCYSKAGQIDKATQLLSEMISKGCEPDVMIINSLINTLYKAGRVDAAWKMFGR 575
Query: 332 MRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNN 391
++ + +P + +Y +L+ + A + F + + G PN IT+ +L+ +K +
Sbjct: 576 LKNLKLAPTVVTYNILLTGLGKEGKILKALELFGSMTESGCPPNTITFNSLLDCLSKNDA 635
Query: 392 LEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEME 438
++ ++++ +M + P+ + TI+ + D A ++ +M+
Sbjct: 636 VDLALKMFCRMTMMNCNPDVLTYNTIIYGLIREGRIDYAFWFFHQMK 682
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 70/242 (28%), Positives = 133/242 (54%), Gaps = 8/242 (3%)
Query: 206 MFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLM---SFETNYKEVSKIYDQM 262
+ H+++ G +A K++ M G++ S TY++LM + +++ + ++M
Sbjct: 207 LIHLLL-----PGFCNEALKVYKRMISEGMKPSMKTYSALMVALGRRGDTRKIMNLLEEM 261
Query: 263 QRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMV 322
+ GL+P++ +Y + I A G+ARR ++A +F+EM D G P Y +L+DA +G +
Sbjct: 262 KSIGLRPNIYTYTICIRALGRARRIDDAWGIFKEMDDEGCGPDVITYTVLIDALCAAGKL 321
Query: 323 DQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTL 382
D+A+ ++ MR SPD +Y T++ + D+E ++F+ ++ DG+ P+V+TY L
Sbjct: 322 DKAKELYVKMRASSHSPDRVTYITLMDKFGKVGDLETVKRFWNEMEVDGYAPDVVTYTIL 381
Query: 383 IKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGF 442
I+ K ++++ ++ D M GI PN + T++ K + D A+ + MES G
Sbjct: 382 IEALCKSGDVDRAFDMLDVMTTKGIFPNLHTYNTMICGLLKARRLDEALELLENMESLGV 441
Query: 443 PP 444
P
Sbjct: 442 KP 443
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 82/321 (25%), Positives = 160/321 (49%), Gaps = 7/321 (2%)
Query: 149 NAEAIFRRM-QSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMF 207
+A+ +F + ++ G P+ +Y ++ + +N ++A E+F D + + P+ +
Sbjct: 778 DAQNVFDKFTKNLGIHPTLESYNCLMDGLLGSNFTEKALELFE---DMKSAGTHPNNFTY 834
Query: 208 HMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSF---ETNYKEVSKIYDQMQR 264
++++ + K+ K L++ M RG + + +T+N ++S N + +Y ++
Sbjct: 835 NLLLDAHGKSKRINKLYDLYSEMRSRGCEPNAITHNIIISALVKSNNLNKALDLYYELMS 894
Query: 265 AGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQ 324
P +Y LI+ KA R E+A+ +FEEMLD G P YNIL++ F SG +D
Sbjct: 895 GDFSPTPCTYGPLIDGLLKAGRSEQAMKIFEEMLDYGCGPNSVIYNILINGFGKSGEIDF 954
Query: 325 ARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIK 384
A +FK M ++ PD+ SYT ++ ++ A ++F LK G P+ ++Y +I
Sbjct: 955 ACELFKKMVKEGIRPDLKSYTILVECLCITGRIDEAVQYFEELKLTGLDPDTVSYNFIIN 1014
Query: 385 GYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPP 444
G K L++ + ++ +M+ GI P+ + ++ G D AV Y+E++ G P
Sbjct: 1015 GLGKSRRLDEALSLFSEMKNRGISPDLYTYNALILHLGIAGKVDVAVKMYEELQLVGLEP 1074
Query: 445 DQKAKNILLSLAKTADERNEA 465
N L+ + +++A
Sbjct: 1075 SVFTYNALIRGHSLSGNKDQA 1095
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 97/387 (25%), Positives = 179/387 (46%), Gaps = 15/387 (3%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
+I K ++A ++L M G P+ S+ ++ YG+ G A F M+ G
Sbjct: 416 MICGLLKARRLDEALELLENMESLGVKPTAFSYVLFIDYYGKSGDPAKAIDTFETMKKRG 475
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
PS L E + EAE++F D K L PD ++M++ Y KAG +
Sbjct: 476 IMPSIAACNASLYTLAETGRISEAEDIFN---DLHKCGLSPDSVTYNMLMKCYSKAGQID 532
Query: 222 KARKLFALMAERGVQQSTVTYNSLMSFETNYKE-----VSKIYDQMQRAGLQPDVVSYAL 276
KA +L + M +G + + NSL++ T YK K++ +++ L P VV+Y +
Sbjct: 533 KATQLLSEMISKGCEPDVMIINSLIN--TLYKAGRVDAAWKMFGRLKNLKLAPTVVTYNI 590
Query: 277 LINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDR 336
L+ GK + +AL +F M ++G P +N LLD + + VD A +F M
Sbjct: 591 LLTGLGKEGKILKALELFGSMTESGCPPNTITFNSLLDCLSKNDAVDLALKMFCRMTMMN 650
Query: 337 CSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMM 396
C+PD+ +Y T++ + ++ A FF ++K+ P+ +T TLI G + +E +
Sbjct: 651 CNPDVLTYNTIIYGLIREGRIDYAFWFFHQMKK-FLSPDYVTLCTLIPGVVRHGRVEDAI 709
Query: 397 EIY-DKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSL 455
++ + + ++ N + +M+ + + A+ + E+ C + +++L L
Sbjct: 710 KVVMEFVHQACLQTNSQFWGELMECILTEAEIEEAIS-FAEILVCN--SVCQDDHVMLPL 766
Query: 456 AKTADERNEANELLGNFNHPNNEPGIN 482
K +R +A + F+ GI+
Sbjct: 767 IKVLCKRKKALDAQNVFDKFTKNLGIH 793
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 73/261 (27%), Positives = 128/261 (49%), Gaps = 4/261 (1%)
Query: 223 ARKLFAL--MAERGVQQSTVTYNSLMSFETN--YKEVSKIYDQMQRAGLQPDVVSYALLI 278
R FAL M E G + +YN L+ E K+Y +M G++P + +Y+ L+
Sbjct: 183 GRAPFALRKMTEVGFILNAYSYNGLIHLLLPGFCNEALKVYKRMISEGMKPSMKTYSALM 242
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCS 338
A G+ + + + EEM G+RP Y I + A + +D A +FK M + C
Sbjct: 243 VALGRRGDTRKIMNLLEEMKSIGLRPNIYTYTICIRALGRARRIDDAWGIFKEMDDEGCG 302
Query: 339 PDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEI 398
PD+ +YT ++ A A ++ A++ + +++ P+ +TY TL+ + KV +LE +
Sbjct: 303 PDVITYTVLIDALCAAGKLDKAKELYVKMRASSHSPDRVTYITLMDKFGKVGDLETVKRF 362
Query: 399 YDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKT 458
+++M V+G P+ +T +++A K+ D D A M + G P+ N ++
Sbjct: 363 WNEMEVDGYAPDVVTYTILIEALCKSGDVDRAFDMLDVMTTKGIFPNLHTYNTMICGLLK 422
Query: 459 ADERNEANELLGNFNHPNNEP 479
A +EA ELL N +P
Sbjct: 423 ARRLDEALELLENMESLGVKP 443
Score = 113 bits (283), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 88/366 (24%), Positives = 164/366 (44%), Gaps = 9/366 (2%)
Query: 118 VLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFV 177
V M KK ++ ++ + +A G A R+M G +A +Y ++ L +
Sbjct: 153 VFDLMQKKVIYRNLTTYMTIFKALSIKGGIGRAPFALRKMTEVGFILNAYSYNGLIHLLL 212
Query: 178 EANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQ 237
EA +V+ ++ E +KP K + ++ + G K L M G++
Sbjct: 213 PGF-CNEALKVYKRMISEG---MKPSMKTYSALMVALGRRGDTRKIMNLLEEMKSIGLRP 268
Query: 238 STVTYNSLMSFETNYKEVS---KIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVF 294
+ TY + + + I+ +M G PDV++Y +LI+A A + ++A ++
Sbjct: 269 NIYTYTICIRALGRARRIDDAWGIFKEMDDEGCGPDVITYTVLIDALCAAGKLDKAKELY 328
Query: 295 EEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNA 354
+M + P Y L+D F G ++ + + M D +PD+ +YT ++ A +
Sbjct: 329 VKMRASSHSPDRVTYITLMDKFGKVGDLETVKRFWNEMEVDGYAPDVVTYTILIEALCKS 388
Query: 355 SDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIF 414
D++ A + G PN+ TY T+I G K L++ +E+ + M G+KP +
Sbjct: 389 GDVDRAFDMLDVMTTKGIFPNLHTYNTMICGLLKARRLDEALELLENMESLGVKPTAFSY 448
Query: 415 TTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNI-LLSLAKTADERNEANELLGNFN 473
+D YGK+ D A+ ++ M+ G P A N L +LA+T +EA ++ + +
Sbjct: 449 VLFIDYYGKSGDPAKAIDTFETMKKRGIMPSIAACNASLYTLAETG-RISEAEDIFNDLH 507
Query: 474 HPNNEP 479
P
Sbjct: 508 KCGLSP 513
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 79/360 (21%), Positives = 164/360 (45%), Gaps = 6/360 (1%)
Query: 124 KKGYAPSVVSHTALMEAYGRGGRYKNA-EAIFRRMQSSGPRPSALTYQIILKLFVEANKF 182
KK +P V+ L+ R GR ++A + + + + + ++ + +++ + +
Sbjct: 682 KKFLSPDYVTLCTLIPGVVRHGRVEDAIKVVMEFVHQACLQTNSQFWGELMECILTEAEI 741
Query: 183 KEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTY 242
+EA L+ S + D M ++ + K+ + G+ + +Y
Sbjct: 742 EEAISFAEILVCN--SVCQDDHVMLPLIKVLCKRKKALDAQNVFDKFTKNLGIHPTLESY 799
Query: 243 NSLMS--FETNYKEVS-KIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLD 299
N LM +N+ E + ++++ M+ AG P+ +Y LL++A+GK++R + ++ EM
Sbjct: 800 NCLMDGLLGSNFTEKALELFEDMKSAGTHPNNFTYNLLLDAHGKSKRINKLYDLYSEMRS 859
Query: 300 AGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEG 359
G P +NI++ A S +++A ++ + SP C+Y ++ + A E
Sbjct: 860 RGCEPNAITHNIIISALVKSNNLNKALDLYYELMSGDFSPTPCTYGPLIDGLLKAGRSEQ 919
Query: 360 AEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMD 419
A K F + G PN + Y LI G+ K ++ E++ KM GI+P+ +T +++
Sbjct: 920 AMKIFEEMLDYGCGPNSVIYNILINGFGKSGEIDFACELFKKMVKEGIRPDLKSYTILVE 979
Query: 420 AYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEP 479
D AV +++E++ G PD + N +++ + +EA L + P
Sbjct: 980 CLCITGRIDEAVQYFEELKLTGLDPDTVSYNFIINGLGKSRRLDEALSLFSEMKNRGISP 1039
Score = 108 bits (269), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 94/405 (23%), Positives = 167/405 (41%), Gaps = 44/405 (10%)
Query: 101 MLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSS 160
+L+T GK+G KA ++ M + G P+ ++ +L++ + A +F RM
Sbjct: 590 ILLTGLGKEGKILKALELFGSMTESGCPPNTITFNSLLDCLSKNDAVDLALKMFCRMTMM 649
Query: 161 GPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGY 220
P LTY I+ + + A F + K L PD +I + G
Sbjct: 650 NCNPDVLTYNTIIYGLIREGRIDYAFWFF----HQMKKFLSPDYVTLCTLIPGVVRHGRV 705
Query: 221 EKARKLFA-LMAERGVQQSTVTYNSLMSF---ETNYKEVSKIYDQMQRAGLQPDVVSYAL 276
E A K+ + + +Q ++ + LM E +E + + + D
Sbjct: 706 EDAIKVVMEFVHQACLQTNSQFWGELMECILTEAEIEEAISFAEILVCNSVCQDDHVMLP 765
Query: 277 LINAYGKARREEEALAVFEEML-DAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMR-- 333
LI K ++ +A VF++ + G+ PT ++YN L+D S ++A +F+ M+
Sbjct: 766 LIKVLCKRKKALDAQNVFDKFTKNLGIHPTLESYNCLMDGLLGSNFTEKALELFEDMKSA 825
Query: 334 --------------------------------RDR-CSPDICSYTTMLSAYVNASDMEGA 360
R R C P+ ++ ++SA V ++++ A
Sbjct: 826 GTHPNNFTYNLLLDAHGKSKRINKLYDLYSEMRSRGCEPNAITHNIIISALVKSNNLNKA 885
Query: 361 EKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDA 420
+ L F P TYG LI G K E+ M+I+++M G PN I+ +++
Sbjct: 886 LDLYYELMSGDFSPTPCTYGPLIDGLLKAGRSEQAMKIFEEMLDYGCGPNSVIYNILING 945
Query: 421 YGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEA 465
+GK+ + D A +K+M G PD K+ IL+ +EA
Sbjct: 946 FGKSGEIDFACELFKKMVKEGIRPDLKSYTILVECLCITGRIDEA 990
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 74/298 (24%), Positives = 136/298 (45%), Gaps = 41/298 (13%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + +L+ A+GK NK + S M +G P+ ++H ++ A + A ++
Sbjct: 830 NNFTYNLLLDAHGKSKRINKLYDLYSEMRSRGCEPNAITHNIIISALVKSNNLNKALDLY 889
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
+ S P+ TY ++ ++A + ++A ++F +LD P + +++++I +
Sbjct: 890 YELMSGDFSPTPCTYGPLIDGLLKAGRSEQAMKIFEEMLDYGCGP---NSVIYNILINGF 946
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSL---MSFETNYKEVSKIYDQMQRAGLQPDV 271
K+G + A +LF M + G++ +Y L + E + +++++ GL PD
Sbjct: 947 GKSGEIDFACELFKKMVKEGIRPDLKSYTILVECLCITGRIDEAVQYFEELKLTGLDPDT 1006
Query: 272 VSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVD-------- 323
VSY +IN GK+RR +EAL++F EM + G+ P YN L+ I+G VD
Sbjct: 1007 VSYNFIINGLGKSRRLDEALSLFSEMKNRGISPDLYTYNALILHLGIAGKVDVAVKMYEE 1066
Query: 324 ---------------------------QARTVFKCMRRDRCSPDICSYTTMLSAYVNA 354
QA +VFK M CSP+ ++ + + Y A
Sbjct: 1067 LQLVGLEPSVFTYNALIRGHSLSGNKDQAFSVFKKMMVVGCSPNTETFAQLPNKYPRA 1124
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 67/285 (23%), Positives = 127/285 (44%), Gaps = 24/285 (8%)
Query: 48 LRSERTRGQPLPKDLVLGTLVRLKQLKKWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYG 107
+RS + ++++ LV+ L K + +++ DF YG
Sbjct: 857 MRSRGCEPNAITHNIIISALVKSNNLNK-----------ALDLYYELMSGDFSPTPCTYG 905
Query: 108 -------KQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSS 160
K G +A K+ M G P+ V + L+ +G+ G A +F++M
Sbjct: 906 PLIDGLLKAGRSEQAMKIFEEMLDYGCGPNSVIYNILINGFGKSGEIDFACELFKKMVKE 965
Query: 161 GPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGY 220
G RP +Y I+++ + EA + F L + + L PD ++ +I K+
Sbjct: 966 GIRPDLKSYTILVECLCITGRIDEAVQYFEEL---KLTGLDPDTVSYNFIINGLGKSRRL 1022
Query: 221 EKARKLFALMAERGVQQSTVTYNSL---MSFETNYKEVSKIYDQMQRAGLQPDVVSYALL 277
++A LF+ M RG+ TYN+L + K+Y+++Q GL+P V +Y L
Sbjct: 1023 DEALSLFSEMKNRGISPDLYTYNALILHLGIAGKVDVAVKMYEELQLVGLEPSVFTYNAL 1082
Query: 278 INAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMV 322
I + + +++A +VF++M+ G P + + L + + +G+V
Sbjct: 1083 IRGHSLSGNKDQAFSVFKKMMVVGCSPNTETFAQLPNKYPRAGLV 1127
Score = 45.8 bits (107), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 41/209 (19%), Positives = 81/209 (38%), Gaps = 34/209 (16%)
Query: 305 THKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFF 364
T A N +L+ ++ VF M++ ++ +Y T+ A + A
Sbjct: 130 TTDACNYMLEILREQRRIEDMVFVFDLMQKKVIYRNLTTYMTIFKALSIKGGIGRAPFAL 189
Query: 365 RRLKQDGFV----------------------------------PNVITYGTLIKGYAKVN 390
R++ + GF+ P++ TY L+ +
Sbjct: 190 RKMTEVGFILNAYSYNGLIHLLLPGFCNEALKVYKRMISEGMKPSMKTYSALMVALGRRG 249
Query: 391 NLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKN 450
+ K+M + ++M+ G++PN +T + A G+ + D A +KEM+ G PD
Sbjct: 250 DTRKIMNLLEEMKSIGLRPNIYTYTICIRALGRARRIDDAWGIFKEMDDEGCGPDVITYT 309
Query: 451 ILLSLAKTADERNEANELLGNFNHPNNEP 479
+L+ A + ++A EL ++ P
Sbjct: 310 VLIDALCAAGKLDKAKELYVKMRASSHSP 338
>gi|255661166|gb|ACU25752.1| pentatricopeptide repeat-containing protein [Glandularia dissecta]
Length = 426
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 99/374 (26%), Positives = 182/374 (48%), Gaps = 37/374 (9%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
LI K D++KA + S + + G+ P +V++ A++ +G+ ++ A ++ M+++G
Sbjct: 50 LIELSRKLCDYSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMRTAG 109
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
P+ +Y +L ++VE KF EA VF + E K L D ++MI +Y + G +
Sbjct: 110 VTPNTASYSTLLTMYVENKKFLEALSVFAEM-REIKCLL--DLTTCNIMIDVYGQLGMAK 166
Query: 222 KARKLFALMAERGVQQSTVTYNSLMSFETN---YKEVSKIYDQMQRAGLQPDVVSYALLI 278
+A KLF M + G++ + V+YN+L+ + + E ++ MQR ++ +VV+Y ++
Sbjct: 167 EADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMM 226
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCS 338
YGK E+A + +EM + G+ P Y+ ++ + G +D+A +F+ +R
Sbjct: 227 MIYGKTLEHEKANNLIQEMQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVD 286
Query: 339 PDICSYTTMLSAY-------------------------------VNASDMEGAEKFFRRL 367
D Y TM+ AY A +E A FR+
Sbjct: 287 IDQVLYQTMIVAYERVGLVAHAKRLLHELKRPDNIPRDIAIHILAGAGRIEEATWVFRQA 346
Query: 368 KQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDF 427
G V ++ + +I ++K ++E++DKMR G P+ + +++AYGK +F
Sbjct: 347 IDAGEVKDITVFERMIHLFSKYKKYGNVVEVFDKMRGLGYFPDSXVIALVLNAYGKLHEF 406
Query: 428 DSAVVWYKEMESCG 441
D A Y EM+ G
Sbjct: 407 DKANDVYMEMQEVG 420
Score = 129 bits (323), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 82/319 (25%), Positives = 153/319 (47%), Gaps = 6/319 (1%)
Query: 164 PSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKA 223
P TY ++ F + F +A ++ +++++ P D ++ +I + +K Y KA
Sbjct: 7 PDRYTYSTLITHFGKEGLF-DAALSWLQKMEQDRVP--GDLVLYSNLIELSRKLCDYSKA 63
Query: 224 RKLFALMAERGVQQSTVTYNSLMSF---ETNYKEVSKIYDQMQRAGLQPDVVSYALLINA 280
+F+ + G V YN++++ ++E + +M+ AG+ P+ SY+ L+
Sbjct: 64 ISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVTPNTASYSTLLTM 123
Query: 281 YGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPD 340
Y + ++ EAL+VF EM + NI++D + GM +A +F MR+ P+
Sbjct: 124 YVENKKFLEALSVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPN 183
Query: 341 ICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYD 400
+ SY T+L Y +A A FR +++ NV+TY +++ Y K EK +
Sbjct: 184 VVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLIQ 243
Query: 401 KMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTAD 460
+M+ GI+PN ++TI+ +GK D A + ++++ S G DQ ++ +
Sbjct: 244 EMQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVDIDQVLYQTMIVAYERVG 303
Query: 461 ERNEANELLGNFNHPNNEP 479
A LL P+N P
Sbjct: 304 LVAHAKRLLHELKRPDNIP 322
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 79/346 (22%), Positives = 167/346 (48%), Gaps = 10/346 (2%)
Query: 124 KKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFK 183
++ +P +++ L+ +G+ G + A + ++M+ + Y +++L + +
Sbjct: 2 ERALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDYS 61
Query: 184 EAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYN 243
+A +F L ++S PD ++ MI ++ KA + +AR L + M GV +T +Y+
Sbjct: 62 KAISIFSRL---KRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVTPNTASYS 118
Query: 244 SLMSFETNYK---EVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDA 300
+L++ K E ++ +M+ D+ + ++I+ YG+ +EA +F M
Sbjct: 119 TLLTMYVENKKFLEALSVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKM 178
Query: 301 GVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGA 360
G+ P +YN LL + + + +A +F+ M+R ++ +Y +M+ Y + E A
Sbjct: 179 GIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKA 238
Query: 361 EKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDA 420
+ ++ G PN ITY T+I + KV L++ ++ K+R +G+ +Q ++ T++ A
Sbjct: 239 NNLIQEMQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVDIDQVLYQTMIVA 298
Query: 421 YGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEAN 466
Y + A E++ PD ++I + + A EA
Sbjct: 299 YERVGLVAHAKRLLHELKR----PDNIPRDIAIHILAGAGRIEEAT 340
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 45/181 (24%), Positives = 79/181 (43%)
Query: 301 GVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGA 360
+ P Y+ L+ F G+ D A + + M +DR D+ Y+ ++ D A
Sbjct: 4 ALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDYSKA 63
Query: 361 EKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDA 420
F RLK+ GF P+++ Y +I + K + + +MR G+ PN ++T++
Sbjct: 64 ISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVTPNTASYSTLLTM 123
Query: 421 YGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPG 480
Y +NK F A+ + EM D NI++ + EA++L EP
Sbjct: 124 YVENKKFLEALSVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPN 183
Query: 481 I 481
+
Sbjct: 184 V 184
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 54/244 (22%), Positives = 113/244 (46%), Gaps = 6/244 (2%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + + L+ YG F +A + M +K +VV++ ++M YG+ ++ A +
Sbjct: 183 NVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLI 242
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
+ MQ+ G P+++TY I+ ++ + K A +F L S + DQ ++ MI Y
Sbjct: 243 QEMQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKL---RSSGVDIDQVLYQTMIVAY 299
Query: 215 KKAGGYEKARKLFA-LMAERGVQQSTVTYNSLMSFETNYKEVSKIYDQMQRAGLQPDVVS 273
++ G A++L L + + + +++ +E + ++ Q AG D+
Sbjct: 300 ERVGLVAHAKRLLHELKRPDNIPRDIAIH--ILAGAGRIEEATWVFRQAIDAGEVKDITV 357
Query: 274 YALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMR 333
+ +I+ + K ++ + VF++M G P ++L+A+ D+A V+ M+
Sbjct: 358 FERMIHLFSKYKKYGNVVEVFDKMRGLGYFPDSXVIALVLNAYGKLHEFDKANDVYMEMQ 417
Query: 334 RDRC 337
C
Sbjct: 418 EVGC 421
Score = 58.5 bits (140), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 28/123 (22%), Positives = 64/123 (52%)
Query: 333 RRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNL 392
R SPD +Y+T+++ + + A + ++++QD +++ Y LI+ K+ +
Sbjct: 1 RERALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDY 60
Query: 393 EKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNIL 452
K + I+ +++ +G P+ + +++ +GK K F A EM + G P+ + + L
Sbjct: 61 SKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVTPNTASYSTL 120
Query: 453 LSL 455
L++
Sbjct: 121 LTM 123
>gi|222639781|gb|EEE67913.1| hypothetical protein OsJ_25766 [Oryza sativa Japonica Group]
Length = 625
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 101/362 (27%), Positives = 171/362 (47%), Gaps = 8/362 (2%)
Query: 114 KAEKVLSFM-NKKGYAP-SVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQI 171
+A +L M + KG P VV++T ++ R G+ A ++F M GP P +TY
Sbjct: 189 QALDLLHIMADHKGRCPLDVVAYTTVINGLLREGQLDKAYSLFDAMLDRGPSPDVVTYSS 248
Query: 172 ILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMA 231
I+ + +A +VF ++ K+ + PD M+ +++ Y +G ++A +F M
Sbjct: 249 IISALSKTQAMDKATQVFTRMV---KNGVMPDCIMYTSLVHGYCSSGKPKEAIGIFKKMC 305
Query: 232 ERGVQQSTVTYNSLMSF---ETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREE 288
GV+ VTY +LM + E KI+D + + G +PD +Y L++ Y
Sbjct: 306 RHGVEPDVVTYTALMDYLCKNGKSTEARKIFDSLVKRGHKPDSTTYGTLLHGYATEGALV 365
Query: 289 EALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTML 348
E + + M+ G++ H +N+++ A+A VD+A VF MR+ +PDI +Y T+L
Sbjct: 366 EMHDLLDLMMKKGMQLGHHIFNMIMGAYAKHNKVDEALLVFSNMRQQGLNPDIVNYGTVL 425
Query: 349 SAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIK 408
A ++ A F LK +G PN++ + TLI G + +K+ E+ +M GI
Sbjct: 426 DILCTAGRVDDALSQFNSLKSEGLAPNIVVFTTLIHGLCTCDKWDKVEELAFEMIDRGIC 485
Query: 409 PNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANEL 468
+ F IM K A + M G P+ N L+ + +EA +L
Sbjct: 486 LDTIFFNAIMGNLCKKGRVIEAKNLFDLMVRIGIEPNTNTYNTLIDGYCLDGKMDEAMKL 545
Query: 469 LG 470
LG
Sbjct: 546 LG 547
Score = 147 bits (371), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 94/371 (25%), Positives = 170/371 (45%), Gaps = 8/371 (2%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
+I+A K +KA +V + M K G P + +T+L+ Y G+ K A IF++M G
Sbjct: 249 IISALSKTQAMDKATQVFTRMVKNGVMPDCIMYTSLVHGYCSSGKPKEAIGIFKKMCRHG 308
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
P +TY ++ + K EA ++F +L+ K KPD + +++ Y G
Sbjct: 309 VEPDVVTYTALMDYLCKNGKSTEARKIFDSLV---KRGHKPDSTTYGTLLHGYATEGALV 365
Query: 222 KARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSK---IYDQMQRAGLQPDVVSYALLI 278
+ L LM ++G+Q +N +M + +V + ++ M++ GL PD+V+Y ++
Sbjct: 366 EMHDLLDLMMKKGMQLGHHIFNMIMGAYAKHNKVDEALLVFSNMRQQGLNPDIVNYGTVL 425
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTV-FKCMRRDRC 337
+ A R ++AL+ F + G+ P + L+ D+ + F+ + R C
Sbjct: 426 DILCTAGRVDDALSQFNSLKSEGLAPNIVVFTTLIHGLCTCDKWDKVEELAFEMIDRGIC 485
Query: 338 SPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMME 397
D + ++ + A+ F + + G PN TY TLI GY +++ M+
Sbjct: 486 L-DTIFFNAIMGNLCKKGRVIEAKNLFDLMVRIGIEPNTNTYNTLIDGYCLDGKMDEAMK 544
Query: 398 IYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAK 457
+ M NG+KP+ + TI++ Y +N + + +EM+ G P +LL
Sbjct: 545 LLGVMVFNGVKPSDVTYNTIINGYSQNGRIEDGLTLLREMDGKGVNPGIVTYEMLLQGLF 604
Query: 458 TADERNEANEL 468
A A EL
Sbjct: 605 QAGRTVAAKEL 615
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 80/329 (24%), Positives = 153/329 (46%), Gaps = 6/329 (1%)
Query: 144 GGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEE-KSPLKP 202
GGR + + RRM G +P +Y I+LK + ++A ++ + D + + PL
Sbjct: 149 GGRAMRMDIVLRRMPELGCKPDLFSYTILLKGLCDDKTSQQALDLLHIMADHKGRCPL-- 206
Query: 203 DQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSK---IY 259
D + +I + G +KA LF M +RG VTY+S++S + + + K ++
Sbjct: 207 DVVAYTTVINGLLREGQLDKAYSLFDAMLDRGPSPDVVTYSSIISALSKTQAMDKATQVF 266
Query: 260 DQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAIS 319
+M + G+ PD + Y L++ Y + + +EA+ +F++M GV P Y L+D +
Sbjct: 267 TRMVKNGVMPDCIMYTSLVHGYCSSGKPKEAIGIFKKMCRHGVEPDVVTYTALMDYLCKN 326
Query: 320 GMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITY 379
G +AR +F + + PD +Y T+L Y + + + G +
Sbjct: 327 GKSTEARKIFDSLVKRGHKPDSTTYGTLLHGYATEGALVEMHDLLDLMMKKGMQLGHHIF 386
Query: 380 GTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMES 439
++ YAK N +++ + ++ MR G+ P+ + T++D D A+ + ++S
Sbjct: 387 NMIMGAYAKHNKVDEALLVFSNMRQQGLNPDIVNYGTVLDILCTAGRVDDALSQFNSLKS 446
Query: 440 CGFPPDQKAKNILLSLAKTADERNEANEL 468
G P+ L+ T D+ ++ EL
Sbjct: 447 EGLAPNIVVFTTLIHGLCTCDKWDKVEEL 475
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 48/205 (23%), Positives = 93/205 (45%), Gaps = 5/205 (2%)
Query: 277 LINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCM--RR 334
L A G+A R + V M + G +P +Y ILL QA + M +
Sbjct: 145 LCTAGGRAMRMD---IVLRRMPELGCKPDLFSYTILLKGLCDDKTSQQALDLLHIMADHK 201
Query: 335 DRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEK 394
RC D+ +YTT+++ + ++ A F + G P+V+TY ++I +K ++K
Sbjct: 202 GRCPLDVVAYTTVINGLLREGQLDKAYSLFDAMLDRGPSPDVVTYSSIISALSKTQAMDK 261
Query: 395 MMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLS 454
+++ +M NG+ P+ ++T+++ Y + A+ +K+M G PD L+
Sbjct: 262 ATQVFTRMVKNGVMPDCIMYTSLVHGYCSSGKPKEAIGIFKKMCRHGVEPDVVTYTALMD 321
Query: 455 LAKTADERNEANELLGNFNHPNNEP 479
+ EA ++ + ++P
Sbjct: 322 YLCKNGKSTEARKIFDSLVKRGHKP 346
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/108 (25%), Positives = 55/108 (50%)
Query: 86 LRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGG 145
L ++ + N + LI Y G ++A K+L M G PS V++ ++ Y + G
Sbjct: 513 LMVRIGIEPNTNTYNTLIDGYCLDGKMDEAMKLLGVMVFNGVKPSDVTYNTIINGYSQNG 572
Query: 146 RYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLL 193
R ++ + R M G P +TY+++L+ +A + A+E+++ ++
Sbjct: 573 RIEDGLTLLREMDGKGVNPGIVTYEMLLQGLFQAGRTVAAKELYLRMI 620
Score = 43.1 bits (100), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 48/210 (22%), Positives = 81/210 (38%), Gaps = 47/210 (22%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + F LI ++K E++ M +G + A+M + GR A+ +F
Sbjct: 452 NIVVFTTLIHGLCTCDKWDKVEELAFEMIDRGICLDTIFFNAIMGNLCKKGRVIEAKNLF 511
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
M G P+ TY TL+D Y
Sbjct: 512 DLMVRIGIEPNTNTYN--------------------TLIDG------------------Y 533
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSKIYD------QMQRAGLQ 268
G ++A KL +M GV+ S VTYN++++ Y + +I D +M G+
Sbjct: 534 CLDGKMDEAMKLLGVMVFNGVKPSDVTYNTIIN---GYSQNGRIEDGLTLLREMDGKGVN 590
Query: 269 PDVVSYALLINAYGKARREEEALAVFEEML 298
P +V+Y +L+ +A R A ++ M+
Sbjct: 591 PGIVTYEMLLQGLFQAGRTVAAKELYLRMI 620
>gi|359490016|ref|XP_002275236.2| PREDICTED: pentatricopeptide repeat-containing protein At3g18110,
chloroplastic-like [Vitis vinifera]
Length = 1442
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 99/374 (26%), Positives = 180/374 (48%), Gaps = 12/374 (3%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
LI AY G + +A + + M + G +P+V S LM+A GR + + +Q G
Sbjct: 788 LIHAYAASGCYERARAIFNTMMRDGPSPTVDSVNGLMQALIVDGRLDELYVVIQELQDMG 847
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
+ S + ++L F A E ++++ + + + P ++ +MI + K +
Sbjct: 848 FKISKSSITLMLDAFAHAGNIFEVKKIYQGM---KAAGYFPTMHLYRIMIGLLAKG---K 901
Query: 222 KARKLFALMAERGVQQ---STVTYNSLMSFET---NYKEVSKIYDQMQRAGLQPDVVSYA 275
+ R + A+++E V + +NS++ T ++K+ ++Y +Q AGL+PD +Y
Sbjct: 902 RVRDVEAMVSEMEVARFKPDLSIWNSVLKLYTGIGDFKKTGQVYQLIQEAGLKPDEDTYN 961
Query: 276 LLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRD 335
LI Y + RR EE L++ EM G+ P Y L+ AF MV+QA +F+ +
Sbjct: 962 TLILMYCRDRRPEEGLSLMHEMRRVGLEPKLDTYKSLISAFGKLQMVEQAEELFEGLLSK 1021
Query: 336 RCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKM 395
C D Y M+ + N+ + AEK +K+ G P + T L+ Y+ E+
Sbjct: 1022 ECKLDRSFYHIMMKMFRNSGNHSKAEKLLGVMKEAGVEPTIATMHLLMVSYSGSGQPEEA 1081
Query: 396 MEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSL 455
++ D ++V G+ + +++++DAY KN D + A+ EM+ G PD + +
Sbjct: 1082 EKVLDNLKVEGLPLSTLPYSSVIDAYLKNGDHNVAIQKLMEMKKDGLEPDHRIWTCFVRA 1141
Query: 456 AKTADERNEANELL 469
A + +EA LL
Sbjct: 1142 ASLSQHTSEAIVLL 1155
Score = 138 bits (348), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 100/427 (23%), Positives = 184/427 (43%), Gaps = 45/427 (10%)
Query: 56 QPLPKDLVLGTLVRLKQLKKWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGK------- 108
Q P D +V+ W EV EWL ++ W+ N +++ GK
Sbjct: 150 QMTPTDFCF--VVKWVGQSSWQRALEVYEWLNLRHWYSPNARMLATILSVLGKANQEALA 207
Query: 109 ---------------------------QGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAY 141
G F K +++L M +G P +VS L+ A
Sbjct: 208 VEIFARAEAASGNTVQVYNAMMGVYARTGRFTKVQELLDLMRSRGCEPDLVSFNTLINAR 267
Query: 142 GRGGRYKNAEAI--FRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSP 199
+ G AI ++ SG +P +TY ++ + +EA +V+ ++
Sbjct: 268 LKSGTMVTNLAIELLNEVRRSGIQPDIITYNTLISACSRESNLEEAVKVYNDMVAHR--- 324
Query: 200 LKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLM---SFETNYKEVS 256
+PD ++ MI +Y + G +A +LF + +G VTYNSL+ + E N +V
Sbjct: 325 CQPDLWTYNAMISVYGRCGMSREAGRLFKDLESKGFLPDAVTYNSLLYAFAREGNVDKVK 384
Query: 257 KIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAF 316
+I + M + G D ++Y +I+ YGK + + A ++ +M +G P Y +L+D+
Sbjct: 385 EICEDMVKMGFGKDEMTYNTIIHMYGKRGQHDLAFQLYSDMKLSGRSPDAVTYTVLIDSL 444
Query: 317 AISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNV 376
+ M+ +A V M R P + +++ ++ Y A AE+ F + + G P+
Sbjct: 445 GKANMIKEAAEVMSEMLNARVKPTLRTFSALICGYAKAGKRVEAEETFDCMLRSGIKPDH 504
Query: 377 ITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGK-NKDFDSAVVWYK 435
+ Y ++ + N K M++Y +M ++ KP+ ++ ++ GK N++ D V
Sbjct: 505 LAYSVMLDILLRFNESGKAMKLYQEMVLHSFKPDHALYEVMLRVLGKENREEDVHKVVKD 564
Query: 436 EMESCGF 442
E CG
Sbjct: 565 MEELCGM 571
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 103/407 (25%), Positives = 189/407 (46%), Gaps = 17/407 (4%)
Query: 69 RLKQLKKWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMN-KKGY 127
R+ LK V++VL+ ++Q DF ++ G Q + +A +V ++N + Y
Sbjct: 130 RILGLKSEEFVADVLDDRKVQ----MTPTDFCFVVKWVG-QSSWQRALEVYEWLNLRHWY 184
Query: 128 APSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEE 187
+P+ ++ G+ + A IF R +++ + Y ++ ++ +F + +E
Sbjct: 185 SPNARMLATILSVLGKANQEALAVEIFARAEAASGN-TVQVYNAMMGVYARTGRFTKVQE 243
Query: 188 VFMTLLDEEKS-PLKPDQKMFHMMIYMYKKAGGYEK--ARKLFALMAERGVQQSTVTYNS 244
LLD +S +PD F+ +I K+G A +L + G+Q +TYN+
Sbjct: 244 ----LLDLMRSRGCEPDLVSFNTLINARLKSGTMVTNLAIELLNEVRRSGIQPDIITYNT 299
Query: 245 LMSF---ETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAG 301
L+S E+N +E K+Y+ M QPD+ +Y +I+ YG+ EA +F+++ G
Sbjct: 300 LISACSRESNLEEAVKVYNDMVAHRCQPDLWTYNAMISVYGRCGMSREAGRLFKDLESKG 359
Query: 302 VRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAE 361
P YN LL AFA G VD+ + + + M + D +Y T++ Y + A
Sbjct: 360 FLPDAVTYNSLLYAFAREGNVDKVKEICEDMVKMGFGKDEMTYNTIIHMYGKRGQHDLAF 419
Query: 362 KFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAY 421
+ + +K G P+ +TY LI K N +++ E+ +M +KP F+ ++ Y
Sbjct: 420 QLYSDMKLSGRSPDAVTYTVLIDSLGKANMIKEAAEVMSEMLNARVKPTLRTFSALICGY 479
Query: 422 GKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANEL 468
K A + M G PD A +++L + +E +A +L
Sbjct: 480 AKAGKRVEAEETFDCMLRSGIKPDHLAYSVMLDILLRFNESGKAMKL 526
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 80/289 (27%), Positives = 141/289 (48%), Gaps = 6/289 (2%)
Query: 202 PDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETN---YKEVSKI 258
P+ +M ++ + KA A ++FA AE + YN++M + +V ++
Sbjct: 186 PNARMLATILSVLGKANQEALAVEIFA-RAEAASGNTVQVYNAMMGVYARTGRFTKVQEL 244
Query: 259 YDQMQRAGLQPDVVSYALLINAYGKARREEEALAV--FEEMLDAGVRPTHKAYNILLDAF 316
D M+ G +PD+VS+ LINA K+ LA+ E+ +G++P YN L+ A
Sbjct: 245 LDLMRSRGCEPDLVSFNTLINARLKSGTMVTNLAIELLNEVRRSGIQPDIITYNTLISAC 304
Query: 317 AISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNV 376
+ +++A V+ M RC PD+ +Y M+S Y A + F+ L+ GF+P+
Sbjct: 305 SRESNLEEAVKVYNDMVAHRCQPDLWTYNAMISVYGRCGMSREAGRLFKDLESKGFLPDA 364
Query: 377 ITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKE 436
+TY +L+ +A+ N++K+ EI + M G ++ + TI+ YGK D A Y +
Sbjct: 365 VTYNSLLYAFAREGNVDKVKEICEDMVKMGFGKDEMTYNTIIHMYGKRGQHDLAFQLYSD 424
Query: 437 MESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGINGLS 485
M+ G PD +L+ A+ EA E++ + +P + S
Sbjct: 425 MKLSGRSPDAVTYTVLIDSLGKANMIKEAAEVMSEMLNARVKPTLRTFS 473
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 84/348 (24%), Positives = 173/348 (49%), Gaps = 14/348 (4%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
L+ A G ++ V+ + G+ S S T +++A+ G + I++ M+++G
Sbjct: 823 LMQALIVDGRLDELYVVIQELQDMGFKISKSSITLMLDAFAHAGNIFEVKKIYQGMKAAG 882
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
P+ Y+I++ L + + ++ E + + E + KPD +++ ++ +Y G ++
Sbjct: 883 YFPTMHLYRIMIGLLAKGKRVRDVEAMVSEM---EVARFKPDLSIWNSVLKLYTGIGDFK 939
Query: 222 KARKLFALMAERGVQQSTVTYNSLMSF---ETNYKEVSKIYDQMQRAGLQPDVVSYALLI 278
K +++ L+ E G++ TYN+L+ + +E + +M+R GL+P + +Y LI
Sbjct: 940 KTGQVYQLIQEAGLKPDEDTYNTLILMYCRDRRPEEGLSLMHEMRRVGLEPKLDTYKSLI 999
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCS 338
+A+GK + E+A +FE +L + Y+I++ F SG +A + M+
Sbjct: 1000 SAFGKLQMVEQAEELFEGLLSKECKLDRSFYHIMMKMFRNSGNHSKAEKLLGVMKEAGVE 1059
Query: 339 PDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNN----LEK 394
P I + ++ +Y + E AEK LK +G + + Y ++I Y K + ++K
Sbjct: 1060 PTIATMHLLMVSYSGSGQPEEAEKVLDNLKVEGLPLSTLPYSSVIDAYLKNGDHNVAIQK 1119
Query: 395 MMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGF 442
+ME M+ +G++P+ I+T + A ++ A+V K + GF
Sbjct: 1120 LME----MKKDGLEPDHRIWTCFVRAASLSQHTSEAIVLLKALRDTGF 1163
Score = 118 bits (296), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 79/333 (23%), Positives = 159/333 (47%), Gaps = 13/333 (3%)
Query: 164 PSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKA 223
P+A IL + +AN+ A E+F ++ ++++ M+ +Y + G + K
Sbjct: 186 PNARMLATILSVLGKANQEALAVEIFA----RAEAASGNTVQVYNAMMGVYARTGRFTKV 241
Query: 224 RKLFALMAERGVQQSTVTYNSLM-------SFETNYKEVSKIYDQMQRAGLQPDVVSYAL 276
++L LM RG + V++N+L+ + TN ++ ++++R+G+QPD+++Y
Sbjct: 242 QELLDLMRSRGCEPDLVSFNTLINARLKSGTMVTNL--AIELLNEVRRSGIQPDIITYNT 299
Query: 277 LINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDR 336
LI+A + EEA+ V+ +M+ +P YN ++ + GM +A +FK +
Sbjct: 300 LISACSRESNLEEAVKVYNDMVAHRCQPDLWTYNAMISVYGRCGMSREAGRLFKDLESKG 359
Query: 337 CSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMM 396
PD +Y ++L A+ +++ ++ + + GF + +TY T+I Y K +
Sbjct: 360 FLPDAVTYNSLLYAFAREGNVDKVKEICEDMVKMGFGKDEMTYNTIIHMYGKRGQHDLAF 419
Query: 397 EIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLA 456
++Y M+++G P+ +T ++D+ GK A EM + P + + L+
Sbjct: 420 QLYSDMKLSGRSPDAVTYTVLIDSLGKANMIKEAAEVMSEMLNARVKPTLRTFSALICGY 479
Query: 457 KTADERNEANELLGNFNHPNNEPGINGLSISVD 489
A +R EA E +P S+ +D
Sbjct: 480 AKAGKRVEAEETFDCMLRSGIKPDHLAYSVMLD 512
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 74/287 (25%), Positives = 137/287 (47%), Gaps = 6/287 (2%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
LI+A ++ + +A KV + M P + ++ A++ YGR G + A +F+ ++S G
Sbjct: 300 LISACSRESNLEEAVKVYNDMVAHRCQPDLWTYNAMISVYGRCGMSREAGRLFKDLESKG 359
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
P A+TY +L F + +E+ D K D+ ++ +I+MY K G ++
Sbjct: 360 FLPDAVTYNSLLYAFAREGNVDKVKEICE---DMVKMGFGKDEMTYNTIIHMYGKRGQHD 416
Query: 222 KARKLFALMAERGVQQSTVTYNSL---MSFETNYKEVSKIYDQMQRAGLQPDVVSYALLI 278
A +L++ M G VTY L + KE +++ +M A ++P + +++ LI
Sbjct: 417 LAFQLYSDMKLSGRSPDAVTYTVLIDSLGKANMIKEAAEVMSEMLNARVKPTLRTFSALI 476
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCS 338
Y KA + EA F+ ML +G++P H AY+++LD +A +++ M
Sbjct: 477 CGYAKAGKRVEAEETFDCMLRSGIKPDHLAYSVMLDILLRFNESGKAMKLYQEMVLHSFK 536
Query: 339 PDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKG 385
PD Y ML + E K + +++ + + + L+KG
Sbjct: 537 PDHALYEVMLRVLGKENREEDVHKVVKDMEELCGMNSQVICSILVKG 583
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 81/379 (21%), Positives = 175/379 (46%), Gaps = 7/379 (1%)
Query: 112 FNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQI 171
F +A ++ S M G PS + +++ Y + G + A + + + G ++
Sbjct: 692 FAEASQIFSDMRFYGVEPSDHLYRSMVVTYCKMGFPETAHYLIDQAEEKGLLFDDVSIHT 751
Query: 172 -ILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALM 230
+++ + + +++AE + +L +K + D+K+++ +I+ Y +G YE+AR +F M
Sbjct: 752 GVIEAYGKLKLWQKAESLVGSL--RQKCTM-VDRKVWNALIHAYAASGCYERARAIFNTM 808
Query: 231 AERGVQQSTVTYNSLMS---FETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARRE 287
G + + N LM + E+ + ++Q G + S L+++A+ A
Sbjct: 809 MRDGPSPTVDSVNGLMQALIVDGRLDELYVVIQELQDMGFKISKSSITLMLDAFAHAGNI 868
Query: 288 EEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTM 347
E +++ M AG PT Y I++ A V + M R PD+ + ++
Sbjct: 869 FEVKKIYQGMKAAGYFPTMHLYRIMIGLLAKGKRVRDVEAMVSEMEVARFKPDLSIWNSV 928
Query: 348 LSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGI 407
L Y D + + ++ +++ G P+ TY TLI Y + E+ + + +MR G+
Sbjct: 929 LKLYTGIGDFKKTGQVYQLIQEAGLKPDEDTYNTLILMYCRDRRPEEGLSLMHEMRRVGL 988
Query: 408 KPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANE 467
+P + +++ A+GK + + A ++ + S D+ +I++ + + + ++A +
Sbjct: 989 EPKLDTYKSLISAFGKLQMVEQAEELFEGLLSKECKLDRSFYHIMMKMFRNSGNHSKAEK 1048
Query: 468 LLGNFNHPNNEPGINGLSI 486
LLG EP I + +
Sbjct: 1049 LLGVMKEAGVEPTIATMHL 1067
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 85/384 (22%), Positives = 166/384 (43%), Gaps = 9/384 (2%)
Query: 86 LRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGG 145
L I + + + L ++ +YG G +A ++L F+ + + + AL+ +
Sbjct: 595 LAISQGCELDRENLLSILGSYGSSGRHLEARELLDFLREHSSGSHQLINEALIIMLCKAH 654
Query: 146 RYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANK-FKEAEEVFMTLLDEEKSPLKPDQ 204
+ +A + + + G + T L L E N+ F EA ++F D ++P
Sbjct: 655 QLGDALREYGKARDFGLFCGSFTMYESLLLCCEENELFAEASQIFS---DMRFYGVEPSD 711
Query: 205 KMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETN----YKEVSKIYD 260
++ M+ Y K G E A L E+G+ V+ ++ + +++ +
Sbjct: 712 HLYRSMVVTYCKMGFPETAHYLIDQAEEKGLLFDDVSIHTGVIEAYGKLKLWQKAESLVG 771
Query: 261 QMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISG 320
+++ D + LI+AY + E A A+F M+ G PT + N L+ A + G
Sbjct: 772 SLRQKCTMVDRKVWNALIHAYAASGCYERARAIFNTMMRDGPSPTVDSVNGLMQALIVDG 831
Query: 321 MVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYG 380
+D+ V + ++ S T ML A+ +A ++ +K ++ +K G+ P + Y
Sbjct: 832 RLDELYVVIQELQDMGFKISKSSITLMLDAFAHAGNIFEVKKIYQGMKAAGYFPTMHLYR 891
Query: 381 TLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESC 440
+I AK + + + +M V KP+ +I+ +++ Y DF Y+ ++
Sbjct: 892 IMIGLLAKGKRVRDVEAMVSEMEVARFKPDLSIWNSVLKLYTGIGDFKKTGQVYQLIQEA 951
Query: 441 GFPPDQKAKNILLSLAKTADERNE 464
G PD+ N L+ L D R E
Sbjct: 952 GLKPDEDTYNTLI-LMYCRDRRPE 974
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 84/397 (21%), Positives = 164/397 (41%), Gaps = 21/397 (5%)
Query: 99 FLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQ 158
+ +LI + GK +A +V+S M P++ + +AL+ Y + G+ AE F M
Sbjct: 437 YTVLIDSLGKANMIKEAAEVMSEMLNARVKPTLRTFSALICGYAKAGKRVEAEETFDCML 496
Query: 159 SSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAG 218
SG +P L Y ++L + + N+ +A +++ ++ KPD ++ +M+ + K
Sbjct: 497 RSGIKPDHLAYSVMLDILLRFNESGKAMKLYQEMVLHS---FKPDHALYEVMLRVLGKEN 553
Query: 219 GYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSKIYDQMQRAGLQPDVVSYALLI 278
E K+ M E S V + L+ E + + + G + D + ++
Sbjct: 554 REEDVHKVVKDMEELCGMNSQVICSILVKGEC-FDHAANMLRLAISQGCELDRENLLSIL 612
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCS 338
+YG + R EA E+LD + ++ ++ +A I M+ +A + +R +
Sbjct: 613 GSYGSSGRHLEA----RELLDFLREHSSGSHQLINEALII--MLCKAHQLGDALREYGKA 666
Query: 339 PD---ICSYTTMLSAYVNASD----MEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNN 391
D C TM + + + A + F ++ G P+ Y +++ Y K+
Sbjct: 667 RDFGLFCGSFTMYESLLLCCEENELFAEASQIFSDMRFYGVEPSDHLYRSMVVTYCKMGF 726
Query: 392 LEKMMEIYDKMRVNGIK-PNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKN 450
E + D+ G+ + +I T +++AYGK K + A + D+K N
Sbjct: 727 PETAHYLIDQAEEKGLLFDDVSIHTGVIEAYGKLKLWQKAESLVGSLRQKCTMVDRKVWN 786
Query: 451 ILLSLAKTADERNEANELLGNFNHPNNEP---GINGL 484
L+ + A + P +NGL
Sbjct: 787 ALIHAYAASGCYERARAIFNTMMRDGPSPTVDSVNGL 823
>gi|410110135|gb|AFV61147.1| pentatricopeptide repeat-containing protein 123, partial [Lippia
rotundifolia]
Length = 440
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 99/374 (26%), Positives = 182/374 (48%), Gaps = 37/374 (9%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
LI K D++KA + S + + G+ P +V++ A++ +G+ ++ A ++ M+++G
Sbjct: 57 LIELSRKLCDYSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMKTAG 116
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
P+ +Y +L ++VE KF EA VF + + E K L D ++MI +Y + G +
Sbjct: 117 VMPNTTSYSTLLTMYVENKKFLEALSVF-SEMREIKCLL--DLTTCNIMIDVYGQLGMAK 173
Query: 222 KARKLFALMAERGVQQSTVTYNSLMSFETN---YKEVSKIYDQMQRAGLQPDVVSYALLI 278
+A KLF M + G++ + V+YN+L+ + + E ++ MQR ++ +VV+Y ++
Sbjct: 174 EADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMM 233
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCS 338
YGK E+A + +EM G+ P Y+ ++ + G +D+A +F+ +R
Sbjct: 234 MIYGKTLEHEKANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVE 293
Query: 339 PDICSYTTMLSAY-------------------------------VNASDMEGAEKFFRRL 367
D + TM+ AY A +E A FR+
Sbjct: 294 IDQILFQTMIVAYERAGLVAHAKRLLHELKRPDNIPRDTAIHILAGAGRIEEATYVFRQA 353
Query: 368 KQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDF 427
G V N+ + +I +K ++E++DKMR G P+ + +++AYGK ++F
Sbjct: 354 IDAGEVKNIAVFERMIHLLSKYKKYANVVEVFDKMRGLGYFPDSNVIAVVLNAYGKLQEF 413
Query: 428 DSAVVWYKEMESCG 441
D A Y EM+ G
Sbjct: 414 DKANDVYMEMQEVG 427
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 85/332 (25%), Positives = 158/332 (47%), Gaps = 6/332 (1%)
Query: 151 EAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMM 210
+F M+ P TY ++ F + F +A ++ +++++ P D ++ +
Sbjct: 1 HGLFDEMRQRALSPDRYTYSTLITHFGKEGLF-DAALSWLQKMEQDQVP--GDLVLYSNL 57
Query: 211 IYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSF---ETNYKEVSKIYDQMQRAGL 267
I + +K Y KA +F+ + G V YN++++ ++E + +M+ AG+
Sbjct: 58 IELSRKLCDYSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMKTAGV 117
Query: 268 QPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQART 327
P+ SY+ L+ Y + ++ EAL+VF EM + NI++D + GM +A
Sbjct: 118 MPNTTSYSTLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADK 177
Query: 328 VFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYA 387
+F MR+ P++ SY T+L Y +A A FR +++ NV+TY +++ Y
Sbjct: 178 LFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYG 237
Query: 388 KVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQK 447
K EK + +M+ GI+PN ++TI+ +GK D A + ++++ S G DQ
Sbjct: 238 KTLEHEKANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQI 297
Query: 448 AKNILLSLAKTADERNEANELLGNFNHPNNEP 479
++ + A A LL P+N P
Sbjct: 298 LFQTMIVAYERAGLVAHAKRLLHELKRPDNIP 329
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 73/303 (24%), Positives = 154/303 (50%), Gaps = 6/303 (1%)
Query: 122 MNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANK 181
M ++ +P +++ L+ +G+ G + A + ++M+ + Y +++L +
Sbjct: 7 MRQRALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDQVPGDLVLYSNLIELSRKLCD 66
Query: 182 FKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVT 241
+ +A +F L ++S PD ++ MI ++ KA + +AR L + M GV +T +
Sbjct: 67 YSKAISIFSRL---KRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMKTAGVMPNTTS 123
Query: 242 YNSLMSFETNYK---EVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEML 298
Y++L++ K E ++ +M+ D+ + ++I+ YG+ +EA +F M
Sbjct: 124 YSTLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMR 183
Query: 299 DAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDME 358
G+ P +YN LL + + + +A +F+ M+R ++ +Y +M+ Y + E
Sbjct: 184 KMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHE 243
Query: 359 GAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIM 418
A + ++ G PN ITY T+I + KV L++ ++ K+R +G++ +Q +F T++
Sbjct: 244 KANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQILFQTMI 303
Query: 419 DAY 421
AY
Sbjct: 304 VAY 306
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 85/190 (44%)
Query: 292 AVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAY 351
+F+EM + P Y+ L+ F G+ D A + + M +D+ D+ Y+ ++
Sbjct: 2 GLFDEMRQRALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDQVPGDLVLYSNLIELS 61
Query: 352 VNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQ 411
D A F RLK+ GF P+++ Y +I + K + + +M+ G+ PN
Sbjct: 62 RKLCDYSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMKTAGVMPNT 121
Query: 412 TIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGN 471
T ++T++ Y +NK F A+ + EM D NI++ + EA++L
Sbjct: 122 TSYSTLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWG 181
Query: 472 FNHPNNEPGI 481
EP +
Sbjct: 182 MRKMGIEPNV 191
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/244 (23%), Positives = 115/244 (47%), Gaps = 6/244 (2%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + + L+ YG F +A + M +K +VV++ ++M YG+ ++ A +
Sbjct: 190 NVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLI 249
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
+ MQS G P+++TY I+ ++ + K A +F L S ++ DQ +F MI Y
Sbjct: 250 QEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKL---RSSGVEIDQILFQTMIVAY 306
Query: 215 KKAGGYEKARKLFA-LMAERGVQQSTVTYNSLMSFETNYKEVSKIYDQMQRAGLQPDVVS 273
++AG A++L L + + T + +++ +E + ++ Q AG ++
Sbjct: 307 ERAGLVAHAKRLLHELKRPDNIPRDTAIH--ILAGAGRIEEATYVFRQAIDAGEVKNIAV 364
Query: 274 YALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMR 333
+ +I+ K ++ + VF++M G P ++L+A+ D+A V+ M+
Sbjct: 365 FERMIHLLSKYKKYANVVEVFDKMRGLGYFPDSNVIAVVLNAYGKLQEFDKANDVYMEMQ 424
Query: 334 RDRC 337
C
Sbjct: 425 EVGC 428
Score = 44.3 bits (103), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 26/123 (21%), Positives = 51/123 (41%)
Query: 363 FFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYG 422
F ++Q P+ TY TLI + K + + KM + + + +++ +++
Sbjct: 3 LFDEMRQRALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDQVPGDLVLYSNLIELSR 62
Query: 423 KNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGIN 482
K D+ A+ + ++ GF PD A N ++++ A EA L+ P
Sbjct: 63 KLCDYSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMKTAGVMPNTT 122
Query: 483 GLS 485
S
Sbjct: 123 SYS 125
>gi|326528911|dbj|BAJ97477.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 913
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 97/395 (24%), Positives = 184/395 (46%), Gaps = 43/395 (10%)
Query: 98 DFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRM 157
+F ++I Y K+GD + A M +G P+ T+L+ AY + A + M
Sbjct: 279 EFGLMIVYYAKRGDKHHARATFENMRARGIEPNAFVFTSLVHAYAVARDMRGALSCTEEM 338
Query: 158 QSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKP-DQKMFHMMIYMYKK 216
++ G + +TY I++ F + N + A+ +F E K+ L + ++ +I+ + +
Sbjct: 339 KAEGIELTIVTYSILISGFGKINDTQSADNLF----KEAKTNLGDLNGIIYSNIIHAHCQ 394
Query: 217 AGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSK---IYDQMQRAGLQPDVVS 273
+G ++A +L M E G+ Y+S+M T ++ K ++++++ P ++S
Sbjct: 395 SGNMDRAEELVHEMEEDGIDAPIDAYHSMMHGYTIIQDEKKCLIVFERLKECCFTPSIIS 454
Query: 274 YALLINAYGKARREEEALA-----------------------------------VFEEML 298
Y LIN Y K + +A+A +FEEML
Sbjct: 455 YGCLINLYVKIGKVAKAIAISKEMESSGIKHNNKTYSMLISGFIHLHDFTNAFRIFEEML 514
Query: 299 DAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDME 358
+G++P YN+L++AF G +D+A + + M+++R P ++ ++ + A DM+
Sbjct: 515 KSGLQPDRAIYNLLIEAFCKMGNMDRAIRILEKMQKERMQPSNRAFRPIIEGFAVAGDMK 574
Query: 359 GAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIM 418
A +++ G P V+TY LI G + N +E+ + + +KM + GI PN+ +T IM
Sbjct: 575 RALDILDLMRRSGCAPTVMTYNALIHGLIRKNQVERAVSVLNKMSIAGITPNEHTYTIIM 634
Query: 419 DAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILL 453
Y D A ++ +++ G D LL
Sbjct: 635 RGYAATGDIAKAFEYFTKIKEGGLKLDVYIYETLL 669
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 93/391 (23%), Positives = 183/391 (46%), Gaps = 41/391 (10%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
++ Y D K V + + + PS++S+ L+ Y + G+ A AI + M+SSG
Sbjct: 423 MMHGYTIIQDEKKCLIVFERLKECCFTPSIISYGCLINLYVKIGKVAKAIAISKEMESSG 482
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
+ + TY +++ F+ + F A +F +L KS L+PD+ +++++I + K G +
Sbjct: 483 IKHNNKTYSMLISGFIHLHDFTNAFRIFEEML---KSGLQPDRAIYNLLIEAFCKMGNMD 539
Query: 222 KARKLFALMAERGVQQSTVTYNSLM---SFETNYKEVSKIYDQMQRAGLQPDVVSYALLI 278
+A ++ M + +Q S + ++ + + K I D M+R+G P V++Y LI
Sbjct: 540 RAIRILEKMQKERMQPSNRAFRPIIEGFAVAGDMKRALDILDLMRRSGCAPTVMTYNALI 599
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCS 338
+ + + E A++V +M AG+ P Y I++ +A +G + +A F ++
Sbjct: 600 HGLIRKNQVERAVSVLNKMSIAGITPNEHTYTIIMRGYAATGDIAKAFEYFTKIKEGGLK 659
Query: 339 PDICSYTTMLSAYVNASDMEG-----------------------------------AEKF 363
D+ Y T+L A + M+ A
Sbjct: 660 LDVYIYETLLRACCKSGRMQSALAVTREMSSQKIARNTFVYNILIDGWARRGDVWEAADL 719
Query: 364 FRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGK 423
+++K+DG PN+ TY + I K ++++ + D+M G+KPN +TT++ + +
Sbjct: 720 MKQMKEDGVPPNIHTYTSYINACCKAGDMQRAQTVIDEMSDVGLKPNLKTYTTLIKGWAR 779
Query: 424 NKDFDSAVVWYKEMESCGFPPDQKAKNILLS 454
D A+ ++EM+ G PD+ A + L++
Sbjct: 780 ASLPDRALKCFEEMKLAGLKPDEAAYHCLVT 810
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 96/423 (22%), Positives = 191/423 (45%), Gaps = 35/423 (8%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N F L+ AY D A M +G ++V+++ L+ +G+ ++A+ +F
Sbjct: 311 NAFVFTSLVHAYAVARDMRGALSCTEEMKAEGIELTIVTYSILISGFGKINDTQSADNLF 370
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVF---------------------MTLL 193
+ +++ + + Y I+ ++ AEE+ T++
Sbjct: 371 KEAKTNLGDLNGIIYSNIIHAHCQSGNMDRAEELVHEMEEDGIDAPIDAYHSMMHGYTII 430
Query: 194 DEEKSPL-----------KPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTY 242
+EK L P + +I +Y K G KA + M G++ + TY
Sbjct: 431 QDEKKCLIVFERLKECCFTPSIISYGCLINLYVKIGKVAKAIAISKEMESSGIKHNNKTY 490
Query: 243 NSLMS---FETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLD 299
+ L+S ++ +I+++M ++GLQPD Y LLI A+ K + A+ + E+M
Sbjct: 491 SMLISGFIHLHDFTNAFRIFEEMLKSGLQPDRAIYNLLIEAFCKMGNMDRAIRILEKMQK 550
Query: 300 AGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEG 359
++P+++A+ +++ FA++G + +A + MRR C+P + +Y ++ + + +E
Sbjct: 551 ERMQPSNRAFRPIIEGFAVAGDMKRALDILDLMRRSGCAPTVMTYNALIHGLIRKNQVER 610
Query: 360 AEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMD 419
A ++ G PN TY +++GYA ++ K E + K++ G+K + I+ T++
Sbjct: 611 AVSVLNKMSIAGITPNEHTYTIIMRGYAATGDIAKAFEYFTKIKEGGLKLDVYIYETLLR 670
Query: 420 AYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEP 479
A K+ SA+ +EM S + NIL+ + EA +L+ P
Sbjct: 671 ACCKSGRMQSALAVTREMSSQKIARNTFVYNILIDGWARRGDVWEAADLMKQMKEDGVPP 730
Query: 480 GIN 482
I+
Sbjct: 731 NIH 733
Score = 138 bits (348), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 93/361 (25%), Positives = 178/361 (49%), Gaps = 10/361 (2%)
Query: 63 VLGTLVRLKQLKKWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFM 122
++ V++ ++ K +S+ +E S N + MLI+ + DF A ++ M
Sbjct: 458 LINLYVKIGKVAKAIAISKEME----SSGIKHNNKTYSMLISGFIHLHDFTNAFRIFEEM 513
Query: 123 NKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKF 182
K G P + L+EA+ + G A I +MQ +PS ++ I++ F A
Sbjct: 514 LKSGLQPDRAIYNLLIEAFCKMGNMDRAIRILEKMQKERMQPSNRAFRPIIEGFAVAGDM 573
Query: 183 KEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTY 242
K A ++ + +S P ++ +I+ + E+A + M+ G+ + TY
Sbjct: 574 KRALDILDLM---RRSGCAPTVMTYNALIHGLIRKNQVERAVSVLNKMSIAGITPNEHTY 630
Query: 243 NSLMSFETNYKEVSKIYD---QMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLD 299
+M +++K ++ +++ GL+ DV Y L+ A K+ R + ALAV EM
Sbjct: 631 TIIMRGYAATGDIAKAFEYFTKIKEGGLKLDVYIYETLLRACCKSGRMQSALAVTREMSS 690
Query: 300 AGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEG 359
+ YNIL+D +A G V +A + K M+ D P+I +YT+ ++A A DM+
Sbjct: 691 QKIARNTFVYNILIDGWARRGDVWEAADLMKQMKEDGVPPNIHTYTSYINACCKAGDMQR 750
Query: 360 AEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMD 419
A+ + G PN+ TY TLIKG+A+ + ++ ++ +++M++ G+KP++ + ++
Sbjct: 751 AQTVIDEMSDVGLKPNLKTYTTLIKGWARASLPDRALKCFEEMKLAGLKPDEAAYHCLVT 810
Query: 420 A 420
+
Sbjct: 811 S 811
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 80/304 (26%), Positives = 142/304 (46%), Gaps = 11/304 (3%)
Query: 196 EKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLM---SFETNY 252
E+ P KP ++ F +MI Y K G AR F M RG++ + + SL+ + +
Sbjct: 270 ERIP-KPSRREFGLMIVYYAKRGDKHHARATFENMRARGIEPNAFVFTSLVHAYAVARDM 328
Query: 253 KEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNIL 312
+ ++M+ G++ +V+Y++LI+ +GK + A +F+E Y+ +
Sbjct: 329 RGALSCTEEMKAEGIELTIVTYSILISGFGKINDTQSADNLFKEAKTNLGDLNGIIYSNI 388
Query: 313 LDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGF 372
+ A SG +D+A + M D I +Y +M+ Y D + F RLK+ F
Sbjct: 389 IHAHCQSGNMDRAEELVHEMEEDGIDAPIDAYHSMMHGYTIIQDEKKCLIVFERLKECCF 448
Query: 373 VPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVV 432
P++I+YG LI Y K+ + K + I +M +GIK N ++ ++ + DF +A
Sbjct: 449 TPSIISYGCLINLYVKIGKVAKAIAISKEMESSGIKHNNKTYSMLISGFIHLHDFTNAFR 508
Query: 433 WYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFN----HPNN---EPGINGLS 485
++EM G PD+ N+L+ + A +L P+N P I G +
Sbjct: 509 IFEEMLKSGLQPDRAIYNLLIEAFCKMGNMDRAIRILEKMQKERMQPSNRAFRPIIEGFA 568
Query: 486 ISVD 489
++ D
Sbjct: 569 VAGD 572
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 69/266 (25%), Positives = 135/266 (50%), Gaps = 7/266 (2%)
Query: 99 FLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQ 158
F +I + GD +A +L M + G AP+V+++ AL+ R + + A ++ +M
Sbjct: 560 FRPIIEGFAVAGDMKRALDILDLMRRSGCAPTVMTYNALIHGLIRKNQVERAVSVLNKMS 619
Query: 159 SSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAG 218
+G P+ TY II++ + +A E F + ++ LK D ++ ++ K+G
Sbjct: 620 IAGITPNEHTYTIIMRGYAATGDIAKAFEYFTKI---KEGGLKLDVYIYETLLRACCKSG 676
Query: 219 GYEKARKLFALMAERGVQQSTVTYNSLM---SFETNYKEVSKIYDQMQRAGLQPDVVSYA 275
+ A + M+ + + ++T YN L+ + + E + + QM+ G+ P++ +Y
Sbjct: 677 RMQSALAVTREMSSQKIARNTFVYNILIDGWARRGDVWEAADLMKQMKEDGVPPNIHTYT 736
Query: 276 LLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRD 335
INA KA + A V +EM D G++P K Y L+ +A + + D+A F+ M+
Sbjct: 737 SYINACCKAGDMQRAQTVIDEMSDVGLKPNLKTYTTLIKGWARASLPDRALKCFEEMKLA 796
Query: 336 RCSPDICSYTTMLSAYVN-ASDMEGA 360
PD +Y ++++ ++ A+ MEG+
Sbjct: 797 GLKPDEAAYHCLVTSLLSRATVMEGS 822
Score = 47.0 bits (110), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 37/158 (23%), Positives = 68/158 (43%), Gaps = 6/158 (3%)
Query: 356 DMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFT 415
D + F R+ + P+ +G +I YAK + ++ MR GI+PN +FT
Sbjct: 261 DWQAVVSAFERIPK----PSRREFGLMIVYYAKRGDKHHARATFENMRARGIEPNAFVFT 316
Query: 416 TIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHP 475
+++ AY +D A+ +EM++ G +IL+S ++ A+ L
Sbjct: 317 SLVHAYAVARDMRGALSCTEEMKAEGIELTIVTYSILISGFGKINDTQSADNLFKEAK-- 374
Query: 476 NNEPGINGLSISVDEEDDDDDDDEDDDDNIYHDGDGDG 513
N +NG+ S + D + + H+ + DG
Sbjct: 375 TNLGDLNGIIYSNIIHAHCQSGNMDRAEELVHEMEEDG 412
>gi|297808179|ref|XP_002871973.1| kinase family protein [Arabidopsis lyrata subsp. lyrata]
gi|297317810|gb|EFH48232.1| kinase family protein [Arabidopsis lyrata subsp. lyrata]
Length = 831
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 110/449 (24%), Positives = 205/449 (45%), Gaps = 38/449 (8%)
Query: 18 VFKDAADEAGKKNWRRLMNQIEEVGSAVAVLRSERT--------RGQPLPKDLVLGTLVR 69
VFKD+ E G+ R I G+ +RS RT RG+P + TL+
Sbjct: 291 VFKDS--EEGRVQLRSFPCVICSGGTTCGDVRS-RTKLMNGLIERGRPQEAHSIFNTLI- 346
Query: 70 LKQLKKWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAP 129
++ K ++++ + L+TA +Q F+ ++S + K G P
Sbjct: 347 -EEGHKPSIIT------------------YTTLVTALTRQKHFHSLLSLISKVQKNGLRP 387
Query: 130 SVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVF 189
+ A++ A G A IF +M+ SG +P+A T+ ++K + + K +E+ +
Sbjct: 388 DTILFNAIINASSESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYGKIGKLEESSRLL 447
Query: 190 MTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFE 249
+L +E L+P+ + ++++ + E+A + M GV+ VT+N+L
Sbjct: 448 EMMLRDEM--LQPNDRTCNILVQAWCNQRKIEEAWNIVYKMQSFGVKPDAVTFNTLARAY 505
Query: 250 TNYKEVSK----IYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPT 305
+ I +M ++P+V + ++N Y + + EEAL F M + GV P
Sbjct: 506 SRIGSTCTAEDMIIPRMLHNKVKPNVRTCGTIVNGYCEEGKMEEALRFFYRMKELGVHPN 565
Query: 306 HKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFR 365
+N L+ F +D V M PD+ +++T+++A+ + DM+ E+ +R
Sbjct: 566 LFVFNSLIKGFLNINDMDGVGEVVDLMEEFGVKPDVVTFSTLMNAWSSVGDMKRCEEIYR 625
Query: 366 RLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNK 425
+ + G P++ + L KGYA+ EK +I ++MR G++PN I+T I+ +
Sbjct: 626 DMLEGGIDPDIHAFSILAKGYARAGEPEKAEQILNQMRKFGVRPNVVIYTQIISGWCSAG 685
Query: 426 DFDSAVVWYKEME-SCGFPPDQKAKNILL 453
+ A+ Y +M S G P+ L+
Sbjct: 686 EMKKAMQVYNKMRGSVGLSPNLTTYETLI 714
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 98/357 (27%), Positives = 176/357 (49%), Gaps = 10/357 (2%)
Query: 131 VVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFM 190
V S T LM GR + A +IF + G +PS +TY ++ F +
Sbjct: 319 VRSRTKLMNGLIERGRPQEAHSIFNTLIEEGHKPSIITYTTLVTALTRQKHFHS----LL 374
Query: 191 TLLDE-EKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFE 249
+L+ + +K+ L+PD +F+ +I ++G ++A K+F M E G + + T+N+L+
Sbjct: 375 SLISKVQKNGLRPDTILFNAIINASSESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGY 434
Query: 250 ---TNYKEVSKIYDQMQR-AGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPT 305
+E S++ + M R LQP+ + +L+ A+ R+ EEA + +M GV+P
Sbjct: 435 GKIGKLEESSRLLEMMLRDEMLQPNDRTCNILVQAWCNQRKIEEAWNIVYKMQSFGVKPD 494
Query: 306 HKAYNILLDAFAISGMVDQAR-TVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFF 364
+N L A++ G A + M ++ P++ + T+++ Y ME A +FF
Sbjct: 495 AVTFNTLARAYSRIGSTCTAEDMIIPRMLHNKVKPNVRTCGTIVNGYCEEGKMEEALRFF 554
Query: 365 RRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKN 424
R+K+ G PN+ + +LIKG+ +N+++ + E+ D M G+KP+ F+T+M+A+
Sbjct: 555 YRMKELGVHPNLFVFNSLIKGFLNINDMDGVGEVVDLMEEFGVKPDVVTFSTLMNAWSSV 614
Query: 425 KDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGI 481
D Y++M G PD A +IL A E +A ++L P +
Sbjct: 615 GDMKRCEEIYRDMLEGGIDPDIHAFSILAKGYARAGEPEKAEQILNQMRKFGVRPNV 671
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 88/331 (26%), Positives = 169/331 (51%), Gaps = 13/331 (3%)
Query: 99 FLMLITAYGKQGDFNKAEKVLSFMNK-KGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRM 157
F LI YGK G ++ ++L M + + P+ + L++A+ + + A I +M
Sbjct: 427 FNTLIKGYGKIGKLEESSRLLEMMLRDEMLQPNDRTCNILVQAWCNQRKIEEAWNIVYKM 486
Query: 158 QSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKA 217
QS G +P A+T+ + + + AE++ + + K +KP+ + ++ Y +
Sbjct: 487 QSFGVKPDAVTFNTLARAYSRIGSTCTAEDMIIPRMLHNK--VKPNVRTCGTIVNGYCEE 544
Query: 218 GGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKE---VSKIYDQMQRAGLQPDVVSY 274
G E+A + F M E GV + +NSL+ N + V ++ D M+ G++PDVV++
Sbjct: 545 GKMEEALRFFYRMKELGVHPNLFVFNSLIKGFLNINDMDGVGEVVDLMEEFGVKPDVVTF 604
Query: 275 ALLINAY---GKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKC 331
+ L+NA+ G +R EE ++ +ML+ G+ P A++IL +A +G ++A +
Sbjct: 605 STLMNAWSSVGDMKRCEE---IYRDMLEGGIDPDIHAFSILAKGYARAGEPEKAEQILNQ 661
Query: 332 MRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQD-GFVPNVITYGTLIKGYAKVN 390
MR+ P++ YT ++S + +A +M+ A + + +++ G PN+ TY TLI G+ +
Sbjct: 662 MRKFGVRPNVVIYTQIISGWCSAGEMKKAMQVYNKMRGSVGLSPNLTTYETLIWGFGEAK 721
Query: 391 NLEKMMEIYDKMRVNGIKPNQTIFTTIMDAY 421
K E+ +M + P + I D +
Sbjct: 722 QPWKAEELLKEMEEKNVVPTRKTMQLIADGW 752
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 73/294 (24%), Positives = 135/294 (45%), Gaps = 8/294 (2%)
Query: 101 MLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAE-AIFRRMQS 159
+L+ A+ Q +A ++ M G P V+ L AY R G AE I RM
Sbjct: 465 ILVQAWCNQRKIEEAWNIVYKMQSFGVKPDAVTFNTLARAYSRIGSTCTAEDMIIPRMLH 524
Query: 160 SGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGG 219
+ +P+ T I+ + E K +EA F + ++ + P+ +F+ +I +
Sbjct: 525 NKVKPNVRTCGTIVNGYCEEGKMEEALRFFYRM---KELGVHPNLFVFNSLIKGFLNIND 581
Query: 220 YEKARKLFALMAERGVQQSTVTYNSLM---SFETNYKEVSKIYDQMQRAGLQPDVVSYAL 276
+ ++ LM E GV+ VT+++LM S + K +IY M G+ PD+ ++++
Sbjct: 582 MDGVGEVVDLMEEFGVKPDVVTFSTLMNAWSSVGDMKRCEEIYRDMLEGGIDPDIHAFSI 641
Query: 277 LINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRD- 335
L Y +A E+A + +M GVRP Y ++ + +G + +A V+ MR
Sbjct: 642 LAKGYARAGEPEKAEQILNQMRKFGVRPNVVIYTQIISGWCSAGEMKKAMQVYNKMRGSV 701
Query: 336 RCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKV 389
SP++ +Y T++ + A AE+ + +++ VP T + G+ +
Sbjct: 702 GLSPNLTTYETLIWGFGEAKQPWKAEELLKEMEEKNVVPTRKTMQLIADGWKSI 755
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 51/224 (22%), Positives = 108/224 (48%), Gaps = 7/224 (3%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
++ Y ++G +A + M + G P++ +L++ + + M+ G
Sbjct: 537 IVNGYCEEGKMEEALRFFYRMKELGVHPNLFVFNSLIKGFLNINDMDGVGEVVDLMEEFG 596
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
+P +T+ ++ + K EE++ +L+ + PD F ++ Y +AG E
Sbjct: 597 VKPDVVTFSTLMNAWSSVGDMKRCEEIYRDMLE---GGIDPDIHAFSILAKGYARAGEPE 653
Query: 222 KARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSK---IYDQMQ-RAGLQPDVVSYALL 277
KA ++ M + GV+ + V Y ++S + E+ K +Y++M+ GL P++ +Y L
Sbjct: 654 KAEQILNQMRKFGVRPNVVIYTQIISGWCSAGEMKKAMQVYNKMRGSVGLSPNLTTYETL 713
Query: 278 INAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGM 321
I +G+A++ +A + +EM + V PT K ++ D + G+
Sbjct: 714 IWGFGEAKQPWKAEELLKEMEEKNVVPTRKTMQLIADGWKSIGV 757
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 30/130 (23%), Positives = 66/130 (50%)
Query: 340 DICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIY 399
D+ S T +++ + + A F L ++G P++ITY TL+ + + ++ +
Sbjct: 318 DVRSRTKLMNGLIERGRPQEAHSIFNTLIEEGHKPSIITYTTLVTALTRQKHFHSLLSLI 377
Query: 400 DKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTA 459
K++ NG++P+ +F I++A ++ + D A+ +++M+ G P N L+
Sbjct: 378 SKVQKNGLRPDTILFNAIINASSESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYGKI 437
Query: 460 DERNEANELL 469
+ E++ LL
Sbjct: 438 GKLEESSRLL 447
>gi|255661186|gb|ACU25762.1| pentatricopeptide repeat-containing protein [Xeroaloysia
ovatifolia]
Length = 426
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 99/374 (26%), Positives = 183/374 (48%), Gaps = 37/374 (9%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
LI K D++KA + S + + G+ P +V++ A++ +G+ ++ A ++ M+++G
Sbjct: 50 LIELSRKLCDYSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMRTAG 109
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
P+ +Y +L ++VE KF EA VF + + E K L D ++MI +Y + G +
Sbjct: 110 VMPNTASYTTLLTMYVENKKFLEALSVF-SEMREIKCLL--DLTTCNIMIDVYGQLGMAK 166
Query: 222 KARKLFALMAERGVQQSTVTYNSLMSFETN---YKEVSKIYDQMQRAGLQPDVVSYALLI 278
+A KLF M + G++ + V+YN+L+ + + E ++ MQR + +VV+Y ++
Sbjct: 167 EADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIVQNVVTYNSMM 226
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCS 338
YGK E+A + +EM + G+ P Y+ ++ + +G +D+A +F+ +R
Sbjct: 227 MIYGKTLEHEKANNLIQEMQNRGIEPNSITYSTIISIWGKAGKLDRAAMLFQKLRSSGVE 286
Query: 339 PDICSYTTMLSAY-------------------------------VNASDMEGAEKFFRRL 367
D Y TM+ AY A +E A FR+
Sbjct: 287 IDQVLYQTMIVAYEKAGLVAHAKRLLHELKSPDNIPRDTAIHILAGAGRIEEATYVFRQA 346
Query: 368 KQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDF 427
G V ++ + +I ++K ++E++DKMR G P+ + +++AYGK +F
Sbjct: 347 IDAGEVRDITVFERMIHLFSKYKKYANVVEVFDKMRGLGYFPDSNVIALVLNAYGKLHEF 406
Query: 428 DSAVVWYKEMESCG 441
D A Y EM+ G
Sbjct: 407 DKANGVYMEMQEVG 420
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 84/318 (26%), Positives = 141/318 (44%), Gaps = 38/318 (11%)
Query: 200 LKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFE---TNYKEVS 256
L PD+ + +I + K G ++ A M + V V Y++L+ +Y +
Sbjct: 5 LSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDYSKAI 64
Query: 257 KIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAF 316
I+ +++R+G PD+V+Y +IN +GKA+ EA ++ EM AGV P +Y LL +
Sbjct: 65 SIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVMPNTASYTTLLTMY 124
Query: 317 AISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNV 376
+ +A +VF MR +C D+ + M+ Y + A+K F +++ G PNV
Sbjct: 125 VENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNV 184
Query: 377 ITYGTLIKGYA----------------------KVNNLEKMMEIYDK------------- 401
++Y TL++ Y V MM IY K
Sbjct: 185 VSYNTLLRVYGDAELFGEAIHLFRLMQRKNIVQNVVTYNSMMMIYGKTLEHEKANNLIQE 244
Query: 402 MRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADE 461
M+ GI+PN ++TI+ +GK D A + ++++ S G DQ ++ + A
Sbjct: 245 MQNRGIEPNSITYSTIISIWGKAGKLDRAAMLFQKLRSSGVEIDQVLYQTMIVAYEKAGL 304
Query: 462 RNEANELLGNFNHPNNEP 479
A LL P+N P
Sbjct: 305 VAHAKRLLHELKSPDNIP 322
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/244 (23%), Positives = 118/244 (48%), Gaps = 6/244 (2%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + + L+ YG F +A + M +K +VV++ ++M YG+ ++ A +
Sbjct: 183 NVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIVQNVVTYNSMMMIYGKTLEHEKANNLI 242
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
+ MQ+ G P+++TY I+ ++ +A K A +F L S ++ DQ ++ MI Y
Sbjct: 243 QEMQNRGIEPNSITYSTIISIWGKAGKLDRAAMLFQKL---RSSGVEIDQVLYQTMIVAY 299
Query: 215 KKAGGYEKARKLFA-LMAERGVQQSTVTYNSLMSFETNYKEVSKIYDQMQRAGLQPDVVS 273
+KAG A++L L + + + T + +++ +E + ++ Q AG D+
Sbjct: 300 EKAGLVAHAKRLLHELKSPDNIPRDTAIH--ILAGAGRIEEATYVFRQAIDAGEVRDITV 357
Query: 274 YALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMR 333
+ +I+ + K ++ + VF++M G P ++L+A+ D+A V+ M+
Sbjct: 358 FERMIHLFSKYKKYANVVEVFDKMRGLGYFPDSNVIALVLNAYGKLHEFDKANGVYMEMQ 417
Query: 334 RDRC 337
C
Sbjct: 418 EVGC 421
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 79/181 (43%)
Query: 301 GVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGA 360
+ P Y+ L+ F G+ D A + + M +DR D+ Y+ ++ D A
Sbjct: 4 ALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDYSKA 63
Query: 361 EKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDA 420
F RLK+ GF P+++ Y +I + K + + +MR G+ PN +TT++
Sbjct: 64 ISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVMPNTASYTTLLTM 123
Query: 421 YGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPG 480
Y +NK F A+ + EM D NI++ + EA++L EP
Sbjct: 124 YVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPN 183
Query: 481 I 481
+
Sbjct: 184 V 184
>gi|308080398|ref|NP_001183938.1| PPR-814a [Zea mays]
gi|223929924|gb|ACN24620.1| PPR-814a [Zea mays]
Length = 814
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 91/355 (25%), Positives = 172/355 (48%), Gaps = 6/355 (1%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
++ A K +KAE L M KG P+ ++ L+ Y G++K A +F+ M+
Sbjct: 260 VVHALCKARAMDKAEAFLRQMVNKGVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQS 319
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
P +T+ +++ + K KEA +VF T+ + ++P D +++M+ Y G
Sbjct: 320 ILPDVVTFNMLMGSLCKYGKIKEARDVFDTMAMKGQNP---DVFSYNIMLNGYATKGCLV 376
Query: 222 KARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSK---IYDQMQRAGLQPDVVSYALLI 278
LF LM G+ T+N L+ N + K I+++M+ G++P+V++Y +I
Sbjct: 377 DMTDLFDLMLGDGIAPVICTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPNVLTYTTVI 436
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCS 338
A + + ++A+ F +M+D GV P AY+ L+ F G + +A+ + + +
Sbjct: 437 AALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMH 496
Query: 339 PDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEI 398
DI ++++++ + A+ F G P + Y L+ GY V +EK + +
Sbjct: 497 LDIVLFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPTAVVYSMLMDGYCLVGKMEKALRV 556
Query: 399 YDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILL 453
+D M GI+PN ++ T+++ Y K D + ++EM G P NI++
Sbjct: 557 FDAMVSAGIEPNDVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIII 611
Score = 142 bits (359), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 99/364 (27%), Positives = 171/364 (46%), Gaps = 8/364 (2%)
Query: 113 NKAEKVLSFMN---KKGYAPSVVSHTALMEAYGRGGRYKNA-EAIFRRMQSSGPRPSALT 168
++ E L+F + G ++ L++ + R A + + R G P +
Sbjct: 125 HRPELALAFFGQLLRTGLRVDIIIANHLLKGFCEAKRTDEALDILLHRTPELGCVPDVFS 184
Query: 169 YQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFA 228
Y I+LK + K +A+++ + ++ E + PD ++ +I + K G KA LF
Sbjct: 185 YSILLKSLCDQGKSGQADDL-LRMMAEGGAVCSPDVVAYNTVIDGFFKEGDVNKACDLFK 243
Query: 229 LMAERGVQQSTVTYNSLMSFETNYKEVSK---IYDQMQRAGLQPDVVSYALLINAYGKAR 285
M +RG+ VTY+S++ + + K QM G+ P+ +Y LI Y
Sbjct: 244 EMVQRGIPPDFVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPNNWTYNNLIYGYSSTG 303
Query: 286 REEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYT 345
+ +EA+ VF+EM + P +N+L+ + G + +AR VF M +PD+ SY
Sbjct: 304 QWKEAVRVFKEMRRQSILPDVVTFNMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYN 363
Query: 346 TMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVN 405
ML+ Y + F + DG P + T+ LIK YA L+K M I+++MR +
Sbjct: 364 IMLNGYATKGCLVDMTDLFDLMLGDGIAPVICTFNVLIKAYANCGMLDKAMIIFNEMRDH 423
Query: 406 GIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEA 465
G+KPN +TT++ A + D A+ + +M G PD+ A + L+ T +A
Sbjct: 424 GVKPNVLTYTTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKA 483
Query: 466 NELL 469
EL+
Sbjct: 484 KELI 487
Score = 135 bits (339), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 87/355 (24%), Positives = 166/355 (46%), Gaps = 6/355 (1%)
Query: 99 FLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQ 158
F +LI AY G +KA + + M G P+V+++T ++ A R G+ +A F +M
Sbjct: 397 FNVLIKAYANCGMLDKAMIIFNEMRDHGVKPNVLTYTTVIAALCRIGKMDDAMEKFNQMI 456
Query: 159 SSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAG 218
G P Y +++ F +A+E+ +++ + + D +F +I K G
Sbjct: 457 DQGVAPDKYAYHCLIQGFCTHGSLLKAKELISEIMN---NGMHLDIVLFSSIINNLCKLG 513
Query: 219 GYEKARKLFALMAERGVQQSTVTYNSLM---SFETNYKEVSKIYDQMQRAGLQPDVVSYA 275
A+ +F L G+ + V Y+ LM ++ +++D M AG++P+ V Y
Sbjct: 514 RVMDAQNIFDLTVNVGLHPTAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNDVVYG 573
Query: 276 LLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRD 335
L+N Y K R +E L++F EML G++P+ YNI++D +G A+ F M
Sbjct: 574 TLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTES 633
Query: 336 RCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKM 395
+ + C+Y+ +L + A F+ L+ ++IT T+I G + +E+
Sbjct: 634 GIAMNKCTYSIVLRGLFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQTRRVEEA 693
Query: 396 MEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKN 450
+++ + +G+ P ++ ++ K + A + M++ G PD + N
Sbjct: 694 KDLFASISRSGLVPCVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPDSRLLN 748
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/232 (25%), Positives = 104/232 (44%), Gaps = 7/232 (3%)
Query: 233 RGVQQSTVTYNSLMSFETNYKE---VSKIYDQMQRAGLQPDVVSYALLINAYGKARREEE 289
R + ++ TY LM T + Q+ R GL+ D++ L+ + +A+R +E
Sbjct: 105 RVLSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDIIIANHLLKGFCEAKRTDE 164
Query: 290 ALAVF-EEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRD--RCSPDICSYTT 346
AL + + G P +Y+ILL + G QA + + M CSPD+ +Y T
Sbjct: 165 ALDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPDVVAYNT 224
Query: 347 MLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNG 406
++ + D+ A F+ + Q G P+ +TY +++ K ++K +M G
Sbjct: 225 VIDGFFKEGDVNKACDLFKEMVQRGIPPDFVTYSSVVHALCKARAMDKAEAFLRQMVNKG 284
Query: 407 IKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILL-SLAK 457
+ PN + ++ Y + AV +KEM PD N+L+ SL K
Sbjct: 285 VLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVTFNMLMGSLCK 336
>gi|326503836|dbj|BAK02704.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 399
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 98/368 (26%), Positives = 182/368 (49%), Gaps = 9/368 (2%)
Query: 99 FLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQ 158
+ +L+ AY G ++AE V+S M + G PS + A ++ + + A +++RM+
Sbjct: 17 YALLLRAYCTAGSLHRAEGVISEMREHGIPPSATVYNAYLDGLLKARCAEKAVEVYQRMK 76
Query: 159 SSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAG 218
R + TY +++ ++ ++ + A +VF + + K + + ++ + + G
Sbjct: 77 RERCRTNTETYTLMINVYGKSKQPMSAMKVFKEM---QSIGCKANICTYTALVNAFAREG 133
Query: 219 GYEKARKLFALMAERGVQQSTVTYNSLMSFETNY---KEVSKIYDQMQRAGLQPDVVSYA 275
EKA ++F M + G + YN+LM + + S+I+ MQ G +PD SY
Sbjct: 134 LCEKAEEVFEEMQQAGHEPDVYAYNALMEAYSRAGFPQAASEIFSLMQHMGCEPDRASYN 193
Query: 276 LLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRD 335
+L++AYG+A EA AVFE + G+ PT K++ +LL A A SG V + V + +
Sbjct: 194 ILVDAYGRAGLHREAEAVFESLKRQGMAPTMKSHMLLLAAHARSGNVARCEEVMAQLHKS 253
Query: 336 RCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKM 395
+PD + ML+AY A ++ E+ +++ G +V TY + Y + LE+M
Sbjct: 254 GLAPDTIALNAMLNAYGRAGRLDDMERLLAAMERRG-TRDVGTYNVAVNAYGRAGYLERM 312
Query: 396 MEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSL 455
+ + G+ + +T+ M AY + K++ + ++EM G PD +L +
Sbjct: 313 EAAFASLERRGLAADVVTWTSRMGAYARKKEYRRCLEIFEEMVDAGCYPDAGTAKVL--V 370
Query: 456 AKTADERN 463
A +DER
Sbjct: 371 AACSDERQ 378
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 73/268 (27%), Positives = 133/268 (49%), Gaps = 6/268 (2%)
Query: 164 PSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKA 223
P+ TY ++L+ + A AE V ++ + E P P +++ + KA EKA
Sbjct: 12 PTEDTYALLLRAYCTAGSLHRAEGV-ISEMREHGIP--PSATVYNAYLDGLLKARCAEKA 68
Query: 224 RKLFALMAERGVQQSTVTYNSLMSFETNYKE---VSKIYDQMQRAGLQPDVVSYALLINA 280
+++ M + +T TY +++ K+ K++ +MQ G + ++ +Y L+NA
Sbjct: 69 VEVYQRMKRERCRTNTETYTLMINVYGKSKQPMSAMKVFKEMQSIGCKANICTYTALVNA 128
Query: 281 YGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPD 340
+ + E+A VFEEM AG P AYN L++A++ +G A +F M+ C PD
Sbjct: 129 FAREGLCEKAEEVFEEMQQAGHEPDVYAYNALMEAYSRAGFPQAASEIFSLMQHMGCEPD 188
Query: 341 ICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYD 400
SY ++ AY A AE F LK+ G P + ++ L+ +A+ N+ + E+
Sbjct: 189 RASYNILVDAYGRAGLHREAEAVFESLKRQGMAPTMKSHMLLLAAHARSGNVARCEEVMA 248
Query: 401 KMRVNGIKPNQTIFTTIMDAYGKNKDFD 428
++ +G+ P+ +++AYG+ D
Sbjct: 249 QLHKSGLAPDTIALNAMLNAYGRAGRLD 276
Score = 115 bits (289), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 74/324 (22%), Positives = 152/324 (46%), Gaps = 11/324 (3%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + ++I YGK A KV M G ++ ++TAL+ A+ R G + AE +F
Sbjct: 83 NTETYTLMINVYGKSKQPMSAMKVFKEMQSIGCKANICTYTALVNAFAREGLCEKAEEVF 142
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
MQ +G P Y +++ + A + A E+F + + +PD+ +++++ Y
Sbjct: 143 EEMQQAGHEPDVYAYNALMEAYSRAGFPQAASEIFSLM---QHMGCEPDRASYNILVDAY 199
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFET---NYKEVSKIYDQMQRAGLQPDV 271
+AG + +A +F + +G+ + ++ L++ N ++ Q+ ++GL PD
Sbjct: 200 GRAGLHREAEAVFESLKRQGMAPTMKSHMLLLAAHARSGNVARCEEVMAQLHKSGLAPDT 259
Query: 272 VSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKC 331
++ ++NAYG+A R ++ + M G R YN+ ++A+ +G +++ F
Sbjct: 260 IALNAMLNAYGRAGRLDDMERLLAAMERRGTRDV-GTYNVAVNAYGRAGYLERMEAAFAS 318
Query: 332 MRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNN 391
+ R + D+ ++T+ + AY + + F + G P+ T L+ +
Sbjct: 319 LERRGLAADVVTWTSRMGAYARKKEYRRCLEIFEEMVDAGCYPDAGTAKVLVAACSDERQ 378
Query: 392 LEKMMEIYDKMRVNGIKPNQTIFT 415
+E++ I M K +T+FT
Sbjct: 379 VEQVTAIVRSMH----KEAKTLFT 398
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 65/273 (23%), Positives = 129/273 (47%), Gaps = 5/273 (1%)
Query: 202 PDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNS----LMSFETNYKEVSK 257
P + + +++ Y AG +A + + M E G+ S YN+ L+ K V +
Sbjct: 12 PTEDTYALLLRAYCTAGSLHRAEGVISEMREHGIPPSATVYNAYLDGLLKARCAEKAV-E 70
Query: 258 IYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFA 317
+Y +M+R + + +Y L+IN YGK+++ A+ VF+EM G + Y L++AFA
Sbjct: 71 VYQRMKRERCRTNTETYTLMINVYGKSKQPMSAMKVFKEMQSIGCKANICTYTALVNAFA 130
Query: 318 ISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVI 377
G+ ++A VF+ M++ PD+ +Y ++ AY A + A + F ++ G P+
Sbjct: 131 REGLCEKAEEVFEEMQQAGHEPDVYAYNALMEAYSRAGFPQAASEIFSLMQHMGCEPDRA 190
Query: 378 TYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEM 437
+Y L+ Y + + +++ ++ G+ P ++ A+ ++ + ++
Sbjct: 191 SYNILVDAYGRAGLHREAEAVFESLKRQGMAPTMKSHMLLLAAHARSGNVARCEEVMAQL 250
Query: 438 ESCGFPPDQKAKNILLSLAKTADERNEANELLG 470
G PD A N +L+ A ++ LL
Sbjct: 251 HKSGLAPDTIALNAMLNAYGRAGRLDDMERLLA 283
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 105/222 (47%)
Query: 258 IYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFA 317
+Y + A P +YALL+ AY A A V EM + G+ P+ YN LD
Sbjct: 1 MYAALLEARCVPTEDTYALLLRAYCTAGSLHRAEGVISEMREHGIPPSATVYNAYLDGLL 60
Query: 318 ISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVI 377
+ ++A V++ M+R+RC + +YT M++ Y + A K F+ ++ G N+
Sbjct: 61 KARCAEKAVEVYQRMKRERCRTNTETYTLMINVYGKSKQPMSAMKVFKEMQSIGCKANIC 120
Query: 378 TYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEM 437
TY L+ +A+ EK E++++M+ G +P+ + +M+AY + +A + M
Sbjct: 121 TYTALVNAFAREGLCEKAEEVFEEMQQAGHEPDVYAYNALMEAYSRAGFPQAASEIFSLM 180
Query: 438 ESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEP 479
+ G PD+ + NIL+ A EA + + P
Sbjct: 181 QHMGCEPDRASYNILVDAYGRAGLHREAEAVFESLKRQGMAP 222
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 88/197 (44%)
Query: 293 VFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYV 352
++ +L+A PT Y +LL A+ +G + +A V MR P Y L +
Sbjct: 1 MYAALLEARCVPTEDTYALLLRAYCTAGSLHRAEGVISEMREHGIPPSATVYNAYLDGLL 60
Query: 353 NASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQT 412
A E A + ++R+K++ N TY +I Y K M+++ +M+ G K N
Sbjct: 61 KARCAEKAVEVYQRMKRERCRTNTETYTLMINVYGKSKQPMSAMKVFKEMQSIGCKANIC 120
Query: 413 IFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNF 472
+T +++A+ + + A ++EM+ G PD A N L+ A A+E+
Sbjct: 121 TYTALVNAFAREGLCEKAEEVFEEMQQAGHEPDVYAYNALMEAYSRAGFPQAASEIFSLM 180
Query: 473 NHPNNEPGINGLSISVD 489
H EP +I VD
Sbjct: 181 QHMGCEPDRASYNILVD 197
>gi|147788022|emb|CAN69338.1| hypothetical protein VITISV_032632 [Vitis vinifera]
Length = 585
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 102/420 (24%), Positives = 189/420 (45%), Gaps = 8/420 (1%)
Query: 101 MLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSS 160
+LI ++ A VL+ + K G P + T L+ G+ +A +F +M
Sbjct: 107 ILINSFCHLNRPGFAFSVLAKILKLGLQPDTATFTTLIRGLCVEGKIGDALHLFDKMIGE 166
Query: 161 GPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGY 220
G +P+ +TY ++ + A + ++ E+ +PD ++ +I K
Sbjct: 167 GFQPNVVTYGTLINGLCKVGNTNAAIRLLRSM---EQGNCQPDVVVYTSIIDSLCKDRQV 223
Query: 221 EKARKLFALMAERGVQQSTVTYNSLMSFETN---YKEVSKIYDQMQRAGLQPDVVSYALL 277
+A LF+ M +G+ TY SL+ N +K V+ + +QM + + PDVV ++ +
Sbjct: 224 TEAFNLFSKMVGQGISPDIFTYTSLIHSLCNLCEWKHVTTLLNQMINSKIMPDVVIFSTV 283
Query: 278 INAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRC 337
++A K + EA V + M+ GV P YN L+D + +D+A VF M +
Sbjct: 284 VDALCKEGKITEAHDVVDMMIIRGVEPNVVTYNALMDGHCLQSEMDEAVKVFDTMVHNGY 343
Query: 338 SPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMME 397
+P++ SY T+++ Y M+ A F + Q +PN +TY TL+ G V L+ +
Sbjct: 344 APNVISYNTLINGYCKIQRMDKATYLFEEMCQKELIPNTVTYNTLMHGLCHVGRLQDAIA 403
Query: 398 IYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAK 457
++ +M +G P+ + ++D K D A+ K +E PD + I++
Sbjct: 404 LFHEMVAHGQIPDLATYRILLDYLCKKSHLDEAMALLKTIEGSNMDPDIQIYTIVIDGMC 463
Query: 458 TADERNEANELLGNFNHPNNEPGINGLSISVDEEDDDDDDDEDDDDNIYHDGDGDGDGDD 517
A E A ++ N + P + +I ++ DE + ++ + DG+G D
Sbjct: 464 RAGELEAARDIFSNLSSKGLRPNVRTYTIMINGLCRRGLLDE--ANKLFMEMDGNGCSPD 521
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 105/400 (26%), Positives = 175/400 (43%), Gaps = 43/400 (10%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + + LI K G+ N A ++L M + P VV +T+++++ + + A +F
Sbjct: 171 NVVTYGTLINGLCKVGNTNAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTEAFNLF 230
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEE-KSPLKPDQKMFHMMIYM 213
+M G P TY ++ ++K TLL++ S + PD +F ++
Sbjct: 231 SKMVGQGISPDIFTYTSLIHSLCNLCEWKHVT----TLLNQMINSKIMPDVVIFSTVVDA 286
Query: 214 YKKAGGYEKARKLFALMAERGVQQSTVTYNSLM---SFETNYKEVSKIYDQMQRAGLQPD 270
K G +A + +M RGV+ + VTYN+LM ++ E K++D M G P+
Sbjct: 287 LCKEGKITEAHDVVDMMIIRGVEPNVVTYNALMDGHCLQSEMDEAVKVFDTMVHNGYAPN 346
Query: 271 VVSYALLINAYGKARRE-----------------------------------EEALAVFE 295
V+SY LIN Y K +R ++A+A+F
Sbjct: 347 VISYNTLINGYCKIQRMDKATYLFEEMCQKELIPNTVTYNTLMHGLCHVGRLQDAIALFH 406
Query: 296 EMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNAS 355
EM+ G P Y ILLD +D+A + K + PDI YT ++ A
Sbjct: 407 EMVAHGQIPDLATYRILLDYLCKKSHLDEAMALLKTIEGSNMDPDIQIYTIVIDGMCRAG 466
Query: 356 DMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFT 415
++E A F L G PNV TY +I G + L++ +++ +M NG P+ +
Sbjct: 467 ELEAARDIFSNLSSKGLRPNVRTYTIMINGLCRRGLLDEANKLFMEMDGNGCSPDGCTYN 526
Query: 416 TIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSL 455
TI +NK+ A+ +EM + GF D +L+ +
Sbjct: 527 TITQGLLQNKEALRAIQLLQEMLARGFSADVSTTTLLVEM 566
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 47/211 (22%), Positives = 96/211 (45%), Gaps = 3/211 (1%)
Query: 238 STVTYNSLMSF---ETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVF 294
STV +N L++ Y V + +QM G+ PDV + +LIN++ R A +V
Sbjct: 66 STVDFNRLLTSIAKTKQYPTVFSLSNQMDSFGIPPDVYTLNILINSFCHLNRPGFAFSVL 125
Query: 295 EEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNA 354
++L G++P + L+ + G + A +F M + P++ +Y T+++
Sbjct: 126 AKILKLGLQPDTATFTTLIRGLCVEGKIGDALHLFDKMIGEGFQPNVVTYGTLINGLCKV 185
Query: 355 SDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIF 414
+ A + R ++Q P+V+ Y ++I K + + ++ KM GI P+ +
Sbjct: 186 GNTNAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTEAFNLFSKMVGQGISPDIFTY 245
Query: 415 TTIMDAYGKNKDFDSAVVWYKEMESCGFPPD 445
T+++ + ++ +M + PD
Sbjct: 246 TSLIHSLCNLCEWKHVTTLLNQMINSKIMPD 276
Score = 39.3 bits (90), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 31/160 (19%), Positives = 58/160 (36%)
Query: 322 VDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGT 381
+D A + F M P + +L++ ++ G P+V T
Sbjct: 48 LDDALSSFNRMLHMHPPPSTVDFNRLLTSIAKTKQYPTVFSLSNQMDSFGIPPDVYTLNI 107
Query: 382 LIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCG 441
LI + +N + K+ G++P+ FTT++ A+ + +M G
Sbjct: 108 LINSFCHLNRPGFAFSVLAKILKLGLQPDTATFTTLIRGLCVEGKIGDALHLFDKMIGEG 167
Query: 442 FPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGI 481
F P+ L++ N A LL + N +P +
Sbjct: 168 FQPNVVTYGTLINGLCKVGNTNAAIRLLRSMEQGNCQPDV 207
>gi|302775582|ref|XP_002971208.1| hypothetical protein SELMODRAFT_94745 [Selaginella moellendorffii]
gi|300161190|gb|EFJ27806.1| hypothetical protein SELMODRAFT_94745 [Selaginella moellendorffii]
Length = 599
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 92/384 (23%), Positives = 174/384 (45%), Gaps = 6/384 (1%)
Query: 101 MLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSS 160
+LI K G N A + + G PS V++T+L+ + +A +F M
Sbjct: 15 ILIDGLAKAGKLNDARNLFQKLLHSGVTPSTVAYTSLIHGLCMANSFDDARELFADMNRR 74
Query: 161 GPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGY 220
G PS +TY +++ + +EA ++ ++++ P D ++ ++ K+
Sbjct: 75 GCPPSPVTYNVMIDASCKRGMLEEACDLIKKMIEDGHVP---DVVTYNTVMDGLCKSSRV 131
Query: 221 EKARKLFALMAERGVQQSTVTYNSL---MSFETNYKEVSKIYDQMQRAGLQPDVVSYALL 277
E+A LF M G + ++N++ + ++ + +++ +M+ + PD SY +L
Sbjct: 132 EEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEAKDIPPDSWSYGIL 191
Query: 278 INAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRC 337
I+ KA + EA +F+ MLD+G+ P+ YN+++ ++ +D+A +FK MR C
Sbjct: 192 IDGLAKAGKLNEAYKLFQRMLDSGITPSAVTYNVVIHGMCLAYTLDEALELFKSMRSKGC 251
Query: 338 SPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMME 397
P ++ ++ A+ ++ A + +R+ DG VP+V+TY TLI G + ++
Sbjct: 252 RPSRFTFNILIDAHCKRGKLDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARH 311
Query: 398 IYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAK 457
+ + M KP T++ K A M S G PD N L+
Sbjct: 312 LLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHC 371
Query: 458 TADERNEANELLGNFNHPNNEPGI 481
A + A ELL + P +
Sbjct: 372 RAGQTERARELLSDMVARGLAPNV 395
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 98/407 (24%), Positives = 173/407 (42%), Gaps = 41/407 (10%)
Query: 101 MLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSS 160
++I A K+G +A ++ M + G+ P VV++ +M+ + R + A +F M+
Sbjct: 85 VMIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGLCKSSRVEEALLLFNEMERL 144
Query: 161 GPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGY 220
G P+ ++ I+ + +K +A +VF + E + PD + ++I KAG
Sbjct: 145 GCTPNRRSHNTIILGLCQQSKIDQACQVFHEM---EAKDIPPDSWSYGILIDGLAKAGKL 201
Query: 221 EKARKLFALMAERGVQQSTVTYNSL---MSFETNYKEVSKIYDQMQRAGLQP-------- 269
+A KLF M + G+ S VTYN + M E +++ M+ G +P
Sbjct: 202 NEAYKLFQRMLDSGITPSAVTYNVVIHGMCLAYTLDEALELFKSMRSKGCRPSRFTFNIL 261
Query: 270 ---------------------------DVVSYALLINAYGKARREEEALAVFEEMLDAGV 302
DVV+Y+ LI+ R ++A + E+M+
Sbjct: 262 IDAHCKRGKLDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHLLEDMVKRQC 321
Query: 303 RPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEK 362
+PT N L+ +G + +AR V M SPD+ +Y T++ + A E A +
Sbjct: 322 KPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARE 381
Query: 363 FFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYG 422
+ G PNV+TY L+ G K N L + ++ +M+ +G PN +T ++ +
Sbjct: 382 LLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCAPNLFTYTALILGFC 441
Query: 423 KNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELL 469
D + + EM G PD L + + A E+L
Sbjct: 442 SAGQVDGGLKLFGEMVCAGISPDHVVYGTLAAELCKSGRSARALEIL 488
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 89/337 (26%), Positives = 161/337 (47%), Gaps = 16/337 (4%)
Query: 94 FNEMDFL----------MLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGR 143
FNEM+ L +I +Q ++A +V M K P S+ L++ +
Sbjct: 138 FNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEAKDIPPDSWSYGILIDGLAK 197
Query: 144 GGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPD 203
G+ A +F+RM SG PSA+TY +++ A EA E+F ++ +P
Sbjct: 198 AGKLNEAYKLFQRMLDSGITPSAVTYNVVIHGMCLAYTLDEALELFKSM---RSKGCRPS 254
Query: 204 QKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEV---SKIYD 260
+ F+++I + K G ++A +L M + G VTY++L+S + V + +
Sbjct: 255 RFTFNILIDAHCKRGKLDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHLLE 314
Query: 261 QMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISG 320
M + +P VV+ LI+ KA R +EA V + M+ +G P YN L+ +G
Sbjct: 315 DMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAG 374
Query: 321 MVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYG 380
++AR + M +P++ +YT ++S A+ + A F ++K G PN+ TY
Sbjct: 375 QTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCAPNLFTYT 434
Query: 381 TLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTI 417
LI G+ ++ ++++ +M GI P+ ++ T+
Sbjct: 435 ALILGFCSAGQVDGGLKLFGEMVCAGISPDHVVYGTL 471
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 88/397 (22%), Positives = 184/397 (46%), Gaps = 6/397 (1%)
Query: 88 IQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRY 147
+ S + + + LI F+ A ++ + MN++G PS V++ +++A + G
Sbjct: 37 LHSGVTPSTVAYTSLIHGLCMANSFDDARELFADMNRRGCPPSPVTYNVMIDASCKRGML 96
Query: 148 KNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMF 207
+ A + ++M G P +TY ++ ++++ +EA +F + E+ P+++
Sbjct: 97 EEACDLIKKMIEDGHVPDVVTYNTVMDGLCKSSRVEEALLLFNEM---ERLGCTPNRRSH 153
Query: 208 HMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSL---MSFETNYKEVSKIYDQMQR 264
+ +I + ++A ++F M + + + +Y L ++ E K++ +M
Sbjct: 154 NTIILGLCQQSKIDQACQVFHEMEAKDIPPDSWSYGILIDGLAKAGKLNEAYKLFQRMLD 213
Query: 265 AGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQ 324
+G+ P V+Y ++I+ A +EAL +F+ M G RP+ +NIL+DA G +D+
Sbjct: 214 SGITPSAVTYNVVIHGMCLAYTLDEALELFKSMRSKGCRPSRFTFNILIDAHCKRGKLDE 273
Query: 325 ARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIK 384
A + K M D PD+ +Y+T++S + + ++ A + + P V+T TLI
Sbjct: 274 AFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIH 333
Query: 385 GYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPP 444
G K +++ E+ D M +G P+ + T++ + + + A +M + G P
Sbjct: 334 GLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDMVARGLAP 393
Query: 445 DQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGI 481
+ L+S A+ EA + P +
Sbjct: 394 NVVTYTALVSGLCKANRLPEACGVFAQMKSSGCAPNL 430
Score = 130 bits (326), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 93/397 (23%), Positives = 174/397 (43%), Gaps = 20/397 (5%)
Query: 89 QSWWDFNEMD----------FLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALM 138
Q+ F+EM+ + +LI K G N+A K+ M G PS V++ ++
Sbjct: 168 QACQVFHEMEAKDIPPDSWSYGILIDGLAKAGKLNEAYKLFQRMLDSGITPSAVTYNVVI 227
Query: 139 EAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKS 198
A +F+ M+S G RPS T+ I++ + K EA + + D+
Sbjct: 228 HGMCLAYTLDEALELFKSMRSKGCRPSRFTFNILIDAHCKRGKLDEAFRLLKRMTDDGHV 287
Query: 199 PLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSL---MSFETNYKEV 255
P D + +I + AR L M +R + + VT N+L + KE
Sbjct: 288 P---DVVTYSTLISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEA 344
Query: 256 SKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDA 315
++ D M +G PDVV+Y L++ + +A + E A + +M+ G+ P Y L+
Sbjct: 345 REVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSG 404
Query: 316 FAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPN 375
+ + +A VF M+ C+P++ +YT ++ + +A ++G K F + G P+
Sbjct: 405 LCKANRLPEACGVFAQMKSSGCAPNLFTYTALILGFCSAGQVDGGLKLFGEMVCAGISPD 464
Query: 376 VITYGTLIKGYAKVNNLEKMMEIYDKMR--VNGIKPNQTIFTTIMDAYGKNKDFDSAVVW 433
+ YGTL K + +EI + R + ++ +D + + A+ +
Sbjct: 465 HVVYGTLAAELCKSGRSARALEILREGRESLRSEAWGDEVYRFAVDGLLEAGKMEMALGF 524
Query: 434 YKEMESCG-FPPDQKAKNILLSLAKTADERNEANELL 469
++M G P ++ +++ L K+ + EA +L
Sbjct: 525 VRDMVRGGQLPAPERCASLVAGLCKSG-QGGEARAVL 560
Score = 121 bits (304), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 77/285 (27%), Positives = 133/285 (46%), Gaps = 3/285 (1%)
Query: 200 LKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSL---MSFETNYKEVS 256
+ PD + ++I KAG AR LF + GV STV Y SL + ++ +
Sbjct: 6 VSPDSWSYGILIDGLAKAGKLNDARNLFQKLLHSGVTPSTVAYTSLIHGLCMANSFDDAR 65
Query: 257 KIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAF 316
+++ M R G P V+Y ++I+A K EEA + ++M++ G P YN ++D
Sbjct: 66 ELFADMNRRGCPPSPVTYNVMIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGL 125
Query: 317 AISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNV 376
S V++A +F M R C+P+ S+ T++ S ++ A + F ++ P+
Sbjct: 126 CKSSRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEAKDIPPDS 185
Query: 377 ITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKE 436
+YG LI G AK L + +++ +M +GI P+ + ++ D A+ +K
Sbjct: 186 WSYGILIDGLAKAGKLNEAYKLFQRMLDSGITPSAVTYNVVIHGMCLAYTLDEALELFKS 245
Query: 437 MESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGI 481
M S G P + NIL+ + +EA LL + P +
Sbjct: 246 MRSKGCRPSRFTFNILIDAHCKRGKLDEAFRLLKRMTDDGHVPDV 290
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 106/208 (50%)
Query: 262 MQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGM 321
M + PD SY +LI+ KA + +A +F+++L +GV P+ AY L+ ++
Sbjct: 1 MNERNVSPDSWSYGILIDGLAKAGKLNDARNLFQKLLHSGVTPSTVAYTSLIHGLCMANS 60
Query: 322 VDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGT 381
D AR +F M R C P +Y M+ A +E A +++ +DG VP+V+TY T
Sbjct: 61 FDDARELFADMNRRGCPPSPVTYNVMIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNT 120
Query: 382 LIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCG 441
++ G K + +E+ + ++++M G PN+ TI+ + D A + EME+
Sbjct: 121 VMDGLCKSSRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEAKD 180
Query: 442 FPPDQKAKNILLSLAKTADERNEANELL 469
PPD + IL+ A + NEA +L
Sbjct: 181 IPPDSWSYGILIDGLAKAGKLNEAYKLF 208
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 62/273 (22%), Positives = 122/273 (44%), Gaps = 3/273 (1%)
Query: 230 MAERGVQQSTVTYNSL---MSFETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARR 286
M ER V + +Y L ++ + ++ ++ +G+ P V+Y LI+ A
Sbjct: 1 MNERNVSPDSWSYGILIDGLAKAGKLNDARNLFQKLLHSGVTPSTVAYTSLIHGLCMANS 60
Query: 287 EEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTT 346
++A +F +M G P+ YN+++DA GM+++A + K M D PD+ +Y T
Sbjct: 61 FDDARELFADMNRRGCPPSPVTYNVMIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNT 120
Query: 347 MLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNG 406
++ +S +E A F +++ G PN ++ T+I G + + +++ +++ +M
Sbjct: 121 VMDGLCKSSRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEAKD 180
Query: 407 IKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEAN 466
I P+ + ++D K + A ++ M G P N+++ A +EA
Sbjct: 181 IPPDSWSYGILIDGLAKAGKLNEAYKLFQRMLDSGITPSAVTYNVVIHGMCLAYTLDEAL 240
Query: 467 ELLGNFNHPNNEPGINGLSISVDEEDDDDDDDE 499
EL + P +I +D DE
Sbjct: 241 ELFKSMRSKGCRPSRFTFNILIDAHCKRGKLDE 273
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 103/226 (45%), Gaps = 13/226 (5%)
Query: 81 EVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEA 140
EVL+ + + S + + + L+ + + G +A ++LS M +G AP+VV++TAL+
Sbjct: 346 EVLDAM-VSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSG 404
Query: 141 YGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPL 200
+ R A +F +M+SSG P+ TY ++ F A + ++F ++ + +
Sbjct: 405 LCKANRLPEACGVFAQMKSSGCAPNLFTYTALILGFCSAGQVDGGLKLFGEMV---CAGI 461
Query: 201 KPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETN-YKEVSKI- 258
PD ++ + K+G AR L L R +S + + F + E K+
Sbjct: 462 SPDHVVYGTLAAELCKSG--RSARALEILREGRESLRSEAWGDEVYRFAVDGLLEAGKME 519
Query: 259 -----YDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLD 299
M R G P A L+ K+ + EA AV EE++D
Sbjct: 520 MALGFVRDMVRGGQLPAPERCASLVAGLCKSGQGGEARAVLEEIMD 565
>gi|242039015|ref|XP_002466902.1| hypothetical protein SORBIDRAFT_01g016180 [Sorghum bicolor]
gi|241920756|gb|EER93900.1| hypothetical protein SORBIDRAFT_01g016180 [Sorghum bicolor]
Length = 653
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 93/403 (23%), Positives = 189/403 (46%), Gaps = 7/403 (1%)
Query: 70 LKQLKKWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAP 129
L K+W V +++E + ++ N + F LI + G F + +VL+ M G P
Sbjct: 235 LCMAKRWGRVQDLMEEM-VRVGCPPNVVTFNTLIGYLCRNGLFERVHQVLAQMVDHGCTP 293
Query: 130 SVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVF 189
+ + +++ + G + A I RM S G +P+ + Y +LK A ++++AEE+
Sbjct: 294 DIRMYATVLDGVCKEGHLEVAHEILDRMPSYGLKPNVVCYNTVLKGLCSAERWEQAEELL 353
Query: 190 MTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSF- 248
+ D + PL D F++++ + + G + +L M E G +TY ++++
Sbjct: 354 AEMFDND-CPL--DDVTFNILVDFFCQNGLVYRVIELLEQMLEHGCVPDVITYTTVINGF 410
Query: 249 --ETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTH 306
E E + M G +P+ +SY +++ A R +A + +M++ G P
Sbjct: 411 CKEGLIDEAVMLLKSMAACGCRPNTISYTIVLKGLCSAERWVDAEDLMSQMIEQGCSPNP 470
Query: 307 KAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRR 366
+N +++ G+V+QA + K M + CSPD+ SY+T++ A + A +
Sbjct: 471 VTFNTVINFLCKKGLVEQAIELLKQMLLNGCSPDLISYSTVIDGLGKAGKTDEALELLNV 530
Query: 367 LKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKD 426
+ G PN I Y ++ +K + ++++++D ++ I+ + ++ ++ + K
Sbjct: 531 MVNKGMSPNTIIYSSIASALSKEGRINRVIQMFDNIQDVTIRSDAVLYNAVISSLCKRGG 590
Query: 427 FDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELL 469
D A+ + M S G P++ IL+ + EA E+L
Sbjct: 591 TDRAIEFLAYMVSSGCMPNESTYTILIRGLASEGFVKEAQEML 633
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 83/379 (21%), Positives = 172/379 (45%), Gaps = 10/379 (2%)
Query: 100 LMLITAYGKQGDFNKAEKVLSFMNKK-GYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQ 158
L+L + G ++A ++L + G P VVS+ A+++ R+ + + M
Sbjct: 193 LVLNAVCDQGGSVDEALRLLRDLPTSFGCDPDVVSYNAVLKGLCMAKRWGRVQDLMEEMV 252
Query: 159 SSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAG 218
G P+ +T+ ++ F+ +V ++D +P D +M+ ++ K G
Sbjct: 253 RVGCPPNVVTFNTLIGYLCRNGLFERVHQVLAQMVDHGCTP---DIRMYATVLDGVCKEG 309
Query: 219 GYEKARKLFALMAERGVQQSTVTYNSLM---SFETNYKEVSKIYDQMQRAGLQPDVVSYA 275
E A ++ M G++ + V YN+++ +++ ++ +M D V++
Sbjct: 310 HLEVAHEILDRMPSYGLKPNVVCYNTVLKGLCSAERWEQAEELLAEMFDNDCPLDDVTFN 369
Query: 276 LLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRD 335
+L++ + + + + E+ML+ G P Y +++ F G++D+A + K M
Sbjct: 370 ILVDFFCQNGLVYRVIELLEQMLEHGCVPDVITYTTVINGFCKEGLIDEAVMLLKSMAAC 429
Query: 336 RCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKM 395
C P+ SYT +L +A AE ++ + G PN +T+ T+I K +E+
Sbjct: 430 GCRPNTISYTIVLKGLCSAERWVDAEDLMSQMIEQGCSPNPVTFNTVINFLCKKGLVEQA 489
Query: 396 MEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSL 455
+E+ +M +NG P+ ++T++D GK D A+ M + G P+ I S+
Sbjct: 490 IELLKQMLLNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTI---IYSSI 546
Query: 456 AKTADERNEANELLGNFNH 474
A + N ++ F++
Sbjct: 547 ASALSKEGRINRVIQMFDN 565
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 73/352 (20%), Positives = 157/352 (44%), Gaps = 43/352 (12%)
Query: 59 PKDLVLGTLVR-LKQLKKWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEK 117
P + T+++ L ++W E+L + + +++ F +L+ + + G + +
Sbjct: 328 PNVVCYNTVLKGLCSAERWEQAEELLAEM-FDNDCPLDDVTFNILVDFFCQNGLVYRVIE 386
Query: 118 VLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFV 177
+L M + G P V+++T ++ + + G A + + M + G RP+ ++Y I+LK
Sbjct: 387 LLEQMLEHGCVPDVITYTTVINGFCKEGLIDEAVMLLKSMAACGCRPNTISYTIVLKGLC 446
Query: 178 EANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQ 237
A ++ +AE+ L + M E+G
Sbjct: 447 SAERWVDAED--------------------------------------LMSQMIEQGCSP 468
Query: 238 STVTYNSLMSFETN---YKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVF 294
+ VT+N++++F ++ ++ QM G PD++SY+ +I+ GKA + +EAL +
Sbjct: 469 NPVTFNTVINFLCKKGLVEQAIELLKQMLLNGCSPDLISYSTVIDGLGKAGKTDEALELL 528
Query: 295 EEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNA 354
M++ G+ P Y+ + A + G +++ +F ++ D Y ++S+
Sbjct: 529 NVMVNKGMSPNTIIYSSIASALSKEGRINRVIQMFDNIQDVTIRSDAVLYNAVISSLCKR 588
Query: 355 SDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNG 406
+ A +F + G +PN TY LI+G A +++ E+ ++ G
Sbjct: 589 GGTDRAIEFLAYMVSSGCMPNESTYTILIRGLASEGFVKEAQEMLTELCSKG 640
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 83/393 (21%), Positives = 158/393 (40%), Gaps = 43/393 (10%)
Query: 112 FNKAEKVLSFMNKKGYAPSVVSHTALMEAYG-RGGRYKNAEAIFRRMQSS-GPRPSALTY 169
F A +VL ++ +G A V + ++ A +GG A + R + +S G P ++Y
Sbjct: 169 FRSAVRVLQDLHGRGCALDVGNCNLVLNAVCDQGGSVDEALRLLRDLPTSFGCDPDVVSY 228
Query: 170 QIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFAL 229
+LK A ++ +++ ++ + P+ F+ +I + G +E+ ++ A
Sbjct: 229 NAVLKGLCMAKRWGRVQDLMEEMV---RVGCPPNVVTFNTLIGYLCRNGLFERVHQVLAQ 285
Query: 230 MAERGVQQSTVTYNSLM---SFETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARR 286
M + G Y +++ E + + +I D+M GL+P+VV Y ++ A R
Sbjct: 286 MVDHGCTPDIRMYATVLDGVCKEGHLEVAHEILDRMPSYGLKPNVVCYNTVLKGLCSAER 345
Query: 287 EEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTT 346
E+A + EM D +NIL+D F +G+V Y
Sbjct: 346 WEQAEELLAEMFDNDCPLDDVTFNILVDFFCQNGLV---------------------YRV 384
Query: 347 MLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNG 406
+ + ++ + G VP+VITY T+I G+ K +++ + + M G
Sbjct: 385 I--------------ELLEQMLEHGCVPDVITYTTVINGFCKEGLIDEAVMLLKSMAACG 430
Query: 407 IKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEAN 466
+PN +T ++ + + A +M G P+ N +++ +A
Sbjct: 431 CRPNTISYTIVLKGLCSAERWVDAEDLMSQMIEQGCSPNPVTFNTVINFLCKKGLVEQAI 490
Query: 467 ELLGNFNHPNNEPGINGLSISVDEEDDDDDDDE 499
ELL P + S +D DE
Sbjct: 491 ELLKQMLLNGCSPDLISYSTVIDGLGKAGKTDE 523
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/270 (22%), Positives = 108/270 (40%), Gaps = 42/270 (15%)
Query: 242 YNSLMSFETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAG 301
YN+++S +++ + P+ +Y ++ A R +AL+V +EM G
Sbjct: 86 YNAMVSGYCRAGQLASARRLAASVPVPPNAYTYFPVVRALCARGRIADALSVLDEMRRRG 145
Query: 302 VRPTHKAYNILLDA---------------------------------FAISGMVDQARTV 328
P Y+++L+A ++ + DQ +V
Sbjct: 146 CAPIPPMYHVILEAACSRGGGGGFRSAVRVLQDLHGRGCALDVGNCNLVLNAVCDQGGSV 205
Query: 329 FKCMRRDR-------CSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGT 381
+ +R R C PD+ SY +L A + + + G PNV+T+ T
Sbjct: 206 DEALRLLRDLPTSFGCDPDVVSYNAVLKGLCMAKRWGRVQDLMEEMVRVGCPPNVVTFNT 265
Query: 382 LIKGYAKVNNL-EKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESC 440
LI GY N L E++ ++ +M +G P+ ++ T++D K + A M S
Sbjct: 266 LI-GYLCRNGLFERVHQVLAQMVDHGCTPDIRMYATVLDGVCKEGHLEVAHEILDRMPSY 324
Query: 441 GFPPDQKAKNILLSLAKTADERNEANELLG 470
G P+ N +L +A+ +A ELL
Sbjct: 325 GLKPNVVCYNTVLKGLCSAERWEQAEELLA 354
>gi|255661148|gb|ACU25743.1| pentatricopeptide repeat-containing protein [Verbena bonariensis]
Length = 425
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 96/374 (25%), Positives = 183/374 (48%), Gaps = 37/374 (9%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
LI K D++KA + S + + G+ P +V++ A++ +G+ ++ A ++ M+++G
Sbjct: 50 LIELSRKLCDYSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMRTAG 109
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
P+ +Y +L ++VE KF EA +F + E K L D ++MI +Y + G +
Sbjct: 110 VTPNTASYSTLLTMYVENKKFLEALSIFAEM-REIKCLL--DLTTCNIMIDVYGQLGMAK 166
Query: 222 KARKLFALMAERGVQQSTVTYNSLMSFETN---YKEVSKIYDQMQRAGLQPDVVSYALLI 278
+A KLF M + G++ + V+YN+L+ + + E ++ MQR ++ +VV+Y ++
Sbjct: 167 EADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMM 226
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCS 338
YGK E+A + +EM + G+ P Y+ ++ + G +D+A +F+ +R
Sbjct: 227 MIYGKTLEHEKANNLIQEMQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVD 286
Query: 339 PDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVP------------------------ 374
D Y TM+ AY A + A++ LK+ +P
Sbjct: 287 IDQVLYQTMIVAYERAGLVAHAKRLLHELKRPDNIPRDIAIHILAGAGRIEEATWVFRQA 346
Query: 375 -------NVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDF 427
++ + +I ++K ++E++DKMR G P+ + +++AYGK +F
Sbjct: 347 IDAGEVKDITVFERMIHLFSKYKKYGNVVEVFDKMRGLGYFPDSNVIALVLNAYGKLHEF 406
Query: 428 DSAVVWYKEMESCG 441
D A Y EM+ G
Sbjct: 407 DKANDVYMEMQEVG 420
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 84/318 (26%), Positives = 146/318 (45%), Gaps = 38/318 (11%)
Query: 200 LKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFE---TNYKEVS 256
L PD+ + +I + K G ++ A M + V V Y++L+ +Y +
Sbjct: 5 LSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDYSKAI 64
Query: 257 KIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAF 316
I+ +++R+G PD+V+Y +IN +GKA+ EA ++ EM AGV P +Y+ LL +
Sbjct: 65 SIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVTPNTASYSTLLTMY 124
Query: 317 AISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNV 376
+ +A ++F MR +C D+ + M+ Y + A+K F +++ G PNV
Sbjct: 125 VENKKFLEALSIFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNV 184
Query: 377 ITYGTLIKGYA---------------KVNNLEK-------MMEIYDK------------- 401
++Y TL++ Y + N+E+ MM IY K
Sbjct: 185 VSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLIQE 244
Query: 402 MRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADE 461
M+ GI+PN ++TI+ +GK D A + ++++ S G DQ ++ + A
Sbjct: 245 MQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVDIDQVLYQTMIVAYERAGL 304
Query: 462 RNEANELLGNFNHPNNEP 479
A LL P+N P
Sbjct: 305 VAHAKRLLHELKRPDNIP 322
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 45/181 (24%), Positives = 79/181 (43%)
Query: 301 GVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGA 360
+ P Y+ L+ F G+ D A + + M +DR D+ Y+ ++ D A
Sbjct: 4 ALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDYSKA 63
Query: 361 EKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDA 420
F RLK+ GF P+++ Y +I + K + + +MR G+ PN ++T++
Sbjct: 64 ISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVTPNTASYSTLLTM 123
Query: 421 YGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPG 480
Y +NK F A+ + EM D NI++ + EA++L EP
Sbjct: 124 YVENKKFLEALSIFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPN 183
Query: 481 I 481
+
Sbjct: 184 V 184
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/244 (22%), Positives = 114/244 (46%), Gaps = 6/244 (2%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + + L+ YG F +A + M +K +VV++ ++M YG+ ++ A +
Sbjct: 183 NVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLI 242
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
+ MQ+ G P+++TY I+ ++ + K A +F L S + DQ ++ MI Y
Sbjct: 243 QEMQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKL---RSSGVDIDQVLYQTMIVAY 299
Query: 215 KKAGGYEKARKLFA-LMAERGVQQSTVTYNSLMSFETNYKEVSKIYDQMQRAGLQPDVVS 273
++AG A++L L + + + +++ +E + ++ Q AG D+
Sbjct: 300 ERAGLVAHAKRLLHELKRPDNIPRDIAIH--ILAGAGRIEEATWVFRQAIDAGEVKDITV 357
Query: 274 YALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMR 333
+ +I+ + K ++ + VF++M G P ++L+A+ D+A V+ M+
Sbjct: 358 FERMIHLFSKYKKYGNVVEVFDKMRGLGYFPDSNVIALVLNAYGKLHEFDKANDVYMEMQ 417
Query: 334 RDRC 337
C
Sbjct: 418 EVGC 421
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/123 (22%), Positives = 64/123 (52%)
Query: 333 RRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNL 392
R SPD +Y+T+++ + + A + ++++QD +++ Y LI+ K+ +
Sbjct: 1 RERALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDY 60
Query: 393 EKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNIL 452
K + I+ +++ +G P+ + +++ +GK K F A EM + G P+ + + L
Sbjct: 61 SKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVTPNTASYSTL 120
Query: 453 LSL 455
L++
Sbjct: 121 LTM 123
>gi|356529971|ref|XP_003533559.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g19890-like [Glycine max]
Length = 693
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 98/348 (28%), Positives = 174/348 (50%), Gaps = 7/348 (2%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N ++F +I K+G +A ++L M +G+ P+V +HTAL++ + G + A +F
Sbjct: 271 NLINFTCMIEGLCKRGSVKQAFEMLEEMVGRGWKPNVYTHTALIDGLCKKGWTEKAFRLF 330
Query: 155 RRM-QSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYM 213
++ +S +P+ LTY ++ + K AE M L ++ L P+ + +I
Sbjct: 331 LKLVRSENHKPNVLTYTAMISGYCRDEKMNRAE---MLLSRMKEQGLAPNTNTYTTLIDG 387
Query: 214 YKKAGGYEKARKLFALMAERGVQQSTVTYNSL---MSFETNYKEVSKIYDQMQRAGLQPD 270
+ KAG +E+A +L +M E G + TYN++ + + +E K+ R GL D
Sbjct: 388 HCKAGNFERAYELMNVMNEEGFSPNVCTYNAIVDGLCKKGRVQEAYKVLKSGFRNGLDAD 447
Query: 271 VVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFK 330
V+Y +LI+ + K ++AL +F +M+ +G++P +Y L+ F + ++ F+
Sbjct: 448 KVTYTILISEHCKQAEIKQALVLFNKMVKSGIQPDIHSYTTLIAVFCREKRMKESEMFFE 507
Query: 331 CMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVN 390
R P +YT+M+ Y ++ A KFF R+ G + ITYG LI G K +
Sbjct: 508 EAVRFGLVPTNKTYTSMICGYCREGNLRLALKFFHRMSDHGCASDSITYGALISGLCKQS 567
Query: 391 NLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEME 438
L++ +YD M G+ P + T+ Y K D SA+V + +E
Sbjct: 568 KLDEARCLYDAMIEKGLTPCEVTRVTLAYEYCKIDDGCSAMVVLERLE 615
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 81/355 (22%), Positives = 156/355 (43%), Gaps = 5/355 (1%)
Query: 101 MLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSS 160
+++ + ++G +A + G P++++ T ++E + G K A + M
Sbjct: 242 LIVREFCEKGFVTRALWYFRRFCEMGLRPNLINFTCMIEGLCKRGSVKQAFEMLEEMVGR 301
Query: 161 GPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGY 220
G +P+ T+ ++ + ++A +F+ L+ E KP+ + MI Y +
Sbjct: 302 GWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSENH--KPNVLTYTAMISGYCRDEKM 359
Query: 221 EKARKLFALMAERGVQQSTVTYNSLMSFET---NYKEVSKIYDQMQRAGLQPDVVSYALL 277
+A L + M E+G+ +T TY +L+ N++ ++ + M G P+V +Y +
Sbjct: 360 NRAEMLLSRMKEQGLAPNTNTYTTLIDGHCKAGNFERAYELMNVMNEEGFSPNVCTYNAI 419
Query: 278 INAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRC 337
++ K R +EA V + G+ Y IL+ + QA +F M +
Sbjct: 420 VDGLCKKGRVQEAYKVLKSGFRNGLDADKVTYTILISEHCKQAEIKQALVLFNKMVKSGI 479
Query: 338 SPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMME 397
PDI SYTT+++ + M+ +E FF + G VP TY ++I GY + NL ++
Sbjct: 480 QPDIHSYTTLIAVFCREKRMKESEMFFEEAVRFGLVPTNKTYTSMICGYCREGNLRLALK 539
Query: 398 IYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNIL 452
+ +M +G + + ++ K D A Y M G P + + L
Sbjct: 540 FFHRMSDHGCASDSITYGALISGLCKQSKLDEARCLYDAMIEKGLTPCEVTRVTL 594
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 89/358 (24%), Positives = 147/358 (41%), Gaps = 48/358 (13%)
Query: 170 QIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFAL 229
Q ++K F E + KEA E+ +++ L P K + ++ + + G E A LF
Sbjct: 136 QCMVKSFAEIGRVKEAIEM---VIEMHNQGLAPSTKTLNWVVKIVTEMGLVEYAENLFDE 192
Query: 230 MAERGVQQSTVTYNSLM----------------------SFETNYKEVSKI--------- 258
M RGVQ + V+Y ++ F + +S I
Sbjct: 193 MCARGVQPNCVSYRVMVVGYCKLGNVLESDRWLGGMIERGFVVDNATLSLIVREFCEKGF 252
Query: 259 -------YDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNI 311
+ + GL+P+++++ +I K ++A + EEM+ G +P +
Sbjct: 253 VTRALWYFRRFCEMGLRPNLINFTCMIEGLCKRGSVKQAFEMLEEMVGRGWKPNVYTHTA 312
Query: 312 LLDAFAISGMVDQA-RTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQD 370
L+D G ++A R K +R + P++ +YT M+S Y M AE R+K+
Sbjct: 313 LIDGLCKKGWTEKAFRLFLKLVRSENHKPNVLTYTAMISGYCRDEKMNRAEMLLSRMKEQ 372
Query: 371 GFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSA 430
G PN TY TLI G+ K N E+ E+ + M G PN + I+D K A
Sbjct: 373 GLAPNTNTYTTLIDGHCKAGNFERAYELMNVMNEEGFSPNVCTYNAIVDGLCKKGRVQEA 432
Query: 431 VVWYKEMESC---GFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGINGLS 485
YK ++S G D+ IL+S E +A L +P I+ +
Sbjct: 433 ---YKVLKSGFRNGLDADKVTYTILISEHCKQAEIKQALVLFNKMVKSGIQPDIHSYT 487
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 77/364 (21%), Positives = 167/364 (45%), Gaps = 7/364 (1%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + + +++ Y K G+ ++++ L M ++G+ + + ++ + G A F
Sbjct: 201 NCVSYRVMVVGYCKLGNVLESDRWLGGMIERGFVVDNATLSLIVREFCEKGFVTRALWYF 260
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
RR G RP+ + + +++ + K+A E+ ++ KP+ +I
Sbjct: 261 RRFCEMGLRPNLINFTCMIEGLCKRGSVKQAFEMLEEMVGR---GWKPNVYTHTALIDGL 317
Query: 215 KKAGGYEKARKLFA-LMAERGVQQSTVTYNSLMSFETNYKEVSK---IYDQMQRAGLQPD 270
K G EKA +LF L+ + + +TY +++S +++++ + +M+ GL P+
Sbjct: 318 CKKGWTEKAFRLFLKLVRSENHKPNVLTYTAMISGYCRDEKMNRAEMLLSRMKEQGLAPN 377
Query: 271 VVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFK 330
+Y LI+ + KA E A + M + G P YN ++D G V +A V K
Sbjct: 378 TNTYTTLIDGHCKAGNFERAYELMNVMNEEGFSPNVCTYNAIVDGLCKKGRVQEAYKVLK 437
Query: 331 CMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVN 390
R+ D +YT ++S + ++++ A F ++ + G P++ +Y TLI + +
Sbjct: 438 SGFRNGLDADKVTYTILISEHCKQAEIKQALVLFNKMVKSGIQPDIHSYTTLIAVFCREK 497
Query: 391 NLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKN 450
+++ +++ G+ P +T+++ Y + + A+ ++ M G D
Sbjct: 498 RMKESEMFFEEAVRFGLVPTNKTYTSMICGYCREGNLRLALKFFHRMSDHGCASDSITYG 557
Query: 451 ILLS 454
L+S
Sbjct: 558 ALIS 561
Score = 101 bits (252), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 76/360 (21%), Positives = 152/360 (42%), Gaps = 44/360 (12%)
Query: 136 ALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDE 195
+++++ GR K A + M + G PS T ++K+ E + AE +F DE
Sbjct: 137 CMVKSFAEIGRVKEAIEMVIEMHNQGLAPSTKTLNWVVKIVTEMGLVEYAENLF----DE 192
Query: 196 EKS-PLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKE 254
+ ++P+ + +M+ Y K G ++ + M ERG T + ++
Sbjct: 193 MCARGVQPNCVSYRVMVVGYCKLGNVLESDRWLGGMIERGFVVDNATLSLIVREFCEKGF 252
Query: 255 VSKI---YDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNI 311
V++ + + GL+P+++++ +I K ++A + EEM+ G +P +
Sbjct: 253 VTRALWYFRRFCEMGLRPNLINFTCMIEGLCKRGSVKQAFEMLEEMVGRGWKPNVYTHTA 312
Query: 312 LLDAFAISGMVDQA-RTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQ- 369
L+D G ++A R K +R + P++ +YT M+S Y M AE R+K+
Sbjct: 313 LIDGLCKKGWTEKAFRLFLKLVRSENHKPNVLTYTAMISGYCRDEKMNRAEMLLSRMKEQ 372
Query: 370 ----------------------------------DGFVPNVITYGTLIKGYAKVNNLEKM 395
+GF PNV TY ++ G K +++
Sbjct: 373 GLAPNTNTYTTLIDGHCKAGNFERAYELMNVMNEEGFSPNVCTYNAIVDGLCKKGRVQEA 432
Query: 396 MEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSL 455
++ NG+ ++ +T ++ + K + A+V + +M G PD + L+++
Sbjct: 433 YKVLKSGFRNGLDADKVTYTILISEHCKQAEIKQALVLFNKMVKSGIQPDIHSYTTLIAV 492
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 72/343 (20%), Positives = 155/343 (45%), Gaps = 7/343 (2%)
Query: 110 GDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTY 169
G AE + M +G P+ VS+ ++ Y + G ++ M G T
Sbjct: 181 GLVEYAENLFDEMCARGVQPNCVSYRVMVVGYCKLGNVLESDRWLGGMIERGFVVDNATL 240
Query: 170 QIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFAL 229
+I++ F E A F + L+P+ F MI K G ++A ++
Sbjct: 241 SLIVREFCEKGFVTRALWYFRRFCE---MGLRPNLINFTCMIEGLCKRGSVKQAFEMLEE 297
Query: 230 MAERGVQQSTVTYNSLMS--FETNYKEVS-KIYDQMQRA-GLQPDVVSYALLINAYGKAR 285
M RG + + T+ +L+ + + E + +++ ++ R+ +P+V++Y +I+ Y +
Sbjct: 298 MVGRGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSENHKPNVLTYTAMISGYCRDE 357
Query: 286 REEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYT 345
+ A + M + G+ P Y L+D +G ++A + M + SP++C+Y
Sbjct: 358 KMNRAEMLLSRMKEQGLAPNTNTYTTLIDGHCKAGNFERAYELMNVMNEEGFSPNVCTYN 417
Query: 346 TMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVN 405
++ ++ A K + ++G + +TY LI + K +++ + +++KM +
Sbjct: 418 AIVDGLCKKGRVQEAYKVLKSGFRNGLDADKVTYTILISEHCKQAEIKQALVLFNKMVKS 477
Query: 406 GIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKA 448
GI+P+ +TT++ + + K + ++++E G P K
Sbjct: 478 GIQPDIHSYTTLIAVFCREKRMKESEMFFEEAVRFGLVPTNKT 520
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 82/208 (39%), Gaps = 41/208 (19%)
Query: 93 DFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEA 152
D +++ + +LI+ + KQ + +A + + M K G P + S+T L+ + R R K +E
Sbjct: 445 DADKVTYTILISEHCKQAEIKQALVLFNKMVKSGIQPDIHSYTTLIAVFCREKRMKESEM 504
Query: 153 IFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIY 212
F EA +F L P K + MI
Sbjct: 505 FFE----------------------EAVRFG----------------LVPTNKTYTSMIC 526
Query: 213 MYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSF---ETNYKEVSKIYDQMQRAGLQP 269
Y + G A K F M++ G ++TY +L+S ++ E +YD M GL P
Sbjct: 527 GYCREGNLRLALKFFHRMSDHGCASDSITYGALISGLCKQSKLDEARCLYDAMIEKGLTP 586
Query: 270 DVVSYALLINAYGKARREEEALAVFEEM 297
V+ L Y K A+ V E +
Sbjct: 587 CEVTRVTLAYEYCKIDDGCSAMVVLERL 614
>gi|357499777|ref|XP_003620177.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495192|gb|AES76395.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 612
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 109/417 (26%), Positives = 200/417 (47%), Gaps = 12/417 (2%)
Query: 59 PKDLVLGTLVRLKQLKKWNVVSEVLEWL--RIQSWWDFNEMDFLMLITAYGKQGDFNKAE 116
P + L TL++ LK + + L + + + N++ + LI K G + A
Sbjct: 124 PNAITLTTLIKGLCLKGQ--IHQALHFHDKVVALGFHLNKVCYGTLINGLCKVGQTSAAL 181
Query: 117 KVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLF 176
++L ++ K P+VV + ++++ + A ++ M S G P +TY ++ F
Sbjct: 182 QLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSKGISPDVVTYSALISGF 241
Query: 177 VEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQ 236
K +A +F ++ EE + PD F +++ + K G ++A+ + A+M ++G++
Sbjct: 242 CILGKLNDAIGLFNKMISEE---INPDVYTFSILVDGFCKEGRVKEAKNVLAMMMKQGIK 298
Query: 237 QSTVTYNSLMSFETNYKEVSK---IYDQMQRAGLQPDVVSYALLINAYGKARREEEALAV 293
VTY SLM K+V+K I++ M + G+ +V SY ++IN + K ++ +EA+ +
Sbjct: 299 PDVVTYCSLMDGYCLVKQVNKAKSIFNTMAQGGVTANVQSYNIMINGFCKIKKVDEAMNL 358
Query: 294 FEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSP-DICSYTTMLSAYV 352
F+EM + P YN L+D SG + A + M DR P D +Y ++L A
Sbjct: 359 FKEMHCKNIIPDVVTYNSLIDGLCKSGKISYALKLVDEM-HDRGVPHDKITYNSILDALC 417
Query: 353 NASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQT 412
++ A ++K +G P++ TY LI G K L+ I++ + V G
Sbjct: 418 KNHQVDKAIALLTKMKDEGIQPDMYTYTILIDGLCKGGRLKDAQNIFEDLLVKGYNITVY 477
Query: 413 IFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELL 469
+T ++ + N FD A+ +ME G P+ K I++ DE + A +LL
Sbjct: 478 TYTVMIQGFCDNDLFDKALALLSKMEDNGCIPNAKTYEIIILSLFEKDENDMAEKLL 534
Score = 139 bits (349), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 87/394 (22%), Positives = 191/394 (48%), Gaps = 10/394 (2%)
Query: 63 VLGTLVRLKQLKKWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFM 122
+LG+LV++ + + +E+ I S + + F +LI + + G + + V + +
Sbjct: 62 ILGSLVKINCYQTAISLHREMEFNGIAS----DLVTFNILINCFSQLGHTHFSFSVFANI 117
Query: 123 NKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKF 182
KKGY P+ ++ T L++ G+ A ++ + G + + Y ++ + +
Sbjct: 118 LKKGYEPNAITLTTLIKGLCLKGQIHQALHFHDKVVALGFHLNKVCYGTLINGLCKVGQT 177
Query: 183 KEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTY 242
A ++ L + ++P+ M++ +I K +A L++ M +G+ VTY
Sbjct: 178 SAALQL---LRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSKGISPDVVTY 234
Query: 243 NSLMS---FETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLD 299
++L+S + ++++M + PDV ++++L++ + K R +EA V M+
Sbjct: 235 SALISGFCILGKLNDAIGLFNKMISEEINPDVYTFSILVDGFCKEGRVKEAKNVLAMMMK 294
Query: 300 AGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEG 359
G++P Y L+D + + V++A+++F M + + ++ SY M++ + ++
Sbjct: 295 QGIKPDVVTYCSLMDGYCLVKQVNKAKSIFNTMAQGGVTANVQSYNIMINGFCKIKKVDE 354
Query: 360 AEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMD 419
A F+ + +P+V+TY +LI G K + +++ D+M G+ ++ + +I+D
Sbjct: 355 AMNLFKEMHCKNIIPDVVTYNSLIDGLCKSGKISYALKLVDEMHDRGVPHDKITYNSILD 414
Query: 420 AYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILL 453
A KN D A+ +M+ G PD IL+
Sbjct: 415 ALCKNHQVDKAIALLTKMKDEGIQPDMYTYTILI 448
Score = 134 bits (338), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 91/333 (27%), Positives = 163/333 (48%), Gaps = 6/333 (1%)
Query: 113 NKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQII 172
N+A + S M KG +P VV+++AL+ + G+ +A +F +M S P T+ I+
Sbjct: 213 NEAFDLYSEMVSKGISPDVVTYSALISGFCILGKLNDAIGLFNKMISEEINPDVYTFSIL 272
Query: 173 LKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAE 232
+ F + + KEA+ V ++ K +KPD + ++ Y KA+ +F MA+
Sbjct: 273 VDGFCKEGRVKEAKNVLAMMM---KQGIKPDVVTYCSLMDGYCLVKQVNKAKSIFNTMAQ 329
Query: 233 RGVQQSTVTYNSLMSFETNYKEVSK---IYDQMQRAGLQPDVVSYALLINAYGKARREEE 289
GV + +YN +++ K+V + ++ +M + PDVV+Y LI+ K+ +
Sbjct: 330 GGVTANVQSYNIMINGFCKIKKVDEAMNLFKEMHCKNIIPDVVTYNSLIDGLCKSGKISY 389
Query: 290 ALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLS 349
AL + +EM D GV YN +LDA + VD+A + M+ + PD+ +YT ++
Sbjct: 390 ALKLVDEMHDRGVPHDKITYNSILDALCKNHQVDKAIALLTKMKDEGIQPDMYTYTILID 449
Query: 350 AYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKP 409
++ A+ F L G+ V TY +I+G+ + +K + + KM NG P
Sbjct: 450 GLCKGGRLKDAQNIFEDLLVKGYNITVYTYTVMIQGFCDNDLFDKALALLSKMEDNGCIP 509
Query: 410 NQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGF 442
N + I+ + + + D A +EM + G
Sbjct: 510 NAKTYEIIILSLFEKDENDMAEKLLREMIARGL 542
Score = 128 bits (322), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 83/372 (22%), Positives = 168/372 (45%), Gaps = 8/372 (2%)
Query: 122 MNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANK 181
M G A +V+ L+ + + G + ++F + G P+A+T ++K +
Sbjct: 82 MEFNGIASDLVTFNILINCFSQLGHTHFSFSVFANILKKGYEPNAITLTTLIKGLCLKGQ 141
Query: 182 FKEAEEVFMTLLDEEKS-PLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTV 240
+A + D+ + ++ + +I K G A +L + + VQ + V
Sbjct: 142 IHQA----LHFHDKVVALGFHLNKVCYGTLINGLCKVGQTSAALQLLRRVDGKLVQPNVV 197
Query: 241 TYNSLMSFETNYKEVSK---IYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEM 297
YN+++ K V++ +Y +M G+ PDVV+Y+ LI+ + + +A+ +F +M
Sbjct: 198 MYNTIIDSMCKVKLVNEAFDLYSEMVSKGISPDVVTYSALISGFCILGKLNDAIGLFNKM 257
Query: 298 LDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDM 357
+ + P ++IL+D F G V +A+ V M + PD+ +Y +++ Y +
Sbjct: 258 ISEEINPDVYTFSILVDGFCKEGRVKEAKNVLAMMMKQGIKPDVVTYCSLMDGYCLVKQV 317
Query: 358 EGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTI 417
A+ F + Q G NV +Y +I G+ K+ +++ M ++ +M I P+ + ++
Sbjct: 318 NKAKSIFNTMAQGGVTANVQSYNIMINGFCKIKKVDEAMNLFKEMHCKNIIPDVVTYNSL 377
Query: 418 MDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNN 477
+D K+ A+ EM G P D+ N +L + ++A LL
Sbjct: 378 IDGLCKSGKISYALKLVDEMHDRGVPHDKITYNSILDALCKNHQVDKAIALLTKMKDEGI 437
Query: 478 EPGINGLSISVD 489
+P + +I +D
Sbjct: 438 QPDMYTYTILID 449
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 75/278 (26%), Positives = 137/278 (49%), Gaps = 6/278 (2%)
Query: 99 FLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQ 158
F +L+ + K+G +A+ VL+ M K+G P VV++ +LM+ Y + A++IF M
Sbjct: 269 FSILVDGFCKEGRVKEAKNVLAMMMKQGIKPDVVTYCSLMDGYCLVKQVNKAKSIFNTMA 328
Query: 159 SSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAG 218
G + +Y I++ F + K EA +F + + PD ++ +I K+G
Sbjct: 329 QGGVTANVQSYNIMINGFCKIKKVDEAMNLFKEM---HCKNIIPDVVTYNSLIDGLCKSG 385
Query: 219 GYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSK---IYDQMQRAGLQPDVVSYA 275
A KL M +RGV +TYNS++ +V K + +M+ G+QPD+ +Y
Sbjct: 386 KISYALKLVDEMHDRGVPHDKITYNSILDALCKNHQVDKAIALLTKMKDEGIQPDMYTYT 445
Query: 276 LLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRD 335
+LI+ K R ++A +FE++L G T Y +++ F + + D+A + M +
Sbjct: 446 ILIDGLCKGGRLKDAQNIFEDLLVKGYNITVYTYTVMIQGFCDNDLFDKALALLSKMEDN 505
Query: 336 RCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFV 373
C P+ +Y ++ + + + AEK R + G +
Sbjct: 506 GCIPNAKTYEIIILSLFEKDENDMAEKLLREMIARGLL 543
Score = 108 bits (269), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 79/362 (21%), Positives = 172/362 (47%), Gaps = 10/362 (2%)
Query: 28 KKNWRRLMNQIEEVGSAVAVLRS-ERTRGQPLPKDLVLGTLVRLKQLKKWNVVSEVLEWL 86
K + L+N + +VG A L+ R G+ + ++V+ + + + K +V+E +
Sbjct: 161 KVCYGTLINGLCKVGQTSAALQLLRRVDGKLVQPNVVMYNTI-IDSMCKVKLVNEAFDLY 219
Query: 87 R--IQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRG 144
+ + + + LI+ + G N A + + M + P V + + L++ + +
Sbjct: 220 SEMVSKGISPDVVTYSALISGFCILGKLNDAIGLFNKMISEEINPDVYTFSILVDGFCKE 279
Query: 145 GRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQ 204
GR K A+ + M G +P +TY ++ + + +A+ +F T+ + + +
Sbjct: 280 GRVKEAKNVLAMMMKQGIKPDVVTYCSLMDGYCLVKQVNKAKSIFNTM---AQGGVTANV 336
Query: 205 KMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVS---KIYDQ 261
+ +++MI + K ++A LF M + + VTYNSL+ ++S K+ D+
Sbjct: 337 QSYNIMINGFCKIKKVDEAMNLFKEMHCKNIIPDVVTYNSLIDGLCKSGKISYALKLVDE 396
Query: 262 MQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGM 321
M G+ D ++Y +++A K + ++A+A+ +M D G++P Y IL+D G
Sbjct: 397 MHDRGVPHDKITYNSILDALCKNHQVDKAIALLTKMKDEGIQPDMYTYTILIDGLCKGGR 456
Query: 322 VDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGT 381
+ A+ +F+ + + + +YT M+ + + + A +++ +G +PN TY
Sbjct: 457 LKDAQNIFEDLLVKGYNITVYTYTVMIQGFCDNDLFDKALALLSKMEDNGCIPNAKTYEI 516
Query: 382 LI 383
+I
Sbjct: 517 II 518
Score = 78.6 bits (192), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 102/224 (45%), Gaps = 6/224 (2%)
Query: 269 PDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTV 328
P + + ++ + K + A+++ EM G+ +NIL++ F+ G + +V
Sbjct: 54 PPIFEFGKILGSLVKINCYQTAISLHREMEFNGIASDLVTFNILINCFSQLGHTHFSFSV 113
Query: 329 FKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAK 388
F + + P+ + TT++ + A F ++ GF N + YGTLI G K
Sbjct: 114 FANILKKGYEPNAITLTTLIKGLCLKGQIHQALHFHDKVVALGFHLNKVCYGTLINGLCK 173
Query: 389 VNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKA 448
V +++ ++ ++PN ++ TI+D+ K K + A Y EM S G PD
Sbjct: 174 VGQTSAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSKGISPDVVT 233
Query: 449 KNILLSLAKTADERNEANELLGNFNHPNNE---PGINGLSISVD 489
+ L+S + N+A +G FN +E P + SI VD
Sbjct: 234 YSALISGFCILGKLNDA---IGLFNKMISEEINPDVYTFSILVD 274
>gi|297733858|emb|CBI15105.3| unnamed protein product [Vitis vinifera]
Length = 627
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 107/409 (26%), Positives = 201/409 (49%), Gaps = 13/409 (3%)
Query: 66 TLVRLKQLKKWNVVSEVLEWLRIQSWWDFNEM-DFLMLITAYGKQGDFNKAEKVLSFMNK 124
T +L +L+K VSE+L+ ++S F ++ + +L+ A+ + G +A V M
Sbjct: 54 TFGKLNRLEK---VSELLK--EMESGGSFPDITSYNVLLEAHAQSGSIKEAMGVFRQMQG 108
Query: 125 KGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKE 184
G P+ +++ L+ YGR GRY + +F M+ S P+A TY I++ +F E FKE
Sbjct: 109 AGCVPNAATYSILLNLYGRHGRYDDVRDLFLEMKVSNTEPNAATYNILINVFGEGGYFKE 168
Query: 185 AEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNS 244
+F +++E ++P+ + + +I+ K G +E A+K+ M E+GV S+ Y
Sbjct: 169 VVTLFHDMVEEN---VEPNMETYEGLIFACGKGGLHEDAKKILLHMNEKGVVPSSKAYTG 225
Query: 245 LMSFETN---YKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAG 301
++ Y+E ++ M G +P V +Y LI + K +E+ A+ +M +G
Sbjct: 226 VIEAYGQAALYEEALVAFNTMNEVGSKPTVETYNSLIQMFAKGGLYKESEAILLKMGQSG 285
Query: 302 VRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAE 361
V +N +++AF G ++A + M + RC PD + +LS Y A +E +E
Sbjct: 286 VARNRDTFNGVIEAFRQGGQFEEAIKAYVEMEKARCDPDEQTLEAVLSVYCFAGLVEESE 345
Query: 362 KFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKP-NQTIFTTIMDA 420
+ F +K G +P+V+ Y ++ YAK + + ++ D+M N + +Q I I
Sbjct: 346 EQFGEIKALGILPSVMCYCMMLAVYAKADRWDDAHQLLDEMFTNRVSNIHQVIGQMIRGD 405
Query: 421 YGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELL 469
Y + ++ +++++S G + N LL ++ A +L
Sbjct: 406 YDDDSNWQMVEYVFEKLKSEGCSLGVRFYNTLLEALWWLGQKERATRVL 454
Score = 142 bits (359), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 92/399 (23%), Positives = 191/399 (47%), Gaps = 8/399 (2%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
L++A ++G ++AE V MN+ G P + +++ L+E +G+ R + + + M+S G
Sbjct: 16 LLSACARRGLGDEAEMVFRTMNEGGILPDITTYSYLVETFGKLNRLEKVSELLKEMESGG 75
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
P +Y ++L+ ++ KEA VF + + + P+ + +++ +Y + G Y+
Sbjct: 76 SFPDITSYNVLLEAHAQSGSIKEAMGVFRQM---QGAGCVPNAATYSILLNLYGRHGRYD 132
Query: 222 KARKLFALMAERGVQQSTVTYNSLMSF--ETNY-KEVSKIYDQMQRAGLQPDVVSYALLI 278
R LF M + + TYN L++ E Y KEV ++ M ++P++ +Y LI
Sbjct: 133 DVRDLFLEMKVSNTEPNAATYNILINVFGEGGYFKEVVTLFHDMVEENVEPNMETYEGLI 192
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCS 338
A GK E+A + M + GV P+ KAY +++A+ + + ++A F M
Sbjct: 193 FACGKGGLHEDAKKILLHMNEKGVVPSSKAYTGVIEAYGQAALYEEALVAFNTMNEVGSK 252
Query: 339 PDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEI 398
P + +Y +++ + + +E ++ Q G N T+ +I+ + + E+ ++
Sbjct: 253 PTVETYNSLIQMFAKGGLYKESEAILLKMGQSGVARNRDTFNGVIEAFRQGGQFEEAIKA 312
Query: 399 YDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKT 458
Y +M P++ ++ Y + + + E+++ G P ++L++
Sbjct: 313 YVEMEKARCDPDEQTLEAVLSVYCFAGLVEESEEQFGEIKALGILPSVMCYCMMLAVYAK 372
Query: 459 ADERNEANELLGNF--NHPNNEPGINGLSISVDEEDDDD 495
AD ++A++LL N +N + G I D +DD +
Sbjct: 373 ADRWDDAHQLLDEMFTNRVSNIHQVIGQMIRGDYDDDSN 411
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 90/352 (25%), Positives = 170/352 (48%), Gaps = 6/352 (1%)
Query: 122 MNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANK 181
M +G +V++ L+ A R G AE +FR M G P TY +++ F + N+
Sbjct: 1 MRHEGIQADIVTYNTLLSACARRGLGDEAEMVFRTMNEGGILPDITTYSYLVETFGKLNR 60
Query: 182 FKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVT 241
++ E+ L + E PD +++++ + ++G ++A +F M G + T
Sbjct: 61 LEKVSEL---LKEMESGGSFPDITSYNVLLEAHAQSGSIKEAMGVFRQMQGAGCVPNAAT 117
Query: 242 YNSLMSF---ETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEML 298
Y+ L++ Y +V ++ +M+ + +P+ +Y +LIN +G+ +E + +F +M+
Sbjct: 118 YSILLNLYGRHGRYDDVRDLFLEMKVSNTEPNAATYNILINVFGEGGYFKEVVTLFHDMV 177
Query: 299 DAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDME 358
+ V P + Y L+ A G+ + A+ + M P +YT ++ AY A+ E
Sbjct: 178 EENVEPNMETYEGLIFACGKGGLHEDAKKILLHMNEKGVVPSSKAYTGVIEAYGQAALYE 237
Query: 359 GAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIM 418
A F + + G P V TY +LI+ +AK ++ I KM +G+ N+ F ++
Sbjct: 238 EALVAFNTMNEVGSKPTVETYNSLIQMFAKGGLYKESEAILLKMGQSGVARNRDTFNGVI 297
Query: 419 DAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLG 470
+A+ + F+ A+ Y EME PD++ +LS+ A E+ E G
Sbjct: 298 EAFRQGGQFEEAIKAYVEMEKARCDPDEQTLEAVLSVYCFAGLVEESEEQFG 349
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 72/286 (25%), Positives = 136/286 (47%), Gaps = 7/286 (2%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
LI A GK G A+K+L MN+KG PS ++T ++EAYG+ Y+ A F M G
Sbjct: 191 LIFACGKGGLHEDAKKILLHMNEKGVVPSSKAYTGVIEAYGQAALYEEALVAFNTMNEVG 250
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
+P+ TY ++++F + +KE+E + LL +S + ++ F+ +I +++ G +E
Sbjct: 251 SKPTVETYNSLIQMFAKGGLYKESEAI---LLKMGQSGVARNRDTFNGVIEAFRQGGQFE 307
Query: 222 KARKLFALMAERGVQQSTVTYNSLMS---FETNYKEVSKIYDQMQRAGLQPDVVSYALLI 278
+A K + M + T +++S F +E + + +++ G+ P V+ Y +++
Sbjct: 308 EAIKAYVEMEKARCDPDEQTLEAVLSVYCFAGLVEESEEQFGEIKALGILPSVMCYCMML 367
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDA-FAISGMVDQARTVFKCMRRDRC 337
Y KA R ++A + +EM V H+ ++ + VF+ ++ + C
Sbjct: 368 AVYAKADRWDDAHQLLDEMFTNRVSNIHQVIGQMIRGDYDDDSNWQMVEYVFEKLKSEGC 427
Query: 338 SPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLI 383
S + Y T+L A E A + + G P + L+
Sbjct: 428 SLGVRFYNTLLEALWWLGQKERATRVLNEATKRGLFPELFRKNKLV 473
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 80/158 (50%)
Query: 332 MRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNN 391
MR + DI +Y T+LSA + AE FR + + G +P++ TY L++ + K+N
Sbjct: 1 MRHEGIQADIVTYNTLLSACARRGLGDEAEMVFRTMNEGGILPDITTYSYLVETFGKLNR 60
Query: 392 LEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNI 451
LEK+ E+ +M G P+ T + +++A+ ++ A+ +++M+ G P+ +I
Sbjct: 61 LEKVSELLKEMESGGSFPDITSYNVLLEAHAQSGSIKEAMGVFRQMQGAGCVPNAATYSI 120
Query: 452 LLSLAKTADERNEANELLGNFNHPNNEPGINGLSISVD 489
LL+L ++ +L N EP +I ++
Sbjct: 121 LLNLYGRHGRYDDVRDLFLEMKVSNTEPNAATYNILIN 158
>gi|449463537|ref|XP_004149490.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g02150-like [Cucumis sativus]
Length = 786
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 100/343 (29%), Positives = 173/343 (50%), Gaps = 6/343 (1%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
L+ K G+ K + M G APSV ++ +++ + G +N+ +F +M+ G
Sbjct: 260 LLHRLSKSGNGQLVRKFFNDMIGAGIAPSVFTYNVMIDYLCKEGDLENSRRLFVQMREMG 319
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
P +TY ++ + + +E +F + D PD ++ +I Y K
Sbjct: 320 LSPDVVTYNSLIDGYGKVGSLEEVASLFNEMKD---VGCVPDIITYNGLINCYCKFEKMP 376
Query: 222 KARKLFALMAERGVQQSTVTYNSLM-SF--ETNYKEVSKIYDQMQRAGLQPDVVSYALLI 278
+A + F+ M G++ + VTY++L+ +F E + K++ M+R GL P+ +Y LI
Sbjct: 377 RAFEYFSEMKNNGLKPNVVTYSTLIDAFCKEGMMQGAIKLFVDMRRTGLLPNEFTYTSLI 436
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCS 338
+A KA EA + +ML AGV+ Y LLD +G + +A VF+ M +D S
Sbjct: 437 DANCKAGNLTEAWKLLNDMLQAGVKLNIVTYTALLDGLCKAGRMIEAEEVFRSMLKDGIS 496
Query: 339 PDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEI 398
P+ YT ++ Y+ A ME A K +++ + P++I YG++I G+ LE+ I
Sbjct: 497 PNQQVYTALVHGYIKAERMEDAMKILKQMTECNIKPDLILYGSIIWGHCSQRKLEETKLI 556
Query: 399 YDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCG 441
++M+ GI N I TTI+DAY K A+ +++EM+ G
Sbjct: 557 LEEMKSRGISANPVISTTIIDAYFKAGKSSDALNFFQEMQDVG 599
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 98/377 (25%), Positives = 186/377 (49%), Gaps = 6/377 (1%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + + LI A+ K+G A K+ M + G P+ ++T+L++A + G A +
Sbjct: 393 NVVTYSTLIDAFCKEGMMQGAIKLFVDMRRTGLLPNEFTYTSLIDANCKAGNLTEAWKLL 452
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
M +G + + +TY +L +A + EAEEVF ++L K + P+Q+++ +++ Y
Sbjct: 453 NDMLQAGVKLNIVTYTALLDGLCKAGRMIEAEEVFRSML---KDGISPNQQVYTALVHGY 509
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSLM---SFETNYKEVSKIYDQMQRAGLQPDV 271
KA E A K+ M E ++ + Y S++ + +E I ++M+ G+ +
Sbjct: 510 IKAERMEDAMKILKQMTECNIKPDLILYGSIIWGHCSQRKLEETKLILEEMKSRGISANP 569
Query: 272 VSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKC 331
V +I+AY KA + +AL F+EM D GV T Y +L+D +G+V+ A F
Sbjct: 570 VISTTIIDAYFKAGKSSDALNFFQEMQDVGVEATIVTYCVLIDGLCKAGIVELAVDYFCR 629
Query: 332 MRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNN 391
M P++ YT+++ + +E A+K F ++ G P++ + LI G K N
Sbjct: 630 MLSLGLQPNVAVYTSLIDGLCKNNCIESAKKLFDEMQCRGMTPDITAFTALIDGNLKHGN 689
Query: 392 LEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNI 451
L++ + + +M I+ + ++T+++ + + + A ++ EM G P++
Sbjct: 690 LQEALVLISRMTELAIEFDLHVYTSLVSGFSQCGELHQARKFFNEMIEKGILPEEVLCIC 749
Query: 452 LLSLAKTADERNEANEL 468
LL + +EA EL
Sbjct: 750 LLREYYKRGQLDEAIEL 766
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 100/391 (25%), Positives = 176/391 (45%), Gaps = 41/391 (10%)
Query: 101 MLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSS 160
++I K+GD + ++ M + G +P VV++ +L++ YG+ G + ++F M+
Sbjct: 294 VMIDYLCKEGDLENSRRLFVQMREMGLSPDVVTYNSLIDGYGKVGSLEEVASLFNEMKDV 353
Query: 161 GPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGY 220
G P +TY ++ + + K A E F + + + LKP+ + +I + K G
Sbjct: 354 GCVPDIITYNGLINCYCKFEKMPRAFEYFSEM---KNNGLKPNVVTYSTLIDAFCKEGMM 410
Query: 221 EKARKLFALMAERGVQQSTVTYNSLMSFET---NYKEVSKIYDQMQRAGLQPDVVSYALL 277
+ A KLF M G+ + TY SL+ N E K+ + M +AG++ ++V+Y L
Sbjct: 411 QGAIKLFVDMRRTGLLPNEFTYTSLIDANCKAGNLTEAWKLLNDMLQAGVKLNIVTYTAL 470
Query: 278 INAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRC 337
++ KA R EA VF ML G+ P + Y L+ + + ++ A + K M
Sbjct: 471 LDGLCKAGRMIEAEEVFRSMLKDGISPNQQVYTALVHGYIKAERMEDAMKILKQMTECNI 530
Query: 338 SPDICSY-----------------------------------TTMLSAYVNASDMEGAEK 362
PD+ Y TT++ AY A A
Sbjct: 531 KPDLILYGSIIWGHCSQRKLEETKLILEEMKSRGISANPVISTTIIDAYFKAGKSSDALN 590
Query: 363 FFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYG 422
FF+ ++ G ++TY LI G K +E ++ + +M G++PN ++T+++D
Sbjct: 591 FFQEMQDVGVEATIVTYCVLIDGLCKAGIVELAVDYFCRMLSLGLQPNVAVYTSLIDGLC 650
Query: 423 KNKDFDSAVVWYKEMESCGFPPDQKAKNILL 453
KN +SA + EM+ G PD A L+
Sbjct: 651 KNNCIESAKKLFDEMQCRGMTPDITAFTALI 681
Score = 146 bits (368), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 89/313 (28%), Positives = 153/313 (48%), Gaps = 6/313 (1%)
Query: 136 ALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDE 195
L + G + A F RM++ P A + +L ++ + + F ++
Sbjct: 224 VLFSVFVELGLLEEANECFSRMRNFRTLPKARSCNFLLHRLSKSGNGQLVRKFFNDMIG- 282
Query: 196 EKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLM---SFETNY 252
+ + P +++MI K G E +R+LF M E G+ VTYNSL+ +
Sbjct: 283 --AGIAPSVFTYNVMIDYLCKEGDLENSRRLFVQMREMGLSPDVVTYNSLIDGYGKVGSL 340
Query: 253 KEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNIL 312
+EV+ ++++M+ G PD+++Y LIN Y K + A F EM + G++P Y+ L
Sbjct: 341 EEVASLFNEMKDVGCVPDIITYNGLINCYCKFEKMPRAFEYFSEMKNNGLKPNVVTYSTL 400
Query: 313 LDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGF 372
+DAF GM+ A +F MRR P+ +YT+++ A A ++ A K + Q G
Sbjct: 401 IDAFCKEGMMQGAIKLFVDMRRTGLLPNEFTYTSLIDANCKAGNLTEAWKLLNDMLQAGV 460
Query: 373 VPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVV 432
N++TY L+ G K + + E++ M +GI PNQ ++T ++ Y K + + A+
Sbjct: 461 KLNIVTYTALLDGLCKAGRMIEAEEVFRSMLKDGISPNQQVYTALVHGYIKAERMEDAMK 520
Query: 433 WYKEMESCGFPPD 445
K+M C PD
Sbjct: 521 ILKQMTECNIKPD 533
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 85/315 (26%), Positives = 151/315 (47%), Gaps = 6/315 (1%)
Query: 168 TYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLF 227
+ ++ +FVE +EA E F + + P + + +++ K+G + RK F
Sbjct: 221 VFDVLFSVFVELGLLEEANECFSRMRNFRT---LPKARSCNFLLHRLSKSGNGQLVRKFF 277
Query: 228 ALMAERGVQQSTVTYNSLMSF---ETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKA 284
M G+ S TYN ++ + E + + +++ QM+ GL PDVV+Y LI+ YGK
Sbjct: 278 NDMIGAGIAPSVFTYNVMIDYLCKEGDLENSRRLFVQMREMGLSPDVVTYNSLIDGYGKV 337
Query: 285 RREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSY 344
EE ++F EM D G P YN L++ + + +A F M+ + P++ +Y
Sbjct: 338 GSLEEVASLFNEMKDVGCVPDIITYNGLINCYCKFEKMPRAFEYFSEMKNNGLKPNVVTY 397
Query: 345 TTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRV 404
+T++ A+ M+GA K F +++ G +PN TY +LI K NL + ++ + M
Sbjct: 398 STLIDAFCKEGMMQGAIKLFVDMRRTGLLPNEFTYTSLIDANCKAGNLTEAWKLLNDMLQ 457
Query: 405 NGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNE 464
G+K N +T ++D K A ++ M G P+Q+ L+ A+ +
Sbjct: 458 AGVKLNIVTYTALLDGLCKAGRMIEAEEVFRSMLKDGISPNQQVYTALVHGYIKAERMED 517
Query: 465 ANELLGNFNHPNNEP 479
A ++L N +P
Sbjct: 518 AMKILKQMTECNIKP 532
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 83/351 (23%), Positives = 171/351 (48%), Gaps = 6/351 (1%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
NE + LI A K G+ +A K+L+ M + G ++V++TAL++ + GR AE +F
Sbjct: 428 NEFTYTSLIDANCKAGNLTEAWKLLNDMLQAGVKLNIVTYTALLDGLCKAGRMIEAEEVF 487
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
R M G P+ Y ++ +++A + ++A ++ L + +KPD ++ +I+ +
Sbjct: 488 RSMLKDGISPNQQVYTALVHGYIKAERMEDAMKI---LKQMTECNIKPDLILYGSIIWGH 544
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSLMS--FETN-YKEVSKIYDQMQRAGLQPDV 271
E+ + + M RG+ + V +++ F+ + + +MQ G++ +
Sbjct: 545 CSQRKLEETKLILEEMKSRGISANPVISTTIIDAYFKAGKSSDALNFFQEMQDVGVEATI 604
Query: 272 VSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKC 331
V+Y +LI+ KA E A+ F ML G++P Y L+D + ++ A+ +F
Sbjct: 605 VTYCVLIDGLCKAGIVELAVDYFCRMLSLGLQPNVAVYTSLIDGLCKNNCIESAKKLFDE 664
Query: 332 MRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNN 391
M+ +PDI ++T ++ + +++ A R+ + ++ Y +L+ G+++
Sbjct: 665 MQCRGMTPDITAFTALIDGNLKHGNLQEALVLISRMTELAIEFDLHVYTSLVSGFSQCGE 724
Query: 392 LEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGF 442
L + + +++M GI P + + ++ Y K D A+ EME G
Sbjct: 725 LHQARKFFNEMIEKGILPEEVLCICLLREYYKRGQLDEAIELKNEMERMGL 775
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 78/367 (21%), Positives = 143/367 (38%), Gaps = 75/367 (20%)
Query: 76 WNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHT 135
W +++++L Q+ N + + L+ K G +AE+V M K G +P+ +T
Sbjct: 449 WKLLNDML-----QAGVKLNIVTYTALLDGLCKAGRMIEAEEVFRSMLKDGISPNQQVYT 503
Query: 136 ALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVF------ 189
AL+ Y + R ++A I ++M +P + Y I+ K +E + +
Sbjct: 504 ALVHGYIKAERMEDAMKILKQMTECNIKPDLILYGSIIWGHCSQRKLEETKLILEEMKSR 563
Query: 190 ---------MTLLD------EEKSPLKPDQKM-----------FHMMIYMYKKAGGYEKA 223
T++D + L Q+M + ++I KAG E A
Sbjct: 564 GISANPVISTTIIDAYFKAGKSSDALNFFQEMQDVGVEATIVTYCVLIDGLCKAGIVELA 623
Query: 224 RKLFALMAERGVQQSTVTYNSL---MSFETNYKEVSKIYDQMQRAGLQPDVVSYALLINA 280
F M G+Q + Y SL + + K++D+MQ G+ PD+ ++ LI+
Sbjct: 624 VDYFCRMLSLGLQPNVAVYTSLIDGLCKNNCIESAKKLFDEMQCRGMTPDITAFTALIDG 683
Query: 281 YGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPD 340
K +EAL + M + + Y L+ F+ G + QAR
Sbjct: 684 NLKHGNLQEALVLISRMTELAIEFDLHVYTSLVSGFSQCGELHQAR-------------- 729
Query: 341 ICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYD 400
KFF + + G +P + L++ Y K L++ +E+ +
Sbjct: 730 ---------------------KFFNEMIEKGILPEEVLCICLLREYYKRGQLDEAIELKN 768
Query: 401 KMRVNGI 407
+M G+
Sbjct: 769 EMERMGL 775
Score = 68.6 bits (166), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 43/182 (23%), Positives = 78/182 (42%)
Query: 308 AYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRL 367
+++L F G++++A F MR R P S +L + + + KFF +
Sbjct: 221 VFDVLFSVFVELGLLEEANECFSRMRNFRTLPKARSCNFLLHRLSKSGNGQLVRKFFNDM 280
Query: 368 KQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDF 427
G P+V TY +I K +LE ++ +MR G+ P+ + +++D YGK
Sbjct: 281 IGAGIAPSVFTYNVMIDYLCKEGDLENSRRLFVQMREMGLSPDVVTYNSLIDGYGKVGSL 340
Query: 428 DSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGINGLSIS 487
+ + EM+ G PD N L++ ++ A E + +P + S
Sbjct: 341 EEVASLFNEMKDVGCVPDIITYNGLINCYCKFEKMPRAFEYFSEMKNNGLKPNVVTYSTL 400
Query: 488 VD 489
+D
Sbjct: 401 ID 402
>gi|449455685|ref|XP_004145582.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
chloroplastic-like [Cucumis sativus]
Length = 1113
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 117/464 (25%), Positives = 210/464 (45%), Gaps = 31/464 (6%)
Query: 3 MLAPRKFMQK---RRKVE----VFKDAADEAGKKNWRRLMNQIEEVGSAVAVLRSERTRG 55
M A +FMQK RR ++ +FK + G + ++N++ + G VL + G
Sbjct: 141 MAAVFEFMQKKIIRRDLDTYLTIFKALSIRGGLRQMTTVLNKMRKAG---FVLNAYSYNG 197
Query: 56 QPLPKDLVLGTLVRLKQLKKWNVVSEVLEWLR--IQSWWDFNEMDFLMLITAYGKQGDFN 113
L+ L L + E LE R + + + L+ A GK+ D
Sbjct: 198 -----------LIHL--LIQSGFCGEALEVYRRMVSEGLKPSLKTYSALMVALGKKRDSE 244
Query: 114 KAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIIL 173
+L M G P+V + T + GR G+ A IFRRM G P +TY +++
Sbjct: 245 MVMVLLKEMEDLGLRPNVYTFTICIRVLGRAGKIDEAYEIFRRMDDEGCGPDLVTYTVLI 304
Query: 174 KLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAER 233
A + + A+E+F+ + + + KPDQ ++ ++ + G + ++ ++ M
Sbjct: 305 DALCNAGQLENAKELFVKM---KANGHKPDQVIYITLLDKFNDFGDLDTFKEFWSQMEAD 361
Query: 234 GVQQSTVTYNSLMSFET---NYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEA 290
G VT+ L+ ++ E +D M++ G+ P++ +Y LI +A R E+A
Sbjct: 362 GYMPDVVTFTILVDVLCKARDFDEAFATFDVMRKQGILPNLHTYNTLICGLLRAGRIEDA 421
Query: 291 LAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSA 350
L + M GV+PT YNI +D F SG +A F+ M+ P+I + L +
Sbjct: 422 LKLLGTMESVGVQPTAYTYNIFIDYFGKSGETGKAVETFEKMKAKGIVPNIVACNASLYS 481
Query: 351 YVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPN 410
+ A+ F L+++G P+ +TY ++K Y+KV +++ + + +M NG +P+
Sbjct: 482 LAEMGRLREAKTMFNGLRENGLAPDSVTYNMMMKCYSKVGQVDEAVNLLSEMIRNGCEPD 541
Query: 411 QTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLS 454
+ +++D+ K D A + M+ P N LLS
Sbjct: 542 VIVVNSLIDSLYKAGRVDEAWQMFDRMKDMKLSPTVVTYNTLLS 585
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 96/394 (24%), Positives = 184/394 (46%), Gaps = 35/394 (8%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N F + I G+ G ++A ++ M+ +G P +V++T L++A G+ +NA+ +F
Sbjct: 261 NVYTFTICIRVLGRAGKIDEAYEIFRRMDDEGCGPDLVTYTVLIDALCNAGQLENAKELF 320
Query: 155 RRMQSSGPRPSALTYQIILKLF---------------VEAN-----------------KF 182
+M+++G +P + Y +L F +EA+ K
Sbjct: 321 VKMKANGHKPDQVIYITLLDKFNDFGDLDTFKEFWSQMEADGYMPDVVTFTILVDVLCKA 380
Query: 183 KEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTY 242
++ +E F T K + P+ ++ +I +AG E A KL M GVQ + TY
Sbjct: 381 RDFDEAFATFDVMRKQGILPNLHTYNTLICGLLRAGRIEDALKLLGTMESVGVQPTAYTY 440
Query: 243 NSLMSFETNYKEVSK---IYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLD 299
N + + E K +++M+ G+ P++V+ + + + R EA +F + +
Sbjct: 441 NIFIDYFGKSGETGKAVETFEKMKAKGIVPNIVACNASLYSLAEMGRLREAKTMFNGLRE 500
Query: 300 AGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEG 359
G+ P YN+++ ++ G VD+A + M R+ C PD+ +++ + A ++
Sbjct: 501 NGLAPDSVTYNMMMKCYSKVGQVDEAVNLLSEMIRNGCEPDVIVVNSLIDSLYKAGRVDE 560
Query: 360 AEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMD 419
A + F R+K P V+TY TL+ G K ++K +E+++ M PN F T++D
Sbjct: 561 AWQMFDRMKDMKLSPTVVTYNTLLSGLGKEGRVQKAIELFESMIEKKCSPNTISFNTLLD 620
Query: 420 AYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILL 453
+ KN + + A+ + +M PD N ++
Sbjct: 621 CFCKNDEVELALKMFSKMTVMDCKPDVLTYNTVI 654
Score = 144 bits (364), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 101/390 (25%), Positives = 180/390 (46%), Gaps = 7/390 (1%)
Query: 79 VSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALM 138
++ VL +R ++ + N + LI + G +A +V M +G PS+ +++ALM
Sbjct: 176 MTTVLNKMR-KAGFVLNAYSYNGLIHLLIQSGFCGEALEVYRRMVSEGLKPSLKTYSALM 234
Query: 139 EAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKS 198
A G+ + + + M+ G RP+ T+ I +++ A K EA E+F + DE
Sbjct: 235 VALGKKRDSEMVMVLLKEMEDLGLRPNVYTFTICIRVLGRAGKIDEAYEIFRRMDDE--- 291
Query: 199 PLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEV--- 255
PD + ++I AG E A++LF M G + V Y +L+ ++ ++
Sbjct: 292 GCGPDLVTYTVLIDALCNAGQLENAKELFVKMKANGHKPDQVIYITLLDKFNDFGDLDTF 351
Query: 256 SKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDA 315
+ + QM+ G PDVV++ +L++ KAR +EA A F+ M G+ P YN L+
Sbjct: 352 KEFWSQMEADGYMPDVVTFTILVDVLCKARDFDEAFATFDVMRKQGILPNLHTYNTLICG 411
Query: 316 FAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPN 375
+G ++ A + M P +Y + + + + A + F ++K G VPN
Sbjct: 412 LLRAGRIEDALKLLGTMESVGVQPTAYTYNIFIDYFGKSGETGKAVETFEKMKAKGIVPN 471
Query: 376 VITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYK 435
++ + A++ L + +++ +R NG+ P+ + +M Y K D AV
Sbjct: 472 IVACNASLYSLAEMGRLREAKTMFNGLRENGLAPDSVTYNMMMKCYSKVGQVDEAVNLLS 531
Query: 436 EMESCGFPPDQKAKNILLSLAKTADERNEA 465
EM G PD N L+ A +EA
Sbjct: 532 EMIRNGCEPDVIVVNSLIDSLYKAGRVDEA 561
Score = 139 bits (349), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 124/493 (25%), Positives = 210/493 (42%), Gaps = 68/493 (13%)
Query: 22 AADEAGKKNWRRLMNQIEEVGSAVAVLRSERTRGQPLPKDLVLGTLVRLKQLKKWNVVSE 81
A D + +++ +V AV +L SE R P +V+ +L+ L K V E
Sbjct: 504 APDSVTYNMMMKCYSKVGQVDEAVNLL-SEMIRNGCEPDVIVVNSLI--DSLYKAGRVDE 560
Query: 82 VLEWLRIQSWWDFNEM----------DFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSV 131
+W F+ M + L++ GK+G KA ++ M +K +P+
Sbjct: 561 --------AWQMFDRMKDMKLSPTVVTYNTLLSGLGKEGRVQKAIELFESMIEKKCSPNT 612
Query: 132 VSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMT 191
+S L++ + + + A +F +M +P LTY ++ ++ NK A F
Sbjct: 613 ISFNTLLDCFCKNDEVELALKMFSKMTVMDCKPDVLTYNTVIYGLIKENKVNHAFWFFHQ 672
Query: 192 LLDEEKSPLKPDQKMFHMMI------------------YMYKK------------AGG-- 219
L K + PD ++ +MY+ GG
Sbjct: 673 L----KKSMHPDHVTICTLLPGLVKCGQIGDAISIARDFMYQVRFRVNRSFWEDLMGGTL 728
Query: 220 ----YEKARKLFALMAERGVQQSTVTYNSLMSFETNYKE---VSKIYDQM-QRAGLQPDV 271
+KA + G+ + L+ +K +I+D+ ++ G+ P +
Sbjct: 729 VEAEMDKAIIFAEELVLNGICREDSFLIPLVRVLCKHKRELYAYQIFDKFTKKLGISPTL 788
Query: 272 VSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKC 331
SY LI + E+A +F++M + G P +N+LL SG + + ++K
Sbjct: 789 ASYNCLIGELLEVHYTEKAWDLFKDMKNVGCAPDAFTFNMLLAVHGKSGKITELFELYKE 848
Query: 332 MRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNN 391
M RC PD +Y ++S+ +++++ A FF L F P TYG LI G AKV
Sbjct: 849 MISRRCKPDAITYNIVISSLAKSNNLDKALDFFYDLVSSDFRPTPRTYGPLIDGLAKVGR 908
Query: 392 LEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNI 451
LE+ M ++++M G KPN IF +++ YGK D ++A +K M + G PD K+ I
Sbjct: 909 LEEAMRLFEEMSDYGCKPNCAIFNILINGYGKIGDTETACQLFKRMVNEGIRPDLKSYTI 968
Query: 452 L---LSLAKTADE 461
L L LA DE
Sbjct: 969 LVDCLCLAGRVDE 981
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 89/368 (24%), Positives = 177/368 (48%), Gaps = 6/368 (1%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
+++ ++ L+ + GD + ++ S M GY P VV+ T L++ + + A A F
Sbjct: 331 DQVIYITLLDKFNDFGDLDTFKEFWSQMEADGYMPDVVTFTILVDVLCKARDFDEAFATF 390
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
M+ G P+ TY ++ + A + ++A ++ T+ E ++P +++ I +
Sbjct: 391 DVMRKQGILPNLHTYNTLICGLLRAGRIEDALKLLGTM---ESVGVQPTAYTYNIFIDYF 447
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYN-SLMSFET--NYKEVSKIYDQMQRAGLQPDV 271
K+G KA + F M +G+ + V N SL S +E +++ ++ GL PD
Sbjct: 448 GKSGETGKAVETFEKMKAKGIVPNIVACNASLYSLAEMGRLREAKTMFNGLRENGLAPDS 507
Query: 272 VSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKC 331
V+Y +++ Y K + +EA+ + EM+ G P N L+D+ +G VD+A +F
Sbjct: 508 VTYNMMMKCYSKVGQVDEAVNLLSEMIRNGCEPDVIVVNSLIDSLYKAGRVDEAWQMFDR 567
Query: 332 MRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNN 391
M+ + SP + +Y T+LS ++ A + F + + PN I++ TL+ + K +
Sbjct: 568 MKDMKLSPTVVTYNTLLSGLGKEGRVQKAIELFESMIEKKCSPNTISFNTLLDCFCKNDE 627
Query: 392 LEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNI 451
+E ++++ KM V KP+ + T++ K + A ++ +++ P +
Sbjct: 628 VELALKMFSKMTVMDCKPDVLTYNTVIYGLIKENKVNHAFWFFHQLKKSMHPDHVTICTL 687
Query: 452 LLSLAKTA 459
L L K
Sbjct: 688 LPGLVKCG 695
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 78/328 (23%), Positives = 162/328 (49%), Gaps = 6/328 (1%)
Query: 121 FMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEAN 180
F K G +P++ S+ L+ + A +F+ M++ G P A T+ ++L + ++
Sbjct: 778 FTKKLGISPTLASYNCLIGELLEVHYTEKAWDLFKDMKNVGCAPDAFTFNMLLAVHGKSG 837
Query: 181 KFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTV 240
K E E++ ++ KPD ++++I K+ +KA F + + +
Sbjct: 838 KITELFELYKEMISRR---CKPDAITYNIVISSLAKSNNLDKALDFFYDLVSSDFRPTPR 894
Query: 241 TYNSL---MSFETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEM 297
TY L ++ +E +++++M G +P+ + +LIN YGK E A +F+ M
Sbjct: 895 TYGPLIDGLAKVGRLEEAMRLFEEMSDYGCKPNCAIFNILINGYGKIGDTETACQLFKRM 954
Query: 298 LDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDM 357
++ G+RP K+Y IL+D ++G VD+A F ++ PD +Y +++ + M
Sbjct: 955 VNEGIRPDLKSYTILVDCLCLAGRVDEALYYFNELKSTGLDPDFIAYNRIINGLGKSQRM 1014
Query: 358 EGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTI 417
E A + ++ G VP++ TY +L+ +E+ +Y+++++ G++P+ + +
Sbjct: 1015 EEALALYNEMRNRGIVPDLYTYNSLMLNLGLAGMVEQAKRMYEELQLAGLEPDVFTYNAL 1074
Query: 418 MDAYGKNKDFDSAVVWYKEMESCGFPPD 445
+ Y +++ + A YK M G P+
Sbjct: 1075 IRGYSLSENPEHAYTVYKNMMVDGCNPN 1102
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 75/275 (27%), Positives = 132/275 (48%), Gaps = 3/275 (1%)
Query: 218 GGYEKARKLFALMAERGVQQSTVTYNSLMSFETN---YKEVSKIYDQMQRAGLQPDVVSY 274
GG + + M + G + +YN L+ E ++Y +M GL+P + +Y
Sbjct: 171 GGLRQMTTVLNKMRKAGFVLNAYSYNGLIHLLIQSGFCGEALEVYRRMVSEGLKPSLKTY 230
Query: 275 ALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRR 334
+ L+ A GK R E + + +EM D G+RP + I + +G +D+A +F+ M
Sbjct: 231 SALMVALGKKRDSEMVMVLLKEMEDLGLRPNVYTFTICIRVLGRAGKIDEAYEIFRRMDD 290
Query: 335 DRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEK 394
+ C PD+ +YT ++ A NA +E A++ F ++K +G P+ + Y TL+ + +L+
Sbjct: 291 EGCGPDLVTYTVLIDALCNAGQLENAKELFVKMKANGHKPDQVIYITLLDKFNDFGDLDT 350
Query: 395 MMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLS 454
E + +M +G P+ FT ++D K +DFD A + M G P+ N L+
Sbjct: 351 FKEFWSQMEADGYMPDVVTFTILVDVLCKARDFDEAFATFDVMRKQGILPNLHTYNTLIC 410
Query: 455 LAKTADERNEANELLGNFNHPNNEPGINGLSISVD 489
A +A +LLG +P +I +D
Sbjct: 411 GLLRAGRIEDALKLLGTMESVGVQPTAYTYNIFID 445
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 85/325 (26%), Positives = 157/325 (48%), Gaps = 18/325 (5%)
Query: 73 LKKWN-VVSEVLEWLRIQSWWD-FNEM----------DFLMLITAYGKQGDFNKAEKVLS 120
L +N ++ E+LE + WD F +M F ML+ +GK G + ++
Sbjct: 788 LASYNCLIGELLEVHYTEKAWDLFKDMKNVGCAPDAFTFNMLLAVHGKSGKITELFELYK 847
Query: 121 FMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEAN 180
M + P +++ ++ + + A F + SS RP+ TY ++ +
Sbjct: 848 EMISRRCKPDAITYNIVISSLAKSNNLDKALDFFYDLVSSDFRPTPRTYGPLIDGLAKVG 907
Query: 181 KFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTV 240
+ +EA +F + D KP+ +F+++I Y K G E A +LF M G++
Sbjct: 908 RLEEAMRLFEEMSD---YGCKPNCAIFNILINGYGKIGDTETACQLFKRMVNEGIRPDLK 964
Query: 241 TYNSL---MSFETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEM 297
+Y L + E +++++ GL PD ++Y +IN GK++R EEALA++ EM
Sbjct: 965 SYTILVDCLCLAGRVDEALYYFNELKSTGLDPDFIAYNRIINGLGKSQRMEEALALYNEM 1024
Query: 298 LDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDM 357
+ G+ P YN L+ ++GMV+QA+ +++ ++ PD+ +Y ++ Y + +
Sbjct: 1025 RNRGIVPDLYTYNSLMLNLGLAGMVEQAKRMYEELQLAGLEPDVFTYNALIRGYSLSENP 1084
Query: 358 EGAEKFFRRLKQDGFVPNVITYGTL 382
E A ++ + DG PN+ TY L
Sbjct: 1085 EHAYTVYKNMMVDGCNPNIGTYAQL 1109
Score = 125 bits (313), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 80/296 (27%), Positives = 143/296 (48%), Gaps = 6/296 (2%)
Query: 161 GPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGY 220
G P+ +Y ++ +E + ++A ++F D + PD F+M++ ++ K+G
Sbjct: 783 GISPTLASYNCLIGELLEVHYTEKAWDLFK---DMKNVGCAPDAFTFNMLLAVHGKSGKI 839
Query: 221 EKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSKIYD---QMQRAGLQPDVVSYALL 277
+ +L+ M R + +TYN ++S + K D + + +P +Y L
Sbjct: 840 TELFELYKEMISRRCKPDAITYNIVISSLAKSNNLDKALDFFYDLVSSDFRPTPRTYGPL 899
Query: 278 INAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRC 337
I+ K R EEA+ +FEEM D G +P +NIL++ + G + A +FK M +
Sbjct: 900 IDGLAKVGRLEEAMRLFEEMSDYGCKPNCAIFNILINGYGKIGDTETACQLFKRMVNEGI 959
Query: 338 SPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMME 397
PD+ SYT ++ A ++ A +F LK G P+ I Y +I G K +E+ +
Sbjct: 960 RPDLKSYTILVDCLCLAGRVDEALYYFNELKSTGLDPDFIAYNRIINGLGKSQRMEEALA 1019
Query: 398 IYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILL 453
+Y++MR GI P+ + ++M G + A Y+E++ G PD N L+
Sbjct: 1020 LYNEMRNRGIVPDLYTYNSLMLNLGLAGMVEQAKRMYEELQLAGLEPDVFTYNALI 1075
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 87/379 (22%), Positives = 173/379 (45%), Gaps = 10/379 (2%)
Query: 117 KVLSFMNKKGYAPSVVSHTA----LMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQII 172
+ LS+ P+V+ T ++E + ++ A+F MQ R TY I
Sbjct: 104 RALSYFYSISEFPTVLHTTETCNFMLEFLRVHDKVEDMAAVFEFMQKKIIRRDLDTYLTI 163
Query: 173 LKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAE 232
K ++ V + K+ + ++ +I++ ++G +A +++ M
Sbjct: 164 FKALSIRGGLRQMTTVLNKM---RKAGFVLNAYSYNGLIHLLIQSGFCGEALEVYRRMVS 220
Query: 233 RGVQQSTVTYNSLMSF---ETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEE 289
G++ S TY++LM + + + V + +M+ GL+P+V ++ + I G+A + +E
Sbjct: 221 EGLKPSLKTYSALMVALGKKRDSEMVMVLLKEMEDLGLRPNVYTFTICIRVLGRAGKIDE 280
Query: 290 ALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLS 349
A +F M D G P Y +L+DA +G ++ A+ +F M+ + PD Y T+L
Sbjct: 281 AYEIFRRMDDEGCGPDLVTYTVLIDALCNAGQLENAKELFVKMKANGHKPDQVIYITLLD 340
Query: 350 AYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKP 409
+ + D++ ++F+ +++ DG++P+V+T+ L+ K + ++ +D MR GI P
Sbjct: 341 KFNDFGDLDTFKEFWSQMEADGYMPDVVTFTILVDVLCKARDFDEAFATFDVMRKQGILP 400
Query: 410 NQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELL 469
N + T++ + + A+ MES G P NI + + E +A E
Sbjct: 401 NLHTYNTLICGLLRAGRIEDALKLLGTMESVGVQPTAYTYNIFIDYFGKSGETGKAVETF 460
Query: 470 GNFNHPNNEPGINGLSISV 488
P I + S+
Sbjct: 461 EKMKAKGIVPNIVACNASL 479
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 90/185 (48%), Gaps = 8/185 (4%)
Query: 99 FLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQ 158
F +LI YGK GD A ++ M +G P + S+T L++ GR A F ++
Sbjct: 931 FNILINGYGKIGDTETACQLFKRMVNEGIRPDLKSYTILVDCLCLAGRVDEALYYFNELK 990
Query: 159 SSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKS-PLKPDQKMFHMMIYMYKKA 217
S+G P + Y I+ ++ + +EA + L +E ++ + PD ++ ++ A
Sbjct: 991 STGLDPDFIAYNRIINGLGKSQRMEEA----LALYNEMRNRGIVPDLYTYNSLMLNLGLA 1046
Query: 218 GGYEKARKLFALMAERGVQQSTVTYNSLM---SFETNYKEVSKIYDQMQRAGLQPDVVSY 274
G E+A++++ + G++ TYN+L+ S N + +Y M G P++ +Y
Sbjct: 1047 GMVEQAKRMYEELQLAGLEPDVFTYNALIRGYSLSENPEHAYTVYKNMMVDGCNPNIGTY 1106
Query: 275 ALLIN 279
A L N
Sbjct: 1107 AQLPN 1111
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/268 (21%), Positives = 111/268 (41%), Gaps = 3/268 (1%)
Query: 235 VQQSTVTYNSLMSFETNYKEV---SKIYDQMQRAGLQPDVVSYALLINAYGKARREEEAL 291
V +T T N ++ F + +V + +++ MQ+ ++ D+ +Y + A +
Sbjct: 118 VLHTTETCNFMLEFLRVHDKVEDMAAVFEFMQKKIIRRDLDTYLTIFKALSIRGGLRQMT 177
Query: 292 AVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAY 351
V +M AG +YN L+ SG +A V++ M + P + +Y+ ++ A
Sbjct: 178 TVLNKMRKAGFVLNAYSYNGLIHLLIQSGFCGEALEVYRRMVSEGLKPSLKTYSALMVAL 237
Query: 352 VNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQ 411
D E + ++ G PNV T+ I+ + +++ EI+ +M G P+
Sbjct: 238 GKKRDSEMVMVLLKEMEDLGLRPNVYTFTICIRVLGRAGKIDEAYEIFRRMDDEGCGPDL 297
Query: 412 TIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGN 471
+T ++DA ++A + +M++ G PDQ LL + + E
Sbjct: 298 VTYTVLIDALCNAGQLENAKELFVKMKANGHKPDQVIYITLLDKFNDFGDLDTFKEFWSQ 357
Query: 472 FNHPNNEPGINGLSISVDEEDDDDDDDE 499
P + +I VD D DE
Sbjct: 358 MEADGYMPDVVTFTILVDVLCKARDFDE 385
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/217 (23%), Positives = 93/217 (42%), Gaps = 14/217 (6%)
Query: 287 EEEALAVFEEMLDA--------------GVRPTHKAYNILLDAFAISGMVDQARTVFKCM 332
E+E L V + M D V T + N +L+ + V+ VF+ M
Sbjct: 89 EDEVLGVLKSMTDPIRALSYFYSISEFPTVLHTTETCNFMLEFLRVHDKVEDMAAVFEFM 148
Query: 333 RRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNL 392
++ D+ +Y T+ A + ++++ GFV N +Y LI +
Sbjct: 149 QKKIIRRDLDTYLTIFKALSIRGGLRQMTTVLNKMRKAGFVLNAYSYNGLIHLLIQSGFC 208
Query: 393 EKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNIL 452
+ +E+Y +M G+KP+ ++ +M A GK +D + +V KEME G P+ I
Sbjct: 209 GEALEVYRRMVSEGLKPSLKTYSALMVALGKKRDSEMVMVLLKEMEDLGLRPNVYTFTIC 268
Query: 453 LSLAKTADERNEANELLGNFNHPNNEPGINGLSISVD 489
+ + A + +EA E+ + P + ++ +D
Sbjct: 269 IRVLGRAGKIDEAYEIFRRMDDEGCGPDLVTYTVLID 305
>gi|356540087|ref|XP_003538522.1| PREDICTED: pentatricopeptide repeat-containing protein At5g39980,
chloroplastic-like [Glycine max]
Length = 667
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 92/378 (24%), Positives = 184/378 (48%), Gaps = 39/378 (10%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
LI K D++KA + S + P ++++ +++ +G+ ++ A + + M+ +
Sbjct: 220 LIDLARKLSDYSKAISIFSRLKASTITPDLIAYNSMINVFGKAKLFREARLLLQEMRDNA 279
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
+P ++Y +L ++V+ KF EA +F + ++E K PL D ++MI +Y + +
Sbjct: 280 VQPDTVSYSTLLAIYVDNQKFVEALSLF-SEMNEAKCPL--DLTTCNIMIDVYGQLHMPK 336
Query: 222 KARKLFALMAERGVQQSTVTYNSLMSFETN---YKEVSKIYDQMQRAGLQPDVVSYALLI 278
+A +LF M + G+Q + ++YN+L+ + E ++ MQ +Q +VV+Y +I
Sbjct: 337 EADRLFWSMRKMGIQPNVISYNTLLRVYGEADLFGEAIHLFRLMQSKDVQQNVVTYNTMI 396
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCS 338
N YGK E+A + +EM G+ P Y+ ++ + +G +D+A +F+ +R
Sbjct: 397 NIYGKTLEHEKATNLIQEMNKRGIEPNAITYSTIISIWEKAGKLDRAAILFQKLRSSGVR 456
Query: 339 PDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVP------------------------ 374
D Y TM+ AY + A++ LK+ +P
Sbjct: 457 IDEVLYQTMIVAYERTGLVAHAKRLLHELKRPDNIPRDTAIAILARAGRIEEATWVFRQA 516
Query: 375 -------NVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDF 427
++ +G +I ++K ++E+++KMR G P+ + +++A+GK ++F
Sbjct: 517 FDAREVKDISVFGCMINLFSKNKKYANVVEVFEKMREVGYFPDSDVIALVLNAFGKLREF 576
Query: 428 DSAVVWYKEM--ESCGFP 443
D A Y++M E C FP
Sbjct: 577 DKADALYRQMHEEGCVFP 594
Score = 148 bits (373), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 97/403 (24%), Positives = 184/403 (45%), Gaps = 7/403 (1%)
Query: 88 IQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKG-YAPSVVSHTALMEAYGRGGR 146
+ S ++ ++ +++ ++ D+ +A +L ++N K Y PS+ ++ L+ R +
Sbjct: 100 VMSPYNGRQLSMRFMVSLLSREPDWQRALALLDWINDKALYRPSLFAYNVLLRNVLRAKQ 159
Query: 147 YKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKM 206
+ A +F M+ G P TY ++ F + F + L E+ + D +
Sbjct: 160 WHLAHGLFDEMRQKGLSPDRYTYSTLITCFGKHGLFDSS---LFWLQQMEQDNVSGDLVL 216
Query: 207 FHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSF---ETNYKEVSKIYDQMQ 263
+ +I + +K Y KA +F+ + + + YNS+++ ++E + +M+
Sbjct: 217 YSNLIDLARKLSDYSKAISIFSRLKASTITPDLIAYNSMINVFGKAKLFREARLLLQEMR 276
Query: 264 RAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVD 323
+QPD VSY+ L+ Y ++ EAL++F EM +A NI++D + M
Sbjct: 277 DNAVQPDTVSYSTLLAIYVDNQKFVEALSLFSEMNEAKCPLDLTTCNIMIDVYGQLHMPK 336
Query: 324 QARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLI 383
+A +F MR+ P++ SY T+L Y A A FR ++ NV+TY T+I
Sbjct: 337 EADRLFWSMRKMGIQPNVISYNTLLRVYGEADLFGEAIHLFRLMQSKDVQQNVVTYNTMI 396
Query: 384 KGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFP 443
Y K EK + +M GI+PN ++TI+ + K D A + ++++ S G
Sbjct: 397 NIYGKTLEHEKATNLIQEMNKRGIEPNAITYSTIISIWEKAGKLDRAAILFQKLRSSGVR 456
Query: 444 PDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGINGLSI 486
D+ ++ + A LL P+N P ++I
Sbjct: 457 IDEVLYQTMIVAYERTGLVAHAKRLLHELKRPDNIPRDTAIAI 499
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/203 (23%), Positives = 99/203 (48%), Gaps = 1/203 (0%)
Query: 288 EEALAVFEEMLDAGV-RPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTT 346
+ ALA+ + + D + RP+ AYN+LL + A +F MR+ SPD +Y+T
Sbjct: 125 QRALALLDWINDKALYRPSLFAYNVLLRNVLRAKQWHLAHGLFDEMRQKGLSPDRYTYST 184
Query: 347 MLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNG 406
+++ + + + + ++++QD +++ Y LI K+++ K + I+ +++ +
Sbjct: 185 LITCFGKHGLFDSSLFWLQQMEQDNVSGDLVLYSNLIDLARKLSDYSKAISIFSRLKAST 244
Query: 407 IKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEAN 466
I P+ + ++++ +GK K F A + +EM PD + + LL++ + EA
Sbjct: 245 ITPDLIAYNSMINVFGKAKLFREARLLLQEMRDNAVQPDTVSYSTLLAIYVDNQKFVEAL 304
Query: 467 ELLGNFNHPNNEPGINGLSISVD 489
L N + +I +D
Sbjct: 305 SLFSEMNEAKCPLDLTTCNIMID 327
>gi|410110125|gb|AFV61142.1| pentatricopeptide repeat-containing protein 123, partial [Lippia
micromera]
Length = 434
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 98/374 (26%), Positives = 181/374 (48%), Gaps = 37/374 (9%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
LI K D++KA + S + + G+ P +V++ A++ +G+ ++ A ++ M+++G
Sbjct: 56 LIELSRKXCDYSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMKTAG 115
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
P+ +Y +L ++ E KF EA VF + + E K L D ++MI +Y + G +
Sbjct: 116 VMPNTTSYSTLLTMYXENKKFLEALSVF-SEMREIKCXL--DLTTCNIMIDVYGQLGMAK 172
Query: 222 KARKLFALMAERGVQQSTVTYNSLMSFETN---YKEVSKIYDQMQRAGLQPDVVSYALLI 278
+A KLF M + G++ + V+YN+L+ + + E ++ MQR ++ +VV+Y +I
Sbjct: 173 EADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMI 232
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCS 338
YGK E+A + +EM G+ P Y+ ++ + G +D+A +F+ +R
Sbjct: 233 MIYGKTLEHEKANNLIQEMQSRGIEPNSITYSTIISIWGKXGKLDRAAMLFQKLRSSGVE 292
Query: 339 PDICSYTTMLSAY-------------------------------VNASDMEGAEKFFRRL 367
D + TM+ AY A +E A FR+
Sbjct: 293 IDQILFQTMIVAYERAGLVAHAKRLLHELKRPDNIPRDTAIHILAGAGRIEEATYVFRQA 352
Query: 368 KQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDF 427
G V ++ + +I +K ++E++DKMR G P+ + +++AYGK ++F
Sbjct: 353 IDAGEVKDITVFERMIHLLSKYKKYSNVIEVFDKMRGLGYFPDSNVIAVVLNAYGKLQEF 412
Query: 428 DSAVVWYKEMESCG 441
D A Y EM+ G
Sbjct: 413 DKANDVYMEMQEVG 426
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 86/331 (25%), Positives = 158/331 (47%), Gaps = 6/331 (1%)
Query: 152 AIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMI 211
+F M+ P TY ++ F + F +A ++ +++++ P D ++ +I
Sbjct: 1 GLFDEMRQRALSPDRYTYSTLITHFGKEGLF-DAALSWLQKMEQDQVP--GDLVLYSNLI 57
Query: 212 YMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSF---ETNYKEVSKIYDQMQRAGLQ 268
+ +K Y KA +F+ + G V YN++++ ++E + +M+ AG+
Sbjct: 58 ELSRKXCDYSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMKTAGVM 117
Query: 269 PDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTV 328
P+ SY+ L+ Y + ++ EAL+VF EM + NI++D + GM +A +
Sbjct: 118 PNTTSYSTLLTMYXENKKFLEALSVFSEMREIKCXLDLTTCNIMIDVYGQLGMAKEADKL 177
Query: 329 FKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAK 388
F MR+ P++ SY T+L Y +A A FR +++ NV+TY ++I Y K
Sbjct: 178 FWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMIMIYGK 237
Query: 389 VNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKA 448
EK + +M+ GI+PN ++TI+ +GK D A + ++++ S G DQ
Sbjct: 238 TLEHEKANNLIQEMQSRGIEPNSITYSTIISIWGKXGKLDRAAMLFQKLRSSGVEIDQIL 297
Query: 449 KNILLSLAKTADERNEANELLGNFNHPNNEP 479
++ + A A LL P+N P
Sbjct: 298 FQTMIVAYERAGLVAHAKRLLHELKRPDNIP 328
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 85/190 (44%)
Query: 292 AVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAY 351
+F+EM + P Y+ L+ F G+ D A + + M +D+ D+ Y+ ++
Sbjct: 1 GLFDEMRQRALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDQVPGDLVLYSNLIELS 60
Query: 352 VNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQ 411
D A F RLK+ GF P+++ Y +I + K + + +M+ G+ PN
Sbjct: 61 RKXCDYSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMKTAGVMPNT 120
Query: 412 TIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGN 471
T ++T++ Y +NK F A+ + EM D NI++ + EA++L
Sbjct: 121 TSYSTLLTMYXENKKFLEALSVFSEMREIKCXLDLTTCNIMIDVYGQLGMAKEADKLFWG 180
Query: 472 FNHPNNEPGI 481
EP +
Sbjct: 181 MRKMGIEPNV 190
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/244 (23%), Positives = 115/244 (47%), Gaps = 6/244 (2%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + + L+ YG F +A + M +K +VV++ +++ YG+ ++ A +
Sbjct: 189 NVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMIMIYGKTLEHEKANNLI 248
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
+ MQS G P+++TY I+ ++ + K A +F L S ++ DQ +F MI Y
Sbjct: 249 QEMQSRGIEPNSITYSTIISIWGKXGKLDRAAMLFQKL---RSSGVEIDQILFQTMIVAY 305
Query: 215 KKAGGYEKARKLFA-LMAERGVQQSTVTYNSLMSFETNYKEVSKIYDQMQRAGLQPDVVS 273
++AG A++L L + + T + +++ +E + ++ Q AG D+
Sbjct: 306 ERAGLVAHAKRLLHELKRPDNIPRDTAIH--ILAGAGRIEEATYVFRQAIDAGEVKDITV 363
Query: 274 YALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMR 333
+ +I+ K ++ + VF++M G P ++L+A+ D+A V+ M+
Sbjct: 364 FERMIHLLSKYKKYSNVIEVFDKMRGLGYFPDSNVIAVVLNAYGKLQEFDKANDVYMEMQ 423
Query: 334 RDRC 337
C
Sbjct: 424 EVGC 427
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 80/367 (21%), Positives = 151/367 (41%), Gaps = 55/367 (14%)
Query: 48 LRSERTRGQPLPKDLVLGTLVRL-----KQLKKWNVVSEVLEWLRIQSWWDFNEMDFLML 102
L SE +P TL+ + K L+ +V SE+ E I+ D + ++
Sbjct: 107 LISEMKTAGVMPNTTSYSTLLTMYXENKKFLEALSVFSEMRE---IKCXLDLTTCN--IM 161
Query: 103 ITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGP 162
I YG+ G +A+K+ M K G P+VVS+ L+ YG + A +FR MQ
Sbjct: 162 IDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNI 221
Query: 163 RPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEK 222
+ +TY + MI +Y K +EK
Sbjct: 222 EQNVVTY--------------------------------------NSMIMIYGKTLEHEK 243
Query: 223 ARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSK---IYDQMQRAGLQPDVVSYALLIN 279
A L M RG++ +++TY++++S ++ + ++ +++ +G++ D + + +I
Sbjct: 244 ANNLIQEMQSRGIEPNSITYSTIISIWGKXGKLDRAAMLFQKLRSSGVEIDQILFQTMIV 303
Query: 280 AYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSP 339
AY +A A + E+ P A +IL A G +++A VF+
Sbjct: 304 AYERAGLVAHAKRLLHELKRPDNIPRDTAIHILAGA----GRIEEATYVFRQAIDAGEVK 359
Query: 340 DICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIY 399
DI + M+ + F +++ G+ P+ ++ Y K+ +K ++Y
Sbjct: 360 DITVFERMIHLLSKYKKYSNVIEVFDKMRGLGYFPDSNVIAVVLNAYGKLQEFDKANDVY 419
Query: 400 DKMRVNG 406
+M+ G
Sbjct: 420 MEMQEVG 426
Score = 45.1 bits (105), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 26/123 (21%), Positives = 51/123 (41%)
Query: 363 FFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYG 422
F ++Q P+ TY TLI + K + + KM + + + +++ +++
Sbjct: 2 LFDEMRQRALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDQVPGDLVLYSNLIELSR 61
Query: 423 KNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGIN 482
K D+ A+ + ++ GF PD A N ++++ A EA L+ P
Sbjct: 62 KXCDYSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMKTAGVMPNTT 121
Query: 483 GLS 485
S
Sbjct: 122 SYS 124
>gi|242073534|ref|XP_002446703.1| hypothetical protein SORBIDRAFT_06g020845 [Sorghum bicolor]
gi|241937886|gb|EES11031.1| hypothetical protein SORBIDRAFT_06g020845 [Sorghum bicolor]
Length = 802
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 97/397 (24%), Positives = 184/397 (46%), Gaps = 31/397 (7%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N +F + GK F+ A +++ M KG+ P +++ ++ + + A +F
Sbjct: 255 NTANFARCLCGMGK---FDMAFQIIKVMMGKGFVPDTSTYSKVITFLCEAMKVEKAFLLF 311
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKS-PLKPDQKMFHMMIYM 213
+ M+S G P TY I++ F +A ++A F DE +S + + +++
Sbjct: 312 QEMKSVGVNPDVYTYTILIDSFCKAGLIEQARSWF----DEMRSIGCSANVVTYTALLHA 367
Query: 214 YKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSK---IYDQM-------- 262
Y KA +A +F M + G +T+TY++L+ E+ K +Y ++
Sbjct: 368 YLKAKQLPQASDIFNRMIDAGCPPNTITYSALVDGLCKAGEIQKACEVYTKLIGTSDNVG 427
Query: 263 --------QRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLD 314
+ P+VV+Y LI+ KA + +A + + ML G P H Y+ L+D
Sbjct: 428 SDFYFEGKHTDSIAPNVVTYGALIDGLCKAHKVVDAQELLDAMLSNGCEPNHIIYDALID 487
Query: 315 AFAISGMVDQARTVFKCMRRDRCS--PDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGF 372
F G +D A+ VF +R +C P + +YT+++ A ++ A K ++ +
Sbjct: 488 GFCKVGKIDNAQEVF--LRMSKCGYLPTVHTYTSLIDAMFKDRRLDLAMKVLSQMVESSC 545
Query: 373 VPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVV 432
PNV+TY +I G ++ +K +++ M G PN +T ++D GK+ D ++
Sbjct: 546 TPNVVTYTAMIDGLCRIGECQKALKLLSMMEEKGCSPNVVTYTALIDGLGKSGKVDLSLQ 605
Query: 433 WYKEMESCGFPPDQKAKNILLSLAKTADERNEANELL 469
+ +M + G P+ +L++ A +EA+ LL
Sbjct: 606 LFIQMSTKGCAPNYVTYRVLINHCCAAGLLDEAHSLL 642
Score = 139 bits (349), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 93/375 (24%), Positives = 166/375 (44%), Gaps = 28/375 (7%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + + L+T + K+ +++++ M K+G P+ +L+ +Y Y A +
Sbjct: 141 NVVTYRTLLTGFLKKKQLGWCKRIINMMMKEGCNPNPSLFNSLVHSYCNARDYPYAYKLL 200
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKE------AEEVFMTLLDEEKSPLKPDQKMFH 208
+RM G P + Y I + + AE+V+ +L K + F
Sbjct: 201 KRMADCGCPPGYVAYNIFIGSICGGEELPSPDLLALAEKVYEEMLASSCVLNKVNTANFA 260
Query: 209 MMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSK---IYDQMQRA 265
+ G ++ A ++ +M +G T TY+ +++F +V K ++ +M+
Sbjct: 261 RCLC---GMGKFDMAFQIIKVMMGKGFVPDTSTYSKVITFLCEAMKVEKAFLLFQEMKSV 317
Query: 266 GLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQA 325
G+ PDV +Y +LI+++ KA E+A + F+EM G Y LL A+ + + QA
Sbjct: 318 GVNPDVYTYTILIDSFCKAGLIEQARSWFDEMRSIGCSANVVTYTALLHAYLKAKQLPQA 377
Query: 326 RTVFKCMRRDRCSPDICSYTTMLSAYVNA----------------SDMEGAEKFFRRLKQ 369
+F M C P+ +Y+ ++ A SD G++ +F
Sbjct: 378 SDIFNRMIDAGCPPNTITYSALVDGLCKAGEIQKACEVYTKLIGTSDNVGSDFYFEGKHT 437
Query: 370 DGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDS 429
D PNV+TYG LI G K + + E+ D M NG +PN I+ ++D + K D+
Sbjct: 438 DSIAPNVVTYGALIDGLCKAHKVVDAQELLDAMLSNGCEPNHIIYDALIDGFCKVGKIDN 497
Query: 430 AVVWYKEMESCGFPP 444
A + M CG+ P
Sbjct: 498 AQEVFLRMSKCGYLP 512
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 98/426 (23%), Positives = 188/426 (44%), Gaps = 45/426 (10%)
Query: 78 VVSEVLEWLRIQ-SWWDFNEM----------DFLMLITAYGKQGDFNKAEKVLSFMNKKG 126
V++ + E ++++ ++ F EM + +LI ++ K G +A M G
Sbjct: 294 VITFLCEAMKVEKAFLLFQEMKSVGVNPDVYTYTILIDSFCKAGLIEQARSWFDEMRSIG 353
Query: 127 YAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAE 186
+ +VV++TAL+ AY + + A IF RM +G P+ +TY ++ +A + ++A
Sbjct: 354 CSANVVTYTALLHAYLKAKQLPQASDIFNRMIDAGCPPNTITYSALVDGLCKAGEIQKAC 413
Query: 187 EVFMTLLD-------------EEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAER 233
EV+ L+ + + P+ + +I KA A++L M
Sbjct: 414 EVYTKLIGTSDNVGSDFYFEGKHTDSIAPNVVTYGALIDGLCKAHKVVDAQELLDAMLSN 473
Query: 234 GVQQSTVTYNSLMSFETNYKEVSKI------YDQMQRAGLQPDVVSYALLINAYGKARRE 287
G + + + Y++L+ + +V KI + +M + G P V +Y LI+A K RR
Sbjct: 474 GCEPNHIIYDALID---GFCKVGKIDNAQEVFLRMSKCGYLPTVHTYTSLIDAMFKDRRL 530
Query: 288 EEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTM 347
+ A+ V +M+++ P Y ++D G +A + M CSP++ +YT +
Sbjct: 531 DLAMKVLSQMVESSCTPNVVTYTAMIDGLCRIGECQKALKLLSMMEEKGCSPNVVTYTAL 590
Query: 348 LSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGI 407
+ + ++ + + F ++ G PN +TY LI L++ + +M+
Sbjct: 591 IDGLGKSGKVDLSLQLFIQMSTKGCAPNYVTYRVLINHCCAAGLLDEAHSLLSEMK---- 646
Query: 408 KPNQTIFTTIMDAY-----GKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADER 462
QT + + Y G +K F +++ +E+ES G P +L+ A
Sbjct: 647 ---QTYWPKYLQGYCSVVQGFSKKFIASLGLLEELESHGTVPIAPVYGLLIDNFSKAGRL 703
Query: 463 NEANEL 468
EA EL
Sbjct: 704 EEALEL 709
Score = 108 bits (270), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 85/343 (24%), Positives = 152/343 (44%), Gaps = 42/343 (12%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + + LI K A+++L M G P+ + + AL++ + + G+ NA+ +F
Sbjct: 443 NVVTYGALIDGLCKAHKVVDAQELLDAMLSNGCEPNHIIYDALIDGFCKVGKIDNAQEVF 502
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
RM G P+ TY ++ + + A +V +++ S P+ + MI
Sbjct: 503 LRMSKCGYLPTVHTYTSLIDAMFKDRRLDLAMKVLSQMVE---SSCTPNVVTYTAMIDGL 559
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVS---KIYDQMQRAGLQPDV 271
+ G +KA KL ++M E+G + VTY +L+ +V +++ QM G P+
Sbjct: 560 CRIGECQKALKLLSMMEEKGCSPNVVTYTALIDGLGKSGKVDLSLQLFIQMSTKGCAPNY 619
Query: 272 VSYALLINAYGKARREEEA---------------------------------LAVFEEML 298
V+Y +LIN A +EA L + EE+
Sbjct: 620 VTYRVLINHCCAAGLLDEAHSLLSEMKQTYWPKYLQGYCSVVQGFSKKFIASLGLLEELE 679
Query: 299 DAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICS---YTTMLSAYVNAS 355
G P Y +L+D F+ +G +++A + K M S +I S YT+++ A AS
Sbjct: 680 SHGTVPIAPVYGLLIDNFSKAGRLEEALELHKEMMELSSSLNITSKDMYTSLIQALCLAS 739
Query: 356 DMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEI 398
+E A + + + + G VP + + LIKG KVN + +++
Sbjct: 740 QLEKAFELYSEITRKGVVPELSVFVCLIKGLIKVNKWNEALQL 782
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 78/190 (41%), Gaps = 32/190 (16%)
Query: 296 EMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFK---------------CMRRDRCSP- 339
E+ D G RP+ YN L+ A +G +D V K C + C
Sbjct: 30 ELKDFGYRPSGATYNALVQVLATAGQMDMGFRVQKEMSESGFCMDKFTVGCFAQALCKEG 89
Query: 340 ----------------DICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLI 383
D T M+S + AS + A F R++ + +PNV+TY TL+
Sbjct: 90 RWSDALVMIEREDFKLDTVLCTQMISGLMEASLFDEAISFLHRMRCNSCIPNVVTYRTLL 149
Query: 384 KGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFP 443
G+ K L I + M G PN ++F +++ +Y +D+ A K M CG P
Sbjct: 150 TGFLKKKQLGWCKRIINMMMKEGCNPNPSLFNSLVHSYCNARDYPYAYKLLKRMADCGCP 209
Query: 444 PDQKAKNILL 453
P A NI +
Sbjct: 210 PGYVAYNIFI 219
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 59/251 (23%), Positives = 113/251 (45%), Gaps = 36/251 (14%)
Query: 88 IQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRY 147
++S N + + +I + G+ KA K+LS M +KG +P+VV++TAL++ G+ G+
Sbjct: 541 VESSCTPNVVTYTAMIDGLCRIGECQKALKLLSMMEEKGCSPNVVTYTALIDGLGKSGKV 600
Query: 148 KNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVF------------------ 189
+ +F +M + G P+ +TY++++ A EA +
Sbjct: 601 DLSLQLFIQMSTKGCAPNYVTYRVLINHCCAAGLLDEAHSLLSEMKQTYWPKYLQGYCSV 660
Query: 190 -----------MTLLDE-EKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQ 237
+ LL+E E P ++ ++I + KAG E+A +L M E
Sbjct: 661 VQGFSKKFIASLGLLEELESHGTVPIAPVYGLLIDNFSKAGRLEEALELHKEMMELSSSL 720
Query: 238 STVT---YNSL---MSFETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEAL 291
+ + Y SL + + ++ ++Y ++ R G+ P++ + LI K + EAL
Sbjct: 721 NITSKDMYTSLIQALCLASQLEKAFELYSEITRKGVVPELSVFVCLIKGLIKVNKWNEAL 780
Query: 292 AVFEEMLDAGV 302
+ + D GV
Sbjct: 781 QLCYSICDEGV 791
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 82/419 (19%), Positives = 140/419 (33%), Gaps = 114/419 (27%)
Query: 126 GYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEA 185
GY PS ++ AL++ G+ + + M SG T + + ++ +A
Sbjct: 35 GYRPSGATYNALVQVLATAGQMDMGFRVQKEMSESGFCMDKFTVGCFAQALCKEGRWSDA 94
Query: 186 EEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSL 245
L+ E+ K D + MI G+ ++++
Sbjct: 95 ------LVMIEREDFKLDTVLCTQMI---------------------SGLMEASL----- 122
Query: 246 MSFETNYKEVSKIYDQMQRAGLQPDVVSYAL----------------------------- 276
+ E +M+ P+VV+Y
Sbjct: 123 ------FDEAISFLHRMRCNSCIPNVVTYRTLLTGFLKKKQLGWCKRIINMMMKEGCNPN 176
Query: 277 ------LINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILL------------DAFAI 318
L+++Y AR A + + M D G P + AYNI + D A+
Sbjct: 177 PSLFNSLVHSYCNARDYPYAYKLLKRMADCGCPPGYVAYNIFIGSICGGEELPSPDLLAL 236
Query: 319 S-----------------------------GMVDQARTVFKCMRRDRCSPDICSYTTMLS 349
+ G D A + K M PD +Y+ +++
Sbjct: 237 AEKVYEEMLASSCVLNKVNTANFARCLCGMGKFDMAFQIIKVMMGKGFVPDTSTYSKVIT 296
Query: 350 AYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKP 409
A +E A F+ +K G P+V TY LI + K +E+ +D+MR G
Sbjct: 297 FLCEAMKVEKAFLLFQEMKSVGVNPDVYTYTILIDSFCKAGLIEQARSWFDEMRSIGCSA 356
Query: 410 NQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANEL 468
N +T ++ AY K K A + M G PP+ + L+ A E +A E+
Sbjct: 357 NVVTYTALLHAYLKAKQLPQASDIFNRMIDAGCPPNTITYSALVDGLCKAGEIQKACEV 415
>gi|359488007|ref|XP_002263892.2| PREDICTED: pentatricopeptide repeat-containing protein
At1g62910-like [Vitis vinifera]
Length = 539
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 94/387 (24%), Positives = 178/387 (45%), Gaps = 6/387 (1%)
Query: 98 DFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRM 157
+F L+T+ K ++ + M+ G P V + T ++ ++ R A ++ ++
Sbjct: 58 EFAKLLTSIAKMKHYSTVLSLSKKMDSFGIPPDVYTLTIVINSFCHLNRVDFALSVLAKI 117
Query: 158 QSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKA 217
G +P T+ +++ K EA +VF ++ E +P+ + ++ K
Sbjct: 118 LKLGHQPDTATFTTLVRGLCVVGKIGEALDVFDKMVGEG---FQPNVVTYGTLMNGLCKD 174
Query: 218 GGYEKARKLFALMAERGVQQSTVTYNSLMSFETN---YKEVSKIYDQMQRAGLQPDVVSY 274
+A LF+ M +G+ TYNSL+ N +K V+ + ++M ++ + P+VVS
Sbjct: 175 RQLTEALNLFSEMIAKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVKSKIMPNVVSL 234
Query: 275 ALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRR 334
++++A K + EA V + M+ GV P Y L+D + +D+A VF M R
Sbjct: 235 NIVVDALCKEGKVTEAHDVVDMMIQGGVEPDVVTYAALMDGHCLRSEMDEAVKVFDMMVR 294
Query: 335 DRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEK 394
+ C ++ SY T+++ Y ++ A F + + +PN +TY TLI G V L+
Sbjct: 295 NGCVCNVVSYNTLINGYCKIQRIDKAMYLFEEMCRQELIPNTMTYSTLIHGLCHVGRLQD 354
Query: 395 MMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLS 454
+ ++++M G PN ++ ++D KN A+ K +E PD + NI +
Sbjct: 355 AIALFNEMVACGQIPNLVTYSILLDYLCKNHRLAEAMALLKAIEGSNLDPDVQVYNIAID 414
Query: 455 LAKTADERNEANELLGNFNHPNNEPGI 481
A + A +L N +P +
Sbjct: 415 GMCRAGDLEAARDLFSNLAPRGLQPDV 441
Score = 148 bits (374), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 96/388 (24%), Positives = 176/388 (45%), Gaps = 9/388 (2%)
Query: 108 KQGDFNKAEKVLSFMNKKGY---APSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRP 164
K FN + LS ++ + P + L+ + + Y ++ ++M S G P
Sbjct: 30 KSLHFNTLDDALSSFHRMLHMHPPPPIFEFAKLLTSIAKMKHYSTVLSLSKKMDSFGIPP 89
Query: 165 SALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKAR 224
T I++ F N+ A V +L K +PD F ++ G +A
Sbjct: 90 DVYTLTIVINSFCHLNRVDFALSVLAKIL---KLGHQPDTATFTTLVRGLCVVGKIGEAL 146
Query: 225 KLFALMAERGVQQSTVTYNSLMSFETNYKEVSK---IYDQMQRAGLQPDVVSYALLINAY 281
+F M G Q + VTY +LM+ +++++ ++ +M G+ PD+ +Y LI+A
Sbjct: 147 DVFDKMVGEGFQPNVVTYGTLMNGLCKDRQLTEALNLFSEMIAKGISPDIFTYNSLIHAL 206
Query: 282 GKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDI 341
+ + EM+ + + P + NI++DA G V +A V M + PD+
Sbjct: 207 CNLCEWKHVTTLLNEMVKSKIMPNVVSLNIVVDALCKEGKVTEAHDVVDMMIQGGVEPDV 266
Query: 342 CSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDK 401
+Y ++ + S+M+ A K F + ++G V NV++Y TLI GY K+ ++K M ++++
Sbjct: 267 VTYAALMDGHCLRSEMDEAVKVFDMMVRNGCVCNVVSYNTLINGYCKIQRIDKAMYLFEE 326
Query: 402 MRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADE 461
M + PN ++T++ A+ + EM +CG P+ +ILL
Sbjct: 327 MCRQELIPNTMTYSTLIHGLCHVGRLQDAIALFNEMVACGQIPNLVTYSILLDYLCKNHR 386
Query: 462 RNEANELLGNFNHPNNEPGINGLSISVD 489
EA LL N +P + +I++D
Sbjct: 387 LAEAMALLKAIEGSNLDPDVQVYNIAID 414
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 85/364 (23%), Positives = 167/364 (45%), Gaps = 6/364 (1%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + + L+ K +A + S M KG +P + ++ +L+ A +K+ +
Sbjct: 160 NVVTYGTLMNGLCKDRQLTEALNLFSEMIAKGISPDIFTYNSLIHALCNLCEWKHVTTLL 219
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
M S P+ ++ I++ + K EA +V ++ + ++PD + ++ +
Sbjct: 220 NEMVKSKIMPNVVSLNIVVDALCKEGKVTEAHDVVDMMI---QGGVEPDVVTYAALMDGH 276
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSK---IYDQMQRAGLQPDV 271
++A K+F +M G + V+YN+L++ + + K ++++M R L P+
Sbjct: 277 CLRSEMDEAVKVFDMMVRNGCVCNVVSYNTLINGYCKIQRIDKAMYLFEEMCRQELIPNT 336
Query: 272 VSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKC 331
++Y+ LI+ R ++A+A+F EM+ G P Y+ILLD + + +A + K
Sbjct: 337 MTYSTLIHGLCHVGRLQDAIALFNEMVACGQIPNLVTYSILLDYLCKNHRLAEAMALLKA 396
Query: 332 MRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNN 391
+ PD+ Y + A D+E A F L G P+V T+ +I+G K
Sbjct: 397 IEGSNLDPDVQVYNIAIDGMCRAGDLEAARDLFSNLAPRGLQPDVWTHNIMIRGLCKRGL 456
Query: 392 LEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNI 451
L++ +++ +M NG N + TI +N A+ +EM + GF D +
Sbjct: 457 LDEASKLFREMDENGCLRNGCTYNTITQGLLQNNKTSRAIQLLEEMLARGFSADVSTTAL 516
Query: 452 LLSL 455
L+ +
Sbjct: 517 LVKM 520
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 76/328 (23%), Positives = 137/328 (41%), Gaps = 48/328 (14%)
Query: 45 VAVLRSERTRGQPLPKDLVLGTLVRLKQLKKWNVVSEVLEW--LRIQSWWDFNEMDFLML 102
V L +E + + +P + L +V L K V+E + + IQ + + + + L
Sbjct: 215 VTTLLNEMVKSKIMPNVVSLNIVV--DALCKEGKVTEAHDVVDMMIQGGVEPDVVTYAAL 272
Query: 103 ITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGR------------------- 143
+ + + + ++A KV M + G +VVS+ L+ Y +
Sbjct: 273 MDGHCLRSEMDEAVKVFDMMVRNGCVCNVVSYNTLINGYCKIQRIDKAMYLFEEMCRQEL 332
Query: 144 ----------------GGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEE 187
GR ++A A+F M + G P+ +TY I+L + ++ EA
Sbjct: 333 IPNTMTYSTLIHGLCHVGRLQDAIALFNEMVACGQIPNLVTYSILLDYLCKNHRLAEA-- 390
Query: 188 VFMTLLDE-EKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLM 246
M LL E S L PD +++++ I +AG E AR LF+ +A RG+Q T+N ++
Sbjct: 391 --MALLKAIEGSNLDPDVQVYNIAIDGMCRAGDLEAARDLFSNLAPRGLQPDVWTHNIMI 448
Query: 247 SFETN---YKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVR 303
E SK++ +M G + +Y + + + A+ + EEML G
Sbjct: 449 RGLCKRGLLDEASKLFREMDENGCLRNGCTYNTITQGLLQNNKTSRAIQLLEEMLARGFS 508
Query: 304 PTHKAYNILLDAFAISGMVDQARTVFKC 331
+L+ + G+ DQ+ C
Sbjct: 509 ADVSTTALLVKMLSDDGL-DQSVKQILC 535
>gi|147778634|emb|CAN76112.1| hypothetical protein VITISV_005527 [Vitis vinifera]
Length = 1494
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 99/374 (26%), Positives = 180/374 (48%), Gaps = 12/374 (3%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
LI AY G + +A + + M + G +P+V S LM+A GR + + +Q G
Sbjct: 820 LIHAYAASGCYERARAIFNTMMRDGPSPTVDSVNGLMQALIVDGRLDELYVVIQELQDMG 879
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
+ S + ++L F A E ++++ + + + P ++ +MI + K +
Sbjct: 880 FKISKSSITLMLDAFAHAGNIFEVKKIYQGM---KAAGYFPTMHLYRIMIGLLAKG---K 933
Query: 222 KARKLFALMAERGV---QQSTVTYNSLMSFET---NYKEVSKIYDQMQRAGLQPDVVSYA 275
+ R + A+++E V + +NS++ T ++K+ ++Y +Q AGL+PD +Y
Sbjct: 934 RVRDVEAMVSEMEVAXFKPDLSIWNSVLKLYTGIGDFKKTGQVYQLIQEAGLKPDEDTYN 993
Query: 276 LLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRD 335
LI Y + RR EE L++ EM G+ P Y L+ AF MV+QA +F+ +
Sbjct: 994 TLILMYCRDRRPEEGLSLMHEMRRVGLEPKLDTYKSLISAFGKLQMVEQAEELFEGLLSK 1053
Query: 336 RCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKM 395
C D Y M+ + N+ + AEK +K+ G P + T L+ Y+ E+
Sbjct: 1054 ECKLDRSFYHIMMKMFRNSGNHSKAEKLLGVMKEAGVEPTIATMHLLMVSYSGSGQPEEA 1113
Query: 396 MEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSL 455
++ D ++V G+ + +++++DAY KN D + A+ EM+ G PD + +
Sbjct: 1114 EKVLDNLKVEGLPLSTLPYSSVIDAYLKNGDHNVAIQKLMEMKKDGLEPDHRIWTCFVRA 1173
Query: 456 AKTADERNEANELL 469
A + +EA LL
Sbjct: 1174 ASLSQHTSEAIVLL 1187
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 96/437 (21%), Positives = 194/437 (44%), Gaps = 20/437 (4%)
Query: 29 KNWRRLMNQIEEVGSAVAVLRSER--------TRGQPLPKDLVLGTLVRLKQLKKWNVVS 80
K+WR+ +++ + + L+SE + Q P D +V+ W
Sbjct: 150 KDWRQ---RVQFLTDRILGLKSEEFVADVLDDRKVQMTPTDFCF--VVKWVGQSSWQRAL 204
Query: 81 EVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEA 140
EV EWL ++ W+ N +++ GK A ++ + + +V + A+M
Sbjct: 205 EVYEWLNLRHWYSPNARMLATILSVLGKANQEALAVEIFA-RAEAAXGNTVQVYNAMMGV 263
Query: 141 YGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDE-EKSP 199
Y R GR+ + + M+S G P +++ ++ +++ + + LL+E +S
Sbjct: 264 YARTGRFTKVQELLDLMRSRGCEPDLVSFNTLINARLKSGTM--VTNLAIELLNEVRRSG 321
Query: 200 LKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNY---KEVS 256
++PD ++ +I + E+A K++ M Q TYN+++S +E
Sbjct: 322 IQPDIITYNTLISACSRESNLEEAVKVYNDMVAHRCQPDLWTYNAMISVYGRCGMSREAG 381
Query: 257 KIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAF 316
+++ ++ G PD V+Y L+ A+ + ++ + E+M+ G YN ++ +
Sbjct: 382 RLFKDLESKGFLPDAVTYNSLLYAFAREGNVDKVKEICEDMVKMGFGKDEMTYNTIIHMY 441
Query: 317 AISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNV 376
G D A ++ M+ SPD +YT ++ + A+ ++ A + + P +
Sbjct: 442 GKRGQHDLAFQLYSDMKLSGRSPDAVTYTVLIDSLGKANMIKEAAEVMSEMLNAXVKPTL 501
Query: 377 ITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKE 436
T+ LI GYAK + E +D M +GIKP+ ++ ++D + + A+ Y+E
Sbjct: 502 RTFSALICGYAKAGKRVEAEETFDCMLRSGIKPDHLAYSVMLDILLRFNESGKAMKLYQE 561
Query: 437 MESCGFPPDQKAKNILL 453
M F PD ++L
Sbjct: 562 MVLHSFKPDHALYEVML 578
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 80/289 (27%), Positives = 141/289 (48%), Gaps = 6/289 (2%)
Query: 202 PDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETN---YKEVSKI 258
P+ +M ++ + KA A ++FA AE + YN++M + +V ++
Sbjct: 218 PNARMLATILSVLGKANQEALAVEIFA-RAEAAXGNTVQVYNAMMGVYARTGRFTKVQEL 276
Query: 259 YDQMQRAGLQPDVVSYALLINAYGKARREEEALAV--FEEMLDAGVRPTHKAYNILLDAF 316
D M+ G +PD+VS+ LINA K+ LA+ E+ +G++P YN L+ A
Sbjct: 277 LDLMRSRGCEPDLVSFNTLINARLKSGTMVTNLAIELLNEVRRSGIQPDIITYNTLISAC 336
Query: 317 AISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNV 376
+ +++A V+ M RC PD+ +Y M+S Y A + F+ L+ GF+P+
Sbjct: 337 SRESNLEEAVKVYNDMVAHRCQPDLWTYNAMISVYGRCGMSREAGRLFKDLESKGFLPDA 396
Query: 377 ITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKE 436
+TY +L+ +A+ N++K+ EI + M G ++ + TI+ YGK D A Y +
Sbjct: 397 VTYNSLLYAFAREGNVDKVKEICEDMVKMGFGKDEMTYNTIIHMYGKRGQHDLAFQLYSD 456
Query: 437 MESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGINGLS 485
M+ G PD +L+ A+ EA E++ + +P + S
Sbjct: 457 MKLSGRSPDAVTYTVLIDSLGKANMIKEAAEVMSEMLNAXVKPTLRTFS 505
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 103/407 (25%), Positives = 189/407 (46%), Gaps = 17/407 (4%)
Query: 69 RLKQLKKWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMN-KKGY 127
R+ LK V++VL+ ++Q DF ++ G Q + +A +V ++N + Y
Sbjct: 162 RILGLKSEEFVADVLDDRKVQ----MTPTDFCFVVKWVG-QSSWQRALEVYEWLNLRHWY 216
Query: 128 APSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEE 187
+P+ ++ G+ + A IF R +++ + Y ++ ++ +F + +E
Sbjct: 217 SPNARMLATILSVLGKANQEALAVEIFARAEAAXGN-TVQVYNAMMGVYARTGRFTKVQE 275
Query: 188 VFMTLLDEEKS-PLKPDQKMFHMMIYMYKKAGGYEK--ARKLFALMAERGVQQSTVTYNS 244
LLD +S +PD F+ +I K+G A +L + G+Q +TYN+
Sbjct: 276 ----LLDLMRSRGCEPDLVSFNTLINARLKSGTMVTNLAIELLNEVRRSGIQPDIITYNT 331
Query: 245 LMSF---ETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAG 301
L+S E+N +E K+Y+ M QPD+ +Y +I+ YG+ EA +F+++ G
Sbjct: 332 LISACSRESNLEEAVKVYNDMVAHRCQPDLWTYNAMISVYGRCGMSREAGRLFKDLESKG 391
Query: 302 VRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAE 361
P YN LL AFA G VD+ + + + M + D +Y T++ Y + A
Sbjct: 392 FLPDAVTYNSLLYAFAREGNVDKVKEICEDMVKMGFGKDEMTYNTIIHMYGKRGQHDLAF 451
Query: 362 KFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAY 421
+ + +K G P+ +TY LI K N +++ E+ +M +KP F+ ++ Y
Sbjct: 452 QLYSDMKLSGRSPDAVTYTVLIDSLGKANMIKEAAEVMSEMLNAXVKPTLRTFSALICGY 511
Query: 422 GKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANEL 468
K A + M G PD A +++L + +E +A +L
Sbjct: 512 AKAGKRVEAEETFDCMLRSGIKPDHLAYSVMLDILLRFNESGKAMKL 558
Score = 126 bits (316), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 84/348 (24%), Positives = 173/348 (49%), Gaps = 14/348 (4%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
L+ A G ++ V+ + G+ S S T +++A+ G + I++ M+++G
Sbjct: 855 LMQALIVDGRLDELYVVIQELQDMGFKISKSSITLMLDAFAHAGNIFEVKKIYQGMKAAG 914
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
P+ Y+I++ L + + ++ E + + E + KPD +++ ++ +Y G ++
Sbjct: 915 YFPTMHLYRIMIGLLAKGKRVRDVEAMVSEM---EVAXFKPDLSIWNSVLKLYTGIGDFK 971
Query: 222 KARKLFALMAERGVQQSTVTYNSLMSF---ETNYKEVSKIYDQMQRAGLQPDVVSYALLI 278
K +++ L+ E G++ TYN+L+ + +E + +M+R GL+P + +Y LI
Sbjct: 972 KTGQVYQLIQEAGLKPDEDTYNTLILMYCRDRRPEEGLSLMHEMRRVGLEPKLDTYKSLI 1031
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCS 338
+A+GK + E+A +FE +L + Y+I++ F SG +A + M+
Sbjct: 1032 SAFGKLQMVEQAEELFEGLLSKECKLDRSFYHIMMKMFRNSGNHSKAEKLLGVMKEAGVE 1091
Query: 339 PDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNN----LEK 394
P I + ++ +Y + E AEK LK +G + + Y ++I Y K + ++K
Sbjct: 1092 PTIATMHLLMVSYSGSGQPEEAEKVLDNLKVEGLPLSTLPYSSVIDAYLKNGDHNVAIQK 1151
Query: 395 MMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGF 442
+ME M+ +G++P+ I+T + A ++ A+V K + GF
Sbjct: 1152 LME----MKKDGLEPDHRIWTCFVRAASLSQHTSEAIVLLKALRDTGF 1195
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 79/333 (23%), Positives = 159/333 (47%), Gaps = 13/333 (3%)
Query: 164 PSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKA 223
P+A IL + +AN+ A E+F ++ ++++ M+ +Y + G + K
Sbjct: 218 PNARMLATILSVLGKANQEALAVEIFA----RAEAAXGNTVQVYNAMMGVYARTGRFTKV 273
Query: 224 RKLFALMAERGVQQSTVTYNSLM-------SFETNYKEVSKIYDQMQRAGLQPDVVSYAL 276
++L LM RG + V++N+L+ + TN ++ ++++R+G+QPD+++Y
Sbjct: 274 QELLDLMRSRGCEPDLVSFNTLINARLKSGTMVTNL--AIELLNEVRRSGIQPDIITYNT 331
Query: 277 LINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDR 336
LI+A + EEA+ V+ +M+ +P YN ++ + GM +A +FK +
Sbjct: 332 LISACSRESNLEEAVKVYNDMVAHRCQPDLWTYNAMISVYGRCGMSREAGRLFKDLESKG 391
Query: 337 CSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMM 396
PD +Y ++L A+ +++ ++ + + GF + +TY T+I Y K +
Sbjct: 392 FLPDAVTYNSLLYAFAREGNVDKVKEICEDMVKMGFGKDEMTYNTIIHMYGKRGQHDLAF 451
Query: 397 EIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLA 456
++Y M+++G P+ +T ++D+ GK A EM + P + + L+
Sbjct: 452 QLYSDMKLSGRSPDAVTYTVLIDSLGKANMIKEAAEVMSEMLNAXVKPTLRTFSALICGY 511
Query: 457 KTADERNEANELLGNFNHPNNEPGINGLSISVD 489
A +R EA E +P S+ +D
Sbjct: 512 AKAGKRVEAEETFDCMLRSGIKPDHLAYSVMLD 544
Score = 101 bits (252), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 80/379 (21%), Positives = 174/379 (45%), Gaps = 7/379 (1%)
Query: 112 FNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQI 171
F +A ++ S M G PS + +++ Y + G + A + + + G ++
Sbjct: 724 FAEASQIFSDMRFYGVEPSDHLYRSMVVTYCKMGFPETAHYLIDQAEEKGLLFDDVSIHT 783
Query: 172 -ILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALM 230
+++ + + +++AE + +L +K + D+K+++ +I+ Y +G YE+AR +F M
Sbjct: 784 GVIEAYGKLKLWQKAESLVGSL--RQKCTM-VDRKVWNALIHAYAASGCYERARAIFNTM 840
Query: 231 AERGVQQSTVTYNSLMS---FETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARRE 287
G + + N LM + E+ + ++Q G + S L+++A+ A
Sbjct: 841 MRDGPSPTVDSVNGLMQALIVDGRLDELYVVIQELQDMGFKISKSSITLMLDAFAHAGNI 900
Query: 288 EEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTM 347
E +++ M AG PT Y I++ A V + M PD+ + ++
Sbjct: 901 FEVKKIYQGMKAAGYFPTMHLYRIMIGLLAKGKRVRDVEAMVSEMEVAXFKPDLSIWNSV 960
Query: 348 LSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGI 407
L Y D + + ++ +++ G P+ TY TLI Y + E+ + + +MR G+
Sbjct: 961 LKLYTGIGDFKKTGQVYQLIQEAGLKPDEDTYNTLILMYCRDRRPEEGLSLMHEMRRVGL 1020
Query: 408 KPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANE 467
+P + +++ A+GK + + A ++ + S D+ +I++ + + + ++A +
Sbjct: 1021 EPKLDTYKSLISAFGKLQMVEQAEELFEGLLSKECKLDRSFYHIMMKMFRNSGNHSKAEK 1080
Query: 468 LLGNFNHPNNEPGINGLSI 486
LLG EP I + +
Sbjct: 1081 LLGVMKEAGVEPTIATMHL 1099
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 85/384 (22%), Positives = 166/384 (43%), Gaps = 9/384 (2%)
Query: 86 LRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGG 145
L I + + + L ++ +YG G +A ++L F+ + + + AL+ +
Sbjct: 627 LAISQGCELDRENLLSILGSYGSSGRHLEARELLDFLREHSSGSHQLINEALIIMLCKAH 686
Query: 146 RYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANK-FKEAEEVFMTLLDEEKSPLKPDQ 204
+ +A + + + G + T L L E N+ F EA ++F D ++P
Sbjct: 687 QLGDALREYGKARDFGLFCGSFTMYESLLLCCEENELFAEASQIFS---DMRFYGVEPSD 743
Query: 205 KMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETN----YKEVSKIYD 260
++ M+ Y K G E A L E+G+ V+ ++ + +++ +
Sbjct: 744 HLYRSMVVTYCKMGFPETAHYLIDQAEEKGLLFDDVSIHTGVIEAYGKLKLWQKAESLVG 803
Query: 261 QMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISG 320
+++ D + LI+AY + E A A+F M+ G PT + N L+ A + G
Sbjct: 804 SLRQKCTMVDRKVWNALIHAYAASGCYERARAIFNTMMRDGPSPTVDSVNGLMQALIVDG 863
Query: 321 MVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYG 380
+D+ V + ++ S T ML A+ +A ++ +K ++ +K G+ P + Y
Sbjct: 864 RLDELYVVIQELQDMGFKISKSSITLMLDAFAHAGNIFEVKKIYQGMKAAGYFPTMHLYR 923
Query: 381 TLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESC 440
+I AK + + + +M V KP+ +I+ +++ Y DF Y+ ++
Sbjct: 924 IMIGLLAKGKRVRDVEAMVSEMEVAXFKPDLSIWNSVLKLYTGIGDFKKTGQVYQLIQEA 983
Query: 441 GFPPDQKAKNILLSLAKTADERNE 464
G PD+ N L+ L D R E
Sbjct: 984 GLKPDEDTYNTLI-LMYCRDRRPE 1006
>gi|255661216|gb|ACU25777.1| pentatricopeptide repeat-containing protein [Petrea racemosa]
Length = 426
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 95/379 (25%), Positives = 184/379 (48%), Gaps = 41/379 (10%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
LI K D++KA + S + + G P +V++ +++ +G+ +K A ++ M+ +G
Sbjct: 50 LIELSRKLCDYSKAISIFSRLKRSGITPDLVAYNSMINVFGKAKLFKEARSLISEMRVAG 109
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFM------TLLD--------------------- 194
P ++Y IL ++VE +KF EA VF LLD
Sbjct: 110 VMPDTVSYSTILTMYVENHKFLEALSVFREMREINCLLDLTTCNIMIDVYGQLDMAKEAD 169
Query: 195 -----EEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSF- 248
K ++P+ ++ ++ +Y A + +A LF LM + ++Q+ VTYN++M
Sbjct: 170 RLFWSMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNTMMMIY 229
Query: 249 --ETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTH 306
+++ + + +MQ G++P+ ++Y+ +I+ +GK + + A +F+++ +GV
Sbjct: 230 GKTLEHEKANNLIQEMQNRGIEPNAITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQ 289
Query: 307 KAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRR 366
Y ++ A+ +G+V A+ + ++R PD T + A +E A FR+
Sbjct: 290 VLYQTMIVAYERAGLVAHAKRLLHELKR----PDNIPRDTAIHILAGAGRIEEATWVFRQ 345
Query: 367 LKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKD 426
G V ++ + +I ++K + E+++KMR G P+ + +++AYGK +
Sbjct: 346 AIDAGEVKDITVFERMIDLFSKYRKYTNVGEVFEKMRGLGYFPDSNVIALVLNAYGKLHE 405
Query: 427 FDSAVVWYKEM--ESCGFP 443
FD A Y EM E C FP
Sbjct: 406 FDKANEVYMEMQDEGCVFP 424
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 87/326 (26%), Positives = 156/326 (47%), Gaps = 6/326 (1%)
Query: 164 PSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKA 223
P TY ++ F + F +A ++ +++++ P D ++ +I + +K Y KA
Sbjct: 7 PDRYTYSTLITHFGKEGLFDDALS-WLQKMEQDRVP--GDLVLYSNLIELSRKLCDYSKA 63
Query: 224 RKLFALMAERGVQQSTVTYNSLMSF---ETNYKEVSKIYDQMQRAGLQPDVVSYALLINA 280
+F+ + G+ V YNS+++ +KE + +M+ AG+ PD VSY+ ++
Sbjct: 64 ISIFSRLKRSGITPDLVAYNSMINVFGKAKLFKEARSLISEMRVAGVMPDTVSYSTILTM 123
Query: 281 YGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPD 340
Y + + EAL+VF EM + NI++D + M +A +F MR+ P+
Sbjct: 124 YVENHKFLEALSVFREMREINCLLDLTTCNIMIDVYGQLDMAKEADRLFWSMRKMGIEPN 183
Query: 341 ICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYD 400
+ SY T+L Y +A A FR +++ NV+TY T++ Y K EK +
Sbjct: 184 VVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNTMMMIYGKTLEHEKANNLIQ 243
Query: 401 KMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTAD 460
+M+ GI+PN ++TI+ +GK D A + ++++ S G DQ ++ + A
Sbjct: 244 EMQNRGIEPNAITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQVLYQTMIVAYERAG 303
Query: 461 ERNEANELLGNFNHPNNEPGINGLSI 486
A LL P+N P + I
Sbjct: 304 LVAHAKRLLHELKRPDNIPRDTAIHI 329
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/248 (24%), Positives = 117/248 (47%), Gaps = 7/248 (2%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + + L+ YG F +A + M +K +VV++ +M YG+ ++ A +
Sbjct: 183 NVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNTMMMIYGKTLEHEKANNLI 242
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
+ MQ+ G P+A+TY I+ ++ + K A +F L S ++ DQ ++ MI Y
Sbjct: 243 QEMQNRGIEPNAITYSTIISIWGKVGKLDRAAMLFQKL---RSSGVEIDQVLYQTMIVAY 299
Query: 215 KKAGGYEKARKLFA-LMAERGVQQSTVTYNSLMSFETNYKEVSKIYDQMQRAGLQPDVVS 273
++AG A++L L + + T + +++ +E + ++ Q AG D+
Sbjct: 300 ERAGLVAHAKRLLHELKRPDNIPRDTAIH--ILAGAGRIEEATWVFRQAIDAGEVKDITV 357
Query: 274 YALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMR 333
+ +I+ + K R+ VFE+M G P ++L+A+ D+A V+ M+
Sbjct: 358 FERMIDLFSKYRKYTNVGEVFEKMRGLGYFPDSNVIALVLNAYGKLHEFDKANEVYMEMQ 417
Query: 334 RDRCS-PD 340
+ C PD
Sbjct: 418 DEGCVFPD 425
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/181 (24%), Positives = 82/181 (45%)
Query: 301 GVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGA 360
+ P Y+ L+ F G+ D A + + M +DR D+ Y+ ++ D A
Sbjct: 4 ALSPDRYTYSTLITHFGKEGLFDDALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDYSKA 63
Query: 361 EKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDA 420
F RLK+ G P+++ Y ++I + K ++ + +MRV G+ P+ ++TI+
Sbjct: 64 ISIFSRLKRSGITPDLVAYNSMINVFGKAKLFKEARSLISEMRVAGVMPDTVSYSTILTM 123
Query: 421 YGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPG 480
Y +N F A+ ++EM D NI++ + D EA+ L + EP
Sbjct: 124 YVENHKFLEALSVFREMREINCLLDLTTCNIMIDVYGQLDMAKEADRLFWSMRKMGIEPN 183
Query: 481 I 481
+
Sbjct: 184 V 184
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/309 (21%), Positives = 130/309 (42%), Gaps = 45/309 (14%)
Query: 101 MLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSS 160
++I YG+ +A+++ M K G P+VVS+ L+ YG + A +FR MQ
Sbjct: 154 IMIDVYGQLDMAKEADRLFWSMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRK 213
Query: 161 GPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGY 220
+ +TY + M+ +Y K +
Sbjct: 214 NIEQNVVTY--------------------------------------NTMMMIYGKTLEH 235
Query: 221 EKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSK---IYDQMQRAGLQPDVVSYALL 277
EKA L M RG++ + +TY++++S ++ + ++ +++ +G++ D V Y +
Sbjct: 236 EKANNLIQEMQNRGIEPNAITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQVLYQTM 295
Query: 278 INAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRC 337
I AY +A A + E+ P A +IL A +G +++A VF+
Sbjct: 296 IVAYERAGLVAHAKRLLHELKRPDNIPRDTAIHIL----AGAGRIEEATWVFRQAIDAGE 351
Query: 338 SPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMME 397
DI + M+ + + F +++ G+ P+ ++ Y K++ +K E
Sbjct: 352 VKDITVFERMIDLFSKYRKYTNVGEVFEKMRGLGYFPDSNVIALVLNAYGKLHEFDKANE 411
Query: 398 IYDKMRVNG 406
+Y +M+ G
Sbjct: 412 VYMEMQDEG 420
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/216 (21%), Positives = 96/216 (44%)
Query: 266 GLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQA 325
L PD +Y+ LI +GK ++AL+ ++M V Y+ L++ +A
Sbjct: 4 ALSPDRYTYSTLITHFGKEGLFDDALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDYSKA 63
Query: 326 RTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKG 385
++F ++R +PD+ +Y +M++ + A + A ++ G +P+ ++Y T++
Sbjct: 64 ISIFSRLKRSGITPDLVAYNSMINVFGKAKLFKEARSLISEMRVAGVMPDTVSYSTILTM 123
Query: 386 YAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPD 445
Y + + + + ++ +MR + T ++D YG+ A + M G P+
Sbjct: 124 YVENHKFLEALSVFREMREINCLLDLTTCNIMIDVYGQLDMAKEADRLFWSMRKMGIEPN 183
Query: 446 QKAKNILLSLAKTADERNEANELLGNFNHPNNEPGI 481
+ N LL + A+ EA L N E +
Sbjct: 184 VVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNV 219
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 29/123 (23%), Positives = 65/123 (52%)
Query: 333 RRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNL 392
R SPD +Y+T+++ + + A + ++++QD +++ Y LI+ K+ +
Sbjct: 1 RERALSPDRYTYSTLITHFGKEGLFDDALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDY 60
Query: 393 EKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNIL 452
K + I+ +++ +GI P+ + ++++ +GK K F A EM G PD + + +
Sbjct: 61 SKAISIFSRLKRSGITPDLVAYNSMINVFGKAKLFKEARSLISEMRVAGVMPDTVSYSTI 120
Query: 453 LSL 455
L++
Sbjct: 121 LTM 123
>gi|255661160|gb|ACU25749.1| pentatricopeptide repeat-containing protein [Glandularia araucana]
Length = 426
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 97/374 (25%), Positives = 182/374 (48%), Gaps = 37/374 (9%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
LI K D++KA + S + + G+ P +V++ A++ +G+ ++ A ++ M+++G
Sbjct: 50 LIELSRKLCDYSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMRTAG 109
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
P+ +Y +L ++VE KF EA VF + E K L D ++MI +Y + G +
Sbjct: 110 VTPNTASYSTLLTMYVENKKFLEALSVFAEM-REIKCLL--DLTTCNIMIDVYGQLGMAK 166
Query: 222 KARKLFALMAERGVQQSTVTYNSLMSFETN---YKEVSKIYDQMQRAGLQPDVVSYALLI 278
+A KLF M + G++ + V+YN+L+ + + E ++ MQR ++ +VV+Y ++
Sbjct: 167 EADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMM 226
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCS 338
YGK E+A + +EM + G+ P Y+ ++ + G +D+A +F+ +R
Sbjct: 227 MIYGKTLEHEKANNLIQEMQNRGIEPNSITYSTIISIWGKVGKLDKAAMLFQKLRSSGVD 286
Query: 339 PDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVP------------------------ 374
D Y TM+ AY A + A++ LK+ +P
Sbjct: 287 IDQVLYQTMIVAYERAGLVAHAKRLLHELKRPDNIPRDIAIHILAGAGRIEEATWVFRQA 346
Query: 375 -------NVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDF 427
++ + +I ++K ++E++DKMR G P + +++AYGK +F
Sbjct: 347 IDAGEVKDITVFERMIHLFSKYKKYGNVVEVFDKMRGLGYFPESNVIALVLNAYGKLHEF 406
Query: 428 DSAVVWYKEMESCG 441
D A Y EM+ G
Sbjct: 407 DKANDVYMEMQEVG 420
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 85/318 (26%), Positives = 146/318 (45%), Gaps = 38/318 (11%)
Query: 200 LKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFE---TNYKEVS 256
L PD+ + +I + K G ++ A M + V V Y++L+ +Y +
Sbjct: 5 LSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDYSKAI 64
Query: 257 KIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAF 316
I+ +++R+G PD+V+Y +IN +GKA+ EA ++ EM AGV P +Y+ LL +
Sbjct: 65 SIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVTPNTASYSTLLTMY 124
Query: 317 AISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNV 376
+ +A +VF MR +C D+ + M+ Y + A+K F +++ G PNV
Sbjct: 125 VENKKFLEALSVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNV 184
Query: 377 ITYGTLIKGYA---------------KVNNLEK-------MMEIYDK------------- 401
++Y TL++ Y + N+E+ MM IY K
Sbjct: 185 VSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLIQE 244
Query: 402 MRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADE 461
M+ GI+PN ++TI+ +GK D A + ++++ S G DQ ++ + A
Sbjct: 245 MQNRGIEPNSITYSTIISIWGKVGKLDKAAMLFQKLRSSGVDIDQVLYQTMIVAYERAGL 304
Query: 462 RNEANELLGNFNHPNNEP 479
A LL P+N P
Sbjct: 305 VAHAKRLLHELKRPDNIP 322
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 45/181 (24%), Positives = 79/181 (43%)
Query: 301 GVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGA 360
+ P Y+ L+ F G+ D A + + M +DR D+ Y+ ++ D A
Sbjct: 4 ALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDYSKA 63
Query: 361 EKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDA 420
F RLK+ GF P+++ Y +I + K + + +MR G+ PN ++T++
Sbjct: 64 ISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVTPNTASYSTLLTM 123
Query: 421 YGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPG 480
Y +NK F A+ + EM D NI++ + EA++L EP
Sbjct: 124 YVENKKFLEALSVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPN 183
Query: 481 I 481
+
Sbjct: 184 V 184
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/244 (22%), Positives = 115/244 (47%), Gaps = 6/244 (2%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + + L+ YG F +A + M +K +VV++ ++M YG+ ++ A +
Sbjct: 183 NVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLI 242
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
+ MQ+ G P+++TY I+ ++ + K +A +F L S + DQ ++ MI Y
Sbjct: 243 QEMQNRGIEPNSITYSTIISIWGKVGKLDKAAMLFQKL---RSSGVDIDQVLYQTMIVAY 299
Query: 215 KKAGGYEKARKLFA-LMAERGVQQSTVTYNSLMSFETNYKEVSKIYDQMQRAGLQPDVVS 273
++AG A++L L + + + +++ +E + ++ Q AG D+
Sbjct: 300 ERAGLVAHAKRLLHELKRPDNIPRDIAIH--ILAGAGRIEEATWVFRQAIDAGEVKDITV 357
Query: 274 YALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMR 333
+ +I+ + K ++ + VF++M G P ++L+A+ D+A V+ M+
Sbjct: 358 FERMIHLFSKYKKYGNVVEVFDKMRGLGYFPESNVIALVLNAYGKLHEFDKANDVYMEMQ 417
Query: 334 RDRC 337
C
Sbjct: 418 EVGC 421
Score = 58.5 bits (140), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 28/123 (22%), Positives = 64/123 (52%)
Query: 333 RRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNL 392
R SPD +Y+T+++ + + A + ++++QD +++ Y LI+ K+ +
Sbjct: 1 RERALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDY 60
Query: 393 EKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNIL 452
K + I+ +++ +G P+ + +++ +GK K F A EM + G P+ + + L
Sbjct: 61 SKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVTPNTASYSTL 120
Query: 453 LSL 455
L++
Sbjct: 121 LTM 123
>gi|449463386|ref|XP_004149415.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
Length = 830
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 95/378 (25%), Positives = 178/378 (47%), Gaps = 8/378 (2%)
Query: 97 MDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRR 156
+ F +I K+G +A+ ++S + + P+ ++T+L+ + R A A+F R
Sbjct: 203 LTFNTMINILCKKGRVQEAKLIMSHIFRYDAYPNAFTYTSLILGHCRNHNLDLAFAMFDR 262
Query: 157 MQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEE-KSPLKPDQKMFHMMIYMYK 215
M G P+++TY ++ + +EA M +L+E + ++P + + +
Sbjct: 263 MVKDGCDPNSVTYSTLINGLCSEGRLEEA----MDMLEEMVQKGIEPTVYTYTIPLVSLC 318
Query: 216 KAGGYEKARKLFALMAERGVQQSTVTYNSL---MSFETNYKEVSKIYDQMQRAGLQPDVV 272
AG +A +L M +RG + T+ +L +S + ++ +Y +M GL P V
Sbjct: 319 DAGCSSEAVELLGKMKKRGCVPNIQTFTALISGLSRDGKFEIAIGLYHKMLADGLVPTTV 378
Query: 273 SYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCM 332
+Y LIN R E A +F+ ML G P+ + YN ++ F + G + +A +F M
Sbjct: 379 TYNALINQLCVEGRFETAFTIFKWMLSHGSLPSTQTYNEIIKCFCLMGDIQKAMVIFDKM 438
Query: 333 RRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNL 392
+ SP++ +Y T++ Y ++ A + +K +G P+ TY LI G+++ L
Sbjct: 439 LKAGSSPNVITYNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTELISGFSRGGKL 498
Query: 393 EKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNIL 452
E ++ M +GI PN +T I+D Y D A+ + +M G P + N++
Sbjct: 499 EHATSLFYGMMEHGISPNHVTYTAIIDGYFNLAKVDDALALFWKMVESGNLPSSQTYNVM 558
Query: 453 LSLAKTADERNEANELLG 470
+S + +EA G
Sbjct: 559 ISGFSKTNSISEAENFCG 576
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 99/395 (25%), Positives = 179/395 (45%), Gaps = 8/395 (2%)
Query: 93 DFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEA 152
D N + + LI +G +A +L M +KG P+V ++T + + G A
Sbjct: 269 DPNSVTYSTLINGLCSEGRLEEAMDMLEEMVQKGIEPTVYTYTIPLVSLCDAGCSSEAVE 328
Query: 153 IFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIY 212
+ +M+ G P+ T+ ++ KF+ A ++ +L + L P ++ +I
Sbjct: 329 LLGKMKKRGCVPNIQTFTALISGLSRDGKFEIAIGLYHKMLADG---LVPTTVTYNALIN 385
Query: 213 MYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSK---IYDQMQRAGLQP 269
G +E A +F M G ST TYN ++ ++ K I+D+M +AG P
Sbjct: 386 QLCVEGRFETAFTIFKWMLSHGSLPSTQTYNEIIKCFCLMGDIQKAMVIFDKMLKAGSSP 445
Query: 270 DVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVF 329
+V++Y LI Y K A+ + E M G++P Y L+ F+ G ++ A ++F
Sbjct: 446 NVITYNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTELISGFSRGGKLEHATSLF 505
Query: 330 KCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKV 389
M SP+ +YT ++ Y N + ++ A F ++ + G +P+ TY +I G++K
Sbjct: 506 YGMMEHGISPNHVTYTAIIDGYFNLAKVDDALALFWKMVESGNLPSSQTYNVMISGFSKT 565
Query: 390 NNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKA- 448
N++ + KM G+ PN +T+ +D +N A + EME + P+
Sbjct: 566 NSISEAENFCGKMVKQGLLPNVITYTSFIDGLCRNGRTGLAFKIFHEMEKRNYFPNLYTY 625
Query: 449 KNILLSLAKTA-DERNEANELLGNFNHPNNEPGIN 482
+++ L + E E LL H EP ++
Sbjct: 626 SSLIYGLCQEGRAEDAEMYNLLARLTHYGCEPNVD 660
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 99/388 (25%), Positives = 173/388 (44%), Gaps = 43/388 (11%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N F LI+ + G F A + M G P+ V++ AL+ GR++ A IF
Sbjct: 341 NIQTFTALISGLSRDGKFEIAIGLYHKMLADGLVPTTVTYNALINQLCVEGRFETAFTIF 400
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
+ M S G PS TY I+K F ++A +F +L SP + ++ +IY Y
Sbjct: 401 KWMLSHGSLPSTQTYNEIIKCFCLMGDIQKAMVIFDKMLKAGSSP---NVITYNTLIYGY 457
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSLMS-FETNYK--EVSKIYDQMQRAGLQPDV 271
K G A +L +M G++ TY L+S F K + ++ M G+ P+
Sbjct: 458 CKQGNLNNAMRLLEIMKGNGLKPDAWTYTELISGFSRGGKLEHATSLFYGMMEHGISPNH 517
Query: 272 VSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFA-------------- 317
V+Y +I+ Y + ++ALA+F +M+++G P+ + YN+++ F+
Sbjct: 518 VTYTAIIDGYFNLAKVDDALALFWKMVESGNLPSSQTYNVMISGFSKTNSISEAENFCGK 577
Query: 318 ----------------ISGMVDQART-----VFKCMRRDRCSPDICSYTTMLSAYVNASD 356
I G+ RT +F M + P++ +Y++++
Sbjct: 578 MVKQGLLPNVITYTSFIDGLCRNGRTGLAFKIFHEMEKRNYFPNLYTYSSLIYGLCQEGR 637
Query: 357 MEGAEKF--FRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIF 414
E AE + RL G PNV TY TL+KG + ++ M+ G++P++ I+
Sbjct: 638 AEDAEMYNLLARLTHYGCEPNVDTYTTLVKGLCGEGRCYEADQLVVSMQKKGLQPSEEIY 697
Query: 415 TTIMDAYGKNKDFDSAVVWYKEMESCGF 442
++ KN +SA+ + M++ GF
Sbjct: 698 RALLIGECKNLKVESALNIFYSMDTLGF 725
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 92/403 (22%), Positives = 178/403 (44%), Gaps = 44/403 (10%)
Query: 100 LMLITAYGKQGDFNKAEKVLSFMNKK---GYAPSVVSHTALMEAYGRGGRYKNAEAIFRR 156
+++I + +G+ + + LS +N K GY ++ S T L+ G+ A ++ +
Sbjct: 135 ILMIKSCRNEGEVKRVTQFLSEINSKYDFGY--TLCSFTTLLIQLGKFDMVDLARDMYIK 192
Query: 157 MQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSP----------------- 199
M +SG RPS LT+ ++ + + + +EA+ + + + P
Sbjct: 193 MLNSGIRPSLLTFNTMINILCKKGRVQEAKLIMSHIFRYDAYPNAFTYTSLILGHCRNHN 252
Query: 200 ---------------LKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYN- 243
P+ + +I G E+A + M ++G++ + TY
Sbjct: 253 LDLAFAMFDRMVKDGCDPNSVTYSTLINGLCSEGRLEEAMDMLEEMVQKGIEPTVYTYTI 312
Query: 244 SLMSF--ETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAG 301
L+S E ++ +M++ G P++ ++ LI+ + + E A+ ++ +ML G
Sbjct: 313 PLVSLCDAGCSSEAVELLGKMKKRGCVPNIQTFTALISGLSRDGKFEIAIGLYHKMLADG 372
Query: 302 VRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAE 361
+ PT YN L++ + G + A T+FK M P +Y ++ + D++ A
Sbjct: 373 LVPTTVTYNALINQLCVEGRFETAFTIFKWMLSHGSLPSTQTYNEIIKCFCLMGDIQKAM 432
Query: 362 KFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAY 421
F ++ + G PNVITY TLI GY K NL M + + M+ NG+KP+ +T ++ +
Sbjct: 433 VIFDKMLKAGSSPNVITYNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTELISGF 492
Query: 422 GKNKDFDSAVVWYKEMESCGFPPDQKAKNILL----SLAKTAD 460
+ + A + M G P+ ++ +LAK D
Sbjct: 493 SRGGKLEHATSLFYGMMEHGISPNHVTYTAIIDGYFNLAKVDD 535
Score = 105 bits (261), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 86/381 (22%), Positives = 160/381 (41%), Gaps = 17/381 (4%)
Query: 82 VLEWL----RIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTAL 137
+ +W+ + S +NE +I + GD KA + M K G +P+V+++ L
Sbjct: 399 IFKWMLSHGSLPSTQTYNE-----IIKCFCLMGDIQKAMVIFDKMLKAGSSPNVITYNTL 453
Query: 138 MEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEK 197
+ Y + G NA + M+ +G +P A TY ++ F K + A +F +++
Sbjct: 454 IYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTELISGFSRGGKLEHATSLFYGMMEHGI 513
Query: 198 SPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSK 257
SP + + +I Y + A LF M E G S+ TYN ++S + +S+
Sbjct: 514 SP---NHVTYTAIIDGYFNLAKVDDALALFWKMVESGNLPSSQTYNVMISGFSKTNSISE 570
Query: 258 ---IYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLD 314
+M + GL P+V++Y I+ + R A +F EM P Y+ L+
Sbjct: 571 AENFCGKMVKQGLLPNVITYTSFIDGLCRNGRTGLAFKIFHEMEKRNYFPNLYTYSSLIY 630
Query: 315 AFAISGMVDQARTVFKCMRRDR--CSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGF 372
G + A R C P++ +YTT++ A++ +++ G
Sbjct: 631 GLCQEGRAEDAEMYNLLARLTHYGCEPNVDTYTTLVKGLCGEGRCYEADQLVVSMQKKGL 690
Query: 373 VPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVV 432
P+ Y L+ G K +E + I+ M G + + + + ++ A K + A
Sbjct: 691 QPSEEIYRALLIGECKNLKVESALNIFYSMDTLGFQLHLSDYKALICALCKENFIEEAQC 750
Query: 433 WYKEMESCGFPPDQKAKNILL 453
++ M + D+ +LL
Sbjct: 751 IFQTMLEKHWNSDEVVWTVLL 771
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 76/350 (21%), Positives = 139/350 (39%), Gaps = 42/350 (12%)
Query: 92 WDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAE 151
W + E LI+ + + G A + M + G +P+ V++TA+++ Y + +A
Sbjct: 483 WTYTE-----LISGFSRGGKLEHATSLFYGMMEHGISPNHVTYTAIIDGYFNLAKVDDAL 537
Query: 152 AIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEE------------------------ 187
A+F +M SG PS+ TY +++ F + N EAE
Sbjct: 538 ALFWKMVESGNLPSSQTYNVMISGFSKTNSISEAENFCGKMVKQGLLPNVITYTSFIDGL 597
Query: 188 --------VFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKAR--KLFALMAERGVQQ 237
F + EK P+ + +IY + G E A L A + G +
Sbjct: 598 CRNGRTGLAFKIFHEMEKRNYFPNLYTYSSLIYGLCQEGRAEDAEMYNLLARLTHYGCEP 657
Query: 238 STVTYNSL---MSFETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVF 294
+ TY +L + E E ++ MQ+ GLQP Y L+ K + E AL +F
Sbjct: 658 NVDTYTTLVKGLCGEGRCYEADQLVVSMQKKGLQPSEEIYRALLIGECKNLKVESALNIF 717
Query: 295 EEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNA 354
M G + Y L+ A +++A+ +F+ M + D +T +L +
Sbjct: 718 YSMDTLGFQLHLSDYKALICALCKENFIEEAQCIFQTMLEKHWNSDEVVWTVLLDGLLKE 777
Query: 355 SDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRV 404
+ + K ++ N TY L + + ++ K+ +I ++ +
Sbjct: 778 GETDLCLKLLHVMESRNCTLNFQTYVMLARELSALDCAIKIPQISQQLGI 827
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 120/277 (43%), Gaps = 5/277 (1%)
Query: 83 LEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYG 142
L W ++S + + ++I+ + K ++AE M K+G P+V+++T+ ++
Sbjct: 539 LFWKMVESGNLPSSQTYNVMISGFSKTNSISEAENFCGKMVKQGLLPNVITYTSFIDGLC 598
Query: 143 RGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKP 202
R GR A IF M+ P+ TY ++ + + ++A E++ L +P
Sbjct: 599 RNGRTGLAFKIFHEMEKRNYFPNLYTYSSLIYGLCQEGRAEDA-EMYNLLARLTHYGCEP 657
Query: 203 DQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSK---IY 259
+ + ++ G +A +L M ++G+Q S Y +L+ E +V I+
Sbjct: 658 NVDTYTTLVKGLCGEGRCYEADQLVVSMQKKGLQPSEEIYRALLIGECKNLKVESALNIF 717
Query: 260 DQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAIS 319
M G Q + Y LI A K EEA +F+ ML+ + +LLD
Sbjct: 718 YSMDTLGFQLHLSDYKALICALCKENFIEEAQCIFQTMLEKHWNSDEVVWTVLLDGLLKE 777
Query: 320 GMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASD 356
G D + M C+ + +Y ML+ ++A D
Sbjct: 778 GETDLCLKLLHVMESRNCTLNFQTY-VMLARELSALD 813
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 54/232 (23%), Positives = 94/232 (40%), Gaps = 4/232 (1%)
Query: 282 GKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDI 341
G+ +R + L+ D G T ++ LL MVD AR ++ M P +
Sbjct: 145 GEVKRVTQFLSEINSKYDFGY--TLCSFTTLLIQLGKFDMVDLARDMYIKMLNSGIRPSL 202
Query: 342 CSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDK 401
++ TM++ ++ A+ + + PN TY +LI G+ + +NL+ ++D+
Sbjct: 203 LTFNTMINILCKKGRVQEAKLIMSHIFRYDAYPNAFTYTSLILGHCRNHNLDLAFAMFDR 262
Query: 402 MRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADE 461
M +G PN ++T+++ + A+ +EM G P I L A
Sbjct: 263 MVKDGCDPNSVTYSTLINGLCSEGRLEEAMDMLEEMVQKGIEPTVYTYTIPLVSLCDAGC 322
Query: 462 RNEANELLGNFNHPNNEPGINGLSISVDEEDDDDDDDEDDDDNIYHDGDGDG 513
+EA ELLG P I + + D + +YH DG
Sbjct: 323 SSEAVELLGKMKKRGCVPNIQTFTALIS--GLSRDGKFEIAIGLYHKMLADG 372
>gi|410110069|gb|AFV61114.1| pentatricopeptide repeat-containing protein 123, partial [Aloysia
lycioides]
Length = 429
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 99/374 (26%), Positives = 182/374 (48%), Gaps = 37/374 (9%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
LI K D++KA + S + + G+ P +V++ A++ +G+ ++ A ++ M+++G
Sbjct: 52 LIELSRKLCDYSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMRTAG 111
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
P+ +Y +L ++VE KF EA VF + + E K L D ++MI +Y + G +
Sbjct: 112 VMPNTASYSTLLTMYVENKKFLEALSVF-SEMREIKCLL--DLTTCNIMIDVYGQLGMAK 168
Query: 222 KARKLFALMAERGVQQSTVTYNSLMSFETN---YKEVSKIYDQMQRAGLQPDVVSYALLI 278
+A KLF M + G++ + V+YN+L+ + + E ++ MQR + +VV+Y ++
Sbjct: 169 EADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIVQNVVTYNSMM 228
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCS 338
YGK E+A + +EM + G+ P Y+ ++ + G +D+A +F+ +R
Sbjct: 229 MIYGKTLEHEKANNLIQEMQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVE 288
Query: 339 PDICSYTTMLSAY-------------------------------VNASDMEGAEKFFRRL 367
D Y TM+ AY A +E A FR+
Sbjct: 289 IDQVLYQTMIVAYERAGLVAHAKRLLHELKSPDNIPRDTAIHILAGAGRIEEATYVFRQA 348
Query: 368 KQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDF 427
G V ++ + +I ++K ++E++DKMR G P+ + +++AYGK +F
Sbjct: 349 IDAGEVKDITVFERMIHLFSKYKKYANVVEVFDKMRGLGYFPDSNVIALVLNAYGKLHEF 408
Query: 428 DSAVVWYKEMESCG 441
D A Y EM+ G
Sbjct: 409 DKANGVYMEMQEVG 422
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 84/318 (26%), Positives = 142/318 (44%), Gaps = 38/318 (11%)
Query: 200 LKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFE---TNYKEVS 256
L PD+ + +I + K G ++ A M + V V Y++L+ +Y +
Sbjct: 7 LSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDYSKAI 66
Query: 257 KIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAF 316
I+ +++R+G PD+V+Y +IN +GKA+ EA ++ EM AGV P +Y+ LL +
Sbjct: 67 SIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVMPNTASYSTLLTMY 126
Query: 317 AISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNV 376
+ +A +VF MR +C D+ + M+ Y + A+K F +++ G PNV
Sbjct: 127 VENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNV 186
Query: 377 ITYGTLIKGYA----------------------KVNNLEKMMEIYDK------------- 401
++Y TL++ Y V MM IY K
Sbjct: 187 VSYNTLLRVYGDAELFGEAIHLFRLMQRKNIVQNVVTYNSMMMIYGKTLEHEKANNLIQE 246
Query: 402 MRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADE 461
M+ GI+PN ++TI+ +GK D A + ++++ S G DQ ++ + A
Sbjct: 247 MQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQVLYQTMIVAYERAGL 306
Query: 462 RNEANELLGNFNHPNNEP 479
A LL P+N P
Sbjct: 307 VAHAKRLLHELKSPDNIP 324
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 81/186 (43%)
Query: 296 EMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNAS 355
EM + P Y+ L+ F G+ D A + + M +DR D+ Y+ ++
Sbjct: 1 EMRQRALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLC 60
Query: 356 DMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFT 415
D A F RLK+ GF P+++ Y +I + K + + +MR G+ PN ++
Sbjct: 61 DYSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVMPNTASYS 120
Query: 416 TIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHP 475
T++ Y +NK F A+ + EM D NI++ + EA++L
Sbjct: 121 TLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKM 180
Query: 476 NNEPGI 481
EP +
Sbjct: 181 GIEPNV 186
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 56/244 (22%), Positives = 117/244 (47%), Gaps = 6/244 (2%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + + L+ YG F +A + M +K +VV++ ++M YG+ ++ A +
Sbjct: 185 NVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIVQNVVTYNSMMMIYGKTLEHEKANNLI 244
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
+ MQ+ G P+++TY I+ ++ + K A +F L S ++ DQ ++ MI Y
Sbjct: 245 QEMQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKL---RSSGVEIDQVLYQTMIVAY 301
Query: 215 KKAGGYEKARKLFA-LMAERGVQQSTVTYNSLMSFETNYKEVSKIYDQMQRAGLQPDVVS 273
++AG A++L L + + + T + +++ +E + ++ Q AG D+
Sbjct: 302 ERAGLVAHAKRLLHELKSPDNIPRDTAIH--ILAGAGRIEEATYVFRQAIDAGEVKDITV 359
Query: 274 YALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMR 333
+ +I+ + K ++ + VF++M G P ++L+A+ D+A V+ M+
Sbjct: 360 FERMIHLFSKYKKYANVVEVFDKMRGLGYFPDSNVIALVLNAYGKLHEFDKANGVYMEMQ 419
Query: 334 RDRC 337
C
Sbjct: 420 EVGC 423
>gi|413948659|gb|AFW81308.1| hypothetical protein ZEAMMB73_549819 [Zea mays]
Length = 795
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 91/333 (27%), Positives = 162/333 (48%), Gaps = 8/333 (2%)
Query: 126 GY--APSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFK 183
GY +P+VVS+ +++ + + G A +F M G P +TY ++ +A
Sbjct: 193 GYNCSPNVVSYNTVIDGFFKEGEVDKAYFLFHEMMGQGLPPDVVTYNSLIDGLCKAQAMD 252
Query: 184 EAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYN 243
+A + + D+ + PD + +++MI Y G E+A +L M+ G+Q VTY+
Sbjct: 253 KAVAILQHMFDK---GVMPDTRTYNIMIRGYCSLGQLEEAVRLLKKMSGSGLQPDVVTYS 309
Query: 244 SLMSFETNY---KEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDA 300
L+ + E ++D M R G +P+ Y +L++ Y + + + M+
Sbjct: 310 LLIQYYCKIGRCAEARSVFDSMVRKGQKPNSTIYHILLHGYATKGALIDVRDLLDLMIRD 369
Query: 301 GVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGA 360
G+ H+A+NIL+ A+A G VD+A T F MR++ PD+ SY+T++ +E A
Sbjct: 370 GIPFEHRAFNILICAYAKHGAVDKAMTAFTEMRQNGLRPDVVSYSTVIHILCKTGRVEDA 429
Query: 361 EKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDA 420
F ++ +G PN+I++ +LI G + +K+ E+ +M GI P+ TIMD
Sbjct: 430 VYHFNQMVSEGLSPNIISFTSLIHGLCSIGEWKKVEELAFEMINRGIHPDAIFMNTIMDN 489
Query: 421 YGKNKDFDSAVVWYKEMESCGFPPDQKAKNILL 453
K A ++ + G PD + N L+
Sbjct: 490 LCKEGRVVEAQDFFDMVIHIGVKPDVVSYNTLI 522
Score = 132 bits (331), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 92/381 (24%), Positives = 177/381 (46%), Gaps = 41/381 (10%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + + +I + K+G+ +KA + M +G P VV++ +L++ + A AI
Sbjct: 199 NVVSYNTVIDGFFKEGEVDKAYFLFHEMMGQGLPPDVVTYNSLIDGLCKAQAMDKAVAIL 258
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
+ M G P TY I+++ + + +EA + + S L+PD + ++I Y
Sbjct: 259 QHMFDKGVMPDTRTYNIMIRGYCSLGQLEEAVRLLKKM---SGSGLQPDVVTYSLLIQYY 315
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSLM---SFETNYKEVSKIYDQMQRAGLQPDV 271
K G +AR +F M +G + ++ Y+ L+ + + +V + D M R G+ +
Sbjct: 316 CKIGRCAEARSVFDSMVRKGQKPNSTIYHILLHGYATKGALIDVRDLLDLMIRDGIPFEH 375
Query: 272 VSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKC 331
++ +LI AY K ++A+ F EM G+RP +Y+ ++ +G V+ A F
Sbjct: 376 RAFNILICAYAKHGAVDKAMTAFTEMRQNGLRPDVVSYSTVIHILCKTGRVEDAVYHFNQ 435
Query: 332 MRRDRCSPDICSYTTMLSAYVNASDM-------------------------------EG- 359
M + SP+I S+T+++ + + EG
Sbjct: 436 MVSEGLSPNIISFTSLIHGLCSIGEWKKVEELAFEMINRGIHPDAIFMNTIMDNLCKEGR 495
Query: 360 ---AEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTT 416
A+ FF + G P+V++Y TLI GY V +++ ++ D+M G++P+ + +
Sbjct: 496 VVEAQDFFDMVIHIGVKPDVVSYNTLIDGYCFVGKMDESIKQLDRMVSIGLRPDSWTYNS 555
Query: 417 IMDAYGKNKDFDSAVVWYKEM 437
+++ Y KN + A+ Y+EM
Sbjct: 556 LLNGYFKNGRVEDALALYREM 576
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 97/387 (25%), Positives = 177/387 (45%), Gaps = 7/387 (1%)
Query: 86 LRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGG 145
L I+ F F +LI AY K G +KA + M + G P VVS++ ++ + G
Sbjct: 365 LMIRDGIPFEHRAFNILICAYAKHGAVDKAMTAFTEMRQNGLRPDVVSYSTVIHILCKTG 424
Query: 146 RYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQK 205
R ++A F +M S G P+ +++ ++ ++K+ EE+ +++ + PD
Sbjct: 425 RVEDAVYHFNQMVSEGLSPNIISFTSLIHGLCSIGEWKKVEELAFEMINR---GIHPDAI 481
Query: 206 MFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLM---SFETNYKEVSKIYDQM 262
+ ++ K G +A+ F ++ GV+ V+YN+L+ F E K D+M
Sbjct: 482 FMNTIMDNLCKEGRVVEAQDFFDMVIHIGVKPDVVSYNTLIDGYCFVGKMDESIKQLDRM 541
Query: 263 QRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMV 322
GL+PD +Y L+N Y K R E+ALA++ EM V+ NI+L +G +
Sbjct: 542 VSIGLRPDSWTYNSLLNGYFKNGRVEDALALYREMFRKDVKFCAITSNIMLHGLFQAGRI 601
Query: 323 DQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTL 382
AR ++ M I +Y T+L S ++ A + F L+ F +V T+ +
Sbjct: 602 VAARELYMKMVDRGTQLRIETYNTVLGGLCENSCVDEALRMFEDLRSKEFELDVRTFSIV 661
Query: 383 IKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGF 442
I KV +++ ++ M + G P+ ++ ++ ++ + + + + ME G
Sbjct: 662 INALLKVGRIDEAKSLFSAMVLRGPVPDVITYSLMIKSHIEEGLLEESDNLFLSMEKNGC 721
Query: 443 PPDQKAKNILL-SLAKTADERNEANEL 468
D NI++ L + D R L
Sbjct: 722 AADSHMLNIIVRRLLEKGDVRRAGTYL 748
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 97/384 (25%), Positives = 158/384 (41%), Gaps = 43/384 (11%)
Query: 101 MLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNA-EAIFRRMQS 159
+LI + G + A + K G+ V+ L++ G R +A + +FRRM
Sbjct: 96 ILIRCFCTVGRLDLAFAAFALFLKTGWRVQNVTLNQLIKGLCDGNRTDDAMDMVFRRMPE 155
Query: 160 SGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGG 219
G P +Y ++K K +EA E+ + HM GG
Sbjct: 156 LGYTPDVFSYNALIKGLCVEKKSQEALEL-----------------LIHM-----TADGG 193
Query: 220 YEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSKIY---DQMQRAGLQPDVVSYAL 276
Y + V+YN+++ EV K Y +M GL PDVV+Y
Sbjct: 194 YN-------------CSPNVVSYNTVIDGFFKEGEVDKAYFLFHEMMGQGLPPDVVTYNS 240
Query: 277 LINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDR 336
LI+ KA+ ++A+A+ + M D GV P + YNI++ + G +++A + K M
Sbjct: 241 LIDGLCKAQAMDKAVAILQHMFDKGVMPDTRTYNIMIRGYCSLGQLEEAVRLLKKMSGSG 300
Query: 337 CSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMM 396
PD+ +Y+ ++ Y A F + + G PN Y L+ GYA L +
Sbjct: 301 LQPDVVTYSLLIQYYCKIGRCAEARSVFDSMVRKGQKPNSTIYHILLHGYATKGALIDVR 360
Query: 397 EIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPD----QKAKNIL 452
++ D M +GI F ++ AY K+ D A+ + EM G PD +IL
Sbjct: 361 DLLDLMIRDGIPFEHRAFNILICAYAKHGAVDKAMTAFTEMRQNGLRPDVVSYSTVIHIL 420
Query: 453 LSLAKTADERNEANELLGNFNHPN 476
+ D N+++ PN
Sbjct: 421 CKTGRVEDAVYHFNQMVSEGLSPN 444
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 81/364 (22%), Positives = 163/364 (44%), Gaps = 10/364 (2%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + +L+ Y +G +L M + G + L+ AY + G A F
Sbjct: 339 NSTIYHILLHGYATKGALIDVRDLLDLMIRDGIPFEHRAFNILICAYAKHGAVDKAMTAF 398
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
M+ +G RP ++Y ++ + + + ++A F ++ E L P+ F +I+
Sbjct: 399 TEMRQNGLRPDVVSYSTVIHILCKTGRVEDAVYHFNQMVSE---GLSPNIISFTSLIHGL 455
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSLM---SFETNYKEVSKIYDQMQRAGLQPDV 271
G ++K +L M RG+ + N++M E E +D + G++PDV
Sbjct: 456 CSIGEWKKVEELAFEMINRGIHPDAIFMNTIMDNLCKEGRVVEAQDFFDMVIHIGVKPDV 515
Query: 272 VSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKC 331
VSY LI+ Y + +E++ + M+ G+RP YN LL+ + +G V+ A +++
Sbjct: 516 VSYNTLIDGYCFVGKMDESIKQLDRMVSIGLRPDSWTYNSLLNGYFKNGRVEDALALYRE 575
Query: 332 MRRDRCSPDICSYTT--MLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKV 389
M R C+ T+ ML A + A + + ++ G + TY T++ G +
Sbjct: 576 MFRK--DVKFCAITSNIMLHGLFQAGRIVAARELYMKMVDRGTQLRIETYNTVLGGLCEN 633
Query: 390 NNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAK 449
+ +++ + +++ +R + + F+ +++A K D A + M G PD
Sbjct: 634 SCVDEALRMFEDLRSKEFELDVRTFSIVINALLKVGRIDEAKSLFSAMVLRGPVPDVITY 693
Query: 450 NILL 453
++++
Sbjct: 694 SLMI 697
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 67/289 (23%), Positives = 118/289 (40%), Gaps = 24/289 (8%)
Query: 219 GYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSK----------IYDQMQRAGLQ 268
G E A LF + + S +NS+++ S +++ M R+G+
Sbjct: 29 GREDALNLFDELLPQARPASVHAFNSVLTVVARADSSSSPRHSAALAVSLFNTMVRSGVN 88
Query: 269 PDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQART- 327
+LI + R + A A F L G R + N L I G+ D RT
Sbjct: 89 MMAAIIGILIRCFCTVGRLDLAFAAFALFLKTGWRVQNVTLNQL-----IKGLCDGNRTD 143
Query: 328 -----VFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDG---FVPNVITY 379
VF+ M +PD+ SY ++ + A + + DG PNV++Y
Sbjct: 144 DAMDMVFRRMPELGYTPDVFSYNALIKGLCVEKKSQEALELLIHMTADGGYNCSPNVVSY 203
Query: 380 GTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMES 439
T+I G+ K ++K ++ +M G+ P+ + +++D K + D AV + M
Sbjct: 204 NTVIDGFFKEGEVDKAYFLFHEMMGQGLPPDVVTYNSLIDGLCKAQAMDKAVAILQHMFD 263
Query: 440 CGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGINGLSISV 488
G PD + NI++ + + EA LL + +P + S+ +
Sbjct: 264 KGVMPDTRTYNIMIRGYCSLGQLEEAVRLLKKMSGSGLQPDVVTYSLLI 312
>gi|297723047|ref|NP_001173887.1| Os04g0351333 [Oryza sativa Japonica Group]
gi|255675359|dbj|BAH92615.1| Os04g0351333 [Oryza sativa Japonica Group]
Length = 740
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 99/403 (24%), Positives = 197/403 (48%), Gaps = 11/403 (2%)
Query: 58 LPKDLVLGTLVR-LKQLKKWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAE 116
LPK L+ ++++ L ++K+ + +++ + + S + + ++I K +KAE
Sbjct: 80 LPKILICNSIIKELCKMKEMDKAESIVQKM-VDSGIAPDLFTYSLIIDGLCKSKAMDKAE 138
Query: 117 KVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLF 176
+VL M + G P+ +++ +L+ Y G + + +F++M S G P+ +
Sbjct: 139 RVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQMSSCGVIPTVDNCNSFIHAL 198
Query: 177 VEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKA--GGYEKARKLFALMAERG 234
+ + EA+ +F +++ K P KPD + M++ Y A +F LM +G
Sbjct: 199 FKHGRTNEAKCIFDSMV--LKGP-KPDIISYSTMLHGYATATDSCLADVHNIFNLMLTKG 255
Query: 235 VQQSTVTYNSLMSFETNYKEVSK---IYDQMQRAGLQPDVVSYALLINAYGKARREEEAL 291
+ + +N L++ + K I++ MQ G+ PD V++A +I++ + R ++AL
Sbjct: 256 IAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDAL 315
Query: 292 AVFEEMLDAGVRPTHKAYNILLDAFAISG-MVDQARTVFKCMRRDRCSPDICSYTTMLSA 350
F M+D GV P+ Y L+ G +V + + M +D P + ++++++
Sbjct: 316 HKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSIINN 375
Query: 351 YVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPN 410
+ + + Q G PNV+T+ +L++GY V N+E+ + D M GI+PN
Sbjct: 376 LCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPN 435
Query: 411 QTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILL 453
I+ T++D Y KN D A+ +++M G P +I+L
Sbjct: 436 CYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIIL 478
Score = 135 bits (339), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 101/370 (27%), Positives = 165/370 (44%), Gaps = 48/370 (12%)
Query: 160 SGPR---PSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKK 216
+ PR P+ TY I++ + ++ + LL K+ L PD + + IY + K
Sbjct: 5 ACPRHSPPTIHTYNILIDCYRRVHRPDLGLAIVGRLL---KNGLGPDDFSYSL-IYGFVK 60
Query: 217 AGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSK---IYDQMQRAGLQPDVVS 273
G +KA LF M E+GV + NS++ KE+ K I +M +G+ PD+ +
Sbjct: 61 DGEVDKAHCLFLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSGIAPDLFT 120
Query: 274 YALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMR 333
Y+L+I+ K++ ++A V E+M++AG RP YN L+ ++ISGM +++ VFK M
Sbjct: 121 YSLIIDGLCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQMS 180
Query: 334 R-------DRCS----------------------------PDICSYTTMLSAYVNASD-- 356
D C+ PDI SY+TML Y A+D
Sbjct: 181 SCGVIPTVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYATATDSC 240
Query: 357 MEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTT 416
+ F + G PN + LI YA+ ++K M I++ M+ G+ P+ F T
Sbjct: 241 LADVHNIFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFAT 300
Query: 417 IMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGN-FNHP 475
++ + + D A+ + M G PP + L+ E +A EL+ N
Sbjct: 301 VISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKD 360
Query: 476 NNEPGINGLS 485
PG+ S
Sbjct: 361 IPPPGVKYFS 370
Score = 131 bits (330), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 94/376 (25%), Positives = 170/376 (45%), Gaps = 9/376 (2%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N+ F +LI AY + G +KA + M KG P V+ ++ + R GR +A F
Sbjct: 259 NKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHKF 318
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
M G PS Y +++ + +A+E+ +++++ P P K F +I
Sbjct: 319 NHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPP--PGVKYFSSIINNL 376
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSLM---SFETNYKEVSKIYDQMQRAGLQPDV 271
K G + + + +M + G + + VT+NSLM N +E + D M G++P+
Sbjct: 377 CKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNC 436
Query: 272 VSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKC 331
Y L++ Y K R ++AL VF +ML GV+PT Y+I+L + A+ +F
Sbjct: 437 YIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTAAKKMFHE 496
Query: 332 MRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNN 391
M + I +Y +L + + A +L ++IT+ +I KV
Sbjct: 497 MIESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISAMFKVGR 556
Query: 392 LEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKN- 450
++ E++D + G+ PN ++ ++ K + ++ A + +E G D + N
Sbjct: 557 RQEAKELFDAISTYGLVPNIQTYSMMITNLIKEESYEEADNLFISVEKSGHASDSRLLNH 616
Query: 451 ---ILLSLAKTADERN 463
+LL+ A+ A N
Sbjct: 617 IVRMLLNKAEVAKASN 632
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 83/359 (23%), Positives = 152/359 (42%), Gaps = 7/359 (1%)
Query: 115 AEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILK 174
+ + M KG AP+ L+ AY R G A IF MQ+ G P +T+ ++
Sbjct: 244 VHNIFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVIS 303
Query: 175 LFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERG 234
+ +A F ++D + P + ++ +I G KA++L + M +
Sbjct: 304 SLCRIGRLDDALHKFNHMVD---IGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKD 360
Query: 235 VQQSTVTYNSL----MSFETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEA 290
+ V Y S + E E I D M + G +P+VV++ L+ Y EEA
Sbjct: 361 IPPPGVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEA 420
Query: 291 LAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSA 350
A+ + M G+ P Y L+D + +G +D A TVF+ M P Y+ +L
Sbjct: 421 FALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHG 480
Query: 351 YVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPN 410
A A+K F + + G ++ TYG ++ G + N ++ + +K+ +K +
Sbjct: 481 LFQARRTTAAKKMFHEMIESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFD 540
Query: 411 QTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELL 469
F ++ A K A + + + G P+ + +++++ + EA+ L
Sbjct: 541 IITFNIVISAMFKVGRRQEAKELFDAISTYGLVPNIQTYSMMITNLIKEESYEEADNLF 599
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 102/499 (20%), Positives = 202/499 (40%), Gaps = 50/499 (10%)
Query: 61 DLVLGTLVRLKQLKKWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLS 120
L++ L + K + K VLE + +++ N + + LI Y G +N++ +V
Sbjct: 122 SLIIDGLCKSKAMDK---AERVLEQM-VEAGTRPNSITYNSLIHGYSISGMWNESVRVFK 177
Query: 121 FMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEA- 179
M+ G P+V + + + A + GR A+ IF M GP+P ++Y +L + A
Sbjct: 178 QMSSCGVIPTVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYATAT 237
Query: 180 -NKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQS 238
+ + +F +L + + P++ +F+++I Y + G +KA +F M +G+
Sbjct: 238 DSCLADVHNIFNLMLTKG---IAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPD 294
Query: 239 TVT-----------------------------------YNSLMSFETNYKEVSK----IY 259
TVT Y L+ N+ E+ K I
Sbjct: 295 TVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELIS 354
Query: 260 DQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAIS 319
+ M + P V ++ +IN K R E + + M+ G RP +N L++ + +
Sbjct: 355 EMMNKDIPPPGVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLV 414
Query: 320 GMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITY 379
G +++A + M P+ Y T++ Y ++ A FR + G P + Y
Sbjct: 415 GNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLY 474
Query: 380 GTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMES 439
++ G + +++ +M +G + + ++ +N D A + +++ +
Sbjct: 475 SIILHGLFQARRTTAAKKMFHEMIESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFA 534
Query: 440 CGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGINGLSISVDEEDDDDDDDE 499
D NI++S R EA EL + P I S+ + ++ +E
Sbjct: 535 MNVKFDIITFNIVISAMFKVGRRQEAKELFDAISTYGLVPNIQTYSMMITNLIKEESYEE 594
Query: 500 DDDDNIYHDGDGDGDGDDN 518
DN++ + G D+
Sbjct: 595 --ADNLFISVEKSGHASDS 611
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 56/239 (23%), Positives = 104/239 (43%), Gaps = 1/239 (0%)
Query: 269 PDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTV 328
P + +Y +LI+ Y + R + LA+ +L G+ P +Y+ L+ F G VD+A +
Sbjct: 12 PTIHTYNILIDCYRRVHRPDLGLAIVGRLLKNGLGPDDFSYS-LIYGFVKDGEVDKAHCL 70
Query: 329 FKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAK 388
F M P I +++ +M+ AE +++ G P++ TY +I G K
Sbjct: 71 FLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSGIAPDLFTYSLIIDGLCK 130
Query: 389 VNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKA 448
++K + ++M G +PN + +++ Y + ++ +V +K+M SCG P
Sbjct: 131 SKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQMSSCGVIPTVDN 190
Query: 449 KNILLSLAKTADERNEANELLGNFNHPNNEPGINGLSISVDEEDDDDDDDEDDDDNIYH 507
N + NEA + + +P I S + D D NI++
Sbjct: 191 CNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYATATDSCLADVHNIFN 249
>gi|255661180|gb|ACU25759.1| pentatricopeptide repeat-containing protein [Mulguraea aspera]
Length = 426
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 98/374 (26%), Positives = 183/374 (48%), Gaps = 37/374 (9%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
LI K D++KA + S + K G+ P +V++ A++ +G+ ++ A ++ M+++G
Sbjct: 50 LIELSRKLCDYSKAISIFSRLKKSGFMPDLVAYNAMINVFGKAKLFREARSLISEMRTAG 109
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
P+ +Y +L ++VE KF EA VF + E K L D ++MI +Y + G +
Sbjct: 110 VMPNTASYSTLLTMYVENKKFLEALSVFAEM-REIKCFL--DLTTCNIMIDVYGQLGMAK 166
Query: 222 KARKLFALMAERGVQQSTVTYNSLMSFETN---YKEVSKIYDQMQRAGLQPDVVSYALLI 278
+A KLF M + G++ + V+YN+L+ + + E ++ MQR ++ +VV+Y ++
Sbjct: 167 EADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMM 226
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCS 338
YGK E+A + +EM + G+ P Y+ ++ + G +D+A +F+ +R
Sbjct: 227 MIYGKTLEHEKANNLIQEMQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVE 286
Query: 339 PDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVP------------------------ 374
D Y TM+ AY A + A++ LK+ +P
Sbjct: 287 IDQVLYQTMIVAYERAGLVAHAKRLLHELKRPDNIPRDIAIHILAGAGRIEEATWVFRQA 346
Query: 375 -------NVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDF 427
++ + +I ++K ++E++DKMR G P+ + +++AYGK +F
Sbjct: 347 IDAGEVKDITVFERMIYLFSKYKKYGNVVEVFDKMRGLGYFPDSNVIALVLNAYGKLHEF 406
Query: 428 DSAVVWYKEMESCG 441
D A Y EM+ G
Sbjct: 407 DKANDVYMEMQEVG 420
Score = 125 bits (313), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 84/318 (26%), Positives = 145/318 (45%), Gaps = 38/318 (11%)
Query: 200 LKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFE---TNYKEVS 256
L PD+ + +I + K G ++ A M + V V Y++L+ +Y +
Sbjct: 5 LSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDYSKAI 64
Query: 257 KIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAF 316
I+ +++++G PD+V+Y +IN +GKA+ EA ++ EM AGV P +Y+ LL +
Sbjct: 65 SIFSRLKKSGFMPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVMPNTASYSTLLTMY 124
Query: 317 AISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNV 376
+ +A +VF MR +C D+ + M+ Y + A+K F +++ G PNV
Sbjct: 125 VENKKFLEALSVFAEMREIKCFLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNV 184
Query: 377 ITYGTLIKGYAKV---------------NNLEK-------MMEIYDK------------- 401
++Y TL++ Y N+E+ MM IY K
Sbjct: 185 VSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLIQE 244
Query: 402 MRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADE 461
M+ GI+PN ++TI+ +GK D A + ++++ S G DQ ++ + A
Sbjct: 245 MQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQVLYQTMIVAYERAGL 304
Query: 462 RNEANELLGNFNHPNNEP 479
A LL P+N P
Sbjct: 305 VAHAKRLLHELKRPDNIP 322
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 81/183 (44%)
Query: 299 DAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDME 358
D + P Y+ L+ F G+ D A + + M +DR D+ Y+ ++ D
Sbjct: 2 DRALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDYS 61
Query: 359 GAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIM 418
A F RLK+ GF+P+++ Y +I + K + + +MR G+ PN ++T++
Sbjct: 62 KAISIFSRLKKSGFMPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVMPNTASYSTLL 121
Query: 419 DAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNE 478
Y +NK F A+ + EM D NI++ + EA++L E
Sbjct: 122 TMYVENKKFLEALSVFAEMREIKCFLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIE 181
Query: 479 PGI 481
P +
Sbjct: 182 PNV 184
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/241 (24%), Positives = 110/241 (45%), Gaps = 37/241 (15%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + + L+ YG F +A + M +K +VV++ ++M YG+ ++ A +
Sbjct: 183 NVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLI 242
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
+ MQ+ G P+++TY I+ ++ + K A +F L S ++ DQ ++ MI Y
Sbjct: 243 QEMQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKL---RSSGVEIDQVLYQTMIVAY 299
Query: 215 KKAGGYEKARKLF---------------ALMAERG-VQQSTVTYNS-------------- 244
++AG A++L ++A G ++++T +
Sbjct: 300 ERAGLVAHAKRLLHELKRPDNIPRDIAIHILAGAGRIEEATWVFRQAIDAGEVKDITVFE 359
Query: 245 ----LMSFETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDA 300
L S Y V +++D+M+ G PD AL++NAYGK ++A V+ EM +
Sbjct: 360 RMIYLFSKYKKYGNVVEVFDKMRGLGYFPDSNVIALVLNAYGKLHEFDKANDVYMEMQEV 419
Query: 301 G 301
G
Sbjct: 420 G 420
>gi|410110067|gb|AFV61113.1| pentatricopeptide repeat-containing protein 123, partial [Aloysia
herrerae]
Length = 433
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 99/374 (26%), Positives = 182/374 (48%), Gaps = 37/374 (9%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
LI K D++KA + S + + G+ P +V++ A++ +G+ ++ A A+ M+++G
Sbjct: 53 LIELSRKLCDYSKAISIFSRLKRSGFMPDLVAYNAMINVFGKAKLFREARALISEMKTAG 112
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
P+ +Y +L ++VE KF EA VF + + E K L D ++MI +Y + G +
Sbjct: 113 VMPNTASYSTLLTMYVENKKFIEALSVF-SEMREIKCLL--DLTTCNIMIDVYGQLGMAK 169
Query: 222 KARKLFALMAERGVQQSTVTYNSLMSFETN---YKEVSKIYDQMQRAGLQPDVVSYALLI 278
+A KLF M + G++ + V+YN+L+ + + E ++ MQR ++ +VV+Y ++
Sbjct: 170 EADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMM 229
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCS 338
YGK E+A + +EM + G+ P Y+ ++ + G +D+A +F+ +R
Sbjct: 230 MIYGKTLEHEKANNLIQEMQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVE 289
Query: 339 PDICSYTTMLSAY-------------------------------VNASDMEGAEKFFRRL 367
D Y TM+ AY A +E A FR+
Sbjct: 290 IDQVLYQTMIVAYERAGLVAHAKRLLHELKSPDNIPRDTAIHILAGAGRIEEATYVFRQA 349
Query: 368 KQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDF 427
G V ++ + +I ++K ++E++DKMR G P+ + +++AYGK +
Sbjct: 350 IDAGEVKDITVFERMIHLFSKYKKYANVVEVFDKMRGLGYFPDSNVIALVLNAYGKLHEL 409
Query: 428 DSAVVWYKEMESCG 441
D A Y EM+ G
Sbjct: 410 DKANDVYMEMQEVG 423
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 86/318 (27%), Positives = 145/318 (45%), Gaps = 38/318 (11%)
Query: 200 LKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFE---TNYKEVS 256
L PD+ + +I + K G ++ A M + V V Y++L+ +Y +
Sbjct: 8 LSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDYSKAI 67
Query: 257 KIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAF 316
I+ +++R+G PD+V+Y +IN +GKA+ EA A+ EM AGV P +Y+ LL +
Sbjct: 68 SIFSRLKRSGFMPDLVAYNAMINVFGKAKLFREARALISEMKTAGVMPNTASYSTLLTMY 127
Query: 317 AISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNV 376
+ +A +VF MR +C D+ + M+ Y + A+K F +++ G PNV
Sbjct: 128 VENKKFIEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNV 187
Query: 377 ITYGTLIKGYAKV---------------NNLEK-------MMEIYDK------------- 401
++Y TL++ Y N+E+ MM IY K
Sbjct: 188 VSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLIQE 247
Query: 402 MRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADE 461
M+ GI+PN ++TI+ +GK D A + ++++ S G DQ ++ + A
Sbjct: 248 MQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQVLYQTMIVAYERAGL 307
Query: 462 RNEANELLGNFNHPNNEP 479
A LL P+N P
Sbjct: 308 VAHAKRLLHELKSPDNIP 325
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 46/187 (24%), Positives = 84/187 (44%)
Query: 295 EEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNA 354
+EM + + P Y+ L+ F G+ D A + + M +DR D+ Y+ ++
Sbjct: 1 DEMRERALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKL 60
Query: 355 SDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIF 414
D A F RLK+ GF+P+++ Y +I + K + + +M+ G+ PN +
Sbjct: 61 CDYSKAISIFSRLKRSGFMPDLVAYNAMINVFGKAKLFREARALISEMKTAGVMPNTASY 120
Query: 415 TTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNH 474
+T++ Y +NK F A+ + EM D NI++ + EA++L
Sbjct: 121 STLLTMYVENKKFIEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRK 180
Query: 475 PNNEPGI 481
EP +
Sbjct: 181 MGIEPNV 187
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 56/244 (22%), Positives = 118/244 (48%), Gaps = 6/244 (2%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + + L+ YG F +A + M +K +VV++ ++M YG+ ++ A +
Sbjct: 186 NVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLI 245
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
+ MQ+ G P+++TY I+ ++ + K A +F L S ++ DQ ++ MI Y
Sbjct: 246 QEMQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKL---RSSGVEIDQVLYQTMIVAY 302
Query: 215 KKAGGYEKARKLFA-LMAERGVQQSTVTYNSLMSFETNYKEVSKIYDQMQRAGLQPDVVS 273
++AG A++L L + + + T + +++ +E + ++ Q AG D+
Sbjct: 303 ERAGLVAHAKRLLHELKSPDNIPRDTAIH--ILAGAGRIEEATYVFRQAIDAGEVKDITV 360
Query: 274 YALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMR 333
+ +I+ + K ++ + VF++M G P ++L+A+ +D+A V+ M+
Sbjct: 361 FERMIHLFSKYKKYANVVEVFDKMRGLGYFPDSNVIALVLNAYGKLHELDKANDVYMEMQ 420
Query: 334 RDRC 337
C
Sbjct: 421 EVGC 424
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 81/367 (22%), Positives = 154/367 (41%), Gaps = 55/367 (14%)
Query: 48 LRSERTRGQPLPKDLVLGTLVRL-----KQLKKWNVVSEVLEWLRIQSWWDFNEMDFLML 102
L SE +P TL+ + K ++ +V SE+ E I+ D + ++
Sbjct: 104 LISEMKTAGVMPNTASYSTLLTMYVENKKFIEALSVFSEMRE---IKCLLDLTTCN--IM 158
Query: 103 ITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGP 162
I YG+ G +A+K+ M K G P+VVS+ L+ YG + A +FR MQ
Sbjct: 159 IDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNI 218
Query: 163 RPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEK 222
+ +TY + M+ +Y K +EK
Sbjct: 219 EQNVVTY--------------------------------------NSMMMIYGKTLEHEK 240
Query: 223 ARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSK---IYDQMQRAGLQPDVVSYALLIN 279
A L M RG++ +++TY++++S ++ + ++ +++ +G++ D V Y +I
Sbjct: 241 ANNLIQEMQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQVLYQTMIV 300
Query: 280 AYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSP 339
AY +A A + E+ P A +IL A G +++A VF+
Sbjct: 301 AYERAGLVAHAKRLLHELKSPDNIPRDTAIHILAGA----GRIEEATYVFRQAIDAGEVK 356
Query: 340 DICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIY 399
DI + M+ + + F +++ G+ P+ ++ Y K++ L+K ++Y
Sbjct: 357 DITVFERMIHLFSKYKKYANVVEVFDKMRGLGYFPDSNVIALVLNAYGKLHELDKANDVY 416
Query: 400 DKMRVNG 406
+M+ G
Sbjct: 417 MEMQEVG 423
>gi|449508067|ref|XP_004163208.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
Length = 830
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 95/378 (25%), Positives = 178/378 (47%), Gaps = 8/378 (2%)
Query: 97 MDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRR 156
+ F +I K+G +A+ ++S + + P+ ++T+L+ + R A A+F R
Sbjct: 203 LTFNTMINILCKKGRVQEAKLIMSHIFRYDAYPNAFTYTSLILGHCRNHNLDLAFAMFDR 262
Query: 157 MQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEE-KSPLKPDQKMFHMMIYMYK 215
M G P+++TY ++ + +EA M +L+E + ++P + + +
Sbjct: 263 MVKDGCDPNSVTYSTLINGLCSEGRLEEA----MDMLEEMVQKGIEPTVYTYTIPLVSLC 318
Query: 216 KAGGYEKARKLFALMAERGVQQSTVTYNSL---MSFETNYKEVSKIYDQMQRAGLQPDVV 272
AG +A +L M +RG + T+ +L +S + ++ +Y +M GL P V
Sbjct: 319 DAGCSSEAVELLGKMKKRGCVPNIQTFTALISGLSRDGKFEIAIGLYHKMLADGLVPTTV 378
Query: 273 SYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCM 332
+Y LIN R E A +F+ ML G P+ + YN ++ F + G + +A +F M
Sbjct: 379 TYNALINQLCVEGRFETAFTIFKWMLSHGSLPSTQTYNEIIKCFCLMGDIQKAMVIFDKM 438
Query: 333 RRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNL 392
+ SP++ +Y T++ Y ++ A + +K +G P+ TY LI G+++ L
Sbjct: 439 LKAGSSPNVITYNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTELISGFSRGGKL 498
Query: 393 EKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNIL 452
E ++ M +GI PN +T I+D Y D A+ + +M G P + N++
Sbjct: 499 EHATSLFYGMMEHGISPNHVTYTAIIDGYFNLAKVDDALALFWKMVESGNLPSSQTYNVM 558
Query: 453 LSLAKTADERNEANELLG 470
+S + +EA G
Sbjct: 559 ISGFSKTNSISEAENFCG 576
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 99/395 (25%), Positives = 179/395 (45%), Gaps = 8/395 (2%)
Query: 93 DFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEA 152
D N + + LI +G +A +L M +KG P+V ++T + + G A
Sbjct: 269 DPNSVTYSTLINGLCSEGRLEEAMDMLEEMVQKGIEPTVYTYTIPLVSLCDAGCSSEAVE 328
Query: 153 IFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIY 212
+ +M+ G P+ T+ ++ KF+ A ++ +L + L P ++ +I
Sbjct: 329 LLGKMKKRGCVPNIQTFTALISGLSRDGKFEIAIGLYHKMLADG---LVPTTVTYNALIN 385
Query: 213 MYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSK---IYDQMQRAGLQP 269
G +E A +F M G ST TYN ++ ++ K I+D+M +AG P
Sbjct: 386 QLCVEGRFETAFTIFKWMLSHGSLPSTQTYNEIIKCFCLMGDIQKAMVIFDKMLKAGSSP 445
Query: 270 DVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVF 329
+V++Y LI Y K A+ + E M G++P Y L+ F+ G ++ A ++F
Sbjct: 446 NVITYNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTELISGFSRGGKLEHATSLF 505
Query: 330 KCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKV 389
M SP+ +YT ++ Y N + ++ A F ++ + G +P+ TY +I G++K
Sbjct: 506 YGMMEHGISPNHVTYTAIIDGYFNLAKVDDALALFWKMVESGNLPSSQTYNVMISGFSKT 565
Query: 390 NNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKA- 448
N++ + KM G+ PN +T+ +D +N A + EME + P+
Sbjct: 566 NSISEAENFCGKMVKQGLLPNVITYTSFIDGLCRNGRTGLAFKIFHEMEKRNYFPNLYTY 625
Query: 449 KNILLSLAKTA-DERNEANELLGNFNHPNNEPGIN 482
+++ L + E E LL H EP ++
Sbjct: 626 SSLIYGLCQEGRAEDAEMYNLLARLTHYGCEPNVD 660
Score = 136 bits (342), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 99/388 (25%), Positives = 173/388 (44%), Gaps = 43/388 (11%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N F LI+ + G F A + M G P+ V++ AL+ GR++ A IF
Sbjct: 341 NIQTFTALISGLSRDGKFEIAIGLYHKMLADGLVPTTVTYNALINQLCVEGRFETAFTIF 400
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
+ M S G PS TY I+K F ++A +F +L SP + ++ +IY Y
Sbjct: 401 KWMLSHGSLPSTQTYNEIIKCFCLMGDIQKAMVIFDKMLKAGSSP---NVITYNTLIYGY 457
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSLMS-FETNYK--EVSKIYDQMQRAGLQPDV 271
K G A +L +M G++ TY L+S F K + ++ M G+ P+
Sbjct: 458 CKQGNLNNAMRLLEIMKGNGLKPDAWTYTELISGFSRGGKLEHATSLFYGMMEHGISPNH 517
Query: 272 VSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFA-------------- 317
V+Y +I+ Y + ++ALA+F +M+++G P+ + YN+++ F+
Sbjct: 518 VTYTAIIDGYFNLAKVDDALALFWKMVESGNLPSSQTYNVMISGFSKTNSISEAENFCGK 577
Query: 318 ----------------ISGMVDQART-----VFKCMRRDRCSPDICSYTTMLSAYVNASD 356
I G+ RT +F M + P++ +Y++++
Sbjct: 578 MVKQGLLPNVITYTSFIDGLCRNGRTGLAFKIFHEMEKRNYFPNLYTYSSLIYGLCQEGR 637
Query: 357 MEGAEKF--FRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIF 414
E AE + RL G PNV TY TL+KG + ++ M+ G++P++ I+
Sbjct: 638 AEDAEMYNLLARLTHYGCEPNVDTYTTLVKGLCGEGRCYEADQLVVSMQKKGLQPSEEIY 697
Query: 415 TTIMDAYGKNKDFDSAVVWYKEMESCGF 442
++ KN +SA+ + M++ GF
Sbjct: 698 RALLIGECKNLKVESALNIFYSMDTLGF 725
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 86/383 (22%), Positives = 170/383 (44%), Gaps = 36/383 (9%)
Query: 100 LMLITAYGKQGDFNKAEKVLSFMNKK-GYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQ 158
+++I + +G+ + + LS +N K + ++ S T L+ G+ A ++ +M
Sbjct: 135 ILMIKSCRNEGEVKRVTQFLSEINSKYDFGYTLCSFTTLLIQLGKFDMVDLARDMYIKML 194
Query: 159 SSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSP------------------- 199
+SG RPS LT+ ++ + + + +EA+ + + + P
Sbjct: 195 NSGIRPSLLTFNTMINILCKKGRVQEAKLIMSHIFRYDAYPNAFTYTSLILGHCRNHNLD 254
Query: 200 -------------LKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYN-SL 245
P+ + +I G E+A + M ++G++ + TY L
Sbjct: 255 LAFAMFDRMVKDGCDPNSVTYSTLINGLCSEGRLEEAMDMLEEMVQKGIEPTVYTYTIPL 314
Query: 246 MSF--ETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVR 303
+S E ++ +M++ G P++ ++ LI+ + + E A+ ++ +ML G+
Sbjct: 315 VSLCDAGCSSEAVELLGKMKKRGCVPNIQTFTALISGLSRDGKFEIAIGLYHKMLADGLV 374
Query: 304 PTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKF 363
PT YN L++ + G + A T+FK M P +Y ++ + D++ A
Sbjct: 375 PTTVTYNALINQLCVEGRFETAFTIFKWMLSHGSLPSTQTYNEIIKCFCLMGDIQKAMVI 434
Query: 364 FRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGK 423
F ++ + G PNVITY TLI GY K NL M + + M+ NG+KP+ +T ++ + +
Sbjct: 435 FDKMLKAGSSPNVITYNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTELISGFSR 494
Query: 424 NKDFDSAVVWYKEMESCGFPPDQ 446
+ A + M G P+
Sbjct: 495 GGKLEHATSLFYGMMEHGISPNH 517
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 83/357 (23%), Positives = 152/357 (42%), Gaps = 8/357 (2%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
+I + GD KA + M K G +P+V+++ L+ Y + G NA + M+ +G
Sbjct: 418 IIKCFCLMGDIQKAMVIFDKMLKAGSSPNVITYNTLIYGYCKQGNLNNAMRLLEIMKGNG 477
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
+P A TY ++ F K + A +F +++ SP + + +I Y +
Sbjct: 478 LKPDAWTYTELISGFSRGGKLEHATSLFYGMMEHGISP---NHVTYTAIIDGYFNLAKVD 534
Query: 222 KARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSK---IYDQMQRAGLQPDVVSYALLI 278
A LF M E G S+ TYN ++S + +S+ +M + GL P+V++Y I
Sbjct: 535 DALALFWKMVESGNLPSSQTYNVMISGFSKTNSISEAENFCGKMVKQGLLPNVITYTSFI 594
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDR-- 336
+ + R A +F EM P Y+ L+ G + A R
Sbjct: 595 DGLCRNGRTGLAFKIFHEMEKRNYFPNLYTYSSLIYGLCQEGRAEDAEMYNLLARLTHYG 654
Query: 337 CSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMM 396
C P++ +YTT++ A++ +++ G P+ Y L+ G K +E +
Sbjct: 655 CEPNVDTYTTLVKGLCGEGRCYEADQLVVSMQKKGLQPSEEIYRALLIGECKNLKVESAL 714
Query: 397 EIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILL 453
I+ M G + + + + ++ A K + A ++ M + D+ A +LL
Sbjct: 715 NIFYSMDTLGFQLHLSDYKALICALCKENFIEEAQCIFQTMLEKHWNSDEVAWTVLL 771
Score = 85.1 bits (209), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 76/350 (21%), Positives = 140/350 (40%), Gaps = 42/350 (12%)
Query: 92 WDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAE 151
W + E LI+ + + G A + M + G +P+ V++TA+++ Y + +A
Sbjct: 483 WTYTE-----LISGFSRGGKLEHATSLFYGMMEHGISPNHVTYTAIIDGYFNLAKVDDAL 537
Query: 152 AIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEE------------------------ 187
A+F +M SG PS+ TY +++ F + N EAE
Sbjct: 538 ALFWKMVESGNLPSSQTYNVMISGFSKTNSISEAENFCGKMVKQGLLPNVITYTSFIDGL 597
Query: 188 --------VFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKAR--KLFALMAERGVQQ 237
F + EK P+ + +IY + G E A L A + G +
Sbjct: 598 CRNGRTGLAFKIFHEMEKRNYFPNLYTYSSLIYGLCQEGRAEDAEMYNLLARLTHYGCEP 657
Query: 238 STVTYNSL---MSFETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVF 294
+ TY +L + E E ++ MQ+ GLQP Y L+ K + E AL +F
Sbjct: 658 NVDTYTTLVKGLCGEGRCYEADQLVVSMQKKGLQPSEEIYRALLIGECKNLKVESALNIF 717
Query: 295 EEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNA 354
M G + Y L+ A +++A+ +F+ M + D ++T +L +
Sbjct: 718 YSMDTLGFQLHLSDYKALICALCKENFIEEAQCIFQTMLEKHWNSDEVAWTVLLDGLLKE 777
Query: 355 SDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRV 404
+ + K ++ N TY L + + ++ K+ +I ++ +
Sbjct: 778 GETDLCLKLLHVMESRNCTLNFQTYVMLARELSALDCAIKIPQISQQLGI 827
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/220 (23%), Positives = 96/220 (43%), Gaps = 9/220 (4%)
Query: 244 SLMSFETNYKEVSK---------IYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVF 294
+L SF T ++ K +Y +M +G++P ++++ +IN K R +EA +
Sbjct: 166 TLCSFTTLLIQLGKFDMVDLARDMYIKMLNSGIRPSLLTFNTMINILCKKGRVQEAKLIM 225
Query: 295 EEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNA 354
+ P Y L+ + +D A +F M +D C P+ +Y+T+++ +
Sbjct: 226 SHIFRYDAYPNAFTYTSLILGHCRNHNLDLAFAMFDRMVKDGCDPNSVTYSTLINGLCSE 285
Query: 355 SDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIF 414
+E A + Q G P V TY + + +E+ KM+ G PN F
Sbjct: 286 GRLEEAMDMLEEMVQKGIEPTVYTYTIPLVSLCDAGCSSEAVELLGKMKKRGCVPNIQTF 345
Query: 415 TTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLS 454
T ++ ++ F+ A+ Y +M + G P N L++
Sbjct: 346 TALISGLSRDGKFEIAIGLYHKMLADGLVPTTVTYNALIN 385
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/277 (23%), Positives = 121/277 (43%), Gaps = 5/277 (1%)
Query: 83 LEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYG 142
L W ++S + + ++I+ + K ++AE M K+G P+V+++T+ ++
Sbjct: 539 LFWKMVESGNLPSSQTYNVMISGFSKTNSISEAENFCGKMVKQGLLPNVITYTSFIDGLC 598
Query: 143 RGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKP 202
R GR A IF M+ P+ TY ++ + + ++A E++ L +P
Sbjct: 599 RNGRTGLAFKIFHEMEKRNYFPNLYTYSSLIYGLCQEGRAEDA-EMYNLLARLTHYGCEP 657
Query: 203 DQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSK---IY 259
+ + ++ G +A +L M ++G+Q S Y +L+ E +V I+
Sbjct: 658 NVDTYTTLVKGLCGEGRCYEADQLVVSMQKKGLQPSEEIYRALLIGECKNLKVESALNIF 717
Query: 260 DQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAIS 319
M G Q + Y LI A K EEA +F+ ML+ A+ +LLD
Sbjct: 718 YSMDTLGFQLHLSDYKALICALCKENFIEEAQCIFQTMLEKHWNSDEVAWTVLLDGLLKE 777
Query: 320 GMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASD 356
G D + M C+ + +Y ML+ ++A D
Sbjct: 778 GETDLCLKLLHVMESRNCTLNFQTY-VMLARELSALD 813
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 54/232 (23%), Positives = 94/232 (40%), Gaps = 4/232 (1%)
Query: 282 GKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDI 341
G+ +R + L+ D G T ++ LL MVD AR ++ M P +
Sbjct: 145 GEVKRVTQFLSEINSKYDFGY--TLCSFTTLLIQLGKFDMVDLARDMYIKMLNSGIRPSL 202
Query: 342 CSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDK 401
++ TM++ ++ A+ + + PN TY +LI G+ + +NL+ ++D+
Sbjct: 203 LTFNTMINILCKKGRVQEAKLIMSHIFRYDAYPNAFTYTSLILGHCRNHNLDLAFAMFDR 262
Query: 402 MRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADE 461
M +G PN ++T+++ + A+ +EM G P I L A
Sbjct: 263 MVKDGCDPNSVTYSTLINGLCSEGRLEEAMDMLEEMVQKGIEPTVYTYTIPLVSLCDAGC 322
Query: 462 RNEANELLGNFNHPNNEPGINGLSISVDEEDDDDDDDEDDDDNIYHDGDGDG 513
+EA ELLG P I + + D + +YH DG
Sbjct: 323 SSEAVELLGKMKKRGCVPNIQTFTALIS--GLSRDGKFEIAIGLYHKMLADG 372
>gi|302765176|ref|XP_002966009.1| hypothetical protein SELMODRAFT_84672 [Selaginella moellendorffii]
gi|300166823|gb|EFJ33429.1| hypothetical protein SELMODRAFT_84672 [Selaginella moellendorffii]
Length = 413
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 98/387 (25%), Positives = 174/387 (44%), Gaps = 10/387 (2%)
Query: 44 AVAVLRSERTRGQPLPKDLVLGTLV--RLKQLKKWNVVSEVLEWLRIQSWWDFNEMDFLM 101
A+ + R + G P + TLV K + + ++ E L D N + L+
Sbjct: 30 ALDMFRRLKQEGSCKPNAVSFDTLVIFLCKMSRATDALAVFQEMLGAGLQADVNVCNTLI 89
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
T + G +A ++L M + V +++ LM+A G+ GR A +F MQ +G
Sbjct: 90 HCTC--RLGMLRQARRLLHHMTAHAFVLDVFTYSYLMDALGKAGRAAKALEVFSNMQKAG 147
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
P + Y +++ + K EA E+ L D + + PD + ++++I + G YE
Sbjct: 148 CMPDTVVYNVLISCLGKQGKVDEALEL---LEDMNRKGIMPDCRTYNIVIDVLSSCGRYE 204
Query: 222 KARKLFALMAERGVQQSTVTYNSLMSFETNYK---EVSKIYDQMQRAGLQPDVVSYALLI 278
KA F +M R VTYN+L++ + E ++D+MQ PD+ ++ LI
Sbjct: 205 KAYSFFGMMKRRKHSPDVVTYNTLLNGLKKLRRTDEACDLFDEMQANKCMPDLTTFGTLI 264
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCS 338
+ KA R E+AL ++ G P YN L+ F SG VD+ +F+ M C
Sbjct: 265 DTLAKAGRMEDALEQSARLVKMGHVPNSYIYNALISGFCRSGQVDKGYELFQDMIECSCF 324
Query: 339 PDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEI 398
PD +YT ++ + A + + + ++G P + TY LI+ + +E +
Sbjct: 325 PDSITYTILVLGFSRRGHTSMAMELLQEMVREGHTPALATYNVLIRSLSMAGQVEDAYTL 384
Query: 399 YDKMRVNGIKPNQTIFTTIMDAYGKNK 425
+ +M G P+ ++ + + NK
Sbjct: 385 FKEMIAKGFNPDMQTYSALPNLSTPNK 411
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 93/358 (25%), Positives = 171/358 (47%), Gaps = 7/358 (1%)
Query: 128 APSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGP-RPSALTYQIILKLFVEANKFKEAE 186
AP VV++ L+ Y + G A +FRR++ G +P+A+++ ++ + ++ +A
Sbjct: 8 APDVVAYNTLIAGYCKAGDGDRALDMFRRLKQEGSCKPNAVSFDTLVIFLCKMSRATDAL 67
Query: 187 EVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLM 246
VF +L + L+ D + + +I+ + G +AR+L M TY+ LM
Sbjct: 68 AVFQEMLG---AGLQADVNVCNTLIHCTCRLGMLRQARRLLHHMTAHAFVLDVFTYSYLM 124
Query: 247 SFETNYKEVSK---IYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVR 303
+K ++ MQ+AG PD V Y +LI+ GK + +EAL + E+M G+
Sbjct: 125 DALGKAGRAAKALEVFSNMQKAGCMPDTVVYNVLISCLGKQGKVDEALELLEDMNRKGIM 184
Query: 304 PTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKF 363
P + YNI++D + G ++A + F M+R + SPD+ +Y T+L+ + A
Sbjct: 185 PDCRTYNIVIDVLSSCGRYEKAYSFFGMMKRRKHSPDVVTYNTLLNGLKKLRRTDEACDL 244
Query: 364 FRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGK 423
F ++ + +P++ T+GTLI AK +E +E ++ G PN I+ ++ + +
Sbjct: 245 FDEMQANKCMPDLTTFGTLIDTLAKAGRMEDALEQSARLVKMGHVPNSYIYNALISGFCR 304
Query: 424 NKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGI 481
+ D +++M C PD IL+ + A ELL + P +
Sbjct: 305 SGQVDKGYELFQDMIECSCFPDSITYTILVLGFSRRGHTSMAMELLQEMVREGHTPAL 362
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 61/255 (23%), Positives = 110/255 (43%), Gaps = 4/255 (1%)
Query: 239 TVTYNSLMSFETNYKEVSKIYDQMQR----AGLQPDVVSYALLINAYGKARREEEALAVF 294
V YN+L++ + + D +R +P+ VS+ L+ K R +ALAVF
Sbjct: 11 VVAYNTLIAGYCKAGDGDRALDMFRRLKQEGSCKPNAVSFDTLVIFLCKMSRATDALAVF 70
Query: 295 EEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNA 354
+EML AG++ N L+ GM+ QAR + M D+ +Y+ ++ A A
Sbjct: 71 QEMLGAGLQADVNVCNTLIHCTCRLGMLRQARRLLHHMTAHAFVLDVFTYSYLMDALGKA 130
Query: 355 SDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIF 414
A + F +++ G +P+ + Y LI K +++ +E+ + M GI P+ +
Sbjct: 131 GRAAKALEVFSNMQKAGCMPDTVVYNVLISCLGKQGKVDEALELLEDMNRKGIMPDCRTY 190
Query: 415 TTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNH 474
++D ++ A ++ M+ PD N LL+ K +EA +L
Sbjct: 191 NIVIDVLSSCGRYEKAYSFFGMMKRRKHSPDVVTYNTLLNGLKKLRRTDEACDLFDEMQA 250
Query: 475 PNNEPGINGLSISVD 489
P + +D
Sbjct: 251 NKCMPDLTTFGTLID 265
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/189 (24%), Positives = 79/189 (41%), Gaps = 36/189 (19%)
Query: 337 CSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFV-PNVITYGTLIKGYAKVNNLEKM 395
C+PD+ +Y T+++ Y A D + A FRRLKQ+G PN +++ TL+ K++
Sbjct: 7 CAPDVVAYNTLIAGYCKAGDGDRALDMFRRLKQEGSCKPNAVSFDTLVIFLCKMSRATDA 66
Query: 396 MEIYDKMRVNGIKPNQTIFTT-----------------------------------IMDA 420
+ ++ +M G++ + + T +MDA
Sbjct: 67 LAVFQEMLGAGLQADVNVCNTLIHCTCRLGMLRQARRLLHHMTAHAFVLDVFTYSYLMDA 126
Query: 421 YGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPG 480
GK A+ + M+ G PD N+L+S + +EA ELL + N P
Sbjct: 127 LGKAGRAAKALEVFSNMQKAGCMPDTVVYNVLISCLGKQGKVDEALELLEDMNRKGIMPD 186
Query: 481 INGLSISVD 489
+I +D
Sbjct: 187 CRTYNIVID 195
>gi|255661150|gb|ACU25744.1| pentatricopeptide repeat-containing protein [Verbena montevidensis]
gi|255661152|gb|ACU25745.1| pentatricopeptide repeat-containing protein [Verbena litoralis]
Length = 426
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 96/374 (25%), Positives = 182/374 (48%), Gaps = 37/374 (9%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
LI K D++KA + S + + G+ P +V++ A++ +G+ ++ A ++ M+++G
Sbjct: 50 LIELSRKLCDYSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMKTAG 109
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
P +Y +L ++VE KF EA +F + E K L D ++MI +Y + G +
Sbjct: 110 VTPDTASYSTLLTMYVENKKFLEALSIFAEM-REIKCLL--DLTTCNIMIDVYGQLGMAK 166
Query: 222 KARKLFALMAERGVQQSTVTYNSLMSFETN---YKEVSKIYDQMQRAGLQPDVVSYALLI 278
+A KLF M + G++ + V+YN+L+ + + E ++ MQR ++ +VV+Y ++
Sbjct: 167 EADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMM 226
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCS 338
YGK E+A + +EM + G+ P Y+ ++ + G +D+A +F+ +R
Sbjct: 227 MIYGKTLEHEKANNLIQEMQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVD 286
Query: 339 PDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVP------------------------ 374
D Y TM+ AY A + A++ LK+ +P
Sbjct: 287 IDQVLYQTMIVAYERAGLVAHAKRLLHELKRPDNIPRDIAIHILAGAGRIEEATWVFRQA 346
Query: 375 -------NVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDF 427
++ + +I ++K ++E++DKMR G P+ + +++AYGK +F
Sbjct: 347 IDAGEVKDITVFERMIHLFSKYKKYGNVVEVFDKMRGLGYFPDSNVIALVLNAYGKLHEF 406
Query: 428 DSAVVWYKEMESCG 441
D A Y EM+ G
Sbjct: 407 DKANDVYMEMQEVG 420
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 84/318 (26%), Positives = 145/318 (45%), Gaps = 38/318 (11%)
Query: 200 LKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFE---TNYKEVS 256
L PD+ + +I + K G ++ A M + V V Y++L+ +Y +
Sbjct: 5 LSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDYSKAI 64
Query: 257 KIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAF 316
I+ +++R+G PD+V+Y +IN +GKA+ EA ++ EM AGV P +Y+ LL +
Sbjct: 65 SIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMKTAGVTPDTASYSTLLTMY 124
Query: 317 AISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNV 376
+ +A ++F MR +C D+ + M+ Y + A+K F +++ G PNV
Sbjct: 125 VENKKFLEALSIFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNV 184
Query: 377 ITYGTLIKGYAKV---------------NNLEK-------MMEIYDK------------- 401
++Y TL++ Y N+E+ MM IY K
Sbjct: 185 VSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLIQE 244
Query: 402 MRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADE 461
M+ GI+PN ++TI+ +GK D A + ++++ S G DQ ++ + A
Sbjct: 245 MQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVDIDQVLYQTMIVAYERAGL 304
Query: 462 RNEANELLGNFNHPNNEP 479
A LL P+N P
Sbjct: 305 VAHAKRLLHELKRPDNIP 322
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 43/181 (23%), Positives = 79/181 (43%)
Query: 301 GVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGA 360
+ P Y+ L+ F G+ D A + + M +DR D+ Y+ ++ D A
Sbjct: 4 ALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDYSKA 63
Query: 361 EKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDA 420
F RLK+ GF P+++ Y +I + K + + +M+ G+ P+ ++T++
Sbjct: 64 ISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMKTAGVTPDTASYSTLLTM 123
Query: 421 YGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPG 480
Y +NK F A+ + EM D NI++ + EA++L EP
Sbjct: 124 YVENKKFLEALSIFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPN 183
Query: 481 I 481
+
Sbjct: 184 V 184
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/244 (22%), Positives = 114/244 (46%), Gaps = 6/244 (2%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + + L+ YG F +A + M +K +VV++ ++M YG+ ++ A +
Sbjct: 183 NVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLI 242
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
+ MQ+ G P+++TY I+ ++ + K A +F L S + DQ ++ MI Y
Sbjct: 243 QEMQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKL---RSSGVDIDQVLYQTMIVAY 299
Query: 215 KKAGGYEKARKLFA-LMAERGVQQSTVTYNSLMSFETNYKEVSKIYDQMQRAGLQPDVVS 273
++AG A++L L + + + +++ +E + ++ Q AG D+
Sbjct: 300 ERAGLVAHAKRLLHELKRPDNIPRDIAIH--ILAGAGRIEEATWVFRQAIDAGEVKDITV 357
Query: 274 YALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMR 333
+ +I+ + K ++ + VF++M G P ++L+A+ D+A V+ M+
Sbjct: 358 FERMIHLFSKYKKYGNVVEVFDKMRGLGYFPDSNVIALVLNAYGKLHEFDKANDVYMEMQ 417
Query: 334 RDRC 337
C
Sbjct: 418 EVGC 421
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/123 (23%), Positives = 65/123 (52%)
Query: 333 RRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNL 392
R SPD +Y+T+++ + + A + ++++QD +++ Y LI+ K+ +
Sbjct: 1 RERALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDY 60
Query: 393 EKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNIL 452
K + I+ +++ +G P+ + +++ +GK K F A EM++ G PD + + L
Sbjct: 61 SKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMKTAGVTPDTASYSTL 120
Query: 453 LSL 455
L++
Sbjct: 121 LTM 123
>gi|302788594|ref|XP_002976066.1| hypothetical protein SELMODRAFT_53130 [Selaginella moellendorffii]
gi|300156342|gb|EFJ22971.1| hypothetical protein SELMODRAFT_53130 [Selaginella moellendorffii]
Length = 440
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 97/403 (24%), Positives = 181/403 (44%), Gaps = 14/403 (3%)
Query: 86 LRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGG 145
+R +W N + + L++ G + A+ + M K GY+P VV++ L+ + + G
Sbjct: 1 MRKHGFWP-NRITYNALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNTLLHGFCKVG 59
Query: 146 RYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQK 205
A IF G P +TY ++ F +A+K EA+ + ++ E L PD
Sbjct: 60 ELDEALKIFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSEN---LVPDVV 116
Query: 206 MFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFET----NYKEVSKIYDQ 261
++ ++ K G ++AR L+ ++G + +TY++L+S E K++
Sbjct: 117 TYNSLVNGLCKNGRVDEAR---MLIVDKGFSPNVITYSTLISGLCRELRGVSEALKLFGS 173
Query: 262 MQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGM 321
+ + G +P+V +Y +LI+ K R EA +F ++ G+ P Y + +D +G
Sbjct: 174 VLKQGYEPEVPTYNILIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGR 233
Query: 322 VDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGT 381
V+ A + K M C PD+ S+ +++ ++ AE ++ G PN I++ T
Sbjct: 234 VEDALLMLKDMDEKGCVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNT 293
Query: 382 LIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKD---FDSAVVWYKEME 438
LI G + +K M + +M G+KP + ++D K + A+ + M
Sbjct: 294 LICGQCRAGKWKKAMTTFKEMLKRGVKPTVVTYNILVDGLCKARQEGRIKEAITLFDAMI 353
Query: 439 SCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGI 481
G PD + L+ A + ++A LLG P +
Sbjct: 354 EKGRVPDVVTYSALIDGLGKAGKLDDARRLLGAMEAKGCIPNV 396
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 96/389 (24%), Positives = 187/389 (48%), Gaps = 13/389 (3%)
Query: 88 IQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRY 147
I++ + + + + L+ + K G+ ++A K+ K+G+ P VV++ AL+ + + +
Sbjct: 37 IKAGYSPDVVTYNTLLHGFCKVGELDEALKIFDGAVKRGFVPDVVTYNALINGFCKADKL 96
Query: 148 KNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMF 207
A+ I +RM S P +TY ++ + + EA M ++D+ SP + +
Sbjct: 97 DEAQRILQRMVSENLVPDVVTYNSLVNGLCKNGRVDEAR---MLIVDKGFSP---NVITY 150
Query: 208 HMMIY-MYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSF---ETNYKEVSKIYDQMQ 263
+I + ++ G +A KLF + ++G + TYN L+ E E +++ +
Sbjct: 151 STLISGLCRELRGVSEALKLFGSVLKQGYEPEVPTYNILIDGLLKEDRVNEAFELFSGLV 210
Query: 264 RAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVD 323
+ GL+PD ++Y + I+ KA R E+AL + ++M + G P ++N +++ VD
Sbjct: 211 KHGLEPDAITYTVFIDGLCKAGRVEDALLMLKDMDEKGCVPDVVSHNAVINGLCKEKRVD 270
Query: 324 QARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLI 383
+A + M CSP+ S+ T++ A + A F+ + + G P V+TY L+
Sbjct: 271 EAEVLLSGMEAKGCSPNAISFNTLICGQCRAGKWKKAMTTFKEMLKRGVKPTVVTYNILV 330
Query: 384 KGYAKV---NNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESC 440
G K +++ + ++D M G P+ ++ ++D GK D A ME+
Sbjct: 331 DGLCKARQEGRIKEAITLFDAMIEKGRVPDVVTYSALIDGLGKAGKLDDARRLLGAMEAK 390
Query: 441 GFPPDQKAKNILLSLAKTADERNEANELL 469
G P+ N L+S ++ +EA EL
Sbjct: 391 GCIPNVYTYNSLISGLCGLEKVDEALELF 419
Score = 136 bits (342), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 87/326 (26%), Positives = 159/326 (48%), Gaps = 13/326 (3%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGR-YKNAEAIFRRMQSS 160
L+ K G ++A ++ KG++P+V++++ L+ R R A +F +
Sbjct: 121 LVNGLCKNGRVDEARMLIV---DKGFSPNVITYSTLISGLCRELRGVSEALKLFGSVLKQ 177
Query: 161 GPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGY 220
G P TY I++ ++ ++ EA E+F L+ K L+PD + + I KAG
Sbjct: 178 GYEPEVPTYNILIDGLLKEDRVNEAFELFSGLV---KHGLEPDAITYTVFIDGLCKAGRV 234
Query: 221 EKARKLFALMAERGVQQSTVTYNSL---MSFETNYKEVSKIYDQMQRAGLQPDVVSYALL 277
E A + M E+G V++N++ + E E + M+ G P+ +S+ L
Sbjct: 235 EDALLMLKDMDEKGCVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTL 294
Query: 278 INAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAIS---GMVDQARTVFKCMRR 334
I +A + ++A+ F+EML GV+PT YNIL+D + G + +A T+F M
Sbjct: 295 ICGQCRAGKWKKAMTTFKEMLKRGVKPTVVTYNILVDGLCKARQEGRIKEAITLFDAMIE 354
Query: 335 DRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEK 394
PD+ +Y+ ++ A ++ A + ++ G +PNV TY +LI G + +++
Sbjct: 355 KGRVPDVVTYSALIDGLGKAGKLDDARRLLGAMEAKGCIPNVYTYNSLISGLCGLEKVDE 414
Query: 395 MMEIYDKMRVNGIKPNQTIFTTIMDA 420
+E++ M G P+ + TI+ A
Sbjct: 415 ALELFVAMVEKGCVPDTITYGTIISA 440
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 72/256 (28%), Positives = 122/256 (47%), Gaps = 9/256 (3%)
Query: 101 MLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSS 160
+LI K+ N+A ++ S + K G P +++T ++ + GR ++A + + M
Sbjct: 188 ILIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDALLMLKDMDEK 247
Query: 161 GPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGY 220
G P +++ ++ + + EAE + + E P+ F+ +I +AG +
Sbjct: 248 GCVPDVVSHNAVINGLCKEKRVDEAEVLLSGM---EAKGCSPNAISFNTLICGQCRAGKW 304
Query: 221 EKARKLFALMAERGVQQSTVTYNSLMSF------ETNYKEVSKIYDQMQRAGLQPDVVSY 274
+KA F M +RGV+ + VTYN L+ E KE ++D M G PDVV+Y
Sbjct: 305 KKAMTTFKEMLKRGVKPTVVTYNILVDGLCKARQEGRIKEAITLFDAMIEKGRVPDVVTY 364
Query: 275 ALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRR 334
+ LI+ GKA + ++A + M G P YN L+ VD+A +F M
Sbjct: 365 SALIDGLGKAGKLDDARRLLGAMEAKGCIPNVYTYNSLISGLCGLEKVDEALELFVAMVE 424
Query: 335 DRCSPDICSYTTMLSA 350
C PD +Y T++SA
Sbjct: 425 KGCVPDTITYGTIISA 440
>gi|297736854|emb|CBI26055.3| unnamed protein product [Vitis vinifera]
Length = 653
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 109/437 (24%), Positives = 193/437 (44%), Gaps = 52/437 (11%)
Query: 73 LKKWNVVSEVLEWL-------RIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKK 125
L K N + E +E ++ + +N M I YG G F++A +L K
Sbjct: 65 LCKANRLDEAVELFEQLEQNRKVPCAYAYNTM-----IMGYGSAGKFDEAYGLLERQKAK 119
Query: 126 GYAPSVVSHTALMEAYGRGGRYKNAEAIFRRM---------------------------- 157
G PSV+++ ++ G+ R + A IF M
Sbjct: 120 GSIPSVIAYNCILTCLGKKRRVEEALRIFEEMKRDAVPNVPTYNILIDMLCREGKLNAAL 179
Query: 158 ------QSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMI 211
+ +G P+ LT I++ +A K +EA +F + D+ +P + F +I
Sbjct: 180 EIRDDMERAGLFPNVLTVNIMIDRLCKAQKLEEACSIFEGMDDKVCTP---NAVTFSSLI 236
Query: 212 YMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMS--FETNYKE-VSKIYDQMQRAGLQ 268
K G + A L+ M + G + Y SL+ F+ KE KIY +M G
Sbjct: 237 DGLGKCGRVDDAYSLYEKMLDCGHVPGAIVYTSLIRSFFKCGRKEDGHKIYKEMVHTGCS 296
Query: 269 PDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTV 328
PD+ ++ KA E+ A+F E+ G P ++Y+IL+ +G+ ++ +
Sbjct: 297 PDLTLINTYMDCVFKAGETEKGRALFREINAHGFIPDARSYSILIHGLVKAGLANETYEL 356
Query: 329 FKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAK 388
F M+ C D +Y ++ + + + A + +K G P V+TYG++I G AK
Sbjct: 357 FYAMKEQGCVLDTHAYNAVIDGFCKSGKVNKAYQLLEEMKVKGHPPTVVTYGSVIDGLAK 416
Query: 389 VNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKA 448
++ L++ ++++ + NGIK N ++++++D +GK D A + +E+ G P+
Sbjct: 417 IDRLDEAYMLFEEAKSNGIKLNVVVYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYT 476
Query: 449 KNILLSLAKTADERNEA 465
N LL A+E NEA
Sbjct: 477 WNCLLDALVKAEEINEA 493
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 112/472 (23%), Positives = 215/472 (45%), Gaps = 16/472 (3%)
Query: 10 MQKRRKVE----VFKDAADEA--GKKNWRRLMNQIEEVGSAVAVL--RSERTRGQPLPKD 61
+ K+R+VE +F++ +A + L++ + G A L R + R P
Sbjct: 135 LGKKRRVEEALRIFEEMKRDAVPNVPTYNILIDMLCREGKLNAALEIRDDMERAGLFPNV 194
Query: 62 LVLGTLV-RLKQLKKWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLS 120
L + ++ RL + +K + E + + N + F LI GK G + A +
Sbjct: 195 LTVNIMIDRLCKAQKLEEACSIFEGMDDKVCTP-NAVTFSSLIDGLGKCGRVDDAYSLYE 253
Query: 121 FMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEAN 180
M G+ P + +T+L+ ++ + GR ++ I++ M +G P + +A
Sbjct: 254 KMLDCGHVPGAIVYTSLIRSFFKCGRKEDGHKIYKEMVHTGCSPDLTLINTYMDCVFKAG 313
Query: 181 KFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTV 240
+ ++ +F + PD + + ++I+ KAG + +LF M E+G T
Sbjct: 314 ETEKGRALFREI---NAHGFIPDARSYSILIHGLVKAGLANETYELFYAMKEQGCVLDTH 370
Query: 241 TYNSLMSFETNYKEVSKIY---DQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEM 297
YN+++ +V+K Y ++M+ G P VV+Y +I+ K R +EA +FEE
Sbjct: 371 AYNAVIDGFCKSGKVNKAYQLLEEMKVKGHPPTVVTYGSVIDGLAKIDRLDEAYMLFEEA 430
Query: 298 LDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDM 357
G++ Y+ L+D F G +D+A + + + + +P++ ++ +L A V A ++
Sbjct: 431 KSNGIKLNVVVYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEI 490
Query: 358 EGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTI 417
A F+ +K PN ITY LI G +V K + +M+ G+KPN +TT+
Sbjct: 491 NEALICFQSMKDLKCPPNQITYSILINGLCRVRKFNKAFVFWQEMQKLGLKPNTITYTTM 550
Query: 418 MDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELL 469
+ K + A + ++ G PD + N ++ +A++ +A L
Sbjct: 551 ISGLAKAGNILEASGLFSRFKANGGIPDSASYNAMIEGLSSANKAMDAYALF 602
Score = 125 bits (314), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 87/361 (24%), Positives = 169/361 (46%), Gaps = 17/361 (4%)
Query: 122 MNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILK------- 174
M+ G+ PS L+ + + + A I + M+ RP+ Y I++
Sbjct: 1 MSLSGFGPSSNISIELVANCVKSRKLREAFDIIQTMRKFKFRPAFSAYTILIGKVGLMLL 60
Query: 175 ---LFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMA 231
+ +AN+ EA E+F L K P ++ MI Y AG +++A L
Sbjct: 61 FPWVLCKANRLDEAVELFEQLEQNRKVPC---AYAYNTMIMGYGSAGKFDEAYGLLERQK 117
Query: 232 ERGVQQSTVTYNSLMSF---ETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREE 288
+G S + YN +++ + +E +I+++M+R + P+V +Y +LI+ + +
Sbjct: 118 AKGSIPSVIAYNCILTCLGKKRRVEEALRIFEEMKRDAV-PNVPTYNILIDMLCREGKLN 176
Query: 289 EALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTML 348
AL + ++M AG+ P NI++D + +++A ++F+ M C+P+ ++++++
Sbjct: 177 AALEIRDDMERAGLFPNVLTVNIMIDRLCKAQKLEEACSIFEGMDDKVCTPNAVTFSSLI 236
Query: 349 SAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIK 408
++ A + ++ G VP I Y +LI+ + K E +IY +M G
Sbjct: 237 DGLGKCGRVDDAYSLYEKMLDCGHVPGAIVYTSLIRSFFKCGRKEDGHKIYKEMVHTGCS 296
Query: 409 PNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANEL 468
P+ T+ T MD K + + ++E+ + GF PD ++ +IL+ A NE EL
Sbjct: 297 PDLTLINTYMDCVFKAGETEKGRALFREINAHGFIPDARSYSILIHGLVKAGLANETYEL 356
Query: 469 L 469
Sbjct: 357 F 357
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 54/236 (22%), Positives = 104/236 (44%), Gaps = 1/236 (0%)
Query: 254 EVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILL 313
E ++++Q+++ P +Y +I YG A + +EA + E G P+ AYN +L
Sbjct: 73 EAVELFEQLEQNRKVPCAYAYNTMIMGYGSAGKFDEAYGLLERQKAKGSIPSVIAYNCIL 132
Query: 314 DAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFV 373
V++A +F+ M+RD P++ +Y ++ + A + +++ G
Sbjct: 133 TCLGKKRRVEEALRIFEEMKRDA-VPNVPTYNILIDMLCREGKLNAALEIRDDMERAGLF 191
Query: 374 PNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVW 433
PNV+T +I K LE+ I++ M PN F++++D GK D A
Sbjct: 192 PNVLTVNIMIDRLCKAQKLEEACSIFEGMDDKVCTPNAVTFSSLIDGLGKCGRVDDAYSL 251
Query: 434 YKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGINGLSISVD 489
Y++M CG P L+ + + +++ H P + ++ +D
Sbjct: 252 YEKMLDCGHVPGAIVYTSLIRSFFKCGRKEDGHKIYKEMVHTGCSPDLTLINTYMD 307
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 66/265 (24%), Positives = 115/265 (43%), Gaps = 41/265 (15%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSH--------------------------- 134
+I + K G NKA ++L M KG+ P+VV++
Sbjct: 375 VIDGFCKSGKVNKAYQLLEEMKVKGHPPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSNG 434
Query: 135 --------TALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAE 186
++L++ +G+ GR A I + G P+ T+ +L V+A + EA
Sbjct: 435 IKLNVVVYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEINEAL 494
Query: 187 EVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLM 246
F ++ D K P P+Q + ++I + + KA + M + G++ +T+TY +++
Sbjct: 495 ICFQSMKDL-KCP--PNQITYSILINGLCRVRKFNKAFVFWQEMQKLGLKPNTITYTTMI 551
Query: 247 SF---ETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVR 303
S N E S ++ + + G PD SY +I A + +A A+FEE G
Sbjct: 552 SGLAKAGNILEASGLFSRFKANGGIPDSASYNAMIEGLSSANKAMDAYALFEETRLKGCN 611
Query: 304 PTHKAYNILLDAFAISGMVDQARTV 328
K +LLDA + ++QA V
Sbjct: 612 IHTKTCVVLLDALHKAECLEQAAIV 636
>gi|410110065|gb|AFV61112.1| pentatricopeptide repeat-containing protein 123, partial [Aloysia
citrodora]
Length = 435
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 99/374 (26%), Positives = 181/374 (48%), Gaps = 37/374 (9%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
LI K D++KA + S + + G+ P +V++ A++ +G+ ++ A A+ M+++G
Sbjct: 57 LIELSRKLCDYSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARALISEMKTAG 116
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
P+ +Y +L ++VE KF EA VF + + E K L D ++MI +Y + G +
Sbjct: 117 VMPNTASYSTLLTMYVENKKFIEALSVF-SEMREIKCLL--DLTTCNIMIDVYGQLGMAK 173
Query: 222 KARKLFALMAERGVQQSTVTYNSLMSFETN---YKEVSKIYDQMQRAGLQPDVVSYALLI 278
+A KLF M + G++ + V+YN+L+ + + E ++ MQR ++ +VV+Y ++
Sbjct: 174 EADKLFWGMRKMGIETNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMM 233
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCS 338
YGK E+A + +EM + G+ P Y+ ++ + G +D+A +F+ +R
Sbjct: 234 MIYGKTLEHEKANNLIQEMQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVE 293
Query: 339 PDICSYTTMLSAY-------------------------------VNASDMEGAEKFFRRL 367
D Y TM+ AY A +E A FR+
Sbjct: 294 IDQVLYQTMIVAYERAGLVAHAKRLLHELKSPDNIPRDTAIHILAGAGRIEEATYVFRQA 353
Query: 368 KQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDF 427
G V ++ + +I ++K +E++DKMR G P+ + +++AYGK +
Sbjct: 354 IDAGEVKDITVFERMIHLFSKYKKYANAVEVFDKMRGLGYFPDSNVIALVLNAYGKLHEL 413
Query: 428 DSAVVWYKEMESCG 441
D A Y EM+ G
Sbjct: 414 DKANDVYMEMQEVG 427
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 86/327 (26%), Positives = 145/327 (44%), Gaps = 39/327 (11%)
Query: 192 LLDEEKS-PLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFE- 249
L DE + L PD+ + +I + K G ++ A M + V V Y++L+
Sbjct: 3 LFDEMRERALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSR 62
Query: 250 --TNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHK 307
+Y + I+ +++R+G PD+V+Y +IN +GKA+ EA A+ EM AGV P
Sbjct: 63 KLCDYSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARALISEMKTAGVMPNTA 122
Query: 308 AY-----------------------------------NILLDAFAISGMVDQARTVFKCM 332
+Y NI++D + GM +A +F M
Sbjct: 123 SYSTLLTMYVENKKFIEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGM 182
Query: 333 RRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNL 392
R+ ++ SY T+L Y +A A FR +++ NV+TY +++ Y K
Sbjct: 183 RKMGIETNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEH 242
Query: 393 EKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNIL 452
EK + +M+ GI+PN ++TI+ +GK D A + ++++ S G DQ +
Sbjct: 243 EKANNLIQEMQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQVLYQTM 302
Query: 453 LSLAKTADERNEANELLGNFNHPNNEP 479
+ + A A LL P+N P
Sbjct: 303 IVAYERAGLVAHAKRLLHELKSPDNIP 329
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/244 (23%), Positives = 119/244 (48%), Gaps = 6/244 (2%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + + L+ YG F +A + M +K +VV++ ++M YG+ ++ A +
Sbjct: 190 NVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLI 249
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
+ MQ+ G P+++TY I+ ++ + K A +F L S ++ DQ ++ MI Y
Sbjct: 250 QEMQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKL---RSSGVEIDQVLYQTMIVAY 306
Query: 215 KKAGGYEKARKLFA-LMAERGVQQSTVTYNSLMSFETNYKEVSKIYDQMQRAGLQPDVVS 273
++AG A++L L + + + T + +++ +E + ++ Q AG D+
Sbjct: 307 ERAGLVAHAKRLLHELKSPDNIPRDTAIH--ILAGAGRIEEATYVFRQAIDAGEVKDITV 364
Query: 274 YALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMR 333
+ +I+ + K ++ A+ VF++M G P ++L+A+ +D+A V+ M+
Sbjct: 365 FERMIHLFSKYKKYANAVEVFDKMRGLGYFPDSNVIALVLNAYGKLHELDKANDVYMEMQ 424
Query: 334 RDRC 337
C
Sbjct: 425 EVGC 428
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 68/313 (21%), Positives = 139/313 (44%), Gaps = 37/313 (11%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + L+T Y + F +A V S M + + + +++ YG+ G K A+ +F
Sbjct: 120 NTASYSTLLTMYVENKKFIEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLF 179
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
M+ G + ++Y +L+++ +A F EA +F + ++ ++ + ++ M+ +Y
Sbjct: 180 WGMRKMGIETNVVSYNTLLRVYGDAELFGEAIHLFRLM---QRKNIEQNVVTYNSMMMIY 236
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSK---IYDQMQRAGLQPDV 271
K +EKA L M RG++ +++TY++++S ++ + ++ +++ +G++ D
Sbjct: 237 GKTLEHEKANNLIQEMQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQ 296
Query: 272 VSYALLINAYGKAR-------------------------------REEEALAVFEEMLDA 300
V Y +I AY +A R EEA VF + +DA
Sbjct: 297 VLYQTMIVAYERAGLVAHAKRLLHELKSPDNIPRDTAIHILAGAGRIEEATYVFRQAIDA 356
Query: 301 GVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGA 360
G + ++ F+ A VF MR PD +L+AY +++ A
Sbjct: 357 GEVKDITVFERMIHLFSKYKKYANAVEVFDKMRGLGYFPDSNVIALVLNAYGKLHELDKA 416
Query: 361 EKFFRRLKQDGFV 373
+ +++ G V
Sbjct: 417 NDVYMEMQEVGCV 429
>gi|334185431|ref|NP_188439.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|322510063|sp|Q5G1S8.2|PP241_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g18110, chloroplastic; AltName: Full=Protein EMBRYO
DEFECTIVE 1270; Flags: Precursor
gi|9294066|dbj|BAB02023.1| unnamed protein product [Arabidopsis thaliana]
gi|332642528|gb|AEE76049.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 1440
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 136/545 (24%), Positives = 229/545 (42%), Gaps = 100/545 (18%)
Query: 7 RKFMQKRRKVEVFKDAADEAGKKNWRRLMNQIEEVGSAVAVLRSERTRGQPLPKDLVLGT 66
R+ ++K KV + K K+WR +++ + + L+S + L LV T
Sbjct: 106 RRRVKKMNKVALIK-------AKDWR---ERVKFLTDKILSLKSNQFVADILDARLVQMT 155
Query: 67 ------LVRLKQLKKWNVVSEVLEWLRIQSW-----------------WDFNEMDFLMLI 103
+V+ + W EV EWL ++ W W+ + +
Sbjct: 156 PTDYCFVVKSVGQESWQRALEVFEWLNLRHWHSPNARMVAAILGVLGRWNQESLAVEIFT 215
Query: 104 TA-----------------YGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEA-YGRGG 145
A Y + G F+KA++++ M ++G P ++S L+ A GG
Sbjct: 216 RAEPTVGDRVQVYNAMMGVYSRSGKFSKAQELVDAMRQRGCVPDLISFNTLINARLKSGG 275
Query: 146 RYKN-AEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQ 204
N A + +++SG RP A+TY +L + A +VF D E +PD
Sbjct: 276 LTPNLAVELLDMVRNSGLRPDAITYNTLLSACSRDSNLDGAVKVFE---DMEAHRCQPDL 332
Query: 205 KMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLM---SFETNYKEVSKIYDQ 261
++ MI +Y + G +A +LF + +G VTYNSL+ + E N ++V ++Y Q
Sbjct: 333 WTYNAMISVYGRCGLAAEAERLFMELELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQ 392
Query: 262 MQRAGL------------------------------------QPDVVSYALLINAYGKAR 285
MQ+ G PD ++Y +LI++ GKA
Sbjct: 393 MQKMGFGKDEMTYNTIIHMYGKQGQLDLALQLYKDMKGLSGRNPDAITYTVLIDSLGKAN 452
Query: 286 REEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYT 345
R EA A+ EMLD G++PT + Y+ L+ +A +G ++A F CM R PD +Y+
Sbjct: 453 RTVEAAALMSEMLDVGIKPTLQTYSALICGYAKAGKREEAEDTFSCMLRSGTKPDNLAYS 512
Query: 346 TMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMME-IYDKMRV 404
ML + ++ A +R + DG P+ Y +I G K N + + + I D +
Sbjct: 513 VMLDVLLRGNETRKAWGLYRDMISDGHTPSYTLYELMILGLMKENRSDDIQKTIRDMEEL 572
Query: 405 NGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNE 464
G+ P + I K + FD A K + G+ + +L ++ +E
Sbjct: 573 CGMNPLE-----ISSVLVKGECFDLAARQLKVAITNGYELENDTLLSILGSYSSSGRHSE 627
Query: 465 ANELL 469
A ELL
Sbjct: 628 AFELL 632
Score = 144 bits (364), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 104/403 (25%), Positives = 187/403 (46%), Gaps = 35/403 (8%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
+I AYGKQ + KAE V+ + + G P + + +LM AY + G Y+ A AIF M G
Sbjct: 758 IIEAYGKQKLWQKAESVVGNLRQSGRTPDLKTWNSLMSAYAQCGCYERARAIFNTMMRDG 817
Query: 162 PRPSALTYQIIL----------KLFVEANK-----FKEAEEVFMTLLD---------EEK 197
P P+ + I+L +L+V + FK ++ + +LD E K
Sbjct: 818 PSPTVESINILLHALCVDGRLEELYVVVEELQDMGFKISKSSILLMLDAFARAGNIFEVK 877
Query: 198 ---SPLK-----PDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFE 249
S +K P +++ MMI + K A + + M E + +NS++
Sbjct: 878 KIYSSMKAAGYLPTIRLYRMMIELLCKGKRVRDAEIMVSEMEEANFKVELAIWNSMLKMY 937
Query: 250 T---NYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTH 306
T +YK+ ++Y +++ GL+PD +Y LI Y + RR EE + ++M + G+ P
Sbjct: 938 TAIEDYKKTVQVYQRIKETGLEPDETTYNTLIIMYCRDRRPEEGYLLMQQMRNLGLDPKL 997
Query: 307 KAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRR 366
Y L+ AF ++QA +F+ + D Y TM+ ++ AEK +
Sbjct: 998 DTYKSLISAFGKQKCLEQAEQLFEELLSKGLKLDRSFYHTMMKISRDSGSDSKAEKLLQM 1057
Query: 367 LKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKD 426
+K G P + T L+ Y+ N ++ ++ ++ ++ +++++DAY ++KD
Sbjct: 1058 MKNAGIEPTLATMHLLMVSYSSSGNPQEAEKVLSNLKDTEVELTTLPYSSVIDAYLRSKD 1117
Query: 427 FDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELL 469
++S + EM+ G PD + + A + E+ E LL
Sbjct: 1118 YNSGIERLLEMKKEGLEPDHRIWTCFVRAASFSKEKIEVMLLL 1160
Score = 115 bits (287), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 77/345 (22%), Positives = 168/345 (48%), Gaps = 6/345 (1%)
Query: 101 MLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSS 160
+L+ A G + V+ + G+ S S +++A+ R G + I+ M+++
Sbjct: 827 ILLHALCVDGRLEELYVVVEELQDMGFKISKSSILLMLDAFARAGNIFEVKKIYSSMKAA 886
Query: 161 GPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGY 220
G P+ Y+++++L + + ++AE + + + E++ K + +++ M+ MY Y
Sbjct: 887 GYLPTIRLYRMMIELLCKGKRVRDAE---IMVSEMEEANFKVELAIWNSMLKMYTAIEDY 943
Query: 221 EKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSKIY---DQMQRAGLQPDVVSYALL 277
+K +++ + E G++ TYN+L+ + + Y QM+ GL P + +Y L
Sbjct: 944 KKTVQVYQRIKETGLEPDETTYNTLIIMYCRDRRPEEGYLLMQQMRNLGLDPKLDTYKSL 1003
Query: 278 INAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRC 337
I+A+GK + E+A +FEE+L G++ Y+ ++ SG +A + + M+
Sbjct: 1004 ISAFGKQKCLEQAEQLFEELLSKGLKLDRSFYHTMMKISRDSGSDSKAEKLLQMMKNAGI 1063
Query: 338 SPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMME 397
P + + ++ +Y ++ + + AEK LK + Y ++I Y + + +E
Sbjct: 1064 EPTLATMHLLMVSYSSSGNPQEAEKVLSNLKDTEVELTTLPYSSVIDAYLRSKDYNSGIE 1123
Query: 398 IYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGF 442
+M+ G++P+ I+T + A +K+ ++ K +E GF
Sbjct: 1124 RLLEMKKEGLEPDHRIWTCFVRAASFSKEKIEVMLLLKALEDIGF 1168
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 80/379 (21%), Positives = 173/379 (45%), Gaps = 7/379 (1%)
Query: 112 FNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPR-PSALTYQ 170
+ +A +V S + G S +++ Y + G + A + + ++ G + Y
Sbjct: 697 YAEASQVFSDLRLSGCEASESVCKSMVVVYCKLGFPETAHQVVNQAETKGFHFACSPMYT 756
Query: 171 IILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALM 230
I++ + + +++AE V L +S PD K ++ ++ Y + G YE+AR +F M
Sbjct: 757 DIIEAYGKQKLWQKAESVVGNL---RQSGRTPDLKTWNSLMSAYAQCGCYERARAIFNTM 813
Query: 231 AERGVQQSTVTYNSLM---SFETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARRE 287
G + + N L+ + +E+ + +++Q G + S L+++A+ +A
Sbjct: 814 MRDGPSPTVESINILLHALCVDGRLEELYVVVEELQDMGFKISKSSILLMLDAFARAGNI 873
Query: 288 EEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTM 347
E ++ M AG PT + Y ++++ V A + M ++ + +M
Sbjct: 874 FEVKKIYSSMKAAGYLPTIRLYRMMIELLCKGKRVRDAEIMVSEMEEANFKVELAIWNSM 933
Query: 348 LSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGI 407
L Y D + + ++R+K+ G P+ TY TLI Y + E+ + +MR G+
Sbjct: 934 LKMYTAIEDYKKTVQVYQRIKETGLEPDETTYNTLIIMYCRDRRPEEGYLLMQQMRNLGL 993
Query: 408 KPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANE 467
P + +++ A+GK K + A ++E+ S G D+ + ++ +++ + ++A +
Sbjct: 994 DPKLDTYKSLISAFGKQKCLEQAEQLFEELLSKGLKLDRSFYHTMMKISRDSGSDSKAEK 1053
Query: 468 LLGNFNHPNNEPGINGLSI 486
LL + EP + + +
Sbjct: 1054 LLQMMKNAGIEPTLATMHL 1072
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 84/416 (20%), Positives = 165/416 (39%), Gaps = 73/416 (17%)
Query: 112 FNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAI--FRRMQSSGPR------ 163
F+ A + L GY + +++ +Y GR+ A + F + +SG +
Sbjct: 590 FDLAARQLKVAITNGYELENDTLLSILGSYSSSGRHSEAFELLEFLKEHASGSKRLITEA 649
Query: 164 -----------------------------PSALTYQIILKLFVEANKFKEAEEVFMTL-- 192
S+ Y+ +L V + EA +VF L
Sbjct: 650 LIVLHCKVNNLSAALDEYFADPCVHGWCFGSSTMYETLLHCCVANEHYAEASQVFSDLRL 709
Query: 193 --LDEEKSPLK---------------------PDQKMFHM--------MIYMYKKAGGYE 221
+ +S K + K FH +I Y K ++
Sbjct: 710 SGCEASESVCKSMVVVYCKLGFPETAHQVVNQAETKGFHFACSPMYTDIIEAYGKQKLWQ 769
Query: 222 KARKLFALMAERGVQQSTVTYNSLMSFETN---YKEVSKIYDQMQRAGLQPDVVSYALLI 278
KA + + + G T+NSLMS Y+ I++ M R G P V S +L+
Sbjct: 770 KAESVVGNLRQSGRTPDLKTWNSLMSAYAQCGCYERARAIFNTMMRDGPSPTVESINILL 829
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCS 338
+A R EE V EE+ D G + + + ++LDAFA +G + + + ++ M+
Sbjct: 830 HALCVDGRLEELYVVVEELQDMGFKISKSSILLMLDAFARAGNIFEVKKIYSSMKAAGYL 889
Query: 339 PDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEI 398
P I Y M+ + AE +++ F + + +++K Y + + +K +++
Sbjct: 890 PTIRLYRMMIELLCKGKRVRDAEIMVSEMEEANFKVELAIWNSMLKMYTAIEDYKKTVQV 949
Query: 399 YDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLS 454
Y +++ G++P++T + T++ Y +++ + + ++M + G P L+S
Sbjct: 950 YQRIKETGLEPDETTYNTLIIMYCRDRRPEEGYLLMQQMRNLGLDPKLDTYKSLIS 1005
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 76/394 (19%), Positives = 149/394 (37%), Gaps = 48/394 (12%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
LI Y K G +AE S M + G P ++++ +++ RG + A ++R M S G
Sbjct: 479 LICGYAKAGKREEAEDTFSCMLRSGTKPDNLAYSVMLDVLLRGNETRKAWGLYRDMISDG 538
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEK----SPLKPDQKMFH--------- 208
PS Y++++ ++ N+ ++++ T+ D E+ +PL+ +
Sbjct: 539 HTPSYTLYELMILGLMKENR---SDDIQKTIRDMEELCGMNPLEISSVLVKGECFDLAAR 595
Query: 209 ------------------MMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFET 250
++ Y +G + +A +L + E + +L+
Sbjct: 596 QLKVAITNGYELENDTLLSILGSYSSSGRHSEAFELLEFLKEHASGSKRLITEALIVLHC 655
Query: 251 NYKEVSKIYDQ-----MQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPT 305
+S D+ Y L++ EA VF ++ +G +
Sbjct: 656 KVNNLSAALDEYFADPCVHGWCFGSSTMYETLLHCCVANEHYAEASQVFSDLRLSGCEAS 715
Query: 306 HKAYNILLDAFAISGMVDQARTVFKCMRRD----RCSPDICSYTTMLSAYVNASDMEGAE 361
++ + G + A V CSP YT ++ AY + AE
Sbjct: 716 ESVCKSMVVVYCKLGFPETAHQVVNQAETKGFHFACSP---MYTDIIEAYGKQKLWQKAE 772
Query: 362 KFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAY 421
L+Q G P++ T+ +L+ YA+ E+ I++ M +G P ++ A
Sbjct: 773 SVVGNLRQSGRTPDLKTWNSLMSAYAQCGCYERARAIFNTMMRDGPSPTVESINILLHAL 832
Query: 422 GKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSL 455
+ + V +E++ GF + + ILL L
Sbjct: 833 CVDGRLEELYVVVEELQDMGFKISKSS--ILLML 864
>gi|359487666|ref|XP_002277942.2| PREDICTED: pentatricopeptide repeat-containing protein
At1g09820-like [Vitis vinifera]
Length = 609
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 101/389 (25%), Positives = 187/389 (48%), Gaps = 7/389 (1%)
Query: 67 LVRLKQLKKWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKG 126
LV L + + VV V + + I+ N + F ++I K G F KA V+ M G
Sbjct: 201 LVSLVKEGRIGVVESVYKEM-IRRRIGVNVVTFDVVINGLCKVGKFQKAGDVVEDMKAWG 259
Query: 127 YAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAE 186
++PSV+++ +++ Y + G+ A+A+ + M + P+ +T+ I++ F A+
Sbjct: 260 FSPSVITYNTIIDGYCKAGKMFKADALLKEMVAKRIHPNEITFNILIDGFCRDENVTAAK 319
Query: 187 EVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLM 246
+VF + ++ L+P+ ++ +I G ++A L M+ G++ + VTYN+L+
Sbjct: 320 KVFEEM---QRQGLQPNVVTYNSLINGLCSNGKLDEALGLQDKMSGMGLKPNVVTYNALI 376
Query: 247 SF---ETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVR 303
+ + KE ++ D + + GL P+V+++ LI+AYGKA R ++A + MLD GV
Sbjct: 377 NGFCKKKMLKEAREMLDDIGKRGLAPNVITFNTLIDAYGKAGRMDDAFLLRSMMLDTGVC 436
Query: 304 PTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKF 363
P YN L+ F G V +AR + K M + D+ +Y ++ A + A +
Sbjct: 437 PNVSTYNCLIVGFCREGNVKEARKLAKEMEGNGLKADLVTYNILVDALCKKGETRKAVRL 496
Query: 364 FRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGK 423
+ + G P+ +TY LI GY + N + + M G + N + ++ +
Sbjct: 497 LDEMFEVGLNPSHLTYNALIDGYFREGNSTAALNVRTLMEKKGRRANIVTYNVLIKGFCN 556
Query: 424 NKDFDSAVVWYKEMESCGFPPDQKAKNIL 452
+ A EM G P++ +IL
Sbjct: 557 KGKLEEANRLLNEMLEKGLIPNRTTYDIL 585
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 96/369 (26%), Positives = 178/369 (48%), Gaps = 6/369 (1%)
Query: 88 IQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRY 147
+ SW N + ML+ AY K G+ + A + G+ S +S ++ + + GR
Sbjct: 151 LGSWGCANSIIVDMLVWAYVKNGEMDLALEGFDRAGDYGFRLSALSCNPMLVSLVKEGRI 210
Query: 148 KNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMF 207
E++++ M + +T+ +++ + KF++A +V + D + P +
Sbjct: 211 GVVESVYKEMIRRRIGVNVVTFDVVINGLCKVGKFQKAGDV---VEDMKAWGFSPSVITY 267
Query: 208 HMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLM---SFETNYKEVSKIYDQMQR 264
+ +I Y KAG KA L M + + + +T+N L+ + N K++++MQR
Sbjct: 268 NTIIDGYCKAGKMFKADALLKEMVAKRIHPNEITFNILIDGFCRDENVTAAKKVFEEMQR 327
Query: 265 AGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQ 324
GLQP+VV+Y LIN + +EAL + ++M G++P YN L++ F M+ +
Sbjct: 328 QGLQPNVVTYNSLINGLCSNGKLDEALGLQDKMSGMGLKPNVVTYNALINGFCKKKMLKE 387
Query: 325 ARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIK 384
AR + + + +P++ ++ T++ AY A M+ A + G PNV TY LI
Sbjct: 388 AREMLDDIGKRGLAPNVITFNTLIDAYGKAGRMDDAFLLRSMMLDTGVCPNVSTYNCLIV 447
Query: 385 GYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPP 444
G+ + N+++ ++ +M NG+K + + ++DA K + AV EM G P
Sbjct: 448 GFCREGNVKEARKLAKEMEGNGLKADLVTYNILVDALCKKGETRKAVRLLDEMFEVGLNP 507
Query: 445 DQKAKNILL 453
N L+
Sbjct: 508 SHLTYNALI 516
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 88/371 (23%), Positives = 183/371 (49%), Gaps = 6/371 (1%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
++ + K+G E V M ++ +VV+ ++ + G+++ A + M++ G
Sbjct: 200 MLVSLVKEGRIGVVESVYKEMIRRRIGVNVVTFDVVINGLCKVGKFQKAGDVVEDMKAWG 259
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
PS +TY I+ + +A K +A+ + ++ + + P++ F+++I + +
Sbjct: 260 FSPSVITYNTIIDGYCKAGKMFKADALLKEMVAKR---IHPNEITFNILIDGFCRDENVT 316
Query: 222 KARKLFALMAERGVQQSTVTYNSLMS-FETNYK--EVSKIYDQMQRAGLQPDVVSYALLI 278
A+K+F M +G+Q + VTYNSL++ +N K E + D+M GL+P+VV+Y LI
Sbjct: 317 AAKKVFEEMQRQGLQPNVVTYNSLINGLCSNGKLDEALGLQDKMSGMGLKPNVVTYNALI 376
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCS 338
N + K + +EA + +++ G+ P +N L+DA+ +G +D A + M
Sbjct: 377 NGFCKKKMLKEAREMLDDIGKRGLAPNVITFNTLIDAYGKAGRMDDAFLLRSMMLDTGVC 436
Query: 339 PDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEI 398
P++ +Y ++ + +++ A K + ++ +G +++TY L+ K K + +
Sbjct: 437 PNVSTYNCLIVGFCREGNVKEARKLAKEMEGNGLKADLVTYNILVDALCKKGETRKAVRL 496
Query: 399 YDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKT 458
D+M G+ P+ + ++D Y + + +A+ ME G + N+L+
Sbjct: 497 LDEMFEVGLNPSHLTYNALIDGYFREGNSTAALNVRTLMEKKGRRANIVTYNVLIKGFCN 556
Query: 459 ADERNEANELL 469
+ EAN LL
Sbjct: 557 KGKLEEANRLL 567
Score = 119 bits (297), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 101/433 (23%), Positives = 188/433 (43%), Gaps = 49/433 (11%)
Query: 27 GKKNWRRLMNQIEEVGSAVAVLRSERTRGQPLPKDLVLGTLVRLKQLKKWNVVSEVLEWL 86
K++W +L ++E + + + QP DL+L + Q K++ + V ++
Sbjct: 57 AKQHWSKLKTIVKETNPSSLLQHLFNSEAQP---DLIL-CYFKWTQ-KEFGAIHNVEQFC 111
Query: 87 RIQSWW----DFNEMDFLMLITAYGKQGDFNKAE--KVLSFMNKKGYAPSVVSHTALMEA 140
R+ ++N++ L+ ++ K ++ + LS + G A S++ L+ A
Sbjct: 112 RLLHLLANAKNYNKIR--ALLDSFAKNAHYSNSTIFHSLSVLGSWGCANSIIVDM-LVWA 168
Query: 141 YGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPL 200
Y + G A F R G R SAL+ +L V+ + E V+ ++ + +
Sbjct: 169 YVKNGEMDLALEGFDRAGDYGFRLSALSCNPMLVSLVKEGRIGVVESVYKEMI---RRRI 225
Query: 201 KPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSKIYD 260
+ F ++I K G ++KA + +
Sbjct: 226 GVNVVTFDVVINGLCKVGKFQKA--------------------------------GDVVE 253
Query: 261 QMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISG 320
M+ G P V++Y +I+ Y KA + +A A+ +EM+ + P +NIL+D F
Sbjct: 254 DMKAWGFSPSVITYNTIIDGYCKAGKMFKADALLKEMVAKRIHPNEITFNILIDGFCRDE 313
Query: 321 MVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYG 380
V A+ VF+ M+R P++ +Y ++++ + ++ A ++ G PNV+TY
Sbjct: 314 NVTAAKKVFEEMQRQGLQPNVVTYNSLINGLCSNGKLDEALGLQDKMSGMGLKPNVVTYN 373
Query: 381 TLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESC 440
LI G+ K L++ E+ D + G+ PN F T++DAYGK D A + M
Sbjct: 374 ALINGFCKKKMLKEAREMLDDIGKRGLAPNVITFNTLIDAYGKAGRMDDAFLLRSMMLDT 433
Query: 441 GFPPDQKAKNILL 453
G P+ N L+
Sbjct: 434 GVCPNVSTYNCLI 446
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 65/231 (28%), Positives = 115/231 (49%), Gaps = 6/231 (2%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + + LI + K+ +A ++L + K+G AP+V++ L++AYG+ GR +A +
Sbjct: 368 NVVTYNALINGFCKKKMLKEAREMLDDIGKRGLAPNVITFNTLIDAYGKAGRMDDAFLLR 427
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
M +G P+ TY ++ F KEA ++ + E + LK D +++++
Sbjct: 428 SMMLDTGVCPNVSTYNCLIVGFCREGNVKEARKLAKEM---EGNGLKADLVTYNILVDAL 484
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSLMSF---ETNYKEVSKIYDQMQRAGLQPDV 271
K G KA +L M E G+ S +TYN+L+ E N + M++ G + ++
Sbjct: 485 CKKGETRKAVRLLDEMFEVGLNPSHLTYNALIDGYFREGNSTAALNVRTLMEKKGRRANI 544
Query: 272 VSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMV 322
V+Y +LI + + EEA + EML+ G+ P Y+IL D G +
Sbjct: 545 VTYNVLIKGFCNKGKLEEANRLLNEMLEKGLIPNRTTYDILRDEMMEKGFI 595
>gi|58013026|gb|AAW62966.1| chloroplast embryo-defective 1270 [Arabidopsis thaliana]
Length = 1429
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 136/545 (24%), Positives = 229/545 (42%), Gaps = 100/545 (18%)
Query: 7 RKFMQKRRKVEVFKDAADEAGKKNWRRLMNQIEEVGSAVAVLRSERTRGQPLPKDLVLGT 66
R+ ++K KV + K K+WR +++ + + L+S + L LV T
Sbjct: 106 RRRVKKMNKVALIK-------AKDWR---ERVKFLTDKILSLKSNQFVADILDARLVQMT 155
Query: 67 ------LVRLKQLKKWNVVSEVLEWLRIQSW-----------------WDFNEMDFLMLI 103
+V+ + W EV EWL ++ W W+ + +
Sbjct: 156 PTDYCFVVKSVGQESWQRALEVFEWLNLRHWHSPNARMVAAILGVLGRWNQESLAVEIFT 215
Query: 104 TA-----------------YGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEA-YGRGG 145
A Y + G F+KA++++ M ++G P ++S L+ A GG
Sbjct: 216 RAEPTVGDRVQVYNAMMGVYSRSGKFSKAQELVDAMRQRGCVPDLISFNTLINARLKSGG 275
Query: 146 RYKN-AEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQ 204
N A + +++SG RP A+TY +L + A +VF D E +PD
Sbjct: 276 LTPNLAVELLDMVRNSGLRPDAITYNTLLSACSRDSNLDGAVKVFE---DMEAHRCQPDL 332
Query: 205 KMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLM---SFETNYKEVSKIYDQ 261
++ MI +Y + G +A +LF + +G VTYNSL+ + E N ++V ++Y Q
Sbjct: 333 WTYNAMISVYGRCGLAAEAERLFMELELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQ 392
Query: 262 MQRAGL------------------------------------QPDVVSYALLINAYGKAR 285
MQ+ G PD ++Y +LI++ GKA
Sbjct: 393 MQKMGFGKDEMTYNTIIHMYGKQGQLDLALQLYKDMKGLSGRNPDAITYTVLIDSLGKAN 452
Query: 286 REEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYT 345
R EA A+ EMLD G++PT + Y+ L+ +A +G ++A F CM R PD +Y+
Sbjct: 453 RTVEAAALMSEMLDVGIKPTLQTYSALICGYAKAGKREEAEDTFSCMLRSGTKPDNLAYS 512
Query: 346 TMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMME-IYDKMRV 404
ML + ++ A +R + DG P+ Y +I G K N + + + I D +
Sbjct: 513 VMLDVLLRGNETRKAWGLYRDMISDGHTPSYTLYELMILGLMKENRSDDIQKTIRDMEEL 572
Query: 405 NGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNE 464
G+ P + I K + FD A K + G+ + +L ++ +E
Sbjct: 573 CGMNPLE-----ISSVLVKGECFDLAARQLKVAITNGYELENDTLLSILGSYSSSGRHSE 627
Query: 465 ANELL 469
A ELL
Sbjct: 628 AFELL 632
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 104/403 (25%), Positives = 187/403 (46%), Gaps = 35/403 (8%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
+I AYGKQ + KAE V+ + + G P + + +LM AY + G Y+ A AIF M G
Sbjct: 758 IIEAYGKQKLWQKAESVVGNLRQSGRTPDLKTWNSLMSAYAQCGCYERARAIFNTMMRDG 817
Query: 162 PRPSALTYQIIL----------KLFVEANK-----FKEAEEVFMTLLD---------EEK 197
P P+ + I+L +L+V + FK ++ + +LD E K
Sbjct: 818 PSPTVESINILLHALCVDGRLEELYVVVEELQDMGFKISKSSILLMLDAFARAGNIFEVK 877
Query: 198 ---SPLK-----PDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFE 249
S +K P +++ MMI + K A + + M E + +NS++
Sbjct: 878 KIYSSMKAAGYLPTIRLYRMMIELLCKGKRVRDAEIMVSEMEEANFKVELAIWNSMLKMY 937
Query: 250 T---NYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTH 306
T +YK+ ++Y +++ GL+PD +Y LI Y + RR EE + ++M + G+ P
Sbjct: 938 TAIEDYKKTVQVYQRIKETGLEPDETTYNTLIIMYCRDRRPEEGYLLMQQMRNLGLDPKL 997
Query: 307 KAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRR 366
Y L+ AF ++QA +F+ + D Y TM+ ++ AEK +
Sbjct: 998 DTYKSLISAFGKQKCLEQAEQLFEELLSKGLKLDRSFYHTMMKISRDSGSDSKAEKLLQM 1057
Query: 367 LKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKD 426
+K G P + T L+ Y+ N ++ ++ ++ ++ +++++DAY ++KD
Sbjct: 1058 MKNAGIEPTLATMHLLMVSYSSSGNPQEAEKVLSNLKDTEVELTTLPYSSVIDAYLRSKD 1117
Query: 427 FDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELL 469
++S + EM+ G PD + + A + E+ E LL
Sbjct: 1118 YNSGIERLLEMKKEGLEPDHRIWTCFVRAASFSKEKIEVMLLL 1160
Score = 115 bits (287), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 77/345 (22%), Positives = 168/345 (48%), Gaps = 6/345 (1%)
Query: 101 MLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSS 160
+L+ A G + V+ + G+ S S +++A+ R G + I+ M+++
Sbjct: 827 ILLHALCVDGRLEELYVVVEELQDMGFKISKSSILLMLDAFARAGNIFEVKKIYSSMKAA 886
Query: 161 GPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGY 220
G P+ Y+++++L + + ++AE + + + E++ K + +++ M+ MY Y
Sbjct: 887 GYLPTIRLYRMMIELLCKGKRVRDAE---IMVSEMEEANFKVELAIWNSMLKMYTAIEDY 943
Query: 221 EKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSKIY---DQMQRAGLQPDVVSYALL 277
+K +++ + E G++ TYN+L+ + + Y QM+ GL P + +Y L
Sbjct: 944 KKTVQVYQRIKETGLEPDETTYNTLIIMYCRDRRPEEGYLLMQQMRNLGLDPKLDTYKSL 1003
Query: 278 INAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRC 337
I+A+GK + E+A +FEE+L G++ Y+ ++ SG +A + + M+
Sbjct: 1004 ISAFGKQKCLEQAEQLFEELLSKGLKLDRSFYHTMMKISRDSGSDSKAEKLLQMMKNAGI 1063
Query: 338 SPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMME 397
P + + ++ +Y ++ + + AEK LK + Y ++I Y + + +E
Sbjct: 1064 EPTLATMHLLMVSYSSSGNPQEAEKVLSNLKDTEVELTTLPYSSVIDAYLRSKDYNSGIE 1123
Query: 398 IYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGF 442
+M+ G++P+ I+T + A +K+ ++ K +E GF
Sbjct: 1124 RLLEMKKEGLEPDHRIWTCFVRAASFSKEKIEVMLLLKALEDIGF 1168
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 80/379 (21%), Positives = 173/379 (45%), Gaps = 7/379 (1%)
Query: 112 FNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPR-PSALTYQ 170
+ +A +V S + G S +++ Y + G + A + + ++ G + Y
Sbjct: 697 YAEASQVFSDLRLSGCEASESVCKSMVVVYCKLGFPETAHQVVNQAETKGFHFACSPMYT 756
Query: 171 IILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALM 230
I++ + + +++AE V L +S PD K ++ ++ Y + G YE+AR +F M
Sbjct: 757 DIIEAYGKQKLWQKAESVVGNL---RQSGRTPDLKTWNSLMSAYAQCGCYERARAIFNTM 813
Query: 231 AERGVQQSTVTYNSLM---SFETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARRE 287
G + + N L+ + +E+ + +++Q G + S L+++A+ +A
Sbjct: 814 MRDGPSPTVESINILLHALCVDGRLEELYVVVEELQDMGFKISKSSILLMLDAFARAGNI 873
Query: 288 EEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTM 347
E ++ M AG PT + Y ++++ V A + M ++ + +M
Sbjct: 874 FEVKKIYSSMKAAGYLPTIRLYRMMIELLCKGKRVRDAEIMVSEMEEANFKVELAIWNSM 933
Query: 348 LSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGI 407
L Y D + + ++R+K+ G P+ TY TLI Y + E+ + +MR G+
Sbjct: 934 LKMYTAIEDYKKTVQVYQRIKETGLEPDETTYNTLIIMYCRDRRPEEGYLLMQQMRNLGL 993
Query: 408 KPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANE 467
P + +++ A+GK K + A ++E+ S G D+ + ++ +++ + ++A +
Sbjct: 994 DPKLDTYKSLISAFGKQKCLEQAEQLFEELLSKGLKLDRSFYHTMMKISRDSGSDSKAEK 1053
Query: 468 LLGNFNHPNNEPGINGLSI 486
LL + EP + + +
Sbjct: 1054 LLQMMKNAGIEPTLATMHL 1072
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 84/416 (20%), Positives = 165/416 (39%), Gaps = 73/416 (17%)
Query: 112 FNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAI--FRRMQSSGPR------ 163
F+ A + L GY + +++ +Y GR+ A + F + +SG +
Sbjct: 590 FDLAARQLKVAITNGYELENDTLLSILGSYSSSGRHSEAFELLEFLKEHASGSKRLITEA 649
Query: 164 -----------------------------PSALTYQIILKLFVEANKFKEAEEVFMTL-- 192
S+ Y+ +L V + EA +VF L
Sbjct: 650 LIVLHCKVNNLSAALDEYFADPCVHGWCFGSSTMYETLLHCCVANEHYAEASQVFSDLRL 709
Query: 193 --LDEEKSPLK---------------------PDQKMFHM--------MIYMYKKAGGYE 221
+ +S K + K FH +I Y K ++
Sbjct: 710 SGCEASESVCKSMVVVYCKLGFPETAHQVVNQAETKGFHFACSPMYTDIIEAYGKQKLWQ 769
Query: 222 KARKLFALMAERGVQQSTVTYNSLMSFETN---YKEVSKIYDQMQRAGLQPDVVSYALLI 278
KA + + + G T+NSLMS Y+ I++ M R G P V S +L+
Sbjct: 770 KAESVVGNLRQSGRTPDLKTWNSLMSAYAQCGCYERARAIFNTMMRDGPSPTVESINILL 829
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCS 338
+A R EE V EE+ D G + + + ++LDAFA +G + + + ++ M+
Sbjct: 830 HALCVDGRLEELYVVVEELQDMGFKISKSSILLMLDAFARAGNIFEVKKIYSSMKAAGYL 889
Query: 339 PDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEI 398
P I Y M+ + AE +++ F + + +++K Y + + +K +++
Sbjct: 890 PTIRLYRMMIELLCKGKRVRDAEIMVSEMEEANFKVELAIWNSMLKMYTAIEDYKKTVQV 949
Query: 399 YDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLS 454
Y +++ G++P++T + T++ Y +++ + + ++M + G P L+S
Sbjct: 950 YQRIKETGLEPDETTYNTLIIMYCRDRRPEEGYLLMQQMRNLGLDPKLDTYKSLIS 1005
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 76/394 (19%), Positives = 149/394 (37%), Gaps = 48/394 (12%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
LI Y K G +AE S M + G P ++++ +++ RG + A ++R M S G
Sbjct: 479 LICGYAKAGKREEAEDTFSCMLRSGTKPDNLAYSVMLDVLLRGNETRKAWGLYRDMISDG 538
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEK----SPLKPDQKMFH--------- 208
PS Y++++ ++ N+ ++++ T+ D E+ +PL+ +
Sbjct: 539 HTPSYTLYELMILGLMKENR---SDDIQKTIRDMEELCGMNPLEISSVLVKGECFDLAAR 595
Query: 209 ------------------MMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFET 250
++ Y +G + +A +L + E + +L+
Sbjct: 596 QLKVAITNGYELENDTLLSILGSYSSSGRHSEAFELLEFLKEHASGSKRLITEALIVLHC 655
Query: 251 NYKEVSKIYDQ-----MQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPT 305
+S D+ Y L++ EA VF ++ +G +
Sbjct: 656 KVNNLSAALDEYFADPCVHGWCFGSSTMYETLLHCCVANEHYAEASQVFSDLRLSGCEAS 715
Query: 306 HKAYNILLDAFAISGMVDQARTVFKCMRRD----RCSPDICSYTTMLSAYVNASDMEGAE 361
++ + G + A V CSP YT ++ AY + AE
Sbjct: 716 ESVCKSMVVVYCKLGFPETAHQVVNQAETKGFHFACSP---MYTDIIEAYGKQKLWQKAE 772
Query: 362 KFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAY 421
L+Q G P++ T+ +L+ YA+ E+ I++ M +G P ++ A
Sbjct: 773 SVVGNLRQSGRTPDLKTWNSLMSAYAQCGCYERARAIFNTMMRDGPSPTVESINILLHAL 832
Query: 422 GKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSL 455
+ + V +E++ GF + + ILL L
Sbjct: 833 CVDGRLEELYVVVEELQDMGFKISKSS--ILLML 864
>gi|449462477|ref|XP_004148967.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
mitochondrial-like [Cucumis sativus]
Length = 597
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 98/376 (26%), Positives = 182/376 (48%), Gaps = 8/376 (2%)
Query: 118 VLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFV 177
V++ + ++GY P +V++T L++ R A +F RMQ G P+A+TY ++K
Sbjct: 153 VMAGILRRGYIPDIVTYTTLIKGLCMEHRISKAALLFTRMQKLGCTPNAITYGTLMKGLC 212
Query: 178 EANKFKEAEEVFMTLLDEEK---SPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERG 234
A ++ +L++ KP + ++I K ++AR LF M +G
Sbjct: 213 RTGNISIALKLHQEMLNDSSLYGINFKPVVISYSIIIDALCKDRREDEARDLFEEMKVQG 272
Query: 235 VQQSTVTYNSLMSFETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVF 294
+ + ++Y SLM ++E +++++M G+QP+VV++ +LI+ K + EA +
Sbjct: 273 MTPTVISYTSLM-----WEEAKRLFNEMVNQGVQPNVVTFNVLIDVLCKEGKVIEAKDLL 327
Query: 295 EEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNA 354
E M+ G+ P YN L++ F + G ++ AR +F M C PD+ YT +++ Y
Sbjct: 328 EVMIQRGIVPNLLTYNSLIEGFCLVGDLNSARELFVSMPSKGCEPDVICYTVLINGYCKT 387
Query: 355 SDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIF 414
S +E A K + + Q G P+V TYG L+ G + + +++ M+V GI + I+
Sbjct: 388 SKVEEAMKLYNGMLQVGKRPDVKTYGALLTGLFQGGKVGDAKKLFGVMKVYGIPGDLYIY 447
Query: 415 TTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNH 474
++ KN A+ + +++S D + N L+ A + A EL
Sbjct: 448 GIFLNGLCKNGCLFEAMELFNKLKSYNIKLDIECFNCLIDGLCKAGKLETAWELFEKLPQ 507
Query: 475 PNNEPGINGLSISVDE 490
+P + +I + E
Sbjct: 508 EELQPDVVTYNIMIHE 523
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 97/422 (22%), Positives = 194/422 (45%), Gaps = 23/422 (5%)
Query: 35 MNQIEEVGSAVAVLRSERTRGQPLPKDLVLGTLVRLKQLKKWNVVSEVLEWLRIQSW-WD 93
+ + VG +AV+ RG +P + TL++ + + L + R+Q
Sbjct: 141 LCNVNRVGEGLAVMAGILRRGY-IPDIVTYTTLIK-GLCMEHRISKAALLFTRMQKLGCT 198
Query: 94 FNEMDFLMLITAYGKQGDFNKAEKVL------SFMNKKGYAPSVVSHTALMEAYGRGGRY 147
N + + L+ + G+ + A K+ S + + P V+S++ +++A + R
Sbjct: 199 PNAITYGTLMKGLCRTGNISIALKLHQEMLNDSSLYGINFKPVVISYSIIIDALCKDRRE 258
Query: 148 KNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMF 207
A +F M+ G P+ ++Y ++ ++EA+ +F ++++ ++P+ F
Sbjct: 259 DEARDLFEEMKVQGMTPTVISYTSLM--------WEEAKRLFNEMVNQG---VQPNVVTF 307
Query: 208 HMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLM---SFETNYKEVSKIYDQMQR 264
+++I + K G +A+ L +M +RG+ + +TYNSL+ + +++ M
Sbjct: 308 NVLIDVLCKEGKVIEAKDLLEVMIQRGIVPNLLTYNSLIEGFCLVGDLNSARELFVSMPS 367
Query: 265 AGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQ 324
G +PDV+ Y +LIN Y K + EEA+ ++ ML G RP K Y LL G V
Sbjct: 368 KGCEPDVICYTVLINGYCKTSKVEEAMKLYNGMLQVGKRPDVKTYGALLTGLFQGGKVGD 427
Query: 325 ARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIK 384
A+ +F M+ D+ Y L+ + A + F +LK ++ + LI
Sbjct: 428 AKKLFGVMKVYGIPGDLYIYGIFLNGLCKNGCLFEAMELFNKLKSYNIKLDIECFNCLID 487
Query: 385 GYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPP 444
G K LE E+++K+ ++P+ + ++ + + A + +++ME G P
Sbjct: 488 GLCKAGKLETAWELFEKLPQEELQPDVVTYNIMIHEFCRGGQVVKANILFQKMEKNGCTP 547
Query: 445 DQ 446
D+
Sbjct: 548 DK 549
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 71/308 (23%), Positives = 148/308 (48%), Gaps = 35/308 (11%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + F +LI K+G +A+ +L M ++G P+++++ +L+E + G +A +F
Sbjct: 303 NVVTFNVLIDVLCKEGKVIEAKDLLEVMIQRGIVPNLLTYNSLIEGFCLVGDLNSARELF 362
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
M S G P + Y +++ + + +K +EA +++ +L K +PD K + ++
Sbjct: 363 VSMPSKGCEPDVICYTVLINGYCKTSKVEEAMKLYNGMLQVGK---RPDVKTYGALLTGL 419
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSKIYDQMQRAGLQPDVVSY 274
+ G A+KLF +M K+Y G+ D+ Y
Sbjct: 420 FQGGKVGDAKKLFGVM--------------------------KVY------GIPGDLYIY 447
Query: 275 ALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRR 334
+ +N K EA+ +F ++ ++ + +N L+D +G ++ A +F+ + +
Sbjct: 448 GIFLNGLCKNGCLFEAMELFNKLKSYNIKLDIECFNCLIDGLCKAGKLETAWELFEKLPQ 507
Query: 335 DRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEK 394
+ PD+ +Y M+ + + A F++++++G P+ ITY TLI+G+ + LEK
Sbjct: 508 EELQPDVVTYNIMIHEFCRGGQVVKANILFQKMEKNGCTPDKITYATLIRGFFESKKLEK 567
Query: 395 MMEIYDKM 402
++E+ M
Sbjct: 568 VVELLHMM 575
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/257 (23%), Positives = 116/257 (45%), Gaps = 17/257 (6%)
Query: 222 KARKLFALMAERGVQQSTVTYNSLMSFET---NYKEVSKIYDQMQRAGLQPDVVSYALLI 278
+A + F LM ++ L+S +Y +V +Y+QM+ +G+ PD + +L+
Sbjct: 79 QAFQFFHLMMYSNPTPPLSSFTHLLSGLAKIKHYSQVFYLYNQMRLSGISPDCCTLNILL 138
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCS 338
N R E LAV +L G P Y L+ + + +A +F M++ C+
Sbjct: 139 NCLCNVNRVGEGLAVMAGILRRGYIPDIVTYTTLIKGLCMEHRISKAALLFTRMQKLGCT 198
Query: 339 PDICSYTTMLSAYVNASDMEGAEKFFRRLKQDG------FVPNVITYGTLIKGYAKVNNL 392
P+ +Y T++ ++ A K + + D F P VI+Y +I K
Sbjct: 199 PNAITYGTLMKGLCRTGNISIALKLHQEMLNDSSLYGINFKPVVISYSIIIDALCKDRRE 258
Query: 393 EKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNIL 452
++ +++++M+V G+ P +T++M ++ A + EM + G P+ N+L
Sbjct: 259 DEARDLFEEMKVQGMTPTVISYTSLM--------WEEAKRLFNEMVNQGVQPNVVTFNVL 310
Query: 453 LSLAKTADERNEANELL 469
+ + + EA +LL
Sbjct: 311 IDVLCKEGKVIEAKDLL 327
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/100 (24%), Positives = 51/100 (51%)
Query: 99 FLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQ 158
F LI K G A ++ + ++ P VV++ ++ + RGG+ A +F++M+
Sbjct: 482 FNCLIDGLCKAGKLETAWELFEKLPQEELQPDVVTYNIMIHEFCRGGQVVKANILFQKME 541
Query: 159 SSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKS 198
+G P +TY +++ F E+ K ++ E+ ++ + S
Sbjct: 542 KNGCTPDKITYATLIRGFFESKKLEKVVELLHMMVQRDVS 581
>gi|357121540|ref|XP_003562477.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g32630-like [Brachypodium distachyon]
Length = 556
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 91/323 (28%), Positives = 161/323 (49%), Gaps = 6/323 (1%)
Query: 99 FLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQ 158
+ +L+ + GD +K E V M +K A V ++A++ AY RGG + A +F
Sbjct: 221 YTILVDGLSRAGDISKVEAVYDEMKRKNVAGDVYFYSAVINAYCRGGNVRRASEVFDECV 280
Query: 159 SSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAG 218
G P+ TY ++ F + + + AE M L D + + +Q +F+ MI Y + G
Sbjct: 281 GHGVEPNERTYGALINGFCKIGQIEAAE---MLLADMQLRGVGHNQIVFNTMIDGYCRHG 337
Query: 219 GYEKARKLFALMAERGVQQSTVTYNSL---MSFETNYKEVSKIYDQMQRAGLQPDVVSYA 275
EKA ++ A+M + G++ TYN+L + ++ K+ M G+ P+ VSY
Sbjct: 338 MVEKALEIKAVMEKMGIELDIYTYNTLACGLCRVNRMEDAKKLLHIMAEKGVAPNYVSYT 397
Query: 276 LLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRD 335
LI+ + K EA +F +M G RP+ YN+++D + +G + +A K M +
Sbjct: 398 TLISIHAKEGDMVEARRLFRDMEGKGSRPSVVTYNVMIDGYIKNGSIREAERFKKEMEKK 457
Query: 336 RCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKM 395
PDI +Y ++ + ++ A + F +K G PNV+ Y L+ G AK E+
Sbjct: 458 GLVPDIYTYAGLVHGHCVNGKVDVALRLFEEMKHRGTKPNVVAYTALVSGLAKEGRSEEA 517
Query: 396 MEIYDKMRVNGIKPNQTIFTTIM 418
++YD M G+ P+ T+++ ++
Sbjct: 518 FQLYDDMLAAGLTPDDTLYSVLV 540
Score = 145 bits (365), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 88/374 (23%), Positives = 173/374 (46%), Gaps = 7/374 (1%)
Query: 94 FNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAI 153
N + L+ +Y +Q + + +L M +G P+V ++T L++ R G EA+
Sbjct: 181 LNACCYNSLLDSYTRQRNDDAVAGLLKEMENRGVEPTVGTYTILVDGLSRAGDISKVEAV 240
Query: 154 FRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYM 213
+ M+ Y ++ + + A EVF + ++P+++ + +I
Sbjct: 241 YDEMKRKNVAGDVYFYSAVINAYCRGGNVRRASEVFDECVGHG---VEPNERTYGALING 297
Query: 214 YKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSK---IYDQMQRAGLQPD 270
+ K G E A L A M RGV + + +N+++ + V K I M++ G++ D
Sbjct: 298 FCKIGQIEAAEMLLADMQLRGVGHNQIVFNTMIDGYCRHGMVEKALEIKAVMEKMGIELD 357
Query: 271 VVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFK 330
+ +Y L + R E+A + M + GV P + +Y L+ A G + +AR +F+
Sbjct: 358 IYTYNTLACGLCRVNRMEDAKKLLHIMAEKGVAPNYVSYTTLISIHAKEGDMVEARRLFR 417
Query: 331 CMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVN 390
M P + +Y M+ Y+ + AE+F + +++ G VP++ TY L+ G+
Sbjct: 418 DMEGKGSRPSVVTYNVMIDGYIKNGSIREAERFKKEMEKKGLVPDIYTYAGLVHGHCVNG 477
Query: 391 NLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKN 450
++ + ++++M+ G KPN +T ++ K + A Y +M + G PD +
Sbjct: 478 KVDVALRLFEEMKHRGTKPNVVAYTALVSGLAKEGRSEEAFQLYDDMLAAGLTPDDTLYS 537
Query: 451 ILLSLAKTADERNE 464
+L+ T D R +
Sbjct: 538 VLVGSLHT-DSRKD 550
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 103/212 (48%)
Query: 258 IYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFA 317
+ D++ R G+ + Y L+++Y + R ++ + +EM + GV PT Y IL+D +
Sbjct: 170 LLDELPRHGVGLNACCYNSLLDSYTRQRNDDAVAGLLKEMENRGVEPTVGTYTILVDGLS 229
Query: 318 ISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVI 377
+G + + V+ M+R + D+ Y+ +++AY ++ A + F G PN
Sbjct: 230 RAGDISKVEAVYDEMKRKNVAGDVYFYSAVINAYCRGGNVRRASEVFDECVGHGVEPNER 289
Query: 378 TYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEM 437
TYG LI G+ K+ +E + M++ G+ NQ +F T++D Y ++ + A+ M
Sbjct: 290 TYGALINGFCKIGQIEAAEMLLADMQLRGVGHNQIVFNTMIDGYCRHGMVEKALEIKAVM 349
Query: 438 ESCGFPPDQKAKNILLSLAKTADERNEANELL 469
E G D N L + +A +LL
Sbjct: 350 EKMGIELDIYTYNTLACGLCRVNRMEDAKKLL 381
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/145 (20%), Positives = 69/145 (47%)
Query: 310 NILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQ 369
++++D F SG VD A + + R + C Y ++L +Y + + + ++
Sbjct: 152 SVVVDGFCKSGSVDDAHGLLDELPRHGVGLNACCYNSLLDSYTRQRNDDAVAGLLKEMEN 211
Query: 370 DGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDS 429
G P V TY L+ G ++ ++ K+ +YD+M+ + + ++ +++AY + +
Sbjct: 212 RGVEPTVGTYTILVDGLSRAGDISKVEAVYDEMKRKNVAGDVYFYSAVINAYCRGGNVRR 271
Query: 430 AVVWYKEMESCGFPPDQKAKNILLS 454
A + E G P+++ L++
Sbjct: 272 ASEVFDECVGHGVEPNERTYGALIN 296
>gi|413922833|gb|AFW62765.1| hypothetical protein ZEAMMB73_408366 [Zea mays]
Length = 820
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 93/347 (26%), Positives = 161/347 (46%), Gaps = 10/347 (2%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
LI A ++ D A++ LS M + G+ P + +L+ Y R + + A +F +M G
Sbjct: 135 LIRALCRRADLRHAQRYLSLMVRSGWRPDAFTFNSLILGYCRTQQLEVAHDLFCKMPFRG 194
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
A++Y +++ F EA + EA E+F + +PD ++ AG E
Sbjct: 195 FSQDAVSYAALIEGFCEAGRIDEALELF-------REMTQPDMYTHAALVKGLCDAGRGE 247
Query: 222 KARKLFALMAERGVQQSTVTYNSLMSF---ETNYKEVSKIYDQMQRAGLQPDVVSYALLI 278
+ + M E G + +T Y +L+ E +E KI ++M +GL P VV+ +++
Sbjct: 248 EGLCMLQKMKELGWRPTTRAYAALVDLWCREQKAEEAEKILNEMFDSGLMPCVVTCTIVV 307
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCS 338
NAY + R A+ VFE M G P YN ++ F +G V +A + MR
Sbjct: 308 NAYCREGRMSGAVRVFESMRFKGCEPNVWTYNAIVQGFCNAGKVYKAMALLDQMRECGVE 367
Query: 339 PDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEI 398
PD+ +Y ++ + A + R ++ +G + TY LI K +++ +
Sbjct: 368 PDVVTYNLLIRGQCIDGHIGSAFRLLRLMEGNGLAADQYTYNVLIDALCKTGKVDEACSL 427
Query: 399 YDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPD 445
+D + GI+PN F T+++ K FD A + + M S G+ PD
Sbjct: 428 FDGLEYRGIRPNSVTFNTVINGLCKAGKFDVACTFLENMISAGYAPD 474
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 91/344 (26%), Positives = 160/344 (46%), Gaps = 18/344 (5%)
Query: 153 IFRRM-QSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMI 211
+F M + + P P+ TY +++ + A+ +++L+ +S +PD F+ +I
Sbjct: 115 LFAHMYRHAPPAPTGATYNALIRALCRRADLRHAQR-YLSLM--VRSGWRPDAFTFNSLI 171
Query: 212 YMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSKIYDQMQ--RAGLQP 269
Y + E A LF M RG Q V+Y +L+ + E +I + ++ R QP
Sbjct: 172 LGYCRTQQLEVAHDLFCKMPFRGFSQDAVSYAALIE---GFCEAGRIDEALELFREMTQP 228
Query: 270 DVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVF 329
D+ ++A L+ A R EE L + ++M + G RPT +AY L+D + ++A +
Sbjct: 229 DMYTHAALVKGLCDAGRGEEGLCMLQKMKELGWRPTTRAYAALVDLWCREQKAEEAEKIL 288
Query: 330 KCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKV 389
M P + + T +++AY M GA + F ++ G PNV TY +++G+
Sbjct: 289 NEMFDSGLMPCVVTCTIVVNAYCREGRMSGAVRVFESMRFKGCEPNVWTYNAIVQGFCNA 348
Query: 390 NNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAK 449
+ K M + D+MR G++P+ + ++ + SA + ME G DQ
Sbjct: 349 GKVYKAMALLDQMRECGVEPDVVTYNLLIRGQCIDGHIGSAFRLLRLMEGNGLAADQYTY 408
Query: 450 NILL-SLAKTADERNEANELLGNFNHPNNEPG-------INGLS 485
N+L+ +L KT + +EA L + P INGL
Sbjct: 409 NVLIDALCKTG-KVDEACSLFDGLEYRGIRPNSVTFNTVINGLC 451
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 90/362 (24%), Positives = 153/362 (42%), Gaps = 43/362 (11%)
Query: 92 WDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAE 151
W + L+ + ++ +AEK+L+ M G P VV+ T ++ AY R GR A
Sbjct: 261 WRPTTRAYAALVDLWCREQKAEEAEKILNEMFDSGLMPCVVTCTIVVNAYCREGRMSGAV 320
Query: 152 AIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDE---------------- 195
+F M+ G P+ TY I++ F A K +A M LLD+
Sbjct: 321 RVFESMRFKGCEPNVWTYNAIVQGFCNAGKVYKA----MALLDQMRECGVEPDVVTYNLL 376
Query: 196 --------------------EKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGV 235
E + L DQ ++++I K G ++A LF + RG+
Sbjct: 377 IRGQCIDGHIGSAFRLLRLMEGNGLAADQYTYNVLIDALCKTGKVDEACSLFDGLEYRGI 436
Query: 236 QQSTVTYNSL---MSFETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALA 292
+ ++VT+N++ + + + M AG PD +Y+ I K + +E L
Sbjct: 437 RPNSVTFNTVINGLCKAGKFDVACTFLENMISAGYAPDTYTYSPFIENLCKTKGSQEGLF 496
Query: 293 VFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYV 352
+EML V+P+ Y I+++ A ++ M CSPD+ +YTT + AY
Sbjct: 497 FIDEMLQKDVKPSTVNYTIVINRLFNERNYGLATRIWGQMVSQGCSPDVVTYTTSVRAYC 556
Query: 353 NASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQT 412
N ++ AE +K+ + + + Y TLI G+ + ++ + I M PN
Sbjct: 557 NEGRLDEAENVVTEMKKCRTIVDAMAYNTLIDGHTSIGQTDRAVTILKHMTGVASMPNHF 616
Query: 413 IF 414
F
Sbjct: 617 TF 618
Score = 112 bits (279), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 103/465 (22%), Positives = 178/465 (38%), Gaps = 76/465 (16%)
Query: 86 LRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGG 145
L ++S W + F LI Y + A + M +G++ VS+ AL+E + G
Sbjct: 154 LMVRSGWRPDAFTFNSLILGYCRTQQLEVAHDLFCKMPFRGFSQDAVSYAALIEGFCEAG 213
Query: 146 RYKNAEAIFR-------------------------------RMQSSGPRPSALTYQIILK 174
R A +FR +M+ G RP+ Y ++
Sbjct: 214 RIDEALELFREMTQPDMYTHAALVKGLCDAGRGEEGLCMLQKMKELGWRPTTRAYAALVD 273
Query: 175 LFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERG 234
L+ K +EAE++ + D S L P +++ Y + G A ++F M +G
Sbjct: 274 LWCREQKAEEAEKILNEMFD---SGLMPCVVTCTIVVNAYCREGRMSGAVRVFESMRFKG 330
Query: 235 VQQSTVTYNSLMSFETNYKEVSK---IYDQMQRAGLQPDVVSYALLI------------- 278
+ + TYN+++ N +V K + DQM+ G++PDVV+Y LLI
Sbjct: 331 CEPNVWTYNAIVQGFCNAGKVYKAMALLDQMRECGVEPDVVTYNLLIRGQCIDGHIGSAF 390
Query: 279 ----------------------NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAF 316
+A K + +EA ++F+ + G+RP +N +++
Sbjct: 391 RLLRLMEGNGLAADQYTYNVLIDALCKTGKVDEACSLFDGLEYRGIRPNSVTFNTVINGL 450
Query: 317 AISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNV 376
+G D A T + M +PD +Y+ + + F + Q P+
Sbjct: 451 CKAGKFDVACTFLENMISAGYAPDTYTYSPFIENLCKTKGSQEGLFFIDEMLQKDVKPST 510
Query: 377 ITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKE 436
+ Y +I N I+ +M G P+ +TT + AY D A E
Sbjct: 511 VNYTIVINRLFNERNYGLATRIWGQMVSQGCSPDVVTYTTSVRAYCNEGRLDEAENVVTE 570
Query: 437 MESCGFPPDQKAKNILL----SLAKTADERNEANELLGNFNHPNN 477
M+ C D A N L+ S+ +T + G + PN+
Sbjct: 571 MKKCRTIVDAMAYNTLIDGHTSIGQTDRAVTILKHMTGVASMPNH 615
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 63/307 (20%), Positives = 119/307 (38%), Gaps = 22/307 (7%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
+ +++ ++I + ++ A ++ M +G +P VV++T + AY GR AE +
Sbjct: 509 STVNYTIVINRLFNERNYGLATRIWGQMVSQGCSPDVVTYTTSVRAYCNEGRLDEAENVV 568
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMI--- 211
M+ A+ Y ++ + A + + P+ F +++
Sbjct: 569 TEMKKCRTIVDAMAYNTLIDGHTSIGQTDRAVTILKHMTGVAS---MPNHFTFFILLRHL 625
Query: 212 -------YMYKKAGGYEK------ARKLFALMAERGVQQSTVTYNSLM---SFETNYKEV 255
++ KA K +LF LM + V S TY S++ S E EV
Sbjct: 626 LQRRLAEHVPLKATSVWKTIELADVFELFELMKKNSVPSSARTYLSILEGFSEERRLDEV 685
Query: 256 SKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDA 315
+ + M+ L + Y L+N + K R +A A+ M+ G P Y LL
Sbjct: 686 TSLVSLMKEENLPLNEDIYNALVNCFCKLRMYSDAWALLCSMIGHGFLPNLIFYQYLLSG 745
Query: 316 FAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPN 375
G D+A+ +F+ R + D + ++ ++ + L+Q P+
Sbjct: 746 LTAEGQADRAKEIFRSSRWKEYNTDEIVWKVIIDGFIRKGHADMCHDMISMLEQMKCKPS 805
Query: 376 VITYGTL 382
TY L
Sbjct: 806 DETYAML 812
Score = 59.3 bits (142), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 78/450 (17%), Positives = 170/450 (37%), Gaps = 73/450 (16%)
Query: 34 LMNQIEEVGSAVAVLR-SERTRGQPLPKDLVLGTLVRLKQLKKWNVVSEVLEWLRIQSWW 92
L++Q+ E G V+ + RGQ + D +G+ RL +L + N ++
Sbjct: 357 LLDQMRECGVEPDVVTYNLLIRGQCI--DGHIGSAFRLLRLMEGNGLAA----------- 403
Query: 93 DFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEA 152
++ + +LI A K G ++A + + +G P+ V+ ++ + G++ A
Sbjct: 404 --DQYTYNVLIDALCKTGKVDEACSLFDGLEYRGIRPNSVTFNTVINGLCKAGKFDVACT 461
Query: 153 IFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIY 212
M S+G P TY ++ K K ++E + + + +KP + ++I
Sbjct: 462 FLENMISAGYAPDTYTYSPFIE---NLCKTKGSQEGLFFIDEMLQKDVKPSTVNYTIVIN 518
Query: 213 MYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETN---YKEVSKIYDQMQRAGLQP 269
Y A +++ M +G VTY + + N E + +M++
Sbjct: 519 RLFNERNYGLATRIWGQMVSQGCSPDVVTYTTSVRAYCNEGRLDEAENVVTEMKKCRTIV 578
Query: 270 DVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTH--------------KAYNILLDA 315
D ++Y LI+ + + + A+ + + M P H A ++ L A
Sbjct: 579 DAMAYNTLIDGHTSIGQTDRAVTILKHMTGVASMPNHFTFFILLRHLLQRRLAEHVPLKA 638
Query: 316 FAISGMVDQART--VFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQD--- 370
++ ++ A +F+ M+++ +Y ++L + ++ +K++
Sbjct: 639 TSVWKTIELADVFELFELMKKNSVPSSARTYLSILEGFSEERRLDEVTSLVSLMKEENLP 698
Query: 371 --------------------------------GFVPNVITYGTLIKGYAKVNNLEKMMEI 398
GF+PN+I Y L+ G ++ EI
Sbjct: 699 LNEDIYNALVNCFCKLRMYSDAWALLCSMIGHGFLPNLIFYQYLLSGLTAEGQADRAKEI 758
Query: 399 YDKMRVNGIKPNQTIFTTIMDAYGKNKDFD 428
+ R ++ ++ I+D + + D
Sbjct: 759 FRSSRWKEYNTDEIVWKVIIDGFIRKGHAD 788
>gi|356523285|ref|XP_003530271.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g28010-like [Glycine max]
Length = 703
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 106/424 (25%), Positives = 200/424 (47%), Gaps = 6/424 (1%)
Query: 70 LKQLKKWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAP 129
L + +W SE+L+ + + + + + +L K G A KVL M +KG P
Sbjct: 265 LGRTGRWREASEMLKDMTARGVRP-DVVAYTVLADGLCKNGRAGDAIKVLDLMVQKGEEP 323
Query: 130 SVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVF 189
+++ ++ + R +A + M G +P A+TY +LK A K EA +++
Sbjct: 324 GTLTYNVVVNGLCKEDRMDDAFGVVEMMVKKGKKPDAVTYNTLLKGLCGAGKIHEAMDLW 383
Query: 190 MTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFE 249
LL EK +KPD + +I K G A ++ + M E G+Q + VTYN L+
Sbjct: 384 KLLL-SEKFHVKPDVFTCNNLIQGLCKEGRVHDAARIHSSMVEMGLQGNIVTYNFLIEGY 442
Query: 250 TNYK---EVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTH 306
+ E K++ +G P+ ++Y+++IN K + A +F +M D+G+RPT
Sbjct: 443 LAARKLIEALKLWKYAVESGFSPNSMTYSVMINGLCKMQMLSVARGLFCKMKDSGIRPTV 502
Query: 307 KAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRR 366
YN L+ + ++QAR++F+ MR + D+ S+ ++ + A D++ A++
Sbjct: 503 IDYNALMTSLCREDSLEQARSLFQEMRNVNHNVDVVSFNIIIDGTLKAGDVKSAKELLSE 562
Query: 367 LKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKD 426
+ VP+ +T+ LI ++K+ L++ M +Y+KM G P +F +++ YG +
Sbjct: 563 MFMMDLVPDAVTFSILINRFSKLGMLDEAMGLYEKMVSCGHVPGVVVFDSLLKGYGLKGE 622
Query: 427 FDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGINGLSI 486
+ + +M D K + +L+ + ++L F+ +E G +I
Sbjct: 623 TEKIISLLHQMADKDVVLDSKLTSTILACLCHMSRNLDVEKILPKFSQ-QSEHTSKGTTI 681
Query: 487 SVDE 490
E
Sbjct: 682 KCHE 685
Score = 130 bits (326), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 82/380 (21%), Positives = 173/380 (45%), Gaps = 37/380 (9%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
LI+A+ +GD ++ M ++ +P+VV+++ LM+ GR GR++ A + + M + G
Sbjct: 226 LISAFCGEGDIETGRELFDEMLRRKVSPNVVTYSCLMQGLGRTGRWREASEMLKDMTARG 285
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSP---------------------- 199
RP + Y ++ + + +A +V ++ + + P
Sbjct: 286 VRPDVVAYTVLADGLCKNGRAGDAIKVLDLMVQKGEEPGTLTYNVVVNGLCKEDRMDDAF 345
Query: 200 ----------LKPDQKMFHMMIYMYKKAGGYEKARKLFALMAER--GVQQSTVTYNSL-- 245
KPD ++ ++ AG +A L+ L+ V+ T N+L
Sbjct: 346 GVVEMMVKKGKKPDAVTYNTLLKGLCGAGKIHEAMDLWKLLLSEKFHVKPDVFTCNNLIQ 405
Query: 246 -MSFETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRP 304
+ E + ++I+ M GLQ ++V+Y LI Y AR+ EAL +++ +++G P
Sbjct: 406 GLCKEGRVHDAARIHSSMVEMGLQGNIVTYNFLIEGYLAARKLIEALKLWKYAVESGFSP 465
Query: 305 THKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFF 364
Y+++++ M+ AR +F M+ P + Y ++++ +E A F
Sbjct: 466 NSMTYSVMINGLCKMQMLSVARGLFCKMKDSGIRPTVIDYNALMTSLCREDSLEQARSLF 525
Query: 365 RRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKN 424
+ ++ +V+++ +I G K +++ E+ +M + + P+ F+ +++ + K
Sbjct: 526 QEMRNVNHNVDVVSFNIIIDGTLKAGDVKSAKELLSEMFMMDLVPDAVTFSILINRFSKL 585
Query: 425 KDFDSAVVWYKEMESCGFPP 444
D A+ Y++M SCG P
Sbjct: 586 GMLDEAMGLYEKMVSCGHVP 605
Score = 118 bits (295), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 89/380 (23%), Positives = 170/380 (44%), Gaps = 8/380 (2%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + + +LI Y K G+ + +L M ++G V +++L+ A+ G + +F
Sbjct: 184 NLVTYSVLIDCYCKSGEVGEGLGLLEEMEREGLKADVFVYSSLISAFCGEGDIETGRELF 243
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
M P+ +TY +++ +++EA E+ L D ++PD + ++
Sbjct: 244 DEMLRRKVSPNVVTYSCLMQGLGRTGRWREASEM---LKDMTARGVRPDVVAYTVLADGL 300
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSL---MSFETNYKEVSKIYDQMQRAGLQPDV 271
K G A K+ LM ++G + T+TYN + + E + + + M + G +PD
Sbjct: 301 CKNGRAGDAIKVLDLMVQKGEEPGTLTYNVVVNGLCKEDRMDDAFGVVEMMVKKGKKPDA 360
Query: 272 VSYALLINAYGKARREEEALAVFEEMLDA--GVRPTHKAYNILLDAFAISGMVDQARTVF 329
V+Y L+ A + EA+ +++ +L V+P N L+ G V A +
Sbjct: 361 VTYNTLLKGLCGAGKIHEAMDLWKLLLSEKFHVKPDVFTCNNLIQGLCKEGRVHDAARIH 420
Query: 330 KCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKV 389
M +I +Y ++ Y+ A + A K ++ + GF PN +TY +I G K+
Sbjct: 421 SSMVEMGLQGNIVTYNFLIEGYLAARKLIEALKLWKYAVESGFSPNSMTYSVMINGLCKM 480
Query: 390 NNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAK 449
L ++ KM+ +GI+P + +M + + + A ++EM + D +
Sbjct: 481 QMLSVARGLFCKMKDSGIRPTVIDYNALMTSLCREDSLEQARSLFQEMRNVNHNVDVVSF 540
Query: 450 NILLSLAKTADERNEANELL 469
NI++ A + A ELL
Sbjct: 541 NIIIDGTLKAGDVKSAKELL 560
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 74/307 (24%), Positives = 143/307 (46%), Gaps = 7/307 (2%)
Query: 115 AEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSS--GPRPSALTYQII 172
A VLS M K+G+ +V + +++ + R G+ A ++F +M+ + P +TY +
Sbjct: 96 AFSVLSLMTKRGFGVNVYNLNLVLKGFCRSGQCDKAMSLFSQMKRNYDCVVPDCVTYNTL 155
Query: 173 LKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAE 232
+ F +A + EA +F + ++ +P+ + ++I Y K+G + L M
Sbjct: 156 VNGFCKAKRLAEARVLFEAM--KKGGDCRPNLVTYSVLIDCYCKSGEVGEGLGLLEEMER 213
Query: 233 RGVQQSTVTYNSLMSF---ETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEE 289
G++ Y+SL+S E + + +++D+M R + P+VV+Y+ L+ G+ R E
Sbjct: 214 EGLKADVFVYSSLISAFCGEGDIETGRELFDEMLRRKVSPNVVTYSCLMQGLGRTGRWRE 273
Query: 290 ALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLS 349
A + ++M GVRP AY +L D +G A V M + P +Y +++
Sbjct: 274 ASEMLKDMTARGVRPDVVAYTVLADGLCKNGRAGDAIKVLDLMVQKGEEPGTLTYNVVVN 333
Query: 350 AYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKP 409
M+ A + + G P+ +TY TL+KG + + M+++ +
Sbjct: 334 GLCKEDRMDDAFGVVEMMVKKGKKPDAVTYNTLLKGLCGAGKIHEAMDLWKLLLSEKFHV 393
Query: 410 NQTIFTT 416
+FT
Sbjct: 394 KPDVFTC 400
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 79/346 (22%), Positives = 155/346 (44%), Gaps = 9/346 (2%)
Query: 129 PSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEV 188
PS + + L++ + +Y +++ +M S+ P + + + FV + A
Sbjct: 40 PSEPACSTLIDNLRKARQYDAVVSVYHKMVSALVLPRFTSLSALTESFVNTHHPSFA--- 96
Query: 189 FMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAER--GVQQSTVTYNSLM 246
F L K + ++++ + ++G +KA LF+ M V VTYN+L+
Sbjct: 97 FSVLSLMTKRGFGVNVYNLNLVLKGFCRSGQCDKAMSLFSQMKRNYDCVVPDCVTYNTLV 156
Query: 247 SFETNYKEVSK---IYDQMQRAG-LQPDVVSYALLINAYGKARREEEALAVFEEMLDAGV 302
+ K +++ +++ M++ G +P++V+Y++LI+ Y K+ E L + EEM G+
Sbjct: 157 NGFCKAKRLAEARVLFEAMKKGGDCRPNLVTYSVLIDCYCKSGEVGEGLGLLEEMEREGL 216
Query: 303 RPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEK 362
+ Y+ L+ AF G ++ R +F M R + SP++ +Y+ ++ A +
Sbjct: 217 KADVFVYSSLISAFCGEGDIETGRELFDEMLRRKVSPNVVTYSCLMQGLGRTGRWREASE 276
Query: 363 FFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYG 422
+ + G P+V+ Y L G K +++ D M G +P + +++
Sbjct: 277 MLKDMTARGVRPDVVAYTVLADGLCKNGRAGDAIKVLDLMVQKGEEPGTLTYNVVVNGLC 336
Query: 423 KNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANEL 468
K D A + M G PD N LL A + +EA +L
Sbjct: 337 KEDRMDDAFGVVEMMVKKGKKPDAVTYNTLLKGLCGAGKIHEAMDL 382
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 68/333 (20%), Positives = 144/333 (43%), Gaps = 20/333 (6%)
Query: 178 EANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQ 237
+ + +A +F +D + + P + +I +KA Y+ ++ M V
Sbjct: 17 QPHSLSDAVSLFHRTIDNDPTS-PPSEPACSTLIDNLRKARQYDAVVSVYHKMVSALVLP 75
Query: 238 STVTYNSLMSFETNYKEVS---KIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVF 294
+ ++L N S + M + G +V + L++ + ++ + ++A+++F
Sbjct: 76 RFTSLSALTESFVNTHHPSFAFSVLSLMTKRGFGVNVYNLNLVLKGFCRSGQCDKAMSLF 135
Query: 295 EEM---LDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDR-CSPDICSYTTMLSA 350
+M D V P YN L++ F + + +AR +F+ M++ C P++ +Y+ ++
Sbjct: 136 SQMKRNYDC-VVPDCVTYNTLVNGFCKAKRLAEARVLFEAMKKGGDCRPNLVTYSVLIDC 194
Query: 351 YVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPN 410
Y + ++ ++++G +V Y +LI + ++E E++D+M + PN
Sbjct: 195 YCKSGEVGEGLGLLEEMEREGLKADVFVYSSLISAFCGEGDIETGRELFDEMLRRKVSPN 254
Query: 411 QTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLG 470
++ +M G+ + A K+M + G PD A +L +A ++L
Sbjct: 255 VVTYSCLMQGLGRTGRWREASEMLKDMTARGVRPDVVAYTVLADGLCKNGRAGDAIKVLD 314
Query: 471 NFNHPNNEPG-------INGLSISVDEEDDDDD 496
EPG +NGL +ED DD
Sbjct: 315 LMVQKGEEPGTLTYNVVVNGLC----KEDRMDD 343
>gi|413937324|gb|AFW71875.1| hypothetical protein ZEAMMB73_225396 [Zea mays]
Length = 818
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 93/435 (21%), Positives = 195/435 (44%), Gaps = 40/435 (9%)
Query: 74 KKWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVS 133
++W V E+L + + +E+ F ++T+ +QG ++A +V+ M++ G +V+
Sbjct: 370 ERWKEVEELLAEMTSNNCAP-DEVTFNTIVTSLCQQGLVDRAIEVVDHMSEHGCVADIVT 428
Query: 134 HTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLL 193
++++++ GR +A + R++S G +P + Y +LK +++ AEE+ +L
Sbjct: 429 YSSILDGLCDVGRVDDAVELLSRLKSYGCKPDTIAYTTVLKGLCSTEQWERAEELMAEML 488
Query: 194 DEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSL---MSFET 250
S PD+ F+ ++ + G ++A ++ M+E G VTYN + + E+
Sbjct: 489 ---CSDCPPDEVTFNTVVASLCQKGLVDRAIRVVEQMSENGCSPDIVTYNCIIDGLCNES 545
Query: 251 NYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYN 310
+ ++ +Q G +PD+V++ L+ R E+A + M+ + P +N
Sbjct: 546 CIDDAMELLSDLQSCGCKPDIVTFNTLLKGLCGVDRWEDAEQLMANMMRSNCPPDELTFN 605
Query: 311 ILLDAFAISGMVDQARTVFKCMRRDRC--------------------------------- 337
++ + G++ QA K M + C
Sbjct: 606 TVITSLCQKGLLTQAIETLKIMAENGCVPNSSTYSIVVDALLKAGKAQAALELLSGMTNG 665
Query: 338 SPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMME 397
+PD+ +Y T++S A ME A R + +G P+ TY +L G + + ++ +
Sbjct: 666 TPDLITYNTVISNLTKAGKMEEALDLLRVMVSNGLCPDTTTYRSLAYGVCREDGTDRAVR 725
Query: 398 IYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAK 457
+ +++ G+ P+ T + ++ + +++ D A+ + M S G PD+ ILL
Sbjct: 726 MLRRVQDTGLSPDTTFYNDVLLGFCRDRRTDLAIDCFAHMVSSGCMPDESTYVILLEALA 785
Query: 458 TADERNEANELLGNF 472
+EA LL +
Sbjct: 786 YGGLLDEAKRLLASL 800
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 92/379 (24%), Positives = 174/379 (45%), Gaps = 6/379 (1%)
Query: 99 FLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQ 158
+ +L+ A K+ + +A +L M KG P +V++ L+ A G A I +
Sbjct: 289 YSILLDATCKESGYRQAMALLDEMRAKGCEPDIVTYNVLINAMCNEGDVDEALNILSNLP 348
Query: 159 SSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAG 218
S G +P A+TY +LK + ++KE EE+ + +P D+ F+ ++ + G
Sbjct: 349 SHGCKPDAVTYTPVLKSLCGSERWKEVEELLAEMTSNNCAP---DEVTFNTIVTSLCQQG 405
Query: 219 GYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSKIYDQMQRA---GLQPDVVSYA 275
++A ++ M+E G VTY+S++ + V + + R G +PD ++Y
Sbjct: 406 LVDRAIEVVDHMSEHGCVADIVTYSSILDGLCDVGRVDDAVELLSRLKSYGCKPDTIAYT 465
Query: 276 LLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRD 335
++ + E A + EML + P +N ++ + G+VD+A V + M +
Sbjct: 466 TVLKGLCSTEQWERAEELMAEMLCSDCPPDEVTFNTVVASLCQKGLVDRAIRVVEQMSEN 525
Query: 336 RCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKM 395
CSPDI +Y ++ N S ++ A + L+ G P+++T+ TL+KG V+ E
Sbjct: 526 GCSPDIVTYNCIIDGLCNESCIDDAMELLSDLQSCGCKPDIVTFNTLLKGLCGVDRWEDA 585
Query: 396 MEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSL 455
++ M + P++ F T++ + + A+ K M G P+ +I++
Sbjct: 586 EQLMANMMRSNCPPDELTFNTVITSLCQKGLLTQAIETLKIMAENGCVPNSSTYSIVVDA 645
Query: 456 AKTADERNEANELLGNFNH 474
A + A ELL +
Sbjct: 646 LLKAGKAQAALELLSGMTN 664
Score = 138 bits (348), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 88/382 (23%), Positives = 167/382 (43%), Gaps = 11/382 (2%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
++ Y + G A + +N + P + L+ A GR +A A+F M G
Sbjct: 225 MVNGYCRAGRIEDARR---LINGMPFPPDTFTFNPLIRALCVRGRIPDALAVFDDMLHRG 281
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSP-LKPDQKMFHMMIYMYKKAGGY 220
PS +TY I+L + + +++A M LLDE ++ +PD ++++I G
Sbjct: 282 CSPSVVTYSILLDATCKESGYRQA----MALLDEMRAKGCEPDIVTYNVLINAMCNEGDV 337
Query: 221 EKARKLFALMAERGVQQSTVTYNSLM---SFETNYKEVSKIYDQMQRAGLQPDVVSYALL 277
++A + + + G + VTY ++ +KEV ++ +M PD V++ +
Sbjct: 338 DEALNILSNLPSHGCKPDAVTYTPVLKSLCGSERWKEVEELLAEMTSNNCAPDEVTFNTI 397
Query: 278 INAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRC 337
+ + + + A+ V + M + G Y+ +LD G VD A + ++ C
Sbjct: 398 VTSLCQQGLVDRAIEVVDHMSEHGCVADIVTYSSILDGLCDVGRVDDAVELLSRLKSYGC 457
Query: 338 SPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMME 397
PD +YTT+L + E AE+ + P+ +T+ T++ + +++ +
Sbjct: 458 KPDTIAYTTVLKGLCSTEQWERAEELMAEMLCSDCPPDEVTFNTVVASLCQKGLVDRAIR 517
Query: 398 IYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAK 457
+ ++M NG P+ + I+D D A+ +++SCG PD N LL
Sbjct: 518 VVEQMSENGCSPDIVTYNCIIDGLCNESCIDDAMELLSDLQSCGCKPDIVTFNTLLKGLC 577
Query: 458 TADERNEANELLGNFNHPNNEP 479
D +A +L+ N N P
Sbjct: 578 GVDRWEDAEQLMANMMRSNCPP 599
Score = 121 bits (304), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 82/342 (23%), Positives = 148/342 (43%), Gaps = 18/342 (5%)
Query: 145 GRYKNAEAIFRRMQSSGPR--PSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKP 202
G A +F M S G R P + I++K + +AE VF + L P
Sbjct: 164 GEIDEALVLFDSMASGGGRNCPPVVPCNILIKRLCSDGRVSDAERVF--------AALGP 215
Query: 203 DQKM--FHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSL---MSFETNYKEVSK 257
+ ++ M+ Y +AG E AR+L M T T+N L + +
Sbjct: 216 SATVVTYNTMVNGYCRAGRIEDARRLINGMP---FPPDTFTFNPLIRALCVRGRIPDALA 272
Query: 258 IYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFA 317
++D M G P VV+Y++L++A K +A+A+ +EM G P YN+L++A
Sbjct: 273 VFDDMLHRGCSPSVVTYSILLDATCKESGYRQAMALLDEMRAKGCEPDIVTYNVLINAMC 332
Query: 318 ISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVI 377
G VD+A + + C PD +YT +L + + + E+ + + P+ +
Sbjct: 333 NEGDVDEALNILSNLPSHGCKPDAVTYTPVLKSLCGSERWKEVEELLAEMTSNNCAPDEV 392
Query: 378 TYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEM 437
T+ T++ + +++ +E+ D M +G + +++I+D D AV +
Sbjct: 393 TFNTIVTSLCQQGLVDRAIEVVDHMSEHGCVADIVTYSSILDGLCDVGRVDDAVELLSRL 452
Query: 438 ESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEP 479
+S G PD A +L + ++ A EL+ + P
Sbjct: 453 KSYGCKPDTIAYTTVLKGLCSTEQWERAEELMAEMLCSDCPP 494
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/248 (20%), Positives = 113/248 (45%), Gaps = 10/248 (4%)
Query: 59 PKDLVLGTLVR-LKQLKKWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEK 117
P + TL++ L + +W +++ + ++S +E+ F +IT+ ++G +A +
Sbjct: 564 PDIVTFNTLLKGLCGVDRWEDAEQLMANM-MRSNCPPDELTFNTVITSLCQKGLLTQAIE 622
Query: 118 VLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFV 177
L M + G P+ +++ +++A + G+ + A + M + P +TY ++
Sbjct: 623 TLKIMAENGCVPNSSTYSIVVDALLKAGKAQAALELLSGMTNG--TPDLITYNTVISNLT 680
Query: 178 EANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQ 237
+A K +EA ++ ++ L PD + + Y + G ++A ++ + + G+
Sbjct: 681 KAGKMEEALDLLRVMVSNG---LCPDTTTYRSLAYGVCREDGTDRAVRMLRRVQDTGLSP 737
Query: 238 STVTYNS-LMSFETNYKEVSKI--YDQMQRAGLQPDVVSYALLINAYGKARREEEALAVF 294
T YN L+ F + + I + M +G PD +Y +L+ A +EA +
Sbjct: 738 DTTFYNDVLLGFCRDRRTDLAIDCFAHMVSSGCMPDESTYVILLEALAYGGLLDEAKRLL 797
Query: 295 EEMLDAGV 302
+ GV
Sbjct: 798 ASLCSLGV 805
Score = 43.9 bits (102), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 48/214 (22%), Positives = 76/214 (35%), Gaps = 43/214 (20%)
Query: 288 EEALAVFEEMLDAGVR--PTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYT 345
+EAL +F+ M G R P NIL+ G V A VF + S + +Y
Sbjct: 167 DEALVLFDSMASGGGRNCPPVVPCNILIKRLCSDGRVSDAERVFAALGP---SATVVTYN 223
Query: 346 TMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVN 405
TM++ Y A +E A + + F P+ T+ LI+ + + ++D M
Sbjct: 224 TMVNGYCRAGRIEDARRLINGMP---FPPDTFTFNPLIRALCVRGRIPDALAVFDDMLHR 280
Query: 406 GIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEA 465
G P +VV Y +ILL +A
Sbjct: 281 GCSP--------------------SVVTY---------------SILLDATCKESGYRQA 305
Query: 466 NELLGNFNHPNNEPGINGLSISVDEEDDDDDDDE 499
LL EP I ++ ++ ++ D DE
Sbjct: 306 MALLDEMRAKGCEPDIVTYNVLINAMCNEGDVDE 339
>gi|410110107|gb|AFV61133.1| pentatricopeptide repeat-containing protein 123, partial [Lippia
brasiliensis]
Length = 382
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 99/374 (26%), Positives = 182/374 (48%), Gaps = 37/374 (9%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
LI K D++KA + S + + G+ P +V++ A++ +G+ ++ A ++ M+++G
Sbjct: 11 LIELSRKLCDYSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMKTAG 70
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
P+ +Y +L ++VE KF EA VF + + E K L D ++MI +Y + G +
Sbjct: 71 VMPNTTSYSTLLTMYVENKKFLEALSVF-SEMREIKCLL--DLTTCNIMIDVYGQLGMAK 127
Query: 222 KARKLFALMAERGVQQSTVTYNSLMSFETN---YKEVSKIYDQMQRAGLQPDVVSYALLI 278
+A KLF M + G++ + V+YN+L+ + + E ++ MQR ++ +VV+Y +I
Sbjct: 128 EADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMI 187
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCS 338
YGK E+A + +EM G+ P Y+ ++ + G +D+A +F+ +R
Sbjct: 188 MIYGKTLEHEKANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVE 247
Query: 339 PDICSYTTMLSAY-------------------------------VNASDMEGAEKFFRRL 367
D + TM+ AY A +E A FR+
Sbjct: 248 IDQILFQTMIVAYERAGLVAHAKRLLHELKRPDNIPRDTAIHILAGAGRIEEATYVFRQA 307
Query: 368 KQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDF 427
G V ++ + +I +K ++E++DKMR G P+ + +++AYGK ++F
Sbjct: 308 IDAGEVKDITVFERMIHLLSKYKKYXNVVEVFDKMRGLGYFPDSNVIAVVLNAYGKLQEF 367
Query: 428 DSAVVWYKEMESCG 441
D A Y EM+ G
Sbjct: 368 DKANDVYMEMQEVG 381
Score = 128 bits (322), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 77/280 (27%), Positives = 136/280 (48%), Gaps = 3/280 (1%)
Query: 203 DQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSF---ETNYKEVSKIY 259
D ++ +I + +K Y KA +F+ + G V YN++++ ++E +
Sbjct: 4 DLVLYSNLIELSRKLCDYSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLI 63
Query: 260 DQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAIS 319
+M+ AG+ P+ SY+ L+ Y + ++ EAL+VF EM + NI++D +
Sbjct: 64 SEMKTAGVMPNTTSYSTLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQL 123
Query: 320 GMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITY 379
GM +A +F MR+ P++ SY T+L Y +A A FR +++ NV+TY
Sbjct: 124 GMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTY 183
Query: 380 GTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMES 439
++I Y K EK + +M+ GI+PN ++TI+ +GK D A + ++++ S
Sbjct: 184 NSMIMIYGKTLEHEKANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRS 243
Query: 440 CGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEP 479
G DQ ++ + A A LL P+N P
Sbjct: 244 SGVEIDQILFQTMIVAYERAGLVAHAKRLLHELKRPDNIP 283
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/244 (23%), Positives = 115/244 (47%), Gaps = 6/244 (2%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + + L+ YG F +A + M +K +VV++ +++ YG+ ++ A +
Sbjct: 144 NVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMIMIYGKTLEHEKANNLI 203
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
+ MQS G P+++TY I+ ++ + K A +F L S ++ DQ +F MI Y
Sbjct: 204 QEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKL---RSSGVEIDQILFQTMIVAY 260
Query: 215 KKAGGYEKARKLFA-LMAERGVQQSTVTYNSLMSFETNYKEVSKIYDQMQRAGLQPDVVS 273
++AG A++L L + + T + +++ +E + ++ Q AG D+
Sbjct: 261 ERAGLVAHAKRLLHELKRPDNIPRDTAIH--ILAGAGRIEEATYVFRQAIDAGEVKDITV 318
Query: 274 YALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMR 333
+ +I+ K ++ + VF++M G P ++L+A+ D+A V+ M+
Sbjct: 319 FERMIHLLSKYKKYXNVVEVFDKMRGLGYFPDSNVIAVVLNAYGKLQEFDKANDVYMEMQ 378
Query: 334 RDRC 337
C
Sbjct: 379 EVGC 382
Score = 65.5 bits (158), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 35/142 (24%), Positives = 63/142 (44%)
Query: 340 DICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIY 399
D+ Y+ ++ D A F RLK+ GF P+++ Y +I + K + +
Sbjct: 4 DLVLYSNLIELSRKLCDYSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLI 63
Query: 400 DKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTA 459
+M+ G+ PN T ++T++ Y +NK F A+ + EM D NI++ +
Sbjct: 64 SEMKTAGVMPNTTSYSTLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQL 123
Query: 460 DERNEANELLGNFNHPNNEPGI 481
EA++L EP +
Sbjct: 124 GMAKEADKLFWGMRKMGIEPNV 145
>gi|359488009|ref|XP_003633686.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 579
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 106/443 (23%), Positives = 195/443 (44%), Gaps = 14/443 (3%)
Query: 54 RGQPLPKDL----VLGTLVRLKQLKKWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQ 109
R QP P + +L ++ ++K +S ++ I N +LI ++
Sbjct: 54 RMQPPPSTVDFNKLLTSIAKMKHHSTLLSLSHQMDSFGIPP----NIYTLHILINSFCHL 109
Query: 110 GDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTY 169
A VL+ + K G+ P + T L+ G+ A +F +M G RP +TY
Sbjct: 110 NRVGFAFSVLAKILKLGHQPDTATFTTLIRGIYVEGKIGEALHLFDKMIGEGFRPDVVTY 169
Query: 170 QIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFAL 229
++ + A + +++ + +P+ ++ +I K +A LF+
Sbjct: 170 GTLINGLCKVGNTSAAIRLLGSMVQKN---CQPNVFAYNTIIDSLCKDRQVTEAFNLFSE 226
Query: 230 MAERGVQQSTVTYNSLMSFETN---YKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARR 286
M +G+ TYNSL+ N +K V+ + ++M + + PDVVS+ +++A K +
Sbjct: 227 MVTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSKIMPDVVSFNTVVDALCKEGK 286
Query: 287 EEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTT 346
EA V ++M+ GV P Y L+D + +D+A VF M C P++ SY T
Sbjct: 287 VTEAHDVVDKMIQRGVEPNVVTYTALMDGHCLLSEMDEAVKVFDTMVCKGCMPNVISYNT 346
Query: 347 MLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNG 406
+++ Y ++ A F + + +P+ +TY TLI G V L+ + ++ +M
Sbjct: 347 LINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQDAIALFHEMVACS 406
Query: 407 IKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEAN 466
PN + ++D KN+ A+ K +E PD + NI + A E A
Sbjct: 407 QIPNLVTYRILLDYLCKNRYLAEAMALLKAIEGSNLDPDIQVNNIAIDGMCRAGELEAAR 466
Query: 467 ELLGNFNHPNNEPGINGLSISVD 489
+L N + +P + SI ++
Sbjct: 467 DLFSNLSSKGLQPDVWTYSIMIN 489
Score = 128 bits (321), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 91/402 (22%), Positives = 176/402 (43%), Gaps = 10/402 (2%)
Query: 59 PKDLVLGTLVRLKQLKKWNVVSEVLEWL--RIQSWWDFNEMDFLMLITAYGKQGDFNKAE 116
P + GTL+ L K S + L +Q N + +I + K +A
Sbjct: 164 PDVVTYGTLI--NGLCKVGNTSAAIRLLGSMVQKNCQPNVFAYNTIIDSLCKDRQVTEAF 221
Query: 117 KVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLF 176
+ S M KG +P + ++ +L+ A +K+ + M S P +++ ++
Sbjct: 222 NLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSKIMPDVVSFNTVVDAL 281
Query: 177 VEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQ 236
+ K EA +V ++ + ++P+ + ++ + ++A K+F M +G
Sbjct: 282 CKEGKVTEAHDVVDKMI---QRGVEPNVVTYTALMDGHCLLSEMDEAVKVFDTMVCKGCM 338
Query: 237 QSTVTYNSLMSFETNYKEVSK---IYDQMQRAGLQPDVVSYALLINAYGKARREEEALAV 293
+ ++YN+L++ + + K ++ +M R L PD V+Y+ LI+ R ++A+A+
Sbjct: 339 PNVISYNTLINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQDAIAL 398
Query: 294 FEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVN 353
F EM+ P Y ILLD + + +A + K + PDI +
Sbjct: 399 FHEMVACSQIPNLVTYRILLDYLCKNRYLAEAMALLKAIEGSNLDPDIQVNNIAIDGMCR 458
Query: 354 ASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTI 413
A ++E A F L G P+V TY +I G + L++ +++ +M NG N I
Sbjct: 459 AGELEAARDLFSNLSSKGLQPDVWTYSIMINGLCRRGLLDEASKLFREMDENGCTLNGCI 518
Query: 414 FTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSL 455
+ TI + +N + A+ +EM + GF D + + +
Sbjct: 519 YNTITRGFLRNNETSRAIQLLQEMVARGFSADASTMTLFVKM 560
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 98/231 (42%)
Query: 259 YDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAI 318
+++M R P V + L+ + K + L++ +M G+ P +IL+++F
Sbjct: 49 FNRMLRMQPPPSTVDFNKLLTSIAKMKHHSTLLSLSHQMDSFGIPPNIYTLHILINSFCH 108
Query: 319 SGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVIT 378
V A +V + + PD ++TT++ + A F ++ +GF P+V+T
Sbjct: 109 LNRVGFAFSVLAKILKLGHQPDTATFTTLIRGIYVEGKIGEALHLFDKMIGEGFRPDVVT 168
Query: 379 YGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEME 438
YGTLI G KV N + + M +PN + TI+D+ K++ A + EM
Sbjct: 169 YGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAYNTIIDSLCKDRQVTEAFNLFSEMV 228
Query: 439 SCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGINGLSISVD 489
+ G PD N L+ E LL P + + VD
Sbjct: 229 TKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSKIMPDVVSFNTVVD 279
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 68/298 (22%), Positives = 123/298 (41%), Gaps = 47/298 (15%)
Query: 45 VAVLRSERTRGQPLPKDLVLGTLVRLKQLKKWNVVSEVLEWL--RIQSWWDFNEMDFLML 102
VA L +E + +P + T+V L K V+E + + IQ + N + + L
Sbjct: 255 VATLLNEMVDSKIMPDVVSFNTVV--DALCKEGKVTEAHDVVDKMIQRGVEPNVVTYTAL 312
Query: 103 ITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGG----------------- 145
+ + + ++A KV M KG P+V+S+ L+ Y +
Sbjct: 313 MDGHCLLSEMDEAVKVFDTMVCKGCMPNVISYNTLINGYCKIQRIDKAMYLFGEMCRQEL 372
Query: 146 ------------------RYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEE 187
R ++A A+F M + P+ +TY+I+L + EA
Sbjct: 373 IPDTVTYSTLIHGLCHVERLQDAIALFHEMVACSQIPNLVTYRILLDYLCKNRYLAEA-- 430
Query: 188 VFMTLLDE-EKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLM 246
M LL E S L PD ++ ++ I +AG E AR LF+ ++ +G+Q TY+ ++
Sbjct: 431 --MALLKAIEGSNLDPDIQVNNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVWTYSIMI 488
Query: 247 SFETN---YKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAG 301
+ E SK++ +M G + Y + + + A+ + +EM+ G
Sbjct: 489 NGLCRRGLLDEASKLFREMDENGCTLNGCIYNTITRGFLRNNETSRAIQLLQEMVARG 546
Score = 46.2 bits (108), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 35/173 (20%), Positives = 65/173 (37%)
Query: 322 VDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGT 381
+D A + F M R + P + +L++ ++ G PN+ T
Sbjct: 42 IDGAISSFNRMLRMQPPPSTVDFNKLLTSIAKMKHHSTLLSLSHQMDSFGIPPNIYTLHI 101
Query: 382 LIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCG 441
LI + +N + + K+ G +P+ FTT++ A+ + +M G
Sbjct: 102 LINSFCHLNRVGFAFSVLAKILKLGHQPDTATFTTLIRGIYVEGKIGEALHLFDKMIGEG 161
Query: 442 FPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGINGLSISVDEEDDD 494
F PD L++ + A LLG+ N +P + + +D D
Sbjct: 162 FRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAYNTIIDSLCKD 214
>gi|242066030|ref|XP_002454304.1| hypothetical protein SORBIDRAFT_04g028250 [Sorghum bicolor]
gi|241934135|gb|EES07280.1| hypothetical protein SORBIDRAFT_04g028250 [Sorghum bicolor]
Length = 638
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 107/452 (23%), Positives = 205/452 (45%), Gaps = 42/452 (9%)
Query: 33 RLMNQIEEVGSAVAVLRSERTRGQPLPKDLVLGTLVRLKQLKKWNVVSEVLEWLRIQSWW 92
R++ + V A+A+ +TR ++ L ++ V E+ + +
Sbjct: 167 RMLGNAKMVSKAIAIFYQIKTRKCQPTAQAYNSMIIMLMHEGQYGKVHELYNEMSTEGHC 226
Query: 93 DFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEA 152
+ M + LI+A+ K G + A ++L+ M + G P+ +T L+ + + A +
Sbjct: 227 FPDTMTYSALISAFCKLGRRDSATQLLNEMKENGMQPTTKIYTMLITLFFKLDDVHGALS 286
Query: 153 IFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIY 212
+F M+ RP TY +++ +A + EA F + ++ +PD + + MI
Sbjct: 287 LFEEMRHQYCRPDVFTYTELIRGLGKAGRIDEAYHFFYEM---QREGCRPDTVVMNNMIN 343
Query: 213 MYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMS--FETNYK--EVSKIYDQMQRAGLQ 268
KAG + A KLF M S VTYN+++ FE+ + EV +++M+ +G+
Sbjct: 344 FLGKAGRLDDAMKLFQEMGTLRCIPSVVTYNTIIKALFESKSRASEVPSWFERMKESGIS 403
Query: 269 PDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDA------------- 315
P +Y++LI+ + K R E+A+ + EEM + G P AY L+DA
Sbjct: 404 PSSFTYSILIDGFCKTNRMEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLACEL 463
Query: 316 ---------------FAI-------SGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVN 353
+A+ +G +D A +F M + C+PD+ +Y ++S
Sbjct: 464 FQELKENCGSSSARVYAVMIKHLGKAGRLDDAINMFDEMNKLGCAPDVYAYNALMSGLAR 523
Query: 354 ASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTI 413
++ A RR+++ G +P++ +Y ++ G AK + ME+ M+ + ++P+
Sbjct: 524 TGMLDEALSTMRRMQEHGCIPDINSYNIILNGLAKTGGPHRAMEMLSNMKQSTVRPDVVS 583
Query: 414 FTTIMDAYGKNKDFDSAVVWYKEMESCGFPPD 445
+ T++ A F+ A +EM + GF D
Sbjct: 584 YNTVLGALSHAGMFEEAAKLMEEMNTLGFEYD 615
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 113/456 (24%), Positives = 198/456 (43%), Gaps = 48/456 (10%)
Query: 77 NVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTA 136
NV + W + ++ + ++ LI + + K++ M + VV+ T
Sbjct: 104 NVKMQFFRWAAKRRNYEHDTSTYMALIRCLEVVEQYGEMWKMIQEMVRNPIC--VVTPTE 161
Query: 137 LMEA---YGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLL 193
L E G A AIF ++++ +P+A Y ++ + + ++ + E++ +
Sbjct: 162 LSEVVRMLGNAKMVSKAIAIFYQIKTRKCQPTAQAYNSMIIMLMHEGQYGKVHELYNEMS 221
Query: 194 DEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYK 253
E PD + +I + K G + A +L M E G+Q +T Y L++
Sbjct: 222 TEGHC--FPDTMTYSALISAFCKLGRRDSATQLLNEMKENGMQPTTKIYTMLITLFFKLD 279
Query: 254 EVS---KIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYN 310
+V ++++M+ +PDV +Y LI GKA R +EA F EM G RP N
Sbjct: 280 DVHGALSLFEEMRHQYCRPDVFTYTELIRGLGKAGRIDEAYHFFYEMQREGCRPDTVVMN 339
Query: 311 ILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSA-YVNASDMEGAEKFFRRLKQ 369
+++ +G +D A +F+ M RC P + +Y T++ A + + S +F R+K+
Sbjct: 340 NMINFLGKAGRLDDAMKLFQEMGTLRCIPSVVTYNTIIKALFESKSRASEVPSWFERMKE 399
Query: 370 DGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDS 429
G P+ TY LI G+ K N +EK M + ++M G P + +++DA GK K +D
Sbjct: 400 SGISPSSFTYSILIDGFCKTNRMEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDL 459
Query: 430 AVVWYKEM-ESCG----------------------------------FPPDQKAKNILLS 454
A ++E+ E+CG PD A N L+S
Sbjct: 460 ACELFQELKENCGSSSARVYAVMIKHLGKAGRLDDAINMFDEMNKLGCAPDVYAYNALMS 519
Query: 455 -LAKTADERNEANELLGNFNHPNNEPGINGLSISVD 489
LA+T +EA + P IN +I ++
Sbjct: 520 GLARTG-MLDEALSTMRRMQEHGCIPDINSYNIILN 554
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 94/395 (23%), Positives = 189/395 (47%), Gaps = 17/395 (4%)
Query: 94 FNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYA-PSVVSHTALMEAYGRGGRYKNAEA 152
+N M +++ +G + K ++ + M+ +G+ P ++++AL+ A+ + GR +A
Sbjct: 197 YNSMIIMLM-----HEGQYGKVHELYNEMSTEGHCFPDTMTYSALISAFCKLGRRDSATQ 251
Query: 153 IFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSP-LKPDQKMFHMMI 211
+ M+ +G +P+ Y +++ LF + + A ++L +E + +PD + +I
Sbjct: 252 LLNEMKENGMQPTTKIYTMLITLFFKLDDVHGA----LSLFEEMRHQYCRPDVFTYTELI 307
Query: 212 YMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSF---ETNYKEVSKIYDQMQRAGLQ 268
KAG ++A F M G + TV N++++F + K++ +M
Sbjct: 308 RGLGKAGRIDEAYHFFYEMQREGCRPDTVVMNNMINFLGKAGRLDDAMKLFQEMGTLRCI 367
Query: 269 PDVVSYALLINAYGKAR-REEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQART 327
P VV+Y +I A +++ R E + FE M ++G+ P+ Y+IL+D F + +++A
Sbjct: 368 PSVVTYNTIIKALFESKSRASEVPSWFERMKESGISPSSFTYSILIDGFCKTNRMEKAMM 427
Query: 328 VFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYA 387
+ + M P +Y +++ A A + A + F+ LK++ + Y +IK
Sbjct: 428 LLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLACELFQELKENCGSSSARVYAVMIKHLG 487
Query: 388 KVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQK 447
K L+ + ++D+M G P+ + +M + D A+ + M+ G PD
Sbjct: 488 KAGRLDDAINMFDEMNKLGCAPDVYAYNALMSGLARTGMLDEALSTMRRMQEHGCIPDIN 547
Query: 448 AKNILLS-LAKTADERNEANELLGNFNHPNNEPGI 481
+ NI+L+ LAKT + A E+L N P +
Sbjct: 548 SYNIILNGLAKTGGP-HRAMEMLSNMKQSTVRPDV 581
Score = 125 bits (314), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 85/325 (26%), Positives = 150/325 (46%), Gaps = 5/325 (1%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
LI GK G ++A M ++G P V ++ G+ GR +A +F+ M +
Sbjct: 306 LIRGLGKAGRIDEAYHFFYEMQREGCRPDTVVMNNMINFLGKAGRLDDAMKLFQEMGTLR 365
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
PS +TY I+K E+ A EV ++S + P + ++I + K E
Sbjct: 366 CIPSVVTYNTIIKALFESKS--RASEVPSWFERMKESGISPSSFTYSILIDGFCKTNRME 423
Query: 222 KARKLFALMAERGVQQSTVTYNSL---MSFETNYKEVSKIYDQMQRAGLQPDVVSYALLI 278
KA L M E+G Y SL + Y +++ +++ YA++I
Sbjct: 424 KAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLACELFQELKENCGSSSARVYAVMI 483
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCS 338
GKA R ++A+ +F+EM G P AYN L+ A +GM+D+A + + M+ C
Sbjct: 484 KHLGKAGRLDDAINMFDEMNKLGCAPDVYAYNALMSGLARTGMLDEALSTMRRMQEHGCI 543
Query: 339 PDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEI 398
PDI SY +L+ A + +KQ P+V++Y T++ + E+ ++
Sbjct: 544 PDINSYNIILNGLAKTGGPHRAMEMLSNMKQSTVRPDVVSYNTVLGALSHAGMFEEAAKL 603
Query: 399 YDKMRVNGIKPNQTIFTTIMDAYGK 423
++M G + + +++I++A GK
Sbjct: 604 MEEMNTLGFEYDLITYSSILEAIGK 628
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 81/295 (27%), Positives = 141/295 (47%), Gaps = 9/295 (3%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEA-YGRGGRYKNAEAIFRRMQSS 160
+I GK G + A K+ M PSVV++ +++A + R + F RM+ S
Sbjct: 341 MINFLGKAGRLDDAMKLFQEMGTLRCIPSVVTYNTIIKALFESKSRASEVPSWFERMKES 400
Query: 161 GPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDE-EKSPLKPDQKMFHMMIYMYKKAGG 219
G PS+ TY I++ F + N+ ++A M LL+E ++ P + +I KA
Sbjct: 401 GISPSSFTYSILIDGFCKTNRMEKA----MMLLEEMDEKGFPPCPAAYCSLIDALGKAKR 456
Query: 220 YEKARKLFALMAERGVQQSTVTYNSLMSF---ETNYKEVSKIYDQMQRAGLQPDVVSYAL 276
Y+ A +LF + E S Y ++ + ++D+M + G PDV +Y
Sbjct: 457 YDLACELFQELKENCGSSSARVYAVMIKHLGKAGRLDDAINMFDEMNKLGCAPDVYAYNA 516
Query: 277 LINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDR 336
L++ + +EAL+ M + G P +YNI+L+ A +G +A + M++
Sbjct: 517 LMSGLARTGMLDEALSTMRRMQEHGCIPDINSYNIILNGLAKTGGPHRAMEMLSNMKQST 576
Query: 337 CSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNN 391
PD+ SY T+L A +A E A K + GF ++ITY ++++ KV++
Sbjct: 577 VRPDVVSYNTVLGALSHAGMFEEAAKLMEEMNTLGFEYDLITYSSILEAIGKVDH 631
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 63/272 (23%), Positives = 126/272 (46%), Gaps = 48/272 (17%)
Query: 64 LGTLVRLKQLKKWNVV-----------SEVLEWL-RI-QSWWDFNEMDFLMLITAYGKQG 110
+GTL + + +N + SEV W R+ +S + + +LI + K
Sbjct: 361 MGTLRCIPSVVTYNTIIKALFESKSRASEVPSWFERMKESGISPSSFTYSILIDGFCKTN 420
Query: 111 DFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQ 170
KA +L M++KG+ P ++ +L++A G+ RY A +F+ ++ + SA Y
Sbjct: 421 RMEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLACELFQELKENCGSSSARVYA 480
Query: 171 IILK-------------LFVEANKFKEAEEVF-----------MTLLDEEKSPLK----- 201
+++K +F E NK A +V+ +LDE S ++
Sbjct: 481 VMIKHLGKAGRLDDAINMFDEMNKLGCAPDVYAYNALMSGLARTGMLDEALSTMRRMQEH 540
Query: 202 ---PDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLM---SFETNYKEV 255
PD +++++ K GG +A ++ + M + V+ V+YN+++ S ++E
Sbjct: 541 GCIPDINSYNIILNGLAKTGGPHRAMEMLSNMKQSTVRPDVVSYNTVLGALSHAGMFEEA 600
Query: 256 SKIYDQMQRAGLQPDVVSYALLINAYGKARRE 287
+K+ ++M G + D+++Y+ ++ A GK E
Sbjct: 601 AKLMEEMNTLGFEYDLITYSSILEAIGKVDHE 632
>gi|255661154|gb|ACU25746.1| pentatricopeptide repeat-containing protein [Verbena intermedia]
Length = 426
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 96/374 (25%), Positives = 182/374 (48%), Gaps = 37/374 (9%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
LI K D+ KA + S + + G+ P +V++ A++ +G+ ++ A ++ M+++G
Sbjct: 50 LIELSRKLCDYXKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMRTAG 109
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
P+ +Y +L ++VE KF EA +F + E K L D ++MI +Y + G +
Sbjct: 110 VTPNTASYSTLLTMYVENKKFLEALSIFAEM-REIKCLL--DLTTCNIMIDVYGQLGMAK 166
Query: 222 KARKLFALMAERGVQQSTVTYNSLMSFETN---YKEVSKIYDQMQRAGLQPDVVSYALLI 278
+A KLF M + G++ + V+YN+L+ + + E ++ MQR ++ +VV+Y ++
Sbjct: 167 EADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMM 226
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCS 338
YGK E+A + +EM + G+ P Y+ ++ + G +D+A +F+ +R
Sbjct: 227 MIYGKTLEHEKANNLIQEMQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSXGVD 286
Query: 339 PDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVP------------------------ 374
D Y TM+ AY A + A++ LK+ +P
Sbjct: 287 IDQVLYQTMIVAYERAGLVAHAKRLLHELKRPDNIPRDIAIHILAGAGRIEEATWVFRQA 346
Query: 375 -------NVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDF 427
++ + +I ++K ++E++DKMR G P+ + +++AYGK +F
Sbjct: 347 IDAGEVKDITVFERMIHLFSKYKKYGNVVEVFDKMRGLGYFPDSNVIALVLNAYGKLHEF 406
Query: 428 DSAVVWYKEMESCG 441
D A Y EM+ G
Sbjct: 407 DKANDVYMEMQEVG 420
Score = 125 bits (315), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 84/318 (26%), Positives = 146/318 (45%), Gaps = 38/318 (11%)
Query: 200 LKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFE---TNYKEVS 256
L PD+ + +I + K G ++ A M + V V Y++L+ +Y +
Sbjct: 5 LSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDYXKAI 64
Query: 257 KIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAF 316
I+ +++R+G PD+V+Y +IN +GKA+ EA ++ EM AGV P +Y+ LL +
Sbjct: 65 SIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVTPNTASYSTLLTMY 124
Query: 317 AISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNV 376
+ +A ++F MR +C D+ + M+ Y + A+K F +++ G PNV
Sbjct: 125 VENKKFLEALSIFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNV 184
Query: 377 ITYGTLIKGYA---------------KVNNLEK-------MMEIYDK------------- 401
++Y TL++ Y + N+E+ MM IY K
Sbjct: 185 VSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLIQE 244
Query: 402 MRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADE 461
M+ GI+PN ++TI+ +GK D A + ++++ S G DQ ++ + A
Sbjct: 245 MQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSXGVDIDQVLYQTMIVAYERAGL 304
Query: 462 RNEANELLGNFNHPNNEP 479
A LL P+N P
Sbjct: 305 VAHAKRLLHELKRPDNIP 322
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 45/181 (24%), Positives = 79/181 (43%)
Query: 301 GVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGA 360
+ P Y+ L+ F G+ D A + + M +DR D+ Y+ ++ D A
Sbjct: 4 ALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDYXKA 63
Query: 361 EKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDA 420
F RLK+ GF P+++ Y +I + K + + +MR G+ PN ++T++
Sbjct: 64 ISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVTPNTASYSTLLTM 123
Query: 421 YGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPG 480
Y +NK F A+ + EM D NI++ + EA++L EP
Sbjct: 124 YVENKKFLEALSIFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPN 183
Query: 481 I 481
+
Sbjct: 184 V 184
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 66/309 (21%), Positives = 131/309 (42%), Gaps = 45/309 (14%)
Query: 101 MLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSS 160
++I YG+ G +A+K+ M K G P+VVS+ L+ YG + A +FR MQ
Sbjct: 154 IMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRK 213
Query: 161 GPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGY 220
+ +TY + M+ +Y K +
Sbjct: 214 NIEQNVVTY--------------------------------------NSMMMIYGKTLEH 235
Query: 221 EKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSK---IYDQMQRAGLQPDVVSYALL 277
EKA L M RG++ +++TY++++S ++ + ++ +++ G+ D V Y +
Sbjct: 236 EKANNLIQEMQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSXGVDIDQVLYQTM 295
Query: 278 INAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRC 337
I AY +A A + E+ RP + +I + A +G +++A VF+
Sbjct: 296 IVAYERAGLVAHAKRLLHEL----KRPDNIPRDIAIHILAGAGRIEEATWVFRQAIDAGE 351
Query: 338 SPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMME 397
DI + M+ + + F +++ G+ P+ ++ Y K++ +K +
Sbjct: 352 VKDITVFERMIHLFSKYKKYGNVVEVFDKMRGLGYFPDSNVIALVLNAYGKLHEFDKAND 411
Query: 398 IYDKMRVNG 406
+Y +M+ G
Sbjct: 412 VYMEMQEVG 420
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 58/241 (24%), Positives = 108/241 (44%), Gaps = 37/241 (15%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + + L+ YG F +A + M +K +VV++ ++M YG+ ++ A +
Sbjct: 183 NVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLI 242
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
+ MQ+ G P+++TY I+ ++ + K A +F L + DQ ++ MI Y
Sbjct: 243 QEMQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKL---RSXGVDIDQVLYQTMIVAY 299
Query: 215 KKAGGYEKARKLF---------------ALMAERG-VQQSTVTYNS-------------- 244
++AG A++L ++A G ++++T +
Sbjct: 300 ERAGLVAHAKRLLHELKRPDNIPRDIAIHILAGAGRIEEATWVFRQAIDAGEVKDITVFE 359
Query: 245 ----LMSFETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDA 300
L S Y V +++D+M+ G PD AL++NAYGK ++A V+ EM +
Sbjct: 360 RMIHLFSKYKKYGNVVEVFDKMRGLGYFPDSNVIALVLNAYGKLHEFDKANDVYMEMQEV 419
Query: 301 G 301
G
Sbjct: 420 G 420
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/123 (22%), Positives = 64/123 (52%)
Query: 333 RRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNL 392
R SPD +Y+T+++ + + A + ++++QD +++ Y LI+ K+ +
Sbjct: 1 RERALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDY 60
Query: 393 EKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNIL 452
K + I+ +++ +G P+ + +++ +GK K F A EM + G P+ + + L
Sbjct: 61 XKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVTPNTASYSTL 120
Query: 453 LSL 455
L++
Sbjct: 121 LTM 123
>gi|168028441|ref|XP_001766736.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162681945|gb|EDQ68367.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 560
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 91/349 (26%), Positives = 163/349 (46%), Gaps = 41/349 (11%)
Query: 124 KKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFK 183
++GY V ++T ++ GR ++ + + M+ G P +TY N+
Sbjct: 60 QEGYKHDVCTYTTMIGIMGRARNFEACSRLLQEMRREGCEPCVVTY----------NR-- 107
Query: 184 EAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYN 243
+I+ Y +A +A ++F M E G VTY
Sbjct: 108 --------------------------LIHAYGRANFLGEAMRIFYQMQEEGCSPDRVTYC 141
Query: 244 SLMSFETN---YKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDA 300
+L+ + + +Y +MQ+AG QPD +Y+++I+ GKA + EAL +FEEM++
Sbjct: 142 TLVDLHSKAGFHDNAMDMYQKMQQAGFQPDTFTYSVIIHCLGKAGKVSEALKLFEEMVER 201
Query: 301 GVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGA 360
G P+ YNI++D A SG A ++ M+ PD +Y+ M+ ++ A
Sbjct: 202 GFAPSLVTYNIIIDLQAKSGNYVMAMKLYNDMQDAGFHPDRVTYSIMMEVLGQIGHLQEA 261
Query: 361 EKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDA 420
E F ++Q G+VP+ YG ++ + K N E+ +E Y KM +G+ PN I +++ +
Sbjct: 262 ELMFNEMEQAGWVPDAPIYGVMVDMWGKARNAERALEWYQKMLDSGLTPNVQISNSLLGS 321
Query: 421 YGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELL 469
Y + + FD A + M++ G P + ILLS + + ++ L+
Sbjct: 322 YLRMQQFDLAFGVIETMKAWGLVPTLQTHTILLSSCTASAQHHQVVNLM 370
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 85/317 (26%), Positives = 155/317 (48%), Gaps = 6/317 (1%)
Query: 70 LKQLKKWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAP 129
LK K+ + + +W + Q + + + +I G+ +F ++L M ++G P
Sbjct: 41 LKHQKESGLALKFFDWAKEQEGYKHDVCTYTTMIGIMGRARNFEACSRLLQEMRREGCEP 100
Query: 130 SVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVF 189
VV++ L+ AYGR A IF +MQ G P +TY ++ L +A A +++
Sbjct: 101 CVVTYNRLIHAYGRANFLGEAMRIFYQMQEEGCSPDRVTYCTLVDLHSKAGFHDNAMDMY 160
Query: 190 MTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFE 249
+ +++ +PD + ++I+ KAG +A KLF M ERG S VTYN ++ +
Sbjct: 161 QKM---QQAGFQPDTFTYSVIIHCLGKAGKVSEALKLFEEMVERGFAPSLVTYNIIIDLQ 217
Query: 250 T---NYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTH 306
NY K+Y+ MQ AG PD V+Y++++ G+ +EA +F EM AG P
Sbjct: 218 AKSGNYVMAMKLYNDMQDAGFHPDRVTYSIMMEVLGQIGHLQEAELMFNEMEQAGWVPDA 277
Query: 307 KAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRR 366
Y +++D + + ++A ++ M +P++ ++L +Y+ + A
Sbjct: 278 PIYGVMVDMWGKARNAERALEWYQKMLDSGLTPNVQISNSLLGSYLRMQQFDLAFGVIET 337
Query: 367 LKQDGFVPNVITYGTLI 383
+K G VP + T+ L+
Sbjct: 338 MKAWGLVPTLQTHTILL 354
Score = 121 bits (304), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 71/268 (26%), Positives = 139/268 (51%), Gaps = 6/268 (2%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
LI AYG+ +A ++ M ++G +P V++ L++ + + G + NA ++++MQ +G
Sbjct: 108 LIHAYGRANFLGEAMRIFYQMQEEGCSPDRVTYCTLVDLHSKAGFHDNAMDMYQKMQQAG 167
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
+P TY +I+ +A K EA ++F +++ P ++++I + K+G Y
Sbjct: 168 FQPDTFTYSVIIHCLGKAGKVSEALKLFEEMVER---GFAPSLVTYNIIIDLQAKSGNYV 224
Query: 222 KARKLFALMAERGVQQSTVTYNSLMSFE---TNYKEVSKIYDQMQRAGLQPDVVSYALLI 278
A KL+ M + G VTY+ +M + +E ++++M++AG PD Y +++
Sbjct: 225 MAMKLYNDMQDAGFHPDRVTYSIMMEVLGQIGHLQEAELMFNEMEQAGWVPDAPIYGVMV 284
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCS 338
+ +GKAR E AL +++MLD+G+ P + N LL ++ D A V + M+
Sbjct: 285 DMWGKARNAERALEWYQKMLDSGLTPNVQISNSLLGSYLRMQQFDLAFGVIETMKAWGLV 344
Query: 339 PDICSYTTMLSAYVNASDMEGAEKFFRR 366
P + ++T +LS+ ++ R
Sbjct: 345 PTLQTHTILLSSCTASAQHHQVVNLMHR 372
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 106/209 (50%), Gaps = 1/209 (0%)
Query: 263 QRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMV 322
++ G + DV +Y +I G+AR E + +EM G P YN L+ A+ + +
Sbjct: 59 EQEGYKHDVCTYTTMIGIMGRARNFEACSRLLQEMRREGCEPCVVTYNRLIHAYGRANFL 118
Query: 323 DQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTL 382
+A +F M+ + CSPD +Y T++ + A + A +++++Q GF P+ TY +
Sbjct: 119 GEAMRIFYQMQEEGCSPDRVTYCTLVDLHSKAGFHDNAMDMYQKMQQAGFQPDTFTYSVI 178
Query: 383 IKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGF 442
I K + + ++++++M G P+ + I+D K+ ++ A+ Y +M+ GF
Sbjct: 179 IHCLGKAGKVSEALKLFEEMVERGFAPSLVTYNIIIDLQAKSGNYVMAMKLYNDMQDAGF 238
Query: 443 PPDQKAKNILLSLAKTADERNEANELLGN 471
PD+ +I++ + EA EL+ N
Sbjct: 239 HPDRVTYSIMMEVLGQIGHLQEA-ELMFN 266
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 78/150 (52%)
Query: 340 DICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIY 399
D+C+YTTM+ A + E + + ++++G P V+TY LI Y + N L + M I+
Sbjct: 66 DVCTYTTMIGIMGRARNFEACSRLLQEMRREGCEPCVVTYNRLIHAYGRANFLGEAMRIF 125
Query: 400 DKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTA 459
+M+ G P++ + T++D + K D+A+ Y++M+ GF PD ++++ A
Sbjct: 126 YQMQEEGCSPDRVTYCTLVDLHSKAGFHDNAMDMYQKMQQAGFQPDTFTYSVIIHCLGKA 185
Query: 460 DERNEANELLGNFNHPNNEPGINGLSISVD 489
+ +EA +L P + +I +D
Sbjct: 186 GKVSEALKLFEEMVERGFAPSLVTYNIIID 215
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 61/250 (24%), Positives = 113/250 (45%), Gaps = 40/250 (16%)
Query: 99 FLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQ 158
+ ++I GK G ++A K+ M ++G+APS+V++ +++ + G Y A ++ MQ
Sbjct: 175 YSVIIHCLGKAGKVSEALKLFEEMVERGFAPSLVTYNIIIDLQAKSGNYVMAMKLYNDMQ 234
Query: 159 SSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAG 218
+G P +TY I++++ + +EAE +F + E++ PD ++ +M+ M+ KA
Sbjct: 235 DAGFHPDRVTYSIMMEVLGQIGHLQEAELMFNEM---EQAGWVPDAPIYGVMVDMWGKAR 291
Query: 219 GYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSKIYDQMQRAGLQPDVVSYALLI 278
E+A + Y +M +GL P+V L+
Sbjct: 292 NAERALEW--------------------------------YQKMLDSGLTPNVQISNSLL 319
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCS 338
+Y + ++ + A V E M G+ PT + + ILL + S Q V M R S
Sbjct: 320 GSYLRMQQFDLAFGVIETMKAWGLVPTLQTHTILLSSCTASA---QHHQVVNLMHRS--S 374
Query: 339 PDICSYTTML 348
+ S+ L
Sbjct: 375 ETVYSFVCTL 384
>gi|242071495|ref|XP_002451024.1| hypothetical protein SORBIDRAFT_05g022840 [Sorghum bicolor]
gi|241936867|gb|EES10012.1| hypothetical protein SORBIDRAFT_05g022840 [Sorghum bicolor]
Length = 813
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 92/355 (25%), Positives = 171/355 (48%), Gaps = 6/355 (1%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
++ A K +KAE +L M KG P ++ +L+ Y G++K A + ++M S G
Sbjct: 257 VVNALCKARAMDKAEAILRQMVDKGVLPDNWTYNSLIYGYSSTGQWKEAVRVSKKMTSQG 316
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
P +T ++ + K K+A +VF ++ + + K D + +M+ Y G
Sbjct: 317 ILPDVVTLNSLMASLCKHGKIKDARDVFDSMAMKGQ---KTDIFSYKIMLNGYATKGCLV 373
Query: 222 KARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSK---IYDQMQRAGLQPDVVSYALLI 278
+LF LM G+ + +N L+ + + I+++M+ G++PDVV+Y+ +I
Sbjct: 374 DLTELFNLMLSDGIAPDSHIFNVLIKAYAKCGMLDRATIIFNEMREQGVEPDVVTYSTVI 433
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCS 338
A + + ++A+ F +M+D GV P+ Y+ L+ F G + +A+ + M
Sbjct: 434 AALCRIGKMDDAVEKFNQMIDQGVAPSISTYHFLIQGFCTHGDLLKAKDLVLQMMNKGMR 493
Query: 339 PDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEI 398
PDI + +++ + A+ F G PNV+ Y TL+ GY V +E + +
Sbjct: 494 PDIGCFNFIINNLCKLGRVMDAQNIFDFTISIGLHPNVMVYNTLMDGYCLVGKMENALRV 553
Query: 399 YDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILL 453
+D M GI+PN ++ T+++ Y K D + ++E+ G P NI+L
Sbjct: 554 FDVMVSAGIQPNVVVYGTLVNGYCKVGRIDEGLSLFREILHKGIKPSTTLYNIIL 608
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 100/449 (22%), Positives = 189/449 (42%), Gaps = 46/449 (10%)
Query: 92 WDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAE 151
W +N LI Y G + +A +V M +G P VV+ +LM + + G+ K+A
Sbjct: 287 WTYNS-----LIYGYSSTGQWKEAVRVSKKMTSQGILPDVVTLNSLMASLCKHGKIKDAR 341
Query: 152 AIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMI 211
+F M G + +Y+I+L + + E+F +L + + PD +F+++I
Sbjct: 342 DVFDSMAMKGQKTDIFSYKIMLNGYATKGCLVDLTELFNLMLSDG---IAPDSHIFNVLI 398
Query: 212 YMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLM------------------------- 246
Y K G ++A +F M E+GV+ VTY++++
Sbjct: 399 KAYAKCGMLDRATIIFNEMREQGVEPDVVTYSTVIAALCRIGKMDDAVEKFNQMIDQGVA 458
Query: 247 -SFET---------NYKEVSKIYD---QMQRAGLQPDVVSYALLINAYGKARREEEALAV 293
S T + ++ K D QM G++PD+ + +IN K R +A +
Sbjct: 459 PSISTYHFLIQGFCTHGDLLKAKDLVLQMMNKGMRPDIGCFNFIINNLCKLGRVMDAQNI 518
Query: 294 FEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVN 353
F+ + G+ P YN L+D + + G ++ A VF M P++ Y T+++ Y
Sbjct: 519 FDFTISIGLHPNVMVYNTLMDGYCLVGKMENALRVFDVMVSAGIQPNVVVYGTLVNGYCK 578
Query: 354 ASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTI 413
++ FR + G P+ Y ++ G + + +M +GI ++
Sbjct: 579 VGRIDEGLSLFREILHKGIKPSTTLYNIILHGLFQAGRTVPAKVKFHEMTESGIAMDRYT 638
Query: 414 FTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFN 473
++ ++ KN D A++ +KE+ + D NI+++ EA +L + +
Sbjct: 639 YSIVLGGLFKNSCSDEAILLFKELHAMNVKIDITTLNIMIAGMFQIRRVEEAKDLFASIS 698
Query: 474 HPNNEPGINGLSISVDEEDDDDDDDEDDD 502
P + SI + + +E DD
Sbjct: 699 RSGLVPSVVTYSIMMTNLIKEGLVEEADD 727
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 87/346 (25%), Positives = 167/346 (48%), Gaps = 6/346 (1%)
Query: 99 FLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQ 158
F +LI AY K G ++A + + M ++G P VV+++ ++ A R G+ +A F +M
Sbjct: 394 FNVLIKAYAKCGMLDRATIIFNEMREQGVEPDVVTYSTVIAALCRIGKMDDAVEKFNQMI 453
Query: 159 SSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAG 218
G PS TY +++ F +A+++ + ++++ ++PD F+ +I K G
Sbjct: 454 DQGVAPSISTYHFLIQGFCTHGDLLKAKDLVLQMMNKG---MRPDIGCFNFIINNLCKLG 510
Query: 219 GYEKARKLFALMAERGVQQSTVTYNSLM---SFETNYKEVSKIYDQMQRAGLQPDVVSYA 275
A+ +F G+ + + YN+LM + +++D M AG+QP+VV Y
Sbjct: 511 RVMDAQNIFDFTISIGLHPNVMVYNTLMDGYCLVGKMENALRVFDVMVSAGIQPNVVVYG 570
Query: 276 LLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRD 335
L+N Y K R +E L++F E+L G++P+ YNI+L +G A+ F M
Sbjct: 571 TLVNGYCKVGRIDEGLSLFREILHKGIKPSTTLYNIILHGLFQAGRTVPAKVKFHEMTES 630
Query: 336 RCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKM 395
+ D +Y+ +L S + A F+ L ++ T +I G ++ +E+
Sbjct: 631 GIAMDRYTYSIVLGGLFKNSCSDEAILLFKELHAMNVKIDITTLNIMIAGMFQIRRVEEA 690
Query: 396 MEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCG 441
+++ + +G+ P+ ++ +M K + A + ME+ G
Sbjct: 691 KDLFASISRSGLVPSVVTYSIMMTNLIKEGLVEEADDMFSSMENAG 736
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 91/348 (26%), Positives = 156/348 (44%), Gaps = 7/348 (2%)
Query: 148 KNAEAI---FRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQ 204
+ AEA+ RM G P +Y I+LK K +A+E+ + ++ E + P+
Sbjct: 158 RTAEALDILLHRMPHLGCVPDVFSYCIVLKSLCSDRKSGQADEL-LRMMAEGGAVCLPNA 216
Query: 205 KMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSK---IYDQ 261
++ +I + K G KA LF M +RG+ TYN +++ + + K I Q
Sbjct: 217 VAYNTVIDGFFKEGDVNKACDLFNEMVQRGISPDLSTYNCVVNALCKARAMDKAEAILRQ 276
Query: 262 MQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGM 321
M G+ PD +Y LI Y + +EA+ V ++M G+ P N L+ + G
Sbjct: 277 MVDKGVLPDNWTYNSLIYGYSSTGQWKEAVRVSKKMTSQGILPDVVTLNSLMASLCKHGK 336
Query: 322 VDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGT 381
+ AR VF M DI SY ML+ Y + + F + DG P+ +
Sbjct: 337 IKDARDVFDSMAMKGQKTDIFSYKIMLNGYATKGCLVDLTELFNLMLSDGIAPDSHIFNV 396
Query: 382 LIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCG 441
LIK YAK L++ I+++MR G++P+ ++T++ A + D AV + +M G
Sbjct: 397 LIKAYAKCGMLDRATIIFNEMREQGVEPDVVTYSTVIAALCRIGKMDDAVEKFNQMIDQG 456
Query: 442 FPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGINGLSISVD 489
P + L+ T + +A +L+ + P I + ++
Sbjct: 457 VAPSISTYHFLIQGFCTHGDLLKAKDLVLQMMNKGMRPDIGCFNFIIN 504
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 85/368 (23%), Positives = 169/368 (45%), Gaps = 12/368 (3%)
Query: 118 VLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGP--RPSALTYQIILKL 175
+L M G P V S+ ++++ + A+ + R M G P+A+ Y ++
Sbjct: 166 LLHRMPHLGCVPDVFSYCIVLKSLCSDRKSGQADELLRMMAEGGAVCLPNAVAYNTVIDG 225
Query: 176 FVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGV 235
F + +A ++F ++ SP D ++ ++ KA +KA + M ++GV
Sbjct: 226 FFKEGDVNKACDLFNEMVQRGISP---DLSTYNCVVNALCKARAMDKAEAILRQMVDKGV 282
Query: 236 QQSTVTYNSLM---SFETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALA 292
TYNSL+ S +KE ++ +M G+ PDVV+ L+ + K + ++A
Sbjct: 283 LPDNWTYNSLIYGYSSTGQWKEAVRVSKKMTSQGILPDVVTLNSLMASLCKHGKIKDARD 342
Query: 293 VFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYV 352
VF+ M G + +Y I+L+ +A G + +F M D +PD + ++ AY
Sbjct: 343 VFDSMAMKGQKTDIFSYKIMLNGYATKGCLVDLTELFNLMLSDGIAPDSHIFNVLIKAYA 402
Query: 353 NASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQT 412
++ A F +++ G P+V+TY T+I ++ ++ +E +++M G+ P+ +
Sbjct: 403 KCGMLDRATIIFNEMREQGVEPDVVTYSTVIAALCRIGKMDDAVEKFNQMIDQGVAPSIS 462
Query: 413 IFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLS----LAKTADERNEANEL 468
+ ++ + + D A +M + G PD N +++ L + D +N +
Sbjct: 463 TYHFLIQGFCTHGDLLKAKDLVLQMMNKGMRPDIGCFNFIINNLCKLGRVMDAQNIFDFT 522
Query: 469 LGNFNHPN 476
+ HPN
Sbjct: 523 ISIGLHPN 530
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 79/323 (24%), Positives = 155/323 (47%), Gaps = 7/323 (2%)
Query: 128 APSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEE 187
+P++ ++ LM+ R R K A F ++ +G + +L+ EA + EA +
Sbjct: 105 SPTLHTYGILMDCCTRAHRPKLTLAFFGQVLKTGLGIDTIMISNLLRGLCEAKRTAEALD 164
Query: 188 VFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERG--VQQSTVTYNSL 245
+ + + PD + +++ +A +L +MAE G + V YN++
Sbjct: 165 ILLHRMPHLGC--VPDVFSYCIVLKSLCSDRKSGQADELLRMMAEGGAVCLPNAVAYNTV 222
Query: 246 M-SF--ETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGV 302
+ F E + + ++++M + G+ PD+ +Y ++NA KAR ++A A+ +M+D GV
Sbjct: 223 IDGFFKEGDVNKACDLFNEMVQRGISPDLSTYNCVVNALCKARAMDKAEAILRQMVDKGV 282
Query: 303 RPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEK 362
P + YN L+ ++ +G +A V K M PD+ + +++++ ++ A
Sbjct: 283 LPDNWTYNSLIYGYSSTGQWKEAVRVSKKMTSQGILPDVVTLNSLMASLCKHGKIKDARD 342
Query: 363 FFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYG 422
F + G ++ +Y ++ GYA L + E+++ M +GI P+ IF ++ AY
Sbjct: 343 VFDSMAMKGQKTDIFSYKIMLNGYATKGCLVDLTELFNLMLSDGIAPDSHIFNVLIKAYA 402
Query: 423 KNKDFDSAVVWYKEMESCGFPPD 445
K D A + + EM G PD
Sbjct: 403 KCGMLDRATIIFNEMREQGVEPD 425
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/234 (25%), Positives = 106/234 (45%), Gaps = 15/234 (6%)
Query: 89 QSWWDF--------NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEA 140
Q+ +DF N M + L+ Y G A +V M G P+VV + L+
Sbjct: 516 QNIFDFTISIGLHPNVMVYNTLMDGYCLVGKMENALRVFDVMVSAGIQPNVVVYGTLVNG 575
Query: 141 YGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPL 200
Y + GR ++FR + G +PS Y IIL +A + A+ F + +S +
Sbjct: 576 YCKVGRIDEGLSLFREILHKGIKPSTTLYNIILHGLFQAGRTVPAKVKFHEM---TESGI 632
Query: 201 KPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMS--FETNYKEVSK- 257
D+ + +++ K ++A LF + V+ T N +++ F+ E +K
Sbjct: 633 AMDRYTYSIVLGGLFKNSCSDEAILLFKELHAMNVKIDITTLNIMIAGMFQIRRVEEAKD 692
Query: 258 IYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGV-RPTHKAYN 310
++ + R+GL P VV+Y++++ K EEA +F M +AG +P + N
Sbjct: 693 LFASISRSGLVPSVVTYSIMMTNLIKEGLVEEADDMFSSMENAGCEQPNSQLLN 746
>gi|449530367|ref|XP_004172167.1| PREDICTED: pentatricopeptide repeat-containing protein At5g04810,
chloroplastic-like, partial [Cucumis sativus]
Length = 564
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 133/482 (27%), Positives = 224/482 (46%), Gaps = 27/482 (5%)
Query: 59 PKDLVLGTLV----RLKQLKKWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNK 114
P + G L+ +L ++ K VS+ +E I+ N + MLI + K D+
Sbjct: 86 PSVITYGCLINLYAKLGKVSKALEVSKEMEHAGIKH----NMKTYSMLINGFLKLKDWAN 141
Query: 115 AEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILK 174
A + + K G P VV + ++ A+ G+ A + MQ +P+ T+ I+
Sbjct: 142 AFAIFEDLIKDGIKPDVVLYNNIITAFCGMGKMDRAVCTVKEMQKQRHKPTTRTFMPIIH 201
Query: 175 LFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERG 234
F + K+A +VF + S P ++ +I + EKA ++ M G
Sbjct: 202 GFARKGEMKKALDVFDMM---RMSGCIPTVHTYNALILGLVEKRKMEKAEQILDEMTLAG 258
Query: 235 VQQSTVTYNSLMSFETNYKEVSKIY---DQMQRAGLQPDVVSYALLINAYGKARREEEAL 291
V + TY ++M + + K + +++ GLQ DV +Y L+ A K+ R + AL
Sbjct: 259 VSPNEHTYTTIMHGYASLGDTGKAFAYFTKLRDEGLQLDVYTYEALLKACCKSGRMQSAL 318
Query: 292 AVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAY 351
AV +EM + YNIL+D +A G V +A + + M+R+ PDI +YT+ ++A
Sbjct: 319 AVTKEMSAQNIPRNTFIYNILIDGWARRGDVWEAADLMQQMKREGVQPDIHTYTSFINAC 378
Query: 352 VNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQ 411
A DM+ A K +K G PNV TY TLI G+A+ + EK + +++M+++G+KP++
Sbjct: 379 SKAGDMQRATKTIEEMKSVGVKPNVKTYTTLINGWARASLPEKALSCFEEMKLSGLKPDR 438
Query: 412 TIFTTIMDAYGKNKDFDSAVVW------YKEMESCGFPPDQKA----KNILLSLAKTADE 461
++ +M + ++ +EM C D LL + +T E
Sbjct: 439 AVYHCLMTSLLSRATVAHGCIYPGILSVCREMVDCELTVDMGTAVHWSKCLLKIERTGGE 498
Query: 462 RNEANELLGNFNHPNNEPGINGLSISVDEEDDDDDDDEDDDDNIYHDGDGDGDGDDNEDD 521
EA L PN N L+ S + DD+ D +D+DD+I +G GDD E D
Sbjct: 499 ITEA---LQKTFPPNWNVYNNTLTNSNIDSDDESDISDDEDDDICQEGASSNAGDDGESD 555
Query: 522 AE 523
+
Sbjct: 556 GD 557
Score = 125 bits (313), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 88/392 (22%), Positives = 179/392 (45%), Gaps = 8/392 (2%)
Query: 94 FNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGY-APSVVSHTALMEAYGRGGRYKNAEA 152
N + + +I AY ++ + +KAE ++ M ++G AP + HT +M+ Y G
Sbjct: 16 LNAIIYGNIIYAYCQRCNMDKAEALVREMEEEGIDAPIDIYHT-MMDGYTMVGDEDKCLL 74
Query: 153 IFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIY 212
+F R + G PS +TY ++ L+ + K +A EV + E + +K + K + M+I
Sbjct: 75 VFERFKECGLNPSVITYGCLINLYAKLGKVSKALEVSKEM---EHAGIKHNMKTYSMLIN 131
Query: 213 MYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSK---IYDQMQRAGLQP 269
+ K + A +F + + G++ V YN++++ ++ + +MQ+ +P
Sbjct: 132 GFLKLKDWANAFAIFEDLIKDGIKPDVVLYNNIITAFCGMGKMDRAVCTVKEMQKQRHKP 191
Query: 270 DVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVF 329
++ +I+ + + ++AL VF+ M +G PT YN L+ +++A +
Sbjct: 192 TTRTFMPIIHGFARKGEMKKALDVFDMMRMSGCIPTVHTYNALILGLVEKRKMEKAEQIL 251
Query: 330 KCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKV 389
M SP+ +YTT++ Y + D A +F +L+ +G +V TY L+K K
Sbjct: 252 DEMTLAGVSPNEHTYTTIMHGYASLGDTGKAFAYFTKLRDEGLQLDVYTYEALLKACCKS 311
Query: 390 NNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAK 449
++ + + +M I N I+ ++D + + D A ++M+ G PD
Sbjct: 312 GRMQSALAVTKEMSAQNIPRNTFIYNILIDGWARRGDVWEAADLMQQMKREGVQPDIHTY 371
Query: 450 NILLSLAKTADERNEANELLGNFNHPNNEPGI 481
++ A + A + + +P +
Sbjct: 372 TSFINACSKAGDMQRATKTIEEMKSVGVKPNV 403
Score = 48.5 bits (114), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 29/115 (25%), Positives = 52/115 (45%)
Query: 360 AEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMD 419
A+ +F+ K+ N I YG +I Y + N++K + +M GI I+ T+MD
Sbjct: 2 ADHWFQEAKEKHSSLNAIIYGNIIYAYCQRCNMDKAEALVREMEEEGIDAPIDIYHTMMD 61
Query: 420 AYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNH 474
Y D D ++ ++ + CG P L++L + ++A E+ H
Sbjct: 62 GYTMVGDEDKCLLVFERFKECGLNPSVITYGCLINLYAKLGKVSKALEVSKEMEH 116
>gi|410110087|gb|AFV61123.1| pentatricopeptide repeat-containing protein 123, partial [Lantana
urticoides]
Length = 423
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 99/374 (26%), Positives = 181/374 (48%), Gaps = 37/374 (9%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
LI K D++KA + S + G+ P +V++ A++ +G+ ++ A ++ M+++G
Sbjct: 40 LIELSRKLCDYSKAISIFSRLKSSGFTPDLVAYNAMINVFGKAKLFREARSLISEMKTAG 99
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
P+ +Y +L ++VE KF EA VF + + E K L D ++MI +Y + G +
Sbjct: 100 VMPNTTSYSTLLTMYVENKKFLEALSVF-SEMREIKCLL--DLTTCNIMIDVYGQLGMAK 156
Query: 222 KARKLFALMAERGVQQSTVTYNSLMSFETN---YKEVSKIYDQMQRAGLQPDVVSYALLI 278
+A KLF M + G++ + V+YN+L+ + + E ++ MQR ++ +VV+Y +I
Sbjct: 157 EADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMI 216
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCS 338
YGK E+A + +EM G+ P Y+ ++ + G +D+A +F+ +R
Sbjct: 217 MIYGKTLEHEKANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVE 276
Query: 339 PDICSYTTMLSAY-------------------------------VNASDMEGAEKFFRRL 367
D + TM+ AY A +E A FR+
Sbjct: 277 IDQILFQTMIVAYERAGLVAHAKRLLHELKRPDNIPRDTAIHILAGAGRIEEATYVFRQA 336
Query: 368 KQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDF 427
G V ++ + +I +K ++E++DKMR G P+ + +++AYGK ++F
Sbjct: 337 IDAGEVKDITVFERMIHLLSKYKKYSNVVEVFDKMRGLGYFPDSNVIAVVLNAYGKLQEF 396
Query: 428 DSAVVWYKEMESCG 441
D A Y EM+ G
Sbjct: 397 DKANDVYMEMQEVG 410
Score = 130 bits (326), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 78/287 (27%), Positives = 139/287 (48%), Gaps = 3/287 (1%)
Query: 196 EKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSF---ETNY 252
E+ + D ++ +I + +K Y KA +F+ + G V YN++++ +
Sbjct: 26 EQDQVPGDLVLYSNLIELSRKLCDYSKAISIFSRLKSSGFTPDLVAYNAMINVFGKAKLF 85
Query: 253 KEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNIL 312
+E + +M+ AG+ P+ SY+ L+ Y + ++ EAL+VF EM + NI+
Sbjct: 86 REARSLISEMKTAGVMPNTTSYSTLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIM 145
Query: 313 LDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGF 372
+D + GM +A +F MR+ P++ SY T+L Y +A A FR +++
Sbjct: 146 IDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNI 205
Query: 373 VPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVV 432
NV+TY ++I Y K EK + +M+ GI+PN ++TI+ +GK D A +
Sbjct: 206 EQNVVTYNSMIMIYGKTLEHEKANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAM 265
Query: 433 WYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEP 479
++++ S G DQ ++ + A A LL P+N P
Sbjct: 266 LFQKLRSSGVEIDQILFQTMIVAYERAGLVAHAKRLLHELKRPDNIP 312
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 81/323 (25%), Positives = 150/323 (46%), Gaps = 41/323 (12%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
LIT +GK+G F+ A L M + +V ++ L+E + Y A +IF R++SSG
Sbjct: 5 LITHFGKEGLFDAALSWLQKMEQDQVPGDLVLYSNLIELSRKLCDYSKAISIFSRLKSSG 64
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
PD ++ MI ++ KA +
Sbjct: 65 --------------------------------------FTPDLVAYNAMINVFGKAKLFR 86
Query: 222 KARKLFALMAERGVQQSTVTYNSLMSFETNYK---EVSKIYDQMQRAGLQPDVVSYALLI 278
+AR L + M GV +T +Y++L++ K E ++ +M+ D+ + ++I
Sbjct: 87 EARSLISEMKTAGVMPNTTSYSTLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMI 146
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCS 338
+ YG+ +EA +F M G+ P +YN LL + + + +A +F+ M+R
Sbjct: 147 DVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIE 206
Query: 339 PDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEI 398
++ +Y +M+ Y + E A + ++ G PN ITY T+I + KV L++ +
Sbjct: 207 QNVVTYNSMIMIYGKTLEHEKANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAML 266
Query: 399 YDKMRVNGIKPNQTIFTTIMDAY 421
+ K+R +G++ +Q +F T++ AY
Sbjct: 267 FQKLRSSGVEIDQILFQTMIVAY 289
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/244 (23%), Positives = 115/244 (47%), Gaps = 6/244 (2%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + + L+ YG F +A + M +K +VV++ +++ YG+ ++ A +
Sbjct: 173 NVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMIMIYGKTLEHEKANNLI 232
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
+ MQS G P+++TY I+ ++ + K A +F L S ++ DQ +F MI Y
Sbjct: 233 QEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKL---RSSGVEIDQILFQTMIVAY 289
Query: 215 KKAGGYEKARKLFA-LMAERGVQQSTVTYNSLMSFETNYKEVSKIYDQMQRAGLQPDVVS 273
++AG A++L L + + T + +++ +E + ++ Q AG D+
Sbjct: 290 ERAGLVAHAKRLLHELKRPDNIPRDTAIH--ILAGAGRIEEATYVFRQAIDAGEVKDITV 347
Query: 274 YALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMR 333
+ +I+ K ++ + VF++M G P ++L+A+ D+A V+ M+
Sbjct: 348 FERMIHLLSKYKKYSNVVEVFDKMRGLGYFPDSNVIAVVLNAYGKLQEFDKANDVYMEMQ 407
Query: 334 RDRC 337
C
Sbjct: 408 EVGC 411
Score = 78.6 bits (192), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 43/174 (24%), Positives = 77/174 (44%)
Query: 308 AYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRL 367
Y+ L+ F G+ D A + + M +D+ D+ Y+ ++ D A F RL
Sbjct: 1 TYSTLITHFGKEGLFDAALSWLQKMEQDQVPGDLVLYSNLIELSRKLCDYSKAISIFSRL 60
Query: 368 KQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDF 427
K GF P+++ Y +I + K + + +M+ G+ PN T ++T++ Y +NK F
Sbjct: 61 KSSGFTPDLVAYNAMINVFGKAKLFREARSLISEMKTAGVMPNTTSYSTLLTMYVENKKF 120
Query: 428 DSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGI 481
A+ + EM D NI++ + EA++L EP +
Sbjct: 121 LEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNV 174
Score = 40.4 bits (93), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 24/108 (22%), Positives = 46/108 (42%)
Query: 378 TYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEM 437
TY TLI + K + + KM + + + +++ +++ K D+ A+ + +
Sbjct: 1 TYSTLITHFGKEGLFDAALSWLQKMEQDQVPGDLVLYSNLIELSRKLCDYSKAISIFSRL 60
Query: 438 ESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGINGLS 485
+S GF PD A N ++++ A EA L+ P S
Sbjct: 61 KSSGFTPDLVAYNAMINVFGKAKLFREARSLISEMKTAGVMPNTTSYS 108
>gi|302769784|ref|XP_002968311.1| hypothetical protein SELMODRAFT_89033 [Selaginella moellendorffii]
gi|300163955|gb|EFJ30565.1| hypothetical protein SELMODRAFT_89033 [Selaginella moellendorffii]
Length = 600
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 98/396 (24%), Positives = 181/396 (45%), Gaps = 11/396 (2%)
Query: 82 VLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAY 141
V + +R +W N + + L++ G + A+ + M K GY+P VV++ L+ +
Sbjct: 72 VFDGMRKHGFWP-NRITYNALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNTLLHGF 130
Query: 142 GRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLK 201
+ G+ A IF G P +TY ++ F +A+K EA+ + ++ E L
Sbjct: 131 CKVGKLDEALKIFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSES---LV 187
Query: 202 PDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETN----YKEVSK 257
PD ++ ++ K G ++AR L+ ++G + +TY++L+S + +
Sbjct: 188 PDVVTYNSLVNGLCKNGRVDEAR---MLIVDKGFSPNVITYSTLISGLCRELRRLESARQ 244
Query: 258 IYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFA 317
+ ++M G +PD+VSY LI+ + + EAL +F +L G P YNIL+D
Sbjct: 245 LLEKMVLNGCKPDIVSYNALIHGLAREQGVSEALKLFGSVLRQGYEPEVPTYNILIDGLL 304
Query: 318 ISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVI 377
V++A +F + + PD +YT + A +E A + + + G VP+V+
Sbjct: 305 KEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDALLMLKDMDEKGCVPDVV 364
Query: 378 TYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEM 437
++ +I G K +++ + M G PN F T++ + + A+ +KEM
Sbjct: 365 SHNAVINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTLICGQCRAGKWKKAMTTFKEM 424
Query: 438 ESCGFPPDQKAKNILLSLAKTADERNEANELLGNFN 473
G P NIL+ A + E + F+
Sbjct: 425 LKRGVKPTVVTYNILVDGLCKARQEGRIKEAITLFD 460
Score = 145 bits (366), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 100/420 (23%), Positives = 187/420 (44%), Gaps = 42/420 (10%)
Query: 88 IQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRY 147
I++ + + + + L+ + K G ++A K+ K+G+ P VV++ AL+ + + +
Sbjct: 112 IKAGYSPDVVTYNTLLHGFCKVGKLDEALKIFDGAVKRGFVPDVVTYNALINGFCKADKL 171
Query: 148 KNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSP-------- 199
A+ I +RM S P +TY ++ + + EA M ++D+ SP
Sbjct: 172 DEAQRILQRMVSESLVPDVVTYNSLVNGLCKNGRVDEAR---MLIVDKGFSPNVITYSTL 228
Query: 200 -------------------------LKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERG 234
KPD ++ +I+ + G +A KLF + +G
Sbjct: 229 ISGLCRELRRLESARQLLEKMVLNGCKPDIVSYNALIHGLAREQGVSEALKLFGSVLRQG 288
Query: 235 VQQSTVTYNSLMSF---ETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEAL 291
+ TYN L+ E E +++ + + GL+PD ++Y + I+ KA R E+AL
Sbjct: 289 YEPEVPTYNILIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDAL 348
Query: 292 AVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAY 351
+ ++M + G P ++N +++ VD+A + M CSP+ S+ T++
Sbjct: 349 LMLKDMDEKGCVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTLICGQ 408
Query: 352 VNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKV---NNLEKMMEIYDKMRVNGIK 408
A + A F+ + + G P V+TY L+ G K +++ + ++D M G
Sbjct: 409 CRAGKWKKAMTTFKEMLKRGVKPTVVTYNILVDGLCKARQEGRIKEAITLFDAMIEKGRV 468
Query: 409 PNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANEL 468
P+ ++ ++D GK D A ME+ G P+ N L+S D+ +EA EL
Sbjct: 469 PDVVTYSALIDGLGKAGKLDDARRLLGAMEAKGCIPNVYTYNSLISGLCGLDKVDEALEL 528
Score = 142 bits (357), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 91/339 (26%), Positives = 159/339 (46%), Gaps = 9/339 (2%)
Query: 112 FNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQI 171
A ++L M G P +VS+ AL+ R A +F + G P TY I
Sbjct: 239 LESARQLLEKMVLNGCKPDIVSYNALIHGLAREQGVSEALKLFGSVLRQGYEPEVPTYNI 298
Query: 172 ILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMA 231
++ ++ ++ EA E+F L+ K L+PD + + I KAG E A + M
Sbjct: 299 LIDGLLKEDRVNEAFELFSGLV---KHGLEPDAITYTVFIDGLCKAGRVEDALLMLKDMD 355
Query: 232 ERGVQQSTVTYNSL---MSFETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREE 288
E+G V++N++ + E E + M+ G P+ +S+ LI +A + +
Sbjct: 356 EKGCVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTLICGQCRAGKWK 415
Query: 289 EALAVFEEMLDAGVRPTHKAYNILLDAFAIS---GMVDQARTVFKCMRRDRCSPDICSYT 345
+A+ F+EML GV+PT YNIL+D + G + +A T+F M PD+ +Y+
Sbjct: 416 KAMTTFKEMLKRGVKPTVVTYNILVDGLCKARQEGRIKEAITLFDAMIEKGRVPDVVTYS 475
Query: 346 TMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVN 405
++ A ++ A + ++ G +PNV TY +LI G ++ +++ +E++ M
Sbjct: 476 ALIDGLGKAGKLDDARRLLGAMEAKGCIPNVYTYNSLISGLCGLDKVDEALELFVAMVEK 535
Query: 406 GIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPP 444
G P+ + TI+ A K + D A+ + G P
Sbjct: 536 GCVPDTITYGTIISALCKQEMVDKALALFDGSLEAGVVP 574
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 86/381 (22%), Positives = 184/381 (48%), Gaps = 12/381 (3%)
Query: 59 PKDLVLGTLVR--LKQLKKWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAE 116
P + TL+ ++L++ ++LE + + + + + LI ++ ++A
Sbjct: 220 PNVITYSTLISGLCRELRRLESARQLLEKMVLNGCKP-DIVSYNALIHGLAREQGVSEAL 278
Query: 117 KVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLF 176
K+ + ++GY P V ++ L++ + R A +F + G P A+TY + +
Sbjct: 279 KLFGSVLRQGYEPEVPTYNILIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGL 338
Query: 177 VEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQ 236
+A + E+ + L D ++ PD + +I K ++A L + M +G
Sbjct: 339 CKAGR---VEDALLMLKDMDEKGCVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGCS 395
Query: 237 QSTVTYNSLMSFET---NYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARRE---EEA 290
+ +++N+L+ + +K+ + +M + G++P VV+Y +L++ KAR+E +EA
Sbjct: 396 PNAISFNTLICGQCRAGKWKKAMTTFKEMLKRGVKPTVVTYNILVDGLCKARQEGRIKEA 455
Query: 291 LAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSA 350
+ +F+ M++ G P Y+ L+D +G +D AR + M C P++ +Y +++S
Sbjct: 456 ITLFDAMIEKGRVPDVVTYSALIDGLGKAGKLDDARRLLGAMEAKGCIPNVYTYNSLISG 515
Query: 351 YVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPN 410
++ A + F + + G VP+ ITYGT+I K ++K + ++D G+ P
Sbjct: 516 LCGLDKVDEALELFVAMVEKGCVPDTITYGTIISALCKQEMVDKALALFDGSLEAGVVPT 575
Query: 411 QTIFTTIMDAYGKNKDFDSAV 431
++ +++D D A+
Sbjct: 576 SGMYFSLIDGLCAVARVDEAL 596
Score = 131 bits (330), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 95/388 (24%), Positives = 175/388 (45%), Gaps = 21/388 (5%)
Query: 101 MLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSS 160
+L+ + K G KA + + + KG + + + R R +A+ +F M+
Sbjct: 21 ILLRSLLKSGKIEKAHRFVEQLLVKGLC-DISTFNIYISGLCRASRIGDAQTVFDGMRKH 79
Query: 161 GPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGY 220
G P+ +TY +L + +A+ ++ ++ K+ PD ++ +++ + K G
Sbjct: 80 GFWPNRITYNALLSGLCNGGRMSDAQALYERMI---KAGYSPDVVTYNTLLHGFCKVGKL 136
Query: 221 EKARKLFALMAERGVQQSTVTYNSLMSFETN---YKEVSKIYDQMQRAGLQPDVVSYALL 277
++A K+F +RG VTYN+L++ E +I +M L PDVV+Y L
Sbjct: 137 DEALKIFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSESLVPDVVTYNSL 196
Query: 278 INAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGM------VDQARTVFKC 331
+N K R +EA + ++D G P Y+ L ISG+ ++ AR + +
Sbjct: 197 VNGLCKNGRVDEARML---IVDKGFSPNVITYSTL-----ISGLCRELRRLESARQLLEK 248
Query: 332 MRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNN 391
M + C PDI SY ++ + A K F + + G+ P V TY LI G K +
Sbjct: 249 MVLNGCKPDIVSYNALIHGLAREQGVSEALKLFGSVLRQGYEPEVPTYNILIDGLLKEDR 308
Query: 392 LEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNI 451
+ + E++ + +G++P+ +T +D K + A++ K+M+ G PD + N
Sbjct: 309 VNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDALLMLKDMDEKGCVPDVVSHNA 368
Query: 452 LLSLAKTADERNEANELLGNFNHPNNEP 479
+++ +EA LL P
Sbjct: 369 VINGLCKEKRVDEAEVLLSGMEAKGCSP 396
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 89/321 (27%), Positives = 156/321 (48%), Gaps = 13/321 (4%)
Query: 164 PSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKA 223
P A T I+L+ +++ K ++A LL + D F++ I +A A
Sbjct: 14 PDAYTVGILLRSLLKSGKIEKAHRFVEQLLVKGLC----DISTFNIYISGLCRASRIGDA 69
Query: 224 RKLFALMAERGVQQSTVTYNSLMSFETNYKEVS---KIYDQMQRAGLQPDVVSYALLINA 280
+ +F M + G + +TYN+L+S N +S +Y++M +AG PDVV+Y L++
Sbjct: 70 QTVFDGMRKHGFWPNRITYNALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNTLLHG 129
Query: 281 YGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPD 340
+ K + +EAL +F+ + G P YN L++ F + +D+A+ + + M + PD
Sbjct: 130 FCKVGKLDEALKIFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSESLVPD 189
Query: 341 ICSYTTMLSAYVNASDMEGAEKFFRRLKQD-GFVPNVITYGTLIKGYAK-VNNLEKMMEI 398
+ +Y ++++ ++ A R L D GF PNVITY TLI G + + LE ++
Sbjct: 190 VVTYNSLVNGLCKNGRVDEA----RMLIVDKGFSPNVITYSTLISGLCRELRRLESARQL 245
Query: 399 YDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKT 458
+KM +NG KP+ + ++ + + A+ + + G+ P+ NIL+
Sbjct: 246 LEKMVLNGCKPDIVSYNALIHGLAREQGVSEALKLFGSVLRQGYEPEVPTYNILIDGLLK 305
Query: 459 ADERNEANELLGNFNHPNNEP 479
D NEA EL EP
Sbjct: 306 EDRVNEAFELFSGLVKHGLEP 326
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 82/304 (26%), Positives = 142/304 (46%), Gaps = 9/304 (2%)
Query: 101 MLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSS 160
+LI K+ N+A ++ S + K G P +++T ++ + GR ++A + + M
Sbjct: 298 ILIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDALLMLKDMDEK 357
Query: 161 GPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGY 220
G P +++ ++ + + EAE + + E P+ F+ +I +AG +
Sbjct: 358 GCVPDVVSHNAVINGLCKEKRVDEAEVLLSGM---EAKGCSPNAISFNTLICGQCRAGKW 414
Query: 221 EKARKLFALMAERGVQQSTVTYNSLMSF------ETNYKEVSKIYDQMQRAGLQPDVVSY 274
+KA F M +RGV+ + VTYN L+ E KE ++D M G PDVV+Y
Sbjct: 415 KKAMTTFKEMLKRGVKPTVVTYNILVDGLCKARQEGRIKEAITLFDAMIEKGRVPDVVTY 474
Query: 275 ALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRR 334
+ LI+ GKA + ++A + M G P YN L+ VD+A +F M
Sbjct: 475 SALIDGLGKAGKLDDARRLLGAMEAKGCIPNVYTYNSLISGLCGLDKVDEALELFVAMVE 534
Query: 335 DRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEK 394
C PD +Y T++SA ++ A F + G VP Y +LI G V +++
Sbjct: 535 KGCVPDTITYGTIISALCKQEMVDKALALFDGSLEAGVVPTSGMYFSLIDGLCAVARVDE 594
Query: 395 MMEI 398
+++
Sbjct: 595 ALKL 598
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 74/303 (24%), Positives = 140/303 (46%), Gaps = 8/303 (2%)
Query: 191 TLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTV--TYNSLMSF 248
T+ D+ PD +++ K+G EKA + + +G+ + Y S +
Sbjct: 3 TVYDKLVRIYSPDAYTVGILLRSLLKSGKIEKAHRFVEQLLVKGLCDISTFNIYISGLCR 62
Query: 249 ETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKA 308
+ + ++D M++ G P+ ++Y L++ R +A A++E M+ AG P
Sbjct: 63 ASRIGDAQTVFDGMRKHGFWPNRITYNALLSGLCNGGRMSDAQALYERMIKAGYSPDVVT 122
Query: 309 YNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLK 368
YN LL F G +D+A +F + PD+ +Y +++ + A ++ A++ +R+
Sbjct: 123 YNTLLHGFCKVGKLDEALKIFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMV 182
Query: 369 QDGFVPNVITYGTLIKGYAKVNNL-EKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKN-KD 426
+ VP+V+TY +L+ G K + E M I DK G PN ++T++ + +
Sbjct: 183 SESLVPDVVTYNSLVNGLCKNGRVDEARMLIVDK----GFSPNVITYSTLISGLCRELRR 238
Query: 427 FDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGINGLSI 486
+SA ++M G PD + N L+ +EA +L G+ EP + +I
Sbjct: 239 LESARQLLEKMVLNGCKPDIVSYNALIHGLAREQGVSEALKLFGSVLRQGYEPEVPTYNI 298
Query: 487 SVD 489
+D
Sbjct: 299 LID 301
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/235 (24%), Positives = 100/235 (42%), Gaps = 44/235 (18%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
+I K+ ++AE +LS M KG +P+ +S L+ R G++K A F+ M G
Sbjct: 369 VINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTLICGQCRAGKWKKAMTTFKEMLKRG 428
Query: 162 PRPSALTYQIILKLFVEA---NKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAG 218
+P+ +TY I++ +A + KEA +F ++++ + P D + +I KAG
Sbjct: 429 VKPTVVTYNILVDGLCKARQEGRIKEAITLFDAMIEKGRVP---DVVTYSALIDGLGKAG 485
Query: 219 GYEKARKL-----------------------------------FALMAERGVQQSTVTYN 243
+ AR+L F M E+G T+TY
Sbjct: 486 KLDDARRLLGAMEAKGCIPNVYTYNSLISGLCGLDKVDEALELFVAMVEKGCVPDTITYG 545
Query: 244 SLMSFETNYKEVSK---IYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFE 295
+++S + V K ++D AG+ P Y LI+ R +EAL + +
Sbjct: 546 TIISALCKQEMVDKALALFDGSLEAGVVPTSGMYFSLIDGLCAVARVDEALKLLQ 600
>gi|255556189|ref|XP_002519129.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223541792|gb|EEF43340.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 643
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 107/436 (24%), Positives = 199/436 (45%), Gaps = 10/436 (2%)
Query: 35 MNQIEEVGSAVAVLRSERTRGQPLPKDLVLGTLVRLKQLKKWNVVSEVLEWLRIQSWWDF 94
+NQ E V A + + + ++++ L + +LKK +E L ++
Sbjct: 214 LNQTETVWVLYAEMFRLKIKSTVYTFNIMINVLCKEGKLKKAKDFIGSMENLGVKP---- 269
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + + +I Y +G A VL M +G P ++ +L+ +GG+ + A I
Sbjct: 270 NVVTYNTVIHGYCSRGRVEGARMVLDIMKNRGVEPDSYTYGSLISGMCKGGKLEEASGIL 329
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
+M+ G P+A+TY ++ + +A F + + + P ++++I+
Sbjct: 330 EKMKEIGLLPTAVTYNTLIDGYCNKGDLVKA---FGYRDEMVRRAILPTVSTYNLLIHAL 386
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFET---NYKEVSKIYDQMQRAGLQPDV 271
G ++A + M + G+ ++TYN L++ N K+ ++D+M G+QP +
Sbjct: 387 FLEGKMDEADGMIKDMGDSGIVPDSITYNILINGYCRCGNAKKAFNLHDEMISKGIQPTL 446
Query: 272 VSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKC 331
V+Y LI K R + A +FE+++ G P +N L+D +G +D+A + K
Sbjct: 447 VTYTSLIYVLSKRNRMKAADDLFEKIIREGASPDLIMFNALIDGHCANGNLDRAFALLKE 506
Query: 332 MRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNN 391
M + PD +Y T++ +E A + + +K+ G P+ I+Y TLI GY+K +
Sbjct: 507 MDKRNIVPDEVTYNTLMQGRCREGKVEEARELLKEMKRRGIRPDHISYNTLISGYSKRGD 566
Query: 392 LEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNI 451
+ I D+M G P + ++ KN+ D A KEM S G PD
Sbjct: 567 INDAFTIRDEMLSIGFNPTLLTYNALIQGLCKNQQGDLAEELLKEMVSKGITPDDSTYFS 626
Query: 452 LLSLAKTADERNEANE 467
L+ D+ +EA++
Sbjct: 627 LIEGIGKVDDSSEASD 642
Score = 148 bits (373), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 101/412 (24%), Positives = 191/412 (46%), Gaps = 14/412 (3%)
Query: 63 VLGTLVRLKQLKK-WNVVSEVLEWLRIQSW-WDFNEMDFLMLITAYGKQGDFNKAEKVLS 120
+L ++L Q + W + +E+ L+I+S + FN ++I K+G KA+ +
Sbjct: 207 MLSLFLKLNQTETVWVLYAEMFR-LKIKSTVYTFN-----IMINVLCKEGKLKKAKDFIG 260
Query: 121 FMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEAN 180
M G P+VV++ ++ Y GR + A + M++ G P + TY ++ +
Sbjct: 261 SMENLGVKPNVVTYNTVIHGYCSRGRVEGARMVLDIMKNRGVEPDSYTYGSLISGMCKGG 320
Query: 181 KFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTV 240
K +EA + + ++ L P ++ +I Y G KA M R + +
Sbjct: 321 KLEEASGILEKM---KEIGLLPTAVTYNTLIDGYCNKGDLVKAFGYRDEMVRRAILPTVS 377
Query: 241 TYNSLMS---FETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEM 297
TYN L+ E E + M +G+ PD ++Y +LIN Y + ++A + +EM
Sbjct: 378 TYNLLIHALFLEGKMDEADGMIKDMGDSGIVPDSITYNILINGYCRCGNAKKAFNLHDEM 437
Query: 298 LDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDM 357
+ G++PT Y L+ + + A +F+ + R+ SPD+ + ++ + ++
Sbjct: 438 ISKGIQPTLVTYTSLIYVLSKRNRMKAADDLFEKIIREGASPDLIMFNALIDGHCANGNL 497
Query: 358 EGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTI 417
+ A + + + VP+ +TY TL++G + +E+ E+ +M+ GI+P+ + T+
Sbjct: 498 DRAFALLKEMDKRNIVPDEVTYNTLMQGRCREGKVEEARELLKEMKRRGIRPDHISYNTL 557
Query: 418 MDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELL 469
+ Y K D + A EM S GF P N L+ + + A ELL
Sbjct: 558 ISGYSKRGDINDAFTIRDEMLSIGFNPTLLTYNALIQGLCKNQQGDLAEELL 609
Score = 141 bits (356), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 111/433 (25%), Positives = 197/433 (45%), Gaps = 19/433 (4%)
Query: 44 AVAVLRSERTRGQPLPKDLVLGTLVRLKQLKKWNV--VSEVLEWLRIQS--WWDFNEMDF 99
AVAV+ P PK TL LKQ + V V +V L I + + F
Sbjct: 119 AVAVVSR-----SPSPKS----TLHLLKQTIESRVAGVKDVFHELAITRDRLGTKSSIVF 169
Query: 100 LMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQS 159
MLI A + + A + M +KG P + + A++ + + + + ++ M
Sbjct: 170 DMLIRACCELKRGDDAFECFDMMKEKGVVPKIETFNAMLSLFLKLNQTETVWVLYAEMFR 229
Query: 160 SGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGG 219
+ + T+ I++ + + K K+A++ ++ E +KP+ ++ +I+ Y G
Sbjct: 230 LKIKSTVYTFNIMINVLCKEGKLKKAKDFIGSM---ENLGVKPNVVTYNTVIHGYCSRGR 286
Query: 220 YEKARKLFALMAERGVQQSTVTYNSLMSFET---NYKEVSKIYDQMQRAGLQPDVVSYAL 276
E AR + +M RGV+ + TY SL+S +E S I ++M+ GL P V+Y
Sbjct: 287 VEGARMVLDIMKNRGVEPDSYTYGSLISGMCKGGKLEEASGILEKMKEIGLLPTAVTYNT 346
Query: 277 LINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDR 336
LI+ Y +A +EM+ + PT YN+L+ A + G +D+A + K M
Sbjct: 347 LIDGYCNKGDLVKAFGYRDEMVRRAILPTVSTYNLLIHALFLEGKMDEADGMIKDMGDSG 406
Query: 337 CSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMM 396
PD +Y +++ Y + + A + G P ++TY +LI +K N ++
Sbjct: 407 IVPDSITYNILINGYCRCGNAKKAFNLHDEMISKGIQPTLVTYTSLIYVLSKRNRMKAAD 466
Query: 397 EIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLA 456
++++K+ G P+ +F ++D + N + D A KEM+ PD+ N L+
Sbjct: 467 DLFEKIIREGASPDLIMFNALIDGHCANGNLDRAFALLKEMDKRNIVPDEVTYNTLMQGR 526
Query: 457 KTADERNEANELL 469
+ EA ELL
Sbjct: 527 CREGKVEEARELL 539
>gi|413922209|gb|AFW62141.1| hypothetical protein ZEAMMB73_911481 [Zea mays]
Length = 700
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 93/353 (26%), Positives = 171/353 (48%), Gaps = 6/353 (1%)
Query: 101 MLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSS 160
+L+ K G KA++V + G P+ V + L+ Y + + A IF +M+S
Sbjct: 339 ILLNGLCKDGKVAKAKQVFEMLVHTGLVPTTVIYNTLINGYCQVRDLRGAFCIFEQMKSR 398
Query: 161 GPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGY 220
RP +TY ++ + +AE++ M + EKS + P + F+ +I Y AG
Sbjct: 399 HIRPDHITYNALINGLCKLEMVTKAEDLVMEM---EKSGVDPSVETFNTLIDAYGTAGQL 455
Query: 221 EKARKLFALMAERGVQQSTVTYNSLM-SFETNYK--EVSKIYDQMQRAGLQPDVVSYALL 277
EK + + M ++G++ +++ S++ +F N K E I D M + P+ Y +
Sbjct: 456 EKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVYNSI 515
Query: 278 INAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRC 337
I+AY ++ E+AL + E+M ++GV + YN+LL S +D+A + +R
Sbjct: 516 IDAYIESGDTEQALLLVEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEELIYTLRNQGL 575
Query: 338 SPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMME 397
PD+ SY T++SA N D + A + + + + G P + T TL+ A + M
Sbjct: 576 RPDVVSYNTIISACCNKGDTDKALELLQEMNKYGIRPTLRTCHTLVSALASAGRVHDMEC 635
Query: 398 IYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKN 450
+Y +M ++P+ +I+ ++DAY + ++ KEM G D ++
Sbjct: 636 LYQQMLHKNVEPSSSIYGIMVDAYVRCENDSKVASLKKEMSEKGIAFDDTKRS 688
Score = 149 bits (375), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 97/388 (25%), Positives = 184/388 (47%), Gaps = 14/388 (3%)
Query: 101 MLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFR---RM 157
++I + G + A KV M G AP+ +++ +++ + +GG + EA FR +M
Sbjct: 199 VVIAGLWRSGKGSDALKVFDEMVDMGVAPNRITYNTMIDGHVKGG---DLEAGFRLRDQM 255
Query: 158 QSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKS-PLKPDQKMFHMMIYMYKK 216
GP+P+ +TY ++L + E L+DE S + PD + ++ +
Sbjct: 256 LHDGPKPNVVTYNVLLSGLCRTGRMDETR----ALMDEMASHSMLPDGFTYSILFDGLTR 311
Query: 217 AGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSK---IYDQMQRAGLQPDVVS 273
G + LFA ++GV T + L++ +V+K +++ + GL P V
Sbjct: 312 TGESQTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAKQVFEMLVHTGLVPTTVI 371
Query: 274 YALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMR 333
Y LIN Y + R A +FE+M +RP H YN L++ MV +A + M
Sbjct: 372 YNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEME 431
Query: 334 RDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLE 393
+ P + ++ T++ AY A +E ++Q G +VI++G+++K + K +
Sbjct: 432 KSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIP 491
Query: 394 KMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILL 453
+ + I D M + PN ++ +I+DAY ++ D + A++ ++M++ G N+LL
Sbjct: 492 EAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQALLLVEKMKNSGVSASIVTYNLLL 551
Query: 454 SLAKTADERNEANELLGNFNHPNNEPGI 481
+ + +EA EL+ + P +
Sbjct: 552 KGLCRSSQIDEAEELIYTLRNQGLRPDV 579
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 120/506 (23%), Positives = 218/506 (43%), Gaps = 55/506 (10%)
Query: 31 WRRLMNQIEEVGS---AVAVLRS-ERTRGQPLPK----DLVLGTLVRL-KQLKKWNVVSE 81
W +++ G A+A+LR R+ G P P ++V+ L R K V E
Sbjct: 160 WNKVVQACVAAGDLDVALAMLRRMGRSEGAPPPDAFSYNVVIAGLWRSGKGSDALKVFDE 219
Query: 82 VLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAY 141
+++ + +N M I + K GD ++ M G P+VV++ L+
Sbjct: 220 MVDMGVAPNRITYNTM-----IDGHVKGGDLEAGFRLRDQMLHDGPKPNVVTYNVLLSGL 274
Query: 142 GRGGRYKNAEAIFRRMQSSGPRPSALTYQII-------------LKLFVEA--------- 179
R GR A+ M S P TY I+ L LF E+
Sbjct: 275 CRTGRMDETRALMDEMASHSMLPDGFTYSILFDGLTRTGESQTMLSLFAESLKKGVMLGA 334
Query: 180 -------------NKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKL 226
K +A++VF L+ + L P +++ +I Y + A +
Sbjct: 335 YTCSILLNGLCKDGKVAKAKQVFEMLV---HTGLVPTTVIYNTLINGYCQVRDLRGAFCI 391
Query: 227 FALMAERGVQQSTVTYNSLMSFETNYKEVSKIYD---QMQRAGLQPDVVSYALLINAYGK 283
F M R ++ +TYN+L++ + V+K D +M+++G+ P V ++ LI+AYG
Sbjct: 392 FEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEMEKSGVDPSVETFNTLIDAYGT 451
Query: 284 ARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICS 343
A + E+ V +M G++ ++ ++ AF +G + +A + M +P+
Sbjct: 452 AGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQV 511
Query: 344 YTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMR 403
Y +++ AY+ + D E A ++K G +++TY L+KG + + +++ E+ +R
Sbjct: 512 YNSIIDAYIESGDTEQALLLVEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEELIYTLR 571
Query: 404 VNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERN 463
G++P+ + TI+ A D D A+ +EM G P + + L+S +A +
Sbjct: 572 NQGLRPDVVSYNTIISACCNKGDTDKALELLQEMNKYGIRPTLRTCHTLVSALASAGRVH 631
Query: 464 EANELLGNFNHPNNEPGINGLSISVD 489
+ L H N EP + I VD
Sbjct: 632 DMECLYQQMLHKNVEPSSSIYGIMVD 657
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 82/349 (23%), Positives = 157/349 (44%), Gaps = 4/349 (1%)
Query: 129 PSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEV 188
PS+ S L+E+ GR+ + A F + ++G RP + +++ V A A +
Sbjct: 120 PSLSSCNLLLESLLFVGRHADVRAAFGLLVAAGARPDTFAWNKVVQACVAAGDLDVALAM 179
Query: 189 FMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSF 248
+ E +P PD ++++I ++G A K+F M + GV + +TYN+++
Sbjct: 180 LRRMGRSEGAP-PPDAFSYNVVIAGLWRSGKGSDALKVFDEMVDMGVAPNRITYNTMIDG 238
Query: 249 ETNYKEVS---KIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPT 305
++ ++ DQM G +P+VV+Y +L++ + R +E A+ +EM + P
Sbjct: 239 HVKGGDLEAGFRLRDQMLHDGPKPNVVTYNVLLSGLCRTGRMDETRALMDEMASHSMLPD 298
Query: 306 HKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFR 365
Y+IL D +G ++F + + + +L+ + A++ F
Sbjct: 299 GFTYSILFDGLTRTGESQTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAKQVFE 358
Query: 366 RLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNK 425
L G VP + Y TLI GY +V +L I+++M+ I+P+ + +++ K +
Sbjct: 359 MLVHTGLVPTTVIYNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLE 418
Query: 426 DFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNH 474
A EME G P + N L+ TA + + +L +
Sbjct: 419 MVTKAEDLVMEMEKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQ 467
>gi|297834714|ref|XP_002885239.1| EMB1270 [Arabidopsis lyrata subsp. lyrata]
gi|297331079|gb|EFH61498.1| EMB1270 [Arabidopsis lyrata subsp. lyrata]
Length = 1429
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 121/470 (25%), Positives = 199/470 (42%), Gaps = 84/470 (17%)
Query: 76 WNVVSEVLEWLRIQSW-----------------WDFNEMDFLMLITA------------- 105
W EV EWL ++ W W+ + + A
Sbjct: 171 WQRALEVFEWLNLRHWHSPNARMVAAILGVLGRWNQESLAVEIFTRAEPTVGDRVQVYNA 230
Query: 106 ----YGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEA-YGRGGRYKNAEA-IFRRMQS 159
Y + G F+KA+++L M ++G P ++S L+ A GG N + +++
Sbjct: 231 MMGVYSRSGKFSKAQELLDAMRQRGCVPDLISFNTLINARLKSGGLTPNLVVELLDMVRN 290
Query: 160 SGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGG 219
SG RP A+TY +L + + A +VF D E +PD ++ MI +Y + G
Sbjct: 291 SGLRPDAITYNTLLSACSRDSNLEGAVKVFE---DMEAHRCQPDLWTYNAMISVYGRCGL 347
Query: 220 YEKARKLFALMAERGVQQSTVTYNSLM---SFETNYKEVSKIYDQMQRAGL--------- 267
+A +LF + +G VTYNSL+ + E N ++V ++Y QMQ+ G
Sbjct: 348 AAEAERLFIELELKGFSPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFGKDEMTYNT 407
Query: 268 ---------------------------QPDVVSYALLINAYGKARREEEALAVFEEMLDA 300
PD ++Y +LI++ GKA R EA A+ EMLD
Sbjct: 408 IIHMYGKQGQLDLALQLYKDMKGLSGRNPDAITYTVLIDSLGKANRSVEAAALMSEMLDV 467
Query: 301 GVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGA 360
G++PT + Y+ L+ +A +G ++A F CM R PD +Y+ ML + ++ A
Sbjct: 468 GIKPTLQTYSALICGYAKAGKREEAEDTFSCMLRSGTKPDNLAYSVMLDVLLRGNETRKA 527
Query: 361 EKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMME-IYDKMRVNGIKPNQTIFTTIMD 419
+R + DG P+ Y +I G K N + + + I D + G+ P + I
Sbjct: 528 WVLYRDMISDGHTPSHSLYELMILGLMKENRSDDVQKTIRDMEELCGMNPLE-----ISS 582
Query: 420 AYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELL 469
K + FD A K + G+ + +L ++ +EA ELL
Sbjct: 583 VLVKGECFDLAARQLKVAITNGYELENDTLLSILGSYSSSGRHSEAFELL 632
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 100/403 (24%), Positives = 185/403 (45%), Gaps = 35/403 (8%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
+I AYGK + KAE V+ + + G P + + +LM AY G Y+ A AIF M G
Sbjct: 758 IIEAYGKLKLWQKAESVVGNLRQSGRTPDLKTWNSLMSAYAECGCYERARAIFNTMMRDG 817
Query: 162 PRPSALTYQIIL----------KLFVEANK-----FKEAEEVFMTLLD------------ 194
P P+ + +L +L+V + FK ++ + +LD
Sbjct: 818 PSPTVESINKLLHALCVDGRLEELYVVVEELQDMGFKISKSSILLMLDAFARAGNIFEVN 877
Query: 195 EEKSPLK-----PDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFE 249
+ S +K P +++ MMI + K A + + M E + +NS++
Sbjct: 878 KIYSSMKAAGYLPTIRLYRMMIELLCKGKRVRDAEIMVSEMEEANFKVELAIWNSMLKMY 937
Query: 250 T---NYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTH 306
T +YK+ ++Y +++ +GL+PD +Y LI Y + RR EE ++ ++M + G+ P
Sbjct: 938 TVIEDYKKTVQVYQRIKESGLEPDETTYNTLIIMYCRDRRPEEGYSLMQQMRNLGLDPKL 997
Query: 307 KAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRR 366
Y L+ AF ++QA +F+ + D Y TM+ ++ AEK +
Sbjct: 998 DTYKSLISAFGKQKCLEQAEQLFEELLSKGLKLDRSFYHTMMKISRDSGSDSKAEKLLQM 1057
Query: 367 LKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKD 426
+K G P + T L+ Y+ N ++ ++ ++ ++ +++++DAY ++KD
Sbjct: 1058 MKNAGIEPTLATMHLLMVSYSSSGNPQEAEKVLSNLKNTEVELTTLPYSSVIDAYLRSKD 1117
Query: 427 FDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELL 469
+ S + EM+ G PD + + A + E++E LL
Sbjct: 1118 YKSGIERLLEMKKEGLEPDHRIWTCFVRAASFSKEKSEVMLLL 1160
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 88/409 (21%), Positives = 188/409 (45%), Gaps = 42/409 (10%)
Query: 72 QLKKWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSV 131
+LK W V+ LR QS + + L++AY + G + +A + + M + G +P+V
Sbjct: 764 KLKLWQKAESVVGNLR-QSGRTPDLKTWNSLMSAYAECGCYERARAIFNTMMRDGPSPTV 822
Query: 132 VSHTALM-----------------------------------EAYGRGGRYKNAEAIFRR 156
S L+ +A+ R G I+
Sbjct: 823 ESINKLLHALCVDGRLEELYVVVEELQDMGFKISKSSILLMLDAFARAGNIFEVNKIYSS 882
Query: 157 MQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKK 216
M+++G P+ Y+++++L + + ++AE + + + E++ K + +++ M+ MY
Sbjct: 883 MKAAGYLPTIRLYRMMIELLCKGKRVRDAE---IMVSEMEEANFKVELAIWNSMLKMYTV 939
Query: 217 AGGYEKARKLFALMAERGVQQSTVTYNSLMSF---ETNYKEVSKIYDQMQRAGLQPDVVS 273
Y+K +++ + E G++ TYN+L+ + +E + QM+ GL P + +
Sbjct: 940 IEDYKKTVQVYQRIKESGLEPDETTYNTLIIMYCRDRRPEEGYSLMQQMRNLGLDPKLDT 999
Query: 274 YALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMR 333
Y LI+A+GK + E+A +FEE+L G++ Y+ ++ SG +A + + M+
Sbjct: 1000 YKSLISAFGKQKCLEQAEQLFEELLSKGLKLDRSFYHTMMKISRDSGSDSKAEKLLQMMK 1059
Query: 334 RDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLE 393
P + + ++ +Y ++ + + AEK LK + Y ++I Y + + +
Sbjct: 1060 NAGIEPTLATMHLLMVSYSSSGNPQEAEKVLSNLKNTEVELTTLPYSSVIDAYLRSKDYK 1119
Query: 394 KMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGF 442
+E +M+ G++P+ I+T + A +K+ ++ K ++ GF
Sbjct: 1120 SGIERLLEMKKEGLEPDHRIWTCFVRAASFSKEKSEVMLLLKALQDIGF 1168
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 81/379 (21%), Positives = 174/379 (45%), Gaps = 7/379 (1%)
Query: 112 FNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPR-PSALTYQ 170
+ +A +V S + G PS +++ Y + G + A + + ++ G + Y
Sbjct: 697 YAEASQVFSELRLSGCEPSESVCKSMVVVYCKLGFPETAYQVVNQAETKGFHFACSPMYT 756
Query: 171 IILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALM 230
I++ + + +++AE V L +S PD K ++ ++ Y + G YE+AR +F M
Sbjct: 757 DIIEAYGKLKLWQKAESVVGNL---RQSGRTPDLKTWNSLMSAYAECGCYERARAIFNTM 813
Query: 231 AERGVQQSTVTYNSLM---SFETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARRE 287
G + + N L+ + +E+ + +++Q G + S L+++A+ +A
Sbjct: 814 MRDGPSPTVESINKLLHALCVDGRLEELYVVVEELQDMGFKISKSSILLMLDAFARAGNI 873
Query: 288 EEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTM 347
E ++ M AG PT + Y ++++ V A + M ++ + +M
Sbjct: 874 FEVNKIYSSMKAAGYLPTIRLYRMMIELLCKGKRVRDAEIMVSEMEEANFKVELAIWNSM 933
Query: 348 LSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGI 407
L Y D + + ++R+K+ G P+ TY TLI Y + E+ + +MR G+
Sbjct: 934 LKMYTVIEDYKKTVQVYQRIKESGLEPDETTYNTLIIMYCRDRRPEEGYSLMQQMRNLGL 993
Query: 408 KPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANE 467
P + +++ A+GK K + A ++E+ S G D+ + ++ +++ + ++A +
Sbjct: 994 DPKLDTYKSLISAFGKQKCLEQAEQLFEELLSKGLKLDRSFYHTMMKISRDSGSDSKAEK 1053
Query: 468 LLGNFNHPNNEPGINGLSI 486
LL + EP + + +
Sbjct: 1054 LLQMMKNAGIEPTLATMHL 1072
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 82/423 (19%), Positives = 158/423 (37%), Gaps = 52/423 (12%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
LI Y K G +AE S M + G P ++++ +++ RG + A ++R M S G
Sbjct: 479 LICGYAKAGKREEAEDTFSCMLRSGTKPDNLAYSVMLDVLLRGNETRKAWVLYRDMISDG 538
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEK----SPLKPDQKMFH--------- 208
PS Y++++ ++ N+ +++V T+ D E+ +PL+ +
Sbjct: 539 HTPSHSLYELMILGLMKENR---SDDVQKTIRDMEELCGMNPLEISSVLVKGECFDLAAR 595
Query: 209 ------------------MMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFET 250
++ Y +G + +A +L + E + +L+
Sbjct: 596 QLKVAITNGYELENDTLLSILGSYSSSGRHSEAFELLEFLKEHASGSKRLINEALIVLHC 655
Query: 251 NYKEVSKIYDQMQRAGLQPDV--------VSYALLINAYGKARREEEALAVFEEMLDAGV 302
+ D+ P V Y L++ EA VF E+ +G
Sbjct: 656 KVNNIGAALDEYLA---DPCVHGWCFGGSTMYETLLHCCVANEHYAEASQVFSELRLSGC 712
Query: 303 RPTHKAYNILLDAFAISGMVDQARTVFKCMRRD----RCSPDICSYTTMLSAYVNASDME 358
P+ ++ + G + A V CSP YT ++ AY +
Sbjct: 713 EPSESVCKSMVVVYCKLGFPETAYQVVNQAETKGFHFACSP---MYTDIIEAYGKLKLWQ 769
Query: 359 GAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIM 418
AE L+Q G P++ T+ +L+ YA+ E+ I++ M +G P ++
Sbjct: 770 KAESVVGNLRQSGRTPDLKTWNSLMSAYAECGCYERARAIFNTMMRDGPSPTVESINKLL 829
Query: 419 DAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNE 478
A + + V +E++ GF + + ++L A E N++ +
Sbjct: 830 HALCVDGRLEELYVVVEELQDMGFKISKSSILLMLDAFARAGNIFEVNKIYSSMKAAGYL 889
Query: 479 PGI 481
P I
Sbjct: 890 PTI 892
>gi|302770783|ref|XP_002968810.1| hypothetical protein SELMODRAFT_91015 [Selaginella moellendorffii]
gi|300163315|gb|EFJ29926.1| hypothetical protein SELMODRAFT_91015 [Selaginella moellendorffii]
Length = 545
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 104/414 (25%), Positives = 186/414 (44%), Gaps = 41/414 (9%)
Query: 97 MDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRR 156
+ + L+ K G ++A VL M +KG +P++ ++T +++ + GR + A IF
Sbjct: 78 VTYTALVDGLLKAGRLDEAMAVLEQMVEKGNSPTLKTYTVVIDGLSKAGRVEEARRIFVD 137
Query: 157 MQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTL-LDEEKSPLKPDQKMFHMMIYMYK 215
M +G RP A Y ++K ++ K +EA ++ + + PD + +I
Sbjct: 138 MLGNGCRPDAFVYTALIKGLCKSGKPEEAYALYKEANARKHHATAVPDVVTYTSLIDGLC 197
Query: 216 KAGGYEKARKLFALMA-ERGVQQSTVTYNSLMSFETNYKEV---SKIYDQMQRAGLQPDV 271
KAG +AR++F A ERG VTY S++ V + + +M+ G +PD
Sbjct: 198 KAGRILEARQVFDDEAVERGFIPDAVTYTSIIDGLCKLGRVEEGCERFHEMRNRGYEPDA 257
Query: 272 VSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKC 331
V+YA LI+ + KA+ +A V+ +ML +G + YNI+LD +G V +A F
Sbjct: 258 VTYAALIDGFMKAKMIPKAHRVYRQMLQSGTVVSTVTYNIILDGLCKAGRVAEAYATFLA 317
Query: 332 MRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNN 391
M C + +Y+ ++ + + ++ A + FRR+ G PN+++Y +I+G +
Sbjct: 318 MEERGCVATVVTYSALMDGFCSEGNVSAAVELFRRMLDRGCEPNLVSYNIIIRGLCRAGK 377
Query: 392 LEKM------------------------------------MEIYDKMRVNGIKPNQTIFT 415
L K +E+++ M G PN ++
Sbjct: 378 LAKAYFYFEKLLQRRLCPDVYTFNAFLHGLCQRLDTVSDGVELFESMVSQGTSPNLHSYS 437
Query: 416 TIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELL 469
+MD + + A+ ++EM S G PD N L+ A +EA E+
Sbjct: 438 ILMDGICRAGGLEVALEIFREMVSRGVAPDVVVFNTLIRWLCIAGRVDEALEVF 491
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 81/348 (23%), Positives = 162/348 (46%), Gaps = 9/348 (2%)
Query: 102 LITAYGKQGDFNKAEKVLS-FMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSS 160
LI K G +A +V ++G+ P V++T++++ + GR + F M++
Sbjct: 192 LIDGLCKAGRILEARQVFDDEAVERGFIPDAVTYTSIIDGLCKLGRVEEGCERFHEMRNR 251
Query: 161 GPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGY 220
G P A+TY ++ F++A +A V+ +L +S +++++ KAG
Sbjct: 252 GYEPDAVTYAALIDGFMKAKMIPKAHRVYRQML---QSGTVVSTVTYNIILDGLCKAGRV 308
Query: 221 EKARKLFALMAERGVQQSTVTYNSLM---SFETNYKEVSKIYDQMQRAGLQPDVVSYALL 277
+A F M ERG + VTY++LM E N +++ +M G +P++VSY ++
Sbjct: 309 AEAYATFLAMEERGCVATVVTYSALMDGFCSEGNVSAAVELFRRMLDRGCEPNLVSYNII 368
Query: 278 INAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAIS-GMVDQARTVFKCMRRDR 336
I +A + +A FE++L + P +N L V +F+ M
Sbjct: 369 IRGLCRAGKLAKAYFYFEKLLQRRLCPDVYTFNAFLHGLCQRLDTVSDGVELFESMVSQG 428
Query: 337 CSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMM 396
SP++ SY+ ++ A +E A + FR + G P+V+ + TLI+ +++ +
Sbjct: 429 TSPNLHSYSILMDGICRAGGLEVALEIFREMVSRGVAPDVVVFNTLIRWLCIAGRVDEAL 488
Query: 397 EIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPP 444
E++ ++ P+ + +++D + + + A + M+ G P
Sbjct: 489 EVFRELERRS-APDAWSYWSLLDGLSRCERMEEARLLSFHMKLQGCAP 535
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 75/287 (26%), Positives = 132/287 (45%), Gaps = 8/287 (2%)
Query: 92 WDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAE 151
++ + + + LI + K KA +V M + G S V++ +++ + GR A
Sbjct: 253 YEPDAVTYAALIDGFMKAKMIPKAHRVYRQMLQSGTVVSTVTYNIILDGLCKAGRVAEAY 312
Query: 152 AIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMI 211
A F M+ G + +TY ++ F A E+F +LD +P+ ++++I
Sbjct: 313 ATFLAMEERGCVATVVTYSALMDGFCSEGNVSAAVELFRRMLDR---GCEPNLVSYNIII 369
Query: 212 YMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLM-SFETNYKEVS---KIYDQMQRAGL 267
+AG KA F + +R + T+N+ + VS ++++ M G
Sbjct: 370 RGLCRAGKLAKAYFYFEKLLQRRLCPDVYTFNAFLHGLCQRLDTVSDGVELFESMVSQGT 429
Query: 268 QPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQART 327
P++ SY++L++ +A E AL +F EM+ GV P +N L+ I+G VD+A
Sbjct: 430 SPNLHSYSILMDGICRAGGLEVALEIFREMVSRGVAPDVVVFNTLIRWLCIAGRVDEALE 489
Query: 328 VFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVP 374
VF+ + R R +PD SY ++L ME A +K G P
Sbjct: 490 VFRELER-RSAPDAWSYWSLLDGLSRCERMEEARLLSFHMKLQGCAP 535
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/247 (26%), Positives = 107/247 (43%), Gaps = 41/247 (16%)
Query: 239 TVTYNSLMSFETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARRE----------- 287
TV N L E E + ++ RAG +PD V+Y + I+ KA R
Sbjct: 11 TVVINGLCR-EKRLDEAFSVLERAVRAGCEPDYVTYNVFIDGLCKAERVDDAFQLLKKMD 69
Query: 288 ------------------------EEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVD 323
+EA+AV E+M++ G PT K Y +++D + +G V+
Sbjct: 70 EKKCLPTTVTYTALVDGLLKAGRLDEAMAVLEQMVEKGNSPTLKTYTVVIDGLSKAGRVE 129
Query: 324 QARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFR----RLKQDGFVPNVITY 379
+AR +F M + C PD YT ++ + E A ++ R VP+V+TY
Sbjct: 130 EARRIFVDMLGNGCRPDAFVYTALIKGLCKSGKPEEAYALYKEANARKHHATAVPDVVTY 189
Query: 380 GTLIKGYAKVNNLEKMMEIYDKMRV-NGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEME 438
+LI G K + + +++D V G P+ +T+I+D K + + EM
Sbjct: 190 TSLIDGLCKAGRILEARQVFDDEAVERGFIPDAVTYTSIIDGLCKLGRVEEGCERFHEMR 249
Query: 439 SCGFPPD 445
+ G+ PD
Sbjct: 250 NRGYEPD 256
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 85/169 (50%)
Query: 268 QPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQART 327
PD+V++ ++IN + +R +EA +V E + AG P + YN+ +D + VD A
Sbjct: 4 SPDMVAFTVVINGLCREKRLDEAFSVLERAVRAGCEPDYVTYNVFIDGLCKAERVDDAFQ 63
Query: 328 VFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYA 387
+ K M +C P +YT ++ + A ++ A ++ + G P + TY +I G +
Sbjct: 64 LLKKMDEKKCLPTTVTYTALVDGLLKAGRLDEAMAVLEQMVEKGNSPTLKTYTVVIDGLS 123
Query: 388 KVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKE 436
K +E+ I+ M NG +P+ ++T ++ K+ + A YKE
Sbjct: 124 KAGRVEEARRIFVDMLGNGCRPDAFVYTALIKGLCKSGKPEEAYALYKE 172
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 70/256 (27%), Positives = 120/256 (46%), Gaps = 8/256 (3%)
Query: 88 IQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRY 147
+QS + + + +++ K G +A M ++G +VV+++ALM+ + G
Sbjct: 284 LQSGTVVSTVTYNIILDGLCKAGRVAEAYATFLAMEERGCVATVVTYSALMDGFCSEGNV 343
Query: 148 KNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMF 207
A +FRRM G P+ ++Y II++ A K +A F LL L PD F
Sbjct: 344 SAAVELFRRMLDRGCEPNLVSYNIIIRGLCRAGKLAKAYFYFEKLLQRR---LCPDVYTF 400
Query: 208 HMMIY-MYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMS--FETNYKEVS-KIYDQMQ 263
+ ++ + ++ +LF M +G + +Y+ LM EV+ +I+ +M
Sbjct: 401 NAFLHGLCQRLDTVSDGVELFESMVSQGTSPNLHSYSILMDGICRAGGLEVALEIFREMV 460
Query: 264 RAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVD 323
G+ PDVV + LI A R +EAL VF E L+ P +Y LLD + ++
Sbjct: 461 SRGVAPDVVVFNTLIRWLCIAGRVDEALEVFRE-LERRSAPDAWSYWSLLDGLSRCERME 519
Query: 324 QARTVFKCMRRDRCSP 339
+AR + M+ C+P
Sbjct: 520 EARLLSFHMKLQGCAP 535
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/150 (21%), Positives = 65/150 (43%)
Query: 304 PTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKF 363
P A+ ++++ +D+A +V + R C PD +Y + A ++ A +
Sbjct: 5 PDMVAFTVVINGLCREKRLDEAFSVLERAVRAGCEPDYVTYNVFIDGLCKAERVDDAFQL 64
Query: 364 FRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGK 423
+++ + +P +TY L+ G K L++ M + ++M G P +T ++D K
Sbjct: 65 LKKMDEKKCLPTTVTYTALVDGLLKAGRLDEAMAVLEQMVEKGNSPTLKTYTVVIDGLSK 124
Query: 424 NKDFDSAVVWYKEMESCGFPPDQKAKNILL 453
+ A + +M G PD L+
Sbjct: 125 AGRVEEARRIFVDMLGNGCRPDAFVYTALI 154
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/144 (22%), Positives = 60/144 (41%), Gaps = 4/144 (2%)
Query: 337 CSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMM 396
CSPD+ ++T +++ ++ A R + G P+ +TY I G K ++
Sbjct: 3 CSPDMVAFTVVINGLCREKRLDEAFSVLERAVRAGCEPDYVTYNVFIDGLCKAERVDDAF 62
Query: 397 EIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLA 456
++ KM P +T ++D K D A+ ++M G P K +++
Sbjct: 63 QLLKKMDEKKCLPTTVTYTALVDGLLKAGRLDEAMAVLEQMVEKGNSPTLKTYTVVIDGL 122
Query: 457 KTADERNEAN----ELLGNFNHPN 476
A EA ++LGN P+
Sbjct: 123 SKAGRVEEARRIFVDMLGNGCRPD 146
>gi|242067349|ref|XP_002448951.1| hypothetical protein SORBIDRAFT_05g002310 [Sorghum bicolor]
gi|241934794|gb|EES07939.1| hypothetical protein SORBIDRAFT_05g002310 [Sorghum bicolor]
Length = 799
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 86/329 (26%), Positives = 158/329 (48%), Gaps = 6/329 (1%)
Query: 129 PSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEV 188
P+VVS++ ++ + G+ +F M G P +TY ++ +A F AE V
Sbjct: 197 PNVVSYSIVINGFFTEGQVDKPYNLFLEMIDRGIPPDVVTYTTVIDGLCKAQLFDRAEGV 256
Query: 189 FMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSF 248
F ++D + KP+ ++ +I+ Y G +++ ++ M+ RG++ TY SL+++
Sbjct: 257 FQQMID---NGFKPNNYTYNCLIHGYLSIGKWKEVVQMLEEMSARGLKPDCYTYGSLLNY 313
Query: 249 ETN---YKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPT 305
+E +D M R G++P V +Y +LI+ Y E + + M++ G+ P
Sbjct: 314 LCKNGRCREARFFFDSMIRKGIKPKVSTYGILIHGYATKGALSEMHSFLDLMVENGLSPD 373
Query: 306 HKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFR 365
H +NI A+A GM+D+A +F MR+ SP++ +Y ++ A ++ AE F
Sbjct: 374 HHIFNIFFSAYAKCGMIDKAMDIFNKMRQHGLSPNVVNYGALIDALCKLGRVDDAEVKFN 433
Query: 366 RLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNK 425
++ +G PN++ + +L+ G V+ E+ E+ +M GI PN F T++
Sbjct: 434 QMINEGVTPNIVVFNSLVYGLCTVDKWERAEELVYEMLDQGICPNAVFFNTLICNLCNVG 493
Query: 426 DFDSAVVWYKEMESCGFPPDQKAKNILLS 454
ME G PD + L+S
Sbjct: 494 RVMEGRRLIDLMEHVGVRPDAFSYTPLIS 522
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 101/408 (24%), Positives = 183/408 (44%), Gaps = 41/408 (10%)
Query: 99 FLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQ 158
F + +AY K G +KA + + M + G +P+VV++ AL++A + GR +AE F +M
Sbjct: 377 FNIFFSAYAKCGMIDKAMDIFNKMRQHGLSPNVVNYGALIDALCKLGRVDDAEVKFNQMI 436
Query: 159 SSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAG 218
+ G P+ + + ++ +K++ AEE+ +LD+ + P+ F+ +I G
Sbjct: 437 NEGVTPNIVVFNSLVYGLCTVDKWERAEELVYEMLDQG---ICPNAVFFNTLICNLCNVG 493
Query: 219 GYEKARKLFALMAERGVQQSTVTYNSLMS---FETNYKEVSKIYDQMQRAGLQPDVVSYA 275
+ R+L LM GV+ +Y L+S E K++D M GL P V+Y
Sbjct: 494 RVMEGRRLIDLMEHVGVRPDAFSYTPLISGYCLTGRTDEAEKVFDGMVSIGLSPTEVTYN 553
Query: 276 LLINAYGKARREEEALAVFEEMLDAGVRP---THKA------------------------ 308
L++ Y A R ++A +F EML GV P T+
Sbjct: 554 TLLHGYCSASRIDDAYCLFREMLRKGVTPGVVTYNTILHGLFQTKRFSEAKELYLNMINS 613
Query: 309 --------YNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGA 360
YNI+L+ S VD+A +F+ + +I ++T M+ A + E A
Sbjct: 614 GTKCDIYTYNIILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFTIMIGALLKGGRKEDA 673
Query: 361 EKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDA 420
F + +G VPNV+TY + + + +LE+ ++ M NG PN + ++
Sbjct: 674 MDLFAAIPANGLVPNVVTYRLVAENLIEEGSLEEFDSLFSAMEKNGTAPNSQMLNALVRR 733
Query: 421 YGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANEL 468
D A + +++ F + ++L+S+ + + ++ A L
Sbjct: 734 LLHRGDISRAGAYLSKLDERNFSVEASTTSLLMSIFTSDEYQHHAKSL 781
Score = 138 bits (347), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 116/474 (24%), Positives = 201/474 (42%), Gaps = 27/474 (5%)
Query: 28 KKNWRR---LMNQI-------EEVGSAVAVLRSERTRGQPLPKDLVLGTLVRLKQLKKWN 77
K WR +NQ+ + VG A+ VL +P D V T++ LK L
Sbjct: 118 KTGWRMDHIAINQLLKGLCHGKRVGEAMDVLLQRMPELGCMP-DTVSYTIL-LKGLCNEK 175
Query: 78 VVSEVLEWLRIQS-----WWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVV 132
E LE L + + N + + ++I + +G +K + M +G P VV
Sbjct: 176 RAEEALELLHMMADDHGRRCPPNVVSYSIVINGFFTEGQVDKPYNLFLEMIDRGIPPDVV 235
Query: 133 SHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTL 192
++T +++ + + AE +F++M +G +P+ TY ++ ++ K+KE ++
Sbjct: 236 TYTTVIDGLCKAQLFDRAEGVFQQMIDNGFKPNNYTYNCLIHGYLSIGKWKEVVQML--- 292
Query: 193 LDEEKSP--LKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLM---S 247
EE S LKPD + ++ K G +AR F M +G++ TY L+ +
Sbjct: 293 --EEMSARGLKPDCYTYGSLLNYLCKNGRCREARFFFDSMIRKGIKPKVSTYGILIHGYA 350
Query: 248 FETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHK 307
+ E+ D M GL PD + + +AY K ++A+ +F +M G+ P
Sbjct: 351 TKGALSEMHSFLDLMVENGLSPDHHIFNIFFSAYAKCGMIDKAMDIFNKMRQHGLSPNVV 410
Query: 308 AYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRL 367
Y L+DA G VD A F M + +P+I + +++ E AE+ +
Sbjct: 411 NYGALIDALCKLGRVDDAEVKFNQMINEGVTPNIVVFNSLVYGLCTVDKWERAEELVYEM 470
Query: 368 KQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDF 427
G PN + + TLI V + + + D M G++P+ +T ++ Y
Sbjct: 471 LDQGICPNAVFFNTLICNLCNVGRVMEGRRLIDLMEHVGVRPDAFSYTPLISGYCLTGRT 530
Query: 428 DSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGI 481
D A + M S G P + N LL +A ++A L PG+
Sbjct: 531 DEAEKVFDGMVSIGLSPTEVTYNTLLHGYCSASRIDDAYCLFREMLRKGVTPGV 584
Score = 138 bits (347), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 91/379 (24%), Positives = 166/379 (43%), Gaps = 4/379 (1%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNA-EAI 153
N + +LI + + G + K G+ ++ L++ G R A + +
Sbjct: 89 NLCTYSILIGRFCRMGHLEHGFAAFGLILKTGWRMDHIAINQLLKGLCHGKRVGEAMDVL 148
Query: 154 FRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYM 213
+RM G P ++Y I+LK + +EA E+ + D+ P+ + ++I
Sbjct: 149 LQRMPELGCMPDTVSYTILLKGLCNEKRAEEALELLHMMADDHGRRCPPNVVSYSIVING 208
Query: 214 YKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETN---YKEVSKIYDQMQRAGLQPD 270
+ G +K LF M +RG+ VTY +++ + ++ QM G +P+
Sbjct: 209 FFTEGQVDKPYNLFLEMIDRGIPPDVVTYTTVIDGLCKAQLFDRAEGVFQQMIDNGFKPN 268
Query: 271 VVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFK 330
+Y LI+ Y + +E + + EEM G++P Y LL+ +G +AR F
Sbjct: 269 NYTYNCLIHGYLSIGKWKEVVQMLEEMSARGLKPDCYTYGSLLNYLCKNGRCREARFFFD 328
Query: 331 CMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVN 390
M R P + +Y ++ Y + F + ++G P+ + YAK
Sbjct: 329 SMIRKGIKPKVSTYGILIHGYATKGALSEMHSFLDLMVENGLSPDHHIFNIFFSAYAKCG 388
Query: 391 NLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKN 450
++K M+I++KMR +G+ PN + ++DA K D A V + +M + G P+ N
Sbjct: 389 MIDKAMDIFNKMRQHGLSPNVVNYGALIDALCKLGRVDDAEVKFNQMINEGVTPNIVVFN 448
Query: 451 ILLSLAKTADERNEANELL 469
L+ T D+ A EL+
Sbjct: 449 SLVYGLCTVDKWERAEELV 467
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 96/396 (24%), Positives = 163/396 (41%), Gaps = 41/396 (10%)
Query: 97 MDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRR 156
+ + +I K F++AE V M G+ P+ ++ L+ Y G++K +
Sbjct: 235 VTYTTVIDGLCKAQLFDRAEGVFQQMIDNGFKPNNYTYNCLIHGYLSIGKWKEVVQMLEE 294
Query: 157 MQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKK 216
M + G +P TY +L + + +EA F +++ + +KP + ++I+ Y
Sbjct: 295 MSARGLKPDCYTYGSLLNYLCKNGRCREARFFFDSMI---RKGIKPKVSTYGILIHGYAT 351
Query: 217 AGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSK---IYDQMQRAGLQPDVVS 273
G + LM E G+ +N S + K I+++M++ GL P+VV+
Sbjct: 352 KGALSEMHSFLDLMVENGLSPDHHIFNIFFSAYAKCGMIDKAMDIFNKMRQHGLSPNVVN 411
Query: 274 YALLINAYGKARREEEA---------------LAVFE--------------------EML 298
Y LI+A K R ++A + VF EML
Sbjct: 412 YGALIDALCKLGRVDDAEVKFNQMINEGVTPNIVVFNSLVYGLCTVDKWERAEELVYEML 471
Query: 299 DAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDME 358
D G+ P +N L+ G V + R + M PD SYT ++S Y +
Sbjct: 472 DQGICPNAVFFNTLICNLCNVGRVMEGRRLIDLMEHVGVRPDAFSYTPLISGYCLTGRTD 531
Query: 359 GAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIM 418
AEK F + G P +TY TL+ GY + ++ ++ +M G+ P + TI+
Sbjct: 532 EAEKVFDGMVSIGLSPTEVTYNTLLHGYCSASRIDDAYCLFREMLRKGVTPGVVTYNTIL 591
Query: 419 DAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLS 454
+ K F A Y M + G D NI+L+
Sbjct: 592 HGLFQTKRFSEAKELYLNMINSGTKCDIYTYNIILN 627
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 103/412 (25%), Positives = 179/412 (43%), Gaps = 23/412 (5%)
Query: 81 EVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKK------GYAPSVVSH 134
E+L R S FN L+TA + + +E +S N+ AP++ ++
Sbjct: 39 ELLHHARPASVRAFNH-----LLTAVSRARCSSASELAVSHFNRMVRECSDKVAPNLCTY 93
Query: 135 TALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLD 194
+ L+ + R G ++ A F + +G R + +LK + EA +V + +
Sbjct: 94 SILIGRFCRMGHLEHGFAAFGLILKTGWRMDHIAINQLLKGLCHGKRVGEAMDVLLQRMP 153
Query: 195 EEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAE---RGVQQSTVTYNSLMSFETN 251
E PD + +++ E+A +L +MA+ R + V+Y+ +++
Sbjct: 154 ELGC--MPDTVSYTILLKGLCNEKRAEEALELLHMMADDHGRRCPPNVVSYSIVINGFFT 211
Query: 252 YKEVSKIYD---QMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKA 308
+V K Y+ +M G+ PDVV+Y +I+ KA+ + A VF++M+D G +P +
Sbjct: 212 EGQVDKPYNLFLEMIDRGIPPDVVTYTTVIDGLCKAQLFDRAEGVFQQMIDNGFKPNNYT 271
Query: 309 YNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLK 368
YN L+ + G + + + M PD +Y ++L+ A FF +
Sbjct: 272 YNCLIHGYLSIGKWKEVVQMLEEMSARGLKPDCYTYGSLLNYLCKNGRCREARFFFDSMI 331
Query: 369 QDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFD 428
+ G P V TYG LI GYA L +M D M NG+ P+ IF AY K D
Sbjct: 332 RKGIKPKVSTYGILIHGYATKGALSEMHSFLDLMVENGLSPDHHIFNIFFSAYAKCGMID 391
Query: 429 SAVVWYKEMESCGFPPD----QKAKNILLSLAKTADERNEANELLGNFNHPN 476
A+ + +M G P+ + L L + D + N+++ PN
Sbjct: 392 KAMDIFNKMRQHGLSPNVVNYGALIDALCKLGRVDDAEVKFNQMINEGVTPN 443
Score = 46.6 bits (109), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 47/246 (19%), Positives = 91/246 (36%), Gaps = 80/246 (32%)
Query: 288 EEALAVFEEMLDAGVRPTHKAYNILLDAFA---ISGMVDQARTVFKCMRR---DRCSPDI 341
++AL +F+E+L + +A+N LL A + S + A + F M R D+ +P++
Sbjct: 31 DDALKLFDELLHHARPASVRAFNHLLTAVSRARCSSASELAVSHFNRMVRECSDKVAPNL 90
Query: 342 CSYTTMLSAYVNASDM------------------------------------EGAEKFFR 365
C+Y+ ++ + + E + +
Sbjct: 91 CTYSILIGRFCRMGHLEHGFAAFGLILKTGWRMDHIAINQLLKGLCHGKRVGEAMDVLLQ 150
Query: 366 RLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMR-----------------VN--- 405
R+ + G +P+ ++Y L+KG E+ +E+ M +N
Sbjct: 151 RMPELGCMPDTVSYTILLKGLCNEKRAEEALELLHMMADDHGRRCPPNVVSYSIVINGFF 210
Query: 406 ------------------GIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQK 447
GI P+ +TT++D K + FD A +++M GF P+
Sbjct: 211 TEGQVDKPYNLFLEMIDRGIPPDVVTYTTVIDGLCKAQLFDRAEGVFQQMIDNGFKPNNY 270
Query: 448 AKNILL 453
N L+
Sbjct: 271 TYNCLI 276
>gi|224130936|ref|XP_002320961.1| predicted protein [Populus trichocarpa]
gi|222861734|gb|EEE99276.1| predicted protein [Populus trichocarpa]
Length = 474
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 107/416 (25%), Positives = 195/416 (46%), Gaps = 15/416 (3%)
Query: 44 AVAVLRSERTRGQPLPKDL----VLGTLVRLKQLKKWNVVSEVLEWLRIQSWWDFNEMDF 99
A+A R R +PLP + + ++VR+ + +S+ +E+L I+ D + +
Sbjct: 46 ALASFRLMLLR-KPLPCIVEFSKLFSSIVRMGHYETVVYLSKEIEFLGIEQ--DIHSLSI 102
Query: 100 LMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQS 159
L+ + + DF + VLS + K G PS+V+ T L+ G+ ++ M
Sbjct: 103 LINCFCHLHRVDFGLS--VLSKILKLGLEPSIVTFTTLLNGLCMEGKMDQVMMLYDDMLV 160
Query: 160 SGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGG 219
G +P+ TY +I+ ++ K A E L EK P+ + +I Y G
Sbjct: 161 RGLQPNVYTYNVIINSLSKSGK---ANEALGFLKQMEKVGCVPNVVNYSTLIDGYCLRGQ 217
Query: 220 YEKARKLFALMAERGVQQSTVTYNSLMSFETNYK---EVSKIYDQMQRAGLQPDVVSYAL 276
++AR +F LM +G + TY SLM+ + E ++ D+ R GL PD+V++
Sbjct: 218 MDEARSVFDLMVSKGCTPNVYTYTSLMNGYCKIERIEEAVQLLDETLRKGLVPDIVTFTT 277
Query: 277 LINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDR 336
+I+ +A R A +F + G P Y +LLD G +++A +F+ M+R
Sbjct: 278 IISGLCRAGRPLAAQQLFRYICAHGHTPNIMTYGVLLDGLCKHGNLEEAFALFQEMQRST 337
Query: 337 CSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMM 396
P++ YT ++ + ++ ++ F RL +G PNV TY L+ K + +
Sbjct: 338 VKPNLVIYTILIDSLCKCGKIKDGKELFSRLIDEGLKPNVYTYTALVGALCKEGLIIEAH 397
Query: 397 EIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNIL 452
+++ KM +G P++ + I+ + ++KD A +EM + GF D + +L
Sbjct: 398 KLFRKMEEDGCTPDKCAYNVIIQGFLQHKDPSMARQLVEEMVNRGFSADAATRALL 453
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 78/315 (24%), Positives = 149/315 (47%), Gaps = 7/315 (2%)
Query: 149 NAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFH 208
+A A FR M P P + + KLF + E V + E ++ D
Sbjct: 45 DALASFRLMLLRKPLPCIVEFS---KLFSSIVRMGHYETVVYLSKEIEFLGIEQDIHSLS 101
Query: 209 MMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLM---SFETNYKEVSKIYDQMQRA 265
++I + + + + + + G++ S VT+ +L+ E +V +YD M
Sbjct: 102 ILINCFCHLHRVDFGLSVLSKILKLGLEPSIVTFTTLLNGLCMEGKMDQVMMLYDDMLVR 161
Query: 266 GLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQA 325
GLQP+V +Y ++IN+ K+ + EAL ++M G P Y+ L+D + + G +D+A
Sbjct: 162 GLQPNVYTYNVIINSLSKSGKANEALGFLKQMEKVGCVPNVVNYSTLIDGYCLRGQMDEA 221
Query: 326 RTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKG 385
R+VF M C+P++ +YT++++ Y +E A + + G VP+++T+ T+I G
Sbjct: 222 RSVFDLMVSKGCTPNVYTYTSLMNGYCKIERIEEAVQLLDETLRKGLVPDIVTFTTIISG 281
Query: 386 YAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPD 445
+ +++ + +G PN + ++D K+ + + A ++EM+ P+
Sbjct: 282 LCRAGRPLAAQQLFRYICAHGHTPNIMTYGVLLDGLCKHGNLEEAFALFQEMQRSTVKPN 341
Query: 446 QKAKNILL-SLAKTA 459
IL+ SL K
Sbjct: 342 LVIYTILIDSLCKCG 356
Score = 58.9 bits (141), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 39/187 (20%), Positives = 78/187 (41%), Gaps = 32/187 (17%)
Query: 97 MDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRR 156
+ F +I+ + G A+++ ++ G+ P+++++ L++ + G + A A+F+
Sbjct: 273 VTFTTIISGLCRAGRPLAAQQLFRYICAHGHTPNIMTYGVLLDGLCKHGNLEEAFALFQE 332
Query: 157 MQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSP----------------- 199
MQ S +P+ + Y I++ + K K+ +E+F L+DE P
Sbjct: 333 MQRSTVKPNLVIYTILIDSLCKCGKIKDGKELFSRLIDEGLKPNVYTYTALVGALCKEGL 392
Query: 200 ---------------LKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNS 244
PD+ ++++I + + AR+L M RG T
Sbjct: 393 IIEAHKLFRKMEEDGCTPDKCAYNVIIQGFLQHKDPSMARQLVEEMVNRGFSADAATRAL 452
Query: 245 LMSFETN 251
L F TN
Sbjct: 453 LNDFPTN 459
Score = 47.0 bits (110), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 31/167 (18%), Positives = 69/167 (41%)
Query: 323 DQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTL 382
D A F+ M + P I ++ + S+ V E + ++ G ++ + L
Sbjct: 44 DDALASFRLMLLRKPLPCIVEFSKLFSSIVRMGHYETVVYLSKEIEFLGIEQDIHSLSIL 103
Query: 383 IKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGF 442
I + ++ ++ + + K+ G++P+ FTT+++ D ++ Y +M G
Sbjct: 104 INCFCHLHRVDFGLSVLSKILKLGLEPSIVTFTTLLNGLCMEGKMDQVMMLYDDMLVRGL 163
Query: 443 PPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGINGLSISVD 489
P+ N++++ + + NEA L P + S +D
Sbjct: 164 QPNVYTYNVIINSLSKSGKANEALGFLKQMEKVGCVPNVVNYSTLID 210
>gi|224069250|ref|XP_002302937.1| predicted protein [Populus trichocarpa]
gi|222844663|gb|EEE82210.1| predicted protein [Populus trichocarpa]
Length = 564
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 105/415 (25%), Positives = 208/415 (50%), Gaps = 21/415 (5%)
Query: 63 VLGTLVRLKQLKK-WNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSF 121
+LG+LVR +K W +E+ E ++ F+ F ++I + G+ +K+ ++L
Sbjct: 134 LLGSLVRSNCFEKAWLFFNELKERVK------FDVYSFGIMIKGCCENGNLDKSFQLLGL 187
Query: 122 MNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANK 181
+ G +P+VV +T L++ + G + A F +M G + T+ +++ +
Sbjct: 188 LQDMGLSPNVVIYTTLIDGCCKNGDIERARLFFDKMGEMGLVANQYTFTVLINGLFKKGL 247
Query: 182 FKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVT 241
K+ ++F + + + L P+ ++ ++ Y G +A LF M ERGV+ + VT
Sbjct: 248 KKDGFDLFEKM---KINGLFPNLYTYNCLMNEYCGEGKICRAFDLFDEMRERGVEANVVT 304
Query: 242 YNSL---MSFETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEML 298
YN+L M E E K+ DQM++A + P++++Y LI + ++A ++ +++
Sbjct: 305 YNTLIGGMCREERVWEAEKLVDQMKKAAVSPNLITYNTLIGGFCDVGNLDKASSLLDQLK 364
Query: 299 DAGVRPTHKAYNILLDAFAISG----MVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNA 354
G+ P+ YNIL++ ++ +G + D AR M SP + T ++ AYV
Sbjct: 365 SNGLSPSLVTYNILIEGYSKAGNWKGVADLARE----MEGRGISPSKVTCTVLIDAYVRL 420
Query: 355 SDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIF 414
+ME A + + +++ G VP+V YG LI G N+++ +++ M ++P+ I+
Sbjct: 421 QEMEKAFQIYSSMEKFGLVPDVYVYGVLIHGLCMKGNMKESSKLFRSMGEMHVEPSDVIY 480
Query: 415 TTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELL 469
T++ Y K + A+ +EME+ G P+ + + ++ + + EA LL
Sbjct: 481 NTMIHGYCKEDNSYRALRLLREMEAKGLVPNVASYSSIIGVLCKDGKWEEAEVLL 535
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 91/383 (23%), Positives = 182/383 (47%), Gaps = 11/383 (2%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKG--YAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQS 159
+I A+ K +KA + M KG + P++ + +L+ + R ++ A F ++
Sbjct: 99 IINAHLKSQLLDKALIFFNEMVDKGLVFRPNIFN--SLLGSLVRSNCFEKAWLFFNELKE 156
Query: 160 SGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGG 219
+ ++ I++K E ++ ++ L D L P+ ++ +I K G
Sbjct: 157 R-VKFDVYSFGIMIKGCCENGNLDKSFQLLGLLQD---MGLSPNVVIYTTLIDGCCKNGD 212
Query: 220 YEKARKLFALMAERGVQQSTVTYNSLMS--FETNYKEVS-KIYDQMQRAGLQPDVVSYAL 276
E+AR F M E G+ + T+ L++ F+ K+ ++++M+ GL P++ +Y
Sbjct: 213 IERARLFFDKMGEMGLVANQYTFTVLINGLFKKGLKKDGFDLFEKMKINGLFPNLYTYNC 272
Query: 277 LINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDR 336
L+N Y + A +F+EM + GV YN L+ V +A + M++
Sbjct: 273 LMNEYCGEGKICRAFDLFDEMRERGVEANVVTYNTLIGGMCREERVWEAEKLVDQMKKAA 332
Query: 337 CSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMM 396
SP++ +Y T++ + + +++ A +LK +G P+++TY LI+GY+K N + +
Sbjct: 333 VSPNLITYNTLIGGFCDVGNLDKASSLLDQLKSNGLSPSLVTYNILIEGYSKAGNWKGVA 392
Query: 397 EIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLA 456
++ +M GI P++ T ++DAY + ++ + A Y ME G PD +L+
Sbjct: 393 DLAREMEGRGISPSKVTCTVLIDAYVRLQEMEKAFQIYSSMEKFGLVPDVYVYGVLIHGL 452
Query: 457 KTADERNEANELLGNFNHPNNEP 479
E+++L + + EP
Sbjct: 453 CMKGNMKESSKLFRSMGEMHVEP 475
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 55/299 (18%), Positives = 127/299 (42%), Gaps = 2/299 (0%)
Query: 193 LDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMS--FET 250
L + ++P ++ +I + K+ +KA F M ++G+ +NSL+ +
Sbjct: 82 LTQNQNPSMTTALLYESIINAHLKSQLLDKALIFFNEMVDKGLVFRPNIFNSLLGSLVRS 141
Query: 251 NYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYN 310
N E + ++ + ++ DV S+ ++I + +++ + + D G+ P Y
Sbjct: 142 NCFEKAWLFFNELKERVKFDVYSFGIMIKGCCENGNLDKSFQLLGLLQDMGLSPNVVIYT 201
Query: 311 ILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQD 370
L+D +G +++AR F M + ++T +++ + F ++K +
Sbjct: 202 TLIDGCCKNGDIERARLFFDKMGEMGLVANQYTFTVLINGLFKKGLKKDGFDLFEKMKIN 261
Query: 371 GFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSA 430
G PN+ TY L+ Y + + +++D+MR G++ N + T++ + + A
Sbjct: 262 GLFPNLYTYNCLMNEYCGEGKICRAFDLFDEMRERGVEANVVTYNTLIGGMCREERVWEA 321
Query: 431 VVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGINGLSISVD 489
+M+ P+ N L+ ++A+ LL P + +I ++
Sbjct: 322 EKLVDQMKKAAVSPNLITYNTLIGGFCDVGNLDKASSLLDQLKSNGLSPSLVTYNILIE 380
>gi|225427482|ref|XP_002263209.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 592
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 101/427 (23%), Positives = 190/427 (44%), Gaps = 29/427 (6%)
Query: 71 KQLKKWNVVSEVLEW-LRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAP 129
KQ+ + S+V + I S+ N +DF VL+ + K G+ P
Sbjct: 98 KQMDSLGIPSDVYTLAIVINSFCHLNRVDF---------------GFSVLAKIFKLGHQP 142
Query: 130 SVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVF 189
+ T L+ G+ A +F +M G +P+ +TY ++ + + A +
Sbjct: 143 DTATFTTLIRGLCVEGKIGEALHLFDKMVGEGFQPNGVTYGTLIHGLCKVGNSRAAIRLL 202
Query: 190 MTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSL---M 246
+++ + +P+ ++ +I K +A +F+ M +G+ + TYNS+ +
Sbjct: 203 RSMVQKN---CEPNVITYNTIIDCLFKDRQVNEALNIFSEMIAKGISPNVSTYNSIIHGL 259
Query: 247 SFETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTH 306
+ +K V+ + ++M + + P+VV + L++A K A V + M+ GV P
Sbjct: 260 CKFSEWKHVATLMNEMVDSKIMPNVVIFTTLVDALCKEGMVTIAHDVVDVMIQRGVEPDV 319
Query: 307 KAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRR 366
Y L+D + +D+A VF M R C+P++ SY+T+++ Y ++ A F
Sbjct: 320 VTYTALMDGHCLRSEMDEADKVFDTMVRKGCAPNVISYSTLINGYCKIQRIDKAMYLFEE 379
Query: 367 LKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKD 426
+ Q VPN++TY TLI G V L + ++ +M +G P+ + ++D K +
Sbjct: 380 MCQRELVPNIVTYNTLIHGLCHVGRLRDAIALFHEMVASGQIPDLVTYRILLDYLCKTRH 439
Query: 427 FDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPG------ 480
D A+ K +E PD ++ NI++ E A +L + + P
Sbjct: 440 LDQAMAMLKAIEGSNLAPDIQSYNIVIDGMCRVGELEAAGDLFSSLSSKGLHPDVWTYTI 499
Query: 481 -INGLSI 486
INGL +
Sbjct: 500 MINGLCL 506
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 100/399 (25%), Positives = 175/399 (43%), Gaps = 41/399 (10%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + + LI K G+ A ++L M +K P+V+++ +++ + + A IF
Sbjct: 178 NGVTYGTLIHGLCKVGNSRAAIRLLRSMVQKNCEPNVITYNTIIDCLFKDRQVNEALNIF 237
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
M + G P+ TY I+ + +++K + ++D S + P+ +F ++
Sbjct: 238 SEMIAKGISPNVSTYNSIIHGLCKFSEWKHVATLMNEMVD---SKIMPNVVIFTTLVDAL 294
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSLM---SFETNYKEVSKIYDQMQRAGLQPDV 271
K G A + +M +RGV+ VTY +LM + E K++D M R G P+V
Sbjct: 295 CKEGMVTIAHDVVDVMIQRGVEPDVVTYTALMDGHCLRSEMDEADKVFDTMVRKGCAPNV 354
Query: 272 VSYALLINAYGKARR--------EE---------------------------EALAVFEE 296
+SY+ LIN Y K +R EE +A+A+F E
Sbjct: 355 ISYSTLINGYCKIQRIDKAMYLFEEMCQRELVPNIVTYNTLIHGLCHVGRLRDAIALFHE 414
Query: 297 MLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASD 356
M+ +G P Y ILLD + +DQA + K + +PDI SY ++ +
Sbjct: 415 MVASGQIPDLVTYRILLDYLCKTRHLDQAMAMLKAIEGSNLAPDIQSYNIVIDGMCRVGE 474
Query: 357 MEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTT 416
+E A F L G P+V TY +I G L + +++ +M +G P+ +
Sbjct: 475 LEAAGDLFSSLSSKGLHPDVWTYTIMINGLCLQGLLAEATKLFREMNTDGCSPDDCTYNL 534
Query: 417 IMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSL 455
I + +N + SA+ +EM GF D +++ +
Sbjct: 535 ITRGFLRNNETLSAIQLLQEMLGRGFSADASTITLIVEM 573
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 45/195 (23%), Positives = 85/195 (43%)
Query: 251 NYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYN 310
+Y V + QM G+ DV + A++IN++ R + +V ++ G +P +
Sbjct: 89 HYSTVLSLSKQMDSLGIPSDVYTLAIVINSFCHLNRVDFGFSVLAKIFKLGHQPDTATFT 148
Query: 311 ILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQD 370
L+ + G + +A +F M + P+ +Y T++ + A + R + Q
Sbjct: 149 TLIRGLCVEGKIGEALHLFDKMVGEGFQPNGVTYGTLIHGLCKVGNSRAAIRLLRSMVQK 208
Query: 371 GFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSA 430
PNVITY T+I K + + + I+ +M GI PN + + +I+ K ++
Sbjct: 209 NCEPNVITYNTIIDCLFKDRQVNEALNIFSEMIAKGISPNVSTYNSIIHGLCKFSEWKHV 268
Query: 431 VVWYKEMESCGFPPD 445
EM P+
Sbjct: 269 ATLMNEMVDSKIMPN 283
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 103/222 (46%), Gaps = 4/222 (1%)
Query: 259 YDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAI 318
+++M P VV +A ++ + + L++ ++M G+ I++++F
Sbjct: 62 FNRMLHMQPPPSVVDFAKILTSIANMKHYSTVLSLSKQMDSLGIPSDVYTLAIVINSFCH 121
Query: 319 SGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVIT 378
VD +V + + PD ++TT++ + A F ++ +GF PN +T
Sbjct: 122 LNRVDFGFSVLAKIFKLGHQPDTATFTTLIRGLCVEGKIGEALHLFDKMVGEGFQPNGVT 181
Query: 379 YGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEME 438
YGTLI G KV N + + M +PN + TI+D K++ + A+ + EM
Sbjct: 182 YGTLIHGLCKVGNSRAAIRLLRSMVQKNCEPNVITYNTIIDCLFKDRQVNEALNIFSEMI 241
Query: 439 SCGFPPDQKAKN-ILLSLAKTADERNEA---NELLGNFNHPN 476
+ G P+ N I+ L K ++ ++ A NE++ + PN
Sbjct: 242 AKGISPNVSTYNSIIHGLCKFSEWKHVATLMNEMVDSKIMPN 283
Score = 44.3 bits (103), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 37/193 (19%), Positives = 82/193 (42%), Gaps = 4/193 (2%)
Query: 288 EEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTM 347
+EAL+ F ML P+ + +L + A ++ K M D+ + +
Sbjct: 56 DEALSSFNRMLHMQPPPSVVDFAKILTSIANMKHYSTVLSLSKQMDSLGIPSDVYTLAIV 115
Query: 348 LSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGI 407
++++ + + ++ ++ + G P+ T+ TLI+G + + + ++DKM G
Sbjct: 116 INSFCHLNRVDFGFSVLAKIFKLGHQPDTATFTTLIRGLCVEGKIGEALHLFDKMVGEGF 175
Query: 408 KPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEA-- 465
+PN + T++ K + +A+ + M P+ N ++ + NEA
Sbjct: 176 QPNGVTYGTLIHGLCKVGNSRAAIRLLRSMVQKNCEPNVITYNTIIDCLFKDRQVNEALN 235
Query: 466 --NELLGNFNHPN 476
+E++ PN
Sbjct: 236 IFSEMIAKGISPN 248
Score = 43.5 bits (101), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 33/161 (20%), Positives = 65/161 (40%), Gaps = 2/161 (1%)
Query: 322 VDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGT 381
+D+A + F M + P + + +L++ N +++ G +V T
Sbjct: 55 IDEALSSFNRMLHMQPPPSVVDFAKILTSIANMKHYSTVLSLSKQMDSLGIPSDVYTLAI 114
Query: 382 LIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCG 441
+I + +N ++ + K+ G +P+ FTT++ A+ + +M G
Sbjct: 115 VINSFCHLNRVDFGFSVLAKIFKLGHQPDTATFTTLIRGLCVEGKIGEALHLFDKMVGEG 174
Query: 442 FPPDQKAKNILL-SLAKTADERNEANELLGNFNHPNNEPGI 481
F P+ L+ L K + R A LL + N EP +
Sbjct: 175 FQPNGVTYGTLIHGLCKVGNSR-AAIRLLRSMVQKNCEPNV 214
>gi|226509112|ref|NP_001141010.1| uncharacterized protein LOC100273089 [Zea mays]
gi|194702156|gb|ACF85162.1| unknown [Zea mays]
gi|413937351|gb|AFW71902.1| hypothetical protein ZEAMMB73_497690 [Zea mays]
Length = 567
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 99/374 (26%), Positives = 175/374 (46%), Gaps = 6/374 (1%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
LI +G + A VL M ++G P VV++T L+EA + YK A + M G
Sbjct: 172 LIRGLCGRGRTSNALAVLEDMFRRGCLPDVVTYTILLEATCKRSGYKQAMKLLDEMHDKG 231
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
P +TY ++L + + ++A E L +P+ +++++ A +E
Sbjct: 232 CAPDIVTYNVVLNGICQEGRVEDAMEFLKNL---PSYGCEPNTVSYNIVLKGLFTAERWE 288
Query: 222 KARKLFALMAERGVQQSTVTYNSLMSFETNYKEVS---KIYDQMQRAGLQPDVVSYALLI 278
A KL MA +G + VT+N L+SF V ++ +QM + G P+ +SY L+
Sbjct: 289 DAEKLMEEMAHKGCPPNVVTFNMLISFLCRRGLVEPAMEVLEQMPQYGCTPNSLSYNPLL 348
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCS 338
+A+ K ++ +A+ E M+ G P +YN LL A +G VD A + ++ CS
Sbjct: 349 HAFCKQKKIHKAMEFVELMVSRGCYPDIVSYNTLLTALCRNGEVDVAIELLHQLKDKGCS 408
Query: 339 PDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEI 398
P + SY T++ A + A + + G P++ITY T+ G + + +E+ +
Sbjct: 409 PVLISYNTVIDGLTKAGKTKEALELLDEMTSKGLQPDIITYSTIASGLCREDRIEEAVRT 468
Query: 399 YDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKT 458
+ K++ GI+P ++ I+ K ++ +A+ + M S G P++ IL+
Sbjct: 469 FCKVQDMGIRPTAALYNAILLGLCKRRETHNAIDLFAYMISSGCMPNESTYTILVEGLAY 528
Query: 459 ADERNEANELLGNF 472
EA EL
Sbjct: 529 EGLVKEARELFAQL 542
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 113/465 (24%), Positives = 205/465 (44%), Gaps = 16/465 (3%)
Query: 4 LAPRKFMQKRRKVEVFKDAADEAGKKNWRRLMNQIEEVGSAVAVLRSERTRGQPLPKDLV 63
L PR + A A R++ + E+ A+ ++ S P P
Sbjct: 46 LVPRVAAYPAASAATPRRKASSASATERLRVLVRRGELDDALRLVDSLAGLNPPSPA--A 103
Query: 64 LGTLVRLKQLKKWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMN 123
+G L +KK + R+ + + M + ++ Y G + A ++++ M
Sbjct: 104 VGPCAAL--IKKLCASGRTADARRVLAASGPDVMVYNAMVAGYCGAGQLDAARRLVADMP 161
Query: 124 KKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFK 183
+ P ++ L+ GR NA A+ M G P +TY I+L+ + + +K
Sbjct: 162 VE---PDAYTYNTLIRGLCGRGRTSNALAVLEDMFRRGCLPDVVTYTILLEATCKRSGYK 218
Query: 184 EAEEVFMTLLDE-EKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTY 242
+A M LLDE PD +++++ + G E A + + G + +TV+Y
Sbjct: 219 QA----MKLLDEMHDKGCAPDIVTYNVVLNGICQEGRVEDAMEFLKNLPSYGCEPNTVSY 274
Query: 243 NSLMS---FETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLD 299
N ++ +++ K+ ++M G P+VV++ +LI+ + E A+ V E+M
Sbjct: 275 NIVLKGLFTAERWEDAEKLMEEMAHKGCPPNVVTFNMLISFLCRRGLVEPAMEVLEQMPQ 334
Query: 300 AGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEG 359
G P +YN LL AF + +A + M C PDI SY T+L+A +++
Sbjct: 335 YGCTPNSLSYNPLLHAFCKQKKIHKAMEFVELMVSRGCYPDIVSYNTLLTALCRNGEVDV 394
Query: 360 AEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMD 419
A + +LK G P +I+Y T+I G K ++ +E+ D+M G++P+ ++TI
Sbjct: 395 AIELLHQLKDKGCSPVLISYNTVIDGLTKAGKTKEALELLDEMTSKGLQPDIITYSTIAS 454
Query: 420 AYGKNKDFDSAVVWYKEMESCGFPPDQKAKN-ILLSLAKTADERN 463
+ + AV + +++ G P N ILL L K + N
Sbjct: 455 GLCREDRIEEAVRTFCKVQDMGIRPTAALYNAILLGLCKRRETHN 499
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 84/291 (28%), Positives = 131/291 (45%), Gaps = 6/291 (2%)
Query: 202 PDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSK---I 258
PD +++ M+ Y AG + AR+L A M V+ TYN+L+ S +
Sbjct: 132 PDVMVYNAMVAGYCGAGQLDAARRLVADMP---VEPDAYTYNTLIRGLCGRGRTSNALAV 188
Query: 259 YDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAI 318
+ M R G PDVV+Y +L+ A K ++A+ + +EM D G P YN++L+
Sbjct: 189 LEDMFRRGCLPDVVTYTILLEATCKRSGYKQAMKLLDEMHDKGCAPDIVTYNVVLNGICQ 248
Query: 319 SGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVIT 378
G V+ A K + C P+ SY +L A E AEK + G PNV+T
Sbjct: 249 EGRVEDAMEFLKNLPSYGCEPNTVSYNIVLKGLFTAERWEDAEKLMEEMAHKGCPPNVVT 308
Query: 379 YGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEME 438
+ LI + +E ME+ ++M G PN + ++ A+ K K A+ + + M
Sbjct: 309 FNMLISFLCRRGLVEPAMEVLEQMPQYGCTPNSLSYNPLLHAFCKQKKIHKAMEFVELMV 368
Query: 439 SCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGINGLSISVD 489
S G PD + N LL+ E + A ELL P + + +D
Sbjct: 369 SRGCYPDIVSYNTLLTALCRNGEVDVAIELLHQLKDKGCSPVLISYNTVID 419
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 86/379 (22%), Positives = 165/379 (43%), Gaps = 16/379 (4%)
Query: 108 KQGDFNKAEKVL-SFMNKKGYAPSVVSHTA-LMEAYGRGGRYKNAEAIFRRMQSSGPRPS 165
++G+ + A +++ S +P+ V A L++ GR +A R + +SGP
Sbjct: 79 RRGELDDALRLVDSLAGLNPPSPAAVGPCAALIKKLCASGRTADAR---RVLAASGP--D 133
Query: 166 ALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARK 225
+ Y ++ + A + A + + P++PD ++ +I G A
Sbjct: 134 VMVYNAMVAGYCGAGQLDAARRLVADM------PVEPDAYTYNTLIRGLCGRGRTSNALA 187
Query: 226 LFALMAERGVQQSTVTYNSLMSF---ETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYG 282
+ M RG VTY L+ + YK+ K+ D+M G PD+V+Y +++N
Sbjct: 188 VLEDMFRRGCLPDVVTYTILLEATCKRSGYKQAMKLLDEMHDKGCAPDIVTYNVVLNGIC 247
Query: 283 KARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDIC 342
+ R E+A+ + + G P +YNI+L + + A + + M C P++
Sbjct: 248 QEGRVEDAMEFLKNLPSYGCEPNTVSYNIVLKGLFTAERWEDAEKLMEEMAHKGCPPNVV 307
Query: 343 SYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKM 402
++ ++S +E A + ++ Q G PN ++Y L+ + K + K ME + M
Sbjct: 308 TFNMLISFLCRRGLVEPAMEVLEQMPQYGCTPNSLSYNPLLHAFCKQKKIHKAMEFVELM 367
Query: 403 RVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADER 462
G P+ + T++ A +N + D A+ +++ G P + N ++ A +
Sbjct: 368 VSRGCYPDIVSYNTLLTALCRNGEVDVAIELLHQLKDKGCSPVLISYNTVIDGLTKAGKT 427
Query: 463 NEANELLGNFNHPNNEPGI 481
EA ELL +P I
Sbjct: 428 KEALELLDEMTSKGLQPDI 446
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 79/349 (22%), Positives = 157/349 (44%), Gaps = 41/349 (11%)
Query: 97 MDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRR 156
+ + +L+ A K+ + +A K+L M+ KG AP +V++ ++ + GR ++A +
Sbjct: 202 VTYTILLEATCKRSGYKQAMKLLDEMHDKGCAPDIVTYNVVLNGICQEGRVEDAMEFLKN 261
Query: 157 MQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKK 216
+ S G P+ ++Y I+LK A ++++AE+ M + + P P+ F+M+I +
Sbjct: 262 LPSYGCEPNTVSYNIVLKGLFTAERWEDAEK-LMEEMAHKGCP--PNVVTFNMLISFLCR 318
Query: 217 AGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSK---IYDQMQRAGLQPDVVS 273
G E A ++ M + G ++++YN L+ K++ K + M G PD+VS
Sbjct: 319 RGLVEPAMEVLEQMPQYGCTPNSLSYNPLLHAFCKQKKIHKAMEFVELMVSRGCYPDIVS 378
Query: 274 YALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMR 333
Y L+ A + + A+ + ++ D G P +YN ++D +G +A + M
Sbjct: 379 YNTLLTALCRNGEVDVAIELLHQLKDKGCSPVLISYNTVIDGLTKAGKTKEALELLDEMT 438
Query: 334 RDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLK------------------------- 368
PDI +Y+T+ S +E A + F +++
Sbjct: 439 SKGLQPDIITYSTIASGLCREDRIEEAVRTFCKVQDMGIRPTAALYNAILLGLCKRRETH 498
Query: 369 ----------QDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGI 407
G +PN TY L++G A +++ E++ ++ G+
Sbjct: 499 NAIDLFAYMISSGCMPNESTYTILVEGLAYEGLVKEARELFAQLCSRGV 547
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 74/300 (24%), Positives = 142/300 (47%), Gaps = 8/300 (2%)
Query: 79 VSEVLEWLR-IQSW-WDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTA 136
V + +E+L+ + S+ + N + + +++ + AEK++ M KG P+VV+
Sbjct: 252 VEDAMEFLKNLPSYGCEPNTVSYNIVLKGLFTAERWEDAEKLMEEMAHKGCPPNVVTFNM 311
Query: 137 LMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEE 196
L+ R G + A + +M G P++L+Y +L F + K +A E F+ L+
Sbjct: 312 LISFLCRRGLVEPAMEVLEQMPQYGCTPNSLSYNPLLHAFCKQKKIHKAME-FVELMVSR 370
Query: 197 KSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETN---YK 253
PD ++ ++ + G + A +L + ++G ++YN+++ T K
Sbjct: 371 GC--YPDIVSYNTLLTALCRNGEVDVAIELLHQLKDKGCSPVLISYNTVIDGLTKAGKTK 428
Query: 254 EVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILL 313
E ++ D+M GLQPD+++Y+ + + + R EEA+ F ++ D G+RPT YN +L
Sbjct: 429 EALELLDEMTSKGLQPDIITYSTIASGLCREDRIEEAVRTFCKVQDMGIRPTAALYNAIL 488
Query: 314 DAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFV 373
A +F M C P+ +YT ++ ++ A + F +L G V
Sbjct: 489 LGLCKRRETHNAIDLFAYMISSGCMPNESTYTILVEGLAYEGLVKEARELFAQLCSRGVV 548
>gi|224068454|ref|XP_002326124.1| predicted protein [Populus trichocarpa]
gi|222833317|gb|EEE71794.1| predicted protein [Populus trichocarpa]
Length = 512
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 103/417 (24%), Positives = 197/417 (47%), Gaps = 10/417 (2%)
Query: 44 AVAVLRSERTRGQPLPKDLVLGTLVRLKQLKKWN---VVSEVLEWLRIQSWWDFNEMDFL 100
A+A + G D L L+ + +K++N V + LE+ R+ + +
Sbjct: 18 AIARFHGQTQGGSRFYPDRQLTPLIAFEVIKRFNNPKVGFKFLEFSRLNLNVNHCYSTYN 77
Query: 101 MLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSS 160
+L+ + + G + V +M G+ P L+ + + + + +Q
Sbjct: 78 LLMRSLCQMGHHDLVNIVFDYMGSDGHLPDSKLLGFLVTWMAQASDFDMVKKLLAEVQGK 137
Query: 161 GPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGY 220
R ++ Y +L + V+ N+ EA +F L + SP PD F+++I + GG
Sbjct: 138 EVRINSFVYNNLLSVLVKQNQVHEAIYLFKEYLVMQ-SP--PDTWTFNILIRGLCRVGGV 194
Query: 221 EKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSK---IYDQMQ-RAGLQPDVVSYAL 276
++A ++F M G VTYN+L++ EV + ++ ++Q R+ PD+V+Y
Sbjct: 195 DRAFEVFKDMESFGCLPDVVTYNTLINGLCKANEVQRGCELFKEIQSRSDCSPDIVTYTS 254
Query: 277 LINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDR 336
+I+ + K+ + +EA +FEEM+ +G++P +N+L+D F G + +A +++ M
Sbjct: 255 IISGFCKSGKMKEASNLFEEMMRSGIQPNVITFNVLIDGFGKIGNIAEAEAMYRKMAYFD 314
Query: 337 CSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMM 396
CS D+ ++T+++ Y A + KF+ +K P V TY LI K N L +
Sbjct: 315 CSADVVTFTSLIDGYCRAGQVNHGLKFWNVMKTRNVSPTVYTYAVLINALCKENRLNEAR 374
Query: 397 EIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILL 453
+ +++ + I P ++ ++D + K + D V KEME PD+ IL+
Sbjct: 375 DFLGQIKNSSIIPKPFMYNPVIDGFCKAGNVDEGNVILKEMEEKRCDPDKVTFTILI 431
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 91/330 (27%), Positives = 153/330 (46%), Gaps = 19/330 (5%)
Query: 70 LKQLKKWNVVSEVL----EWLRIQS---WWDFNEMDFLMLITAYGKQGDFNKAEKVLSFM 122
L L K N V E + E+L +QS W FN +LI + G ++A +V M
Sbjct: 150 LSVLVKQNQVHEAIYLFKEYLVMQSPPDTWTFN-----ILIRGLCRVGGVDRAFEVFKDM 204
Query: 123 NKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQS-SGPRPSALTYQIILKLFVEANK 181
G P VV++ L+ + + +F+ +QS S P +TY I+ F ++ K
Sbjct: 205 ESFGCLPDVVTYNTLINGLCKANEVQRGCELFKEIQSRSDCSPDIVTYTSIISGFCKSGK 264
Query: 182 FKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVT 241
KEA +F ++ +S ++P+ F+++I + K G +A ++ MA VT
Sbjct: 265 MKEASNLFEEMM---RSGIQPNVITFNVLIDGFGKIGNIAEAEAMYRKMAYFDCSADVVT 321
Query: 242 YNSLMSFETNYKEVS---KIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEML 298
+ SL+ +V+ K ++ M+ + P V +YA+LINA K R EA ++
Sbjct: 322 FTSLIDGYCRAGQVNHGLKFWNVMKTRNVSPTVYTYAVLINALCKENRLNEARDFLGQIK 381
Query: 299 DAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDME 358
++ + P YN ++D F +G VD+ + K M RC PD ++T ++ + M
Sbjct: 382 NSSIIPKPFMYNPVIDGFCKAGNVDEGNVILKEMEEKRCDPDKVTFTILIIGHCVKGRMF 441
Query: 359 GAEKFFRRLKQDGFVPNVITYGTLIKGYAK 388
A F R+ P+ IT +LI K
Sbjct: 442 EAINIFNRMLATRCAPDNITVNSLISCLLK 471
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 71/282 (25%), Positives = 136/282 (48%), Gaps = 4/282 (1%)
Query: 202 PDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSK-IYD 260
PD K+ ++ +A ++ +KL A + + V+ ++ YN+L+S +V + IY
Sbjct: 106 PDSKLLGFLVTWMAQASDFDMVKKLLAEVQGKEVRINSFVYNNLLSVLVKQNQVHEAIYL 165
Query: 261 QMQRAGLQ--PDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAI 318
+ +Q PD ++ +LI + + A VF++M G P YN L++
Sbjct: 166 FKEYLVMQSPPDTWTFNILIRGLCRVGGVDRAFEVFKDMESFGCLPDVVTYNTLINGLCK 225
Query: 319 SGMVDQARTVFKCMR-RDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVI 377
+ V + +FK ++ R CSPDI +YT+++S + + M+ A F + + G PNVI
Sbjct: 226 ANEVQRGCELFKEIQSRSDCSPDIVTYTSIISGFCKSGKMKEASNLFEEMMRSGIQPNVI 285
Query: 378 TYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEM 437
T+ LI G+ K+ N+ + +Y KM + FT+++D Y + + + ++ M
Sbjct: 286 TFNVLIDGFGKIGNIAEAEAMYRKMAYFDCSADVVTFTSLIDGYCRAGQVNHGLKFWNVM 345
Query: 438 ESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEP 479
++ P +L++ + NEA + LG + + P
Sbjct: 346 KTRNVSPTVYTYAVLINALCKENRLNEARDFLGQIKNSSIIP 387
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/285 (22%), Positives = 117/285 (41%), Gaps = 11/285 (3%)
Query: 58 LPKDLVLGTLVRLKQLKKWNVVSEVLEWLR-IQSWWDFNE--MDFLMLITAYGKQGDFNK 114
LP + TL+ L K N V E + IQS D + + + +I+ + K G +
Sbjct: 210 LPDVVTYNTLI--NGLCKANEVQRGCELFKEIQSRSDCSPDIVTYTSIISGFCKSGKMKE 267
Query: 115 AEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILK 174
A + M + G P+V++ L++ +G+ G AEA++R+M +T+ ++
Sbjct: 268 ASNLFEEMMRSGIQPNVITFNVLIDGFGKIGNIAEAEAMYRKMAYFDCSADVVTFTSLID 327
Query: 175 LFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERG 234
+ A + + + + SP + ++I K +AR +
Sbjct: 328 GYCRAGQVNHGLKFWNVMKTRNVSP---TVYTYAVLINALCKENRLNEARDFLGQIKNSS 384
Query: 235 VQQSTVTYNSLM---SFETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEAL 291
+ YN ++ N E + I +M+ PD V++ +LI + R EA+
Sbjct: 385 IIPKPFMYNPVIDGFCKAGNVDEGNVILKEMEEKRCDPDKVTFTILIIGHCVKGRMFEAI 444
Query: 292 AVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDR 336
+F ML P + N L+ +GM ++A + K DR
Sbjct: 445 NIFNRMLATRCAPDNITVNSLISCLLKAGMPNEAYRIRKMALEDR 489
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 40/172 (23%), Positives = 68/172 (39%)
Query: 298 LDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDM 357
L+ V + YN+L+ + G D VF M D PD +++ ASD
Sbjct: 65 LNLNVNHCYSTYNLLMRSLCQMGHHDLVNIVFDYMGSDGHLPDSKLLGFLVTWMAQASDF 124
Query: 358 EGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTI 417
+ +K ++ N Y L+ K N + + + ++ + V P+ F +
Sbjct: 125 DMVKKLLAEVQGKEVRINSFVYNNLLSVLVKQNQVHEAIYLFKEYLVMQSPPDTWTFNIL 184
Query: 418 MDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELL 469
+ + D A +K+MES G PD N L++ A+E EL
Sbjct: 185 IRGLCRVGGVDRAFEVFKDMESFGCLPDVVTYNTLINGLCKANEVQRGCELF 236
>gi|147787958|emb|CAN73849.1| hypothetical protein VITISV_021776 [Vitis vinifera]
Length = 671
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 112/462 (24%), Positives = 201/462 (43%), Gaps = 33/462 (7%)
Query: 54 RGQPLPKDL----VLGTLVRLKQLKKWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQ 109
R QP P + +L ++ ++K +S ++ I N +LI ++
Sbjct: 54 RMQPPPSTVDFNKLLTSIAKMKHHSTLLSLSHQMDSFGIPP----NIYTLHILINSFCHL 109
Query: 110 GDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTY 169
A VL+ + K G+ P + T L+ G+ A +F +M G RP +TY
Sbjct: 110 NRVGFAFSVLAKILKLGHQPDTATFTTLIRGICVEGKIGEALHLFDKMIGEGFRPDVVTY 169
Query: 170 QIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFAL 229
++ + A + +++ + +P+ ++ +I K +A LF+
Sbjct: 170 GTLINGLCKVGNTSAAIRLLGSMVQKN---CQPNVFAYNTIIDSLCKDRQVTEAFNLFSE 226
Query: 230 MAERGVQQSTVTYNSLMSFETN---YKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARR 286
M +G+ TYNSL+ N +K V+ + ++M + + PDVVS+ +++A K +
Sbjct: 227 MVTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSKIMPDVVSFNTVVDALCKEGK 286
Query: 287 EEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTT 346
EA V ++M+ GV P Y L+D + +D+A VF M C P++ SY T
Sbjct: 287 VTEAHDVVDKMIQRGVEPNVVTYTALMDGHCLLSEMDEAVKVFDTMVCKGCMPNVISYNT 346
Query: 347 MLSAYVNAS-------------------DMEGAEKFFRRLKQDGFVPNVITYGTLIKGYA 387
+++ Y +M+ A K F + G +PNVI+Y TLI GY
Sbjct: 347 LINGYCKIQRIDKAIHYTXLMDXXCCYLNMDEAVKVFDTMVCKGCMPNVISYNTLINGYC 406
Query: 388 KVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQK 447
K+ ++K M ++ +M + P+ ++T++ + A+ + EM +C P+
Sbjct: 407 KIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQDAIALFHEMVACSQIPNLV 466
Query: 448 AKNILLSLAKTADERNEANELLGNFNHPNNEPGINGLSISVD 489
ILL EA LL N +P I +I++D
Sbjct: 467 TYRILLDYLCKNRYLAEAMALLKAIEGSNLDPDIQVNNIAID 508
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 97/391 (24%), Positives = 173/391 (44%), Gaps = 22/391 (5%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
LI K G+ + A ++L M +K P+V ++ ++++ + + A +F M + G
Sbjct: 172 LINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAYNTIIDSLCKDRQVTEAFNLFSEMVTKG 231
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
P TY ++ ++K + ++D S + PD F+ ++ K G
Sbjct: 232 ISPDIFTYNSLIHALCNLCEWKHVATLLNEMVD---SKIMPDVVSFNTVVDALCKEGKVT 288
Query: 222 KARKLFALMAERGVQQSTVTYNSLM---SFETNYKEVSKIYDQMQRAGLQPDVVSYALLI 278
+A + M +RGV+ + VTY +LM + E K++D M G P+V+SY LI
Sbjct: 289 EAHDVVDKMIQRGVEPNVVTYTALMDGHCLLSEMDEAVKVFDTMVCKGCMPNVISYNTLI 348
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCS 338
N Y K +R ++A+ Y L+D +D+A VF M C
Sbjct: 349 NGYCKIQRIDKAIH----------------YTXLMDXXCCYLNMDEAVKVFDTMVCKGCM 392
Query: 339 PDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEI 398
P++ SY T+++ Y ++ A F + + +P+ +TY TLI G V L+ + +
Sbjct: 393 PNVISYNTLINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQDAIAL 452
Query: 399 YDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKT 458
+ +M PN + ++D KN+ A+ K +E PD + NI +
Sbjct: 453 FHEMVACSQIPNLVTYRILLDYLCKNRYLAEAMALLKAIEGSNLDPDIQVNNIAIDGMCR 512
Query: 459 ADERNEANELLGNFNHPNNEPGINGLSISVD 489
A E A +L N + +P + SI ++
Sbjct: 513 AGELEAARDLFSNLSSKGLQPDVWTYSIMIN 543
Score = 138 bits (347), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 94/389 (24%), Positives = 174/389 (44%), Gaps = 23/389 (5%)
Query: 70 LKQLKKWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAP 129
L L +W V+ +L + + S + + F ++ A K+G +A V+ M ++G P
Sbjct: 246 LCNLCEWKHVATLLNEM-VDSKIMPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGVEP 304
Query: 130 SVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVF 189
+VV++TALM+ + A +F M G P+ ++Y ++ + + + +A +
Sbjct: 305 NVVTYTALMDGHCLLSEMDEAVKVFDTMVCKGCMPNVISYNTLINGYCKIQRIDKAIH-Y 363
Query: 190 MTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFE 249
L+D L D+ A K+F M +G + ++YN+L++
Sbjct: 364 TXLMDXXCCYLNMDE------------------AVKVFDTMVCKGCMPNVISYNTLINGY 405
Query: 250 TNYKEVSK---IYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTH 306
+ + K ++ +M R L PD V+Y+ LI+ R ++A+A+F EM+ P
Sbjct: 406 CKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQDAIALFHEMVACSQIPNL 465
Query: 307 KAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRR 366
Y ILLD + + +A + K + PDI + A ++E A F
Sbjct: 466 VTYRILLDYLCKNRYLAEAMALLKAIEGSNLDPDIQVNNIAIDGMCRAGELEAARDLFSN 525
Query: 367 LKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKD 426
L G P+V TY +I G + L++ +++ +M NG N I+ TI + +N +
Sbjct: 526 LSSKGLQPDVWTYSIMINGLCRRGLLDEASKLFREMDENGCTLNGCIYNTITRGFLRNNE 585
Query: 427 FDSAVVWYKEMESCGFPPDQKAKNILLSL 455
A+ +EM + GF D + + +
Sbjct: 586 TSRAIQLLQEMVARGFSADASTMTLFVKM 614
Score = 121 bits (304), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 86/352 (24%), Positives = 152/352 (43%), Gaps = 11/352 (3%)
Query: 106 YGKQGDFNKAEKVLSFMNKK---GYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGP 162
+ K FN + +S N+ PS V L+ + + + ++ +M S G
Sbjct: 33 HSKSLHFNTIDGAISSFNRMLRMQPPPSTVDFNKLLTSIAKMKHHSTLLSLSHQMDSFGI 92
Query: 163 RPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEK 222
P+ T I++ F N+ A V +L K +PD F +I G +
Sbjct: 93 PPNIYTLHILINSFCHLNRVGFAFSVLAKIL---KLGHQPDTATFTTLIRGICVEGKIGE 149
Query: 223 ARKLFALMAERGVQQSTVTYNSLMSFET---NYKEVSKIYDQMQRAGLQPDVVSYALLIN 279
A LF M G + VTY +L++ N ++ M + QP+V +Y +I+
Sbjct: 150 ALHLFDKMIGEGFRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAYNTIID 209
Query: 280 AYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSP 339
+ K R+ EA +F EM+ G+ P YN L+ A T+ M + P
Sbjct: 210 SLCKDRQVTEAFNLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSKIMP 269
Query: 340 DICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIY 399
D+ S+ T++ A + A ++ Q G PNV+TY L+ G+ ++ +++ ++++
Sbjct: 270 DVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGVEPNVVTYTALMDGHCLLSEMDEAVKVF 329
Query: 400 DKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEME--SCGFPPDQKAK 449
D M G PN + T+++ Y K + D A+ + M+ C D+ K
Sbjct: 330 DTMVCKGCMPNVISYNTLINGYCKIQRIDKAIHYTXLMDXXCCYLNMDEAVK 381
Score = 115 bits (287), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 74/308 (24%), Positives = 133/308 (43%), Gaps = 6/308 (1%)
Query: 150 AEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHM 209
A + F RM P PS + + KL K K + + + P+ H+
Sbjct: 45 AISSFNRMLRMQPPPSTVDFN---KLLTSIAKMKHHSTLLSLSHQMDSFGIPPNIYTLHI 101
Query: 210 MIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLM---SFETNYKEVSKIYDQMQRAG 266
+I + A + A + + G Q T T+ +L+ E E ++D+M G
Sbjct: 102 LINSFCHLNRVGFAFSVLAKILKLGHQPDTATFTTLIRGICVEGKIGEALHLFDKMIGEG 161
Query: 267 LQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQAR 326
+PDVV+Y LIN K A+ + M+ +P AYN ++D+ V +A
Sbjct: 162 FRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAYNTIIDSLCKDRQVTEAF 221
Query: 327 TVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGY 386
+F M SPDI +Y +++ A N + + + +P+V+++ T++
Sbjct: 222 NLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSKIMPDVVSFNTVVDAL 281
Query: 387 AKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQ 446
K + + ++ DKM G++PN +T +MD + + D AV + M G P+
Sbjct: 282 CKEGKVTEAHDVVDKMIQRGVEPNVVTYTALMDGHCLLSEMDEAVKVFDTMVCKGCMPNV 341
Query: 447 KAKNILLS 454
+ N L++
Sbjct: 342 ISYNTLIN 349
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 98/231 (42%)
Query: 259 YDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAI 318
+++M R P V + L+ + K + L++ +M G+ P +IL+++F
Sbjct: 49 FNRMLRMQPPPSTVDFNKLLTSIAKMKHHSTLLSLSHQMDSFGIPPNIYTLHILINSFCH 108
Query: 319 SGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVIT 378
V A +V + + PD ++TT++ + A F ++ +GF P+V+T
Sbjct: 109 LNRVGFAFSVLAKILKLGHQPDTATFTTLIRGICVEGKIGEALHLFDKMIGEGFRPDVVT 168
Query: 379 YGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEME 438
YGTLI G KV N + + M +PN + TI+D+ K++ A + EM
Sbjct: 169 YGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAYNTIIDSLCKDRQVTEAFNLFSEMV 228
Query: 439 SCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGINGLSISVD 489
+ G PD N L+ E LL P + + VD
Sbjct: 229 TKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSKIMPDVVSFNTVVD 279
Score = 46.2 bits (108), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 35/173 (20%), Positives = 65/173 (37%)
Query: 322 VDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGT 381
+D A + F M R + P + +L++ ++ G PN+ T
Sbjct: 42 IDGAISSFNRMLRMQPPPSTVDFNKLLTSIAKMKHHSTLLSLSHQMDSFGIPPNIYTLHI 101
Query: 382 LIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCG 441
LI + +N + + K+ G +P+ FTT++ A+ + +M G
Sbjct: 102 LINSFCHLNRVGFAFSVLAKILKLGHQPDTATFTTLIRGICVEGKIGEALHLFDKMIGEG 161
Query: 442 FPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGINGLSISVDEEDDD 494
F PD L++ + A LLG+ N +P + + +D D
Sbjct: 162 FRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAYNTIIDSLCKD 214
>gi|296086456|emb|CBI32045.3| unnamed protein product [Vitis vinifera]
Length = 648
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 91/357 (25%), Positives = 171/357 (47%), Gaps = 6/357 (1%)
Query: 99 FLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQ 158
+ LI + K G+ + A ++ M K+ +P +++TA++ + GR A+ +F M
Sbjct: 261 YTTLIDGFCKLGNVSSAYRLFDEMQKRKISPDFITYTAVICGLCQTGRVMEADKLFHEMV 320
Query: 159 SSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAG 218
P +TY ++ + + K KEA + +L + L P+ + + K G
Sbjct: 321 CKRLEPDEVTYTALIDGYCKEGKMKEAFSLHNQML---QMGLTPNIVTYTALADGLCKCG 377
Query: 219 GYEKARKLFALMAERGVQQSTVTYNSL---MSFETNYKEVSKIYDQMQRAGLQPDVVSYA 275
+ A +L M +G++ + TYNSL + N + K+ M+ AG PD V+Y
Sbjct: 378 EVDTANELLHEMCRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYT 437
Query: 276 LLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRD 335
L++AY K+R A + +MLD ++PT +N+L++ F +SGM++ + K M
Sbjct: 438 TLMDAYCKSREMVRAHELLRQMLDRELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEK 497
Query: 336 RCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKM 395
P+ +Y +++ Y ++M + +R + G VP+ TY LIKG+ K N+++
Sbjct: 498 GIMPNATTYNSLIKQYCIRNNMRATTEIYRGMCAKGVVPDGNTYNILIKGHCKARNMKEA 557
Query: 396 MEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNIL 452
++ M G + + ++ + K K F A +++M G D++ NI
Sbjct: 558 WFLHRDMVGKGFNLTVSSYNALIKGFYKRKKFLEARELFEQMRREGLVADREIYNIF 614
Score = 145 bits (365), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 91/355 (25%), Positives = 172/355 (48%), Gaps = 6/355 (1%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
+I K G +AE+VL M +G AP V +T L++ + + G +A +F MQ
Sbjct: 229 VILLLCKTGKVAEAERVLREMISEGIAPDGVIYTTLIDGFCKLGNVSSAYRLFDEMQKRK 288
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
P +TY ++ + + EA+++F ++ + L+PD+ + +I Y K G +
Sbjct: 289 ISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKR---LEPDEVTYTALIDGYCKEGKMK 345
Query: 222 KARKLFALMAERGVQQSTVTYNSLMSFETNYKEV---SKIYDQMQRAGLQPDVVSYALLI 278
+A L M + G+ + VTY +L EV +++ +M R GL+ ++ +Y L+
Sbjct: 346 EAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANELLHEMCRKGLELNIYTYNSLV 405
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCS 338
N KA ++A+ + ++M AG P Y L+DA+ S + +A + + M
Sbjct: 406 NGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSREMVRAHELLRQMLDRELQ 465
Query: 339 PDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEI 398
P + ++ +++ + + +E EK + + + G +PN TY +LIK Y NN+ EI
Sbjct: 466 PTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKGIMPNATTYNSLIKQYCIRNNMRATTEI 525
Query: 399 YDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILL 453
Y M G+ P+ + ++ + K ++ A +++M GF + N L+
Sbjct: 526 YRGMCAKGVVPDGNTYNILIKGHCKARNMKEAWFLHRDMVGKGFNLTVSSYNALI 580
Score = 122 bits (305), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 89/351 (25%), Positives = 150/351 (42%), Gaps = 41/351 (11%)
Query: 153 IFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIY 212
+ MQ G +P+ TY ++ L + K EAE V ++ E + PD ++ +I
Sbjct: 210 LIEEMQIKGLKPNPYTYNGVILLLCKTGKVAEAERVLREMISE---GIAPDGVIYTTLID 266
Query: 213 MYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETN---YKEVSKIYDQMQRAGLQP 269
+ K G A +LF M +R + +TY +++ E K++ +M L+P
Sbjct: 267 GFCKLGNVSSAYRLFDEMQKRKISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKRLEP 326
Query: 270 DVVSYALLINAYGKARREEEALAVFEEMLDAGVRP---THKA------------------ 308
D V+Y LI+ Y K + +EA ++ +ML G+ P T+ A
Sbjct: 327 DEVTYTALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANELL 386
Query: 309 --------------YNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNA 354
YN L++ +G +DQA + K M PD +YTT++ AY +
Sbjct: 387 HEMCRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKS 446
Query: 355 SDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIF 414
+M A + R++ P V+T+ L+ G+ LE ++ M GI PN T +
Sbjct: 447 REMVRAHELLRQMLDRELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKGIMPNATTY 506
Query: 415 TTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEA 465
+++ Y + + Y+ M + G PD NIL+ A EA
Sbjct: 507 NSLIKQYCIRNNMRATTEIYRGMCAKGVVPDGNTYNILIKGHCKARNMKEA 557
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 66/244 (27%), Positives = 121/244 (49%), Gaps = 6/244 (2%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + + L K G+ + A ++L M +KG ++ ++ +L+ + G A +
Sbjct: 362 NIVTYTALADGLCKCGEVDTANELLHEMCRKGLELNIYTYNSLVNGLCKAGNIDQAVKLM 421
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
+ M+ +G P A+TY ++ + ++ + A E+ +LD E L+P F++++ +
Sbjct: 422 KDMEVAGFHPDAVTYTTLMDAYCKSREMVRAHELLRQMLDRE---LQPTVVTFNVLMNGF 478
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSLM---SFETNYKEVSKIYDQMQRAGLQPDV 271
+G E KL M E+G+ + TYNSL+ N + ++IY M G+ PD
Sbjct: 479 CMSGMLEDGEKLLKWMLEKGIMPNATTYNSLIKQYCIRNNMRATTEIYRGMCAKGVVPDG 538
Query: 272 VSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKC 331
+Y +LI + KAR +EA + +M+ G T +YN L+ F +AR +F+
Sbjct: 539 NTYNILIKGHCKARNMKEAWFLHRDMVGKGFNLTVSSYNALIKGFYKRKKFLEARELFEQ 598
Query: 332 MRRD 335
MRR+
Sbjct: 599 MRRE 602
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 74/284 (26%), Positives = 121/284 (42%), Gaps = 10/284 (3%)
Query: 221 EKARKLFALMAERGVQQSTVTYNS---LMSFETNYKEVSKIYDQMQRAGLQPDVVSYALL 277
E KL M +G++ + TYN L+ E ++ +M G+ PD V Y L
Sbjct: 205 EWVLKLIEEMQIKGLKPNPYTYNGVILLLCKTGKVAEAERVLREMISEGIAPDGVIYTTL 264
Query: 278 INAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRC 337
I+ + K A +F+EM + P Y ++ +G V +A +F M R
Sbjct: 265 IDGFCKLGNVSSAYRLFDEMQKRKISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKRL 324
Query: 338 SPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMME 397
PD +YT ++ Y M+ A ++ Q G PN++TY L G K ++ E
Sbjct: 325 EPDEVTYTALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANE 384
Query: 398 IYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAK 457
+ +M G++ N + ++++ K + D AV K+ME GF PD L+
Sbjct: 385 LLHEMCRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYC 444
Query: 458 TADERNEANELLGNFNHPNNEPGI-------NGLSISVDEEDDD 494
+ E A+ELL +P + NG +S ED +
Sbjct: 445 KSREMVRAHELLRQMLDRELQPTVVTFNVLMNGFCMSGMLEDGE 488
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/220 (24%), Positives = 99/220 (45%), Gaps = 7/220 (3%)
Query: 257 KIYDQMQRAGLQPDVVSYALLINAYGK-------ARREEEALAVFEEMLDAGVRPTHKAY 309
K++D+M GL V S L I+ + A + E L + EEM G++P Y
Sbjct: 167 KLFDKMLNYGLLISVDSCNLFISHLSEDLDGIKIALKGEWVLKLIEEMQIKGLKPNPYTY 226
Query: 310 NILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQ 369
N ++ +G V +A V + M + +PD YTT++ + ++ A + F +++
Sbjct: 227 NGVILLLCKTGKVAEAERVLREMISEGIAPDGVIYTTLIDGFCKLGNVSSAYRLFDEMQK 286
Query: 370 DGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDS 429
P+ ITY +I G + + + +++ +M ++P++ +T ++D Y K
Sbjct: 287 RKISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKRLEPDEVTYTALIDGYCKEGKMKE 346
Query: 430 AVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELL 469
A + +M G P+ L E + ANELL
Sbjct: 347 AFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANELL 386
>gi|302761794|ref|XP_002964319.1| hypothetical protein SELMODRAFT_63559 [Selaginella moellendorffii]
gi|300168048|gb|EFJ34652.1| hypothetical protein SELMODRAFT_63559 [Selaginella moellendorffii]
Length = 384
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 86/302 (28%), Positives = 158/302 (52%), Gaps = 8/302 (2%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + + LI Y G K+ M KG +P+ ++ AL++ YGR G +K A ++
Sbjct: 87 NLVTYTNLIKEYANAGRLQDCRKLFQEMKDKGESPNSWTYNALIQGYGRKGLFKEALELY 146
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDE-EKSPLKPDQKMFHMMIYM 213
M G TY I + ++ + ++ E LLDE + + PDQ ++ ++ +
Sbjct: 147 DEMDGVGCAKDVHTYNIAIAMYGKRGLLEDMER----LLDEMDTKGVPPDQVTYNTLLDV 202
Query: 214 YKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSF---ETNYKEVSKIYDQMQRAGLQPD 270
Y K + KA ++ M E G + + TYN ++S E + E +++++ ++ G+ P+
Sbjct: 203 YAKKSYFVKAHEILREMTEAGYRPNIWTYNIMLSSARKEQSVAEATQLFENLKSKGVVPN 262
Query: 271 VVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFK 330
+V+Y+ +++ YG+ EA +++EM++AG P AY+ L++++ GM +A F+
Sbjct: 263 IVTYSAMLSLYGRHGLYTEAAKLWDEMIEAGCIPCIIAYSGLIESYGHHGMYQEALACFQ 322
Query: 331 CMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVN 390
MR+ PD YT ++ AY A AE + + ++GFVP+ ITYG L++ +A
Sbjct: 323 DMRKSGIVPDTKIYTALMDAYGKAGRCREAELLYFEMTKEGFVPDGITYGILVRAFANAG 382
Query: 391 NL 392
L
Sbjct: 383 RL 384
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 96/361 (26%), Positives = 175/361 (48%), Gaps = 7/361 (1%)
Query: 97 MDFLMLITAYGKQ-GDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFR 155
+ + ++I Y +Q + A ++L M + G P + + L+ GR + AE I
Sbjct: 18 VTYTVIIHGYLRQKSKLDHALRLLEVMKESGKKPDEILYNCLVNGLVNSGRLEAAEKILD 77
Query: 156 RMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYK 215
M+ + +TY ++K + A + ++ ++F + D+ +SP + ++ +I Y
Sbjct: 78 DMKQDKVSANLVTYTNLIKEYANAGRLQDCRKLFQEMKDKGESP---NSWTYNALIQGYG 134
Query: 216 KAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETN---YKEVSKIYDQMQRAGLQPDVV 272
+ G +++A +L+ M G + TYN ++ +++ ++ D+M G+ PD V
Sbjct: 135 RKGLFKEALELYDEMDGVGCAKDVHTYNIAIAMYGKRGLLEDMERLLDEMDTKGVPPDQV 194
Query: 273 SYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCM 332
+Y L++ Y K +A + EM +AG RP YNI+L + V +A +F+ +
Sbjct: 195 TYNTLLDVYAKKSYFVKAHEILREMTEAGYRPNIWTYNIMLSSARKEQSVAEATQLFENL 254
Query: 333 RRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNL 392
+ P+I +Y+ MLS Y A K + + + G +P +I Y LI+ Y
Sbjct: 255 KSKGVVPNIVTYSAMLSLYGRHGLYTEAAKLWDEMIEAGCIPCIIAYSGLIESYGHHGMY 314
Query: 393 EKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNIL 452
++ + + MR +GI P+ I+T +MDAYGK A + Y EM GF PD IL
Sbjct: 315 QEALACFQDMRKSGIVPDTKIYTALMDAYGKAGRCREAELLYFEMTKEGFVPDGITYGIL 374
Query: 453 L 453
+
Sbjct: 375 V 375
Score = 142 bits (357), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 96/352 (27%), Positives = 169/352 (48%), Gaps = 8/352 (2%)
Query: 122 MNKKGYAPSVVSHTALMEAYGR-GGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEAN 180
M K G +VV++T ++ Y R + +A + M+ SG +P + Y ++ V +
Sbjct: 8 MMKDGCEATVVTYTVIIHGYLRQKSKLDHALRLLEVMKESGKKPDEILYNCLVNGLVNSG 67
Query: 181 KFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTV 240
+ + AE++ L D ++ + + + +I Y AG + RKLF M ++G ++
Sbjct: 68 RLEAAEKI---LDDMKQDKVSANLVTYTNLIKEYANAGRLQDCRKLFQEMKDKGESPNSW 124
Query: 241 TYNSLM---SFETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEM 297
TYN+L+ + +KE ++YD+M G DV +Y + I YGK E+ + +EM
Sbjct: 125 TYNALIQGYGRKGLFKEALELYDEMDGVGCAKDVHTYNIAIAMYGKRGLLEDMERLLDEM 184
Query: 298 LDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDM 357
GV P YN LLD +A +A + + M P+I +Y MLS+ +
Sbjct: 185 DTKGVPPDQVTYNTLLDVYAKKSYFVKAHEILREMTEAGYRPNIWTYNIMLSSARKEQSV 244
Query: 358 EGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTI 417
A + F LK G VPN++TY ++ Y + + +++D+M G P ++ +
Sbjct: 245 AEATQLFENLKSKGVVPNIVTYSAMLSLYGRHGLYTEAAKLWDEMIEAGCIPCIIAYSGL 304
Query: 418 MDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELL 469
+++YG + + A+ +++M G PD K L+ A EA ELL
Sbjct: 305 IESYGHHGMYQEALACFQDMRKSGIVPDTKIYTALMDAYGKAGRCREA-ELL 355
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 67/262 (25%), Positives = 119/262 (45%), Gaps = 36/262 (13%)
Query: 256 SKIYDQMQRAGLQPDVVSYALLINAYGKARRE-EEALAVFEEMLDAGVRPTHKAYNILLD 314
++ +M + G + VV+Y ++I+ Y + + + + AL + E M ++G +P YN L++
Sbjct: 2 CSLFYRMMKDGCEATVVTYTVIIHGYLRQKSKLDHALRLLEVMKESGKKPDEILYNCLVN 61
Query: 315 AFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVP 374
SG ++ A + M++D+ S ++ +YT ++ Y NA ++ K F+ +K G P
Sbjct: 62 GLVNSGRLEAAEKILDDMKQDKVSANLVTYTNLIKEYANAGRLQDCRKLFQEMKDKGESP 121
Query: 375 NVITYGTLIKGYAKVNNLEKMMEIYDKMR------------------------------- 403
N TY LI+GY + ++ +E+YD+M
Sbjct: 122 NSWTYNALIQGYGRKGLFKEALELYDEMDGVGCAKDVHTYNIAIAMYGKRGLLEDMERLL 181
Query: 404 ----VNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTA 459
G+ P+Q + T++D Y K F A +EM G+ P+ NI+LS A+
Sbjct: 182 DEMDTKGVPPDQVTYNTLLDVYAKKSYFVKAHEILREMTEAGYRPNIWTYNIMLSSARKE 241
Query: 460 DERNEANELLGNFNHPNNEPGI 481
EA +L N P I
Sbjct: 242 QSVAEATQLFENLKSKGVVPNI 263
>gi|302768589|ref|XP_002967714.1| hypothetical protein SELMODRAFT_63558 [Selaginella moellendorffii]
gi|300164452|gb|EFJ31061.1| hypothetical protein SELMODRAFT_63558 [Selaginella moellendorffii]
Length = 384
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 86/302 (28%), Positives = 158/302 (52%), Gaps = 8/302 (2%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + + LI Y G K+ M KG +P+ ++ AL++ YGR G +K A ++
Sbjct: 87 NLVTYTNLIKEYANTGRLQDCRKLFQEMKDKGESPNSWTYNALIQGYGRKGLFKEALELY 146
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDE-EKSPLKPDQKMFHMMIYM 213
M G TY I + ++ + ++ E LLDE + + PDQ ++ ++ +
Sbjct: 147 DEMDGVGCAKDVHTYNIAIAMYGKRGLLEDMER----LLDEMDTKGVPPDQVTYNTLLDV 202
Query: 214 YKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSF---ETNYKEVSKIYDQMQRAGLQPD 270
Y K + KA ++ M E G + + TYN ++S E + E +++++ ++ G+ P+
Sbjct: 203 YAKKSYFVKAHEILREMTEAGYRPNIWTYNIMLSSARKEQSVAEATQLFENLKSKGVVPN 262
Query: 271 VVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFK 330
+V+Y+ +++ YG+ EA +++EM++AG P AY+ L++++ GM +A F+
Sbjct: 263 IVTYSAMLSLYGRHGLYTEAAKLWDEMIEAGCIPCIIAYSGLIESYGHHGMYQEALACFQ 322
Query: 331 CMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVN 390
MR+ PD YT ++ AY A AE + + ++GFVP+ ITYG L++ +A
Sbjct: 323 DMRKSGIVPDTKIYTALMDAYGKAGRCREAELLYFEMTKEGFVPDGITYGILVRAFANAG 382
Query: 391 NL 392
L
Sbjct: 383 RL 384
Score = 145 bits (366), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 95/361 (26%), Positives = 174/361 (48%), Gaps = 7/361 (1%)
Query: 97 MDFLMLITAYGKQ-GDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFR 155
+ + ++I Y +Q + A ++L M + G P + + L+ GR + AE I
Sbjct: 18 VTYTVIIHGYLRQKSKLDHALRLLEVMKESGKKPDEILYNCLVNGLVNSGRLEAAEKILD 77
Query: 156 RMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYK 215
M+ + +TY ++K + + ++ ++F + D+ +SP + ++ +I Y
Sbjct: 78 DMKRDKVSANLVTYTNLIKEYANTGRLQDCRKLFQEMKDKGESP---NSWTYNALIQGYG 134
Query: 216 KAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETN---YKEVSKIYDQMQRAGLQPDVV 272
+ G +++A +L+ M G + TYN ++ +++ ++ D+M G+ PD V
Sbjct: 135 RKGLFKEALELYDEMDGVGCAKDVHTYNIAIAMYGKRGLLEDMERLLDEMDTKGVPPDQV 194
Query: 273 SYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCM 332
+Y L++ Y K +A + EM +AG RP YNI+L + V +A +F+ +
Sbjct: 195 TYNTLLDVYAKKSYFVKAHEILREMTEAGYRPNIWTYNIMLSSARKEQSVAEATQLFENL 254
Query: 333 RRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNL 392
+ P+I +Y+ MLS Y A K + + + G +P +I Y LI+ Y
Sbjct: 255 KSKGVVPNIVTYSAMLSLYGRHGLYTEAAKLWDEMIEAGCIPCIIAYSGLIESYGHHGMY 314
Query: 393 EKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNIL 452
++ + + MR +GI P+ I+T +MDAYGK A + Y EM GF PD IL
Sbjct: 315 QEALACFQDMRKSGIVPDTKIYTALMDAYGKAGRCREAELLYFEMTKEGFVPDGITYGIL 374
Query: 453 L 453
+
Sbjct: 375 V 375
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 95/352 (26%), Positives = 168/352 (47%), Gaps = 8/352 (2%)
Query: 122 MNKKGYAPSVVSHTALMEAYGR-GGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEAN 180
M K G +VV++T ++ Y R + +A + M+ SG +P + Y ++ V +
Sbjct: 8 MMKDGCEATVVTYTVIIHGYLRQKSKLDHALRLLEVMKESGKKPDEILYNCLVNGLVNSG 67
Query: 181 KFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTV 240
+ + AE++ L D ++ + + + +I Y G + RKLF M ++G ++
Sbjct: 68 RLEAAEKI---LDDMKRDKVSANLVTYTNLIKEYANTGRLQDCRKLFQEMKDKGESPNSW 124
Query: 241 TYNSLM---SFETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEM 297
TYN+L+ + +KE ++YD+M G DV +Y + I YGK E+ + +EM
Sbjct: 125 TYNALIQGYGRKGLFKEALELYDEMDGVGCAKDVHTYNIAIAMYGKRGLLEDMERLLDEM 184
Query: 298 LDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDM 357
GV P YN LLD +A +A + + M P+I +Y MLS+ +
Sbjct: 185 DTKGVPPDQVTYNTLLDVYAKKSYFVKAHEILREMTEAGYRPNIWTYNIMLSSARKEQSV 244
Query: 358 EGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTI 417
A + F LK G VPN++TY ++ Y + + +++D+M G P ++ +
Sbjct: 245 AEATQLFENLKSKGVVPNIVTYSAMLSLYGRHGLYTEAAKLWDEMIEAGCIPCIIAYSGL 304
Query: 418 MDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELL 469
+++YG + + A+ +++M G PD K L+ A EA ELL
Sbjct: 305 IESYGHHGMYQEALACFQDMRKSGIVPDTKIYTALMDAYGKAGRCREA-ELL 355
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 67/262 (25%), Positives = 118/262 (45%), Gaps = 36/262 (13%)
Query: 256 SKIYDQMQRAGLQPDVVSYALLINAYGKARRE-EEALAVFEEMLDAGVRPTHKAYNILLD 314
++ +M + G + VV+Y ++I+ Y + + + + AL + E M ++G +P YN L++
Sbjct: 2 CSLFYRMMKDGCEATVVTYTVIIHGYLRQKSKLDHALRLLEVMKESGKKPDEILYNCLVN 61
Query: 315 AFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVP 374
SG ++ A + M+RD+ S ++ +YT ++ Y N ++ K F+ +K G P
Sbjct: 62 GLVNSGRLEAAEKILDDMKRDKVSANLVTYTNLIKEYANTGRLQDCRKLFQEMKDKGESP 121
Query: 375 NVITYGTLIKGYAKVNNLEKMMEIYDKMR------------------------------- 403
N TY LI+GY + ++ +E+YD+M
Sbjct: 122 NSWTYNALIQGYGRKGLFKEALELYDEMDGVGCAKDVHTYNIAIAMYGKRGLLEDMERLL 181
Query: 404 ----VNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTA 459
G+ P+Q + T++D Y K F A +EM G+ P+ NI+LS A+
Sbjct: 182 DEMDTKGVPPDQVTYNTLLDVYAKKSYFVKAHEILREMTEAGYRPNIWTYNIMLSSARKE 241
Query: 460 DERNEANELLGNFNHPNNEPGI 481
EA +L N P I
Sbjct: 242 QSVAEATQLFENLKSKGVVPNI 263
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 95/199 (47%), Gaps = 14/199 (7%)
Query: 53 TRGQPLPKDLVLGTLVRLKQLKKWNV-VSEVLEWLRIQSW----WDFNEMDFLMLITAYG 107
T+G P P + TL+ + K + V E+L + + W +N +++++
Sbjct: 186 TKGVP-PDQVTYNTLLDVYAKKSYFVKAHEILREMTEAGYRPNIWTYN-----IMLSSAR 239
Query: 108 KQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSAL 167
K+ +A ++ + KG P++V+++A++ YGR G Y A ++ M +G P +
Sbjct: 240 KEQSVAEATQLFENLKSKGVVPNIVTYSAMLSLYGRHGLYTEAAKLWDEMIEAGCIPCII 299
Query: 168 TYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLF 227
Y +++ + ++EA F D KS + PD K++ ++ Y KAG +A L+
Sbjct: 300 AYSGLIESYGHHGMYQEALACFQ---DMRKSGIVPDTKIYTALMDAYGKAGRCREAELLY 356
Query: 228 ALMAERGVQQSTVTYNSLM 246
M + G +TY L+
Sbjct: 357 FEMTKEGFVPDGITYGILV 375
>gi|410110137|gb|AFV61148.1| pentatricopeptide repeat-containing protein 123, partial [Lippia
rubella]
Length = 440
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 95/389 (24%), Positives = 188/389 (48%), Gaps = 39/389 (10%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
LI K D++KA + S + + G+ P +V++ A++ +G+ ++ A ++ M+++G
Sbjct: 56 LIELSRKLCDYSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMKTAG 115
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFM------TLLD--------------------- 194
P+ +Y +L ++VE KF EA VF LLD
Sbjct: 116 VMPNTTSYSTLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLSMAKEAD 175
Query: 195 -----EEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSF- 248
K ++P F+ ++ +Y A + +A LF LM + ++Q+ VTYNS++
Sbjct: 176 KLFWGMRKMGIEPSVVSFNTLLRVYGDAELFGEAIHLFRLMQRKNIEQTVVTYNSMIMIY 235
Query: 249 --ETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTH 306
+++ + + +MQ G++P+ ++Y+ +I+ +GK + + A +F+++ +GV
Sbjct: 236 GKTLEHEKANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQ 295
Query: 307 KAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRR 366
+ ++ A+ +G+V A+ + ++R PD T + A +E A FR+
Sbjct: 296 ILFQTMIVAYERAGLVAHAKRLLHELKR----PDNIPRDTAIHILAGAGRIEEATYVFRQ 351
Query: 367 LKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKD 426
G V ++ + +I +K ++E++DKMR G P+ + +++AYGK ++
Sbjct: 352 AIDAGEVKDITVFERMIHLLSKYKKYSNVVEVFDKMRGLGYFPDSNVIAVVLNAYGKLQE 411
Query: 427 FDSAVVWYKEMESCGFPPDQKAKNILLSL 455
FD A Y EM+ G + +LSL
Sbjct: 412 FDKANDVYMEMQEVGCVFSDEVHFQMLSL 440
Score = 124 bits (312), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 86/327 (26%), Positives = 151/327 (46%), Gaps = 39/327 (11%)
Query: 192 LLDE-EKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFE- 249
L DE + L PD+ + +I + K G ++ A M + V V Y++L+
Sbjct: 2 LFDEMRQRALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSR 61
Query: 250 --TNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHK 307
+Y + I+ +++R+G PD+V+Y +IN +GKA+ EA ++ EM AGV P
Sbjct: 62 KLCDYSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMKTAGVMPNTT 121
Query: 308 AYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRL 367
+Y+ LL + + +A +VF MR +C D+ + M+ Y S + A+K F +
Sbjct: 122 SYSTLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLSMAKEADKLFWGM 181
Query: 368 KQDGFVPNVITYGTLIKGYA---------------KVNNLEK-------MMEIYDK---- 401
++ G P+V+++ TL++ Y + N+E+ M+ IY K
Sbjct: 182 RKMGIEPSVVSFNTLLRVYGDAELFGEAIHLFRLMQRKNIEQTVVTYNSMIMIYGKTLEH 241
Query: 402 ---------MRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNIL 452
M+ GI+PN ++TI+ +GK D A + ++++ S G DQ +
Sbjct: 242 EKANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQILFQTM 301
Query: 453 LSLAKTADERNEANELLGNFNHPNNEP 479
+ + A A LL P+N P
Sbjct: 302 IVAYERAGLVAHAKRLLHELKRPDNIP 328
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 85/190 (44%)
Query: 292 AVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAY 351
+F+EM + P Y+ L+ F G+ D A + + M +DR D+ Y+ ++
Sbjct: 1 GLFDEMRQRALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELS 60
Query: 352 VNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQ 411
D A F RLK+ GF P+++ Y +I + K + + +M+ G+ PN
Sbjct: 61 RKLCDYSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMKTAGVMPNT 120
Query: 412 TIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGN 471
T ++T++ Y +NK F A+ + EM D NI++ + EA++L
Sbjct: 121 TSYSTLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLSMAKEADKLFWG 180
Query: 472 FNHPNNEPGI 481
EP +
Sbjct: 181 MRKMGIEPSV 190
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/242 (23%), Positives = 114/242 (47%), Gaps = 6/242 (2%)
Query: 97 MDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRR 156
+ F L+ YG F +A + M +K +VV++ +++ YG+ ++ A + +
Sbjct: 191 VSFNTLLRVYGDAELFGEAIHLFRLMQRKNIEQTVVTYNSMIMIYGKTLEHEKANNLIQE 250
Query: 157 MQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKK 216
MQS G P+++TY I+ ++ + K A +F L S ++ DQ +F MI Y++
Sbjct: 251 MQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKL---RSSGVEIDQILFQTMIVAYER 307
Query: 217 AGGYEKARKLFA-LMAERGVQQSTVTYNSLMSFETNYKEVSKIYDQMQRAGLQPDVVSYA 275
AG A++L L + + T + +++ +E + ++ Q AG D+ +
Sbjct: 308 AGLVAHAKRLLHELKRPDNIPRDTAIH--ILAGAGRIEEATYVFRQAIDAGEVKDITVFE 365
Query: 276 LLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRD 335
+I+ K ++ + VF++M G P ++L+A+ D+A V+ M+
Sbjct: 366 RMIHLLSKYKKYSNVVEVFDKMRGLGYFPDSNVIAVVLNAYGKLQEFDKANDVYMEMQEV 425
Query: 336 RC 337
C
Sbjct: 426 GC 427
Score = 44.3 bits (103), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 26/123 (21%), Positives = 51/123 (41%)
Query: 363 FFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYG 422
F ++Q P+ TY TLI + K + + KM + + + +++ +++
Sbjct: 2 LFDEMRQRALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSR 61
Query: 423 KNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGIN 482
K D+ A+ + ++ GF PD A N ++++ A EA L+ P
Sbjct: 62 KLCDYSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMKTAGVMPNTT 121
Query: 483 GLS 485
S
Sbjct: 122 SYS 124
>gi|41152687|dbj|BAD08212.1| hypothetical protein [Oryza sativa Indica Group]
gi|46091163|dbj|BAD13710.1| PPR protein [Oryza sativa Indica Group]
gi|67906116|dbj|BAE00068.1| PPR protein [Oryza sativa Indica Group]
gi|114437073|gb|ABI74690.1| fertility restorer [Oryza sativa Indica Group]
Length = 683
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 102/391 (26%), Positives = 182/391 (46%), Gaps = 43/391 (10%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
+I + K+GD +K + M + +P+VV++ +++ A + A + M SG
Sbjct: 94 VINGFFKEGDLDKTYSTYNEMLDQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKSG 153
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKS-PLKPDQKMFHMMIYMYKKAGGY 220
P +TY I+ F + + KEA + L + +S ++PD ++ ++ K G
Sbjct: 154 VMPDCMTYNSIVHGFCSSGQPKEA----IVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRC 209
Query: 221 EKARKLFALMAERGVQQSTVTYNSLM---SFETNYKEVSKIYDQMQRAGLQPDVVSYALL 277
+ARK+F M +RG++ TY +L+ + + E+ + D M R G+ P+ +++L
Sbjct: 210 TEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSIL 269
Query: 278 INAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRC 337
+ AY K + EEA+ VF +M G+ P Y ++ SG V+ A F+ M +
Sbjct: 270 VCAYAKQEKVEEAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGL 329
Query: 338 SP-------------------------------DICSYTTMLSAYVNASDMEG----AEK 362
SP IC T ++ +++ EG +EK
Sbjct: 330 SPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEK 389
Query: 363 FFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYG 422
F + + G P++ITY TLI GY +++ ++ M G+KP+ ++T+++ Y
Sbjct: 390 LFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYSTLINGYC 449
Query: 423 KNKDFDSAVVWYKEMESCGFPPDQKAKNILL 453
K A+V ++EMES G PD NI+L
Sbjct: 450 KISRMKDALVLFREMESSGVSPDIITYNIIL 480
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 91/390 (23%), Positives = 175/390 (44%), Gaps = 41/390 (10%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
+I A K +KA +VL+ M K G P +++ +++ + G+ K A ++M+S G
Sbjct: 129 IIAALCKAQTVDKAMEVLTTMVKSGVMPDCMTYNSIVHGFCSSGQPKEAIVFLKKMRSDG 188
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
P +TY ++ + + EA ++F ++ K LKP+ + ++ Y G
Sbjct: 189 VEPDVVTYNSLMDYLCKNGRCTEARKIFDSM---TKRGLKPEITTYGTLLQGYATKGALV 245
Query: 222 KARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSK---IYDQMQRAGLQPDVVSYALLI 278
+ L LM G+ + ++ L+ ++V + ++ +M++ GL P+ V+Y +I
Sbjct: 246 EMHGLLDLMVRNGIHPNHYVFSILVCAYAKQEKVEEAMLVFSKMRQQGLNPNAVTYGAVI 305
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILL------------------------- 313
K+ R E+A+ FE+M+D G+ P + YN L+
Sbjct: 306 GILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGIC 365
Query: 314 ----------DAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKF 363
D+ G V ++ +F M R PDI +Y+T++ Y A M+ A K
Sbjct: 366 LNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKL 425
Query: 364 FRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGK 423
+ G P+ +TY TLI GY K++ ++ + ++ +M +G+ P+ + I+ +
Sbjct: 426 LASMVSVGMKPDCVTYSTLINGYCKISRMKDALVLFREMESSGVSPDIITYNIILQGLFQ 485
Query: 424 NKDFDSAVVWYKEMESCGFPPDQKAKNILL 453
+ +A Y + G + NI+L
Sbjct: 486 TRRTAAAKELYVGITKSGRQLELSTYNIIL 515
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 91/354 (25%), Positives = 164/354 (46%), Gaps = 6/354 (1%)
Query: 129 PSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEV 188
P VVS++ ++ + + G + + M P+ +TY I+ +A +A EV
Sbjct: 86 PDVVSYSTVINGFFKEGDLDKTYSTYNEMLDQRISPNVVTYNSIIAALCKAQTVDKAMEV 145
Query: 189 FMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSF 248
T++ KS + PD ++ +++ + +G ++A M GV+ VTYNSLM +
Sbjct: 146 LTTMV---KSGVMPDCMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDY 202
Query: 249 ETN---YKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPT 305
E KI+D M + GL+P++ +Y L+ Y E + + M+ G+ P
Sbjct: 203 LCKNGRCTEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPN 262
Query: 306 HKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFR 365
H ++IL+ A+A V++A VF MR+ +P+ +Y ++ + +E A +F
Sbjct: 263 HYVFSILVCAYAKQEKVEEAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFE 322
Query: 366 RLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNK 425
++ +G P I Y +LI G N E+ E+ +M GI N F +I+D++ K
Sbjct: 323 QMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEG 382
Query: 426 DFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEP 479
+ + M G PD + L+ A + +EA +LL + +P
Sbjct: 383 RVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKP 436
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 87/386 (22%), Positives = 174/386 (45%), Gaps = 12/386 (3%)
Query: 97 MDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRR 156
MD+L K G +A K+ M K+G P + ++ L++ Y G +
Sbjct: 200 MDYLC------KNGRCTEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDL 253
Query: 157 MQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKK 216
M +G P+ + I++ + + K +EA VF + + L P+ + +I + K
Sbjct: 254 MVRNGIHPNHYVFSILVCAYAKQEKVEEAMLVFSKM---RQQGLNPNAVTYGAVIGILCK 310
Query: 217 AGGYEKARKLFALMAERGVQQSTVTYNSL---MSFETNYKEVSKIYDQMQRAGLQPDVVS 273
+G E A F M + G+ + YNSL + ++ ++ +M G+ + +
Sbjct: 311 SGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIF 370
Query: 274 YALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMR 333
+ +I+++ K R E+ +F+ M+ GV+P Y+ L+D + ++G +D+A + M
Sbjct: 371 FNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMV 430
Query: 334 RDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLE 393
PD +Y+T+++ Y S M+ A FR ++ G P++ITY +++G +
Sbjct: 431 SVGMKPDCVTYSTLINGYCKISRMKDALVLFREMESSGVSPDIITYNIILQGLFQTRRTA 490
Query: 394 KMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILL 453
E+Y + +G + + + I+ KNK D A+ ++ + + + NI++
Sbjct: 491 AAKELYVGITKSGRQLELSTYNIILHGLCKNKLTDDALRMFQNLCLMDLKLEARTFNIMI 550
Query: 454 SLAKTADERNEANELLGNFNHPNNEP 479
+EA +L F+ P
Sbjct: 551 DALLKVGRNDEAKDLFVAFSSNGLVP 576
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 80/347 (23%), Positives = 164/347 (47%), Gaps = 6/347 (1%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
L+ Y +G + +L M + G P+ + L+ AY + + + A +F +M+ G
Sbjct: 234 LLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVCAYAKQEKVEEAMLVFSKMRQQG 293
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
P+A+TY ++ + ++ + ++A F ++DE L P +++ +I+ +E
Sbjct: 294 LNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDE---GLSPGNIVYNSLIHGLCTCNKWE 350
Query: 222 KARKLFALMAERGVQQSTVTYNSLM---SFETNYKEVSKIYDQMQRAGLQPDVVSYALLI 278
+A +L M +RG+ +T+ +NS++ E E K++D M R G++PD+++Y+ LI
Sbjct: 351 RAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLI 410
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCS 338
+ Y A + +EA + M+ G++P Y+ L++ + + A +F+ M S
Sbjct: 411 DGYCLAGKMDEATKLLASMVSVGMKPDCVTYSTLINGYCKISRMKDALVLFREMESSGVS 470
Query: 339 PDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEI 398
PDI +Y +L A++ + + + G + TY ++ G K + + +
Sbjct: 471 PDIITYNIILQGLFQTRRTAAAKELYVGITKSGRQLELSTYNIILHGLCKNKLTDDALRM 530
Query: 399 YDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPD 445
+ + + +K F ++DA K D A + S G P+
Sbjct: 531 FQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPN 577
Score = 128 bits (322), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 78/325 (24%), Positives = 153/325 (47%), Gaps = 5/325 (1%)
Query: 148 KNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMF 207
++A +F + G P +Y I+L + N+ +EA E+ + D+ PD +
Sbjct: 34 EDARHVFDELLRRGI-PDVFSYNILLNGLCDENRSQEALELLHIMADD-GGDCPPDVVSY 91
Query: 208 HMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSK---IYDQMQR 264
+I + K G +K + M ++ + + VTYNS+++ + V K + M +
Sbjct: 92 STVINGFFKEGDLDKTYSTYNEMLDQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVK 151
Query: 265 AGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQ 324
+G+ PD ++Y +++ + + + +EA+ ++M GV P YN L+D +G +
Sbjct: 152 SGVMPDCMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTE 211
Query: 325 ARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIK 384
AR +F M + P+I +Y T+L Y + + ++G PN + L+
Sbjct: 212 ARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVC 271
Query: 385 GYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPP 444
YAK +E+ M ++ KMR G+ PN + ++ K+ + A++++++M G P
Sbjct: 272 AYAKQEKVEEAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSP 331
Query: 445 DQKAKNILLSLAKTADERNEANELL 469
N L+ T ++ A EL+
Sbjct: 332 GNIVYNSLIHGLCTCNKWERAEELI 356
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 98/398 (24%), Positives = 175/398 (43%), Gaps = 41/398 (10%)
Query: 59 PKDLVLGTLVRLKQLKKWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKV 118
P+ GTL++ K V L L +++ N F +L+ AY KQ +A V
Sbjct: 226 PEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVCAYAKQEKVEEAMLV 285
Query: 119 LSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVE 178
S M ++G P+ V++ A++ + GR ++A F +M G P + Y ++
Sbjct: 286 FSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCT 345
Query: 179 ANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQS 238
NK++ AEE+ + +LD + + F+ +I + K G ++ KLF LM GV+
Sbjct: 346 CNKWERAEELILEMLDR---GICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPD 402
Query: 239 TVTYNSLM---SFETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFE 295
+TY++L+ E +K+ M G++PD V+Y+ LIN Y K R ++AL +F
Sbjct: 403 IITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYSTLINGYCKISRMKDALVLFR 462
Query: 296 EMLDAGVRPTHKAYNILLDAFAIS-----------GMVDQAR--------TVFKCMRRDR 336
EM +GV P YNI+L + G+ R + + +++
Sbjct: 463 EMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITKSGRQLELSTYNIILHGLCKNK 522
Query: 337 CSPD-------IC---------SYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYG 380
+ D +C ++ M+ A + + A+ F +G VPN TY
Sbjct: 523 LTDDALRMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYR 582
Query: 381 TLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIM 418
+ + LE++ +++ M NG + + I+
Sbjct: 583 LMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIV 620
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 91/197 (46%), Gaps = 3/197 (1%)
Query: 288 EEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDR--CSPDICSYT 345
E+A VF+E+L G+ P +YNILL+ +A + M D C PD+ SY+
Sbjct: 34 EDARHVFDELLRRGI-PDVFSYNILLNGLCDENRSQEALELLHIMADDGGDCPPDVVSYS 92
Query: 346 TMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVN 405
T+++ + D++ + + PNV+TY ++I K ++K ME+ M +
Sbjct: 93 TVINGFFKEGDLDKTYSTYNEMLDQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKS 152
Query: 406 GIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEA 465
G+ P+ + +I+ + + A+V+ K+M S G PD N L+ EA
Sbjct: 153 GVMPDCMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEA 212
Query: 466 NELLGNFNHPNNEPGIN 482
++ + +P I
Sbjct: 213 RKIFDSMTKRGLKPEIT 229
>gi|255542744|ref|XP_002512435.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223548396|gb|EEF49887.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 546
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 90/371 (24%), Positives = 178/371 (47%), Gaps = 3/371 (0%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
L++ K G+ E V M ++ P+++S ++ + G+ A I M+ G
Sbjct: 134 LMSGLVKVGEIGDMEFVYKEMIRRRIEPTLISFNIVINGLCKVGKLNKAGDIIEDMKVRG 193
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
+ +TY ++ + + K + + L + + P++ F+++I + K
Sbjct: 194 VSANVITYNTLIDGYCKMGKIGKMYKADAILKEMRADGICPNEVTFNILIDGFCKDKNVS 253
Query: 222 KARKLFALMAERGVQQSTVTYNSLMSFETN---YKEVSKIYDQMQRAGLQPDVVSYALLI 278
A K+FA M +GV+ + VTYNSL++ N E + + DQM + L+P+++++ L+
Sbjct: 254 AAMKVFAEMNRQGVKPNVVTYNSLINGLCNNGKVNEATALRDQMVNSCLKPNIITHNALL 313
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCS 338
N + K + ++A +F++M G+ P YNIL+DA+ ++ A +++ M
Sbjct: 314 NGFCKNKMVKQAGELFDDMPKQGITPNVTTYNILIDAYCKDENMEDAFALYRIMLGKGVC 373
Query: 339 PDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEI 398
PD+ +Y +++ D+E A + ++ITY LI ++K + +
Sbjct: 374 PDVSTYNCLIAGLCRKGDLEAARNLVSEMDTKHLKADLITYNILIDSLCNKGEMKKALRL 433
Query: 399 YDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKT 458
D+M G+KP+Q + T++D Y K + +A+ +ME G + N+L+
Sbjct: 434 LDEMCRKGLKPSQLTYNTMIDGYCKEGNLRAALNLRSQMEKVGRLANVATYNVLIKGFCK 493
Query: 459 ADERNEANELL 469
D+ +AN LL
Sbjct: 494 KDKLEDANGLL 504
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 91/362 (25%), Positives = 174/362 (48%), Gaps = 9/362 (2%)
Query: 97 MDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAY---GRGGRYKNAEAI 153
+ F ++I K G NKA ++ M +G + +V+++ L++ Y G+ G+ A+AI
Sbjct: 164 ISFNIVINGLCKVGKLNKAGDIIEDMKVRGVSANVITYNTLIDGYCKMGKIGKMYKADAI 223
Query: 154 FRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYM 213
+ M++ G P+ +T+ I++ F + A +VF + + +KP+ ++ +I
Sbjct: 224 LKEMRADGICPNEVTFNILIDGFCKDKNVSAAMKVFAEM---NRQGVKPNVVTYNSLING 280
Query: 214 YKKAGGYEKARKLFALMAERGVQQSTVTYNSLMS-FETN--YKEVSKIYDQMQRAGLQPD 270
G +A L M ++ + +T+N+L++ F N K+ +++D M + G+ P+
Sbjct: 281 LCNNGKVNEATALRDQMVNSCLKPNIITHNALLNGFCKNKMVKQAGELFDDMPKQGITPN 340
Query: 271 VVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFK 330
V +Y +LI+AY K E+A A++ ML GV P YN L+ G ++ AR +
Sbjct: 341 VTTYNILIDAYCKDENMEDAFALYRIMLGKGVCPDVSTYNCLIAGLCRKGDLEAARNLVS 400
Query: 331 CMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVN 390
M D+ +Y ++ + N +M+ A + + + G P+ +TY T+I GY K
Sbjct: 401 EMDTKHLKADLITYNILIDSLCNKGEMKKALRLLDEMCRKGLKPSQLTYNTMIDGYCKEG 460
Query: 391 NLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKN 450
NL + + +M G N + ++ + K + A EM G P++
Sbjct: 461 NLRAALNLRSQMEKVGRLANVATYNVLIKGFCKKDKLEDANGLLNEMLEKGLIPNRMTYE 520
Query: 451 IL 452
I+
Sbjct: 521 IV 522
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/229 (27%), Positives = 105/229 (45%), Gaps = 6/229 (2%)
Query: 245 LMSFETNY--KEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGV 302
L+SF NY +E ++I + + + +L+ AY K R F+ D G+
Sbjct: 66 LLSF-INYSTQEQTQILLSVSGDSFCANSIIVDILVWAYAKNLRTRLGFEAFKRASDYGL 124
Query: 303 RPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEK 362
+ + + N L+ G + V+K M R R P + S+ +++ + A
Sbjct: 125 KLSVTSCNPLMSGLVKVGEIGDMEFVYKEMIRRRIEPTLISFNIVINGLCKVGKLNKAGD 184
Query: 363 FFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMME---IYDKMRVNGIKPNQTIFTTIMD 419
+K G NVITY TLI GY K+ + KM + I +MR +GI PN+ F ++D
Sbjct: 185 IIEDMKVRGVSANVITYNTLIDGYCKMGKIGKMYKADAILKEMRADGICPNEVTFNILID 244
Query: 420 AYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANEL 468
+ K+K+ +A+ + EM G P+ N L++ + NEA L
Sbjct: 245 GFCKDKNVSAAMKVFAEMNRQGVKPNVVTYNSLINGLCNNGKVNEATAL 293
>gi|359473390|ref|XP_002268680.2| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
mitochondrial-like [Vitis vinifera]
Length = 748
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 91/357 (25%), Positives = 171/357 (47%), Gaps = 6/357 (1%)
Query: 99 FLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQ 158
+ LI + K G+ + A ++ M K+ +P +++TA++ + GR A+ +F M
Sbjct: 361 YTTLIDGFCKLGNVSSAYRLFDEMQKRKISPDFITYTAVICGLCQTGRVMEADKLFHEMV 420
Query: 159 SSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAG 218
P +TY ++ + + K KEA + +L + L P+ + + K G
Sbjct: 421 CKRLEPDEVTYTALIDGYCKEGKMKEAFSLHNQML---QMGLTPNIVTYTALADGLCKCG 477
Query: 219 GYEKARKLFALMAERGVQQSTVTYNSL---MSFETNYKEVSKIYDQMQRAGLQPDVVSYA 275
+ A +L M +G++ + TYNSL + N + K+ M+ AG PD V+Y
Sbjct: 478 EVDTANELLHEMCRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYT 537
Query: 276 LLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRD 335
L++AY K+R A + +MLD ++PT +N+L++ F +SGM++ + K M
Sbjct: 538 TLMDAYCKSREMVRAHELLRQMLDRELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEK 597
Query: 336 RCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKM 395
P+ +Y +++ Y ++M + +R + G VP+ TY LIKG+ K N+++
Sbjct: 598 GIMPNATTYNSLIKQYCIRNNMRATTEIYRGMCAKGVVPDGNTYNILIKGHCKARNMKEA 657
Query: 396 MEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNIL 452
++ M G + + ++ + K K F A +++M G D++ NI
Sbjct: 658 WFLHRDMVGKGFNLTVSSYNALIKGFYKRKKFLEARELFEQMRREGLVADREIYNIF 714
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 90/357 (25%), Positives = 149/357 (41%), Gaps = 13/357 (3%)
Query: 148 KNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMF 207
K A +F G + +Y II + + EA ++ LL E PD +
Sbjct: 235 KIALKVFVEFPEVGVCWNTASYNIITHSLCQLGRVVEAHQL---LLQMELRGCIPDVISY 291
Query: 208 HMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNS---LMSFETNYKEVSKIYDQMQR 264
+I Y + G ++ KL M +G++ + TYN L+ E ++ +M
Sbjct: 292 STVINGYCQVGELQRVLKLIEEMQIKGLKPNPYTYNGVILLLCKTGKVAEAERVLREMIS 351
Query: 265 AGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQ 324
G+ PD V Y LI+ + K A +F+EM + P Y ++ +G V +
Sbjct: 352 EGIAPDGVIYTTLIDGFCKLGNVSSAYRLFDEMQKRKISPDFITYTAVICGLCQTGRVME 411
Query: 325 ARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIK 384
A +F M R PD +YT ++ Y M+ A ++ Q G PN++TY L
Sbjct: 412 ADKLFHEMVCKRLEPDEVTYTALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALAD 471
Query: 385 GYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPP 444
G K ++ E+ +M G++ N + ++++ K + D AV K+ME GF P
Sbjct: 472 GLCKCGEVDTANELLHEMCRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHP 531
Query: 445 DQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGI-------NGLSISVDEEDDD 494
D L+ + E A+ELL +P + NG +S ED +
Sbjct: 532 DAVTYTTLMDAYCKSREMVRAHELLRQMLDRELQPTVVTFNVLMNGFCMSGMLEDGE 588
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 66/244 (27%), Positives = 121/244 (49%), Gaps = 6/244 (2%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + + L K G+ + A ++L M +KG ++ ++ +L+ + G A +
Sbjct: 462 NIVTYTALADGLCKCGEVDTANELLHEMCRKGLELNIYTYNSLVNGLCKAGNIDQAVKLM 521
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
+ M+ +G P A+TY ++ + ++ + A E+ +LD E L+P F++++ +
Sbjct: 522 KDMEVAGFHPDAVTYTTLMDAYCKSREMVRAHELLRQMLDRE---LQPTVVTFNVLMNGF 578
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSLM---SFETNYKEVSKIYDQMQRAGLQPDV 271
+G E KL M E+G+ + TYNSL+ N + ++IY M G+ PD
Sbjct: 579 CMSGMLEDGEKLLKWMLEKGIMPNATTYNSLIKQYCIRNNMRATTEIYRGMCAKGVVPDG 638
Query: 272 VSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKC 331
+Y +LI + KAR +EA + +M+ G T +YN L+ F +AR +F+
Sbjct: 639 NTYNILIKGHCKARNMKEAWFLHRDMVGKGFNLTVSSYNALIKGFYKRKKFLEARELFEQ 698
Query: 332 MRRD 335
MRR+
Sbjct: 699 MRRE 702
>gi|225452994|ref|XP_002263091.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 588
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 104/421 (24%), Positives = 185/421 (43%), Gaps = 23/421 (5%)
Query: 66 TLVRL-KQLKKWNVVSEVLEW-LRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMN 123
TL+ L +Q+ + + +V + I S N +DF F+ K+L
Sbjct: 88 TLLSLSRQMDSFGIPPDVYTLAIVINSLCHLNRVDF-----------AFSALAKIL---- 132
Query: 124 KKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFK 183
K G+ P + T L+ G+ A +F +M G +P+ +TY ++ +
Sbjct: 133 KLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTS 192
Query: 184 EAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYN 243
A + ++ E+ +P+ +F +I K +A +F+ M +G+ + VTYN
Sbjct: 193 AAIRLLRSM---EQGNCQPNVVVFSTLIDSLCKDRQVTEAFNIFSEMITKGISPNIVTYN 249
Query: 244 SL---MSFETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDA 300
SL + +K V+ + ++M + + PDV + +++A K EA V + M+
Sbjct: 250 SLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHR 309
Query: 301 GVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGA 360
GV P YN L+D + VD A VF M C ++ SY T+++ Y ++ A
Sbjct: 310 GVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKA 369
Query: 361 EKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDA 420
F + + PN +TY TLI G V L+ + ++ +M G P+ + T+ D
Sbjct: 370 MYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTLSDY 429
Query: 421 YGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPG 480
KN+ D A+ K +E + PD + +L A E +A +L N + +P
Sbjct: 430 LCKNRHLDKAMALLKAIEGSNWDPDIQIYTTILDGMCRAGELEDARDLFSNLSSKGLQPN 489
Query: 481 I 481
+
Sbjct: 490 V 490
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 99/399 (24%), Positives = 168/399 (42%), Gaps = 41/399 (10%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + + LI K G+ + A ++L M + P+VV + L+++ + + A IF
Sbjct: 174 NVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPNVVVFSTLIDSLCKDRQVTEAFNIF 233
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
M + G P+ +TY ++ + ++K + ++D S + PD + ++
Sbjct: 234 SEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVD---SKIMPDVFTLNTVVDAL 290
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVS---KIYDQMQRAGLQPDV 271
K G +A + +M RGV+ + VTYN+LM EV K++D M +V
Sbjct: 291 CKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDCVANV 350
Query: 272 VSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISG----------- 320
+SY LIN Y K + ++A+ +FEEM + P YN L+ G
Sbjct: 351 ISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISLFHE 410
Query: 321 ------------------------MVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASD 356
+D+A + K + PDI YTT+L A +
Sbjct: 411 MVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTILDGMCRAGE 470
Query: 357 MEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTT 416
+E A F L G PNV TY +I G K L + +++ +M NG PN +
Sbjct: 471 LEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEMNKNGCSPNDCTYNL 530
Query: 417 IMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSL 455
I + +N + + +EM + GF D +L+ +
Sbjct: 531 ITRGFLRNNEALRTIELLEEMLARGFSVDVSTTTLLVGM 569
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 59/264 (22%), Positives = 112/264 (42%), Gaps = 3/264 (1%)
Query: 221 EKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSKIYD---QMQRAGLQPDVVSYALL 277
++A F M + STV +N L++ K S + QM G+ PDV + A++
Sbjct: 52 DEALSTFNRMLHKQPPPSTVDFNRLLTSIAKTKHHSTLLSLSRQMDSFGIPPDVYTLAIV 111
Query: 278 INAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRC 337
IN+ R + A + ++L G +P + L+ + G + +A +F M +
Sbjct: 112 INSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGEGF 171
Query: 338 SPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMME 397
P++ +Y T+++ + A + R ++Q PNV+ + TLI K + +
Sbjct: 172 QPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPNVVVFSTLIDSLCKDRQVTEAFN 231
Query: 398 IYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAK 457
I+ +M GI PN + +++ K ++ EM PD N ++
Sbjct: 232 IFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVVDALC 291
Query: 458 TADERNEANELLGNFNHPNNEPGI 481
EA++++ H EP +
Sbjct: 292 KEGMVAEAHDVVDMMIHRGVEPNV 315
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/241 (24%), Positives = 110/241 (45%), Gaps = 9/241 (3%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + + LI Y K +KA + M+++ P+ V++ L+ GR ++A ++F
Sbjct: 349 NVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISLF 408
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDE-EKSPLKPDQKMFHMMIYM 213
M + G P +TY+ + + +A M LL E S PD +++ ++
Sbjct: 409 HEMVARGQIPDLVTYRTLSDYLCKNRHLDKA----MALLKAIEGSNWDPDIQIYTTILDG 464
Query: 214 YKKAGGYEKARKLFALMAERGVQQSTVTYNSL---MSFETNYKEVSKIYDQMQRAGLQPD 270
+AG E AR LF+ ++ +G+Q + TYN + + + E SK++ +M + G P+
Sbjct: 465 MCRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEMNKNGCSPN 524
Query: 271 VVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFK 330
+Y L+ + + + + EEML G +L+ + G+ DQ+
Sbjct: 525 DCTYNLITRGFLRNNEALRTIELLEEMLARGFSVDVSTTTLLVGMLSDDGL-DQSVKQIL 583
Query: 331 C 331
C
Sbjct: 584 C 584
Score = 43.5 bits (101), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 36/170 (21%), Positives = 74/170 (43%), Gaps = 12/170 (7%)
Query: 31 WRRLMNQIEEVG---SAVAVLRSERTRGQPLPKDLVLGTL----VRLKQLKKWNVVSEVL 83
+ L++ + VG A+++ RGQ +P + TL + + L K + + +
Sbjct: 388 YNTLIHGLCHVGRLQDAISLFHEMVARGQ-IPDLVTYRTLSDYLCKNRHLDKAMALLKAI 446
Query: 84 EWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGR 143
E S WD + + ++ + G+ A + S ++ KG P+V ++ ++ +
Sbjct: 447 EG----SNWDPDIQIYTTILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCK 502
Query: 144 GGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLL 193
G A +F M +G P+ TY +I + F+ N+ E+ +L
Sbjct: 503 QGLLAEASKLFSEMNKNGCSPNDCTYNLITRGFLRNNEALRTIELLEEML 552
Score = 43.5 bits (101), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 34/173 (19%), Positives = 65/173 (37%)
Query: 322 VDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGT 381
+D+A + F M + P + +L++ R++ G P+V T
Sbjct: 51 LDEALSTFNRMLHKQPPPSTVDFNRLLTSIAKTKHHSTLLSLSRQMDSFGIPPDVYTLAI 110
Query: 382 LIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCG 441
+I +N ++ K+ G +P+ T FTT++ A+ + +M G
Sbjct: 111 VINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGEG 170
Query: 442 FPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGINGLSISVDEEDDD 494
F P+ L++ + A LL + N +P + S +D D
Sbjct: 171 FQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPNVVVFSTLIDSLCKD 223
>gi|224142151|ref|XP_002324422.1| predicted protein [Populus trichocarpa]
gi|222865856|gb|EEF02987.1| predicted protein [Populus trichocarpa]
Length = 453
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 96/353 (27%), Positives = 174/353 (49%), Gaps = 10/353 (2%)
Query: 131 VVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFM 190
V S T LM G+ + A +IF + G +P+ +TY ++ FK +
Sbjct: 13 VRSRTKLMNVLIGKGKPREAHSIFNSLMDEGHKPTLITYTTLVAALTRQKLFKS---ILR 69
Query: 191 TLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFET 250
+ E++ +KPD +F+ +I + ++G ++A KLF M E G + +T T+N+L+
Sbjct: 70 LISKVEENGMKPDSILFNSIINAFSESGNMKEAMKLFRKMKESGCKPTTSTFNTLIKGYG 129
Query: 251 N---YKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHK 307
N +E K+ + +Q G++P+ +Y +L+ A+ EEA + +M+ +G++P
Sbjct: 130 NAGKTEEALKLLEFLQDGGVKPNQRTYNILVRAWCNKENMEEAWNMVYKMVASGMQPDAV 189
Query: 308 AYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRL 367
YN L A+A G +A + M R +P+ + + +++ Y +M A +F R+
Sbjct: 190 TYNTLARAYAEKGETIRAEEMILEMLNRRVTPNERTCSIIVNGYCKEGNMVDASRFVFRM 249
Query: 368 KQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDF 427
K+ G +PN+ + +LIKG+ + E + E+ M NG++P+ F+TIM+A+
Sbjct: 250 KELGVLPNLFVFNSLIKGFLDTMDTEGVDEVLTLMEENGVRPDVVTFSTIMNAWSSAGRM 309
Query: 428 DSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFN----HPN 476
D + +M PD A +IL A E +A +L + HPN
Sbjct: 310 DKCKEIFNDMVKAEIEPDIHAFSILAKGYVRAGEPEKAESILTSMRKYGVHPN 362
Score = 147 bits (371), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 90/326 (27%), Positives = 166/326 (50%), Gaps = 6/326 (1%)
Query: 99 FLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQ 158
F LI YG G +A K+L F+ G P+ ++ L+ A+ + A + +M
Sbjct: 121 FNTLIKGYGNAGKTEEALKLLEFLQDGGVKPNQRTYNILVRAWCNKENMEEAWNMVYKMV 180
Query: 159 SSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAG 218
+SG +P A+TY + + + E + AEE+ + +L+ + P+++ +++ Y K G
Sbjct: 181 ASGMQPDAVTYNTLARAYAEKGETIRAEEMILEMLNRR---VTPNERTCSIIVNGYCKEG 237
Query: 219 GYEKARKLFALMAERGVQQSTVTYNSLMS--FETNYKE-VSKIYDQMQRAGLQPDVVSYA 275
A + M E GV + +NSL+ +T E V ++ M+ G++PDVV+++
Sbjct: 238 NMVDASRFVFRMKELGVLPNLFVFNSLIKGFLDTMDTEGVDEVLTLMEENGVRPDVVTFS 297
Query: 276 LLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRD 335
++NA+ A R ++ +F +M+ A + P A++IL + +G ++A ++ MR+
Sbjct: 298 TIMNAWSSAGRMDKCKEIFNDMVKAEIEPDIHAFSILAKGYVRAGEPEKAESILTSMRKY 357
Query: 336 RCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKM 395
P++ TT++S + +A ME A K + ++ + G PN+ TY TLI GY + K
Sbjct: 358 GVHPNVVICTTVISGWCSAGKMEHAMKVYEKMCEIGVSPNLKTYETLIWGYGEAKQPLKA 417
Query: 396 MEIYDKMRVNGIKPNQTIFTTIMDAY 421
E+ M G+ P + I DA+
Sbjct: 418 EELLQVMEEKGVFPKKGTMQLIADAW 443
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 100/403 (24%), Positives = 193/403 (47%), Gaps = 49/403 (12%)
Query: 109 QGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALT 168
+G +A + + + +G+ P+++++T L+ A R +K+ + +++ +G +P ++
Sbjct: 26 KGKPREAHSIFNSLMDEGHKPTLITYTTLVAALTRQKLFKSILRLISKVEENGMKPDSIL 85
Query: 169 YQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFA 228
+ I+ F E+ KEA ++F + ++S KP F+ +I Y AG E+A KL
Sbjct: 86 FNSIINAFSESGNMKEAMKLFRKM---KESGCKPTTSTFNTLIKGYGNAGKTEEALKLLE 142
Query: 229 LMAERGVQQSTVTYNSLMSFETNYKEVSKIYD---QMQRAGLQPDVVSYALLINAY---G 282
+ + GV+ + TYN L+ N + + + ++ +M +G+QPD V+Y L AY G
Sbjct: 143 FLQDGGVKPNQRTYNILVRAWCNKENMEEAWNMVYKMVASGMQPDAVTYNTLARAYAEKG 202
Query: 283 KARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISG-MVDQARTVFKCMRRDRCSPDI 341
+ R EE + EML+ V P + +I+++ + G MVD +R VF+ M+ P++
Sbjct: 203 ETIRAEEMIL---EMLNRRVTPNERTCSIIVNGYCKEGNMVDASRFVFR-MKELGVLPNL 258
Query: 342 CSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLI------------------ 383
+ +++ +++ D EG ++ ++++G P+V+T+ T++
Sbjct: 259 FVFNSLIKGFLDTMDTEGVDEVLTLMEENGVRPDVVTFSTIMNAWSSAGRMDKCKEIFND 318
Query: 384 -----------------KGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKD 426
KGY + EK I MR G+ PN I TT++ +
Sbjct: 319 MVKAEIEPDIHAFSILAKGYVRAGEPEKAESILTSMRKYGVHPNVVICTTVISGWCSAGK 378
Query: 427 FDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELL 469
+ A+ Y++M G P+ K L+ A + +A ELL
Sbjct: 379 MEHAMKVYEKMCEIGVSPNLKTYETLIWGYGEAKQPLKAEELL 421
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 91/394 (23%), Positives = 177/394 (44%), Gaps = 41/394 (10%)
Query: 97 MDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRR 156
+ + L+ A +Q F +++S + + G P + +++ A+ G K A +FR+
Sbjct: 49 ITYTTLVAALTRQKLFKSILRLISKVEENGMKPDSILFNSIINAFSESGNMKEAMKLFRK 108
Query: 157 MQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKK 216
M+ SG +P+ T+ ++K + A K +EA ++ L D +KP+Q+ +++++ +
Sbjct: 109 MKESGCKPTTSTFNTLIKGYGNAGKTEEALKLLEFLQD---GGVKPNQRTYNILVRAWCN 165
Query: 217 AGGYEKARKLFALMAERGVQQSTVTYNSLM------------------------------ 246
E+A + M G+Q VTYN+L
Sbjct: 166 KENMEEAWNMVYKMVASGMQPDAVTYNTLARAYAEKGETIRAEEMILEMLNRRVTPNERT 225
Query: 247 --------SFETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEML 298
E N + S+ +M+ G+ P++ + LI + E V M
Sbjct: 226 CSIIVNGYCKEGNMVDASRFVFRMKELGVLPNLFVFNSLIKGFLDTMDTEGVDEVLTLME 285
Query: 299 DAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDME 358
+ GVRP ++ +++A++ +G +D+ + +F M + PDI +++ + YV A + E
Sbjct: 286 ENGVRPDVVTFSTIMNAWSSAGRMDKCKEIFNDMVKAEIEPDIHAFSILAKGYVRAGEPE 345
Query: 359 GAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIM 418
AE +++ G PNV+ T+I G+ +E M++Y+KM G+ PN + T++
Sbjct: 346 KAESILTSMRKYGVHPNVVICTTVISGWCSAGKMEHAMKVYEKMCEIGVSPNLKTYETLI 405
Query: 419 DAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNIL 452
YG+ K A + ME G P + ++
Sbjct: 406 WGYGEAKQPLKAEELLQVMEEKGVFPKKGTMQLI 439
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 54/234 (23%), Positives = 116/234 (49%), Gaps = 6/234 (2%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
NE +++ Y K+G+ A + + M + G P++ +L++ + + + +
Sbjct: 222 NERTCSIIVNGYCKEGNMVDASRFVFRMKELGVLPNLFVFNSLIKGFLDTMDTEGVDEVL 281
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
M+ +G RP +T+ I+ + A + + +E+F D K+ ++PD F ++ Y
Sbjct: 282 TLMEENGVRPDVVTFSTIMNAWSSAGRMDKCKEIFN---DMVKAEIEPDIHAFSILAKGY 338
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETN---YKEVSKIYDQMQRAGLQPDV 271
+AG EKA + M + GV + V +++S + + K+Y++M G+ P++
Sbjct: 339 VRAGEPEKAESILTSMRKYGVHPNVVICTTVISGWCSAGKMEHAMKVYEKMCEIGVSPNL 398
Query: 272 VSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQA 325
+Y LI YG+A++ +A + + M + GV P ++ DA+ G++ ++
Sbjct: 399 KTYETLIWGYGEAKQPLKAEELLQVMEEKGVFPKKGTMQLIADAWRAIGLLSES 452
>gi|297852926|ref|XP_002894344.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297340186|gb|EFH70603.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 650
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 94/361 (26%), Positives = 172/361 (47%), Gaps = 9/361 (2%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
+E + ++I G+ G +++A + + M +G +VV + LM+ +G A +F
Sbjct: 269 DEYSYTIMIRTMGRIGKYDEAVGLFNEMITEGLTLNVVGYNTLMQVLAKGKMVDKAIQVF 328
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
RM +G RP+ TY ++L L V + + + E S Q ++ ++
Sbjct: 329 SRMVETGCRPNEYTYSLVLNLLVAEGQLVRLDGIV------EISKRYMTQGIYSYLVRTL 382
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSLM-SFETNYKEVSKI--YDQMQRAGLQPDV 271
K G +A +LF M V+ +Y S++ S K + I ++ G+ D
Sbjct: 383 SKLGHVSEAHRLFCDMWSFPVKGERDSYMSMLESLCGAGKTIEAIEMLSKIHEKGVVTDT 442
Query: 272 VSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKC 331
+ Y + +A GK ++ +FE+M G P YNIL+ +F G VD+A +F+
Sbjct: 443 MMYNTVFSALGKLKQISHIHDLFEKMKKDGPSPDIFTYNILISSFGRVGEVDEAINIFEE 502
Query: 332 MRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNN 391
+ R C PDI SY ++++ D++ A F+ +++ G P+V+TY TL++ + K
Sbjct: 503 LERSDCKPDIISYNSLINCLGKNGDVDEAHVRFKEMQEKGLNPDVVTYSTLMECFGKTER 562
Query: 392 LEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNI 451
+E ++++M V G +PN + ++D K+ AV Y +M+ G PD +
Sbjct: 563 VEMAYSLFEEMLVKGCQPNIVTYNILLDCLEKSGRTAEAVDLYTKMKQQGLTPDSITYTV 622
Query: 452 L 452
L
Sbjct: 623 L 623
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 94/418 (22%), Positives = 175/418 (41%), Gaps = 41/418 (9%)
Query: 107 GKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSA 166
G GD + L + K G + ++ L++AY R A ++ ++ G +
Sbjct: 179 GFFGDTEDLQMCLRLVKKWGLKMNSFTYKCLLQAYLRSRDSSKAFDVYCEIRRGGHKLDI 238
Query: 167 LTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKL 226
Y ++L + K A +VF D +K + D+ + +MI + G Y++A L
Sbjct: 239 FAYNMLLDALAKDEK---ACQVFE---DMKKRHCRRDEYSYTIMIRTMGRIGKYDEAVGL 292
Query: 227 FALMAERGVQQSTVTYNSLMSFETNYKEVSK---IYDQMQRAGLQPDVVSYALLIN---A 280
F M G+ + V YN+LM K V K ++ +M G +P+ +Y+L++N A
Sbjct: 293 FNEMITEGLTLNVVGYNTLMQVLAKGKMVDKAIQVFSRMVETGCRPNEYTYSLVLNLLVA 352
Query: 281 YGKARREE-----------------------------EALAVFEEMLDAGVRPTHKAYNI 311
G+ R + EA +F +M V+ +Y
Sbjct: 353 EGQLVRLDGIVEISKRYMTQGIYSYLVRTLSKLGHVSEAHRLFCDMWSFPVKGERDSYMS 412
Query: 312 LLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDG 371
+L++ +G +A + + D Y T+ SA + F ++K+DG
Sbjct: 413 MLESLCGAGKTIEAIEMLSKIHEKGVVTDTMMYNTVFSALGKLKQISHIHDLFEKMKKDG 472
Query: 372 FVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAV 431
P++ TY LI + +V +++ + I++++ + KP+ + ++++ GKN D D A
Sbjct: 473 PSPDIFTYNILISSFGRVGEVDEAINIFEELERSDCKPDIISYNSLINCLGKNGDVDEAH 532
Query: 432 VWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGINGLSISVD 489
V +KEM+ G PD + L+ + A L +P I +I +D
Sbjct: 533 VRFKEMQEKGLNPDVVTYSTLMECFGKTERVEMAYSLFEEMLVKGCQPNIVTYNILLD 590
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 76/386 (19%), Positives = 154/386 (39%), Gaps = 38/386 (9%)
Query: 146 RYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQK 205
R+ +I M S + T I++ F + E++ M L +K LK +
Sbjct: 151 RFDRVRSILDSMVKSNVHGNISTVNILIGFF------GDTEDLQMCLRLVKKWGLKMNSF 204
Query: 206 MFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSKIYDQMQRA 265
+ ++ Y ++ KA ++ + G + YN L+ ++ ++++ M++
Sbjct: 205 TYKCLLQAYLRSRDSSKAFDVYCEIRRGGHKLDIFAYNMLLDALAKDEKACQVFEDMKKR 264
Query: 266 GLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQA 325
+ D SY ++I G+ + +EA+ +F EM+ G+ YN L+ A MVD+A
Sbjct: 265 HCRRDEYSYTIMIRTMGRIGKYDEAVGLFNEMITEGLTLNVVGYNTLMQVLAKGKMVDKA 324
Query: 326 RTVFKCMRRDRCSPDICSYTTMLSAYVNASDM---EGAEKFFRRLKQDGFVPNVI----- 377
VF M C P+ +Y+ +L+ V + +G + +R G ++
Sbjct: 325 IQVFSRMVETGCRPNEYTYSLVLNLLVAEGQLVRLDGIVEISKRYMTQGIYSYLVRTLSK 384
Query: 378 ------------------------TYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTI 413
+Y ++++ + +E+ K+ G+ + +
Sbjct: 385 LGHVSEAHRLFCDMWSFPVKGERDSYMSMLESLCGAGKTIEAIEMLSKIHEKGVVTDTMM 444
Query: 414 FTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFN 473
+ T+ A GK K +++M+ G PD NIL+S E +EA +
Sbjct: 445 YNTVFSALGKLKQISHIHDLFEKMKKDGPSPDIFTYNILISSFGRVGEVDEAINIFEELE 504
Query: 474 HPNNEPGINGLSISVDEEDDDDDDDE 499
+ +P I + ++ + D DE
Sbjct: 505 RSDCKPDIISYNSLINCLGKNGDVDE 530
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/158 (21%), Positives = 81/158 (51%), Gaps = 3/158 (1%)
Query: 101 MLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSS 160
+LI+++G+ G+ ++A + + + P ++S+ +L+ G+ G A F+ MQ
Sbjct: 482 ILISSFGRVGEVDEAINIFEELERSDCKPDIISYNSLINCLGKNGDVDEAHVRFKEMQEK 541
Query: 161 GPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGY 220
G P +TY +++ F + + + A +F +L + +P+ +++++ +K+G
Sbjct: 542 GLNPDVVTYSTLMECFGKTERVEMAYSLFEEMLVKG---CQPNIVTYNILLDCLEKSGRT 598
Query: 221 EKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSKI 258
+A L+ M ++G+ ++TY L ++ S+I
Sbjct: 599 AEAVDLYTKMKQQGLTPDSITYTVLERLQSGSHGKSRI 636
>gi|255661174|gb|ACU25756.1| pentatricopeptide repeat-containing protein [Junellia uniflora]
Length = 426
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 96/374 (25%), Positives = 182/374 (48%), Gaps = 37/374 (9%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
LI K D++KA + S + + G+ P +V++ A++ +G+ ++ A ++ M+++G
Sbjct: 50 LIELSRKLCDYSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMRTAG 109
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
P +Y +L ++VE KF EA VF + E K L D ++MI +Y + G +
Sbjct: 110 VTPDTASYSTLLTMYVENKKFLEALSVFAEM-REIKCLL--DLTTCNIMIDVYGQLGMAK 166
Query: 222 KARKLFALMAERGVQQSTVTYNSLMSFETN---YKEVSKIYDQMQRAGLQPDVVSYALLI 278
+A KLF M + G++ + V+YN+L+ + + E ++ MQR ++ +VV+Y ++
Sbjct: 167 EADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMM 226
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCS 338
YGK E+A + +EM + G+ P Y+ ++ + G +D+A +F+ +R
Sbjct: 227 MIYGKTLEHEKANNLIQEMQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVD 286
Query: 339 PDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVP------------------------ 374
D Y TM+ AY A + A++ LK+ +P
Sbjct: 287 IDQVLYQTMIVAYERAGLVAHAKRLLHELKRPDNIPRDIAIHILAGAGRIEEATWVFRQA 346
Query: 375 -------NVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDF 427
++ + +I ++K ++E++D+MR G P+ + +++AYGK +F
Sbjct: 347 IDAGEVKDITVFERMIHLFSKYKKYGNVVEVFDEMRGLGYFPDSNVIALVLNAYGKLHEF 406
Query: 428 DSAVVWYKEMESCG 441
D A Y EM+ G
Sbjct: 407 DKANDVYMEMQEVG 420
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 85/318 (26%), Positives = 145/318 (45%), Gaps = 38/318 (11%)
Query: 200 LKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFE---TNYKEVS 256
L PD+ + +I + K G ++ A M + V V Y++L+ +Y +
Sbjct: 5 LSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDYSKAI 64
Query: 257 KIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAF 316
I+ +++R+G PD+V+Y +IN +GKA+ EA ++ EM AGV P +Y+ LL +
Sbjct: 65 SIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVTPDTASYSTLLTMY 124
Query: 317 AISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNV 376
+ +A +VF MR +C D+ + M+ Y + A+K F +++ G PNV
Sbjct: 125 VENKKFLEALSVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNV 184
Query: 377 ITYGTLIKGYAKV---------------NNLEK-------MMEIYDK------------- 401
++Y TL++ Y N+E+ MM IY K
Sbjct: 185 VSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLIQE 244
Query: 402 MRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADE 461
M+ GI+PN ++TI+ +GK D A + ++++ S G DQ ++ + A
Sbjct: 245 MQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVDIDQVLYQTMIVAYERAGL 304
Query: 462 RNEANELLGNFNHPNNEP 479
A LL P+N P
Sbjct: 305 VAHAKRLLHELKRPDNIP 322
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 79/181 (43%)
Query: 301 GVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGA 360
+ P Y+ L+ F G+ D A + + M +DR D+ Y+ ++ D A
Sbjct: 4 ALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDYSKA 63
Query: 361 EKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDA 420
F RLK+ GF P+++ Y +I + K + + +MR G+ P+ ++T++
Sbjct: 64 ISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVTPDTASYSTLLTM 123
Query: 421 YGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPG 480
Y +NK F A+ + EM D NI++ + EA++L EP
Sbjct: 124 YVENKKFLEALSVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPN 183
Query: 481 I 481
+
Sbjct: 184 V 184
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 56/244 (22%), Positives = 114/244 (46%), Gaps = 6/244 (2%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + + L+ YG F +A + M +K +VV++ ++M YG+ ++ A +
Sbjct: 183 NVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLI 242
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
+ MQ+ G P+++TY I+ ++ + K A +F L S + DQ ++ MI Y
Sbjct: 243 QEMQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKL---RSSGVDIDQVLYQTMIVAY 299
Query: 215 KKAGGYEKARKLFA-LMAERGVQQSTVTYNSLMSFETNYKEVSKIYDQMQRAGLQPDVVS 273
++AG A++L L + + + +++ +E + ++ Q AG D+
Sbjct: 300 ERAGLVAHAKRLLHELKRPDNIPRDIAIH--ILAGAGRIEEATWVFRQAIDAGEVKDITV 357
Query: 274 YALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMR 333
+ +I+ + K ++ + VF+EM G P ++L+A+ D+A V+ M+
Sbjct: 358 FERMIHLFSKYKKYGNVVEVFDEMRGLGYFPDSNVIALVLNAYGKLHEFDKANDVYMEMQ 417
Query: 334 RDRC 337
C
Sbjct: 418 EVGC 421
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/123 (23%), Positives = 64/123 (52%)
Query: 333 RRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNL 392
R SPD +Y+T+++ + + A + ++++QD +++ Y LI+ K+ +
Sbjct: 1 RERALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDY 60
Query: 393 EKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNIL 452
K + I+ +++ +G P+ + +++ +GK K F A EM + G PD + + L
Sbjct: 61 SKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVTPDTASYSTL 120
Query: 453 LSL 455
L++
Sbjct: 121 LTM 123
>gi|356574876|ref|XP_003555569.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08610-like [Glycine max]
Length = 589
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 91/352 (25%), Positives = 169/352 (48%), Gaps = 10/352 (2%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
LI + ++G ++A K L+ M G P +++ ++ + GR ++A + M SG
Sbjct: 171 LIRGFIRKGLVDEACKTLNKMVMSGGVPDTITYNMVIGGLCKNGRLRSALDLVEDMSLSG 230
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
P A+TY I++ + F +A + D+ + P + ++I + K G
Sbjct: 231 CSPDAITYNSIIRCLFDKGNFNQAVNFWR---DQLRKGCPPYLITYTVLIELVCKYCGAA 287
Query: 222 KARKLFALMAERGVQQSTVTYNSLMSFETN---YKEVSKIYDQMQRAGLQPDVVSYALLI 278
+A ++ MA G VTYNSL++ + Y++ + + + G+QP+ V+Y LI
Sbjct: 288 RALEVLEDMAMEGCYPDIVTYNSLVNLTSKQGKYEDTALVILNLLSHGMQPNAVTYNTLI 347
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCS 338
++ +E + + M + PTH YNILL+ SG++D+A + + M + CS
Sbjct: 348 HSLINHGYWDEVDDILKIMNETSSPPTHVTYNILLNGLCKSGLLDRAISFYSTMVTENCS 407
Query: 339 PDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEI 398
PDI +Y T+LS ++ + L P ++TY +I G A++ ++E E+
Sbjct: 408 PDIITYNTLLSGLCKEGFIDEGIQLLNLLVGTSCSPGLVTYNIVIDGLARLGSMESAKEL 467
Query: 399 YDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKN 450
YD+M GI P++ +++ + + + A KEM +Q+ KN
Sbjct: 468 YDEMVDKGIIPDEITHSSLTWGFCRADQLEEATELLKEMSM----KEQRIKN 515
Score = 125 bits (313), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 82/364 (22%), Positives = 152/364 (41%), Gaps = 6/364 (1%)
Query: 109 QGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALT 168
+G A +++ M +K P S T L+ + R G A +M SG P +T
Sbjct: 143 RGKLTVAARLIDVMARKSQIPHFPSCTNLIRGFIRKGLVDEACKTLNKMVMSGGVPDTIT 202
Query: 169 YQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFA 228
Y +++ + + + A ++ D S PD ++ +I G + +A +
Sbjct: 203 YNMVIGGLCKNGRLRSALDLVE---DMSLSGCSPDAITYNSIIRCLFDKGNFNQAVNFWR 259
Query: 229 LMAERGVQQSTVTYNSLMSFETNYKEVSK---IYDQMQRAGLQPDVVSYALLINAYGKAR 285
+G +TY L+ Y ++ + + M G PD+V+Y L+N K
Sbjct: 260 DQLRKGCPPYLITYTVLIELVCKYCGAARALEVLEDMAMEGCYPDIVTYNSLVNLTSKQG 319
Query: 286 REEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYT 345
+ E+ V +L G++P YN L+ + G D+ + K M P +Y
Sbjct: 320 KYEDTALVILNLLSHGMQPNAVTYNTLIHSLINHGYWDEVDDILKIMNETSSPPTHVTYN 379
Query: 346 TMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVN 405
+L+ + ++ A F+ + + P++ITY TL+ G K +++ +++ + +
Sbjct: 380 ILLNGLCKSGLLDRAISFYSTMVTENCSPDIITYNTLLSGLCKEGFIDEGIQLLNLLVGT 439
Query: 406 GIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEA 465
P + ++D + +SA Y EM G PD+ + L AD+ EA
Sbjct: 440 SCSPGLVTYNIVIDGLARLGSMESAKELYDEMVDKGIIPDEITHSSLTWGFCRADQLEEA 499
Query: 466 NELL 469
ELL
Sbjct: 500 TELL 503
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/237 (21%), Positives = 116/237 (48%), Gaps = 6/237 (2%)
Query: 97 MDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRR 156
+ + +LI K +A +VL M +G P +V++ +L+ + G+Y++ +
Sbjct: 271 ITYTVLIELVCKYCGAARALEVLEDMAMEGCYPDIVTYNSLVNLTSKQGKYEDTALVILN 330
Query: 157 MQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKK 216
+ S G +P+A+TY ++ + + E +++ + +++E SP P +++++ K
Sbjct: 331 LLSHGMQPNAVTYNTLIHSLINHGYWDEVDDI-LKIMNETSSP--PTHVTYNILLNGLCK 387
Query: 217 AGGYEKARKLFALMAERGVQQSTVTYNSLMSF---ETNYKEVSKIYDQMQRAGLQPDVVS 273
+G ++A ++ M +TYN+L+S E E ++ + + P +V+
Sbjct: 388 SGLLDRAISFYSTMVTENCSPDIITYNTLLSGLCKEGFIDEGIQLLNLLVGTSCSPGLVT 447
Query: 274 YALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFK 330
Y ++I+ + E A +++EM+D G+ P ++ L F + +++A + K
Sbjct: 448 YNIVIDGLARLGSMESAKELYDEMVDKGIIPDEITHSSLTWGFCRADQLEEATELLK 504
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/269 (21%), Positives = 119/269 (44%), Gaps = 6/269 (2%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
L+ KQG + V+ + G P+ V++ L+ + G + + I + M +
Sbjct: 311 LVNLTSKQGKYEDTALVILNLLSHGMQPNAVTYNTLIHSLINHGYWDEVDDILKIMNETS 370
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
P+ +TY I+L ++ A + T++ E SP D ++ ++ K G +
Sbjct: 371 SPPTHVTYNILLNGLCKSGLLDRAISFYSTMVTENCSP---DIITYNTLLSGLCKEGFID 427
Query: 222 KARKLFALMAERGVQQSTVTYNSL---MSFETNYKEVSKIYDQMQRAGLQPDVVSYALLI 278
+ +L L+ VTYN + ++ + + ++YD+M G+ PD ++++ L
Sbjct: 428 EGIQLLNLLVGTSCSPGLVTYNIVIDGLARLGSMESAKELYDEMVDKGIIPDEITHSSLT 487
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCS 338
+ +A + EEA + +EM R + AY ++ VD A V M + +C+
Sbjct: 488 WGFCRADQLEEATELLKEMSMKEQRIKNTAYRCVILGLCRQKKVDIAIQVLDLMVKGQCN 547
Query: 339 PDICSYTTMLSAYVNASDMEGAEKFFRRL 367
PD Y+ ++ A + ++ A + L
Sbjct: 548 PDERIYSALIKAVADGGMLKEANDLHQTL 576
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 47/224 (20%), Positives = 96/224 (42%)
Query: 256 SKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDA 315
+++ D M R P S LI + + +EA +M+ +G P YN+++
Sbjct: 150 ARLIDVMARKSQIPHFPSCTNLIRGFIRKGLVDEACKTLNKMVMSGGVPDTITYNMVIGG 209
Query: 316 FAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPN 375
+G + A + + M CSPD +Y +++ + + A F+R + G P
Sbjct: 210 LCKNGRLRSALDLVEDMSLSGCSPDAITYNSIIRCLFDKGNFNQAVNFWRDQLRKGCPPY 269
Query: 376 VITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYK 435
+ITY LI+ K + +E+ + M + G P+ + ++++ K ++ +
Sbjct: 270 LITYTVLIELVCKYCGAARALEVLEDMAMEGCYPDIVTYNSLVNLTSKQGKYEDTALVIL 329
Query: 436 EMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEP 479
+ S G P+ N L+ +E +++L N ++ P
Sbjct: 330 NLLSHGMQPNAVTYNTLIHSLINHGYWDEVDDILKIMNETSSPP 373
Score = 55.5 bits (132), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 33/147 (22%), Positives = 64/147 (43%)
Query: 310 NILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQ 369
N +L G + A + M R P S T ++ ++ ++ A K ++
Sbjct: 134 NEILQRLCSRGKLTVAARLIDVMARKSQIPHFPSCTNLIRGFIRKGLVDEACKTLNKMVM 193
Query: 370 DGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDS 429
G VP+ ITY +I G K L +++ + M ++G P+ + +I+ +F+
Sbjct: 194 SGGVPDTITYNMVIGGLCKNGRLRSALDLVEDMSLSGCSPDAITYNSIIRCLFDKGNFNQ 253
Query: 430 AVVWYKEMESCGFPPDQKAKNILLSLA 456
AV ++++ G PP +L+ L
Sbjct: 254 AVNFWRDQLRKGCPPYLITYTVLIELV 280
>gi|18407744|ref|NP_564809.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169913|sp|Q9CAM8.1|PP100_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g63150
gi|12323259|gb|AAG51611.1|AC010795_15 unknown protein; 70626-72515 [Arabidopsis thaliana]
gi|15810427|gb|AAL07101.1| unknown protein [Arabidopsis thaliana]
gi|24030501|gb|AAN41397.1| unknown protein [Arabidopsis thaliana]
gi|332195941|gb|AEE34062.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 629
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 104/444 (23%), Positives = 210/444 (47%), Gaps = 40/444 (9%)
Query: 32 RRLMNQIEEVGSAVAVLRSERTRGQPLPKDLVLGTLVR-LKQLKKWNVVSEVLEWLRIQS 90
R ++ I +V AV L + + +P P + L+ + ++ K+ +V + E ++Q+
Sbjct: 55 RNRLSDIIKVDDAVD-LFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGE--QMQT 111
Query: 91 WWDFNEM-DFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKN 149
+++ + + I + ++ + A VL+ M K GY P +V+ ++L+ Y R +
Sbjct: 112 LGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISD 171
Query: 150 AEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVF-------------------- 189
A A+ +M G +P T+ ++ NK EA +
Sbjct: 172 AVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVN 231
Query: 190 -----------MTLLDE-EKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQ 237
+ LL++ E + +K + +F+ +I K E A LF M +G++
Sbjct: 232 GLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRP 291
Query: 238 STVTYNSLMSFETNY---KEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVF 294
+ VTYNSL++ NY + S++ M + P+VV++ LI+A+ K + EA +
Sbjct: 292 NVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLH 351
Query: 295 EEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNA 354
EEM+ + P YN+L++ F + +D+A+ +FK M C P+I +Y T+++ +
Sbjct: 352 EEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKC 411
Query: 355 SDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIF 414
+E + FR + Q G V N +TY T+I+G+ + + + ++ +M N + + +
Sbjct: 412 KRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTY 471
Query: 415 TTIMDAYGKNKDFDSAVVWYKEME 438
+ ++ D+A+V +K ++
Sbjct: 472 SILLHGLCSYGKLDTALVIFKYLQ 495
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 89/389 (22%), Positives = 175/389 (44%), Gaps = 38/389 (9%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
++ K+GD + A +L+ M +VV ++++ + + A +F M++ G
Sbjct: 229 VVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKG 288
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
RP+ +TY ++ ++ +A + +L+++ + P+ F+ +I + K G
Sbjct: 289 IRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKK---INPNVVTFNALIDAFFKEGKLV 345
Query: 222 KARKLFALMAERGVQQSTVTYNSLM---SFETNYKEVSKIYDQMQRAGLQPDVVSYALLI 278
+A KL M +R + T+TYN L+ E +++ M P++ +Y LI
Sbjct: 346 EAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLI 405
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCS 338
N + K +R E+ + +F EM G+ Y ++ F +G D A+ VFK M +R
Sbjct: 406 NGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVP 465
Query: 339 PDICSYTTMLSAYVNASDMEGAEKFFRRLKQ---------------------------DG 371
DI +Y+ +L + ++ A F+ L++ D
Sbjct: 466 TDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEAWDL 525
Query: 372 FV-----PNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKD 426
F P+V+TY T+I G L++ +++ KM+ +G PN + T++ A ++ D
Sbjct: 526 FCSLSIKPDVVTYNTMISGLCSKRLLQEADDLFRKMKEDGTLPNSGTYNTLIRANLRDCD 585
Query: 427 FDSAVVWYKEMESCGFPPDQKAKNILLSL 455
++ KEM S GF D +++ ++
Sbjct: 586 RAASAELIKEMRSSGFVGDASTISLVTNM 614
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 70/270 (25%), Positives = 125/270 (46%), Gaps = 3/270 (1%)
Query: 223 ARKLFALMAERGVQQSTVTYNSLMSFETN---YKEVSKIYDQMQRAGLQPDVVSYALLIN 279
A LF M + S V +N L+S ++ V + +QMQ G+ D+ +Y++ IN
Sbjct: 67 AVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFIN 126
Query: 280 AYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSP 339
+ + + ALAV +M+ G P + LL+ + S + A + M P
Sbjct: 127 CFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKP 186
Query: 340 DICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIY 399
D ++TT++ + A ++ Q G P+++TYGT++ G K +++ + +
Sbjct: 187 DTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLL 246
Query: 400 DKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTA 459
+KM IK N IF TI+D+ K + + AV + EME+ G P+ N L++
Sbjct: 247 NKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNY 306
Query: 460 DERNEANELLGNFNHPNNEPGINGLSISVD 489
++A+ LL N P + + +D
Sbjct: 307 GRWSDASRLLSNMLEKKINPNVVTFNALID 336
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 74/325 (22%), Positives = 141/325 (43%), Gaps = 8/325 (2%)
Query: 149 NAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKS-PLKPDQKMF 207
+A +F M S P PS + + +L + NKF E+ ++L ++ ++ + D +
Sbjct: 66 DAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKF----ELVISLGEQMQTLGISHDLYTY 121
Query: 208 HMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVS---KIYDQMQR 264
+ I + + A + A M + G + VT +SL++ + K +S + DQM
Sbjct: 122 SIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVE 181
Query: 265 AGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQ 324
G +PD ++ LI+ + EA+A+ ++M+ G +P Y +++ G +D
Sbjct: 182 MGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDL 241
Query: 325 ARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIK 384
A + M R ++ + T++ + +E A F ++ G PNV+TY +LI
Sbjct: 242 ALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLIN 301
Query: 385 GYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPP 444
+ M I PN F ++DA+ K A ++EM P
Sbjct: 302 CLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDP 361
Query: 445 DQKAKNILLSLAKTADERNEANELL 469
D N+L++ + +EA ++
Sbjct: 362 DTITYNLLINGFCMHNRLDEAKQMF 386
Score = 55.5 bits (132), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 37/170 (21%), Positives = 78/170 (45%)
Query: 276 LLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRD 335
+L N + ++A+ +F +M+ + P+ +N LL A A + ++ + M+
Sbjct: 53 ILRNRLSDIIKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTL 112
Query: 336 RCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKM 395
S D+ +Y+ ++ + S + A ++ + G+ P+++T +L+ GY +
Sbjct: 113 GISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDA 172
Query: 396 MEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPD 445
+ + D+M G KP+ FTT++ + AV +M G PD
Sbjct: 173 VALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPD 222
>gi|410110145|gb|AFV61152.1| pentatricopeptide repeat-containing protein 123, partial [Nashia
inaguensis]
Length = 433
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 98/374 (26%), Positives = 181/374 (48%), Gaps = 37/374 (9%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
LI K D++KA + S + + G+ P +V++ A++ +G+ ++ A ++ M+++G
Sbjct: 53 LIELSXKLCDYSKAISIFSRLKRSGFXPDLVAYNAMINVFGKAKLFREARSLISEMKTAG 112
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
P+ +Y +L ++VE KF EA VF + + E K L D ++MI +Y + G +
Sbjct: 113 VMPNTTSYSTLLTMYVENKKFLEALSVF-SEMREIKCLL--DLTTCNIMIDVYGQLGMAK 169
Query: 222 KARKLFALMAERGVQQSTVTYNSLMSFETN---YKEVSKIYDQMQRAGLQPDVVSYALLI 278
+A KLF M + G++ S V+YN+L+ + + E ++ MQR ++ +VV+Y ++
Sbjct: 170 EADKLFWGMRKMGIEPSVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMM 229
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCS 338
YGK E+A + +EM G+ P Y+ ++ + G +D+A +F+ +R
Sbjct: 230 MIYGKTLEHEKANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVE 289
Query: 339 PDICSYTTMLSAY-------------------------------VNASDMEGAEKFFRRL 367
D + TM+ AY A +E A FR+
Sbjct: 290 IDQILFQTMIVAYERAGLVAHAKRLLHELKRPDNIPRDTAIHILAGAGRIEEATYVFRQA 349
Query: 368 KQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDF 427
G V ++ + +I +K ++E++DK R G P+ + +++AYGK ++F
Sbjct: 350 IDAGXVKDITVFERMIHLLSKYKKYSNVVEVFDKXRGLGYFPDSDVIAIVLNAYGKLQEF 409
Query: 428 DSAVVWYKEMESCG 441
D A Y EM+ G
Sbjct: 410 DKANDVYMEMQEVG 423
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 84/326 (25%), Positives = 154/326 (47%), Gaps = 6/326 (1%)
Query: 157 MQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKK 216
M+ P TY ++ F + F +A ++ +++++ P D ++ +I + K
Sbjct: 3 MRQRALSPDRYTYSTLITHFGKEGLF-DAAXSWLQKMEQDQVP--GDLILYSNLIELSXK 59
Query: 217 AGGYEKARKLFALMAERGVQQSTVTYNSLMSF---ETNYKEVSKIYDQMQRAGLQPDVVS 273
Y KA +F+ + G V YN++++ ++E + +M+ AG+ P+ S
Sbjct: 60 LCDYSKAISIFSRLKRSGFXPDLVAYNAMINVFGKAKLFREARSLISEMKTAGVMPNTTS 119
Query: 274 YALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMR 333
Y+ L+ Y + ++ EAL+VF EM + NI++D + GM +A +F MR
Sbjct: 120 YSTLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMR 179
Query: 334 RDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLE 393
+ P + SY T+L Y +A A FR +++ NV+TY +++ Y K E
Sbjct: 180 KMGIEPSVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHE 239
Query: 394 KMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILL 453
K + +M+ GI+PN ++TI+ +GK D A + ++++ S G DQ ++
Sbjct: 240 KANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQILFQTMI 299
Query: 454 SLAKTADERNEANELLGNFNHPNNEP 479
+ A A LL P+N P
Sbjct: 300 VAYERAGLVAHAKRLLHELKRPDNIP 325
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 73/303 (24%), Positives = 155/303 (51%), Gaps = 6/303 (1%)
Query: 122 MNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANK 181
M ++ +P +++ L+ +G+ G + A + ++M+ + Y +++L +
Sbjct: 3 MRQRALSPDRYTYSTLITHFGKEGLFDAAXSWLQKMEQDQVPGDLILYSNLIELSXKLCD 62
Query: 182 FKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVT 241
+ +A +F L ++S PD ++ MI ++ KA + +AR L + M GV +T +
Sbjct: 63 YSKAISIFSRL---KRSGFXPDLVAYNAMINVFGKAKLFREARSLISEMKTAGVMPNTTS 119
Query: 242 YNSLMSFETNYK---EVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEML 298
Y++L++ K E ++ +M+ D+ + ++I+ YG+ +EA +F M
Sbjct: 120 YSTLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMR 179
Query: 299 DAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDME 358
G+ P+ +YN LL + + + +A +F+ M+R ++ +Y +M+ Y + E
Sbjct: 180 KMGIEPSVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHE 239
Query: 359 GAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIM 418
A + ++ G PN ITY T+I + KV L++ ++ K+R +G++ +Q +F T++
Sbjct: 240 KANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQILFQTMI 299
Query: 419 DAY 421
AY
Sbjct: 300 VAY 302
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 46/187 (24%), Positives = 83/187 (44%)
Query: 295 EEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNA 354
+EM + P Y+ L+ F G+ D A + + M +D+ D+ Y+ ++
Sbjct: 1 DEMRQRALSPDRYTYSTLITHFGKEGLFDAAXSWLQKMEQDQVPGDLILYSNLIELSXKL 60
Query: 355 SDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIF 414
D A F RLK+ GF P+++ Y +I + K + + +M+ G+ PN T +
Sbjct: 61 CDYSKAISIFSRLKRSGFXPDLVAYNAMINVFGKAKLFREARSLISEMKTAGVMPNTTSY 120
Query: 415 TTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNH 474
+T++ Y +NK F A+ + EM D NI++ + EA++L
Sbjct: 121 STLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRK 180
Query: 475 PNNEPGI 481
EP +
Sbjct: 181 MGIEPSV 187
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 78/331 (23%), Positives = 136/331 (41%), Gaps = 51/331 (15%)
Query: 48 LRSERTRGQPLPKDLVLGTLVRL-----KQLKKWNVVSEVLEWLRIQSWWDFNEMDFLML 102
L SE +P TL+ + K L+ +V SE+ E I+ D + ++
Sbjct: 104 LISEMKTAGVMPNTTSYSTLLTMYVENKKFLEALSVFSEMRE---IKCLLDLTTCN--IM 158
Query: 103 ITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFR------- 155
I YG+ G +A+K+ M K G PSVVS+ L+ YG + A +FR
Sbjct: 159 IDVYGQLGMAKEADKLFWGMRKMGIEPSVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNI 218
Query: 156 ----------------------------RMQSSGPRPSALTYQIILKLFVEANKFKEAEE 187
MQS G P+++TY I+ ++ + K A
Sbjct: 219 EQNVVTYNSMMMIYGKTLEHEKANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAM 278
Query: 188 VFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFA-LMAERGVQQSTVTYNSLM 246
+F L S ++ DQ +F MI Y++AG A++L L + + T + ++
Sbjct: 279 LFQKL---RSSGVEIDQILFQTMIVAYERAGLVAHAKRLLHELKRPDNIPRDTAIH--IL 333
Query: 247 SFETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTH 306
+ +E + ++ Q AG D+ + +I+ K ++ + VF++ G P
Sbjct: 334 AGAGRIEEATYVFRQAIDAGXVKDITVFERMIHLLSKYKKYSNVVEVFDKXRGLGYFPDS 393
Query: 307 KAYNILLDAFAISGMVDQARTVFKCMRRDRC 337
I+L+A+ D+A V+ M+ C
Sbjct: 394 DVIAIVLNAYGKLQEFDKANDVYMEMQEVGC 424
Score = 41.6 bits (96), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 25/119 (21%), Positives = 49/119 (41%)
Query: 367 LKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKD 426
++Q P+ TY TLI + K + KM + + + +++ +++ K D
Sbjct: 3 MRQRALSPDRYTYSTLITHFGKEGLFDAAXSWLQKMEQDQVPGDLILYSNLIELSXKLCD 62
Query: 427 FDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGINGLS 485
+ A+ + ++ GF PD A N ++++ A EA L+ P S
Sbjct: 63 YSKAISIFSRLKRSGFXPDLVAYNAMINVFGKAKLFREARSLISEMKTAGVMPNTTSYS 121
>gi|255661176|gb|ACU25757.1| pentatricopeptide repeat-containing protein [Mulguraea
asparagoides]
Length = 426
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 97/374 (25%), Positives = 181/374 (48%), Gaps = 37/374 (9%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
LI K D++KA + S + + G+ P +V++ A++ +G ++ A ++ M+++G
Sbjct: 50 LIELSRKLCDYSKAISIFSRLKRSGFMPDLVAYNAMINVFGXAKLFREARSLISEMRTAG 109
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
P+ +Y +L ++VE KF EA VF + E K L D ++MI +Y + G +
Sbjct: 110 VMPNTASYSTLLTMYVENKKFLEALSVFAEM-REIKCLL--DLTTCNIMIDVYGQLGMAK 166
Query: 222 KARKLFALMAERGVQQSTVTYNSLMSFETN---YKEVSKIYDQMQRAGLQPDVVSYALLI 278
+A KLF M + G++ + V+YN+L+ + + E ++ MQR ++ +VV+Y ++
Sbjct: 167 EADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMM 226
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCS 338
YGK E+A + +EM G+ P Y+ ++ + G +D+A +F+ +R
Sbjct: 227 MIYGKTLEHEKANNLIQEMQHRGIEPNSITYSTIISIWGKVGKLDRAAVLFQKLRSSGVE 286
Query: 339 PDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVP------------------------ 374
D Y TM+ AY A + A++ LK+ +P
Sbjct: 287 IDQVLYQTMIVAYERAGLVAHAKRLLHELKRPDNIPRDIAIHILAGAGRIEEATWVFRQA 346
Query: 375 -------NVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDF 427
++ + +I ++K ++E++DKMR G P+ + +++AYGK +F
Sbjct: 347 IDAGEVKDITVFERMIHLFSKYKKYGNVVEVFDKMRGLGYFPDSNVIALVLNAYGKLHEF 406
Query: 428 DSAVVWYKEMESCG 441
D A Y EM+ G
Sbjct: 407 DKANDVYMEMQEVG 420
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 85/318 (26%), Positives = 144/318 (45%), Gaps = 38/318 (11%)
Query: 200 LKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFE---TNYKEVS 256
L PD+ + +I + K G ++ A M + V V Y++L+ +Y +
Sbjct: 5 LSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDYSKAI 64
Query: 257 KIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAF 316
I+ +++R+G PD+V+Y +IN +G A+ EA ++ EM AGV P +Y+ LL +
Sbjct: 65 SIFSRLKRSGFMPDLVAYNAMINVFGXAKLFREARSLISEMRTAGVMPNTASYSTLLTMY 124
Query: 317 AISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNV 376
+ +A +VF MR +C D+ + M+ Y + A+K F +++ G PNV
Sbjct: 125 VENKKFLEALSVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNV 184
Query: 377 ITYGTLIKGYAKV---------------NNLEK-------MMEIYDK------------- 401
++Y TL++ Y N+E+ MM IY K
Sbjct: 185 VSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLIQE 244
Query: 402 MRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADE 461
M+ GI+PN ++TI+ +GK D A V ++++ S G DQ ++ + A
Sbjct: 245 MQHRGIEPNSITYSTIISIWGKVGKLDRAAVLFQKLRSSGVEIDQVLYQTMIVAYERAGL 304
Query: 462 RNEANELLGNFNHPNNEP 479
A LL P+N P
Sbjct: 305 VAHAKRLLHELKRPDNIP 322
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 79/181 (43%)
Query: 301 GVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGA 360
+ P Y+ L+ F G+ D A + + M +DR D+ Y+ ++ D A
Sbjct: 4 ALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDYSKA 63
Query: 361 EKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDA 420
F RLK+ GF+P+++ Y +I + + + +MR G+ PN ++T++
Sbjct: 64 ISIFSRLKRSGFMPDLVAYNAMINVFGXAKLFREARSLISEMRTAGVMPNTASYSTLLTM 123
Query: 421 YGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPG 480
Y +NK F A+ + EM D NI++ + EA++L EP
Sbjct: 124 YVENKKFLEALSVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPN 183
Query: 481 I 481
+
Sbjct: 184 V 184
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/241 (24%), Positives = 109/241 (45%), Gaps = 37/241 (15%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + + L+ YG F +A + M +K +VV++ ++M YG+ ++ A +
Sbjct: 183 NVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLI 242
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
+ MQ G P+++TY I+ ++ + K A +F L S ++ DQ ++ MI Y
Sbjct: 243 QEMQHRGIEPNSITYSTIISIWGKVGKLDRAAVLFQKL---RSSGVEIDQVLYQTMIVAY 299
Query: 215 KKAGGYEKARKLF---------------ALMAERG-VQQSTVTYNS-------------- 244
++AG A++L ++A G ++++T +
Sbjct: 300 ERAGLVAHAKRLLHELKRPDNIPRDIAIHILAGAGRIEEATWVFRQAIDAGEVKDITVFE 359
Query: 245 ----LMSFETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDA 300
L S Y V +++D+M+ G PD AL++NAYGK ++A V+ EM +
Sbjct: 360 RMIHLFSKYKKYGNVVEVFDKMRGLGYFPDSNVIALVLNAYGKLHEFDKANDVYMEMQEV 419
Query: 301 G 301
G
Sbjct: 420 G 420
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 27/123 (21%), Positives = 63/123 (51%)
Query: 333 RRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNL 392
R SPD +Y+T+++ + + A + ++++QD +++ Y LI+ K+ +
Sbjct: 1 RERALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDY 60
Query: 393 EKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNIL 452
K + I+ +++ +G P+ + +++ +G K F A EM + G P+ + + L
Sbjct: 61 SKAISIFSRLKRSGFMPDLVAYNAMINVFGXAKLFREARSLISEMRTAGVMPNTASYSTL 120
Query: 453 LSL 455
L++
Sbjct: 121 LTM 123
>gi|147768816|emb|CAN62673.1| hypothetical protein VITISV_031897 [Vitis vinifera]
Length = 653
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 104/422 (24%), Positives = 185/422 (43%), Gaps = 23/422 (5%)
Query: 65 GTLVRL-KQLKKWNVVSEVLEW-LRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFM 122
TL+ L +Q+ + + +V + I S N +DF F+ K+L
Sbjct: 87 STLLSLSRQMDSFGIPPDVYTLAIVINSLCHLNRVDF-----------AFSALAKIL--- 132
Query: 123 NKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKF 182
K G+ P + T L+ G+ A +F +M G +P+ +TY ++ +
Sbjct: 133 -KLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNT 191
Query: 183 KEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTY 242
A + ++ E+ +P+ +F +I K +A +F+ M +G+ + VTY
Sbjct: 192 SAAIRLLRSM---EQGNCQPNVVVFSTLIDSLCKDRQVTEAFNIFSEMITKGISPNIVTY 248
Query: 243 NSL---MSFETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLD 299
NSL + +K V+ + ++M + + PDV + +++A K EA V + M+
Sbjct: 249 NSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIH 308
Query: 300 AGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEG 359
GV P YN L+D + VD A VF M C ++ SY T+++ Y ++
Sbjct: 309 RGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVDK 368
Query: 360 AEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMD 419
A F + + PN +TY TLI G V L+ + ++ +M G P+ + T+ D
Sbjct: 369 AMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTLSD 428
Query: 420 AYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEP 479
KN+ D A+ K +E + PD + +L A E +A +L N + +P
Sbjct: 429 YLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTILDGMCRAGELEDARDLFSNLSSKGLQP 488
Query: 480 GI 481
+
Sbjct: 489 NV 490
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 99/399 (24%), Positives = 168/399 (42%), Gaps = 41/399 (10%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + + LI K G+ + A ++L M + P+VV + L+++ + + A IF
Sbjct: 174 NVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPNVVVFSTLIDSLCKDRQVTEAFNIF 233
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
M + G P+ +TY ++ + ++K + ++D S + PD + ++
Sbjct: 234 SEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVD---SKIMPDVFTLNTVVDAL 290
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVS---KIYDQMQRAGLQPDV 271
K G +A + +M RGV+ + VTYN+LM EV K++D M +V
Sbjct: 291 CKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDCVANV 350
Query: 272 VSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISG----------- 320
+SY LIN Y K + ++A+ +FEEM + P YN L+ G
Sbjct: 351 ISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISLFHE 410
Query: 321 ------------------------MVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASD 356
+D+A + K + PDI YTT+L A +
Sbjct: 411 MVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTILDGMCRAGE 470
Query: 357 MEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTT 416
+E A F L G PNV TY +I G K L + +++ +M NG PN +
Sbjct: 471 LEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEMNKNGCSPNDCTYNL 530
Query: 417 IMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSL 455
I + +N + + +EM + GF D +L+ +
Sbjct: 531 ITRGFLRNNEALRTIELLEEMLARGFSVDVSTTTLLVGM 569
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/264 (22%), Positives = 112/264 (42%), Gaps = 3/264 (1%)
Query: 221 EKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSKIYD---QMQRAGLQPDVVSYALL 277
++A F M + STV +N L++ K S + QM G+ PDV + A++
Sbjct: 52 DEALSTFNRMLHKQPPPSTVDFNRLLTSIAKTKHHSTLLSLSRQMDSFGIPPDVYTLAIV 111
Query: 278 INAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRC 337
IN+ R + A + ++L G +P + L+ + G + +A +F M +
Sbjct: 112 INSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGEGF 171
Query: 338 SPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMME 397
P++ +Y T+++ + A + R ++Q PNV+ + TLI K + +
Sbjct: 172 QPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPNVVVFSTLIDSLCKDRQVTEAFN 231
Query: 398 IYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAK 457
I+ +M GI PN + +++ K ++ EM PD N ++
Sbjct: 232 IFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVVDALC 291
Query: 458 TADERNEANELLGNFNHPNNEPGI 481
EA++++ H EP +
Sbjct: 292 KEGMVAEAHDVVDMMIHRGVEPNV 315
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/241 (24%), Positives = 110/241 (45%), Gaps = 9/241 (3%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + + LI Y K +KA + M+++ P+ V++ L+ GR ++A ++F
Sbjct: 349 NVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISLF 408
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDE-EKSPLKPDQKMFHMMIYM 213
M + G P +TY+ + + +A M LL E S PD +++ ++
Sbjct: 409 HEMVARGQIPDLVTYRTLSDYLCKNRHLDKA----MALLKAIEGSNWDPDIQIYTTILDG 464
Query: 214 YKKAGGYEKARKLFALMAERGVQQSTVTYNSL---MSFETNYKEVSKIYDQMQRAGLQPD 270
+AG E AR LF+ ++ +G+Q + TYN + + + E SK++ +M + G P+
Sbjct: 465 MCRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEMNKNGCSPN 524
Query: 271 VVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFK 330
+Y L+ + + + + EEML G +L+ + G+ DQ+
Sbjct: 525 DCTYNLITRGFLRNNEALRTIELLEEMLARGFSVDVSTTTLLVGMLSDDGL-DQSVKQIL 583
Query: 331 C 331
C
Sbjct: 584 C 584
Score = 43.9 bits (102), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 34/173 (19%), Positives = 65/173 (37%)
Query: 322 VDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGT 381
+D+A + F M + P + +L++ R++ G P+V T
Sbjct: 51 LDEALSTFNRMLHKQPPPSTVDFNRLLTSIAKTKHHSTLLSLSRQMDSFGIPPDVYTLAI 110
Query: 382 LIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCG 441
+I +N ++ K+ G +P+ T FTT++ A+ + +M G
Sbjct: 111 VINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGEG 170
Query: 442 FPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGINGLSISVDEEDDD 494
F P+ L++ + A LL + N +P + S +D D
Sbjct: 171 FQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPNVVVFSTLIDSLCKD 223
Score = 43.1 bits (100), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 36/171 (21%), Positives = 74/171 (43%), Gaps = 12/171 (7%)
Query: 30 NWRRLMNQIEEVG---SAVAVLRSERTRGQPLPKDLVLGTL----VRLKQLKKWNVVSEV 82
+ L++ + VG A+++ RGQ +P + TL + + L K + +
Sbjct: 387 TYNTLIHGLCHVGRLQDAISLFHEMVARGQ-IPDLVTYRTLSDYLCKNRHLDKAMALLKA 445
Query: 83 LEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYG 142
+E S WD + + ++ + G+ A + S ++ KG P+V ++ ++
Sbjct: 446 IEG----SNWDPDIQIYTTILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLC 501
Query: 143 RGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLL 193
+ G A +F M +G P+ TY +I + F+ N+ E+ +L
Sbjct: 502 KQGLLAEASKLFSEMNKNGCSPNDCTYNLITRGFLRNNEALRTIELLEEML 552
>gi|410110113|gb|AFV61136.1| pentatricopeptide repeat-containing protein 123, partial [Lippia
filifolia]
Length = 439
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 98/374 (26%), Positives = 182/374 (48%), Gaps = 37/374 (9%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
LI K D++KA + S + + G+ P +V++ A++ +G+ ++ A ++ M+++G
Sbjct: 56 LIELSRKLCDYSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMKTAG 115
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
P+ +Y +L ++VE KF EA VF + + E K L D ++MI +Y + G +
Sbjct: 116 VMPNTTSYSTLLTMYVENKKFLEALSVF-SEMREIKCLL--DLTTCNIMIDVYGQLGMAK 172
Query: 222 KARKLFALMAERGVQQSTVTYNSLMSFETN---YKEVSKIYDQMQRAGLQPDVVSYALLI 278
+A KLF M + G++ + V+YN+L+ + + E ++ MQR ++ +VV+Y ++
Sbjct: 173 EADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMM 232
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCS 338
YGK E+A + +EM G+ P Y+ ++ + G +D+A +F+ +R
Sbjct: 233 MIYGKTLEHEKANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVE 292
Query: 339 PDICSYTTMLSAY-------------------------------VNASDMEGAEKFFRRL 367
D + TM+ AY A +E A FR+
Sbjct: 293 IDQILFQTMIVAYERAGLVAHAKRLLHELKRPDNIPRDTAIHILAGAGRIEEATYVFRQA 352
Query: 368 KQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDF 427
G V ++ + +I +K ++E++DKMR G P+ + +++AYGK ++F
Sbjct: 353 IDAGEVKDITVFERMIHLLSKYKKXSNVVEVFDKMRGLGYFPDSDVIAIVLNAYGKLQEF 412
Query: 428 DSAVVWYKEMESCG 441
D A Y EM+ G
Sbjct: 413 DKANDVYMEMQEVG 426
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 85/331 (25%), Positives = 158/331 (47%), Gaps = 6/331 (1%)
Query: 152 AIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMI 211
+F M+ P TY ++ F + F +A ++ +++++ P D ++ +I
Sbjct: 1 GLFDEMRRRALSPDRYTYSTLITHFGKEGLF-DAALSWLQKMEQDQVP--GDLVLYSNLI 57
Query: 212 YMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSF---ETNYKEVSKIYDQMQRAGLQ 268
+ +K Y KA +F+ + G V YN++++ ++E + +M+ AG+
Sbjct: 58 ELSRKLCDYSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMKTAGVM 117
Query: 269 PDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTV 328
P+ SY+ L+ Y + ++ EAL+VF EM + NI++D + GM +A +
Sbjct: 118 PNTTSYSTLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKL 177
Query: 329 FKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAK 388
F MR+ P++ SY T+L Y +A A FR +++ NV+TY +++ Y K
Sbjct: 178 FWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGK 237
Query: 389 VNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKA 448
EK + +M+ GI+PN ++TI+ +GK D A + ++++ S G DQ
Sbjct: 238 TLEHEKANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQIL 297
Query: 449 KNILLSLAKTADERNEANELLGNFNHPNNEP 479
++ + A A LL P+N P
Sbjct: 298 FQTMIVAYERAGLVAHAKRLLHELKRPDNIP 328
Score = 125 bits (313), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 73/303 (24%), Positives = 154/303 (50%), Gaps = 6/303 (1%)
Query: 122 MNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANK 181
M ++ +P +++ L+ +G+ G + A + ++M+ + Y +++L +
Sbjct: 6 MRRRALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDQVPGDLVLYSNLIELSRKLCD 65
Query: 182 FKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVT 241
+ +A +F L ++S PD ++ MI ++ KA + +AR L + M GV +T +
Sbjct: 66 YSKAISIFSRL---KRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMKTAGVMPNTTS 122
Query: 242 YNSLMSFETNYK---EVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEML 298
Y++L++ K E ++ +M+ D+ + ++I+ YG+ +EA +F M
Sbjct: 123 YSTLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMR 182
Query: 299 DAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDME 358
G+ P +YN LL + + + +A +F+ M+R ++ +Y +M+ Y + E
Sbjct: 183 KMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHE 242
Query: 359 GAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIM 418
A + ++ G PN ITY T+I + KV L++ ++ K+R +G++ +Q +F T++
Sbjct: 243 KANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQILFQTMI 302
Query: 419 DAY 421
AY
Sbjct: 303 VAY 305
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 85/190 (44%)
Query: 292 AVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAY 351
+F+EM + P Y+ L+ F G+ D A + + M +D+ D+ Y+ ++
Sbjct: 1 GLFDEMRRRALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDQVPGDLVLYSNLIELS 60
Query: 352 VNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQ 411
D A F RLK+ GF P+++ Y +I + K + + +M+ G+ PN
Sbjct: 61 RKLCDYSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMKTAGVMPNT 120
Query: 412 TIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGN 471
T ++T++ Y +NK F A+ + EM D NI++ + EA++L
Sbjct: 121 TSYSTLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWG 180
Query: 472 FNHPNNEPGI 481
EP +
Sbjct: 181 MRKMGIEPNV 190
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/244 (24%), Positives = 115/244 (47%), Gaps = 6/244 (2%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + + L+ YG F +A + M +K +VV++ ++M YG+ ++ A +
Sbjct: 189 NVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLI 248
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
+ MQS G P+++TY I+ ++ + K A +F L S ++ DQ +F MI Y
Sbjct: 249 QEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKL---RSSGVEIDQILFQTMIVAY 305
Query: 215 KKAGGYEKARKLFA-LMAERGVQQSTVTYNSLMSFETNYKEVSKIYDQMQRAGLQPDVVS 273
++AG A++L L + + T + +++ +E + ++ Q AG D+
Sbjct: 306 ERAGLVAHAKRLLHELKRPDNIPRDTAIH--ILAGAGRIEEATYVFRQAIDAGEVKDITV 363
Query: 274 YALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMR 333
+ +I+ K ++ + VF++M G P I+L+A+ D+A V+ M+
Sbjct: 364 FERMIHLLSKYKKXSNVVEVFDKMRGLGYFPDSDVIAIVLNAYGKLQEFDKANDVYMEMQ 423
Query: 334 RDRC 337
C
Sbjct: 424 EVGC 427
Score = 42.7 bits (99), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 25/123 (20%), Positives = 51/123 (41%)
Query: 363 FFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYG 422
F +++ P+ TY TLI + K + + KM + + + +++ +++
Sbjct: 2 LFDEMRRRALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDQVPGDLVLYSNLIELSR 61
Query: 423 KNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGIN 482
K D+ A+ + ++ GF PD A N ++++ A EA L+ P
Sbjct: 62 KLCDYSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMKTAGVMPNTT 121
Query: 483 GLS 485
S
Sbjct: 122 SYS 124
>gi|255661182|gb|ACU25760.1| pentatricopeptide repeat-containing protein [Phyla dulcis]
Length = 426
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 100/374 (26%), Positives = 180/374 (48%), Gaps = 37/374 (9%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
LI K D++KA + S + GY P +V++ A++ +G+ ++ A ++ M+++G
Sbjct: 50 LIELSRKLCDYSKAISIFSRLKNSGYTPDLVAYNAMIIVFGKAKLFREARSLISEMKTAG 109
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
P+ +Y +L ++VE KF EA VF + + E K L D ++MI +Y + G +
Sbjct: 110 VIPNTTSYSTLLTMYVENKKFLEALSVF-SEMREIKCLL--DLTTCNIMIDVYGQLGMAK 166
Query: 222 KARKLFALMAERGVQQSTVTYNSLMSFETN---YKEVSKIYDQMQRAGLQPDVVSYALLI 278
+A KLF M + G++ + V+YN+L+ + + E ++ MQR ++ +VV+Y +I
Sbjct: 167 EADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMI 226
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCS 338
YGK E+A + +EM G+ P Y+ ++ + G +D+A +F+ +R
Sbjct: 227 MIYGKTLEHEKANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVE 286
Query: 339 PDICSYTTMLSAY-------------------------------VNASDMEGAEKFFRRL 367
D + TM+ AY A +E A FR+
Sbjct: 287 IDQILFQTMIVAYERAGLVAHAKRLLHELKRPDNIPRDTAIHILAGAGRIEEATYVFRQA 346
Query: 368 KQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDF 427
G V ++ + +I +K ++E++DKMR G P+ + +++AYGK +F
Sbjct: 347 IDAGEVKDITVFERMIHLLSKYKKYANVVEVFDKMRGLGYFPDSNVIAIVLNAYGKLHEF 406
Query: 428 DSAVVWYKEMESCG 441
D A Y EM+ G
Sbjct: 407 DKANDVYMEMQEVG 420
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 84/319 (26%), Positives = 153/319 (47%), Gaps = 6/319 (1%)
Query: 164 PSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKA 223
P TY ++ F + F +A ++ +++++ P D ++ +I + +K Y KA
Sbjct: 7 PDRYTYSTLITHFGKEGLF-DAALSWLQKMEQDQVP--GDLVLYSNLIELSRKLCDYSKA 63
Query: 224 RKLFALMAERGVQQSTVTYNSLMSF---ETNYKEVSKIYDQMQRAGLQPDVVSYALLINA 280
+F+ + G V YN+++ ++E + +M+ AG+ P+ SY+ L+
Sbjct: 64 ISIFSRLKNSGYTPDLVAYNAMIIVFGKAKLFREARSLISEMKTAGVIPNTTSYSTLLTM 123
Query: 281 YGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPD 340
Y + ++ EAL+VF EM + NI++D + GM +A +F MR+ P+
Sbjct: 124 YVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPN 183
Query: 341 ICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYD 400
+ SY T+L Y +A A FR +++ NV+TY ++I Y K EK +
Sbjct: 184 VVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMIMIYGKTLEHEKANNLIQ 243
Query: 401 KMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTAD 460
+M+ GI+PN ++TI+ +GK D A + ++++ S G DQ ++ + A
Sbjct: 244 EMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQILFQTMIVAYERAG 303
Query: 461 ERNEANELLGNFNHPNNEP 479
A LL P+N P
Sbjct: 304 LVAHAKRLLHELKRPDNIP 322
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 72/301 (23%), Positives = 152/301 (50%), Gaps = 6/301 (1%)
Query: 124 KKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFK 183
++ +P +++ L+ +G+ G + A + ++M+ + Y +++L + +
Sbjct: 2 QRALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDQVPGDLVLYSNLIELSRKLCDYS 61
Query: 184 EAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYN 243
+A +F L + S PD ++ MI ++ KA + +AR L + M GV +T +Y+
Sbjct: 62 KAISIFSRL---KNSGYTPDLVAYNAMIIVFGKAKLFREARSLISEMKTAGVIPNTTSYS 118
Query: 244 SLMSFETNYK---EVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDA 300
+L++ K E ++ +M+ D+ + ++I+ YG+ +EA +F M
Sbjct: 119 TLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKM 178
Query: 301 GVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGA 360
G+ P +YN LL + + + +A +F+ M+R ++ +Y +M+ Y + E A
Sbjct: 179 GIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMIMIYGKTLEHEKA 238
Query: 361 EKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDA 420
+ ++ G PN ITY T+I + KV L++ ++ K+R +G++ +Q +F T++ A
Sbjct: 239 NNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQILFQTMIVA 298
Query: 421 Y 421
Y
Sbjct: 299 Y 299
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/244 (23%), Positives = 115/244 (47%), Gaps = 6/244 (2%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + + L+ YG F +A + M +K +VV++ +++ YG+ ++ A +
Sbjct: 183 NVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMIMIYGKTLEHEKANNLI 242
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
+ MQS G P+++TY I+ ++ + K A +F L S ++ DQ +F MI Y
Sbjct: 243 QEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKL---RSSGVEIDQILFQTMIVAY 299
Query: 215 KKAGGYEKARKLFA-LMAERGVQQSTVTYNSLMSFETNYKEVSKIYDQMQRAGLQPDVVS 273
++AG A++L L + + T + +++ +E + ++ Q AG D+
Sbjct: 300 ERAGLVAHAKRLLHELKRPDNIPRDTAIH--ILAGAGRIEEATYVFRQAIDAGEVKDITV 357
Query: 274 YALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMR 333
+ +I+ K ++ + VF++M G P I+L+A+ D+A V+ M+
Sbjct: 358 FERMIHLLSKYKKYANVVEVFDKMRGLGYFPDSNVIAIVLNAYGKLHEFDKANDVYMEMQ 417
Query: 334 RDRC 337
C
Sbjct: 418 EVGC 421
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/181 (23%), Positives = 79/181 (43%)
Query: 301 GVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGA 360
+ P Y+ L+ F G+ D A + + M +D+ D+ Y+ ++ D A
Sbjct: 4 ALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDQVPGDLVLYSNLIELSRKLCDYSKA 63
Query: 361 EKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDA 420
F RLK G+ P+++ Y +I + K + + +M+ G+ PN T ++T++
Sbjct: 64 ISIFSRLKNSGYTPDLVAYNAMIIVFGKAKLFREARSLISEMKTAGVIPNTTSYSTLLTM 123
Query: 421 YGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPG 480
Y +NK F A+ + EM D NI++ + EA++L EP
Sbjct: 124 YVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPN 183
Query: 481 I 481
+
Sbjct: 184 V 184
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/123 (22%), Positives = 65/123 (52%)
Query: 333 RRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNL 392
R+ SPD +Y+T+++ + + A + ++++QD +++ Y LI+ K+ +
Sbjct: 1 RQRALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDQVPGDLVLYSNLIELSRKLCDY 60
Query: 393 EKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNIL 452
K + I+ +++ +G P+ + ++ +GK K F A EM++ G P+ + + L
Sbjct: 61 SKAISIFSRLKNSGYTPDLVAYNAMIIVFGKAKLFREARSLISEMKTAGVIPNTTSYSTL 120
Query: 453 LSL 455
L++
Sbjct: 121 LTM 123
Score = 40.0 bits (92), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 24/118 (20%), Positives = 49/118 (41%)
Query: 368 KQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDF 427
+Q P+ TY TLI + K + + KM + + + +++ +++ K D+
Sbjct: 1 RQRALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDQVPGDLVLYSNLIELSRKLCDY 60
Query: 428 DSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGINGLS 485
A+ + +++ G+ PD A N ++ + A EA L+ P S
Sbjct: 61 SKAISIFSRLKNSGYTPDLVAYNAMIIVFGKAKLFREARSLISEMKTAGVIPNTTSYS 118
>gi|302773712|ref|XP_002970273.1| hypothetical protein SELMODRAFT_411148 [Selaginella moellendorffii]
gi|300161789|gb|EFJ28403.1| hypothetical protein SELMODRAFT_411148 [Selaginella moellendorffii]
Length = 831
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 96/358 (26%), Positives = 167/358 (46%), Gaps = 8/358 (2%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRM--QS 159
+I K G + A +L M K+GY P + +H+ L+ + + + A+ + M +
Sbjct: 380 VIQELCKAGRVDSALSLLETMIKRGYCPDMATHSMLINELCKADKIQEAQEFLQGMDRKI 439
Query: 160 SGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGG 219
S S +Y +L +A K +A +F T++ E PD + ++I + K
Sbjct: 440 SSRSSSCFSYNSLLNSLCKAKKVHQAFAIFSTMVSERS--FVPDVVSYSILIDGFCKIDE 497
Query: 220 YEKARKLFALMAERGVQQSTVTYNSLMS---FETNYKEVSKIYDQMQRAGLQPDVVSYAL 276
+A KL+ M + + TYN+ ++ + + +Y++M AG PDV++Y+
Sbjct: 498 LGRAEKLYKQMIDLNCVPNVTTYNAFLNGLMRKGRIADAQGVYEEMVAAGCSPDVITYST 557
Query: 277 LINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDR 336
LI+ + AR+ ++A +FE M+ G RP YN LL D+A +F+ M
Sbjct: 558 LIHGFSLARKHDQAHELFETMISRGCRPNAVTYNCLLHGLCKESKPDEAHELFRKMVERG 617
Query: 337 CSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMM 396
C PD +YTT+L + N +E A + F + G P+V+ Y L+KG+ + +
Sbjct: 618 CDPDRVTYTTLLYGFCNVGKIEQAVEVFDEMVSKGHDPDVVAYNCLLKGFFRAGKPGEAK 677
Query: 397 EIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMES-CGFPPDQKAKNILL 453
+++ M KP+ ++D K K D AV ++ ME G PD N L+
Sbjct: 678 QLFQVMVSRQCKPDTVSHNIMIDGLSKAKRLDDAVEVFERMEQDHGCSPDLVTYNSLI 735
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 102/406 (25%), Positives = 189/406 (46%), Gaps = 9/406 (2%)
Query: 70 LKQLKKWNVVSEVLEWLR-IQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYA 128
L L K + + E R +Q ++ + MLI + G +KAE+ + +
Sbjct: 312 LSGLCKSGKIEQAFEACRTMQESLSSSQPVYDMLIRLLIESGRIDKAEEACLEIAGRNIQ 371
Query: 129 PSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEV 188
PS + ++++ + GR +A ++ M G P T+ +++ +A+K +EA+E
Sbjct: 372 PSSGTCHSVIQELCKAGRVDSALSLLETMIKRGYCPDMATHSMLINELCKADKIQEAQE- 430
Query: 189 FMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALM-AERGVQQSTVTYNSLMS 247
F+ +D + S ++ ++ KA +A +F+ M +ER V+Y+ L+
Sbjct: 431 FLQGMDRKISSRSSSCFSYNSLLNSLCKAKKVHQAFAIFSTMVSERSFVPDVVSYSILID 490
Query: 248 FETNYKEVS---KIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRP 304
E+ K+Y QM P+V +Y +N + R +A V+EEM+ AG P
Sbjct: 491 GFCKIDELGRAEKLYKQMIDLNCVPNVTTYNAFLNGLMRKGRIADAQGVYEEMVAAGCSP 550
Query: 305 THKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFF 364
Y+ L+ F+++ DQA +F+ M C P+ +Y +L S + A + F
Sbjct: 551 DVITYSTLIHGFSLARKHDQAHELFETMISRGCRPNAVTYNCLLHGLCKESKPDEAHELF 610
Query: 365 RRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKN 424
R++ + G P+ +TY TL+ G+ V +E+ +E++D+M G P+ + ++ + +
Sbjct: 611 RKMVERGCDPDRVTYTTLLYGFCNVGKIEQAVEVFDEMVSKGHDPDVVAYNCLLKGFFRA 670
Query: 425 KDFDSAVVWYKEMESCGFPPDQKAKNIL---LSLAKTADERNEANE 467
A ++ M S PD + NI+ LS AK D+ E E
Sbjct: 671 GKPGEAKQLFQVMVSRQCKPDTVSHNIMIDGLSKAKRLDDAVEVFE 716
Score = 130 bits (326), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 106/430 (24%), Positives = 183/430 (42%), Gaps = 46/430 (10%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAP-SVVSHTALMEAYGRGGRYKNAEAIFRRMQSS 160
++ A+ K + ++A K+ M + AP + V+ TA + + G+ + A R MQ S
Sbjct: 275 MVLAHCKLENLDEAFKLFLEMAVESKAPLNNVAWTAFLSGLCKSGKIEQAFEACRTMQES 334
Query: 161 GPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGY 220
S Y ++++L +E+ + +AEE + + ++P H +I KAG
Sbjct: 335 -LSSSQPVYDMLIRLLIESGRIDKAEEACLEIAGRN---IQPSSGTCHSVIQELCKAGRV 390
Query: 221 EKARKLFALMAERGVQQSTVT-------------------------------------YN 243
+ A L M +RG T YN
Sbjct: 391 DSALSLLETMIKRGYCPDMATHSMLINELCKADKIQEAQEFLQGMDRKISSRSSSCFSYN 450
Query: 244 SLMSFETNYKEVSK---IYDQM-QRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLD 299
SL++ K+V + I+ M PDVVSY++LI+ + K A ++++M+D
Sbjct: 451 SLLNSLCKAKKVHQAFAIFSTMVSERSFVPDVVSYSILIDGFCKIDELGRAEKLYKQMID 510
Query: 300 AGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEG 359
P YN L+ G + A+ V++ M CSPD+ +Y+T++ + A +
Sbjct: 511 LNCVPNVTTYNAFLNGLMRKGRIADAQGVYEEMVAAGCSPDVITYSTLIHGFSLARKHDQ 570
Query: 360 AEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMD 419
A + F + G PN +TY L+ G K + ++ E++ KM G P++ +TT++
Sbjct: 571 AHELFETMISRGCRPNAVTYNCLLHGLCKESKPDEAHELFRKMVERGCDPDRVTYTTLLY 630
Query: 420 AYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEP 479
+ + AV + EM S G PD A N LL A + EA +L +P
Sbjct: 631 GFCNVGKIEQAVEVFDEMVSKGHDPDVVAYNCLLKGFFRAGKPGEAKQLFQVMVSRQCKP 690
Query: 480 GINGLSISVD 489
+I +D
Sbjct: 691 DTVSHNIMID 700
Score = 128 bits (321), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 74/293 (25%), Positives = 147/293 (50%), Gaps = 7/293 (2%)
Query: 97 MDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRR 156
+ + +LI + K + +AEK+ M P+V ++ A + R GR +A+ ++
Sbjct: 483 VSYSILIDGFCKIDELGRAEKLYKQMIDLNCVPNVTTYNAFLNGLMRKGRIADAQGVYEE 542
Query: 157 MQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKK 216
M ++G P +TY ++ F A K +A E+F T++ +P+ ++ +++ K
Sbjct: 543 MVAAGCSPDVITYSTLIHGFSLARKHDQAHELFETMISR---GCRPNAVTYNCLLHGLCK 599
Query: 217 AGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSK---IYDQMQRAGLQPDVVS 273
++A +LF M ERG VTY +L+ N ++ + ++D+M G PDVV+
Sbjct: 600 ESKPDEAHELFRKMVERGCDPDRVTYTTLLYGFCNVGKIEQAVEVFDEMVSKGHDPDVVA 659
Query: 274 YALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMR 333
Y L+ + +A + EA +F+ M+ +P ++NI++D + + +D A VF+ M
Sbjct: 660 YNCLLKGFFRAGKPGEAKQLFQVMVSRQCKPDTVSHNIMIDGLSKAKRLDDAVEVFERME 719
Query: 334 RDR-CSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKG 385
+D CSPD+ +Y +++ + A K F+ + + P+ + L++
Sbjct: 720 QDHGCSPDLVTYNSLIFGLCGEQRLSEAMKVFKEIDRLKLSPDPHAFNVLLEA 772
Score = 111 bits (278), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 94/407 (23%), Positives = 178/407 (43%), Gaps = 43/407 (10%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
+ A GK+G+F++ V +K A ++ AL+ + + A +FR M SG
Sbjct: 208 CLKATGKEGEFSR---VFGRDLEKRVAVEMMLKKALLVNFVIQDKAIEASKLFRAMVKSG 264
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSP---------------------- 199
+P A Y ++ + EA ++F+ + E K+P
Sbjct: 265 CKPDATIYSYMVLAHCKLENLDEAFKLFLEMAVESKAPLNNVAWTAFLSGLCKSGKIEQA 324
Query: 200 ----------LKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFE 249
L Q ++ M+I + ++G +KA + +A R +Q S+ T +S++
Sbjct: 325 FEACRTMQESLSSSQPVYDMLIRLLIESGRIDKAEEACLEIAGRNIQPSSGTCHSVIQEL 384
Query: 250 TNYKEVS---KIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGV---R 303
V + + M + G PD+ ++++LIN KA + +EA + M D +
Sbjct: 385 CKAGRVDSALSLLETMIKRGYCPDMATHSMLINELCKADKIQEAQEFLQGM-DRKISSRS 443
Query: 304 PTHKAYNILLDAFAISGMVDQARTVFKCMRRDRC-SPDICSYTTMLSAYVNASDMEGAEK 362
+ +YN LL++ + V QA +F M +R PD+ SY+ ++ + ++ AEK
Sbjct: 444 SSCFSYNSLLNSLCKAKKVHQAFAIFSTMVSERSFVPDVVSYSILIDGFCKIDELGRAEK 503
Query: 363 FFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYG 422
++++ VPNV TY + G + + +Y++M G P+ ++T++ +
Sbjct: 504 LYKQMIDLNCVPNVTTYNAFLNGLMRKGRIADAQGVYEEMVAAGCSPDVITYSTLIHGFS 563
Query: 423 KNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELL 469
+ D A ++ M S G P+ N LL + +EA+EL
Sbjct: 564 LARKHDQAHELFETMISRGCRPNAVTYNCLLHGLCKESKPDEAHELF 610
Score = 91.7 bits (226), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 62/238 (26%), Positives = 118/238 (49%), Gaps = 8/238 (3%)
Query: 97 MDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRR 156
+ + LI + ++A ++ M +G P+ V++ L+ + + A +FR+
Sbjct: 553 ITYSTLIHGFSLARKHDQAHELFETMISRGCRPNAVTYNCLLHGLCKESKPDEAHELFRK 612
Query: 157 MQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKK 216
M G P +TY +L F K ++A EVF ++ + P D ++ ++ + +
Sbjct: 613 MVERGCDPDRVTYTTLLYGFCNVGKIEQAVEVFDEMVSKGHDP---DVVAYNCLLKGFFR 669
Query: 217 AGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVS---KIYDQM-QRAGLQPDVV 272
AG +A++LF +M R + TV++N ++ + K + +++++M Q G PD+V
Sbjct: 670 AGKPGEAKQLFQVMVSRQCKPDTVSHNIMIDGLSKAKRLDDAVEVFERMEQDHGCSPDLV 729
Query: 273 SYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFK 330
+Y LI +R EA+ VF+E+ + P A+N+LL+A G+V Q FK
Sbjct: 730 TYNSLIFGLCGEQRLSEAMKVFKEIDRLKLSPDPHAFNVLLEAIK-CGIVYQFEIRFK 786
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 59/274 (21%), Positives = 118/274 (43%), Gaps = 6/274 (2%)
Query: 222 KARKLFALMAERGVQQSTVTYNSLMS---FETNYKEVSKIYDQMQRAGLQPDVVSYALLI 278
+A F + R + TYN L+ + K+ +++++M G+ P+ +YA+L+
Sbjct: 112 EALTFFRWLQARNFKHDVFTYNCLLDKLIRHRDLKQAGQVFEKMVAQGVVPNGFTYAVLV 171
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCS 338
+ R +EA+ F EM+D G +P+ Y + + +G + VF R +
Sbjct: 172 QSSCYERNSDEAVRFFGEMVDKGFKPSSTLYQKVTECLKATGKEGEFSRVFGRDLEKRVA 231
Query: 339 PDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEI 398
++ +L +V A K FR + + G P+ Y ++ + K+ NL++ ++
Sbjct: 232 VEMMLKKALLVNFVIQDKAIEASKLFRAMVKSGCKPDATIYSYMVLAHCKLENLDEAFKL 291
Query: 399 YDKMRVNGIKP-NQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAK 457
+ +M V P N +T + K+ + A + M+ Q ++L+ L
Sbjct: 292 FLEMAVESKAPLNNVAWTAFLSGLCKSGKIEQAFEACRTMQE-SLSSSQPVYDMLIRLLI 350
Query: 458 TADERNEANELLGNFNHPNNEPGINGLSISVDEE 491
+ ++A E N +P +G SV +E
Sbjct: 351 ESGRIDKAEEACLEIAGRNIQPS-SGTCHSVIQE 383
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 49/216 (22%), Positives = 89/216 (41%), Gaps = 42/216 (19%)
Query: 70 LKQLKKWNVVSEVLEWLR--IQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGY 127
L L K + E E R ++ D + + + L+ + G +A +V M KG+
Sbjct: 594 LHGLCKESKPDEAHELFRKMVERGCDPDRVTYTTLLYGFCNVGKIEQAVEVFDEMVSKGH 653
Query: 128 APSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEE 187
P VV++ L++ + R G+ A+ +F+ M S +P +++ I++ +A + +A E
Sbjct: 654 DPDVVAYNCLLKGFFRAGKPGEAKQLFQVMVSRQCKPDTVSHNIMIDGLSKAKRLDDAVE 713
Query: 188 VFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSL-- 245
VF + E+ PD VTYNSL
Sbjct: 714 VFERM--EQDHGCSPD-----------------------------------LVTYNSLIF 736
Query: 246 -MSFETNYKEVSKIYDQMQRAGLQPDVVSYALLINA 280
+ E E K++ ++ R L PD ++ +L+ A
Sbjct: 737 GLCGEQRLSEAMKVFKEIDRLKLSPDPHAFNVLLEA 772
>gi|255661164|gb|ACU25751.1| pentatricopeptide repeat-containing protein [Glandularia subincana]
Length = 426
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 96/374 (25%), Positives = 182/374 (48%), Gaps = 37/374 (9%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
LI K D++KA + S + + G+ P +V++ A++ +G+ ++ A ++ M+++G
Sbjct: 50 LIELSRKLCDYSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMRTAG 109
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
P+ +Y +L ++VE KF EA F + E K L D ++MI +Y + G +
Sbjct: 110 VTPNTASYSTLLTMYVENKKFLEALSXFAEM-REIKCLL--DLTTCNIMIDVYGQLGMAK 166
Query: 222 KARKLFALMAERGVQQSTVTYNSLMSFETN---YKEVSKIYDQMQRAGLQPDVVSYALLI 278
+A KLF M + G++ + V+YN+L+ + + E ++ MQR ++ +VV+Y ++
Sbjct: 167 EADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMM 226
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCS 338
YGK E+A + +EM + G+ P Y+ ++ + G +D+A +F+ +R
Sbjct: 227 MIYGKTLEHEKANNLIQEMQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVD 286
Query: 339 PDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVP------------------------ 374
D Y TM+ AY A + A++ LK+ +P
Sbjct: 287 IDQVLYQTMIVAYERAGLVAHAKRLLHELKRPDNIPRDIAIHILAGAGRIEEATWVFRQA 346
Query: 375 -------NVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDF 427
++ + +I ++K ++E++DKMR G P+ + +++AYGK +F
Sbjct: 347 IDAGEVKDITVFERMIHLFSKYKKYGNVVEVFDKMRGLGYFPDSNVIALVLNAYGKLHEF 406
Query: 428 DSAVVWYKEMESCG 441
D A Y EM+ G
Sbjct: 407 DKANDVYMEMQEVG 420
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 84/318 (26%), Positives = 145/318 (45%), Gaps = 38/318 (11%)
Query: 200 LKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFE---TNYKEVS 256
L PD+ + +I + K G ++ A M + V V Y++L+ +Y +
Sbjct: 5 LSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDYSKAI 64
Query: 257 KIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAF 316
I+ +++R+G PD+V+Y +IN +GKA+ EA ++ EM AGV P +Y+ LL +
Sbjct: 65 SIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVTPNTASYSTLLTMY 124
Query: 317 AISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNV 376
+ +A + F MR +C D+ + M+ Y + A+K F +++ G PNV
Sbjct: 125 VENKKFLEALSXFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNV 184
Query: 377 ITYGTLIKGYA---------------KVNNLEK-------MMEIYDK------------- 401
++Y TL++ Y + N+E+ MM IY K
Sbjct: 185 VSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLIQE 244
Query: 402 MRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADE 461
M+ GI+PN ++TI+ +GK D A + ++++ S G DQ ++ + A
Sbjct: 245 MQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVDIDQVLYQTMIVAYERAGL 304
Query: 462 RNEANELLGNFNHPNNEP 479
A LL P+N P
Sbjct: 305 VAHAKRLLHELKRPDNIP 322
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 45/181 (24%), Positives = 79/181 (43%)
Query: 301 GVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGA 360
+ P Y+ L+ F G+ D A + + M +DR D+ Y+ ++ D A
Sbjct: 4 ALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDYSKA 63
Query: 361 EKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDA 420
F RLK+ GF P+++ Y +I + K + + +MR G+ PN ++T++
Sbjct: 64 ISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVTPNTASYSTLLTM 123
Query: 421 YGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPG 480
Y +NK F A+ + EM D NI++ + EA++L EP
Sbjct: 124 YVENKKFLEALSXFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPN 183
Query: 481 I 481
+
Sbjct: 184 V 184
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/244 (22%), Positives = 114/244 (46%), Gaps = 6/244 (2%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + + L+ YG F +A + M +K +VV++ ++M YG+ ++ A +
Sbjct: 183 NVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLI 242
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
+ MQ+ G P+++TY I+ ++ + K A +F L S + DQ ++ MI Y
Sbjct: 243 QEMQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKL---RSSGVDIDQVLYQTMIVAY 299
Query: 215 KKAGGYEKARKLFA-LMAERGVQQSTVTYNSLMSFETNYKEVSKIYDQMQRAGLQPDVVS 273
++AG A++L L + + + +++ +E + ++ Q AG D+
Sbjct: 300 ERAGLVAHAKRLLHELKRPDNIPRDIAIH--ILAGAGRIEEATWVFRQAIDAGEVKDITV 357
Query: 274 YALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMR 333
+ +I+ + K ++ + VF++M G P ++L+A+ D+A V+ M+
Sbjct: 358 FERMIHLFSKYKKYGNVVEVFDKMRGLGYFPDSNVIALVLNAYGKLHEFDKANDVYMEMQ 417
Query: 334 RDRC 337
C
Sbjct: 418 EVGC 421
Score = 58.5 bits (140), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 28/123 (22%), Positives = 64/123 (52%)
Query: 333 RRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNL 392
R SPD +Y+T+++ + + A + ++++QD +++ Y LI+ K+ +
Sbjct: 1 RERALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDY 60
Query: 393 EKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNIL 452
K + I+ +++ +G P+ + +++ +GK K F A EM + G P+ + + L
Sbjct: 61 SKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVTPNTASYSTL 120
Query: 453 LSL 455
L++
Sbjct: 121 LTM 123
>gi|357438845|ref|XP_003589699.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355478747|gb|AES59950.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 806
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 108/416 (25%), Positives = 201/416 (48%), Gaps = 13/416 (3%)
Query: 33 RLMNQIEEVGSAVAVLRSERTRGQPLPKDLVLGTLV-RLKQLKKWNVVSEVLEWLRIQSW 91
+++ Q ++ S++ +S G L T++ +L + + + VS +L+ +++++
Sbjct: 46 KVLRQEHDIVSSLEYFKSLSNSGTFKHTHLTYETMIDKLGRNNEMDGVSYLLQQMKLENV 105
Query: 92 WDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAE 151
E+ F +I Y + + K+ + + G PSV + +++A +K
Sbjct: 106 PCSQEL-FQFVIKCYRRSNLGEQGLKMFYRIREFGCEPSVKIYNLVLDALLSQNLFKMIN 164
Query: 152 AIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMI 211
A++ M+S G P+ TY ++LK + K A ++ L++ PD + +I
Sbjct: 165 ALYNNMKSEGLEPNVFTYNVLLKALCQNGKVDGACKL---LVEMSNKGCDPDDVSYTTVI 221
Query: 212 YMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLM---SFETNYKEVSKIYDQMQRAGLQ 268
K G +KAR+L A+ E V YN+L+ E +KE + ++M G+
Sbjct: 222 SSMCKLGDVDKAREL-AMKFEPVVP----VYNALIHGVCKECRFKEAFDLMNEMVDRGVD 276
Query: 269 PDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTV 328
P+V+SY+ +I+ E +LAVF M G RP + + L+ F + G V A +
Sbjct: 277 PNVISYSTVISCLSDMGNVELSLAVFGRMFVRGCRPNVQTFTSLIKGFFVRGRVGDAVGL 336
Query: 329 FKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAK 388
+ M R+ SP++ +Y T++ + +M+ A + ++++D PNV TY T+I G+AK
Sbjct: 337 WNLMIREGVSPNVVAYNTLIHGLCSDGNMDEAISVWNQMEKDSIRPNVTTYSTIIYGFAK 396
Query: 389 VNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPP 444
+L E ++KM G +PN ++T ++D + FD A M S G PP
Sbjct: 397 SGDLVSACETWNKMINCGCRPNVVVYTCMVDVLCQMSMFDQAFDLIDNMISDGCPP 452
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 80/345 (23%), Positives = 164/345 (47%), Gaps = 5/345 (1%)
Query: 137 LMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEE 196
+++ Y R + +F R++ G PS Y ++L + N FK ++ + E
Sbjct: 115 VIKCYRRSNLGEQGLKMFYRIREFGCEPSVKIYNLVLDALLSQNLFKMINALYNNMKSE- 173
Query: 197 KSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVS 256
L+P+ +++++ + G + A KL M+ +G V+Y +++S +V
Sbjct: 174 --GLEPNVFTYNVLLKALCQNGKVDGACKLLVEMSNKGCDPDDVSYTTVISSMCKLGDVD 231
Query: 257 KIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAF 316
K + + +P V Y LI+ K R +EA + EM+D GV P +Y+ ++
Sbjct: 232 KARELAMK--FEPVVPVYNALIHGVCKECRFKEAFDLMNEMVDRGVDPNVISYSTVISCL 289
Query: 317 AISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNV 376
+ G V+ + VF M C P++ ++T+++ + + A + + ++G PNV
Sbjct: 290 SDMGNVELSLAVFGRMFVRGCRPNVQTFTSLIKGFFVRGRVGDAVGLWNLMIREGVSPNV 349
Query: 377 ITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKE 436
+ Y TLI G N+++ + ++++M + I+PN T ++TI+ + K+ D SA + +
Sbjct: 350 VAYNTLIHGLCSDGNMDEAISVWNQMEKDSIRPNVTTYSTIIYGFAKSGDLVSACETWNK 409
Query: 437 MESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGI 481
M +CG P+ ++ + ++A +L+ N P +
Sbjct: 410 MINCGCRPNVVVYTCMVDVLCQMSMFDQAFDLIDNMISDGCPPTV 454
Score = 116 bits (290), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 84/347 (24%), Positives = 153/347 (44%), Gaps = 11/347 (3%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + +L+ A + G + A K+L M+ KG P VS+T ++ + + G A +
Sbjct: 178 NVFTYNVLLKALCQNGKVDGACKLLVEMSNKGCDPDDVSYTTVISSMCKLGDVDKARELA 237
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
+ + P +AL + + + +FKEA ++ ++D + P+ + +I
Sbjct: 238 MKFEPVVPVYNALIHGV-----CKECRFKEAFDLMNEMVDR---GVDPNVISYSTVISCL 289
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSLMS---FETNYKEVSKIYDQMQRAGLQPDV 271
G E + +F M RG + + T+ SL+ + +++ M R G+ P+V
Sbjct: 290 SDMGNVELSLAVFGRMFVRGCRPNVQTFTSLIKGFFVRGRVGDAVGLWNLMIREGVSPNV 349
Query: 272 VSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKC 331
V+Y LI+ +EA++V+ +M +RP Y+ ++ FA SG + A +
Sbjct: 350 VAYNTLIHGLCSDGNMDEAISVWNQMEKDSIRPNVTTYSTIIYGFAKSGDLVSACETWNK 409
Query: 332 MRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNN 391
M C P++ YT M+ S + A + DG P VIT+ IKG +
Sbjct: 410 MINCGCRPNVVVYTCMVDVLCQMSMFDQAFDLIDNMISDGCPPTVITFNNFIKGLCRAGR 469
Query: 392 LEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEME 438
+E M + D+M PN + ++D + F A +E+E
Sbjct: 470 VEWAMNVLDQMEKYECLPNIRTYNELLDGLFRANAFREACGLIRELE 516
Score = 113 bits (283), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 76/333 (22%), Positives = 162/333 (48%), Gaps = 6/333 (1%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
LI K+ F +A +++ M +G P+V+S++ ++ G + + A+F RM G
Sbjct: 250 LIHGVCKECRFKEAFDLMNEMVDRGVDPNVISYSTVISCLSDMGNVELSLAVFGRMFVRG 309
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
RP+ T+ ++K F + +A ++ ++ E SP + ++ +I+ G +
Sbjct: 310 CRPNVQTFTSLIKGFFVRGRVGDAVGLWNLMIREGVSP---NVVAYNTLIHGLCSDGNMD 366
Query: 222 KARKLFALMAERGVQQSTVTYNSLM-SFETNYKEVS--KIYDQMQRAGLQPDVVSYALLI 278
+A ++ M + ++ + TY++++ F + VS + +++M G +P+VV Y ++
Sbjct: 367 EAISVWNQMEKDSIRPNVTTYSTIIYGFAKSGDLVSACETWNKMINCGCRPNVVVYTCMV 426
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCS 338
+ + ++A + + M+ G PT +N + +G V+ A V M + C
Sbjct: 427 DVLCQMSMFDQAFDLIDNMISDGCPPTVITFNNFIKGLCRAGRVEWAMNVLDQMEKYECL 486
Query: 339 PDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEI 398
P+I +Y +L A+ A R L++ + +TY T++ G++ ++++++
Sbjct: 487 PNIRTYNELLDGLFRANAFREACGLIRELEERKVEFDCVTYNTIMYGFSFNGMHQQVLQL 546
Query: 399 YDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAV 431
KM VNGIK + T ++AY K +A+
Sbjct: 547 LGKMLVNGIKLDTITVNTTVNAYCKLGKVKTAI 579
Score = 99.0 bits (245), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 72/305 (23%), Positives = 142/305 (46%), Gaps = 14/305 (4%)
Query: 154 FRRMQSSGP-RPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIY 212
F+ + +SG + + LTY+ ++ N+ + + + E P Q++F +I
Sbjct: 61 FKSLSNSGTFKHTHLTYETMIDKLGRNNEM-DGVSYLLQQMKLENVPC--SQELFQFVIK 117
Query: 213 MYKKAGGYEKARKLFALMAERGVQQSTVTYN----SLMSFETNYKEVSKIYDQMQRAGLQ 268
Y+++ E+ K+F + E G + S YN +L+S + +K ++ +Y+ M+ GL+
Sbjct: 118 CYRRSNLGEQGLKMFYRIREFGCEPSVKIYNLVLDALLS-QNLFKMINALYNNMKSEGLE 176
Query: 269 PDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTV 328
P+V +Y +L+ A + + + A + EM + G P +Y ++ + G VD+AR +
Sbjct: 177 PNVFTYNVLLKALCQNGKVDGACKLLVEMSNKGCDPDDVSYTTVISSMCKLGDVDKAREL 236
Query: 329 FKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAK 388
+ P + Y ++ + A + G PNVI+Y T+I +
Sbjct: 237 AM-----KFEPVVPVYNALIHGVCKECRFKEAFDLMNEMVDRGVDPNVISYSTVISCLSD 291
Query: 389 VNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKA 448
+ N+E + ++ +M V G +PN FT+++ + AV + M G P+ A
Sbjct: 292 MGNVELSLAVFGRMFVRGCRPNVQTFTSLIKGFFVRGRVGDAVGLWNLMIREGVSPNVVA 351
Query: 449 KNILL 453
N L+
Sbjct: 352 YNTLI 356
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 66/331 (19%), Positives = 142/331 (42%), Gaps = 7/331 (2%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N F LI + +G A + + M ++G +P+VV++ L+ G A +++
Sbjct: 313 NVQTFTSLIKGFFVRGRVGDAVGLWNLMIREGVSPNVVAYNTLIHGLCSDGNMDEAISVW 372
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
+M+ RP+ TY I+ F ++ A E + +++ +P+ ++ M+ +
Sbjct: 373 NQMEKDSIRPNVTTYSTIIYGFAKSGDLVSACETWNKMIN---CGCRPNVVVYTCMVDVL 429
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVS---KIYDQMQRAGLQPDV 271
+ +++A L M G + +T+N+ + V + DQM++ P++
Sbjct: 430 CQMSMFDQAFDLIDNMISDGCPPTVITFNNFIKGLCRAGRVEWAMNVLDQMEKYECLPNI 489
Query: 272 VSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKC 331
+Y L++ +A EA + E+ + V YN ++ F+ +GM Q +
Sbjct: 490 RTYNELLDGLFRANAFREACGLIRELEERKVEFDCVTYNTIMYGFSFNGMHQQVLQLLGK 549
Query: 332 MRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDG-FVPNVITYGTLIKGYAKVN 390
M + D + T ++AY ++ A K + + F ++IT+ ++ G
Sbjct: 550 MLVNGIKLDTITVNTTVNAYCKLGKVKTAIKVLDNISAEKEFRADIITHTIILWGICNWL 609
Query: 391 NLEKMMEIYDKMRVNGIKPNQTIFTTIMDAY 421
E+ + +M GI PN + ++ +
Sbjct: 610 GTEEAVVYLHEMLKRGIFPNIATWNVLVRGF 640
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/197 (21%), Positives = 89/197 (45%), Gaps = 9/197 (4%)
Query: 283 KARREEE----ALAVFEEMLDAGV-RPTHKAYNILLDAFAISGMVDQARTVFKCMRRDR- 336
K R+E +L F+ + ++G + TH Y ++D + +D + + M+ +
Sbjct: 46 KVLRQEHDIVSSLEYFKSLSNSGTFKHTHLTYETMIDKLGRNNEMDGVSYLLQQMKLENV 105
Query: 337 -CSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKM 395
CS ++ + ++ Y ++ E K F R+++ G P+V Y ++ N + +
Sbjct: 106 PCSQEL--FQFVIKCYRRSNLGEQGLKMFYRIREFGCEPSVKIYNLVLDALLSQNLFKMI 163
Query: 396 MEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSL 455
+Y+ M+ G++PN + ++ A +N D A EM + G PD + ++S
Sbjct: 164 NALYNNMKSEGLEPNVFTYNVLLKALCQNGKVDGACKLLVEMSNKGCDPDDVSYTTVISS 223
Query: 456 AKTADERNEANELLGNF 472
+ ++A EL F
Sbjct: 224 MCKLGDVDKARELAMKF 240
>gi|410110141|gb|AFV61150.1| pentatricopeptide repeat-containing protein 123, partial [Lippia
turbinata]
Length = 441
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 102/388 (26%), Positives = 186/388 (47%), Gaps = 37/388 (9%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
LI K D++KA + S + G+ P +V++ A++ +G+ ++ A ++ M+++G
Sbjct: 57 LIELSRKLCDYSKAISIFSRLKXSGFXPDLVAYNAMINVFGKAKLFREARSLISEMKTAG 116
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
P+ +Y +L ++VE KF EA VF + + E K L D ++MI +Y + G +
Sbjct: 117 VMPNTTSYSTLLTMYVENKKFLEALSVF-SEMREIKCLL--DLTTCNIMIDVYGQLGMAK 173
Query: 222 KARKLFALMAERGVQQSTVTYNSLMSFETN---YKEVSKIYDQMQRAGLQPDVVSYALLI 278
+A KLF M + G++ + V+YN+L+ + + E ++ MQR ++ +VV+Y ++
Sbjct: 174 EADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMM 233
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCS 338
YGK E+A + +EM GV P Y+ ++ + G +D+A +F+ +R
Sbjct: 234 MIYGKTLEHEKANNLIQEMQSRGVEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVE 293
Query: 339 PDICSYTTMLSAY-------------------------------VNASDMEGAEKFFRRL 367
D + TM+ AY A +E A FR+
Sbjct: 294 IDQILFQTMIVAYERAGLVAHAKRLLHELKRPDNIPRDTAIHILAGAGRIEEATYVFRQA 353
Query: 368 KQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDF 427
G V ++ + +I +K ++E++DKMR G P+ + +++AYGK ++F
Sbjct: 354 IDAGEVKDITVFERMIHLLSKYKKYSNVIEVFDKMRGLGYFPDSDVIAIVLNAYGKLQEF 413
Query: 428 DSAVVWYKEMESCGFPPDQKAKNILLSL 455
D A Y EM+ G + +LSL
Sbjct: 414 DKANDVYMEMQEVGCVFSDQVHFQMLSL 441
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 84/332 (25%), Positives = 158/332 (47%), Gaps = 6/332 (1%)
Query: 151 EAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMM 210
+F M+ P TY ++ F + F +A ++ +++++ P D ++ +
Sbjct: 1 HGLFDEMRQRALSPDRYTYSTLITHFGKEGLF-DAALSWLQKMEQDQVP--GDLVLYSNL 57
Query: 211 IYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSF---ETNYKEVSKIYDQMQRAGL 267
I + +K Y KA +F+ + G V YN++++ ++E + +M+ AG+
Sbjct: 58 IELSRKLCDYSKAISIFSRLKXSGFXPDLVAYNAMINVFGKAKLFREARSLISEMKTAGV 117
Query: 268 QPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQART 327
P+ SY+ L+ Y + ++ EAL+VF EM + NI++D + GM +A
Sbjct: 118 MPNTTSYSTLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADK 177
Query: 328 VFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYA 387
+F MR+ P++ SY T+L Y +A A FR +++ NV+TY +++ Y
Sbjct: 178 LFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYG 237
Query: 388 KVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQK 447
K EK + +M+ G++PN ++TI+ +GK D A + ++++ S G DQ
Sbjct: 238 KTLEHEKANNLIQEMQSRGVEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQI 297
Query: 448 AKNILLSLAKTADERNEANELLGNFNHPNNEP 479
++ + A A LL P+N P
Sbjct: 298 LFQTMIVAYERAGLVAHAKRLLHELKRPDNIP 329
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 73/303 (24%), Positives = 153/303 (50%), Gaps = 6/303 (1%)
Query: 122 MNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANK 181
M ++ +P +++ L+ +G+ G + A + ++M+ + Y +++L +
Sbjct: 7 MRQRALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDQVPGDLVLYSNLIELSRKLCD 66
Query: 182 FKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVT 241
+ +A +F L + S PD ++ MI ++ KA + +AR L + M GV +T +
Sbjct: 67 YSKAISIFSRL---KXSGFXPDLVAYNAMINVFGKAKLFREARSLISEMKTAGVMPNTTS 123
Query: 242 YNSLMSFETNYK---EVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEML 298
Y++L++ K E ++ +M+ D+ + ++I+ YG+ +EA +F M
Sbjct: 124 YSTLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMR 183
Query: 299 DAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDME 358
G+ P +YN LL + + + +A +F+ M+R ++ +Y +M+ Y + E
Sbjct: 184 KMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHE 243
Query: 359 GAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIM 418
A + ++ G PN ITY T+I + KV L++ ++ K+R +G++ +Q +F T++
Sbjct: 244 KANNLIQEMQSRGVEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQILFQTMI 303
Query: 419 DAY 421
AY
Sbjct: 304 VAY 306
Score = 85.9 bits (211), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 84/190 (44%)
Query: 292 AVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAY 351
+F+EM + P Y+ L+ F G+ D A + + M +D+ D+ Y+ ++
Sbjct: 2 GLFDEMRQRALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDQVPGDLVLYSNLIELS 61
Query: 352 VNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQ 411
D A F RLK GF P+++ Y +I + K + + +M+ G+ PN
Sbjct: 62 RKLCDYSKAISIFSRLKXSGFXPDLVAYNAMINVFGKAKLFREARSLISEMKTAGVMPNT 121
Query: 412 TIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGN 471
T ++T++ Y +NK F A+ + EM D NI++ + EA++L
Sbjct: 122 TSYSTLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWG 181
Query: 472 FNHPNNEPGI 481
EP +
Sbjct: 182 MRKMGIEPNV 191
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 59/244 (24%), Positives = 115/244 (47%), Gaps = 6/244 (2%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + + L+ YG F +A + M +K +VV++ ++M YG+ ++ A +
Sbjct: 190 NVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLI 249
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
+ MQS G P+++TY I+ ++ + K A +F L S ++ DQ +F MI Y
Sbjct: 250 QEMQSRGVEPNSITYSTIISIWGKVGKLDRAAMLFQKL---RSSGVEIDQILFQTMIVAY 306
Query: 215 KKAGGYEKARKLFA-LMAERGVQQSTVTYNSLMSFETNYKEVSKIYDQMQRAGLQPDVVS 273
++AG A++L L + + T + +++ +E + ++ Q AG D+
Sbjct: 307 ERAGLVAHAKRLLHELKRPDNIPRDTAIH--ILAGAGRIEEATYVFRQAIDAGEVKDITV 364
Query: 274 YALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMR 333
+ +I+ K ++ + VF++M G P I+L+A+ D+A V+ M+
Sbjct: 365 FERMIHLLSKYKKYSNVIEVFDKMRGLGYFPDSDVIAIVLNAYGKLQEFDKANDVYMEMQ 424
Query: 334 RDRC 337
C
Sbjct: 425 EVGC 428
Score = 44.3 bits (103), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 26/123 (21%), Positives = 51/123 (41%)
Query: 363 FFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYG 422
F ++Q P+ TY TLI + K + + KM + + + +++ +++
Sbjct: 3 LFDEMRQRALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDQVPGDLVLYSNLIELSR 62
Query: 423 KNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGIN 482
K D+ A+ + ++ GF PD A N ++++ A EA L+ P
Sbjct: 63 KLCDYSKAISIFSRLKXSGFXPDLVAYNAMINVFGKAKLFREARSLISEMKTAGVMPNTT 122
Query: 483 GLS 485
S
Sbjct: 123 SYS 125
>gi|356503775|ref|XP_003520679.1| PREDICTED: pentatricopeptide repeat-containing protein At5g12100,
mitochondrial-like [Glycine max]
Length = 777
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 95/325 (29%), Positives = 164/325 (50%), Gaps = 15/325 (4%)
Query: 133 SHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTL 192
++ L+ R GR + AE + ++ +G PS ++Y I++ + + K+A +T
Sbjct: 327 TYCILLNGLCRVGRIEKAEEVLAKLVENGVTPSKISYNILVNAYCQEGDVKKA---ILTT 383
Query: 193 LDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSF---E 249
E+ L+P++ F+ +I + + G + A M E+GV + TYNSL++ +
Sbjct: 384 EQMEERGLEPNRITFNTVISKFCETGEVDHAETWVRRMVEKGVSPTVETYNSLINGYGQK 443
Query: 250 TNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAY 309
++ + D+M +AG++P+V+SY LIN K R+ +A V +M+ GV P + Y
Sbjct: 444 GHFVRCFEFLDEMDKAGIKPNVISYGSLINCLCKDRKLIDAEIVLADMIGRGVSPNAEIY 503
Query: 310 NILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQ 369
N+L++A + A F M + + +Y T+++ ++ AE F ++
Sbjct: 504 NMLIEASCSLSKLKDAFRFFDEMIQSGIDATLVTYNTLINGLGRNGRVKKAEDLFLQMAG 563
Query: 370 DGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDS 429
G P+VITY +LI GYAK N +K +E+YDKM++ GIKP F ++ A K
Sbjct: 564 KGCNPDVITYNSLISGYAKSVNTQKCLELYDKMKILGIKPTVGTFHPLIYACRK-----E 618
Query: 430 AVV----WYKEMESCGFPPDQKAKN 450
VV ++EM PDQ N
Sbjct: 619 GVVTMDKMFQEMLQMDLVPDQFVYN 643
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 83/346 (23%), Positives = 169/346 (48%), Gaps = 7/346 (2%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + F +I+ + + G+ + AE + M +KG +P+V ++ +L+ YG+ G +
Sbjct: 394 NRITFNTVISKFCETGEVDHAETWVRRMVEKGVSPTVETYNSLINGYGQKGHFVRCFEFL 453
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
M +G +P+ ++Y ++ + K +AE + L D + P+ ++++M+I
Sbjct: 454 DEMDKAGIKPNVISYGSLINCLCKDRKLIDAE---IVLADMIGRGVSPNAEIYNMLIEAS 510
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSL---MSFETNYKEVSKIYDQMQRAGLQPDV 271
+ A + F M + G+ + VTYN+L + K+ ++ QM G PDV
Sbjct: 511 CSLSKLKDAFRFFDEMIQSGIDATLVTYNTLINGLGRNGRVKKAEDLFLQMAGKGCNPDV 570
Query: 272 VSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKC 331
++Y LI+ Y K+ ++ L ++++M G++PT ++ L+ A G+V + +F+
Sbjct: 571 ITYNSLISGYAKSVNTQKCLELYDKMKILGIKPTVGTFHPLIYACRKEGVVTMDK-MFQE 629
Query: 332 MRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNN 391
M + PD Y M+ +Y ++ A +++ G + +TY +LI Y +
Sbjct: 630 MLQMDLVPDQFVYNEMIYSYAEDGNVMKAMSLHQQMVDQGVDCDKVTYNSLILAYLRDRR 689
Query: 392 LEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEM 437
+ ++ + D M+ G+ P + ++ KDF+ A WY+EM
Sbjct: 690 VSEIKHLVDDMKAKGLVPKVDTYNILIKGLCDLKDFNGAYFWYREM 735
Score = 124 bits (312), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 88/397 (22%), Positives = 179/397 (45%), Gaps = 40/397 (10%)
Query: 94 FNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAI 153
+E + +L+ + G KAE+VL+ + + G PS +S+ L+ AY + G K A
Sbjct: 323 IDERTYCILLNGLCRVGRIEKAEEVLAKLVENGVTPSKISYNILVNAYCQEGDVKKAILT 382
Query: 154 FRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYM 213
+M+ G P+ +T+ ++ F E + AE ++++ SP + ++ +I
Sbjct: 383 TEQMEERGLEPNRITFNTVISKFCETGEVDHAETWVRRMVEKGVSP---TVETYNSLING 439
Query: 214 YKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEV---SKIYDQMQRAGLQPD 270
Y + G + + + M + G++ + ++Y SL++ +++ + M G+ P+
Sbjct: 440 YGQKGHFVRCFEFLDEMDKAGIKPNVISYGSLINCLCKDRKLIDAEIVLADMIGRGVSPN 499
Query: 271 VVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFK 330
Y +LI A + ++A F+EM+ +G+ T YN L++ +G V +A +F
Sbjct: 500 AEIYNMLIEASCSLSKLKDAFRFFDEMIQSGIDATLVTYNTLINGLGRNGRVKKAEDLFL 559
Query: 331 CMRRDRCSPDICSYTTMLSAY-------------------------------VNASDMEG 359
M C+PD+ +Y +++S Y + A EG
Sbjct: 560 QMAGKGCNPDVITYNSLISGYAKSVNTQKCLELYDKMKILGIKPTVGTFHPLIYACRKEG 619
Query: 360 A---EKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTT 416
+K F+ + Q VP+ Y +I YA+ N+ K M ++ +M G+ ++ + +
Sbjct: 620 VVTMDKMFQEMLQMDLVPDQFVYNEMIYSYAEDGNVMKAMSLHQQMVDQGVDCDKVTYNS 679
Query: 417 IMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILL 453
++ AY +++ +M++ G P NIL+
Sbjct: 680 LILAYLRDRRVSEIKHLVDDMKAKGLVPKVDTYNILI 716
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 92/384 (23%), Positives = 172/384 (44%), Gaps = 38/384 (9%)
Query: 112 FNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQI 171
F K V + + G P V++ ++A + + M G PS Y +
Sbjct: 138 FEKTLAVFADVIDSGTRPDAVAYGKAVQAAVMLKDLDKGFELMKSMVKDGMGPSVFAYNL 197
Query: 172 ILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMA 231
+L + + K+A ++F ++ + P+ ++ +I Y K GG E+A M
Sbjct: 198 VLGGLCKVRRIKDARKLFDEMIQRN---MVPNTVTYNTLIDGYCKVGGIEEALGFKERMK 254
Query: 232 ERGVQQSTVTYNSLMSFETNYKEVS---KIYDQMQRAGLQP------------------- 269
E+ V+ + VTYNSL++ V ++ +M+ +G P
Sbjct: 255 EQNVECNLVTYNSLLNGLCGSGRVDDAREVLLEMEGSGFLPGGFLSFVFDDHSNGAGDDG 314
Query: 270 ---------DVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISG 320
D +Y +L+N + R E+A V ++++ GV P+ +YNIL++A+ G
Sbjct: 315 LFDGKEIRIDERTYCILLNGLCRVGRIEKAEEVLAKLVENGVTPSKISYNILVNAYCQEG 374
Query: 321 MVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYG 380
V +A + M P+ ++ T++S + +++ AE + RR+ + G P V TY
Sbjct: 375 DVKKAILTTEQMEERGLEPNRITFNTVISKFCETGEVDHAETWVRRMVEKGVSPTVETYN 434
Query: 381 TLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESC 440
+LI GY + + + E D+M GIKPN + ++++ K++ A + +M
Sbjct: 435 SLINGYGQKGHFVRCFEFLDEMDKAGIKPNVISYGSLINCLCKDRKLIDAEIVLADMIGR 494
Query: 441 GFPPDQKAKNILL----SLAKTAD 460
G P+ + N+L+ SL+K D
Sbjct: 495 GVSPNAEIYNMLIEASCSLSKLKD 518
Score = 98.6 bits (244), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 77/343 (22%), Positives = 151/343 (44%), Gaps = 40/343 (11%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
LI YG++G F + + L M+K G P+V+S+ +L+ + + +AE + M G
Sbjct: 436 LINGYGQKGHFVRCFEFLDEMDKAGIKPNVISYGSLINCLCKDRKLIDAEIVLADMIGRG 495
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
P+A Y ++++ +K K+A F ++ +S + ++ +I + G +
Sbjct: 496 VSPNAEIYNMLIEASCSLSKLKDAFRFFDEMI---QSGIDATLVTYNTLINGLGRNGRVK 552
Query: 222 KARKLFALMAERGVQQSTVTYNSLMSF---ETNYKEVSKIYDQMQRAGLQPDVVSYALLI 278
KA LF MA +G +TYNSL+S N ++ ++YD+M+ G++P V ++ LI
Sbjct: 553 KAEDLFLQMAGKGCNPDVITYNSLISGYAKSVNTQKCLELYDKMKILGIKPTVGTFHPLI 612
Query: 279 NA----------------------------------YGKARREEEALAVFEEMLDAGVRP 304
A Y + +A+++ ++M+D GV
Sbjct: 613 YACRKEGVVTMDKMFQEMLQMDLVPDQFVYNEMIYSYAEDGNVMKAMSLHQQMVDQGVDC 672
Query: 305 THKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFF 364
YN L+ A+ V + + + M+ P + +Y ++ + D GA ++
Sbjct: 673 DKVTYNSLILAYLRDRRVSEIKHLVDDMKAKGLVPKVDTYNILIKGLCDLKDFNGAYFWY 732
Query: 365 RRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGI 407
R + + G + NV LI G + L + + ++ + G+
Sbjct: 733 REMVERGLLLNVSMCYQLISGLREEGMLREAQIVSSELSIGGL 775
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 78/343 (22%), Positives = 145/343 (42%), Gaps = 13/343 (3%)
Query: 115 AEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILK 174
A K+ M ++ P+ V++ L++ Y + G + A RM+ + +TY +L
Sbjct: 211 ARKLFDEMIQRNMVPNTVTYNTLIDGYCKVGGIEEALGFKERMKEQNVECNLVTYNSLLN 270
Query: 175 LFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERG 234
+ + +A EV LL+ E S P F ++ G + L +
Sbjct: 271 GLCGSGRVDDAREV---LLEMEGSGFLPGG--FLSFVFDDHSNGAGDDG-----LFDGKE 320
Query: 235 VQQSTVTYNSLMSFETNYKEVSK---IYDQMQRAGLQPDVVSYALLINAYGKARREEEAL 291
++ TY L++ + K + ++ G+ P +SY +L+NAY + ++A+
Sbjct: 321 IRIDERTYCILLNGLCRVGRIEKAEEVLAKLVENGVTPSKISYNILVNAYCQEGDVKKAI 380
Query: 292 AVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAY 351
E+M + G+ P +N ++ F +G VD A T + M SP + +Y ++++ Y
Sbjct: 381 LTTEQMEERGLEPNRITFNTVISKFCETGEVDHAETWVRRMVEKGVSPTVETYNSLINGY 440
Query: 352 VNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQ 411
+F + + G PNVI+YG+LI K L + M G+ PN
Sbjct: 441 GQKGHFVRCFEFLDEMDKAGIKPNVISYGSLINCLCKDRKLIDAEIVLADMIGRGVSPNA 500
Query: 412 TIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLS 454
I+ +++A A ++ EM G N L++
Sbjct: 501 EIYNMLIEASCSLSKLKDAFRFFDEMIQSGIDATLVTYNTLIN 543
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/254 (22%), Positives = 101/254 (39%), Gaps = 36/254 (14%)
Query: 245 LMSFETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRP 304
L S E + +Y M++ G P S L+ +R E+ LAVF +++D+G RP
Sbjct: 96 LCSVSKMLDEATDLYSTMRKDGFVPSTRSVNRLLRTLVDSRHFEKTLAVFADVIDSGTRP 155
Query: 305 THKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFF 364
AY G QA + K D++ +
Sbjct: 156 DAVAY----------GKAVQAAVMLK-------------------------DLDKGFELM 180
Query: 365 RRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKN 424
+ + +DG P+V Y ++ G KV ++ +++D+M + PN + T++D Y K
Sbjct: 181 KSMVKDGMGPSVFAYNLVLGGLCKVRRIKDARKLFDEMIQRNMVPNTVTYNTLIDGYCKV 240
Query: 425 KDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGINGL 484
+ A+ + + M+ + N LL+ + ++A E+L PG L
Sbjct: 241 GGIEEALGFKERMKEQNVECNLVTYNSLLNGLCGSGRVDDAREVLLEMEGSGFLPG-GFL 299
Query: 485 SISVDEEDDDDDDD 498
S D+ + DD
Sbjct: 300 SFVFDDHSNGAGDD 313
>gi|224069551|ref|XP_002326371.1| predicted protein [Populus trichocarpa]
gi|222833564|gb|EEE72041.1| predicted protein [Populus trichocarpa]
Length = 726
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 104/441 (23%), Positives = 200/441 (45%), Gaps = 13/441 (2%)
Query: 62 LVLGTLVRLKQLKKWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSF 121
++L + + ++K+ V +E+L + + + + N M + AY K G+ +A +S
Sbjct: 187 MMLARFLMIDEMKR--VYTEMLNDMIVPNIYTLNTM-----VNAYSKMGNIVEANLYVSK 239
Query: 122 MNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANK 181
+ + G +P ++T+L+ Y R +A +F M + G R + ++Y I+ EA +
Sbjct: 240 IFQAGLSPDSFTYTSLILGYCRNNDVNSAYKVFNMMPNKGCRRNEVSYTTIIHGLCEAGR 299
Query: 182 FKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVT 241
E +F + +++ P + + ++I+ + LF M ER + + T
Sbjct: 300 IDEGISLFKKMREDD---CYPTVRTYTVIIHALFGNDRNLEGMDLFNEMRERSCEPNVHT 356
Query: 242 YNSL---MSFETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEML 298
Y + M E E +I ++M GL P VV+Y LI Y + R E AL + M
Sbjct: 357 YTVMVDAMCKERKLDESRRILNEMMEKGLVPSVVTYNALIRGYCEEGRIEAALEILGLME 416
Query: 299 DAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDME 358
RP + YN L+ F+ V +A T+ M + +P + +Y +++ A +
Sbjct: 417 SNNCRPNERTYNELICGFSKRKHVHKAMTLLSKMLESKLTPSLVTYNSLIHVQCKAGHFD 476
Query: 359 GAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIM 418
A K LK++G VP+ TY I K +E+ ++++ ++ GIK N+ ++T ++
Sbjct: 477 SAYKLLDLLKENGLVPDQWTYSVFIDTLCKSKRMEEACDLFNSLKEKGIKANEVMYTALI 536
Query: 419 DAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNE 478
D + K D A+ + M S P+ N L+ + E ++ N + +
Sbjct: 537 DGHCKAGKIDEAISLLERMHSEDCLPNSSTYNSLIYGVCKEGKVQEGLSMVENMSKMGVK 596
Query: 479 PGINGLSISVDEEDDDDDDDE 499
P + +I ++E + D D
Sbjct: 597 PTVATYTILIEEMLREGDFDH 617
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 92/363 (25%), Positives = 171/363 (47%), Gaps = 8/363 (2%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + +++ A K+ +++ ++L+ M +KG PSVV++ AL+ Y GR + A I
Sbjct: 353 NVHTYTVMVDAMCKERKLDESRRILNEMMEKGLVPSVVTYNALIRGYCEEGRIEAALEIL 412
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEE-KSPLKPDQKMFHMMIYM 213
M+S+ RP+ TY ++ F + +A MTLL + +S L P ++ +I++
Sbjct: 413 GLMESNNCRPNERTYNELICGFSKRKHVHKA----MTLLSKMLESKLTPSLVTYNSLIHV 468
Query: 214 YKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYK---EVSKIYDQMQRAGLQPD 270
KAG ++ A KL L+ E G+ TY+ + K E +++ ++ G++ +
Sbjct: 469 QCKAGHFDSAYKLLDLLKENGLVPDQWTYSVFIDTLCKSKRMEEACDLFNSLKEKGIKAN 528
Query: 271 VVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFK 330
V Y LI+ + KA + +EA+++ E M P YN L+ G V + ++ +
Sbjct: 529 EVMYTALIDGHCKAGKIDEAISLLERMHSEDCLPNSSTYNSLIYGVCKEGKVQEGLSMVE 588
Query: 331 CMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVN 390
M + P + +YT ++ + D + A + F ++ G P+V TY I Y
Sbjct: 589 NMSKMGVKPTVATYTILIEEMLREGDFDHANRVFNQMVSFGHKPDVYTYTAFIHTYCTSG 648
Query: 391 NLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKN 450
N+++ + +M G+ P+ +T ++ AY + A K M G P N
Sbjct: 649 NVKEAEGMMARMIEAGVMPDSLTYTLLISAYERLGLAYDAFNVLKRMLDAGCDPSHPIWN 708
Query: 451 ILL 453
L+
Sbjct: 709 NLI 711
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 100/428 (23%), Positives = 188/428 (43%), Gaps = 28/428 (6%)
Query: 58 LPKDLVLGTLVRLKQLKKWNVVSEVLEWLRI-QSWWDFNEMDFLMLITAYGKQGDFNKAE 116
+P L T+V K N+V L +I Q+ + + LI Y + D N A
Sbjct: 211 VPNIYTLNTMVNAYS-KMGNIVEANLYVSKIFQAGLSPDSFTYTSLILGYCRNNDVNSAY 269
Query: 117 KVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLF 176
KV + M KG + VS+T ++ GR ++F++M+ P+ TY +I+
Sbjct: 270 KVFNMMPNKGCRRNEVSYTTIIHGLCEAGRIDEGISLFKKMREDDCYPTVRTYTVIIHAL 329
Query: 177 VEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQ 236
++ E ++F + E+S +P+ + +M+ K +++R++ M E+G+
Sbjct: 330 FGNDRNLEGMDLFNEM--RERS-CEPNVHTYTVMVDAMCKERKLDESRRILNEMMEKGLV 386
Query: 237 QSTVTYNSLMSFETNYKEVSKIYDQMQRAGL------QPDVVSYALLINAYGKARREEEA 290
S VTYN+L+ Y E +I ++ GL +P+ +Y LI + K + +A
Sbjct: 387 PSVVTYNALIR---GYCEEGRIEAALEILGLMESNNCRPNERTYNELICGFSKRKHVHKA 443
Query: 291 LAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSA 350
+ + +ML++ + P+ YN L+ +G D A + ++ + PD +Y+ +
Sbjct: 444 MTLLSKMLESKLTPSLVTYNSLIHVQCKAGHFDSAYKLLDLLKENGLVPDQWTYSVFIDT 503
Query: 351 YVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPN 410
+ ME A F LK+ G N + Y LI G+ K +++ + + ++M PN
Sbjct: 504 LCKSKRMEEACDLFNSLKEKGIKANEVMYTALIDGHCKAGKIDEAISLLERMHSEDCLPN 563
Query: 411 QTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELL- 469
+ + +++ K + + M G P IL+ E+L
Sbjct: 564 SSTYNSLIYGVCKEGKVQEGLSMVENMSKMGVKPTVATYTILIE------------EMLR 611
Query: 470 -GNFNHPN 476
G+F+H N
Sbjct: 612 EGDFDHAN 619
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 76/336 (22%), Positives = 157/336 (46%), Gaps = 6/336 (1%)
Query: 122 MNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANK 181
M ++ P+V ++T +++A + + + I M G PS +TY +++ + E +
Sbjct: 345 MRERSCEPNVHTYTVMVDAMCKERKLDESRRILNEMMEKGLVPSVVTYNALIRGYCEEGR 404
Query: 182 FKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVT 241
+ A E+ + E + +P+++ ++ +I + K KA L + M E + S VT
Sbjct: 405 IEAALEILGLM---ESNNCRPNERTYNELICGFSKRKHVHKAMTLLSKMLESKLTPSLVT 461
Query: 242 YNSLMSFET---NYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEML 298
YNSL+ + ++ K+ D ++ GL PD +Y++ I+ K++R EEA +F +
Sbjct: 462 YNSLIHVQCKAGHFDSAYKLLDLLKENGLVPDQWTYSVFIDTLCKSKRMEEACDLFNSLK 521
Query: 299 DAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDME 358
+ G++ Y L+D +G +D+A ++ + M + C P+ +Y +++ ++
Sbjct: 522 EKGIKANEVMYTALIDGHCKAGKIDEAISLLERMHSEDCLPNSSTYNSLIYGVCKEGKVQ 581
Query: 359 GAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIM 418
+ + G P V TY LI+ + + + ++++M G KP+ +T +
Sbjct: 582 EGLSMVENMSKMGVKPTVATYTILIEEMLREGDFDHANRVFNQMVSFGHKPDVYTYTAFI 641
Query: 419 DAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLS 454
Y + + A M G PD +L+S
Sbjct: 642 HTYCTSGNVKEAEGMMARMIEAGVMPDSLTYTLLIS 677
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 71/308 (23%), Positives = 142/308 (46%), Gaps = 6/308 (1%)
Query: 165 SALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKAR 224
S +Y +L + E + V+ +L++ + P+ + M+ Y K G +A
Sbjct: 178 SVRSYNELLMMLARFLMIDEMKRVYTEMLNDM---IVPNIYTLNTMVNAYSKMGNIVEAN 234
Query: 225 KLFALMAERGVQQSTVTYNSLMSFETNYKEVS---KIYDQMQRAGLQPDVVSYALLINAY 281
+ + + G+ + TY SL+ +V+ K+++ M G + + VSY +I+
Sbjct: 235 LYVSKIFQAGLSPDSFTYTSLILGYCRNNDVNSAYKVFNMMPNKGCRRNEVSYTTIIHGL 294
Query: 282 GKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDI 341
+A R +E +++F++M + PT + Y +++ A + + +F MR C P++
Sbjct: 295 CEAGRIDEGISLFKKMREDDCYPTVRTYTVIIHALFGNDRNLEGMDLFNEMRERSCEPNV 354
Query: 342 CSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDK 401
+YT M+ A ++ + + + + G VP+V+TY LI+GY + +E +EI
Sbjct: 355 HTYTVMVDAMCKERKLDESRRILNEMMEKGLVPSVVTYNALIRGYCEEGRIEAALEILGL 414
Query: 402 MRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADE 461
M N +PN+ + ++ + K K A+ +M P N L+ + A
Sbjct: 415 MESNNCRPNERTYNELICGFSKRKHVHKAMTLLSKMLESKLTPSLVTYNSLIHVQCKAGH 474
Query: 462 RNEANELL 469
+ A +LL
Sbjct: 475 FDSAYKLL 482
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/193 (23%), Positives = 89/193 (46%)
Query: 307 KAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRR 366
++YN LL A M+D+ + V+ M D P+I + TM++AY ++ A + +
Sbjct: 180 RSYNELLMMLARFLMIDEMKRVYTEMLNDMIVPNIYTLNTMVNAYSKMGNIVEANLYVSK 239
Query: 367 LKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKD 426
+ Q G P+ TY +LI GY + N++ ++++ M G + N+ +TTI+ +
Sbjct: 240 IFQAGLSPDSFTYTSLILGYCRNNDVNSAYKVFNMMPNKGCRRNEVSYTTIIHGLCEAGR 299
Query: 427 FDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGINGLSI 486
D + +K+M P + +++ D E +L + EP ++ ++
Sbjct: 300 IDEGISLFKKMREDDCYPTVRTYTVIIHALFGNDRNLEGMDLFNEMRERSCEPNVHTYTV 359
Query: 487 SVDEEDDDDDDDE 499
VD + DE
Sbjct: 360 MVDAMCKERKLDE 372
Score = 40.4 bits (93), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 26/105 (24%), Positives = 51/105 (48%), Gaps = 4/105 (3%)
Query: 346 TMLSAYVNASDMEGAEKFFRRLKQD----GFVPNVITYGTLIKGYAKVNNLEKMMEIYDK 401
+M+ A V+ D+ F R++ +D F +V +Y L+ A+ +++M +Y +
Sbjct: 145 SMIKACVSVDDIRFLLDFLRQMNRDDNDIKFKLSVRSYNELLMMLARFLMIDEMKRVYTE 204
Query: 402 MRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQ 446
M + I PN T+++AY K + A ++ ++ G PD
Sbjct: 205 MLNDMIVPNIYTLNTMVNAYSKMGNIVEANLYVSKIFQAGLSPDS 249
>gi|8778650|gb|AAF79658.1|AC025416_32 F5O11.4 [Arabidopsis thaliana]
Length = 975
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 91/397 (22%), Positives = 194/397 (48%), Gaps = 6/397 (1%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + F LI +G ++A +++ M + G+ P +++ L+ G+ A +
Sbjct: 255 NTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLI 314
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
+M G +P+A+TY +L + ++ + A E+ + E+ +K D + ++I
Sbjct: 315 DKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKM---EERNIKLDAVKYSIIIDGL 371
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETN---YKEVSKIYDQMQRAGLQPDV 271
K G + A LF M +G+ + +TYN L+ N + + +K+ M + + P+V
Sbjct: 372 CKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNV 431
Query: 272 VSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKC 331
V++++LI+++ K + EA + +EM+ G+ P Y L+D F +D+A +
Sbjct: 432 VTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDL 491
Query: 332 MRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNN 391
M C P+I ++ +++ Y A+ ++ + FR++ G V + +TY TLI+G+ ++
Sbjct: 492 MVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGK 551
Query: 392 LEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNI 451
L E++ +M + PN + ++D N + + A+ ++++E D NI
Sbjct: 552 LNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNI 611
Query: 452 LLSLAKTADERNEANELLGNFNHPNNEPGINGLSISV 488
++ A + ++A +L + +PG+ +I +
Sbjct: 612 IIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMI 648
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 84/365 (23%), Positives = 169/365 (46%), Gaps = 6/365 (1%)
Query: 94 FNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAI 153
+ + + ++I K G + A + + M KG +++++ L+ + GR+ + +
Sbjct: 359 LDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKL 418
Query: 154 FRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYM 213
R M P+ +T+ +++ FV+ K +EAEE+ ++ + PD + +I
Sbjct: 419 LRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRG---IAPDTITYTSLIDG 475
Query: 214 YKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVS---KIYDQMQRAGLQPD 270
+ K +KA ++ LM +G + T+N L++ + +++ +M G+ D
Sbjct: 476 FCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVAD 535
Query: 271 VVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFK 330
V+Y LI + + + A +F+EM+ V P Y ILLD +G ++A +F+
Sbjct: 536 TVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFE 595
Query: 331 CMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVN 390
+ + + DI Y ++ NAS ++ A F L G P V TY +I G K
Sbjct: 596 KIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKG 655
Query: 391 NLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKN 450
L + ++ KM +G P+ + ++ A+ + D +V +E++ CGF D
Sbjct: 656 PLSEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEELKRCGFSVDASTIK 715
Query: 451 ILLSL 455
+++ +
Sbjct: 716 MVIDM 720
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 84/362 (23%), Positives = 170/362 (46%), Gaps = 6/362 (1%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + + ++ K G A ++L M ++ V ++ +++ + G NA +F
Sbjct: 325 NAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLF 384
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
M+ G + +TY I++ F A ++ + ++ L D K + P+ F ++I +
Sbjct: 385 NEMEMKGITTNIITYNILIGGFCNAGRWDDGAKL---LRDMIKRKINPNVVTFSVLIDSF 441
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSLM---SFETNYKEVSKIYDQMQRAGLQPDV 271
K G +A +L M RG+ T+TY SL+ E + + +++ D M G P++
Sbjct: 442 VKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNI 501
Query: 272 VSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKC 331
++ +LIN Y KA R ++ L +F +M GV YN L+ F G ++ A+ +F+
Sbjct: 502 RTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQE 561
Query: 332 MRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNN 391
M + P+I +Y +L + + E A + F ++++ ++ Y +I G +
Sbjct: 562 MVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASK 621
Query: 392 LEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNI 451
++ +++ + + G+KP + ++ K A + +++ME G PD NI
Sbjct: 622 VDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNI 681
Query: 452 LL 453
L+
Sbjct: 682 LI 683
Score = 128 bits (322), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 79/334 (23%), Positives = 165/334 (49%), Gaps = 6/334 (1%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + + +LI + G ++ K+L M K+ P+VV+ + L++++ + G+ + AE +
Sbjct: 395 NIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELH 454
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
+ M G P +TY ++ F + N +A ++ ++ + P+ + F+++I Y
Sbjct: 455 KEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKG---CDPNIRTFNILINGY 511
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSLMS--FETNYKEVSK-IYDQMQRAGLQPDV 271
KA + +LF M+ RGV TVTYN+L+ E V+K ++ +M + P++
Sbjct: 512 CKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNI 571
Query: 272 VSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKC 331
V+Y +L++ E+AL +FE++ + + YNI++ + VD A +F
Sbjct: 572 VTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCS 631
Query: 332 MRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNN 391
+ P + +Y M+ + AE FR++++DG P+ TY LI+ + +
Sbjct: 632 LPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGD 691
Query: 392 LEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNK 425
K +++ ++++ G + + ++D +K
Sbjct: 692 ATKSVKLIEELKRCGFSVDASTIKMVIDMLSDDK 725
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 88/406 (21%), Positives = 179/406 (44%), Gaps = 6/406 (1%)
Query: 97 MDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRR 156
+DF L +A K ++ + M KG A ++ + + ++ + R + A + +
Sbjct: 187 IDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIMINCFCRCRKLCLAFSAMGK 246
Query: 157 MQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKK 216
+ G P+ +T+ ++ + EA E+ +++ KPD + ++
Sbjct: 247 IIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGH---KPDLITINTLVNGLCL 303
Query: 217 AGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVS---KIYDQMQRAGLQPDVVS 273
+G +A L M E G Q + VTY +++ + + ++ +M+ ++ D V
Sbjct: 304 SGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVK 363
Query: 274 YALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMR 333
Y+++I+ K + A +F EM G+ YNIL+ F +G D + + M
Sbjct: 364 YSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMI 423
Query: 334 RDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLE 393
+ + +P++ +++ ++ ++V + AE+ + + G P+ ITY +LI G+ K N+L+
Sbjct: 424 KRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLD 483
Query: 394 KMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILL 453
K ++ D M G PN F +++ Y K D + +++M G D N L+
Sbjct: 484 KANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLI 543
Query: 454 SLAKTADERNEANELLGNFNHPNNEPGINGLSISVDEEDDDDDDDE 499
+ N A EL P I I +D D+ + ++
Sbjct: 544 QGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEK 589
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 52/235 (22%), Positives = 109/235 (46%), Gaps = 6/235 (2%)
Query: 86 LRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGG 145
L + D N F +LI Y K + ++ M+ +G V++ L++ + G
Sbjct: 491 LMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELG 550
Query: 146 RYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQK 205
+ A+ +F+ M S P+ +TY+I+L + + ++A E+F + EKS ++ D
Sbjct: 551 KLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKI---EKSKMELDIG 607
Query: 206 MFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSL---MSFETNYKEVSKIYDQM 262
+++++I+ A + A LF + +GV+ TYN + + + E ++ +M
Sbjct: 608 IYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKM 667
Query: 263 QRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFA 317
+ G PD +Y +LI A+ +++ + EE+ G +++D +
Sbjct: 668 EEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEELKRCGFSVDASTIKMVIDMLS 722
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 38/184 (20%), Positives = 83/184 (45%)
Query: 286 REEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYT 345
+ ++A+ +F +M+ + PT ++ L A A + D + K M + ++ + +
Sbjct: 166 KADDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLS 225
Query: 346 TMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVN 405
M++ + + A ++ + G+ PN IT+ TLI G + + +E+ D+M
Sbjct: 226 IMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEM 285
Query: 406 GIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEA 465
G KP+ T+++ + A++ +M G P+ +L++ + + A
Sbjct: 286 GHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALA 345
Query: 466 NELL 469
ELL
Sbjct: 346 MELL 349
>gi|255661204|gb|ACU25771.1| pentatricopeptide repeat-containing protein [Citharexylum
ligustrinum]
Length = 426
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 96/377 (25%), Positives = 180/377 (47%), Gaps = 39/377 (10%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
LI K D++KA + S + + G P V++ +++ +G+ +K A ++ M+++G
Sbjct: 50 LIELSRKLCDYSKAISIFSRLKRSGITPDXVAYNSMINVFGKAKLFKEARSLISEMKTAG 109
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
P ++Y +L ++VE KF EA VF + E K L D ++MI +Y + +
Sbjct: 110 VXPDTVSYSTLLTMYVENQKFLEALSVFAEM-REIKCSL--DLTTCNIMIDVYGQLDMAK 166
Query: 222 KARKLFALMAERGVQQSTVTYNSLMSFETN---YKEVSKIYDQMQRAGLQPDVVSYALLI 278
+A KLF M + G++ + ++YN+L+ + + E ++ MQR ++ +VV+Y ++
Sbjct: 167 EADKLFWSMRKIGIEPNVISYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNTMM 226
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCS 338
YGK E+A + +EM + G+ P Y+ ++ + G +D+A +F+ +R
Sbjct: 227 MIYGKTLEHEKANNLIQEMHNXGIEPNAITYSTIISIWGKVGKLDRAAXLFQKLRSSGVE 286
Query: 339 PDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVP------------------------ 374
D Y TM+ AY A + A++ LK+ +P
Sbjct: 287 IDQVLYQTMIVAYERAGLVAHAKRLLHELKRPDNIPRDTAXHILAGAGRIEEATWVFRQA 346
Query: 375 -------NVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDF 427
++ + +I ++K ++E++DKMR G P+ + +++AYGK +F
Sbjct: 347 IDAGEVKDITVFSRMIDLFSKYKKYANVVEVFDKMRGLGYFPDSNVIALVLNAYGKLHEF 406
Query: 428 DSAVVWYKEM--ESCGF 442
D A Y M E C F
Sbjct: 407 DKAHXVYMNMQDEGCAF 423
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 87/319 (27%), Positives = 153/319 (47%), Gaps = 6/319 (1%)
Query: 164 PSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKA 223
P TY ++ F + F +A ++ +++++ P D ++ +I + +K Y KA
Sbjct: 7 PERYTYSTLITHFGKEGLFDDALS-WLQXMEQDRVP--GDLVLYSNLIELSRKLCDYSKA 63
Query: 224 RKLFALMAERGVQQSTVTYNSLMSF---ETNYKEVSKIYDQMQRAGLQPDVVSYALLINA 280
+F+ + G+ V YNS+++ +KE + +M+ AG+ PD VSY+ L+
Sbjct: 64 ISIFSRLKRSGITPDXVAYNSMINVFGKAKLFKEARSLISEMKTAGVXPDTVSYSTLLTM 123
Query: 281 YGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPD 340
Y + ++ EAL+VF EM + NI++D + M +A +F MR+ P+
Sbjct: 124 YVENQKFLEALSVFAEMREIKCSLDLTTCNIMIDVYGQLDMAKEADKLFWSMRKIGIEPN 183
Query: 341 ICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYD 400
+ SY T+L Y +A A FR +++ NV+TY T++ Y K EK +
Sbjct: 184 VISYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNTMMMIYGKTLEHEKANNLIQ 243
Query: 401 KMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTAD 460
+M GI+PN ++TI+ +GK D A ++++ S G DQ ++ + A
Sbjct: 244 EMHNXGIEPNAITYSTIISIWGKVGKLDRAAXLFQKLRSSGVEIDQVLYQTMIVAYERAG 303
Query: 461 ERNEANELLGNFNHPNNEP 479
A LL P+N P
Sbjct: 304 LVAHAKRLLHELKRPDNIP 322
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 42/181 (23%), Positives = 81/181 (44%)
Query: 301 GVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGA 360
+ P Y+ L+ F G+ D A + + M +DR D+ Y+ ++ D A
Sbjct: 4 ALSPERYTYSTLITHFGKEGLFDDALSWLQXMEQDRVPGDLVLYSNLIELSRKLCDYSKA 63
Query: 361 EKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDA 420
F RLK+ G P+ + Y ++I + K ++ + +M+ G+ P+ ++T++
Sbjct: 64 ISIFSRLKRSGITPDXVAYNSMINVFGKAKLFKEARSLISEMKTAGVXPDTVSYSTLLTM 123
Query: 421 YGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPG 480
Y +N+ F A+ + EM D NI++ + D EA++L + EP
Sbjct: 124 YVENQKFLEALSVFAEMREIKCSLDLTTCNIMIDVYGQLDMAKEADKLFWSMRKIGIEPN 183
Query: 481 I 481
+
Sbjct: 184 V 184
Score = 65.5 bits (158), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 50/219 (22%), Positives = 95/219 (43%), Gaps = 1/219 (0%)
Query: 263 QRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMV 322
ZRA L P+ +Y+ LI +GK ++AL+ + M V Y+ L++
Sbjct: 2 ZRA-LSPERYTYSTLITHFGKEGLFDDALSWLQXMEQDRVPGDLVLYSNLIELSRKLCDY 60
Query: 323 DQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTL 382
+A ++F ++R +PD +Y +M++ + A + A +K G P+ ++Y TL
Sbjct: 61 SKAISIFSRLKRSGITPDXVAYNSMINVFGKAKLFKEARSLISEMKTAGVXPDTVSYSTL 120
Query: 383 IKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGF 442
+ Y + + + ++ +MR + T ++D YG+ A + M G
Sbjct: 121 LTMYVENQKFLEALSVFAEMREIKCSLDLTTCNIMIDVYGQLDMAKEADKLFWSMRKIGI 180
Query: 443 PPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGI 481
P+ + N LL + A+ EA L N E +
Sbjct: 181 EPNVISYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNV 219
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/123 (23%), Positives = 66/123 (53%)
Query: 333 RRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNL 392
R SP+ +Y+T+++ + + A + + ++QD +++ Y LI+ K+ +
Sbjct: 1 RZRALSPERYTYSTLITHFGKEGLFDDALSWLQXMEQDRVPGDLVLYSNLIELSRKLCDY 60
Query: 393 EKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNIL 452
K + I+ +++ +GI P+ + ++++ +GK K F A EM++ G PD + + L
Sbjct: 61 SKAISIFSRLKRSGITPDXVAYNSMINVFGKAKLFKEARSLISEMKTAGVXPDTVSYSTL 120
Query: 453 LSL 455
L++
Sbjct: 121 LTM 123
>gi|225189439|emb|CAR70003.1| pentatricopeptide repeat(PPR)-containing protein At1g12700
[Arabidopsis thaliana]
Length = 602
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 87/357 (24%), Positives = 175/357 (49%), Gaps = 6/357 (1%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
+I + + G + A + M KG SVV++ +L+ + G++ + + + M S
Sbjct: 234 IIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSRE 293
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
P+ +T+ ++L +FV+ K +EA E++ ++ + P+ ++ ++ Y
Sbjct: 294 IVPNVITFNVLLDVFVKEGKLQEANELYKEMITR---GISPNIITYNTLMDGYCMQNRLS 350
Query: 222 KARKLFALMAERGVQQSTVTYNSLMSFETNYKEVS---KIYDQMQRAGLQPDVVSYALLI 278
+A + LM VT+ SL+ K V K++ + + GL + V+Y++L+
Sbjct: 351 EANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILV 410
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCS 338
+ ++ + + A +F+EM+ GV P Y ILLD +G +++A +F+ +++ +
Sbjct: 411 QGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMD 470
Query: 339 PDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEI 398
I YTT++ +E A F L G PNV+TY +I G K +L + +
Sbjct: 471 LGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANIL 530
Query: 399 YDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSL 455
KM +G PN + T++ A+ ++ D ++ +EM+SCGF D + +++ +
Sbjct: 531 LRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDM 587
Score = 139 bits (349), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 106/475 (22%), Positives = 203/475 (42%), Gaps = 44/475 (9%)
Query: 44 AVAVLRSERTRGQPLPKDLVLGTLVR-LKQLKKWNVVSEVLEWLRIQSWWDFNEMDFLML 102
A+A+ + E R +PLP + + + K++N+V + + L + N ++
Sbjct: 72 AIALFQ-EMIRSRPLPGLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAH-NIYTLNIM 129
Query: 103 ITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGP 162
I + + A VL + K GY P + L+ G+ A + RM +G
Sbjct: 130 INCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLINGLCLEGKVSKAVVLVDRMVENGC 189
Query: 163 RPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEK 222
+P +TY I+ + + F L E+ +K D + +I + G +
Sbjct: 190 QPDMVTYNSIVNGICRSG---DTSLAFDMLRKMEERNVKADVFTYSTIIDSLCRDGCIDA 246
Query: 223 ARKLFALMAERGVQQSTVTYNSL---MSFETNYKEVSKIYDQMQRAGLQPDVVSYALLIN 279
A LF M +G++ S VTYNSL + + + + + M + P+V+++ +L++
Sbjct: 247 AISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLD 306
Query: 280 AYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSP 339
+ K + +EA +++EM+ G+ P YN L+D + + + +A + M R++CSP
Sbjct: 307 VFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSP 366
Query: 340 DICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFV-------------------------- 373
DI ++T+++ Y ++ K FR + + G V
Sbjct: 367 DIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELF 426
Query: 374 ---------PNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKN 424
P+V+TYG L+ G LEK +EI++ ++ + + ++TTI++ K
Sbjct: 427 QEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKG 486
Query: 425 KDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEP 479
+ A + + G P+ +++S +EAN LL N P
Sbjct: 487 GKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAP 541
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 71/336 (21%), Positives = 158/336 (47%), Gaps = 9/336 (2%)
Query: 41 VGSAVAVLRSERTRGQPLPKDLVLGTLVR-LKQLKKWNVVSEVLEWLRIQSWWDFNEMDF 99
+ +A+++ + T+G + +LVR L + KWN + +L+ + + N + F
Sbjct: 244 IDAAISLFKEMETKGIK-SSVVTYNSLVRGLCKAGKWNDGALLLKDM-VSREIVPNVITF 301
Query: 100 LMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQS 159
+L+ + K+G +A ++ M +G +P+++++ LM+ Y R A + M
Sbjct: 302 NVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVR 361
Query: 160 SGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGG 219
+ P +T+ ++K + + + +VF + K L + + +++ + ++G
Sbjct: 362 NKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNI---SKRGLVANAVTYSILVQGFCQSGK 418
Query: 220 YEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSK---IYDQMQRAGLQPDVVSYAL 276
+ A +LF M GV +TY L+ + ++ K I++ +Q++ + +V Y
Sbjct: 419 IKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTT 478
Query: 277 LINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDR 336
+I K + E+A +F + GV+P Y +++ G + +A + + M D
Sbjct: 479 IIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDG 538
Query: 337 CSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGF 372
+P+ C+Y T++ A++ D+ + K +K GF
Sbjct: 539 NAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGF 574
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 43/232 (18%), Positives = 103/232 (44%)
Query: 258 IYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFA 317
++ +M R+ P +V ++ +A + ++ L +++ G+ NI+++ F
Sbjct: 75 LFQEMIRSRPLPGLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIMINCFC 134
Query: 318 ISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVI 377
A +V + + PD ++ T+++ + A R+ ++G P+++
Sbjct: 135 RCCKTCFAYSVLGKVMKLGYEPDTTTFNTLINGLCLEGKVSKAVVLVDRMVENGCQPDMV 194
Query: 378 TYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEM 437
TY +++ G + + ++ KM +K + ++TI+D+ ++ D+A+ +KEM
Sbjct: 195 TYNSIVNGICRSGDTSLAFDMLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEM 254
Query: 438 ESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGINGLSISVD 489
E+ G N L+ A + N+ LL + P + ++ +D
Sbjct: 255 ETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLD 306
>gi|255558280|ref|XP_002520167.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223540659|gb|EEF42222.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 604
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 99/376 (26%), Positives = 177/376 (47%), Gaps = 14/376 (3%)
Query: 84 EWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGR 143
E+ ++ W+ + LM + + G +A +L M KG P VVS+T +++ Y
Sbjct: 100 EFPQLGVCWNTESYNILM--NSLFRLGKIREAHHLLMRMEFKGCIPDVVSYTTIIDGYCH 157
Query: 144 GGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPD 203
G + + + MQ G +P+ TY I+ L ++ K E E+V ++ K + PD
Sbjct: 158 VGELQKVVQLVKEMQLKGLKPNLYTYSSIILLLCKSGKVVEGEKVLREMM---KRGVFPD 214
Query: 204 QKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSL---MSFETNYKEVSKIYD 260
++ +I + K G + A KLF+ M R + ++ +++L +S E K+++
Sbjct: 215 HVIYTTLIDGFCKLGNTQAAYKLFSEMEAREIVPDSIAFSALICGLSGSGKVVEADKLFN 274
Query: 261 QMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISG 320
+M + G +PD V+Y LI+ Y K ++A + +M+ G+ P Y L D SG
Sbjct: 275 EMIKKGFEPDEVTYTALIDGYCKLGEMKKAFFLHNQMVQIGLTPNVVTYTALADGLCKSG 334
Query: 321 MVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYG 380
+D A + M R +I +Y T+++ A ++ A K +K+ G P+ ITY
Sbjct: 335 ELDTANELLHEMCRKGLQLNISTYNTIVNGLCKAGNILQAVKLMEEMKEAGLHPDTITYT 394
Query: 381 TLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAY---GKNKDFDSAVVWYKEM 437
TL+ Y K + K E+ +M G++P F +M+ GK +D + + W E
Sbjct: 395 TLMDAYYKTGEMVKARELLREMLDRGLQPTVVTFNVLMNGLCMSGKLEDGERLLKWMLEK 454
Query: 438 ESCGFPPDQKAKNILL 453
G P+ N ++
Sbjct: 455 ---GIMPNAATYNSIM 467
Score = 132 bits (331), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 85/357 (23%), Positives = 167/357 (46%), Gaps = 6/357 (1%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
LI + K G+ A K+ S M + P ++ +AL+ G+ A+ +F M G
Sbjct: 221 LIDGFCKLGNTQAAYKLFSEMEAREIVPDSIAFSALICGLSGSGKVVEADKLFNEMIKKG 280
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
P +TY ++ + + + K+A F + L P+ + + K+G +
Sbjct: 281 FEPDEVTYTALIDGYCKLGEMKKA---FFLHNQMVQIGLTPNVVTYTALADGLCKSGELD 337
Query: 222 KARKLFALMAERGVQQSTVTYNSL---MSFETNYKEVSKIYDQMQRAGLQPDVVSYALLI 278
A +L M +G+Q + TYN++ + N + K+ ++M+ AGL PD ++Y L+
Sbjct: 338 TANELLHEMCRKGLQLNISTYNTIVNGLCKAGNILQAVKLMEEMKEAGLHPDTITYTTLM 397
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCS 338
+AY K +A + EMLD G++PT +N+L++ +SG ++ + K M
Sbjct: 398 DAYYKTGEMVKARELLREMLDRGLQPTVVTFNVLMNGLCMSGKLEDGERLLKWMLEKGIM 457
Query: 339 PDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEI 398
P+ +Y +++ Y ++M + + +R + G VP+ TY LIKG+ K N+++ +
Sbjct: 458 PNAATYNSIMKQYCIRNNMRISTEIYRGMCAQGVVPDSNTYNILIKGHCKARNMKEAWFL 517
Query: 399 YDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSL 455
+ +M + + ++ + K K A ++EM G + N+ + +
Sbjct: 518 HKEMVEKRFNLTASSYNALIKGFFKRKKLLEARQLFEEMRREGLVASAEIYNLFVDM 574
Score = 115 bits (287), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 90/352 (25%), Positives = 152/352 (43%), Gaps = 13/352 (3%)
Query: 153 IFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIY 212
+F G + +Y I++ K +EA + M + E PD + +I
Sbjct: 97 VFSEFPQLGVCWNTESYNILMNSLFRLGKIREAHHLLMRM---EFKGCIPDVVSYTTIID 153
Query: 213 MYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEV---SKIYDQMQRAGLQP 269
Y G +K +L M +G++ + TY+S++ +V K+ +M + G+ P
Sbjct: 154 GYCHVGELQKVVQLVKEMQLKGLKPNLYTYSSIILLLCKSGKVVEGEKVLREMMKRGVFP 213
Query: 270 DVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVF 329
D V Y LI+ + K + A +F EM + P A++ L+ + SG V +A +F
Sbjct: 214 DHVIYTTLIDGFCKLGNTQAAYKLFSEMEAREIVPDSIAFSALICGLSGSGKVVEADKLF 273
Query: 330 KCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKV 389
M + PD +YT ++ Y +M+ A ++ Q G PNV+TY L G K
Sbjct: 274 NEMIKKGFEPDEVTYTALIDGYCKLGEMKKAFFLHNQMVQIGLTPNVVTYTALADGLCKS 333
Query: 390 NNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAK 449
L+ E+ +M G++ N + + TI++ K + AV +EM+ G PD
Sbjct: 334 GELDTANELLHEMCRKGLQLNISTYNTIVNGLCKAGNILQAVKLMEEMKEAGLHPDTITY 393
Query: 450 NILLSLAKTADERNEANELLGNFNHPNNEPGI-------NGLSISVDEEDDD 494
L+ E +A ELL +P + NGL +S ED +
Sbjct: 394 TTLMDAYYKTGEMVKARELLREMLDRGLQPTVVTFNVLMNGLCMSGKLEDGE 445
Score = 102 bits (253), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 76/318 (23%), Positives = 143/318 (44%), Gaps = 8/318 (2%)
Query: 88 IQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRY 147
I+ ++ +E+ + LI Y K G+ KA + + M + G P+VV++TAL + + G
Sbjct: 277 IKKGFEPDEVTYTALIDGYCKLGEMKKAFFLHNQMVQIGLTPNVVTYTALADGLCKSGEL 336
Query: 148 KNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEK-SPLKPDQKM 206
A + M G + + TY I+ +A +A + L++E K + L PD
Sbjct: 337 DTANELLHEMCRKGLQLNISTYNTIVNGLCKAGNILQA----VKLMEEMKEAGLHPDTIT 392
Query: 207 FHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLM---SFETNYKEVSKIYDQMQ 263
+ ++ Y K G KAR+L M +RG+Q + VT+N LM ++ ++ M
Sbjct: 393 YTTLMDAYYKTGEMVKARELLREMLDRGLQPTVVTFNVLMNGLCMSGKLEDGERLLKWML 452
Query: 264 RAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVD 323
G+ P+ +Y ++ Y + ++ M GV P YNIL+ + +
Sbjct: 453 EKGIMPNAATYNSIMKQYCIRNNMRISTEIYRGMCAQGVVPDSNTYNILIKGHCKARNMK 512
Query: 324 QARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLI 383
+A + K M R + SY ++ + + A + F ++++G V + Y +
Sbjct: 513 EAWFLHKEMVEKRFNLTASSYNALIKGFFKRKKLLEARQLFEEMRREGLVASAEIYNLFV 572
Query: 384 KGYAKVNNLEKMMEIYDK 401
+ N+E +E+ D+
Sbjct: 573 DMNYEEGNMETTLELCDE 590
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/227 (24%), Positives = 104/227 (45%), Gaps = 1/227 (0%)
Query: 254 EVSKIYDQMQRAGLQPDVVSYALLINAYGKAR-REEEALAVFEEMLDAGVRPTHKAYNIL 312
E K +D++ G+ S L + R L VF E GV ++YNIL
Sbjct: 57 EARKFFDKLLNYGVALSAGSCNLYLTCLSSKRDMLGMVLKVFSEFPQLGVCWNTESYNIL 116
Query: 313 LDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGF 372
+++ G + +A + M C PD+ SYTT++ Y + +++ + + ++ G
Sbjct: 117 MNSLFRLGKIREAHHLLMRMEFKGCIPDVVSYTTIIDGYCHVGELQKVVQLVKEMQLKGL 176
Query: 373 VPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVV 432
PN+ TY ++I K + + ++ +M G+ P+ I+TT++D + K + +A
Sbjct: 177 KPNLYTYSSIILLLCKSGKVVEGEKVLREMMKRGVFPDHVIYTTLIDGFCKLGNTQAAYK 236
Query: 433 WYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEP 479
+ EME+ PD A + L+ + + EA++L EP
Sbjct: 237 LFSEMEAREIVPDSIAFSALICGLSGSGKVVEADKLFNEMIKKGFEP 283
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 55/255 (21%), Positives = 116/255 (45%), Gaps = 4/255 (1%)
Query: 203 DQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKE----VSKI 258
D +F + + +AG +ARK F + GV S + N ++ ++ ++ V K+
Sbjct: 38 DPHVFDVFFQVLVEAGLLNEARKFFDKLLNYGVALSAGSCNLYLTCLSSKRDMLGMVLKV 97
Query: 259 YDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAI 318
+ + + G+ + SY +L+N+ + + EA + M G P +Y ++D +
Sbjct: 98 FSEFPQLGVCWNTESYNILMNSLFRLGKIREAHHLLMRMEFKGCIPDVVSYTTIIDGYCH 157
Query: 319 SGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVIT 378
G + + + K M+ P++ +Y++++ + + EK R + + G P+ +
Sbjct: 158 VGELQKVVQLVKEMQLKGLKPNLYTYSSIILLLCKSGKVVEGEKVLREMMKRGVFPDHVI 217
Query: 379 YGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEME 438
Y TLI G+ K+ N + +++ +M I P+ F+ ++ + A + EM
Sbjct: 218 YTTLIDGFCKLGNTQAAYKLFSEMEAREIVPDSIAFSALICGLSGSGKVVEADKLFNEMI 277
Query: 439 SCGFPPDQKAKNILL 453
GF PD+ L+
Sbjct: 278 KKGFEPDEVTYTALI 292
>gi|357130059|ref|XP_003566674.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
distachyon]
Length = 833
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 95/356 (26%), Positives = 166/356 (46%), Gaps = 7/356 (1%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
+I A K +KAE VL M G+ P+ V++ ++ Y G++K +FR M S G
Sbjct: 268 IIDALCKARAMDKAELVLRQMISNGFQPNKVTYNCMIHGYSISGQWKETAGMFREMTSQG 327
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
P+ +T + + K KEA E F ++ + KP+ + ++++ Y G +
Sbjct: 328 LMPNIVTCNSYMSSLCKHGKSKEAAEFFDSMAAKGH---KPNLVTYSVLLHGYATEGCFV 384
Query: 222 KARKLFALMAERGVQQSTVTYNSLMSF---ETNYKEVSKIYDQMQRAGLQPDVVSYALLI 278
LF M G+ +N ++ E I+ QMQ G+ PD +Y ++I
Sbjct: 385 DMLNLFNSMEGNGIVADQRVFNIVIDAYGKRGMMDETMLIFTQMQEQGVIPDACTYGIVI 444
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISG-MVDQARTVFKCMRRDRC 337
A+ + R +A+ F +M+ G++P Y+ L+ F + G +V V + M R
Sbjct: 445 AAFSRMGRLADAMDKFNQMIAMGLKPEGIVYHSLIQGFCMHGNLVKAKELVSEMMSRGIP 504
Query: 338 SPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMME 397
P+I + +++++ + A F + G P+VIT+ +LI GY V +EK
Sbjct: 505 RPNIVFFNSIINSLCKEGRVVEAHDIFDFVIHIGERPDVITFNSLIDGYGLVGKIEKAFG 564
Query: 398 IYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILL 453
+ D M GI+P+ + T++D Y +N D ++ + EM S G P I+L
Sbjct: 565 VLDAMISAGIEPDVVSYNTLIDGYCRNGRIDDGLILFGEMLSKGVKPTTITYGIIL 620
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 89/350 (25%), Positives = 172/350 (49%), Gaps = 11/350 (3%)
Query: 129 PSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEV 188
P+V ++ LM+ R R A+F R +G + + I+LK A + + +
Sbjct: 117 PTVCTYNILMDCCCRTRRPTVGFALFGRFLKTGLKMDVIVASILLKCLYHAKRSDDVVNL 176
Query: 189 FMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAER--GVQQSTVTYNSLM 246
+ + E ++PD ++ ++ + ++A L M ++ G + VTYN+++
Sbjct: 177 LLHRMPELG--VEPDTISYNTVVKTLCEDSRSQRALDLLHTMVKKSGGCSPNVVTYNTVI 234
Query: 247 SFETNYKEVSK---IYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVR 303
EVSK ++ +M + G+ PDVV+Y +I+A KAR ++A V +M+ G +
Sbjct: 235 HGLFREGEVSKACNLFHEMMQQGVVPDVVTYTSIIDALCKARAMDKAELVLRQMISNGFQ 294
Query: 304 PTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKF 363
P YN ++ ++ISG + +F+ M P+I + + +S+ + A +F
Sbjct: 295 PNKVTYNCMIHGYSISGQWKETAGMFREMTSQGLMPNIVTCNSYMSSLCKHGKSKEAAEF 354
Query: 364 FRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGK 423
F + G PN++TY L+ GYA M+ +++ M NGI +Q +F ++DAYGK
Sbjct: 355 FDSMAAKGHKPNLVTYSVLLHGYATEGCFVDMLNLFNSMEGNGIVADQRVFNIVIDAYGK 414
Query: 424 NKDFDSAVVWYKEMESCGFPPDQKAKNILLS----LAKTADERNEANELL 469
D ++ + +M+ G PD I+++ + + AD ++ N+++
Sbjct: 415 RGMMDETMLIFTQMQEQGVIPDACTYGIVIAAFSRMGRLADAMDKFNQMI 464
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 86/316 (27%), Positives = 158/316 (50%), Gaps = 9/316 (2%)
Query: 114 KAEKVLSFMNKK--GYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQI 171
+A +L M KK G +P+VV++ ++ R G A +F M G P +TY
Sbjct: 208 RALDLLHTMVKKSGGCSPNVVTYNTVIHGLFREGEVSKACNLFHEMMQQGVVPDVVTYTS 267
Query: 172 ILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMA 231
I+ +A +AE V ++ + +P++ ++ MI+ Y +G +++ +F M
Sbjct: 268 IIDALCKARAMDKAELVLRQMIS---NGFQPNKVTYNCMIHGYSISGQWKETAGMFREMT 324
Query: 232 ERGVQQSTVTYNSLMSFETNY---KEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREE 288
+G+ + VT NS MS + KE ++ +D M G +P++V+Y++L++ Y
Sbjct: 325 SQGLMPNIVTCNSYMSSLCKHGKSKEAAEFFDSMAAKGHKPNLVTYSVLLHGYATEGCFV 384
Query: 289 EALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTML 348
+ L +F M G+ + +NI++DA+ GM+D+ +F M+ PD C+Y ++
Sbjct: 385 DMLNLFNSMEGNGIVADQRVFNIVIDAYGKRGMMDETMLIFTQMQEQGVIPDACTYGIVI 444
Query: 349 SAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGI- 407
+A+ + A F ++ G P I Y +LI+G+ NL K E+ +M GI
Sbjct: 445 AAFSRMGRLADAMDKFNQMIAMGLKPEGIVYHSLIQGFCMHGNLVKAKELVSEMMSRGIP 504
Query: 408 KPNQTIFTTIMDAYGK 423
+PN F +I+++ K
Sbjct: 505 RPNIVFFNSIINSLCK 520
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 89/364 (24%), Positives = 166/364 (45%), Gaps = 9/364 (2%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + + +L+ Y +G F + + M G +++AYG+ G IF
Sbjct: 366 NLVTYSVLLHGYATEGCFVDMLNLFNSMEGNGIVADQRVFNIVIDAYGKRGMMDETMLIF 425
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
+MQ G P A TY I++ F + +A + F ++ LKP+ ++H +I +
Sbjct: 426 TQMQEQGVIPDACTYGIVIAAFSRMGRLADAMDKFNQMI---AMGLKPEGIVYHSLIQGF 482
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTY-----NSLMSFETNYKEVSKIYDQMQRAGLQP 269
G KA++L + M RG+ + + + NSL E E I+D + G +P
Sbjct: 483 CMHGNLVKAKELVSEMMSRGIPRPNIVFFNSIINSLCK-EGRVVEAHDIFDFVIHIGERP 541
Query: 270 DVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVF 329
DV+++ LI+ YG + E+A V + M+ AG+ P +YN L+D + +G +D +F
Sbjct: 542 DVITFNSLIDGYGLVGKIEKAFGVLDAMISAGIEPDVVSYNTLIDGYCRNGRIDDGLILF 601
Query: 330 KCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKV 389
M P +Y +L N GA+K + + G ++ T G ++ G +
Sbjct: 602 GEMLSKGVKPTTITYGIILHGLFNDGRTVGAKKMCHEMIESGTTMDISTCGIILGGLCRN 661
Query: 390 NNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAK 449
N ++ + ++ K+ +K N I T++DA K + + A + + + G P+
Sbjct: 662 NCDDEAIAMFKKLGAMNVKFNIAIINTMIDAMYKVRKREEAKELFDSISATGLVPNASTY 721
Query: 450 NILL 453
+++
Sbjct: 722 GVMI 725
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 92/361 (25%), Positives = 165/361 (45%), Gaps = 11/361 (3%)
Query: 99 FLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQ 158
F ++I AYGK+G ++ + + M ++G P ++ ++ A+ R GR +A F +M
Sbjct: 405 FNIVIDAYGKRGMMDETMLIFTQMQEQGVIPDACTYGIVIAAFSRMGRLADAMDKFNQMI 464
Query: 159 SSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAG 218
+ G +P + Y +++ F +A+E+ ++ + +P+ F+ +I K G
Sbjct: 465 AMGLKPEGIVYHSLIQGFCMHGNLVKAKELVSEMM--SRGIPRPNIVFFNSIINSLCKEG 522
Query: 219 GYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSKI------YDQMQRAGLQPDVV 272
+A +F + G + +T+NSL+ Y V KI D M AG++PDVV
Sbjct: 523 RVVEAHDIFDFVIHIGERPDVITFNSLID---GYGLVGKIEKAFGVLDAMISAGIEPDVV 579
Query: 273 SYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCM 332
SY LI+ Y + R ++ L +F EML GV+PT Y I+L G A+ + M
Sbjct: 580 SYNTLIDGYCRNGRIDDGLILFGEMLSKGVKPTTITYGIILHGLFNDGRTVGAKKMCHEM 639
Query: 333 RRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNL 392
+ DI + +L + + A F++L N+ T+I KV
Sbjct: 640 IESGTTMDISTCGIILGGLCRNNCDDEAIAMFKKLGAMNVKFNIAIINTMIDAMYKVRKR 699
Query: 393 EKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNIL 452
E+ E++D + G+ PN + + ++ K + A + ME G P + N +
Sbjct: 700 EEAKELFDSISATGLVPNASTYGVMIKNLLKEGSVEEADNMFSLMEKSGCAPSSRLLNYI 759
Query: 453 L 453
+
Sbjct: 760 I 760
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 66/280 (23%), Positives = 124/280 (44%), Gaps = 14/280 (5%)
Query: 53 TRGQPLPKDLVLGTLVRLKQLKKWNVV--SEVLEWLRIQSWWDFNEMDFLMLITAYGKQG 110
+RG P P + +++ K+ VV ++ +++ I + + F LI YG G
Sbjct: 500 SRGIPRPNIVFFNSIIN-SLCKEGRVVEAHDIFDFV-IHIGERPDVITFNSLIDGYGLVG 557
Query: 111 DFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQ 170
KA VL M G P VVS+ L++ Y R GR + +F M S G +P+ +TY
Sbjct: 558 KIEKAFGVLDAMISAGIEPDVVSYNTLIDGYCRNGRIDDGLILFGEMLSKGVKPTTITYG 617
Query: 171 IILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALM 230
IIL + A+++ +++ S D +++ + ++A +F +
Sbjct: 618 IILHGLFNDGRTVGAKKMCHEMIE---SGTTMDISTCGIILGGLCRNNCDDEAIAMFKKL 674
Query: 231 AERGVQQSTVTYNSLMSFETNYK-----EVSKIYDQMQRAGLQPDVVSYALLINAYGKAR 285
V+ + N+++ + YK E +++D + GL P+ +Y ++I K
Sbjct: 675 GAMNVKFNIAIINTMI--DAMYKVRKREEAKELFDSISATGLVPNASTYGVMIKNLLKEG 732
Query: 286 REEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQA 325
EEA +F M +G P+ + N ++ G + +A
Sbjct: 733 SVEEADNMFSLMEKSGCAPSSRLLNYIIRVLLEKGEIVKA 772
>gi|32527606|gb|AAP86200.1| pentatricopeptide repeat-containing protein [Raphanus sativus]
Length = 654
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 113/458 (24%), Positives = 198/458 (43%), Gaps = 38/458 (8%)
Query: 48 LRSERTRGQPLPKDL----VLGTLVRLKQLKKWNVVSEVLEWLRIQSWWDFNEMDFLMLI 103
L + R +PLP + ++G +VR+ +L + +E R+ N F +L+
Sbjct: 65 LFGDMVRSRPLPSVIDFCKLMGVVVRMGRLDVVISLHRKMEMRRVPC----NAYSFTILM 120
Query: 104 TAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPR 163
+ A + K G+ P+VV+ + L+ R A +F +M +
Sbjct: 121 KCFCSCSKLPFALSTFGKITKLGFHPTVVTFSTLLHGLCVEDRISEALDLFHQM----CK 176
Query: 164 PSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKA 223
P+ +T+ ++ + EA + +L++ L+P+Q + ++ K G A
Sbjct: 177 PNVVTFTTLMNGLCREGRVVEAVALLDRMLED---GLQPNQITYGTIVDGMCKMGDTVSA 233
Query: 224 RKLFALMAERG----------VQQSTVTYNSLMSFETNYKEVSKIYDQM-QRAGLQPDVV 272
L M E +++ T N S + E ++ +M +R + PDVV
Sbjct: 234 LNLLRKMEEVSHIKPNVVIWPLERRTCMINGFCS-SGRWSEAQQLLQEMLERKKISPDVV 292
Query: 273 SYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCM 332
+Y LINA+ K + EA +++EML G+ P+ Y+ ++D F +D A +F M
Sbjct: 293 TYNALINAFVKEGKFFEAEELYDEMLPRGIIPSTITYSSMIDGFCKQNRLDAAEHMFYLM 352
Query: 333 RRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNL 392
CSPDI ++ T+++ Y A ++ K + + G V N ITY TLI G+ +V +L
Sbjct: 353 ATKGCSPDIITFNTLIAGYCRAKRVDDGIKLLHEMTEAGLVANTITYTTLIHGFCQVGDL 412
Query: 393 EKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESC-----------G 441
++ +M +G+ PN T++D N A+ +K M+ G
Sbjct: 413 NAAQDLLQEMVSSGVCPNVVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDIDASHPFNG 472
Query: 442 FPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEP 479
PD + NIL+S + EA EL H P
Sbjct: 473 VEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVP 510
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 97/370 (26%), Positives = 184/370 (49%), Gaps = 19/370 (5%)
Query: 102 LITAYGKQGDFNKAEKVLS-FMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSS 160
+I + G +++A+++L + +K +P VV++ AL+ A+ + G++ AE ++ M
Sbjct: 261 MINGFCSSGRWSEAQQLLQEMLERKKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPR 320
Query: 161 GPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGY 220
G PS +TY ++ F + N+ AE +F + + SP D F+ +I Y +A
Sbjct: 321 GIIPSTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSP---DIITFNTLIAGYCRAKRV 377
Query: 221 EKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSKIYDQMQR---AGLQPDVVSYALL 277
+ KL M E G+ +T+TY +L+ +++ D +Q +G+ P+VV+ L
Sbjct: 378 DDGIKLLHEMTEAGLVANTITYTTLIHGFCQVGDLNAAQDLLQEMVSSGVCPNVVTCNTL 437
Query: 278 INAYGKARREEEALAVFEEM------LDA-----GVRPTHKAYNILLDAFAISGMVDQAR 326
++ + ++AL +F+ M +DA GV P + YNIL+ G +A
Sbjct: 438 LDGLCDNGKLKDALEMFKAMQKSKMDIDASHPFNGVEPDVQTYNILISGLINEGKFLEAE 497
Query: 327 TVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGY 386
+++ M PD +Y +++ S ++ A + F + F PNV+T+ TLI GY
Sbjct: 498 ELYEEMPHRGIVPDTITYNSVIHGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGY 557
Query: 387 AKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQ 446
K ++ +E++ +M GI N + T++ + K + + A+ ++EM + G PD
Sbjct: 558 CKAGRVDDGLELFCEMGRRGIVANAITYITLIHGFRKVGNINGALDIFQEMMASGVYPDT 617
Query: 447 -KAKNILLSL 455
+N+L L
Sbjct: 618 ITIRNMLTGL 627
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 87/379 (22%), Positives = 185/379 (48%), Gaps = 19/379 (5%)
Query: 75 KWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSH 134
+W+ ++L+ + + + + + LI A+ K+G F +AE++ M +G PS +++
Sbjct: 270 RWSEAQQLLQEMLERKKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPSTITY 329
Query: 135 TALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLD 194
+++++ + + R AE +F M + G P +T+ ++ + A + + + LL
Sbjct: 330 SSMIDGFCKQNRLDAAEHMFYLMATKGCSPDIITFNTLIAGYCRAKRVDDG----IKLLH 385
Query: 195 E-EKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETN-- 251
E ++ L + + +I+ + + G A+ L M GV + VT N+L+ +
Sbjct: 386 EMTEAGLVANTITYTTLIHGFCQVGDLNAAQDLLQEMVSSGVCPNVVTCNTLLDGLCDNG 445
Query: 252 -YKEVSKIYDQMQRA-----------GLQPDVVSYALLINAYGKARREEEALAVFEEMLD 299
K+ +++ MQ++ G++PDV +Y +LI+ + EA ++EEM
Sbjct: 446 KLKDALEMFKAMQKSKMDIDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPH 505
Query: 300 AGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEG 359
G+ P YN ++ +D+A +F M SP++ ++TT+++ Y A ++
Sbjct: 506 RGIVPDTITYNSVIHGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDD 565
Query: 360 AEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMD 419
+ F + + G V N ITY TLI G+ KV N+ ++I+ +M +G+ P+ ++
Sbjct: 566 GLELFCEMGRRGIVANAITYITLIHGFRKVGNINGALDIFQEMMASGVYPDTITIRNMLT 625
Query: 420 AYGKNKDFDSAVVWYKEME 438
++ AV ++++
Sbjct: 626 GLWSKEELKRAVAMLEDLQ 644
Score = 101 bits (252), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 66/318 (20%), Positives = 139/318 (43%), Gaps = 17/318 (5%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
+I + KQ + AE + M KG +P +++ L+ Y R R + + M +G
Sbjct: 332 MIDGFCKQNRLDAAEHMFYLMATKGCSPDIITFNTLIAGYCRAKRVDDGIKLLHEMTEAG 391
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
+ +TY ++ F + A+++ ++ S + P+ + ++ G +
Sbjct: 392 LVANTITYTTLIHGFCQVGDLNAAQDLLQEMVS---SGVCPNVVTCNTLLDGLCDNGKLK 448
Query: 222 KARKLFALMAER-----------GVQQSTVTYNSLMSFETN---YKEVSKIYDQMQRAGL 267
A ++F M + GV+ TYN L+S N + E ++Y++M G+
Sbjct: 449 DALEMFKAMQKSKMDIDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGI 508
Query: 268 QPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQART 327
PD ++Y +I+ K R +EA +F+ M P + L++ + +G VD
Sbjct: 509 VPDTITYNSVIHGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLE 568
Query: 328 VFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYA 387
+F M R + +Y T++ + ++ GA F+ + G P+ IT ++ G
Sbjct: 569 LFCEMGRRGIVANAITYITLIHGFRKVGNINGALDIFQEMMASGVYPDTITIRNMLTGLW 628
Query: 388 KVNNLEKMMEIYDKMRVN 405
L++ + + + ++++
Sbjct: 629 SKEELKRAVAMLEDLQMS 646
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 41/182 (22%), Positives = 83/182 (45%), Gaps = 5/182 (2%)
Query: 288 EEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTM 347
E+A+ +F +M+ + P+ + L+ G +D ++ + M R + S+T +
Sbjct: 60 EDAIDLFGDMVRSRPLPSVIDFCKLMGVVVRMGRLDVVISLHRKMEMRRVPCNAYSFTIL 119
Query: 348 LSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGI 407
+ + + S + A F ++ + GF P V+T+ TL+ G + + + ++++ +M
Sbjct: 120 MKCFCSCSKLPFALSTFGKITKLGFHPTVVTFSTLLHGLCVEDRISEALDLFHQM----C 175
Query: 408 KPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILL-SLAKTADERNEAN 466
KPN FTT+M+ + AV M G P+Q ++ + K D + N
Sbjct: 176 KPNVVTFTTLMNGLCREGRVVEAVALLDRMLEDGLQPNQITYGTIVDGMCKMGDTVSALN 235
Query: 467 EL 468
L
Sbjct: 236 LL 237
>gi|410110077|gb|AFV61118.1| pentatricopeptide repeat-containing protein 123, partial
[Coelocarpum swinglei]
Length = 440
Score = 149 bits (375), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 101/388 (26%), Positives = 188/388 (48%), Gaps = 37/388 (9%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
LI K D++KA + S + + G+ P +V++ A++ +G+ +++A ++ M+++G
Sbjct: 56 LIELSRKLCDYSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFRDARSLISEMRTAG 115
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
P+A +Y +L ++VE KF EA VF + E K L D ++MI +Y + G +
Sbjct: 116 VMPNASSYSALLTMYVENKKFLEALSVFAE-MREIKCLL--DLTTCNIMIDVYGQLGMAK 172
Query: 222 KARKLFALMAERGVQQSTVTYNSLMSFETN---YKEVSKIYDQMQRAGLQPDVVSYALLI 278
+A KLF M + G++ + V+YN+L+ + + E ++ MQR ++ +VV+Y ++
Sbjct: 173 EADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMM 232
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCS 338
YGK E+A + +EM + G+ P Y+ ++ + G +D+A +F+ +R
Sbjct: 233 MIYGKTLEHEKANNLIQEMQNRGIEPNSITYSTIISIWGKIGKLDRAAMLFQKLRTSGVE 292
Query: 339 PDICSYTTMLSAY-------------------------------VNASDMEGAEKFFRRL 367
D + TM+ AY A +E A FR+
Sbjct: 293 IDQILFQTMIXAYERAGLVAHAKRLLHELKRPDNIPRDTAIHILAGAGRIEEATYVFRQA 352
Query: 368 KQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDF 427
G V ++ + +I ++K ++E++DKM G P+ + +++AYGK +F
Sbjct: 353 IDAGEVKDITVFERMIHLFSKYKKYANVVEVFDKMYGLGYFPDSNVIALVLNAYGKLHEF 412
Query: 428 DSAVVWYKEMESCGFPPDQKAKNILLSL 455
D A Y EM+ G + +LSL
Sbjct: 413 DKANEVYMEMQDVGCVFSDEVHFQMLSL 440
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 83/331 (25%), Positives = 158/331 (47%), Gaps = 6/331 (1%)
Query: 152 AIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMI 211
+F M+ P TY ++ F + F +A ++ +++++ P D ++ +I
Sbjct: 1 GLFDEMREKALSPDRYTYSTLITHFGKEGLF-DAALSWLQKMEQDRVP--GDLVLYSNLI 57
Query: 212 YMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSF---ETNYKEVSKIYDQMQRAGLQ 268
+ +K Y KA +F+ + G V YN++++ +++ + +M+ AG+
Sbjct: 58 ELSRKLCDYSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFRDARSLISEMRTAGVM 117
Query: 269 PDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTV 328
P+ SY+ L+ Y + ++ EAL+VF EM + NI++D + GM +A +
Sbjct: 118 PNASSYSALLTMYVENKKFLEALSVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKL 177
Query: 329 FKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAK 388
F MR+ P++ SY T+L Y +A A FR +++ NV+TY +++ Y K
Sbjct: 178 FWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGK 237
Query: 389 VNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKA 448
EK + +M+ GI+PN ++TI+ +GK D A + ++++ + G DQ
Sbjct: 238 TLEHEKANNLIQEMQNRGIEPNSITYSTIISIWGKIGKLDRAAMLFQKLRTSGVEIDQIL 297
Query: 449 KNILLSLAKTADERNEANELLGNFNHPNNEP 479
++ + A A LL P+N P
Sbjct: 298 FQTMIXAYERAGLVAHAKRLLHELKRPDNIP 328
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 72/303 (23%), Positives = 152/303 (50%), Gaps = 6/303 (1%)
Query: 122 MNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANK 181
M +K +P +++ L+ +G+ G + A + ++M+ + Y +++L +
Sbjct: 6 MREKALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCD 65
Query: 182 FKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVT 241
+ +A +F L ++S PD ++ MI ++ KA + AR L + M GV + +
Sbjct: 66 YSKAISIFSRL---KRSGFTPDLVAYNAMINVFGKAKLFRDARSLISEMRTAGVMPNASS 122
Query: 242 YNSLMSFETNYK---EVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEML 298
Y++L++ K E ++ +M+ D+ + ++I+ YG+ +EA +F M
Sbjct: 123 YSALLTMYVENKKFLEALSVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMR 182
Query: 299 DAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDME 358
G+ P +YN LL + + + +A +F+ M+R ++ +Y +M+ Y + E
Sbjct: 183 KMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHE 242
Query: 359 GAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIM 418
A + ++ G PN ITY T+I + K+ L++ ++ K+R +G++ +Q +F T++
Sbjct: 243 KANNLIQEMQNRGIEPNSITYSTIISIWGKIGKLDRAAMLFQKLRTSGVEIDQILFQTMI 302
Query: 419 DAY 421
AY
Sbjct: 303 XAY 305
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 84/190 (44%)
Query: 292 AVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAY 351
+F+EM + + P Y+ L+ F G+ D A + + M +DR D+ Y+ ++
Sbjct: 1 GLFDEMREKALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELS 60
Query: 352 VNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQ 411
D A F RLK+ GF P+++ Y +I + K + +MR G+ PN
Sbjct: 61 RKLCDYSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFRDARSLISEMRTAGVMPNA 120
Query: 412 TIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGN 471
+ ++ ++ Y +NK F A+ + EM D NI++ + EA++L
Sbjct: 121 SSYSALLTMYVENKKFLEALSVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWG 180
Query: 472 FNHPNNEPGI 481
EP +
Sbjct: 181 MRKMGIEPNV 190
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/244 (23%), Positives = 116/244 (47%), Gaps = 6/244 (2%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + + L+ YG F +A + M +K +VV++ ++M YG+ ++ A +
Sbjct: 189 NVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLI 248
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
+ MQ+ G P+++TY I+ ++ + K A +F L S ++ DQ +F MI Y
Sbjct: 249 QEMQNRGIEPNSITYSTIISIWGKIGKLDRAAMLFQKL---RTSGVEIDQILFQTMIXAY 305
Query: 215 KKAGGYEKARKLFA-LMAERGVQQSTVTYNSLMSFETNYKEVSKIYDQMQRAGLQPDVVS 273
++AG A++L L + + T + +++ +E + ++ Q AG D+
Sbjct: 306 ERAGLVAHAKRLLHELKRPDNIPRDTAIH--ILAGAGRIEEATYVFRQAIDAGEVKDITV 363
Query: 274 YALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMR 333
+ +I+ + K ++ + VF++M G P ++L+A+ D+A V+ M+
Sbjct: 364 FERMIHLFSKYKKYANVVEVFDKMYGLGYFPDSNVIALVLNAYGKLHEFDKANEVYMEMQ 423
Query: 334 RDRC 337
C
Sbjct: 424 DVGC 427
Score = 41.2 bits (95), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 24/123 (19%), Positives = 52/123 (42%)
Query: 363 FFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYG 422
F +++ P+ TY TLI + K + + KM + + + +++ +++
Sbjct: 2 LFDEMREKALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSR 61
Query: 423 KNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGIN 482
K D+ A+ + ++ GF PD A N ++++ A +A L+ P +
Sbjct: 62 KLCDYSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFRDARSLISEMRTAGVMPNAS 121
Query: 483 GLS 485
S
Sbjct: 122 SYS 124
>gi|357130063|ref|XP_003566676.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
distachyon]
Length = 822
Score = 149 bits (375), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 92/316 (29%), Positives = 157/316 (49%), Gaps = 9/316 (2%)
Query: 114 KAEKVLSFMNKK--GYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQI 171
+A +L M KK G +P+VVS+ ++ + R G A +F M G P +TY
Sbjct: 208 RALDLLHTMVKKSGGCSPNVVSYNTVIHGFFREGEVSKACNLFHEMMQQGVVPDVVTYSS 267
Query: 172 ILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMA 231
+ +A +AE V ++ + +PD+ ++ MI+ Y G +++ +F M
Sbjct: 268 YIDALCKARAMDKAELVLRQMIS---NGFEPDKVTYNCMIHGYSILGQWKETAGMFREMT 324
Query: 232 ERGVQQSTVTYNSLMSFETNY---KEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREE 288
RG+ T NS MS + KE ++ +D M G +PD+V+Y++L++ Y
Sbjct: 325 RRGLMPDIFTCNSYMSSLCKHGKSKEAAEFFDSMAAKGHKPDLVTYSVLLHGYAAEGYVV 384
Query: 289 EALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTML 348
+ L +F M G+ H YNIL+DA+ GM+D+A +F M+ PD +Y T++
Sbjct: 385 DMLNLFNSMEGNGIVADHSVYNILIDAYGKRGMMDEAMLIFTQMQERGVMPDAWTYGTVI 444
Query: 349 SAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGI- 407
+A+ + A F ++ G P+ I Y +LI+G+ NL K E+ +M GI
Sbjct: 445 AAFSRMGRLADAMDKFNQMIAMGLKPDTIVYNSLIQGFCMHGNLVKAKELISEMMSRGIP 504
Query: 408 KPNQTIFTTIMDAYGK 423
+PN F +I+++ K
Sbjct: 505 RPNTVFFNSIINSLCK 520
Score = 141 bits (356), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 88/351 (25%), Positives = 172/351 (49%), Gaps = 11/351 (3%)
Query: 129 PSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEV 188
P+V ++ LM+ R R A+F R +G + + I+LK A + +A V
Sbjct: 117 PTVCTYNILMDCCCRAHRPTVGFALFGRFLKTGLKTDVIVANILLKCLCHAKRSDDAVNV 176
Query: 189 FMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAER--GVQQSTVTYNSLM 246
+ + E ++PD + ++ + ++A L M ++ G + V+YN+++
Sbjct: 177 LLHRMPELG--VEPDTISYSTVLKSLCEDSRSQRALDLLHTMVKKSGGCSPNVVSYNTVI 234
Query: 247 SFETNYKEVSK---IYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVR 303
EVSK ++ +M + G+ PDVV+Y+ I+A KAR ++A V +M+ G
Sbjct: 235 HGFFREGEVSKACNLFHEMMQQGVVPDVVTYSSYIDALCKARAMDKAELVLRQMISNGFE 294
Query: 304 PTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKF 363
P YN ++ ++I G + +F+ M R PDI + + +S+ + A +F
Sbjct: 295 PDKVTYNCMIHGYSILGQWKETAGMFREMTRRGLMPDIFTCNSYMSSLCKHGKSKEAAEF 354
Query: 364 FRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGK 423
F + G P+++TY L+ GYA + M+ +++ M NGI + +++ ++DAYGK
Sbjct: 355 FDSMAAKGHKPDLVTYSVLLHGYAAEGYVVDMLNLFNSMEGNGIVADHSVYNILIDAYGK 414
Query: 424 NKDFDSAVVWYKEMESCGFPPDQKAKNILLS----LAKTADERNEANELLG 470
D A++ + +M+ G PD +++ + + AD ++ N+++
Sbjct: 415 RGMMDEAMLIFTQMQERGVMPDAWTYGTVIAAFSRMGRLADAMDKFNQMIA 465
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 99/400 (24%), Positives = 181/400 (45%), Gaps = 46/400 (11%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + + +I + ++G+ +KA + M ++G P VV++++ ++A + AE +
Sbjct: 226 NVVSYNTVIHGFFREGEVSKACNLFHEMMQQGVVPDVVTYSSYIDALCKARAMDKAELVL 285
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
R+M S+G P +TY ++ + ++KE +F + + L PD +F YM
Sbjct: 286 RQMISNGFEPDKVTYNCMIHGYSILGQWKETAGMFREM---TRRGLMPD--IFTCNSYMS 340
Query: 215 K--KAGGYEKARKLFALMAERGVQQSTVTYNSLM-----------------SFETN---- 251
K G ++A + F MA +G + VTY+ L+ S E N
Sbjct: 341 SLCKHGKSKEAAEFFDSMAAKGHKPDLVTYSVLLHGYAAEGYVVDMLNLFNSMEGNGIVA 400
Query: 252 -----------------YKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVF 294
E I+ QMQ G+ PD +Y +I A+ + R +A+ F
Sbjct: 401 DHSVYNILIDAYGKRGMMDEAMLIFTQMQERGVMPDAWTYGTVIAAFSRMGRLADAMDKF 460
Query: 295 EEMLDAGVRPTHKAYNILLDAFAISG-MVDQARTVFKCMRRDRCSPDICSYTTMLSAYVN 353
+M+ G++P YN L+ F + G +V + + M R P+ + +++++
Sbjct: 461 NQMIAMGLKPDTIVYNSLIQGFCMHGNLVKAKELISEMMSRGIPRPNTVFFNSIINSLCK 520
Query: 354 ASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTI 413
+ A+ F + G P+VIT+ +LI GY V +EK + D M GI+P+
Sbjct: 521 EGRVVEAQDIFDLVIHIGERPDVITFNSLIDGYGLVGKMEKAFGVLDAMISVGIEPDVVT 580
Query: 414 FTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILL 453
++ ++D Y +N D ++ ++EM S G P I+L
Sbjct: 581 YSALLDGYCRNGRIDDGLILFREMLSKGVKPTTITYGIIL 620
Score = 135 bits (340), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 88/358 (24%), Positives = 167/358 (46%), Gaps = 7/358 (1%)
Query: 101 MLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSS 160
+L+ Y +G + + M G + L++AYG+ G A IF +MQ
Sbjct: 372 VLLHGYAAEGYVVDMLNLFNSMEGNGIVADHSVYNILIDAYGKRGMMDEAMLIFTQMQER 431
Query: 161 GPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGY 220
G P A TY ++ F + +A + F ++ LKPD +++ +I + G
Sbjct: 432 GVMPDAWTYGTVIAAFSRMGRLADAMDKFNQMI---AMGLKPDTIVYNSLIQGFCMHGNL 488
Query: 221 EKARKLFALMAERGVQQ-STVTYNSLMSF---ETNYKEVSKIYDQMQRAGLQPDVVSYAL 276
KA++L + M RG+ + +TV +NS+++ E E I+D + G +PDV+++
Sbjct: 489 VKAKELISEMMSRGIPRPNTVFFNSIINSLCKEGRVVEAQDIFDLVIHIGERPDVITFNS 548
Query: 277 LINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDR 336
LI+ YG + E+A V + M+ G+ P Y+ LLD + +G +D +F+ M
Sbjct: 549 LIDGYGLVGKMEKAFGVLDAMISVGIEPDVVTYSALLDGYCRNGRIDDGLILFREMLSKG 608
Query: 337 CSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMM 396
P +Y +L N GA+K + + G ++ T G ++ G + N ++ +
Sbjct: 609 VKPTTITYGIILHGLFNDGRTVGAKKMCHEMIESGTTMDISTCGIILGGLCRNNCDDEAI 668
Query: 397 EIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLS 454
++ K+ +K N I T++DA K + + A + + + G P+ ++++
Sbjct: 669 ALFKKLGAMNVKFNIAIINTMIDAMYKVRKREEANELFDSISATGLVPNASTYGVMIT 726
Score = 132 bits (331), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 93/375 (24%), Positives = 173/375 (46%), Gaps = 11/375 (2%)
Query: 101 MLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSS 160
+LI AYGK+G ++A + + M ++G P ++ ++ A+ R GR +A F +M +
Sbjct: 407 ILIDAYGKRGMMDEAMLIFTQMQERGVMPDAWTYGTVIAAFSRMGRLADAMDKFNQMIAM 466
Query: 161 GPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGY 220
G +P + Y +++ F +A+E+ ++ + +P+ F+ +I K G
Sbjct: 467 GLKPDTIVYNSLIQGFCMHGNLVKAKELISEMM--SRGIPRPNTVFFNSIINSLCKEGRV 524
Query: 221 EKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSK------IYDQMQRAGLQPDVVSY 274
+A+ +F L+ G + +T+NSL+ Y V K + D M G++PDVV+Y
Sbjct: 525 VEAQDIFDLVIHIGERPDVITFNSLID---GYGLVGKMEKAFGVLDAMISVGIEPDVVTY 581
Query: 275 ALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRR 334
+ L++ Y + R ++ L +F EML GV+PT Y I+L G A+ + M
Sbjct: 582 SALLDGYCRNGRIDDGLILFREMLSKGVKPTTITYGIILHGLFNDGRTVGAKKMCHEMIE 641
Query: 335 DRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEK 394
+ DI + +L + + A F++L N+ T+I KV E+
Sbjct: 642 SGTTMDISTCGIILGGLCRNNCDDEAIALFKKLGAMNVKFNIAIINTMIDAMYKVRKREE 701
Query: 395 MMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLS 454
E++D + G+ PN + + ++ K + A + ME G P + N ++
Sbjct: 702 ANELFDSISATGLVPNASTYGVMITNLLKEGSVEEADNMFSLMEKSGCAPSSRLLNNIIR 761
Query: 455 LAKTADERNEANELL 469
+ E ++A L
Sbjct: 762 VLLEKGEISKAGNYL 776
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 89/380 (23%), Positives = 175/380 (46%), Gaps = 11/380 (2%)
Query: 85 WLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRG 144
+L+ D + L+ + K+ D + +L M + G P +S++ ++++
Sbjct: 145 FLKTGLKTDVIVANILLKCLCHAKRSD-DAVNVLLHRMPELGVEPDTISYSTVLKSLCED 203
Query: 145 GRYKNAEAIFRRM--QSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKP 202
R + A + M +S G P+ ++Y ++ F + +A +F ++ + + P
Sbjct: 204 SRSQRALDLLHTMVKKSGGCSPNVVSYNTVIHGFFREGEVSKACNLFHEMMQQG---VVP 260
Query: 203 DQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLM---SFETNYKEVSKIY 259
D + I KA +KA + M G + VTYN ++ S +KE + ++
Sbjct: 261 DVVTYSSYIDALCKARAMDKAELVLRQMISNGFEPDKVTYNCMIHGYSILGQWKETAGMF 320
Query: 260 DQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAIS 319
+M R GL PD+ + +++ K + +EA F+ M G +P Y++LL +A
Sbjct: 321 REMTRRGLMPDIFTCNSYMSSLCKHGKSKEAAEFFDSMAAKGHKPDLVTYSVLLHGYAAE 380
Query: 320 GMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITY 379
G V +F M + D Y ++ AY M+ A F ++++ G +P+ TY
Sbjct: 381 GYVVDMLNLFNSMEGNGIVADHSVYNILIDAYGKRGMMDEAMLIFTQMQERGVMPDAWTY 440
Query: 380 GTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMES 439
GT+I ++++ L M+ +++M G+KP+ ++ +++ + + + A EM S
Sbjct: 441 GTVIAAFSRMGRLADAMDKFNQMIAMGLKPDTIVYNSLIQGFCMHGNLVKAKELISEMMS 500
Query: 440 CGFP-PDQKAKN-ILLSLAK 457
G P P+ N I+ SL K
Sbjct: 501 RGIPRPNTVFFNSIINSLCK 520
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 70/280 (25%), Positives = 125/280 (44%), Gaps = 14/280 (5%)
Query: 53 TRGQPLPKDLVLGTLVRLKQLKKWNVVSEVLEW--LRIQSWWDFNEMDFLMLITAYGKQG 110
+RG P P + +++ L K V E + L I + + F LI YG G
Sbjct: 500 SRGIPRPNTVFFNSII--NSLCKEGRVVEAQDIFDLVIHIGERPDVITFNSLIDGYGLVG 557
Query: 111 DFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQ 170
KA VL M G P VV+++AL++ Y R GR + +FR M S G +P+ +TY
Sbjct: 558 KMEKAFGVLDAMISVGIEPDVVTYSALLDGYCRNGRIDDGLILFREMLSKGVKPTTITYG 617
Query: 171 IILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALM 230
IIL + A+++ +++ S D +++ + ++A LF +
Sbjct: 618 IILHGLFNDGRTVGAKKMCHEMIE---SGTTMDISTCGIILGGLCRNNCDDEAIALFKKL 674
Query: 231 AERGVQQSTVTYNSLMSFETNYK-----EVSKIYDQMQRAGLQPDVVSYALLINAYGKAR 285
V+ + N+++ + YK E ++++D + GL P+ +Y ++I K
Sbjct: 675 GAMNVKFNIAIINTMI--DAMYKVRKREEANELFDSISATGLVPNASTYGVMITNLLKEG 732
Query: 286 REEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQA 325
EEA +F M +G P+ + N ++ G + +A
Sbjct: 733 SVEEADNMFSLMEKSGCAPSSRLLNNIIRVLLEKGEISKA 772
Score = 72.4 bits (176), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 58/279 (20%), Positives = 121/279 (43%), Gaps = 15/279 (5%)
Query: 65 GTLVRLKQLKKWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNK 124
G LV+ K+L +SE++ + N + F +I + K+G +A+ + +
Sbjct: 486 GNLVKAKEL-----ISEMMS----RGIPRPNTVFFNSIINSLCKEGRVVEAQDIFDLVIH 536
Query: 125 KGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKE 184
G P V++ +L++ YG G+ + A + M S G P +TY +L + + +
Sbjct: 537 IGERPDVITFNSLIDGYGLVGKMEKAFGVLDAMISVGIEPDVVTYSALLDGYCRNGRIDD 596
Query: 185 AEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNS 244
+F +L + +KP + ++++ G A+K+ M E G T
Sbjct: 597 GLILFREMLSKG---VKPTTITYGIILHGLFNDGRTVGAKKMCHEMIESGTTMDISTCGI 653
Query: 245 LMSFETNYK---EVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAG 301
++ E ++ ++ ++ ++ +I+A K R+ EEA +F+ + G
Sbjct: 654 ILGGLCRNNCDDEAIALFKKLGAMNVKFNIAIINTMIDAMYKVRKREEANELFDSISATG 713
Query: 302 VRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPD 340
+ P Y +++ G V++A +F M + C+P
Sbjct: 714 LVPNASTYGVMITNLLKEGSVEEADNMFSLMEKSGCAPS 752
>gi|302805861|ref|XP_002984681.1| hypothetical protein SELMODRAFT_30598 [Selaginella moellendorffii]
gi|300147663|gb|EFJ14326.1| hypothetical protein SELMODRAFT_30598 [Selaginella moellendorffii]
Length = 651
Score = 149 bits (375), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 100/394 (25%), Positives = 180/394 (45%), Gaps = 25/394 (6%)
Query: 98 DFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRM 157
++ +L+ Y + GD A M P+V +T+L+ AY + A A M
Sbjct: 133 EYGLLVDFYARHGDKVAARATFEAMRASHIKPNVHIYTSLIHAYAEARDMEGAVACTEEM 192
Query: 158 QSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKA 217
S G + + + I+ + A + AE F E L P +++ ++ Y +A
Sbjct: 193 LSQGIQLNEAVFCSIISGYASAGNNEAAEHWFEKFKAEN---LVPGGIVYNSIVQAYCQA 249
Query: 218 GGYEKARKLFALMAERGVQQSTVTYNSLM-------------SF---------ETNYKEV 255
G E L A M E G Q + Y +++ SF N +
Sbjct: 250 GNMETVEALLAQMEEEGFQGNLGLYTTVLNGFAEIRDEEKCLSFFHRLKVSPQAGNMAKA 309
Query: 256 SKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDA 315
I ++M + G+ P+ + YA++++ Y + A V+E+M+ AG++P YNIL+ A
Sbjct: 310 LDILEEMDKHGVSPNKMIYAMIMDGYARGGDFTAAFKVWEDMVSAGLKPDIVIYNILVHA 369
Query: 316 FAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPN 375
F +G +D+A V + + +R P I +YT++L YV +++ A + F R+K G P
Sbjct: 370 FCKAGRMDKALGVLENIEANRLLPTIETYTSILDGYVKGGNIQKALEVFDRIKTAGLRPG 429
Query: 376 VITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYK 435
V++Y +L+ G AK +E + ++M NG+ P++ I+T + + Y + D + A ++
Sbjct: 430 VVSYNSLLSGLAKARQMENARLMLNEMLANGVVPSERIYTALTEGYARTGDVEKAFGVFQ 489
Query: 436 EMESCGFPPDQKAKNILLSLAKTADERNEANELL 469
M+ D A LL + + A E+
Sbjct: 490 RMKKENLAIDIVAYGALLKACCNSGAMHGAAEVF 523
Score = 132 bits (331), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 99/410 (24%), Positives = 178/410 (43%), Gaps = 30/410 (7%)
Query: 94 FNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAI 153
NE F +I+ Y G+ AE + P + + ++++AY + G + EA+
Sbjct: 199 LNEAVFCSIISGYASAGNNEAAEHWFEKFKAENLVPGGIVYNSIVQAYCQAGNMETVEAL 258
Query: 154 FRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYM 213
+M+ G + + Y +L F E + DEEK FH + +
Sbjct: 259 LAQMEEEGFQGNLGLYTTVLNGFAE-------------IRDEEKC-----LSFFHRL-KV 299
Query: 214 YKKAGGYEKARKLFALMAERGVQQSTVTYNSLM---SFETNYKEVSKIYDQMQRAGLQPD 270
+AG KA + M + GV + + Y +M + ++ K+++ M AGL+PD
Sbjct: 300 SPQAGNMAKALDILEEMDKHGVSPNKMIYAMIMDGYARGGDFTAAFKVWEDMVSAGLKPD 359
Query: 271 VVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFK 330
+V Y +L++A+ KA R ++AL V E + + PT + Y +LD + G + +A VF
Sbjct: 360 IVIYNILVHAFCKAGRMDKALGVLENIEANRLLPTIETYTSILDGYVKGGNIQKALEVFD 419
Query: 331 CMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVN 390
++ P + SY ++LS A ME A + +G VP+ Y L +GYA+
Sbjct: 420 RIKTAGLRPGVVSYNSLLSGLAKARQMENARLMLNEMLANGVVPSERIYTALTEGYARTG 479
Query: 391 NLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKN 450
++EK ++ +M+ + + + ++ A + A ++++ G +Q
Sbjct: 480 DVEKAFGVFQRMKKENLAIDIVAYGALLKACCNSGAMHGAAEVFQQITDAGLKHNQITYC 539
Query: 451 ILLSLAKT-ADERNEANELLGNFNHPNNEPG-------INGLSISVDEED 492
+L A A EA EL+ +P IN +S ED
Sbjct: 540 TMLDGAYARAGRVEEAEELVSAMERDGTKPDTLIYNSLINAYGVSGRHED 589
Score = 128 bits (322), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 88/331 (26%), Positives = 160/331 (48%), Gaps = 10/331 (3%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N+M + M++ Y + GDF A KV M G P +V + L+ A+ + GR A +
Sbjct: 324 NKMIYAMIMDGYARGGDFTAAFKVWEDMVSAGLKPDIVIYNILVHAFCKAGRMDKALGVL 383
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
++++ P+ TY IL +V+ ++A EVF + + + L+P ++ ++
Sbjct: 384 ENIEANRLLPTIETYTSILDGYVKGGNIQKALEVFDRI---KTAGLRPGVVSYNSLLSGL 440
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSK---IYDQMQRAGLQPDV 271
KA E AR + M GV S Y +L +V K ++ +M++ L D+
Sbjct: 441 AKARQMENARLMLNEMLANGVVPSERIYTALTEGYARTGDVEKAFGVFQRMKKENLAIDI 500
Query: 272 VSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLD-AFAISGMVDQARTVFK 330
V+Y L+ A + A VF+++ DAG++ Y +LD A+A +G V++A +
Sbjct: 501 VAYGALLKACCNSGAMHGAAEVFQQITDAGLKHNQITYCTMLDGAYARAGRVEEAEELVS 560
Query: 331 CMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDG---FVPNVITYGTLIKGYA 387
M RD PD Y ++++AY + E E ++ + P++ TY TLI+ YA
Sbjct: 561 AMERDGTKPDTLIYNSLINAYGVSGRHEDMEALLAKMVKSSSKQTKPDIGTYNTLIQVYA 620
Query: 388 KVNNLEKMMEIYDKMRVNGIKPNQTIFTTIM 418
+ + + E++ + + P+ T +T +M
Sbjct: 621 QAGFIPRAEELFQGLARLKLVPDATTWTALM 651
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 91/413 (22%), Positives = 180/413 (43%), Gaps = 64/413 (15%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYG------------------- 142
++ AY + G+ E +L+ M ++G+ ++ +T ++ +
Sbjct: 242 IVQAYCQAGNMETVEALLAQMEEEGFQGNLGLYTTVLNGFAEIRDEEKCLSFFHRLKVSP 301
Query: 143 RGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKP 202
+ G A I M G P+ + Y +I+ + F A +V+ ++ + LKP
Sbjct: 302 QAGNMAKALDILEEMDKHGVSPNKMIYAMIMDGYARGGDFTAAFKVWEDMVS---AGLKP 358
Query: 203 DQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFET---NYKEVSKIY 259
D +++++++ + KAG +KA + + + + TY S++ N ++ +++
Sbjct: 359 DIVIYNILVHAFCKAGRMDKALGVLENIEANRLLPTIETYTSILDGYVKGGNIQKALEVF 418
Query: 260 DQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAIS 319
D+++ AGL+P VVSY L++ KAR+ E A + EML GV P+ + Y L + +A +
Sbjct: 419 DRIKTAGLRPGVVSYNSLLSGLAKARQMENARLMLNEMLANGVVPSERIYTALTEGYART 478
Query: 320 GMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRL------------ 367
G V++A VF+ M+++ + DI +Y +L A N+ M GA + F+++
Sbjct: 479 GDVEKAFGVFQRMKKENLAIDIVAYGALLKACCNSGAMHGAAEVFQQITDAGLKHNQITY 538
Query: 368 ------------------------KQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMR 403
++DG P+ + Y +LI Y E M + KM
Sbjct: 539 CTMLDGAYARAGRVEEAEELVSAMERDGTKPDTLIYNSLINAYGVSGRHEDMEALLAKMV 598
Query: 404 VNG---IKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILL 453
+ KP+ + T++ Y + A ++ + PD L+
Sbjct: 599 KSSSKQTKPDIGTYNTLIQVYAQAGFIPRAEELFQGLARLKLVPDATTWTALM 651
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/268 (23%), Positives = 114/268 (42%), Gaps = 54/268 (20%)
Query: 268 QPDVVSYALLI-----------------------------------NAYGKARREEEALA 292
+P + Y LL+ +AY +AR E A+A
Sbjct: 128 KPVLREYGLLVDFYARHGDKVAARATFEAMRASHIKPNVHIYTSLIHAYAEARDMEGAVA 187
Query: 293 VFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYV 352
EEML G++ + ++ +A +G + A F+ + + P Y +++ AY
Sbjct: 188 CTEEMLSQGIQLNEAVFCSIISGYASAGNNEAAEHWFEKFKAENLVPGGIVYNSIVQAYC 247
Query: 353 NASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRV-------- 404
A +ME E +++++GF N+ Y T++ G+A++ + EK + + +++V
Sbjct: 248 QAGNMETVEALLAQMEEEGFQGNLGLYTTVLNGFAEIRDEEKCLSFFHRLKVSPQAGNMA 307
Query: 405 -----------NGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILL 453
+G+ PN+ I+ IMD Y + DF +A +++M S G PD NIL+
Sbjct: 308 KALDILEEMDKHGVSPNKMIYAMIMDGYARGGDFTAAFKVWEDMVSAGLKPDIVIYNILV 367
Query: 454 SLAKTADERNEANELLGNFNHPNNEPGI 481
A ++A +L N P I
Sbjct: 368 HAFCKAGRMDKALGVLENIEANRLLPTI 395
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/241 (23%), Positives = 104/241 (43%), Gaps = 8/241 (3%)
Query: 303 RPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEK 362
+P + Y +L+D +A G AR F+ MR P++ YT+++ AY A DMEGA
Sbjct: 128 KPVLREYGLLVDFYARHGDKVAARATFEAMRASHIKPNVHIYTSLIHAYAEARDMEGAVA 187
Query: 363 FFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYG 422
+ G N + ++I GYA N E ++K + + P ++ +I+ AY
Sbjct: 188 CTEEMLSQGIQLNEAVFCSIISGYASAGNNEAAEHWFEKFKAENLVPGGIVYNSIVQAYC 247
Query: 423 KNKDFDSAVVWYKEMESCGFPPDQKAKNILLS-LAKTADERNEANELLGNFNHPNNEPGI 481
+ + ++ +ME GF + +L+ A+ DE + L F+ P
Sbjct: 248 QAGNMETVEALLAQMEEEGFQGNLGLYTTVLNGFAEIRDEE----KCLSFFHRLKVSPQA 303
Query: 482 NGLSISVDEEDDDDDDDEDDDDNIYH---DGDGDGDGDDNEDDAEETIACSGKEDELIFF 538
++ ++D ++ D + IY DG G E + +G + +++ +
Sbjct: 304 GNMAKALDILEEMDKHGVSPNKMIYAMIMDGYARGGDFTAAFKVWEDMVSAGLKPDIVIY 363
Query: 539 N 539
N
Sbjct: 364 N 364
>gi|293330959|ref|NP_001169662.1| uncharacterized protein LOC100383543 [Zea mays]
gi|224030695|gb|ACN34423.1| unknown [Zea mays]
gi|414870691|tpg|DAA49248.1| TPA: hypothetical protein ZEAMMB73_502001 [Zea mays]
Length = 756
Score = 149 bits (375), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 115/458 (25%), Positives = 202/458 (44%), Gaps = 25/458 (5%)
Query: 7 RKFMQKRRKVEVFKDAAD-----------EAGKKNWRRLMNQIEEVGSAVAVLRS---ER 52
R F++ ++ F DA D +A + L+N + E GS + +L S E
Sbjct: 128 RSFVESYARLRRFDDAVDLVRNQLNTFGVQADTAVYNHLLNVLAE-GSRMKLLESVYNEM 186
Query: 53 TRGQPLPKDLVLGTLVRLKQLKKWNVVSEVLEWLRIQSWWDF--NEMDFLMLITAYGKQG 110
T P + L TL+ K L + + V + L S +E F L+ + ++G
Sbjct: 187 TDRGIQPDVVTLNTLI--KALCRAHQVRTAVLMLEEMSSHAVAPDETTFTTLMQGFIEEG 244
Query: 111 DFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQ 170
A +V + M + G +P+ V+ L+ Y + GR ++A ++ + G P +TY
Sbjct: 245 SIEAALRVKTKMMETGCSPTRVTVNVLINGYCKMGRVEDALGYIQKEIADGFEPDQVTYN 304
Query: 171 IILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALM 230
+ + A +V +L E P D ++ +I K G ++A+ + M
Sbjct: 305 TFVHCLCQNGHVSHALKVMDLMLQEGHDP---DVFTYNTVINCLSKNGELDEAKGIVNQM 361
Query: 231 AERGVQQSTVTYNSL---MSFETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARRE 287
+RG T T+N+L + + +E + ++ GL PDV ++ +LINA K
Sbjct: 362 VDRGCLPDTTTFNTLIVALCSQNRLEEALDLARELTVKGLSPDVYTFNILINALCKVGDP 421
Query: 288 EEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTM 347
+ +FEEM +G P YNIL+D G + A + K M + C +Y T+
Sbjct: 422 HLGIRLFEEMKSSGCAPDEVTYNILIDHLCSMGKLVNALDLLKEMESNGCPRSTVTYNTI 481
Query: 348 LSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGI 407
+ A +E AE+ F ++ G + +T+ TLI G K ++ E+ ++M G+
Sbjct: 482 IDALCKQMRIEEAEEVFDQMDAHGISRSAVTFNTLIDGLCKAKRIDDATELIEQMVKEGL 541
Query: 408 KPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPD 445
+P+ + +I+ Y K D A + M + GF D
Sbjct: 542 QPSNITYNSILTHYCKQGDLKKAADILETMTANGFEID 579
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 104/451 (23%), Positives = 196/451 (43%), Gaps = 11/451 (2%)
Query: 11 QKRRKVEVFKDAADEA---GKKNWRRLMNQIEEVGSAVAVLRSERTRGQPLPKDLVLGTL 67
Q R V + ++ + A + + LM E GS A LR + + +
Sbjct: 210 QVRTAVLMLEEMSSHAVAPDETTFTTLMQGFIEEGSIEAALRVKTKMMETGCSPTRVTVN 269
Query: 68 VRLKQLKKWNVVSEVLEWLR--IQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKK 125
V + K V + L +++ I ++ +++ + + + G + A KV+ M ++
Sbjct: 270 VLINGYCKMGRVEDALGYIQKEIADGFEPDQVTYNTFVHCLCQNGHVSHALKVMDLMLQE 329
Query: 126 GYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEA 185
G+ P V ++ ++ + G A+ I +M G P T+ ++ N+ +EA
Sbjct: 330 GHDPDVFTYNTVINCLSKNGELDEAKGIVNQMVDRGCLPDTTTFNTLIVALCSQNRLEEA 389
Query: 186 EEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSL 245
++ L L PD F+++I K G +LF M G VTYN L
Sbjct: 390 LDLAREL---TVKGLSPDVYTFNILINALCKVGDPHLGIRLFEEMKSSGCAPDEVTYNIL 446
Query: 246 MSFETNYKEVSKIYD---QMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGV 302
+ + ++ D +M+ G V+Y +I+A K R EEA VF++M G+
Sbjct: 447 IDHLCSMGKLVNALDLLKEMESNGCPRSTVTYNTIIDALCKQMRIEEAEEVFDQMDAHGI 506
Query: 303 RPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEK 362
+ +N L+D + +D A + + M ++ P +Y ++L+ Y D++ A
Sbjct: 507 SRSAVTFNTLIDGLCKAKRIDDATELIEQMVKEGLQPSNITYNSILTHYCKQGDLKKAAD 566
Query: 363 FFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYG 422
+ +GF +V+TYGTLI G K + +++ MR+ GI+P + ++ +
Sbjct: 567 ILETMTANGFEIDVVTYGTLINGLCKAGRTQVALKLLRGMRIKGIRPTPKAYNPVIQSLF 626
Query: 423 KNKDFDSAVVWYKEMESCGFPPDQKAKNILL 453
+ + A+ ++EM G PPD I+
Sbjct: 627 RRNNLRDALSLFREMTEVGEPPDALTYKIVF 657
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 84/356 (23%), Positives = 162/356 (45%), Gaps = 7/356 (1%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFR-RMQSS 160
+I G G F+ E ++ M ++G+ + +E+Y R R+ +A + R ++ +
Sbjct: 95 IIQKLGTAGAFDLMEGLVREMRREGHEAGAGVVRSFVESYARLRRFDDAVDLVRNQLNTF 154
Query: 161 GPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGY 220
G + Y +L + E ++ K E V+ + D ++PD + +I +A
Sbjct: 155 GVQADTAVYNHLLNVLAEGSRMKLLESVYNEMTDR---GIQPDVVTLNTLIKALCRAHQV 211
Query: 221 EKARKLFALMAERGVQQSTVTYNSLMSF---ETNYKEVSKIYDQMQRAGLQPDVVSYALL 277
A + M+ V T+ +LM E + + ++ +M G P V+ +L
Sbjct: 212 RTAVLMLEEMSSHAVAPDETTFTTLMQGFIEEGSIEAALRVKTKMMETGCSPTRVTVNVL 271
Query: 278 INAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRC 337
IN Y K R E+AL ++ + G P YN + +G V A V M ++
Sbjct: 272 INGYCKMGRVEDALGYIQKEIADGFEPDQVTYNTFVHCLCQNGHVSHALKVMDLMLQEGH 331
Query: 338 SPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMME 397
PD+ +Y T+++ +++ A+ ++ G +P+ T+ TLI N LE+ ++
Sbjct: 332 DPDVFTYNTVINCLSKNGELDEAKGIVNQMVDRGCLPDTTTFNTLIVALCSQNRLEEALD 391
Query: 398 IYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILL 453
+ ++ V G+ P+ F +++A K D + ++EM+S G PD+ NIL+
Sbjct: 392 LARELTVKGLSPDVYTFNILINALCKVGDPHLGIRLFEEMKSSGCAPDEVTYNILI 447
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 87/369 (23%), Positives = 168/369 (45%), Gaps = 17/369 (4%)
Query: 86 LRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGG 145
L +Q D + + +I K G+ ++A+ +++ M +G P + L+ A
Sbjct: 325 LMLQEGHDPDVFTYNTVINCLSKNGELDEAKGIVNQMVDRGCLPDTTTFNTLIVALCSQN 384
Query: 146 RYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSP-LKPDQ 204
R + A + R + G P T+ I++ + + + L +E KS PD+
Sbjct: 385 RLEEALDLARELTVKGLSPDVYTFNILINALCKVGD----PHLGIRLFEEMKSSGCAPDE 440
Query: 205 KMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSL---MSFETNYKEVSKIYDQ 261
++++I G A L M G +STVTYN++ + + +E +++DQ
Sbjct: 441 VTYNILIDHLCSMGKLVNALDLLKEMESNGCPRSTVTYNTIIDALCKQMRIEEAEEVFDQ 500
Query: 262 MQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGM 321
M G+ V++ LI+ KA+R ++A + E+M+ G++P++ YN +L + G
Sbjct: 501 MDAHGISRSAVTFNTLIDGLCKAKRIDDATELIEQMVKEGLQPSNITYNSILTHYCKQGD 560
Query: 322 VDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGT 381
+ +A + + M + D+ +Y T+++ A + A K R ++ G P Y
Sbjct: 561 LKKAADILETMTANGFEIDVVTYGTLINGLCKAGRTQVALKLLRGMRIKGIRPTPKAYNP 620
Query: 382 LIKGYAKVNNLEKMMEIYDKMRVNGIKPN----QTIFTTIMDAYGKNKD-FDSAVVWYKE 436
+I+ + NNL + ++ +M G P+ + +F + G K+ FD V E
Sbjct: 621 VIQSLFRRNNLRDALSLFREMTEVGEPPDALTYKIVFRGLCRGGGPIKEAFDFLV----E 676
Query: 437 MESCGFPPD 445
M + GF P+
Sbjct: 677 MVNKGFMPE 685
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 86/392 (21%), Positives = 159/392 (40%), Gaps = 41/392 (10%)
Query: 102 LITAYGKQGDFNKAEKVL-SFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSS 160
L+TA +Q D A ++L S + ++ +APS + +++ G G + E + R M+
Sbjct: 59 LLTALREQADPEAALQMLNSALAREDFAPSRAVYEEIIQKLGTAGAFDLMEGLVREMRRE 118
Query: 161 GPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGY 220
G A + ++ + +F +A ++ L+
Sbjct: 119 GHEAGAGVVRSFVESYARLRRFDDAVDLVRNQLNT------------------------- 153
Query: 221 EKARKLFALMAERGVQQSTVTYNSLMSF---ETNYKEVSKIYDQMQRAGLQPDVVSYALL 277
GVQ T YN L++ + K + +Y++M G+QPDVV+ L
Sbjct: 154 ------------FGVQADTAVYNHLLNVLAEGSRMKLLESVYNEMTDRGIQPDVVTLNTL 201
Query: 278 INAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRC 337
I A +A + A+ + EEM V P + L+ F G ++ A V M C
Sbjct: 202 IKALCRAHQVRTAVLMLEEMSSHAVAPDETTFTTLMQGFIEEGSIEAALRVKTKMMETGC 261
Query: 338 SPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMME 397
SP + +++ Y +E A + ++ DGF P+ +TY T + + ++ ++
Sbjct: 262 SPTRVTVNVLINGYCKMGRVEDALGYIQKEIADGFEPDQVTYNTFVHCLCQNGHVSHALK 321
Query: 398 IYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAK 457
+ D M G P+ + T+++ KN + D A +M G PD N L+
Sbjct: 322 VMDLMLQEGHDPDVFTYNTVINCLSKNGELDEAKGIVNQMVDRGCLPDTTTFNTLIVALC 381
Query: 458 TADERNEANELLGNFNHPNNEPGINGLSISVD 489
+ + EA +L P + +I ++
Sbjct: 382 SQNRLEEALDLARELTVKGLSPDVYTFNILIN 413
>gi|255661146|gb|ACU25742.1| pentatricopeptide repeat-containing protein [Verbena hispida]
Length = 426
Score = 149 bits (375), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 95/374 (25%), Positives = 183/374 (48%), Gaps = 37/374 (9%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
LI K D++KA + S + + G+ P +V++ A++ +G+ ++ A ++ M+++G
Sbjct: 50 LIELSRKLCDYSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMRTAG 109
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
P+ +Y +L ++VE KF EA +F + E K L D ++MI +Y + G +
Sbjct: 110 VTPNTASYSTLLTMYVENKKFLEALSIFAEM-REIKCLL--DLTTCNIMIDVYGQLGMAK 166
Query: 222 KARKLFALMAERGVQQSTVTYNSLMSFETN---YKEVSKIYDQMQRAGLQPDVVSYALLI 278
+A KLF M + G++ + V+YN+L+ + + E ++ MQR ++ +VV+Y ++
Sbjct: 167 EADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMM 226
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCS 338
YGK E+A + +EM + G+ P Y+ ++ + G +D+A +F+ +R
Sbjct: 227 MIYGKTLEHEKANNLIQEMQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVD 286
Query: 339 PDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVP------------------------ 374
D Y TM+ AY A + A++ LK+ +P
Sbjct: 287 IDQVLYQTMIVAYERAGLVAHAKRLLHELKRPDNIPRDIAIHILAGAGRIEEATWVFRQA 346
Query: 375 -------NVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDF 427
++ + +I ++K ++E+++KMR G P+ + +++AYGK +F
Sbjct: 347 IDAGEVKDITVFERMIHLFSKYKKYGNVVEVFNKMRGLGYFPDSNVIALVLNAYGKLHEF 406
Query: 428 DSAVVWYKEMESCG 441
D A Y EM+ G
Sbjct: 407 DKANDVYMEMQEVG 420
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 84/318 (26%), Positives = 146/318 (45%), Gaps = 38/318 (11%)
Query: 200 LKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFE---TNYKEVS 256
L PD+ + +I + K G ++ A M + V V Y++L+ +Y +
Sbjct: 5 LSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDYSKAI 64
Query: 257 KIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAF 316
I+ +++R+G PD+V+Y +IN +GKA+ EA ++ EM AGV P +Y+ LL +
Sbjct: 65 SIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVTPNTASYSTLLTMY 124
Query: 317 AISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNV 376
+ +A ++F MR +C D+ + M+ Y + A+K F +++ G PNV
Sbjct: 125 VENKKFLEALSIFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNV 184
Query: 377 ITYGTLIKGYA---------------KVNNLEK-------MMEIYDK------------- 401
++Y TL++ Y + N+E+ MM IY K
Sbjct: 185 VSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLIQE 244
Query: 402 MRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADE 461
M+ GI+PN ++TI+ +GK D A + ++++ S G DQ ++ + A
Sbjct: 245 MQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVDIDQVLYQTMIVAYERAGL 304
Query: 462 RNEANELLGNFNHPNNEP 479
A LL P+N P
Sbjct: 305 VAHAKRLLHELKRPDNIP 322
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 45/181 (24%), Positives = 79/181 (43%)
Query: 301 GVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGA 360
+ P Y+ L+ F G+ D A + + M +DR D+ Y+ ++ D A
Sbjct: 4 ALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDYSKA 63
Query: 361 EKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDA 420
F RLK+ GF P+++ Y +I + K + + +MR G+ PN ++T++
Sbjct: 64 ISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVTPNTASYSTLLTM 123
Query: 421 YGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPG 480
Y +NK F A+ + EM D NI++ + EA++L EP
Sbjct: 124 YVENKKFLEALSIFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPN 183
Query: 481 I 481
+
Sbjct: 184 V 184
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/244 (22%), Positives = 113/244 (46%), Gaps = 6/244 (2%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + + L+ YG F +A + M +K +VV++ ++M YG+ ++ A +
Sbjct: 183 NVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLI 242
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
+ MQ+ G P+++TY I+ ++ + K A +F L S + DQ ++ MI Y
Sbjct: 243 QEMQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKL---RSSGVDIDQVLYQTMIVAY 299
Query: 215 KKAGGYEKARKLFA-LMAERGVQQSTVTYNSLMSFETNYKEVSKIYDQMQRAGLQPDVVS 273
++AG A++L L + + + +++ +E + ++ Q AG D+
Sbjct: 300 ERAGLVAHAKRLLHELKRPDNIPRDIAIH--ILAGAGRIEEATWVFRQAIDAGEVKDITV 357
Query: 274 YALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMR 333
+ +I+ + K ++ + VF +M G P ++L+A+ D+A V+ M+
Sbjct: 358 FERMIHLFSKYKKYGNVVEVFNKMRGLGYFPDSNVIALVLNAYGKLHEFDKANDVYMEMQ 417
Query: 334 RDRC 337
C
Sbjct: 418 EVGC 421
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/123 (22%), Positives = 64/123 (52%)
Query: 333 RRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNL 392
R SPD +Y+T+++ + + A + ++++QD +++ Y LI+ K+ +
Sbjct: 1 RERALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDY 60
Query: 393 EKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNIL 452
K + I+ +++ +G P+ + +++ +GK K F A EM + G P+ + + L
Sbjct: 61 SKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVTPNTASYSTL 120
Query: 453 LSL 455
L++
Sbjct: 121 LTM 123
>gi|193806393|sp|P0C7Q7.1|PPR38_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial; Flags: Precursor
Length = 602
Score = 149 bits (375), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 87/357 (24%), Positives = 175/357 (49%), Gaps = 6/357 (1%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
+I + + G + A + M KG SVV++ +L+ + G++ + + + M S
Sbjct: 234 IIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSRE 293
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
P+ +T+ ++L +FV+ K +EA E++ ++ + P+ ++ ++ Y
Sbjct: 294 IVPNVITFNVLLDVFVKEGKLQEANELYKEMITR---GISPNIITYNTLMDGYCMQNRLS 350
Query: 222 KARKLFALMAERGVQQSTVTYNSLMSFETNYKEVS---KIYDQMQRAGLQPDVVSYALLI 278
+A + LM VT+ SL+ K V K++ + + GL + V+Y++L+
Sbjct: 351 EANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILV 410
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCS 338
+ ++ + + A +F+EM+ GV P Y ILLD +G +++A +F+ +++ +
Sbjct: 411 QGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMD 470
Query: 339 PDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEI 398
I YTT++ +E A F L G PNV+TY +I G K +L + +
Sbjct: 471 LGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANIL 530
Query: 399 YDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSL 455
KM +G PN + T++ A+ ++ D ++ +EM+SCGF D + +++ +
Sbjct: 531 LRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDM 587
Score = 139 bits (349), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 105/475 (22%), Positives = 205/475 (43%), Gaps = 44/475 (9%)
Query: 44 AVAVLRSERTRGQPLPKDLVLGTLVR-LKQLKKWNVVSEVLEWLRIQSWWDFNEMDFLML 102
A+A+ + E R +PLP + + + K++N+V + + L + N ++
Sbjct: 72 AIALFQ-EMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAH-NIYTLNIM 129
Query: 103 ITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGP 162
I + + A VL + K GY P + L++ G+ A + RM +G
Sbjct: 130 INCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGC 189
Query: 163 RPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEK 222
+P +TY I+ + A ++ + E+ +K D + +I + G +
Sbjct: 190 QPDVVTYNSIVNGICRSGDTSLALDLLRKM---EERNVKADVFTYSTIIDSLCRDGCIDA 246
Query: 223 ARKLFALMAERGVQQSTVTYNSL---MSFETNYKEVSKIYDQMQRAGLQPDVVSYALLIN 279
A LF M +G++ S VTYNSL + + + + + M + P+V+++ +L++
Sbjct: 247 AISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLD 306
Query: 280 AYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSP 339
+ K + +EA +++EM+ G+ P YN L+D + + + +A + M R++CSP
Sbjct: 307 VFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSP 366
Query: 340 DICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFV-------------------------- 373
DI ++T+++ Y ++ K FR + + G V
Sbjct: 367 DIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELF 426
Query: 374 ---------PNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKN 424
P+V+TYG L+ G LEK +EI++ ++ + + ++TTI++ K
Sbjct: 427 QEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKG 486
Query: 425 KDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEP 479
+ A + + G P+ +++S +EAN LL N P
Sbjct: 487 GKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAP 541
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 71/336 (21%), Positives = 158/336 (47%), Gaps = 9/336 (2%)
Query: 41 VGSAVAVLRSERTRGQPLPKDLVLGTLVR-LKQLKKWNVVSEVLEWLRIQSWWDFNEMDF 99
+ +A+++ + T+G + +LVR L + KWN + +L+ + + N + F
Sbjct: 244 IDAAISLFKEMETKGIK-SSVVTYNSLVRGLCKAGKWNDGALLLKDM-VSREIVPNVITF 301
Query: 100 LMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQS 159
+L+ + K+G +A ++ M +G +P+++++ LM+ Y R A + M
Sbjct: 302 NVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVR 361
Query: 160 SGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGG 219
+ P +T+ ++K + + + +VF + K L + + +++ + ++G
Sbjct: 362 NKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNI---SKRGLVANAVTYSILVQGFCQSGK 418
Query: 220 YEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSK---IYDQMQRAGLQPDVVSYAL 276
+ A +LF M GV +TY L+ + ++ K I++ +Q++ + +V Y
Sbjct: 419 IKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTT 478
Query: 277 LINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDR 336
+I K + E+A +F + GV+P Y +++ G + +A + + M D
Sbjct: 479 IIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDG 538
Query: 337 CSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGF 372
+P+ C+Y T++ A++ D+ + K +K GF
Sbjct: 539 NAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGF 574
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/232 (18%), Positives = 103/232 (44%)
Query: 258 IYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFA 317
++ +M R+ P +V ++ +A + ++ L +++ G+ NI+++ F
Sbjct: 75 LFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIMINCFC 134
Query: 318 ISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVI 377
A +V + + PD ++ T++ + A R+ ++G P+V+
Sbjct: 135 RCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVV 194
Query: 378 TYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEM 437
TY +++ G + + +++ KM +K + ++TI+D+ ++ D+A+ +KEM
Sbjct: 195 TYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEM 254
Query: 438 ESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGINGLSISVD 489
E+ G N L+ A + N+ LL + P + ++ +D
Sbjct: 255 ETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLD 306
>gi|414586649|tpg|DAA37220.1| TPA: hypothetical protein ZEAMMB73_348855 [Zea mays]
gi|414586650|tpg|DAA37221.1| TPA: hypothetical protein ZEAMMB73_348855 [Zea mays]
Length = 969
Score = 149 bits (375), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 97/397 (24%), Positives = 181/397 (45%), Gaps = 31/397 (7%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N +F + GK F+KA +++ M +KG+ P +++ ++ + + A +F
Sbjct: 422 NTANFARCLCGMGK---FDKAFQIIKLMMRKGFVPDTSTYSKVITFLCEAMKVEKAFLLF 478
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDE-EKSPLKPDQKMFHMMIYM 213
+ M+S G P TY I++ F + ++A F DE E P + +++
Sbjct: 479 QEMKSVGVIPDVYTYTILIDSFCKVGLIEQARSWF----DEMESVGCSPSVVTYTALLHA 534
Query: 214 YKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSK---IYDQM-------- 262
Y K +A +F M + G +T+TY++L+ E K +Y +M
Sbjct: 535 YLKTKQVPQASDIFHRMVDAGCAPNTITYSALVDGLCKAGESQKACEVYAKMIGTSDNVG 594
Query: 263 --------QRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLD 314
+ P+VV+Y LI+ KA + +A + + M G P H Y+ L+D
Sbjct: 595 SDFYFEGEHTDSIAPNVVTYGALIDGLCKAHKVVDAQELLDVMSSNGCEPNHIIYDALID 654
Query: 315 AFAISGMVDQARTVFKCMRRDRCS--PDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGF 372
F G +D A+ VF R +C P + +YT+++ A ++ A K ++ +
Sbjct: 655 GFCKVGKLDNAQEVF--FRMSKCGYLPTVHTYTSLIDAMFKDRRLDLAIKVLSQMLESSC 712
Query: 373 VPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVV 432
PNV+TY +I G ++ +K +++ M G PN +T+++D GK+ D ++
Sbjct: 713 TPNVVTYTAMIDGLCRIGECQKALKLLSMMEKRGCNPNVVTYTSLIDGLGKSGKVDMSLQ 772
Query: 433 WYKEMESCGFPPDQKAKNILLSLAKTADERNEANELL 469
+ +M + G P+ +L++ A +EA+ LL
Sbjct: 773 LFTQMITQGCAPNYVTYRVLINHCCAAGLLDEAHSLL 809
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 99/435 (22%), Positives = 170/435 (39%), Gaps = 101/435 (23%)
Query: 105 AYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRP 164
A K+G ++ A L + ++ + V T ++ + A + RM+ + P
Sbjct: 251 ALCKEGRWSDA---LVMIEREDFKLDTVLCTQMISGLMEASLFDEAISFLHRMRCNSCIP 307
Query: 165 SALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKAR 224
+ +TY+ +L F++ + + + +++E P+ +F+ +++ Y A Y A
Sbjct: 308 NVVTYRTLLAGFLKKKQLGWCKRIISMMMNEG---CNPNPSLFNSLVHSYCNARDYPYAY 364
Query: 225 KLFALMAERGVQQSTVTYNSLMSFETNYKEVS---------KIYDQM------------- 262
KL MA G V YN + + +E+ K+Y++M
Sbjct: 365 KLLNRMAGCGCPPGYVVYNIFIGSICSGEELPSPDLLALAEKVYEEMLASSCVLNKVNTA 424
Query: 263 ----------------------QRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDA 300
R G PD +Y+ +I +A + E+A +F+EM
Sbjct: 425 NFARCLCGMGKFDKAFQIIKLMMRKGFVPDTSTYSKVITFLCEAMKVEKAFLLFQEMKSV 484
Query: 301 GVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAY--------- 351
GV P Y IL+D+F G+++QAR+ F M CSP + +YT +L AY
Sbjct: 485 GVIPDVYTYTILIDSFCKVGLIEQARSWFDEMESVGCSPSVVTYTALLHAYLKTKQVPQA 544
Query: 352 ------------------------------------------VNASDMEGAEKFFRRLKQ 369
+ SD G++ +F
Sbjct: 545 SDIFHRMVDAGCAPNTITYSALVDGLCKAGESQKACEVYAKMIGTSDNVGSDFYFEGEHT 604
Query: 370 DGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDS 429
D PNV+TYG LI G K + + E+ D M NG +PN I+ ++D + K D+
Sbjct: 605 DSIAPNVVTYGALIDGLCKAHKVVDAQELLDVMSSNGCEPNHIIYDALIDGFCKVGKLDN 664
Query: 430 AVVWYKEMESCGFPP 444
A + M CG+ P
Sbjct: 665 AQEVFFRMSKCGYLP 679
Score = 125 bits (314), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 97/426 (22%), Positives = 192/426 (45%), Gaps = 45/426 (10%)
Query: 78 VVSEVLEWLRIQ-SWWDFNEM----------DFLMLITAYGKQGDFNKAEKVLSFMNKKG 126
V++ + E ++++ ++ F EM + +LI ++ K G +A M G
Sbjct: 461 VITFLCEAMKVEKAFLLFQEMKSVGVIPDVYTYTILIDSFCKVGLIEQARSWFDEMESVG 520
Query: 127 YAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAE 186
+PSVV++TAL+ AY + + A IF RM +G P+ +TY ++ +A + ++A
Sbjct: 521 CSPSVVTYTALLHAYLKTKQVPQASDIFHRMVDAGCAPNTITYSALVDGLCKAGESQKAC 580
Query: 187 EVFMTLLD-------------EEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAER 233
EV+ ++ E + P+ + +I KA A++L +M+
Sbjct: 581 EVYAKMIGTSDNVGSDFYFEGEHTDSIAPNVVTYGALIDGLCKAHKVVDAQELLDVMSSN 640
Query: 234 GVQQSTVTYNSLMSFETNYKEVSK------IYDQMQRAGLQPDVVSYALLINAYGKARRE 287
G + + + Y++L+ + +V K ++ +M + G P V +Y LI+A K RR
Sbjct: 641 GCEPNHIIYDALID---GFCKVGKLDNAQEVFFRMSKCGYLPTVHTYTSLIDAMFKDRRL 697
Query: 288 EEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTM 347
+ A+ V +ML++ P Y ++D G +A + M + C+P++ +YT++
Sbjct: 698 DLAIKVLSQMLESSCTPNVVTYTAMIDGLCRIGECQKALKLLSMMEKRGCNPNVVTYTSL 757
Query: 348 LSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGI 407
+ + ++ + + F ++ G PN +TY LI L++ + +M+
Sbjct: 758 IDGLGKSGKVDMSLQLFTQMITQGCAPNYVTYRVLINHCCAAGLLDEAHSLLSEMK---- 813
Query: 408 KPNQTIFTTIMDAY-----GKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADER 462
QT + + Y G +K F +++ +E+ES G +L+ A
Sbjct: 814 ---QTYWPKYVQGYCSVVQGFSKKFIASLGLLEELESHGMVSIAPVYGLLIDSFSKAGRL 870
Query: 463 NEANEL 468
+A EL
Sbjct: 871 EKALEL 876
Score = 121 bits (304), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 98/447 (21%), Positives = 177/447 (39%), Gaps = 63/447 (14%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + + L+ + K+ ++++S M +G P+ +L+ +Y Y A +
Sbjct: 308 NVVTYRTLLAGFLKKKQLGWCKRIISMMMNEGCNPNPSLFNSLVHSYCNARDYPYAYKLL 367
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKE------AEEVFMTLLDEEKSPLKPDQKMFH 208
RM G P + Y I + + AE+V+ +L K + F
Sbjct: 368 NRMAGCGCPPGYVVYNIFIGSICSGEELPSPDLLALAEKVYEEMLASSCVLNKVNTANFA 427
Query: 209 MMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSK---IYDQMQRA 265
+ G ++KA ++ LM +G T TY+ +++F +V K ++ +M+
Sbjct: 428 RCLC---GMGKFDKAFQIIKLMMRKGFVPDTSTYSKVITFLCEAMKVEKAFLLFQEMKSV 484
Query: 266 GLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQA 325
G+ PDV +Y +LI+++ K E+A + F+EM G P+ Y LL A+ + V QA
Sbjct: 485 GVIPDVYTYTILIDSFCKVGLIEQARSWFDEMESVGCSPSVVTYTALLHAYLKTKQVPQA 544
Query: 326 RTVFKCMRRDRCSPDICSYTTMLSAYVNA----------------SDMEGAEKFFRRLKQ 369
+F M C+P+ +Y+ ++ A SD G++ +F
Sbjct: 545 SDIFHRMVDAGCAPNTITYSALVDGLCKAGESQKACEVYAKMIGTSDNVGSDFYFEGEHT 604
Query: 370 DGFVPNVITYGTLIK-----------------------------------GYAKVNNLEK 394
D PNV+TYG LI G+ KV L+
Sbjct: 605 DSIAPNVVTYGALIDGLCKAHKVVDAQELLDVMSSNGCEPNHIIYDALIDGFCKVGKLDN 664
Query: 395 MMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLS 454
E++ +M G P +T+++DA K++ D A+ +M P+ ++
Sbjct: 665 AQEVFFRMSKCGYLPTVHTYTSLIDAMFKDRRLDLAIKVLSQMLESSCTPNVVTYTAMID 724
Query: 455 LAKTADERNEANELLGNFNHPNNEPGI 481
E +A +LL P +
Sbjct: 725 GLCRIGECQKALKLLSMMEKRGCNPNV 751
Score = 111 bits (278), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 88/352 (25%), Positives = 157/352 (44%), Gaps = 42/352 (11%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + + LI K A+++L M+ G P+ + + AL++ + + G+ NA+ +F
Sbjct: 610 NVVTYGALIDGLCKAHKVVDAQELLDVMSSNGCEPNHIIYDALIDGFCKVGKLDNAQEVF 669
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
RM G P+ TY ++ + + A +V +L+ S P+ + MI
Sbjct: 670 FRMSKCGYLPTVHTYTSLIDAMFKDRRLDLAIKVLSQMLE---SSCTPNVVTYTAMIDGL 726
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVS---KIYDQMQRAGLQPDV 271
+ G +KA KL ++M +RG + VTY SL+ +V +++ QM G P+
Sbjct: 727 CRIGECQKALKLLSMMEKRGCNPNVVTYTSLIDGLGKSGKVDMSLQLFTQMITQGCAPNY 786
Query: 272 VSYALLINAYGKARREEEA---------------------------------LAVFEEML 298
V+Y +LIN A +EA L + EE+
Sbjct: 787 VTYRVLINHCCAAGLLDEAHSLLSEMKQTYWPKYVQGYCSVVQGFSKKFIASLGLLEELE 846
Query: 299 DAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICS---YTTMLSAYVNAS 355
G+ Y +L+D+F+ +G +++A + K M S +I S YT+++ A AS
Sbjct: 847 SHGMVSIAPVYGLLIDSFSKAGRLEKALELHKEMMEVSSSLNITSKDTYTSLIQALCLAS 906
Query: 356 DMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGI 407
+E A + + + + G VP + + LIKG KVN + +++ M G+
Sbjct: 907 QLEKAFELYSEITRKGVVPELSAFICLIKGLIKVNKWNEALQLCYSMCDEGV 958
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 67/273 (24%), Positives = 107/273 (39%), Gaps = 39/273 (14%)
Query: 227 FALMAER--GVQQSTVTYNSLMSFETNYKEVSKIYDQMQRAGLQPDVVSYALLINA-YGK 283
F L AER G + YN+L ++ + ++ +++ R + D L+N K
Sbjct: 123 FFLWAERQVGYSHTGACYNALAEV-LHFDDRARTTERLLREIGEDDREVLGRLLNVIVRK 181
Query: 284 ARRE---EEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFK---------- 330
R +AL + D G RP+ YN L+ A +G +D V K
Sbjct: 182 CCRHGAWAKALEELGRLKDFGYRPSGATYNALVQVLATAGQMDMGFRVQKEMSELGFCTD 241
Query: 331 -----CMRRDRCSP-----------------DICSYTTMLSAYVNASDMEGAEKFFRRLK 368
C + C D T M+S + AS + A F R++
Sbjct: 242 KFTVGCFAQALCKEGRWSDALVMIEREDFKLDTVLCTQMISGLMEASLFDEAISFLHRMR 301
Query: 369 QDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFD 428
+ +PNV+TY TL+ G+ K L I M G PN ++F +++ +Y +D+
Sbjct: 302 CNSCIPNVVTYRTLLAGFLKKKQLGWCKRIISMMMNEGCNPNPSLFNSLVHSYCNARDYP 361
Query: 429 SAVVWYKEMESCGFPPDQKAKNILLSLAKTADE 461
A M CG PP NI + + +E
Sbjct: 362 YAYKLLNRMAGCGCPPGYVVYNIFIGSICSGEE 394
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 71/374 (18%), Positives = 129/374 (34%), Gaps = 15/374 (4%)
Query: 126 GYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEA 185
GY+ + + AL E R + E + R + +I++ + +A
Sbjct: 132 GYSHTGACYNALAEVLHFDDRARTTERLLREIGEDDREVLGRLLNVIVRKCCRHGAWAKA 191
Query: 186 EEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSL 245
E L D +P ++ ++ + AG + ++ M+E G T
Sbjct: 192 LEELGRLKD---FGYRPSGATYNALVQVLATAGQMDMGFRVQKEMSELGFCTDKFTVGCF 248
Query: 246 MSFETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPT 305
S ++R + D V +I+ +A +EA++ M P
Sbjct: 249 AQALCKEGRWSDALVMIEREDFKLDTVLCTQMISGLMEASLFDEAISFLHRMRCNSCIPN 308
Query: 306 HKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFR 365
Y LL F + + + M + C+P+ + +++ +Y NA D A K
Sbjct: 309 VVTYRTLLAGFLKKKQLGWCKRIISMMMNEGCNPNPSLFNSLVHSYCNARDYPYAYKLLN 368
Query: 366 RLKQDGFVPNVITYGTLIKGYAKVNNLEK------MMEIYDKMRVNGI---KPNQTIFTT 416
R+ G P + Y I L ++Y++M + K N F
Sbjct: 369 RMAGCGCPPGYVVYNIFIGSICSGEELPSPDLLALAEKVYEEMLASSCVLNKVNTANFAR 428
Query: 417 IMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPN 476
+ GK FD A K M GF PD + +++ A + +A L
Sbjct: 429 CLCGMGK---FDKAFQIIKLMMRKGFVPDTSTYSKVITFLCEAMKVEKAFLLFQEMKSVG 485
Query: 477 NEPGINGLSISVDE 490
P + +I +D
Sbjct: 486 VIPDVYTYTILIDS 499
>gi|168045050|ref|XP_001774992.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162673739|gb|EDQ60258.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 385
Score = 149 bits (375), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 99/354 (27%), Positives = 177/354 (50%), Gaps = 8/354 (2%)
Query: 81 EVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEA 140
+V E +R Q W+ + +L L+T K +A V + + P+ TAL+
Sbjct: 19 QVFELVRAQEWYTADLSTYLKLLTMLAKAKQAAEASNVFDCLLEDKLRPTTAIFTALLTV 78
Query: 141 YGRGGRYKNAEAIFRRMQ-SSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSP 199
+ + ++K A IF M+ G P TY ++K EA + +A ++F ++ E
Sbjct: 79 FTQSNQFKKALEIFESMRLYEGCVPDKYTYTAMIKGCCEAGLYVQARKIFDEMMIE---G 135
Query: 200 LKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMS-FETNYK--EVS 256
+KP ++++I+ Y KAG + + ++ + M V TVT+N+L+ F N K E+
Sbjct: 136 VKPSIVTYNILIHGYGKAGLFREVERVLSTMEANNVAPDTVTWNTLIRVFGLNCKIPEME 195
Query: 257 KIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAF 316
+ Y+ + R GLQPD+V+ LI+AYG A E+ +V + M T YNI+++A+
Sbjct: 196 QAYEGLLRQGLQPDMVTLNSLISAYGTAGLFEKMESVTQYMQRYNYPMTRITYNIIMEAY 255
Query: 317 AISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNV 376
+GMVDQ +K M+ + P+ ++ +MLSAY EK R+ + +
Sbjct: 256 GRAGMVDQMEETWKRMKAEFVKPNSSTFCSMLSAYGRHGYWHNVEKVMRQARYFD-AADT 314
Query: 377 ITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSA 430
Y I + + N E M +I+++M++ G P+ ++ ++ AY + + D A
Sbjct: 315 AVYNAAIDAFQRAQNFEDMEKIFEEMKLKGHAPDDVTYSILIGAYERIRRVDKA 368
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 80/344 (23%), Positives = 160/344 (46%), Gaps = 41/344 (11%)
Query: 168 TYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLF 227
TY +L + +A + EA VF LL+++ L+P +F ++ ++ ++ ++KA ++F
Sbjct: 36 TYLKLLTMLAKAKQAAEASNVFDCLLEDK---LRPTTAIFTALLTVFTQSNQFKKALEIF 92
Query: 228 ALM-AERGVQQSTVTYNSLMSFETN---YKEVSKIYDQMQRAGLQPDVVSYALLINAYGK 283
M G TY +++ Y + KI+D+M G++P +V+Y +LI+ YGK
Sbjct: 93 ESMRLYEGCVPDKYTYTAMIKGCCEAGLYVQARKIFDEMMIEGVKPSIVTYNILIHGYGK 152
Query: 284 ARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICS 343
A E V M V P +N L+ F ++ + + ++ + R PD+ +
Sbjct: 153 AGLFREVERVLSTMEANNVAPDTVTWNTLIRVFGLNCKIPEMEQAYEGLLRQGLQPDMVT 212
Query: 344 YTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMR 403
+++SAY A E E + +++ + ITY +++ Y + +++M E + +M+
Sbjct: 213 LNSLISAYGTAGLFEKMESVTQYMQRYNYPMTRITYNIIMEAYGRAGMVDQMEETWKRMK 272
Query: 404 VNGIKPNQTIFTTIMDAYGKN-------------KDFDSA--VVW--------------- 433
+KPN + F +++ AYG++ + FD+A V+
Sbjct: 273 AEFVKPNSSTFCSMLSAYGRHGYWHNVEKVMRQARYFDAADTAVYNAAIDAFQRAQNFED 332
Query: 434 ----YKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFN 473
++EM+ G PD +IL+ + ++A +L +N
Sbjct: 333 MEKIFEEMKLKGHAPDDVTYSILIGAYERIRRVDKARDLQEEWN 376
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 82/360 (22%), Positives = 149/360 (41%), Gaps = 43/360 (11%)
Query: 37 QIEEVGSAVAVLRSERTRGQPLPKDLVLGTLVRLKQLKKWNVVSEVLEWLRIQSWWDFNE 96
Q E + L ++ R +L + Q KK E+ E +R+ ++
Sbjct: 49 QAAEASNVFDCLLEDKLRPTTAIFTALLTVFTQSNQFKK---ALEIFESMRLYEGCVPDK 105
Query: 97 MDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRR 156
+ +I + G + +A K+ M +G PS+V++ L+ YG+ G ++ E +
Sbjct: 106 YTYTAMIKGCCEAGLYVQARKIFDEMMIEGVKPSIVTYNILIHGYGKAGLFREVERVLST 165
Query: 157 MQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKK 216
M+++ P +T+ ++++F K E E+ + LL + L+PD + +I Y
Sbjct: 166 MEANNVAPDTVTWNTLIRVFGLNCKIPEMEQAYEGLL---RQGLQPDMVTLNSLISAYGT 222
Query: 217 AGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSKIYDQMQRAGLQPDVVSYAL 276
AG +EK M T Y MQR ++Y +
Sbjct: 223 AGLFEK-----------------------MESVTQY---------MQRYNYPMTRITYNI 250
Query: 277 LINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDR 336
++ AYG+A ++ ++ M V+P + +L A+ G V K MR+ R
Sbjct: 251 IMEAYGRAGMVDQMEETWKRMKAEFVKPNSSTFCSMLSAYGRHGY---WHNVEKVMRQAR 307
Query: 337 C--SPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEK 394
+ D Y + A+ A + E EK F +K G P+ +TY LI Y ++ ++K
Sbjct: 308 YFDAADTAVYNAAIDAFQRAQNFEDMEKIFEEMKLKGHAPDDVTYSILIGAYERIRRVDK 367
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 96/210 (45%), Gaps = 4/210 (1%)
Query: 270 DVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVF 329
D+ +Y L+ KA++ EA VF+ +L+ +RPT + LL F S +A +F
Sbjct: 33 DLSTYLKLLTMLAKAKQAAEASNVFDCLLEDKLRPTTAIFTALLTVFTQSNQFKKALEIF 92
Query: 330 KCMR-RDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAK 388
+ MR + C PD +YT M+ A A K F + +G P+++TY LI GY K
Sbjct: 93 ESMRLYEGCVPDKYTYTAMIKGCCEAGLYVQARKIFDEMMIEGVKPSIVTYNILIHGYGK 152
Query: 389 VNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKA 448
++ + M N + P+ + T++ +G N Y+ + G PD
Sbjct: 153 AGLFREVERVLSTMEANNVAPDTVTWNTLIRVFGLNCKIPEMEQAYEGLLRQGLQPDMVT 212
Query: 449 KNILLSLAKTA---DERNEANELLGNFNHP 475
N L+S TA ++ + + +N+P
Sbjct: 213 LNSLISAYGTAGLFEKMESVTQYMQRYNYP 242
>gi|357462685|ref|XP_003601624.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355490672|gb|AES71875.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 684
Score = 149 bits (375), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 101/404 (25%), Positives = 204/404 (50%), Gaps = 16/404 (3%)
Query: 101 MLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSS 160
M+I+ YGK F +A +L M G PS S++ L+ Y ++ A ++F M
Sbjct: 271 MMISVYGKAKLFREARLLLQEMRDNGVNPSTASYSTLLAIYVDNQKFVEAVSLFSEMNEV 330
Query: 161 GPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGY 220
T I++ ++ + KEA+ F + K ++P+ ++ ++ +Y +AG +
Sbjct: 331 ECPIDLTTCNIMIDVYGQLQMIKEADCFFWGM---RKMGIEPNVVSYNTVLRVYGEAGLF 387
Query: 221 EKARKLFALMAERGVQQSTVTYNSLMSF---ETNYKEVSKIYDQMQRAGLQPDVVSYALL 277
+A LF+LM +GV Q+ VTYN+++S + + + + +MQ G+QP+ ++Y+ +
Sbjct: 388 GEAVHLFSLMQMKGVPQNVVTYNTMISIYGKSLEHDKATNLIQEMQSRGIQPNAITYSTI 447
Query: 278 INAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRC 337
I+ + KA + + A +F ++ +GV+ Y ++ A+ +G+V A+ + +++
Sbjct: 448 ISIWEKAGKLDRAAMLFHKLRTSGVKIDEILYQTMIVAYQKAGLVAHAKRLLNELKQ--- 504
Query: 338 SPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMME 397
PD S T ++ A ++ A FR+ G V ++ +G +I +++ ++E
Sbjct: 505 -PDNVSRETAITILARAGKVDEAMWVFRQAFDAGEVKDISVFGCIIDIFSRERKYAHVVE 563
Query: 398 IYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEM--ESCGFPPDQKAKNILLSL 455
+++KMR G P+ + +++A+GK + F+ A YK+M E C FP + + +L L
Sbjct: 564 VFEKMREVGHFPDSNVIALVLNAFGKLRKFERADALYKQMYEEGCVFPDEVHFQ--MLGL 621
Query: 456 AKTADERNEANELLGNF-NHPN-NEPGINGLSISVDEEDDDDDD 497
+ N L +HPN N+ ++ + ++ E D +D
Sbjct: 622 YGARMDFNMVESLFEKLDSHPNINKKELHFVVANIYERADRFND 665
Score = 131 bits (330), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 92/395 (23%), Positives = 177/395 (44%), Gaps = 8/395 (2%)
Query: 88 IQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKG-YAPSVVSHTALMEAYGRGGR 146
I S ++ ++ +I+ ++ D+ ++ +L +MN+ Y+PS+ + ++ R +
Sbjct: 116 ILSPYNGRQLSIRFMISILSREPDWQRSLAILDWMNEIAQYSPSLNVYNVVIRNVLRAKQ 175
Query: 147 YKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKM 206
++ A +F M G P TY ++ F + F + F L E+ + D +
Sbjct: 176 WQLAHGLFDEMLQKGLSPDKYTYSTLITHFSKQGLFDSS---FFWLQQMERDNVSGDLVL 232
Query: 207 FHMMIYMYKKAGGYEKARKLF-ALMAERGVQQSTVTYNSLMSFETN---YKEVSKIYDQM 262
+ +I + +K Y KA +F AL + + N ++S ++E + +M
Sbjct: 233 YSNLIELSRKLCDYSKAISIFNALKGSGNIVPDLIACNMMISVYGKAKLFREARLLLQEM 292
Query: 263 QRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMV 322
+ G+ P SY+ L+ Y ++ EA+++F EM + NI++D + M+
Sbjct: 293 RDNGVNPSTASYSTLLAIYVDNQKFVEAVSLFSEMNEVECPIDLTTCNIMIDVYGQLQMI 352
Query: 323 DQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTL 382
+A F MR+ P++ SY T+L Y A A F ++ G NV+TY T+
Sbjct: 353 KEADCFFWGMRKMGIEPNVVSYNTVLRVYGEAGLFGEAVHLFSLMQMKGVPQNVVTYNTM 412
Query: 383 IKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGF 442
I Y K +K + +M+ GI+PN ++TI+ + K D A + + ++ + G
Sbjct: 413 ISIYGKSLEHDKATNLIQEMQSRGIQPNAITYSTIISIWEKAGKLDRAAMLFHKLRTSGV 472
Query: 443 PPDQKAKNILLSLAKTADERNEANELLGNFNHPNN 477
D+ ++ + A A LL P+N
Sbjct: 473 KIDEILYQTMIVAYQKAGLVAHAKRLLNELKQPDN 507
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 64/260 (24%), Positives = 118/260 (45%), Gaps = 3/260 (1%)
Query: 225 KLFALMAERGVQQSTVTYN-SLMSFETNYKEVSKIYDQMQR-AGLQPDVVSYALLINAYG 282
+L+++++ +Q ++ + S++S E +++ I D M A P + Y ++I
Sbjct: 112 QLYSILSPYNGRQLSIRFMISILSREPDWQRSLAILDWMNEIAQYSPSLNVYNVVIRNVL 171
Query: 283 KARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDIC 342
+A++ + A +F+EML G+ P Y+ L+ F+ G+ D + + M RD S D+
Sbjct: 172 RAKQWQLAHGLFDEMLQKGLSPDKYTYSTLITHFSKQGLFDSSFFWLQQMERDNVSGDLV 231
Query: 343 SYTTMLSAYVNASDMEGAEKFFRRLKQDG-FVPNVITYGTLIKGYAKVNNLEKMMEIYDK 401
Y+ ++ D A F LK G VP++I +I Y K + + +
Sbjct: 232 LYSNLIELSRKLCDYSKAISIFNALKGSGNIVPDLIACNMMISVYGKAKLFREARLLLQE 291
Query: 402 MRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADE 461
MR NG+ P+ ++T++ Y N+ F AV + EM P D NI++ +
Sbjct: 292 MRDNGVNPSTASYSTLLAIYVDNQKFVEAVSLFSEMNEVECPIDLTTCNIMIDVYGQLQM 351
Query: 462 RNEANELLGNFNHPNNEPGI 481
EA+ EP +
Sbjct: 352 IKEADCFFWGMRKMGIEPNV 371
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/220 (20%), Positives = 100/220 (45%), Gaps = 2/220 (0%)
Query: 272 VSYALLINAYGKARREEEALAVFEEMLD-AGVRPTHKAYNILLDAFAISGMVDQARTVFK 330
+S +I+ + + +LA+ + M + A P+ YN+++ + A +F
Sbjct: 125 LSIRFMISILSREPDWQRSLAILDWMNEIAQYSPSLNVYNVVIRNVLRAKQWQLAHGLFD 184
Query: 331 CMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVN 390
M + SPD +Y+T+++ + + + + +++++D +++ Y LI+ K+
Sbjct: 185 EMLQKGLSPDKYTYSTLITHFSKQGLFDSSFFWLQQMERDNVSGDLVLYSNLIELSRKLC 244
Query: 391 NLEKMMEIYDKMRVNG-IKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAK 449
+ K + I++ ++ +G I P+ ++ YGK K F A + +EM G P +
Sbjct: 245 DYSKAISIFNALKGSGNIVPDLIACNMMISVYGKAKLFREARLLLQEMRDNGVNPSTASY 304
Query: 450 NILLSLAKTADERNEANELLGNFNHPNNEPGINGLSISVD 489
+ LL++ + EA L N + +I +D
Sbjct: 305 STLLAIYVDNQKFVEAVSLFSEMNEVECPIDLTTCNIMID 344
>gi|224133318|ref|XP_002321537.1| predicted protein [Populus trichocarpa]
gi|222868533|gb|EEF05664.1| predicted protein [Populus trichocarpa]
Length = 834
Score = 149 bits (375), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 93/354 (26%), Positives = 169/354 (47%), Gaps = 7/354 (1%)
Query: 70 LKQLKKWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAP 129
LKQL+ V WL+ + + + ++ G+ F K+L M + G P
Sbjct: 312 LKQLQDHTVALGFFHWLKQLPGFKHDGYTYTTMVGILGRAKQFVAINKLLDQMVRDGCQP 371
Query: 130 SVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVF 189
+VV++ L+ +YGR +A +F +MQ +G P +TY ++ + +A A E++
Sbjct: 372 TVVTYNRLIHSYGRANYLNDAVEVFNQMQKAGCEPDRVTYCTLIDIHAKAGFLNFAMEMY 431
Query: 190 MTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFE 249
+ + + L PD + +MI KAG A KLF M E+G + VTYN +++ +
Sbjct: 432 QRM---QAAGLSPDTFTYSVMINCLGKAGHLAAADKLFCEMIEQGCVPNLVTYNIMIALQ 488
Query: 250 T---NYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTH 306
NY+ K+Y MQ AG +PD V+Y++++ G + +EA A+F EM P
Sbjct: 489 AKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHSGYLDEAEAIFSEMKRKNWVPDE 548
Query: 307 KAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRR 366
Y +L+D + +G V++A ++ M P++ + ++LSA++ + + A +
Sbjct: 549 PVYGLLVDLWGKAGNVEKAWEWYQAMLHAGLCPNVPTCNSLLSAFLRVNRLPDAYNLLQS 608
Query: 367 LKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDA 420
+ G P++ TY L+ + + M + M V G P +++ A
Sbjct: 609 MLNLGLNPSLQTYTLLLSCCTEARSPYDMGCYCELMSVTG-HPAHMFLSSLPSA 661
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 75/257 (29%), Positives = 129/257 (50%), Gaps = 6/257 (2%)
Query: 234 GVQQSTVTYNSLMSFETNYKE---VSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEA 290
G + TY +++ K+ ++K+ DQM R G QP VV+Y LI++YG+A +A
Sbjct: 333 GFKHDGYTYTTMVGILGRAKQFVAINKLLDQMVRDGCQPTVVTYNRLIHSYGRANYLNDA 392
Query: 291 LAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSA 350
+ VF +M AG P Y L+D A +G ++ A +++ M+ SPD +Y+ M++
Sbjct: 393 VEVFNQMQKAGCEPDRVTYCTLIDIHAKAGFLNFAMEMYQRMQAAGLSPDTFTYSVMINC 452
Query: 351 YVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPN 410
A + A+K F + + G VPN++TY +I AK N + +++Y M+ G +P+
Sbjct: 453 LGKAGHLAAADKLFCEMIEQGCVPNLVTYNIMIALQAKARNYQNALKLYRDMQNAGFEPD 512
Query: 411 QTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLG 470
+ ++ +M+ G + D A + EM+ + PD+ +L+ L A +A E
Sbjct: 513 KVTYSIVMEVLGHSGYLDEAEAIFSEMKRKNWVPDEPVYGLLVDLWGKAGNVEKAWEWYQ 572
Query: 471 NFNHPN---NEPGINGL 484
H N P N L
Sbjct: 573 AMLHAGLCPNVPTCNSL 589
Score = 125 bits (313), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 89/355 (25%), Positives = 167/355 (47%), Gaps = 21/355 (5%)
Query: 129 PSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEV 188
P+VV+ +A + G +N I R+++ PSA + L ++A +A +V
Sbjct: 259 PAVVARSA-RQFVSTGHVVENVSQILRQLRWG---PSAEEALVNLNCHMDA---YQANQV 311
Query: 189 FMTLLD-----------EEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQ 237
L D ++ K D + M+ + +A + KL M G Q
Sbjct: 312 LKQLQDHTVALGFFHWLKQLPGFKHDGYTYTTMVGILGRAKQFVAINKLLDQMVRDGCQP 371
Query: 238 STVTYNSLMSF--ETNY-KEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVF 294
+ VTYN L+ NY + ++++QMQ+AG +PD V+Y LI+ + KA A+ ++
Sbjct: 372 TVVTYNRLIHSYGRANYLNDAVEVFNQMQKAGCEPDRVTYCTLIDIHAKAGFLNFAMEMY 431
Query: 295 EEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNA 354
+ M AG+ P Y+++++ +G + A +F M C P++ +Y M++ A
Sbjct: 432 QRMQAAGLSPDTFTYSVMINCLGKAGHLAAADKLFCEMIEQGCVPNLVTYNIMIALQAKA 491
Query: 355 SDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIF 414
+ + A K +R ++ GF P+ +TY +++ L++ I+ +M+ P++ ++
Sbjct: 492 RNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHSGYLDEAEAIFSEMKRKNWVPDEPVY 551
Query: 415 TTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELL 469
++D +GK + + A WY+ M G P+ N LLS + +A LL
Sbjct: 552 GLLVDLWGKAGNVEKAWEWYQAMLHAGLCPNVPTCNSLLSAFLRVNRLPDAYNLL 606
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 84/346 (24%), Positives = 155/346 (44%), Gaps = 38/346 (10%)
Query: 133 SHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTL 192
++T ++ GR ++ + +M G +P+ +TY ++ + AN +A EVF +
Sbjct: 340 TYTTMVGILGRAKQFVAINKLLDQMVRDGCQPTVVTYNRLIHSYGRANYLNDAVEVFNQM 399
Query: 193 LDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNY 252
+K+ +PD+ + +I ++ KAG FA+
Sbjct: 400 ---QKAGCEPDRVTYCTLIDIHAKAGFLN-----FAM----------------------- 428
Query: 253 KEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNIL 312
++Y +MQ AGL PD +Y+++IN GKA A +F EM++ G P YNI+
Sbjct: 429 ----EMYQRMQAAGLSPDTFTYSVMINCLGKAGHLAAADKLFCEMIEQGCVPNLVTYNIM 484
Query: 313 LDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGF 372
+ A + A +++ M+ PD +Y+ ++ ++ ++ AE F +K+ +
Sbjct: 485 IALQAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHSGYLDEAEAIFSEMKRKNW 544
Query: 373 VPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVV 432
VP+ YG L+ + K N+EK E Y M G+ PN +++ A+ + A
Sbjct: 545 VPDEPVYGLLVDLWGKAGNVEKAWEWYQAMLHAGLCPNVPTCNSLLSAFLRVNRLPDAYN 604
Query: 433 WYKEMESCGFPPDQKAKNILLSL---AKTADERNEANELLGNFNHP 475
+ M + G P + +LLS A++ + EL+ HP
Sbjct: 605 LLQSMLNLGLNPSLQTYTLLLSCCTEARSPYDMGCYCELMSVTGHP 650
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 49/217 (22%), Positives = 106/217 (48%)
Query: 263 QRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMV 322
Q G + D +Y ++ G+A++ + ++M+ G +PT YN L+ ++ + +
Sbjct: 330 QLPGFKHDGYTYTTMVGILGRAKQFVAINKLLDQMVRDGCQPTVVTYNRLIHSYGRANYL 389
Query: 323 DQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTL 382
+ A VF M++ C PD +Y T++ + A + A + ++R++ G P+ TY +
Sbjct: 390 NDAVEVFNQMQKAGCEPDRVTYCTLIDIHAKAGFLNFAMEMYQRMQAAGLSPDTFTYSVM 449
Query: 383 IKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGF 442
I K +L +++ +M G PN + ++ K +++ +A+ Y++M++ GF
Sbjct: 450 INCLGKAGHLAAADKLFCEMIEQGCVPNLVTYNIMIALQAKARNYQNALKLYRDMQNAGF 509
Query: 443 PPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEP 479
PD+ +I++ + + +EA + N P
Sbjct: 510 EPDKVTYSIVMEVLGHSGYLDEAEAIFSEMKRKNWVP 546
>gi|168030898|ref|XP_001767959.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162680801|gb|EDQ67234.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 957
Score = 149 bits (375), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 96/372 (25%), Positives = 182/372 (48%), Gaps = 7/372 (1%)
Query: 100 LMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQS 159
+++I YG++G F KA+ + + + KK + PS+ + +++ + A +F RM+
Sbjct: 548 VLMINLYGRRGLFQKAKSLFNSLQKKDHPPSLYVYNTMIKLCAVCKELEEAIFVFDRMEE 607
Query: 160 SGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGG 219
+G A+T I++ + + +FK+A + + +K + D ++ + K+G
Sbjct: 608 NGRMFDAVTVSILVHAYTKEGRFKDAAGL---MKRAKKVGVAMDTVAYNTSLKANLKSGN 664
Query: 220 YEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSKI---YDQMQRAGLQPDVVSYAL 276
+ A +++ M E ++ S TY L+S + ++ + ++ + + + D ++Y+
Sbjct: 665 LKGALEVYGEMQEADIEPSAKTYTILISLFSKLGDLGRAVQAFEVLNSSEVGADEIAYSQ 724
Query: 277 LINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDR 336
+I+ YG A R +EA +F+EM G +P YN LLDAFA +G+ +AR + MRR
Sbjct: 725 MIHCYGCAGRPKEAADLFQEMETKGFKPNEVIYNNLLDAFARAGLFAEARLLLSDMRRKG 784
Query: 337 CSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMM 396
C P +Y ++SAY + AE ++ G P+ Y +I+ Y V L
Sbjct: 785 CPPSSVTYLLLMSAYGSKGKPADAESLLHLMQDRGLYPDCRHYNEVIRAYGNVGKLSDAC 844
Query: 397 EIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLA 456
I+ +++ GI F T++ + + F+ YK++ S F DQ I + L
Sbjct: 845 RIFYELKTVGIGLELGCFRTLVKIHLDHGQFEQGWQIYKDL-SQSFTVDQNLYGIAVELC 903
Query: 457 KTADERNEANEL 468
A R EA++L
Sbjct: 904 IGAGRRTEADQL 915
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 110/457 (24%), Positives = 194/457 (42%), Gaps = 72/457 (15%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
+E+ + +I A GK G + ++E + M K+G PS ++T ++ + + GR+ +A
Sbjct: 246 DELLYNTIICALGKLGRYQESEALYLDMKKQGIVPSKFTYTIMINVWSKAGRFASAAETL 305
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVF-----MTLLDEEKSPLKPDQKMFHM 209
MQ SG + Y I+ ++ +A ++EAE++F + LL EKS +
Sbjct: 306 AEMQRSGCIADEVVYCSIINMYGKAGLYEEAEKIFKEMDTLGLLSHEKS--------YTS 357
Query: 210 MIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEV---SKIYDQMQRAG 266
M + +AG + +A KLF +MAE+G+ + +T+N+L+ +V +K+Y+ M AG
Sbjct: 358 MAKVRAEAGRHAEALKLFDVMAEKGLLTTRMTWNTLLHCFVRIGDVEQATKVYNDMVEAG 417
Query: 267 LQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQAR 326
+VV+Y +IN Y K + E+A + EM ++GV+P Y + + S M+D+A
Sbjct: 418 -SANVVTYGNMINLYSKFQMVEDAENLLAEMRESGVKPDEYIYGSFVKLYCNSDMIDKAT 476
Query: 327 TVFK----------CMRRDR---------------------------------------- 336
V + C R+
Sbjct: 477 MVVQEMKDDGLESVCNEREMFPLGQALQSPIDTQILNQLLIKRAEAGELREAELLLDKLV 536
Query: 337 ----CSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNL 392
C D + M++ Y + A+ F L++ P++ Y T+IK A L
Sbjct: 537 EAGGCIVDTAA-VLMINLYGRRGLFQKAKSLFNSLQKKDHPPSLYVYNTMIKLCAVCKEL 595
Query: 393 EKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNIL 452
E+ + ++D+M NG + + ++ AY K F A K + G D A N
Sbjct: 596 EEAIFVFDRMEENGRMFDAVTVSILVHAYTKEGRFKDAAGLMKRAKKVGVAMDTVAYNTS 655
Query: 453 LSLAKTADERNEANELLGNFNHPNNEPGINGLSISVD 489
L + A E+ G + EP +I +
Sbjct: 656 LKANLKSGNLKGALEVYGEMQEADIEPSAKTYTILIS 692
Score = 128 bits (322), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 93/387 (24%), Positives = 173/387 (44%), Gaps = 36/387 (9%)
Query: 56 QPLPKDLVLGTL-VRLKQLKKWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNK 114
+P KDL + + LK+ + W E EW+++Q + + + + L+ YG+ G
Sbjct: 66 KPFVKDLGFRDMCIVLKEQRGWRQAREFFEWMKLQIPYSPSVIAYTTLLGIYGQAGKLTL 125
Query: 115 AEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILK 174
AE+ LS M G P V+ ++EAY R RY + M+ G PSA Y+ ++
Sbjct: 126 AEETLSEMLDAGVEPDEVAGGCMLEAYARWERYDTLLEFYEAMRQRGLVPSAHVYRTMIV 185
Query: 175 LFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERG 234
+A + +A ++ LL E+ L+P+ ++ ++I++ K G E A F
Sbjct: 186 TLYKAERHSDALMLWEDLLVEK---LEPNFVLYAIIIHILNKEGRTEDAVHTF------- 235
Query: 235 VQQSTVTYNSLMSFETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVF 294
M+ AG PD + Y +I A GK R +E+ A++
Sbjct: 236 -------------------------KDMRAAGHLPDELLYNTIICALGKLGRYQESEALY 270
Query: 295 EEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNA 354
+M G+ P+ Y I+++ ++ +G A M+R C D Y ++++ Y A
Sbjct: 271 LDMKKQGIVPSKFTYTIMINVWSKAGRFASAAETLAEMQRSGCIADEVVYCSIINMYGKA 330
Query: 355 SDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIF 414
E AEK F+ + G + + +Y ++ K A+ + ++++D M G+ + +
Sbjct: 331 GLYEEAEKIFKEMDTLGLLSHEKSYTSMAKVRAEAGRHAEALKLFDVMAEKGLLTTRMTW 390
Query: 415 TTIMDAYGKNKDFDSAVVWYKEMESCG 441
T++ + + D + A Y +M G
Sbjct: 391 NTLLHCFVRIGDVEQATKVYNDMVEAG 417
Score = 111 bits (278), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 94/428 (21%), Positives = 180/428 (42%), Gaps = 54/428 (12%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
M + L+ + + GD +A KV + M + G A +VV++ ++ Y + ++AE +
Sbjct: 386 TRMTWNTLLHCFVRIGDVEQATKVYNDMVEAGSA-NVVTYGNMINLYSKFQMVEDAENLL 444
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHM----- 209
M+ SG +P Y +KL+ ++ +A V + D+ + +++MF +
Sbjct: 445 AEMRESGVKPDEYIYGSFVKLYCNSDMIDKATMVVQEMKDDGLESVCNEREMFPLGQALQ 504
Query: 210 ---------------------------------------------MIYMYKKAGGYEKAR 224
MI +Y + G ++KA+
Sbjct: 505 SPIDTQILNQLLIKRAEAGELREAELLLDKLVEAGGCIVDTAAVLMINLYGRRGLFQKAK 564
Query: 225 KLFALMAERGVQQSTVTYNSLMSFETNYKEVSK---IYDQMQRAGLQPDVVSYALLINAY 281
LF + ++ S YN+++ KE+ + ++D+M+ G D V+ ++L++AY
Sbjct: 565 SLFNSLQKKDHPPSLYVYNTMIKLCAVCKELEEAIFVFDRMEENGRMFDAVTVSILVHAY 624
Query: 282 GKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDI 341
K R ++A + + GV AYN L A SG + A V+ M+ P
Sbjct: 625 TKEGRFKDAAGLMKRAKKVGVAMDTVAYNTSLKANLKSGNLKGALEVYGEMQEADIEPSA 684
Query: 342 CSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDK 401
+YT ++S + D+ A + F L + I Y +I Y ++ +++ +
Sbjct: 685 KTYTILISLFSKLGDLGRAVQAFEVLNSSEVGADEIAYSQMIHCYGCAGRPKEAADLFQE 744
Query: 402 MRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADE 461
M G KPN+ I+ ++DA+ + F A + +M G PP +L+S + +
Sbjct: 745 METKGFKPNEVIYNNLLDAFARAGLFAEARLLLSDMRRKGCPPSSVTYLLLMSAYGSKGK 804
Query: 462 RNEANELL 469
+A LL
Sbjct: 805 PADAESLL 812
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 76/294 (25%), Positives = 140/294 (47%), Gaps = 7/294 (2%)
Query: 94 FNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAI 153
F+ + +L+ AY K+G F A ++ K G A V++ ++A + G K A +
Sbjct: 612 FDAVTVSILVHAYTKEGRFKDAAGLMKRAKKVGVAMDTVAYNTSLKANLKSGNLKGALEV 671
Query: 154 FRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYM 213
+ MQ + PSA TY I++ LF + A + F L S + D+ + MI+
Sbjct: 672 YGEMQEADIEPSAKTYTILISLFSKLGDLGRAVQAFEVL---NSSEVGADEIAYSQMIHC 728
Query: 214 YKKAGGYEKARKLFALMAERGVQQSTVTYNSLM-SFETN--YKEVSKIYDQMQRAGLQPD 270
Y AG ++A LF M +G + + V YN+L+ +F + E + M+R G P
Sbjct: 729 YGCAGRPKEAADLFQEMETKGFKPNEVIYNNLLDAFARAGLFAEARLLLSDMRRKGCPPS 788
Query: 271 VVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFK 330
V+Y LL++AYG + +A ++ M D G+ P + YN ++ A+ G + A +F
Sbjct: 789 SVTYLLLMSAYGSKGKPADAESLLHLMQDRGLYPDCRHYNEVIRAYGNVGKLSDACRIFY 848
Query: 331 CMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIK 384
++ ++ + T++ +++ E + ++ L Q F + YG ++
Sbjct: 849 ELKTVGIGLELGCFRTLVKIHLDHGQFEQGWQIYKDLSQS-FTVDQNLYGIAVE 901
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 80/328 (24%), Positives = 143/328 (43%), Gaps = 39/328 (11%)
Query: 147 YKNAEAIFRRMQSSGP-RPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQK 205
++ A F M+ P PS + Y +L ++ +A K AEE +LD + ++PD+
Sbjct: 87 WRQAREFFEWMKLQIPYSPSVIAYTTLLGIYGQAGKLTLAEETLSEMLD---AGVEPDEV 143
Query: 206 MFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSKIYDQMQRA 265
M+ Y + +E+ Y++L+ F Y+ M++
Sbjct: 144 AGGCMLEAYAR---WER-------------------YDTLLEF----------YEAMRQR 171
Query: 266 GLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQA 325
GL P Y +I KA R +AL ++E++L + P Y I++ G + A
Sbjct: 172 GLVPSAHVYRTMIVTLYKAERHSDALMLWEDLLVEKLEPNFVLYAIIIHILNKEGRTEDA 231
Query: 326 RTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKG 385
FK MR PD Y T++ A + +E + +K+ G VP+ TY +I
Sbjct: 232 VHTFKDMRAAGHLPDELLYNTIICALGKLGRYQESEALYLDMKKQGIVPSKFTYTIMINV 291
Query: 386 YAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPD 445
++K E +M+ +G ++ ++ +I++ YGK ++ A +KEM++ G
Sbjct: 292 WSKAGRFASAAETLAEMQRSGCIADEVVYCSIINMYGKAGLYEEAEKIFKEMDTLGLLSH 351
Query: 446 QKAKNILLSLAKTADERNEANELLGNFN 473
+K+ S+AK E E L F+
Sbjct: 352 EKSYT---SMAKVRAEAGRHAEALKLFD 376
>gi|255661218|gb|ACU25778.1| pentatricopeptide repeat-containing protein [Casselia glaziovii]
Length = 426
Score = 149 bits (375), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 91/378 (24%), Positives = 186/378 (49%), Gaps = 41/378 (10%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
LI K D++KA + S + + G P +V++ +++ +G+ +K A ++ M+++G
Sbjct: 50 LIELSRKLCDYSKAISIFSRLKRSGITPDLVAYNSMINVFGKAKLFKEARSLIGEMRTAG 109
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTL------LD--------------------- 194
P+ ++Y +L ++VE KF EA VF + LD
Sbjct: 110 VMPNTISYSTLLTMYVENKKFIEALSVFAEMREIQCSLDLITCNIMIDVYGQLGMAKEAD 169
Query: 195 -----EEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSF- 248
K ++P+ ++ ++ +Y A + +A LF LM + ++Q+ VTYN++M
Sbjct: 170 KLFWGXRKMEIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNTMMMIY 229
Query: 249 --ETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTH 306
+++ + + +MQ G++P+ ++Y+ +I+ +GK + + A +F+++ +G+
Sbjct: 230 GKTLEHEKANNLIQEMQNRGIEPNTITYSTIISIWGKVGKLDRAAMLFQKLRSSGIEIDQ 289
Query: 307 KAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRR 366
Y ++ + +G+V A+ + ++R PD T + A +E A FR+
Sbjct: 290 VLYQTMIITYERAGLVAHAKRLLHELKR----PDNIPRDTAIHILAGAGRIEEATWVFRQ 345
Query: 367 LKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKD 426
+ G V ++ + +I ++K ++E++DKMR G P+ + +++AYGK ++
Sbjct: 346 AIEAGEVKDITVFEHMIDLFSKYKKYSNIIEVFDKMRGIGYFPDSRVIALVLNAYGKLQE 405
Query: 427 FDSAVVWYKEM--ESCGF 442
FD A Y EM E C F
Sbjct: 406 FDKANEVYMEMQDEGCIF 423
Score = 125 bits (313), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 86/318 (27%), Positives = 147/318 (46%), Gaps = 38/318 (11%)
Query: 200 LKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFE---TNYKEVS 256
L PD+ + +I + K G ++ A M E V V Y++L+ +Y +
Sbjct: 5 LSPDRYTYSTLITHFGKEGRFDDALSWLQKMEEDRVPGDLVLYSNLIELSRKLCDYSKAI 64
Query: 257 KIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAF 316
I+ +++R+G+ PD+V+Y +IN +GKA+ +EA ++ EM AGV P +Y+ LL +
Sbjct: 65 SIFSRLKRSGITPDLVAYNSMINVFGKAKLFKEARSLIGEMRTAGVMPNTISYSTLLTMY 124
Query: 317 AISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNV 376
+ +A +VF MR +CS D+ + M+ Y + A+K F ++ PNV
Sbjct: 125 VENKKFIEALSVFAEMREIQCSLDLITCNIMIDVYGQLGMAKEADKLFWGXRKMEIEPNV 184
Query: 377 ITYGTLIKGYA---------------KVNNLEK-------MMEIYDK------------- 401
++Y TL++ Y + N+E+ MM IY K
Sbjct: 185 VSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNTMMMIYGKTLEHEKANNLIQE 244
Query: 402 MRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADE 461
M+ GI+PN ++TI+ +GK D A + ++++ S G DQ ++ + A
Sbjct: 245 MQNRGIEPNTITYSTIISIWGKVGKLDRAAMLFQKLRSSGIEIDQVLYQTMIITYERAGL 304
Query: 462 RNEANELLGNFNHPNNEP 479
A LL P+N P
Sbjct: 305 VAHAKRLLHELKRPDNIP 322
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 71/300 (23%), Positives = 154/300 (51%), Gaps = 6/300 (2%)
Query: 125 KGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKE 184
+ +P +++ L+ +G+ GR+ +A + ++M+ + Y +++L + + +
Sbjct: 3 RALSPDRYTYSTLITHFGKEGRFDDALSWLQKMEEDRVPGDLVLYSNLIELSRKLCDYSK 62
Query: 185 AEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNS 244
A +F L ++S + PD ++ MI ++ KA +++AR L M GV +T++Y++
Sbjct: 63 AISIFSRL---KRSGITPDLVAYNSMINVFGKAKLFKEARSLIGEMRTAGVMPNTISYST 119
Query: 245 LMSFETNYK---EVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAG 301
L++ K E ++ +M+ D+++ ++I+ YG+ +EA +F
Sbjct: 120 LLTMYVENKKFIEALSVFAEMREIQCSLDLITCNIMIDVYGQLGMAKEADKLFWGXRKME 179
Query: 302 VRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAE 361
+ P +YN LL + + + +A +F+ M+R ++ +Y TM+ Y + E A
Sbjct: 180 IEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNTMMMIYGKTLEHEKAN 239
Query: 362 KFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAY 421
+ ++ G PN ITY T+I + KV L++ ++ K+R +GI+ +Q ++ T++ Y
Sbjct: 240 NLIQEMQNRGIEPNTITYSTIISIWGKVGKLDRAAMLFQKLRSSGIEIDQVLYQTMIITY 299
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/244 (22%), Positives = 116/244 (47%), Gaps = 6/244 (2%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + + L+ YG F +A + M +K +VV++ +M YG+ ++ A +
Sbjct: 183 NVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNTMMMIYGKTLEHEKANNLI 242
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
+ MQ+ G P+ +TY I+ ++ + K A +F L S ++ DQ ++ MI Y
Sbjct: 243 QEMQNRGIEPNTITYSTIISIWGKVGKLDRAAMLFQKL---RSSGIEIDQVLYQTMIITY 299
Query: 215 KKAGGYEKARKLFA-LMAERGVQQSTVTYNSLMSFETNYKEVSKIYDQMQRAGLQPDVVS 273
++AG A++L L + + T + +++ +E + ++ Q AG D+
Sbjct: 300 ERAGLVAHAKRLLHELKRPDNIPRDTAIH--ILAGAGRIEEATWVFRQAIEAGEVKDITV 357
Query: 274 YALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMR 333
+ +I+ + K ++ + VF++M G P + ++L+A+ D+A V+ M+
Sbjct: 358 FEHMIDLFSKYKKYSNIIEVFDKMRGIGYFPDSRVIALVLNAYGKLQEFDKANEVYMEMQ 417
Query: 334 RDRC 337
+ C
Sbjct: 418 DEGC 421
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 78/181 (43%)
Query: 301 GVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGA 360
+ P Y+ L+ F G D A + + M DR D+ Y+ ++ D A
Sbjct: 4 ALSPDRYTYSTLITHFGKEGRFDDALSWLQKMEEDRVPGDLVLYSNLIELSRKLCDYSKA 63
Query: 361 EKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDA 420
F RLK+ G P+++ Y ++I + K ++ + +MR G+ PN ++T++
Sbjct: 64 ISIFSRLKRSGITPDLVAYNSMINVFGKAKLFKEARSLIGEMRTAGVMPNTISYSTLLTM 123
Query: 421 YGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPG 480
Y +NK F A+ + EM D NI++ + EA++L EP
Sbjct: 124 YVENKKFIEALSVFAEMREIQCSLDLITCNIMIDVYGQLGMAKEADKLFWGXRKMEIEPN 183
Query: 481 I 481
+
Sbjct: 184 V 184
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 79/363 (21%), Positives = 150/363 (41%), Gaps = 56/363 (15%)
Query: 52 RTRGQPLPKDLVLGTLVRL-----KQLKKWNVVSEVLEWLRIQSWWDFNEMDFLMLITAY 106
RT G +P + TL+ + K ++ +V +E+ E IQ D + ++I Y
Sbjct: 106 RTAG-VMPNTISYSTLLTMYVENKKFIEALSVFAEMRE---IQCSLDLITCN--IMIDVY 159
Query: 107 GKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSA 166
G+ G +A+K+ K P+VVS+ L+ YG + A +FR MQ +
Sbjct: 160 GQLGMAKEADKLFWGXRKMEIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNV 219
Query: 167 LTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKL 226
+TY + M+ +Y K +EKA L
Sbjct: 220 VTY--------------------------------------NTMMMIYGKTLEHEKANNL 241
Query: 227 FALMAERGVQQSTVTYNSLMSFETNYKEVSK---IYDQMQRAGLQPDVVSYALLINAYGK 283
M RG++ +T+TY++++S ++ + ++ +++ +G++ D V Y +I Y +
Sbjct: 242 IQEMQNRGIEPNTITYSTIISIWGKVGKLDRAAMLFQKLRSSGIEIDQVLYQTMIITYER 301
Query: 284 ARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICS 343
A A + E+ P A +IL A G +++A VF+ DI
Sbjct: 302 AGLVAHAKRLLHELKRPDNIPRDTAIHILAGA----GRIEEATWVFRQAIEAGEVKDITV 357
Query: 344 YTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMR 403
+ M+ + + F +++ G+ P+ ++ Y K+ +K E+Y +M+
Sbjct: 358 FEHMIDLFSKYKKYSNIIEVFDKMRGIGYFPDSRVIALVLNAYGKLQEFDKANEVYMEMQ 417
Query: 404 VNG 406
G
Sbjct: 418 DEG 420
>gi|15228936|ref|NP_188942.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75273922|sp|Q9LS88.1|PP250_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g23020
gi|9294191|dbj|BAB02093.1| unnamed protein product [Arabidopsis thaliana]
gi|332643185|gb|AEE76706.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 842
Score = 149 bits (375), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 106/404 (26%), Positives = 198/404 (49%), Gaps = 19/404 (4%)
Query: 68 VRLKQLKKWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGY 127
+ LK+ W E+ EW + + ++ N + + +++ GK + + + M +KG
Sbjct: 159 IILKEQIHWERAVEIFEWFKSKGCYELNVIHYNIMLRILGKACKWRYVQSLWDEMIRKGI 218
Query: 128 APSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEE 187
P ++ L++ Y +GG +A +M G +P +T I+L+++ +A +F++AEE
Sbjct: 219 KPINSTYGTLIDVYSKGGLKVHALCWLGKMSKIGMQPDEVTTGIVLQMYKKAREFQKAEE 278
Query: 188 VFMTL-LDEEK--SPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNS 244
F DE K S + ++ MI Y K+G ++A + F M E G+ +TVT+N+
Sbjct: 279 FFKKWSCDENKADSHVCLSSYTYNTMIDTYGKSGQIKEASETFKRMLEEGIVPTTVTFNT 338
Query: 245 LMSFETNYKEVSKIYDQMQRAGLQ--PDVVSYALLINAYGKARREEEALAVFEEMLDAGV 302
++ N ++ ++ M+ L PD +Y +LI+ + K E A A F+EM D G+
Sbjct: 339 MIHIYGNNGQLGEVTSLMKTMKLHCAPDTRTYNILISLHTKNNDIERAGAYFKEMKDDGL 398
Query: 303 RPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEK 362
+P +Y LL AF+I MV++A + M D D + + + YV A +E +
Sbjct: 399 KPDPVSYRTLLYAFSIRHMVEEAEGLIAEMDDDNVEIDEYTQSALTRMYVEAEMLEKSWS 458
Query: 363 FFRR------LKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTT 416
+F+R + +G+ N+ YG +GY ++ E++ ++ K +
Sbjct: 459 WFKRFHVAGNMSSEGYSANIDAYGE--RGY--LSEAERVFICCQEVN----KRTVIEYNV 510
Query: 417 IMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTAD 460
++ AYG +K + A ++ M S G PD+ N L+ + +AD
Sbjct: 511 MIKAYGISKSCEKACELFESMMSYGVTPDKCTYNTLVQILASAD 554
Score = 128 bits (321), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 102/448 (22%), Positives = 183/448 (40%), Gaps = 61/448 (13%)
Query: 73 LKKWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVV 132
KKW+ + S + +N M I YGK G +A + M ++G P+ V
Sbjct: 280 FKKWSCDENKADSHVCLSSYTYNTM-----IDTYGKSGQIKEASETFKRMLEEGIVPTTV 334
Query: 133 SHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTL 192
+ ++ YG G+ ++ + M+ P TY I++ L + N + A F +
Sbjct: 335 TFNTMIHIYGNNGQLGEVTSLMKTMKLHCA-PDTRTYNILISLHTKNNDIERAGAYFKEM 393
Query: 193 LDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNY 252
D+ LKPD + ++Y + E+A L A M + V+ T ++L
Sbjct: 394 KDD---GLKPDPVSYRTLLYAFSIRHMVEEAEGLIAEMDDDNVEIDEYTQSALTRMYVEA 450
Query: 253 KEVSKIYDQMQRAGLQPD------------------------------------VVSYAL 276
+ + K + +R + + V+ Y +
Sbjct: 451 EMLEKSWSWFKRFHVAGNMSSEGYSANIDAYGERGYLSEAERVFICCQEVNKRTVIEYNV 510
Query: 277 LINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDR 336
+I AYG ++ E+A +FE M+ GV P YN L+ A + M + R + MR
Sbjct: 511 MIKAYGISKSCEKACELFESMMSYGVTPDKCTYNTLVQILASADMPHKGRCYLEKMRETG 570
Query: 337 CSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMM 396
D Y ++S++V + AE+ ++ + + P+V+ YG LI +A N+++ M
Sbjct: 571 YVSDCIPYCAVISSFVKLGQLNMAEEVYKEMVEYNIEPDVVVYGVLINAFADTGNVQQAM 630
Query: 397 EIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSA-VVWYKEMESCGFP--PDQKAKNILL 453
+ M+ GI N I+ +++ Y K D A ++ K ++SC PD N ++
Sbjct: 631 SYVEAMKEAGIPGNSVIYNSLIKLYTKVGYLDEAEAIYRKLLQSCNKTQYPDVYTSNCMI 690
Query: 454 SLAK-------------TADERNEANEL 468
+L + +R EANE
Sbjct: 691 NLYSERSMVRKAEAIFDSMKQRGEANEF 718
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 80/331 (24%), Positives = 157/331 (47%), Gaps = 20/331 (6%)
Query: 122 MNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANK 181
M+ +GY+ ++ +AYG G AE +F Q R + + Y +++K + +
Sbjct: 469 MSSEGYSANI-------DAYGERGYLSEAERVFICCQEVNKR-TVIEYNVMIKAYGISKS 520
Query: 182 FKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVT 241
++A E+F +++ + PD+ ++ ++ + A K R M E G +
Sbjct: 521 CEKACELFESMMS---YGVTPDKCTYNTLVQILASADMPHKGRCYLEKMRETGYVSDCIP 577
Query: 242 YNSLMSFETNYKEVS---KIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEML 298
Y +++S +++ ++Y +M ++PDVV Y +LINA+ ++A++ E M
Sbjct: 578 YCAVISSFVKLGQLNMAEEVYKEMVEYNIEPDVVVYGVLINAFADTGNVQQAMSYVEAMK 637
Query: 299 DAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCS----PDICSYTTMLSAYVNA 354
+AG+ YN L+ + G +D+A +++ + + C+ PD+ + M++ Y
Sbjct: 638 EAGIPGNSVIYNSLIKLYTKVGYLDEAEAIYRKLLQS-CNKTQYPDVYTSNCMINLYSER 696
Query: 355 SDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIF 414
S + AE F +KQ G N T+ ++ Y K E+ +I +MR I + +
Sbjct: 697 SMVRKAEAIFDSMKQRG-EANEFTFAMMLCMYKKNGRFEEATQIAKQMREMKILTDPLSY 755
Query: 415 TTIMDAYGKNKDFDSAVVWYKEMESCGFPPD 445
+++ + + F AV +KEM S G PD
Sbjct: 756 NSVLGLFALDGRFKEAVETFKEMVSSGIQPD 786
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 62/262 (23%), Positives = 119/262 (45%), Gaps = 2/262 (0%)
Query: 97 MDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRR 156
+ + +I+++ K G N AE+V M + P VV + L+ A+ G + A +
Sbjct: 576 IPYCAVISSFVKLGQLNMAEEVYKEMVEYNIEPDVVVYGVLINAFADTGNVQQAMSYVEA 635
Query: 157 MQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKK 216
M+ +G +++ Y ++KL+ + EAE ++ LL PD + MI +Y +
Sbjct: 636 MKEAGIPGNSVIYNSLIKLYTKVGYLDEAEAIYRKLLQSCNKTQYPDVYTSNCMINLYSE 695
Query: 217 AGGYEKARKLFALMAERGVQQSTVTYNSLMSFETN--YKEVSKIYDQMQRAGLQPDVVSY 274
KA +F M +RG L ++ N ++E ++I QM+ + D +SY
Sbjct: 696 RSMVRKAEAIFDSMKQRGEANEFTFAMMLCMYKKNGRFEEATQIAKQMREMKILTDPLSY 755
Query: 275 ALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRR 334
++ + R +EA+ F+EM+ +G++P + L GM +A + +R+
Sbjct: 756 NSVLGLFALDGRFKEAVETFKEMVSSGIQPDDSTFKSLGTILMKLGMSKKAVRKIEEIRK 815
Query: 335 DRCSPDICSYTTMLSAYVNASD 356
+ + + LS+ V D
Sbjct: 816 KEIKRGLELWISTLSSLVGIGD 837
Score = 47.8 bits (112), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 50/98 (51%), Gaps = 4/98 (4%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
NE F M++ Y K G F +A ++ M + +S+ +++ + GR+K A F
Sbjct: 716 NEFTFAMMLCMYKKNGRFEEATQIAKQMREMKILTDPLSYNSVLGLFALDGRFKEAVETF 775
Query: 155 RRMQSSGPRPSALTYQ----IILKLFVEANKFKEAEEV 188
+ M SSG +P T++ I++KL + ++ EE+
Sbjct: 776 KEMVSSGIQPDDSTFKSLGTILMKLGMSKKAVRKIEEI 813
>gi|449467169|ref|XP_004151297.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g21222-like [Cucumis sativus]
gi|449518833|ref|XP_004166440.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g21222-like [Cucumis sativus]
Length = 609
Score = 149 bits (375), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 85/324 (26%), Positives = 168/324 (51%), Gaps = 7/324 (2%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
L+ ++G +A+ + + + ++G+ P+ V++TAL+ A R R+K + M+ +G
Sbjct: 63 LMNILVERGKPQEAQFIFNSLVEQGHRPTTVTYTALVAALTRQKRFKAISGLLSEMEETG 122
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
+P ++ I+ F E+ KEA E+F + E+S KP F+ +I Y E
Sbjct: 123 IKPDSILLNAIINAFSESGNVKEAMEIFQKM---EESGCKPTTSTFNTLIKGYGIIRKPE 179
Query: 222 KARKLFALMAER-GVQQSTVTYNSL---MSFETNYKEVSKIYDQMQRAGLQPDVVSYALL 277
++ KL LM ++ + TYN L + + + KE + QM +G+QPDVV+Y L
Sbjct: 180 ESMKLLELMTRTTNLKPNNRTYNILVGALCKKKSIKEAWNVVHQMLASGVQPDVVTYNTL 239
Query: 278 INAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRC 337
AY + +A ++ +ML+ V P + I++ + G + +A V MR
Sbjct: 240 ARAYAQDGETNKAESIIVDMLNKKVNPNERTCGIIVGGYCEQGNLAEALRVVYRMRDLGI 299
Query: 338 SPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMME 397
P++ + +++ +++ D +G +K +++ G P+VIT+ T++ G++ ++K E
Sbjct: 300 HPNLVIFNSLIKGFLDIGDSDGVDKALTMMEESGVKPDVITFSTIMNGWSSAGRMDKCQE 359
Query: 398 IYDKMRVNGIKPNQTIFTTIMDAY 421
I+D M +GI+P+ +F+ + +
Sbjct: 360 IFDDMLKSGIEPDIHVFSILAKGF 383
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 93/348 (26%), Positives = 170/348 (48%), Gaps = 10/348 (2%)
Query: 130 SVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVF 189
+V S T LM G+ + A+ IF + G RP+ +TY ++ +FK
Sbjct: 56 TVRSRTKLMNILVERGKPQEAQFIFNSLVEQGHRPTTVTYTALVAALTRQKRFK----AI 111
Query: 190 MTLLDE-EKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLM-- 246
LL E E++ +KPD + + +I + ++G ++A ++F M E G + +T T+N+L+
Sbjct: 112 SGLLSEMEETGIKPDSILLNAIINAFSESGNVKEAMEIFQKMEESGCKPTTSTFNTLIKG 171
Query: 247 -SFETNYKEVSKIYDQMQRA-GLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRP 304
+E K+ + M R L+P+ +Y +L+ A K + +EA V +ML +GV+P
Sbjct: 172 YGIIRKPEESMKLLELMTRTTNLKPNNRTYNILVGALCKKKSIKEAWNVVHQMLASGVQP 231
Query: 305 THKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFF 364
YN L A+A G ++A ++ M + +P+ + ++ Y ++ A +
Sbjct: 232 DVVTYNTLARAYAQDGETNKAESIIVDMLNKKVNPNERTCGIIVGGYCEQGNLAEALRVV 291
Query: 365 RRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKN 424
R++ G PN++ + +LIKG+ + + + + + M +G+KP+ F+TIM+ +
Sbjct: 292 YRMRDLGIHPNLVIFNSLIKGFLDIGDSDGVDKALTMMEESGVKPDVITFSTIMNGWSSA 351
Query: 425 KDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNF 472
D + +M G PD +IL A E +A LL NF
Sbjct: 352 GRMDKCQEIFDDMLKSGIEPDIHVFSILAKGFVRAGEPVKAESLL-NF 398
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 76/327 (23%), Positives = 161/327 (49%), Gaps = 7/327 (2%)
Query: 99 FLMLITAYGKQGDFNKAEKVLSFMNKK-GYAPSVVSHTALMEAYGRGGRYKNAEAIFRRM 157
F LI YG ++ K+L M + P+ ++ L+ A + K A + +M
Sbjct: 165 FNTLIKGYGIIRKPEESMKLLELMTRTTNLKPNNRTYNILVGALCKKKSIKEAWNVVHQM 224
Query: 158 QSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKA 217
+SG +P +TY + + + + + +AE + + +L+++ + P+++ +++ Y +
Sbjct: 225 LASGVQPDVVTYNTLARAYAQDGETNKAESIIVDMLNKK---VNPNERTCGIIVGGYCEQ 281
Query: 218 GGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKE---VSKIYDQMQRAGLQPDVVSY 274
G +A ++ M + G+ + V +NSL+ + + V K M+ +G++PDV+++
Sbjct: 282 GNLAEALRVVYRMRDLGIHPNLVIFNSLIKGFLDIGDSDGVDKALTMMEESGVKPDVITF 341
Query: 275 ALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRR 334
+ ++N + A R ++ +F++ML +G+ P ++IL F +G +A ++ M +
Sbjct: 342 STIMNGWSSAGRMDKCQEIFDDMLKSGIEPDIHVFSILAKGFVRAGEPVKAESLLNFMSK 401
Query: 335 DRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEK 394
P++ +TT++S + A ME A K F + PN+ T+ TLI GY + +
Sbjct: 402 YGVRPNVVIFTTIISGWCTAGKMEKAWKVFEHMCDMDVSPNLKTFETLIWGYGEAKQPWR 461
Query: 395 MMEIYDKMRVNGIKPNQTIFTTIMDAY 421
EI M + P + + +A+
Sbjct: 462 AEEILQMMEEMNVVPENSTLKLVSEAW 488
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 96/422 (22%), Positives = 185/422 (43%), Gaps = 57/422 (13%)
Query: 97 MDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRR 156
+ + L+ A +Q F +LS M + G P + A++ A+ G K A IF++
Sbjct: 93 VTYTALVAALTRQKRFKAISGLLSEMEETGIKPDSILLNAIINAFSESGNVKEAMEIFQK 152
Query: 157 MQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLD--EEKSPLKPDQKMFHMMIYMY 214
M+ SG +P+ T+ ++K + K +E+ M LL+ + LKP+ + +++++
Sbjct: 153 MEESGCKPTTSTFNTLIKGYGIIRKPEES----MKLLELMTRTTNLKPNNRTYNILVGAL 208
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSLMSF-------------------------- 248
K ++A + M GVQ VTYN+L
Sbjct: 209 CKKKSIKEAWNVVHQMLASGVQPDVVTYNTLARAYAQDGETNKAESIIVDMLNKKVNPNE 268
Query: 249 ------------ETNYKEVSKIYDQMQRAGLQPDVVSYALLINAY---GKARREEEALAV 293
+ N E ++ +M+ G+ P++V + LI + G + ++AL +
Sbjct: 269 RTCGIIVGGYCEQGNLAEALRVVYRMRDLGIHPNLVIFNSLIKGFLDIGDSDGVDKALTM 328
Query: 294 FEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVN 353
EE +GV+P ++ +++ ++ +G +D+ + +F M + PDI ++ + +V
Sbjct: 329 MEE---SGVKPDVITFSTIMNGWSSAGRMDKCQEIFDDMLKSGIEPDIHVFSILAKGFVR 385
Query: 354 ASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTI 413
A + AE + + G PNV+ + T+I G+ +EK ++++ M + PN
Sbjct: 386 AGEPVKAESLLNFMSKYGVRPNVVIFTTIISGWCTAGKMEKAWKVFEHMCDMDVSPNLKT 445
Query: 414 FTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNIL----LSLAKTAD---ERNEAN 466
F T++ YG+ K A + ME P+ ++ S+ D ER E N
Sbjct: 446 FETLIWGYGEAKQPWRAEEILQMMEEMNVVPENSTLKLVSEAWRSIGMVNDAKAERTEEN 505
Query: 467 EL 468
E+
Sbjct: 506 EI 507
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 68/283 (24%), Positives = 135/283 (47%), Gaps = 6/283 (2%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + +L+ A K+ +A V+ M G P VV++ L AY + G AE+I
Sbjct: 197 NNRTYNILVGALCKKKSIKEAWNVVHQMLASGVQPDVVTYNTLARAYAQDGETNKAESII 256
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
M + P+ T II+ + E EA V + D + P+ +F+ +I +
Sbjct: 257 VDMLNKKVNPNERTCGIIVGGYCEQGNLAEALRVVYRMRD---LGIHPNLVIFNSLIKGF 313
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSK---IYDQMQRAGLQPDV 271
G + K +M E GV+ +T++++M+ ++ + K I+D M ++G++PD+
Sbjct: 314 LDIGDSDGVDKALTMMEESGVKPDVITFSTIMNGWSSAGRMDKCQEIFDDMLKSGIEPDI 373
Query: 272 VSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKC 331
+++L + +A +A ++ M GVRP + ++ + +G +++A VF+
Sbjct: 374 HVFSILAKGFVRAGEPVKAESLLNFMSKYGVRPNVVIFTTIISGWCTAGKMEKAWKVFEH 433
Query: 332 MRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVP 374
M SP++ ++ T++ Y A AE+ + +++ VP
Sbjct: 434 MCDMDVSPNLKTFETLIWGYGEAKQPWRAEEILQMMEEMNVVP 476
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 63/237 (26%), Positives = 103/237 (43%), Gaps = 45/237 (18%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + F LI + GD + +K L+ M + G P V++ + +M + GR + IF
Sbjct: 302 NLVIFNSLIKGFLDIGDSDGVDKALTMMEESGVKPDVITFSTIMNGWSSAGRMDKCQEIF 361
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEV--FMTLLDEEKSPLKPDQKMFHMMIY 212
M SG P + I+ K FV A + +AE + FM+ K ++P+ +F +I
Sbjct: 362 DDMLKSGIEPDIHVFSILAKGFVRAGEPVKAESLLNFMS-----KYGVRPNVVIFTTIIS 416
Query: 213 MYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSKIYDQMQRAGLQPDVV 272
+ AG EKA K+F M + V P++
Sbjct: 417 GWCTAGKMEKAWKVFEHMCDMDV--------------------------------SPNLK 444
Query: 273 SYALLINAYGKAR---REEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQAR 326
++ LI YG+A+ R EE L + EEM V P + ++ +A+ GMV+ A+
Sbjct: 445 TFETLIWGYGEAKQPWRAEEILQMMEEM---NVVPENSTLKLVSEAWRSIGMVNDAK 498
>gi|357505881|ref|XP_003623229.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355498244|gb|AES79447.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 770
Score = 149 bits (375), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 106/420 (25%), Positives = 192/420 (45%), Gaps = 8/420 (1%)
Query: 99 FLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQ 158
+ +L K G + A KVL M K+G P+ V++ A++ + GR +A I M
Sbjct: 307 YTVLADGLSKNGRASDAIKVLDLMVKRGEEPNNVTYNAIINGLCKEGRVDDALGILETMA 366
Query: 159 SSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAG 218
G +P +TY ++K K EA ++ L+ +E +KPD F+++I K
Sbjct: 367 KKGKKPDVVTYSTLVKGLCGVGKIDEAVDLLNLLMSKEFH-IKPDVFAFNLVIQELCKQR 425
Query: 219 GYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSKIYDQMQRA---GLQPDVVSYA 275
A++++ M ERG + VTYN L+ + +++K + + A G+ P+ +Y
Sbjct: 426 RLRHAKRVYYTMVERGFPSNIVTYNILIDGYLSAGKLTKALELWKDAVDSGISPNAATYT 485
Query: 276 LLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRD 335
+LIN K + A +F + +G RPT YN L+ + V+QAR +F+ MR
Sbjct: 486 VLINGLCKMQMLSIAKGLFNKKRASGTRPTVSEYNTLMASLCRESSVEQARNLFQEMRNA 545
Query: 336 RCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKM 395
PD+ S+ ++ + A D+E A++ + VP+ IT+ LI + K+ L++
Sbjct: 546 NHDPDVVSFNIIIDGTLKAGDVESAKELLLEMLNMNLVPDNITFSILINRFLKLGQLDEA 605
Query: 396 MEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSL 455
+Y++M G P+ +F +++ Y + V ++M D K + +L+
Sbjct: 606 ASLYERMVSCGHVPDAVLFDSLLKGYSLKGKTEKVVSMLQQMADKDVVLDSKLTSTILAC 665
Query: 456 AKTADERNEANELLGNFNHPNNEPGINGLSISVDEEDDDDDDDEDDDDNIYHDGDGDGDG 515
+ + ++L F+ + G SI +E + D+ NI G G
Sbjct: 666 LCNMSKDVDIEKILPKFSQHTSV----GASIKCNELLMKLNKVHPDNANILVANTAMGTG 721
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 85/364 (23%), Positives = 168/364 (46%), Gaps = 8/364 (2%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + F LI + K GD + +L M K G V ++AL+ + G + + +F
Sbjct: 198 NSVTFSALIDGFCKNGDVEEGFGLLEEMEKMGLEGDVFVYSALISGFCSKGDIERGKELF 257
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
M P+ +TY ++ + K+KEA ++ T+ ++PD + ++
Sbjct: 258 NEMLRKNVTPNVVTYSCLMNALCKKQKWKEAAQMLDTM---TGCKVRPDVVAYTVLADGL 314
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSL---MSFETNYKEVSKIYDQMQRAGLQPDV 271
K G A K+ LM +RG + + VTYN++ + E + I + M + G +PDV
Sbjct: 315 SKNGRASDAIKVLDLMVKRGEEPNNVTYNAIINGLCKEGRVDDALGILETMAKKGKKPDV 374
Query: 272 VSYALLINAYGKARREEEALAVFEEML--DAGVRPTHKAYNILLDAFAISGMVDQARTVF 329
V+Y+ L+ + +EA+ + ++ + ++P A+N+++ + A+ V+
Sbjct: 375 VTYSTLVKGLCGVGKIDEAVDLLNLLMSKEFHIKPDVFAFNLVIQELCKQRRLRHAKRVY 434
Query: 330 KCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKV 389
M +I +Y ++ Y++A + A + ++ G PN TY LI G K+
Sbjct: 435 YTMVERGFPSNIVTYNILIDGYLSAGKLTKALELWKDAVDSGISPNAATYTVLINGLCKM 494
Query: 390 NNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAK 449
L +++K R +G +P + + T+M + + + A ++EM + PD +
Sbjct: 495 QMLSIAKGLFNKKRASGTRPTVSEYNTLMASLCRESSVEQARNLFQEMRNANHDPDVVSF 554
Query: 450 NILL 453
NI++
Sbjct: 555 NIII 558
Score = 95.1 bits (235), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 73/344 (21%), Positives = 150/344 (43%), Gaps = 6/344 (1%)
Query: 129 PSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEV 188
PS S L++ + Y + ++ +M S P + +++ FV K A V
Sbjct: 57 PSYSSCNTLIDNLRKAKHYDHVISVHSKMASVSVFPCFTSLSALIESFVNTQKPSFAFGV 116
Query: 189 FMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSF 248
++ K + F++++ + ++G KA LF +M + V+YN++++
Sbjct: 117 LGLIM---KRGFHLNVYNFNLLLKGFCQSGDSHKAMDLFCMMKRNCLIPDCVSYNTVING 173
Query: 249 ETNYK---EVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPT 305
K E +++ +M+ +P+ V+++ LI+ + K EE + EEM G+
Sbjct: 174 LCKGKRLVEAKELFKEMKGGECKPNSVTFSALIDGFCKNGDVEEGFGLLEEMEKMGLEGD 233
Query: 306 HKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFR 365
Y+ L+ F G +++ + +F M R +P++ +Y+ +++A + A +
Sbjct: 234 VFVYSALISGFCSKGDIERGKELFNEMLRKNVTPNVVTYSCLMNALCKKQKWKEAAQMLD 293
Query: 366 RLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNK 425
+ P+V+ Y L G +K +++ D M G +PN + I++ K
Sbjct: 294 TMTGCKVRPDVVAYTVLADGLSKNGRASDAIKVLDLMVKRGEEPNNVTYNAIINGLCKEG 353
Query: 426 DFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELL 469
D A+ + M G PD + L+ + +EA +LL
Sbjct: 354 RVDDALGILETMAKKGKKPDVVTYSTLVKGLCGVGKIDEAVDLL 397
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 48/239 (20%), Positives = 104/239 (43%)
Query: 251 NYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYN 310
+Y V ++ +M + P S + LI ++ ++ A V ++ G +N
Sbjct: 74 HYDHVISVHSKMASVSVFPCFTSLSALIESFVNTQKPSFAFGVLGLIMKRGFHLNVYNFN 133
Query: 311 ILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQD 370
+LL F SG +A +F M+R+ PD SY T+++ + A++ F+ +K
Sbjct: 134 LLLKGFCQSGDSHKAMDLFCMMKRNCLIPDCVSYNTVINGLCKGKRLVEAKELFKEMKGG 193
Query: 371 GFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSA 430
PN +T+ LI G+ K ++E+ + ++M G++ + +++ ++ + D +
Sbjct: 194 ECKPNSVTFSALIDGFCKNGDVEEGFGLLEEMEKMGLEGDVFVYSALISGFCSKGDIERG 253
Query: 431 VVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGINGLSISVD 489
+ EM P+ + L++ + EA ++L P + ++ D
Sbjct: 254 KELFNEMLRKNVTPNVVTYSCLMNALCKKQKWKEAAQMLDTMTGCKVRPDVVAYTVLAD 312
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 75/357 (21%), Positives = 154/357 (43%), Gaps = 13/357 (3%)
Query: 41 VGSAVAVLRSERTRGQPLPKDLVLGTLVRLKQLKKWNVVSEVLEWLRIQSWWDFN----E 96
V A+ +L + +G+ P + TLV K L + E ++ L + +F+
Sbjct: 355 VDDALGILETMAKKGKK-PDVVTYSTLV--KGLCGVGKIDEAVDLLNLLMSKEFHIKPDV 411
Query: 97 MDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRR 156
F ++I KQ A++V M ++G+ ++V++ L++ Y G+ A +++
Sbjct: 412 FAFNLVIQELCKQRRLRHAKRVYYTMVERGFPSNIVTYNILIDGYLSAGKLTKALELWKD 471
Query: 157 MQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKK 216
SG P+A TY +++ + A+ +F + S +P ++ ++ +
Sbjct: 472 AVDSGISPNAATYTVLINGLCKMQMLSIAKGLFN---KKRASGTRPTVSEYNTLMASLCR 528
Query: 217 AGGYEKARKLFALMAERGVQQSTVTYNSLM--SFETNYKEVSKIYDQMQRAGLQ-PDVVS 273
E+AR LF M V++N ++ + + E +K PD ++
Sbjct: 529 ESSVEQARNLFQEMRNANHDPDVVSFNIIIDGTLKAGDVESAKELLLEMLNMNLVPDNIT 588
Query: 274 YALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMR 333
+++LIN + K + +EA +++E M+ G P ++ LL +++ G ++ ++ + M
Sbjct: 589 FSILINRFLKLGQLDEAASLYERMVSCGHVPDAVLFDSLLKGYSLKGKTEKVVSMLQQMA 648
Query: 334 RDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVN 390
D +T+L+ N S EK + Q V I L+ KV+
Sbjct: 649 DKDVVLDSKLTSTILACLCNMSKDVDIEKILPKFSQHTSVGASIKCNELLMKLNKVH 705
>gi|224135699|ref|XP_002322139.1| predicted protein [Populus trichocarpa]
gi|222869135|gb|EEF06266.1| predicted protein [Populus trichocarpa]
Length = 866
Score = 149 bits (375), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 102/409 (24%), Positives = 174/409 (42%), Gaps = 40/409 (9%)
Query: 76 WNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHT 135
W + + ++ Q W NE + ++I+ G++G K + M G + SV S+T
Sbjct: 123 WQRSLRLFKHMQRQIWCKPNEHIYTIMISLLGREGLLEKCSDIFEEMGAHGVSRSVFSYT 182
Query: 136 ALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDE 195
AL+ +YGR G+Y+ + + RM+ PS LTY ++ LD
Sbjct: 183 ALINSYGRNGKYEVSLELLERMKKERVSPSILTYNTVINSCARGG------------LD- 229
Query: 196 EKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYK-- 253
+E LFA M G+Q VTYN+L+ +N
Sbjct: 230 ------------------------WEGLLGLFAEMRHEGIQPDIVTYNTLLCACSNRGLG 265
Query: 254 -EVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNIL 312
E ++ M G+ PD+ +Y L++ +GK R ++ + +EM G P +YN+L
Sbjct: 266 DEAEMVFRTMNEGGVVPDITTYTYLVDTFGKLNRLDKVSELLKEMASTGNVPEISSYNVL 325
Query: 313 LDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGF 372
L+A+A G ++ A VF+ M+ C P+ +Y+ +L Y + + F +K
Sbjct: 326 LEAYARIGNIEDATGVFRLMQEAGCVPNAETYSILLGLYGKHGRYDEVRELFLEMKVSNT 385
Query: 373 VPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVV 432
P+ TY TLI + + ++++ ++ M ++PN + ++ A GK D A
Sbjct: 386 EPDAATYNTLIDVFGEGGYFKEVVTLFHDMAEENVEPNMETYEGLIFACGKGGLHDDAKK 445
Query: 433 WYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGI 481
M G P KA ++ A EA L N ++P I
Sbjct: 446 ILLHMSEKGMIPSSKAYTGVIEAYGQAAMYEEALVTLNTMNEMGSKPTI 494
Score = 142 bits (359), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 93/399 (23%), Positives = 191/399 (47%), Gaps = 8/399 (2%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
L+ A +G ++AE V MN+ G P + ++T L++ +G+ R + + M S+G
Sbjct: 255 LLCACSNRGLGDEAEMVFRTMNEGGVVPDITTYTYLVDTFGKLNRLDKVSELLKEMASTG 314
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
P +Y ++L+ + ++A VF + +++ P+ + + +++ +Y K G Y+
Sbjct: 315 NVPEISSYNVLLEAYARIGNIEDATGVFRLM---QEAGCVPNAETYSILLGLYGKHGRYD 371
Query: 222 KARKLFALMAERGVQQSTVTYNSLMSF--ETNY-KEVSKIYDQMQRAGLQPDVVSYALLI 278
+ R+LF M + TYN+L+ E Y KEV ++ M ++P++ +Y LI
Sbjct: 372 EVRELFLEMKVSNTEPDAATYNTLIDVFGEGGYFKEVVTLFHDMAEENVEPNMETYEGLI 431
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCS 338
A GK ++A + M + G+ P+ KAY +++A+ + M ++A M
Sbjct: 432 FACGKGGLHDDAKKILLHMSEKGMIPSSKAYTGVIEAYGQAAMYEEALVTLNTMNEMGSK 491
Query: 339 PDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEI 398
P I +Y T++ + + E ++ G ++ +I+G+ + E+ ++
Sbjct: 492 PTIETYNTLIYMFARGGLYKETEAILLKMGDFGVARERDSFNGVIEGFRQGGQFEEAIKA 551
Query: 399 YDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKT 458
Y +M + + P++ ++ Y D +V ++E+++ G P+ ++L++
Sbjct: 552 YVEMEKSRLVPDERTLEAVLSVYCIAGLVDESVEQFQEIKASGILPNVMCYCMMLAVYAK 611
Query: 459 ADERNEANELLGNF--NHPNNEPGINGLSISVDEEDDDD 495
+D NEA ELL N +N + G I D +DD +
Sbjct: 612 SDRWNEAYELLDEMLTNRASNIHQVIGQMIKGDFDDDSN 650
Score = 131 bits (329), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 99/406 (24%), Positives = 182/406 (44%), Gaps = 36/406 (8%)
Query: 98 DFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGR-YKNAEAIFRR 156
+ LI +YG+ G + + ++L M K+ +PS++++ ++ + RGG ++ +F
Sbjct: 180 SYTALINSYGRNGKYEVSLELLERMKKERVSPSILTYNTVINSCARGGLDWEGLLGLFAE 239
Query: 157 MQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTL------------------------ 192
M+ G +P +TY +L EAE VF T+
Sbjct: 240 MRHEGIQPDIVTYNTLLCACSNRGLGDEAEMVFRTMNEGGVVPDITTYTYLVDTFGKLNR 299
Query: 193 LDEEKSPLK--------PDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNS 244
LD+ LK P+ +++++ Y + G E A +F LM E G + TY+
Sbjct: 300 LDKVSELLKEMASTGNVPEISSYNVLLEAYARIGNIEDATGVFRLMQEAGCVPNAETYSI 359
Query: 245 LMSF---ETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAG 301
L+ Y EV +++ +M+ + +PD +Y LI+ +G+ +E + +F +M +
Sbjct: 360 LLGLYGKHGRYDEVRELFLEMKVSNTEPDAATYNTLIDVFGEGGYFKEVVTLFHDMAEEN 419
Query: 302 VRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAE 361
V P + Y L+ A G+ D A+ + M P +YT ++ AY A+ E A
Sbjct: 420 VEPNMETYEGLIFACGKGGLHDDAKKILLHMSEKGMIPSSKAYTGVIEAYGQAAMYEEAL 479
Query: 362 KFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAY 421
+ + G P + TY TLI +A+ ++ I KM G+ + F +++ +
Sbjct: 480 VTLNTMNEMGSKPTIETYNTLIYMFARGGLYKETEAILLKMGDFGVARERDSFNGVIEGF 539
Query: 422 GKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANE 467
+ F+ A+ Y EME PD++ +LS+ A +E+ E
Sbjct: 540 RQGGQFEEAIKAYVEMEKSRLVPDERTLEAVLSVYCIAGLVDESVE 585
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 86/377 (22%), Positives = 166/377 (44%), Gaps = 43/377 (11%)
Query: 98 DFLMLITAYGKQGDFNKAEKVLSFMNKKGYA-PSVVSHTALMEAYGRGGRYKNAEAIFRR 156
DF ++ + ++GD+ ++ ++ M ++ + P+ +T ++ GR G + IF
Sbjct: 109 DFALVFKEFAQRGDWQRSLRLFKHMQRQIWCKPNEHIYTIMISLLGREGLLEKCSDIFEE 168
Query: 157 MQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKK 216
M + G S +Y +I Y +
Sbjct: 169 MGAHGVSRSVFSYT--------------------------------------ALINSYGR 190
Query: 217 AGGYEKARKLFALMAERGVQQSTVTYNSLMSFET----NYKEVSKIYDQMQRAGLQPDVV 272
G YE + +L M + V S +TYN++++ +++ + ++ +M+ G+QPD+V
Sbjct: 191 NGKYEVSLELLERMKKERVSPSILTYNTVINSCARGGLDWEGLLGLFAEMRHEGIQPDIV 250
Query: 273 SYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCM 332
+Y L+ A +EA VF M + GV P Y L+D F +D+ + K M
Sbjct: 251 TYNTLLCACSNRGLGDEAEMVFRTMNEGGVVPDITTYTYLVDTFGKLNRLDKVSELLKEM 310
Query: 333 RRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNL 392
P+I SY +L AY ++E A FR +++ G VPN TY L+ Y K
Sbjct: 311 ASTGNVPEISSYNVLLEAYARIGNIEDATGVFRLMQEAGCVPNAETYSILLGLYGKHGRY 370
Query: 393 EKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNIL 452
+++ E++ +M+V+ +P+ + T++D +G+ F V + +M P+ + L
Sbjct: 371 DEVRELFLEMKVSNTEPDAATYNTLIDVFGEGGYFKEVVTLFHDMAEENVEPNMETYEGL 430
Query: 453 LSLAKTADERNEANELL 469
+ ++A ++L
Sbjct: 431 IFACGKGGLHDDAKKIL 447
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 46/218 (21%), Positives = 102/218 (46%), Gaps = 2/218 (0%)
Query: 274 YALLINAYGKARREEEALAVFEEM-LDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCM 332
+AL+ + + + +L +F+ M +P Y I++ G++++ +F+ M
Sbjct: 110 FALVFKEFAQRGDWQRSLRLFKHMQRQIWCKPNEHIYTIMISLLGREGLLEKCSDIFEEM 169
Query: 333 RRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVN-N 391
S + SYT ++++Y E + + R+K++ P+++TY T+I A+ +
Sbjct: 170 GAHGVSRSVFSYTALINSYGRNGKYEVSLELLERMKKERVSPSILTYNTVINSCARGGLD 229
Query: 392 LEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNI 451
E ++ ++ +MR GI+P+ + T++ A D A + ++ M G PD
Sbjct: 230 WEGLLGLFAEMRHEGIQPDIVTYNTLLCACSNRGLGDEAEMVFRTMNEGGVVPDITTYTY 289
Query: 452 LLSLAKTADERNEANELLGNFNHPNNEPGINGLSISVD 489
L+ + ++ +ELL N P I+ ++ ++
Sbjct: 290 LVDTFGKLNRLDKVSELLKEMASTGNVPEISSYNVLLE 327
>gi|356513139|ref|XP_003525271.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g21222-like [Glycine max]
Length = 621
Score = 149 bits (375), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 95/351 (27%), Positives = 172/351 (49%), Gaps = 13/351 (3%)
Query: 130 SVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVF 189
+V + T LM A G+ A+A+F + G +P+ +TY ++ +FK +
Sbjct: 59 TVHARTKLMNALIGKGKPHEAQAVFHNLTEEGHKPTLITYTTLVAALTRQKRFKSIPALL 118
Query: 190 MTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFE 249
+ D + +KPD + + MI + +G ++A K+F M E G + +T TYN+L+
Sbjct: 119 SKVAD---NGMKPDSILLNAMINAFSDSGKVDEAMKIFQKMKEYGCKPTTSTYNTLIK-- 173
Query: 250 TNYKEVSKIYDQM-------QRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGV 302
+ V + Y+ M Q ++P+ +Y +LI A+ ++ EEA V +M+ +G+
Sbjct: 174 -GFGIVGRPYESMKLLEMMGQDENVKPNDRTYNILIQAWCTKKKLEEAWNVLHKMVASGI 232
Query: 303 RPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEK 362
+P YN + A+A +G ++A + M+ ++ P+ + ++S Y +M A +
Sbjct: 233 QPDVVTYNTMARAYAQNGETEKAERLILKMQYNKVKPNERTCGIIISGYCKEGNMTEALR 292
Query: 363 FFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYG 422
F R+K+ G PN + + +LIKGY + + E M GIKP+ F+TIM+A+
Sbjct: 293 FLYRMKELGVHPNPVVFNSLIKGYLDATDTNGVDEALTLMEEFGIKPDVVTFSTIMNAWS 352
Query: 423 KNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFN 473
D+ + +M G PD A +IL A + +A LL + +
Sbjct: 353 SAGLMDNCEEIFNDMVKAGIEPDIHAYSILAKGYVRAGQPRKAESLLTSMS 403
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 98/400 (24%), Positives = 181/400 (45%), Gaps = 13/400 (3%)
Query: 97 MDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRR 156
+ + L+ A +Q F +LS + G P + A++ A+ G+ A IF++
Sbjct: 96 ITYTTLVAALTRQKRFKSIPALLSKVADNGMKPDSILLNAMINAFSDSGKVDEAMKIFQK 155
Query: 157 MQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKK 216
M+ G +P+ TY ++K F + E+ ++ + +E +KP+ + ++++I +
Sbjct: 156 MKEYGCKPTTSTYNTLIKGFGIVGRPYESMKLLEMMGQDEN--VKPNDRTYNILIQAWCT 213
Query: 217 AGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSK---IYDQMQRAGLQPDVVS 273
E+A + M G+Q VTYN++ E K + +MQ ++P+ +
Sbjct: 214 KKKLEEAWNVLHKMVASGIQPDVVTYNTMARAYAQNGETEKAERLILKMQYNKVKPNERT 273
Query: 274 YALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNIL----LDAFAISGMVDQARTVF 329
++I+ Y K EAL M + GV P +N L LDA +G VD+A T+
Sbjct: 274 CGIIISGYCKEGNMTEALRFLYRMKELGVHPNPVVFNSLIKGYLDATDTNG-VDEALTL- 331
Query: 330 KCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKV 389
M PD+ +++T+++A+ +A M+ E+ F + + G P++ Y L KGY +
Sbjct: 332 --MEEFGIKPDVVTFSTIMNAWSSAGLMDNCEEIFNDMVKAGIEPDIHAYSILAKGYVRA 389
Query: 390 NNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAK 449
K + M G++ N IFTTI+ + D A ++M G P+ K
Sbjct: 390 GQPRKAESLLTSMSKYGVQTNVVIFTTIISGWCAAGKMDRAFSLCEKMHEMGTSPNLKTY 449
Query: 450 NILLSLAKTADERNEANELLGNFNHPNNEPGINGLSISVD 489
L+ A + +A E+L P ++ + + D
Sbjct: 450 ETLIWGYGEAKQPWKAEEILSTMEERGVVPEMSTMQLVAD 489
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 81/324 (25%), Positives = 162/324 (50%), Gaps = 7/324 (2%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNK-KGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSS 160
LI +G G ++ K+L M + + P+ ++ L++A+ + + A + +M +S
Sbjct: 171 LIKGFGIVGRPYESMKLLEMMGQDENVKPNDRTYNILIQAWCTKKKLEEAWNVLHKMVAS 230
Query: 161 GPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGY 220
G +P +TY + + + + + ++AE + + + + + +KP+++ ++I Y K G
Sbjct: 231 GIQPDVVTYNTMARAYAQNGETEKAERLILKM---QYNKVKPNERTCGIIISGYCKEGNM 287
Query: 221 EKARKLFALMAERGVQQSTVTYNSLMSF---ETNYKEVSKIYDQMQRAGLQPDVVSYALL 277
+A + M E GV + V +NSL+ T+ V + M+ G++PDVV+++ +
Sbjct: 288 TEALRFLYRMKELGVHPNPVVFNSLIKGYLDATDTNGVDEALTLMEEFGIKPDVVTFSTI 347
Query: 278 INAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRC 337
+NA+ A + +F +M+ AG+ P AY+IL + +G +A ++ M +
Sbjct: 348 MNAWSSAGLMDNCEEIFNDMVKAGIEPDIHAYSILAKGYVRAGQPRKAESLLTSMSKYGV 407
Query: 338 SPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMME 397
++ +TT++S + A M+ A ++ + G PN+ TY TLI GY + K E
Sbjct: 408 QTNVVIFTTIISGWCAAGKMDRAFSLCEKMHEMGTSPNLKTYETLIWGYGEAKQPWKAEE 467
Query: 398 IYDKMRVNGIKPNQTIFTTIMDAY 421
I M G+ P + + DA+
Sbjct: 468 ILSTMEERGVVPEMSTMQLVADAW 491
Score = 128 bits (322), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 92/375 (24%), Positives = 170/375 (45%), Gaps = 13/375 (3%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRM-QSS 160
+I A+ G ++A K+ M + G P+ ++ L++ +G GR + + M Q
Sbjct: 136 MINAFSDSGKVDEAMKIFQKMKEYGCKPTTSTYNTLIKGFGIVGRPYESMKLLEMMGQDE 195
Query: 161 GPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGY 220
+P+ TY I+++ + K +EA V ++ S ++PD ++ M Y + G
Sbjct: 196 NVKPNDRTYNILIQAWCTKKKLEEAWNVLHKMV---ASGIQPDVVTYNTMARAYAQNGET 252
Query: 221 EKARKLFALMAERGVQQSTVTYNSLMSF---ETNYKEVSKIYDQMQRAGLQPDVVSYALL 277
EKA +L M V+ + T ++S E N E + +M+ G+ P+ V + L
Sbjct: 253 EKAERLILKMQYNKVKPNERTCGIIISGYCKEGNMTEALRFLYRMKELGVHPNPVVFNSL 312
Query: 278 INAYGKARRE---EEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRR 334
I Y A +EAL + EE G++P ++ +++A++ +G++D +F M +
Sbjct: 313 IKGYLDATDTNGVDEALTLMEEF---GIKPDVVTFSTIMNAWSSAGLMDNCEEIFNDMVK 369
Query: 335 DRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEK 394
PDI +Y+ + YV A AE + + G NV+ + T+I G+ +++
Sbjct: 370 AGIEPDIHAYSILAKGYVRAGQPRKAESLLTSMSKYGVQTNVVIFTTIISGWCAAGKMDR 429
Query: 395 MMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLS 454
+ +KM G PN + T++ YG+ K A ME G P+ ++
Sbjct: 430 AFSLCEKMHEMGTSPNLKTYETLIWGYGEAKQPWKAEEILSTMEERGVVPEMSTMQLVAD 489
Query: 455 LAKTADERNEANELL 469
+ EAN +L
Sbjct: 490 AWRAIGLFKEANRIL 504
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/238 (23%), Positives = 96/238 (40%), Gaps = 41/238 (17%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + F LI Y D N ++ L+ M + G P VV+ + +M A+ G N E IF
Sbjct: 305 NPVVFNSLIKGYLDATDTNGVDEALTLMEEFGIKPDVVTFSTIMNAWSSAGLMDNCEEIF 364
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
M +G P Y I+ K +V A
Sbjct: 365 NDMVKAGIEPDIHAYSILAKGYVRA----------------------------------- 389
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSKIY---DQMQRAGLQPDV 271
G KA L M++ GVQ + V + +++S ++ + + ++M G P++
Sbjct: 390 ---GQPRKAESLLTSMSKYGVQTNVVIFTTIISGWCAAGKMDRAFSLCEKMHEMGTSPNL 446
Query: 272 VSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVF 329
+Y LI YG+A++ +A + M + GV P ++ DA+ G+ +A +
Sbjct: 447 KTYETLIWGYGEAKQPWKAEEILSTMEERGVVPEMSTMQLVADAWRAIGLFKEANRIL 504
>gi|218197756|gb|EEC80183.1| hypothetical protein OsI_22045 [Oryza sativa Indica Group]
Length = 577
Score = 149 bits (375), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 84/339 (24%), Positives = 171/339 (50%), Gaps = 8/339 (2%)
Query: 106 YGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAI--FRRMQSSGPR 163
Y + G F+ A ++L M + P +VS L+ A + G A+ ++ +G R
Sbjct: 4 YARSGRFDDARQLLDAMRDQDIEPDLVSFNTLINARAKSGCLAAGVALELLHEVRQAGLR 63
Query: 164 PSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKA 223
P A+TY ++ + + +A VF ++ E +PD ++ M+ ++ + G ++A
Sbjct: 64 PDAITYNTLISACSQGSNLDDAVAVFEEMIASE---CRPDLWTYNAMVSVHGRCGKAQEA 120
Query: 224 RKLFALMAERGVQQSTVTYNSLM---SFETNYKEVSKIYDQMQRAGLQPDVVSYALLINA 280
+F + E+G Q VTYNSL+ + E + + V ++ +++ +AG + D ++Y +I+
Sbjct: 121 ELMFKELVEKGFQPDAVTYNSLLYAFAKEGDVERVERVCEELVKAGFRKDGITYNTMIHM 180
Query: 281 YGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPD 340
YGK R + AL +++EM G P Y +L+D+ + +A V + M P
Sbjct: 181 YGKMGRLDLALGLYDEMRAIGCTPDAVTYTVLVDSLGKMDRISEAGKVLEEMADAGLKPT 240
Query: 341 ICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYD 400
+ +++ ++ AY + + AE+ F R+ + G P+ + Y ++ +A+ + K+M +Y
Sbjct: 241 LVTFSALICAYAKSGRQDDAERTFDRMVESGVKPDRLAYLVMLDVFARSDETRKLMVLYR 300
Query: 401 KMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMES 439
M +G KP+ ++ ++ A K + D ++ME+
Sbjct: 301 AMIKDGYKPDDGLYQVLLAALAKGNEHDEIEGVIQDMEA 339
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 67/237 (28%), Positives = 125/237 (52%), Gaps = 5/237 (2%)
Query: 213 MYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVS-----KIYDQMQRAGL 267
+Y ++G ++ AR+L M ++ ++ V++N+L++ ++ ++ ++++AGL
Sbjct: 3 VYARSGRFDDARQLLDAMRDQDIEPDLVSFNTLINARAKSGCLAAGVALELLHEVRQAGL 62
Query: 268 QPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQART 327
+PD ++Y LI+A + ++A+AVFEEM+ + RP YN ++ G +A
Sbjct: 63 RPDAITYNTLISACSQGSNLDDAVAVFEEMIASECRPDLWTYNAMVSVHGRCGKAQEAEL 122
Query: 328 VFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYA 387
+FK + PD +Y ++L A+ D+E E+ L + GF + ITY T+I Y
Sbjct: 123 MFKELVEKGFQPDAVTYNSLLYAFAKEGDVERVERVCEELVKAGFRKDGITYNTMIHMYG 182
Query: 388 KVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPP 444
K+ L+ + +YD+MR G P+ +T ++D+ GK A +EM G P
Sbjct: 183 KMGRLDLALGLYDEMRAIGCTPDAVTYTVLVDSLGKMDRISEAGKVLEEMADAGLKP 239
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 83/312 (26%), Positives = 153/312 (49%), Gaps = 7/312 (2%)
Query: 77 NVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTA 136
V E+L +R Q+ + + + LI+A + + + A V M P + ++ A
Sbjct: 48 GVALELLHEVR-QAGLRPDAITYNTLISACSQGSNLDDAVAVFEEMIASECRPDLWTYNA 106
Query: 137 LMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEE 196
++ +GR G+ + AE +F+ + G +P A+TY +L F + + E V L+
Sbjct: 107 MVSVHGRCGKAQEAELMFKELVEKGFQPDAVTYNSLLYAFAKEGDVERVERVCEELV--- 163
Query: 197 KSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSL---MSFETNYK 253
K+ + D ++ MI+MY K G + A L+ M G VTY L +
Sbjct: 164 KAGFRKDGITYNTMIHMYGKMGRLDLALGLYDEMRAIGCTPDAVTYTVLVDSLGKMDRIS 223
Query: 254 EVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILL 313
E K+ ++M AGL+P +V+++ LI AY K+ R+++A F+ M+++GV+P AY ++L
Sbjct: 224 EAGKVLEEMADAGLKPTLVTFSALICAYAKSGRQDDAERTFDRMVESGVKPDRLAYLVML 283
Query: 314 DAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFV 373
D FA S + +++ M +D PD Y +L+A ++ + E + ++ +
Sbjct: 284 DVFARSDETRKLMVLYRAMIKDGYKPDDGLYQVLLAALAKGNEHDEIEGVIQDMEAVFEM 343
Query: 374 PNVITYGTLIKG 385
++ LIK
Sbjct: 344 NPLVISSILIKA 355
Score = 115 bits (289), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 72/262 (27%), Positives = 125/262 (47%), Gaps = 4/262 (1%)
Query: 252 YKEVSKIYDQMQRAGLQPDVVSYALLINAYGKA--RREEEALAVFEEMLDAGVRPTHKAY 309
+ + ++ D M+ ++PD+VS+ LINA K+ AL + E+ AG+RP Y
Sbjct: 10 FDDARQLLDAMRDQDIEPDLVSFNTLINARAKSGCLAAGVALELLHEVRQAGLRPDAITY 69
Query: 310 NILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQ 369
N L+ A + +D A VF+ M C PD+ +Y M+S + + AE F+ L +
Sbjct: 70 NTLISACSQGSNLDDAVAVFEEMIASECRPDLWTYNAMVSVHGRCGKAQEAELMFKELVE 129
Query: 370 DGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDS 429
GF P+ +TY +L+ +AK ++E++ + +++ G + + + T++ YGK D
Sbjct: 130 KGFQPDAVTYNSLLYAFAKEGDVERVERVCEELVKAGFRKDGITYNTMIHMYGKMGRLDL 189
Query: 430 AVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGINGLS--IS 487
A+ Y EM + G PD +L+ D +EA ++L +P + S I
Sbjct: 190 ALGLYDEMRAIGCTPDAVTYTVLVDSLGKMDRISEAGKVLEEMADAGLKPTLVTFSALIC 249
Query: 488 VDEEDDDDDDDEDDDDNIYHDG 509
+ DD E D + G
Sbjct: 250 AYAKSGRQDDAERTFDRMVESG 271
>gi|302757495|ref|XP_002962171.1| hypothetical protein SELMODRAFT_77736 [Selaginella moellendorffii]
gi|300170830|gb|EFJ37431.1| hypothetical protein SELMODRAFT_77736 [Selaginella moellendorffii]
Length = 731
Score = 149 bits (375), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 110/396 (27%), Positives = 186/396 (46%), Gaps = 14/396 (3%)
Query: 70 LKQLKKWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAP 129
L + + W EV W + Q ++ N + +L+ G+ + +K S M + P
Sbjct: 91 LSEQRDWRKAIEVFSWFQRQDNYEANVFLYNILLRTLGRAAKWELLQKYWSEMLGERVPP 150
Query: 130 SVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVF 189
++ +++ L++ +GR G A +R M SG P + + L +EAE+ F
Sbjct: 151 TIFTYSILVDVHGRAGMKDEAIRFYRHMIESGVEPDEVMVSTYMNLQRRFGDLEEAEKAF 210
Query: 190 MTLLDEE------KSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYN 243
L E K P P+ F+ MI Y + + +A K+FA M + GV+ +TVT+N
Sbjct: 211 WGLFSENLVDGTTKRPENPET--FNTMISFYGEHAKFAEASKVFAEMMKAGVELTTVTFN 268
Query: 244 SLMSF---ETNYKEVSKIYDQM-QRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLD 299
+++ +E + +M QR PDV +Y LI Y K + E E M D
Sbjct: 269 AMIHVYGKAGRTREAELLVTKMKQRKDCCPDVATYNSLIEMYVKNDKLELVSGCLERMRD 328
Query: 300 AGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEG 359
+GV P + L+ A+A + +V +A + + M D YT M++ YV A D+
Sbjct: 329 SGVSPDQVTFRTLISAYAANNVVWKAEALVQEMEGSGFFIDQAMYTVMIAMYVRARDVSK 388
Query: 360 AEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMD 419
AE FR L G + V TY ++ YA+ L++ E+++ + G+K +++ +M
Sbjct: 389 AESVFRFLHSRGGL-EVSTYVGVMDVYAEHKCLDQAREVFELAKNAGLK-TPSLYNVMMK 446
Query: 420 AYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSL 455
AYG F AV ++ ME G P++ + N L+ L
Sbjct: 447 AYGACDRFTDAVTVFEAMEKDGASPNEASFNSLIQL 482
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 96/400 (24%), Positives = 186/400 (46%), Gaps = 13/400 (3%)
Query: 93 DFNEMDFLMLITAYGKQGDFNKAEKVLSFM-NKKGYAPSVVSHTALMEAYGRGGRYKNAE 151
+ + F +I YGK G +AE +++ M +K P V ++ +L+E Y + + +
Sbjct: 261 ELTTVTFNAMIHVYGKAGRTREAELLVTKMKQRKDCCPDVATYNSLIEMYVKNDKLELVS 320
Query: 152 AIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMI 211
RM+ SG P +T++ ++ + N +AE + + E S DQ M+ +MI
Sbjct: 321 GCLERMRDSGVSPDQVTFRTLISAYAANNVVWKAEALVQEM---EGSGFFIDQAMYTVMI 377
Query: 212 YMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYK---EVSKIYDQMQRAGLQ 268
MY +A KA +F + RG + + TY +M +K + ++++ + AGL+
Sbjct: 378 AMYVRARDVSKAESVFRFLHSRGGLEVS-TYVGVMDVYAEHKCLDQAREVFELAKNAGLK 436
Query: 269 PDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTV 328
+ Y +++ AYG R +A+ VFE M G P ++N L+ +++ + V
Sbjct: 437 TPSL-YNVMMKAYGACDRFTDAVTVFEAMEKDGASPNEASFNSLIQLLCKGRLLEILQRV 495
Query: 329 FKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAK 388
++ P + S ++++S Y + + AE+ F+ + G +VI Y L+ YA+
Sbjct: 496 LVLVKAAGFKPSLASCSSVVSFYGDMGRVREAERVFKEMLASGVEADVICYSALLNAYAE 555
Query: 389 VNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKA 448
+ + D ++ G P+ ++T++M Y A Y+E+ PD A
Sbjct: 556 AGFAREAQQTLDSLKAAGFVPDTIVYTSMMKLYSNLGLTAEAEKIYEEISR--LSPDVFA 613
Query: 449 KNILLSLAKTADERNEANELLGNFNHPNNEPGINGLSISV 488
N +L+L + EA +L +PG+N ++ ++
Sbjct: 614 ANTMLNLYIKSGMFTEAEQLFRAMQR--GKPGLNEVACTM 651
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 80/351 (22%), Positives = 169/351 (48%), Gaps = 10/351 (2%)
Query: 99 FLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQ 158
+ ++I Y + D +KAE V F++ +G V ++ +M+ Y A +F +
Sbjct: 373 YTVMIAMYVRARDVSKAESVFRFLHSRG-GLEVSTYVGVMDVYAEHKCLDQAREVFELAK 431
Query: 159 SSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAG 218
++G + +L Y +++K + ++F +A VF + EK P++ F+ +I + K
Sbjct: 432 NAGLKTPSL-YNVMMKAYGACDRFTDAVTVFEAM---EKDGASPNEASFNSLIQLLCKGR 487
Query: 219 GYEKARKLFALMAERGVQQSTVTYNSLMSFETN---YKEVSKIYDQMQRAGLQPDVVSYA 275
E +++ L+ G + S + +S++SF + +E +++ +M +G++ DV+ Y+
Sbjct: 488 LLEILQRVLVLVKAAGFKPSLASCSSVVSFYGDMGRVREAERVFKEMLASGVEADVICYS 547
Query: 276 LLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRD 335
L+NAY +A EA + + AG P Y ++ ++ G+ +A +++ +
Sbjct: 548 ALLNAYAEAGFAREAQQTLDSLKAAGFVPDTIVYTSMMKLYSNLGLTAEAEKIYEEI--S 605
Query: 336 RCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKM 395
R SPD+ + TML+ Y+ + AE+ FR +++ N + ++K Y + +E+
Sbjct: 606 RLSPDVFAANTMLNLYIKSGMFTEAEQLFRAMQRGKPGLNEVACTMMLKLYREAGKIEQG 665
Query: 396 MEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQ 446
+++ M + + F ++ Y K A+ KEM G P +
Sbjct: 666 LDVARVMSRRFLITDARAFNGVIAMYVKAGLMREALEALKEMRRAGLVPSR 716
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 103/226 (45%), Gaps = 14/226 (6%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
+++ YG G +AE+V M G V+ ++AL+ AY G + A+ ++++G
Sbjct: 514 VVSFYGDMGRVREAERVFKEMLASGVEADVICYSALLNAYAEAGFAREAQQTLDSLKAAG 573
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
P + Y ++KL+ EAE+++ EE S L PD + M+ +Y K+G +
Sbjct: 574 FVPDTIVYTSMMKLYSNLGLTAEAEKIY-----EEISRLSPDVFAANTMLNLYIKSGMFT 628
Query: 222 KARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSKIYDQ------MQRAGLQPDVVSYA 275
+A +LF M + V ++ Y+E KI M R L D ++
Sbjct: 629 EAEQLFRAMQRGKPGLNEVACTMMLKL---YREAGKIEQGLDVARVMSRRFLITDARAFN 685
Query: 276 LLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGM 321
+I Y KA EAL +EM AG+ P+ ++ + +GM
Sbjct: 686 GVIAMYVKAGLMREALEALKEMRRAGLVPSRSTFSCFEEILERAGM 731
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 60/248 (24%), Positives = 103/248 (41%), Gaps = 39/248 (15%)
Query: 228 ALMAERGVQQSTVTYNSLMSFETNYKEVSKIYDQMQRA-GLQPDVVSYALLINAYGKARR 286
+L+ +R + + + ++S + ++++ +++ QR + +V Y +L+ G+A +
Sbjct: 73 SLVLDRAGRLESRELSRILSEQRDWRKAIEVFSWFQRQDNYEANVFLYNILLRTLGRAAK 132
Query: 287 EEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTT 346
E + EML V PT Y+IL+D +GM D+A ++ M PD
Sbjct: 133 WELLQKYWSEMLGERVPPTIFTYSILVDVHGRAGMKDEAIRFYRHMIESGVEPD----EV 188
Query: 347 MLSAYVNA----SDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKM 402
M+S Y+N D+E AEK F L F N L+ G K
Sbjct: 189 MVSTYMNLQRRFGDLEEAEKAFWGL----FSEN------LVDGTTK-------------- 224
Query: 403 RVNGIKP-NQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADE 461
+P N F T++ YG++ F A + EM G N ++ + A
Sbjct: 225 -----RPENPETFNTMISFYGEHAKFAEASKVFAEMMKAGVELTTVTFNAMIHVYGKAGR 279
Query: 462 RNEANELL 469
EA L+
Sbjct: 280 TREAELLV 287
>gi|413933767|gb|AFW68318.1| hypothetical protein ZEAMMB73_786057 [Zea mays]
Length = 645
Score = 148 bits (374), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 92/403 (22%), Positives = 191/403 (47%), Gaps = 7/403 (1%)
Query: 70 LKQLKKWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAP 129
L ++W V +++E + + + N + F LI + G F + +V + M + G AP
Sbjct: 227 LCMARRWGHVQDLMEEM-VAAGCPPNIVTFSTLIGHLCRNGLFERVHEVHAQMAEHGCAP 285
Query: 130 SVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVF 189
V + +++ + R + A I RM S G P+ + Y +LK A++++EAE +
Sbjct: 286 DVRMYATIIDGVCKEERLEVARGILNRMPSYGLSPNVVCYNTLLKGLCSADRWEEAEGLL 345
Query: 190 MTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSF- 248
+ D++ PL D F++++ + G ++ ++ M E G +TY ++++
Sbjct: 346 AEMFDKD-CPL--DDVTFNILVDFLCQNGLVDRVIEVLEQMLEHGCMPDVITYTTVINGF 402
Query: 249 --ETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTH 306
E E + M G +P+ VSY +++ A R +A + +M+ G P
Sbjct: 403 CKEGLIDEAVMLLRSMAACGCRPNTVSYTIVLKGLCSAERWVDAEELMSQMIQQGCPPNP 462
Query: 307 KAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRR 366
+N L++ G+V+QA + K M + CSPD+ SY+T++ A + + A +
Sbjct: 463 VTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGNTDEALELLNV 522
Query: 367 LKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKD 426
+ + G PN I Y ++ + + K++++++ ++ ++ + ++ ++ + K +
Sbjct: 523 MVKKGMSPNTIIYSSIASALSGEGRINKVIQMFENIQDTTVRSDAVLYNAVISSLCKRGE 582
Query: 427 FDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELL 469
D A+ + M S G P++ IL+ + EA E+L
Sbjct: 583 TDRAIEFLAYMVSSGCVPNESTYTILIRGLASEGFVKEAQEIL 625
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 94/414 (22%), Positives = 166/414 (40%), Gaps = 42/414 (10%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + L+ A +G A VL M ++G AP+ + +EA R ++ A +
Sbjct: 110 NAYTYFPLVRALCARGRIADALAVLDDMARRGCAPTPPMYHVTLEAACRASGFRGAVGVL 169
Query: 155 RRMQ------------------------------------SSGPRPSALTYQIILKLFVE 178
R + S G P ++Y +L+
Sbjct: 170 RDLHGRGCALDVGNCNLVLQAVCDQGPVDEAVRLLRDLLPSFGCEPDVVSYNAVLRGLCM 229
Query: 179 ANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQS 238
A ++ +++ ++ + P+ F +I + G +E+ ++ A MAE G
Sbjct: 230 ARRWGHVQDLMEEMV---AAGCPPNIVTFSTLIGHLCRNGLFERVHEVHAQMAEHGCAPD 286
Query: 239 TVTYNSLM---SFETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFE 295
Y +++ E + I ++M GL P+VV Y L+ A R EEA +
Sbjct: 287 VRMYATIIDGVCKEERLEVARGILNRMPSYGLSPNVVCYNTLLKGLCSADRWEEAEGLLA 346
Query: 296 EMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNAS 355
EM D +NIL+D +G+VD+ V + M C PD+ +YTT+++ +
Sbjct: 347 EMFDKDCPLDDVTFNILVDFLCQNGLVDRVIEVLEQMLEHGCMPDVITYTTVINGFCKEG 406
Query: 356 DMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFT 415
++ A R + G PN ++Y ++KG E+ +M G PN F
Sbjct: 407 LIDEAVMLLRSMAACGCRPNTVSYTIVLKGLCSAERWVDAEELMSQMIQQGCPPNPVTFN 466
Query: 416 TIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELL 469
T+++ K + A+ K+M G PD + + ++ A +EA ELL
Sbjct: 467 TLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGNTDEALELL 520
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 72/316 (22%), Positives = 142/316 (44%), Gaps = 41/316 (12%)
Query: 94 FNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAI 153
+++ F +L+ + G ++ +VL M + G P V+++T ++ + + G A +
Sbjct: 355 LDDVTFNILVDFLCQNGLVDRVIEVLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVML 414
Query: 154 FRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYM 213
R M + G RP+ ++Y I+LK A ++ +AEE
Sbjct: 415 LRSMAACGCRPNTVSYTIVLKGLCSAERWVDAEE-------------------------- 448
Query: 214 YKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETN---YKEVSKIYDQMQRAGLQPD 270
L + M ++G + VT+N+L++F ++ ++ QM G PD
Sbjct: 449 ------------LMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPD 496
Query: 271 VVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFK 330
++SY+ +I+ GKA +EAL + M+ G+ P Y+ + A + G +++ +F+
Sbjct: 497 LISYSTVIDGLGKAGNTDEALELLNVMVKKGMSPNTIIYSSIASALSGEGRINKVIQMFE 556
Query: 331 CMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVN 390
++ D Y ++S+ + + A +F + G VPN TY LI+G A
Sbjct: 557 NIQDTTVRSDAVLYNAVISSLCKRGETDRAIEFLAYMVSSGCVPNESTYTILIRGLASEG 616
Query: 391 NLEKMMEIYDKMRVNG 406
+++ EI ++ G
Sbjct: 617 FVKEAQEILTELCSKG 632
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/264 (23%), Positives = 102/264 (38%), Gaps = 36/264 (13%)
Query: 242 YNSLMSFETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAG 301
YN++++ +++ + P+ +Y L+ A R +ALAV ++M G
Sbjct: 82 YNAMVAGYCRAGQLAAARRLAASVPVAPNAYTYFPLVRALCARGRIADALAVLDDMARRG 141
Query: 302 VRPTHKAY-----------------------------------NILLDAFAISGMVDQA- 325
PT Y N++L A G VD+A
Sbjct: 142 CAPTPPMYHVTLEAACRASGFRGAVGVLRDLHGRGCALDVGNCNLVLQAVCDQGPVDEAV 201
Query: 326 RTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKG 385
R + + C PD+ SY +L A + + G PN++T+ TLI
Sbjct: 202 RLLRDLLPSFGCEPDVVSYNAVLRGLCMARRWGHVQDLMEEMVAAGCPPNIVTFSTLIGH 261
Query: 386 YAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPD 445
+ E++ E++ +M +G P+ ++ TI+D K + + A M S G P+
Sbjct: 262 LCRNGLFERVHEVHAQMAEHGCAPDVRMYATIIDGVCKEERLEVARGILNRMPSYGLSPN 321
Query: 446 QKAKNILLSLAKTADERNEANELL 469
N LL +AD EA LL
Sbjct: 322 VVCYNTLLKGLCSADRWEEAEGLL 345
>gi|255661192|gb|ACU25765.1| pentatricopeptide repeat-containing protein [Lampayo castellani]
Length = 426
Score = 148 bits (374), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 93/378 (24%), Positives = 185/378 (48%), Gaps = 41/378 (10%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
LI K D++KA + S + + G+AP +V++ +++ +G+ ++ A ++ M+++G
Sbjct: 50 LIELSRKLCDYSKAISIFSRLKRSGFAPDLVAYNSMINVFGKAKLFREARSLINEMRTAG 109
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFM------TLLD--------------------- 194
P ++Y +L + VE +F EA VF LLD
Sbjct: 110 VMPDTVSYTTLLTMHVENKRFLEALSVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEAD 169
Query: 195 -----EEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSF- 248
K ++P+ ++ ++ +Y A + +A LF LM + ++Q+ VTYNS+M
Sbjct: 170 KLFWGMRKIGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIY 229
Query: 249 --ETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTH 306
+++ + + +MQ G++P+ ++Y+ +I+ +GK + + A +F+++ ++GV
Sbjct: 230 GKTLEHEKANNLIQEMQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRNSGVEIDQ 289
Query: 307 KAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRR 366
Y ++ A+ +G+V A+ + ++R PD T + A +E A FR+
Sbjct: 290 VLYQTMIVAYERAGLVAHAKRLLHELKR----PDNIPRDTAIHILAAAGRJEEATWVFRQ 345
Query: 367 LKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKD 426
G V ++ + LI ++K ++E++DKMR P+ + +++AYGK +
Sbjct: 346 AIDAGEVKDITVFERLIHLFSKYKKYXNVVEVFDKMRERRYFPDSNVIALVLNAYGKLHE 405
Query: 427 FDSAVVWYKEM--ESCGF 442
F+ A Y EM E C F
Sbjct: 406 FEKANSVYMEMQDEGCXF 423
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 85/325 (26%), Positives = 146/325 (44%), Gaps = 38/325 (11%)
Query: 200 LKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFE---TNYKEVS 256
L PD+ + +I + K G ++ A M + V V Y++L+ +Y +
Sbjct: 5 LSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDYSKAI 64
Query: 257 KIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAF 316
I+ +++R+G PD+V+Y +IN +GKA+ EA ++ EM AGV P +Y LL
Sbjct: 65 SIFSRLKRSGFAPDLVAYNSMINVFGKAKLFREARSLINEMRTAGVMPDTVSYTTLLTMH 124
Query: 317 AISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNV 376
+ +A +VF MR +C D+ + M+ Y + A+K F +++ G PNV
Sbjct: 125 VENKRFLEALSVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKIGIEPNV 184
Query: 377 ITYGTLIKGYA---------------KVNNLEK-------MMEIYDK------------- 401
++Y TL++ Y + N+E+ MM IY K
Sbjct: 185 VSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLIQE 244
Query: 402 MRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADE 461
M+ GI+PN ++TI+ +GK D A + ++++ + G DQ ++ + A
Sbjct: 245 MQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRNSGVEIDQVLYQTMIVAYERAGL 304
Query: 462 RNEANELLGNFNHPNNEPGINGLSI 486
A LL P+N P + I
Sbjct: 305 VAHAKRLLHELKRPDNIPRDTAIHI 329
>gi|22330179|ref|NP_683419.1| ABA Overly-Sensitive 5 protein [Arabidopsis thaliana]
gi|75216707|sp|Q9ZU27.1|PPR76_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g51965, mitochondrial; Flags: Precursor
gi|4220445|gb|AAD12672.1| Similar to gi|3004555 F19F24.14 salt inducible protein homolog from
Arabidopsis thaliana BAC gb|AC003673 [Arabidopsis
thaliana]
gi|332194619|gb|AEE32740.1| ABA Overly-Sensitive 5 protein [Arabidopsis thaliana]
Length = 650
Score = 148 bits (374), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 96/361 (26%), Positives = 171/361 (47%), Gaps = 9/361 (2%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
+E + ++I G+ G ++A + + M +G +VV + LM+ +G A +F
Sbjct: 269 DEYTYTIMIRTMGRIGKCDEAVGLFNEMITEGLTLNVVGYNTLMQVLAKGKMVDKAIQVF 328
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
RM +G RP+ TY ++L L V + + V E S Q ++ ++
Sbjct: 329 SRMVETGCRPNEYTYSLLLNLLVAEGQLVRLDGVV------EISKRYMTQGIYSYLVRTL 382
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSLM-SFETNYKEVSKI--YDQMQRAGLQPDV 271
K G +A +LF M V+ +Y S++ S K + I ++ G+ D
Sbjct: 383 SKLGHVSEAHRLFCDMWSFPVKGERDSYMSMLESLCGAGKTIEAIEMLSKIHEKGVVTDT 442
Query: 272 VSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKC 331
+ Y + +A GK ++ +FE+M G P YNIL+ +F G VD+A +F+
Sbjct: 443 MMYNTVFSALGKLKQISHIHDLFEKMKKDGPSPDIFTYNILIASFGRVGEVDEAINIFEE 502
Query: 332 MRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNN 391
+ R C PDI SY ++++ D++ A F+ +++ G P+V+TY TL++ + K
Sbjct: 503 LERSDCKPDIISYNSLINCLGKNGDVDEAHVRFKEMQEKGLNPDVVTYSTLMECFGKTER 562
Query: 392 LEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNI 451
+E ++++M V G +PN + ++D KN AV Y +M+ G PD +
Sbjct: 563 VEMAYSLFEEMLVKGCQPNIVTYNILLDCLEKNGRTAEAVDLYSKMKQQGLTPDSITYTV 622
Query: 452 L 452
L
Sbjct: 623 L 623
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 88/406 (21%), Positives = 179/406 (44%), Gaps = 8/406 (1%)
Query: 86 LRIQSWWDF--NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGR 143
LR+ WD N + L+ AY + D++KA V + + G+ + ++ L++A +
Sbjct: 191 LRLVKKWDLKMNSFTYKCLLQAYLRSRDYSKAFDVYCEIRRGGHKLDIFAYNMLLDALAK 250
Query: 144 GGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPD 203
+ A +F M+ R TY I+++ K EA +F ++ E L +
Sbjct: 251 D---EKACQVFEDMKKRHCRRDEYTYTIMIRTMGRIGKCDEAVGLFNEMITEG---LTLN 304
Query: 204 QKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSKIYDQMQ 263
++ ++ + K +KA ++F+ M E G + + TY+ L++ ++ ++ ++
Sbjct: 305 VVGYNTLMQVLAKGKMVDKAIQVFSRMVETGCRPNEYTYSLLLNLLVAEGQLVRLDGVVE 364
Query: 264 RAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVD 323
+ Y+ L+ K EA +F +M V+ +Y +L++ +G
Sbjct: 365 ISKRYMTQGIYSYLVRTLSKLGHVSEAHRLFCDMWSFPVKGERDSYMSMLESLCGAGKTI 424
Query: 324 QARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLI 383
+A + + D Y T+ SA + F ++K+DG P++ TY LI
Sbjct: 425 EAIEMLSKIHEKGVVTDTMMYNTVFSALGKLKQISHIHDLFEKMKKDGPSPDIFTYNILI 484
Query: 384 KGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFP 443
+ +V +++ + I++++ + KP+ + ++++ GKN D D A V +KEM+ G
Sbjct: 485 ASFGRVGEVDEAINIFEELERSDCKPDIISYNSLINCLGKNGDVDEAHVRFKEMQEKGLN 544
Query: 444 PDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGINGLSISVD 489
PD + L+ + A L +P I +I +D
Sbjct: 545 PDVVTYSTLMECFGKTERVEMAYSLFEEMLVKGCQPNIVTYNILLD 590
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 75/386 (19%), Positives = 154/386 (39%), Gaps = 38/386 (9%)
Query: 146 RYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQK 205
R+ +I M S + T I++ F E++ M L +K LK +
Sbjct: 151 RFDRVRSILDSMVKSNVHGNISTVNILIGFF------GNTEDLQMCLRLVKKWDLKMNSF 204
Query: 206 MFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSKIYDQMQRA 265
+ ++ Y ++ Y KA ++ + G + YN L+ ++ ++++ M++
Sbjct: 205 TYKCLLQAYLRSRDYSKAFDVYCEIRRGGHKLDIFAYNMLLDALAKDEKACQVFEDMKKR 264
Query: 266 GLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQA 325
+ D +Y ++I G+ + +EA+ +F EM+ G+ YN L+ A MVD+A
Sbjct: 265 HCRRDEYTYTIMIRTMGRIGKCDEAVGLFNEMITEGLTLNVVGYNTLMQVLAKGKMVDKA 324
Query: 326 RTVFKCMRRDRCSPDICSYTTMLSAYVNASDM---EGAEKFFRRLKQDGFVPNVI----- 377
VF M C P+ +Y+ +L+ V + +G + +R G ++
Sbjct: 325 IQVFSRMVETGCRPNEYTYSLLLNLLVAEGQLVRLDGVVEISKRYMTQGIYSYLVRTLSK 384
Query: 378 ------------------------TYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTI 413
+Y ++++ + +E+ K+ G+ + +
Sbjct: 385 LGHVSEAHRLFCDMWSFPVKGERDSYMSMLESLCGAGKTIEAIEMLSKIHEKGVVTDTMM 444
Query: 414 FTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFN 473
+ T+ A GK K +++M+ G PD NIL++ E +EA +
Sbjct: 445 YNTVFSALGKLKQISHIHDLFEKMKKDGPSPDIFTYNILIASFGRVGEVDEAINIFEELE 504
Query: 474 HPNNEPGINGLSISVDEEDDDDDDDE 499
+ +P I + ++ + D DE
Sbjct: 505 RSDCKPDIISYNSLINCLGKNGDVDE 530
Score = 40.8 bits (94), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 19/74 (25%), Positives = 38/74 (51%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
L+ +GK A + M KG P++V++ L++ + GR A ++ +M+ G
Sbjct: 553 LMECFGKTERVEMAYSLFEEMLVKGCQPNIVTYNILLDCLEKNGRTAEAVDLYSKMKQQG 612
Query: 162 PRPSALTYQIILKL 175
P ++TY ++ +L
Sbjct: 613 LTPDSITYTVLERL 626
>gi|115472343|ref|NP_001059770.1| Os07g0513200 [Oryza sativa Japonica Group]
gi|27818007|dbj|BAC55770.1| putative CRP1 protein [Oryza sativa Japonica Group]
gi|50509504|dbj|BAD31185.1| putative CRP1 protein [Oryza sativa Japonica Group]
gi|113611306|dbj|BAF21684.1| Os07g0513200 [Oryza sativa Japonica Group]
gi|215715304|dbj|BAG95055.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 754
Score = 148 bits (374), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 87/342 (25%), Positives = 168/342 (49%), Gaps = 6/342 (1%)
Query: 99 FLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQ 158
F +++ + ++GD A M K+G A V++TAL+ R G K AE + + M+
Sbjct: 358 FTTVMSGFCRKGDLAAARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEAERVLQEME 417
Query: 159 SSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAG 218
G A+TY +++ + + K EA V ++ + + P+ + + K G
Sbjct: 418 DKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKR---VTPNVVTYTALSDGLCKQG 474
Query: 219 GYEKARKLFALMAERGVQQSTVTYNSL---MSFETNYKEVSKIYDQMQRAGLQPDVVSYA 275
A +L M +G++ + TYNSL + N ++ + M AGL+PDV +Y
Sbjct: 475 DVCAANELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYT 534
Query: 276 LLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRD 335
+I A +++ + A ++ +EMLD G++PT YN+L++ F +SG V+ + + + M
Sbjct: 535 TIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEK 594
Query: 336 RCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKM 395
P+ +Y +++ Y +M+ + ++ + VPN TY LIKG+ K N+++
Sbjct: 595 NIHPNTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQEVVPNENTYNILIKGHCKARNMKEA 654
Query: 396 MEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEM 437
+ + +M G + + + ++ K K F A +++M
Sbjct: 655 LYFHSEMIEKGFRLTASSYNALIRLLNKKKKFTEARRLFEKM 696
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 91/331 (27%), Positives = 147/331 (44%), Gaps = 44/331 (13%)
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
P + +Y I+LK A + K+A ++F DE SP PD + +M++ Y E
Sbjct: 249 PEKNTCSYNILLKALCTAGRIKDAHQLF----DEMASP--PDVVTYGIMVHGYCTLSELE 302
Query: 222 KARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSKI----------------------- 258
A KL + MA RG++ + V Y S+++ + +VS
Sbjct: 303 TAIKLLSEMAARGLELNPVAYTSVIALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVM 362
Query: 259 ---------------YDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVR 303
+D+MQ+ GL D V+Y LIN +A +EA V +EM D G+
Sbjct: 363 SGFCRKGDLAAARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLD 422
Query: 304 PTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKF 363
Y +L+D + G + +A V M + R +P++ +YT + D+ A +
Sbjct: 423 VDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANEL 482
Query: 364 FRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGK 423
+ G N+ TY +LI G K NLE+ M M G+KP+ +TTI+ A +
Sbjct: 483 LHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQ 542
Query: 424 NKDFDSAVVWYKEMESCGFPPDQKAKNILLS 454
+K+ D A +EM G P N+L++
Sbjct: 543 SKELDRAHSLLQEMLDKGIKPTIVTYNVLMN 573
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 101/441 (22%), Positives = 187/441 (42%), Gaps = 8/441 (1%)
Query: 92 WDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAE 151
+ N + + +I +G + A +V+ M G T +M + R G A
Sbjct: 316 LELNPVAYTSVIALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGDLAAAR 375
Query: 152 AIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMI 211
F MQ G +TY ++ A + KEAE V + D+ L D + ++I
Sbjct: 376 NWFDEMQKRGLAADGVTYTALINGLCRAGELKEAERVLQEMEDKG---LDVDAVTYTVLI 432
Query: 212 YMYKKAGGYEKARKLFALMAERGVQQSTVTYNSL---MSFETNYKEVSKIYDQMQRAGLQ 268
Y K G +A + M ++ V + VTY +L + + + +++ +M GL+
Sbjct: 433 DGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLE 492
Query: 269 PDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTV 328
++ +Y LIN KA E+A+ +M +AG++P Y ++ A S +D+A ++
Sbjct: 493 LNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSL 552
Query: 329 FKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAK 388
+ M P I +Y +++ + + +EG ++ + + PN TY +L+K Y
Sbjct: 553 LQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYCI 612
Query: 389 VNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKA 448
N++ EIY M + PN+ + ++ + K ++ A+ ++ EM GF +
Sbjct: 613 EKNMKSTTEIYKGMLSQEVVPNENTYNILIKGHCKARNMKEALYFHSEMIEKGFRLTASS 672
Query: 449 KNILLSLAKTADERNEANELLGNFNHP--NNEPGINGLSISVDEEDDDDDDDEDDDDNIY 506
N L+ L + EA L EP + I + +D+ + D +
Sbjct: 673 YNALIRLLNKKKKFTEARRLFEKMRKERLTAEPDVYNFYIDLSFNEDNLESTLALCDELV 732
Query: 507 HDGDGDGDGDDNEDDAEETIA 527
D ++D AEE I
Sbjct: 733 EVTLVKSIADTDDDFAEEHIC 753
>gi|255551759|ref|XP_002516925.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223544013|gb|EEF45539.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 901
Score = 148 bits (374), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 124/481 (25%), Positives = 210/481 (43%), Gaps = 65/481 (13%)
Query: 58 LPKDL----VLGTLVRLKQLKKWNVVSEVLEWLR-IQSWWDFNEMDFLMLITAYGKQGDF 112
LP D+ ++G L + +L + + E +E R + + +N M I YG G F
Sbjct: 300 LPDDVTYTSMIGVLCKGNRLDEAVEIFEQMEQNRNVPCAYAYNTM-----IMGYGSAGKF 354
Query: 113 NKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNA---------------------- 150
++A +L +G PSV+++ ++ G+ GR A
Sbjct: 355 DEAYSLLERQKARGCIPSVIAYNCILTCLGKKGRLGEALRTFEEMKKDAAPNLSTYNVLI 414
Query: 151 ---------EAIFR---RMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKS 198
EA F+ M+ +G P+ +T I++ +A K EA +F +
Sbjct: 415 DMLCKAGEVEAAFKVRDAMKEAGLFPNVMTVNIMIDRLCKAKKLDEACSIFEGM---NHK 471
Query: 199 PLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMS--FETNYKE-V 255
PD+ F +I K G + A +L+ M + + V Y SL+ F+ KE
Sbjct: 472 ICSPDEVTFCSLIDGLGKQGRVDDAYRLYEQMLDSDKIPNAVVYTSLIKSFFKCGRKEDG 531
Query: 256 SKIYDQMQRAGLQPDVVSYALLINAYG----KARREEEALAVFEEMLDAGVRPTHKAYNI 311
KI+ +M G PD+ L+NAY KA + A+FEE+ G P +Y+I
Sbjct: 532 HKIFKEMIHRGCSPDL----RLLNAYMDCVFKAGETGKGRALFEEIKSRGFIPDVMSYSI 587
Query: 312 LLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDG 371
L+ +G + +F M+ C D +Y T + + + + A + +K G
Sbjct: 588 LIHGLVKAGFARETYELFYAMKEQGCVLDTHAYNTFIDGFCKSGKVNKAYQLLEEMKTKG 647
Query: 372 FVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAV 431
P V+TYG++I G AK++ L++ ++++ + NG++ N I+++++D +GK D A
Sbjct: 648 RQPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSNGLELNVVIYSSLIDGFGKVGRIDEAY 707
Query: 432 VWYKEMESCGFPPDQKAKNILLSLAKTADERNEA-------NELLGNFNHPNNEPGINGL 484
+ +E+ G P+ N LL A+E NEA L G NH INGL
Sbjct: 708 LIMEELMQKGLTPNVYTWNCLLDALVKAEEINEALVCFQNMKNLKGTPNHITYSILINGL 767
Query: 485 S 485
Sbjct: 768 C 768
Score = 146 bits (368), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 113/444 (25%), Positives = 203/444 (45%), Gaps = 14/444 (3%)
Query: 17 EVFKDAADEAGKKNWRRLMNQIEEVGSAVAV--LRSERTRGQPLPKDLVLGTLV-RLKQL 73
E+ KDAA N L++ + + G A +R P + + ++ RL +
Sbjct: 398 EMKKDAAPNLSTYN--VLIDMLCKAGEVEAAFKVRDAMKEAGLFPNVMTVNIMIDRLCKA 455
Query: 74 KKWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVS 133
KK + + E + +E+ F LI GKQG + A ++ M P+ V
Sbjct: 456 KKLDEACSIFEGMN-HKICSPDEVTFCSLIDGLGKQGRVDDAYRLYEQMLDSDKIPNAVV 514
Query: 134 HTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLL 193
+T+L++++ + GR ++ IF+ M G P + +A + + +F
Sbjct: 515 YTSLIKSFFKCGRKEDGHKIFKEMIHRGCSPDLRLLNAYMDCVFKAGETGKGRALF---- 570
Query: 194 DEEKS-PLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNY 252
+E KS PD + ++I+ KAG + +LF M E+G T YN+ +
Sbjct: 571 EEIKSRGFIPDVMSYSILIHGLVKAGFARETYELFYAMKEQGCVLDTHAYNTFIDGFCKS 630
Query: 253 KEVSKIY---DQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAY 309
+V+K Y ++M+ G QP VV+Y +I+ K R +EA +FEE G+ Y
Sbjct: 631 GKVNKAYQLLEEMKTKGRQPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSNGLELNVVIY 690
Query: 310 NILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQ 369
+ L+D F G +D+A + + + + +P++ ++ +L A V A ++ A F+ +K
Sbjct: 691 SSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEINEALVCFQNMKN 750
Query: 370 DGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDS 429
PN ITY LI G +V K + +M+ G+KPN +TT++ K +
Sbjct: 751 LKGTPNHITYSILINGLCRVRKFNKAFVFWQEMQKQGLKPNTITYTTMIAGLAKAGNIAE 810
Query: 430 AVVWYKEMESCGFPPDQKAKNILL 453
A ++ ++ G PD + N ++
Sbjct: 811 ASSLFERFKANGGVPDSASYNAII 834
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 85/329 (25%), Positives = 164/329 (49%), Gaps = 6/329 (1%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + + LI ++ K G K+ M +G +P + A M+ + G A+F
Sbjct: 511 NAVVYTSLIKSFFKCGRKEDGHKIFKEMIHRGCSPDLRLLNAYMDCVFKAGETGKGRALF 570
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
++S G P ++Y I++ V+A +E E+F + E+ L D ++ I +
Sbjct: 571 EEIKSRGFIPDVMSYSILIHGLVKAGFARETYELFYAM-KEQGCVL--DTHAYNTFIDGF 627
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSL---MSFETNYKEVSKIYDQMQRAGLQPDV 271
K+G KA +L M +G Q + VTY S+ ++ E ++++ + GL+ +V
Sbjct: 628 CKSGKVNKAYQLLEEMKTKGRQPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSNGLELNV 687
Query: 272 VSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKC 331
V Y+ LI+ +GK R +EA + EE++ G+ P +N LLDA + +++A F+
Sbjct: 688 VIYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEINEALVCFQN 747
Query: 332 MRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNN 391
M+ + +P+ +Y+ +++ A F++ +++ G PN ITY T+I G AK N
Sbjct: 748 MKNLKGTPNHITYSILINGLCRVRKFNKAFVFWQEMQKQGLKPNTITYTTMIAGLAKAGN 807
Query: 392 LEKMMEIYDKMRVNGIKPNQTIFTTIMDA 420
+ + ++++ + NG P+ + I++
Sbjct: 808 IAEASSLFERFKANGGVPDSASYNAIIEG 836
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 89/374 (23%), Positives = 174/374 (46%), Gaps = 7/374 (1%)
Query: 99 FLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQ 158
F +I + ++G + A +L M +V + ++ +G+ G+ A F ++
Sbjct: 236 FTTVIRVFAREGRLDAALSLLDEMKSNCLHADIVLYNVCIDCFGKAGKVDMAWKFFHEIK 295
Query: 159 SSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAG 218
S G P +TY ++ + + N+ EA E+F + E++ P ++ MI Y AG
Sbjct: 296 SHGLLPDDVTYTSMIGVLCKGNRLDEAVEIFEQM---EQNRNVPCAYAYNTMIMGYGSAG 352
Query: 219 GYEKARKLFALMAERGVQQSTVTYNSLMSF---ETNYKEVSKIYDQMQRAGLQPDVVSYA 275
+++A L RG S + YN +++ + E + +++M++ P++ +Y
Sbjct: 353 KFDEAYSLLERQKARGCIPSVIAYNCILTCLGKKGRLGEALRTFEEMKKDA-APNLSTYN 411
Query: 276 LLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRD 335
+LI+ KA E A V + M +AG+ P NI++D + +D+A ++F+ M
Sbjct: 412 VLIDMLCKAGEVEAAFKVRDAMKEAGLFPNVMTVNIMIDRLCKAKKLDEACSIFEGMNHK 471
Query: 336 RCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKM 395
CSPD ++ +++ ++ A + + ++ +PN + Y +LIK + K E
Sbjct: 472 ICSPDEVTFCSLIDGLGKQGRVDDAYRLYEQMLDSDKIPNAVVYTSLIKSFFKCGRKEDG 531
Query: 396 MEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSL 455
+I+ +M G P+ + MD K + ++E++S GF PD + +IL+
Sbjct: 532 HKIFKEMIHRGCSPDLRLLNAYMDCVFKAGETGKGRALFEEIKSRGFIPDVMSYSILIHG 591
Query: 456 AKTADERNEANELL 469
A E EL
Sbjct: 592 LVKAGFARETYELF 605
Score = 135 bits (340), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 96/397 (24%), Positives = 172/397 (43%), Gaps = 14/397 (3%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
+++ + +I K ++A ++ M + P ++ ++ YG G++ A ++
Sbjct: 302 DDVTYTSMIGVLCKGNRLDEAVEIFEQMEQNRNVPCAYAYNTMIMGYGSAGKFDEAYSLL 361
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
R ++ G PS + Y IL + + EA F +E K P+ ++++I M
Sbjct: 362 ERQKARGCIPSVIAYNCILTCLGKKGRLGEALRTF----EEMKKDAAPNLSTYNVLIDML 417
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYK---EVSKIYDQMQRAGLQPDV 271
KAG E A K+ M E G+ + +T N ++ K E I++ M PD
Sbjct: 418 CKAGEVEAAFKVRDAMKEAGLFPNVMTVNIMIDRLCKAKKLDEACSIFEGMNHKICSPDE 477
Query: 272 VSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKC 331
V++ LI+ GK R ++A ++E+MLD+ P Y L+ +F G + +FK
Sbjct: 478 VTFCSLIDGLGKQGRVDDAYRLYEQMLDSDKIPNAVVYTSLIKSFFKCGRKEDGHKIFKE 537
Query: 332 MRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNN 391
M CSPD+ + A + F +K GF+P+V++Y LI G K
Sbjct: 538 MIHRGCSPDLRLLNAYMDCVFKAGETGKGRALFEEIKSRGFIPDVMSYSILIHGLVKAGF 597
Query: 392 LEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNI 451
+ E++ M+ G + + T +D + K+ + A +EM++ G P
Sbjct: 598 ARETYELFYAMKEQGCVLDTHAYNTFIDGFCKSGKVNKAYQLLEEMKTKGRQPTVVTYGS 657
Query: 452 LLSLAKTADERNEANELLGNFNHPNNEPGINGLSISV 488
++ D +EA L E NGL ++V
Sbjct: 658 VIDGLAKIDRLDEAYMLF-------EEAKSNGLELNV 687
Score = 125 bits (313), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 89/403 (22%), Positives = 181/403 (44%), Gaps = 13/403 (3%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N M ++I K ++A + MN K +P V+ +L++ G+ GR +A ++
Sbjct: 441 NVMTVNIMIDRLCKAKKLDEACSIFEGMNHKICSPDEVTFCSLIDGLGKQGRVDDAYRLY 500
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
+M S P+A+ Y ++K F + + ++ ++F ++ SP D ++ + +
Sbjct: 501 EQMLDSDKIPNAVVYTSLIKSFFKCGRKEDGHKIFKEMIHRGCSP---DLRLLNAYMDCV 557
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSLMS--FETNY-KEVSKIYDQMQRAGLQPDV 271
KAG K R LF + RG ++Y+ L+ + + +E +++ M+ G D
Sbjct: 558 FKAGETGKGRALFEEIKSRGFIPDVMSYSILIHGLVKAGFARETYELFYAMKEQGCVLDT 617
Query: 272 VSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKC 331
+Y I+ + K+ + +A + EEM G +PT Y ++D A +D+A +F+
Sbjct: 618 HAYNTFIDGFCKSGKVNKAYQLLEEMKTKGRQPTVVTYGSVIDGLAKIDRLDEAYMLFEE 677
Query: 332 MRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNN 391
+ + ++ Y++++ + ++ A L Q G PNV T+ L+ K
Sbjct: 678 AKSNGLELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEE 737
Query: 392 LEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNI 451
+ + + + M+ PN ++ +++ + + F+ A V+++EM+ G P+
Sbjct: 738 INEALVCFQNMKNLKGTPNHITYSILINGLCRVRKFNKAFVFWQEMQKQGLKPNTITYTT 797
Query: 452 LLSLAKTADERNEANELLGNFNHPNNEPG-------INGLSIS 487
+++ A EA+ L F P I GLS S
Sbjct: 798 MIAGLAKAGNIAEASSLFERFKANGGVPDSASYNAIIEGLSYS 840
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 112/474 (23%), Positives = 199/474 (41%), Gaps = 54/474 (11%)
Query: 59 PK-DLVLGTLVRLKQLKKWNVVSEVLEWLRIQSWWDFNEMDFLMLITAY-------GKQG 110
PK DLV+G L R K V++ + + R W + D + AY K
Sbjct: 93 PKTDLVIGVLRRAKD------VNQAISYFR----WTERKTDQALCPEAYDSLLLVMAKNV 142
Query: 111 DFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQ 170
F+ E++L M+ G+ PS + L+ + + + + + + M+ RP+ Y
Sbjct: 143 KFDYFEQILGEMSIAGFGPSTKTCIELILSCIKSNKLREGFDLIQCMRKFKFRPAFSAYT 202
Query: 171 -------------IILKLF---------VEANKFKEAEEVF---------MTLLDEEKS- 198
I+L LF V + F VF ++LLDE KS
Sbjct: 203 TLIGALSSVQESDIMLTLFHQMQELGYEVSVHLFTTVIRVFAREGRLDAALSLLDEMKSN 262
Query: 199 PLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETN---YKEV 255
L D ++++ I + KAG + A K F + G+ VTY S++ E
Sbjct: 263 CLHADIVLYNVCIDCFGKAGKVDMAWKFFHEIKSHGLLPDDVTYTSMIGVLCKGNRLDEA 322
Query: 256 SKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDA 315
+I++QM++ P +Y +I YG A + +EA ++ E G P+ AYN +L
Sbjct: 323 VEIFEQMEQNRNVPCAYAYNTMIMGYGSAGKFDEAYSLLERQKARGCIPSVIAYNCILTC 382
Query: 316 FAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPN 375
G + +A F+ M++D +P++ +Y ++ A ++E A K +K+ G PN
Sbjct: 383 LGKKGRLGEALRTFEEMKKDA-APNLSTYNVLIDMLCKAGEVEAAFKVRDAMKEAGLFPN 441
Query: 376 VITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYK 435
V+T +I K L++ I++ M P++ F +++D GK D A Y+
Sbjct: 442 VMTVNIMIDRLCKAKKLDEACSIFEGMNHKICSPDEVTFCSLIDGLGKQGRVDDAYRLYE 501
Query: 436 EMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGINGLSISVD 489
+M P+ L+ + + +++ H P + L+ +D
Sbjct: 502 QMLDSDKIPNAVVYTSLIKSFFKCGRKEDGHKIFKEMIHRGCSPDLRLLNAYMD 555
Score = 85.5 bits (210), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 71/307 (23%), Positives = 134/307 (43%), Gaps = 14/307 (4%)
Query: 173 LKLFVEANK-------FKEAEEVFMTLLDEEKSPLKPDQKM----FHMMIYMYKKAGGYE 221
L LFVE+ K + A++V + + K DQ + + ++ + K ++
Sbjct: 86 LSLFVESPKTDLVIGVLRRAKDVNQAISYFRWTERKTDQALCPEAYDSLLLVMAKNVKFD 145
Query: 222 KARKLFALMAERGVQQSTVTYNSLM--SFETN-YKEVSKIYDQMQRAGLQPDVVSYALLI 278
++ M+ G ST T L+ ++N +E + M++ +P +Y LI
Sbjct: 146 YFEQILGEMSIAGFGPSTKTCIELILSCIKSNKLREGFDLIQCMRKFKFRPAFSAYTTLI 205
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCS 338
A + + L +F +M + G + + ++ FA G +D A ++ M+ +
Sbjct: 206 GALSSVQESDIMLTLFHQMQELGYEVSVHLFTTVIRVFAREGRLDAALSLLDEMKSNCLH 265
Query: 339 PDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEI 398
DI Y + + A ++ A KFF +K G +P+ +TY ++I K N L++ +EI
Sbjct: 266 ADIVLYNVCIDCFGKAGKVDMAWKFFHEIKSHGLLPDDVTYTSMIGVLCKGNRLDEAVEI 325
Query: 399 YDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKT 458
+++M N P + T++ YG FD A + ++ G P A N +L+
Sbjct: 326 FEQMEQNRNVPCAYAYNTMIMGYGSAGKFDEAYSLLERQKARGCIPSVIAYNCILTCLGK 385
Query: 459 ADERNEA 465
EA
Sbjct: 386 KGRLGEA 392
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 63/270 (23%), Positives = 113/270 (41%), Gaps = 41/270 (15%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSH--------------------------- 134
I + K G NKA ++L M KG P+VV++
Sbjct: 623 FIDGFCKSGKVNKAYQLLEEMKTKGRQPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSNG 682
Query: 135 --------TALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAE 186
++L++ +G+ GR A I + G P+ T+ +L V+A + EA
Sbjct: 683 LELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEINEAL 742
Query: 187 EVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSL- 245
F + + + +P + + ++I + + KA + M ++G++ +T+TY ++
Sbjct: 743 VCFQNMKNLKGTP---NHITYSILINGLCRVRKFNKAFVFWQEMQKQGLKPNTITYTTMI 799
Query: 246 --MSFETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVR 303
++ N E S ++++ + G PD SY +I +RR EA +FEE G
Sbjct: 800 AGLAKAGNIAEASSLFERFKANGGVPDSASYNAIIEGLSYSRRAMEAYKIFEETRMKGCN 859
Query: 304 PTHKAYNILLDAFAISGMVDQARTVFKCMR 333
K LLDA ++QA V +R
Sbjct: 860 IHTKTCIALLDALQKDECLEQAAIVGAVLR 889
>gi|358344944|ref|XP_003636545.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355502480|gb|AES83683.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1280
Score = 148 bits (374), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 94/381 (24%), Positives = 177/381 (46%), Gaps = 6/381 (1%)
Query: 92 WDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAE 151
+ N + + +LI K G A +VL + K +VV ++ +++ + +A
Sbjct: 154 FHLNHVTYGILINGLCKMGQTRAALQVLRQIEGKLVNTNVVMYSTIIDGLCKDKLVTDAY 213
Query: 152 AIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMI 211
++ M P+ +T+ ++ F KFK+A +F ++ + + PD F++++
Sbjct: 214 GLYSEMIVKRIPPTVVTFSSLIYGFCIVGKFKDAFRLFNEMVMKN---INPDAYTFNILV 270
Query: 212 YMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSK---IYDQMQRAGLQ 268
K G ++A+ + A+M + GV+ + VTYN+LM EV K + + R +
Sbjct: 271 DALCKEGKIKEAKNVIAVMMKEGVEPTVVTYNTLMDGYCLVNEVGKAKHVLSIISRMRVA 330
Query: 269 PDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTV 328
P+ SY ++IN + K + +EAL +F EM G+ P YN L+D +G + A +
Sbjct: 331 PNSRSYNIMINGFCKIKMVDEALCLFHEMCCRGIAPHKVTYNSLIDGLCKAGRIPYAWEL 390
Query: 329 FKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAK 388
M + DI +Y +++ + ++ A +++K+ G PN+ TY LI G K
Sbjct: 391 VDEMHNNCIPADIVTYNSLIDVFCKNQHVDKAIALVKKIKEHGIQPNMCTYNILIDGLCK 450
Query: 389 VNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKA 448
L+ +++ + + G N + +++ K FD A V +ME G PD
Sbjct: 451 GGQLKNAQDVFQDLLIKGYNVNAWTYNIMINGLCKEGLFDEAEVLLSKMEDNGIIPDAVT 510
Query: 449 KNILLSLAKTADERNEANELL 469
++ DE +A +LL
Sbjct: 511 YETIIQALFHKDENEKAQKLL 531
Score = 118 bits (296), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 87/379 (22%), Positives = 168/379 (44%), Gaps = 31/379 (8%)
Query: 113 NKAEKVLSF---MNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQ----------- 158
N VLS M KG P + + + L+ Y G+ A ++F ++
Sbjct: 81 NHYPTVLSLSTQMESKGVKPDLFTLSILINCYCHLGQMTFAFSVFAKILKMGLCLNGKVN 140
Query: 159 ----------SSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFH 208
+ G + +TY I++ + + + A +V + E + + M+
Sbjct: 141 EALLFHDHVLALGFHLNHVTYGILINGLCKMGQTRAALQVLRQI---EGKLVNTNVVMYS 197
Query: 209 MMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLM---SFETNYKEVSKIYDQMQRA 265
+I K A L++ M + + + VT++SL+ +K+ +++++M
Sbjct: 198 TIIDGLCKDKLVTDAYGLYSEMIVKRIPPTVVTFSSLIYGFCIVGKFKDAFRLFNEMVMK 257
Query: 266 GLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQA 325
+ PD ++ +L++A K + +EA V M+ GV PT YN L+D + + V +A
Sbjct: 258 NINPDAYTFNILVDALCKEGKIKEAKNVIAVMMKEGVEPTVVTYNTLMDGYCLVNEVGKA 317
Query: 326 RTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKG 385
+ V + R R +P+ SY M++ + ++ A F + G P+ +TY +LI G
Sbjct: 318 KHVLSIISRMRVAPNSRSYNIMINGFCKIKMVDEALCLFHEMCCRGIAPHKVTYNSLIDG 377
Query: 386 YAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPD 445
K + E+ D+M N I + + +++D + KN+ D A+ K+++ G P+
Sbjct: 378 LCKAGRIPYAWELVDEMHNNCIPADIVTYNSLIDVFCKNQHVDKAIALVKKIKEHGIQPN 437
Query: 446 QKAKNILL-SLAKTADERN 463
NIL+ L K +N
Sbjct: 438 MCTYNILIDGLCKGGQLKN 456
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 73/314 (23%), Positives = 152/314 (48%), Gaps = 6/314 (1%)
Query: 97 MDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRR 156
+ F LI + G F A ++ + M K P + L++A + G+ K A+ +
Sbjct: 229 VTFSSLIYGFCIVGKFKDAFRLFNEMVMKNINPDAYTFNILVDALCKEGKIKEAKNVIAV 288
Query: 157 MQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKK 216
M G P+ +TY ++ + N+ +A+ V + + + P+ + +++MI + K
Sbjct: 289 MMKEGVEPTVVTYNTLMDGYCLVNEVGKAKHVLSII---SRMRVAPNSRSYNIMINGFCK 345
Query: 217 AGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVS---KIYDQMQRAGLQPDVVS 273
++A LF M RG+ VTYNSL+ + ++ D+M + D+V+
Sbjct: 346 IKMVDEALCLFHEMCCRGIAPHKVTYNSLIDGLCKAGRIPYAWELVDEMHNNCIPADIVT 405
Query: 274 YALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMR 333
Y LI+ + K + ++A+A+ +++ + G++P YNIL+D G + A+ VF+ +
Sbjct: 406 YNSLIDVFCKNQHVDKAIALVKKIKEHGIQPNMCTYNILIDGLCKGGQLKNAQDVFQDLL 465
Query: 334 RDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLE 393
+ + +Y M++ + AE +++ +G +P+ +TY T+I+ + E
Sbjct: 466 IKGYNVNAWTYNIMINGLCKEGLFDEAEVLLSKMEDNGIIPDAVTYETIIQALFHKDENE 525
Query: 394 KMMEIYDKMRVNGI 407
K ++ +M + G+
Sbjct: 526 KAQKLLREMVIKGV 539
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 78/296 (26%), Positives = 141/296 (47%), Gaps = 22/296 (7%)
Query: 94 FNEM----------DFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAY-- 141
FNEM F +L+ A K+G +A+ V++ M K+G P+VV++ LM+ Y
Sbjct: 251 FNEMVMKNINPDAYTFNILVDALCKEGKIKEAKNVIAVMMKEGVEPTVVTYNTLMDGYCL 310
Query: 142 -GRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPL 200
G+ K+ +I RM+ + P++ +Y I++ F + EA +F + +
Sbjct: 311 VNEVGKAKHVLSIISRMRVA---PNSRSYNIMINGFCKIKMVDEALCLFHEMCCRG---I 364
Query: 201 KPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSK--- 257
P + ++ +I KAG A +L M + VTYNSL+ + V K
Sbjct: 365 APHKVTYNSLIDGLCKAGRIPYAWELVDEMHNNCIPADIVTYNSLIDVFCKNQHVDKAIA 424
Query: 258 IYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFA 317
+ +++ G+QP++ +Y +LI+ K + + A VF+++L G YNI+++
Sbjct: 425 LVKKIKEHGIQPNMCTYNILIDGLCKGGQLKNAQDVFQDLLIKGYNVNAWTYNIMINGLC 484
Query: 318 ISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFV 373
G+ D+A + M + PD +Y T++ A + + E A+K R + G V
Sbjct: 485 KEGLFDEAEVLLSKMEDNGIIPDAVTYETIIQALFHKDENEKAQKLLREMVIKGVV 540
Score = 101 bits (252), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 82/396 (20%), Positives = 169/396 (42%), Gaps = 24/396 (6%)
Query: 118 VLSF--MNKKGYAPSVVSHTALMEAYGRG-GRYKNAEAIFRRMQSSGPRPSALTYQIILK 174
VLSF M + PS+V ++ + Y ++ +M+S G +P T I++
Sbjct: 51 VLSFNRMRQIRQTPSIVEFNKILTYLIKTKNHYPTVLSLSTQMESKGVKPDLFTLSILIN 110
Query: 175 LFVEANKFKEAEEVFMTLLDE--------EKSPLKPDQKM---FHM-------MIYMYKK 216
+ + A VF +L ++ L D + FH+ +I K
Sbjct: 111 CYCHLGQMTFAFSVFAKILKMGLCLNGKVNEALLFHDHVLALGFHLNHVTYGILINGLCK 170
Query: 217 AGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVS---KIYDQMQRAGLQPDVVS 273
G A ++ + + V + V Y++++ K V+ +Y +M + P VV+
Sbjct: 171 MGQTRAALQVLRQIEGKLVNTNVVMYSTIIDGLCKDKLVTDAYGLYSEMIVKRIPPTVVT 230
Query: 274 YALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMR 333
++ LI + + ++A +F EM+ + P +NIL+DA G + +A+ V M
Sbjct: 231 FSSLIYGFCIVGKFKDAFRLFNEMVMKNINPDAYTFNILVDALCKEGKIKEAKNVIAVMM 290
Query: 334 RDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLE 393
++ P + +Y T++ Y +++ A+ + + PN +Y +I G+ K+ ++
Sbjct: 291 KEGVEPTVVTYNTLMDGYCLVNEVGKAKHVLSIISRMRVAPNSRSYNIMINGFCKIKMVD 350
Query: 394 KMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILL 453
+ + ++ +M GI P++ + +++D K A EM + P D N L+
Sbjct: 351 EALCLFHEMCCRGIAPHKVTYNSLIDGLCKAGRIPYAWELVDEMHNNCIPADIVTYNSLI 410
Query: 454 SLAKTADERNEANELLGNFNHPNNEPGINGLSISVD 489
+ ++A L+ +P + +I +D
Sbjct: 411 DVFCKNQHVDKAIALVKKIKEHGIQPNMCTYNILID 446
>gi|218191892|gb|EEC74319.1| hypothetical protein OsI_09597 [Oryza sativa Indica Group]
Length = 1167
Score = 148 bits (374), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 93/374 (24%), Positives = 180/374 (48%), Gaps = 10/374 (2%)
Query: 101 MLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSS 160
++I + + + A ++LS M G +P+V +++ ++ + G + A + M +
Sbjct: 297 LIIEGHFRHHNKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTK 356
Query: 161 GPRPSALTYQIILKLFVEANKFKEAEEVF--MTLLDEEKSPLKPDQKMFHMMIYMYKKAG 218
G +P+A Y ++ + A E+F MT K + PD ++ +I+ K G
Sbjct: 357 GLKPNAFVYAPLISGYCREGNVSLACEIFDKMT-----KVNVLPDLYCYNSLIFGLSKVG 411
Query: 219 GYEKARKLFALMAERGVQQSTVTYNSLMSF---ETNYKEVSKIYDQMQRAGLQPDVVSYA 275
E++ K FA M ERG+ + TY+ L+ + + ++ +M GL+P+ V Y
Sbjct: 412 RVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYI 471
Query: 276 LLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRD 335
L+ +Y K+ E+ + F+ MLD GV ++ Y IL+ + SG ++ A V + ++
Sbjct: 472 DLLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSEIEKN 531
Query: 336 RCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKM 395
PD+ Y++++S +D E A + + G PN++ Y LI G K ++
Sbjct: 532 GSVPDVHVYSSLISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYA 591
Query: 396 MEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSL 455
+++ + G+ PN +T+++D K D +A Y EM + G PD ++L +
Sbjct: 592 RNVFNSILAKGLVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLATGITPDAFVYSVLTTG 651
Query: 456 AKTADERNEANELL 469
+A + +A L+
Sbjct: 652 CSSAGDLEQAMFLI 665
Score = 145 bits (365), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 106/436 (24%), Positives = 194/436 (44%), Gaps = 50/436 (11%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
LI AY K +F+ A+KVL M ++G + V++ L+ R G + A + M+ G
Sbjct: 123 LIEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGAVEEAFGFKKDMEDYG 182
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDE-EKSPLKPDQKMFHMMIYMYKKAGGY 220
P TY ++ ++ + EA+ LLDE + LKP+ ++ +I + + G
Sbjct: 183 LVPDGFTYGALINGLCKSRRSNEAK----ALLDEMSCAELKPNVVVYANLIDGFMREGNA 238
Query: 221 EKARKLFALMAERGVQQSTVTYNSLMSF-------------------------------- 248
++A K+ M GVQ + +TY++L+
Sbjct: 239 DEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYNLI 298
Query: 249 ------ETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGV 302
N K+ ++ +M+ AG+ P+V +Y+++I+ ++ E+A + EEM G+
Sbjct: 299 IEGHFRHHNKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGL 358
Query: 303 RPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEK 362
+P Y L+ + G V A +F M + PD+ Y +++ +E + K
Sbjct: 359 KPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTK 418
Query: 363 FFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYG 422
+F ++++ G +PN TY LI GY K +LE ++ +M G+KPN I+ ++++Y
Sbjct: 419 YFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYF 478
Query: 423 KNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPG-- 480
K+ D + +K M G D + IL+ ++ A +L + P
Sbjct: 479 KSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSEIEKNGSVPDVH 538
Query: 481 -----INGLSISVDEE 491
I+GL + D E
Sbjct: 539 VYSSLISGLCKTADRE 554
Score = 132 bits (331), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 87/356 (24%), Positives = 164/356 (46%), Gaps = 6/356 (1%)
Query: 101 MLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSS 160
+L+ Y K G A +V+ M +G APS+ AL++ R + M +
Sbjct: 52 VLVDTYKKSGRVQDAAEVVLMMRDRGLAPSIRCCNALLKDLLRADAMALLWKVREFMVGA 111
Query: 161 GPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGY 220
G P TY +++ + + +F A++V L++ + + ++++I ++G
Sbjct: 112 GISPDVYTYSTLIEAYCKVREFDTAKKV---LVEMRERGCGLNTVTYNVLIAGLCRSGAV 168
Query: 221 EKARKLFALMAERGVQQSTVTYNSLMSFETNYK---EVSKIYDQMQRAGLQPDVVSYALL 277
E+A M + G+ TY +L++ + E + D+M A L+P+VV YA L
Sbjct: 169 EEAFGFKKDMEDYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANL 228
Query: 278 INAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRC 337
I+ + + +EA + +EM+ AGV+P Y+ L+ G +D+A + K M RD
Sbjct: 229 IDGFMREGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSH 288
Query: 338 SPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMME 397
PD +Y ++ + + + A + ++ G PNV TY +I G + EK +
Sbjct: 289 RPDTITYNLIIEGHFRHHNKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASD 348
Query: 398 IYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILL 453
+ ++M G+KPN ++ ++ Y + + A + +M PD N L+
Sbjct: 349 LLEEMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLI 404
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 87/387 (22%), Positives = 169/387 (43%), Gaps = 7/387 (1%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + LI+ Y ++G+ + A ++ M K P + + +L+ + GR + + F
Sbjct: 361 NAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYF 420
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
+MQ G P+ TY ++ +++ + AE++ +LD + LKP+ ++ ++ Y
Sbjct: 421 AQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLD---TGLKPNDVIYIDLLESY 477
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSL---MSFETNYKEVSKIYDQMQRAGLQPDV 271
K+ EK F M ++GV Y L +S N + ++ ++++ G PDV
Sbjct: 478 FKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSEIEKNGSVPDV 537
Query: 272 VSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKC 331
Y+ LI+ K E+A + +EM GV P YN L+D SG + AR VF
Sbjct: 538 HVYSSLISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNS 597
Query: 332 MRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNN 391
+ P+ +YT+++ D+ A + + G P+ Y L G + +
Sbjct: 598 ILAKGLVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLATGITPDAFVYSVLTTGCSSAGD 657
Query: 392 LEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNI 451
LE+ M + ++M + G + + F ++D + K + + G P+
Sbjct: 658 LEQAMFLIEEMFLRG-HASISSFNNLVDGFCKRGKMQETLKLLHVIMGRGLVPNALTIEN 716
Query: 452 LLSLAKTADERNEANELLGNFNHPNNE 478
++S A + +E + + +E
Sbjct: 717 IISGLSEAGKLSEVHTIFVELQQKTSE 743
Score = 122 bits (306), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 90/384 (23%), Positives = 180/384 (46%), Gaps = 8/384 (2%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
LI K N+A+ +L M+ P+VV + L++ + R G A + + M ++G
Sbjct: 193 LINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANLIDGFMREGNADEAFKMIKEMVAAG 252
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
+P+ +TY +++ + + A + ++ + +PD ++++I + + +
Sbjct: 253 VQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSH---RPDTITYNLIIEGHFRHHNKK 309
Query: 222 KARKLFALMAERGVQQSTVTYNSLMSFETNYKE---VSKIYDQMQRAGLQPDVVSYALLI 278
A +L + M G+ + TY+ ++ E S + ++M GL+P+ YA LI
Sbjct: 310 DAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLI 369
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCS 338
+ Y + A +F++M V P YN L+ + G V+++ F M+
Sbjct: 370 SGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLL 429
Query: 339 PDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEI 398
P+ +Y+ ++ Y+ D+E AE+ +R+ G PN + Y L++ Y K +++EK+
Sbjct: 430 PNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSST 489
Query: 399 YDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLS-LAK 457
+ M G+ + I+ ++ + + ++A E+E G PD + L+S L K
Sbjct: 490 FKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSEIEKNGSVPDVHVYSSLISGLCK 549
Query: 458 TADERNEANELLGNFNHPNNEPGI 481
TAD R +A +L + +P I
Sbjct: 550 TAD-REKAFGILDEMSKKGVDPNI 572
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 69/283 (24%), Positives = 125/283 (44%), Gaps = 3/283 (1%)
Query: 209 MMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVS---KIYDQMQRA 265
+++ YKK+G + A ++ +M +RG+ S N+L+ ++ K+ + M A
Sbjct: 52 VLVDTYKKSGRVQDAAEVVLMMRDRGLAPSIRCCNALLKDLLRADAMALLWKVREFMVGA 111
Query: 266 GLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQA 325
G+ PDV +Y+ LI AY K R + A V EM + G YN+L+ SG V++A
Sbjct: 112 GISPDVYTYSTLIEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGAVEEA 171
Query: 326 RTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKG 385
K M PD +Y +++ + A+ + PNV+ Y LI G
Sbjct: 172 FGFKKDMEDYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANLIDG 231
Query: 386 YAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPD 445
+ + N ++ ++ +M G++PN+ + ++ K D A + K+M PD
Sbjct: 232 FMREGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPD 291
Query: 446 QKAKNILLSLAKTADERNEANELLGNFNHPNNEPGINGLSISV 488
N+++ + +A LL + P + SI +
Sbjct: 292 TITYNLIIEGHFRHHNKKDAFRLLSEMENAGISPNVYTYSIMI 334
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 86/403 (21%), Positives = 153/403 (37%), Gaps = 60/403 (14%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
NE + LI Y K GD AE+++ M G P+ V + L+E+Y + + + F
Sbjct: 431 NEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTF 490
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
+ M G Y I++ + + A F L + EK+ PD ++ +I
Sbjct: 491 KSMLDQGVMLDNRIYGILIHNLSSSGNMEAA---FRVLSEIEKNGSVPDVHVYSSLISGL 547
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVS---KIYDQMQRAGLQPDV 271
K EKA + M+++GV + V YN+L+ ++S +++ + GL P+
Sbjct: 548 CKTADREKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSILAKGLVPNC 607
Query: 272 VSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKC 331
V+Y LI+ K A ++ EML G+ P Y++L + +G ++QA + +
Sbjct: 608 VTYTSLIDGSCKVGDISNAFYLYNEMLATGITPDAFVYSVLTTGCSSAGDLEQAMFLIEE 667
Query: 332 MRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKG------ 385
M R I S+ ++ + M+ K + G VPN +T +I G
Sbjct: 668 MFL-RGHASISSFNNLVDGFCKRGKMQETLKLLHVIMGRGLVPNALTIENIISGLSEAGK 726
Query: 386 -----------------------------------------------YAKVNNLEKMMEI 398
+ K NL+K + +
Sbjct: 727 LSEVHTIFVELQQKTSESAARHFSSLFMDMINQGKIPLDVVDDMIRDHCKEGNLDKALML 786
Query: 399 YDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCG 441
D + + + I+D + A+ KEM+ G
Sbjct: 787 RDVIVAKSAPMGCSSYLAIVDNLCRKGKLSEALNLLKEMDKRG 829
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 80/190 (42%), Gaps = 1/190 (0%)
Query: 292 AVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAY 351
++ + D+G R + ++L+D + SG V A V MR +P I +L
Sbjct: 34 SIHRALSDSGHR-SPAVLDVLVDTYKKSGRVQDAAEVVLMMRDRGLAPSIRCCNALLKDL 92
Query: 352 VNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQ 411
+ A M K + G P+V TY TLI+ Y KV + ++ +MR G N
Sbjct: 93 LRADAMALLWKVREFMVGAGISPDVYTYSTLIEAYCKVREFDTAKKVLVEMRERGCGLNT 152
Query: 412 TIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGN 471
+ ++ ++ + A + K+ME G PD L++ + NEA LL
Sbjct: 153 VTYNVLIAGLCRSGAVEEAFGFKKDMEDYGLVPDGFTYGALINGLCKSRRSNEAKALLDE 212
Query: 472 FNHPNNEPGI 481
+ +P +
Sbjct: 213 MSCAELKPNV 222
>gi|356533316|ref|XP_003535211.1| PREDICTED: pentatricopeptide repeat-containing protein At5g04810,
chloroplastic-like [Glycine max]
Length = 918
Score = 148 bits (374), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 103/417 (24%), Positives = 193/417 (46%), Gaps = 40/417 (9%)
Query: 72 QLKKWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSV 131
Q + W V E ++ + ++ +++ Y ++GD + A + M +G PS
Sbjct: 255 QPENWQAVVTAFERIKKPA-----RKEYGLMVKYYARRGDMHHARQTFESMQARGIEPSS 309
Query: 132 VSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANK-------FKE 184
+++L+ AY G + A R+M+ G + +TY II+ F + K FKE
Sbjct: 310 HVYSSLIHAYAVGRDMEEALHCVRKMKEEGIEMTIVTYSIIVGGFAKMGKADAADHWFKE 369
Query: 185 AEEVFMTL-----------------LDEEKSPLKPDQ--------KMFHMMIYMYKKAGG 219
A+E +L +D ++ ++ + ++H M+ Y G
Sbjct: 370 AKEKLPSLNAVTYGSIIYAHCQTCNMDRAEALVREMEVQGIDAPIDIYHTMMDGYTMIGN 429
Query: 220 YEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSK---IYDQMQRAGLQPDVVSYAL 276
EK +F + E G S ++Y L++ T +VSK I M+ +G++ ++ +Y++
Sbjct: 430 EEKCLIVFDRLKECGFSPSVISYGCLINLYTKIGKVSKALQISKMMKMSGIKHNMKTYSM 489
Query: 277 LINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDR 336
LIN + K + A +VFE+ G++P YN ++ AF +D+A + K M+++R
Sbjct: 490 LINGFLKLKDWANAFSVFEDFTKDGLKPDVVLYNNIITAFCGMSNMDRAICMVKQMQKER 549
Query: 337 CSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMM 396
P ++ ++ + A +M A + F +++ G +P V TY LI G + + K +
Sbjct: 550 YRPTTRTFLPIIHGFARAGEMRRALEIFDMMRRSGCIPTVHTYNALILGLVEKRKMAKAV 609
Query: 397 EIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILL 453
I D+M V G+ PN+ +TT+M Y D + A ++ + + G D LL
Sbjct: 610 AILDQMNVAGVGPNEHTYTTLMQGYASLGDTEKAFQYFSVLRNEGLEIDVYTYEALL 666
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 102/387 (26%), Positives = 181/387 (46%), Gaps = 10/387 (2%)
Query: 59 PKDLVLGTLVRLKQLKKWNVVSEVLEWLRIQ--SWWDFNEMDFLMLITAYGKQGDFNKAE 116
P + G L+ L K VS+ L+ ++ S N + MLI + K D+ A
Sbjct: 447 PSVISYGCLINL--YTKIGKVSKALQISKMMKMSGIKHNMKTYSMLINGFLKLKDWANAF 504
Query: 117 KVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLF 176
V K G P VV + ++ A+ A + ++MQ RP+ T+ I+ F
Sbjct: 505 SVFEDFTKDGLKPDVVLYNNIITAFCGMSNMDRAICMVKQMQKERYRPTTRTFLPIIHGF 564
Query: 177 VEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQ 236
A + + A E+F + +S P ++ +I + KA + M GV
Sbjct: 565 ARAGEMRRALEIFDMM---RRSGCIPTVHTYNALILGLVEKRKMAKAVAILDQMNVAGVG 621
Query: 237 QSTVTYNSLMSFETNYKEVSKIYDQ---MQRAGLQPDVVSYALLINAYGKARREEEALAV 293
+ TY +LM + + K + ++ GL+ DV +Y L+ + K+ R + ALAV
Sbjct: 622 PNEHTYTTLMQGYASLGDTEKAFQYFSVLRNEGLEIDVYTYEALLKSCCKSGRMQSALAV 681
Query: 294 FEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVN 353
+EM + YNIL+D +A G V +A + + MR++ PDI +YT+ ++A
Sbjct: 682 TKEMSAKNIPRNTFVYNILIDGWARRGDVWEAADLMQQMRKEGVLPDIHTYTSFVNACCK 741
Query: 354 ASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTI 413
A DM+ A + + ++ G PN+ TY TLI G+A+ + EK + +++M++ +KP++
Sbjct: 742 AGDMQKATEIIQEMEAFGIKPNLKTYTTLINGWARASMPEKALSCFEEMKLAELKPDKAA 801
Query: 414 FTTIMDAYGKNKDFDSAVVWYKEMESC 440
+ +M + F + V+ + C
Sbjct: 802 YHCLMTSLLSRATFAQSYVYSGLLSVC 828
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 71/289 (24%), Positives = 121/289 (41%), Gaps = 67/289 (23%)
Query: 201 KPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSKIYD 260
KP +K + +M+ Y + G AR+ F +
Sbjct: 271 KPARKEYGLMVKYYARRGDMHHARQTF--------------------------------E 298
Query: 261 QMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISG 320
MQ G++P Y+ LI+AY R EEAL +M + G+ T Y+I++ FA G
Sbjct: 299 SMQARGIEPSSHVYSSLIHAYAVGRDMEEALHCVRKMKEEGIEMTIVTYSIIVGGFAKMG 358
Query: 321 MVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFR--------------- 365
D A FK + S + +Y +++ A+ +M+ AE R
Sbjct: 359 KADAADHWFKEAKEKLPSLNAVTYGSIIYAHCQTCNMDRAEALVREMEVQGIDAPIDIYH 418
Query: 366 --------------------RLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVN 405
RLK+ GF P+VI+YG LI Y K+ + K ++I M+++
Sbjct: 419 TMMDGYTMIGNEEKCLIVFDRLKECGFSPSVISYGCLINLYTKIGKVSKALQISKMMKMS 478
Query: 406 GIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLS 454
GIK N ++ +++ + K KD+ +A +++ G PD N +++
Sbjct: 479 GIKHNMKTYSMLINGFLKLKDWANAFSVFEDFTKDGLKPDVVLYNNIIT 527
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 44/205 (21%), Positives = 99/205 (48%), Gaps = 4/205 (1%)
Query: 251 NYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYN 310
N++ V ++++++ P Y L++ Y + A FE M G+ P+ Y+
Sbjct: 258 NWQAVVTAFERIKK----PARKEYGLMVKYYARRGDMHHARQTFESMQARGIEPSSHVYS 313
Query: 311 ILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQD 370
L+ A+A+ +++A + M+ + I +Y+ ++ + + A+ +F+ K+
Sbjct: 314 SLIHAYAVGRDMEEALHCVRKMKEEGIEMTIVTYSIIVGGFAKMGKADAADHWFKEAKEK 373
Query: 371 GFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSA 430
N +TYG++I + + N+++ + +M V GI I+ T+MD Y + +
Sbjct: 374 LPSLNAVTYGSIIYAHCQTCNMDRAEALVREMEVQGIDAPIDIYHTMMDGYTMIGNEEKC 433
Query: 431 VVWYKEMESCGFPPDQKAKNILLSL 455
++ + ++ CGF P + L++L
Sbjct: 434 LIVFDRLKECGFSPSVISYGCLINL 458
>gi|297734042|emb|CBI15289.3| unnamed protein product [Vitis vinifera]
Length = 793
Score = 148 bits (374), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 89/340 (26%), Positives = 165/340 (48%), Gaps = 6/340 (1%)
Query: 70 LKQLKKWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAP 129
LKQ++ V WL+ Q+ + + + ++ G+ F K+L+ M + G P
Sbjct: 362 LKQIQDHPVALGFFYWLKRQTGFKHDGHTYTTMVGILGRARQFGAINKLLAEMVRDGCQP 421
Query: 130 SVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVF 189
+VV++ L+ +YGR A ++F RMQ +G +P +TY ++ + +A A ++
Sbjct: 422 NVVTYNRLIHSYGRANYLNEAVSVFDRMQEAGCQPDRVTYCTLIDIHAKAGFLDVALHMY 481
Query: 190 MTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFE 249
+ +++ L PD + ++I KAG A KLF M ++G + VTYN +++ +
Sbjct: 482 QKM---QEAHLSPDTFTYSVIINCLGKAGHLTSAHKLFCEMVDQGCVPNLVTYNIMIALQ 538
Query: 250 T---NYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTH 306
NY ++Y MQ AG QPD V+Y++++ G EEA A+F EM P
Sbjct: 539 AKARNYPTALELYRDMQNAGFQPDKVTYSIVMEVLGHCGHLEEAEAIFTEMKRKNWVPDE 598
Query: 307 KAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRR 366
Y +L+D + G V+++ ++ M P++ + ++LSA++ + A +
Sbjct: 599 PVYGLLVDLWGKVGNVEKSWEWYQAMLNAGLCPNVPTCNSLLSAFLRVHRLSDAYNLLQS 658
Query: 367 LKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNG 406
+ + G P++ TY L+ + + M + M V G
Sbjct: 659 MLRLGLQPSLQTYTLLLSCCTEARSSFDMGFCGELMAVTG 698
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 74/278 (26%), Positives = 140/278 (50%), Gaps = 3/278 (1%)
Query: 195 EEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSF--ETNY 252
+ ++ K D + M+ + +A + KL A M G Q + VTYN L+ NY
Sbjct: 379 KRQTGFKHDGHTYTTMVGILGRARQFGAINKLLAEMVRDGCQPNVVTYNRLIHSYGRANY 438
Query: 253 -KEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNI 311
E ++D+MQ AG QPD V+Y LI+ + KA + AL ++++M +A + P Y++
Sbjct: 439 LNEAVSVFDRMQEAGCQPDRVTYCTLIDIHAKAGFLDVALHMYQKMQEAHLSPDTFTYSV 498
Query: 312 LLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDG 371
+++ +G + A +F M C P++ +Y M++ A + A + +R ++ G
Sbjct: 499 IINCLGKAGHLTSAHKLFCEMVDQGCVPNLVTYNIMIALQAKARNYPTALELYRDMQNAG 558
Query: 372 FVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAV 431
F P+ +TY +++ +LE+ I+ +M+ P++ ++ ++D +GK + + +
Sbjct: 559 FQPDKVTYSIVMEVLGHCGHLEEAEAIFTEMKRKNWVPDEPVYGLLVDLWGKVGNVEKSW 618
Query: 432 VWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELL 469
WY+ M + G P+ N LLS ++A LL
Sbjct: 619 EWYQAMLNAGLCPNVPTCNSLLSAFLRVHRLSDAYNLL 656
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 66/233 (28%), Positives = 121/233 (51%), Gaps = 3/233 (1%)
Query: 226 LFALMAERGVQQSTVTYNSLMSF---ETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYG 282
+ L + G + TY +++ + ++K+ +M R G QP+VV+Y LI++YG
Sbjct: 375 FYWLKRQTGFKHDGHTYTTMVGILGRARQFGAINKLLAEMVRDGCQPNVVTYNRLIHSYG 434
Query: 283 KARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDIC 342
+A EA++VF+ M +AG +P Y L+D A +G +D A +++ M+ SPD
Sbjct: 435 RANYLNEAVSVFDRMQEAGCQPDRVTYCTLIDIHAKAGFLDVALHMYQKMQEAHLSPDTF 494
Query: 343 SYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKM 402
+Y+ +++ A + A K F + G VPN++TY +I AK N +E+Y M
Sbjct: 495 TYSVIINCLGKAGHLTSAHKLFCEMVDQGCVPNLVTYNIMIALQAKARNYPTALELYRDM 554
Query: 403 RVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSL 455
+ G +P++ ++ +M+ G + A + EM+ + PD+ +L+ L
Sbjct: 555 QNAGFQPDKVTYSIVMEVLGHCGHLEEAEAIFTEMKRKNWVPDEPVYGLLVDL 607
Score = 125 bits (313), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 82/314 (26%), Positives = 148/314 (47%), Gaps = 9/314 (2%)
Query: 168 TYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLF 227
TY ++ + A +F ++ ++ + +P+ ++ +I+ Y +A +A +F
Sbjct: 390 TYTTMVGILGRARQFGAINKLLAEMV---RDGCQPNVVTYNRLIHSYGRANYLNEAVSVF 446
Query: 228 ALMAERGVQQSTVTYNSLMSF--ETNYKEVS-KIYDQMQRAGLQPDVVSYALLINAYGKA 284
M E G Q VTY +L+ + + +V+ +Y +MQ A L PD +Y+++IN GKA
Sbjct: 447 DRMQEAGCQPDRVTYCTLIDIHAKAGFLDVALHMYQKMQEAHLSPDTFTYSVIINCLGKA 506
Query: 285 RREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSY 344
A +F EM+D G P YNI++ A + A +++ M+ PD +Y
Sbjct: 507 GHLTSAHKLFCEMVDQGCVPNLVTYNIMIALQAKARNYPTALELYRDMQNAGFQPDKVTY 566
Query: 345 TTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRV 404
+ ++ + +E AE F +K+ +VP+ YG L+ + KV N+EK E Y M
Sbjct: 567 SIVMEVLGHCGHLEEAEAIFTEMKRKNWVPDEPVYGLLVDLWGKVGNVEKSWEWYQAMLN 626
Query: 405 NGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSL---AKTADE 461
G+ PN +++ A+ + A + M G P + +LLS A+++ +
Sbjct: 627 AGLCPNVPTCNSLLSAFLRVHRLSDAYNLLQSMLRLGLQPSLQTYTLLLSCCTEARSSFD 686
Query: 462 RNEANELLGNFNHP 475
EL+ HP
Sbjct: 687 MGFCGELMAVTGHP 700
>gi|326489757|dbj|BAK01859.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 746
Score = 148 bits (374), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 86/347 (24%), Positives = 170/347 (48%), Gaps = 6/347 (1%)
Query: 99 FLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQ 158
F +I+ + +GD A ++ M K+G A V+HTAL+ R G K A+ + + M
Sbjct: 360 FTTVISGFCSKGDLAAARRLFEEMQKRGLAADRVTHTALINGLCRAGELKEADRVLQEMV 419
Query: 159 SSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAG 218
G +TY +++ + + EA V ++ + P+ + + K G
Sbjct: 420 DKGLDVDVVTYTVLIDGYCKRGNMVEAFRVHNEMVGRR---VAPNVVTYTALSDGLCKQG 476
Query: 219 GYEKARKLFALMAERGVQQSTVTYNSLMSFET---NYKEVSKIYDQMQRAGLQPDVVSYA 275
A +L M +G++ + TYNSL++ N ++ +I +M+ AG + DV +Y
Sbjct: 477 DVRAANELLHEMCNKGLELNVYTYNSLINGLCKFGNLEQAMRIMTEMEAAGHRTDVYTYT 536
Query: 276 LLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRD 335
LI+ K+ + A + +EMLD G++P+ YN+L++ F +SG V+ + + + M
Sbjct: 537 TLIDTLCKSGEFDRAHNMLQEMLDKGIKPSIATYNVLMNGFCMSGRVEGGKKLLEWMLEK 596
Query: 336 RCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKM 395
P++ +Y +++ Y +M+ + ++ + PN TY LIKG+ K N+++
Sbjct: 597 NVRPNVVTYNSLMKQYCIDKNMKSTTEIYKGMHSQEVAPNENTYNILIKGHCKARNMKEA 656
Query: 396 MEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGF 442
+ + +M G++ + ++ ++ K K F A V++ +M + G
Sbjct: 657 LYFHQEMIEKGLRLTASSYSALIRLLNKKKKFSEARVFFDKMRNEGL 703
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 71/255 (27%), Positives = 126/255 (49%), Gaps = 8/255 (3%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + + L KQGD A ++L M KG +V ++ +L+ + G + A I
Sbjct: 461 NVVTYTALSDGLCKQGDVRAANELLHEMCNKGLELNVYTYNSLINGLCKFGNLEQAMRIM 520
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
M+++G R TY ++ ++ +F A + +LD+ +KP +++++ +
Sbjct: 521 TEMEAAGHRTDVYTYTTLIDTLCKSGEFDRAHNMLQEMLDKG---IKPSIATYNVLMNGF 577
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSLM---SFETNYKEVSKIYDQMQRAGLQPDV 271
+G E +KL M E+ V+ + VTYNSLM + N K ++IY M + P+
Sbjct: 578 CMSGRVEGGKKLLEWMLEKNVRPNVVTYNSLMKQYCIDKNMKSTTEIYKGMHSQEVAPNE 637
Query: 272 VSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKC 331
+Y +LI + KAR +EAL +EM++ G+R T +Y+ L+ +AR F
Sbjct: 638 NTYNILIKGHCKARNMKEALYFHQEMIEKGLRLTASSYSALIRLLNKKKKFSEARVFFDK 697
Query: 332 MRRDRCS--PDICSY 344
MR + + PD+ S+
Sbjct: 698 MRNEGLTAEPDVYSF 712
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 90/378 (23%), Positives = 158/378 (41%), Gaps = 52/378 (13%)
Query: 115 AEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILK 174
+ ++L + + G +PS S A++ A A+FR + P + ++ I+LK
Sbjct: 212 SAELLRRLRQYGLSPSPESCNAVLSRLP----LDEAIALFREL----PDKNVCSHNILLK 263
Query: 175 LFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERG 234
+ A + K+A + F DE SP PD + M++ Y G E A KL MA +G
Sbjct: 264 ALLSAGRLKDACQHF----DEMSSP--PDVVTYGTMVHGYCVRGELENAVKLLDEMAAKG 317
Query: 235 VQQSTVTYNSLMSFETNYKEVS---KIYDQMQRAGLQPDVVSYALLINAYGKARREEEAL 291
++ + Y S+++ N +VS ++ + M G+ D V + +I+ + A
Sbjct: 318 LESNATVYTSVIALLCNKGQVSDALRVLEDMTMHGVALDAVVFTTVISGFCSKGDLAAAR 377
Query: 292 AVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAY 351
+FEEM G+ + L++ +G + +A V + M D+ +YT ++ Y
Sbjct: 378 RLFEEMQKRGLAADRVTHTALINGLCRAGELKEADRVLQEMVDKGLDVDVVTYTVLIDGY 437
Query: 352 VNASDMEGAEKFFRRLKQDGFVPNVI---------------------------------- 377
+M A + + PNV+
Sbjct: 438 CKRGNMVEAFRVHNEMVGRRVAPNVVTYTALSDGLCKQGDVRAANELLHEMCNKGLELNV 497
Query: 378 -TYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKE 436
TY +LI G K NLE+ M I +M G + + +TT++D K+ +FD A +E
Sbjct: 498 YTYNSLINGLCKFGNLEQAMRIMTEMEAAGHRTDVYTYTTLIDTLCKSGEFDRAHNMLQE 557
Query: 437 MESCGFPPDQKAKNILLS 454
M G P N+L++
Sbjct: 558 MLDKGIKPSIATYNVLMN 575
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/250 (23%), Positives = 109/250 (43%), Gaps = 6/250 (2%)
Query: 221 EKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSKIYDQMQRAGLQPDVVSYALLINA 280
++A LF + ++ V + +L+S K+ + +D+M PDVV+Y +++
Sbjct: 241 DEAIALFRELPDKNVCSHNILLKALLS-AGRLKDACQHFDEMSSP---PDVVTYGTMVHG 296
Query: 281 YGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPD 340
Y E A+ + +EM G+ Y ++ G V A V + M + D
Sbjct: 297 YCVRGELENAVKLLDEMAAKGLESNATVYTSVIALLCNKGQVSDALRVLEDMTMHGVALD 356
Query: 341 ICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYD 400
+TT++S + + D+ A + F +++ G + +T+ LI G + L++ +
Sbjct: 357 AVVFTTVISGFCSKGDLAAARRLFEEMQKRGLAADRVTHTALINGLCRAGELKEADRVLQ 416
Query: 401 KMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILL-SLAKTA 459
+M G+ + +T ++D Y K + A + EM P+ L L K
Sbjct: 417 EMVDKGLDVDVVTYTVLIDGYCKRGNMVEAFRVHNEMVGRRVAPNVVTYTALSDGLCKQG 476
Query: 460 DERNEANELL 469
D R ANELL
Sbjct: 477 DVR-AANELL 485
>gi|255661170|gb|ACU25754.1| pentatricopeptide repeat-containing protein [Junellia spathulata]
Length = 426
Score = 148 bits (374), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 96/374 (25%), Positives = 182/374 (48%), Gaps = 37/374 (9%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
LI K D++KA + S + + G+ P +V++ A++ +G+ ++ A ++ M+++G
Sbjct: 50 LIELSRKLCDYSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMRTAG 109
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
P+ +Y +L ++VE KF EA VF + E K L D ++MI +Y + G +
Sbjct: 110 VTPNTASYSTLLTMYVENKKFLEALSVFAEM-REIKCLL--DLTTCNIMIDVYGQLGMAK 166
Query: 222 KARKLFALMAERGVQQSTVTYNSLMSFETN---YKEVSKIYDQMQRAGLQPDVVSYALLI 278
+A KLF M + G++ + V+YN+L+ + + E ++ MQR ++ +VV+Y ++
Sbjct: 167 EADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMM 226
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCS 338
YGK E+A + +EM + G+ P Y+ ++ + G +D+A +F+ +R
Sbjct: 227 MIYGKTLEHEKANNLIQEMQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVD 286
Query: 339 PDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVP------------------------ 374
D Y TM+ AY A + A++ LK+ +P
Sbjct: 287 IDQVLYQTMIVAYERAGLVAHAKRLLHELKRPDNIPRDIAIHILAGAGRIEEATWVFRQA 346
Query: 375 -------NVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDF 427
++ + +I ++K ++ ++DKMR G P+ + +++AYGK +F
Sbjct: 347 IDAGEVKDITVFERMIHLFSKYKKYGNVVVVFDKMRGLGYFPDSNVIALVLNAYGKLHEF 406
Query: 428 DSAVVWYKEMESCG 441
D A Y EM+ G
Sbjct: 407 DKANDVYMEMQEVG 420
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 85/318 (26%), Positives = 146/318 (45%), Gaps = 38/318 (11%)
Query: 200 LKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFE---TNYKEVS 256
L PD+ + +I + K G ++ A M + V V Y++L+ +Y +
Sbjct: 5 LSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDYSKAI 64
Query: 257 KIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAF 316
I+ +++R+G PD+V+Y +IN +GKA+ EA ++ EM AGV P +Y+ LL +
Sbjct: 65 SIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVTPNTASYSTLLTMY 124
Query: 317 AISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNV 376
+ +A +VF MR +C D+ + M+ Y + A+K F +++ G PNV
Sbjct: 125 VENKKFLEALSVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNV 184
Query: 377 ITYGTLIKGYA---------------KVNNLEK-------MMEIYDK------------- 401
++Y TL++ Y + N+E+ MM IY K
Sbjct: 185 VSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLIQE 244
Query: 402 MRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADE 461
M+ GI+PN ++TI+ +GK D A + ++++ S G DQ ++ + A
Sbjct: 245 MQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVDIDQVLYQTMIVAYERAGL 304
Query: 462 RNEANELLGNFNHPNNEP 479
A LL P+N P
Sbjct: 305 VAHAKRLLHELKRPDNIP 322
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 45/181 (24%), Positives = 79/181 (43%)
Query: 301 GVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGA 360
+ P Y+ L+ F G+ D A + + M +DR D+ Y+ ++ D A
Sbjct: 4 ALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDYSKA 63
Query: 361 EKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDA 420
F RLK+ GF P+++ Y +I + K + + +MR G+ PN ++T++
Sbjct: 64 ISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVTPNTASYSTLLTM 123
Query: 421 YGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPG 480
Y +NK F A+ + EM D NI++ + EA++L EP
Sbjct: 124 YVENKKFLEALSVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPN 183
Query: 481 I 481
+
Sbjct: 184 V 184
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/244 (22%), Positives = 114/244 (46%), Gaps = 6/244 (2%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + + L+ YG F +A + M +K +VV++ ++M YG+ ++ A +
Sbjct: 183 NVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLI 242
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
+ MQ+ G P+++TY I+ ++ + K A +F L S + DQ ++ MI Y
Sbjct: 243 QEMQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKL---RSSGVDIDQVLYQTMIVAY 299
Query: 215 KKAGGYEKARKLFA-LMAERGVQQSTVTYNSLMSFETNYKEVSKIYDQMQRAGLQPDVVS 273
++AG A++L L + + + +++ +E + ++ Q AG D+
Sbjct: 300 ERAGLVAHAKRLLHELKRPDNIPRDIAIH--ILAGAGRIEEATWVFRQAIDAGEVKDITV 357
Query: 274 YALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMR 333
+ +I+ + K ++ + VF++M G P ++L+A+ D+A V+ M+
Sbjct: 358 FERMIHLFSKYKKYGNVVVVFDKMRGLGYFPDSNVIALVLNAYGKLHEFDKANDVYMEMQ 417
Query: 334 RDRC 337
C
Sbjct: 418 EVGC 421
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 65/276 (23%), Positives = 123/276 (44%), Gaps = 10/276 (3%)
Query: 101 MLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSS 160
++I YG+ G +A+K+ M K G P+VVS+ L+ YG + A +FR MQ
Sbjct: 154 IMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRK 213
Query: 161 GPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGY 220
+ +TY ++ ++ K E E+ + + + ++P+ + +I ++ K G
Sbjct: 214 NIEQNVVTYNSMMMIY---GKTLEHEKANNLIQEMQNRGIEPNSITYSTIISIWGKVGKL 270
Query: 221 EKARKLFALMAERGVQQSTVTYNSLM-SFETN--YKEVSKIYDQMQRAGLQPDVVSYALL 277
++A LF + GV V Y +++ ++E ++ +++R PD + +
Sbjct: 271 DRAAMLFQKLRSSGVDIDQVLYQTMIVAYERAGLVAHAKRLLHELKR----PDNIPRDIA 326
Query: 278 INAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRC 337
I+ A R EEA VF + +DAG + ++ F+ VF MR
Sbjct: 327 IHILAGAGRIEEATWVFRQAIDAGEVKDITVFERMIHLFSKYKKYGNVVVVFDKMRGLGY 386
Query: 338 SPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFV 373
PD +L+AY + + A + +++ G V
Sbjct: 387 FPDSNVIALVLNAYGKLHEFDKANDVYMEMQEVGCV 422
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/123 (22%), Positives = 64/123 (52%)
Query: 333 RRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNL 392
R SPD +Y+T+++ + + A + ++++QD +++ Y LI+ K+ +
Sbjct: 1 RERALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDY 60
Query: 393 EKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNIL 452
K + I+ +++ +G P+ + +++ +GK K F A EM + G P+ + + L
Sbjct: 61 SKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVTPNTASYSTL 120
Query: 453 LSL 455
L++
Sbjct: 121 LTM 123
>gi|359490053|ref|XP_003634022.1| PREDICTED: pentatricopeptide repeat-containing protein At4g30825,
chloroplastic-like [Vitis vinifera]
gi|297745081|emb|CBI38673.3| unnamed protein product [Vitis vinifera]
Length = 900
Score = 148 bits (374), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 100/405 (24%), Positives = 199/405 (49%), Gaps = 45/405 (11%)
Query: 78 VVSEVLEWLRIQSWWD--FNEMDFLMLITAYGKQGDFNKAEKVLSFM-NKKGYAPSVVSH 134
+V + ++ L+ + W D F + + ++I + + G A K+ S M NKK P++
Sbjct: 501 LVDDAIKVLQEKQWKDTIFEDNLYHLVICSCKELGRLENAVKIYSQMPNKK---PNLHIM 557
Query: 135 TALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLD 194
+++ Y GR+ +AE ++ +++SS + + I+++++V++ K+A V T+ D
Sbjct: 558 CTMIDIYSTLGRFSDAENLYLKLKSSEISLDMIAFSIVVRMYVKSGSLKDACSVLETM-D 616
Query: 195 EEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETN--- 251
E+K+ + PD +F M+ +Y++ G +K + L+ + + GV + YN +++
Sbjct: 617 EQKN-IVPDIYLFCDMLRIYQQCGMLDKLQDLYYRILKTGVTWDSEMYNCVINCCARALP 675
Query: 252 YKEVSKIYDQMQRAGLQP----------------------------------DVVSYALL 277
E+S+++D+M G P DV+SY +
Sbjct: 676 VDELSRLFDEMLLHGFAPNTITLNVMLDVYGKSRLFKKARKVLWLARKRGLVDVISYNTI 735
Query: 278 INAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRC 337
I AYG+++ ++ L+ +M G + + YN +LD++ G ++ R+V + M+ C
Sbjct: 736 IAAYGQSKDLKKMLSTVRQMQFNGFSVSLEVYNCMLDSYGKEGQIESFRSVLRRMKESSC 795
Query: 338 SPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMME 397
+ D +Y M++ Y +E LK+ G P++ +Y TLIK Y +E +
Sbjct: 796 ASDHYTYNIMINIYGEQGWIEEVANVLTELKESGLGPDLCSYNTLIKAYGIAGMVEDAVV 855
Query: 398 IYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGF 442
+ +MR NGI+P++ + +++A KN +F AV W M+ G
Sbjct: 856 LVKEMRENGIQPDRITYINLINALRKNDEFLEAVKWSLWMKQMGL 900
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 82/398 (20%), Positives = 173/398 (43%), Gaps = 43/398 (10%)
Query: 94 FNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAI 153
N ++L+L+ AY +QG +AE+VL M G++P++V++ L+ YG+ A+ I
Sbjct: 310 LNLENWLVLLNAYSQQGKLQEAERVLFSMQNAGFSPNIVAYNMLITGYGKASNMDAAQHI 369
Query: 154 FRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYM 213
FR +++ G P TY+ +++ + A +KEAE + L ++ KP+ + MI +
Sbjct: 370 FRNLKNVGLEPDESTYRSMIEGWGRAENYKEAEWYYNEL---KRLGFKPNSSNLYTMINL 426
Query: 214 YKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFE---------------------TNY 252
K E A + M G Q S+V L ++E N
Sbjct: 427 QAKYADGEDAARTLDDMKRIGCQYSSVLGTLLQAYERAGRIDRVPLILKGSFYEYVLVNQ 486
Query: 253 KEVSKIYDQMQRAGLQPDVVS----------------YALLINAYGKARREEEALAVFEE 296
S + + L D + Y L+I + + R E A+ ++ +
Sbjct: 487 TSCSILVMAYVKHCLVDDAIKVLQEKQWKDTIFEDNLYHLVICSCKELGRLENAVKIYSQ 546
Query: 297 MLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASD 356
M + +P ++D ++ G A ++ ++ S D+ +++ ++ YV +
Sbjct: 547 MPNK--KPNLHIMCTMIDIYSTLGRFSDAENLYLKLKSSEISLDMIAFSIVVRMYVKSGS 604
Query: 357 MEGAEKFFRRL-KQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFT 415
++ A + +Q VP++ + +++ Y + L+K+ ++Y ++ G+ + ++
Sbjct: 605 LKDACSVLETMDEQKNIVPDIYLFCDMLRIYQQCGMLDKLQDLYYRILKTGVTWDSEMYN 664
Query: 416 TIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILL 453
+++ + D + EM GF P+ N++L
Sbjct: 665 CVINCCARALPVDELSRLFDEMLLHGFAPNTITLNVML 702
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 59/278 (21%), Positives = 144/278 (51%), Gaps = 6/278 (2%)
Query: 196 EKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALM-AERGVQQSTVTYNSLM--SFETNY 252
E L+ + +++ + + + G ++ A + M + Q + YN+L+ ++ +
Sbjct: 164 ENGKLEGNVSAYNLALRVLGRRGDWDAAETMIWEMNGDSDCQVNFQVYNTLIYACYKQGH 223
Query: 253 KEV-SKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNI 311
E+ +K + M G++P+V ++ ++++ Y K ++ F +M G+ AY+
Sbjct: 224 VELGTKWFRLMLENGVRPNVATFGMVMSLYQKGWNVADSEYAFSQMRSFGI-TCQSAYSA 282
Query: 312 LLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDG 371
++ + + D+A V ++ D+ ++ ++ +L+AY ++ AE+ ++ G
Sbjct: 283 MITIYTRMSLYDKAEEVIDFIQEDKVILNLENWLVLLNAYSQQGKLQEAERVLFSMQNAG 342
Query: 372 FVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAV 431
F PN++ Y LI GY K +N++ I+ ++ G++P+++ + ++++ +G+ +++ A
Sbjct: 343 FSPNIVAYNMLITGYGKASNMDAAQHIFRNLKNVGLEPDESTYRSMIEGWGRAENYKEAE 402
Query: 432 VWYKEMESCGFPPDQKAKNILLSL-AKTADERNEANEL 468
+Y E++ GF P+ +++L AK AD + A L
Sbjct: 403 WYYNELKRLGFKPNSSNLYTMINLQAKYADGEDAARTL 440
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 79/326 (24%), Positives = 155/326 (47%), Gaps = 10/326 (3%)
Query: 122 MNKKGYAP--SVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALT-YQIILKLFVE 178
+N+ G P SV A+++ R K + F M+ +G ++ Y + L++
Sbjct: 126 VNEYGIGPELSVERCNAILKGLERCSDSKTMK-FFEWMRENGKLEGNVSAYNLALRVLGR 184
Query: 179 ANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQS 238
+ AE + + S + + ++++ +IY K G E K F LM E GV+ +
Sbjct: 185 RGDWDAAETMIWEM--NGDSDCQVNFQVYNTLIYACYKQGHVELGTKWFRLMLENGVRPN 242
Query: 239 TVTYNSLMSFET---NYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFE 295
T+ +MS N + + QM+ G+ +Y+ +I Y + ++A V +
Sbjct: 243 VATFGMVMSLYQKGWNVADSEYAFSQMRSFGITCQS-AYSAMITIYTRMSLYDKAEEVID 301
Query: 296 EMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNAS 355
+ + V + + +LL+A++ G + +A V M+ SP+I +Y +++ Y AS
Sbjct: 302 FIQEDKVILNLENWLVLLNAYSQQGKLQEAERVLFSMQNAGFSPNIVAYNMLITGYGKAS 361
Query: 356 DMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFT 415
+M+ A+ FR LK G P+ TY ++I+G+ + N ++ Y++++ G KPN +
Sbjct: 362 NMDAAQHIFRNLKNVGLEPDESTYRSMIEGWGRAENYKEAEWYYNELKRLGFKPNSSNLY 421
Query: 416 TIMDAYGKNKDFDSAVVWYKEMESCG 441
T+++ K D + A +M+ G
Sbjct: 422 TMINLQAKYADGEDAARTLDDMKRIG 447
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 80/355 (22%), Positives = 164/355 (46%), Gaps = 13/355 (3%)
Query: 83 LEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVS---HTALME 139
EW+R + N + + + G++GD++ AE ++ MN G + V+ + L+
Sbjct: 159 FEWMRENGKLEGNVSAYNLALRVLGRRGDWDAAETMIWEMN--GDSDCQVNFQVYNTLIY 216
Query: 140 AYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSP 199
A + G + FR M +G RP+ T+ +++ L+ + ++E F + +S
Sbjct: 217 ACYKQGHVELGTKWFRLMLENGVRPNVATFGMVMSLYQKGWNVADSEYAF----SQMRSF 272
Query: 200 LKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLM---SFETNYKEVS 256
Q + MI +Y + Y+KA ++ + E V + + L+ S + +E
Sbjct: 273 GITCQSAYSAMITIYTRMSLYDKAEEVIDFIQEDKVILNLENWLVLLNAYSQQGKLQEAE 332
Query: 257 KIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAF 316
++ MQ AG P++V+Y +LI YGKA + A +F + + G+ P Y +++ +
Sbjct: 333 RVLFSMQNAGFSPNIVAYNMLITGYGKASNMDAAQHIFRNLKNVGLEPDESTYRSMIEGW 392
Query: 317 AISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNV 376
+ +A + ++R P+ + TM++ +D E A + +K+ G +
Sbjct: 393 GRAENYKEAEWYYNELKRLGFKPNSSNLYTMINLQAKYADGEDAARTLDDMKRIGCQYSS 452
Query: 377 ITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAV 431
+ GTL++ Y + ++++ I + NQT + ++ AY K+ D A+
Sbjct: 453 VL-GTLLQAYERAGRIDRVPLILKGSFYEYVLVNQTSCSILVMAYVKHCLVDDAI 506
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 92/421 (21%), Positives = 182/421 (43%), Gaps = 43/421 (10%)
Query: 59 PKDLVLGTLVRLKQLKKWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKV 118
P G ++ L Q K WNV + +++S+ + + +IT Y + ++KAE+V
Sbjct: 241 PNVATFGMVMSLYQ-KGWNVADSEYAFSQMRSFGITCQSAYSAMITIYTRMSLYDKAEEV 299
Query: 119 LSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVE 178
+ F+ + ++ + L+ AY + G+ + AE + MQ++G P+ + Y +++ + +
Sbjct: 300 IDFIQEDKVILNLENWLVLLNAYSQQGKLQEAERVLFSMQNAGFSPNIVAYNMLITGYGK 359
Query: 179 ANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQS 238
A+ A+ +F L + L+PD+ + MI + +A
Sbjct: 360 ASNMDAAQHIFRNL---KNVGLEPDESTYRSMIEGWGRA--------------------- 395
Query: 239 TVTYNSLMSFETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEML 298
NYKE Y++++R G +P+ + +IN K E+A ++M
Sbjct: 396 -----------ENYKEAEWYYNELKRLGFKPNSSNLYTMINLQAKYADGEDAARTLDDMK 444
Query: 299 DAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDME 358
G + + LL A+ +G +D+ + K + + S + ++ AYV ++
Sbjct: 445 RIGCQYS-SVLGTLLQAYERAGRIDRVPLILKGSFYEYVLVNQTSCSILVMAYVKHCLVD 503
Query: 359 GAEKFF--RRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTT 416
A K ++ K F N+ Y +I ++ LE ++IY +M KPN I T
Sbjct: 504 DAIKVLQEKQWKDTIFEDNL--YHLVICSCKELGRLENAVKIYSQMP--NKKPNLHIMCT 559
Query: 417 IMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPN 476
++D Y F A Y +++S D A +I++ + + +A +L +
Sbjct: 560 MIDIYSTLGRFSDAENLYLKLKSSEISLDMIAFSIVVRMYVKSGSLKDACSVLETMDEQK 619
Query: 477 N 477
N
Sbjct: 620 N 620
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 48/225 (21%), Positives = 101/225 (44%), Gaps = 3/225 (1%)
Query: 257 KIYDQMQRAG-LQPDVVSYALLINAYGKARREEEALAVFEEML-DAGVRPTHKAYNILLD 314
K ++ M+ G L+ +V +Y L + G+ + A + EM D+ + + YN L+
Sbjct: 157 KFFEWMRENGKLEGNVSAYNLALRVLGRRGDWDAAETMIWEMNGDSDCQVNFQVYNTLIY 216
Query: 315 AFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVP 374
A G V+ F+ M + P++ ++ ++S Y ++ +E F +++ G
Sbjct: 217 ACYKQGHVELGTKWFRLMLENGVRPNVATFGMVMSLYQKGWNVADSEYAFSQMRSFGITC 276
Query: 375 NVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWY 434
Y +I Y +++ +K E+ D ++ + + N + +++AY + A
Sbjct: 277 QS-AYSAMITIYTRMSLYDKAEEVIDFIQEDKVILNLENWLVLLNAYSQQGKLQEAERVL 335
Query: 435 KEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEP 479
M++ GF P+ A N+L++ A + A + N + EP
Sbjct: 336 FSMQNAGFSPNIVAYNMLITGYGKASNMDAAQHIFRNLKNVGLEP 380
>gi|356532718|ref|XP_003534918.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
mitochondrial-like [Glycine max]
Length = 529
Score = 148 bits (374), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 98/386 (25%), Positives = 179/386 (46%), Gaps = 8/386 (2%)
Query: 88 IQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRY 147
+ + + + + L+ K G+ A K+L + + P+VV + +++ +
Sbjct: 107 VAQGFQMDHVSYGTLLNGLCKIGETRCAVKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLV 166
Query: 148 KNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEE-KSPLKPDQKM 206
A ++ M + G P A+TY ++ F + A +LLDE + P +
Sbjct: 167 NEAYDLYSEMDARGIFPDAITYTTLIYGFCLLGQLMGA----FSLLDEMILKNINPGVYI 222
Query: 207 FHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVS---KIYDQMQ 263
++++I K G ++A+ L A+M + G++ VTY++LM EV +I+ M
Sbjct: 223 YNILINALCKEGNVKEAKNLLAVMTKEGIKPGVVTYSTLMDGYCLVGEVQNAKQIFHAMV 282
Query: 264 RAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVD 323
+ G+ P+V SY ++IN K +R +EA+ + EML + P YN L+D SG +
Sbjct: 283 QMGVNPNVYSYNIMINGLCKCKRVDEAMNLLREMLHKNMVPDTVTYNSLIDGLCKSGRIT 342
Query: 324 QARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLI 383
A + M D+ +YT++L A +++ A F ++K+ G P + TY LI
Sbjct: 343 SALNLMNEMHHRGQPADVVTYTSLLDALCKNQNLDKATALFMKMKERGIQPTMYTYTALI 402
Query: 384 KGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFP 443
G K L+ E++ + V G + +T ++ K FD A+ +ME G
Sbjct: 403 DGLCKGGRLKNAQELFQHLLVKGCCIDVWTYTVMISGLCKEGMFDEALAIKSKMEDNGCI 462
Query: 444 PDQKAKNILLSLAKTADERNEANELL 469
P+ I++ DE ++A +LL
Sbjct: 463 PNAVTFEIIIRSLFEKDENDKAEKLL 488
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 85/386 (22%), Positives = 164/386 (42%), Gaps = 45/386 (11%)
Query: 63 VLGTLVRLKQLKKWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFM 122
+LG+L ++KQ +S+ +E I++ N + +LI + G + VL +
Sbjct: 16 ILGSLAKMKQYLTAISLSKQMEVKGIRA----NFVTLNILINCFCHLGQMAFSFSVLGKI 71
Query: 123 NKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKF 182
K GY P ++ LM+ G K + ++ + G + ++Y +L
Sbjct: 72 LKLGYQPDTITLNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDHVSYGTLLNGLC----- 126
Query: 183 KEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTY 242
K G A KL ++ +R + + V Y
Sbjct: 127 ---------------------------------KIGETRCAVKLLRMIEDRSTRPNVVMY 153
Query: 243 NSLMSFETNYKEVSKIYD---QMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLD 299
N+++ K V++ YD +M G+ PD ++Y LI + + A ++ +EM+
Sbjct: 154 NTIIDGLCKDKLVNEAYDLYSEMDARGIFPDAITYTTLIYGFCLLGQLMGAFSLLDEMIL 213
Query: 300 AGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEG 359
+ P YNIL++A G V +A+ + M ++ P + +Y+T++ Y +++
Sbjct: 214 KNINPGVYIYNILINALCKEGNVKEAKNLLAVMTKEGIKPGVVTYSTLMDGYCLVGEVQN 273
Query: 360 AEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMD 419
A++ F + Q G PNV +Y +I G K +++ M + +M + P+ + +++D
Sbjct: 274 AKQIFHAMVQMGVNPNVYSYNIMINGLCKCKRVDEAMNLLREMLHKNMVPDTVTYNSLID 333
Query: 420 AYGKNKDFDSAVVWYKEMESCGFPPD 445
K+ SA+ EM G P D
Sbjct: 334 GLCKSGRITSALNLMNEMHHRGQPAD 359
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 83/344 (24%), Positives = 148/344 (43%), Gaps = 6/344 (1%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
+I K N+A + S M+ +G P +++T L+ + G+ A ++ M
Sbjct: 156 IIDGLCKDKLVNEAYDLYSEMDARGIFPDAITYTTLIYGFCLLGQLMGAFSLLDEMILKN 215
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
P Y I++ + KEA+ + + K +KP + ++ Y G +
Sbjct: 216 INPGVYIYNILINALCKEGNVKEAKNLLAVM---TKEGIKPGVVTYSTLMDGYCLVGEVQ 272
Query: 222 KARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSK---IYDQMQRAGLQPDVVSYALLI 278
A+++F M + GV + +YN +++ K V + + +M + PD V+Y LI
Sbjct: 273 NAKQIFHAMVQMGVNPNVYSYNIMINGLCKCKRVDEAMNLLREMLHKNMVPDTVTYNSLI 332
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCS 338
+ K+ R AL + EM G Y LLDA + +D+A +F M+
Sbjct: 333 DGLCKSGRITSALNLMNEMHHRGQPADVVTYTSLLDALCKNQNLDKATALFMKMKERGIQ 392
Query: 339 PDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEI 398
P + +YT ++ ++ A++ F+ L G +V TY +I G K ++ + I
Sbjct: 393 PTMYTYTALIDGLCKGGRLKNAQELFQHLLVKGCCIDVWTYTVMISGLCKEGMFDEALAI 452
Query: 399 YDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGF 442
KM NG PN F I+ + + + D A EM + G
Sbjct: 453 KSKMEDNGCIPNAVTFEIIIRSLFEKDENDKAEKLLHEMIAKGL 496
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 45/213 (21%), Positives = 95/213 (44%)
Query: 269 PDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTV 328
P ++ + ++ + K ++ A+++ ++M G+R NIL++ F G + + +V
Sbjct: 8 PPIIEFNKILGSLAKMKQYLTAISLSKQMEVKGIRANFVTLNILINCFCHLGQMAFSFSV 67
Query: 329 FKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAK 388
+ + PD + T++ +++ + F ++ GF + ++YGTL+ G K
Sbjct: 68 LGKILKLGYQPDTITLNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDHVSYGTLLNGLCK 127
Query: 389 VNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKA 448
+ +++ + +PN ++ TI+D K+K + A Y EM++ G PD
Sbjct: 128 IGETRCAVKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIFPDAIT 187
Query: 449 KNILLSLAKTADERNEANELLGNFNHPNNEPGI 481
L+ + A LL N PG+
Sbjct: 188 YTTLIYGFCLLGQLMGAFSLLDEMILKNINPGV 220
>gi|255661130|gb|ACU25734.1| pentatricopeptide repeat-containing protein [Verbena orcuttiana]
Length = 426
Score = 148 bits (374), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 97/374 (25%), Positives = 181/374 (48%), Gaps = 37/374 (9%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
LI K D++KA + S + + G+ P +V++ A++ +G+ ++ A ++ M+++G
Sbjct: 50 LIELSRKLCDYSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMRTAG 109
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
P+ +Y +L ++VE KF EA VF + E K L D ++MI +Y + G +
Sbjct: 110 VTPNTASYSTLLTMYVENKKFLEALSVFAEM-REIKCLL--DLTTCNIMIDVYGQLGMAK 166
Query: 222 KARKLFALMAERGVQQSTVTYNSLMSFETN---YKEVSKIYDQMQRAGLQPDVVSYALLI 278
+A KLF M + G++ + V+YN+L+ + + E ++ MQR + +VV+Y ++
Sbjct: 167 EADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIDQNVVTYNSMM 226
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCS 338
YGK +A + +EM + G+ P Y+ ++ + G +D+A +F+ +R
Sbjct: 227 MIYGKTLEHVKANNLIQEMQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVD 286
Query: 339 PDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVP------------------------ 374
D Y TM+ AY A + A++ LK+ +P
Sbjct: 287 IDQVLYQTMIVAYERAGLVAHAKRLLHELKRPDNIPRDIAIHILAGAGRIEEATWVFRQA 346
Query: 375 -------NVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDF 427
++ + +I ++K ++E++DKMR G P+ + I++AYGK +F
Sbjct: 347 IDAGEVKDITVFERMIHLFSKYKKYGNVVEVFDKMRGLGYFPDSNVIALILNAYGKLHEF 406
Query: 428 DSAVVWYKEMESCG 441
D A Y EM+ G
Sbjct: 407 DKANDVYMEMQEVG 420
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 84/318 (26%), Positives = 142/318 (44%), Gaps = 38/318 (11%)
Query: 200 LKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFE---TNYKEVS 256
L PD+ + +I + K G ++ A M + V V Y++L+ +Y +
Sbjct: 5 LSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDYSKAI 64
Query: 257 KIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAF 316
I+ +++R+G PD+V+Y +IN +GKA+ EA ++ EM AGV P +Y+ LL +
Sbjct: 65 SIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVTPNTASYSTLLTMY 124
Query: 317 AISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNV 376
+ +A +VF MR +C D+ + M+ Y + A+K F +++ G PNV
Sbjct: 125 VENKKFLEALSVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNV 184
Query: 377 ITYGTLIKGYA----------------------KVNNLEKMMEIYDK------------- 401
++Y TL++ Y V MM IY K
Sbjct: 185 VSYNTLLRVYGDAELFGEAIHLFRLMQRKNIDQNVVTYNSMMMIYGKTLEHVKANNLIQE 244
Query: 402 MRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADE 461
M+ GI+PN ++TI+ +GK D A + ++++ S G DQ ++ + A
Sbjct: 245 MQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVDIDQVLYQTMIVAYERAGL 304
Query: 462 RNEANELLGNFNHPNNEP 479
A LL P+N P
Sbjct: 305 VAHAKRLLHELKRPDNIP 322
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 45/181 (24%), Positives = 79/181 (43%)
Query: 301 GVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGA 360
+ P Y+ L+ F G+ D A + + M +DR D+ Y+ ++ D A
Sbjct: 4 ALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDYSKA 63
Query: 361 EKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDA 420
F RLK+ GF P+++ Y +I + K + + +MR G+ PN ++T++
Sbjct: 64 ISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVTPNTASYSTLLTM 123
Query: 421 YGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPG 480
Y +NK F A+ + EM D NI++ + EA++L EP
Sbjct: 124 YVENKKFLEALSVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPN 183
Query: 481 I 481
+
Sbjct: 184 V 184
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/244 (22%), Positives = 113/244 (46%), Gaps = 6/244 (2%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + + L+ YG F +A + M +K +VV++ ++M YG+ + A +
Sbjct: 183 NVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIDQNVVTYNSMMMIYGKTLEHVKANNLI 242
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
+ MQ+ G P+++TY I+ ++ + K A +F L S + DQ ++ MI Y
Sbjct: 243 QEMQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKL---RSSGVDIDQVLYQTMIVAY 299
Query: 215 KKAGGYEKARKLFA-LMAERGVQQSTVTYNSLMSFETNYKEVSKIYDQMQRAGLQPDVVS 273
++AG A++L L + + + +++ +E + ++ Q AG D+
Sbjct: 300 ERAGLVAHAKRLLHELKRPDNIPRDIAIH--ILAGAGRIEEATWVFRQAIDAGEVKDITV 357
Query: 274 YALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMR 333
+ +I+ + K ++ + VF++M G P ++L+A+ D+A V+ M+
Sbjct: 358 FERMIHLFSKYKKYGNVVEVFDKMRGLGYFPDSNVIALILNAYGKLHEFDKANDVYMEMQ 417
Query: 334 RDRC 337
C
Sbjct: 418 EVGC 421
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/123 (22%), Positives = 64/123 (52%)
Query: 333 RRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNL 392
R SPD +Y+T+++ + + A + ++++QD +++ Y LI+ K+ +
Sbjct: 1 RERALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDY 60
Query: 393 EKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNIL 452
K + I+ +++ +G P+ + +++ +GK K F A EM + G P+ + + L
Sbjct: 61 SKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVTPNTASYSTL 120
Query: 453 LSL 455
L++
Sbjct: 121 LTM 123
>gi|222637127|gb|EEE67259.1| hypothetical protein OsJ_24425 [Oryza sativa Japonica Group]
Length = 799
Score = 148 bits (374), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 87/342 (25%), Positives = 168/342 (49%), Gaps = 6/342 (1%)
Query: 99 FLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQ 158
F +++ + ++GD A M K+G A V++TAL+ R G K AE + + M+
Sbjct: 358 FTTVMSGFCRKGDLAAARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEAERVLQEME 417
Query: 159 SSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAG 218
G A+TY +++ + + K EA V ++ + + P+ + + K G
Sbjct: 418 DKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKR---VTPNVVTYTALSDGLCKQG 474
Query: 219 GYEKARKLFALMAERGVQQSTVTYNSL---MSFETNYKEVSKIYDQMQRAGLQPDVVSYA 275
A +L M +G++ + TYNSL + N ++ + M AGL+PDV +Y
Sbjct: 475 DVCAANELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYT 534
Query: 276 LLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRD 335
+I A +++ + A ++ +EMLD G++PT YN+L++ F +SG V+ + + + M
Sbjct: 535 TIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEK 594
Query: 336 RCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKM 395
P+ +Y +++ Y +M+ + ++ + VPN TY LIKG+ K N+++
Sbjct: 595 NIHPNTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQEVVPNENTYNILIKGHCKARNMKEA 654
Query: 396 MEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEM 437
+ + +M G + + + ++ K K F A +++M
Sbjct: 655 LYFHSEMIEKGFRLTASSYNALIRLLNKKKKFTEARRLFEKM 696
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 91/331 (27%), Positives = 147/331 (44%), Gaps = 44/331 (13%)
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
P + +Y I+LK A + K+A ++F DE SP PD + +M++ Y E
Sbjct: 249 PEKNTCSYNILLKALCTAGRIKDAHQLF----DEMASP--PDVVTYGIMVHGYCTLSELE 302
Query: 222 KARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSKI----------------------- 258
A KL + MA RG++ + V Y S+++ + +VS
Sbjct: 303 TAIKLLSEMAARGLELNPVAYTSVIALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVM 362
Query: 259 ---------------YDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVR 303
+D+MQ+ GL D V+Y LIN +A +EA V +EM D G+
Sbjct: 363 SGFCRKGDLAAARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLD 422
Query: 304 PTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKF 363
Y +L+D + G + +A V M + R +P++ +YT + D+ A +
Sbjct: 423 VDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANEL 482
Query: 364 FRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGK 423
+ G N+ TY +LI G K NLE+ M M G+KP+ +TTI+ A +
Sbjct: 483 LHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQ 542
Query: 424 NKDFDSAVVWYKEMESCGFPPDQKAKNILLS 454
+K+ D A +EM G P N+L++
Sbjct: 543 SKELDRAHSLLQEMLDKGIKPTIVTYNVLMN 573
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 102/440 (23%), Positives = 188/440 (42%), Gaps = 8/440 (1%)
Query: 93 DFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEA 152
+ N + + +I +G + A +V+ M G T +M + R G A
Sbjct: 317 ELNPVAYTSVIALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGDLAAARN 376
Query: 153 IFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIY 212
F MQ G +TY ++ A + KEAE V L + E L D + ++I
Sbjct: 377 WFDEMQKRGLAADGVTYTALINGLCRAGELKEAERV---LQEMEDKGLDVDAVTYTVLID 433
Query: 213 MYKKAGGYEKARKLFALMAERGVQQSTVTYNSL---MSFETNYKEVSKIYDQMQRAGLQP 269
Y K G +A + M ++ V + VTY +L + + + +++ +M GL+
Sbjct: 434 GYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLEL 493
Query: 270 DVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVF 329
++ +Y LIN KA E+A+ +M +AG++P Y ++ A S +D+A ++
Sbjct: 494 NIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSLL 553
Query: 330 KCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKV 389
+ M P I +Y +++ + + +EG ++ + + PN TY +L+K Y
Sbjct: 554 QEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIE 613
Query: 390 NNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAK 449
N++ EIY M + PN+ + ++ + K ++ A+ ++ EM GF +
Sbjct: 614 KNMKSTTEIYKGMLSQEVVPNENTYNILIKGHCKARNMKEALYFHSEMIEKGFRLTASSY 673
Query: 450 NILLSLAKTADERNEANELLGNFNHP--NNEPGINGLSISVDEEDDDDDDDEDDDDNIYH 507
N L+ L + EA L EP + I + +D+ + D +
Sbjct: 674 NALIRLLNKKKKFTEARRLFEKMRKERLTAEPDVYNFYIDLSFNEDNLESTLALCDELVE 733
Query: 508 DGDGDGDGDDNEDDAEETIA 527
D ++D AEE I+
Sbjct: 734 VTLVKSIADTDDDFAEEHIS 753
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 57/238 (23%), Positives = 103/238 (43%), Gaps = 8/238 (3%)
Query: 236 QQSTVTYNSLM---SFETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALA 292
+++T +YN L+ K+ +++D+M PDVV+Y ++++ Y E A+
Sbjct: 250 EKNTCSYNILLKALCTAGRIKDAHQLFDEMASP---PDVVTYGIMVHGYCTLSELETAIK 306
Query: 293 VFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYV 352
+ EM G+ AY ++ G V A V + M D +TT++S +
Sbjct: 307 LLSEMAARGLELNPVAYTSVIALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFC 366
Query: 353 NASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQT 412
D+ A +F +++ G + +TY LI G + L++ + +M G+ +
Sbjct: 367 RKGDLAAARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAV 426
Query: 413 IFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILL-SLAKTADERNEANELL 469
+T ++D Y K A + + +M P+ L L K D ANELL
Sbjct: 427 TYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDV-CAANELL 483
>gi|115471647|ref|NP_001059422.1| Os07g0300200 [Oryza sativa Japonica Group]
gi|34394343|dbj|BAC84898.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
gi|50509027|dbj|BAD31989.1| putative fertility restorer [Oryza sativa Japonica Group]
gi|113610958|dbj|BAF21336.1| Os07g0300200 [Oryza sativa Japonica Group]
Length = 1013
Score = 148 bits (374), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 93/374 (24%), Positives = 179/374 (47%), Gaps = 10/374 (2%)
Query: 101 MLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSS 160
++I + + A ++LS M G +P+V +++ ++ + G + A + M +
Sbjct: 424 LIIEGHFRHHSKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTK 483
Query: 161 GPRPSALTYQIILKLFVEANKFKEAEEVF--MTLLDEEKSPLKPDQKMFHMMIYMYKKAG 218
G +P+A Y ++ + A E+F MT K + PD ++ +I+ K G
Sbjct: 484 GLKPNAFVYAPLISGYCREGNVSLACEIFDKMT-----KVNVLPDLYCYNSLIFGLSKVG 538
Query: 219 GYEKARKLFALMAERGVQQSTVTYNSLMSF---ETNYKEVSKIYDQMQRAGLQPDVVSYA 275
E++ K FA M ERG+ + TY+ L+ + + ++ +M GL+P+ V Y
Sbjct: 539 RVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYI 598
Query: 276 LLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRD 335
L+ +Y K+ E+ + F+ MLD GV ++ Y IL+ + SG ++ A V + ++
Sbjct: 599 DLLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSGIEKN 658
Query: 336 RCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKM 395
PD+ Y++++S +D E A + + G PN++ Y LI G K ++
Sbjct: 659 GSVPDVHVYSSLISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYA 718
Query: 396 MEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSL 455
+++ + G+ PN +T+++D K D +A Y EM + G PD ++L +
Sbjct: 719 RNVFNSILAKGLVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLATGITPDAFVYSVLTTG 778
Query: 456 AKTADERNEANELL 469
+A + +A L+
Sbjct: 779 CSSAGDLEQAMFLI 792
Score = 145 bits (365), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 107/436 (24%), Positives = 196/436 (44%), Gaps = 50/436 (11%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
LI AY K +F+ A+KVL M ++G + V++ L+ R G + A + M+ G
Sbjct: 250 LIEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGAVEEAFGFKKDMEDYG 309
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDE-EKSPLKPDQKMFHMMIYMYKKAGGY 220
P TY ++ ++ + EA+ LLDE + LKP+ ++ +I + + G
Sbjct: 310 LVPDGFTYGALINGLCKSRRSNEAK----ALLDEMSCAELKPNVVVYANLIDGFMREGNA 365
Query: 221 EKARKLFALMAERGVQQSTVTYNSL---------------------------------MS 247
++A K+ M GVQ + +TY++L +
Sbjct: 366 DEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYNLI 425
Query: 248 FETNYKEVSK-----IYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGV 302
E +++ SK + +M+ AG+ P+V +Y+++I+ ++ E+A + EEM G+
Sbjct: 426 IEGHFRHHSKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGL 485
Query: 303 RPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEK 362
+P Y L+ + G V A +F M + PD+ Y +++ +E + K
Sbjct: 486 KPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTK 545
Query: 363 FFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYG 422
+F ++++ G +PN TY LI GY K +LE ++ +M G+KPN I+ ++++Y
Sbjct: 546 YFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYF 605
Query: 423 KNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPG-- 480
K+ D + +K M G D + IL+ ++ A +L + P
Sbjct: 606 KSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSGIEKNGSVPDVH 665
Query: 481 -----INGLSISVDEE 491
I+GL + D E
Sbjct: 666 VYSSLISGLCKTADRE 681
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 87/356 (24%), Positives = 163/356 (45%), Gaps = 6/356 (1%)
Query: 101 MLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSS 160
+L+ Y K G A +V+ M +G APS+ AL++ R + M +
Sbjct: 179 VLVDTYKKSGRVQDAAEVVLMMRDRGMAPSIRCCNALLKDLLRADAMALLWKVREFMVGA 238
Query: 161 GPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGY 220
G P TY +++ + + +F A++V L++ + + ++++I ++G
Sbjct: 239 GISPDVYTYSTLIEAYCKVREFDTAKKV---LVEMRERGCGLNTVTYNVLIAGLCRSGAV 295
Query: 221 EKARKLFALMAERGVQQSTVTYNSLMSFETNYK---EVSKIYDQMQRAGLQPDVVSYALL 277
E+A M + G+ TY +L++ + E + D+M A L+P+VV YA L
Sbjct: 296 EEAFGFKKDMEDYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANL 355
Query: 278 INAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRC 337
I+ + + +EA + +EM+ AGV+P Y+ L+ G +D+A + K M RD
Sbjct: 356 IDGFMREGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSH 415
Query: 338 SPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMME 397
PD +Y ++ + + A + ++ G PNV TY +I G + EK +
Sbjct: 416 RPDTITYNLIIEGHFRHHSKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASD 475
Query: 398 IYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILL 453
+ ++M G+KPN ++ ++ Y + + A + +M PD N L+
Sbjct: 476 LLEEMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLI 531
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 81/332 (24%), Positives = 152/332 (45%), Gaps = 7/332 (2%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + LI+ Y ++G+ + A ++ M K P + + +L+ + GR + + F
Sbjct: 488 NAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYF 547
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
+MQ G P+ TY ++ +++ + AE++ +LD + LKP+ ++ ++ Y
Sbjct: 548 AQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLD---TGLKPNDVIYIDLLESY 604
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSL---MSFETNYKEVSKIYDQMQRAGLQPDV 271
K+ EK F M ++GV Y L +S N + ++ +++ G PDV
Sbjct: 605 FKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSGIEKNGSVPDV 664
Query: 272 VSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKC 331
Y+ LI+ K E+A + +EM GV P YN L+D SG + AR VF
Sbjct: 665 HVYSSLISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNS 724
Query: 332 MRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNN 391
+ P+ +YT+++ D+ A + + G P+ Y L G + +
Sbjct: 725 ILAKGLVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLATGITPDAFVYSVLTTGCSSAGD 784
Query: 392 LEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGK 423
LE+ M + ++M + G + + F ++D + K
Sbjct: 785 LEQAMFLIEEMFLRG-HASISSFNNLVDGFCK 815
Score = 99.0 bits (245), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 95/434 (21%), Positives = 164/434 (37%), Gaps = 60/434 (13%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
NE + LI Y K GD AE+++ M G P+ V + L+E+Y + + + F
Sbjct: 558 NEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTF 617
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
+ M G Y I++ + E F L EK+ PD ++ +I
Sbjct: 618 KSMLDQGVMLDNRIYGILIHNLSSSGNM---EAAFRVLSGIEKNGSVPDVHVYSSLISGL 674
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVS---KIYDQMQRAGLQPDV 271
K EKA + M+++GV + V YN+L+ ++S +++ + GL P+
Sbjct: 675 CKTADREKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSILAKGLVPNC 734
Query: 272 VSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKC 331
V+Y LI+ K A ++ EML G+ P Y++L + +G ++QA + +
Sbjct: 735 VTYTSLIDGSCKVGDISNAFYLYNEMLATGITPDAFVYSVLTTGCSSAGDLEQAMFLIEE 794
Query: 332 MRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKG------ 385
M R I S+ ++ + M+ K + G VPN +T +I G
Sbjct: 795 MFL-RGHASISSFNNLVDGFCKRGKMQETLKLLHVIMGRGLVPNALTIENIISGLSEAGK 853
Query: 386 -----------------------------------------------YAKVNNLEKMMEI 398
+ K NL+K + +
Sbjct: 854 LSEVHTIFVELQQKTSESAARHFSSLFMDMINQGKIPLDVVDDMIRDHCKEGNLDKALML 913
Query: 399 YDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKT 458
D + + + I+D + A+ KEM+ G P + ILL+ T
Sbjct: 914 RDVIVAKSAPMGCSSYLAIVDNLCRKGKLSEALNLLKEMDKRGICPSENQCLILLTNLHT 973
Query: 459 ADERNEANELLGNF 472
+ E N +L N
Sbjct: 974 SGYIQEHNTVLDNM 987
Score = 95.9 bits (237), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 69/283 (24%), Positives = 125/283 (44%), Gaps = 3/283 (1%)
Query: 209 MMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVS---KIYDQMQRA 265
+++ YKK+G + A ++ +M +RG+ S N+L+ ++ K+ + M A
Sbjct: 179 VLVDTYKKSGRVQDAAEVVLMMRDRGMAPSIRCCNALLKDLLRADAMALLWKVREFMVGA 238
Query: 266 GLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQA 325
G+ PDV +Y+ LI AY K R + A V EM + G YN+L+ SG V++A
Sbjct: 239 GISPDVYTYSTLIEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGAVEEA 298
Query: 326 RTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKG 385
K M PD +Y +++ + A+ + PNV+ Y LI G
Sbjct: 299 FGFKKDMEDYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANLIDG 358
Query: 386 YAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPD 445
+ + N ++ ++ +M G++PN+ + ++ K D A + K+M PD
Sbjct: 359 FMREGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPD 418
Query: 446 QKAKNILLSLAKTADERNEANELLGNFNHPNNEPGINGLSISV 488
N+++ + +A LL + P + SI +
Sbjct: 419 TITYNLIIEGHFRHHSKKDAFRLLSEMENAGISPNVYTYSIMI 461
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 80/190 (42%), Gaps = 1/190 (0%)
Query: 292 AVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAY 351
++ + D+G R + ++L+D + SG V A V MR +P I +L
Sbjct: 161 SIHRALSDSGHR-SPAVLDVLVDTYKKSGRVQDAAEVVLMMRDRGMAPSIRCCNALLKDL 219
Query: 352 VNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQ 411
+ A M K + G P+V TY TLI+ Y KV + ++ +MR G N
Sbjct: 220 LRADAMALLWKVREFMVGAGISPDVYTYSTLIEAYCKVREFDTAKKVLVEMRERGCGLNT 279
Query: 412 TIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGN 471
+ ++ ++ + A + K+ME G PD L++ + NEA LL
Sbjct: 280 VTYNVLIAGLCRSGAVEEAFGFKKDMEDYGLVPDGFTYGALINGLCKSRRSNEAKALLDE 339
Query: 472 FNHPNNEPGI 481
+ +P +
Sbjct: 340 MSCAELKPNV 349
>gi|449446442|ref|XP_004140980.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
mitochondrial-like [Cucumis sativus]
Length = 1000
Score = 148 bits (374), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 98/395 (24%), Positives = 182/395 (46%), Gaps = 27/395 (6%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + F + +GK F KA KV+ M G+ P +++ ++ R +NA +F
Sbjct: 456 NVVSFARCLCGFGK---FEKAYKVIHEMMGNGFVPDTSTYSEVIGFLCNASRVENAFFLF 512
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDE-EKSPLKPDQKMFHMMIYM 213
+ M+ +G P TY I++ F +A K+A LDE + +P + +I+
Sbjct: 513 KEMKGTGVVPDVYTYTILIDCFSKAGIIKQAH----NWLDEMVRDGCEPTVVTYTTLIHA 568
Query: 214 YKKAGGYEKARKLFALMAERGVQQSTVTYNSLM---SFETNYKEVSKIYDQMQ------- 263
Y KA A +LF LM +G + +TY +L+ N ++ +IY +M+
Sbjct: 569 YLKAKKVSVANELFELMIAKGCFPNVITYTALIDGYCKSGNIEKACQIYARMRGDADIPD 628
Query: 264 ---------RAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLD 314
+P+VV+Y L++ KA + ++A + E M G P Y+ L+D
Sbjct: 629 VDMYFKIKNNVAEKPNVVTYGALVDGLCKAHKVKDARDLLETMFVDGCEPNTIVYDALID 688
Query: 315 AFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVP 374
F + +D+A+ VF M +P++ +Y++++ ++ K ++ ++ P
Sbjct: 689 GFCKAAKLDEAQEVFHKMVEHGYNPNVYTYSSLIDRLFKDKRLDLVLKVLSKMLENSCAP 748
Query: 375 NVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWY 434
N++ Y +I G +KV ++ ++ M G KPN +T ++D +GK D + +
Sbjct: 749 NIVIYTEMIDGLSKVAKTDEAYKLMLMMEEKGCKPNVVTYTAMIDGFGKAGKVDKCLELF 808
Query: 435 KEMESCGFPPDQKAKNILLSLAKTADERNEANELL 469
+EM S G P+ +L++ +EA LL
Sbjct: 809 REMGSKGCAPNFVTYTVLINHCCATGHLDEAYALL 843
Score = 136 bits (342), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 107/445 (24%), Positives = 180/445 (40%), Gaps = 66/445 (14%)
Query: 105 AYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRP 164
A K G + +A LS + K+ + P+ + + ++ ++ A RM+S+ P
Sbjct: 285 ALCKVGKWREA---LSLIEKEDFVPNTILYNKMISGLCEASFFEEAMDFLNRMRSTSCIP 341
Query: 165 SALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKAR 224
+ TY+I+L + + + + ++ E P +F+ +++ Y K+ + A
Sbjct: 342 NVQTYRILLCGCLNKKQLGRCKRILSMMIAEG---CYPSYTIFNSLVHAYCKSDDFSYAY 398
Query: 225 KLFALMAERGVQQSTVTYNSLM-------------SFET--------------------- 250
KL M + + V YN L+ +FE
Sbjct: 399 KLLKKMEKCECKPGYVVYNILIGSICSGGELPGPVTFELAEKAYNEMLSAGTVLNKVNVV 458
Query: 251 ----------NYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDA 300
+++ K+ +M G PD +Y+ +I A R E A +F+EM
Sbjct: 459 SFARCLCGFGKFEKAYKVIHEMMGNGFVPDTSTYSEVIGFLCNASRVENAFFLFKEMKGT 518
Query: 301 GVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGA 360
GV P Y IL+D F+ +G++ QA M RD C P + +YTT++ AY+ A + A
Sbjct: 519 GVVPDVYTYTILIDCFSKAGIIKQAHNWLDEMVRDGCEPTVVTYTTLIHAYLKAKKVSVA 578
Query: 361 EKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMR--------------VNG 406
+ F + G PNVITY LI GY K N+EK +IY +MR N
Sbjct: 579 NELFELMIAKGCFPNVITYTALIDGYCKSGNIEKACQIYARMRGDADIPDVDMYFKIKNN 638
Query: 407 I--KPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNE 464
+ KPN + ++D K A + M G P+ + L+ A + +E
Sbjct: 639 VAEKPNVVTYGALVDGLCKAHKVKDARDLLETMFVDGCEPNTIVYDALIDGFCKAAKLDE 698
Query: 465 ANELLGNFNHPNNEPGINGLSISVD 489
A E+ P + S +D
Sbjct: 699 AQEVFHKMVEHGYNPNVYTYSSLID 723
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 81/362 (22%), Positives = 165/362 (45%), Gaps = 18/362 (4%)
Query: 99 FLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQ 158
+ +LI + K G +A L M + G P+VV++T L+ AY + + A +F M
Sbjct: 527 YTILIDCFSKAGIIKQAHNWLDEMVRDGCEPTVVTYTTLIHAYLKAKKVSVANELFELMI 586
Query: 159 SSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSP-------------LKPDQK 205
+ G P+ +TY ++ + ++ ++A +++ + + P KP+
Sbjct: 587 AKGCFPNVITYTALIDGYCKSGNIEKACQIYARMRGDADIPDVDMYFKIKNNVAEKPNVV 646
Query: 206 MFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLM-SFETNYK--EVSKIYDQM 262
+ ++ KA + AR L M G + +T+ Y++L+ F K E +++ +M
Sbjct: 647 TYGALVDGLCKAHKVKDARDLLETMFVDGCEPNTIVYDALIDGFCKAAKLDEAQEVFHKM 706
Query: 263 QRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMV 322
G P+V +Y+ LI+ K +R + L V +ML+ P Y ++D +
Sbjct: 707 VEHGYNPNVYTYSSLIDRLFKDKRLDLVLKVLSKMLENSCAPNIVIYTEMIDGLSKVAKT 766
Query: 323 DQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTL 382
D+A + M C P++ +YT M+ + A ++ + FR + G PN +TY L
Sbjct: 767 DEAYKLMLMMEEKGCKPNVVTYTAMIDGFGKAGKVDKCLELFREMGSKGCAPNFVTYTVL 826
Query: 383 IKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGF 442
I +L++ + ++M+ + + + +++ Y ++F ++ +E+E G
Sbjct: 827 INHCCATGHLDEAYALLEEMKQTYWPKHVSSYCKVIEGY--KREFILSLGLLEEVEKNGS 884
Query: 443 PP 444
P
Sbjct: 885 AP 886
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 94/441 (21%), Positives = 177/441 (40%), Gaps = 92/441 (20%)
Query: 51 ERTRGQPLPKDLVLGTLVR-LKQLKKWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQ 109
E R P + TL+ + KK +V +E+ E + + + N + + LI Y K
Sbjct: 549 EMVRDGCEPTVVTYTTLIHAYLKAKKVSVANELFELMIAKGCFP-NVITYTALIDGYCKS 607
Query: 110 GDFNKAEKVLSFM----------------NKKGYAPSVVSHTALMEAYGRGGRYKNAEAI 153
G+ KA ++ + M N P+VV++ AL++ + + K+A +
Sbjct: 608 GNIEKACQIYARMRGDADIPDVDMYFKIKNNVAEKPNVVTYGALVDGLCKAHKVKDARDL 667
Query: 154 FRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSP-------------- 199
M G P+ + Y ++ F +A K EA+EVF +++ +P
Sbjct: 668 LETMFVDGCEPNTIVYDALIDGFCKAAKLDEAQEVFHKMVEHGYNPNVYTYSSLIDRLFK 727
Query: 200 ------------------LKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVT 241
P+ ++ MI K ++A KL +M E+G + + VT
Sbjct: 728 DKRLDLVLKVLSKMLENSCAPNIVIYTEMIDGLSKVAKTDEAYKLMLMMEEKGCKPNVVT 787
Query: 242 YNSLMSFETNYKEVSK---IYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEML 298
Y +++ +V K ++ +M G P+ V+Y +LIN +EA A+ EEM
Sbjct: 788 YTAMIDGFGKAGKVDKCLELFREMGSKGCAPNFVTYTVLINHCCATGHLDEAYALLEEMK 847
Query: 299 DA---------------------------------GVRPTHKAYNILLDAFAISGMVDQA 325
G P Y +L+D F +G ++ A
Sbjct: 848 QTYWPKHVSSYCKVIEGYKREFILSLGLLEEVEKNGSAPIILLYKVLIDNFVKAGRLEVA 907
Query: 326 RTVFKCMRRDRCSPDICS----YTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGT 381
+ K S + + YT+++ ++ AS + A + F + +DG +P++ T+
Sbjct: 908 LELHK--EVISASMSMAAKKNLYTSLIYSFSYASKIGHAFELFYDMIRDGVIPDLGTFVH 965
Query: 382 LIKGYAKVNNLEKMMEIYDKM 402
L+ G +V E+ +++ D +
Sbjct: 966 LLMGLIRVRRWEEALQLSDSL 986
Score = 78.6 bits (192), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 83/193 (43%), Gaps = 3/193 (1%)
Query: 261 QMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISG 320
+++ G +P ++Y L+ + +A + + A V EM + G+ A G
Sbjct: 231 RLKDFGYKPTRMTYNALVQVFLRADKLDTAQLVHREMSELGLSMDEFTLGFFAQALCKVG 290
Query: 321 MVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYG 380
+ R + ++ P+ Y M+S AS E A F R++ +PNV TY
Sbjct: 291 ---KWREALSLIEKEDFVPNTILYNKMISGLCEASFFEEAMDFLNRMRSTSCIPNVQTYR 347
Query: 381 TLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESC 440
L+ G L + I M G P+ TIF +++ AY K+ DF A K+ME C
Sbjct: 348 ILLCGCLNKKQLGRCKRILSMMIAEGCYPSYTIFNSLVHAYCKSDDFSYAYKLLKKMEKC 407
Query: 441 GFPPDQKAKNILL 453
P NIL+
Sbjct: 408 ECKPGYVVYNILI 420
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 70/397 (17%), Positives = 141/397 (35%), Gaps = 44/397 (11%)
Query: 126 GYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEA 185
GY + + AL++ + RG + E R ++ ++++ + A
Sbjct: 166 GYDHTPAVYIALLDVFERGSYDRVPEEFLREIRGDDKEVLGKLLNVLIRKCCRNGLWNVA 225
Query: 186 EEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSL 245
E L D KP + ++ ++ ++ +A + A+ + M+E G+ T
Sbjct: 226 LEELGRLKD---FGYKPTRMTYNALVQVFLRADKLDTAQLVHREMSELGLSMDEFTLGFF 282
Query: 246 MSFETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPT 305
+ + +++ P+ + Y +I+ +A EEA+ M P
Sbjct: 283 AQALCKVGKWREALSLIEKEDFVPNTILYNKMISGLCEASFFEEAMDFLNRMRSTSCIPN 342
Query: 306 HKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFR 365
+ Y ILL + + + + M + C P + +++ AY + D A K +
Sbjct: 343 VQTYRILLCGCLNKKQLGRCKRILSMMIAEGCYPSYTIFNSLVHAYCKSDDFSYAYKLLK 402
Query: 366 RLKQDGFVPNVITYGTLI-------------------KGY----------AKVN------ 390
++++ P + Y LI K Y KVN
Sbjct: 403 KMEKCECKPGYVVYNILIGSICSGGELPGPVTFELAEKAYNEMLSAGTVLNKVNVVSFAR 462
Query: 391 ------NLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPP 444
EK ++ +M NG P+ + ++ ++ ++A +KEM+ G P
Sbjct: 463 CLCGFGKFEKAYKVIHEMMGNGFVPDTSTYSEVIGFLCNASRVENAFFLFKEMKGTGVVP 522
Query: 445 DQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGI 481
D IL+ A +A+ L EP +
Sbjct: 523 DVYTYTILIDCFSKAGIIKQAHNWLDEMVRDGCEPTV 559
>gi|222623994|gb|EEE58126.1| hypothetical protein OsJ_09025 [Oryza sativa Japonica Group]
Length = 1269
Score = 148 bits (374), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 93/374 (24%), Positives = 179/374 (47%), Gaps = 10/374 (2%)
Query: 101 MLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSS 160
++I + + A ++LS M G +P+V +++ ++ + G + A + M +
Sbjct: 402 LIIEGHFRHHSKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTK 461
Query: 161 GPRPSALTYQIILKLFVEANKFKEAEEVF--MTLLDEEKSPLKPDQKMFHMMIYMYKKAG 218
G +P+A Y ++ + A E+F MT K + PD ++ +I+ K G
Sbjct: 462 GLKPNAFVYAPLISGYCREGNVSLACEIFDKMT-----KVNVLPDLYCYNSLIFGLSKVG 516
Query: 219 GYEKARKLFALMAERGVQQSTVTYNSLMSF---ETNYKEVSKIYDQMQRAGLQPDVVSYA 275
E++ K FA M ERG+ + TY+ L+ + + ++ +M GL+P+ V Y
Sbjct: 517 RVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYI 576
Query: 276 LLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRD 335
L+ +Y K+ E+ + F+ MLD GV ++ Y IL+ + SG ++ A V + ++
Sbjct: 577 DLLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSGIEKN 636
Query: 336 RCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKM 395
PD+ Y++++S +D E A + + G PN++ Y LI G K ++
Sbjct: 637 GSVPDVHVYSSLISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYA 696
Query: 396 MEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSL 455
+++ + G+ PN +T+++D K D +A Y EM + G PD ++L +
Sbjct: 697 RNVFNSILAKGLVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLATGITPDAFVYSVLTTG 756
Query: 456 AKTADERNEANELL 469
+A + +A L+
Sbjct: 757 CSSAGDLEQAMFLI 770
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 105/435 (24%), Positives = 195/435 (44%), Gaps = 50/435 (11%)
Query: 103 ITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGP 162
+ AY K +F+ A+KVL M ++G + V++ L+ R G + A + M+ G
Sbjct: 229 LEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGAVEEAFGFKKDMEDYGL 288
Query: 163 RPSALTYQIILKLFVEANKFKEAEEVFMTLLDE-EKSPLKPDQKMFHMMIYMYKKAGGYE 221
P TY ++ ++ + EA+ LLDE + LKP+ ++ +I + + G +
Sbjct: 289 VPDGFTYGALINGLCKSRRSNEAK----ALLDEMSCAELKPNVVVYANLIDGFMREGNAD 344
Query: 222 KARKLFALMAERGVQQSTVTYNSL---------------------------------MSF 248
+A K+ M GVQ + +TY++L +
Sbjct: 345 EAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYNLII 404
Query: 249 ETNYKEVSK-----IYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVR 303
E +++ SK + +M+ AG+ P+V +Y+++I+ ++ E+A + EEM G++
Sbjct: 405 EGHFRHHSKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLK 464
Query: 304 PTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKF 363
P Y L+ + G V A +F M + PD+ Y +++ +E + K+
Sbjct: 465 PNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKY 524
Query: 364 FRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGK 423
F ++++ G +PN TY LI GY K +LE ++ +M G+KPN I+ ++++Y K
Sbjct: 525 FAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFK 584
Query: 424 NKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPG--- 480
+ D + +K M G D + IL+ ++ A +L + P
Sbjct: 585 SDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSGIEKNGSVPDVHV 644
Query: 481 ----INGLSISVDEE 491
I+GL + D E
Sbjct: 645 YSSLISGLCKTADRE 659
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 87/387 (22%), Positives = 168/387 (43%), Gaps = 7/387 (1%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + LI+ Y ++G+ + A ++ M K P + + +L+ + GR + + F
Sbjct: 466 NAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYF 525
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
+MQ G P+ TY ++ +++ + AE++ +LD + LKP+ ++ ++ Y
Sbjct: 526 AQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLD---TGLKPNDVIYIDLLESY 582
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSL---MSFETNYKEVSKIYDQMQRAGLQPDV 271
K+ EK F M ++GV Y L +S N + ++ +++ G PDV
Sbjct: 583 FKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSGIEKNGSVPDV 642
Query: 272 VSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKC 331
Y+ LI+ K E+A + +EM GV P YN L+D SG + AR VF
Sbjct: 643 HVYSSLISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNS 702
Query: 332 MRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNN 391
+ P+ +YT+++ D+ A + + G P+ Y L G + +
Sbjct: 703 ILAKGLVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLATGITPDAFVYSVLTTGCSSAGD 762
Query: 392 LEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNI 451
LE+ M + ++M + G + + F ++D + K + + G P+
Sbjct: 763 LEQAMFLIEEMFLRG-HASISSFNNLVDGFCKRGKMQETLKLLHVIMGRGLVPNALTIEN 821
Query: 452 LLSLAKTADERNEANELLGNFNHPNNE 478
++S A + +E + + +E
Sbjct: 822 IISGLSEAGKLSEVHTIFVELQQKTSE 848
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 89/384 (23%), Positives = 179/384 (46%), Gaps = 8/384 (2%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
LI K N+A+ +L M+ P+VV + L++ + R G A + + M ++G
Sbjct: 298 LINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANLIDGFMREGNADEAFKMIKEMVAAG 357
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
+P+ +TY +++ + + A + ++ + +PD ++++I + + +
Sbjct: 358 VQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSH---RPDTITYNLIIEGHFRHHSKK 414
Query: 222 KARKLFALMAERGVQQSTVTYNSLMSFETNYKE---VSKIYDQMQRAGLQPDVVSYALLI 278
A +L + M G+ + TY+ ++ E S + ++M GL+P+ YA LI
Sbjct: 415 DAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLI 474
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCS 338
+ Y + A +F++M V P YN L+ + G V+++ F M+
Sbjct: 475 SGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLL 534
Query: 339 PDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEI 398
P+ +Y+ ++ Y+ D+E AE+ +R+ G PN + Y L++ Y K +++EK+
Sbjct: 535 PNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSST 594
Query: 399 YDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLS-LAK 457
+ M G+ + I+ ++ + + ++A +E G PD + L+S L K
Sbjct: 595 FKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSGIEKNGSVPDVHVYSSLISGLCK 654
Query: 458 TADERNEANELLGNFNHPNNEPGI 481
TAD R +A +L + +P I
Sbjct: 655 TAD-REKAFGILDEMSKKGVDPNI 677
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 86/403 (21%), Positives = 151/403 (37%), Gaps = 60/403 (14%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
NE + LI Y K GD AE+++ M G P+ V + L+E+Y + + + F
Sbjct: 536 NEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTF 595
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
+ M G Y I++ + E F L EK+ PD ++ +I
Sbjct: 596 KSMLDQGVMLDNRIYGILIHNLSSSGNM---EAAFRVLSGIEKNGSVPDVHVYSSLISGL 652
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVS---KIYDQMQRAGLQPDV 271
K EKA + M+++GV + V YN+L+ ++S +++ + GL P+
Sbjct: 653 CKTADREKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSILAKGLVPNC 712
Query: 272 VSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKC 331
V+Y LI+ K A ++ EML G+ P Y++L + +G ++QA + +
Sbjct: 713 VTYTSLIDGSCKVGDISNAFYLYNEMLATGITPDAFVYSVLTTGCSSAGDLEQAMFLIEE 772
Query: 332 MRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKG------ 385
M R I S+ ++ + M+ K + G VPN +T +I G
Sbjct: 773 MFL-RGHASISSFNNLVDGFCKRGKMQETLKLLHVIMGRGLVPNALTIENIISGLSEAGK 831
Query: 386 -----------------------------------------------YAKVNNLEKMMEI 398
+ K NL+K + +
Sbjct: 832 LSEVHTIFVELQQKTSESAARHFSSLFMDMINQGKIPLDVVDDMIRDHCKEGNLDKALML 891
Query: 399 YDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCG 441
D + + + I+D + A+ KEM+ G
Sbjct: 892 RDVIVAKSAPMGCSSYLAIVDNLCRKGKLSEALNLLKEMDKRG 934
>gi|449487793|ref|XP_004157803.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74850,
chloroplastic-like [Cucumis sativus]
Length = 864
Score = 148 bits (374), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 95/371 (25%), Positives = 173/371 (46%), Gaps = 9/371 (2%)
Query: 76 WNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHT 135
W + ++++ Q W NE + ++I+ G++G K ++ M +G SV S+T
Sbjct: 128 WQRSLRLFKYMQRQIWCKPNEHIYTIIISLLGREGLLEKCSEIFDEMASQGVIRSVFSYT 187
Query: 136 ALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDE 195
AL+ AYGR G+Y+ + + RM+ P+ LTY ++ + + E + +
Sbjct: 188 ALINAYGRNGQYETSLELLERMKRERVSPNILTYNTVINACARGDL--DWEGLLGLFAEM 245
Query: 196 EKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFET----- 250
++PD ++ ++ G ++A +F M E G+ TY+ ++ ET
Sbjct: 246 RHEGVQPDLVTYNTLLSACAARGLGDEAEMVFKTMIEGGIVPEITTYSYIV--ETFGKLG 303
Query: 251 NYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYN 310
++V+ + +M+ G PD+ SY +LI A+ K +EA+ VF++M AG P Y+
Sbjct: 304 KLEKVAMLLKEMESEGYLPDISSYNVLIEAHAKLGSIKEAMDVFKQMQAAGCVPNASTYS 363
Query: 311 ILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQD 370
ILL+ + G D R +F M+ PD +Y ++ + + F L +
Sbjct: 364 ILLNLYGKHGRYDDVRELFLQMKESSAEPDATTYNILIRVFGEGGYFKEVVTLFHDLVDE 423
Query: 371 GFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSA 430
PN+ TY L+ K E +I M GI P+ ++ +++AYG+ +D A
Sbjct: 424 NIDPNMETYEGLVFACGKGGLHEDAKKILFHMNGKGIVPSSKAYSGLIEAYGQAALYDEA 483
Query: 431 VVWYKEMESCG 441
+V + M G
Sbjct: 484 LVAFNTMNEVG 494
Score = 141 bits (356), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 88/353 (24%), Positives = 176/353 (49%), Gaps = 16/353 (4%)
Query: 145 GRYK-NAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSP---- 199
G+Y + E + ++ S PR S I K + N F + F D ++S
Sbjct: 77 GKYSYDVETLINKLSSLPPRGSIARCLDIFKNRLSLNDFSLVFKEFAARGDWQRSLRLFK 136
Query: 200 -------LKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLM-SFETN 251
KP++ ++ ++I + + G EK ++F MA +GV +S +Y +L+ ++ N
Sbjct: 137 YMQRQIWCKPNEHIYTIIISLLGREGLLEKCSEIFDEMASQGVIRSVFSYTALINAYGRN 196
Query: 252 --YKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEAL-AVFEEMLDAGVRPTHKA 308
Y+ ++ ++M+R + P++++Y +INA + + E L +F EM GV+P
Sbjct: 197 GQYETSLELLERMKRERVSPNILTYNTVINACARGDLDWEGLLGLFAEMRHEGVQPDLVT 256
Query: 309 YNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLK 368
YN LL A A G+ D+A VFK M P+I +Y+ ++ + +E + ++
Sbjct: 257 YNTLLSACAARGLGDEAEMVFKTMIEGGIVPEITTYSYIVETFGKLGKLEKVAMLLKEME 316
Query: 369 QDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFD 428
+G++P++ +Y LI+ +AK+ ++++ M+++ +M+ G PN + ++ +++ YGK+ +D
Sbjct: 317 SEGYLPDISSYNVLIEAHAKLGSIKEAMDVFKQMQAAGCVPNASTYSILLNLYGKHGRYD 376
Query: 429 SAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGI 481
+ +M+ PD NIL+ + E L + N +P +
Sbjct: 377 DVRELFLQMKESSAEPDATTYNILIRVFGEGGYFKEVVTLFHDLVDENIDPNM 429
Score = 128 bits (321), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 82/371 (22%), Positives = 176/371 (47%), Gaps = 6/371 (1%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
L++A +G ++AE V M + G P + +++ ++E +G+ G+ + + + M+S G
Sbjct: 260 LLSACAARGLGDEAEMVFKTMIEGGIVPEITTYSYIVETFGKLGKLEKVAMLLKEMESEG 319
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
P +Y ++++ + KEA +VF + + + P+ + +++ +Y K G Y+
Sbjct: 320 YLPDISSYNVLIEAHAKLGSIKEAMDVFKQM---QAAGCVPNASTYSILLNLYGKHGRYD 376
Query: 222 KARKLFALMAERGVQQSTVTYNSLMSF--ETNY-KEVSKIYDQMQRAGLQPDVVSYALLI 278
R+LF M E + TYN L+ E Y KEV ++ + + P++ +Y L+
Sbjct: 377 DVRELFLQMKESSAEPDATTYNILIRVFGEGGYFKEVVTLFHDLVDENIDPNMETYEGLV 436
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCS 338
A GK E+A + M G+ P+ KAY+ L++A+ + + D+A F M
Sbjct: 437 FACGKGGLHEDAKKILFHMNGKGIVPSSKAYSGLIEAYGQAALYDEALVAFNTMNEVGSK 496
Query: 339 PDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEI 398
I +Y +++ + + E R+++ G N ++ +I+GY + E+ ++
Sbjct: 497 STIDTYNSLIHTFARGGLYKEFEAILSRMREYGISRNAKSFSGIIEGYRQSGQYEEAIKA 556
Query: 399 YDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKT 458
+ +M + ++ ++ Y D + + E+++ G P ++L++
Sbjct: 557 FVEMEKMRCELDEQTLEGVLGVYCFAGLVDESKEQFIEIKASGILPSVLCYCMMLAVYAK 616
Query: 459 ADERNEANELL 469
++A+ELL
Sbjct: 617 NGRWDDASELL 627
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 86/349 (24%), Positives = 164/349 (46%), Gaps = 6/349 (1%)
Query: 122 MNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANK 181
M +G P +V++ L+ A G AE +F+ M G P TY I++ F K
Sbjct: 245 MRHEGVQPDLVTYNTLLSACAARGLGDEAEMVFKTMIEGGIVPEITTYSYIVETF---GK 301
Query: 182 FKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVT 241
+ E+V M L + E PD ++++I + K G ++A +F M G + T
Sbjct: 302 LGKLEKVAMLLKEMESEGYLPDISSYNVLIEAHAKLGSIKEAMDVFKQMQAAGCVPNAST 361
Query: 242 YNSLMSF---ETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEML 298
Y+ L++ Y +V +++ QM+ + +PD +Y +LI +G+ +E + +F +++
Sbjct: 362 YSILLNLYGKHGRYDDVRELFLQMKESSAEPDATTYNILIRVFGEGGYFKEVVTLFHDLV 421
Query: 299 DAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDME 358
D + P + Y L+ A G+ + A+ + M P +Y+ ++ AY A+ +
Sbjct: 422 DENIDPNMETYEGLVFACGKGGLHEDAKKILFHMNGKGIVPSSKAYSGLIEAYGQAALYD 481
Query: 359 GAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIM 418
A F + + G + TY +LI +A+ ++ I +MR GI N F+ I+
Sbjct: 482 EALVAFNTMNEVGSKSTIDTYNSLIHTFARGGLYKEFEAILSRMREYGISRNAKSFSGII 541
Query: 419 DAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANE 467
+ Y ++ ++ A+ + EME D++ +L + A +E+ E
Sbjct: 542 EGYRQSGQYEEAIKAFVEMEKMRCELDEQTLEGVLGVYCFAGLVDESKE 590
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 79/387 (20%), Positives = 170/387 (43%), Gaps = 43/387 (11%)
Query: 98 DFLMLITAYGKQGDFNKAEKVLSFMNKKGYA-PSVVSHTALMEAYGRGGRYKNAEAIFRR 156
DF ++ + +GD+ ++ ++ +M ++ + P+ +T ++ GR G + IF
Sbjct: 114 DFSLVFKEFAARGDWQRSLRLFKYMQRQIWCKPNEHIYTIIISLLGREGLLEKCSEIFDE 173
Query: 157 MQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKK 216
M S G S +Y +I Y +
Sbjct: 174 MASQGVIRSVFSYT--------------------------------------ALINAYGR 195
Query: 217 AGGYEKARKLFALMAERGVQQSTVTYNSLMSF----ETNYKEVSKIYDQMQRAGLQPDVV 272
G YE + +L M V + +TYN++++ + +++ + ++ +M+ G+QPD+V
Sbjct: 196 NGQYETSLELLERMKRERVSPNILTYNTVINACARGDLDWEGLLGLFAEMRHEGVQPDLV 255
Query: 273 SYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCM 332
+Y L++A +EA VF+ M++ G+ P Y+ +++ F G +++ + K M
Sbjct: 256 TYNTLLSACAARGLGDEAEMVFKTMIEGGIVPEITTYSYIVETFGKLGKLEKVAMLLKEM 315
Query: 333 RRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNL 392
+ PDI SY ++ A+ ++ A F++++ G VPN TY L+ Y K
Sbjct: 316 ESEGYLPDISSYNVLIEAHAKLGSIKEAMDVFKQMQAAGCVPNASTYSILLNLYGKHGRY 375
Query: 393 EKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNIL 452
+ + E++ +M+ + +P+ T + ++ +G+ F V + ++ P+ + L
Sbjct: 376 DDVRELFLQMKESSAEPDATTYNILIRVFGEGGYFKEVVTLFHDLVDENIDPNMETYEGL 435
Query: 453 LSLAKTADERNEANELLGNFNHPNNEP 479
+ +A ++L + N P
Sbjct: 436 VFACGKGGLHEDAKKILFHMNGKGIVP 462
>gi|218199706|gb|EEC82133.1| hypothetical protein OsI_26175 [Oryza sativa Indica Group]
Length = 799
Score = 148 bits (374), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 87/342 (25%), Positives = 168/342 (49%), Gaps = 6/342 (1%)
Query: 99 FLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQ 158
F +++ + ++GD A M K+G A V++TAL+ R G K AE + + M+
Sbjct: 358 FTTVMSGFCRKGDLAAARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEAERVLQEME 417
Query: 159 SSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAG 218
G A+TY +++ + + K EA V ++ + + P+ + + K G
Sbjct: 418 DKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKR---VTPNVVTYTALSDGLCKQG 474
Query: 219 GYEKARKLFALMAERGVQQSTVTYNSL---MSFETNYKEVSKIYDQMQRAGLQPDVVSYA 275
A +L M +G++ + TYNSL + N ++ + M AGL+PDV +Y
Sbjct: 475 DVCAANELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYT 534
Query: 276 LLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRD 335
+I A +++ + A ++ +EMLD G++PT YN+L++ F +SG V+ + + + M
Sbjct: 535 TIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEK 594
Query: 336 RCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKM 395
P+ +Y +++ Y +M+ + ++ + VPN TY LIKG+ K N+++
Sbjct: 595 NIHPNTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQEVVPNENTYNILIKGHCKARNMKEA 654
Query: 396 MEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEM 437
+ + +M G + + + ++ K K F A +++M
Sbjct: 655 LYFHSEMIEKGFRLTASSYNALIRLLNKKKKFTEARRLFEKM 696
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 91/331 (27%), Positives = 147/331 (44%), Gaps = 44/331 (13%)
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
P + +Y I+LK A + K+A ++F DE SP PD + +M++ Y E
Sbjct: 249 PEKNTCSYNILLKALCTAGRIKDAHQLF----DEMASP--PDVVTYGIMVHGYCTLSELE 302
Query: 222 KARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSKI----------------------- 258
A KL + MA RG++ + V Y S+++ + +VS
Sbjct: 303 TAIKLLSEMAARGLELNPVAYTSVIALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVM 362
Query: 259 ---------------YDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVR 303
+D+MQ+ GL D V+Y LIN +A +EA V +EM D G+
Sbjct: 363 SGFCRKGDLAAARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLD 422
Query: 304 PTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKF 363
Y +L+D + G + +A V M + R +P++ +YT + D+ A +
Sbjct: 423 VDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANEL 482
Query: 364 FRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGK 423
+ G N+ TY +LI G K NLE+ M M G+KP+ +TTI+ A +
Sbjct: 483 LHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQ 542
Query: 424 NKDFDSAVVWYKEMESCGFPPDQKAKNILLS 454
+K+ D A +EM G P N+L++
Sbjct: 543 SKELDRAHSLLQEMLDKGIKPTIVTYNVLMN 573
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 102/440 (23%), Positives = 189/440 (42%), Gaps = 8/440 (1%)
Query: 93 DFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEA 152
+ N + + +I +G + A +V+ M G T +M + R G A
Sbjct: 317 ELNPVAYTSVIALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGDLAAARN 376
Query: 153 IFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIY 212
F MQ G +TY ++ A + KEAE V L + E L D + ++I
Sbjct: 377 WFDEMQKRGLAADGVTYTALINGLCRAGELKEAERV---LQEMEDKGLDVDAVTYTVLID 433
Query: 213 MYKKAGGYEKARKLFALMAERGVQQSTVTYNSL---MSFETNYKEVSKIYDQMQRAGLQP 269
Y K G +A + M ++ V + VTY +L + + + +++ +M GL+
Sbjct: 434 GYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLEL 493
Query: 270 DVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVF 329
++ +Y LIN KA E+A+ +M +AG++P Y ++ A S +D+A ++
Sbjct: 494 NIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSLL 553
Query: 330 KCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKV 389
+ M P I +Y +++ + + +EG ++ + + PN TY +L+K Y
Sbjct: 554 QEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIE 613
Query: 390 NNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAK 449
N++ EIY M + PN+ + ++ + K ++ A+ ++ EM GF +
Sbjct: 614 KNMKSTTEIYKGMLSQEVVPNENTYNILIKGHCKARNMKEALYFHSEMIEKGFRLTASSY 673
Query: 450 NILLSLAKTADERNEANELLGNF--NHPNNEPGINGLSISVDEEDDDDDDDEDDDDNIYH 507
N L+ L + EA L + EP + I + +D+ + D +
Sbjct: 674 NALIRLLNKKKKFTEARRLFEKMRKDRLTAEPDVYNFYIDLSFNEDNLESTLALCDELVE 733
Query: 508 DGDGDGDGDDNEDDAEETIA 527
D ++D AEE I+
Sbjct: 734 VTLVKSIADTDDDFAEEHIS 753
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 61/253 (24%), Positives = 110/253 (43%), Gaps = 12/253 (4%)
Query: 221 EKARKLFALMAERGVQQSTVTYNSLM---SFETNYKEVSKIYDQMQRAGLQPDVVSYALL 277
++A +LF + E+ +T +YN L+ K+ +++D+M PDVV+Y ++
Sbjct: 239 DEAVQLFQELPEK----NTCSYNILLKALCTAGRIKDAHQLFDEMASP---PDVVTYGIM 291
Query: 278 INAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRC 337
++ Y E A+ + EM G+ AY ++ G V A V + M
Sbjct: 292 VHGYCTLSELETAIKLLSEMAARGLELNPVAYTSVIALLCDEGQVSDAVRVVEDMVMHGV 351
Query: 338 SPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMME 397
D +TT++S + D+ A +F +++ G + +TY LI G + L++
Sbjct: 352 VLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEAER 411
Query: 398 IYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILL-SLA 456
+ +M G+ + +T ++D Y K A + + +M P+ L L
Sbjct: 412 VLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLC 471
Query: 457 KTADERNEANELL 469
K D ANELL
Sbjct: 472 KQGDV-CAANELL 483
>gi|255661196|gb|ACU25767.1| pentatricopeptide repeat-containing protein [Pitraea cuneato-ovata]
Length = 426
Score = 148 bits (374), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 102/377 (27%), Positives = 180/377 (47%), Gaps = 39/377 (10%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
LI K D++KA + S + + G P +V + +++ +G+ ++ A ++ M++ G
Sbjct: 50 LIELSRKLCDYSKAISIFSRLKRSGITPDLVVYNSMINVFGKAKLFREARSLICEMRTXG 109
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
P ++Y +L ++VE KF EA VF + E K L D ++MI +Y + G +
Sbjct: 110 VMPDTVSYTTLLTMYVENKKFIEALSVFAEM-REIKCLL--DLTTCNIMIDVYGQLGMAK 166
Query: 222 KARKLFALMAERGVQQSTVTYNSLMSFETN---YKEVSKIYDQMQRAGLQPDVVSYALLI 278
+A KLF M + GV+ + V+YN+L+ ++ + E ++ MQR ++ +VV+Y ++
Sbjct: 167 EADKLFWSMRKLGVEPNVVSYNTLLRVYSDAELFGEAXHLFRLMQRKDIEQNVVTYNSMM 226
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCS 338
YGK E+A + +EM G+ P Y+ ++ + G +D+A +F+ +R
Sbjct: 227 MIYGKTLEHEKANNLIQEMQSRGIEPNAITYSTIISIWGKVGKLDRAAMLFEKLRSSGIE 286
Query: 339 PDICSYTTMLSAYVNAS-------------------------------DMEGAEKFFRRL 367
D Y TM+ AY A ME A FR+
Sbjct: 287 IDQVLYQTMIVAYERAGLVSHAKRLLHELKTPDNIPRDTAIQILAGSGRMEEATWVFRQA 346
Query: 368 KQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDF 427
G V ++ + +I ++K ++E++DKMR G P+ + +++AYGK DF
Sbjct: 347 IDAGEVKDITVFEQMIDLFSKYRKYSNVVEVFDKMRGLGYFPDSNVIALVLNAYGKLHDF 406
Query: 428 DSAVVWYKEM--ESCGF 442
+ A Y EM E C F
Sbjct: 407 EKANDVYLEMQDEGCVF 423
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 83/325 (25%), Positives = 143/325 (44%), Gaps = 38/325 (11%)
Query: 200 LKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFE---TNYKEVS 256
L PD+ + +I + K G ++ A M V+ Y++L+ +Y +
Sbjct: 5 LSPDKYTYSTLITHFGKEGLFDDALSWLQKMEHDRVRGDLXLYSNLIELSRKLCDYSKAI 64
Query: 257 KIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAF 316
I+ +++R+G+ PD+V Y +IN +GKA+ EA ++ EM GV P +Y LL +
Sbjct: 65 SIFSRLKRSGITPDLVVYNSMINVFGKAKLFREARSLICEMRTXGVMPDTVSYTTLLTMY 124
Query: 317 AISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNV 376
+ +A +VF MR +C D+ + M+ Y + A+K F +++ G PNV
Sbjct: 125 VENKKFIEALSVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWSMRKLGVEPNV 184
Query: 377 ITYGTLIKGYA----------------------KVNNLEKMMEIYDK------------- 401
++Y TL++ Y+ V MM IY K
Sbjct: 185 VSYNTLLRVYSDAELFGEAXHLFRLMQRKDIEQNVVTYNSMMMIYGKTLEHEKANNLIQE 244
Query: 402 MRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADE 461
M+ GI+PN ++TI+ +GK D A + ++++ S G DQ ++ + A
Sbjct: 245 MQSRGIEPNAITYSTIISIWGKVGKLDRAAMLFEKLRSSGIEIDQVLYQTMIVAYERAGL 304
Query: 462 RNEANELLGNFNHPNNEPGINGLSI 486
+ A LL P+N P + I
Sbjct: 305 VSHAKRLLHELKTPDNIPRDTAIQI 329
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 57/244 (23%), Positives = 115/244 (47%), Gaps = 6/244 (2%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + + L+ Y F +A + M +K +VV++ ++M YG+ ++ A +
Sbjct: 183 NVVSYNTLLRVYSDAELFGEAXHLFRLMQRKDIEQNVVTYNSMMMIYGKTLEHEKANNLI 242
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
+ MQS G P+A+TY I+ ++ + K A +F L S ++ DQ ++ MI Y
Sbjct: 243 QEMQSRGIEPNAITYSTIISIWGKVGKLDRAAMLFEKL---RSSGIEIDQVLYQTMIVAY 299
Query: 215 KKAGGYEKARKLFA-LMAERGVQQSTVTYNSLMSFETNYKEVSKIYDQMQRAGLQPDVVS 273
++AG A++L L + + T +++ +E + ++ Q AG D+
Sbjct: 300 ERAGLVSHAKRLLHELKTPDNIPRDTAI--QILAGSGRMEEATWVFRQAIDAGEVKDITV 357
Query: 274 YALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMR 333
+ +I+ + K R+ + VF++M G P ++L+A+ ++A V+ M+
Sbjct: 358 FEQMIDLFSKYRKYSNVVEVFDKMRGLGYFPDSNVIALVLNAYGKLHDFEKANDVYLEMQ 417
Query: 334 RDRC 337
+ C
Sbjct: 418 DEGC 421
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 79/181 (43%)
Query: 301 GVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGA 360
+ P Y+ L+ F G+ D A + + M DR D+ Y+ ++ D A
Sbjct: 4 ALSPDKYTYSTLITHFGKEGLFDDALSWLQKMEHDRVRGDLXLYSNLIELSRKLCDYSKA 63
Query: 361 EKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDA 420
F RLK+ G P+++ Y ++I + K + + +MR G+ P+ +TT++
Sbjct: 64 ISIFSRLKRSGITPDLVVYNSMINVFGKAKLFREARSLICEMRTXGVMPDTVSYTTLLTM 123
Query: 421 YGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPG 480
Y +NK F A+ + EM D NI++ + EA++L + EP
Sbjct: 124 YVENKKFIEALSVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWSMRKLGVEPN 183
Query: 481 I 481
+
Sbjct: 184 V 184
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 65/273 (23%), Positives = 116/273 (42%), Gaps = 4/273 (1%)
Query: 101 MLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSS 160
++I YG+ G +A+K+ M K G P+VVS+ L+ Y + A +FR MQ
Sbjct: 154 IMIDVYGQLGMAKEADKLFWSMRKLGVEPNVVSYNTLLRVYSDAELFGEAXHLFRLMQRK 213
Query: 161 GPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGY 220
+ +TY ++ ++ K E E+ + + + ++P+ + +I ++ K G
Sbjct: 214 DIEQNVVTYNSMMMIY---GKTLEHEKANNLIQEMQSRGIEPNAITYSTIISIWGKVGKL 270
Query: 221 EKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSKIYDQMQRAGLQPDVVSYALLINA 280
++A LF + G++ V Y +++ VS + PD + I
Sbjct: 271 DRAAMLFEKLRSSGIEIDQVLYQTMIVAYERAGLVSHAKRLLHELK-TPDNIPRDTAIQI 329
Query: 281 YGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPD 340
+ R EEA VF + +DAG + ++D F+ VF MR PD
Sbjct: 330 LAGSGRMEEATWVFRQAIDAGEVKDITVFEQMIDLFSKYRKYSNVVEVFDKMRGLGYFPD 389
Query: 341 ICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFV 373
+L+AY D E A + ++ +G V
Sbjct: 390 SNVIALVLNAYGKLHDFEKANDVYLEMQDEGCV 422
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/123 (23%), Positives = 64/123 (52%)
Query: 333 RRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNL 392
R SPD +Y+T+++ + + A + ++++ D ++ Y LI+ K+ +
Sbjct: 1 RERALSPDKYTYSTLITHFGKEGLFDDALSWLQKMEHDRVRGDLXLYSNLIELSRKLCDY 60
Query: 393 EKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNIL 452
K + I+ +++ +GI P+ ++ ++++ +GK K F A EM + G PD + L
Sbjct: 61 SKAISIFSRLKRSGITPDLVVYNSMINVFGKAKLFREARSLICEMRTXGVMPDTVSYTTL 120
Query: 453 LSL 455
L++
Sbjct: 121 LTM 123
>gi|326487476|dbj|BAJ89722.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 805
Score = 148 bits (374), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 97/406 (23%), Positives = 183/406 (45%), Gaps = 41/406 (10%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
+I A G+ G ++A + +G+AP VV++ AL++ +G+ G Y A + R M+ +G
Sbjct: 260 VIAAAGRDGLVDEAVAFFEDLKARGHAPCVVTYNALLQVFGKAGNYTEALRVLREMEDAG 319
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
+P A+TY + + A ++EA + T++ + L P+ ++ ++ Y AG +
Sbjct: 320 CKPDAVTYNELAGSYARAGFYQEAAKCIDTMIGKG---LLPNTFTYNTIMTAYGNAGKVD 376
Query: 222 KARKLFALMAERGVQQSTVTYNSLMSF---ETNYKEVSKIYDQMQRAGLQPDVVS----- 273
+A LF M + G T TYN ++ ++ + + ++ +M R+G P+ V+
Sbjct: 377 EALALFDRMKKNGFIPYTNTYNLVLGMLGKKSRFAAMLEMLGEMSRSGCTPNRVTWNTLL 436
Query: 274 ------------------------------YALLINAYGKARREEEALAVFEEMLDAGVR 303
Y LI AYG+ A +++EM AG
Sbjct: 437 AVCGKRGMESYVTRVLEGMKSCKVELCRDTYNTLICAYGRCGSRANAFKMYDEMTAAGFA 496
Query: 304 PTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKF 363
P YN LL+ + G AR++ M+ + P+ SY+ +L + + G E
Sbjct: 497 PCLTTYNALLNVLSRQGDWTAARSIVSKMKSEGFKPNDMSYSLLLQCHAKGGNAAGIEAI 556
Query: 364 FRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGK 423
+ + Q P+ + TL+ K LE + + +++ G KP+ I +++ Y K
Sbjct: 557 EKEVYQGNIFPSWVILRTLVIANFKCRRLEGIERAFQEVKARGHKPDLVILNSMLSIYAK 616
Query: 424 NKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELL 469
N + A+ ++ +E G PD N L+ + ++E EA ++L
Sbjct: 617 NGLYSKAMEMFESIEQLGLSPDLITYNSLMDMYAKSNEPWEAEKIL 662
Score = 138 bits (347), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 103/433 (23%), Positives = 194/433 (44%), Gaps = 16/433 (3%)
Query: 64 LGTLVRLKQLK-KWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFM 122
L +L++ +L W +L W R + D F M++ A G++G + + V + +
Sbjct: 115 LPSLLKALELSGHWEWALALLRWARAEGAAD-GPAPFEMVVRALGREG---RHDAVCALL 170
Query: 123 NKKGYAPS----VVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVE 178
++ P V ++T ++ A R GRY+ A +F ++ G P+ +TY ++L ++
Sbjct: 171 DEMPLPPGARLDVRAYTTVLHALSREGRYERALRLFDELRREGVAPTRVTYNVVLDVY-- 228
Query: 179 ANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQS 238
+ V L D + ++PD +I + G ++A F + RG
Sbjct: 229 GRMGRSWPRVVALLADMRAAGVEPDGFTASTVIAAAGRDGLVDEAVAFFEDLKARGHAPC 288
Query: 239 TVTYNSLMSF---ETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFE 295
VTYN+L+ NY E ++ +M+ AG +PD V+Y L +Y +A +EA +
Sbjct: 289 VVTYNALLQVFGKAGNYTEALRVLREMEDAGCKPDAVTYNELAGSYARAGFYQEAAKCID 348
Query: 296 EMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNAS 355
M+ G+ P YN ++ A+ +G VD+A +F M+++ P +Y +L S
Sbjct: 349 TMIGKGLLPNTFTYNTIMTAYGNAGKVDEALALFDRMKKNGFIPYTNTYNLVLGMLGKKS 408
Query: 356 DMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFT 415
+ + + G PN +T+ TL+ K + + + M+ ++ + +
Sbjct: 409 RFAAMLEMLGEMSRSGCTPNRVTWNTLLAVCGKRGMESYVTRVLEGMKSCKVELCRDTYN 468
Query: 416 TIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHP 475
T++ AYG+ +A Y EM + GF P N LL++ + A ++
Sbjct: 469 TLICAYGRCGSRANAFKMYDEMTAAGFAPCLTTYNALLNVLSRQGDWTAARSIVSKMKSE 528
Query: 476 NNEPGINGLSISV 488
+P N +S S+
Sbjct: 529 GFKP--NDMSYSL 539
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 90/349 (25%), Positives = 159/349 (45%), Gaps = 10/349 (2%)
Query: 98 DFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRM 157
D L+ A G + A +L + +G A ++ A GR GR+ A+ M
Sbjct: 114 DLPSLLKALELSGHWEWALALLRWARAEGAADGPAPFEMVVRALGREGRHDAVCALLDEM 173
Query: 158 Q-SSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKK 216
G R Y +L +++ A +F L + + P + +++++ +Y +
Sbjct: 174 PLPPGARLDVRAYTTVLHALSREGRYERALRLFDEL---RREGVAPTRVTYNVVLDVYGR 230
Query: 217 AG-GYEKARKLFALMAERGVQQSTVTYNSLMSFETN---YKEVSKIYDQMQRAGLQPDVV 272
G + + L A M GV+ T +++++ E ++ ++ G P VV
Sbjct: 231 MGRSWPRVVALLADMRAAGVEPDGFTASTVIAAAGRDGLVDEAVAFFEDLKARGHAPCVV 290
Query: 273 SYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCM 332
+Y L+ +GKA EAL V EM DAG +P YN L ++A +G +A M
Sbjct: 291 TYNALLQVFGKAGNYTEALRVLREMEDAGCKPDAVTYNELAGSYARAGFYQEAAKCIDTM 350
Query: 333 RRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNL 392
P+ +Y T+++AY NA ++ A F R+K++GF+P TY ++ K +
Sbjct: 351 IGKGLLPNTFTYNTIMTAYGNAGKVDEALALFDRMKKNGFIPYTNTYNLVLGMLGKKSRF 410
Query: 393 EKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKE-MESC 440
M+E+ +M +G PN+ + T++ GK + +S V E M+SC
Sbjct: 411 AAMLEMLGEMSRSGCTPNRVTWNTLLAVCGK-RGMESYVTRVLEGMKSC 458
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 79/276 (28%), Positives = 132/276 (47%), Gaps = 17/276 (6%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
L+ +QGD+ A ++S M +G+ P+ +S++ L++ + +GG EAI + +
Sbjct: 505 LLNVLSRQGDWTAARSIVSKMKSEGFKPNDMSYSLLLQCHAKGGNAAGIEAIEKEVYQGN 564
Query: 162 PRPSALTYQIILKLFVEAN-KFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGY 220
PS +IL+ V AN K + E + + + KPD + + M+ +Y K G Y
Sbjct: 565 IFPS----WVILRTLVIANFKCRRLEGIERAFQEVKARGHKPDLVILNSMLSIYAKNGLY 620
Query: 221 EKARKLFALMAERGVQQSTVTYNSLMSFETNYKE---VSKIYDQMQRAG---------LQ 268
KA ++F + + G+ +TYNSLM E KI ++++ + L+
Sbjct: 621 SKAMEMFESIEQLGLSPDLITYNSLMDMYAKSNEPWEAEKILNRLRSSQSQQQQQQQQLK 680
Query: 269 PDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTV 328
PDVVSY +IN + K +EA V EM+ GV P Y+ L+ +A M +AR V
Sbjct: 681 PDVVSYNTVINGFCKEGLIKEAQRVLSEMIADGVAPCVITYHTLVGGYASREMFAEAREV 740
Query: 329 FKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFF 364
M + + P +Y ++ +Y A E A F
Sbjct: 741 VGYMIQRKLKPMELTYRRVVDSYCRAKRYEDARDFL 776
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 97/443 (21%), Positives = 172/443 (38%), Gaps = 114/443 (25%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
L +Y + G + +A K + M KG P+ ++ +M AYG G+ A A+F RM+ +G
Sbjct: 330 LAGSYARAGFYQEAAKCIDTMIGKGLLPNTFTYNTIMTAYGNAGKVDEALALFDRMKKNG 389
Query: 162 PRPSALTYQIILKLFVEANKF------------------------------KEAEEVFMT 191
P TY ++L + + ++F K E ++T
Sbjct: 390 FIPYTNTYNLVLGMLGKKSRFAAMLEMLGEMSRSGCTPNRVTWNTLLAVCGKRGMESYVT 449
Query: 192 LLDEEKSPLKPD--QKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLM--- 246
+ E K + + ++ +I Y + G A K++ M G TYN+L+
Sbjct: 450 RVLEGMKSCKVELCRDTYNTLICAYGRCGSRANAFKMYDEMTAAGFAPCLTTYNALLNVL 509
Query: 247 SFETNYKEVSKIYDQMQRAGLQPDVVSYALLI-------NAYG----------------- 282
S + ++ I +M+ G +P+ +SY+LL+ NA G
Sbjct: 510 SRQGDWTAARSIVSKMKSEGFKPNDMSYSLLLQCHAKGGNAAGIEAIEKEVYQGNIFPSW 569
Query: 283 -----------KARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKC 331
K RR E F+E+ G +P N +L +A +G+ +A +F+
Sbjct: 570 VILRTLVIANFKCRRLEGIERAFQEVKARGHKPDLVILNSMLSIYAKNGLYSKAMEMFES 629
Query: 332 MRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQ---------------------- 369
+ + SPD+ +Y +++ Y +++ AEK RL+
Sbjct: 630 IEQLGLSPDLITYNSLMDMYAKSNEPWEAEKILNRLRSSQSQQQQQQQQLKPDVVSYNTV 689
Query: 370 ----------------------DGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGI 407
DG P VITY TL+ GYA + E+ M +
Sbjct: 690 INGFCKEGLIKEAQRVLSEMIADGVAPCVITYHTLVGGYASREMFAEAREVVGYMIQRKL 749
Query: 408 KPNQTIFTTIMDAYGKNKDFDSA 430
KP + + ++D+Y + K ++ A
Sbjct: 750 KPMELTYRRVVDSYCRAKRYEDA 772
>gi|186510147|ref|NP_188293.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75274280|sp|Q9LUR2.1|PP238_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At3g16710, mitochondrial; Flags: Precursor
gi|11994626|dbj|BAB02763.1| unnamed protein product [Arabidopsis thaliana]
gi|332642334|gb|AEE75855.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 507
Score = 148 bits (374), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 90/359 (25%), Positives = 174/359 (48%), Gaps = 9/359 (2%)
Query: 96 EMDFLMLITAYGKQGDFNKAEKVLSFMNK---KGYAPSVVSHTALMEAYGRGGRYKNAEA 152
E D + + +N+ E ++ ++ G+ P+VV++T L+ + +A
Sbjct: 150 EPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVE 209
Query: 153 IFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIY 212
+F +M ++G RP+ +TY ++ E ++ +A + L D K ++P+ F +I
Sbjct: 210 LFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWL---LRDMMKRRIEPNVITFTALID 266
Query: 213 MYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYK---EVSKIYDQMQRAGLQP 269
+ K G +A++L+ +M + V TY SL++ Y E +++ M+R G P
Sbjct: 267 AFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYP 326
Query: 270 DVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVF 329
+ V Y LI+ + K++R E+ + +F EM GV Y +L+ + + G D A+ VF
Sbjct: 327 NEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVF 386
Query: 330 KCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKV 389
M R PDI +Y +L +E A F +++ N++TY +I+G K+
Sbjct: 387 NQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKL 446
Query: 390 NNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKA 448
+E +++ + G+KPN +TT++ + + A +K+M+ GF P++
Sbjct: 447 GKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGLIHEADSLFKKMKEDGFLPNESV 505
Score = 144 bits (364), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 88/323 (27%), Positives = 158/323 (48%), Gaps = 6/323 (1%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + + LI K N A ++ + M G P+VV++ AL+ GR+ +A +
Sbjct: 187 NVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLL 246
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
R M P+ +T+ ++ FV+ K EA+E++ ++ + + PD + +I
Sbjct: 247 RDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMI---QMSVYPDVFTYGSLINGL 303
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVS---KIYDQMQRAGLQPDV 271
G ++AR++F LM G + V Y +L+ K V KI+ +M + G+ +
Sbjct: 304 CMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANT 363
Query: 272 VSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKC 331
++Y +LI Y R + A VF +M P + YN+LLD +G V++A +F+
Sbjct: 364 ITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEY 423
Query: 332 MRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNN 391
MR+ +I +YT ++ +E A F L G PNVITY T+I G+ +
Sbjct: 424 MRKREMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGL 483
Query: 392 LEKMMEIYDKMRVNGIKPNQTIF 414
+ + ++ KM+ +G PN++++
Sbjct: 484 IHEADSLFKKMKEDGFLPNESVY 506
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 83/345 (24%), Positives = 159/345 (46%), Gaps = 6/345 (1%)
Query: 112 FNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQI 171
FN A + + M PS++ T L+ + RY ++F +MQ G P T I
Sbjct: 64 FNDALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQMQILGIPPLLCTCNI 123
Query: 172 ILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMA 231
++ +++ A ++ K +PD F ++ Y E A LF +
Sbjct: 124 VMHCVCLSSQPCRASCFLGKMM---KLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQIL 180
Query: 232 ERGVQQSTVTYNSLMSFETNYKEVS---KIYDQMQRAGLQPDVVSYALLINAYGKARREE 288
G + + VTY +L+ + ++ ++++QM G +P+VV+Y L+ + R
Sbjct: 181 GMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWG 240
Query: 289 EALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTML 348
+A + +M+ + P + L+DAF G + +A+ ++ M + PD+ +Y +++
Sbjct: 241 DAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLI 300
Query: 349 SAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIK 408
+ ++ A + F ++++G PN + Y TLI G+ K +E M+I+ +M G+
Sbjct: 301 NGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVV 360
Query: 409 PNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILL 453
N +T ++ Y D A + +M S PPD + N+LL
Sbjct: 361 ANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLL 405
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 78/348 (22%), Positives = 161/348 (46%), Gaps = 8/348 (2%)
Query: 146 RYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDE-EKSPLKPDQ 204
++ +A +F RM S P PS + + +L + + N++ +V ++L ++ + + P
Sbjct: 63 QFNDALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRY----DVVISLFEQMQILGIPPLL 118
Query: 205 KMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVS---KIYDQ 261
+++++ + +A M + G + VT+ SL++ ++ + ++DQ
Sbjct: 119 CTCNIVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQ 178
Query: 262 MQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGM 321
+ G +P+VV+Y LI K R A+ +F +M G RP YN L+ G
Sbjct: 179 ILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGR 238
Query: 322 VDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGT 381
A + + M + R P++ ++T ++ A+V + A++ + + Q P+V TYG+
Sbjct: 239 WGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGS 298
Query: 382 LIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCG 441
LI G L++ +++ M NG PN+ I+TT++ + K+K + + + EM G
Sbjct: 299 LINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKG 358
Query: 442 FPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGINGLSISVD 489
+ +L+ + A E+ + P I ++ +D
Sbjct: 359 VVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLD 406
Score = 43.1 bits (100), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 21/89 (23%), Positives = 46/89 (51%), Gaps = 1/89 (1%)
Query: 82 VLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAY 141
+ E++R + D N + + ++I K G A + + KG P+V+++T ++ +
Sbjct: 420 IFEYMR-KREMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGF 478
Query: 142 GRGGRYKNAEAIFRRMQSSGPRPSALTYQ 170
R G A+++F++M+ G P+ Y+
Sbjct: 479 CRRGLIHEADSLFKKMKEDGFLPNESVYK 507
>gi|255661184|gb|ACU25761.1| pentatricopeptide repeat-containing protein [Lantana canescens]
Length = 426
Score = 148 bits (374), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 98/374 (26%), Positives = 182/374 (48%), Gaps = 37/374 (9%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
LI K D++KA + S + + G+ P +V++ A++ +G+ ++ A ++ M+++G
Sbjct: 50 LIELSRKLCDYSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLIGEMKAAG 109
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
P+ +Y +L ++VE KF EA VF + + E K L D ++MI +Y + G +
Sbjct: 110 VMPNTXSYSTLLTMYVENKKFLEALSVF-SEMREJKCLL--DLTTCNIMIDVYGQLGMAK 166
Query: 222 KARKLFALMAERGVQQSTVTYNSLMSFETN---YKEVSKIYDQMQRAGLQPDVVSYALLI 278
+A KLF M + G++ + V+YN+L+ + + E ++ MQR ++ +VV+Y ++
Sbjct: 167 EADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMM 226
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCS 338
YGK E+A + +EM G+ P Y+ ++ + G +D+A +F+ +R
Sbjct: 227 MIYGKTLEHEKANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGIE 286
Query: 339 PDICSYTTMLSAY-------------------------------VNASDMEGAEKFFRRL 367
D + TM+ AY A +E A FR+
Sbjct: 287 IDQILFQTMIVAYERAGLVAHAKRLLHELKRPDNIPRDTAIHILAGAGRIEEATYVFRQA 346
Query: 368 KQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDF 427
G V ++ + +I +K ++E++DKMR G P+ + +++AYGK ++F
Sbjct: 347 IDAGEVKDITVFERMIHLLSKYKKYSNVVEVFDKMRGLGYFPDSDVIAIVLNAYGKLQEF 406
Query: 428 DSAVVWYKEMESCG 441
D A Y EM+ G
Sbjct: 407 DKANDVYMEMQEVG 420
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 85/318 (26%), Positives = 146/318 (45%), Gaps = 38/318 (11%)
Query: 200 LKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFE---TNYKEVS 256
L PD+ + +I + K G ++ A M + V V Y++L+ +Y +
Sbjct: 5 LSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDYSKAI 64
Query: 257 KIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAF 316
I+ +++R+G PD+V+Y +IN +GKA+ EA ++ EM AGV P +Y+ LL +
Sbjct: 65 SIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLIGEMKAAGVMPNTXSYSTLLTMY 124
Query: 317 AISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNV 376
+ +A +VF MR +C D+ + M+ Y + A+K F +++ G PNV
Sbjct: 125 VENKKFLEALSVFSEMREJKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNV 184
Query: 377 ITYGTLIKGYA---------------KVNNLEK-------MMEIYDK------------- 401
++Y TL++ Y + N+E+ MM IY K
Sbjct: 185 VSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLIQE 244
Query: 402 MRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADE 461
M+ GI+PN ++TI+ +GK D A + ++++ S G DQ ++ + A
Sbjct: 245 MQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGIEIDQILFQTMIVAYERAGL 304
Query: 462 RNEANELLGNFNHPNNEP 479
A LL P+N P
Sbjct: 305 VAHAKRLLHELKRPDNIP 322
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/244 (24%), Positives = 115/244 (47%), Gaps = 6/244 (2%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + + L+ YG F +A + M +K +VV++ ++M YG+ ++ A +
Sbjct: 183 NVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLI 242
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
+ MQS G P+++TY I+ ++ + K A +F L S ++ DQ +F MI Y
Sbjct: 243 QEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKL---RSSGIEIDQILFQTMIVAY 299
Query: 215 KKAGGYEKARKLFA-LMAERGVQQSTVTYNSLMSFETNYKEVSKIYDQMQRAGLQPDVVS 273
++AG A++L L + + T + +++ +E + ++ Q AG D+
Sbjct: 300 ERAGLVAHAKRLLHELKRPDNIPRDTAIH--ILAGAGRIEEATYVFRQAIDAGEVKDITV 357
Query: 274 YALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMR 333
+ +I+ K ++ + VF++M G P I+L+A+ D+A V+ M+
Sbjct: 358 FERMIHLLSKYKKYSNVVEVFDKMRGLGYFPDSDVIAIVLNAYGKLQEFDKANDVYMEMQ 417
Query: 334 RDRC 337
C
Sbjct: 418 EVGC 421
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 45/181 (24%), Positives = 80/181 (44%)
Query: 301 GVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGA 360
G+ P Y+ L+ F G+ D A + + M +DR D+ Y+ ++ D A
Sbjct: 4 GLSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDYSKA 63
Query: 361 EKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDA 420
F RLK+ GF P+++ Y +I + K + + +M+ G+ PN ++T++
Sbjct: 64 ISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLIGEMKAAGVMPNTXSYSTLLTM 123
Query: 421 YGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPG 480
Y +NK F A+ + EM D NI++ + EA++L EP
Sbjct: 124 YVENKKFLEALSVFSEMREJKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPN 183
Query: 481 I 481
+
Sbjct: 184 V 184
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/123 (22%), Positives = 66/123 (53%)
Query: 333 RRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNL 392
R+ SPD +Y+T+++ + + A + ++++QD +++ Y LI+ K+ +
Sbjct: 1 RQRGLSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDY 60
Query: 393 EKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNIL 452
K + I+ +++ +G P+ + +++ +GK K F A EM++ G P+ + + L
Sbjct: 61 SKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLIGEMKAAGVMPNTXSYSTL 120
Query: 453 LSL 455
L++
Sbjct: 121 LTM 123
Score = 46.6 bits (109), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 27/118 (22%), Positives = 51/118 (43%)
Query: 368 KQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDF 427
+Q G P+ TY TLI + K + + KM + + + +++ +++ K D+
Sbjct: 1 RQRGLSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDY 60
Query: 428 DSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGINGLS 485
A+ + ++ GF PD A N ++++ A EA L+G P S
Sbjct: 61 SKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLIGEMKAAGVMPNTXSYS 118
>gi|449485308|ref|XP_004157129.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g31850, chloroplastic-like [Cucumis sativus]
Length = 1113
Score = 148 bits (373), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 94/397 (23%), Positives = 184/397 (46%), Gaps = 41/397 (10%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N F + I G+ G ++A ++ M+ +G P +V++T L++A G+ +NA+ +F
Sbjct: 261 NVYTFTICIRVLGRAGKIDEAYEIFRRMDDEGCGPDLVTYTVLIDALCNAGQLENAKELF 320
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
+M+++G +P + Y +L F + +E + + E PD F +++ +
Sbjct: 321 VKMKANGHKPDQVIYITLLDKFNDFGDLDTFKEFWSQM---EADGYMPDVVTFTILVDVL 377
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSLMS---FETNYKEVSKIYDQMQRAGLQPDV 271
KA +++A F +M ++G+ + TYN+L+ ++ K+ D M+ G+QP
Sbjct: 378 CKARDFDEAFATFDVMRKQGILPNLHTYNTLICGLLRAGRIEDALKLLDTMESVGVQPTA 437
Query: 272 VSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKA----------------------- 308
+Y I+ +GK+ +A+ FE+M G+ P A
Sbjct: 438 YTYITFIDYFGKSGETGKAVETFEKMKAKGIVPNIVACNASLYSLAEMGRLREAKTMFNG 497
Query: 309 ------------YNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASD 356
YN+++ ++ G VD+A + M R+ C PD+ +++ + A
Sbjct: 498 LRENGLAPDSVTYNMMMKCYSKVGQVDEAVNLLSEMIRNGCEPDVIVVNSLIDSLYKAGR 557
Query: 357 MEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTT 416
++ A + F R+K P V+TY TL+ G K ++K +E+++ M PN F T
Sbjct: 558 VDEAWQMFDRMKDMKLSPTVVTYNTLLSGLGKEGRVQKAIELFESMIXKKCSPNTISFNT 617
Query: 417 IMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILL 453
++D + KN + + A+ + +M PD N ++
Sbjct: 618 LLDCFCKNDEVELALKMFSKMTVMDCKPDVLTYNTVI 654
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 102/390 (26%), Positives = 181/390 (46%), Gaps = 7/390 (1%)
Query: 79 VSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALM 138
++ VL +R ++ + N + LI + G +A +V M +G PS+ +++ALM
Sbjct: 176 MTTVLNKMR-KAGFVLNAYSYNGLIHLLIQSGFCGEALEVYRRMVSEGLKPSLKTYSALM 234
Query: 139 EAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKS 198
A G+ + + + M+ G RP+ T+ I +++ A K EA E+F + DE
Sbjct: 235 VALGKKRDSEMVMVLLKEMEDLGLRPNVYTFTICIRVLGRAGKIDEAYEIFRRMDDE--- 291
Query: 199 PLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEV--- 255
PD + ++I AG E A++LF M G + V Y +L+ ++ ++
Sbjct: 292 GCGPDLVTYTVLIDALCNAGQLENAKELFVKMKANGHKPDQVIYITLLDKFNDFGDLDTF 351
Query: 256 SKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDA 315
+ + QM+ G PDVV++ +L++ KAR +EA A F+ M G+ P YN L+
Sbjct: 352 KEFWSQMEADGYMPDVVTFTILVDVLCKARDFDEAFATFDVMRKQGILPNLHTYNTLICG 411
Query: 316 FAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPN 375
+G ++ A + M P +Y T + + + + A + F ++K G VPN
Sbjct: 412 LLRAGRIEDALKLLDTMESVGVQPTAYTYITFIDYFGKSGETGKAVETFEKMKAKGIVPN 471
Query: 376 VITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYK 435
++ + A++ L + +++ +R NG+ P+ + +M Y K D AV
Sbjct: 472 IVACNASLYSLAEMGRLREAKTMFNGLRENGLAPDSVTYNMMMKCYSKVGQVDEAVNLLS 531
Query: 436 EMESCGFPPDQKAKNILLSLAKTADERNEA 465
EM G PD N L+ A +EA
Sbjct: 532 EMIRNGCEPDVIVVNSLIDSLYKAGRVDEA 561
Score = 146 bits (369), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 115/464 (24%), Positives = 209/464 (45%), Gaps = 31/464 (6%)
Query: 3 MLAPRKFMQK---RRKVE----VFKDAADEAGKKNWRRLMNQIEEVGSAVAVLRSERTRG 55
M A +FMQK RR ++ +FK + G + ++N++ + G VL + G
Sbjct: 141 MAAVFEFMQKKIIRRDLDTYLTIFKALSIRGGLRQMTTVLNKMRKAG---FVLNAYSYNG 197
Query: 56 QPLPKDLVLGTLVRLKQLKKWNVVSEVLEWLR--IQSWWDFNEMDFLMLITAYGKQGDFN 113
L+ L L + E LE R + + + L+ A GK+ D
Sbjct: 198 -----------LIHL--LIQSGFCGEALEVYRRMVSEGLKPSLKTYSALMVALGKKRDSE 244
Query: 114 KAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIIL 173
+L M G P+V + T + GR G+ A IFRRM G P +TY +++
Sbjct: 245 MVMVLLKEMEDLGLRPNVYTFTICIRVLGRAGKIDEAYEIFRRMDDEGCGPDLVTYTVLI 304
Query: 174 KLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAER 233
A + + A+E+F+ + + + KPDQ ++ ++ + G + ++ ++ M
Sbjct: 305 DALCNAGQLENAKELFVKM---KANGHKPDQVIYITLLDKFNDFGDLDTFKEFWSQMEAD 361
Query: 234 GVQQSTVTYNSLMSFET---NYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEA 290
G VT+ L+ ++ E +D M++ G+ P++ +Y LI +A R E+A
Sbjct: 362 GYMPDVVTFTILVDVLCKARDFDEAFATFDVMRKQGILPNLHTYNTLICGLLRAGRIEDA 421
Query: 291 LAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSA 350
L + + M GV+PT Y +D F SG +A F+ M+ P+I + L +
Sbjct: 422 LKLLDTMESVGVQPTAYTYITFIDYFGKSGETGKAVETFEKMKAKGIVPNIVACNASLYS 481
Query: 351 YVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPN 410
+ A+ F L+++G P+ +TY ++K Y+KV +++ + + +M NG +P+
Sbjct: 482 LAEMGRLREAKTMFNGLRENGLAPDSVTYNMMMKCYSKVGQVDEAVNLLSEMIRNGCEPD 541
Query: 411 QTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLS 454
+ +++D+ K D A + M+ P N LLS
Sbjct: 542 VIVVNSLIDSLYKAGRVDEAWQMFDRMKDMKLSPTVVTYNTLLS 585
Score = 138 bits (348), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 124/493 (25%), Positives = 209/493 (42%), Gaps = 68/493 (13%)
Query: 22 AADEAGKKNWRRLMNQIEEVGSAVAVLRSERTRGQPLPKDLVLGTLVRLKQLKKWNVVSE 81
A D + +++ +V AV +L SE R P +V+ +L+ L K V E
Sbjct: 504 APDSVTYNMMMKCYSKVGQVDEAVNLL-SEMIRNGCEPDVIVVNSLI--DSLYKAGRVDE 560
Query: 82 VLEWLRIQSWWDFNEM----------DFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSV 131
+W F+ M + L++ GK+G KA ++ M K +P+
Sbjct: 561 --------AWQMFDRMKDMKLSPTVVTYNTLLSGLGKEGRVQKAIELFESMIXKKCSPNT 612
Query: 132 VSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMT 191
+S L++ + + + A +F +M +P LTY ++ ++ NK A F
Sbjct: 613 ISFNTLLDCFCKNDEVELALKMFSKMTVMDCKPDVLTYNTVIYGLIKENKVNHAFWFFHQ 672
Query: 192 LLDEEKSPLKPDQKMFHMMI------------------YMYKK------------AGG-- 219
L K + PD ++ +MY+ GG
Sbjct: 673 L----KKSMHPDHVTICTLLPGLVKCGQIGDAISIARDFMYQVRFRVNRSFWEDLMGGTL 728
Query: 220 ----YEKARKLFALMAERGVQQSTVTYNSLMSFETNYKE---VSKIYDQM-QRAGLQPDV 271
+KA + G+ + L+ +K +I+D+ ++ G+ P +
Sbjct: 729 VEAEMDKAIIFAEELVLNGICREDSFLIPLVRVLCKHKRELYAYQIFDKFTKKLGISPTL 788
Query: 272 VSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKC 331
SY LI + E+A +F++M + G P +N+LL SG + + ++K
Sbjct: 789 ASYNCLIGELLEVHYTEKAWDLFKDMKNVGCAPDAFTFNMLLAVHGKSGKITELFELYKE 848
Query: 332 MRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNN 391
M RC PD +Y ++S+ +++++ A FF L F P TYG LI G AKV
Sbjct: 849 MISRRCKPDAITYNIVISSLAKSNNLDKALDFFYDLVSSDFRPTPRTYGPLIDGLAKVGR 908
Query: 392 LEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNI 451
LE+ M ++++M G KPN IF +++ YGK D ++A +K M + G PD K+ I
Sbjct: 909 LEEAMRLFEEMSDYGCKPNCAIFNILINGYGKIGDTETACQLFKRMVNEGIRPDLKSYTI 968
Query: 452 L---LSLAKTADE 461
L L LA DE
Sbjct: 969 LVDCLCLAGRVDE 981
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 98/365 (26%), Positives = 167/365 (45%), Gaps = 36/365 (9%)
Query: 99 FLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQ 158
+L + A +G + VL+ M K G+ + S+ L+ + G A ++RRM
Sbjct: 160 YLTIFKALSIRGGLRQMTTVLNKMRKAGFVLNAYSYNGLIHLLIQSGFCGEALEVYRRMV 219
Query: 159 SSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAG 218
S G +PS TY L V K +++E V + L + E L+P+ F + I + +AG
Sbjct: 220 SEGLKPSLKTYS---ALMVALGKKRDSEMVMVLLKEMEDLGLRPNVYTFTICIRVLGRAG 276
Query: 219 GYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSKIYDQMQRAGLQPDVVSYALLI 278
++A ++F +M G PD+V+Y +LI
Sbjct: 277 KIDEAYEIFR--------------------------------RMDDEGCGPDLVTYTVLI 304
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCS 338
+A A + E A +F +M G +P Y LLD F G +D + + M D
Sbjct: 305 DALCNAGQLENAKELFVKMKANGHKPDQVIYITLLDKFNDFGDLDTFKEFWSQMEADGYM 364
Query: 339 PDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEI 398
PD+ ++T ++ A D + A F +++ G +PN+ TY TLI G + +E +++
Sbjct: 365 PDVVTFTILVDVLCKARDFDEAFATFDVMRKQGILPNLHTYNTLICGLLRAGRIEDALKL 424
Query: 399 YDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNI-LLSLAK 457
D M G++P + T +D +GK+ + AV +++M++ G P+ A N L SLA+
Sbjct: 425 LDTMESVGVQPTAYTYITFIDYFGKSGETGKAVETFEKMKAKGIVPNIVACNASLYSLAE 484
Query: 458 TADER 462
R
Sbjct: 485 MGRLR 489
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 78/328 (23%), Positives = 162/328 (49%), Gaps = 6/328 (1%)
Query: 121 FMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEAN 180
F K G +P++ S+ L+ + A +F+ M++ G P A T+ ++L + ++
Sbjct: 778 FTKKLGISPTLASYNCLIGELLEVHYTEKAWDLFKDMKNVGCAPDAFTFNMLLAVHGKSG 837
Query: 181 KFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTV 240
K E E++ ++ KPD ++++I K+ +KA F + + +
Sbjct: 838 KITELFELYKEMISRR---CKPDAITYNIVISSLAKSNNLDKALDFFYDLVSSDFRPTPR 894
Query: 241 TYNSL---MSFETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEM 297
TY L ++ +E +++++M G +P+ + +LIN YGK E A +F+ M
Sbjct: 895 TYGPLIDGLAKVGRLEEAMRLFEEMSDYGCKPNCAIFNILINGYGKIGDTETACQLFKRM 954
Query: 298 LDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDM 357
++ G+RP K+Y IL+D ++G VD+A F ++ PD +Y +++ + M
Sbjct: 955 VNEGIRPDLKSYTILVDCLCLAGRVDEALYYFNELKSTGLDPDFIAYNRIINGLGKSQRM 1014
Query: 358 EGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTI 417
E A + ++ G VP++ TY +L+ +E+ +Y+++++ G++P+ + +
Sbjct: 1015 EEALALYNEMRNRGIVPDLYTYNSLMLNLGLAGMVEQAKRMYEELQLAGLEPDVFTYNAL 1074
Query: 418 MDAYGKNKDFDSAVVWYKEMESCGFPPD 445
+ Y +++ + A YK M G P+
Sbjct: 1075 IRGYSLSENPEHAYTVYKNMMVDGCNPN 1102
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 89/368 (24%), Positives = 174/368 (47%), Gaps = 6/368 (1%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
+++ ++ L+ + GD + ++ S M GY P VV+ T L++ + + A A F
Sbjct: 331 DQVIYITLLDKFNDFGDLDTFKEFWSQMEADGYMPDVVTFTILVDVLCKARDFDEAFATF 390
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
M+ G P+ TY ++ + A + ++A ++ T+ E ++P + I +
Sbjct: 391 DVMRKQGILPNLHTYNTLICGLLRAGRIEDALKLLDTM---ESVGVQPTAYTYITFIDYF 447
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYN-SLMSFET--NYKEVSKIYDQMQRAGLQPDV 271
K+G KA + F M +G+ + V N SL S +E +++ ++ GL PD
Sbjct: 448 GKSGETGKAVETFEKMKAKGIVPNIVACNASLYSLAEMGRLREAKTMFNGLRENGLAPDS 507
Query: 272 VSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKC 331
V+Y +++ Y K + +EA+ + EM+ G P N L+D+ +G VD+A +F
Sbjct: 508 VTYNMMMKCYSKVGQVDEAVNLLSEMIRNGCEPDVIVVNSLIDSLYKAGRVDEAWQMFDR 567
Query: 332 MRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNN 391
M+ + SP + +Y T+LS ++ A + F + PN I++ TL+ + K +
Sbjct: 568 MKDMKLSPTVVTYNTLLSGLGKEGRVQKAIELFESMIXKKCSPNTISFNTLLDCFCKNDE 627
Query: 392 LEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNI 451
+E ++++ KM V KP+ + T++ K + A ++ +++ P +
Sbjct: 628 VELALKMFSKMTVMDCKPDVLTYNTVIYGLIKENKVNHAFWFFHQLKKSMHPDHVTICTL 687
Query: 452 LLSLAKTA 459
L L K
Sbjct: 688 LPGLVKCG 695
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 87/327 (26%), Positives = 158/327 (48%), Gaps = 22/327 (6%)
Query: 73 LKKWN-VVSEVLEWLRIQSWWD-FNEM----------DFLMLITAYGKQGDFNKAEKVLS 120
L +N ++ E+LE + WD F +M F ML+ +GK G + ++
Sbjct: 788 LASYNCLIGELLEVHYTEKAWDLFKDMKNVGCAPDAFTFNMLLAVHGKSGKITELFELYK 847
Query: 121 FMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEAN 180
M + P +++ ++ + + A F + SS RP+ TY ++ +
Sbjct: 848 EMISRRCKPDAITYNIVISSLAKSNNLDKALDFFYDLVSSDFRPTPRTYGPLIDGLAKVG 907
Query: 181 KFKEAEEVFMTLLDEEKS--PLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQS 238
+ +EA +F EE S KP+ +F+++I Y K G E A +LF M G++
Sbjct: 908 RLEEAMRLF-----EEMSDYGCKPNCAIFNILINGYGKIGDTETACQLFKRMVNEGIRPD 962
Query: 239 TVTYNSL---MSFETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFE 295
+Y L + E +++++ GL PD ++Y +IN GK++R EEALA++
Sbjct: 963 LKSYTILVDCLCLAGRVDEALYYFNELKSTGLDPDFIAYNRIINGLGKSQRMEEALALYN 1022
Query: 296 EMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNAS 355
EM + G+ P YN L+ ++GMV+QA+ +++ ++ PD+ +Y ++ Y +
Sbjct: 1023 EMRNRGIVPDLYTYNSLMLNLGLAGMVEQAKRMYEELQLAGLEPDVFTYNALIRGYSLSE 1082
Query: 356 DMEGAEKFFRRLKQDGFVPNVITYGTL 382
+ E A ++ + DG PN+ TY L
Sbjct: 1083 NPEHAYTVYKNMMVDGCNPNIGTYAQL 1109
Score = 128 bits (322), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 72/265 (27%), Positives = 127/265 (47%), Gaps = 3/265 (1%)
Query: 218 GGYEKARKLFALMAERGVQQSTVTYNSLMSFETN---YKEVSKIYDQMQRAGLQPDVVSY 274
GG + + M + G + +YN L+ E ++Y +M GL+P + +Y
Sbjct: 171 GGLRQMTTVLNKMRKAGFVLNAYSYNGLIHLLIQSGFCGEALEVYRRMVSEGLKPSLKTY 230
Query: 275 ALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRR 334
+ L+ A GK R E + + +EM D G+RP + I + +G +D+A +F+ M
Sbjct: 231 SALMVALGKKRDSEMVMVLLKEMEDLGLRPNVYTFTICIRVLGRAGKIDEAYEIFRRMDD 290
Query: 335 DRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEK 394
+ C PD+ +YT ++ A NA +E A++ F ++K +G P+ + Y TL+ + +L+
Sbjct: 291 EGCGPDLVTYTVLIDALCNAGQLENAKELFVKMKANGHKPDQVIYITLLDKFNDFGDLDT 350
Query: 395 MMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLS 454
E + +M +G P+ FT ++D K +DFD A + M G P+ N L+
Sbjct: 351 FKEFWSQMEADGYMPDVVTFTILVDVLCKARDFDEAFATFDVMRKQGILPNLHTYNTLIC 410
Query: 455 LAKTADERNEANELLGNFNHPNNEP 479
A +A +LL +P
Sbjct: 411 GLLRAGRIEDALKLLDTMESVGVQP 435
Score = 125 bits (313), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 80/296 (27%), Positives = 143/296 (48%), Gaps = 6/296 (2%)
Query: 161 GPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGY 220
G P+ +Y ++ +E + ++A ++F D + PD F+M++ ++ K+G
Sbjct: 783 GISPTLASYNCLIGELLEVHYTEKAWDLFK---DMKNVGCAPDAFTFNMLLAVHGKSGKI 839
Query: 221 EKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSKIYD---QMQRAGLQPDVVSYALL 277
+ +L+ M R + +TYN ++S + K D + + +P +Y L
Sbjct: 840 TELFELYKEMISRRCKPDAITYNIVISSLAKSNNLDKALDFFYDLVSSDFRPTPRTYGPL 899
Query: 278 INAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRC 337
I+ K R EEA+ +FEEM D G +P +NIL++ + G + A +FK M +
Sbjct: 900 IDGLAKVGRLEEAMRLFEEMSDYGCKPNCAIFNILINGYGKIGDTETACQLFKRMVNEGI 959
Query: 338 SPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMME 397
PD+ SYT ++ A ++ A +F LK G P+ I Y +I G K +E+ +
Sbjct: 960 RPDLKSYTILVDCLCLAGRVDEALYYFNELKSTGLDPDFIAYNRIINGLGKSQRMEEALA 1019
Query: 398 IYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILL 453
+Y++MR GI P+ + ++M G + A Y+E++ G PD N L+
Sbjct: 1020 LYNEMRNRGIVPDLYTYNSLMLNLGLAGMVEQAKRMYEELQLAGLEPDVFTYNALI 1075
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 90/185 (48%), Gaps = 8/185 (4%)
Query: 99 FLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQ 158
F +LI YGK GD A ++ M +G P + S+T L++ GR A F ++
Sbjct: 931 FNILINGYGKIGDTETACQLFKRMVNEGIRPDLKSYTILVDCLCLAGRVDEALYYFNELK 990
Query: 159 SSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKS-PLKPDQKMFHMMIYMYKKA 217
S+G P + Y I+ ++ + +EA + L +E ++ + PD ++ ++ A
Sbjct: 991 STGLDPDFIAYNRIINGLGKSQRMEEA----LALYNEMRNRGIVPDLYTYNSLMLNLGLA 1046
Query: 218 GGYEKARKLFALMAERGVQQSTVTYNSLM---SFETNYKEVSKIYDQMQRAGLQPDVVSY 274
G E+A++++ + G++ TYN+L+ S N + +Y M G P++ +Y
Sbjct: 1047 GMVEQAKRMYEELQLAGLEPDVFTYNALIRGYSLSENPEHAYTVYKNMMVDGCNPNIGTY 1106
Query: 275 ALLIN 279
A L N
Sbjct: 1107 AQLPN 1111
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/268 (21%), Positives = 111/268 (41%), Gaps = 3/268 (1%)
Query: 235 VQQSTVTYNSLMSFETNYKEV---SKIYDQMQRAGLQPDVVSYALLINAYGKARREEEAL 291
V +T T N ++ F + +V + +++ MQ+ ++ D+ +Y + A +
Sbjct: 118 VLHTTETCNFMLEFLRVHDKVEDMAAVFEFMQKKIIRRDLDTYLTIFKALSIRGGLRQMT 177
Query: 292 AVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAY 351
V +M AG +YN L+ SG +A V++ M + P + +Y+ ++ A
Sbjct: 178 TVLNKMRKAGFVLNAYSYNGLIHLLIQSGFCGEALEVYRRMVSEGLKPSLKTYSALMVAL 237
Query: 352 VNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQ 411
D E + ++ G PNV T+ I+ + +++ EI+ +M G P+
Sbjct: 238 GKKRDSEMVMVLLKEMEDLGLRPNVYTFTICIRVLGRAGKIDEAYEIFRRMDDEGCGPDL 297
Query: 412 TIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGN 471
+T ++DA ++A + +M++ G PDQ LL + + E
Sbjct: 298 VTYTVLIDALCNAGQLENAKELFVKMKANGHKPDQVIYITLLDKFNDFGDLDTFKEFWSQ 357
Query: 472 FNHPNNEPGINGLSISVDEEDDDDDDDE 499
P + +I VD D DE
Sbjct: 358 MEADGYMPDVVTFTILVDVLCKARDFDE 385
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/217 (23%), Positives = 93/217 (42%), Gaps = 14/217 (6%)
Query: 287 EEEALAVFEEMLDA--------------GVRPTHKAYNILLDAFAISGMVDQARTVFKCM 332
E+E L V + M D V T + N +L+ + V+ VF+ M
Sbjct: 89 EDEVLGVLKSMTDPIRALSYFYSISEFPTVLHTTETCNFMLEFLRVHDKVEDMAAVFEFM 148
Query: 333 RRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNL 392
++ D+ +Y T+ A + ++++ GFV N +Y LI +
Sbjct: 149 QKKIIRRDLDTYLTIFKALSIRGGLRQMTTVLNKMRKAGFVLNAYSYNGLIHLLIQSGFC 208
Query: 393 EKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNIL 452
+ +E+Y +M G+KP+ ++ +M A GK +D + +V KEME G P+ I
Sbjct: 209 GEALEVYRRMVSEGLKPSLKTYSALMVALGKKRDSEMVMVLLKEMEDLGLRPNVYTFTIC 268
Query: 453 LSLAKTADERNEANELLGNFNHPNNEPGINGLSISVD 489
+ + A + +EA E+ + P + ++ +D
Sbjct: 269 IRVLGRAGKIDEAYEIFRRMDDEGCGPDLVTYTVLID 305
>gi|449469490|ref|XP_004152453.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74850,
chloroplastic-like [Cucumis sativus]
Length = 864
Score = 148 bits (373), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 95/371 (25%), Positives = 173/371 (46%), Gaps = 9/371 (2%)
Query: 76 WNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHT 135
W + ++++ Q W NE + ++I+ G++G K ++ M +G SV S+T
Sbjct: 128 WQRSLRLFKYMQRQIWCKPNEHIYTIIISLLGREGLLEKCSEIFDEMASQGVIRSVFSYT 187
Query: 136 ALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDE 195
AL+ AYGR G+Y+ + + RM+ P+ LTY ++ + + E + +
Sbjct: 188 ALINAYGRNGQYETSLELLERMKRERVSPNILTYNTVINACARGDL--DWEGLLGLFAEM 245
Query: 196 EKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFET----- 250
++PD ++ ++ G ++A +F M E G+ TY+ ++ ET
Sbjct: 246 RHEGVQPDLVTYNTLLSACAARGLGDEAEMVFKTMIEGGIVPEITTYSYIV--ETFGKLG 303
Query: 251 NYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYN 310
++V+ + +M+ G PD+ SY +LI A+ K +EA+ VF++M AG P Y+
Sbjct: 304 KLEKVAMLLKEMESEGYLPDISSYNVLIEAHAKLGSIKEAMDVFKQMQAAGCVPNASTYS 363
Query: 311 ILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQD 370
ILL+ + G D R +F M+ PD +Y ++ + + F L +
Sbjct: 364 ILLNLYGKHGRYDDVRELFLQMKESSAEPDATTYNILIRVFGEGGYFKEVVTLFHDLVDE 423
Query: 371 GFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSA 430
PN+ TY L+ K E +I M GI P+ ++ +++AYG+ +D A
Sbjct: 424 NIDPNMETYEGLVFACGKGGLHEDAKKILFHMNGKGIVPSSKAYSGLIEAYGQAALYDEA 483
Query: 431 VVWYKEMESCG 441
+V + M G
Sbjct: 484 LVAFNTMNEVG 494
Score = 141 bits (356), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 88/353 (24%), Positives = 176/353 (49%), Gaps = 16/353 (4%)
Query: 145 GRYK-NAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSP---- 199
G+Y + E + ++ S PR S I K + N F + F D ++S
Sbjct: 77 GKYSYDVETLINKLSSLPPRGSIARCLDIFKNRLSLNDFSLVFKEFAARGDWQRSLRLFK 136
Query: 200 -------LKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLM-SFETN 251
KP++ ++ ++I + + G EK ++F MA +GV +S +Y +L+ ++ N
Sbjct: 137 YMQRQIWCKPNEHIYTIIISLLGREGLLEKCSEIFDEMASQGVIRSVFSYTALINAYGRN 196
Query: 252 --YKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEAL-AVFEEMLDAGVRPTHKA 308
Y+ ++ ++M+R + P++++Y +INA + + E L +F EM GV+P
Sbjct: 197 GQYETSLELLERMKRERVSPNILTYNTVINACARGDLDWEGLLGLFAEMRHEGVQPDLVT 256
Query: 309 YNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLK 368
YN LL A A G+ D+A VFK M P+I +Y+ ++ + +E + ++
Sbjct: 257 YNTLLSACAARGLGDEAEMVFKTMIEGGIVPEITTYSYIVETFGKLGKLEKVAMLLKEME 316
Query: 369 QDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFD 428
+G++P++ +Y LI+ +AK+ ++++ M+++ +M+ G PN + ++ +++ YGK+ +D
Sbjct: 317 SEGYLPDISSYNVLIEAHAKLGSIKEAMDVFKQMQAAGCVPNASTYSILLNLYGKHGRYD 376
Query: 429 SAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGI 481
+ +M+ PD NIL+ + E L + N +P +
Sbjct: 377 DVRELFLQMKESSAEPDATTYNILIRVFGEGGYFKEVVTLFHDLVDENIDPNM 429
Score = 128 bits (321), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 82/371 (22%), Positives = 176/371 (47%), Gaps = 6/371 (1%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
L++A +G ++AE V M + G P + +++ ++E +G+ G+ + + + M+S G
Sbjct: 260 LLSACAARGLGDEAEMVFKTMIEGGIVPEITTYSYIVETFGKLGKLEKVAMLLKEMESEG 319
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
P +Y ++++ + KEA +VF + + + P+ + +++ +Y K G Y+
Sbjct: 320 YLPDISSYNVLIEAHAKLGSIKEAMDVFKQM---QAAGCVPNASTYSILLNLYGKHGRYD 376
Query: 222 KARKLFALMAERGVQQSTVTYNSLMSF--ETNY-KEVSKIYDQMQRAGLQPDVVSYALLI 278
R+LF M E + TYN L+ E Y KEV ++ + + P++ +Y L+
Sbjct: 377 DVRELFLQMKESSAEPDATTYNILIRVFGEGGYFKEVVTLFHDLVDENIDPNMETYEGLV 436
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCS 338
A GK E+A + M G+ P+ KAY+ L++A+ + + D+A F M
Sbjct: 437 FACGKGGLHEDAKKILFHMNGKGIVPSSKAYSGLIEAYGQAALYDEALVAFNTMNEVGSK 496
Query: 339 PDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEI 398
I +Y +++ + + E R+++ G N ++ +I+GY + E+ ++
Sbjct: 497 STIDTYNSLIHTFARGGLYKEFEAILSRMREYGISRNAKSFSGIIEGYRQSGQYEEAIKA 556
Query: 399 YDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKT 458
+ +M + ++ ++ Y D + + E+++ G P ++L++
Sbjct: 557 FVEMEKMRCELDEQTLEGVLGVYCFAGLVDESKEQFIEIKASGILPSVLCYCMMLAVYAK 616
Query: 459 ADERNEANELL 469
++A+ELL
Sbjct: 617 NGRWDDASELL 627
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 86/349 (24%), Positives = 164/349 (46%), Gaps = 6/349 (1%)
Query: 122 MNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANK 181
M +G P +V++ L+ A G AE +F+ M G P TY I++ F K
Sbjct: 245 MRHEGVQPDLVTYNTLLSACAARGLGDEAEMVFKTMIEGGIVPEITTYSYIVETF---GK 301
Query: 182 FKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVT 241
+ E+V M L + E PD ++++I + K G ++A +F M G + T
Sbjct: 302 LGKLEKVAMLLKEMESEGYLPDISSYNVLIEAHAKLGSIKEAMDVFKQMQAAGCVPNAST 361
Query: 242 YNSLMSF---ETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEML 298
Y+ L++ Y +V +++ QM+ + +PD +Y +LI +G+ +E + +F +++
Sbjct: 362 YSILLNLYGKHGRYDDVRELFLQMKESSAEPDATTYNILIRVFGEGGYFKEVVTLFHDLV 421
Query: 299 DAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDME 358
D + P + Y L+ A G+ + A+ + M P +Y+ ++ AY A+ +
Sbjct: 422 DENIDPNMETYEGLVFACGKGGLHEDAKKILFHMNGKGIVPSSKAYSGLIEAYGQAALYD 481
Query: 359 GAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIM 418
A F + + G + TY +LI +A+ ++ I +MR GI N F+ I+
Sbjct: 482 EALVAFNTMNEVGSKSTIDTYNSLIHTFARGGLYKEFEAILSRMREYGISRNAKSFSGII 541
Query: 419 DAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANE 467
+ Y ++ ++ A+ + EME D++ +L + A +E+ E
Sbjct: 542 EGYRQSGQYEEAIKAFVEMEKMRCELDEQTLEGVLGVYCFAGLVDESKE 590
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 79/387 (20%), Positives = 170/387 (43%), Gaps = 43/387 (11%)
Query: 98 DFLMLITAYGKQGDFNKAEKVLSFMNKKGYA-PSVVSHTALMEAYGRGGRYKNAEAIFRR 156
DF ++ + +GD+ ++ ++ +M ++ + P+ +T ++ GR G + IF
Sbjct: 114 DFSLVFKEFAARGDWQRSLRLFKYMQRQIWCKPNEHIYTIIISLLGREGLLEKCSEIFDE 173
Query: 157 MQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKK 216
M S G S +Y +I Y +
Sbjct: 174 MASQGVIRSVFSYT--------------------------------------ALINAYGR 195
Query: 217 AGGYEKARKLFALMAERGVQQSTVTYNSLMSF----ETNYKEVSKIYDQMQRAGLQPDVV 272
G YE + +L M V + +TYN++++ + +++ + ++ +M+ G+QPD+V
Sbjct: 196 NGQYETSLELLERMKRERVSPNILTYNTVINACARGDLDWEGLLGLFAEMRHEGVQPDLV 255
Query: 273 SYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCM 332
+Y L++A +EA VF+ M++ G+ P Y+ +++ F G +++ + K M
Sbjct: 256 TYNTLLSACAARGLGDEAEMVFKTMIEGGIVPEITTYSYIVETFGKLGKLEKVAMLLKEM 315
Query: 333 RRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNL 392
+ PDI SY ++ A+ ++ A F++++ G VPN TY L+ Y K
Sbjct: 316 ESEGYLPDISSYNVLIEAHAKLGSIKEAMDVFKQMQAAGCVPNASTYSILLNLYGKHGRY 375
Query: 393 EKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNIL 452
+ + E++ +M+ + +P+ T + ++ +G+ F V + ++ P+ + L
Sbjct: 376 DDVRELFLQMKESSAEPDATTYNILIRVFGEGGYFKEVVTLFHDLVDENIDPNMETYEGL 435
Query: 453 LSLAKTADERNEANELLGNFNHPNNEP 479
+ +A ++L + N P
Sbjct: 436 VFACGKGGLHEDAKKILFHMNGKGIVP 462
>gi|356577532|ref|XP_003556878.1| PREDICTED: pentatricopeptide repeat-containing protein At5g04810,
chloroplastic-like [Glycine max]
Length = 932
Score = 148 bits (373), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 102/417 (24%), Positives = 195/417 (46%), Gaps = 40/417 (9%)
Query: 72 QLKKWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSV 131
Q + W V E ++ + ++ +++ YG++GD + A + M +G PS
Sbjct: 265 QPENWQAVVTAFERIKKPA-----RKEYGLMVKYYGRRGDMHHARQTFESMRARGIEPSS 319
Query: 132 VSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANK-------FKE 184
+++L+ AY G + A R+M+ G + +TY II+ F + F+E
Sbjct: 320 HVYSSLIHAYAVGRDMEEALHCVRKMKEEGIEMTIVTYSIIVGGFAKMGNADAADHWFEE 379
Query: 185 AEEVFMTL-----------------LDEEKSPLKPDQK--------MFHMMIYMYKKAGG 219
A+E +L +D ++ ++ ++ ++H M+ Y G
Sbjct: 380 AKEKLPSLNAVIYGGIIYAHCQICNMDRAEALVREMEEQGIDAPIDIYHTMMDGYTMIGN 439
Query: 220 YEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSK---IYDQMQRAGLQPDVVSYAL 276
EK +F + E G S ++Y L++ T +VSK I M+ +G++ ++ +Y++
Sbjct: 440 EEKCLIVFDRLKECGFFPSVISYGCLINLYTKVGKVSKALEISKMMKMSGIKHNMKTYSM 499
Query: 277 LINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDR 336
LIN + K + A +VFE+ G++P YN ++ AF G +D+A + + M+++R
Sbjct: 500 LINGFLKLKDWANAFSVFEDFTKDGLKPDVVLYNNIITAFCGMGNMDRAICMVRQMQKER 559
Query: 337 CSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMM 396
P ++ ++ + A +M A + F +++ G +P V TY LI G + + K +
Sbjct: 560 HRPTTRTFLPIIHGFARAGEMRRALEIFDMMRRSGCIPTVHTYNALILGLVEKRQMTKAV 619
Query: 397 EIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILL 453
I D+M V G+ PN+ +TT+M Y D + A ++ + + G D LL
Sbjct: 620 AILDEMNVAGVGPNEHTYTTLMQGYASLGDTEKAFQYFTVLRNEGLEIDVYTYEALL 676
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 105/388 (27%), Positives = 183/388 (47%), Gaps = 10/388 (2%)
Query: 58 LPKDLVLGTLVRLKQLKKWNVVSEVLEWLRIQ--SWWDFNEMDFLMLITAYGKQGDFNKA 115
P + G L+ L K VS+ LE ++ S N + MLI + K D+ A
Sbjct: 456 FPSVISYGCLINL--YTKVGKVSKALEISKMMKMSGIKHNMKTYSMLINGFLKLKDWANA 513
Query: 116 EKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKL 175
V K G P VV + ++ A+ G A + R+MQ RP+ T+ I+
Sbjct: 514 FSVFEDFTKDGLKPDVVLYNNIITAFCGMGNMDRAICMVRQMQKERHRPTTRTFLPIIHG 573
Query: 176 FVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGV 235
F A + + A E+F + +S P ++ +I + KA + M GV
Sbjct: 574 FARAGEMRRALEIFDMM---RRSGCIPTVHTYNALILGLVEKRQMTKAVAILDEMNVAGV 630
Query: 236 QQSTVTYNSLMSFETNYKEVSKIYDQ---MQRAGLQPDVVSYALLINAYGKARREEEALA 292
+ TY +LM + + K + ++ GL+ DV +Y L+ + K+ R + ALA
Sbjct: 631 GPNEHTYTTLMQGYASLGDTEKAFQYFTVLRNEGLEIDVYTYEALLKSCCKSGRMQSALA 690
Query: 293 VFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYV 352
V +EM + YNIL+D +A G V +A + + MR++ PDI +YT+ ++A
Sbjct: 691 VTKEMSAKNIPRNTFVYNILIDGWARRGDVWEAADLMQQMRKEGLLPDIHTYTSFINACC 750
Query: 353 NASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQT 412
A DM+ A + + ++ G PN+ TY TLI G+A+ + EK + +++M++ G KP++
Sbjct: 751 KAGDMQKATEIIQEMEASGIKPNLKTYTTLINGWARASMPEKALSCFEEMKLAGFKPDKA 810
Query: 413 IFTTIMDAYGKNKDFDSAVVWYKEMESC 440
++ ++ + F + V+ + C
Sbjct: 811 VYHCLVTSLLSRATFAQSYVYSGLLSVC 838
Score = 108 bits (269), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 69/257 (26%), Positives = 126/257 (49%), Gaps = 3/257 (1%)
Query: 201 KPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLM---SFETNYKEVSK 257
KP +K + +M+ Y + G AR+ F M RG++ S+ Y+SL+ + + +E
Sbjct: 281 KPARKEYGLMVKYYGRRGDMHHARQTFESMRARGIEPSSHVYSSLIHAYAVGRDMEEALH 340
Query: 258 IYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFA 317
+M+ G++ +V+Y++++ + K + A FEE + Y ++ A
Sbjct: 341 CVRKMKEEGIEMTIVTYSIIVGGFAKMGNADAADHWFEEAKEKLPSLNAVIYGGIIYAHC 400
Query: 318 ISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVI 377
+D+A + + M I Y TM+ Y + E F RLK+ GF P+VI
Sbjct: 401 QICNMDRAEALVREMEEQGIDAPIDIYHTMMDGYTMIGNEEKCLIVFDRLKECGFFPSVI 460
Query: 378 TYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEM 437
+YG LI Y KV + K +EI M+++GIK N ++ +++ + K KD+ +A +++
Sbjct: 461 SYGCLINLYTKVGKVSKALEISKMMKMSGIKHNMKTYSMLINGFLKLKDWANAFSVFEDF 520
Query: 438 ESCGFPPDQKAKNILLS 454
G PD N +++
Sbjct: 521 TKDGLKPDVVLYNNIIT 537
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/218 (20%), Positives = 104/218 (47%), Gaps = 4/218 (1%)
Query: 251 NYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYN 310
N++ V ++++++ P Y L++ YG+ A FE M G+ P+ Y+
Sbjct: 268 NWQAVVTAFERIKK----PARKEYGLMVKYYGRRGDMHHARQTFESMRARGIEPSSHVYS 323
Query: 311 ILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQD 370
L+ A+A+ +++A + M+ + I +Y+ ++ + + + A+ +F K+
Sbjct: 324 SLIHAYAVGRDMEEALHCVRKMKEEGIEMTIVTYSIIVGGFAKMGNADAADHWFEEAKEK 383
Query: 371 GFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSA 430
N + YG +I + ++ N+++ + +M GI I+ T+MD Y + +
Sbjct: 384 LPSLNAVIYGGIIYAHCQICNMDRAEALVREMEEQGIDAPIDIYHTMMDGYTMIGNEEKC 443
Query: 431 VVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANEL 468
++ + ++ CGF P + L++L + ++A E+
Sbjct: 444 LIVFDRLKECGFFPSVISYGCLINLYTKVGKVSKALEI 481
>gi|222635128|gb|EEE65260.1| hypothetical protein OsJ_20463 [Oryza sativa Japonica Group]
Length = 1443
Score = 148 bits (373), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 85/346 (24%), Positives = 174/346 (50%), Gaps = 8/346 (2%)
Query: 99 FLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAI--FRR 156
F ++ Y + G F+ A ++L M + P +VS L+ A + G A+
Sbjct: 224 FNAMMGVYARSGRFDDARQLLDAMRDQDIEPDLVSFNTLINARAKSGCLAAGVALELLHE 283
Query: 157 MQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKK 216
++ +G RP A+TY ++ + + +A VF ++ E +PD ++ M+ ++ +
Sbjct: 284 VRQAGLRPDAITYNTLISACSQGSNLDDAVAVFEEMIASE---CRPDLWTYNAMVSVHGR 340
Query: 217 AGGYEKARKLFALMAERGVQQSTVTYNSLM---SFETNYKEVSKIYDQMQRAGLQPDVVS 273
G ++A +F + E+G Q VTYNSL+ + E + + V ++ +++ +AG + D ++
Sbjct: 341 CGKAQEAELMFKELVEKGFQPDAVTYNSLLYAFAKEGDVERVERVCEELVKAGFRKDGIT 400
Query: 274 YALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMR 333
Y +I+ YGK R + AL +++EM G P Y +L+D+ + +A V + M
Sbjct: 401 YNTMIHMYGKMGRLDLALGLYDEMRAIGCTPDAVTYTVLVDSLGKMDRISEAGKVLEEMA 460
Query: 334 RDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLE 393
P + +++ ++ AY + + AE+ F R+ + G P+ + Y ++ +A+ +
Sbjct: 461 DAGLKPTLVTFSALICAYAKSGRQDDAERTFDRMVESGVKPDRLAYLVMLDVFARSDETR 520
Query: 394 KMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMES 439
K+M +Y M +G KP+ ++ ++ A K + D ++ME+
Sbjct: 521 KLMVLYRAMIKDGYKPDDGLYQVLLAALAKGNEHDEIEGVIQDMEA 566
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 97/405 (23%), Positives = 183/405 (45%), Gaps = 8/405 (1%)
Query: 72 QLKKWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSV 131
+LK W ++ L+ +S D + LI AY + G + A + M KKG P+V
Sbjct: 760 KLKLWQQAENFVKGLKQESGVDRRIWN--ALIHAYAESGLYEHARAIFDIMIKKGPLPTV 817
Query: 132 VSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMT 191
S +M A GR + + +Q + S T ++L+ F +A E +++
Sbjct: 818 ESVNGMMRALIVDGRLDELYVVVQELQDLDIKISKSTVLLMLEAFAKAGDVFEVMKIYNG 877
Query: 192 LLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFET- 250
+ + + P+ ++ +MI + + + A M G + V N+L+ T
Sbjct: 878 M---KAAGYLPNMHLYRIMISLLCHNKRFRDVELMVAEMEGAGFKPDLVVLNTLLLMYTG 934
Query: 251 --NYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKA 308
N+ ++Y + AGL+PD +Y LI Y + R EE + EM G+ P ++
Sbjct: 935 TGNFDRTIEVYHSILEAGLEPDEDTYNTLIVMYSRNFRPEEGFTLLYEMGKRGLTPKLES 994
Query: 309 YNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLK 368
Y ILL A + + +QA +F+ MR + Y M+ Y NA + AE +K
Sbjct: 995 YKILLAASGKAKLWEQADLLFEEMRTKGYRLNRSIYHMMMKIYRNARNHSKAEHLLSAMK 1054
Query: 369 QDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFD 428
+DG P + T L+ Y + ++ ++ + ++ + ++ + ++T++DAY +N+D+
Sbjct: 1055 EDGIEPTIATMHILMTSYGTSGHPDEAEKVLNSLKSSNLEISTLPYSTVLDAYLRNRDYS 1114
Query: 429 SAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFN 473
+ EM+ G PD + + A ++ ++A LL +
Sbjct: 1115 LGITKLLEMKRDGVEPDHQVWTSFIRAASLCEQTDDAILLLKSLQ 1159
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 74/265 (27%), Positives = 139/265 (52%), Gaps = 10/265 (3%)
Query: 185 AEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNS 244
AE+VF+ E + ++F+ M+ +Y ++G ++ AR+L M ++ ++ V++N+
Sbjct: 207 AEDVFLRFAREGAT-----VQVFNAMMGVYARSGRFDDARQLLDAMRDQDIEPDLVSFNT 261
Query: 245 LMSFETNYKEVS-----KIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLD 299
L++ ++ ++ ++++AGL+PD ++Y LI+A + ++A+AVFEEM+
Sbjct: 262 LINARAKSGCLAAGVALELLHEVRQAGLRPDAITYNTLISACSQGSNLDDAVAVFEEMIA 321
Query: 300 AGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEG 359
+ RP YN ++ G +A +FK + PD +Y ++L A+ D+E
Sbjct: 322 SECRPDLWTYNAMVSVHGRCGKAQEAELMFKELVEKGFQPDAVTYNSLLYAFAKEGDVER 381
Query: 360 AEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMD 419
E+ L + GF + ITY T+I Y K+ L+ + +YD+MR G P+ +T ++D
Sbjct: 382 VERVCEELVKAGFRKDGITYNTMIHMYGKMGRLDLALGLYDEMRAIGCTPDAVTYTVLVD 441
Query: 420 AYGKNKDFDSAVVWYKEMESCGFPP 444
+ GK A +EM G P
Sbjct: 442 SLGKMDRISEAGKVLEEMADAGLKP 466
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 78/294 (26%), Positives = 136/294 (46%), Gaps = 9/294 (3%)
Query: 223 ARKLFALMAERGVQQSTVTYNSLMSF---ETNYKEVSKIYDQMQRAGLQPDVVSYALLIN 279
A +F A G + +N++M + + ++ D M+ ++PD+VS+ LIN
Sbjct: 207 AEDVFLRFAREGA--TVQVFNAMMGVYARSGRFDDARQLLDAMRDQDIEPDLVSFNTLIN 264
Query: 280 AYGKA--RREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRC 337
A K+ AL + E+ AG+RP YN L+ A + +D A VF+ M C
Sbjct: 265 ARAKSGCLAAGVALELLHEVRQAGLRPDAITYNTLISACSQGSNLDDAVAVFEEMIASEC 324
Query: 338 SPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMME 397
PD+ +Y M+S + + AE F+ L + GF P+ +TY +L+ +AK ++E++
Sbjct: 325 RPDLWTYNAMVSVHGRCGKAQEAELMFKELVEKGFQPDAVTYNSLLYAFAKEGDVERVER 384
Query: 398 IYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAK 457
+ +++ G + + + T++ YGK D A+ Y EM + G PD +L+
Sbjct: 385 VCEELVKAGFRKDGITYNTMIHMYGKMGRLDLALGLYDEMRAIGCTPDAVTYTVLVDSLG 444
Query: 458 TADERNEANELLGNFNHPNNEPGINGLS--ISVDEEDDDDDDDEDDDDNIYHDG 509
D +EA ++L +P + S I + DD E D + G
Sbjct: 445 KMDRISEAGKVLEEMADAGLKPTLVTFSALICAYAKSGRQDDAERTFDRMVESG 498
Score = 95.9 bits (237), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 84/377 (22%), Positives = 155/377 (41%), Gaps = 36/377 (9%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
+I AYGK + +AE + + ++ + + AL+ AY G Y++A AIF M G
Sbjct: 754 MIEAYGKLKLWQQAENFVKGLKQESGVDRRIWN-ALIHAYAESGLYEHARAIFDIMIKKG 812
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
P P+ + +++ + + E V L D + +K + +M+ + KAG
Sbjct: 813 PLPTVESVNGMMRALIVDGRLDELYVVVQELQDLD---IKISKSTVLLMLEAFAKAG--- 866
Query: 222 KARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSKIYDQMQRAGLQPDVVSYALLINAY 281
+ EV KIY+ M+ AG P++ Y ++I+
Sbjct: 867 -----------------------------DVFEVMKIYNGMKAAGYLPNMHLYRIMISLL 897
Query: 282 GKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDI 341
+R + + EM AG +P N LL + +G D+ V+ + PD
Sbjct: 898 CHNKRFRDVELMVAEMEGAGFKPDLVVLNTLLLMYTGTGNFDRTIEVYHSILEAGLEPDE 957
Query: 342 CSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDK 401
+Y T++ Y E + + G P + +Y L+ K E+ ++++
Sbjct: 958 DTYNTLIVMYSRNFRPEEGFTLLYEMGKRGLTPKLESYKILLAASGKAKLWEQADLLFEE 1017
Query: 402 MRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADE 461
MR G + N++I+ +M Y ++ A M+ G P +IL++ T+
Sbjct: 1018 MRTKGYRLNRSIYHMMMKIYRNARNHSKAEHLLSAMKEDGIEPTIATMHILMTSYGTSGH 1077
Query: 462 RNEANELLGNFNHPNNE 478
+EA ++L + N E
Sbjct: 1078 PDEAEKVLNSLKSSNLE 1094
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 62/300 (20%), Positives = 133/300 (44%), Gaps = 3/300 (1%)
Query: 203 DQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMS---FETNYKEVSKIY 259
D+++++ +I+ Y ++G YE AR +F +M ++G + + N +M + E+ +
Sbjct: 781 DRRIWNALIHAYAESGLYEHARAIFDIMIKKGPLPTVESVNGMMRALIVDGRLDELYVVV 840
Query: 260 DQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAIS 319
++Q ++ + L++ A+ KA E + ++ M AG P Y I++ +
Sbjct: 841 QELQDLDIKISKSTVLLMLEAFAKAGDVFEVMKIYNGMKAAGYLPNMHLYRIMISLLCHN 900
Query: 320 GMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITY 379
+ M PD+ T+L Y + + + + + + G P+ TY
Sbjct: 901 KRFRDVELMVAEMEGAGFKPDLVVLNTLLLMYTGTGNFDRTIEVYHSILEAGLEPDEDTY 960
Query: 380 GTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMES 439
TLI Y++ E+ + +M G+ P + ++ A GK K ++ A + ++EM +
Sbjct: 961 NTLIVMYSRNFRPEEGFTLLYEMGKRGLTPKLESYKILLAASGKAKLWEQADLLFEEMRT 1020
Query: 440 CGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGINGLSISVDEEDDDDDDDE 499
G+ ++ ++++ + + A ++A LL EP I + I + DE
Sbjct: 1021 KGYRLNRSIYHMMMKIYRNARNHSKAEHLLSAMKEDGIEPTIATMHILMTSYGTSGHPDE 1080
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 76/363 (20%), Positives = 166/363 (45%), Gaps = 7/363 (1%)
Query: 96 EMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFR 155
EM+ L++ + K ++ +L +GY P S ++++AY + G+++ ++
Sbjct: 569 EMNPLVISSILIKAECISQGASLLKRACLQGYEPDGKSLLSILDAYEKMGKHEKGLSLLE 628
Query: 156 RMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYK 215
++ P L + + L + K +A + + ++ D ++ +I +
Sbjct: 629 WIRQHVPNSHNLISECSIMLLCKNGKIVDAIQEYSRKQMLKRGSFGQDCDLYEYLITYLE 688
Query: 216 KAGGYEKARKLFALMAERGVQQSTVTYNSLM--SFETNYKEVS-KIYDQMQRAGLQPDVV 272
+A + +A ++F M G+ S + S + + E + ++ D R+ + +++
Sbjct: 689 EAELFPEACQVFCDMQFLGIVPSQKVFPSFIFQCCRLGFPETAYQLMDDAARSDISLNIL 748
Query: 273 SYAL-LINAYGKARREEEALAVFEEM-LDAGVRPTHKAYNILLDAFAISGMVDQARTVFK 330
S + +I AYGK + ++A + + ++GV + +N L+ A+A SG+ + AR +F
Sbjct: 749 SCRVAMIEAYGKLKLWQQAENFVKGLKQESGV--DRRIWNALIHAYAESGLYEHARAIFD 806
Query: 331 CMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVN 390
M + P + S M+ A + ++ + L+ + T +++ +AK
Sbjct: 807 IMIKKGPLPTVESVNGMMRALIVDGRLDELYVVVQELQDLDIKISKSTVLLMLEAFAKAG 866
Query: 391 NLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKN 450
++ ++M+IY+ M+ G PN ++ ++ NK F + EME GF PD N
Sbjct: 867 DVFEVMKIYNGMKAAGYLPNMHLYRIMISLLCHNKRFRDVELMVAEMEGAGFKPDLVVLN 926
Query: 451 ILL 453
LL
Sbjct: 927 TLL 929
>gi|224713522|gb|ACN62068.1| PPR-814b [Zea mays]
Length = 814
Score = 148 bits (373), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 92/355 (25%), Positives = 170/355 (47%), Gaps = 6/355 (1%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
++ A K +KAE L M KG P+ ++ L+ Y G++K A +F+ M+
Sbjct: 260 VVHALCKARAMDKAEAFLRQMVNKGVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHS 319
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
P +T +++ + K KEA +VF T+ + ++P + + +M+ Y G
Sbjct: 320 ILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNP---NVFSYTIMLNGYATKGCLV 376
Query: 222 KARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSK---IYDQMQRAGLQPDVVSYALLI 278
LF LM G+ T+N L+ N + K I+++M+ G++PDVV+Y +I
Sbjct: 377 DMTDLFDLMLGDGIAPDIYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVI 436
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCS 338
A + + ++A+ F +M+D GV P AY+ L+ F G + +A+ + + +
Sbjct: 437 AALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMH 496
Query: 339 PDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEI 398
DI ++++++ + A+ F G P + Y L+ GY V +EK + +
Sbjct: 497 LDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPTAVVYSMLMDGYCLVGKMEKALRV 556
Query: 399 YDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILL 453
+D M GI+PN ++ T+++ Y K D + ++EM G P NI++
Sbjct: 557 FDAMVSAGIEPNDVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIII 611
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 96/364 (26%), Positives = 171/364 (46%), Gaps = 8/364 (2%)
Query: 113 NKAEKVLSFMN---KKGYAPSVVSHTALMEAYGRGGRYKNA-EAIFRRMQSSGPRPSALT 168
++ E L+F + G +++ L++ + R A + + R G P +
Sbjct: 125 HRPELALAFFGQLLRTGLRVNIIIANHLLKGFCEAKRTDEALDILLHRTPELGCVPDVFS 184
Query: 169 YQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFA 228
Y I+LK + K +A+++ + ++ E + PD + +I + K G KA LF
Sbjct: 185 YSILLKSLCDQGKSGQADDL-LRMMAEGGAVCSPDVVAYSTVIDGFFKEGDVNKACDLFK 243
Query: 229 LMAERGVQQSTVTYNSLMSFETNYKEVSK---IYDQMQRAGLQPDVVSYALLINAYGKAR 285
M +RG+ VTY+S++ + + K QM G+ P+ +Y LI Y
Sbjct: 244 EMVQRGIPPDFVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPNNWTYNNLIYGYSSTG 303
Query: 286 REEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYT 345
+ +EA+ VF+EM + P ++L+ + G + +AR VF M +P++ SYT
Sbjct: 304 QWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPNVFSYT 363
Query: 346 TMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVN 405
ML+ Y + F + DG P++ T+ LIK YA L+K M I+++MR +
Sbjct: 364 IMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFNVLIKAYANCGMLDKAMIIFNEMRDH 423
Query: 406 GIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEA 465
G+KP+ + T++ A + D A+ + +M G PD+ A + L+ T +A
Sbjct: 424 GVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKA 483
Query: 466 NELL 469
EL+
Sbjct: 484 KELI 487
Score = 135 bits (340), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 95/441 (21%), Positives = 188/441 (42%), Gaps = 11/441 (2%)
Query: 44 AVAVLRSERTRGQPLPKDLVLGTLVRLKQLKKWNVVSEVLEWLRIQSW--WDFNEMDFLM 101
AV V + R R LP + L L + L K+ + E + + + N + +
Sbjct: 308 AVRVFKEMR-RHSILPDVVTLSML--MGSLCKYGKIKEARDVFDTMAMKGQNPNVFSYTI 364
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
++ Y +G + M G AP + + L++AY G A IF M+ G
Sbjct: 365 MLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFNVLIKAYANCGMLDKAMIIFNEMRDHG 424
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
+P +TY+ ++ K +A E F ++D+ + PD+ +H +I + G
Sbjct: 425 VKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQG---VAPDKYAYHCLIQGFCTHGSLL 481
Query: 222 KARKLFALMAERGVQQSTVTYNSLMSFETNYKEV---SKIYDQMQRAGLQPDVVSYALLI 278
KA++L + + G+ V ++S+++ V I+D GL P V Y++L+
Sbjct: 482 KAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPTAVVYSMLM 541
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCS 338
+ Y + E+AL VF+ M+ AG+ P Y L++ + G +D+ ++F+ M +
Sbjct: 542 DGYCLVGKMEKALRVFDAMVSAGIEPNDVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIK 601
Query: 339 PDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEI 398
P Y ++ A A+ F + + G N TY +++G K ++ + +
Sbjct: 602 PSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYNIVLRGLFKNRCFDEAIFL 661
Query: 399 YDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKT 458
+ ++R +K N T++ + + + A + + G P +I+++
Sbjct: 662 FKELRAMNVKINIITLNTMIAGMFQTRRVEEAKDLFASISRSGLVPCVVTYSIMITNLIK 721
Query: 459 ADERNEANELLGNFNHPNNEP 479
EA ++ + + EP
Sbjct: 722 EGLVEEAEDMFSSMQNAGCEP 742
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 88/326 (26%), Positives = 161/326 (49%), Gaps = 13/326 (3%)
Query: 128 APSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEE 187
+P+ ++ LM+ R R + A A F ++ +G R + + +LK F EA + EA +
Sbjct: 108 SPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLKGFCEAKRTDEALD 167
Query: 188 VFMTLLDEEKSP---LKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQS--TVTY 242
+ + ++P PD + +++ G +A L +MAE G S V Y
Sbjct: 168 ILL-----HRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPDVVAY 222
Query: 243 NSLM-SF--ETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLD 299
++++ F E + + ++ +M + G+ PD V+Y+ +++A KAR ++A A +M++
Sbjct: 223 STVIDGFFKEGDVNKACDLFKEMVQRGIPPDFVTYSSVVHALCKARAMDKAEAFLRQMVN 282
Query: 300 AGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEG 359
GV P + YN L+ ++ +G +A VFK MRR PD+ + + ++ + ++
Sbjct: 283 KGVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKE 342
Query: 360 AEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMD 419
A F + G PNV +Y ++ GYA L M +++D M +GI P+ F ++
Sbjct: 343 ARDVFDTMAMKGQNPNVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFNVLIK 402
Query: 420 AYGKNKDFDSAVVWYKEMESCGFPPD 445
AY D A++ + EM G PD
Sbjct: 403 AYANCGMLDKAMIIFNEMRDHGVKPD 428
Score = 131 bits (329), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 92/417 (22%), Positives = 179/417 (42%), Gaps = 7/417 (1%)
Query: 75 KWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSH 134
+W V + +R S + + ML+ + K G +A V M KG P+V S+
Sbjct: 304 QWKEAVRVFKEMRRHSILP-DVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPNVFSY 362
Query: 135 TALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLD 194
T ++ Y G + +F M G P T+ +++K + +A +F + D
Sbjct: 363 TIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFNVLIKAYANCGMLDKAMIIFNEMRD 422
Query: 195 EEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKE 254
+KPD + +I + G + A + F M ++GV Y+ L+ +
Sbjct: 423 HG---VKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGS 479
Query: 255 VSK---IYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNI 311
+ K + ++ G+ D+V ++ +IN K R +A +F+ ++ G+ PT Y++
Sbjct: 480 LLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPTAVVYSM 539
Query: 312 LLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDG 371
L+D + + G +++A VF M P+ Y T+++ Y ++ FR + Q G
Sbjct: 540 LMDGYCLVGKMEKALRVFDAMVSAGIEPNDVVYGTLVNGYCKIGRIDEGLSLFREMLQKG 599
Query: 372 FVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAV 431
P+ I Y +I G + + +M +GI N+ + ++ KN+ FD A+
Sbjct: 600 IKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYNIVLRGLFKNRCFDEAI 659
Query: 432 VWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGINGLSISV 488
+KE+ + + N +++ EA +L + + P + SI +
Sbjct: 660 FLFKELRAMNVKINIITLNTMIAGMFQTRRVEEAKDLFASISRSGLVPCVVTYSIMI 716
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 60/263 (22%), Positives = 117/263 (44%), Gaps = 6/263 (2%)
Query: 233 RGVQQSTVTYNSLMSFET--NYKEVS-KIYDQMQRAGLQPDVVSYALLINAYGKARREEE 289
R + ++ TY LM T + E++ + Q+ R GL+ +++ L+ + +A+R +E
Sbjct: 105 RVLSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLKGFCEAKRTDE 164
Query: 290 ALAVF-EEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRD--RCSPDICSYTT 346
AL + + G P +Y+ILL + G QA + + M CSPD+ +Y+T
Sbjct: 165 ALDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPDVVAYST 224
Query: 347 MLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNG 406
++ + D+ A F+ + Q G P+ +TY +++ K ++K +M G
Sbjct: 225 VIDGFFKEGDVNKACDLFKEMVQRGIPPDFVTYSSVVHALCKARAMDKAEAFLRQMVNKG 284
Query: 407 IKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEAN 466
+ PN + ++ Y + AV +KEM PD ++L+ + EA
Sbjct: 285 VLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEAR 344
Query: 467 ELLGNFNHPNNEPGINGLSISVD 489
++ P + +I ++
Sbjct: 345 DVFDTMAMKGQNPNVFSYTIMLN 367
>gi|79317869|ref|NP_001031033.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75178969|sp|Q9LPX2.1|PPR39_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g12775, mitochondrial; Flags: Precursor
gi|8698724|gb|AAF78482.1|AC012187_2 Contains similarity to an unknown protein F16M19.7 gi|6598837 from
Arabidopsis thaliana BAC F16M19 gb|AC010795 and contains
multiple PPR PF|01535 repeats. EST gb|AI999079 comes
from this gene [Arabidopsis thaliana]
gi|332190806|gb|AEE28927.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 644
Score = 148 bits (373), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 101/414 (24%), Positives = 195/414 (47%), Gaps = 6/414 (1%)
Query: 59 PKDLVLGTLVRLKQLKKWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKV 118
P + L TLV L + VL +++ + NE+ + ++ K G A ++
Sbjct: 191 PTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMEL 250
Query: 119 LSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVE 178
L M ++ V ++ +++ + G NA +F M+ G + +TY ++ F
Sbjct: 251 LRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCN 310
Query: 179 ANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQS 238
A ++ + ++ L D K + P+ F ++I + K G +A +L M +RG+ +
Sbjct: 311 AGRWDDGAKL---LRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPN 367
Query: 239 TVTYNSLM---SFETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFE 295
T+TYNSL+ E +E ++ D M G PD++++ +LIN Y KA R ++ L +F
Sbjct: 368 TITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFR 427
Query: 296 EMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNAS 355
EM GV YN L+ F SG ++ A+ +F+ M R PDI SY +L +
Sbjct: 428 EMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNG 487
Query: 356 DMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFT 415
++E A + F ++++ ++ Y +I G + ++ +++ + + G+K + +
Sbjct: 488 ELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYN 547
Query: 416 TIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELL 469
++ + A + +++M G PD+ NIL+ D+ A EL+
Sbjct: 548 IMISELCRKDSLSKADILFRKMTEEGHAPDELTYNILIRAHLGDDDATTAAELI 601
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 94/436 (21%), Positives = 193/436 (44%), Gaps = 41/436 (9%)
Query: 99 FLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQ 158
F L+ + ++A +++ M + G+ P++++ L+ G+ +A + RM
Sbjct: 161 FNTLLNGLCLECRVSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMV 220
Query: 159 SSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAG 218
+G +P+ +TY +L + ++ + A E+ + E+ +K D + ++I K G
Sbjct: 221 ETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKM---EERNIKLDAVKYSIIIDGLCKDG 277
Query: 219 GYEKARKLFALMAERGVQQSTVTYNSLMSFETN---YKEVSKIYDQMQRAGLQPDVVSYA 275
+ A LF M +G + +TYN+L+ N + + +K+ M + + P+VV+++
Sbjct: 278 SLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFS 337
Query: 276 LLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRD 335
+LI+++ K + EA + +EM+ G+ P YN L+D F +++A + M
Sbjct: 338 VLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISK 397
Query: 336 RCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLE-- 393
C PDI ++ +++ Y A+ ++ + FR + G + N +TY TL++G+ + LE
Sbjct: 398 GCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVA 457
Query: 394 ---------------------------------KMMEIYDKMRVNGIKPNQTIFTTIMDA 420
K +EI+ K+ + ++ + I+ I+
Sbjct: 458 KKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHG 517
Query: 421 YGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPG 480
D A + + G D +A NI++S D ++A+ L + P
Sbjct: 518 MCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADILFRKMTEEGHAPD 577
Query: 481 INGLSISVDEEDDDDD 496
+I + DDD
Sbjct: 578 ELTYNILIRAHLGDDD 593
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 83/343 (24%), Positives = 153/343 (44%), Gaps = 6/343 (1%)
Query: 129 PSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEV 188
P+V+ L A + +Y+ A+ ++M+S G S T I++ F K A
Sbjct: 86 PTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSIMINCFCRCRKLSYA--- 142
Query: 189 FMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSL--- 245
F T+ K +PD +F+ ++ +A +L M E G + + +T N+L
Sbjct: 143 FSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTLITLNTLVNG 202
Query: 246 MSFETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPT 305
+ + + D+M G QP+ V+Y ++N K+ + A+ + +M + ++
Sbjct: 203 LCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLD 262
Query: 306 HKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFR 365
Y+I++D G +D A +F M DI +Y T++ + NA + K R
Sbjct: 263 AVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLR 322
Query: 366 RLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNK 425
+ + PNV+T+ LI + K L + ++ +M GI PN + +++D + K
Sbjct: 323 DMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKEN 382
Query: 426 DFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANEL 468
+ A+ M S G PD NIL++ A+ ++ EL
Sbjct: 383 RLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLEL 425
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 82/369 (22%), Positives = 161/369 (43%), Gaps = 6/369 (1%)
Query: 88 IQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRY 147
IQS +DF L +A K + + M KG A S+ + + ++ + R +
Sbjct: 80 IQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSIMINCFCRCRKL 139
Query: 148 KNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMF 207
A + ++ G P + + +L + EA E+ +++ KP
Sbjct: 140 SYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGH---KPTLITL 196
Query: 208 HMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVS---KIYDQMQR 264
+ ++ G A L M E G Q + VTY +++ + + ++ +M+
Sbjct: 197 NTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEE 256
Query: 265 AGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQ 324
++ D V Y+++I+ K + A +F EM G + YN L+ F +G D
Sbjct: 257 RNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDD 316
Query: 325 ARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIK 384
+ + M + + SP++ +++ ++ ++V + A++ + + Q G PN ITY +LI
Sbjct: 317 GAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLID 376
Query: 385 GYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPP 444
G+ K N LE+ +++ D M G P+ F +++ Y K D + ++EM G
Sbjct: 377 GFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIA 436
Query: 445 DQKAKNILL 453
+ N L+
Sbjct: 437 NTVTYNTLV 445
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 79/385 (20%), Positives = 174/385 (45%), Gaps = 8/385 (2%)
Query: 101 MLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSS 160
++I + + + A + + K GY P V L+ R A + RM
Sbjct: 128 IMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEM 187
Query: 161 GPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEE-KSPLKPDQKMFHMMIYMYKKAGG 219
G +P+ +T ++ K +A + L+D ++ +P++ + ++ + K+G
Sbjct: 188 GHKPTLITLNTLVNGLCLNGKVSDA----VVLIDRMVETGFQPNEVTYGPVLNVMCKSGQ 243
Query: 220 YEKARKLFALMAERGVQQSTVTYNSL---MSFETNYKEVSKIYDQMQRAGLQPDVVSYAL 276
A +L M ER ++ V Y+ + + + + ++++M+ G + D+++Y
Sbjct: 244 TALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNT 303
Query: 277 LINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDR 336
LI + A R ++ + +M+ + P +++L+D+F G + +A + K M +
Sbjct: 304 LIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRG 363
Query: 337 CSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMM 396
+P+ +Y +++ + + +E A + + G P+++T+ LI GY K N ++ +
Sbjct: 364 IAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGL 423
Query: 397 EIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLA 456
E++ +M + G+ N + T++ + ++ + A ++EM S PD + ILL
Sbjct: 424 ELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGL 483
Query: 457 KTADERNEANELLGNFNHPNNEPGI 481
E +A E+ G E I
Sbjct: 484 CDNGELEKALEIFGKIEKSKMELDI 508
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 74/349 (21%), Positives = 140/349 (40%), Gaps = 6/349 (1%)
Query: 144 GGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPD 203
G + +A +FR M S P P+ + + +LF K K+ E V E +
Sbjct: 66 GIKADDAVDLFRDMIQSRPLPTVIDFN---RLFSAIAKTKQYELVLALCKQMESKGIAHS 122
Query: 204 QKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLM---SFETNYKEVSKIYD 260
+MI + + A + + G + TV +N+L+ E E ++ D
Sbjct: 123 IYTLSIMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVD 182
Query: 261 QMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISG 320
+M G +P +++ L+N + +A+ + + M++ G +P Y +L+ SG
Sbjct: 183 RMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSG 242
Query: 321 MVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYG 380
A + + M D Y+ ++ ++ A F ++ GF ++ITY
Sbjct: 243 QTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYN 302
Query: 381 TLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESC 440
TLI G+ + ++ M I PN F+ ++D++ K A KEM
Sbjct: 303 TLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQR 362
Query: 441 GFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGINGLSISVD 489
G P+ N L+ + EA +++ +P I +I ++
Sbjct: 363 GIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILIN 411
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 58/243 (23%), Positives = 118/243 (48%), Gaps = 7/243 (2%)
Query: 86 LRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGG 145
L I D + M F +LI Y K + ++ M+ +G + V++ L++ + + G
Sbjct: 393 LMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSG 452
Query: 146 RYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQK 205
+ + A+ +F+ M S RP ++Y+I+L + + ++A E+F + EKS ++ D
Sbjct: 453 KLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKI---EKSKMELDIG 509
Query: 206 MFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSK---IYDQM 262
++ ++I+ A + A LF + +GV+ YN ++S +SK ++ +M
Sbjct: 510 IYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADILFRKM 569
Query: 263 QRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMV 322
G PD ++Y +LI A+ A + EEM +G ++++ + SG +
Sbjct: 570 TEEGHAPDELTYNILIRAHLGDDDATTAAELIEEMKSSGFPADVSTVKMVINMLS-SGEL 628
Query: 323 DQA 325
D++
Sbjct: 629 DKS 631
>gi|410110093|gb|AFV61126.1| pentatricopeptide repeat-containing protein 123, partial [Lantana
microcephala]
Length = 440
Score = 148 bits (373), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 101/388 (26%), Positives = 187/388 (48%), Gaps = 37/388 (9%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
LI K D++KA + S + + G+ P +V++ A++ +G+ ++ A ++ M+++G
Sbjct: 56 LIELSRKLCDYSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLIGEMKAAG 115
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
P+ +Y +L ++VE KF EA VF + + E K L D ++MI +Y + G +
Sbjct: 116 VMPNTASYSTLLTMYVENKKFLEALSVF-SEMREIKCLL--DLTTCNIMIDVYGQLGMAK 172
Query: 222 KARKLFALMAERGVQQSTVTYNSLMSFETN---YKEVSKIYDQMQRAGLQPDVVSYALLI 278
+A KLF M + G++ + V+YN+L+ + + E ++ MQR ++ +VV+Y ++
Sbjct: 173 EADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMM 232
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCS 338
YGK E+A + +EM G+ P Y+ ++ + G +D+A +F+ +R
Sbjct: 233 MIYGKTLEHEKANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGIE 292
Query: 339 PDICSYTTMLSAY-------------------------------VNASDMEGAEKFFRRL 367
D + TM+ AY A +E A FR+
Sbjct: 293 IDQILFQTMIVAYERAGLVAHAKRLLHELKRPDNIPRDTAIHILAGAGRIEEATYVFRQA 352
Query: 368 KQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDF 427
G V ++ + +I +K ++E++DKMR G P+ + +++AYGK ++F
Sbjct: 353 IDAGEVKDITVFERMIHLLSKYKKYSNVVEVFDKMRGLGYFPDSDVIAIVLNAYGKLQEF 412
Query: 428 DSAVVWYKEMESCGFPPDQKAKNILLSL 455
D A Y EM+ G + +LSL
Sbjct: 413 DKANDVYMEMQEVGCVFSDEVHFQMLSL 440
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 88/327 (26%), Positives = 149/327 (45%), Gaps = 39/327 (11%)
Query: 192 LLDE-EKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFE- 249
L DE + L PD+ + +I + K G ++ A M + V V Y++L+
Sbjct: 2 LFDEMRQRALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSR 61
Query: 250 --TNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHK 307
+Y + I+ +++R+G PD+V+Y +IN +GKA+ EA ++ EM AGV P
Sbjct: 62 KLCDYSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLIGEMKAAGVMPNTA 121
Query: 308 AYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRL 367
+Y+ LL + + +A +VF MR +C D+ + M+ Y + A+K F +
Sbjct: 122 SYSTLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGM 181
Query: 368 KQDGFVPNVITYGTLIKGYAKV---------------NNLEK-------MMEIYDK---- 401
++ G PNV++Y TL++ Y N+E+ MM IY K
Sbjct: 182 RKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEH 241
Query: 402 ---------MRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNIL 452
M+ GI+PN ++TI+ +GK D A + ++++ S G DQ +
Sbjct: 242 EKANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGIEIDQILFQTM 301
Query: 453 LSLAKTADERNEANELLGNFNHPNNEP 479
+ + A A LL P+N P
Sbjct: 302 IVAYERAGLVAHAKRLLHELKRPDNIP 328
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 84/190 (44%)
Query: 292 AVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAY 351
+F+EM + P Y+ L+ F G+ D A + + M +DR D+ Y+ ++
Sbjct: 1 GLFDEMRQRALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELS 60
Query: 352 VNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQ 411
D A F RLK+ GF P+++ Y +I + K + + +M+ G+ PN
Sbjct: 61 RKLCDYSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLIGEMKAAGVMPNT 120
Query: 412 TIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGN 471
++T++ Y +NK F A+ + EM D NI++ + EA++L
Sbjct: 121 ASYSTLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWG 180
Query: 472 FNHPNNEPGI 481
EP +
Sbjct: 181 MRKMGIEPNV 190
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 59/244 (24%), Positives = 115/244 (47%), Gaps = 6/244 (2%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + + L+ YG F +A + M +K +VV++ ++M YG+ ++ A +
Sbjct: 189 NVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLI 248
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
+ MQS G P+++TY I+ ++ + K A +F L S ++ DQ +F MI Y
Sbjct: 249 QEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKL---RSSGIEIDQILFQTMIVAY 305
Query: 215 KKAGGYEKARKLFA-LMAERGVQQSTVTYNSLMSFETNYKEVSKIYDQMQRAGLQPDVVS 273
++AG A++L L + + T + +++ +E + ++ Q AG D+
Sbjct: 306 ERAGLVAHAKRLLHELKRPDNIPRDTAIH--ILAGAGRIEEATYVFRQAIDAGEVKDITV 363
Query: 274 YALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMR 333
+ +I+ K ++ + VF++M G P I+L+A+ D+A V+ M+
Sbjct: 364 FERMIHLLSKYKKYSNVVEVFDKMRGLGYFPDSDVIAIVLNAYGKLQEFDKANDVYMEMQ 423
Query: 334 RDRC 337
C
Sbjct: 424 EVGC 427
>gi|410110089|gb|AFV61124.1| pentatricopeptide repeat-containing protein 123, partial [Lantana
macropoda]
Length = 427
Score = 148 bits (373), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 99/374 (26%), Positives = 181/374 (48%), Gaps = 37/374 (9%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
LI K D++KA + S + K G+ P +V++ A++ +G+ ++ A ++ M+++G
Sbjct: 57 LIELSRKLCDYSKAISIFSRLKKSGFTPDLVAYNAMINVFGKAKLFREARSLIGEMKAAG 116
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
P+ +Y +L ++VE KF EA VF + + E K L D ++MI +Y + G +
Sbjct: 117 VMPNTXSYSTLLTMYVENKKFLEALSVF-SEMREIKCLL--DLTTCNIMIDVYGQLGMAK 173
Query: 222 KARKLFALMAERGVQQSTVTYNSLMSFETN---YKEVSKIYDQMQRAGLQPDVVSYALLI 278
+A KLF M + G++ + V+YN+L+ + + E ++ MQR ++ +VV+Y +
Sbjct: 174 EADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMX 233
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCS 338
YGK E+A + +EM G+ P Y+ ++ + G +D+A +F+ +R
Sbjct: 234 MIYGKTLEHEKANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGIE 293
Query: 339 PDICSYTTMLSAY-------------------------------VNASDMEGAEKFFRRL 367
D + TM+ AY A +E A FR+
Sbjct: 294 IDQILFQTMIVAYERAGLVAHAKRLLHELKRPDNIPRDTAIHILAGAGRIEEATYVFRQA 353
Query: 368 KQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDF 427
G V ++ + +I +K ++E++DKMR G P+ + +++AYGK ++F
Sbjct: 354 IDAGEVKDITVFERMIHLLSKYKKYSNVVEVFDKMRGLGYFPDSDVIAIVLNAYGKLQEF 413
Query: 428 DSAVVWYKEMESCG 441
D A Y EM+ G
Sbjct: 414 DKANDVYMEMQEVG 427
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 86/327 (26%), Positives = 149/327 (45%), Gaps = 39/327 (11%)
Query: 192 LLDE-EKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFE- 249
L DE + L PD+ + +I + K G ++ A M + V V Y++L+
Sbjct: 3 LFDEMRQRALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSR 62
Query: 250 --TNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHK 307
+Y + I+ +++++G PD+V+Y +IN +GKA+ EA ++ EM AGV P
Sbjct: 63 KLCDYSKAISIFSRLKKSGFTPDLVAYNAMINVFGKAKLFREARSLIGEMKAAGVMPNTX 122
Query: 308 AYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRL 367
+Y+ LL + + +A +VF MR +C D+ + M+ Y + A+K F +
Sbjct: 123 SYSTLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGM 182
Query: 368 KQDGFVPNVITYGTLIKGYA---------------KVNNLEK-------MMEIYDK---- 401
++ G PNV++Y TL++ Y + N+E+ M IY K
Sbjct: 183 RKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMXMIYGKTLEH 242
Query: 402 ---------MRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNIL 452
M+ GI+PN ++TI+ +GK D A + ++++ S G DQ +
Sbjct: 243 EKANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGIEIDQILFQTM 302
Query: 453 LSLAKTADERNEANELLGNFNHPNNEP 479
+ + A A LL P+N P
Sbjct: 303 IVAYERAGLVAHAKRLLHELKRPDNIP 329
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 84/190 (44%)
Query: 292 AVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAY 351
+F+EM + P Y+ L+ F G+ D A + + M +DR D+ Y+ ++
Sbjct: 2 GLFDEMRQRALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELS 61
Query: 352 VNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQ 411
D A F RLK+ GF P+++ Y +I + K + + +M+ G+ PN
Sbjct: 62 RKLCDYSKAISIFSRLKKSGFTPDLVAYNAMINVFGKAKLFREARSLIGEMKAAGVMPNT 121
Query: 412 TIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGN 471
++T++ Y +NK F A+ + EM D NI++ + EA++L
Sbjct: 122 XSYSTLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWG 181
Query: 472 FNHPNNEPGI 481
EP +
Sbjct: 182 MRKMGIEPNV 191
>gi|356562783|ref|XP_003549648.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74850,
chloroplastic-like [Glycine max]
Length = 859
Score = 148 bits (373), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 91/340 (26%), Positives = 165/340 (48%), Gaps = 8/340 (2%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
L+ +GK K ++L M G P + S+ L+EAY G K A +FR+MQ++G
Sbjct: 283 LVQTFGKLNRLEKVSELLREMESGGNLPDITSYNVLLEAYAELGSIKEAMDVFRQMQAAG 342
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
+A TY ++L L+ + ++ + ++F L+ + S PD ++++I ++ + G ++
Sbjct: 343 CVANAATYSVLLNLYGKHGRYDDVRDIF---LEMKVSNTDPDAGTYNILIQVFGEGGYFK 399
Query: 222 KARKLFALMAERGVQQSTVTYNSLMSFETN----YKEVSKIYDQMQRAGLQPDVVSYALL 277
+ LF M E V+ + TY L+ F Y++ KI M G+ P +Y +
Sbjct: 400 EVVTLFHDMVEENVEPNMETYEGLI-FACGKGGLYEDAKKILLHMNEKGIVPSSKAYTGV 458
Query: 278 INAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRC 337
I A+G+A EEAL VF M + G PT + YN + AFA G+ +A + M
Sbjct: 459 IEAFGQAALYEEALVVFNTMNEVGSNPTVETYNSFIHAFARGGLYKEAEAILSRMNESGL 518
Query: 338 SPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMME 397
D+ S+ ++ A+ E A K + +++ PN +T ++ Y +++ E
Sbjct: 519 KRDVHSFNGVIKAFRQGGQYEEAVKSYVEMEKANCEPNELTLEVVLSVYCSAGLVDESEE 578
Query: 398 IYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEM 437
+ +++ +GI P+ + ++ Y KN + A EM
Sbjct: 579 QFQEIKASGILPSVMCYCLMLALYAKNDRLNDAYNLIDEM 618
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 90/371 (24%), Positives = 177/371 (47%), Gaps = 6/371 (1%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
L+ A +G ++AE V MN+ G P + +++ L++ +G+ R + + R M+S G
Sbjct: 248 LLGACAHRGLGDEAEMVFRTMNESGIVPDINTYSYLVQTFGKLNRLEKVSELLREMESGG 307
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
P +Y ++L+ + E KEA +VF + + + + + +++ +Y K G Y+
Sbjct: 308 NLPDITSYNVLLEAYAELGSIKEAMDVFRQM---QAAGCVANAATYSVLLNLYGKHGRYD 364
Query: 222 KARKLFALMAERGVQQSTVTYNSLMSF--ETNY-KEVSKIYDQMQRAGLQPDVVSYALLI 278
R +F M TYN L+ E Y KEV ++ M ++P++ +Y LI
Sbjct: 365 DVRDIFLEMKVSNTDPDAGTYNILIQVFGEGGYFKEVVTLFHDMVEENVEPNMETYEGLI 424
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCS 338
A GK E+A + M + G+ P+ KAY +++AF + + ++A VF M +
Sbjct: 425 FACGKGGLYEDAKKILLHMNEKGIVPSSKAYTGVIEAFGQAALYEEALVVFNTMNEVGSN 484
Query: 339 PDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEI 398
P + +Y + + A+ + AE R+ + G +V ++ +IK + + E+ ++
Sbjct: 485 PTVETYNSFIHAFARGGLYKEAEAILSRMNESGLKRDVHSFNGVIKAFRQGGQYEEAVKS 544
Query: 399 YDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKT 458
Y +M +PN+ ++ Y D + ++E+++ G P ++L+L
Sbjct: 545 YVEMEKANCEPNELTLEVVLSVYCSAGLVDESEEQFQEIKASGILPSVMCYCLMLALYAK 604
Query: 459 ADERNEANELL 469
D N+A L+
Sbjct: 605 NDRLNDAYNLI 615
Score = 142 bits (358), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 97/401 (24%), Positives = 179/401 (44%), Gaps = 5/401 (1%)
Query: 76 WNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHT 135
W + ++++ Q W NE + ++IT G++G +K +V M G A +V +T
Sbjct: 116 WQRSLRLFKYMQRQIWCKPNEHIYTIMITLLGREGLLDKCREVFDEMPSNGVARTVYVYT 175
Query: 136 ALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDE 195
A++ AYGR G++ + + M+ PS LTY ++ + E + +
Sbjct: 176 AVINAYGRNGQFHASLELLNGMKQERVSPSILTYNTVINACARGGL--DWEGLLGLFAEM 233
Query: 196 EKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLM-SFE--TNY 252
++PD ++ ++ G ++A +F M E G+ TY+ L+ +F
Sbjct: 234 RHEGIQPDVITYNTLLGACAHRGLGDEAEMVFRTMNESGIVPDINTYSYLVQTFGKLNRL 293
Query: 253 KEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNIL 312
++VS++ +M+ G PD+ SY +L+ AY + +EA+ VF +M AG Y++L
Sbjct: 294 EKVSELLREMESGGNLPDITSYNVLLEAYAELGSIKEAMDVFRQMQAAGCVANAATYSVL 353
Query: 313 LDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGF 372
L+ + G D R +F M+ PD +Y ++ + + F + ++
Sbjct: 354 LNLYGKHGRYDDVRDIFLEMKVSNTDPDAGTYNILIQVFGEGGYFKEVVTLFHDMVEENV 413
Query: 373 VPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVV 432
PN+ TY LI K E +I M GI P+ +T +++A+G+ ++ A+V
Sbjct: 414 EPNMETYEGLIFACGKGGLYEDAKKILLHMNEKGIVPSSKAYTGVIEAFGQAALYEEALV 473
Query: 433 WYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFN 473
+ M G P + N + EA +L N
Sbjct: 474 VFNTMNEVGSNPTVETYNSFIHAFARGGLYKEAEAILSRMN 514
Score = 138 bits (348), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 95/394 (24%), Positives = 177/394 (44%), Gaps = 9/394 (2%)
Query: 99 FLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGR-YKNAEAIFRRM 157
+ +I AYG+ G F+ + ++L+ M ++ +PS++++ ++ A RGG ++ +F M
Sbjct: 174 YTAVINAYGRNGQFHASLELLNGMKQERVSPSILTYNTVINACARGGLDWEGLLGLFAEM 233
Query: 158 QSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKA 217
+ G +P +TY +L EAE VF T+ +S + PD + ++ + K
Sbjct: 234 RHEGIQPDVITYNTLLGACAHRGLGDEAEMVFRTM---NESGIVPDINTYSYLVQTFGKL 290
Query: 218 GGYEKARKLFALMAERGVQQSTVTYNSLMSFET---NYKEVSKIYDQMQRAGLQPDVVSY 274
EK +L M G +YN L+ + KE ++ QMQ AG + +Y
Sbjct: 291 NRLEKVSELLREMESGGNLPDITSYNVLLEAYAELGSIKEAMDVFRQMQAAGCVANAATY 350
Query: 275 ALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRR 334
++L+N YGK R ++ +F EM + P YNIL+ F G + T+F M
Sbjct: 351 SVLLNLYGKHGRYDDVRDIFLEMKVSNTDPDAGTYNILIQVFGEGGYFKEVVTLFHDMVE 410
Query: 335 DRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEK 394
+ P++ +Y ++ A E A+K + + G VP+ Y +I+ + + E+
Sbjct: 411 ENVEPNMETYEGLIFACGKGGLYEDAKKILLHMNEKGIVPSSKAYTGVIEAFGQAALYEE 470
Query: 395 MMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLS 454
+ +++ M G P + + + A+ + + A M G D + N ++
Sbjct: 471 ALVVFNTMNEVGSNPTVETYNSFIHAFARGGLYKEAEAILSRMNESGLKRDVHSFNGVIK 530
Query: 455 LAKTADERNEANELLGNFNHPNNEPGINGLSISV 488
+ + EA + N EP N L++ V
Sbjct: 531 AFRQGGQYEEAVKSYVEMEKANCEP--NELTLEV 562
Score = 128 bits (321), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 80/355 (22%), Positives = 172/355 (48%), Gaps = 20/355 (5%)
Query: 145 GRYK-NAEAIFRRMQSSGPRPSALT-------------YQIILKLFVEANKFKEAEEVFM 190
G+Y + E + R+ + PR S + ++ K F + ++ + +F
Sbjct: 65 GKYSYDVETLINRITALPPRGSIARCLDPFKNKLSLNDFALVFKEFAQRGDWQRSLRLFK 124
Query: 191 TLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLM-SFE 249
+ + + KP++ ++ +MI + + G +K R++F M GV ++ Y +++ ++
Sbjct: 125 YM--QRQIWCKPNEHIYTIMITLLGREGLLDKCREVFDEMPSNGVARTVYVYTAVINAYG 182
Query: 250 TN--YKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEAL-AVFEEMLDAGVRPTH 306
N + ++ + M++ + P +++Y +INA + + E L +F EM G++P
Sbjct: 183 RNGQFHASLELLNGMKQERVSPSILTYNTVINACARGGLDWEGLLGLFAEMRHEGIQPDV 242
Query: 307 KAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRR 366
YN LL A A G+ D+A VF+ M PDI +Y+ ++ + + +E + R
Sbjct: 243 ITYNTLLGACAHRGLGDEAEMVFRTMNESGIVPDINTYSYLVQTFGKLNRLEKVSELLRE 302
Query: 367 LKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKD 426
++ G +P++ +Y L++ YA++ ++++ M+++ +M+ G N ++ +++ YGK+
Sbjct: 303 MESGGNLPDITSYNVLLEAYAELGSIKEAMDVFRQMQAAGCVANAATYSVLLNLYGKHGR 362
Query: 427 FDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGI 481
+D + EM+ PD NIL+ + E L + N EP +
Sbjct: 363 YDDVRDIFLEMKVSNTDPDAGTYNILIQVFGEGGYFKEVVTLFHDMVEENVEPNM 417
Score = 108 bits (269), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 78/387 (20%), Positives = 162/387 (41%), Gaps = 43/387 (11%)
Query: 98 DFLMLITAYGKQGDFNKAEKVLSFMNKKGYA-PSVVSHTALMEAYGRGGRYKNAEAIFRR 156
DF ++ + ++GD+ ++ ++ +M ++ + P+ +T ++ GR G +F
Sbjct: 102 DFALVFKEFAQRGDWQRSLRLFKYMQRQIWCKPNEHIYTIMITLLGREGLLDKCREVFDE 161
Query: 157 MQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKK 216
M S+G + Y + I Y +
Sbjct: 162 MPSNGVARTVYVYTAV--------------------------------------INAYGR 183
Query: 217 AGGYEKARKLFALMAERGVQQSTVTYNSLMSFET----NYKEVSKIYDQMQRAGLQPDVV 272
G + + +L M + V S +TYN++++ +++ + ++ +M+ G+QPDV+
Sbjct: 184 NGQFHASLELLNGMKQERVSPSILTYNTVINACARGGLDWEGLLGLFAEMRHEGIQPDVI 243
Query: 273 SYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCM 332
+Y L+ A +EA VF M ++G+ P Y+ L+ F +++ + + M
Sbjct: 244 TYNTLLGACAHRGLGDEAEMVFRTMNESGIVPDINTYSYLVQTFGKLNRLEKVSELLREM 303
Query: 333 RRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNL 392
PDI SY +L AY ++ A FR+++ G V N TY L+ Y K
Sbjct: 304 ESGGNLPDITSYNVLLEAYAELGSIKEAMDVFRQMQAAGCVANAATYSVLLNLYGKHGRY 363
Query: 393 EKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNIL 452
+ + +I+ +M+V+ P+ + ++ +G+ F V + +M P+ + L
Sbjct: 364 DDVRDIFLEMKVSNTDPDAGTYNILIQVFGEGGYFKEVVTLFHDMVEENVEPNMETYEGL 423
Query: 453 LSLAKTADERNEANELLGNFNHPNNEP 479
+ +A ++L + N P
Sbjct: 424 IFACGKGGLYEDAKKILLHMNEKGIVP 450
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 74/286 (25%), Positives = 128/286 (44%), Gaps = 7/286 (2%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
LI A GK G + A+K+L MN+KG PS ++T ++EA+G+ Y+ A +F M G
Sbjct: 423 LIFACGKGGLYEDAKKILLHMNEKGIVPSSKAYTGVIEAFGQAALYEEALVVFNTMNEVG 482
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
P+ TY + F +KEAE + + +S LK D F+ +I +++ G YE
Sbjct: 483 SNPTVETYNSFIHAFARGGLYKEAEAILSRM---NESGLKRDVHSFNGVIKAFRQGGQYE 539
Query: 222 KARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSKIYDQMQR---AGLQPDVVSYALLI 278
+A K + M + + + +T ++S + V + +Q Q +G+ P V+ Y L++
Sbjct: 540 EAVKSYVEMEKANCEPNELTLEVVLSVYCSAGLVDESEEQFQEIKASGILPSVMCYCLML 599
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDA-FAISGMVDQARTVFKCMRRDRC 337
Y K R +A + +EM+ V H+ ++ F VF + + C
Sbjct: 600 ALYAKNDRLNDAYNLIDEMITMRVSDIHQGIGQMIKGDFDDESNWQIVEYVFDKLNSEGC 659
Query: 338 SPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLI 383
+ Y +L A E A + + G P + L+
Sbjct: 660 GLGMRFYNALLEALWWMFQRERAARVLNEASKRGLFPELFRKSKLV 705
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 47/218 (21%), Positives = 99/218 (45%), Gaps = 2/218 (0%)
Query: 274 YALLINAYGKARREEEALAVFEEM-LDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCM 332
+AL+ + + + +L +F+ M +P Y I++ G++D+ R VF M
Sbjct: 103 FALVFKEFAQRGDWQRSLRLFKYMQRQIWCKPNEHIYTIMITLLGREGLLDKCREVFDEM 162
Query: 333 RRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVN-N 391
+ + + YT +++AY + + +KQ+ P+++TY T+I A+ +
Sbjct: 163 PSNGVARTVYVYTAVINAYGRNGQFHASLELLNGMKQERVSPSILTYNTVINACARGGLD 222
Query: 392 LEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNI 451
E ++ ++ +MR GI+P+ + T++ A D A + ++ M G PD +
Sbjct: 223 WEGLLGLFAEMRHEGIQPDVITYNTLLGACAHRGLGDEAEMVFRTMNESGIVPDINTYSY 282
Query: 452 LLSLAKTADERNEANELLGNFNHPNNEPGINGLSISVD 489
L+ + + +ELL N P I ++ ++
Sbjct: 283 LVQTFGKLNRLEKVSELLREMESGGNLPDITSYNVLLE 320
>gi|410110123|gb|AFV61141.1| pentatricopeptide repeat-containing protein 123, partial [Lippia
macrophylla]
Length = 381
Score = 148 bits (373), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 98/374 (26%), Positives = 182/374 (48%), Gaps = 37/374 (9%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
LI K D++KA + S + + G+ P +V++ A++ +G+ ++ A ++ M+++G
Sbjct: 10 LIELSRKLCDYSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMKTAG 69
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
P+ +Y +L ++VE KF EA VF + + E K L D ++MI +Y + G +
Sbjct: 70 VMPNTTSYSTLLTMYVENKKFLEALSVF-SEMREIKCLL--DLTTCNIMIDVYGQLGMAK 126
Query: 222 KARKLFALMAERGVQQSTVTYNSLMSFETN---YKEVSKIYDQMQRAGLQPDVVSYALLI 278
+A KLF M + G++ + V+YN+L+ + + E ++ MQR ++ +VV+Y +I
Sbjct: 127 EADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMI 186
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCS 338
YGK E+A + +EM G+ P Y+ ++ + G +D+A +F+ +R
Sbjct: 187 MIYGKTLEHEKANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVE 246
Query: 339 PDICSYTTMLSAY-------------------------------VNASDMEGAEKFFRRL 367
D + TM+ AY A +E A FR+
Sbjct: 247 IDQILFQTMIVAYERAGLVAHAKRLLHELKRPDNIPRDTAIHILAGAGRIEEATYVFRQA 306
Query: 368 KQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDF 427
G V ++ + +I +K ++E+++KMR G P+ + +++AYGK ++F
Sbjct: 307 IDAGEVKDITVFERMIHLLSKXKKYSNVVEVFNKMRGLGYFPDSDVIAXVLNAYGKLQEF 366
Query: 428 DSAVVWYKEMESCG 441
D A Y EM+ G
Sbjct: 367 DKANDVYMEMQEVG 380
Score = 129 bits (323), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 77/280 (27%), Positives = 136/280 (48%), Gaps = 3/280 (1%)
Query: 203 DQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSF---ETNYKEVSKIY 259
D ++ +I + +K Y KA +F+ + G V YN++++ ++E +
Sbjct: 3 DLVLYSNLIELSRKLCDYSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLI 62
Query: 260 DQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAIS 319
+M+ AG+ P+ SY+ L+ Y + ++ EAL+VF EM + NI++D +
Sbjct: 63 SEMKTAGVMPNTTSYSTLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQL 122
Query: 320 GMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITY 379
GM +A +F MR+ P++ SY T+L Y +A A FR +++ NV+TY
Sbjct: 123 GMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTY 182
Query: 380 GTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMES 439
++I Y K EK + +M+ GI+PN ++TI+ +GK D A + ++++ S
Sbjct: 183 NSMIMIYGKTLEHEKANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRS 242
Query: 440 CGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEP 479
G DQ ++ + A A LL P+N P
Sbjct: 243 SGVEIDQILFQTMIVAYERAGLVAHAKRLLHELKRPDNIP 282
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 66/258 (25%), Positives = 133/258 (51%), Gaps = 6/258 (2%)
Query: 167 LTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKL 226
+ Y +++L + + +A +F L ++S PD ++ MI ++ KA + +AR L
Sbjct: 5 VLYSNLIELSRKLCDYSKAISIFSRL---KRSGFTPDLVAYNAMINVFGKAKLFREARSL 61
Query: 227 FALMAERGVQQSTVTYNSLMSFETNYK---EVSKIYDQMQRAGLQPDVVSYALLINAYGK 283
+ M GV +T +Y++L++ K E ++ +M+ D+ + ++I+ YG+
Sbjct: 62 ISEMKTAGVMPNTTSYSTLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQ 121
Query: 284 ARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICS 343
+EA +F M G+ P +YN LL + + + +A +F+ M+R ++ +
Sbjct: 122 LGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVT 181
Query: 344 YTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMR 403
Y +M+ Y + E A + ++ G PN ITY T+I + KV L++ ++ K+R
Sbjct: 182 YNSMIMIYGKTLEHEKANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLR 241
Query: 404 VNGIKPNQTIFTTIMDAY 421
+G++ +Q +F T++ AY
Sbjct: 242 SSGVEIDQILFQTMIVAY 259
Score = 65.5 bits (158), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 35/142 (24%), Positives = 63/142 (44%)
Query: 340 DICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIY 399
D+ Y+ ++ D A F RLK+ GF P+++ Y +I + K + +
Sbjct: 3 DLVLYSNLIELSRKLCDYSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLI 62
Query: 400 DKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTA 459
+M+ G+ PN T ++T++ Y +NK F A+ + EM D NI++ +
Sbjct: 63 SEMKTAGVMPNTTSYSTLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQL 122
Query: 460 DERNEANELLGNFNHPNNEPGI 481
EA++L EP +
Sbjct: 123 GMAKEADKLFWGMRKMGIEPNV 144
>gi|225456631|ref|XP_002266698.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74750
[Vitis vinifera]
Length = 875
Score = 148 bits (373), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 89/340 (26%), Positives = 165/340 (48%), Gaps = 6/340 (1%)
Query: 70 LKQLKKWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAP 129
LKQ++ V WL+ Q+ + + + ++ G+ F K+L+ M + G P
Sbjct: 353 LKQIQDHPVALGFFYWLKRQTGFKHDGHTYTTMVGILGRARQFGAINKLLAEMVRDGCQP 412
Query: 130 SVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVF 189
+VV++ L+ +YGR A ++F RMQ +G +P +TY ++ + +A A ++
Sbjct: 413 NVVTYNRLIHSYGRANYLNEAVSVFDRMQEAGCQPDRVTYCTLIDIHAKAGFLDVALHMY 472
Query: 190 MTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFE 249
+ +++ L PD + ++I KAG A KLF M ++G + VTYN +++ +
Sbjct: 473 QKM---QEAHLSPDTFTYSVIINCLGKAGHLTSAHKLFCEMVDQGCVPNLVTYNIMIALQ 529
Query: 250 T---NYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTH 306
NY ++Y MQ AG QPD V+Y++++ G EEA A+F EM P
Sbjct: 530 AKARNYPTALELYRDMQNAGFQPDKVTYSIVMEVLGHCGHLEEAEAIFTEMKRKNWVPDE 589
Query: 307 KAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRR 366
Y +L+D + G V+++ ++ M P++ + ++LSA++ + A +
Sbjct: 590 PVYGLLVDLWGKVGNVEKSWEWYQAMLNAGLCPNVPTCNSLLSAFLRVHRLSDAYNLLQS 649
Query: 367 LKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNG 406
+ + G P++ TY L+ + + M + M V G
Sbjct: 650 MLRLGLQPSLQTYTLLLSCCTEARSSFDMGFCGELMAVTG 689
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 74/278 (26%), Positives = 140/278 (50%), Gaps = 3/278 (1%)
Query: 195 EEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSF--ETNY 252
+ ++ K D + M+ + +A + KL A M G Q + VTYN L+ NY
Sbjct: 370 KRQTGFKHDGHTYTTMVGILGRARQFGAINKLLAEMVRDGCQPNVVTYNRLIHSYGRANY 429
Query: 253 -KEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNI 311
E ++D+MQ AG QPD V+Y LI+ + KA + AL ++++M +A + P Y++
Sbjct: 430 LNEAVSVFDRMQEAGCQPDRVTYCTLIDIHAKAGFLDVALHMYQKMQEAHLSPDTFTYSV 489
Query: 312 LLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDG 371
+++ +G + A +F M C P++ +Y M++ A + A + +R ++ G
Sbjct: 490 IINCLGKAGHLTSAHKLFCEMVDQGCVPNLVTYNIMIALQAKARNYPTALELYRDMQNAG 549
Query: 372 FVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAV 431
F P+ +TY +++ +LE+ I+ +M+ P++ ++ ++D +GK + + +
Sbjct: 550 FQPDKVTYSIVMEVLGHCGHLEEAEAIFTEMKRKNWVPDEPVYGLLVDLWGKVGNVEKSW 609
Query: 432 VWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELL 469
WY+ M + G P+ N LLS ++A LL
Sbjct: 610 EWYQAMLNAGLCPNVPTCNSLLSAFLRVHRLSDAYNLL 647
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 66/233 (28%), Positives = 121/233 (51%), Gaps = 3/233 (1%)
Query: 226 LFALMAERGVQQSTVTYNSLMSF---ETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYG 282
+ L + G + TY +++ + ++K+ +M R G QP+VV+Y LI++YG
Sbjct: 366 FYWLKRQTGFKHDGHTYTTMVGILGRARQFGAINKLLAEMVRDGCQPNVVTYNRLIHSYG 425
Query: 283 KARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDIC 342
+A EA++VF+ M +AG +P Y L+D A +G +D A +++ M+ SPD
Sbjct: 426 RANYLNEAVSVFDRMQEAGCQPDRVTYCTLIDIHAKAGFLDVALHMYQKMQEAHLSPDTF 485
Query: 343 SYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKM 402
+Y+ +++ A + A K F + G VPN++TY +I AK N +E+Y M
Sbjct: 486 TYSVIINCLGKAGHLTSAHKLFCEMVDQGCVPNLVTYNIMIALQAKARNYPTALELYRDM 545
Query: 403 RVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSL 455
+ G +P++ ++ +M+ G + A + EM+ + PD+ +L+ L
Sbjct: 546 QNAGFQPDKVTYSIVMEVLGHCGHLEEAEAIFTEMKRKNWVPDEPVYGLLVDL 598
Score = 125 bits (313), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 82/314 (26%), Positives = 148/314 (47%), Gaps = 9/314 (2%)
Query: 168 TYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLF 227
TY ++ + A +F ++ ++ + +P+ ++ +I+ Y +A +A +F
Sbjct: 381 TYTTMVGILGRARQFGAINKLLAEMV---RDGCQPNVVTYNRLIHSYGRANYLNEAVSVF 437
Query: 228 ALMAERGVQQSTVTYNSLMSF--ETNYKEVS-KIYDQMQRAGLQPDVVSYALLINAYGKA 284
M E G Q VTY +L+ + + +V+ +Y +MQ A L PD +Y+++IN GKA
Sbjct: 438 DRMQEAGCQPDRVTYCTLIDIHAKAGFLDVALHMYQKMQEAHLSPDTFTYSVIINCLGKA 497
Query: 285 RREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSY 344
A +F EM+D G P YNI++ A + A +++ M+ PD +Y
Sbjct: 498 GHLTSAHKLFCEMVDQGCVPNLVTYNIMIALQAKARNYPTALELYRDMQNAGFQPDKVTY 557
Query: 345 TTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRV 404
+ ++ + +E AE F +K+ +VP+ YG L+ + KV N+EK E Y M
Sbjct: 558 SIVMEVLGHCGHLEEAEAIFTEMKRKNWVPDEPVYGLLVDLWGKVGNVEKSWEWYQAMLN 617
Query: 405 NGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSL---AKTADE 461
G+ PN +++ A+ + A + M G P + +LLS A+++ +
Sbjct: 618 AGLCPNVPTCNSLLSAFLRVHRLSDAYNLLQSMLRLGLQPSLQTYTLLLSCCTEARSSFD 677
Query: 462 RNEANELLGNFNHP 475
EL+ HP
Sbjct: 678 MGFCGELMAVTGHP 691
>gi|255540825|ref|XP_002511477.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223550592|gb|EEF52079.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 754
Score = 148 bits (373), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 87/336 (25%), Positives = 167/336 (49%), Gaps = 11/336 (3%)
Query: 101 MLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSS 160
+L+ AY +GD A V M + P+ V+++ L+ YG GRY + +F M+ S
Sbjct: 323 VLLEAYASKGDIRHAMGVFRQMQEARCVPNAVTYSMLLNLYGGHGRYDDVRELFLEMKVS 382
Query: 161 GPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGY 220
P TY +++++F E FKE +F +++E ++P+ + +IY K G +
Sbjct: 383 NTEPDVGTYNVLIEVFGEGGYFKEVVTLFHDMVEEN---VEPNMGTYEGLIYACGKGGLH 439
Query: 221 EKARKLFALMAERGVQQSTVTYNSLMSF---ETNYKEVSKIYDQMQRAGLQPDVVSYALL 277
E A+K+ M E+G+ ST Y ++ +Y+E +++ M G +P V +Y L
Sbjct: 440 EDAKKILLHMDEKGIVPSTKAYTGVIEAYGQAASYEEALVMFNTMNEMGSKPTVETYNSL 499
Query: 278 INAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRC 337
IN + + +E+ A+ +M ++GV ++N +++ + G ++A + + + R
Sbjct: 500 INMFARGGLYKESEAIMWKMGESGVARDRDSFNGVIEGYRQGGQFEEAIKTYVELEKARF 559
Query: 338 SPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMME 397
PD ++ +LS Y A ++ +E+ FR ++ G +P+V+ Y +I YA+ N + E
Sbjct: 560 QPDERTFEAVLSVYCTAGLVDESEEQFREIRASGILPSVMCYCMMIAVYARSNRWDDAYE 619
Query: 398 IYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVW 433
+ D+M N + + +M D+D W
Sbjct: 620 VLDEMVTNKVSNIHQVVGKMMKG-----DYDDYSNW 650
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 97/384 (25%), Positives = 181/384 (47%), Gaps = 7/384 (1%)
Query: 76 WNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHT 135
W + ++++ Q W NE + ++I+ G++G K+ ++ M G SV S+T
Sbjct: 122 WQRSLRLFKYMQRQIWCKPNEHIYTIIISLLGREGLLEKSTEIFEEMPTHGVPRSVFSYT 181
Query: 136 ALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDE 195
AL+ +YGR G+Y+ + + RM+ PS LTY ++ E ++L E
Sbjct: 182 ALINSYGRHGQYEVSLELLERMKKEKVTPSILTYNTVINSCARGGLNWEG---LLSLFAE 238
Query: 196 EKSP-LKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLM-SFE--TN 251
+ ++PD ++ ++ G ++A +F M E G+ TY +L+ +F
Sbjct: 239 MRHEGIQPDIITYNTLLNACANRGLGDEAEMVFRTMNEGGMVPDITTYRNLVETFGKLNK 298
Query: 252 YKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNI 311
++VS++ +M+ +G PD+ SY +L+ AY A+ VF +M +A P Y++
Sbjct: 299 LEKVSELLKEMESSGNLPDISSYNVLLEAYASKGDIRHAMGVFRQMQEARCVPNAVTYSM 358
Query: 312 LLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDG 371
LL+ + G D R +F M+ PD+ +Y ++ + + F + ++
Sbjct: 359 LLNLYGGHGRYDDVRELFLEMKVSNTEPDVGTYNVLIEVFGEGGYFKEVVTLFHDMVEEN 418
Query: 372 FVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAV 431
PN+ TY LI K E +I M GI P+ +T +++AYG+ ++ A+
Sbjct: 419 VEPNMGTYEGLIYACGKGGLHEDAKKILLHMDEKGIVPSTKAYTGVIEAYGQAASYEEAL 478
Query: 432 VWYKEMESCGFPPDQKAKNILLSL 455
V + M G P + N L+++
Sbjct: 479 VMFNTMNEMGSKPTVETYNSLINM 502
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 87/332 (26%), Positives = 166/332 (50%), Gaps = 6/332 (1%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
L+ +GK K ++L M G P + S+ L+EAY G ++A +FR+MQ +
Sbjct: 289 LVETFGKLNKLEKVSELLKEMESSGNLPDISSYNVLLEAYASKGDIRHAMGVFRQMQEAR 348
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
P+A+TY ++L L+ ++ + E+F L+ + S +PD ++++I ++ + G ++
Sbjct: 349 CVPNAVTYSMLLNLYGGHGRYDDVRELF---LEMKVSNTEPDVGTYNVLIEVFGEGGYFK 405
Query: 222 KARKLFALMAERGVQQSTVTYNSLMSFETN---YKEVSKIYDQMQRAGLQPDVVSYALLI 278
+ LF M E V+ + TY L+ +++ KI M G+ P +Y +I
Sbjct: 406 EVVTLFHDMVEENVEPNMGTYEGLIYACGKGGLHEDAKKILLHMDEKGIVPSTKAYTGVI 465
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCS 338
AYG+A EEAL +F M + G +PT + YN L++ FA G+ ++ + M +
Sbjct: 466 EAYGQAASYEEALVMFNTMNEMGSKPTVETYNSLINMFARGGLYKESEAIMWKMGESGVA 525
Query: 339 PDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEI 398
D S+ ++ Y E A K + L++ F P+ T+ ++ Y +++ E
Sbjct: 526 RDRDSFNGVIEGYRQGGQFEEAIKTYVELEKARFQPDERTFEAVLSVYCTAGLVDESEEQ 585
Query: 399 YDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSA 430
+ ++R +GI P+ + ++ Y ++ +D A
Sbjct: 586 FREIRASGILPSVMCYCMMIAVYARSNRWDDA 617
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 100/409 (24%), Positives = 188/409 (45%), Gaps = 42/409 (10%)
Query: 98 DFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGG------------ 145
+ LI +YG+ G + + ++L M K+ PS++++ ++ + RGG
Sbjct: 179 SYTALINSYGRHGQYEVSLELLERMKKEKVTPSILTYNTVINSCARGGLNWEGLLSLFAE 238
Query: 146 -RYKN-----------------------AEAIFRRMQSSGPRPSALTYQIILKLFVEANK 181
R++ AE +FR M G P TY+ +++ F + NK
Sbjct: 239 MRHEGIQPDIITYNTLLNACANRGLGDEAEMVFRTMNEGGMVPDITTYRNLVETFGKLNK 298
Query: 182 FKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVT 241
++ E+ L + E S PD +++++ Y G A +F M E + VT
Sbjct: 299 LEKVSEL---LKEMESSGNLPDISSYNVLLEAYASKGDIRHAMGVFRQMQEARCVPNAVT 355
Query: 242 YNSLMSF---ETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEML 298
Y+ L++ Y +V +++ +M+ + +PDV +Y +LI +G+ +E + +F +M+
Sbjct: 356 YSMLLNLYGGHGRYDDVRELFLEMKVSNTEPDVGTYNVLIEVFGEGGYFKEVVTLFHDMV 415
Query: 299 DAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDME 358
+ V P Y L+ A G+ + A+ + M P +YT ++ AY A+ E
Sbjct: 416 EENVEPNMGTYEGLIYACGKGGLHEDAKKILLHMDEKGIVPSTKAYTGVIEAYGQAASYE 475
Query: 359 GAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIM 418
A F + + G P V TY +LI +A+ ++ I KM +G+ ++ F ++
Sbjct: 476 EALVMFNTMNEMGSKPTVETYNSLINMFARGGLYKESEAIMWKMGESGVARDRDSFNGVI 535
Query: 419 DAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANE 467
+ Y + F+ A+ Y E+E F PD++ +LS+ TA +E+ E
Sbjct: 536 EGYRQGGQFEEAIKTYVELEKARFQPDERTFEAVLSVYCTAGLVDESEE 584
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 80/371 (21%), Positives = 178/371 (47%), Gaps = 6/371 (1%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
L+ A +G ++AE V MN+ G P + ++ L+E +G+ + + + + M+SSG
Sbjct: 254 LLNACANRGLGDEAEMVFRTMNEGGMVPDITTYRNLVETFGKLNKLEKVSELLKEMESSG 313
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
P +Y ++L+ + + A VF + +++ P+ + M++ +Y G Y+
Sbjct: 314 NLPDISSYNVLLEAYASKGDIRHAMGVFRQM---QEARCVPNAVTYSMLLNLYGGHGRYD 370
Query: 222 KARKLFALMAERGVQQSTVTYNSLMSF--ETNY-KEVSKIYDQMQRAGLQPDVVSYALLI 278
R+LF M + TYN L+ E Y KEV ++ M ++P++ +Y LI
Sbjct: 371 DVRELFLEMKVSNTEPDVGTYNVLIEVFGEGGYFKEVVTLFHDMVEENVEPNMGTYEGLI 430
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCS 338
A GK E+A + M + G+ P+ KAY +++A+ + ++A +F M
Sbjct: 431 YACGKGGLHEDAKKILLHMDEKGIVPSTKAYTGVIEAYGQAASYEEALVMFNTMNEMGSK 490
Query: 339 PDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEI 398
P + +Y ++++ + + +E ++ + G + ++ +I+GY + E+ ++
Sbjct: 491 PTVETYNSLINMFARGGLYKESEAIMWKMGESGVARDRDSFNGVIEGYRQGGQFEEAIKT 550
Query: 399 YDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKT 458
Y ++ +P++ F ++ Y D + ++E+ + G P +++++
Sbjct: 551 YVELEKARFQPDERTFEAVLSVYCTAGLVDESEEQFREIRASGILPSVMCYCMMIAVYAR 610
Query: 459 ADERNEANELL 469
++ ++A E+L
Sbjct: 611 SNRWDDAYEVL 621
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 74/289 (25%), Positives = 148/289 (51%), Gaps = 7/289 (2%)
Query: 207 FHMMIYMYKKAGGYEKARKLFALMAERGV-----QQSTVTYNSLMSFETNYKEVSKIYDQ 261
F ++ + + G ++++ +LF M +R + + SL+ E ++ ++I+++
Sbjct: 109 FALVFKEFAQRGDWQRSLRLFKYM-QRQIWCKPNEHIYTIIISLLGREGLLEKSTEIFEE 167
Query: 262 MQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGM 321
M G+ V SY LIN+YG+ + E +L + E M V P+ YN ++++ A G+
Sbjct: 168 MPTHGVPRSVFSYTALINSYGRHGQYEVSLELLERMKKEKVTPSILTYNTVINSCARGGL 227
Query: 322 -VDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYG 380
+ ++F MR + PDI +Y T+L+A N + AE FR + + G VP++ TY
Sbjct: 228 NWEGLLSLFAEMRHEGIQPDIITYNTLLNACANRGLGDEAEMVFRTMNEGGMVPDITTYR 287
Query: 381 TLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESC 440
L++ + K+N LEK+ E+ +M +G P+ + + +++AY D A+ +++M+
Sbjct: 288 NLVETFGKLNKLEKVSELLKEMESSGNLPDISSYNVLLEAYASKGDIRHAMGVFRQMQEA 347
Query: 441 GFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGINGLSISVD 489
P+ ++LL+L ++ EL N EP + ++ ++
Sbjct: 348 RCVPNAVTYSMLLNLYGGHGRYDDVRELFLEMKVSNTEPDVGTYNVLIE 396
>gi|358346502|ref|XP_003637306.1| Pentatricopeptide repeat-containing protein, partial [Medicago
truncatula]
gi|355503241|gb|AES84444.1| Pentatricopeptide repeat-containing protein, partial [Medicago
truncatula]
Length = 603
Score = 148 bits (373), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 93/333 (27%), Positives = 167/333 (50%), Gaps = 7/333 (2%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N ++F +I K+G +A ++L M KG+ P+V +HT+L++ + G + A +F
Sbjct: 274 NLINFTCMIEGLCKRGSIKQAFEMLEEMVGKGWKPNVYTHTSLIDGLCKKGWTEKAFRLF 333
Query: 155 RRM-QSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYM 213
++ +S +P+ LTY ++ + +K AE M L ++ L P+ + +I
Sbjct: 334 LKLVRSENHKPNVLTYTAMISGYCREDKLNRAE---MLLSRMKEQGLVPNTNTYTTLIDG 390
Query: 214 YKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSKIYDQMQ---RAGLQPD 270
+ KAG +E+A L LM+ G + TYN++++ V + Y ++ + GL+PD
Sbjct: 391 HCKAGNFERAYDLMNLMSSEGFSPNLCTYNAIVNGLCKRGRVQEAYKMLEDGFQNGLKPD 450
Query: 271 VVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFK 330
+Y +L++ + K +ALA+F +ML G++P +Y L+ F + ++ F+
Sbjct: 451 KFTYNILMSEHCKQENIRQALALFNKMLKIGIQPDIHSYTTLIAVFCRENRMKESEMFFE 510
Query: 331 CMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVN 390
R P +YT+M+ Y ++ A KFF RL G P+ ITYG +I G K +
Sbjct: 511 EAVRIGIIPTNKTYTSMICGYCREGNLTLAMKFFHRLSDHGCAPDSITYGAIISGLCKQS 570
Query: 391 NLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGK 423
++ +YD M G+ P + T+ Y K
Sbjct: 571 KRDEARSLYDSMIEKGLVPCEVTRITLAYEYCK 603
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 92/328 (28%), Positives = 153/328 (46%), Gaps = 17/328 (5%)
Query: 136 ALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDE 195
++E++ GR K A + M + G P+ T I+K+ E + AE LL E
Sbjct: 140 CMVESFSEVGRLKEAVEMVIEMHNQGLVPNTRTLNWIIKVTSEMGLVEYAE-----LLFE 194
Query: 196 EKSP--LKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYK 253
E ++PD + +M+ MY K G +A K ++M ERG T+ ++S +
Sbjct: 195 EMCVRGVQPDSISYRVMVVMYCKIGNILEADKWLSVMLERGFVVDNATFTLIISRFSGKG 254
Query: 254 EVSKIYDQMQR---AGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYN 310
++ +R GL+P+++++ +I K ++A + EEM+ G +P +
Sbjct: 255 YTTRALWYFRRLVDMGLEPNLINFTCMIEGLCKRGSIKQAFEMLEEMVGKGWKPNVYTHT 314
Query: 311 ILLDAFAISGMVDQA-RTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQ 369
L+D G ++A R K +R + P++ +YT M+S Y + AE R+K+
Sbjct: 315 SLIDGLCKKGWTEKAFRLFLKLVRSENHKPNVLTYTAMISGYCREDKLNRAEMLLSRMKE 374
Query: 370 DGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDS 429
G VPN TY TLI G+ K N E+ ++ + M G PN + I++ K
Sbjct: 375 QGLVPNTNTYTTLIDGHCKAGNFERAYDLMNLMSSEGFSPNLCTYNAIVNGLCKRGRVQE 434
Query: 430 AVVWYKEME---SCGFPPDQKAKNILLS 454
A YK +E G PD+ NIL+S
Sbjct: 435 A---YKMLEDGFQNGLKPDKFTYNILMS 459
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 86/357 (24%), Positives = 162/357 (45%), Gaps = 5/357 (1%)
Query: 99 FLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQ 158
F ++I+ + +G +A + G P++++ T ++E + G K A + M
Sbjct: 243 FTLIISRFSGKGYTTRALWYFRRLVDMGLEPNLINFTCMIEGLCKRGSIKQAFEMLEEMV 302
Query: 159 SSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAG 218
G +P+ T+ ++ + ++A +F+ L+ E KP+ + MI Y +
Sbjct: 303 GKGWKPNVYTHTSLIDGLCKKGWTEKAFRLFLKLVRSENH--KPNVLTYTAMISGYCRED 360
Query: 219 GYEKARKLFALMAERGVQQSTVTYNSLMSFET---NYKEVSKIYDQMQRAGLQPDVVSYA 275
+A L + M E+G+ +T TY +L+ N++ + + M G P++ +Y
Sbjct: 361 KLNRAEMLLSRMKEQGLVPNTNTYTTLIDGHCKAGNFERAYDLMNLMSSEGFSPNLCTYN 420
Query: 276 LLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRD 335
++N K R +EA + E+ G++P YNIL+ + QA +F M +
Sbjct: 421 AIVNGLCKRGRVQEAYKMLEDGFQNGLKPDKFTYNILMSEHCKQENIRQALALFNKMLKI 480
Query: 336 RCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKM 395
PDI SYTT+++ + + M+ +E FF + G +P TY ++I GY + NL
Sbjct: 481 GIQPDIHSYTTLIAVFCRENRMKESEMFFEEAVRIGIIPTNKTYTSMICGYCREGNLTLA 540
Query: 396 MEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNIL 452
M+ + ++ +G P+ + I+ K D A Y M G P + + L
Sbjct: 541 MKFFHRLSDHGCAPDSITYGAIISGLCKQSKRDEARSLYDSMIEKGLVPCEVTRITL 597
Score = 105 bits (263), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 81/378 (21%), Positives = 170/378 (44%), Gaps = 7/378 (1%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
+ + + +++ Y K G+ +A+K LS M ++G+ + T ++ + G A F
Sbjct: 204 DSISYRVMVVMYCKIGNILEADKWLSVMLERGFVVDNATFTLIISRFSGKGYTTRALWYF 263
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
RR+ G P+ + + +++ + K+A E+ ++ + KP+ +I
Sbjct: 264 RRLVDMGLEPNLINFTCMIEGLCKRGSIKQAFEMLEEMVGK---GWKPNVYTHTSLIDGL 320
Query: 215 KKAGGYEKARKLFA-LMAERGVQQSTVTYNSLMS---FETNYKEVSKIYDQMQRAGLQPD 270
K G EKA +LF L+ + + +TY +++S E + +M+ GL P+
Sbjct: 321 CKKGWTEKAFRLFLKLVRSENHKPNVLTYTAMISGYCREDKLNRAEMLLSRMKEQGLVPN 380
Query: 271 VVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFK 330
+Y LI+ + KA E A + M G P YN +++ G V +A + +
Sbjct: 381 TNTYTTLIDGHCKAGNFERAYDLMNLMSSEGFSPNLCTYNAIVNGLCKRGRVQEAYKMLE 440
Query: 331 CMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVN 390
++ PD +Y ++S + ++ A F ++ + G P++ +Y TLI + + N
Sbjct: 441 DGFQNGLKPDKFTYNILMSEHCKQENIRQALALFNKMLKIGIQPDIHSYTTLIAVFCREN 500
Query: 391 NLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKN 450
+++ +++ GI P +T+++ Y + + A+ ++ + G PD
Sbjct: 501 RMKESEMFFEEAVRIGIIPTNKTYTSMICGYCREGNLTLAMKFFHRLSDHGCAPDSITYG 560
Query: 451 ILLSLAKTADERNEANEL 468
++S +R+EA L
Sbjct: 561 AIISGLCKQSKRDEARSL 578
>gi|334183628|ref|NP_001185309.1| tetratricopeptide repeat-like protein [Arabidopsis thaliana]
gi|193806276|sp|P0C7R3.1|PP106_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g64583, mitochondrial; Flags: Precursor
gi|332196135|gb|AEE34256.1| tetratricopeptide repeat-like protein [Arabidopsis thaliana]
Length = 512
Score = 148 bits (373), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 108/446 (24%), Positives = 206/446 (46%), Gaps = 12/446 (2%)
Query: 97 MDFLMLITAYGKQGDFNKAEKVLSFMNKK---GYAPSVVSHTALMEAYGRGGRYKNAEAI 153
+DF L+TA + + E V+ F K G + + S T L+ + R R A ++
Sbjct: 72 VDFTRLLTA---TANLRRYETVIYFSQKMELYGISHDLYSFTILIHCFCRCSRLSFALSV 128
Query: 154 FRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYM 213
+M G PS +T+ +L F N+ +A + + ++ KS +P+ +++ +I
Sbjct: 129 LGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMV---KSGYEPNVVVYNTLIDG 185
Query: 214 YKKAGGYEKARKLFALMAERGVQQSTVTYNSLMS---FETNYKEVSKIYDQMQRAGLQPD 270
K G A +L M ++G+ VTYN+L++ + + + +++ M + + PD
Sbjct: 186 LCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPD 245
Query: 271 VVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFK 330
VV++ LI+ + K +EA +++EM+ + V P + YN +++ + G + A+ F
Sbjct: 246 VVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFD 305
Query: 331 CMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVN 390
M C P++ +Y T++S + ++ K F+R+ +GF ++ TY TLI GY +V
Sbjct: 306 LMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVG 365
Query: 391 NLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKN 450
L ++I+ M + P+ ++ N + +SA+V + +M A N
Sbjct: 366 KLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKFDDMRESEKYIGIVAYN 425
Query: 451 ILLSLAKTADERNEANELLGNFNHPNNEPGINGLSISVDEEDDDDDDDEDDDDNIYHDGD 510
I++ AD+ +A EL +P +I + + E D+ +
Sbjct: 426 IMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRREADELIRRMKEE 485
Query: 511 GDGDGDDNEDDAEETIACSGKEDELI 536
G + EDD E + S KE L+
Sbjct: 486 GIICQMNAEDDHLEEHSSSNKEISLV 511
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 90/328 (27%), Positives = 156/328 (47%), Gaps = 6/328 (1%)
Query: 83 LEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYG 142
L L ++S ++ N + + LI K G+ N A ++L+ M KKG VV++ L+
Sbjct: 163 LVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLC 222
Query: 143 RGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKP 202
GR+ +A + R M P +T+ ++ +FV+ EA+E++ ++ +S + P
Sbjct: 223 YSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMI---QSSVDP 279
Query: 203 DQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVS---KIY 259
+ ++ +I G A+K F LMA +G + VTYN+L+S ++ V K++
Sbjct: 280 NNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLF 339
Query: 260 DQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAIS 319
+M G D+ +Y LI+ Y + + AL +F M+ V P + ILL ++
Sbjct: 340 QRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVN 399
Query: 320 GMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITY 379
G ++ A F MR I +Y M+ A +E A + F RL +G P+ TY
Sbjct: 400 GEIESALVKFDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTY 459
Query: 380 GTLIKGYAKVNNLEKMMEIYDKMRVNGI 407
+I G K + E+ +M+ GI
Sbjct: 460 TIMILGLCKNGPRREADELIRRMKEEGI 487
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/214 (23%), Positives = 97/214 (45%)
Query: 286 REEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYT 345
R E+A A+F EM+ + P+ + LL A A + + M S D+ S+T
Sbjct: 51 RFEDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYGISHDLYSFT 110
Query: 346 TMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVN 405
++ + S + A ++ + G+ P+++T+G+L+ G+ VN + + M +
Sbjct: 111 ILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKS 170
Query: 406 GIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEA 465
G +PN ++ T++D KN + + A+ EME G D N LL+ + ++A
Sbjct: 171 GYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDA 230
Query: 466 NELLGNFNHPNNEPGINGLSISVDEEDDDDDDDE 499
+L + + P + + +D + DE
Sbjct: 231 ARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDE 264
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 49/242 (20%), Positives = 99/242 (40%), Gaps = 7/242 (2%)
Query: 252 YKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNI 311
+++ ++ +M + P +V + L+ A RR E + ++M G+ ++ I
Sbjct: 52 FEDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYGISHDLYSFTI 111
Query: 312 LLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDG 371
L+ F + A +V M + P I ++ ++L + + + A + + G
Sbjct: 112 LIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSG 171
Query: 372 FVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAV 431
+ PNV+ Y TLI G K L +E+ ++M G+ + + T++ + + A
Sbjct: 172 YEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAA 231
Query: 432 VWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPG-------INGL 484
++M PD L+ + +EA EL + +P INGL
Sbjct: 232 RMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGL 291
Query: 485 SI 486
+
Sbjct: 292 CM 293
>gi|359482689|ref|XP_003632809.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g52620-like [Vitis vinifera]
Length = 879
Score = 148 bits (373), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 97/374 (25%), Positives = 175/374 (46%), Gaps = 41/374 (10%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
+I + K+GDF +++L MN +G +V + +++A + G A M G
Sbjct: 280 IINGFCKKGDFKAIDRLLMEMNSRGLTVNVQVYNTIIDARYKHGHIVKAVETIEGMIECG 339
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
+P +TY ++ K EA+++ L + L P++ + +I+ Y K GGY+
Sbjct: 340 CKPDIVTYNTLISGSCRDGKVSEADQLLEQALGK---GLMPNKFSYTPLIHAYCKQGGYD 396
Query: 222 KARKLFALMAERGVQQSTVTYNSLMSFETNYKEVS---KIYDQMQRAGLQPDVVSYALLI 278
+A M ERG + VTY +L+ EV I ++M G+ PD Y +L+
Sbjct: 397 RASNWLIEMTERGHKPDLVTYGALVHGLVVAGEVDVALTIREKMLERGVFPDAGIYNILM 456
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFK-------- 330
+ K + A + EMLD V P Y L+D F +G +D+AR +F+
Sbjct: 457 SGLCKKFKLPAAKLLLAEMLDQSVLPDAFVYATLVDGFIRNGNLDEARKLFELTIEKGMN 516
Query: 331 ------------------------C---MRRDRCSPDICSYTTMLSAYVNASDMEGAEKF 363
C M++ +PD +Y+T++ YV D++GA+K
Sbjct: 517 PGIVGYNAMIKGYCKFGMMKDAMACINRMKKRHLAPDEFTYSTVIDGYVKQHDLDGAQKM 576
Query: 364 FRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGK 423
FR + + PNV+TY +LI G+ + +L + ++I+ +M+ G+ PN ++ ++ ++ K
Sbjct: 577 FREMVKMKCKPNVVTYTSLINGFCRKGDLHRSLKIFREMQACGLVPNVVTYSILIGSFCK 636
Query: 424 NKDFDSAVVWYKEM 437
A +++EM
Sbjct: 637 EAKLIDAASFFEEM 650
Score = 135 bits (340), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 82/330 (24%), Positives = 151/330 (45%), Gaps = 35/330 (10%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N+ + LI AY KQG +++A L M ++G+ P +V++ AL+ G A I
Sbjct: 378 NKFSYTPLIHAYCKQGGYDRASNWLIEMTERGHKPDLVTYGALVHGLVVAGEVDVALTIR 437
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
+M G P A Y I++ + K A+ + +LD+ + PD ++ ++ +
Sbjct: 438 EKMLERGVFPDAGIYNILMSGLCKKFKLPAAKLLLAEMLDQS---VLPDAFVYATLVDGF 494
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSKIYDQMQRAGLQPDVVSY 274
+ G ++ARKLF L E+G + P +V Y
Sbjct: 495 IRNGNLDEARKLFELTIEKG--------------------------------MNPGIVGY 522
Query: 275 ALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRR 334
+I Y K ++A+A M + P Y+ ++D + +D A+ +F+ M +
Sbjct: 523 NAMIKGYCKFGMMKDAMACINRMKKRHLAPDEFTYSTVIDGYVKQHDLDGAQKMFREMVK 582
Query: 335 DRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEK 394
+C P++ +YT++++ + D+ + K FR ++ G VPNV+TY LI + K L
Sbjct: 583 MKCKPNVVTYTSLINGFCRKGDLHRSLKIFREMQACGLVPNVVTYSILIGSFCKEAKLID 642
Query: 395 MMEIYDKMRVNGIKPNQTIFTTIMDAYGKN 424
+++M +N PN F +++ + KN
Sbjct: 643 AASFFEEMLMNKCVPNDVTFNYLVNGFSKN 672
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 90/318 (28%), Positives = 142/318 (44%), Gaps = 39/318 (12%)
Query: 156 RMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYK 215
R Q SGP + Y +LKL + F E E V + EE SP + + ++I Y
Sbjct: 85 RGQYSGP-INGFAYSSLLKLLARSRVFSEMEVVLENMRVEEMSPTR---EAMSIVIQAYS 140
Query: 216 KAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSKIYDQMQRAGLQPDVVSYA 275
+G EKA +L+ + + T TY PDV++
Sbjct: 141 DSGLVEKALELYYFVLK------TYTYF-------------------------PDVIACN 169
Query: 276 LLINAYGKARREEEALAVFEEMLD---AGVRPT-HKAYNILLDAFAISGMVDQARTVFKC 331
L+N K R E A +++EML+ AG R + + I++ G +++ R + +
Sbjct: 170 SLLNMLVKLGRIEIARKLYDEMLEIDGAGDRCVDNYSTCIMVKGLCKEGKLEEGRKLIED 229
Query: 332 MRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNN 391
C P+I Y T++ Y DME A F LK GF+P V TYG +I G+ K +
Sbjct: 230 RWGQGCIPNIIFYNTLIDGYCKKGDMEMANGLFIELKLKGFLPTVETYGAIINGFCKKGD 289
Query: 392 LEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNI 451
+ + + +M G+ N ++ TI+DA K+ AV + M CG PD N
Sbjct: 290 FKAIDRLLMEMNSRGLTVNVQVYNTIIDARYKHGHIVKAVETIEGMIECGCKPDIVTYNT 349
Query: 452 LLSLAKTADERNEANELL 469
L+S + + +EA++LL
Sbjct: 350 LISGSCRDGKVSEADQLL 367
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 101/425 (23%), Positives = 181/425 (42%), Gaps = 15/425 (3%)
Query: 70 LKQLKKWNVVSE---VLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKK- 125
LK L + V SE VLE +R++ E ++I AY G KA ++ F+ K
Sbjct: 101 LKLLARSRVFSEMEVVLENMRVEEMSPTREA-MSIVIQAYSDSGLVEKALELYYFVLKTY 159
Query: 126 GYAPSVVSHTALMEAYGRGGRYKNAEAIFRRM---QSSGPRP-SALTYQIILKLFVEANK 181
Y P V++ +L+ + GR + A ++ M +G R + I++K + K
Sbjct: 160 TYFPDVIACNSLLNMLVKLGRIEIARKLYDEMLEIDGAGDRCVDNYSTCIMVKGLCKEGK 219
Query: 182 FKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVT 241
+E ++ + D P+ ++ +I Y K G E A LF + +G + T
Sbjct: 220 LEEGRKL---IEDRWGQGCIPNIIFYNTLIDGYCKKGDMEMANGLFIELKLKGFLPTVET 276
Query: 242 YNSLMSF---ETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEML 298
Y ++++ + ++K + ++ +M GL +V Y +I+A K +A+ E M+
Sbjct: 277 YGAIINGFCKKGDFKAIDRLLMEMNSRGLTVNVQVYNTIIDARYKHGHIVKAVETIEGMI 336
Query: 299 DAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDME 358
+ G +P YN L+ G V +A + + P+ SYT ++ AY +
Sbjct: 337 ECGCKPDIVTYNTLISGSCRDGKVSEADQLLEQALGKGLMPNKFSYTPLIHAYCKQGGYD 396
Query: 359 GAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIM 418
A + + + G P+++TYG L+ G ++ + I +KM G+ P+ I+ +M
Sbjct: 397 RASNWLIEMTERGHKPDLVTYGALVHGLVVAGEVDVALTIREKMLERGVFPDAGIYNILM 456
Query: 419 DAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNE 478
K +A + EM PD L+ +EA +L
Sbjct: 457 SGLCKKFKLPAAKLLLAEMLDQSVLPDAFVYATLVDGFIRNGNLDEARKLFELTIEKGMN 516
Query: 479 PGING 483
PGI G
Sbjct: 517 PGIVG 521
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/281 (23%), Positives = 122/281 (43%), Gaps = 24/281 (8%)
Query: 99 FLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQ 158
+ L+ + + G+ ++A K+ +KG P +V + A+++ Y + G K+A A RM+
Sbjct: 487 YATLVDGFIRNGNLDEARKLFELTIEKGMNPGIVGYNAMIKGYCKFGMMKDAMACINRMK 546
Query: 159 SSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAG 218
P TY ++ +V+ + A+++F ++ K KP+ + +I + + G
Sbjct: 547 KRHLAPDEFTYSTVIDGYVKQHDLDGAQKMFREMV---KMKCKPNVVTYTSLINGFCRKG 603
Query: 219 GYEKARKLFALMAERGVQQSTVTYNSLM-SF--ETNYKEVSKIYDQMQRAGLQPDVVSYA 275
++ K+F M G+ + VTY+ L+ SF E + + +++M P+ V++
Sbjct: 604 DLHRSLKIFREMQACGLVPNVVTYSILIGSFCKEAKLIDAASFFEEMLMNKCVPNDVTFN 663
Query: 276 LLINAYGK--------------ARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGM 321
L+N + K ++ L F M+ G P AYN +L GM
Sbjct: 664 YLVNGFSKNGTRAISEKGNEFQENKQSMFLNFFGRMISDGWAPRSAAYNSILICLCQYGM 723
Query: 322 VDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEK 362
A + M C PD S+ +L +EG K
Sbjct: 724 FRTALQLSNKMTSKGCIPDSVSFVALLHGVC----LEGRSK 760
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 93/212 (43%), Gaps = 20/212 (9%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
+E + +I Y KQ D + A+K+ M K P+VV++T+L+ + R G + IF
Sbjct: 553 DEFTYSTVIDGYVKQHDLDGAQKMFREMVKMKCKPNVVTYTSLINGFCRKGDLHRSLKIF 612
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
R MQ+ G P+ +TY I++ F + K +A F +L + P+ F+ ++ +
Sbjct: 613 REMQACGLVPNVVTYSILIGSFCKEAKLIDAASFFEEML---MNKCVPNDVTFNYLVNGF 669
Query: 215 KKAGGYEKARK--------------LFALMAERGVQQSTVTYNSLMSFETNY---KEVSK 257
K G + K F M G + YNS++ Y + +
Sbjct: 670 SKNGTRAISEKGNEFQENKQSMFLNFFGRMISDGWAPRSAAYNSILICLCQYGMFRTALQ 729
Query: 258 IYDQMQRAGLQPDVVSYALLINAYGKARREEE 289
+ ++M G PD VS+ L++ R +E
Sbjct: 730 LSNKMTSKGCIPDSVSFVALLHGVCLEGRSKE 761
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/239 (21%), Positives = 102/239 (42%), Gaps = 42/239 (17%)
Query: 257 KIYDQMQRAGLQPDV--VSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLD 314
K +D + R + +Y+ L+ ++R E V E M + PT +A +I++
Sbjct: 78 KFFDWVSRGQYSGPINGFAYSSLLKLLARSRVFSEMEVVLENMRVEEMSPTREAMSIVIQ 137
Query: 315 AFAISGMVDQARTVFK-CMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFF--------- 364
A++ SG+V++A ++ ++ PD+ + ++L+ V +E A K +
Sbjct: 138 AYSDSGLVEKALELYYFVLKTYTYFPDVIACNSLLNMLVKLGRIEIARKLYDEMLEIDGA 197
Query: 365 --------------------------RRLKQD----GFVPNVITYGTLIKGYAKVNNLEK 394
R+L +D G +PN+I Y TLI GY K ++E
Sbjct: 198 GDRCVDNYSTCIMVKGLCKEGKLEEGRKLIEDRWGQGCIPNIIFYNTLIDGYCKKGDMEM 257
Query: 395 MMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILL 453
++ ++++ G P + I++ + K DF + EM S G + + N ++
Sbjct: 258 ANGLFIELKLKGFLPTVETYGAIINGFCKKGDFKAIDRLLMEMNSRGLTVNVQVYNTII 316
>gi|326527027|dbj|BAK04455.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 860
Score = 148 bits (373), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 88/317 (27%), Positives = 162/317 (51%), Gaps = 9/317 (2%)
Query: 114 KAEKVLSFMNKKGYA--PSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQI 171
+A + M K+G A P+VV++ ++ + + G A ++F M G +P +TY +
Sbjct: 246 RALDLFQMMAKEGGACSPNVVAYNTVIHGFFKEGETGKACSLFHEMTRQGVKPDVVTYNL 305
Query: 172 ILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMA 231
I+ +A +AE + L + +PD ++ MI+ Y G ++A K+F M
Sbjct: 306 IIDALCKARAMDKAE---LVLRQMTTNGAQPDTVTYNCMIHGYATLGRLKEAAKMFRKMK 362
Query: 232 ERGVQQSTVTYNSLMSFETNY---KEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREE 288
RG+ + V NS ++ + KE ++I+D M G +PD+VSY L++ Y
Sbjct: 363 SRGLIPNIVICNSFLASLCKHGRSKEAAEIFDSMTAKGHKPDIVSYCTLLHGYASEGWFA 422
Query: 289 EALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTML 348
+ + +F M G+ + +NIL+ A+A GMVD A +F M++ SPD+ +Y+T++
Sbjct: 423 DMIGLFNSMKSNGIAADCRVFNILIHAYAKRGMVDDAMLIFTEMQQQGVSPDVVTYSTVI 482
Query: 349 SAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGI- 407
SA+ + A + F ++ G PN Y ++I+G+ L K E+ +M GI
Sbjct: 483 SAFSRMGRLTDAMEKFNQMVARGIQPNTAVYHSIIQGFCMHGGLVKAKELVSEMINKGIP 542
Query: 408 KPNQTIFTTIMDAYGKN 424
+P+ F +++++ K+
Sbjct: 543 RPDIVFFNSVINSLCKD 559
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 94/415 (22%), Positives = 188/415 (45%), Gaps = 40/415 (9%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + + +I + K+G+ KA + M ++G P VV++ +++A + AE +
Sbjct: 264 NVVAYNTVIHGFFKEGETGKACSLFHEMTRQGVKPDVVTYNLIIDALCKARAMDKAELVL 323
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSP--------------- 199
R+M ++G +P +TY ++ + + KEA ++F + P
Sbjct: 324 RQMTTNGAQPDTVTYNCMIHGYATLGRLKEAAKMFRKMKSRGLIPNIVICNSFLASLCKH 383
Query: 200 -----------------LKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTY 242
KPD + +++ Y G + LF M G+ +
Sbjct: 384 GRSKEAAEIFDSMTAKGHKPDIVSYCTLLHGYASEGWFADMIGLFNSMKSNGIAADCRVF 443
Query: 243 NSLMSFETNYKEVSK---IYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLD 299
N L+ V I+ +MQ+ G+ PDVV+Y+ +I+A+ + R +A+ F +M+
Sbjct: 444 NILIHAYAKRGMVDDAMLIFTEMQQQGVSPDVVTYSTVISAFSRMGRLTDAMEKFNQMVA 503
Query: 300 AGVRPTHKAYNILLDAFAI-SGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDME 358
G++P Y+ ++ F + G+V V + + + PDI + +++++ +
Sbjct: 504 RGIQPNTAVYHSIIQGFCMHGGLVKAKELVSEMINKGIPRPDIVFFNSVINSLCKDGRVM 563
Query: 359 GAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIM 418
A F + G P+VIT+ +LI GY V ++K +I D M V G++ + ++T++
Sbjct: 564 DAHDIFDLVTDIGERPDVITFTSLIDGYCLVGKMDKAFKILDAMEVVGVETDIVTYSTLL 623
Query: 419 DAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLS----LAKTADERNEANELL 469
D Y KN + + ++EM+ G P+ I+L+ +T R + +E++
Sbjct: 624 DGYFKNGRINDGLTLFREMQRKGVKPNTVTYGIMLAGLFRAGRTVAARKKFHEMI 678
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 87/357 (24%), Positives = 170/357 (47%), Gaps = 11/357 (3%)
Query: 130 SVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVF 189
+V +++ LM+ R R +F + +G + +T +LK AN+ +EA V
Sbjct: 156 TVHTYSILMDCCCRARRPDLGLVLFGCILRTGLKIHQITASTLLKCLCYANRTEEAVNVL 215
Query: 190 MTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERG--VQQSTVTYNSLMS 247
+ + E P+ + +++ ++A LF +MA+ G + V YN+++
Sbjct: 216 LHRMSELGC--VPNVFSYSIILKGLCDNSMSQRALDLFQMMAKEGGACSPNVVAYNTVIH 273
Query: 248 F---ETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRP 304
E + ++ +M R G++PDVV+Y L+I+A KAR ++A V +M G +P
Sbjct: 274 GFFKEGETGKACSLFHEMTRQGVKPDVVTYNLIIDALCKARAMDKAELVLRQMTTNGAQP 333
Query: 305 THKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFF 364
YN ++ +A G + +A +F+ M+ P+I + L++ + A + F
Sbjct: 334 DTVTYNCMIHGYATLGRLKEAAKMFRKMKSRGLIPNIVICNSFLASLCKHGRSKEAAEIF 393
Query: 365 RRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKN 424
+ G P++++Y TL+ GYA M+ +++ M+ NGI + +F ++ AY K
Sbjct: 394 DSMTAKGHKPDIVSYCTLLHGYASEGWFADMIGLFNSMKSNGIAADCRVFNILIHAYAKR 453
Query: 425 KDFDSAVVWYKEMESCGFPPDQKAKNILLS----LAKTADERNEANELLGNFNHPNN 477
D A++ + EM+ G PD + ++S + + D + N+++ PN
Sbjct: 454 GMVDDAMLIFTEMQQQGVSPDVVTYSTVISAFSRMGRLTDAMEKFNQMVARGIQPNT 510
Score = 129 bits (323), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 81/382 (21%), Positives = 168/382 (43%), Gaps = 7/382 (1%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
+ + K G +A ++ M KG+ P +VS+ L+ Y G + + +F M+S+G
Sbjct: 376 FLASLCKHGRSKEAAEIFDSMTAKGHKPDIVSYCTLLHGYASEGWFADMIGLFNSMKSNG 435
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
+ I++ + + +A +F + ++ + PD + +I + + G
Sbjct: 436 IAADCRVFNILIHAYAKRGMVDDAMLIFTEM---QQQGVSPDVVTYSTVISAFSRMGRLT 492
Query: 222 KARKLFALMAERGVQQSTVTYNSLM---SFETNYKEVSKIYDQMQRAGL-QPDVVSYALL 277
A + F M RG+Q +T Y+S++ + ++ +M G+ +PD+V + +
Sbjct: 493 DAMEKFNQMVARGIQPNTAVYHSIIQGFCMHGGLVKAKELVSEMINKGIPRPDIVFFNSV 552
Query: 278 INAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRC 337
IN+ K R +A +F+ + D G RP + L+D + + G +D+A + M
Sbjct: 553 INSLCKDGRVMDAHDIFDLVTDIGERPDVITFTSLIDGYCLVGKMDKAFKILDAMEVVGV 612
Query: 338 SPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMME 397
DI +Y+T+L Y + FR +++ G PN +TYG ++ G + +
Sbjct: 613 ETDIVTYSTLLDGYFKNGRINDGLTLFREMQRKGVKPNTVTYGIMLAGLFRAGRTVAARK 672
Query: 398 IYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAK 457
+ +M +G +I+ I+ +N D A++ ++++ + N +++
Sbjct: 673 KFHEMIESGTTVTVSIYGIILGGLCRNNCADEAIILFQKLGTMNVKFSITILNTMINAMY 732
Query: 458 TADERNEANELLGNFNHPNNEP 479
+ EA EL + P
Sbjct: 733 KVQRKEEAKELFATISASGLLP 754
Score = 128 bits (321), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 87/389 (22%), Positives = 172/389 (44%), Gaps = 9/389 (2%)
Query: 97 MDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRR 156
+ + L+ Y +G F + + M G A L+ AY + G +A IF
Sbjct: 406 VSYCTLLHGYASEGWFADMIGLFNSMKSNGIAADCRVFNILIHAYAKRGMVDDAMLIFTE 465
Query: 157 MQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKK 216
MQ G P +TY ++ F + +A E F ++ ++P+ ++H +I +
Sbjct: 466 MQQQGVSPDVVTYSTVISAFSRMGRLTDAMEKFNQMVARG---IQPNTAVYHSIIQGFCM 522
Query: 217 AGGYEKARKLFALMAERGVQQSTVTY-----NSLMSFETNYKEVSKIYDQMQRAGLQPDV 271
GG KA++L + M +G+ + + + NSL + + I+D + G +PDV
Sbjct: 523 HGGLVKAKELVSEMINKGIPRPDIVFFNSVINSLCK-DGRVMDAHDIFDLVTDIGERPDV 581
Query: 272 VSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKC 331
+++ LI+ Y + ++A + + M GV Y+ LLD + +G ++ T+F+
Sbjct: 582 ITFTSLIDGYCLVGKMDKAFKILDAMEVVGVETDIVTYSTLLDGYFKNGRINDGLTLFRE 641
Query: 332 MRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNN 391
M+R P+ +Y ML+ A A K F + + G V YG ++ G + N
Sbjct: 642 MQRKGVKPNTVTYGIMLAGLFRAGRTVAARKKFHEMIESGTTVTVSIYGIILGGLCRNNC 701
Query: 392 LEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNI 451
++ + ++ K+ +K + TI T+++A K + + A + + + G P++ +
Sbjct: 702 ADEAIILFQKLGTMNVKFSITILNTMINAMYKVQRKEEAKELFATISASGLLPNESTYGV 761
Query: 452 LLSLAKTADERNEANELLGNFNHPNNEPG 480
++ +AN + + PG
Sbjct: 762 MIINLLKDGAVEDANNMFSSMEKSGIVPG 790
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 87/358 (24%), Positives = 157/358 (43%), Gaps = 40/358 (11%)
Query: 99 FLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQ 158
F +LI AY K+G + A + + M ++G +P VV+++ ++ A+ R GR +A F +M
Sbjct: 443 FNILIHAYAKRGMVDDAMLIFTEMQQQGVSPDVVTYSTVISAFSRMGRLTDAMEKFNQMV 502
Query: 159 SSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAG 218
+ G +P+ Y I++ F +A+E+ +++ K +PD F+ +I K G
Sbjct: 503 ARGIQPNTAVYHSIIQGFCMHGGLVKAKELVSEMIN--KGIPRPDIVFFNSVINSLCKDG 560
Query: 219 GYEKARKLFALMAERGVQQSTVTYNSLM----------------------SFETNYKEVS 256
A +F L+ + G + +T+ SL+ ET+ S
Sbjct: 561 RVMDAHDIFDLVTDIGERPDVITFTSLIDGYCLVGKMDKAFKILDAMEVVGVETDIVTYS 620
Query: 257 KIYD----------------QMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDA 300
+ D +MQR G++P+ V+Y +++ +A R A F EM+++
Sbjct: 621 TLLDGYFKNGRINDGLTLFREMQRKGVKPNTVTYGIMLAGLFRAGRTVAARKKFHEMIES 680
Query: 301 GVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGA 360
G T Y I+L + D+A +F+ + I TM++A E A
Sbjct: 681 GTTVTVSIYGIILGGLCRNNCADEAIILFQKLGTMNVKFSITILNTMINAMYKVQRKEEA 740
Query: 361 EKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIM 418
++ F + G +PN TYG +I K +E ++ M +GI P + I+
Sbjct: 741 KELFATISASGLLPNESTYGVMIINLLKDGAVEDANNMFSSMEKSGIVPGSRLLNRII 798
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 52/227 (22%), Positives = 102/227 (44%), Gaps = 3/227 (1%)
Query: 258 IYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVF-EEMLDAGVRPTHKAYNILLDAF 316
++ + R GL+ ++ + L+ A R EEA+ V M + G P +Y+I+L
Sbjct: 179 LFGCILRTGLKIHQITASTLLKCLCYANRTEEAVNVLLHRMSELGCVPNVFSYSIILKGL 238
Query: 317 AISGMVDQARTVFKCMRRD--RCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVP 374
+ M +A +F+ M ++ CSP++ +Y T++ + + A F + + G P
Sbjct: 239 CDNSMSQRALDLFQMMAKEGGACSPNVVAYNTVIHGFFKEGETGKACSLFHEMTRQGVKP 298
Query: 375 NVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWY 434
+V+TY +I K ++K + +M NG +P+ + ++ Y A +
Sbjct: 299 DVVTYNLIIDALCKARAMDKAELVLRQMTTNGAQPDTVTYNCMIHGYATLGRLKEAAKMF 358
Query: 435 KEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGI 481
++M+S G P+ N L+ EA E+ + ++P I
Sbjct: 359 RKMKSRGLIPNIVICNSFLASLCKHGRSKEAAEIFDSMTAKGHKPDI 405
>gi|449499490|ref|XP_004160831.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
mitochondrial-like [Cucumis sativus]
Length = 1000
Score = 148 bits (373), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 98/395 (24%), Positives = 182/395 (46%), Gaps = 27/395 (6%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + F + +GK F KA KV+ M G+ P +++ ++ R +NA +F
Sbjct: 456 NVVSFARCLCGFGK---FEKAYKVIHEMMGNGFVPDTSTYSEVIGFLCNASRVENAFFLF 512
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDE-EKSPLKPDQKMFHMMIYM 213
+ M+ +G P TY I++ F +A K+A LDE + +P + +I+
Sbjct: 513 KEMKGTGVVPDVYTYTILIDCFSKAGIIKQAH----NWLDEMVRDGCEPTVVTYTTLIHA 568
Query: 214 YKKAGGYEKARKLFALMAERGVQQSTVTYNSLM---SFETNYKEVSKIYDQMQ------- 263
Y KA A +LF LM +G + +TY +L+ N ++ +IY +M+
Sbjct: 569 YLKAKKVSVANELFELMIAKGCFPNVITYTALIDGYCKSGNIEKACQIYARMRGDADIPD 628
Query: 264 ---------RAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLD 314
+P+VV+Y L++ KA + ++A + E M G P Y+ L+D
Sbjct: 629 VDMYFKIKNNVAEKPNVVTYGALVDGLCKAHKVKDARDLLETMFVDGCEPNTIVYDALID 688
Query: 315 AFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVP 374
F + +D+A+ VF M +P++ +Y++++ ++ K ++ ++ P
Sbjct: 689 GFCKAAKLDEAQEVFHKMVERGYNPNVYTYSSLIDRLFKDKRLDLVLKVLSKMLENSCAP 748
Query: 375 NVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWY 434
N++ Y +I G +KV ++ ++ M G KPN +T ++D +GK D + +
Sbjct: 749 NIVIYTEMIDGLSKVAKTDEAYKLMLMMEEKGCKPNVVTYTAMIDGFGKAGKVDKCLELF 808
Query: 435 KEMESCGFPPDQKAKNILLSLAKTADERNEANELL 469
+EM S G P+ +L++ +EA LL
Sbjct: 809 REMGSKGCAPNFVTYTVLINHCCATGHLDEAYALL 843
Score = 136 bits (342), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 107/445 (24%), Positives = 180/445 (40%), Gaps = 66/445 (14%)
Query: 105 AYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRP 164
A K G + +A LS + K+ + P+ + + ++ ++ A RM+S+ P
Sbjct: 285 ALCKVGKWREA---LSLIEKEDFVPNTILYNKMISGLCEASFFEEAMDFLNRMRSTSCIP 341
Query: 165 SALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKAR 224
+ TY+I+L + + + + ++ E P +F+ +++ Y K+ + A
Sbjct: 342 NVQTYRILLCGCLNKKQLGRCKRILSMMIAEG---CYPSYTIFNSLVHAYCKSDDFSYAY 398
Query: 225 KLFALMAERGVQQSTVTYNSLM-------------SFET--------------------- 250
KL M + + V YN L+ +FE
Sbjct: 399 KLLKKMEKCECKPGYVVYNILIGSICSGGELPGPVTFELAEKAYNEMLSAGTVLNKVNVV 458
Query: 251 ----------NYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDA 300
+++ K+ +M G PD +Y+ +I A R E A +F+EM
Sbjct: 459 SFARCLCGFGKFEKAYKVIHEMMGNGFVPDTSTYSEVIGFLCNASRVENAFFLFKEMKGT 518
Query: 301 GVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGA 360
GV P Y IL+D F+ +G++ QA M RD C P + +YTT++ AY+ A + A
Sbjct: 519 GVVPDVYTYTILIDCFSKAGIIKQAHNWLDEMVRDGCEPTVVTYTTLIHAYLKAKKVSVA 578
Query: 361 EKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMR--------------VNG 406
+ F + G PNVITY LI GY K N+EK +IY +MR N
Sbjct: 579 NELFELMIAKGCFPNVITYTALIDGYCKSGNIEKACQIYARMRGDADIPDVDMYFKIKNN 638
Query: 407 I--KPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNE 464
+ KPN + ++D K A + M G P+ + L+ A + +E
Sbjct: 639 VAEKPNVVTYGALVDGLCKAHKVKDARDLLETMFVDGCEPNTIVYDALIDGFCKAAKLDE 698
Query: 465 ANELLGNFNHPNNEPGINGLSISVD 489
A E+ P + S +D
Sbjct: 699 AQEVFHKMVERGYNPNVYTYSSLID 723
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 80/371 (21%), Positives = 166/371 (44%), Gaps = 18/371 (4%)
Query: 99 FLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQ 158
+ +LI + K G +A L M + G P+VV++T L+ AY + + A +F M
Sbjct: 527 YTILIDCFSKAGIIKQAHNWLDEMVRDGCEPTVVTYTTLIHAYLKAKKVSVANELFELMI 586
Query: 159 SSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSP-------------LKPDQK 205
+ G P+ +TY ++ + ++ ++A +++ + + P KP+
Sbjct: 587 AKGCFPNVITYTALIDGYCKSGNIEKACQIYARMRGDADIPDVDMYFKIKNNVAEKPNVV 646
Query: 206 MFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLM---SFETNYKEVSKIYDQM 262
+ ++ KA + AR L M G + +T+ Y++L+ E +++ +M
Sbjct: 647 TYGALVDGLCKAHKVKDARDLLETMFVDGCEPNTIVYDALIDGFCKAAKLDEAQEVFHKM 706
Query: 263 QRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMV 322
G P+V +Y+ LI+ K +R + L V +ML+ P Y ++D +
Sbjct: 707 VERGYNPNVYTYSSLIDRLFKDKRLDLVLKVLSKMLENSCAPNIVIYTEMIDGLSKVAKT 766
Query: 323 DQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTL 382
D+A + M C P++ +YT M+ + A ++ + FR + G PN +TY L
Sbjct: 767 DEAYKLMLMMEEKGCKPNVVTYTAMIDGFGKAGKVDKCLELFREMGSKGCAPNFVTYTVL 826
Query: 383 IKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGF 442
I +L++ + ++M+ + + + +++ Y ++F ++ +E+E G
Sbjct: 827 INHCCATGHLDEAYALLEEMKQTYWPKHVSSYCKVIEGY--KREFILSLGLLEEVEKNGS 884
Query: 443 PPDQKAKNILL 453
P +L+
Sbjct: 885 APTILLYKVLI 895
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 95/439 (21%), Positives = 178/439 (40%), Gaps = 88/439 (20%)
Query: 51 ERTRGQPLPKDLVLGTLVR-LKQLKKWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQ 109
E R P + TL+ + KK +V +E+ E + + + N + + LI Y K
Sbjct: 549 EMVRDGCEPTVVTYTTLIHAYLKAKKVSVANELFELMIAKGCFP-NVITYTALIDGYCKS 607
Query: 110 GDFNKAEKVLSFM----------------NKKGYAPSVVSHTALMEAYGRGGRYKNAEAI 153
G+ KA ++ + M N P+VV++ AL++ + + K+A +
Sbjct: 608 GNIEKACQIYARMRGDADIPDVDMYFKIKNNVAEKPNVVTYGALVDGLCKAHKVKDARDL 667
Query: 154 FRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSP-------------- 199
M G P+ + Y ++ F +A K EA+EVF +++ +P
Sbjct: 668 LETMFVDGCEPNTIVYDALIDGFCKAAKLDEAQEVFHKMVERGYNPNVYTYSSLIDRLFK 727
Query: 200 ------------------LKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVT 241
P+ ++ MI K ++A KL +M E+G + + VT
Sbjct: 728 DKRLDLVLKVLSKMLENSCAPNIVIYTEMIDGLSKVAKTDEAYKLMLMMEEKGCKPNVVT 787
Query: 242 YNSLMSFETNYKEVSK---IYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEML 298
Y +++ +V K ++ +M G P+ V+Y +LIN +EA A+ EEM
Sbjct: 788 YTAMIDGFGKAGKVDKCLELFREMGSKGCAPNFVTYTVLINHCCATGHLDEAYALLEEMK 847
Query: 299 DA---------------------------------GVRPTHKAYNILLDAFAISGMVDQA 325
G PT Y +L+D F +G ++ A
Sbjct: 848 QTYWPKHVSSYCKVIEGYKREFILSLGLLEEVEKNGSAPTILLYKVLIDNFVKAGRLEVA 907
Query: 326 RTVFKCMRRDRCSPDICS--YTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLI 383
+ K + S YT+++ ++ AS ++ A + F + +DG +P++ T+ L+
Sbjct: 908 LELHKEVISASMSMTAKKNLYTSLIYSFSYASKIDHAFELFYDMIRDGVIPDLGTFVHLL 967
Query: 384 KGYAKVNNLEKMMEIYDKM 402
G +V E+ +++ D +
Sbjct: 968 MGLIRVRRWEEALQLSDSL 986
Score = 78.6 bits (192), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 83/193 (43%), Gaps = 3/193 (1%)
Query: 261 QMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISG 320
+++ G +P ++Y L+ + +A + + A V EM + G+ A G
Sbjct: 231 RLKDFGYKPTRMTYNALVQVFLRADKLDTAQLVHREMSELGLSMDEFTLGFFAQALCKVG 290
Query: 321 MVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYG 380
+ R + ++ P+ Y M+S AS E A F R++ +PNV TY
Sbjct: 291 ---KWREALSLIEKEDFVPNTILYNKMISGLCEASFFEEAMDFLNRMRSTSCIPNVQTYR 347
Query: 381 TLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESC 440
L+ G L + I M G P+ TIF +++ AY K+ DF A K+ME C
Sbjct: 348 ILLCGCLNKKQLGRCKRILSMMIAEGCYPSYTIFNSLVHAYCKSDDFSYAYKLLKKMEKC 407
Query: 441 GFPPDQKAKNILL 453
P NIL+
Sbjct: 408 ECKPGYVVYNILI 420
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 70/397 (17%), Positives = 141/397 (35%), Gaps = 44/397 (11%)
Query: 126 GYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEA 185
GY + + AL++ + RG + E R ++ ++++ + A
Sbjct: 166 GYDHTPAVYIALLDVFERGSYDRVPEEFLREIRGDDKEVLGKLLNVLIRKCCRNGLWNVA 225
Query: 186 EEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSL 245
E L D KP + ++ ++ ++ +A + A+ + M+E G+ T
Sbjct: 226 LEELGRLKD---FGYKPTRMTYNALVQVFLRADKLDTAQLVHREMSELGLSMDEFTLGFF 282
Query: 246 MSFETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPT 305
+ + +++ P+ + Y +I+ +A EEA+ M P
Sbjct: 283 AQALCKVGKWREALSLIEKEDFVPNTILYNKMISGLCEASFFEEAMDFLNRMRSTSCIPN 342
Query: 306 HKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFR 365
+ Y ILL + + + + M + C P + +++ AY + D A K +
Sbjct: 343 VQTYRILLCGCLNKKQLGRCKRILSMMIAEGCYPSYTIFNSLVHAYCKSDDFSYAYKLLK 402
Query: 366 RLKQDGFVPNVITYGTLI-------------------KGY----------AKVN------ 390
++++ P + Y LI K Y KVN
Sbjct: 403 KMEKCECKPGYVVYNILIGSICSGGELPGPVTFELAEKAYNEMLSAGTVLNKVNVVSFAR 462
Query: 391 ------NLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPP 444
EK ++ +M NG P+ + ++ ++ ++A +KEM+ G P
Sbjct: 463 CLCGFGKFEKAYKVIHEMMGNGFVPDTSTYSEVIGFLCNASRVENAFFLFKEMKGTGVVP 522
Query: 445 DQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGI 481
D IL+ A +A+ L EP +
Sbjct: 523 DVYTYTILIDCFSKAGIIKQAHNWLDEMVRDGCEPTV 559
>gi|225432035|ref|XP_002273694.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g48810-like [Vitis vinifera]
Length = 666
Score = 148 bits (373), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 99/411 (24%), Positives = 191/411 (46%), Gaps = 15/411 (3%)
Query: 46 AVLRSERTRGQPLPKDLVLGTLVRLKQLKKWNVVSEVLEWLRIQSWWDFNEMDFLMLITA 105
++ S+ + PL +++ L +++ + V +L+ ++++ +E F+ +I +
Sbjct: 65 SIANSKSFKHTPLTYQMMIEKLASEREM---DCVQYLLQQMKLEGI-SCSEDLFISVIGS 120
Query: 106 YGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPS 165
Y + G +A K M P+V + +++A R++ I+ M+ G P+
Sbjct: 121 YRRAGSSEQALKTFYRMQDFRVKPTVKIYNHILDALLDENRFQMINPIYSNMKKDGMEPN 180
Query: 166 ALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARK 225
TY I+LK + N+ A ++ L++ PD+ + +I K G ++AR+
Sbjct: 181 VFTYNILLKALCKNNRVDGAHKL---LVEMSSKGCDPDEVSYTTLISSLCKLGKVKEARE 237
Query: 226 LFALMAERGVQQSTVTYNSLMSF---ETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYG 282
L S YN+L++ E ++E ++ D+M G+ P+V+SY +INA
Sbjct: 238 L-----AMSFTPSVPVYNALINGVCKEYTFEEAFQLLDEMMNKGIDPNVISYTTIINALS 292
Query: 283 KARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDIC 342
A E +LAV +M G P + L+ F + G +A + M R+ P++
Sbjct: 293 DAGNVELSLAVLAKMFARGCSPNLHTFTSLIKGFFLKGGSHEALDFWDRMIREGVVPNVV 352
Query: 343 SYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKM 402
+Y ++ + + A F +++ +G PNV TY LI GYAK +L+ E+++ M
Sbjct: 353 AYNALMHGLCSKRSLGDAVSVFNQMEINGCCPNVRTYSALIDGYAKAGDLDGASEVWNWM 412
Query: 403 RVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILL 453
+G PN +T ++D +N F+ A + M+ PP+ N +
Sbjct: 413 ITHGCHPNVVAYTCMVDVLCRNSMFNQAYCLIENMQVENCPPNTVTFNTFI 463
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 103/408 (25%), Positives = 178/408 (43%), Gaps = 30/408 (7%)
Query: 112 FNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQI 171
F + S M K G P+V ++ L++A + R A + M S G P ++Y
Sbjct: 162 FQMINPIYSNMKKDGMEPNVFTYNILLKALCKNNRVDGAHKLLVEMSSKGCDPDEVSYTT 221
Query: 172 ILKLFVEANKFKEAEEVFMT--------------------------LLDEEKSP-LKPDQ 204
++ + K KEA E+ M+ LLDE + + P+
Sbjct: 222 LISSLCKLGKVKEARELAMSFTPSVPVYNALINGVCKEYTFEEAFQLLDEMMNKGIDPNV 281
Query: 205 KMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMS---FETNYKEVSKIYDQ 261
+ +I AG E + + A M RG + T+ SL+ + E +D+
Sbjct: 282 ISYTTIINALSDAGNVELSLAVLAKMFARGCSPNLHTFTSLIKGFFLKGGSHEALDFWDR 341
Query: 262 MQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGM 321
M R G+ P+VV+Y L++ R +A++VF +M G P + Y+ L+D +A +G
Sbjct: 342 MIREGVVPNVVAYNALMHGLCSKRSLGDAVSVFNQMEINGCCPNVRTYSALIDGYAKAGD 401
Query: 322 VDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGT 381
+D A V+ M C P++ +YT M+ S A ++ + PN +T+ T
Sbjct: 402 LDGASEVWNWMITHGCHPNVVAYTCMVDVLCRNSMFNQAYCLIENMQVENCPPNTVTFNT 461
Query: 382 LIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCG 441
IKG ++ ++++D+M +G PN T + ++D+ K++ F A K+ME G
Sbjct: 462 FIKGLCGSGRVDWAIKVFDQMGNSGCFPNTTTYNELLDSLLKDRRFGEAFGLVKDMEHRG 521
Query: 442 FPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGINGLSISVD 489
+ N ++ A EA ELLG +P ++I +D
Sbjct: 522 IELNLVTYNTIIYGYCCAGMLGEALELLGKMVVRGTKPDAITVNIVID 569
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 99/414 (23%), Positives = 197/414 (47%), Gaps = 10/414 (2%)
Query: 70 LKQLKKWNVVSEVLEWLR-IQSWWDFNE--MDFLMLITAYGKQGDFNKAEKVLSFMNKKG 126
LK+LK + ++ LE+ + I + F + + M+I + + + + +L M +G
Sbjct: 47 LKRLKHEHDITLALEYFKSIANSKSFKHTPLTYQMMIEKLASEREMDCVQYLLQQMKLEG 106
Query: 127 YAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAE 186
+ S +++ +Y R G + A F RMQ +P+ Y IL ++ N+F+
Sbjct: 107 ISCSEDLFISVIGSYRRAGSSEQALKTFYRMQDFRVKPTVKIYNHILDALLDENRFQMIN 166
Query: 187 EVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLM 246
++ + +K ++P+ +++++ K + A KL M+ +G V+Y +L+
Sbjct: 167 PIYSNM---KKDGMEPNVFTYNILLKALCKNNRVDGAHKLLVEMSSKGCDPDEVSYTTLI 223
Query: 247 SFETNYKEVSKIYDQMQRA-GLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPT 305
S + ++ K+ + + A P V Y LIN K EEA + +EM++ G+ P
Sbjct: 224 S---SLCKLGKVKEARELAMSFTPSVPVYNALINGVCKEYTFEEAFQLLDEMMNKGIDPN 280
Query: 306 HKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFR 365
+Y +++A + +G V+ + V M CSP++ ++T+++ + A F+
Sbjct: 281 VISYTTIINALSDAGNVELSLAVLAKMFARGCSPNLHTFTSLIKGFFLKGGSHEALDFWD 340
Query: 366 RLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNK 425
R+ ++G VPNV+ Y L+ G +L + ++++M +NG PN ++ ++D Y K
Sbjct: 341 RMIREGVVPNVVAYNALMHGLCSKRSLGDAVSVFNQMEINGCCPNVRTYSALIDGYAKAG 400
Query: 426 DFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEP 479
D D A + M + G P+ A ++ + N+A L+ N N P
Sbjct: 401 DLDGASEVWNWMITHGCHPNVVAYTCMVDVLCRNSMFNQAYCLIENMQVENCPP 454
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 91/400 (22%), Positives = 168/400 (42%), Gaps = 46/400 (11%)
Query: 93 DFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEA 152
D +E+ + LI++ K G +A ++ + PSV + AL+ + ++ A
Sbjct: 213 DPDEVSYTTLISSLCKLGKVKEAREL-----AMSFTPSVPVYNALINGVCKEYTFEEAFQ 267
Query: 153 IFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIY 212
+ M + G P+ ++Y I+ +A + + V + SP + F +I
Sbjct: 268 LLDEMMNKGIDPNVISYTTIINALSDAGNVELSLAVLAKMFARGCSP---NLHTFTSLIK 324
Query: 213 MYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVS---KIYDQMQRAGLQP 269
+ GG +A + M GV + V YN+LM + + + +++QM+ G P
Sbjct: 325 GFFLKGGSHEALDFWDRMIREGVVPNVVAYNALMHGLCSKRSLGDAVSVFNQMEINGCCP 384
Query: 270 DVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVF 329
+V +Y+ LI+ Y KA + A V+ M+ G P AY ++D + M +QA +
Sbjct: 385 NVRTYSALIDGYAKAGDLDGASEVWNWMITHGCHPNVVAYTCMVDVLCRNSMFNQAYCLI 444
Query: 330 KCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPN-------------- 375
+ M+ + C P+ ++ T + + ++ A K F ++ G PN
Sbjct: 445 ENMQVENCPPNTVTFNTFIKGLCGSGRVDWAIKVFDQMGNSGCFPNTTTYNELLDSLLKD 504
Query: 376 ---------------------VITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIF 414
++TY T+I GY L + +E+ KM V G KP+
Sbjct: 505 RRFGEAFGLVKDMEHRGIELNLVTYNTIIYGYCCAGMLGEALELLGKMVVRGTKPDAITV 564
Query: 415 TTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLS 454
++DAY K + A+ + + + PD A L+S
Sbjct: 565 NIVIDAYCKQGKVNIAIQLMDRLSAGKWHPDIIAYTSLIS 604
Score = 111 bits (278), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 77/364 (21%), Positives = 159/364 (43%), Gaps = 6/364 (1%)
Query: 93 DFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEA 152
D N + + +I A G+ + VL+ M +G +P++ + T+L++ + G A
Sbjct: 278 DPNVISYTTIINALSDAGNVELSLAVLAKMFARGCSPNLHTFTSLIKGFFLKGGSHEALD 337
Query: 153 IFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIY 212
+ RM G P+ + Y ++ +A VF + E + P+ + + +I
Sbjct: 338 FWDRMIREGVVPNVVAYNALMHGLCSKRSLGDAVSVFNQM---EINGCCPNVRTYSALID 394
Query: 213 MYKKAGGYEKARKLFALMAERGVQQSTVTYNSL---MSFETNYKEVSKIYDQMQRAGLQP 269
Y KAG + A +++ M G + V Y + + + + + + + MQ P
Sbjct: 395 GYAKAGDLDGASEVWNWMITHGCHPNVVAYTCMVDVLCRNSMFNQAYCLIENMQVENCPP 454
Query: 270 DVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVF 329
+ V++ I + R + A+ VF++M ++G P YN LLD+ +A +
Sbjct: 455 NTVTFNTFIKGLCGSGRVDWAIKVFDQMGNSGCFPNTTTYNELLDSLLKDRRFGEAFGLV 514
Query: 330 KCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKV 389
K M ++ +Y T++ Y A + A + ++ G P+ IT +I Y K
Sbjct: 515 KDMEHRGIELNLVTYNTIIYGYCCAGMLGEALELLGKMVVRGTKPDAITVNIVIDAYCKQ 574
Query: 390 NNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAK 449
+ +++ D++ P+ +T+++ + + A+V+ + M S G P+
Sbjct: 575 GKVNIAIQLMDRLSAGKWHPDIIAYTSLISGICTHIGVEEAIVYLRRMLSEGISPNVATW 634
Query: 450 NILL 453
N+L+
Sbjct: 635 NVLV 638
Score = 108 bits (269), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 80/351 (22%), Positives = 151/351 (43%), Gaps = 6/351 (1%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N F LI + +G ++A M ++G P+VV++ ALM +A ++F
Sbjct: 315 NLHTFTSLIKGFFLKGGSHEALDFWDRMIREGVVPNVVAYNALMHGLCSKRSLGDAVSVF 374
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
+M+ +G P+ TY ++ + +A A EV+ ++ P+ + M+ +
Sbjct: 375 NQMEINGCCPNVRTYSALIDGYAKAGDLDGASEVWNWMITHG---CHPNVVAYTCMVDVL 431
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVS---KIYDQMQRAGLQPDV 271
+ + +A L M +TVT+N+ + V K++DQM +G P+
Sbjct: 432 CRNSMFNQAYCLIENMQVENCPPNTVTFNTFIKGLCGSGRVDWAIKVFDQMGNSGCFPNT 491
Query: 272 VSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKC 331
+Y L+++ K RR EA + ++M G+ YN ++ + +GM+ +A +
Sbjct: 492 TTYNELLDSLLKDRRFGEAFGLVKDMEHRGIELNLVTYNTIIYGYCCAGMLGEALELLGK 551
Query: 332 MRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNN 391
M PD + ++ AY + A + RL + P++I Y +LI G
Sbjct: 552 MVVRGTKPDAITVNIVIDAYCKQGKVNIAIQLMDRLSAGKWHPDIIAYTSLISGICTHIG 611
Query: 392 LEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGF 442
+E+ + +M GI PN + ++ N AV + + GF
Sbjct: 612 VEEAIVYLRRMLSEGISPNVATWNVLVRHLFSNMGHSGAVQFLDAVLGSGF 662
>gi|297806463|ref|XP_002871115.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297316952|gb|EFH47374.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 942
Score = 148 bits (373), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 99/387 (25%), Positives = 179/387 (46%), Gaps = 43/387 (11%)
Query: 98 DFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRM 157
+F +++ YG++GD ++A + M +G P+ +T+L+ AY G + A + R+M
Sbjct: 312 EFGLMVKFYGRRGDMHRARETFERMRARGITPTSRIYTSLIHAYAVGRDMEEALSCVRKM 371
Query: 158 QSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKP-DQKMFHMMIYMYKK 216
+ G S +TY +I+ F +A + A+ F DE K K + ++ +IY + +
Sbjct: 372 KEEGIEMSLVTYSVIVGGFSKAGNAEAADHWF----DEAKRIHKTLNASIYGKIIYAHCQ 427
Query: 217 AGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSK---IYDQMQRAGLQPDVVS 273
E+A L M E G+ Y+++M T + K ++ +++ G P VV+
Sbjct: 428 TCNMERAEALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLIVFKRLKECGFTPTVVT 487
Query: 274 YALLINAYGKARREEEAL-----------------------------------AVFEEML 298
Y LIN Y K + +AL AVFE+M+
Sbjct: 488 YGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMV 547
Query: 299 DAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDME 358
G++P YN ++ AF G +D+A K M++ R P ++ +++ + + DM
Sbjct: 548 KEGMKPDVILYNNIIAAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIINGFAKSGDMR 607
Query: 359 GAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIM 418
+ + F +++ G VP V T+ LI G + +EK +EI D+M + G+ N+ +T IM
Sbjct: 608 RSLEVFDMMRRCGCVPTVHTFNALINGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKIM 667
Query: 419 DAYGKNKDFDSAVVWYKEMESCGFPPD 445
Y D A ++ +++ G D
Sbjct: 668 QGYASVGDTGKAFEYFTRLQNEGLEVD 694
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 104/387 (26%), Positives = 183/387 (47%), Gaps = 10/387 (2%)
Query: 59 PKDLVLGTLVRLKQLKKWNVVSEVLEWLRI--QSWWDFNEMDFLMLITAYGKQGDFNKAE 116
P + G L+ L K +S+ LE R+ + N + M+I + K D+ A
Sbjct: 483 PTVVTYGCLINL--YTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAF 540
Query: 117 KVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLF 176
V M K+G P V+ + ++ A+ G A + MQ RP+ T+ I+ F
Sbjct: 541 AVFEDMVKEGMKPDVILYNNIIAAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIINGF 600
Query: 177 VEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQ 236
++ + + EVF + + P F+ +I + EKA ++ M GV
Sbjct: 601 AKSGDMRRSLEVFDMM---RRCGCVPTVHTFNALINGLVEKRQMEKAVEILDEMTLAGVS 657
Query: 237 QSTVTYNSLMSFETNYKEVSKIYD---QMQRAGLQPDVVSYALLINAYGKARREEEALAV 293
+ TY +M + + K ++ ++Q GL+ D+ +Y L+ A K+ R + ALAV
Sbjct: 658 ANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLEVDIFTYEALLKACCKSGRMQSALAV 717
Query: 294 FEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVN 353
+EM + YNIL+D +A G V +A + + M+++ PDI +YT+ +SA
Sbjct: 718 TKEMSARNIPRNSFVYNILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTSFISACSK 777
Query: 354 ASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTI 413
A DM A + ++ G PN+ TY TLIKG+A+ + EK + Y++M+ G+KP++ +
Sbjct: 778 AGDMNRATQTIEEMEALGVKPNIKTYTTLIKGWARASLPEKALSCYEEMKAVGLKPDKAV 837
Query: 414 FTTIMDAYGKNKDFDSAVVWYKEMESC 440
+ ++ + A ++ M C
Sbjct: 838 YHCLLTSLLSRASIAEAYIYSGVMTIC 864
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 49/218 (22%), Positives = 102/218 (46%), Gaps = 4/218 (1%)
Query: 251 NYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYN 310
N++ V ++++ + P + L++ YG+ A FE M G+ PT + Y
Sbjct: 294 NWQAVISAFEKINK----PSRTEFGLMVKFYGRRGDMHRARETFERMRARGITPTSRIYT 349
Query: 311 ILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQD 370
L+ A+A+ +++A + + M+ + + +Y+ ++ + A + E A+ +F K+
Sbjct: 350 SLIHAYAVGRDMEEALSCVRKMKEEGIEMSLVTYSVIVGGFSKAGNAEAADHWFDEAKRI 409
Query: 371 GFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSA 430
N YG +I + + N+E+ + +M GI I+ T+MD Y D
Sbjct: 410 HKTLNASIYGKIIYAHCQTCNMERAEALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKG 469
Query: 431 VVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANEL 468
++ +K ++ CGF P L++L + ++A E+
Sbjct: 470 LIVFKRLKECGFTPTVVTYGCLINLYTKVGKISKALEV 507
>gi|8843735|dbj|BAA97283.1| unnamed protein product [Arabidopsis thaliana]
Length = 1274
Score = 148 bits (373), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 97/396 (24%), Positives = 188/396 (47%), Gaps = 12/396 (3%)
Query: 63 VLGTLVRLKQ-LKKWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSF 121
+LG++V+ + + W+ + E+L+ FN +LI +G F K+ ++
Sbjct: 164 ILGSVVKSGEDVSVWSFLKEMLKRKICPDVATFN-----ILINVLCAEGSFEKSSYLMQK 218
Query: 122 MNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANK 181
M K GYAP++V++ ++ Y + GR+K A + M+S G TY +++ +N+
Sbjct: 219 MEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNR 278
Query: 182 FKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVT 241
+ ++ L D K + P++ ++ +I + G A +L M G+ + VT
Sbjct: 279 IAKG---YLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVT 335
Query: 242 YNSLMS---FETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEML 298
+N+L+ E N+KE K++ M+ GL P VSY +L++ K + A + M
Sbjct: 336 FNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMK 395
Query: 299 DAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDME 358
GV Y ++D +G +D+A + M +D PDI +Y+ +++ + +
Sbjct: 396 RNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFK 455
Query: 359 GAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIM 418
A++ R+ + G PN I Y TLI ++ L++ + IY+ M + G + F ++
Sbjct: 456 TAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLV 515
Query: 419 DAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLS 454
+ K A + + M S G P+ + + L++
Sbjct: 516 TSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLIN 551
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 87/396 (21%), Positives = 173/396 (43%), Gaps = 7/396 (1%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
+E+ + +L+ K +F+ A M + G +++T +++ + G A +
Sbjct: 367 SEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLL 426
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
M G P +TY ++ F + +FK A+E+ + + L P+ ++ +IY
Sbjct: 427 NEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIY---RVGLSPNGIIYSTLIYNC 483
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSK---IYDQMQRAGLQPDV 271
+ G ++A +++ M G + T+N L++ +V++ M G+ P+
Sbjct: 484 CRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNT 543
Query: 272 VSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKC 331
VS+ LIN YG + +A +VF+EM G PT Y LL G + +A K
Sbjct: 544 VSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKS 603
Query: 332 MRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNN 391
+ + D Y T+L+A + ++ A F + Q +P+ TY +LI G +
Sbjct: 604 LHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGK 663
Query: 392 LEKMMEIYDKMRVNG-IKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKN 450
+ + G + PN+ ++T +D K + + + + ++M++ G PD N
Sbjct: 664 TVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTN 723
Query: 451 ILLSLAKTADERNEANELLGNFNHPNNEPGINGLSI 486
++ + + N+LL + N P + +I
Sbjct: 724 AMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNI 759
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 91/367 (24%), Positives = 174/367 (47%), Gaps = 14/367 (3%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
NE+ + LI + +G A ++L+ M G +P+ V+ AL++ + G +K A +F
Sbjct: 297 NEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMF 356
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
M++ G PS ++Y ++L + +F A +M + +++ + + + MI
Sbjct: 357 YMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRM---KRNGVCVGRITYTGMIDGL 413
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSLMS-------FETNYKEVSKIYDQMQRAGL 267
K G ++A L M++ G+ VTY++L++ F+T + V +IY R GL
Sbjct: 414 CKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIY----RVGL 469
Query: 268 QPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQART 327
P+ + Y+ LI + +EA+ ++E M+ G H +N+L+ + +G V +A
Sbjct: 470 SPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEE 529
Query: 328 VFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYA 387
+CM D P+ S+ +++ Y N+ + A F + + G P TYG+L+KG
Sbjct: 530 FMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLC 589
Query: 388 KVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQK 447
K +L + + + + ++ T++ A K+ + AV + EM PD
Sbjct: 590 KGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSY 649
Query: 448 AKNILLS 454
L+S
Sbjct: 650 TYTSLIS 656
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 85/320 (26%), Positives = 150/320 (46%), Gaps = 8/320 (2%)
Query: 129 PSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEV 188
PSV + L+ Y R G +++ IFR M G PS T IL V++ E V
Sbjct: 123 PSV--YDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSG---EDVSV 177
Query: 189 FMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSF 248
+ L + K + PD F+++I + G +EK+ L M + G + VTYN+++ +
Sbjct: 178 WSFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHW 237
Query: 249 ---ETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPT 305
+ +K ++ D M+ G+ DV +Y +LI+ ++ R + + +M + P
Sbjct: 238 YCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPN 297
Query: 306 HKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFR 365
YN L++ F+ G V A + M SP+ ++ ++ +++ + + A K F
Sbjct: 298 EVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFY 357
Query: 366 RLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNK 425
++ G P+ ++YG L+ G K + Y +M+ NG+ + +T ++D KN
Sbjct: 358 MMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNG 417
Query: 426 DFDSAVVWYKEMESCGFPPD 445
D AVV EM G PD
Sbjct: 418 FLDEAVVLLNEMSKDGIDPD 437
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 87/389 (22%), Positives = 166/389 (42%), Gaps = 52/389 (13%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
+I K G ++A +L+ M+K G P +V+++AL+ + + GR+K A+ I R+ G
Sbjct: 409 MIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVG 468
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
P+ + Y ++ KEA ++ ++ E + D F++++ KAG
Sbjct: 469 LSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTR---DHFTFNVLVTSLCKAGKVA 525
Query: 222 KARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSK---IYDQMQRAGLQP--------- 269
+A + M G+ +TV+++ L++ N E K ++D+M + G P
Sbjct: 526 EAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLL 585
Query: 270 --------------------------DVVSYALLINAYGKARREEEALAVFEEMLDAGVR 303
D V Y L+ A K+ +A+++F EM+ +
Sbjct: 586 KGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSIL 645
Query: 304 PTHKAYNILLDAFAISGMVDQARTVFKCM------RRDRCSPDICSYTTMLSAYVNASDM 357
P Y L ISG+ + +TV + R P+ YT + A
Sbjct: 646 PDSYTYTSL-----ISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQW 700
Query: 358 EGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTI 417
+ F ++ G P+++T +I GY+++ +EK ++ +M PN T + +
Sbjct: 701 KAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNIL 760
Query: 418 MDAYGKNKDFDSAVVWYKEMESCGFPPDQ 446
+ Y K KD ++ + Y+ + G PD+
Sbjct: 761 LHGYSKRKDVSTSFLLYRSIILNGILPDK 789
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 83/351 (23%), Positives = 159/351 (45%), Gaps = 8/351 (2%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + F LI + +G+F +A K+ M KG PS VS+ L++ + + A +
Sbjct: 332 NHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFY 391
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDE-EKSPLKPDQKMFHMMIYM 213
RM+ +G +TY ++ + EA + LL+E K + PD + +I
Sbjct: 392 MRMKRNGVCVGRITYTGMIDGLCKNGFLDEA----VVLLNEMSKDGIDPDIVTYSALING 447
Query: 214 YKKAGGYEKARKLFALMAERGVQQSTVTYNSLM---SFETNYKEVSKIYDQMQRAGLQPD 270
+ K G ++ A+++ + G+ + + Y++L+ KE +IY+ M G D
Sbjct: 448 FCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRD 507
Query: 271 VVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFK 330
++ +L+ + KA + EA M G+ P +++ L++ + SG +A +VF
Sbjct: 508 HFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFD 567
Query: 331 CMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVN 390
M + P +Y ++L + AEKF + L + + Y TL+ K
Sbjct: 568 EMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSG 627
Query: 391 NLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCG 441
NL K + ++ +M I P+ +T+++ + A+++ KE E+ G
Sbjct: 628 NLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARG 678
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 91/427 (21%), Positives = 160/427 (37%), Gaps = 81/427 (18%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
+ F +L+T+ K G +AE+ + M G P+ VS L+ YG G A ++F
Sbjct: 507 DHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVF 566
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
M G P+ TY +LK + +EAE+ +L P D M++ ++
Sbjct: 567 DEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSL---HAVPAAVDTVMYNTLLTAM 623
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSLMS--------------------------- 247
K+G KA LF M +R + + TY SL+S
Sbjct: 624 CKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPN 683
Query: 248 -----------FETN-YKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFE 295
F+ +K +QM G PD+V+ +I+ Y + + E+ +
Sbjct: 684 KVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLP 743
Query: 296 EMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNAS 355
EM + P YNILL Y
Sbjct: 744 EMGNQNGGPNLTTYNILLH-----------------------------------GYSKRK 768
Query: 356 DMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFT 415
D+ + +R + +G +P+ +T +L+ G + N LE ++I G++ ++ F
Sbjct: 769 DVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFN 828
Query: 416 TIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHP 475
++ N + + A K M S G D+ + ++S+ E+ +L H
Sbjct: 829 MLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVL----HE 884
Query: 476 NNEPGIN 482
++ GI+
Sbjct: 885 MSKQGIS 891
Score = 92.0 bits (227), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 70/345 (20%), Positives = 149/345 (43%), Gaps = 7/345 (2%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
+I Y + G K +L M + P++ ++ L+ Y + + ++R + +G
Sbjct: 725 MIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNG 784
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
P LT ++ E+N + ++ + ++ D+ F+M+I G
Sbjct: 785 ILPDKLTCHSLVLGICESNMLEIGLKILKAFICR---GVEVDRYTFNMLISKCCANGEIN 841
Query: 222 KARKLFALMAERGVQQSTVTYNSLMSF---ETNYKEVSKIYDQMQRAGLQPDVVSYALLI 278
A L +M G+ T ++++S ++E + +M + G+ P+ Y LI
Sbjct: 842 WAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLI 901
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCS 338
N + + A V EEM+ + P + A + ++ A A G D+A + + M + +
Sbjct: 902 NGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEATLLLRFMLKMKLV 961
Query: 339 PDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEI 398
P I S+TT++ ++ A + + G ++++Y LI G ++ E+
Sbjct: 962 PTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDLVSYNVLITGLCAKGDMALAFEL 1021
Query: 399 YDKMRVNGIKPNQTIFTTIMDA-YGKNKDFDSAVVWYKEMESCGF 442
Y++M+ +G N T + ++ + F A + K++ + GF
Sbjct: 1022 YEEMKGDGFLANATTYKALIRGLLARETAFSGADIILKDLLARGF 1066
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 69/324 (21%), Positives = 136/324 (41%), Gaps = 6/324 (1%)
Query: 122 MNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANK 181
M+ G+ P +V+ A+++ Y R G+ + + M + P+ TY I+L + +K
Sbjct: 710 MDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGY---SK 766
Query: 182 FKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVT 241
K+ F+ + + PD+ H ++ ++ E K+ RGV+ T
Sbjct: 767 RKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYT 826
Query: 242 YNSLMSFETNYKEVSKIYDQ---MQRAGLQPDVVSYALLINAYGKARREEEALAVFEEML 298
+N L+S E++ +D M G+ D + +++ + R +E+ V EM
Sbjct: 827 FNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMS 886
Query: 299 DAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDME 358
G+ P + Y L++ G + A V + M + P + + M+ A +
Sbjct: 887 KQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKAD 946
Query: 359 GAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIM 418
A R + + VP + ++ TL+ K N+ + +E+ M G+K + + ++
Sbjct: 947 EATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDLVSYNVLI 1006
Query: 419 DAYGKNKDFDSAVVWYKEMESCGF 442
D A Y+EM+ GF
Sbjct: 1007 TGLCAKGDMALAFELYEEMKGDGF 1030
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 45/197 (22%), Positives = 83/197 (42%)
Query: 257 KIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAF 316
+I+ M G P V + ++ + K+ + + +EML + P +NIL++
Sbjct: 144 EIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSFLKEMLKRKICPDVATFNILINVL 203
Query: 317 AISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNV 376
G +++ + + M + +P I +Y T+L Y + A + +K G +V
Sbjct: 204 CAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADV 263
Query: 377 ITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKE 436
TY LI + N + K + MR I PN+ + T+++ + A E
Sbjct: 264 CTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNE 323
Query: 437 MESCGFPPDQKAKNILL 453
M S G P+ N L+
Sbjct: 324 MLSFGLSPNHVTFNALI 340
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/186 (18%), Positives = 82/186 (44%), Gaps = 2/186 (1%)
Query: 269 PDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTV 328
P V Y +LI Y + +++L +F M G P+ N +L + SG +
Sbjct: 123 PSV--YDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSF 180
Query: 329 FKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAK 388
K M + + PD+ ++ +++ E + +++++ G+ P ++TY T++ Y K
Sbjct: 181 LKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCK 240
Query: 389 VNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKA 448
+ +E+ D M+ G+ + + ++ ++ + ++M P++
Sbjct: 241 KGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVT 300
Query: 449 KNILLS 454
N L++
Sbjct: 301 YNTLIN 306
>gi|115466932|ref|NP_001057065.1| Os06g0199100 [Oryza sativa Japonica Group]
gi|51091829|dbj|BAD36643.1| putative PPR protein [Oryza sativa Japonica Group]
gi|113595105|dbj|BAF18979.1| Os06g0199100 [Oryza sativa Japonica Group]
Length = 1283
Score = 148 bits (373), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 85/346 (24%), Positives = 174/346 (50%), Gaps = 8/346 (2%)
Query: 99 FLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAI--FRR 156
F ++ Y + G F+ A ++L M + P +VS L+ A + G A+
Sbjct: 64 FNAMMGVYARSGRFDDARQLLDAMRDQDIEPDLVSFNTLINARAKSGCLAAGVALELLHE 123
Query: 157 MQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKK 216
++ +G RP A+TY ++ + + +A VF ++ E +PD ++ M+ ++ +
Sbjct: 124 VRQAGLRPDAITYNTLISACSQGSNLDDAVAVFEEMIASE---CRPDLWTYNAMVSVHGR 180
Query: 217 AGGYEKARKLFALMAERGVQQSTVTYNSLM---SFETNYKEVSKIYDQMQRAGLQPDVVS 273
G ++A +F + E+G Q VTYNSL+ + E + + V ++ +++ +AG + D ++
Sbjct: 181 CGKAQEAELMFKELVEKGFQPDAVTYNSLLYAFAKEGDVERVERVCEELVKAGFRKDGIT 240
Query: 274 YALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMR 333
Y +I+ YGK R + AL +++EM G P Y +L+D+ + +A V + M
Sbjct: 241 YNTMIHMYGKMGRLDLALGLYDEMRAIGCTPDAVTYTVLVDSLGKMDRISEAGKVLEEMA 300
Query: 334 RDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLE 393
P + +++ ++ AY + + AE+ F R+ + G P+ + Y ++ +A+ +
Sbjct: 301 DAGLKPTLVTFSALICAYAKSGRQDDAERTFDRMVESGVKPDRLAYLVMLDVFARSDETR 360
Query: 394 KMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMES 439
K+M +Y M +G KP+ ++ ++ A K + D ++ME+
Sbjct: 361 KLMVLYRAMIKDGYKPDDGLYQVLLAALAKGNEHDEIEGVIQDMEA 406
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 97/405 (23%), Positives = 183/405 (45%), Gaps = 8/405 (1%)
Query: 72 QLKKWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSV 131
+LK W ++ L+ +S D + LI AY + G + A + M KKG P+V
Sbjct: 600 KLKLWQQAENFVKGLKQESGVDRRIWN--ALIHAYAESGLYEHARAIFDIMIKKGPLPTV 657
Query: 132 VSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMT 191
S +M A GR + + +Q + S T ++L+ F +A E +++
Sbjct: 658 ESVNGMMRALIVDGRLDELYVVVQELQDLDIKISKSTVLLMLEAFAKAGDVFEVMKIYNG 717
Query: 192 LLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFET- 250
+ + + P+ ++ +MI + + + A M G + V N+L+ T
Sbjct: 718 M---KAAGYLPNMHLYRIMISLLCHNKRFRDVELMVAEMEGAGFKPDLVVLNTLLLMYTG 774
Query: 251 --NYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKA 308
N+ ++Y + AGL+PD +Y LI Y + R EE + EM G+ P ++
Sbjct: 775 TGNFDRTIEVYHSILEAGLEPDEDTYNTLIVMYSRNFRPEEGFTLLYEMGKRGLTPKLES 834
Query: 309 YNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLK 368
Y ILL A + + +QA +F+ MR + Y M+ Y NA + AE +K
Sbjct: 835 YKILLAASGKAKLWEQADLLFEEMRTKGYRLNRSIYHMMMKIYRNARNHSKAEHLLSAMK 894
Query: 369 QDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFD 428
+DG P + T L+ Y + ++ ++ + ++ + ++ + ++T++DAY +N+D+
Sbjct: 895 EDGIEPTIATMHILMTSYGTSGHPDEAEKVLNSLKSSNLEISTLPYSTVLDAYLRNRDYS 954
Query: 429 SAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFN 473
+ EM+ G PD + + A ++ ++A LL +
Sbjct: 955 LGITKLLEMKRDGVEPDHQVWTSFIRAASLCEQTDDAILLLKSLQ 999
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 71/251 (28%), Positives = 133/251 (52%), Gaps = 5/251 (1%)
Query: 199 PLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVS-- 256
P P ++F+ M+ +Y ++G ++ AR+L M ++ ++ V++N+L++ ++
Sbjct: 56 PHLPTVQVFNAMMGVYARSGRFDDARQLLDAMRDQDIEPDLVSFNTLINARAKSGCLAAG 115
Query: 257 ---KIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILL 313
++ ++++AGL+PD ++Y LI+A + ++A+AVFEEM+ + RP YN ++
Sbjct: 116 VALELLHEVRQAGLRPDAITYNTLISACSQGSNLDDAVAVFEEMIASECRPDLWTYNAMV 175
Query: 314 DAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFV 373
G +A +FK + PD +Y ++L A+ D+E E+ L + GF
Sbjct: 176 SVHGRCGKAQEAELMFKELVEKGFQPDAVTYNSLLYAFAKEGDVERVERVCEELVKAGFR 235
Query: 374 PNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVW 433
+ ITY T+I Y K+ L+ + +YD+MR G P+ +T ++D+ GK A
Sbjct: 236 KDGITYNTMIHMYGKMGRLDLALGLYDEMRAIGCTPDAVTYTVLVDSLGKMDRISEAGKV 295
Query: 434 YKEMESCGFPP 444
+EM G P
Sbjct: 296 LEEMADAGLKP 306
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 84/377 (22%), Positives = 155/377 (41%), Gaps = 36/377 (9%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
+I AYGK + +AE + + ++ + + AL+ AY G Y++A AIF M G
Sbjct: 594 MIEAYGKLKLWQQAENFVKGLKQESGVDRRIWN-ALIHAYAESGLYEHARAIFDIMIKKG 652
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
P P+ + +++ + + E V L D + +K + +M+ + KAG
Sbjct: 653 PLPTVESVNGMMRALIVDGRLDELYVVVQELQDLD---IKISKSTVLLMLEAFAKAG--- 706
Query: 222 KARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSKIYDQMQRAGLQPDVVSYALLINAY 281
+ EV KIY+ M+ AG P++ Y ++I+
Sbjct: 707 -----------------------------DVFEVMKIYNGMKAAGYLPNMHLYRIMISLL 737
Query: 282 GKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDI 341
+R + + EM AG +P N LL + +G D+ V+ + PD
Sbjct: 738 CHNKRFRDVELMVAEMEGAGFKPDLVVLNTLLLMYTGTGNFDRTIEVYHSILEAGLEPDE 797
Query: 342 CSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDK 401
+Y T++ Y E + + G P + +Y L+ K E+ ++++
Sbjct: 798 DTYNTLIVMYSRNFRPEEGFTLLYEMGKRGLTPKLESYKILLAASGKAKLWEQADLLFEE 857
Query: 402 MRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADE 461
MR G + N++I+ +M Y ++ A M+ G P +IL++ T+
Sbjct: 858 MRTKGYRLNRSIYHMMMKIYRNARNHSKAEHLLSAMKEDGIEPTIATMHILMTSYGTSGH 917
Query: 462 RNEANELLGNFNHPNNE 478
+EA ++L + N E
Sbjct: 918 PDEAEKVLNSLKSSNLE 934
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 82/401 (20%), Positives = 170/401 (42%), Gaps = 6/401 (1%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
LIT + F +A +V M G PS + +++ R G + A + S
Sbjct: 523 LITYLEEAELFPEACQVFCDMQFLGIVPSQKIYQSIIYTCCRLGFPETAYQLMDDAARSD 582
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
+ L+ ++ + K + E F+ L +E D+++++ +I+ Y ++G YE
Sbjct: 583 ISLNILSCRVAMIEAYGKLKLWQQAENFVKGLKQESGV---DRRIWNALIHAYAESGLYE 639
Query: 222 KARKLFALMAERGVQQSTVTYNSLMS---FETNYKEVSKIYDQMQRAGLQPDVVSYALLI 278
AR +F +M ++G + + N +M + E+ + ++Q ++ + L++
Sbjct: 640 HARAIFDIMIKKGPLPTVESVNGMMRALIVDGRLDELYVVVQELQDLDIKISKSTVLLML 699
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCS 338
A+ KA E + ++ M AG P Y I++ + + M
Sbjct: 700 EAFAKAGDVFEVMKIYNGMKAAGYLPNMHLYRIMISLLCHNKRFRDVELMVAEMEGAGFK 759
Query: 339 PDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEI 398
PD+ T+L Y + + + + + + G P+ TY TLI Y++ E+ +
Sbjct: 760 PDLVVLNTLLLMYTGTGNFDRTIEVYHSILEAGLEPDEDTYNTLIVMYSRNFRPEEGFTL 819
Query: 399 YDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKT 458
+M G+ P + ++ A GK K ++ A + ++EM + G+ ++ ++++ + +
Sbjct: 820 LYEMGKRGLTPKLESYKILLAASGKAKLWEQADLLFEEMRTKGYRLNRSIYHMMMKIYRN 879
Query: 459 ADERNEANELLGNFNHPNNEPGINGLSISVDEEDDDDDDDE 499
A ++A LL EP I + I + DE
Sbjct: 880 ARNHSKAEHLLSAMKEDGIEPTIATMHILMTSYGTSGHPDE 920
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 77/363 (21%), Positives = 167/363 (46%), Gaps = 7/363 (1%)
Query: 96 EMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFR 155
EM+ L++ + K ++ +L +GY P S ++++AY + G+++ ++
Sbjct: 409 EMNPLVISSILIKAECISQGASLLKRACLQGYEPDGKSLLSILDAYEKMGKHEKGLSLLE 468
Query: 156 RMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYK 215
++ P L + + L + K +A + + ++ D ++ +I +
Sbjct: 469 WIRQHVPNSHNLISECSIMLLCKNGKIVDAIQEYSRKQMLKRGSFGQDCDLYEYLITYLE 528
Query: 216 KAGGYEKARKLFALMAERGVQQSTVTYNSLM--SFETNYKEVS-KIYDQMQRAGLQPDVV 272
+A + +A ++F M G+ S Y S++ + E + ++ D R+ + +++
Sbjct: 529 EAELFPEACQVFCDMQFLGIVPSQKIYQSIIYTCCRLGFPETAYQLMDDAARSDISLNIL 588
Query: 273 SYAL-LINAYGKARREEEALAVFEEM-LDAGVRPTHKAYNILLDAFAISGMVDQARTVFK 330
S + +I AYGK + ++A + + ++GV + +N L+ A+A SG+ + AR +F
Sbjct: 589 SCRVAMIEAYGKLKLWQQAENFVKGLKQESGV--DRRIWNALIHAYAESGLYEHARAIFD 646
Query: 331 CMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVN 390
M + P + S M+ A + ++ + L+ + T +++ +AK
Sbjct: 647 IMIKKGPLPTVESVNGMMRALIVDGRLDELYVVVQELQDLDIKISKSTVLLMLEAFAKAG 706
Query: 391 NLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKN 450
++ ++M+IY+ M+ G PN ++ ++ NK F + EME GF PD N
Sbjct: 707 DVFEVMKIYNGMKAAGYLPNMHLYRIMISLLCHNKRFRDVELMVAEMEGAGFKPDLVVLN 766
Query: 451 ILL 453
LL
Sbjct: 767 TLL 769
>gi|359493281|ref|XP_002272603.2| PREDICTED: pentatricopeptide repeat-containing protein At5g55840-like
[Vitis vinifera]
Length = 2037
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 97/403 (24%), Positives = 182/403 (45%), Gaps = 51/403 (12%)
Query: 91 WWDFNEMD----------FLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEA 140
W F EM F +LI +G+ KA +L M + G+ P++V++ L+
Sbjct: 969 WSLFREMSDKGICPNVGTFNILINGLCVEGNLKKAGNLLKQMEENGFVPTIVTYNTLLNW 1028
Query: 141 YGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPL 200
Y + GRYK A + M G TY + + ++ +A ++ L K +
Sbjct: 1029 YCKKGRYKAAIELIDYMICKGIEADVCTYNVFIDNLCTNHRSAKA---YLLLKKMRKEMI 1085
Query: 201 KPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETN---YKEVSK 257
P++ ++ +I + K G A ++F M++ + + VTYN+L+ + ++E +
Sbjct: 1086 SPNEVTYNTLINGFVKEGKIGVAAQVFNEMSKFDLSPNCVTYNALIGGHCHVGDFEEALR 1145
Query: 258 IYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFA 317
+ D M+ AGL+ + V+Y L+N K + E A + E M + H AY +L+D
Sbjct: 1146 LLDHMEAAGLRLNEVTYGTLLNGLCKHEKFELAKRLLERMRVNDMVVGHIAYTVLIDGLC 1205
Query: 318 ISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVI 377
+GM+D+A + M +D +PD+ +Y+++++ + +++ A++ R+ + G V N I
Sbjct: 1206 KNGMLDEAVQLVGNMYKDGVNPDVITYSSLINGFCRVGNIKSAKEIICRMYRSGLVLNKI 1265
Query: 378 TYGTLIKGYAKVNNLEKMMEIYDKMRVN-------------------------------- 405
Y TLI + + N+ + M++Y M N
Sbjct: 1266 IYSTLIYNFCQHGNVTEAMKVYAVMNCNGHGADHFTCNVLVSSLCRDGKLGEAEKFLCHM 1325
Query: 406 ---GIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPD 445
G+ PN + I++ YG D +A ++ +M CG P
Sbjct: 1326 SRIGLVPNSITYDCIINGYGSIGDPLNAFSFFDDMIKCGQHPS 1368
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 88/354 (24%), Positives = 160/354 (45%), Gaps = 7/354 (1%)
Query: 101 MLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSS 160
+L+++ + G +AEK L M++ G P+ +++ ++ YG G NA + F M
Sbjct: 1304 VLVSSLCRDGKLGEAEKFLCHMSRIGLVPNSITYDCIINGYGSIGDPLNAFSFFDDMIKC 1363
Query: 161 GPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGY 220
G PS TY +LK + EA++ L P D M++ ++ K+G
Sbjct: 1364 GQHPSFFTYGSLLKGLCKGGNLVEAKKFLNRL---HYIPGAVDSVMYNTLLAETCKSGNL 1420
Query: 221 EKARKLFALMAERGVQQSTVTYNSLMS-FETNYKEVSKIY---DQMQRAGLQPDVVSYAL 276
+A LF M + V + TY+SL++ K V+ + M R L P+ V Y
Sbjct: 1421 HEAVALFDKMVQNNVLPDSYTYSSLLTGLCRKGKAVTAVCLFGTAMGRGTLFPNHVMYTC 1480
Query: 277 LINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDR 336
L++ KA + A FEEM+ G P A+N ++D+ + G + +A F MR
Sbjct: 1481 LVDGLSKAGHPKAAFYFFEEMMKKGTCPDTVAFNAIIDSCSRRGQMMKANDFFSTMRWWG 1540
Query: 337 CSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMM 396
P++ +Y +L + + + + ++G P+ +T+ +LI G +K + +
Sbjct: 1541 VCPNLATYNILLHGFSKKQALLRYLSLYSTMMREGIFPDKLTFHSLILGLSKSGIPDLGV 1600
Query: 397 EIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKN 450
++ KM + G +Q F +++ Y ++ A M + G PD+ N
Sbjct: 1601 KLLGKMIMEGTLADQFTFNILINKYSESGKMRKAFDLVNFMNTLGVFPDRDTYN 1654
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 90/409 (22%), Positives = 182/409 (44%), Gaps = 29/409 (7%)
Query: 70 LKQLKKWN--VVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGY 127
LKQL+ + + + L+W+ Q + + + +TA+ +L
Sbjct: 833 LKQLRPVHGRLALKFLKWVIKQPGLELKHLTHMYCLTAH-----------ILVKARMYDS 881
Query: 128 APSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSAL--TYQIILKLFVEANKFKEA 185
A S++ H M G G + +IF + + P +++ + ++++++++ A
Sbjct: 882 AKSILRHLCQM---GIGSK-----SIFGALMDTYPLCNSIPSVFDLLIRVYLKEGMIDYA 933
Query: 186 EEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSL 245
E F + KP +M++ K E LF M+++G+ + T+N L
Sbjct: 934 VETFELV---GLVGFKPSVYTCNMILASMVKDKRTELVWSLFREMSDKGICPNVGTFNIL 990
Query: 246 ---MSFETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGV 302
+ E N K+ + QM+ G P +V+Y L+N Y K R + A+ + + M+ G+
Sbjct: 991 INGLCVEGNLKKAGNLLKQMEENGFVPTIVTYNTLLNWYCKKGRYKAAIELIDYMICKGI 1050
Query: 303 RPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEK 362
YN+ +D + +A + K MR++ SP+ +Y T+++ +V + A +
Sbjct: 1051 EADVCTYNVFIDNLCTNHRSAKAYLLLKKMRKEMISPNEVTYNTLINGFVKEGKIGVAAQ 1110
Query: 363 FFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYG 422
F + + PN +TY LI G+ V + E+ + + D M G++ N+ + T+++
Sbjct: 1111 VFNEMSKFDLSPNCVTYNALIGGHCHVGDFEEALRLLDHMEAAGLRLNEVTYGTLLNGLC 1170
Query: 423 KNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGN 471
K++ F+ A + M A +L+ +EA +L+GN
Sbjct: 1171 KHEKFELAKRLLERMRVNDMVVGHIAYTVLIDGLCKNGMLDEAVQLVGN 1219
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 88/364 (24%), Positives = 170/364 (46%), Gaps = 8/364 (2%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
NE+ + LI + K+G A +V + M+K +P+ V++ AL+ + G ++ A +
Sbjct: 1088 NEVTYNTLINGFVKEGKIGVAAQVFNEMSKFDLSPNCVTYNALIGGHCHVGDFEEALRLL 1147
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEK-SPLKPDQKMFHMMIYM 213
M+++G R + +TY +L + KF+ A+ LL+ + + + + ++I
Sbjct: 1148 DHMEAAGLRLNEVTYGTLLNGLCKHEKFELAKR----LLERMRVNDMVVGHIAYTVLIDG 1203
Query: 214 YKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFET---NYKEVSKIYDQMQRAGLQPD 270
K G ++A +L M + GV +TY+SL++ N K +I +M R+GL +
Sbjct: 1204 LCKNGMLDEAVQLVGNMYKDGVNPDVITYSSLINGFCRVGNIKSAKEIICRMYRSGLVLN 1263
Query: 271 VVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFK 330
+ Y+ LI + + EA+ V+ M G H N+L+ + G + +A
Sbjct: 1264 KIIYSTLIYNFCQHGNVTEAMKVYAVMNCNGHGADHFTCNVLVSSLCRDGKLGEAEKFLC 1323
Query: 331 CMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVN 390
M R P+ +Y +++ Y + D A FF + + G P+ TYG+L+KG K
Sbjct: 1324 HMSRIGLVPNSITYDCIINGYGSIGDPLNAFSFFDDMIKCGQHPSFFTYGSLLKGLCKGG 1383
Query: 391 NLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKN 450
NL + + +++ + ++ T++ K+ + AV + +M PD +
Sbjct: 1384 NLVEAKKFLNRLHYIPGAVDSVMYNTLLAETCKSGNLHEAVALFDKMVQNNVLPDSYTYS 1443
Query: 451 ILLS 454
LL+
Sbjct: 1444 SLLT 1447
Score = 104 bits (260), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 88/364 (24%), Positives = 145/364 (39%), Gaps = 41/364 (11%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + + L+ K G A M KKG P V+ A++++ R G+ A F
Sbjct: 1474 NHVMYTCLVDGLSKAGHPKAAFYFFEEMMKKGTCPDTVAFNAIIDSCSRRGQMMKANDFF 1533
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
M+ G P+ TY I+L F + ++ T++ E + PD+ FH +I
Sbjct: 1534 STMRWWGVCPNLATYNILLHGFSKKQALLRYLSLYSTMMRE---GIFPDKLTFHSLILGL 1590
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSKIYDQ---MQRAGLQPDV 271
K+G + KL M G T+N L++ + ++ K +D M G+ PD
Sbjct: 1591 SKSGIPDLGVKLLGKMIMEGTLADQFTFNILINKYSESGKMRKAFDLVNFMNTLGVFPDR 1650
Query: 272 VSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQA------ 325
+Y + N K E+ V EML+ GV P H Y L++ G + A
Sbjct: 1651 DTYNHIFNGLNKKSAFRESTVVLHEMLENGVIPKHAQYITLINGMCRVGDIQGAFKLKDE 1710
Query: 326 -----------------RTVFKC------------MRRDRCSPDICSYTTMLSAYVNASD 356
R + C M R R P I ++TT++ + +
Sbjct: 1711 MEALGFGSHEVAESAMVRGLLHCGKTEDAMLVLDHMLRMRLLPTIATFTTLMHRFCRDAK 1770
Query: 357 MEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTT 416
+ A K ++ G +V+ Y LI G + E+Y++MR + PN T +
Sbjct: 1771 IAEALKLKGVMELCGLKLDVVAYNVLIMGMCANGDSAAAFELYEEMRHRDLCPNITTYAV 1830
Query: 417 IMDA 420
++DA
Sbjct: 1831 LVDA 1834
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 66/285 (23%), Positives = 123/285 (43%), Gaps = 12/285 (4%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
+++ F LI K G + K+L M +G + L+ Y G+ + A +
Sbjct: 1579 DKLTFHSLILGLSKSGIPDLGVKLLGKMIMEGTLADQFTFNILINKYSESGKMRKAFDLV 1638
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
M + G P TY I + + F+E+ V +L+ + + P + +I
Sbjct: 1639 NFMNTLGVFPDRDTYNHIFNGLNKKSAFRESTVVLHEMLE---NGVIPKHAQYITLINGM 1695
Query: 215 KKAGGYEKARKLFALMAERG-----VQQSTVTYNSLMSFETNYKEVSKIYDQMQRAGLQP 269
+ G + A KL M G V +S + L +T ++ + D M R L P
Sbjct: 1696 CRVGDIQGAFKLKDEMEALGFGSHEVAESAMVRGLLHCGKT--EDAMLVLDHMLRMRLLP 1753
Query: 270 DVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVF 329
+ ++ L++ + + + EAL + M G++ AYN+L+ +G A ++
Sbjct: 1754 TIATFTTLMHRFCRDAKIAEALKLKGVMELCGLKLDVVAYNVLIMGMCANGDSAAAFELY 1813
Query: 330 KCMR-RDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFV 373
+ MR RD C P+I +Y ++ A A+++ EK L++ G +
Sbjct: 1814 EEMRHRDLC-PNITTYAVLVDAISAANNLIQGEKLLTDLQERGLI 1857
>gi|357502623|ref|XP_003621600.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355496615|gb|AES77818.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 890
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 99/392 (25%), Positives = 189/392 (48%), Gaps = 22/392 (5%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
+I G+ G+ N A + +GY +V S +A++ A+GR GR+ +A +FR M S G
Sbjct: 219 MIGTLGRLGEINLALGLFERARLEGYGSTVHSFSAMISAFGRNGRFPDAVDLFRSMSSWG 278
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEE-KSPLKPDQKMFHMMIYMYKKAGGY 220
P+ +TY I+ K + + +V + DE + L PD+ ++ ++ + G +
Sbjct: 279 VVPNVITYNSIID---AGAKGEVSFDVVVKFYDEMIANGLMPDRLTYNSLLSVCASKGMW 335
Query: 221 EKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVS---KIYDQMQRAGLQPDVVSYALL 277
E A+KL + M R + TYN+ + ++ +++++M + P+VV+Y+ +
Sbjct: 336 EMAQKLLSEMDHRCIVPDVFTYNTYLDTLCKAGQIDLARRVFEEMSSKRVWPNVVTYSAM 395
Query: 278 INAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRC 337
++ Y KA E+AL ++EEM V +YN L+ + G +D+A K M R
Sbjct: 396 MDGYAKANLLEDALNLYEEMKLRSVCLDRVSYNTLVGIYEKLGNLDEAIEKCKEMERSGI 455
Query: 338 SPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMME 397
+ D+ +Y +LS Y + + F +K PN +TY T+I Y K ++ M+
Sbjct: 456 NRDVVTYNALLSGYGKHGMYDEVRRLFEEMKARNIYPNTLTYSTMIDMYTKGEMFQEAMD 515
Query: 398 IYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAK 457
+Y + ++ ++ + ++ I+D KN +S+++ M G P+ N ++ ++
Sbjct: 516 VYREFKMARLEIDVVFYSAIIDTLCKNGLMESSIMLLMAMMEKGIKPNVVTFNSIIDASQ 575
Query: 458 TADERNEANELLGNFNHPNNEPGINGLSISVD 489
+ P E G+NG S ++D
Sbjct: 576 QS---------------PTLEYGVNGSSDAID 592
Score = 124 bits (312), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 94/373 (25%), Positives = 178/373 (47%), Gaps = 11/373 (2%)
Query: 63 VLGTLVRLKQLKKWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFM 122
++GTL RL ++ N+ + E R++ + F +I+A+G+ G F A + M
Sbjct: 219 MIGTLGRLGEI---NLALGLFERARLEGYGS-TVHSFSAMISAFGRNGRFPDAVDLFRSM 274
Query: 123 NKKGYAPSVVSHTALMEAYGRGG-RYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANK 181
+ G P+V+++ ++++A +G + + M ++G P LTY +L +
Sbjct: 275 SSWGVVPNVITYNSIIDAGAKGEVSFDVVVKFYDEMIANGLMPDRLTYNSLLSVCASKGM 334
Query: 182 FKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVT 241
++ A+++ L + + + PD ++ + KAG + AR++F M+ + V + VT
Sbjct: 335 WEMAQKL---LSEMDHRCIVPDVFTYNTYLDTLCKAGQIDLARRVFEEMSSKRVWPNVVT 391
Query: 242 YNSLMS--FETNYKE-VSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEML 298
Y+++M + N E +Y++M+ + D VSY L+ Y K +EA+ +EM
Sbjct: 392 YSAMMDGYAKANLLEDALNLYEEMKLRSVCLDRVSYNTLVGIYEKLGNLDEAIEKCKEME 451
Query: 299 DAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDME 358
+G+ YN LL + GM D+ R +F+ M+ P+ +Y+TM+ Y +
Sbjct: 452 RSGINRDVVTYNALLSGYGKHGMYDEVRRLFEEMKARNIYPNTLTYSTMIDMYTKGEMFQ 511
Query: 359 GAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIM 418
A +R K +V+ Y +I K +E + + M GIKPN F +I+
Sbjct: 512 EAMDVYREFKMARLEIDVVFYSAIIDTLCKNGLMESSIMLLMAMMEKGIKPNVVTFNSII 571
Query: 419 DAYGKNKDFDSAV 431
DA ++ + V
Sbjct: 572 DASQQSPTLEYGV 584
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 68/326 (20%), Positives = 147/326 (45%), Gaps = 32/326 (9%)
Query: 108 KQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSAL 167
K G + A +V M+ K P+VV+++A+M+ Y + ++A ++ M+ +
Sbjct: 366 KAGQIDLARRVFEEMSSKRVWPNVVTYSAMMDGYAKANLLEDALNLYEEMKLRSVCLDRV 425
Query: 168 TYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLF 227
+Y ++ ++ + EA E + E+S + D ++ ++ Y K G Y++ R+LF
Sbjct: 426 SYNTLVGIYEKLGNLDEAIE---KCKEMERSGINRDVVTYNALLSGYGKHGMYDEVRRLF 482
Query: 228 ALMAERGVQQSTVTYNSLMSFETN---YKEVSKIYDQMQRAGLQPDVVSYALLINAYGKA 284
M R + +T+TY++++ T ++E +Y + + A L+ DVV Y+ +I+ K
Sbjct: 483 EEMKARNIYPNTLTYSTMIDMYTKGEMFQEAMDVYREFKMARLEIDVVFYSAIIDTLCKN 542
Query: 285 RREEEALAVFEEMLDAGVRPTHKAYNILLDA--------FAISGMVD--------QARTV 328
E ++ + M++ G++P +N ++DA + ++G D + V
Sbjct: 543 GLMESSIMLLMAMMEKGIKPNVVTFNSIIDASQQSPTLEYGVNGSSDAIDYPIEQSSPIV 602
Query: 329 FKCMRRDRCSPD-ICSYTTMLSA---------YVNASDMEGAEKFFRRLKQDGFVPNVIT 378
+++ D I L+A D F+++ + PNV+T
Sbjct: 603 IDGAFQNKPGEDRILKMFEQLAAEKAGHLKKNRSGRQDKHCILWLFQKMHELNIKPNVVT 662
Query: 379 YGTLIKGYAKVNNLEKMMEIYDKMRV 404
+ ++ + N+ E + D +R+
Sbjct: 663 FSAILNACSLCNSYEDASLLLDTLRL 688
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/270 (22%), Positives = 120/270 (44%), Gaps = 15/270 (5%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
L+ Y K G+ ++A + M + G VV++ AL+ YG+ G Y +F M++
Sbjct: 430 LVGIYEKLGNLDEAIEKCKEMERSGINRDVVTYNALLSGYGKHGMYDEVRRLFEEMKARN 489
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
P+ LTY ++ ++ + F+EA +V+ + + L+ D + +I K G E
Sbjct: 490 IYPNTLTYSTMIDMYTKGEMFQEAMDVYREF---KMARLEIDVVFYSAIIDTLCKNGLME 546
Query: 222 KARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSKIYDQMQRAGLQPDVVSYALLIN-A 280
+ L M E+G++ + VT+NS++ + + A P S ++I+ A
Sbjct: 547 SSIMLLMAMMEKGIKPNVVTFNSIIDASQQSPTLEYGVNGSSDAIDYPIEQSSPIVIDGA 606
Query: 281 YGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQART--VFKCMRRDRCS 338
+ E+ L +FE++ A + H N SG D+ +F+ M
Sbjct: 607 FQNKPGEDRILKMFEQL--AAEKAGHLKKN-------RSGRQDKHCILWLFQKMHELNIK 657
Query: 339 PDICSYTTMLSAYVNASDMEGAEKFFRRLK 368
P++ +++ +L+A + E A L+
Sbjct: 658 PNVVTFSAILNACSLCNSYEDASLLLDTLR 687
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/187 (22%), Positives = 82/187 (43%), Gaps = 3/187 (1%)
Query: 270 DVVSYALLINAYGKARREEEALAVFEEMLDA--GVRPTHKAYNILLDAFAISGMVDQART 327
+V Y ++ +G R A F+ ++ G K + ++ G ++ A
Sbjct: 175 EVEDYIYMLKEFGNTRSLLHAKKCFDFIMSKQNGRVDKGKLVSAMIGTLGRLGEINLALG 234
Query: 328 VFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYA 387
+F+ R + + S++ M+SA+ A FR + G VPNVITY ++I A
Sbjct: 235 LFERARLEGYGSTVHSFSAMISAFGRNGRFPDAVDLFRSMSSWGVVPNVITYNSIIDAGA 294
Query: 388 KVN-NLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQ 446
K + + +++ YD+M NG+ P++ + +++ ++ A EM+ PD
Sbjct: 295 KGEVSFDVVVKFYDEMIANGLMPDRLTYNSLLSVCASKGMWEMAQKLLSEMDHRCIVPDV 354
Query: 447 KAKNILL 453
N L
Sbjct: 355 FTYNTYL 361
>gi|410110143|gb|AFV61151.1| pentatricopeptide repeat-containing protein 123, partial [Lippia
velutina]
Length = 382
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 97/374 (25%), Positives = 182/374 (48%), Gaps = 37/374 (9%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
LI K D++KA + S + + G+ P +V++ A++ +G+ ++ A ++ M+++G
Sbjct: 11 LIELSRKLCDYSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMKTAG 70
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
P+ +Y +L ++VE KF EA VF + + E K L D ++MI +Y + G +
Sbjct: 71 VMPNTTSYSTLLTMYVENKKFLEALSVF-SEMREIKCLL--DLTTCNIMIDVYGQLGMAK 127
Query: 222 KARKLFALMAERGVQQSTVTYNSLMSFETN---YKEVSKIYDQMQRAGLQPDVVSYALLI 278
+A KLF M + G++ + V+YN+L+ + + E ++ MQR ++ +VV+Y ++
Sbjct: 128 EADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMM 187
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCS 338
YGK E+A + +EM G+ P Y+ ++ + G +D+A +F+ +R
Sbjct: 188 MIYGKTLEHEKANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVE 247
Query: 339 PDICSYTTMLSAY-------------------------------VNASDMEGAEKFFRRL 367
D + TM+ AY A +E A FR+
Sbjct: 248 IDQILFQTMIVAYERAGLVAHAKRLLHELKRPDNIPRDTAIHILAGAGRIEEATYVFRQA 307
Query: 368 KQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDF 427
G V ++ + ++ +K ++E++DKMR G P+ + +++AYGK ++F
Sbjct: 308 VDAGEVKDITVFERMVHLLSKYKKYSNVVEVFDKMRGLGYFPDSDVIAIVLNAYGKLQEF 367
Query: 428 DSAVVWYKEMESCG 441
D A Y EM+ G
Sbjct: 368 DKANDVYMEMQEVG 381
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 76/280 (27%), Positives = 136/280 (48%), Gaps = 3/280 (1%)
Query: 203 DQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSF---ETNYKEVSKIY 259
D ++ +I + +K Y KA +F+ + G V YN++++ ++E +
Sbjct: 4 DLVLYSNLIELSRKLCDYSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLI 63
Query: 260 DQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAIS 319
+M+ AG+ P+ SY+ L+ Y + ++ EAL+VF EM + NI++D +
Sbjct: 64 SEMKTAGVMPNTTSYSTLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQL 123
Query: 320 GMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITY 379
GM +A +F MR+ P++ SY T+L Y +A A FR +++ NV+TY
Sbjct: 124 GMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTY 183
Query: 380 GTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMES 439
+++ Y K EK + +M+ GI+PN ++TI+ +GK D A + ++++ S
Sbjct: 184 NSMMMIYGKTLEHEKANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRS 243
Query: 440 CGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEP 479
G DQ ++ + A A LL P+N P
Sbjct: 244 SGVEIDQILFQTMIVAYERAGLVAHAKRLLHELKRPDNIP 283
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 66/258 (25%), Positives = 133/258 (51%), Gaps = 6/258 (2%)
Query: 167 LTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKL 226
+ Y +++L + + +A +F L ++S PD ++ MI ++ KA + +AR L
Sbjct: 6 VLYSNLIELSRKLCDYSKAISIFSRL---KRSGFTPDLVAYNAMINVFGKAKLFREARSL 62
Query: 227 FALMAERGVQQSTVTYNSLMSFETNYK---EVSKIYDQMQRAGLQPDVVSYALLINAYGK 283
+ M GV +T +Y++L++ K E ++ +M+ D+ + ++I+ YG+
Sbjct: 63 ISEMKTAGVMPNTTSYSTLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQ 122
Query: 284 ARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICS 343
+EA +F M G+ P +YN LL + + + +A +F+ M+R ++ +
Sbjct: 123 LGMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVT 182
Query: 344 YTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMR 403
Y +M+ Y + E A + ++ G PN ITY T+I + KV L++ ++ K+R
Sbjct: 183 YNSMMMIYGKTLEHEKANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLR 242
Query: 404 VNGIKPNQTIFTTIMDAY 421
+G++ +Q +F T++ AY
Sbjct: 243 SSGVEIDQILFQTMIVAY 260
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/244 (23%), Positives = 115/244 (47%), Gaps = 6/244 (2%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + + L+ YG F +A + M +K +VV++ ++M YG+ ++ A +
Sbjct: 144 NVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLI 203
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
+ MQS G P+++TY I+ ++ + K A +F L S ++ DQ +F MI Y
Sbjct: 204 QEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKL---RSSGVEIDQILFQTMIVAY 260
Query: 215 KKAGGYEKARKLFA-LMAERGVQQSTVTYNSLMSFETNYKEVSKIYDQMQRAGLQPDVVS 273
++AG A++L L + + T + +++ +E + ++ Q AG D+
Sbjct: 261 ERAGLVAHAKRLLHELKRPDNIPRDTAIH--ILAGAGRIEEATYVFRQAVDAGEVKDITV 318
Query: 274 YALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMR 333
+ +++ K ++ + VF++M G P I+L+A+ D+A V+ M+
Sbjct: 319 FERMVHLLSKYKKYSNVVEVFDKMRGLGYFPDSDVIAIVLNAYGKLQEFDKANDVYMEMQ 378
Query: 334 RDRC 337
C
Sbjct: 379 EVGC 382
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 35/142 (24%), Positives = 63/142 (44%)
Query: 340 DICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIY 399
D+ Y+ ++ D A F RLK+ GF P+++ Y +I + K + +
Sbjct: 4 DLVLYSNLIELSRKLCDYSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLI 63
Query: 400 DKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTA 459
+M+ G+ PN T ++T++ Y +NK F A+ + EM D NI++ +
Sbjct: 64 SEMKTAGVMPNTTSYSTLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQL 123
Query: 460 DERNEANELLGNFNHPNNEPGI 481
EA++L EP +
Sbjct: 124 GMAKEADKLFWGMRKMGIEPNV 145
>gi|413948663|gb|AFW81312.1| hypothetical protein ZEAMMB73_082399 [Zea mays]
Length = 798
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 92/343 (26%), Positives = 166/343 (48%), Gaps = 8/343 (2%)
Query: 116 EKVLSFMNKKGY--APSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIIL 173
E +L GY +P+VVS++ +++ + + G A +F M G P +TY ++
Sbjct: 186 ELLLHMTADGGYNCSPNVVSYSTIIDGFFKEGEVDKAYFLFDEMIGQGFPPDVVTYSSLI 245
Query: 174 KLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAER 233
+A +AE + + D+ + P+ + +++MI Y G E+A +L M+
Sbjct: 246 DGLCKAQAMNKAEAILQHMFDK---GVMPNTRTYNIMIRGYCSLGQLEEAVRLLKKMSGS 302
Query: 234 GVQQSTVTYNSLMSFETNY---KEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEA 290
G+Q VTY L+ + E ++D M R G +P+ Y +L++ Y +
Sbjct: 303 GLQPDVVTYILLIQYYCKIGRCAEARSVFDSMVRKGQKPNSTIYHILLHGYATKGALIDV 362
Query: 291 LAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSA 350
+ + M+ G+ H+A+NIL+ A+A G VD+A T F MR++ PD+ SY+T++
Sbjct: 363 RDLLDLMIRDGIPFEHRAFNILICAYAKHGAVDKAMTAFTEMRQNGLRPDVVSYSTVIHI 422
Query: 351 YVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPN 410
+E A F ++ +G PN+I++ +LI G + +K+ E+ +M GI P+
Sbjct: 423 LCKIGRVEDAVYHFNQMVSEGLSPNIISFTSLIHGLCSIGEWKKVEELAFEMINRGIHPD 482
Query: 411 QTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILL 453
TIMD K A ++ + G P+ + N L+
Sbjct: 483 AIFMNTIMDNLCKEGRVVEAQDFFDMVIHIGVKPNVVSYNTLI 525
Score = 139 bits (349), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 94/381 (24%), Positives = 180/381 (47%), Gaps = 41/381 (10%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + + +I + K+G+ +KA + M +G+ P VV++++L++ + AEAI
Sbjct: 202 NVVSYSTIIDGFFKEGEVDKAYFLFDEMIGQGFPPDVVTYSSLIDGLCKAQAMNKAEAIL 261
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
+ M G P+ TY I+++ + + +EA + + S L+PD + ++I Y
Sbjct: 262 QHMFDKGVMPNTRTYNIMIRGYCSLGQLEEAVRLLKKM---SGSGLQPDVVTYILLIQYY 318
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSLM---SFETNYKEVSKIYDQMQRAGLQPDV 271
K G +AR +F M +G + ++ Y+ L+ + + +V + D M R G+ +
Sbjct: 319 CKIGRCAEARSVFDSMVRKGQKPNSTIYHILLHGYATKGALIDVRDLLDLMIRDGIPFEH 378
Query: 272 VSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKC 331
++ +LI AY K ++A+ F EM G+RP +Y+ ++ G V+ A F
Sbjct: 379 RAFNILICAYAKHGAVDKAMTAFTEMRQNGLRPDVVSYSTVIHILCKIGRVEDAVYHFNQ 438
Query: 332 MRRDRCSPDICSYTTMLSAYVNASDM-------------------------------EG- 359
M + SP+I S+T+++ + + EG
Sbjct: 439 MVSEGLSPNIISFTSLIHGLCSIGEWKKVEELAFEMINRGIHPDAIFMNTIMDNLCKEGR 498
Query: 360 ---AEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTT 416
A+ FF + G PNV++Y TLI GY V +++ ++ +D+M G++P+ +
Sbjct: 499 VVEAQDFFDMVIHIGVKPNVVSYNTLIDGYCFVGKMDESIKQFDRMVSIGLRPDSWTYNA 558
Query: 417 IMDAYGKNKDFDSAVVWYKEM 437
+++ Y KN + A+ Y+EM
Sbjct: 559 LLNGYFKNGRVEDALALYREM 579
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 96/387 (24%), Positives = 178/387 (45%), Gaps = 7/387 (1%)
Query: 86 LRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGG 145
L I+ F F +LI AY K G +KA + M + G P VVS++ ++ + G
Sbjct: 368 LMIRDGIPFEHRAFNILICAYAKHGAVDKAMTAFTEMRQNGLRPDVVSYSTVIHILCKIG 427
Query: 146 RYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQK 205
R ++A F +M S G P+ +++ ++ ++K+ EE+ +++ + PD
Sbjct: 428 RVEDAVYHFNQMVSEGLSPNIISFTSLIHGLCSIGEWKKVEELAFEMINR---GIHPDAI 484
Query: 206 MFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLM---SFETNYKEVSKIYDQM 262
+ ++ K G +A+ F ++ GV+ + V+YN+L+ F E K +D+M
Sbjct: 485 FMNTIMDNLCKEGRVVEAQDFFDMVIHIGVKPNVVSYNTLIDGYCFVGKMDESIKQFDRM 544
Query: 263 QRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMV 322
GL+PD +Y L+N Y K R E+ALA++ EM V+ NI+L +G +
Sbjct: 545 VSIGLRPDSWTYNALLNGYFKNGRVEDALALYREMFRKDVKFCAITSNIILHGLFQAGRI 604
Query: 323 DQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTL 382
AR ++ M I +Y T+L S ++ A + F L+ F +V T+ +
Sbjct: 605 VAARELYMKMVDRGTQLRIETYNTVLGGLCENSCVDEALRMFEDLRSKEFELDVWTFNIV 664
Query: 383 IKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGF 442
I KV +++ ++ M + G P+ ++ ++ + + + + + ME G
Sbjct: 665 INALLKVGRIDEAKSLFSAMVLRGPVPHVITYSLMIKSRIEEGLLEESDDLFLSMEKNGC 724
Query: 443 PPDQKAKNILL-SLAKTADERNEANEL 468
D N+++ L + D R L
Sbjct: 725 AADSHMLNVIIRRLLEKGDVRRAGTYL 751
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 93/381 (24%), Positives = 155/381 (40%), Gaps = 37/381 (9%)
Query: 101 MLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNA-EAIFRRMQS 159
+LI + G + A + K G+ V+ L++ G R +A + +FRRM
Sbjct: 99 ILIRCFCTVGRLDLAFAAFALFLKMGWRVQNVTLNQLIKGLCDGKRTDDAMDMVFRRMPE 158
Query: 160 SGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGG 219
G P +Y ++K K +EA E+ + + + P+ + +I + K G
Sbjct: 159 LGYTPDVFSYNALIKGLCVEKKSQEALELLLHMTADGGYNCSPNVVSYSTIIDGFFKEGE 218
Query: 220 YEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSKIYDQMQRAGLQPDVVSYALLIN 279
+KA LF D+M G PDVV+Y+ LI+
Sbjct: 219 VDKAYFLF--------------------------------DEMIGQGFPPDVVTYSSLID 246
Query: 280 AYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSP 339
KA+ +A A+ + M D GV P + YNI++ + G +++A + K M P
Sbjct: 247 GLCKAQAMNKAEAILQHMFDKGVMPNTRTYNIMIRGYCSLGQLEEAVRLLKKMSGSGLQP 306
Query: 340 DICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIY 399
D+ +Y ++ Y A F + + G PN Y L+ GYA L + ++
Sbjct: 307 DVVTYILLIQYYCKIGRCAEARSVFDSMVRKGQKPNSTIYHILLHGYATKGALIDVRDLL 366
Query: 400 DKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPD----QKAKNILLSL 455
D M +GI F ++ AY K+ D A+ + EM G PD +IL +
Sbjct: 367 DLMIRDGIPFEHRAFNILICAYAKHGAVDKAMTAFTEMRQNGLRPDVVSYSTVIHILCKI 426
Query: 456 AKTADERNEANELLGNFNHPN 476
+ D N+++ PN
Sbjct: 427 GRVEDAVYHFNQMVSEGLSPN 447
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 95/446 (21%), Positives = 183/446 (41%), Gaps = 41/446 (9%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + ++I Y G +A ++L M+ G P VV++ L++ Y + GR A ++F
Sbjct: 272 NTRTYNIMIRGYCSLGQLEEAVRLLKKMSGSGLQPDVVTYILLIQYYCKIGRCAEARSVF 331
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
M G +P++ Y I+L + + ++ + L+ + P + + F+++I Y
Sbjct: 332 DSMVRKGQKPNSTIYHILLHGYATKGALIDVRDL-LDLMIRDGIPF--EHRAFNILICAY 388
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSKI---YDQMQRAGLQPDV 271
K G +KA F M + G++ V+Y++++ V ++QM GL P++
Sbjct: 389 AKHGAVDKAMTAFTEMRQNGLRPDVVSYSTVIHILCKIGRVEDAVYHFNQMVSEGLSPNI 448
Query: 272 VSYALLINAYG-----------------------------------KARREEEALAVFEE 296
+S+ LI+ K R EA F+
Sbjct: 449 ISFTSLIHGLCSIGEWKKVEELAFEMINRGIHPDAIFMNTIMDNLCKEGRVVEAQDFFDM 508
Query: 297 MLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASD 356
++ GV+P +YN L+D + G +D++ F M PD +Y +L+ Y
Sbjct: 509 VIHIGVKPNVVSYNTLIDGYCFVGKMDESIKQFDRMVSIGLRPDSWTYNALLNGYFKNGR 568
Query: 357 MEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTT 416
+E A +R + + IT ++ G + + E+Y KM G + + T
Sbjct: 569 VEDALALYREMFRKDVKFCAITSNIILHGLFQAGRIVAARELYMKMVDRGTQLRIETYNT 628
Query: 417 IMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPN 476
++ +N D A+ ++++ S F D NI+++ +EA L
Sbjct: 629 VLGGLCENSCVDEALRMFEDLRSKEFELDVWTFNIVINALLKVGRIDEAKSLFSAMVLRG 688
Query: 477 NEPGINGLSISVDEEDDDDDDDEDDD 502
P + S+ + ++ +E DD
Sbjct: 689 PVPHVITYSLMIKSRIEEGLLEESDD 714
Score = 62.0 bits (149), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 64/285 (22%), Positives = 116/285 (40%), Gaps = 27/285 (9%)
Query: 219 GYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSK----------IYDQMQRAG-- 266
G E A LF + + S +NS+++ S +++ M R+G
Sbjct: 29 GREDALNLFDELLPQARPASVHAFNSVLTVVARADSSSSPRHSAALAVSLFNTMARSGVN 88
Query: 267 -LQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQA 325
+ + +LI + R + A A F L G R + N L I G+ D
Sbjct: 89 MMAANRYIIGILIRCFCTVGRLDLAFAAFALFLKMGWRVQNVTLNQL-----IKGLCDGK 143
Query: 326 RT------VFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDG---FVPNV 376
RT VF+ M +PD+ SY ++ + A + + DG PNV
Sbjct: 144 RTDDAMDMVFRRMPELGYTPDVFSYNALIKGLCVEKKSQEALELLLHMTADGGYNCSPNV 203
Query: 377 ITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKE 436
++Y T+I G+ K ++K ++D+M G P+ +++++D K + + A +
Sbjct: 204 VSYSTIIDGFFKEGEVDKAYFLFDEMIGQGFPPDVVTYSSLIDGLCKAQAMNKAEAILQH 263
Query: 437 MESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGI 481
M G P+ + NI++ + + EA LL + +P +
Sbjct: 264 MFDKGVMPNTRTYNIMIRGYCSLGQLEEAVRLLKKMSGSGLQPDV 308
>gi|147803305|emb|CAN75473.1| hypothetical protein VITISV_002797 [Vitis vinifera]
Length = 1356
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 97/403 (24%), Positives = 182/403 (45%), Gaps = 51/403 (12%)
Query: 91 WWDFNEMD----------FLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEA 140
W F EM F +LI +G+ KA +L M + G+ P++V++ L+
Sbjct: 218 WSLFREMSDKGICPNVGTFNILINGLCVEGNLKKAGNLLKQMEENGFVPTIVTYNTLLNW 277
Query: 141 YGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPL 200
Y + GRYK A + M G TY + + ++ +A ++ L K +
Sbjct: 278 YCKKGRYKAAIELIDYMICKGIEADVCTYNVFIDNLCTNHRSAKA---YLLLKKMRKEMI 334
Query: 201 KPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETN---YKEVSK 257
P++ ++ +I + K G A ++F M++ + + VTYN+L+ + ++E +
Sbjct: 335 SPNEVTYNTLINGFVKEGKIGVAAQVFNEMSKFDLSPNCVTYNALIGGHCHVGDFEEALR 394
Query: 258 IYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFA 317
+ D M+ AGL+ + V+Y L+N K + E A + E M + H AY +L+D
Sbjct: 395 LLDHMEAAGLRLNEVTYGTLLNGLCKHEKFELAKRLLERMRVNDMVVGHIAYTVLIDGLC 454
Query: 318 ISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVI 377
+GM+D+A + M +D +PD+ +Y+++++ + +++ A++ R+ + G V N I
Sbjct: 455 KNGMLDEAVQLVGNMYKDGVNPDVITYSSLINGFCRVGNIKSAKEIICRMYRSGLVLNKI 514
Query: 378 TYGTLIKGYAKVNNLEKMMEIYDKMRVN-------------------------------- 405
Y TLI + + N+ + M++Y M N
Sbjct: 515 IYSTLIYNFCQHGNVTEAMKVYAVMNCNGHGADHFTCNVLVSSLCRDGKLGEAEKFLCHM 574
Query: 406 ---GIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPD 445
G+ PN + I++ YG D +A ++ +M CG P
Sbjct: 575 SRIGLVPNSITYDCIINGYGSIGDPLNAFSFFDDMIKCGQHPS 617
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 88/354 (24%), Positives = 160/354 (45%), Gaps = 7/354 (1%)
Query: 101 MLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSS 160
+L+++ + G +AEK L M++ G P+ +++ ++ YG G NA + F M
Sbjct: 553 VLVSSLCRDGKLGEAEKFLCHMSRIGLVPNSITYDCIINGYGSIGDPLNAFSFFDDMIKC 612
Query: 161 GPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGY 220
G PS TY +LK + EA++ L P D M++ ++ K+G
Sbjct: 613 GQHPSFFTYGSLLKGLCKGGNLVEAKKFLNRL---HYIPGAVDSVMYNTLLAETCKSGNL 669
Query: 221 EKARKLFALMAERGVQQSTVTYNSLMS-FETNYKEVSKIY---DQMQRAGLQPDVVSYAL 276
+A LF M + V + TY+SL++ K V+ + M R L P+ V Y
Sbjct: 670 HEAVALFDKMVQNNVLPDSYTYSSLLTGLCRKGKAVTAVCLFGTAMGRGTLFPNHVMYTC 729
Query: 277 LINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDR 336
L++ KA + A FEEM+ G P A+N ++D+ + G + +A F MR
Sbjct: 730 LVDGLSKAGHPKAAFYFFEEMMKKGTCPDTVAFNAIIDSCSRRGQMMKANDFFSTMRWWG 789
Query: 337 CSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMM 396
P++ +Y +L + + + + ++G P+ +T+ +LI G +K + +
Sbjct: 790 VCPNLATYNILLHGFSKKQALLRYLSLYSTMMREGIFPDKLTFHSLILGLSKSGIPDLGV 849
Query: 397 EIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKN 450
++ KM + G +Q F +++ Y ++ A M + G PD+ N
Sbjct: 850 KLLGKMIMEGTLADQFTFNILINKYSESGKMRKAFDLVNFMNTLGVFPDRDTYN 903
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 90/409 (22%), Positives = 183/409 (44%), Gaps = 29/409 (7%)
Query: 70 LKQLKKWN--VVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGY 127
LKQL+ + + + L+W+ Q + + + +TA+ +L
Sbjct: 82 LKQLRPVHGRLALKFLKWVIKQPGLELKHLTHMYCLTAH-----------ILVKARMYDS 130
Query: 128 APSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSAL--TYQIILKLFVEANKFKEA 185
A S++ H M G G +++IF + + P +++ + ++++++++ A
Sbjct: 131 AKSILRHLCQM---GIG-----SKSIFGALMDTYPLCNSIPSVFDLLIRVYLKEGMIDYA 182
Query: 186 EEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSL 245
E F + KP +M++ K E LF M+++G+ + T+N L
Sbjct: 183 VETFELV---GLVGFKPSVYTCNMILASMVKDKRTELVWSLFREMSDKGICPNVGTFNIL 239
Query: 246 ---MSFETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGV 302
+ E N K+ + QM+ G P +V+Y L+N Y K R + A+ + + M+ G+
Sbjct: 240 INGLCVEGNLKKAGNLLKQMEENGFVPTIVTYNTLLNWYCKKGRYKAAIELIDYMICKGI 299
Query: 303 RPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEK 362
YN+ +D + +A + K MR++ SP+ +Y T+++ +V + A +
Sbjct: 300 EADVCTYNVFIDNLCTNHRSAKAYLLLKKMRKEMISPNEVTYNTLINGFVKEGKIGVAAQ 359
Query: 363 FFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYG 422
F + + PN +TY LI G+ V + E+ + + D M G++ N+ + T+++
Sbjct: 360 VFNEMSKFDLSPNCVTYNALIGGHCHVGDFEEALRLLDHMEAAGLRLNEVTYGTLLNGLC 419
Query: 423 KNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGN 471
K++ F+ A + M A +L+ +EA +L+GN
Sbjct: 420 KHEKFELAKRLLERMRVNDMVVGHIAYTVLIDGLCKNGMLDEAVQLVGN 468
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 88/364 (24%), Positives = 170/364 (46%), Gaps = 8/364 (2%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
NE+ + LI + K+G A +V + M+K +P+ V++ AL+ + G ++ A +
Sbjct: 337 NEVTYNTLINGFVKEGKIGVAAQVFNEMSKFDLSPNCVTYNALIGGHCHVGDFEEALRLL 396
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEK-SPLKPDQKMFHMMIYM 213
M+++G R + +TY +L + KF+ A+ LL+ + + + + ++I
Sbjct: 397 DHMEAAGLRLNEVTYGTLLNGLCKHEKFELAKR----LLERMRVNDMVVGHIAYTVLIDG 452
Query: 214 YKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFET---NYKEVSKIYDQMQRAGLQPD 270
K G ++A +L M + GV +TY+SL++ N K +I +M R+GL +
Sbjct: 453 LCKNGMLDEAVQLVGNMYKDGVNPDVITYSSLINGFCRVGNIKSAKEIICRMYRSGLVLN 512
Query: 271 VVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFK 330
+ Y+ LI + + EA+ V+ M G H N+L+ + G + +A
Sbjct: 513 KIIYSTLIYNFCQHGNVTEAMKVYAVMNCNGHGADHFTCNVLVSSLCRDGKLGEAEKFLC 572
Query: 331 CMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVN 390
M R P+ +Y +++ Y + D A FF + + G P+ TYG+L+KG K
Sbjct: 573 HMSRIGLVPNSITYDCIINGYGSIGDPLNAFSFFDDMIKCGQHPSFFTYGSLLKGLCKGG 632
Query: 391 NLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKN 450
NL + + +++ + ++ T++ K+ + AV + +M PD +
Sbjct: 633 NLVEAKKFLNRLHYIPGAVDSVMYNTLLAETCKSGNLHEAVALFDKMVQNNVLPDSYTYS 692
Query: 451 ILLS 454
LL+
Sbjct: 693 SLLT 696
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 88/364 (24%), Positives = 145/364 (39%), Gaps = 41/364 (11%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + + L+ K G A M KKG P V+ A++++ R G+ A F
Sbjct: 723 NHVMYTCLVDGLSKAGHPKAAFYFFEEMMKKGTCPDTVAFNAIIDSCSRRGQMMKANDFF 782
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
M+ G P+ TY I+L F + ++ T++ E + PD+ FH +I
Sbjct: 783 STMRWWGVCPNLATYNILLHGFSKKQALLRYLSLYSTMMRE---GIFPDKLTFHSLILGL 839
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSKIYDQ---MQRAGLQPDV 271
K+G + KL M G T+N L++ + ++ K +D M G+ PD
Sbjct: 840 SKSGIPDLGVKLLGKMIMEGTLADQFTFNILINKYSESGKMRKAFDLVNFMNTLGVFPDR 899
Query: 272 VSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQA------ 325
+Y + N K E+ V EML+ GV P H Y L++ G + A
Sbjct: 900 DTYNHIFNGLNKKSAFRESTVVLHEMLENGVIPKHAQYITLINGMCRVGDIQGAFKLKDE 959
Query: 326 -----------------RTVFKC------------MRRDRCSPDICSYTTMLSAYVNASD 356
R + C M R R P I ++TT++ + +
Sbjct: 960 MEALGFGSHEVAESAMVRGLLHCGKTEDAMLVLDHMLRMRLLPTIATFTTLMHRFCRDAK 1019
Query: 357 MEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTT 416
+ A K ++ G +V+ Y LI G + E+Y++MR + PN T +
Sbjct: 1020 IAEALKLKGVMELCGLKLDVVAYNVLIMGMCANGDSAAAFELYEEMRHRDLCPNITTYAV 1079
Query: 417 IMDA 420
++DA
Sbjct: 1080 LVDA 1083
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 66/285 (23%), Positives = 123/285 (43%), Gaps = 12/285 (4%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
+++ F LI K G + K+L M +G + L+ Y G+ + A +
Sbjct: 828 DKLTFHSLILGLSKSGIPDLGVKLLGKMIMEGTLADQFTFNILINKYSESGKMRKAFDLV 887
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
M + G P TY I + + F+E+ V +L+ + + P + +I
Sbjct: 888 NFMNTLGVFPDRDTYNHIFNGLNKKSAFRESTVVLHEMLE---NGVIPKHAQYITLINGM 944
Query: 215 KKAGGYEKARKLFALMAERG-----VQQSTVTYNSLMSFETNYKEVSKIYDQMQRAGLQP 269
+ G + A KL M G V +S + L +T ++ + D M R L P
Sbjct: 945 CRVGDIQGAFKLKDEMEALGFGSHEVAESAMVRGLLHCGKT--EDAMLVLDHMLRMRLLP 1002
Query: 270 DVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVF 329
+ ++ L++ + + + EAL + M G++ AYN+L+ +G A ++
Sbjct: 1003 TIATFTTLMHRFCRDAKIAEALKLKGVMELCGLKLDVVAYNVLIMGMCANGDSAAAFELY 1062
Query: 330 KCMR-RDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFV 373
+ MR RD C P+I +Y ++ A A+++ EK L++ G +
Sbjct: 1063 EEMRHRDLC-PNITTYAVLVDAISAANNLIQGEKLLTDLQERGLI 1106
>gi|125590530|gb|EAZ30880.1| hypothetical protein OsJ_14954 [Oryza sativa Japonica Group]
Length = 442
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 96/372 (25%), Positives = 181/372 (48%), Gaps = 7/372 (1%)
Query: 101 MLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSS 160
+L+ A K + +A +++ M +G P+ V++ LM+ G +A + R + S
Sbjct: 47 ILLEATCKGRGYRQAMELIDLMRAEGCTPNNVTYNVLMDGMCGEGDVDDALELLRNLPSH 106
Query: 161 GPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGY 220
G +PS + Y +LK A ++ +A+E+ +L E P P++ F+++IY + G
Sbjct: 107 GCKPSTVNYNTVLKGLCSAERWGDADELVTEML-RENCP--PNEATFNVVIYSLCRKGLL 163
Query: 221 EKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSK---IYDQMQRAGLQPDVVSYALL 277
++A +L M++ G + VTYN++++ + V + +M+ G +PD+V+Y L
Sbjct: 164 QQAIQLLEKMSKHGCTANIVTYNAIINGLCEQRNVDGAMGLLSKMKSYGCKPDIVTYNTL 223
Query: 278 INAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRC 337
+ A R +A + + M G P + +N L+ G++ A VFK M C
Sbjct: 224 LKGLCSAARWVDAEELMDNMTQNGCLPDNVTFNTLIGFLCQKGLMVDAIEVFKQMPDKGC 283
Query: 338 SPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMME 397
+P+ +Y+T++S A+ ++ A + F + GF P+ I Y L + + +E+ ++
Sbjct: 284 TPNSITYSTIISGLAKATKLDQALELFNEMGHKGFNPDKI-YQLLAECLNDDDTIEEAIQ 342
Query: 398 IYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAK 457
K++ +GI P+ ++ I+ +N + A+ M S G PD IL+
Sbjct: 343 TVRKLQDSGISPHTVLYNAILLGLCRNGKTEFAIDIMAYMVSSGCMPDDLTYVILIEGLA 402
Query: 458 TADERNEANELL 469
NEA ELL
Sbjct: 403 YEGYLNEARELL 414
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 75/320 (23%), Positives = 143/320 (44%), Gaps = 6/320 (1%)
Query: 163 RPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEK 222
+P+A TY ++ E + ++A V +L +P D +++++ K GY +
Sbjct: 4 QPNAYTYNPLIHTLCERGQVRDALSVLDDMLCRGCAP---DVVTYNILLEATCKGRGYRQ 60
Query: 223 ARKLFALMAERGVQQSTVTYNSLM---SFETNYKEVSKIYDQMQRAGLQPDVVSYALLIN 279
A +L LM G + VTYN LM E + + ++ + G +P V+Y ++
Sbjct: 61 AMELIDLMRAEGCTPNNVTYNVLMDGMCGEGDVDDALELLRNLPSHGCKPSTVNYNTVLK 120
Query: 280 AYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSP 339
A R +A + EML P +N+++ + G++ QA + + M + C+
Sbjct: 121 GLCSAERWGDADELVTEMLRENCPPNEATFNVVIYSLCRKGLLQQAIQLLEKMSKHGCTA 180
Query: 340 DICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIY 399
+I +Y +++ +++GA ++K G P+++TY TL+KG E+
Sbjct: 181 NIVTYNAIINGLCEQRNVDGAMGLLSKMKSYGCKPDIVTYNTLLKGLCSAARWVDAEELM 240
Query: 400 DKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTA 459
D M NG P+ F T++ + A+ +K+M G P+ + ++S A
Sbjct: 241 DNMTQNGCLPDNVTFNTLIGFLCQKGLMVDAIEVFKQMPDKGCTPNSITYSTIISGLAKA 300
Query: 460 DERNEANELLGNFNHPNNEP 479
+ ++A EL H P
Sbjct: 301 TKLDQALELFNEMGHKGFNP 320
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 72/321 (22%), Positives = 148/321 (46%), Gaps = 6/321 (1%)
Query: 129 PSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEV 188
P+ ++ L+ G+ ++A ++ M G P +TY I+L+ + +++A E
Sbjct: 5 PNAYTYNPLIHTLCERGQVRDALSVLDDMLCRGCAPDVVTYNILLEATCKGRGYRQAME- 63
Query: 189 FMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLM-- 246
+ L+ E P+ +++++ G + A +L + G + STV YN+++
Sbjct: 64 LIDLMRAEGC--TPNNVTYNVLMDGMCGEGDVDDALELLRNLPSHGCKPSTVNYNTVLKG 121
Query: 247 -SFETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPT 305
+ + ++ +M R P+ ++ ++I + + ++A+ + E+M G
Sbjct: 122 LCSAERWGDADELVTEMLRENCPPNEATFNVVIYSLCRKGLLQQAIQLLEKMSKHGCTAN 181
Query: 306 HKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFR 365
YN +++ VD A + M+ C PDI +Y T+L +A+ AE+
Sbjct: 182 IVTYNAIINGLCEQRNVDGAMGLLSKMKSYGCKPDIVTYNTLLKGLCSAARWVDAEELMD 241
Query: 366 RLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNK 425
+ Q+G +P+ +T+ TLI + + +E++ +M G PN ++TI+ K
Sbjct: 242 NMTQNGCLPDNVTFNTLIGFLCQKGLMVDAIEVFKQMPDKGCTPNSITYSTIISGLAKAT 301
Query: 426 DFDSAVVWYKEMESCGFPPDQ 446
D A+ + EM GF PD+
Sbjct: 302 KLDQALELFNEMGHKGFNPDK 322
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 64/248 (25%), Positives = 111/248 (44%), Gaps = 3/248 (1%)
Query: 235 VQQSTVTYNSLMSFETNYKEVS---KIYDQMQRAGLQPDVVSYALLINAYGKARREEEAL 291
VQ + TYN L+ +V + D M G PDVV+Y +L+ A K R +A+
Sbjct: 3 VQPNAYTYNPLIHTLCERGQVRDALSVLDDMLCRGCAPDVVTYNILLEATCKGRGYRQAM 62
Query: 292 AVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAY 351
+ + M G P + YN+L+D G VD A + + + C P +Y T+L
Sbjct: 63 ELIDLMRAEGCTPNNVTYNVLMDGMCGEGDVDDALELLRNLPSHGCKPSTVNYNTVLKGL 122
Query: 352 VNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQ 411
+A A++ + ++ PN T+ +I + L++ +++ +KM +G N
Sbjct: 123 CSAERWGDADELVTEMLRENCPPNEATFNVVIYSLCRKGLLQQAIQLLEKMSKHGCTANI 182
Query: 412 TIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGN 471
+ I++ + ++ D A+ +M+S G PD N LL +A +A EL+ N
Sbjct: 183 VTYNAIINGLCEQRNVDGAMGLLSKMKSYGCKPDIVTYNTLLKGLCSAARWVDAEELMDN 242
Query: 472 FNHPNNEP 479
P
Sbjct: 243 MTQNGCLP 250
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 86/384 (22%), Positives = 171/384 (44%), Gaps = 24/384 (6%)
Query: 7 RKFMQKRRKVEVFKDAADEAGKKNWRRLMNQI---EEVGSAVAVLRSERTRGQPLPKDLV 63
R + Q +++ + + LM+ + +V A+ +LR+ + G P +
Sbjct: 56 RGYRQAMELIDLMRAEGCTPNNVTYNVLMDGMCGEGDVDDALELLRNLPSHGCK-PSTVN 114
Query: 64 LGTLVR-LKQLKKWNVVSE-VLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSF 121
T+++ L ++W E V E LR NE F ++I + ++G +A ++L
Sbjct: 115 YNTVLKGLCSAERWGDADELVTEMLR--ENCPPNEATFNVVIYSLCRKGLLQQAIQLLEK 172
Query: 122 MNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANK 181
M+K G ++V++ A++ A + +M+S G +P +TY +LK A +
Sbjct: 173 MSKHGCTANIVTYNAIINGLCEQRNVDGAMGLLSKMKSYGCKPDIVTYNTLLKGLCSAAR 232
Query: 182 FKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVT 241
+ +AEE+ + ++ PD F+ +I + G A ++F M ++G +++T
Sbjct: 233 WVDAEELMDNM---TQNGCLPDNVTFNTLIGFLCQKGLMVDAIEVFKQMPDKGCTPNSIT 289
Query: 242 YNSLMSF---ETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEML 298
Y++++S T + +++++M G PD + Y LL EEA+ ++
Sbjct: 290 YSTIISGLAKATKLDQALELFNEMGHKGFNPDKI-YQLLAECLNDDDTIEEAIQTVRKLQ 348
Query: 299 DAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTML-----SAYVN 353
D+G+ P YN +L +G + A + M C PD +Y ++ Y+N
Sbjct: 349 DSGISPHTVLYNAILLGLCRNGKTEFAIDIMAYMVSSGCMPDDLTYVILIEGLAYEGYLN 408
Query: 354 ASDMEGAEKFFRRLKQDGFVPNVI 377
E E + +D V ++I
Sbjct: 409 ----EARELLIKLCSRDVLVNSLI 428
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 69/303 (22%), Positives = 130/303 (42%), Gaps = 9/303 (2%)
Query: 115 AEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILK 174
A+++++ M ++ P+ + ++ + R G + A + +M G + +TY I+
Sbjct: 131 ADELVTEMLRENCPPNEATFNVVIYSLCRKGLLQQAIQLLEKMSKHGCTANIVTYNAIIN 190
Query: 175 LFVEANKFKEAEEVFMTLLDEEKS-PLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAER 233
E A M LL + KS KPD ++ ++ A + A +L M +
Sbjct: 191 GLCEQRNVDGA----MGLLSKMKSYGCKPDIVTYNTLLKGLCSAARWVDAEELMDNMTQN 246
Query: 234 GVQQSTVTYNSLMSFETN---YKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEA 290
G VT+N+L+ F + +++ QM G P+ ++Y+ +I+ KA + ++A
Sbjct: 247 GCLPDNVTFNTLIGFLCQKGLMVDAIEVFKQMPDKGCTPNSITYSTIISGLAKATKLDQA 306
Query: 291 LAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSA 350
L +F EM G P K Y +L + +++A + ++ SP Y +L
Sbjct: 307 LELFNEMGHKGFNP-DKIYQLLAECLNDDDTIEEAIQTVRKLQDSGISPHTVLYNAILLG 365
Query: 351 YVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPN 410
E A + G +P+ +TY LI+G A L + E+ K+ + N
Sbjct: 366 LCRNGKTEFAIDIMAYMVSSGCMPDDLTYVILIEGLAYEGYLNEARELLIKLCSRDVLVN 425
Query: 411 QTI 413
I
Sbjct: 426 SLI 428
>gi|356527376|ref|XP_003532287.1| PREDICTED: pentatricopeptide repeat-containing protein At5g48730,
chloroplastic-like [Glycine max]
Length = 515
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 98/369 (26%), Positives = 181/369 (49%), Gaps = 9/369 (2%)
Query: 58 LPKDLVLGTLVRLKQLKKWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEK 117
LP+ ++ R+ L+ W +V E L Q W+ + ++ LI GK KA +
Sbjct: 120 LPRTVLEALHERVTALR-WESALKVFELLHEQIWYKPDTGVYIKLIVMLGKCKQPEKAHE 178
Query: 118 VLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSS-GPRPSALTYQIILKLF 176
+ M +G S+TAL+ AY R G A ++ M+++ G +P TY I+LK
Sbjct: 179 LFQAMVDEGCVLDCESYTALLSAYSRSGLLDKAFSLLEEMKNTPGCQPDVQTYSILLKSC 238
Query: 177 VEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFA-LMAERGV 235
++ F + + + L D +KP+ ++ +I Y KA + + + ++A+R
Sbjct: 239 LQVFAFDKIQSL---LSDMTNRGIKPNTVTYNTLIDAYGKARKFSEMESILVEMLADRYC 295
Query: 236 QQSTVTYNSLMSFETNYKEVS---KIYDQMQRAGLQPDVVSYALLINAYGKARREEEALA 292
Q T NS + N ++ K Y++ Q AG+QP+V ++ +L+++YGKA+ ++ A
Sbjct: 296 QPDVWTMNSTLRAFGNIGQIETMEKCYEKFQNAGIQPNVQTFNILLDSYGKAQDYKKMSA 355
Query: 293 VFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYV 352
V E M T +NI++DAF +G + Q +F+ MR +R P + +++ AY
Sbjct: 356 VMEYMQKYHYSWTIVTFNIVIDAFGKAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYA 415
Query: 353 NASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQT 412
A E R ++ + + + + L+ YA++ L +M + + M+ NG KP+
Sbjct: 416 RAGKPEKISGVLRFVENSDVLLDTVFFNCLVDAYARLGCLAEMKGVLEMMKQNGCKPDIV 475
Query: 413 IFTTIMDAY 421
+ T++ Y
Sbjct: 476 TYRTMIKTY 484
Score = 47.0 bits (110), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 35/164 (21%), Positives = 68/164 (41%), Gaps = 36/164 (21%)
Query: 79 VSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALM 138
+S V+E+++ + + + + F ++I A+GK GD + E + M + PS V+ +L+
Sbjct: 353 MSAVMEYMQ-KYHYSWTIVTFNIVIDAFGKAGDLKQMEYLFRLMRSERIKPSCVTLCSLV 411
Query: 139 EAYGRGGRYKNAEAIFR-----------------------------------RMQSSGPR 163
AY R G+ + + R M+ +G +
Sbjct: 412 RAYARAGKPEKISGVLRFVENSDVLLDTVFFNCLVDAYARLGCLAEMKGVLEMMKQNGCK 471
Query: 164 PSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMF 207
P +TY+ ++K + A+E+ L + PLK D+ F
Sbjct: 472 PDIVTYRTMIKTYTYKGMDSHAKELRELLPTVNRPPLKRDKPDF 515
>gi|357521289|ref|XP_003630933.1| Tau class glutathione S-transferase [Medicago truncatula]
gi|355524955|gb|AET05409.1| Tau class glutathione S-transferase [Medicago truncatula]
Length = 1320
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 90/344 (26%), Positives = 167/344 (48%), Gaps = 6/344 (1%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
+I K G+ +AE++L M K G P V +T ++ + + G A +F M+
Sbjct: 318 IILLLCKNGEVVEAEQLLRGMRKWGVFPDNVVYTTVISGFCKLGNVSAACKLFDEMRRKK 377
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
P +TY ++ ++ K EA E+F +L + L+PD+ + +I Y KAG +
Sbjct: 378 IVPDIVTYTSVIHGICKSGKMVEAREMFNEMLVKG---LEPDEVTYTALIDGYCKAGEMK 434
Query: 222 KARKLFALMAERGVQQSTVTYNSLMSFETNYKEV---SKIYDQMQRAGLQPDVVSYALLI 278
+A + M ++G+ + VTY +L E+ +++ +M R GLQP+V +Y ++
Sbjct: 435 EAFSVHNQMVQKGLTPNVVTYTALADGLCKNGEIDVANELLHEMSRKGLQPNVYTYNTIV 494
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCS 338
N K E+ + + EEM AG P Y L+DA+ G + +A + + M R
Sbjct: 495 NGLCKIGNIEQTVKLMEEMDLAGFYPDTITYTTLMDAYCKMGEMAKAHELLRIMLNKRLQ 554
Query: 339 PDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEI 398
P + ++ +++ + + +E E+ + + G +PN T+ +L+K Y NN+ EI
Sbjct: 555 PTLVTFNVLMNGFCMSGMLEDGERLIEWMLEKGIMPNATTFNSLMKQYCIKNNMRATTEI 614
Query: 399 YDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGF 442
Y M G+ P+ + ++ + K ++ A +KEM G+
Sbjct: 615 YKAMHDRGVMPDSNTYNILIKGHCKARNMKEAWFLHKEMVEKGY 658
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 82/358 (22%), Positives = 175/358 (48%), Gaps = 6/358 (1%)
Query: 99 FLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQ 158
+ +I+ + K G+ + A K+ M +K P +V++T+++ + G+ A +F M
Sbjct: 350 YTTVISGFCKLGNVSAACKLFDEMRRKKIVPDIVTYTSVIHGICKSGKMVEAREMFNEML 409
Query: 159 SSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAG 218
G P +TY ++ + +A + KEA V ++ + L P+ + + K G
Sbjct: 410 VKGLEPDEVTYTALIDGYCKAGEMKEAFSVHNQMVQKG---LTPNVVTYTALADGLCKNG 466
Query: 219 GYEKARKLFALMAERGVQQSTVTYNSLMSFET---NYKEVSKIYDQMQRAGLQPDVVSYA 275
+ A +L M+ +G+Q + TYN++++ N ++ K+ ++M AG PD ++Y
Sbjct: 467 EIDVANELLHEMSRKGLQPNVYTYNTIVNGLCKIGNIEQTVKLMEEMDLAGFYPDTITYT 526
Query: 276 LLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRD 335
L++AY K +A + ML+ ++PT +N+L++ F +SGM++ + + M
Sbjct: 527 TLMDAYCKMGEMAKAHELLRIMLNKRLQPTLVTFNVLMNGFCMSGMLEDGERLIEWMLEK 586
Query: 336 RCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKM 395
P+ ++ +++ Y ++M + ++ + G +P+ TY LIKG+ K N+++
Sbjct: 587 GIMPNATTFNSLMKQYCIKNNMRATTEIYKAMHDRGVMPDSNTYNILIKGHCKARNMKEA 646
Query: 396 MEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILL 453
++ +M G + ++ + K K F A ++EM G ++ +I +
Sbjct: 647 WFLHKEMVEKGYSVTAATYDALIRGFYKRKKFVEARKLFEEMRKHGLVAEKDIYDIFV 704
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 85/313 (27%), Positives = 161/313 (51%), Gaps = 8/313 (2%)
Query: 115 AEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILK 174
A KV + G + VS ++ + G+ + A + +M G P ++Y +++
Sbjct: 226 AVKVFEEFPELGVCWNTVSCNIVLHCLCQLGKVREAHNLLVQMTDRGNFPDVVSYGVVVS 285
Query: 175 LFVEANKFKEAEEVFMTLLDEEKSP-LKPDQKMFHMMIYMYKKAGGYEKARKLFALMAER 233
+ E ++V + L+DE K LKPD+ +++ +I + K G +A +L M +
Sbjct: 286 ---GYCRIGELDKV-LKLVDELKGKGLKPDEYIYNNIILLLCKNGEVVEAEQLLRGMRKW 341
Query: 234 GVQQSTVTYNSLMSFETNYKEVS---KIYDQMQRAGLQPDVVSYALLINAYGKARREEEA 290
GV V Y +++S VS K++D+M+R + PD+V+Y +I+ K+ + EA
Sbjct: 342 GVFPDNVVYTTVISGFCKLGNVSAACKLFDEMRRKKIVPDIVTYTSVIHGICKSGKMVEA 401
Query: 291 LAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSA 350
+F EML G+ P Y L+D + +G + +A +V M + +P++ +YT +
Sbjct: 402 REMFNEMLVKGLEPDEVTYTALIDGYCKAGEMKEAFSVHNQMVQKGLTPNVVTYTALADG 461
Query: 351 YVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPN 410
+++ A + + + G PNV TY T++ G K+ N+E+ +++ ++M + G P+
Sbjct: 462 LCKNGEIDVANELLHEMSRKGLQPNVYTYNTIVNGLCKIGNIEQTVKLMEEMDLAGFYPD 521
Query: 411 QTIFTTIMDAYGK 423
+TT+MDAY K
Sbjct: 522 TITYTTLMDAYCK 534
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 89/348 (25%), Positives = 156/348 (44%), Gaps = 8/348 (2%)
Query: 110 GDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTY 169
G+ +K K++ + KG P + ++ + G AE + R M+ G P + Y
Sbjct: 291 GELDKVLKLVDELKGKGLKPDEYIYNNIILLLCKNGEVVEAEQLLRGMRKWGVFPDNVVY 350
Query: 170 QIILKLFVEANKFKEAEEVFMTLLDE-EKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFA 228
++ F + A ++F DE + + PD + +I+ K+G +AR++F
Sbjct: 351 TTVISGFCKLGNVSAACKLF----DEMRRKKIVPDIVTYTSVIHGICKSGKMVEAREMFN 406
Query: 229 LMAERGVQQSTVTYNSLMSFETN---YKEVSKIYDQMQRAGLQPDVVSYALLINAYGKAR 285
M +G++ VTY +L+ KE +++QM + GL P+VV+Y L + K
Sbjct: 407 EMLVKGLEPDEVTYTALIDGYCKAGEMKEAFSVHNQMVQKGLTPNVVTYTALADGLCKNG 466
Query: 286 REEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYT 345
+ A + EM G++P YN +++ G ++Q + + M PD +YT
Sbjct: 467 EIDVANELLHEMSRKGLQPNVYTYNTIVNGLCKIGNIEQTVKLMEEMDLAGFYPDTITYT 526
Query: 346 TMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVN 405
T++ AY +M A + R + P ++T+ L+ G+ LE + + M
Sbjct: 527 TLMDAYCKMGEMAKAHELLRIMLNKRLQPTLVTFNVLMNGFCMSGMLEDGERLIEWMLEK 586
Query: 406 GIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILL 453
GI PN T F ++M Y + + YK M G PD NIL+
Sbjct: 587 GIMPNATTFNSLMKQYCIKNNMRATTEIYKAMHDRGVMPDSNTYNILI 634
Score = 108 bits (270), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 90/382 (23%), Positives = 163/382 (42%), Gaps = 7/382 (1%)
Query: 92 WDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGR-YKNA 150
W + + F + + G +A+K+ + + G SV S + K A
Sbjct: 167 WGSHPLVFDLYFQVLVENGFVLEAQKLFHKLLRYGVVVSVDSCNLFLSRLSCNFEGIKIA 226
Query: 151 EAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMM 210
+F G + ++ I+L + K +EA + + + D P D + ++
Sbjct: 227 VKVFEEFPELGVCWNTVSCNIVLHCLCQLGKVREAHNLLVQMTDRGNFP---DVVSYGVV 283
Query: 211 IYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEV---SKIYDQMQRAGL 267
+ Y + G +K KL + +G++ YN+++ EV ++ M++ G+
Sbjct: 284 VSGYCRIGELDKVLKLVDELKGKGLKPDEYIYNNIILLLCKNGEVVEAEQLLRGMRKWGV 343
Query: 268 QPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQART 327
PD V Y +I+ + K A +F+EM + P Y ++ SG + +AR
Sbjct: 344 FPDNVVYTTVISGFCKLGNVSAACKLFDEMRRKKIVPDIVTYTSVIHGICKSGKMVEARE 403
Query: 328 VFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYA 387
+F M PD +YT ++ Y A +M+ A ++ Q G PNV+TY L G
Sbjct: 404 MFNEMLVKGLEPDEVTYTALIDGYCKAGEMKEAFSVHNQMVQKGLTPNVVTYTALADGLC 463
Query: 388 KVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQK 447
K ++ E+ +M G++PN + TI++ K + + V +EM+ GF PD
Sbjct: 464 KNGEIDVANELLHEMSRKGLQPNVYTYNTIVNGLCKIGNIEQTVKLMEEMDLAGFYPDTI 523
Query: 448 AKNILLSLAKTADERNEANELL 469
L+ E +A+ELL
Sbjct: 524 TYTTLMDAYCKMGEMAKAHELL 545
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 71/310 (22%), Positives = 131/310 (42%), Gaps = 6/310 (1%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
+E+ + LI Y K G+ +A V + M +KG P+VV++TAL + + G A +
Sbjct: 416 DEVTYTALIDGYCKAGEMKEAFSVHNQMVQKGLTPNVVTYTALADGLCKNGEIDVANELL 475
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
M G +P+ TY I+ K E+ + + + + PD + ++ Y
Sbjct: 476 HEMSRKGLQPNVYTYNTIVNGLC---KIGNIEQTVKLMEEMDLAGFYPDTITYTTLMDAY 532
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSLM---SFETNYKEVSKIYDQMQRAGLQPDV 271
K G KA +L +M + +Q + VT+N LM ++ ++ + M G+ P+
Sbjct: 533 CKMGEMAKAHELLRIMLNKRLQPTLVTFNVLMNGFCMSGMLEDGERLIEWMLEKGIMPNA 592
Query: 272 VSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKC 331
++ L+ Y +++ M D GV P YNIL+ + + +A + K
Sbjct: 593 TTFNSLMKQYCIKNNMRATTEIYKAMHDRGVMPDSNTYNILIKGHCKARNMKEAWFLHKE 652
Query: 332 MRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNN 391
M S +Y ++ + A K F +++ G V Y + + N
Sbjct: 653 MVEKGYSVTAATYDALIRGFYKRKKFVEARKLFEEMRKHGLVAEKDIYDIFVDVNYEEGN 712
Query: 392 LEKMMEIYDK 401
E +E+ D+
Sbjct: 713 WEITLELCDE 722
>gi|357499785|ref|XP_003620181.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495196|gb|AES76399.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 559
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 103/417 (24%), Positives = 206/417 (49%), Gaps = 12/417 (2%)
Query: 59 PKDLVLGTLVRLKQLKKWNVVSEVLEWL--RIQSWWDFNEMDFLMLITAYGKQGDFNKAE 116
P + L TL++ LK + + L++ + + N++ + LI K G + A
Sbjct: 140 PNVITLTTLIKGLCLKGQ--IHQALQFHDKVVALGFHLNKVSYGTLINGLCKVGQTSAAL 197
Query: 117 KVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLF 176
++L ++ K P+VV + ++++ + A ++ M S G P +TY ++ F
Sbjct: 198 QLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSKGISPDVVTYNALISGF 257
Query: 177 VEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQ 236
K K+A ++F ++ E + P+ F++++ + K ++A+ + A+M ++G++
Sbjct: 258 CIVGKMKDATDLFNKMIFEN---INPNVYTFNILVDGFCKERRLKEAKNVLAMMMKQGIK 314
Query: 237 QSTVTYNSLMSFETNYKEVSK---IYDQMQRAGLQPDVVSYALLINAYGKARREEEALAV 293
TYNSLM KEV+K I++ + + G+ P++ SY+++I+ + K ++ +EA+ +
Sbjct: 315 PDVFTYNSLMDRYCLVKEVNKAKHIFNTISQRGVNPNIHSYSIMIHGFCKIKKVDEAMNL 374
Query: 294 FEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSP-DICSYTTMLSAYV 352
F+EM + P YN L+D G + A + M DR P D +Y ++L A
Sbjct: 375 FKEMHCNNIIPDVVTYNSLIDGLCKLGKISYALKLVDEMH-DRGVPHDKITYNSILDALC 433
Query: 353 NASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQT 412
++ A ++K +G P++ TY TL+ G K LE +++ + V G +
Sbjct: 434 KNHQVDKAIALLTKMKDEGIQPDICTYTTLVDGLCKNGRLEDARIVFEDLLVKGYILDVN 493
Query: 413 IFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELL 469
I+T ++ + + FD ++ +ME G P+ I++ DE ++A +LL
Sbjct: 494 IYTAMIQGFCSHGLFDESLDLLSKMEENGCIPNAVTYEIIICSLFDKDENDKAEKLL 550
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 92/391 (23%), Positives = 192/391 (49%), Gaps = 20/391 (5%)
Query: 63 VLGTLVRLKQLKKWNVVSEVLEWLRIQSWWDFNEMD-----FLMLITAYGKQGDFNKAEK 117
+LG+LV K N S V+ R +FN + +LI + + G +
Sbjct: 78 ILGSLV------KSNHYSTVVSLHR---QMEFNGITSDLVILSILINCFSQLGQNPLSFS 128
Query: 118 VLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFV 177
VL+ + K GY P+V++ T L++ G+ A ++ + G + ++Y ++
Sbjct: 129 VLAKILKMGYEPNVITLTTLIKGLCLKGQIHQALQFHDKVVALGFHLNKVSYGTLINGLC 188
Query: 178 EANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQ 237
+ + A ++ + + ++P+ M++ +I K +A L++ M +G+
Sbjct: 189 KVGQTSAALQLLRRV---DGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSKGISP 245
Query: 238 STVTYNSLMS---FETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVF 294
VTYN+L+S K+ + ++++M + P+V ++ +L++ + K RR +EA V
Sbjct: 246 DVVTYNALISGFCIVGKMKDATDLFNKMIFENINPNVYTFNILVDGFCKERRLKEAKNVL 305
Query: 295 EEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNA 354
M+ G++P YN L+D + + V++A+ +F + + +P+I SY+ M+ +
Sbjct: 306 AMMMKQGIKPDVFTYNSLMDRYCLVKEVNKAKHIFNTISQRGVNPNIHSYSIMIHGFCKI 365
Query: 355 SDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIF 414
++ A F+ + + +P+V+TY +LI G K+ + +++ D+M G+ ++ +
Sbjct: 366 KKVDEAMNLFKEMHCNNIIPDVVTYNSLIDGLCKLGKISYALKLVDEMHDRGVPHDKITY 425
Query: 415 TTIMDAYGKNKDFDSAVVWYKEMESCGFPPD 445
+I+DA KN D A+ +M+ G PD
Sbjct: 426 NSILDALCKNHQVDKAIALLTKMKDEGIQPD 456
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 93/344 (27%), Positives = 168/344 (48%), Gaps = 6/344 (1%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
+I + K N+A + S M KG +P VV++ AL+ + G+ K+A +F +M
Sbjct: 218 IIDSMCKVKLVNEAFDLYSEMVSKGISPDVVTYNALISGFCIVGKMKDATDLFNKMIFEN 277
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
P+ T+ I++ F + + KEA+ V ++ K +KPD ++ ++ Y
Sbjct: 278 INPNVYTFNILVDGFCKERRLKEAKNVLAMMM---KQGIKPDVFTYNSLMDRYCLVKEVN 334
Query: 222 KARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSK---IYDQMQRAGLQPDVVSYALLI 278
KA+ +F +++RGV + +Y+ ++ K+V + ++ +M + PDVV+Y LI
Sbjct: 335 KAKHIFNTISQRGVNPNIHSYSIMIHGFCKIKKVDEAMNLFKEMHCNNIIPDVVTYNSLI 394
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCS 338
+ K + AL + +EM D GV YN +LDA + VD+A + M+ +
Sbjct: 395 DGLCKLGKISYALKLVDEMHDRGVPHDKITYNSILDALCKNHQVDKAIALLTKMKDEGIQ 454
Query: 339 PDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEI 398
PDIC+YTT++ +E A F L G++ +V Y +I+G+ ++ +++
Sbjct: 455 PDICTYTTLVDGLCKNGRLEDARIVFEDLLVKGYILDVNIYTAMIQGFCSHGLFDESLDL 514
Query: 399 YDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGF 442
KM NG PN + I+ + + D A +EM + G
Sbjct: 515 LSKMEENGCIPNAVTYEIIICSLFDKDENDKAEKLLREMITRGL 558
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 92/419 (21%), Positives = 178/419 (42%), Gaps = 38/419 (9%)
Query: 109 QGDFNKAEKVLSF---MNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPS 165
+ D NK V SF +++K PS+ ++ + + Y ++ R+M+ +G
Sbjct: 47 ENDDNKHNLVSSFNRLLHQKNPKPSIFQFGKILGSLVKSNHYSTVVSLHRQMEFNGITSD 106
Query: 166 ALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSP---------------------LKPDQ 204
+ I++ F + + + V +L P L+
Sbjct: 107 LVILSILINCFSQLGQNPLSFSVLAKILKMGYEPNVITLTTLIKGLCLKGQIHQALQFHD 166
Query: 205 KM----FHM-------MIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYK 253
K+ FH+ +I K G A +L + + VQ + V YN+++ K
Sbjct: 167 KVVALGFHLNKVSYGTLINGLCKVGQTSAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVK 226
Query: 254 EVSK---IYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYN 310
V++ +Y +M G+ PDVV+Y LI+ + + ++A +F +M+ + P +N
Sbjct: 227 LVNEAFDLYSEMVSKGISPDVVTYNALISGFCIVGKMKDATDLFNKMIFENINPNVYTFN 286
Query: 311 ILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQD 370
IL+D F + +A+ V M + PD+ +Y +++ Y ++ A+ F + Q
Sbjct: 287 ILVDGFCKERRLKEAKNVLAMMMKQGIKPDVFTYNSLMDRYCLVKEVNKAKHIFNTISQR 346
Query: 371 GFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSA 430
G PN+ +Y +I G+ K+ +++ M ++ +M N I P+ + +++D K A
Sbjct: 347 GVNPNIHSYSIMIHGFCKIKKVDEAMNLFKEMHCNNIIPDVVTYNSLIDGLCKLGKISYA 406
Query: 431 VVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGINGLSISVD 489
+ EM G P D+ N +L + ++A LL +P I + VD
Sbjct: 407 LKLVDEMHDRGVPHDKITYNSILDALCKNHQVDKAIALLTKMKDEGIQPDICTYTTLVD 465
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 81/373 (21%), Positives = 171/373 (45%), Gaps = 11/373 (2%)
Query: 76 WNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHT 135
++V++++L+ ++ N + LI +G ++A + + G+ + VS+
Sbjct: 127 FSVLAKILKM-----GYEPNVITLTTLIKGLCLKGQIHQALQFHDKVVALGFHLNKVSYG 181
Query: 136 ALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDE 195
L+ + G+ A + RR+ +P+ + Y I+ + EA +++ ++ +
Sbjct: 182 TLINGLCKVGQTSAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSK 241
Query: 196 EKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLM---SFETNY 252
SP D ++ +I + G + A LF M + + T+N L+ E
Sbjct: 242 GISP---DVVTYNALISGFCIVGKMKDATDLFNKMIFENINPNVYTFNILVDGFCKERRL 298
Query: 253 KEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNIL 312
KE + M + G++PDV +Y L++ Y + +A +F + GV P +Y+I+
Sbjct: 299 KEAKNVLAMMMKQGIKPDVFTYNSLMDRYCLVKEVNKAKHIFNTISQRGVNPNIHSYSIM 358
Query: 313 LDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGF 372
+ F VD+A +FK M + PD+ +Y +++ + A K + G
Sbjct: 359 IHGFCKIKKVDEAMNLFKEMHCNNIIPDVVTYNSLIDGLCKLGKISYALKLVDEMHDRGV 418
Query: 373 VPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVV 432
+ ITY +++ K + ++K + + KM+ GI+P+ +TT++D KN + A +
Sbjct: 419 PHDKITYNSILDALCKNHQVDKAIALLTKMKDEGIQPDICTYTTLVDGLCKNGRLEDARI 478
Query: 433 WYKEMESCGFPPD 445
++++ G+ D
Sbjct: 479 VFEDLLVKGYILD 491
>gi|410110099|gb|AFV61129.1| pentatricopeptide repeat-containing protein 123, partial [Lantana
trifolia]
Length = 440
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 101/388 (26%), Positives = 186/388 (47%), Gaps = 37/388 (9%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
LI K D++KA + S + + G+ P +V++ A++ +G+ ++ A ++ M+ +G
Sbjct: 56 LIELSRKXCDYSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLIGEMKXAG 115
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
P+ +Y +L ++VE KF EA VF + + E K L D ++MI +Y + G +
Sbjct: 116 VMPNTASYSTLLTMYVENKKFLEALSVF-SEMREIKCLL--DLTTCNIMIDVYGQLGMAK 172
Query: 222 KARKLFALMAERGVQQSTVTYNSLMSFETN---YKEVSKIYDQMQRAGLQPDVVSYALLI 278
+A KLF M + G++ + V+YN+L+ + + E ++ MQR ++ +VV+Y ++
Sbjct: 173 EADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMM 232
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCS 338
YGK E+A + +EM G+ P Y+ ++ + G +D+A +F+ +R
Sbjct: 233 MIYGKTLEHEKANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGXE 292
Query: 339 PDICSYTTMLSAY-------------------------------VNASDMEGAEKFFRRL 367
D + TM+ AY A +E A FR+
Sbjct: 293 IDQILFQTMIVAYERAGLVAHAKRLLHELKRPDNIPRDTAIHILAGAGRIEEATYVFRQA 352
Query: 368 KQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDF 427
G V ++ + +I +K ++E++DKMR G P+ + +++AYGK ++F
Sbjct: 353 IDAGEVKDITVFERMIHLLSKYKKYSNVVEVFDKMRGLGYFPDSDVIAXVLNAYGKLQEF 412
Query: 428 DSAVVWYKEMESCGFPPDQKAKNILLSL 455
D A Y EM+ G + +LSL
Sbjct: 413 DKANDVYMEMQEVGCVFSDEVHFQMLSL 440
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 85/331 (25%), Positives = 158/331 (47%), Gaps = 6/331 (1%)
Query: 152 AIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMI 211
+F M+ P TY ++ F + F +A ++ +++++ P D ++ +I
Sbjct: 1 GLFDEMRQRALSPDRYTYSTLITHFGKEGLF-DAALSWLQKMEQDRVP--GDLVLYSNLI 57
Query: 212 YMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSF---ETNYKEVSKIYDQMQRAGLQ 268
+ +K Y KA +F+ + G V YN++++ ++E + +M+ AG+
Sbjct: 58 ELSRKXCDYSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLIGEMKXAGVM 117
Query: 269 PDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTV 328
P+ SY+ L+ Y + ++ EAL+VF EM + NI++D + GM +A +
Sbjct: 118 PNTASYSTLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKL 177
Query: 329 FKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAK 388
F MR+ P++ SY T+L Y +A A FR +++ NV+TY +++ Y K
Sbjct: 178 FWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGK 237
Query: 389 VNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKA 448
EK + +M+ GI+PN ++TI+ +GK D A + ++++ S G DQ
Sbjct: 238 TLEHEKANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGXEIDQIL 297
Query: 449 KNILLSLAKTADERNEANELLGNFNHPNNEP 479
++ + A A LL P+N P
Sbjct: 298 FQTMIVAYERAGLVAHAKRLLHELKRPDNIP 328
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 73/303 (24%), Positives = 152/303 (50%), Gaps = 6/303 (1%)
Query: 122 MNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANK 181
M ++ +P +++ L+ +G+ G + A + ++M+ + Y +++L +
Sbjct: 6 MRQRALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKXCD 65
Query: 182 FKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVT 241
+ +A +F L ++S PD ++ MI ++ KA + +AR L M GV +T +
Sbjct: 66 YSKAISIFSRL---KRSGFTPDLVAYNAMINVFGKAKLFREARSLIGEMKXAGVMPNTAS 122
Query: 242 YNSLMSFETNYK---EVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEML 298
Y++L++ K E ++ +M+ D+ + ++I+ YG+ +EA +F M
Sbjct: 123 YSTLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMR 182
Query: 299 DAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDME 358
G+ P +YN LL + + + +A +F+ M+R ++ +Y +M+ Y + E
Sbjct: 183 KMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHE 242
Query: 359 GAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIM 418
A + ++ G PN ITY T+I + KV L++ ++ K+R +G + +Q +F T++
Sbjct: 243 KANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGXEIDQILFQTMI 302
Query: 419 DAY 421
AY
Sbjct: 303 VAY 305
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 84/190 (44%)
Query: 292 AVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAY 351
+F+EM + P Y+ L+ F G+ D A + + M +DR D+ Y+ ++
Sbjct: 1 GLFDEMRQRALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELS 60
Query: 352 VNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQ 411
D A F RLK+ GF P+++ Y +I + K + + +M+ G+ PN
Sbjct: 61 RKXCDYSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLIGEMKXAGVMPNT 120
Query: 412 TIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGN 471
++T++ Y +NK F A+ + EM D NI++ + EA++L
Sbjct: 121 ASYSTLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWG 180
Query: 472 FNHPNNEPGI 481
EP +
Sbjct: 181 MRKMGIEPNV 190
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 60/241 (24%), Positives = 110/241 (45%), Gaps = 37/241 (15%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + + L+ YG F +A + M +K +VV++ ++M YG+ ++ A +
Sbjct: 189 NVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLI 248
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
+ MQS G P+++TY I+ ++ + K A +F L S + DQ +F MI Y
Sbjct: 249 QEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKL---RSSGXEIDQILFQTMIVAY 305
Query: 215 KKAGGYEKARKLF---------------ALMAERG-VQQSTVTYNS-------------- 244
++AG A++L ++A G ++++T +
Sbjct: 306 ERAGLVAHAKRLLHELKRPDNIPRDTAIHILAGAGRIEEATYVFRQAIDAGEVKDITVFE 365
Query: 245 ----LMSFETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDA 300
L+S Y V +++D+M+ G PD A ++NAYGK + ++A V+ EM +
Sbjct: 366 RMIHLLSKYKKYSNVVEVFDKMRGLGYFPDSDVIAXVLNAYGKLQEFDKANDVYMEMQEV 425
Query: 301 G 301
G
Sbjct: 426 G 426
>gi|6633829|gb|AAF19688.1|AC009519_22 F1N19.15 [Arabidopsis thaliana]
Length = 1048
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 95/379 (25%), Positives = 184/379 (48%), Gaps = 12/379 (3%)
Query: 97 MDFLMLITAYGKQGDFNKAEKVLSFMNKK---GYAPSVVSHTALMEAYGRGGRYKNAEAI 153
+DF L+TA + + E V+ F K G + + S T L+ + R R A ++
Sbjct: 72 VDFTRLLTA---TANLRRYETVIYFSQKMELYGISHDLYSFTILIHCFCRCSRLSFALSV 128
Query: 154 FRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYM 213
+M G PS +T+ +L F N+ +A + + ++ KS +P+ +++ +I
Sbjct: 129 LGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMV---KSGYEPNVVVYNTLIDG 185
Query: 214 YKKAGGYEKARKLFALMAERGVQQSTVTYNSLMS---FETNYKEVSKIYDQMQRAGLQPD 270
K G A +L M ++G+ VTYN+L++ + + + +++ M + + PD
Sbjct: 186 LCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPD 245
Query: 271 VVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFK 330
VV++ LI+ + K +EA +++EM+ + V P + YN +++ + G + A+ F
Sbjct: 246 VVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFD 305
Query: 331 CMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVN 390
M C P++ +Y T++S + ++ K F+R+ +GF ++ TY TLI GY +V
Sbjct: 306 LMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVG 365
Query: 391 NLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKN 450
L ++I+ M + P+ ++ N + +SA+V + +M A N
Sbjct: 366 KLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKFDDMRESEKYIGIVAYN 425
Query: 451 ILLSLAKTADERNEANELL 469
I++ AD+ +A EL
Sbjct: 426 IMIHGLCKADKVEKAWELF 444
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 96/387 (24%), Positives = 183/387 (47%), Gaps = 8/387 (2%)
Query: 97 MDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRR 156
+DF ++T K F+ + M G + + S T L+ + R R A A+ +
Sbjct: 605 VDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTILIHCFCRCSRLSLALALLGK 664
Query: 157 MQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDE-EKSPLKPDQKMFHMMIYMYK 215
M G RPS +T +L F + N+F+EA ++L+D + P+ +++ +I
Sbjct: 665 MMKLGFRPSIVTLGSLLNGFCQGNRFQEA----VSLVDSMDGFGFVPNVVIYNTVINGLC 720
Query: 216 KAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETN---YKEVSKIYDQMQRAGLQPDVV 272
K A ++F M ++G++ VTYN+L+S +N + + +++ M + + P+V+
Sbjct: 721 KNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVI 780
Query: 273 SYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCM 332
+ LI+ + K EA +++EM+ V P YN L++ F I G + A+ +F M
Sbjct: 781 FFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLM 840
Query: 333 RRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNL 392
C PD+ +Y T+++ + + +E K F + G V + TY TLI GY + L
Sbjct: 841 VSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKL 900
Query: 393 EKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNIL 452
+++++M G+ P+ + ++D N + A+V ++++ D NI+
Sbjct: 901 NVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNII 960
Query: 453 LSLAKTADERNEANELLGNFNHPNNEP 479
+ D+ EA L + +P
Sbjct: 961 IQGLCRTDKLKEAWCLFRSLTRKGVKP 987
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 90/328 (27%), Positives = 156/328 (47%), Gaps = 6/328 (1%)
Query: 83 LEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYG 142
L L ++S ++ N + + LI K G+ N A ++L+ M KKG VV++ L+
Sbjct: 163 LVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLC 222
Query: 143 RGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKP 202
GR+ +A + R M P +T+ ++ +FV+ EA+E++ ++ +S + P
Sbjct: 223 YSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMI---QSSVDP 279
Query: 203 DQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVS---KIY 259
+ ++ +I G A+K F LMA +G + VTYN+L+S ++ V K++
Sbjct: 280 NNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLF 339
Query: 260 DQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAIS 319
+M G D+ +Y LI+ Y + + AL +F M+ V P + ILL ++
Sbjct: 340 QRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVN 399
Query: 320 GMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITY 379
G ++ A F MR I +Y M+ A +E A + F RL +G P+ TY
Sbjct: 400 GEIESALVKFDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTY 459
Query: 380 GTLIKGYAKVNNLEKMMEIYDKMRVNGI 407
+I G K + E+ +M+ GI
Sbjct: 460 TIMILGLCKNGPRREADELIRRMKEEGI 487
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 93/369 (25%), Positives = 168/369 (45%), Gaps = 11/369 (2%)
Query: 59 PKDLVLGTLVRLKQLKKWNVVSEVLEWLRIQSWWDF--NEMDFLMLITAYGKQGDFNKAE 116
P + LG+L L + N E + + + F N + + +I K D N A
Sbjct: 672 PSIVTLGSL--LNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNAL 729
Query: 117 KVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLF 176
+V M KKG V++ L+ GR+ +A + R M P+ + + ++ F
Sbjct: 730 EVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTF 789
Query: 177 VEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQ 236
V+ EA ++ ++ + + P+ ++ +I + G A+ +F LM +G
Sbjct: 790 VKEGNLLEARNLYKEMI---RRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCF 846
Query: 237 QSTVTYNSLMSFETNYKEVS---KIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAV 293
VTYN+L++ K V K++ +M GL D +Y LI+ Y +A + A V
Sbjct: 847 PDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKV 906
Query: 294 FEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVN 353
F M+D GV P YNILLD +G +++A + + +++ DI +Y ++
Sbjct: 907 FNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCR 966
Query: 354 ASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTI 413
++ A FR L + G P+ I Y T+I G + + ++ +M+ +G P++ I
Sbjct: 967 TDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRMKEDGFMPSERI 1026
Query: 414 F-TTIMDAY 421
+ T+ D Y
Sbjct: 1027 YDETLRDHY 1035
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 80/313 (25%), Positives = 146/313 (46%), Gaps = 6/313 (1%)
Query: 115 AEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILK 174
A ++ M K GY P+VV + L++ + G A + M+ G +TY +L
Sbjct: 160 AFSLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLT 219
Query: 175 LFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERG 234
+ ++ +A + L D K + PD F +I ++ K G ++A++L+ M +
Sbjct: 220 GLCYSGRWSDAARM---LRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSS 276
Query: 235 VQQSTVTYNSL---MSFETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEAL 291
V + VTYNS+ + + K +D M G P+VV+Y LI+ + K R +E +
Sbjct: 277 VDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGM 336
Query: 292 AVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAY 351
+F+ M G YN L+ + G + A +F M R +PDI ++ +L
Sbjct: 337 KLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGL 396
Query: 352 VNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQ 411
++E A F +++ ++ Y +I G K + +EK E++ ++ V G+KP+
Sbjct: 397 CVNGEIESALVKFDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDA 456
Query: 412 TIFTTIMDAYGKN 424
+T ++ KN
Sbjct: 457 RTYTIMILGLCKN 469
Score = 119 bits (298), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 94/427 (22%), Positives = 195/427 (45%), Gaps = 12/427 (2%)
Query: 48 LRSERTRGQPLPKDL-VLGTLVRLKQLKKWNVVSEVLEWLRIQSWWDFNEM-DFLMLITA 105
L E + +P+P + L + ++ K+++V + + ++++ +++ F +LI
Sbjct: 591 LFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIV--IYLYHKMENLGISHDLYSFTILIHC 648
Query: 106 YGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPS 165
+ + + A +L M K G+ PS+V+ +L+ + +G R++ A ++ M G P+
Sbjct: 649 FCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPN 708
Query: 166 ALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARK 225
+ Y ++ + A EVF + EK ++ D ++ +I +G + A +
Sbjct: 709 VVIYNTVINGLCKNRDLNNALEVFYCM---EKKGIRADAVTYNTLISGLSNSGRWTDAAR 765
Query: 226 LFALMAERGVQQSTVTYNSLM-SF--ETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYG 282
L M +R + + + + +L+ +F E N E +Y +M R + P+V +Y LIN +
Sbjct: 766 LLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFC 825
Query: 283 KARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDIC 342
+A +F+ M+ G P YN L+ F S V+ +F M D
Sbjct: 826 IHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAF 885
Query: 343 SYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKM 402
+Y T++ Y A + A+K F R+ G P+++TY L+ +EK + + + +
Sbjct: 886 TYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDL 945
Query: 403 RVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLS-LAKTADE 461
+ + + + + I+ + A ++ + G PD A ++S L + +
Sbjct: 946 QKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQ 1005
Query: 462 RNEANEL 468
R EA++L
Sbjct: 1006 R-EADKL 1011
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 84/347 (24%), Positives = 150/347 (43%), Gaps = 6/347 (1%)
Query: 146 RYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQK 205
++ +A ++F M S P PS + + +L + + NKF ++ + E + D
Sbjct: 584 KFDDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKM---ENLGISHDLY 640
Query: 206 MFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETN---YKEVSKIYDQM 262
F ++I+ + + A L M + G + S VT SL++ ++E + D M
Sbjct: 641 SFTILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSM 700
Query: 263 QRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMV 322
G P+VV Y +IN K R AL VF M G+R YN L+ + SG
Sbjct: 701 DGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRW 760
Query: 323 DQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTL 382
A + + M + + P++ +T ++ +V ++ A ++ + + VPNV TY +L
Sbjct: 761 TDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSL 820
Query: 383 IKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGF 442
I G+ L ++D M G P+ + T++ + K+K + + + EM G
Sbjct: 821 INGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGL 880
Query: 443 PPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGINGLSISVD 489
D N L+ A + N A ++ P I +I +D
Sbjct: 881 VGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLD 927
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 94/204 (46%)
Query: 286 REEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYT 345
R E+A A+F EM+ + P+ + LL A A + + M S D+ S+T
Sbjct: 51 RFEDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYGISHDLYSFT 110
Query: 346 TMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVN 405
++ + S + A ++ + G+ P+++T+G+L+ G+ VN + + M +
Sbjct: 111 ILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKS 170
Query: 406 GIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEA 465
G +PN ++ T++D KN + + A+ EME G D N LL+ + ++A
Sbjct: 171 GYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDA 230
Query: 466 NELLGNFNHPNNEPGINGLSISVD 489
+L + + P + + +D
Sbjct: 231 ARMLRDMMKRSINPDVVTFTALID 254
Score = 65.5 bits (158), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 49/242 (20%), Positives = 99/242 (40%), Gaps = 7/242 (2%)
Query: 252 YKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNI 311
+++ ++ +M + P +V + L+ A RR E + ++M G+ ++ I
Sbjct: 52 FEDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYGISHDLYSFTI 111
Query: 312 LLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDG 371
L+ F + A +V M + P I ++ ++L + + + A + + G
Sbjct: 112 LIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSG 171
Query: 372 FVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAV 431
+ PNV+ Y TLI G K L +E+ ++M G+ + + T++ + + A
Sbjct: 172 YEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAA 231
Query: 432 VWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPG-------INGL 484
++M PD L+ + +EA EL + +P INGL
Sbjct: 232 RMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGL 291
Query: 485 SI 486
+
Sbjct: 292 CM 293
>gi|357167837|ref|XP_003581356.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
mitochondrial-like [Brachypodium distachyon]
Length = 524
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 97/363 (26%), Positives = 175/363 (48%), Gaps = 10/363 (2%)
Query: 128 APSVVSHTALMEAYGRGGRYKNAEAIFRRM-QSSGPRPSALTYQIILKLFVEANKFKEAE 186
+P+ V++ ++ + GR + I R M + G P TY ++ + + K ++A
Sbjct: 144 SPNAVTYNTVIAGFCARGRVQAGIEIMREMRERGGIAPDKYTYATVISGWCKVGKVEDAT 203
Query: 187 EVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLM 246
+VF +L E K ++P+ M++ +I Y G E A + M +RGV + TYN +
Sbjct: 204 KVFDEMLTEGK--VEPNAVMYNALIGGYCDQGNLEVALRYRGEMVDRGVSMTVATYNLFV 261
Query: 247 S---FETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVR 303
E E + ++M GL PD +Y +LIN Y K +E++A+ +FE M+ G+R
Sbjct: 262 HTLFMEGRAAEAHALVEEMGEKGLAPDAFTYNILINGYCKEGKEKKAMKMFEVMVGKGIR 321
Query: 304 PTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKF 363
T Y L+ A ++ GMV + +F R PD+ Y +++++ DM+ A +
Sbjct: 322 ATVVTYTSLIHALSMKGMVQETDRLFNDAVRRGIRPDLFMYNALINSHCTGGDMDRAFEI 381
Query: 364 FRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGK 423
+++ P+ +TY TL++G + L++ + ++M GI+P+ + T++ Y
Sbjct: 382 MGEMEKKRITPDDVTYNTLMRGLCLLGRLDEARGLIEEMTKRGIQPDLVSYNTLISGYSM 441
Query: 424 NKDFDSAVVWYKEMESCGFPPDQKAKNIL---LSL-AKTADERNEANELLGNFNHPNNEP 479
D AV EM GF P N + L L + D + E++GN P++
Sbjct: 442 KGDIKDAVKVRDEMMGKGFNPTLLTYNAMIKGLCLNGQGGDAEDLVKEMVGNGITPDDST 501
Query: 480 GIN 482
I+
Sbjct: 502 YIS 504
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 37/182 (20%), Positives = 85/182 (46%), Gaps = 10/182 (5%)
Query: 258 IYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFA 317
+Y +++ L S L+++ A A +F ++ + + +NI+L
Sbjct: 72 LYSRLKSLSLPIPTASLHPLLSSLPPA----PAFVLFADIFRLRLPLSTTTFNIMLRHLC 127
Query: 318 ISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQ-DGFVPNV 376
+G +A + + M SP+ +Y T+++ + ++ + R +++ G P+
Sbjct: 128 TAGKPVRALELLRQMP----SPNAVTYNTVIAGFCARGRVQAGIEIMREMRERGGIAPDK 183
Query: 377 ITYGTLIKGYAKVNNLEKMMEIYDKMRVNG-IKPNQTIFTTIMDAYGKNKDFDSAVVWYK 435
TY T+I G+ KV +E +++D+M G ++PN ++ ++ Y + + A+ +
Sbjct: 184 YTYATVISGWCKVGKVEDATKVFDEMLTEGKVEPNAVMYNALIGGYCDQGNLEVALRYRG 243
Query: 436 EM 437
EM
Sbjct: 244 EM 245
>gi|225454300|ref|XP_002275491.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
mitochondrial [Vitis vinifera]
gi|297745328|emb|CBI40408.3| unnamed protein product [Vitis vinifera]
Length = 765
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 95/364 (26%), Positives = 182/364 (50%), Gaps = 15/364 (4%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRM---Q 158
L+TA G+ +F + +L+ M + P+VV+ L+ + R A +F +M +
Sbjct: 311 LLTALGRAREFKRMNTLLAEMKEMDIQPNVVTFGILINHLCKFRRVDEALEVFEKMNGGE 370
Query: 159 SSG--PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLK--PDQKMFHMMIYMY 214
S+G P +TY ++ + + +E + L++ +S + P+ ++ +I Y
Sbjct: 371 SNGFLVEPDVITYNTLIDGLCKVGRQEEG----LGLVERMRSQPRCMPNTVTYNCLIDGY 426
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVS---KIYDQMQRAGLQPDV 271
KA E AR+LF M + GV + VT N+L+ + ++ + +++MQ GL+ +
Sbjct: 427 CKASMIEAARELFDQMNKDGVPPNVVTLNTLVDGMCKHGRINGAVEFFNEMQGKGLKGNA 486
Query: 272 VSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKC 331
V+Y LI A+ E+A+ +F+EML+AG P Y L+ + +G +D+A V
Sbjct: 487 VTYTALIRAFCNVNNIEKAMELFDEMLEAGCSPDAIVYYTLISGLSQAGKLDRASFVLSK 546
Query: 332 MRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNN 391
M+ SPDI S+ +++ + + ++ A + + ++ G P+ +TY TLI ++K +
Sbjct: 547 MKEAGFSPDIVSFNVLINGFCRKNKLDEAYEMLKEMENAGIKPDGVTYNTLISHFSKTGD 606
Query: 392 LEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCG-FPPDQKAKN 450
+ KM G+ P + ++ AY N + D A+ +++M S PP+ N
Sbjct: 607 FSTAHRLMKKMVKEGLVPTVVTYGALIHAYCLNGNLDEAMKIFRDMSSTSKVPPNTVIYN 666
Query: 451 ILLS 454
IL++
Sbjct: 667 ILIN 670
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 95/372 (25%), Positives = 163/372 (43%), Gaps = 36/372 (9%)
Query: 82 VLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAY 141
++E +R Q N + + LI Y K A ++ MNK G P+VV+ L++
Sbjct: 402 LVERMRSQPRCMPNTVTYNCLIDGYCKASMIEAARELFDQMNKDGVPPNVVTLNTLVDGM 461
Query: 142 GRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLK 201
+ GR A F MQ G + +A+TY +++ F N ++A E+F +L+ S
Sbjct: 462 CKHGRINGAVEFFNEMQGKGLKGNAVTYTALIRAFCNVNNIEKAMELFDEMLEAGCS--- 518
Query: 202 PDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSKIYDQ 261
PD +++ +I +AG ++A + + M E
Sbjct: 519 PDAIVYYTLISGLSQAGKLDRASFVLSKMKE----------------------------- 549
Query: 262 MQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGM 321
AG PD+VS+ +LIN + + + +EA + +EM +AG++P YN L+ F+ +G
Sbjct: 550 ---AGFSPDIVSFNVLINGFCRKNKLDEAYEMLKEMENAGIKPDGVTYNTLISHFSKTGD 606
Query: 322 VDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFV-PNVITYG 380
A + K M ++ P + +Y ++ AY +++ A K FR + V PN + Y
Sbjct: 607 FSTAHRLMKKMVKEGLVPTVVTYGALIHAYCLNGNLDEAMKIFRDMSSTSKVPPNTVIYN 666
Query: 381 TLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESC 440
LI + N ++ + + D M+V G+KPN F + + A M
Sbjct: 667 ILINSLCRKNQVDLALSLMDDMKVKGVKPNTNTFNAMFKGLQEKNWLSKAFELMDRMTEH 726
Query: 441 GFPPDQKAKNIL 452
PD IL
Sbjct: 727 ACNPDYITMEIL 738
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 98/359 (27%), Positives = 169/359 (47%), Gaps = 12/359 (3%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + LI+ + G ++A VL + K G S AL+ A GR +K +
Sbjct: 269 NSIWLTQLISRLCRSGRTDRAWDVLHGLMKLGGVMEAASCNALLTALGRAREFKRMNTLL 328
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSP--LKPDQKMFHMMIY 212
M+ +P+ +T+ I++ + + EA EVF + E + ++PD ++ +I
Sbjct: 329 AEMKEMDIQPNVVTFGILINHLCKFRRVDEALEVFEKMNGGESNGFLVEPDVITYNTLID 388
Query: 213 MYKKAGGYEKARKLFALM-AERGVQQSTVTYNSLMSFETNYKEVSKI------YDQMQRA 265
K G E+ L M ++ +TVTYN L+ Y + S I +DQM +
Sbjct: 389 GLCKVGRQEEGLGLVERMRSQPRCMPNTVTYNCLID---GYCKASMIEAARELFDQMNKD 445
Query: 266 GLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQA 325
G+ P+VV+ L++ K R A+ F EM G++ Y L+ AF +++A
Sbjct: 446 GVPPNVVTLNTLVDGMCKHGRINGAVEFFNEMQGKGLKGNAVTYTALIRAFCNVNNIEKA 505
Query: 326 RTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKG 385
+F M CSPD Y T++S A ++ A ++K+ GF P+++++ LI G
Sbjct: 506 MELFDEMLEAGCSPDAIVYYTLISGLSQAGKLDRASFVLSKMKEAGFSPDIVSFNVLING 565
Query: 386 YAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPP 444
+ + N L++ E+ +M GIKP+ + T++ + K DF +A K+M G P
Sbjct: 566 FCRKNKLDEAYEMLKEMENAGIKPDGVTYNTLISHFSKTGDFSTAHRLMKKMVKEGLVP 624
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 106/433 (24%), Positives = 193/433 (44%), Gaps = 61/433 (14%)
Query: 101 MLITAYGKQGDFNKAEKVLSFMNKKGYAPSV-VSHT--ALMEAYGRGGRYKNAEAIFRRM 157
+LI +G+ ++ SF+ PS ++H L++ R GR +A + M
Sbjct: 164 LLIRCFGRAQMVDE-----SFLVYNELCPSRRLTHIRNILIDVLFRKGRVDDALHLLDEM 218
Query: 158 QSSGPR--PSALTYQIILKLFVEANKFKEA---EEVFMTLLDEEKSPLKPDQKMFHMMIY 212
P++ T I+ + +K A EE+ + + + P+ +I
Sbjct: 219 LQPKAEFPPNSNTGHIVFSALSKRDKVGRAVDEEEIVGLVSKFAEHEVFPNSIWLTQLIS 278
Query: 213 MYKKAGGYEKARK-LFALMAERGVQQSTVTYNSLMSF---ETNYKEVSKIYDQMQRAGLQ 268
++G ++A L LM GV ++ + N+L++ +K ++ + +M+ +Q
Sbjct: 279 RLCRSGRTDRAWDVLHGLMKLGGVMEAA-SCNALLTALGRAREFKRMNTLLAEMKEMDIQ 337
Query: 269 PDVVSYALLINAYGKARREEEALAVFEEMLDAG------VRPTHKAYNILLDAFAISGMV 322
P+VV++ +LIN K RR +EAL VFE+M + G V P YN L+D G
Sbjct: 338 PNVVTFGILINHLCKFRRVDEALEVFEKM-NGGESNGFLVEPDVITYNTLIDGLCKVGRQ 396
Query: 323 DQARTVFKCMR-RDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNV----- 376
++ + + MR + RC P+ +Y ++ Y AS +E A + F ++ +DG PNV
Sbjct: 397 EEGLGLVERMRSQPRCMPNTVTYNCLIDGYCKASMIEAARELFDQMNKDGVPPNVVTLNT 456
Query: 377 ------------------------------ITYGTLIKGYAKVNNLEKMMEIYDKMRVNG 406
+TY LI+ + VNN+EK ME++D+M G
Sbjct: 457 LVDGMCKHGRINGAVEFFNEMQGKGLKGNAVTYTALIRAFCNVNNIEKAMELFDEMLEAG 516
Query: 407 IKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEAN 466
P+ ++ T++ + D A +M+ GF PD + N+L++ ++ +EA
Sbjct: 517 CSPDAIVYYTLISGLSQAGKLDRASFVLSKMKEAGFSPDIVSFNVLINGFCRKNKLDEAY 576
Query: 467 ELLGNFNHPNNEP 479
E+L + +P
Sbjct: 577 EMLKEMENAGIKP 589
>gi|410110095|gb|AFV61127.1| pentatricopeptide repeat-containing protein 123, partial [Lantana
montevidensis]
Length = 418
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 98/374 (26%), Positives = 182/374 (48%), Gaps = 37/374 (9%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
LI K D++KA + S + + G+ P +V++ A++ +G+ ++ A ++ M+++G
Sbjct: 40 LIELSRKLCDYSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLIGEMKAAG 99
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
P+ +Y +L ++VE KF EA VF + + E K L D ++MI +Y + G +
Sbjct: 100 VMPNTTSYSTLLTMYVENKKFLEALSVF-SEMREIKCLL--DLTTCNIMIDVYGQLGMAK 156
Query: 222 KARKLFALMAERGVQQSTVTYNSLMSFETN---YKEVSKIYDQMQRAGLQPDVVSYALLI 278
+A KLF M + G++ + V+YN+L+ + + E ++ MQR ++ +VV+Y ++
Sbjct: 157 EADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMM 216
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCS 338
YGK E+A + +EM G+ P Y+ ++ + G +D+A +F+ +R
Sbjct: 217 MIYGKTLEHEKANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGXE 276
Query: 339 PDICSYTTMLSAY-------------------------------VNASDMEGAEKFFRRL 367
D + TM+ AY A +E A FR+
Sbjct: 277 IDQILFQTMIVAYERAGLVAHAKRLLHELKRPDNIPRDTAIHILAGAGRIEEATYVFRQA 336
Query: 368 KQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDF 427
G V ++ + +I +K ++E++DKMR G P+ + +++AYGK ++F
Sbjct: 337 IDAGEVKDITVFERMIHLLSKYKKYSNVVEVFDKMRGLGYFPDSDVIAIVLNAYGKLQEF 396
Query: 428 DSAVVWYKEMESCG 441
D A Y EM+ G
Sbjct: 397 DKANDVYMEMQEVG 410
Score = 128 bits (321), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 82/315 (26%), Positives = 153/315 (48%), Gaps = 6/315 (1%)
Query: 168 TYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLF 227
TY ++ F + F +A ++ +++++ P D ++ +I + +K Y KA +F
Sbjct: 1 TYSTLITHFGKEGLF-DAALSWLQKMEQDRVP--GDLVLYSNLIELSRKLCDYSKAISIF 57
Query: 228 ALMAERGVQQSTVTYNSLMSF---ETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKA 284
+ + G V YN++++ ++E + +M+ AG+ P+ SY+ L+ Y +
Sbjct: 58 SRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLIGEMKAAGVMPNTTSYSTLLTMYVEN 117
Query: 285 RREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSY 344
++ EAL+VF EM + NI++D + GM +A +F MR+ P++ SY
Sbjct: 118 KKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSY 177
Query: 345 TTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRV 404
T+L Y +A A FR +++ NV+TY +++ Y K EK + +M+
Sbjct: 178 NTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLIQEMQS 237
Query: 405 NGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNE 464
GI+PN ++TI+ +GK D A + ++++ S G DQ ++ + A
Sbjct: 238 RGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGXEIDQILFQTMIVAYERAGLVAH 297
Query: 465 ANELLGNFNHPNNEP 479
A LL P+N P
Sbjct: 298 AKRLLHELKRPDNIP 312
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 71/292 (24%), Positives = 147/292 (50%), Gaps = 6/292 (2%)
Query: 133 SHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTL 192
+++ L+ +G+ G + A + ++M+ + Y +++L + + +A +F L
Sbjct: 1 TYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDYSKAISIFSRL 60
Query: 193 LDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNY 252
++S PD ++ MI ++ KA + +AR L M GV +T +Y++L++
Sbjct: 61 ---KRSGFTPDLVAYNAMINVFGKAKLFREARSLIGEMKAAGVMPNTTSYSTLLTMYVEN 117
Query: 253 K---EVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAY 309
K E ++ +M+ D+ + ++I+ YG+ +EA +F M G+ P +Y
Sbjct: 118 KKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNVVSY 177
Query: 310 NILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQ 369
N LL + + + +A +F+ M+R ++ +Y +M+ Y + E A + ++
Sbjct: 178 NTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLIQEMQS 237
Query: 370 DGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAY 421
G PN ITY T+I + KV L++ ++ K+R +G + +Q +F T++ AY
Sbjct: 238 RGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGXEIDQILFQTMIVAY 289
Score = 82.0 bits (201), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 59/244 (24%), Positives = 114/244 (46%), Gaps = 6/244 (2%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + + L+ YG F +A + M +K +VV++ ++M YG+ ++ A +
Sbjct: 173 NVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLI 232
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
+ MQS G P+++TY I+ ++ + K A +F L S + DQ +F MI Y
Sbjct: 233 QEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKL---RSSGXEIDQILFQTMIVAY 289
Query: 215 KKAGGYEKARKLFA-LMAERGVQQSTVTYNSLMSFETNYKEVSKIYDQMQRAGLQPDVVS 273
++AG A++L L + + T + +++ +E + ++ Q AG D+
Sbjct: 290 ERAGLVAHAKRLLHELKRPDNIPRDTAIH--ILAGAGRIEEATYVFRQAIDAGEVKDITV 347
Query: 274 YALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMR 333
+ +I+ K ++ + VF++M G P I+L+A+ D+A V+ M+
Sbjct: 348 FERMIHLLSKYKKYSNVVEVFDKMRGLGYFPDSDVIAIVLNAYGKLQEFDKANDVYMEMQ 407
Query: 334 RDRC 337
C
Sbjct: 408 EVGC 411
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/174 (25%), Positives = 78/174 (44%)
Query: 308 AYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRL 367
Y+ L+ F G+ D A + + M +DR D+ Y+ ++ D A F RL
Sbjct: 1 TYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDYSKAISIFSRL 60
Query: 368 KQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDF 427
K+ GF P+++ Y +I + K + + +M+ G+ PN T ++T++ Y +NK F
Sbjct: 61 KRSGFTPDLVAYNAMINVFGKAKLFREARSLIGEMKAAGVMPNTTSYSTLLTMYVENKKF 120
Query: 428 DSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGI 481
A+ + EM D NI++ + EA++L EP +
Sbjct: 121 LEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNV 174
Score = 40.8 bits (94), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 24/108 (22%), Positives = 46/108 (42%)
Query: 378 TYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEM 437
TY TLI + K + + KM + + + +++ +++ K D+ A+ + +
Sbjct: 1 TYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDYSKAISIFSRL 60
Query: 438 ESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGINGLS 485
+ GF PD A N ++++ A EA L+G P S
Sbjct: 61 KRSGFTPDLVAYNAMINVFGKAKLFREARSLIGEMKAAGVMPNTTSYS 108
>gi|410110117|gb|AFV61138.1| pentatricopeptide repeat-containing protein 123, partial [Lippia
hermannioides]
Length = 382
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 98/374 (26%), Positives = 181/374 (48%), Gaps = 37/374 (9%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
LI K D++KA + S + + G+ P +V++ A++ +G+ ++ A ++ M+++G
Sbjct: 11 LIELSRKLCDYSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMKTAG 70
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
P+ +Y +L ++VE KF EA VF + + E K L D ++MI +Y + G +
Sbjct: 71 VMPNTTSYSTLLTMYVENKKFLEALSVF-SEMREIKCLL--DLTTCNIMIDVYGQLGMAK 127
Query: 222 KARKLFALMAERGVQQSTVTYNSLMSFETN---YKEVSKIYDQMQRAGLQPDVVSYALLI 278
+A KLF M + G++ + V+YN+L+ + + E ++ MQR ++ +VV+Y ++
Sbjct: 128 EADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMM 187
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCS 338
YGK E+A + +EM G+ P Y+ ++ + G +D+A +F+ +R
Sbjct: 188 MIYGKTLEHEKANNLIQEMQSRGIEPNSITYSTIISIWGKXGKLDRAAMLFQKLRSSGVE 247
Query: 339 PDICSYTTMLSAY-------------------------------VNASDMEGAEKFFRRL 367
D + TM+ AY A +E A FR+
Sbjct: 248 IDQILFQTMIVAYERAGLVAHAKRLLHELKRPDNIPRDTAIHILAGAGRIEEATYVFRQA 307
Query: 368 KQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDF 427
G V + + +I +K ++E++DKMR G P+ + +++AYGK ++F
Sbjct: 308 IDAGEVKXITVFERMIHLLSKYKKYSNVVEVFDKMRGLGYFPDSDVIAIVLNAYGKLQEF 367
Query: 428 DSAVVWYKEMESCG 441
D A Y EM+ G
Sbjct: 368 DKANDVYMEMQEVG 381
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 76/278 (27%), Positives = 129/278 (46%), Gaps = 38/278 (13%)
Query: 240 VTYNSLMSFE---TNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEE 296
V Y++L+ +Y + I+ +++R+G PD+V+Y +IN +GKA+ EA ++ E
Sbjct: 6 VLYSNLIELSRKLCDYSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISE 65
Query: 297 MLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASD 356
M AGV P +Y+ LL + + +A +VF MR +C D+ + M+ Y
Sbjct: 66 MKTAGVMPNTTSYSTLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGM 125
Query: 357 MEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKV---------------NNLEK------- 394
+ A+K F +++ G PNV++Y TL++ Y N+E+
Sbjct: 126 AKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNS 185
Query: 395 MMEIYDK-------------MRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCG 441
MM IY K M+ GI+PN ++TI+ +GK D A + ++++ S G
Sbjct: 186 MMMIYGKTLEHEKANNLIQEMQSRGIEPNSITYSTIISIWGKXGKLDRAAMLFQKLRSSG 245
Query: 442 FPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEP 479
DQ ++ + A A LL P+N P
Sbjct: 246 VEIDQILFQTMIVAYERAGLVAHAKRLLHELKRPDNIP 283
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 58/244 (23%), Positives = 114/244 (46%), Gaps = 6/244 (2%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + + L+ YG F +A + M +K +VV++ ++M YG+ ++ A +
Sbjct: 144 NVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLI 203
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
+ MQS G P+++TY I+ ++ + K A +F L S ++ DQ +F MI Y
Sbjct: 204 QEMQSRGIEPNSITYSTIISIWGKXGKLDRAAMLFQKL---RSSGVEIDQILFQTMIVAY 260
Query: 215 KKAGGYEKARKLFA-LMAERGVQQSTVTYNSLMSFETNYKEVSKIYDQMQRAGLQPDVVS 273
++AG A++L L + + T + +++ +E + ++ Q AG +
Sbjct: 261 ERAGLVAHAKRLLHELKRPDNIPRDTAIH--ILAGAGRIEEATYVFRQAIDAGEVKXITV 318
Query: 274 YALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMR 333
+ +I+ K ++ + VF++M G P I+L+A+ D+A V+ M+
Sbjct: 319 FERMIHLLSKYKKYSNVVEVFDKMRGLGYFPDSDVIAIVLNAYGKLQEFDKANDVYMEMQ 378
Query: 334 RDRC 337
C
Sbjct: 379 EVGC 382
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 35/142 (24%), Positives = 63/142 (44%)
Query: 340 DICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIY 399
D+ Y+ ++ D A F RLK+ GF P+++ Y +I + K + +
Sbjct: 4 DLVLYSNLIELSRKLCDYSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLI 63
Query: 400 DKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTA 459
+M+ G+ PN T ++T++ Y +NK F A+ + EM D NI++ +
Sbjct: 64 SEMKTAGVMPNTTSYSTLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQL 123
Query: 460 DERNEANELLGNFNHPNNEPGI 481
EA++L EP +
Sbjct: 124 GMAKEADKLFWGMRKMGIEPNV 145
>gi|297793055|ref|XP_002864412.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297310247|gb|EFH40671.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 1245
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 99/421 (23%), Positives = 197/421 (46%), Gaps = 12/421 (2%)
Query: 63 VLGTLVR-LKQLKKWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSF 121
+LG++V+ + + W+ + E+L+ FN +LI +G F K+ ++
Sbjct: 164 ILGSIVKSCEDVSVWSFLKEMLKRKICPDVATFN-----ILINVLCAEGSFKKSSYLMQK 218
Query: 122 MNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANK 181
M K GYAP++V++ ++ Y + GR+K A + M G TY +++ +N+
Sbjct: 219 MEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMNLKGVNADVCTYNMLIHDLCRSNR 278
Query: 182 FKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVT 241
+ + ++ L D K + P++ ++ ++ + G AR+L M G+ + VT
Sbjct: 279 ---SAKGYLLLRDMRKRMIHPNEVTYNTLLNGFSNEGKVLIARQLLNEMLTFGLSPNHVT 335
Query: 242 YNSLMS---FETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEML 298
+N+L+ E N+KE K++ M+ GL VSY +L++ K + A + M
Sbjct: 336 FNALIDGHISEGNFKEALKMFHMMEAKGLIGTEVSYGVLLDGLCKNAEFDLARGFYMRMK 395
Query: 299 DAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDME 358
GV Y ++D +G +D+A + M +D PDI +Y+ +++ + ++
Sbjct: 396 RNGVCVGRITYTGMIDGLCKNGFLDEAVVMLNEMSKDGIDPDIVTYSALINGFCRVGRLK 455
Query: 359 GAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIM 418
A++ R+ + G PN I Y TLI ++ L++ + IY+ M + G P+ F ++
Sbjct: 456 TAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKETIRIYEAMILEGNTPDHFTFNVLV 515
Query: 419 DAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNE 478
+ K A + + M S G P+ + + L++ ++ E +A + +
Sbjct: 516 TSLCKAGKVAEAEEFMRCMTSDGILPNAVSFDCLINGYGSSGEGLKAFSVFDEMTKVGHH 575
Query: 479 P 479
P
Sbjct: 576 P 576
Score = 125 bits (313), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 85/320 (26%), Positives = 148/320 (46%), Gaps = 8/320 (2%)
Query: 129 PSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEV 188
PSV L+ Y R G +++ IFR M G PS T IL V++ E V
Sbjct: 123 PSVFD--ILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSIVKSC---EDVSV 177
Query: 189 FMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSF 248
+ L + K + PD F+++I + G ++K+ L M + G + VTYN+++ +
Sbjct: 178 WSFLKEMLKRKICPDVATFNILINVLCAEGSFKKSSYLMQKMEKSGYAPTIVTYNTVLHW 237
Query: 249 ---ETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPT 305
+ +K ++ D M G+ DV +Y +LI+ ++ R + + +M + P
Sbjct: 238 YCKKGRFKAAIELLDHMNLKGVNADVCTYNMLIHDLCRSNRSAKGYLLLRDMRKRMIHPN 297
Query: 306 HKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFR 365
YN LL+ F+ G V AR + M SP+ ++ ++ +++ + + A K F
Sbjct: 298 EVTYNTLLNGFSNEGKVLIARQLLNEMLTFGLSPNHVTFNALIDGHISEGNFKEALKMFH 357
Query: 366 RLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNK 425
++ G + ++YG L+ G K + Y +M+ NG+ + +T ++D KN
Sbjct: 358 MMEAKGLIGTEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNG 417
Query: 426 DFDSAVVWYKEMESCGFPPD 445
D AVV EM G PD
Sbjct: 418 FLDEAVVMLNEMSKDGIDPD 437
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 87/402 (21%), Positives = 171/402 (42%), Gaps = 53/402 (13%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
+I K G ++A +L+ M+K G P +V+++AL+ + R GR K A+ I R+ G
Sbjct: 409 MIDGLCKNGFLDEAVVMLNEMSKDGIDPDIVTYSALINGFCRVGRLKTAKEIVCRIYRVG 468
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
P+ + Y ++ KE ++ ++ E +P D F++++ KAG
Sbjct: 469 LSPNGIIYSTLIYNCCRMGCLKETIRIYEAMILEGNTP---DHFTFNVLVTSLCKAGKVA 525
Query: 222 KARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSK---IYDQMQRAGLQPDVVSYA--- 275
+A + M G+ + V+++ L++ + E K ++D+M + G P +Y
Sbjct: 526 EAEEFMRCMTSDGILPNAVSFDCLINGYGSSGEGLKAFSVFDEMTKVGHHPTFFTYGSLL 585
Query: 276 --------------------------------LLINAYGKARREEEALAVFEEMLDAGVR 303
LI A K+ ++A+++F EM+ +
Sbjct: 586 KGLCKGGHLIAAEKFLKSLQNVPAAVDTVMCNTLITAMCKSGNLDKAVSLFGEMVQRSIL 645
Query: 304 PTHKAYNILLDAFAISGMVDQARTVFKCM------RRDRCSPDICSYTTMLSAYVNASDM 357
P Y L ISG+ + +TV + R P+ YT + A
Sbjct: 646 PDSFTYTSL-----ISGLCRKGKTVIAILFAKEAEARGNLVPNKVMYTCFVDGMFKAGQW 700
Query: 358 EGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTI 417
+ F +++ + G +V+T +I GY+++ +EK ++ +M PN T + +
Sbjct: 701 KAGFYFRQQMDKLGLTRDVVTTNAMIDGYSRMGKIEKTHDLLFEMGNQNQGPNLTTYNIL 760
Query: 418 MDAYGKNKDFDSAVVWYKEMESCGFPPDQ-KAKNILLSLAKT 458
+ Y K K ++ + Y+ M G PD+ +I+L + ++
Sbjct: 761 LHGYSKRKHVSTSFMLYRSMILSGILPDKLTCYSIILGICES 802
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 80/351 (22%), Positives = 159/351 (45%), Gaps = 8/351 (2%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + F LI + +G+F +A K+ M KG + VS+ L++ + + A +
Sbjct: 332 NHVTFNALIDGHISEGNFKEALKMFHMMEAKGLIGTEVSYGVLLDGLCKNAEFDLARGFY 391
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDE-EKSPLKPDQKMFHMMIYM 213
RM+ +G +TY ++ + EA + +L+E K + PD + +I
Sbjct: 392 MRMKRNGVCVGRITYTGMIDGLCKNGFLDEA----VVMLNEMSKDGIDPDIVTYSALING 447
Query: 214 YKKAGGYEKARKLFALMAERGVQQSTVTYNSLM---SFETNYKEVSKIYDQMQRAGLQPD 270
+ + G + A+++ + G+ + + Y++L+ KE +IY+ M G PD
Sbjct: 448 FCRVGRLKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKETIRIYEAMILEGNTPD 507
Query: 271 VVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFK 330
++ +L+ + KA + EA M G+ P +++ L++ + SG +A +VF
Sbjct: 508 HFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNAVSFDCLINGYGSSGEGLKAFSVFD 567
Query: 331 CMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVN 390
M + P +Y ++L + AEKF + L+ + + TLI K
Sbjct: 568 EMTKVGHHPTFFTYGSLLKGLCKGGHLIAAEKFLKSLQNVPAAVDTVMCNTLITAMCKSG 627
Query: 391 NLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCG 441
NL+K + ++ +M I P+ +T+++ + A+++ KE E+ G
Sbjct: 628 NLDKAVSLFGEMVQRSILPDSFTYTSLISGLCRKGKTVIAILFAKEAEARG 678
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 72/346 (20%), Positives = 153/346 (44%), Gaps = 9/346 (2%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
+I Y + G K +L M + P++ ++ L+ Y + + ++R M SG
Sbjct: 725 MIDGYSRMGKIEKTHDLLFEMGNQNQGPNLTTYNILLHGYSKRKHVSTSFMLYRSMILSG 784
Query: 162 PRPSALT-YQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGY 220
P LT Y IIL + E+N + ++ + ++ D+ F+M+I G
Sbjct: 785 ILPDKLTCYSIILGI-CESNMLEIGLKILKAFICR---GVEVDRHTFNMLISKCCANGEI 840
Query: 221 EKARKLFALMAERGVQQSTVTYNSLMSF---ETNYKEVSKIYDQMQRAGLQPDVVSYALL 277
A + +M G+ T ++++S ++E + +M + G+ P+ Y L
Sbjct: 841 NWAFDMVNVMTSLGISLDKNTCDAIVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGL 900
Query: 278 INAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRC 337
+N + + A V EEM+ + P + A + ++ A A G D+A + + M + +
Sbjct: 901 LNGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEASLLLRSMLKMKL 960
Query: 338 SPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMME 397
P I S+TT++ + ++ A + + G ++++Y LI G ++ E
Sbjct: 961 VPTIASFTTLMHLFCKNGNVTEALELRVVMSNCGLKLDLVSYNVLITGLCAKGDMAIAFE 1020
Query: 398 IYDKMRVNGIKPNQTIFTTIMDA-YGKNKDFDSAVVWYKEMESCGF 442
++++M+ +G N T + ++ + +F + K++ + GF
Sbjct: 1021 LFEEMKRDGFLANVTTYKALVGGILSQGTEFSGTDIILKDLLARGF 1066
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 89/406 (21%), Positives = 155/406 (38%), Gaps = 43/406 (10%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
+ F +L+T+ K G +AE+ + M G P+ VS L+ YG G A ++F
Sbjct: 507 DHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNAVSFDCLINGYGSSGEGLKAFSVF 566
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
M G P+ TY +LK + AE+ +L + P D M + +I
Sbjct: 567 DEMTKVGHHPTFFTYGSLLKGLCKGGHLIAAEKFLKSL---QNVPAAVDTVMCNTLITAM 623
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSLMS--------------------------- 247
K+G +KA LF M +R + + TY SL+S
Sbjct: 624 CKSGNLDKAVSLFGEMVQRSILPDSFTYTSLISGLCRKGKTVIAILFAKEAEARGNLVPN 683
Query: 248 -----------FETN-YKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFE 295
F+ +K QM + GL DVV+ +I+ Y + + E+ +
Sbjct: 684 KVMYTCFVDGMFKAGQWKAGFYFRQQMDKLGLTRDVVTTNAMIDGYSRMGKIEKTHDLLF 743
Query: 296 EMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNAS 355
EM + P YNILL ++ V + +++ M PD + +++ ++
Sbjct: 744 EMGNQNQGPNLTTYNILLHGYSKRKHVSTSFMLYRSMILSGILPDKLTCYSIILGICESN 803
Query: 356 DMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFT 415
+E K + G + T+ LI + ++ + M GI ++
Sbjct: 804 MLEIGLKILKAFICRGVEVDRHTFNMLISKCCANGEINWAFDMVNVMTSLGISLDKNTCD 863
Query: 416 TIMDAYGKNKDFDSAVVWYKEMESCGFPPD-QKAKNILLSLAKTAD 460
I+ +N F + + EM G P+ +K +L L + D
Sbjct: 864 AIVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLLNGLCRVGD 909
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 79/392 (20%), Positives = 148/392 (37%), Gaps = 42/392 (10%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
LITA K G+ +KA + M ++ P ++T+L+ R G+ A + ++ G
Sbjct: 619 LITAMCKSGNLDKAVSLFGEMVQRSILPDSFTYTSLISGLCRKGKTVIAILFAKEAEARG 678
Query: 162 PR-PSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGY 220
P+ + Y + +A ++K F +K L D + MI Y + G
Sbjct: 679 NLVPNKVMYTCFVDGMFKAGQWKAG---FYFRQQMDKLGLTRDVVTTNAMIDGYSRMGKI 735
Query: 221 EKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSK---IYDQMQRAGLQPDVVSYALL 277
EK L M + + TYN L+ + K VS +Y M +G+ PD ++ +
Sbjct: 736 EKTHDLLFEMGNQNQGPNLTTYNILLHGYSKRKHVSTSFMLYRSMILSGILPDKLTCYSI 795
Query: 278 INAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVD-------------- 323
I ++ E L + + + GV +N+L+ +G ++
Sbjct: 796 ILGICESNMLEIGLKILKAFICRGVEVDRHTFNMLISKCCANGEINWAFDMVNVMTSLGI 855
Query: 324 ---------------------QARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEK 362
++R V M + SP+ Y +L+ D++ A
Sbjct: 856 SLDKNTCDAIVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLLNGLCRVGDIKTAFV 915
Query: 363 FFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYG 422
+ P + +++ AK ++ + M + P FTT+M +
Sbjct: 916 VKEEMIAHKICPPNVAESAMVRALAKCGKADEASLLLRSMLKMKLVPTIASFTTLMHLFC 975
Query: 423 KNKDFDSAVVWYKEMESCGFPPDQKAKNILLS 454
KN + A+ M +CG D + N+L++
Sbjct: 976 KNGNVTEALELRVVMSNCGLKLDLVSYNVLIT 1007
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 43/197 (21%), Positives = 80/197 (40%)
Query: 257 KIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAF 316
+I+ M G P V + ++ + K+ + + +EML + P +NIL++
Sbjct: 144 EIFRLMGLYGFNPSVYTCNAILGSIVKSCEDVSVWSFLKEMLKRKICPDVATFNILINVL 203
Query: 317 AISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNV 376
G ++ + + M + +P I +Y T+L Y + A + + G +V
Sbjct: 204 CAEGSFKKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMNLKGVNADV 263
Query: 377 ITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKE 436
TY LI + N K + MR I PN+ + T+++ + A E
Sbjct: 264 CTYNMLIHDLCRSNRSAKGYLLLRDMRKRMIHPNEVTYNTLLNGFSNEGKVLIARQLLNE 323
Query: 437 MESCGFPPDQKAKNILL 453
M + G P+ N L+
Sbjct: 324 MLTFGLSPNHVTFNALI 340
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 51/280 (18%), Positives = 118/280 (42%), Gaps = 26/280 (9%)
Query: 205 KMFHMMIYMYKKAGGYEKARKLF---ALMAERGVQQSTVTYNSLMSFETNYKEVSKIYDQ 261
++F + ++ +A Y+ AR + +LM+ + S+ + +LM+ Y+ +
Sbjct: 73 QLFCITTHILVRARMYDPARHILKELSLMSGK----SSFVFGALMA---TYRLCNS---- 121
Query: 262 MQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGM 321
P V + +LI Y + +++L +F M G P+ N +L + S
Sbjct: 122 ------NPSV--FDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSIVKSCE 173
Query: 322 VDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGT 381
+ K M + + PD+ ++ +++ + + +++++ G+ P ++TY T
Sbjct: 174 DVSVWSFLKEMLKRKICPDVATFNILINVLCAEGSFKKSSYLMQKMEKSGYAPTIVTYNT 233
Query: 382 LIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCG 441
++ Y K + +E+ D M + G+ + + ++ ++ + ++M
Sbjct: 234 VLHWYCKKGRFKAAIELLDHMNLKGVNADVCTYNMLIHDLCRSNRSAKGYLLLRDMRKRM 293
Query: 442 FPPDQKAKNILLSL----AKTADERNEANELLGNFNHPNN 477
P++ N LL+ K R NE+L PN+
Sbjct: 294 IHPNEVTYNTLLNGFSNEGKVLIARQLLNEMLTFGLSPNH 333
>gi|449520323|ref|XP_004167183.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
mitochondrial-like [Cucumis sativus]
Length = 605
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 97/379 (25%), Positives = 182/379 (48%), Gaps = 6/379 (1%)
Query: 118 VLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFV 177
V++ + ++GY P +V++T L++ R A +F RMQ G P+A+TY ++K
Sbjct: 153 VMAGILRRGYIPDIVTYTTLIKGLCMEHRISKAALLFTRMQKLGCTPNAITYGTLMKGLC 212
Query: 178 EANKFKEAEEVFMTLLDEEK---SPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERG 234
A ++ +L++ KP + ++I K ++AR LF M +G
Sbjct: 213 RTGNISIALKLHQEMLNDSSLYGINFKPVVISYSIIIDALCKDRREDEARDLFEEMKVQG 272
Query: 235 VQQSTVTYNSLM---SFETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEAL 291
+ + ++Y SL+ ++E +++++M G+QP+VV++ +LI+ K + EA
Sbjct: 273 MTPTVISYTSLIHGFCCGGKWEEAKRLFNEMVNQGVQPNVVTFNVLIDVLCKEGKVIEAK 332
Query: 292 AVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAY 351
+ E M+ G+ P YN L++ F + G ++ AR +F M C PD+ YT +++ Y
Sbjct: 333 DLLEVMIQRGIVPNLLTYNSLIEGFCLVGDLNSARELFVSMPSKGCEPDVICYTVLINGY 392
Query: 352 VNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQ 411
S +E A K + + Q G P+V TYG L+ G + + +++ M+V GI +
Sbjct: 393 CKTSKVEEAMKLYNGMLQVGKRPDVKTYGALLTGLFQGGKVGDAKKLFGVMKVYGIPGDL 452
Query: 412 TIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGN 471
I+ ++ KN A+ + +++S D + N L+ A + A EL
Sbjct: 453 YIYGIFLNGLCKNGCLFEAMELFNKLKSYNIKLDIECFNCLIDGLCKAGKLETAWELFEK 512
Query: 472 FNHPNNEPGINGLSISVDE 490
+P + +I + E
Sbjct: 513 LPQEELQPDVVTYNIMIHE 531
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 99/422 (23%), Positives = 196/422 (46%), Gaps = 15/422 (3%)
Query: 35 MNQIEEVGSAVAVLRSERTRGQPLPKDLVLGTLVRLKQLKKWNVVSEVLEWLRIQSW-WD 93
+ + VG +AV+ RG +P + TL++ + + L + R+Q
Sbjct: 141 LCNVNRVGEGLAVMAGILRRGY-IPDIVTYTTLIK-GLCMEHRISKAALLFTRMQKLGCT 198
Query: 94 FNEMDFLMLITAYGKQGDFNKAEKVL------SFMNKKGYAPSVVSHTALMEAYGRGGRY 147
N + + L+ + G+ + A K+ S + + P V+S++ +++A + R
Sbjct: 199 PNAITYGTLMKGLCRTGNISIALKLHQEMLNDSSLYGINFKPVVISYSIIIDALCKDRRE 258
Query: 148 KNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMF 207
A +F M+ G P+ ++Y ++ F K++EA+ +F ++++ ++P+ F
Sbjct: 259 DEARDLFEEMKVQGMTPTVISYTSLIHGFCCGGKWEEAKRLFNEMVNQG---VQPNVVTF 315
Query: 208 HMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLM---SFETNYKEVSKIYDQMQR 264
+++I + K G +A+ L +M +RG+ + +TYNSL+ + +++ M
Sbjct: 316 NVLIDVLCKEGKVIEAKDLLEVMIQRGIVPNLLTYNSLIEGFCLVGDLNSARELFVSMPS 375
Query: 265 AGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQ 324
G +PDV+ Y +LIN Y K + EEA+ ++ ML G RP K Y LL G V
Sbjct: 376 KGCEPDVICYTVLINGYCKTSKVEEAMKLYNGMLQVGKRPDVKTYGALLTGLFQGGKVGD 435
Query: 325 ARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIK 384
A+ +F M+ D+ Y L+ + A + F +LK ++ + LI
Sbjct: 436 AKKLFGVMKVYGIPGDLYIYGIFLNGLCKNGCLFEAMELFNKLKSYNIKLDIECFNCLID 495
Query: 385 GYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPP 444
G K LE E+++K+ ++P+ + ++ + + A + +++ME G P
Sbjct: 496 GLCKAGKLETAWELFEKLPQEELQPDVVTYNIMIHEFCRGGQVVKANILFQKMEKNGCTP 555
Query: 445 DQ 446
D+
Sbjct: 556 DK 557
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 91/352 (25%), Positives = 156/352 (44%), Gaps = 12/352 (3%)
Query: 128 APSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEE 187
P + S T L+ + Y ++ +M+ SG P T I+L N+ E
Sbjct: 93 TPPLSSFTHLLSGLAKIKHYSQVFYLYNQMRLSGISPDCCTLNILLNCLCNVNRVGEGLA 152
Query: 188 VFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMS 247
V +L + PD + +I KA LF M + G + +TY +LM
Sbjct: 153 VMAGIL---RRGYIPDIVTYTTLIKGLCMEHRISKAALLFTRMQKLGCTPNAITYGTLMK 209
Query: 248 FETNYKEVS---KIYDQMQR------AGLQPDVVSYALLINAYGKARREEEALAVFEEML 298
+S K++ +M +P V+SY+++I+A K RRE+EA +FEEM
Sbjct: 210 GLCRTGNISIALKLHQEMLNDSSLYGINFKPVVISYSIIIDALCKDRREDEARDLFEEMK 269
Query: 299 DAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDME 358
G+ PT +Y L+ F G ++A+ +F M P++ ++ ++ +
Sbjct: 270 VQGMTPTVISYTSLIHGFCCGGKWEEAKRLFNEMVNQGVQPNVVTFNVLIDVLCKEGKVI 329
Query: 359 GAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIM 418
A+ + Q G VPN++TY +LI+G+ V +L E++ M G +P+ +T ++
Sbjct: 330 EAKDLLEVMIQRGIVPNLLTYNSLIEGFCLVGDLNSARELFVSMPSKGCEPDVICYTVLI 389
Query: 419 DAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLG 470
+ Y K + A+ Y M G PD K LL+ + +A +L G
Sbjct: 390 NGYCKTSKVEEAMKLYNGMLQVGKRPDVKTYGALLTGLFQGGKVGDAKKLFG 441
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 89/406 (21%), Positives = 186/406 (45%), Gaps = 51/406 (12%)
Query: 43 SAVAVLRSERTRGQPLPKDLVLGTLVRLKQLKKWNVVSEVL----EWLRIQSWWDFN--- 95
S A+L + + P + GTL +K L + +S L E L S + N
Sbjct: 183 SKAALLFTRMQKLGCTPNAITYGTL--MKGLCRTGNISIALKLHQEMLNDSSLYGINFKP 240
Query: 96 -EMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
+ + ++I A K ++A + M +G P+V+S+T+L+ + GG+++ A+ +F
Sbjct: 241 VVISYSIIIDALCKDRREDEARDLFEEMKVQGMTPTVISYTSLIHGFCCGGKWEEAKRLF 300
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
M + G +P+ +T+ +++ + + K EA+++ ++ + P+ ++ +I +
Sbjct: 301 NEMVNQGVQPNVVTFNVLIDVLCKEGKVIEAKDLLEVMIQRG---IVPNLLTYNSLIEGF 357
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSLMSF---ETNYKEVSKIYDQMQRAGLQPDV 271
G AR+LF M +G + + Y L++ + +E K+Y+ M + G +PDV
Sbjct: 358 CLVGDLNSARELFVSMPSKGCEPDVICYTVLINGYCKTSKVEEAMKLYNGMLQVGKRPDV 417
Query: 272 VSYALLI-----------------------------------NAYGKARREEEALAVFEE 296
+Y L+ N K EA+ +F +
Sbjct: 418 KTYGALLTGLFQGGKVGDAKKLFGVMKVYGIPGDLYIYGIFLNGLCKNGCLFEAMELFNK 477
Query: 297 MLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASD 356
+ ++ + +N L+D +G ++ A +F+ + ++ PD+ +Y M+ +
Sbjct: 478 LKSYNIKLDIECFNCLIDGLCKAGKLETAWELFEKLPQEELQPDVVTYNIMIHEFCRGGQ 537
Query: 357 MEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKM 402
+ A F++++++G P+ ITY TLI+G+ + LEK++E+ M
Sbjct: 538 VVKANILFQKMEKNGCTPDKITYATLIRGFFESKKLEKVVELLHMM 583
Score = 108 bits (271), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 66/279 (23%), Positives = 139/279 (49%), Gaps = 8/279 (2%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + F +LI K+G +A+ +L M ++G P+++++ +L+E + G +A +F
Sbjct: 311 NVVTFNVLIDVLCKEGKVIEAKDLLEVMIQRGIVPNLLTYNSLIEGFCLVGDLNSARELF 370
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
M S G P + Y +++ + + +K +EA +++ +L K +PD K + ++
Sbjct: 371 VSMPSKGCEPDVICYTVLINGYCKTSKVEEAMKLYNGMLQVGK---RPDVKTYGALLTGL 427
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTY----NSLMSFETNYKEVSKIYDQMQRAGLQPD 270
+ G A+KLF +M G+ Y N L + E +++++++ ++ D
Sbjct: 428 FQGGKVGDAKKLFGVMKVYGIPGDLYIYGIFLNGLCKNGCLF-EAMELFNKLKSYNIKLD 486
Query: 271 VVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFK 330
+ + LI+ KA + E A +FE++ ++P YNI++ F G V +A +F+
Sbjct: 487 IECFNCLIDGLCKAGKLETAWELFEKLPQEELQPDVVTYNIMIHEFCRGGQVVKANILFQ 546
Query: 331 CMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQ 369
M ++ C+PD +Y T++ + + +E + + Q
Sbjct: 547 KMEKNGCTPDKITYATLIRGFFESKKLEKVVELLHMMVQ 585
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/239 (23%), Positives = 107/239 (44%), Gaps = 6/239 (2%)
Query: 257 KIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAF 316
+ + M + P + S+ L++ K + + ++ +M +G+ P NILL+
Sbjct: 82 QFFHLMMYSNPTPPLSSFTHLLSGLAKIKHYSQVFYLYNQMRLSGISPDCCTLNILLNCL 141
Query: 317 AISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNV 376
V + V + R PDI +YTT++ + A F R+++ G PN
Sbjct: 142 CNVNRVGEGLAVMAGILRRGYIPDIVTYTTLIKGLCMEHRISKAALLFTRMQKLGCTPNA 201
Query: 377 ITYGTLIKGYAKVNNLEKMMEIYDKM----RVNGI--KPNQTIFTTIMDAYGKNKDFDSA 430
ITYGTL+KG + N+ ++++ +M + GI KP ++ I+DA K++ D A
Sbjct: 202 ITYGTLMKGLCRTGNISIALKLHQEMLNDSSLYGINFKPVVISYSIIIDALCKDRREDEA 261
Query: 431 VVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGINGLSISVD 489
++EM+ G P + L+ + EA L + +P + ++ +D
Sbjct: 262 RDLFEEMKVQGMTPTVISYTSLIHGFCCGGKWEEAKRLFNEMVNQGVQPNVVTFNVLID 320
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/100 (24%), Positives = 51/100 (51%)
Query: 99 FLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQ 158
F LI K G A ++ + ++ P VV++ ++ + RGG+ A +F++M+
Sbjct: 490 FNCLIDGLCKAGKLETAWELFEKLPQEELQPDVVTYNIMIHEFCRGGQVVKANILFQKME 549
Query: 159 SSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKS 198
+G P +TY +++ F E+ K ++ E+ ++ + S
Sbjct: 550 KNGCTPDKITYATLIRGFFESKKLEKVVELLHMMVQRDVS 589
>gi|334188438|ref|NP_200395.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332009303|gb|AED96686.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 1136
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 97/396 (24%), Positives = 188/396 (47%), Gaps = 12/396 (3%)
Query: 63 VLGTLVRLKQ-LKKWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSF 121
+LG++V+ + + W+ + E+L+ FN +LI +G F K+ ++
Sbjct: 204 ILGSVVKSGEDVSVWSFLKEMLKRKICPDVATFN-----ILINVLCAEGSFEKSSYLMQK 258
Query: 122 MNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANK 181
M K GYAP++V++ ++ Y + GR+K A + M+S G TY +++ +N+
Sbjct: 259 MEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNR 318
Query: 182 FKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVT 241
+ ++ L D K + P++ ++ +I + G A +L M G+ + VT
Sbjct: 319 IAKG---YLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVT 375
Query: 242 YNSLMS---FETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEML 298
+N+L+ E N+KE K++ M+ GL P VSY +L++ K + A + M
Sbjct: 376 FNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMK 435
Query: 299 DAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDME 358
GV Y ++D +G +D+A + M +D PDI +Y+ +++ + +
Sbjct: 436 RNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFK 495
Query: 359 GAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIM 418
A++ R+ + G PN I Y TLI ++ L++ + IY+ M + G + F ++
Sbjct: 496 TAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLV 555
Query: 419 DAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLS 454
+ K A + + M S G P+ + + L++
Sbjct: 556 TSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLIN 591
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 87/396 (21%), Positives = 173/396 (43%), Gaps = 7/396 (1%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
+E+ + +L+ K +F+ A M + G +++T +++ + G A +
Sbjct: 407 SEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLL 466
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
M G P +TY ++ F + +FK A+E+ + + L P+ ++ +IY
Sbjct: 467 NEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIY---RVGLSPNGIIYSTLIYNC 523
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSK---IYDQMQRAGLQPDV 271
+ G ++A +++ M G + T+N L++ +V++ M G+ P+
Sbjct: 524 CRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNT 583
Query: 272 VSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKC 331
VS+ LIN YG + +A +VF+EM G PT Y LL G + +A K
Sbjct: 584 VSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKS 643
Query: 332 MRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNN 391
+ + D Y T+L+A + ++ A F + Q +P+ TY +LI G +
Sbjct: 644 LHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGK 703
Query: 392 LEKMMEIYDKMRVNG-IKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKN 450
+ + G + PN+ ++T +D K + + + + ++M++ G PD N
Sbjct: 704 TVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTN 763
Query: 451 ILLSLAKTADERNEANELLGNFNHPNNEPGINGLSI 486
++ + + N+LL + N P + +I
Sbjct: 764 AMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNI 799
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 91/367 (24%), Positives = 174/367 (47%), Gaps = 14/367 (3%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
NE+ + LI + +G A ++L+ M G +P+ V+ AL++ + G +K A +F
Sbjct: 337 NEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMF 396
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
M++ G PS ++Y ++L + +F A +M + +++ + + + MI
Sbjct: 397 YMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRM---KRNGVCVGRITYTGMIDGL 453
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSLMS-------FETNYKEVSKIYDQMQRAGL 267
K G ++A L M++ G+ VTY++L++ F+T + V +IY R GL
Sbjct: 454 CKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIY----RVGL 509
Query: 268 QPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQART 327
P+ + Y+ LI + +EA+ ++E M+ G H +N+L+ + +G V +A
Sbjct: 510 SPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEE 569
Query: 328 VFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYA 387
+CM D P+ S+ +++ Y N+ + A F + + G P TYG+L+KG
Sbjct: 570 FMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLC 629
Query: 388 KVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQK 447
K +L + + + + ++ T++ A K+ + AV + EM PD
Sbjct: 630 KGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSY 689
Query: 448 AKNILLS 454
L+S
Sbjct: 690 TYTSLIS 696
Score = 125 bits (315), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 85/320 (26%), Positives = 150/320 (46%), Gaps = 8/320 (2%)
Query: 129 PSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEV 188
PSV + L+ Y R G +++ IFR M G PS T IL V++ E V
Sbjct: 163 PSV--YDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSG---EDVSV 217
Query: 189 FMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSF 248
+ L + K + PD F+++I + G +EK+ L M + G + VTYN+++ +
Sbjct: 218 WSFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHW 277
Query: 249 ---ETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPT 305
+ +K ++ D M+ G+ DV +Y +LI+ ++ R + + +M + P
Sbjct: 278 YCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPN 337
Query: 306 HKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFR 365
YN L++ F+ G V A + M SP+ ++ ++ +++ + + A K F
Sbjct: 338 EVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFY 397
Query: 366 RLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNK 425
++ G P+ ++YG L+ G K + Y +M+ NG+ + +T ++D KN
Sbjct: 398 MMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNG 457
Query: 426 DFDSAVVWYKEMESCGFPPD 445
D AVV EM G PD
Sbjct: 458 FLDEAVVLLNEMSKDGIDPD 477
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 87/389 (22%), Positives = 166/389 (42%), Gaps = 52/389 (13%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
+I K G ++A +L+ M+K G P +V+++AL+ + + GR+K A+ I R+ G
Sbjct: 449 MIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVG 508
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
P+ + Y ++ KEA ++ ++ E + D F++++ KAG
Sbjct: 509 LSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTR---DHFTFNVLVTSLCKAGKVA 565
Query: 222 KARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSK---IYDQMQRAGLQP--------- 269
+A + M G+ +TV+++ L++ N E K ++D+M + G P
Sbjct: 566 EAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLL 625
Query: 270 --------------------------DVVSYALLINAYGKARREEEALAVFEEMLDAGVR 303
D V Y L+ A K+ +A+++F EM+ +
Sbjct: 626 KGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSIL 685
Query: 304 PTHKAYNILLDAFAISGMVDQARTVFKCM------RRDRCSPDICSYTTMLSAYVNASDM 357
P Y L ISG+ + +TV + R P+ YT + A
Sbjct: 686 PDSYTYTSL-----ISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQW 740
Query: 358 EGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTI 417
+ F ++ G P+++T +I GY+++ +EK ++ +M PN T + +
Sbjct: 741 KAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNIL 800
Query: 418 MDAYGKNKDFDSAVVWYKEMESCGFPPDQ 446
+ Y K KD ++ + Y+ + G PD+
Sbjct: 801 LHGYSKRKDVSTSFLLYRSIILNGILPDK 829
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 83/351 (23%), Positives = 159/351 (45%), Gaps = 8/351 (2%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + F LI + +G+F +A K+ M KG PS VS+ L++ + + A +
Sbjct: 372 NHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFY 431
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDE-EKSPLKPDQKMFHMMIYM 213
RM+ +G +TY ++ + EA + LL+E K + PD + +I
Sbjct: 432 MRMKRNGVCVGRITYTGMIDGLCKNGFLDEA----VVLLNEMSKDGIDPDIVTYSALING 487
Query: 214 YKKAGGYEKARKLFALMAERGVQQSTVTYNSLM---SFETNYKEVSKIYDQMQRAGLQPD 270
+ K G ++ A+++ + G+ + + Y++L+ KE +IY+ M G D
Sbjct: 488 FCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRD 547
Query: 271 VVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFK 330
++ +L+ + KA + EA M G+ P +++ L++ + SG +A +VF
Sbjct: 548 HFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFD 607
Query: 331 CMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVN 390
M + P +Y ++L + AEKF + L + + Y TL+ K
Sbjct: 608 EMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSG 667
Query: 391 NLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCG 441
NL K + ++ +M I P+ +T+++ + A+++ KE E+ G
Sbjct: 668 NLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARG 718
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 91/427 (21%), Positives = 160/427 (37%), Gaps = 81/427 (18%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
+ F +L+T+ K G +AE+ + M G P+ VS L+ YG G A ++F
Sbjct: 547 DHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVF 606
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
M G P+ TY +LK + +EAE+ +L P D M++ ++
Sbjct: 607 DEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSL---HAVPAAVDTVMYNTLLTAM 663
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSLMS--------------------------- 247
K+G KA LF M +R + + TY SL+S
Sbjct: 664 CKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPN 723
Query: 248 -----------FETN-YKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFE 295
F+ +K +QM G PD+V+ +I+ Y + + E+ +
Sbjct: 724 KVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLP 783
Query: 296 EMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNAS 355
EM + P YNILL Y
Sbjct: 784 EMGNQNGGPNLTTYNILLH-----------------------------------GYSKRK 808
Query: 356 DMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFT 415
D+ + +R + +G +P+ +T +L+ G + N LE ++I G++ ++ F
Sbjct: 809 DVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFN 868
Query: 416 TIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHP 475
++ N + + A K M S G D+ + ++S+ E+ +L H
Sbjct: 869 MLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVL----HE 924
Query: 476 NNEPGIN 482
++ GI+
Sbjct: 925 MSKQGIS 931
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 70/345 (20%), Positives = 149/345 (43%), Gaps = 7/345 (2%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
+I Y + G K +L M + P++ ++ L+ Y + + ++R + +G
Sbjct: 765 MIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNG 824
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
P LT ++ E+N + ++ + ++ D+ F+M+I G
Sbjct: 825 ILPDKLTCHSLVLGICESNMLEIGLKILKAFICR---GVEVDRYTFNMLISKCCANGEIN 881
Query: 222 KARKLFALMAERGVQQSTVTYNSLMSF---ETNYKEVSKIYDQMQRAGLQPDVVSYALLI 278
A L +M G+ T ++++S ++E + +M + G+ P+ Y LI
Sbjct: 882 WAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLI 941
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCS 338
N + + A V EEM+ + P + A + ++ A A G D+A + + M + +
Sbjct: 942 NGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEATLLLRFMLKMKLV 1001
Query: 339 PDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEI 398
P I S+TT++ ++ A + + G ++++Y LI G ++ E+
Sbjct: 1002 PTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDLVSYNVLITGLCAKGDMALAFEL 1061
Query: 399 YDKMRVNGIKPNQTIFTTIMDA-YGKNKDFDSAVVWYKEMESCGF 442
Y++M+ +G N T + ++ + F A + K++ + GF
Sbjct: 1062 YEEMKGDGFLANATTYKALIRGLLARETAFSGADIILKDLLARGF 1106
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 70/335 (20%), Positives = 139/335 (41%), Gaps = 6/335 (1%)
Query: 122 MNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANK 181
M+ G+ P +V+ A+++ Y R G+ + + M + P+ TY I+L + +K
Sbjct: 750 MDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGY---SK 806
Query: 182 FKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVT 241
K+ F+ + + PD+ H ++ ++ E K+ RGV+ T
Sbjct: 807 RKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYT 866
Query: 242 YNSLMSFETNYKEVSKIYDQ---MQRAGLQPDVVSYALLINAYGKARREEEALAVFEEML 298
+N L+S E++ +D M G+ D + +++ + R +E+ V EM
Sbjct: 867 FNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMS 926
Query: 299 DAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDME 358
G+ P + Y L++ G + A V + M + P + + M+ A +
Sbjct: 927 KQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKAD 986
Query: 359 GAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIM 418
A R + + VP + ++ TL+ K N+ + +E+ M G+K + + ++
Sbjct: 987 EATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDLVSYNVLI 1046
Query: 419 DAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILL 453
D A Y+EM+ GF + L+
Sbjct: 1047 TGLCAKGDMALAFELYEEMKGDGFLANATTYKALI 1081
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 45/197 (22%), Positives = 83/197 (42%)
Query: 257 KIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAF 316
+I+ M G P V + ++ + K+ + + +EML + P +NIL++
Sbjct: 184 EIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSFLKEMLKRKICPDVATFNILINVL 243
Query: 317 AISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNV 376
G +++ + + M + +P I +Y T+L Y + A + +K G +V
Sbjct: 244 CAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADV 303
Query: 377 ITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKE 436
TY LI + N + K + MR I PN+ + T+++ + A E
Sbjct: 304 CTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNE 363
Query: 437 MESCGFPPDQKAKNILL 453
M S G P+ N L+
Sbjct: 364 MLSFGLSPNHVTFNALI 380
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/187 (18%), Positives = 82/187 (43%), Gaps = 2/187 (1%)
Query: 268 QPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQART 327
P V Y +LI Y + +++L +F M G P+ N +L + SG +
Sbjct: 162 NPSV--YDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWS 219
Query: 328 VFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYA 387
K M + + PD+ ++ +++ E + +++++ G+ P ++TY T++ Y
Sbjct: 220 FLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYC 279
Query: 388 KVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQK 447
K + +E+ D M+ G+ + + ++ ++ + ++M P++
Sbjct: 280 KKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEV 339
Query: 448 AKNILLS 454
N L++
Sbjct: 340 TYNTLIN 346
>gi|224144580|ref|XP_002325338.1| predicted protein [Populus trichocarpa]
gi|222862213|gb|EEE99719.1| predicted protein [Populus trichocarpa]
Length = 481
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 105/420 (25%), Positives = 194/420 (46%), Gaps = 8/420 (1%)
Query: 53 TRGQPLPKDLVLGTLVR-LKQLKKWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGD 111
+R +P L+R L ++ + S VL+ + + S + + + M++ + K+
Sbjct: 49 SRVNQIPNSTCSTNLIRGLVRIGRIERASRVLKTM-VMSGLVPDVITYNMMVGGFCKRRQ 107
Query: 112 FNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQI 171
A +L M+ G P V+++ ++ + G++ A +R G P + Y I
Sbjct: 108 LRSAIDLLEDMSLSGCPPDVITYNTIIRSLFDNGKFDQAVEFWRGQLRRGCLPYLIPYTI 167
Query: 172 ILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMA 231
+++L + A EV L D PD ++ ++ K G YE A + +
Sbjct: 168 LIELVWKHCGTVRALEV---LEDMAIEGCYPDLVTYNSLVNFASKEGKYEDAALIIYNIL 224
Query: 232 ERGVQQSTVTYNSLMSFETN---YKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREE 288
G++ + +TYNSL+ + + EV +I M++ P VV+Y +LIN K E
Sbjct: 225 SHGMEPNAITYNSLLHSLCSCGLWDEVDEILAIMKKTSHPPTVVTYNILINGLCKCGLVE 284
Query: 289 EALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTML 348
A+ F +M+ P YN LL A GMVD+A VF + CSP + +Y T++
Sbjct: 285 RAINFFVQMVSENCSPDIITYNTLLTALCKEGMVDEALQVFVLLSDSNCSPGLITYNTVI 344
Query: 349 SAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIK 408
M+ A K + ++ + G P+ IT+ +L+ G+ ++ +E +EI +M +
Sbjct: 345 DGLTRRGYMDEALKLYNQMIEKGIAPDGITHRSLVWGFCWIDQVEDAVEILREMGKRDHR 404
Query: 409 PNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANEL 468
N + + +++ +NK D A+ + M S + PD++ + L+ A EA+EL
Sbjct: 405 INSSAYRLVINGLCRNKRVDIAIQVLEMMISGRYKPDEEIYSTLIKSVADAGMVEEADEL 464
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 64/290 (22%), Positives = 139/290 (47%), Gaps = 7/290 (2%)
Query: 81 EVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEA 140
EVLE + I+ + + + + L+ K+G + A ++ + G P+ +++ +L+ +
Sbjct: 183 EVLEDMAIEGCYP-DLVTYNSLVNFASKEGKYEDAALIIYNILSHGMEPNAITYNSLLHS 241
Query: 141 YGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPL 200
G + + I M+ + P+ +TY I++ + + A F+ ++ E SP
Sbjct: 242 LCSCGLWDEVDEILAIMKKTSHPPTVVTYNILINGLCKCGLVERAINFFVQMVSENCSP- 300
Query: 201 KPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETN---YKEVSK 257
D ++ ++ K G ++A ++F L+++ +TYN+++ T E K
Sbjct: 301 --DIITYNTLLTALCKEGMVDEALQVFVLLSDSNCSPGLITYNTVIDGLTRRGYMDEALK 358
Query: 258 IYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFA 317
+Y+QM G+ PD +++ L+ + + E+A+ + EM R AY ++++
Sbjct: 359 LYNQMIEKGIAPDGITHRSLVWGFCWIDQVEDAVEILREMGKRDHRINSSAYRLVINGLC 418
Query: 318 ISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRL 367
+ VD A V + M R PD Y+T++ + +A +E A++ ++L
Sbjct: 419 RNKRVDIAIQVLEMMISGRYKPDEEIYSTLIKSVADAGMVEEADELHQKL 468
Score = 91.7 bits (226), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 65/309 (21%), Positives = 139/309 (44%), Gaps = 6/309 (1%)
Query: 97 MDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRR 156
+ + +LI K +A +VL M +G P +V++ +L+ + G+Y++A I
Sbjct: 163 IPYTILIELVWKHCGTVRALEVLEDMAIEGCYPDLVTYNSLVNFASKEGKYEDAALIIYN 222
Query: 157 MQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKK 216
+ S G P+A+TY +L + E +E+ + +K+ P ++++I K
Sbjct: 223 ILSHGMEPNAITYNSLLHSLCSCGLWDEVDEILAIM---KKTSHPPTVVTYNILINGLCK 279
Query: 217 AGGYEKARKLFALMAERGVQQSTVTYNSLMSF---ETNYKEVSKIYDQMQRAGLQPDVVS 273
G E+A F M +TYN+L++ E E +++ + + P +++
Sbjct: 280 CGLVERAINFFVQMVSENCSPDIITYNTLLTALCKEGMVDEALQVFVLLSDSNCSPGLIT 339
Query: 274 YALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMR 333
Y +I+ + +EAL ++ +M++ G+ P + L+ F V+ A + + M
Sbjct: 340 YNTVIDGLTRRGYMDEALKLYNQMIEKGIAPDGITHRSLVWGFCWIDQVEDAVEILREMG 399
Query: 334 RDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLE 393
+ + +Y +++ ++ A + + + P+ Y TLIK A +E
Sbjct: 400 KRDHRINSSAYRLVINGLCRNKRVDIAIQVLEMMISGRYKPDEEIYSTLIKSVADAGMVE 459
Query: 394 KMMEIYDKM 402
+ E++ K+
Sbjct: 460 EADELHQKL 468
Score = 78.6 bits (192), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 52/236 (22%), Positives = 105/236 (44%)
Query: 254 EVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILL 313
E +K+ D M R P+ LI + R E A V + M+ +G+ P YN+++
Sbjct: 40 EATKLIDIMSRVNQIPNSTCSTNLIRGLVRIGRIERASRVLKTMVMSGLVPDVITYNMMV 99
Query: 314 DAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFV 373
F + A + + M C PD+ +Y T++ + + + A +F+R + G +
Sbjct: 100 GGFCKRRQLRSAIDLLEDMSLSGCPPDVITYNTIIRSLFDNGKFDQAVEFWRGQLRRGCL 159
Query: 374 PNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVW 433
P +I Y LI+ K + +E+ + M + G P+ + ++++ K ++ A +
Sbjct: 160 PYLIPYTILIELVWKHCGTVRALEVLEDMAIEGCYPDLVTYNSLVNFASKEGKYEDAALI 219
Query: 434 YKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGINGLSISVD 489
+ S G P+ N LL + +E +E+L ++ P + +I ++
Sbjct: 220 IYNILSHGMEPNAITYNSLLHSLCSCGLWDEVDEILAIMKKTSHPPTVVTYNILIN 275
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/291 (20%), Positives = 118/291 (40%), Gaps = 3/291 (1%)
Query: 202 PDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSKIYD- 260
P+ +I + G E+A ++ M G+ +TYN ++ +++ D
Sbjct: 55 PNSTCSTNLIRGLVRIGRIERASRVLKTMVMSGLVPDVITYNMMVGGFCKRRQLRSAIDL 114
Query: 261 --QMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAI 318
M +G PDV++Y +I + + ++A+ + L G P Y IL++
Sbjct: 115 LEDMSLSGCPPDVITYNTIIRSLFDNGKFDQAVEFWRGQLRRGCLPYLIPYTILIELVWK 174
Query: 319 SGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVIT 378
+A V + M + C PD+ +Y ++++ E A + G PN IT
Sbjct: 175 HCGTVRALEVLEDMAIEGCYPDLVTYNSLVNFASKEGKYEDAALIIYNILSHGMEPNAIT 234
Query: 379 YGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEME 438
Y +L+ +++ EI M+ P + +++ K + A+ ++ +M
Sbjct: 235 YNSLLHSLCSCGLWDEVDEILAIMKKTSHPPTVVTYNILINGLCKCGLVERAINFFVQMV 294
Query: 439 SCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGINGLSISVD 489
S PD N LL+ +EA ++ + N PG+ + +D
Sbjct: 295 SENCSPDIITYNTLLTALCKEGMVDEALQVFVLLSDSNCSPGLITYNTVID 345
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/147 (24%), Positives = 65/147 (44%)
Query: 310 NILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQ 369
N +L G + +A + M R P+ T ++ V +E A + + +
Sbjct: 26 NEILHNLCKKGSLMEATKLIDIMSRVNQIPNSTCSTNLIRGLVRIGRIERASRVLKTMVM 85
Query: 370 DGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDS 429
G VP+VITY ++ G+ K L +++ + M ++G P+ + TI+ + N FD
Sbjct: 86 SGLVPDVITYNMMVGGFCKRRQLRSAIDLLEDMSLSGCPPDVITYNTIIRSLFDNGKFDQ 145
Query: 430 AVVWYKEMESCGFPPDQKAKNILLSLA 456
AV +++ G P IL+ L
Sbjct: 146 AVEFWRGQLRRGCLPYLIPYTILIELV 172
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/249 (21%), Positives = 103/249 (41%), Gaps = 41/249 (16%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + + L+ + G +++ +++L+ M K + P+VV++ L+ + G + A F
Sbjct: 231 NAITYNSLLHSLCSCGLWDEVDEILAIMKKTSHPPTVVTYNILINGLCKCGLVERAINFF 290
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
+M S P +TY +L + EA +VF+ L D SP ++ +I
Sbjct: 291 VQMVSENCSPDIITYNTLLTALCKEGMVDEALQVFVLLSDSNCSP---GLITYNTVIDGL 347
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSLM-SF------------------------E 249
+ G ++A KL+ M E+G+ +T+ SL+ F
Sbjct: 348 TRRGYMDEALKLYNQMIEKGIAPDGITHRSLVWGFCWIDQVEDAVEILREMGKRDHRINS 407
Query: 250 TNYKEVS-------------KIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEE 296
+ Y+ V ++ + M +PD Y+ LI + A EEA + ++
Sbjct: 408 SAYRLVINGLCRNKRVDIAIQVLEMMISGRYKPDEEIYSTLIKSVADAGMVEEADELHQK 467
Query: 297 MLDAGVRPT 305
+++ V T
Sbjct: 468 LIERKVLRT 476
>gi|224130790|ref|XP_002328377.1| predicted protein [Populus trichocarpa]
gi|222838092|gb|EEE76457.1| predicted protein [Populus trichocarpa]
Length = 688
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 86/347 (24%), Positives = 166/347 (47%), Gaps = 6/347 (1%)
Query: 110 GDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTY 169
G N+A ++ M + G P VV++ ++++ + +A M G P +TY
Sbjct: 282 GQLNEATRLFKRMEQNGCKPDVVTYNIIIDSLYKDRLVNDAADFLSEMVDQGIPPDVVTY 341
Query: 170 QIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFAL 229
IL + EA +F + E+ KPD ++ +I K A + +
Sbjct: 342 TTILHGLCYLGQLNEAIRLFKKM---EQKGCKPDVVAYNTIIDSLCKDRLVNDAMEFLSE 398
Query: 230 MAERGVQQSTVTYNSLMSFETNYK---EVSKIYDQMQRAGLQPDVVSYALLINAYGKARR 286
M +RG+ + VTY++++ N E ++++ +M + P+ +++++L++ +
Sbjct: 399 MVDRGIPPNAVTYSTILHGFCNLGQLDEATQLFKEMVGRNVMPNTLTFSILVDGLCQEGM 458
Query: 287 EEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTT 346
EA VFE M + GV P YN L++ + + +++AR VF+ M C+PD+ SY
Sbjct: 459 VSEARWVFETMTEKGVEPNIYTYNALMNGYCLRCKMNEARKVFEIMVGKGCAPDLHSYNI 518
Query: 347 MLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNG 406
+++ Y N+ M+ A+ ++ PN +TY T++KG V L E++ KM +G
Sbjct: 519 LINGYCNSRRMDKAKALLTQMSVKKLTPNTVTYNTIMKGLCYVGRLLDAQELFKKMCSSG 578
Query: 407 IKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILL 453
+ P ++ +++ K+ D A+ +K M+ PD IL+
Sbjct: 579 MLPTLMTYSILLNGLCKHGHLDEALKLFKSMKEKKLEPDIILYTILI 625
Score = 144 bits (364), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 97/398 (24%), Positives = 182/398 (45%), Gaps = 6/398 (1%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + + +I + K N A LS M +G P +++ +++ G+ A +F
Sbjct: 232 NVVTYNTIIDSLCKDRLVNDAMDFLSEMVGRGIPPDAITYNSIVHGLCCLGQLNEATRLF 291
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
+RM+ +G +P +TY II+ + +A + ++D+ + PD + +++
Sbjct: 292 KRMEQNGCKPDVVTYNIIIDSLYKDRLVNDAADFLSEMVDQG---IPPDVVTYTTILHGL 348
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVS---KIYDQMQRAGLQPDV 271
G +A +LF M ++G + V YN+++ + V+ + +M G+ P+
Sbjct: 349 CYLGQLNEAIRLFKKMEQKGCKPDVVAYNTIIDSLCKDRLVNDAMEFLSEMVDRGIPPNA 408
Query: 272 VSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKC 331
V+Y+ +++ + + +EA +F+EM+ V P ++IL+D GMV +AR VF+
Sbjct: 409 VTYSTILHGFCNLGQLDEATQLFKEMVGRNVMPNTLTFSILVDGLCQEGMVSEARWVFET 468
Query: 332 MRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNN 391
M P+I +Y +++ Y M A K F + G P++ +Y LI GY
Sbjct: 469 MTEKGVEPNIYTYNALMNGYCLRCKMNEARKVFEIMVGKGCAPDLHSYNILINGYCNSRR 528
Query: 392 LEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNI 451
++K + +M V + PN + TIM A +K+M S G P +I
Sbjct: 529 MDKAKALLTQMSVKKLTPNTVTYNTIMKGLCYVGRLLDAQELFKKMCSSGMLPTLMTYSI 588
Query: 452 LLSLAKTADERNEANELLGNFNHPNNEPGINGLSISVD 489
LL+ +EA +L + EP I +I ++
Sbjct: 589 LLNGLCKHGHLDEALKLFKSMKEKKLEPDIILYTILIE 626
Score = 142 bits (358), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 101/464 (21%), Positives = 216/464 (46%), Gaps = 15/464 (3%)
Query: 16 VEVFKDAADEAGKKN---WRRLMNQIEE---VGSAVAVLRSERTRGQPLPKDLVLGTLVR 69
V VFK K N + +++ + + V A+ L RG P P + ++V
Sbjct: 218 VHVFKKMEQNGCKPNVVTYNTIIDSLCKDRLVNDAMDFLSEMVGRGIP-PDAITYNSIVH 276
Query: 70 -LKQLKKWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYA 128
L L + N + + + + Q+ + + + ++I + K N A LS M +G
Sbjct: 277 GLCCLGQLNEATRLFKRME-QNGCKPDVVTYNIIIDSLYKDRLVNDAADFLSEMVDQGIP 335
Query: 129 PSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEV 188
P VV++T ++ G+ A +F++M+ G +P + Y I+ + +A E
Sbjct: 336 PDVVTYTTILHGLCYLGQLNEAIRLFKKMEQKGCKPDVVAYNTIIDSLCKDRLVNDAMEF 395
Query: 189 FMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSL--- 245
++D + P+ + +++ + G ++A +LF M R V +T+T++ L
Sbjct: 396 LSEMVDRG---IPPNAVTYSTILHGFCNLGQLDEATQLFKEMVGRNVMPNTLTFSILVDG 452
Query: 246 MSFETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPT 305
+ E E +++ M G++P++ +Y L+N Y + EA VFE M+ G P
Sbjct: 453 LCQEGMVSEARWVFETMTEKGVEPNIYTYNALMNGYCLRCKMNEARKVFEIMVGKGCAPD 512
Query: 306 HKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFR 365
+YNIL++ + S +D+A+ + M + +P+ +Y T++ + A++ F+
Sbjct: 513 LHSYNILINGYCNSRRMDKAKALLTQMSVKKLTPNTVTYNTIMKGLCYVGRLLDAQELFK 572
Query: 366 RLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNK 425
++ G +P ++TY L+ G K +L++ ++++ M+ ++P+ ++T +++
Sbjct: 573 KMCSSGMLPTLMTYSILLNGLCKHGHLDEALKLFKSMKEKKLEPDIILYTILIEGMFIGG 632
Query: 426 DFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELL 469
+ A + ++ + G P + N+++ +EA EL
Sbjct: 633 KLEVAKGLFSKLSADGIQPPGRTYNVMIKGLLKEGLSDEAYELF 676
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 93/410 (22%), Positives = 183/410 (44%), Gaps = 12/410 (2%)
Query: 64 LGTLVRLKQLKKWNVVSEVLEWLRI-QSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFM 122
LG++ ++KQ + ++ + + + N +LI + + A V M
Sbjct: 100 LGSIAKMKQYSTVVYLCNQMDLFGVTHTVYSLN-----ILINCLCRLNHVDFAVSVWGKM 154
Query: 123 NKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKF 182
K G P V++ T L+ G+ K A ++ M SG P ++Y ++ +
Sbjct: 155 FKLGIQPDVITFTTLINGVCNEGKIKVAVELYNEMVRSGHEPDVISYNTLINGLCNSGNT 214
Query: 183 KEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTY 242
A VF + E++ KP+ ++ +I K A + M RG+ +TY
Sbjct: 215 NMAVHVFKKM---EQNGCKPNVVTYNTIIDSLCKDRLVNDAMDFLSEMVGRGIPPDAITY 271
Query: 243 NSL---MSFETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLD 299
NS+ + E ++++ +M++ G +PDVV+Y ++I++ K R +A EM+D
Sbjct: 272 NSIVHGLCCLGQLNEATRLFKRMEQNGCKPDVVTYNIIIDSLYKDRLVNDAADFLSEMVD 331
Query: 300 AGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEG 359
G+ P Y +L G +++A +FK M + C PD+ +Y T++ + +
Sbjct: 332 QGIPPDVVTYTTILHGLCYLGQLNEAIRLFKKMEQKGCKPDVVAYNTIIDSLCKDRLVND 391
Query: 360 AEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMD 419
A +F + G PN +TY T++ G+ + L++ +++ +M + PN F+ ++D
Sbjct: 392 AMEFLSEMVDRGIPPNAVTYSTILHGFCNLGQLDEATQLFKEMVGRNVMPNTLTFSILVD 451
Query: 420 AYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELL 469
+ A ++ M G P+ N L++ + NEA ++
Sbjct: 452 GLCQEGMVSEARWVFETMTEKGVEPNIYTYNALMNGYCLRCKMNEARKVF 501
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 86/378 (22%), Positives = 177/378 (46%), Gaps = 10/378 (2%)
Query: 97 MDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRR 156
+ F LI +G A ++ + M + G+ P V+S+ L+ G A +F++
Sbjct: 164 ITFTTLINGVCNEGKIKVAVELYNEMVRSGHEPDVISYNTLINGLCNSGNTNMAVHVFKK 223
Query: 157 MQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKK 216
M+ +G +P+ +TY I+ + +A + F++ + P PD ++ +++
Sbjct: 224 MEQNGCKPNVVTYNTIIDSLCKDRLVNDAMD-FLSEMVGRGIP--PDAITYNSIVHGLCC 280
Query: 217 AGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKE-----VSKIYDQMQRAGLQPDV 271
G +A +LF M + G + VTYN ++ ++ YK+ + +M G+ PDV
Sbjct: 281 LGQLNEATRLFKRMEQNGCKPDVVTYNIII--DSLYKDRLVNDAADFLSEMVDQGIPPDV 338
Query: 272 VSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKC 331
V+Y +++ + EA+ +F++M G +P AYN ++D+ +V+ A
Sbjct: 339 VTYTTILHGLCYLGQLNEAIRLFKKMEQKGCKPDVVAYNTIIDSLCKDRLVNDAMEFLSE 398
Query: 332 MRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNN 391
M P+ +Y+T+L + N ++ A + F+ + +PN +T+ L+ G +
Sbjct: 399 MVDRGIPPNAVTYSTILHGFCNLGQLDEATQLFKEMVGRNVMPNTLTFSILVDGLCQEGM 458
Query: 392 LEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNI 451
+ + +++ M G++PN + +M+ Y + A ++ M G PD + NI
Sbjct: 459 VSEARWVFETMTEKGVEPNIYTYNALMNGYCLRCKMNEARKVFEIMVGKGCAPDLHSYNI 518
Query: 452 LLSLAKTADERNEANELL 469
L++ + ++A LL
Sbjct: 519 LINGYCNSRRMDKAKALL 536
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 84/364 (23%), Positives = 164/364 (45%), Gaps = 6/364 (1%)
Query: 129 PSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEV 188
PS+V + + + +Y + +M G + + I++ N A V
Sbjct: 91 PSIVEFGKFLGSIAKMKQYSTVVYLCNQMDLFGVTHTVYSLNILINCLCRLNHVDFAVSV 150
Query: 189 FMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSF 248
+ + K ++PD F +I G + A +L+ M G + ++YN+L++
Sbjct: 151 WGKMF---KLGIQPDVITFTTLINGVCNEGKIKVAVELYNEMVRSGHEPDVISYNTLING 207
Query: 249 ETNYKEVS---KIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPT 305
N + ++ +M++ G +P+VV+Y +I++ K R +A+ EM+ G+ P
Sbjct: 208 LCNSGNTNMAVHVFKKMEQNGCKPNVVTYNTIIDSLCKDRLVNDAMDFLSEMVGRGIPPD 267
Query: 306 HKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFR 365
YN ++ G +++A +FK M ++ C PD+ +Y ++ + + A F
Sbjct: 268 AITYNSIVHGLCCLGQLNEATRLFKRMEQNGCKPDVVTYNIIIDSLYKDRLVNDAADFLS 327
Query: 366 RLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNK 425
+ G P+V+TY T++ G + L + + ++ KM G KP+ + TI+D+ K++
Sbjct: 328 EMVDQGIPPDVVTYTTILHGLCYLGQLNEAIRLFKKMEQKGCKPDVVAYNTIIDSLCKDR 387
Query: 426 DFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGINGLS 485
+ A+ + EM G PP+ + +L + +EA +L N P S
Sbjct: 388 LVNDAMEFLSEMVDRGIPPNAVTYSTILHGFCNLGQLDEATQLFKEMVGRNVMPNTLTFS 447
Query: 486 ISVD 489
I VD
Sbjct: 448 ILVD 451
Score = 102 bits (253), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 60/236 (25%), Positives = 110/236 (46%)
Query: 259 YDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAI 318
+ +M R +P +V + + + K ++ + + +M GV T + NIL++
Sbjct: 81 FYRMARMNPRPSIVEFGKFLGSIAKMKQYSTVVYLCNQMDLFGVTHTVYSLNILINCLCR 140
Query: 319 SGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVIT 378
VD A +V+ M + PD+ ++TT+++ N ++ A + + + + G P+VI+
Sbjct: 141 LNHVDFAVSVWGKMFKLGIQPDVITFTTLINGVCNEGKIKVAVELYNEMVRSGHEPDVIS 200
Query: 379 YGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEME 438
Y TLI G N + ++ KM NG KPN + TI+D+ K++ + A+ + EM
Sbjct: 201 YNTLINGLCNSGNTNMAVHVFKKMEQNGCKPNVVTYNTIIDSLCKDRLVNDAMDFLSEMV 260
Query: 439 SCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGINGLSISVDEEDDD 494
G PPD N ++ + NEA L +P + +I +D D
Sbjct: 261 GRGIPPDAITYNSIVHGLCCLGQLNEATRLFKRMEQNGCKPDVVTYNIIIDSLYKD 316
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 55/239 (23%), Positives = 116/239 (48%), Gaps = 6/239 (2%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + F +L+ ++G ++A V M +KG P++ ++ ALM Y + A +F
Sbjct: 442 NTLTFSILVDGLCQEGMVSEARWVFETMTEKGVEPNIYTYNALMNGYCLRCKMNEARKVF 501
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
M G P +Y I++ + + + +A+ + +T + +K L P+ ++ ++
Sbjct: 502 EIMVGKGCAPDLHSYNILINGYCNSRRMDKAKAL-LTQMSVKK--LTPNTVTYNTIMKGL 558
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYK---EVSKIYDQMQRAGLQPDV 271
G A++LF M G+ + +TY+ L++ + E K++ M+ L+PD+
Sbjct: 559 CYVGRLLDAQELFKKMCSSGMLPTLMTYSILLNGLCKHGHLDEALKLFKSMKEKKLEPDI 618
Query: 272 VSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFK 330
+ Y +LI + E A +F ++ G++P + YN+++ G+ D+A +F+
Sbjct: 619 ILYTILIEGMFIGGKLEVAKGLFSKLSADGIQPPGRTYNVMIKGLLKEGLSDEAYELFR 677
Score = 46.6 bits (109), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 37/173 (21%), Positives = 64/173 (36%)
Query: 322 VDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGT 381
VD A F M R P I + L + ++ G V +
Sbjct: 74 VDDALASFYRMARMNPRPSIVEFGKFLGSIAKMKQYSTVVYLCNQMDLFGVTHTVYSLNI 133
Query: 382 LIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCG 441
LI ++N+++ + ++ KM GI+P+ FTT+++ AV Y EM G
Sbjct: 134 LINCLCRLNHVDFAVSVWGKMFKLGIQPDVITFTTLINGVCNEGKIKVAVELYNEMVRSG 193
Query: 442 FPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGINGLSISVDEEDDD 494
PD + N L++ + N A + +P + + +D D
Sbjct: 194 HEPDVISYNTLINGLCNSGNTNMAVHVFKKMEQNGCKPNVVTYNTIIDSLCKD 246
>gi|296083214|emb|CBI22850.3| unnamed protein product [Vitis vinifera]
Length = 724
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 99/411 (24%), Positives = 191/411 (46%), Gaps = 15/411 (3%)
Query: 46 AVLRSERTRGQPLPKDLVLGTLVRLKQLKKWNVVSEVLEWLRIQSWWDFNEMDFLMLITA 105
++ S+ + PL +++ +L ++ + V +L+ ++++ +E F+ +I +
Sbjct: 65 SIANSKSFKHTPLTYQMMIE---KLASEREMDCVQYLLQQMKLEGI-SCSEDLFISVIGS 120
Query: 106 YGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPS 165
Y + G +A K M P+V + +++A R++ I+ M+ G P+
Sbjct: 121 YRRAGSSEQALKTFYRMQDFRVKPTVKIYNHILDALLDENRFQMINPIYSNMKKDGMEPN 180
Query: 166 ALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARK 225
TY I+LK + N+ A ++ L++ PD+ + +I K G ++AR+
Sbjct: 181 VFTYNILLKALCKNNRVDGAHKL---LVEMSSKGCDPDEVSYTTLISSLCKLGKVKEARE 237
Query: 226 LFALMAERGVQQSTVTYNSLMSF---ETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYG 282
L S YN+L++ E ++E ++ D+M G+ P+V+SY +INA
Sbjct: 238 L-----AMSFTPSVPVYNALINGVCKEYTFEEAFQLLDEMMNKGIDPNVISYTTIINALS 292
Query: 283 KARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDIC 342
A E +LAV +M G P + L+ F + G +A + M R+ P++
Sbjct: 293 DAGNVELSLAVLAKMFARGCSPNLHTFTSLIKGFFLKGGSHEALDFWDRMIREGVVPNVV 352
Query: 343 SYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKM 402
+Y ++ + + A F +++ +G PNV TY LI GYAK +L+ E+++ M
Sbjct: 353 AYNALMHGLCSKRSLGDAVSVFNQMEINGCCPNVRTYSALIDGYAKAGDLDGASEVWNWM 412
Query: 403 RVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILL 453
+G PN +T ++D +N F+ A + M+ PP+ N +
Sbjct: 413 ITHGCHPNVVAYTCMVDVLCRNSMFNQAYCLIENMQVENCPPNTVTFNTFI 463
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 103/408 (25%), Positives = 178/408 (43%), Gaps = 30/408 (7%)
Query: 112 FNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQI 171
F + S M K G P+V ++ L++A + R A + M S G P ++Y
Sbjct: 162 FQMINPIYSNMKKDGMEPNVFTYNILLKALCKNNRVDGAHKLLVEMSSKGCDPDEVSYTT 221
Query: 172 ILKLFVEANKFKEAEEVFMT--------------------------LLDEEKSP-LKPDQ 204
++ + K KEA E+ M+ LLDE + + P+
Sbjct: 222 LISSLCKLGKVKEARELAMSFTPSVPVYNALINGVCKEYTFEEAFQLLDEMMNKGIDPNV 281
Query: 205 KMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMS---FETNYKEVSKIYDQ 261
+ +I AG E + + A M RG + T+ SL+ + E +D+
Sbjct: 282 ISYTTIINALSDAGNVELSLAVLAKMFARGCSPNLHTFTSLIKGFFLKGGSHEALDFWDR 341
Query: 262 MQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGM 321
M R G+ P+VV+Y L++ R +A++VF +M G P + Y+ L+D +A +G
Sbjct: 342 MIREGVVPNVVAYNALMHGLCSKRSLGDAVSVFNQMEINGCCPNVRTYSALIDGYAKAGD 401
Query: 322 VDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGT 381
+D A V+ M C P++ +YT M+ S A ++ + PN +T+ T
Sbjct: 402 LDGASEVWNWMITHGCHPNVVAYTCMVDVLCRNSMFNQAYCLIENMQVENCPPNTVTFNT 461
Query: 382 LIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCG 441
IKG ++ ++++D+M +G PN T + ++D+ K++ F A K+ME G
Sbjct: 462 FIKGLCGSGRVDWAIKVFDQMGNSGCFPNTTTYNELLDSLLKDRRFGEAFGLVKDMEHRG 521
Query: 442 FPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGINGLSISVD 489
+ N ++ A EA ELLG +P ++I +D
Sbjct: 522 IELNLVTYNTIIYGYCCAGMLGEALELLGKMVVRGTKPDAITVNIVID 569
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 99/414 (23%), Positives = 197/414 (47%), Gaps = 10/414 (2%)
Query: 70 LKQLKKWNVVSEVLEWLR-IQSWWDFNE--MDFLMLITAYGKQGDFNKAEKVLSFMNKKG 126
LK+LK + ++ LE+ + I + F + + M+I + + + + +L M +G
Sbjct: 47 LKRLKHEHDITLALEYFKSIANSKSFKHTPLTYQMMIEKLASEREMDCVQYLLQQMKLEG 106
Query: 127 YAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAE 186
+ S +++ +Y R G + A F RMQ +P+ Y IL ++ N+F+
Sbjct: 107 ISCSEDLFISVIGSYRRAGSSEQALKTFYRMQDFRVKPTVKIYNHILDALLDENRFQMIN 166
Query: 187 EVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLM 246
++ + +K ++P+ +++++ K + A KL M+ +G V+Y +L+
Sbjct: 167 PIYSNM---KKDGMEPNVFTYNILLKALCKNNRVDGAHKLLVEMSSKGCDPDEVSYTTLI 223
Query: 247 SFETNYKEVSKIYDQMQRA-GLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPT 305
S + ++ K+ + + A P V Y LIN K EEA + +EM++ G+ P
Sbjct: 224 S---SLCKLGKVKEARELAMSFTPSVPVYNALINGVCKEYTFEEAFQLLDEMMNKGIDPN 280
Query: 306 HKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFR 365
+Y +++A + +G V+ + V M CSP++ ++T+++ + A F+
Sbjct: 281 VISYTTIINALSDAGNVELSLAVLAKMFARGCSPNLHTFTSLIKGFFLKGGSHEALDFWD 340
Query: 366 RLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNK 425
R+ ++G VPNV+ Y L+ G +L + ++++M +NG PN ++ ++D Y K
Sbjct: 341 RMIREGVVPNVVAYNALMHGLCSKRSLGDAVSVFNQMEINGCCPNVRTYSALIDGYAKAG 400
Query: 426 DFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEP 479
D D A + M + G P+ A ++ + N+A L+ N N P
Sbjct: 401 DLDGASEVWNWMITHGCHPNVVAYTCMVDVLCRNSMFNQAYCLIENMQVENCPP 454
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 91/400 (22%), Positives = 168/400 (42%), Gaps = 46/400 (11%)
Query: 93 DFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEA 152
D +E+ + LI++ K G +A ++ + PSV + AL+ + ++ A
Sbjct: 213 DPDEVSYTTLISSLCKLGKVKEAREL-----AMSFTPSVPVYNALINGVCKEYTFEEAFQ 267
Query: 153 IFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIY 212
+ M + G P+ ++Y I+ +A + + V + SP + F +I
Sbjct: 268 LLDEMMNKGIDPNVISYTTIINALSDAGNVELSLAVLAKMFARGCSP---NLHTFTSLIK 324
Query: 213 MYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVS---KIYDQMQRAGLQP 269
+ GG +A + M GV + V YN+LM + + + +++QM+ G P
Sbjct: 325 GFFLKGGSHEALDFWDRMIREGVVPNVVAYNALMHGLCSKRSLGDAVSVFNQMEINGCCP 384
Query: 270 DVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVF 329
+V +Y+ LI+ Y KA + A V+ M+ G P AY ++D + M +QA +
Sbjct: 385 NVRTYSALIDGYAKAGDLDGASEVWNWMITHGCHPNVVAYTCMVDVLCRNSMFNQAYCLI 444
Query: 330 KCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPN-------------- 375
+ M+ + C P+ ++ T + + ++ A K F ++ G PN
Sbjct: 445 ENMQVENCPPNTVTFNTFIKGLCGSGRVDWAIKVFDQMGNSGCFPNTTTYNELLDSLLKD 504
Query: 376 ---------------------VITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIF 414
++TY T+I GY L + +E+ KM V G KP+
Sbjct: 505 RRFGEAFGLVKDMEHRGIELNLVTYNTIIYGYCCAGMLGEALELLGKMVVRGTKPDAITV 564
Query: 415 TTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLS 454
++DAY K + A+ + + + PD A L+S
Sbjct: 565 NIVIDAYCKQGKVNIAIQLMDRLSAGKWHPDIIAYTSLIS 604
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 77/364 (21%), Positives = 159/364 (43%), Gaps = 6/364 (1%)
Query: 93 DFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEA 152
D N + + +I A G+ + VL+ M +G +P++ + T+L++ + G A
Sbjct: 278 DPNVISYTTIINALSDAGNVELSLAVLAKMFARGCSPNLHTFTSLIKGFFLKGGSHEALD 337
Query: 153 IFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIY 212
+ RM G P+ + Y ++ +A VF + E + P+ + + +I
Sbjct: 338 FWDRMIREGVVPNVVAYNALMHGLCSKRSLGDAVSVFNQM---EINGCCPNVRTYSALID 394
Query: 213 MYKKAGGYEKARKLFALMAERGVQQSTVTYNSL---MSFETNYKEVSKIYDQMQRAGLQP 269
Y KAG + A +++ M G + V Y + + + + + + + MQ P
Sbjct: 395 GYAKAGDLDGASEVWNWMITHGCHPNVVAYTCMVDVLCRNSMFNQAYCLIENMQVENCPP 454
Query: 270 DVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVF 329
+ V++ I + R + A+ VF++M ++G P YN LLD+ +A +
Sbjct: 455 NTVTFNTFIKGLCGSGRVDWAIKVFDQMGNSGCFPNTTTYNELLDSLLKDRRFGEAFGLV 514
Query: 330 KCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKV 389
K M ++ +Y T++ Y A + A + ++ G P+ IT +I Y K
Sbjct: 515 KDMEHRGIELNLVTYNTIIYGYCCAGMLGEALELLGKMVVRGTKPDAITVNIVIDAYCKQ 574
Query: 390 NNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAK 449
+ +++ D++ P+ +T+++ + + A+V+ + M S G P+
Sbjct: 575 GKVNIAIQLMDRLSAGKWHPDIIAYTSLISGICTHIGVEEAIVYLRRMLSEGISPNVATW 634
Query: 450 NILL 453
N+L+
Sbjct: 635 NVLV 638
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 78/340 (22%), Positives = 147/340 (43%), Gaps = 6/340 (1%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N F LI + +G ++A M ++G P+VV++ ALM +A ++F
Sbjct: 315 NLHTFTSLIKGFFLKGGSHEALDFWDRMIREGVVPNVVAYNALMHGLCSKRSLGDAVSVF 374
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
+M+ +G P+ TY ++ + +A A EV+ ++ P+ + M+ +
Sbjct: 375 NQMEINGCCPNVRTYSALIDGYAKAGDLDGASEVWNWMITHG---CHPNVVAYTCMVDVL 431
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVS---KIYDQMQRAGLQPDV 271
+ + +A L M +TVT+N+ + V K++DQM +G P+
Sbjct: 432 CRNSMFNQAYCLIENMQVENCPPNTVTFNTFIKGLCGSGRVDWAIKVFDQMGNSGCFPNT 491
Query: 272 VSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKC 331
+Y L+++ K RR EA + ++M G+ YN ++ + +GM+ +A +
Sbjct: 492 TTYNELLDSLLKDRRFGEAFGLVKDMEHRGIELNLVTYNTIIYGYCCAGMLGEALELLGK 551
Query: 332 MRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNN 391
M PD + ++ AY + A + RL + P++I Y +LI G
Sbjct: 552 MVVRGTKPDAITVNIVIDAYCKQGKVNIAIQLMDRLSAGKWHPDIIAYTSLISGICTHIG 611
Query: 392 LEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAV 431
+E+ + +M GI PN + ++ N AV
Sbjct: 612 VEEAIVYLRRMLSEGISPNVATWNVLVRHLFSNMGHSGAV 651
>gi|242067353|ref|XP_002448953.1| hypothetical protein SORBIDRAFT_05g002330 [Sorghum bicolor]
gi|241934796|gb|EES07941.1| hypothetical protein SORBIDRAFT_05g002330 [Sorghum bicolor]
Length = 734
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 101/408 (24%), Positives = 183/408 (44%), Gaps = 41/408 (10%)
Query: 99 FLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQ 158
F + +AY K G +KA + + M + G +P+VV++ AL++A + GR +AE F +M
Sbjct: 312 FNIFFSAYAKCGMIDKAMDIFNKMRQHGLSPNVVNYGALIDALCKLGRVDDAEVKFNQMI 371
Query: 159 SSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAG 218
+ G P+ + + ++ +K++ AEE+ +LD+ + P+ F+ +I G
Sbjct: 372 NEGVTPNIVVFNSLVYGLCTVDKWERAEELVYEMLDQ---GICPNAVFFNTLICNLCNVG 428
Query: 219 GYEKARKLFALMAERGVQQSTVTYNSLMS---FETNYKEVSKIYDQMQRAGLQPDVVSYA 275
+ R+L LM GV+ +Y L+S E K++D M GL P V+Y
Sbjct: 429 RVMEGRRLIDLMEHVGVRPDAFSYTPLISGYCLAGRTDEAEKVFDGMVSIGLSPTEVTYN 488
Query: 276 LLINAYGKARREEEALAVFEEMLDAGVRP---THKA------------------------ 308
L++ Y A R ++A +F EML GV P T+
Sbjct: 489 TLLHGYCSASRIDDAYCLFREMLRKGVTPGVVTYNTILHGLFQTKRFSEAKELYLNMINS 548
Query: 309 --------YNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGA 360
YNI+L+ S VD+A +F+ + +I ++T M+ A + E A
Sbjct: 549 GTKCDIYTYNIILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFTIMIGALLKGGRKEDA 608
Query: 361 EKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDA 420
F + +G VPNV+TY + + + +LE+ ++ M NG PN + ++
Sbjct: 609 MDLFAAIPANGLVPNVVTYRLVAENLIEEGSLEEFDSLFSAMEKNGTAPNSQMLNALVRR 668
Query: 421 YGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANEL 468
D A + +++ F + ++L+S+ + + ++ A L
Sbjct: 669 LLHRGDISRAGAYLSKLDERNFSVEASTTSLLISIFTSDEYQHHAKSL 716
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 103/425 (24%), Positives = 186/425 (43%), Gaps = 11/425 (2%)
Query: 61 DLVLGTLVRLKQLKKWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVL- 119
+++G L R+ +LK S L +++ W N++ L+ +A VL
Sbjct: 102 SILIGCLCRMGRLKH----SFATFGLILKTGWRVNDIVINQLLKGLCDGKRVGEAMDVLL 157
Query: 120 SFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPR---PSALTYQIILKLF 176
M + G P VS++ L++ + R + A + R M + R P+ +TY ++
Sbjct: 158 QRMPELGCTPDTVSYSILLKGFCNENRAEEALELLRMMANDHGRSCPPNVVTYTTVIDGL 217
Query: 177 VEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQ 236
+A F AE VF ++D + +KP+ ++ +I+ Y G +++ ++ M+ RG++
Sbjct: 218 CKAQLFDRAEGVFQQMID---NGVKPNNDTYNCLIHGYLSIGKWKEVVQMLEKMSARGLK 274
Query: 237 QSTVTYNSLMSFETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEE 296
TY SL+++ E+ D M GL PD + + +AY K ++A+ +F +
Sbjct: 275 PDCYTYGSLLNYLCALSEMHSFLDLMVENGLSPDHHIFNIFFSAYAKCGMIDKAMDIFNK 334
Query: 297 MLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASD 356
M G+ P Y L+DA G VD A F M + +P+I + +++
Sbjct: 335 MRQHGLSPNVVNYGALIDALCKLGRVDDAEVKFNQMINEGVTPNIVVFNSLVYGLCTVDK 394
Query: 357 MEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTT 416
E AE+ + G PN + + TLI V + + + D M G++P+ +T
Sbjct: 395 WERAEELVYEMLDQGICPNAVFFNTLICNLCNVGRVMEGRRLIDLMEHVGVRPDAFSYTP 454
Query: 417 IMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPN 476
++ Y D A + M S G P + N LL +A ++A L
Sbjct: 455 LISGYCLAGRTDEAEKVFDGMVSIGLSPTEVTYNTLLHGYCSASRIDDAYCLFREMLRKG 514
Query: 477 NEPGI 481
PG+
Sbjct: 515 VTPGV 519
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 80/337 (23%), Positives = 157/337 (46%), Gaps = 6/337 (1%)
Query: 112 FNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQI 171
++ L M + G +P AY + G A IF +M+ G P+ + Y
Sbjct: 290 LSEMHSFLDLMVENGLSPDHHIFNIFFSAYAKCGMIDKAMDIFNKMRQHGLSPNVVNYGA 349
Query: 172 ILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMA 231
++ + + +AE F +++E + P+ +F+ ++Y +E+A +L M
Sbjct: 350 LIDALCKLGRVDDAEVKFNQMINE---GVTPNIVVFNSLVYGLCTVDKWERAEELVYEML 406
Query: 232 ERGVQQSTVTYNSLMSFETNYKEV---SKIYDQMQRAGLQPDVVSYALLINAYGKARREE 288
++G+ + V +N+L+ N V ++ D M+ G++PD SY LI+ Y A R +
Sbjct: 407 DQGICPNAVFFNTLICNLCNVGRVMEGRRLIDLMEHVGVRPDAFSYTPLISGYCLAGRTD 466
Query: 289 EALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTML 348
EA VF+ M+ G+ PT YN LL + + +D A +F+ M R +P + +Y T+L
Sbjct: 467 EAEKVFDGMVSIGLSPTEVTYNTLLHGYCSASRIDDAYCLFREMLRKGVTPGVVTYNTIL 526
Query: 349 SAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIK 408
A++ + + G ++ TY ++ G K N +++ +++ + G++
Sbjct: 527 HGLFQTKRFSEAKELYLNMINSGTKCDIYTYNIILNGLCKSNCVDEAFKMFQSLCSKGLQ 586
Query: 409 PNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPD 445
N FT ++ A K + A+ + + + G P+
Sbjct: 587 LNIITFTIMIGALLKGGRKEDAMDLFAAIPANGLVPN 623
>gi|326513552|dbj|BAJ87795.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 538
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 92/333 (27%), Positives = 163/333 (48%), Gaps = 6/333 (1%)
Query: 99 FLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQ 158
+ +L+ GD +K E V + +K A V ++A++ AY R G + A +F
Sbjct: 206 YTILVDGLSTAGDISKVESVFDEIKRKNVAGDVYFYSAVINAYCRAGNVRRASEVFDECV 265
Query: 159 SSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAG 218
+G P+ TY ++ F + + + AE M L D + + +Q +F+ MI Y + G
Sbjct: 266 GNGIEPNERTYGALINGFCKIGQIEAAE---MLLTDMQLRGVGHNQIIFNTMIDGYCRHG 322
Query: 219 GYEKARKLFALMAERGVQQSTVTYNSL---MSFETNYKEVSKIYDQMQRAGLQPDVVSYA 275
+KA ++ A+M G+Q TYN+L + ++ K+ M G++ + VSY
Sbjct: 323 MVDKALEIKAVMERMGIQLDVYTYNTLACGLCRVNRMEDAKKLLHIMTENGVESNYVSYT 382
Query: 276 LLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRD 335
LI+ + K EA +F +M G RP+ YN+++D + SG + +A K M +
Sbjct: 383 TLISIHSKEGDMVEARRLFRDMEGKGSRPSVVTYNVMIDGYIKSGSIREAERFKKEMEKK 442
Query: 336 RCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKM 395
PD+ +Y ++ + ++ A + F +KQ G PNV+ Y LI G AK E+
Sbjct: 443 GLVPDVYTYAALVHGHCVNGKVDVALRLFEEMKQRGAKPNVVAYTALISGLAKEGRSEEA 502
Query: 396 MEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFD 428
+ YD M G+ P+ T+++ ++ + +K D
Sbjct: 503 FQFYDNMLAAGLTPDDTLYSMLVGSLHTDKRKD 535
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 88/374 (23%), Positives = 172/374 (45%), Gaps = 6/374 (1%)
Query: 94 FNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAI 153
N + L+ Y +Q + + +VL M G P+V ++T L++ G E++
Sbjct: 166 LNACCYNPLLDTYTRQKNDARVAEVLKEMESGGVEPTVGTYTILVDGLSTAGDISKVESV 225
Query: 154 FRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYM 213
F ++ Y ++ + A + A EVF + + ++P+++ + +I
Sbjct: 226 FDEIKRKNVAGDVYFYSAVINAYCRAGNVRRASEVFDECVG---NGIEPNERTYGALING 282
Query: 214 YKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSK---IYDQMQRAGLQPD 270
+ K G E A L M RGV + + +N+++ + V K I M+R G+Q D
Sbjct: 283 FCKIGQIEAAEMLLTDMQLRGVGHNQIIFNTMIDGYCRHGMVDKALEIKAVMERMGIQLD 342
Query: 271 VVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFK 330
V +Y L + R E+A + M + GV + +Y L+ + G + +AR +F+
Sbjct: 343 VYTYNTLACGLCRVNRMEDAKKLLHIMTENGVESNYVSYTTLISIHSKEGDMVEARRLFR 402
Query: 331 CMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVN 390
M P + +Y M+ Y+ + + AE+F + +++ G VP+V TY L+ G+
Sbjct: 403 DMEGKGSRPSVVTYNVMIDGYIKSGSIREAERFKKEMEKKGLVPDVYTYAALVHGHCVNG 462
Query: 391 NLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKN 450
++ + ++++M+ G KPN +T ++ K + A +Y M + G PD +
Sbjct: 463 KVDVALRLFEEMKQRGAKPNVVAYTALISGLAKEGRSEEAFQFYDNMLAAGLTPDDTLYS 522
Query: 451 ILLSLAKTADERNE 464
+L+ T ++E
Sbjct: 523 MLVGSLHTDKRKDE 536
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 82/362 (22%), Positives = 162/362 (44%), Gaps = 9/362 (2%)
Query: 101 MLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSS 160
+++ + K G + A ++L M + G + + L++ Y R + + M+S
Sbjct: 138 VVVDGFCKAGRMDDARRLLDEMPRHGVKLNACCYNPLLDTYTRQKNDARVAEVLKEMESG 197
Query: 161 GPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDE-EKSPLKPDQKMFHMMIYMYKKAGG 219
G P+ TY I++ A + E VF DE ++ + D + +I Y +AG
Sbjct: 198 GVEPTVGTYTILVDGLSTAGDISKVESVF----DEIKRKNVAGDVYFYSAVINAYCRAGN 253
Query: 220 YEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSK---IYDQMQRAGLQPDVVSYAL 276
+A ++F G++ + TY +L++ ++ + MQ G+ + + +
Sbjct: 254 VRRASEVFDECVGNGIEPNERTYGALINGFCKIGQIEAAEMLLTDMQLRGVGHNQIIFNT 313
Query: 277 LINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDR 336
+I+ Y + ++AL + M G++ YN L ++ A+ + M +
Sbjct: 314 MIDGYCRHGMVDKALEIKAVMERMGIQLDVYTYNTLACGLCRVNRMEDAKKLLHIMTENG 373
Query: 337 CSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMM 396
+ SYTT++S + DM A + FR ++ G P+V+TY +I GY K ++ +
Sbjct: 374 VESNYVSYTTLISIHSKEGDMVEARRLFRDMEGKGSRPSVVTYNVMIDGYIKSGSIREAE 433
Query: 397 EIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLS-L 455
+M G+ P+ + ++ + N D A+ ++EM+ G P+ A L+S L
Sbjct: 434 RFKKEMEKKGLVPDVYTYAALVHGHCVNGKVDVALRLFEEMKQRGAKPNVVAYTALISGL 493
Query: 456 AK 457
AK
Sbjct: 494 AK 495
Score = 108 bits (271), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 69/259 (26%), Positives = 122/259 (47%), Gaps = 6/259 (2%)
Query: 257 KIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAF 316
++ D+M R G++ + Y L++ Y + + + V +EM GV PT Y IL+D
Sbjct: 154 RLLDEMPRHGVKLNACCYNPLLDTYTRQKNDARVAEVLKEMESGGVEPTVGTYTILVDGL 213
Query: 317 AISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNV 376
+ +G + + +VF ++R + D+ Y+ +++AY A ++ A + F +G PN
Sbjct: 214 STAGDISKVESVFDEIKRKNVAGDVYFYSAVINAYCRAGNVRRASEVFDECVGNGIEPNE 273
Query: 377 ITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKE 436
TYG LI G+ K+ +E + M++ G+ NQ IF T++D Y ++ D A+
Sbjct: 274 RTYGALINGFCKIGQIEAAEMLLTDMQLRGVGHNQIIFNTMIDGYCRHGMVDKALEIKAV 333
Query: 437 MESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGI--NGLSISVDEEDDD 494
ME G D N L + +A +LL H E G+ N +S +
Sbjct: 334 MERMGIQLDVYTYNTLACGLCRVNRMEDAKKLL----HIMTENGVESNYVSYTTLISIHS 389
Query: 495 DDDDEDDDDNIYHDGDGDG 513
+ D + ++ D +G G
Sbjct: 390 KEGDMVEARRLFRDMEGKG 408
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/182 (23%), Positives = 87/182 (47%)
Query: 272 VSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKC 331
+S +++++ + KA R ++A + +EM GV+ YN LLD + + V K
Sbjct: 134 LSASVVVDGFCKAGRMDDARRLLDEMPRHGVKLNACCYNPLLDTYTRQKNDARVAEVLKE 193
Query: 332 MRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNN 391
M P + +YT ++ A D+ E F +K+ +V Y +I Y + N
Sbjct: 194 MESGGVEPTVGTYTILVDGLSTAGDISKVESVFDEIKRKNVAGDVYFYSAVINAYCRAGN 253
Query: 392 LEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNI 451
+ + E++D+ NGI+PN+ + +++ + K ++A + +M+ G +Q N
Sbjct: 254 VRRASEVFDECVGNGIEPNERTYGALINGFCKIGQIEAAEMLLTDMQLRGVGHNQIIFNT 313
Query: 452 LL 453
++
Sbjct: 314 MI 315
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/150 (19%), Positives = 69/150 (46%)
Query: 305 THKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFF 364
T + ++++D F +G +D AR + M R + C Y +L Y + +
Sbjct: 132 TPLSASVVVDGFCKAGRMDDARRLLDEMPRHGVKLNACCYNPLLDTYTRQKNDARVAEVL 191
Query: 365 RRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKN 424
+ ++ G P V TY L+ G + ++ K+ ++D+++ + + ++ +++AY +
Sbjct: 192 KEMESGGVEPTVGTYTILVDGLSTAGDISKVESVFDEIKRKNVAGDVYFYSAVINAYCRA 251
Query: 425 KDFDSAVVWYKEMESCGFPPDQKAKNILLS 454
+ A + E G P+++ L++
Sbjct: 252 GNVRRASEVFDECVGNGIEPNERTYGALIN 281
Score = 41.2 bits (95), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 39/90 (43%), Gaps = 3/90 (3%)
Query: 373 VPNVIT---YGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDS 429
P IT ++ G+ K ++ + D+M +G+K N + ++D Y + K+
Sbjct: 127 CPGCITPLSASVVVDGFCKAGRMDDARRLLDEMPRHGVKLNACCYNPLLDTYTRQKNDAR 186
Query: 430 AVVWYKEMESCGFPPDQKAKNILLSLAKTA 459
KEMES G P IL+ TA
Sbjct: 187 VAEVLKEMESGGVEPTVGTYTILVDGLSTA 216
>gi|15221282|ref|NP_172694.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|122242333|sp|Q0WKV3.1|PPR36_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g12300, mitochondrial; Flags: Precursor
gi|110741411|dbj|BAF02254.1| hypothetical protein [Arabidopsis thaliana]
gi|332190743|gb|AEE28864.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 637
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 92/404 (22%), Positives = 198/404 (49%), Gaps = 6/404 (1%)
Query: 88 IQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRY 147
I+ ++ N + F LI +G ++A +++ M + G+ P +++ L+ G+
Sbjct: 150 IKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKE 209
Query: 148 KNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMF 207
A + +M G +P+A+TY +L + ++ + A E+ + E+ +K D +
Sbjct: 210 AEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKM---EERNIKLDAVKY 266
Query: 208 HMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETN---YKEVSKIYDQMQR 264
++I K G + A LF M +G+ + +TYN L+ N + + +K+ M +
Sbjct: 267 SIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIK 326
Query: 265 AGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQ 324
+ P+VV++++LI+++ K + EA + +EM+ G+ P Y L+D F +D+
Sbjct: 327 RKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDK 386
Query: 325 ARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIK 384
A + M C P+I ++ +++ Y A+ ++ + FR++ G V + +TY TLI+
Sbjct: 387 ANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQ 446
Query: 385 GYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPP 444
G+ ++ L E++ +M + PN + ++D N + + A+ ++++E
Sbjct: 447 GFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMEL 506
Query: 445 DQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGINGLSISV 488
D NI++ A + ++A +L + +PG+ +I +
Sbjct: 507 DIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMI 550
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 84/362 (23%), Positives = 170/362 (46%), Gaps = 6/362 (1%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + + ++ K G A ++L M ++ V ++ +++ + G NA +F
Sbjct: 227 NAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLF 286
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
M+ G + +TY I++ F A ++ + ++ L D K + P+ F ++I +
Sbjct: 287 NEMEMKGITTNIITYNILIGGFCNAGRWDDGAKL---LRDMIKRKINPNVVTFSVLIDSF 343
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSLM---SFETNYKEVSKIYDQMQRAGLQPDV 271
K G +A +L M RG+ T+TY SL+ E + + +++ D M G P++
Sbjct: 344 VKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNI 403
Query: 272 VSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKC 331
++ +LIN Y KA R ++ L +F +M GV YN L+ F G ++ A+ +F+
Sbjct: 404 RTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQE 463
Query: 332 MRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNN 391
M + P+I +Y +L + + E A + F ++++ ++ Y +I G +
Sbjct: 464 MVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASK 523
Query: 392 LEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNI 451
++ +++ + + G+KP + ++ K A + +++ME G PD NI
Sbjct: 524 VDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNI 583
Query: 452 LL 453
L+
Sbjct: 584 LI 585
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 84/365 (23%), Positives = 169/365 (46%), Gaps = 6/365 (1%)
Query: 94 FNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAI 153
+ + + ++I K G + A + + M KG +++++ L+ + GR+ + +
Sbjct: 261 LDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKL 320
Query: 154 FRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYM 213
R M P+ +T+ +++ FV+ K +EAEE+ ++ + PD + +I
Sbjct: 321 LRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHR---GIAPDTITYTSLIDG 377
Query: 214 YKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVS---KIYDQMQRAGLQPD 270
+ K +KA ++ LM +G + T+N L++ + +++ +M G+ D
Sbjct: 378 FCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVAD 437
Query: 271 VVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFK 330
V+Y LI + + + A +F+EM+ V P Y ILLD +G ++A +F+
Sbjct: 438 TVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFE 497
Query: 331 CMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVN 390
+ + + DI Y ++ NAS ++ A F L G P V TY +I G K
Sbjct: 498 KIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKG 557
Query: 391 NLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKN 450
L + ++ KM +G P+ + ++ A+ + D +V +E++ CGF D
Sbjct: 558 PLSEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEELKRCGFSVDASTIK 617
Query: 451 ILLSL 455
+++ +
Sbjct: 618 MVIDM 622
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 88/406 (21%), Positives = 179/406 (44%), Gaps = 6/406 (1%)
Query: 97 MDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRR 156
+DF L +A K ++ + M KG A ++ + + ++ + R + A + +
Sbjct: 89 IDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIMINCFCRCRKLCLAFSAMGK 148
Query: 157 MQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKK 216
+ G P+ +T+ ++ + EA E+ +++ KPD + ++
Sbjct: 149 IIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGH---KPDLITINTLVNGLCL 205
Query: 217 AGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVS---KIYDQMQRAGLQPDVVS 273
+G +A L M E G Q + VTY +++ + + ++ +M+ ++ D V
Sbjct: 206 SGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVK 265
Query: 274 YALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMR 333
Y+++I+ K + A +F EM G+ YNIL+ F +G D + + M
Sbjct: 266 YSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMI 325
Query: 334 RDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLE 393
+ + +P++ +++ ++ ++V + AE+ + + G P+ ITY +LI G+ K N+L+
Sbjct: 326 KRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLD 385
Query: 394 KMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILL 453
K ++ D M G PN F +++ Y K D + +++M G D N L+
Sbjct: 386 KANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLI 445
Query: 454 SLAKTADERNEANELLGNFNHPNNEPGINGLSISVDEEDDDDDDDE 499
+ N A EL P I I +D D+ + ++
Sbjct: 446 QGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEK 491
Score = 72.0 bits (175), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 52/235 (22%), Positives = 109/235 (46%), Gaps = 6/235 (2%)
Query: 86 LRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGG 145
L + D N F +LI Y K + ++ M+ +G V++ L++ + G
Sbjct: 393 LMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELG 452
Query: 146 RYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQK 205
+ A+ +F+ M S P+ +TY+I+L + + ++A E+F + EKS ++ D
Sbjct: 453 KLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKI---EKSKMELDIG 509
Query: 206 MFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSL---MSFETNYKEVSKIYDQM 262
+++++I+ A + A LF + +GV+ TYN + + + E ++ +M
Sbjct: 510 IYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKM 569
Query: 263 QRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFA 317
+ G PD +Y +LI A+ +++ + EE+ G +++D +
Sbjct: 570 EEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEELKRCGFSVDASTIKMVIDMLS 624
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/184 (20%), Positives = 83/184 (45%)
Query: 286 REEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYT 345
+ ++A+ +F +M+ + PT ++ L A A + D + K M + ++ + +
Sbjct: 68 KADDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLS 127
Query: 346 TMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVN 405
M++ + + A ++ + G+ PN IT+ TLI G + + +E+ D+M
Sbjct: 128 IMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEM 187
Query: 406 GIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEA 465
G KP+ T+++ + A++ +M G P+ +L++ + + A
Sbjct: 188 GHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALA 247
Query: 466 NELL 469
ELL
Sbjct: 248 MELL 251
>gi|224713524|gb|ACN62069.1| PPR-814c [Zea mays]
Length = 814
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 92/355 (25%), Positives = 171/355 (48%), Gaps = 6/355 (1%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
++ A K +KAE L M K P+ ++ L+ Y G++K A +F+ M+
Sbjct: 260 VVHALCKARAMDKAEAFLRQMVNKRVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHS 319
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
P +T +++ + K KEA +VF T+ + ++P D +++M+ Y G
Sbjct: 320 ILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNP---DVFSYNIMLNGYATKGCLV 376
Query: 222 KARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSK---IYDQMQRAGLQPDVVSYALLI 278
LF LM G+ T+N L+ N + K I+++M+ G++PDVV+Y +I
Sbjct: 377 DMTDLFDLMLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVI 436
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCS 338
A + + ++A+ F +M+D GV P AYN L+ F G + +A+ + + +
Sbjct: 437 AALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMH 496
Query: 339 PDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEI 398
DI ++++++ + A+ F G P+ + Y L+ GY V +EK + +
Sbjct: 497 LDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYSMLMDGYCLVGKMEKALRV 556
Query: 399 YDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILL 453
+D M GI+PN ++ T+++ Y K D + ++EM G P +I++
Sbjct: 557 FDAMVSAGIEPNVVVYCTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIII 611
Score = 135 bits (339), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 97/364 (26%), Positives = 169/364 (46%), Gaps = 8/364 (2%)
Query: 113 NKAEKVLSFMN---KKGYAPSVVSHTALMEAYGRGGRYKNA-EAIFRRMQSSGPRPSALT 168
++ E L+F + G +++ L+E + R A + + R G P +
Sbjct: 125 HRPELALAFFGQLLRTGLRVNIIIANHLLEGFCEAKRTDEALDILLHRTPELGCVPDVFS 184
Query: 169 YQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFA 228
Y I+LK + K +A+++ + ++ E + P+ ++ +I + K G KA LF
Sbjct: 185 YSILLKSLCDQGKSGQADDL-LRMMAEGGAVCSPNVVAYNTVIDGFFKEGDVNKACDLFK 243
Query: 229 LMAERGVQQSTVTYNSLMSFETNYKEVSK---IYDQMQRAGLQPDVVSYALLINAYGKAR 285
M +RG+ VTYNS++ + + K QM + P+ +Y LI Y
Sbjct: 244 EMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPNNWTYNNLIYGYSSTG 303
Query: 286 REEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYT 345
+ +EA+ VF+EM + P ++L+ + G + +AR VF M +PD+ SY
Sbjct: 304 QWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYN 363
Query: 346 TMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVN 405
ML+ Y + F + DG P+ T+ LIK YA L+K M I+++MR +
Sbjct: 364 IMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDH 423
Query: 406 GIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEA 465
G+KP+ + T++ A + D A+ + +M G PD+ A N L+ T +A
Sbjct: 424 GVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKA 483
Query: 466 NELL 469
EL+
Sbjct: 484 KELI 487
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 89/363 (24%), Positives = 166/363 (45%), Gaps = 11/363 (3%)
Query: 91 WWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNA 150
++ FN +LI AY G +KA + + M G P VV++ ++ A R G+ +A
Sbjct: 394 FYTFN-----VLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDA 448
Query: 151 EAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMM 210
F +M G P Y +++ F +A+E+ +++ + + D F +
Sbjct: 449 MEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMN---NGMHLDIVFFSSI 505
Query: 211 IYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLM---SFETNYKEVSKIYDQMQRAGL 267
I K G A+ +F L G+ V Y+ LM ++ +++D M AG+
Sbjct: 506 INNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGI 565
Query: 268 QPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQART 327
+P+VV Y L+N Y K R +E L++F EML G++P+ Y+I++D +G A+
Sbjct: 566 EPNVVVYCTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFQAGRTVPAKV 625
Query: 328 VFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYA 387
F M + DIC+Y +L + A F+ L+ N+IT T+I G
Sbjct: 626 KFHEMTESGIAMDICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIDGMF 685
Query: 388 KVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQK 447
+ +E+ +++ + + + P+ ++ ++ K + A + M++ G P+ +
Sbjct: 686 QTRRVEEAKDLFASISRSRLVPSVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPNSR 745
Query: 448 AKN 450
N
Sbjct: 746 LLN 748
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 94/441 (21%), Positives = 189/441 (42%), Gaps = 11/441 (2%)
Query: 44 AVAVLRSERTRGQPLPKDLVLGTLVRLKQLKKWNVVSEVLEWLRIQSWWDFNE--MDFLM 101
AV V + R R LP + L L + L K+ + E + + N + +
Sbjct: 308 AVRVFKEMR-RHSILPDVVTLSML--MGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNI 364
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
++ Y +G + M G AP + L++AY G A IF M+ G
Sbjct: 365 MLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHG 424
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
+P +TY+ ++ K +A E F ++D+ + PD+ ++ +I + G
Sbjct: 425 VKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQG---VAPDKYAYNCLIQGFCTHGSLL 481
Query: 222 KARKLFALMAERGVQQSTVTYNSLMSFETNYKEV---SKIYDQMQRAGLQPDVVSYALLI 278
KA++L + + G+ V ++S+++ V I+D GL PD V Y++L+
Sbjct: 482 KAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYSMLM 541
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCS 338
+ Y + E+AL VF+ M+ AG+ P Y L++ + G +D+ ++F+ M +
Sbjct: 542 DGYCLVGKMEKALRVFDAMVSAGIEPNVVVYCTLVNGYCKIGRIDEGLSLFREMLQRGIK 601
Query: 339 PDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEI 398
P Y+ ++ A A+ F + + G ++ TY +++G K ++ + +
Sbjct: 602 PSTILYSIIIDGLFQAGRTVPAKVKFHEMTESGIAMDICTYNIVLRGLFKNRCFDEAIFL 661
Query: 399 YDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKT 458
+ ++R +K N T++D + + + A + + P +I+++
Sbjct: 662 FKELRAMNVKINIITLNTMIDGMFQTRRVEEAKDLFASISRSRLVPSVVTYSIMITNLIK 721
Query: 459 ADERNEANELLGNFNHPNNEP 479
EA ++ + + EP
Sbjct: 722 EGLVEEAEDMFSSMQNAGCEP 742
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 86/326 (26%), Positives = 160/326 (49%), Gaps = 13/326 (3%)
Query: 128 APSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEE 187
+P+ ++ LM+ R R + A A F ++ +G R + + +L+ F EA + EA +
Sbjct: 108 SPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLEGFCEAKRTDEALD 167
Query: 188 VFMTLLDEEKSP---LKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQS--TVTY 242
+ + ++P PD + +++ G +A L +MAE G S V Y
Sbjct: 168 ILL-----HRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAY 222
Query: 243 NSLM-SF--ETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLD 299
N+++ F E + + ++ +M + G+ PD+V+Y +++A KAR ++A A +M++
Sbjct: 223 NTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVN 282
Query: 300 AGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEG 359
V P + YN L+ ++ +G +A VFK MRR PD+ + + ++ + ++
Sbjct: 283 KRVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKE 342
Query: 360 AEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMD 419
A F + G P+V +Y ++ GYA L M +++D M +GI P+ F ++
Sbjct: 343 ARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIK 402
Query: 420 AYGKNKDFDSAVVWYKEMESCGFPPD 445
AY D A++ + EM G PD
Sbjct: 403 AYANCGMLDKAMIIFNEMRDHGVKPD 428
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 106/225 (47%), Gaps = 7/225 (3%)
Query: 267 LQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQAR 326
L P +YA+L++ +A R E ALA F ++L G+R N LL+ F + D+A
Sbjct: 107 LSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLEGFCEAKRTDEAL 166
Query: 327 TVFKCMRRDR---CSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFV--PNVITYGT 381
+ + R C PD+ SY+ +L + + A+ R + + G V PNV+ Y T
Sbjct: 167 DIL--LHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAYNT 224
Query: 382 LIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCG 441
+I G+ K ++ K +++ +M GI P+ + +++ A K + D A + ++M +
Sbjct: 225 VIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKR 284
Query: 442 FPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGINGLSI 486
P+ N L+ + + EA + + P + LS+
Sbjct: 285 VLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSM 329
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/232 (24%), Positives = 104/232 (44%), Gaps = 7/232 (3%)
Query: 233 RGVQQSTVTYNSLMSFETNYKE---VSKIYDQMQRAGLQPDVVSYALLINAYGKARREEE 289
R + ++ TY LM T + Q+ R GL+ +++ L+ + +A+R +E
Sbjct: 105 RVLSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLEGFCEAKRTDE 164
Query: 290 ALAVF-EEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRD--RCSPDICSYTT 346
AL + + G P +Y+ILL + G QA + + M CSP++ +Y T
Sbjct: 165 ALDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAYNT 224
Query: 347 MLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNG 406
++ + D+ A F+ + Q G P+++TY +++ K ++K +M
Sbjct: 225 VIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKR 284
Query: 407 IKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILL-SLAK 457
+ PN + ++ Y + AV +KEM PD ++L+ SL K
Sbjct: 285 VLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCK 336
>gi|410110115|gb|AFV61137.1| pentatricopeptide repeat-containing protein 123, partial [Lippia
hederifolia]
Length = 364
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 95/365 (26%), Positives = 179/365 (49%), Gaps = 37/365 (10%)
Query: 111 DFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQ 170
D++KA + S + + G+ P +V++ A++ +G+ ++ A ++ M+++G P+ +Y
Sbjct: 2 DYSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMKTAGVMPNTTSYS 61
Query: 171 IILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALM 230
+L ++VE KF EA VF + + E K L D ++MI +Y + G ++A KLF M
Sbjct: 62 TLLTMYVENKKFLEALSVF-SEMREIKCLL--DLTTCNIMIDVYGQLGMAKEADKLFWGM 118
Query: 231 AERGVQQSTVTYNSLMSFETN---YKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARRE 287
+ G++ + V+YN+L+ + + E ++ MQR ++ +VV+Y ++ YGK
Sbjct: 119 RKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKSIEQNVVTYNSMMMIYGKTLEH 178
Query: 288 EEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTM 347
E+A + +EM G+ P Y+ ++ + G +D+A +F+ +R D + TM
Sbjct: 179 EKANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQILFQTM 238
Query: 348 LSAY-------------------------------VNASDMEGAEKFFRRLKQDGFVPNV 376
+ AY A +E A FR+ G V ++
Sbjct: 239 IVAYERAGLVAHAKRLLHELKRPDNIPRDTAIHILAGAGRIEEATYVFRQAIDAGEVKDI 298
Query: 377 ITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKE 436
+ +I +K ++E++DKMR G P+ + +++AYGK ++FD A Y E
Sbjct: 299 TVFERMIHLLSKYKKYSNVVEVFDKMRGLGYFPDSDVIAIVLNAYGKLQEFDKANDVYME 358
Query: 437 MESCG 441
M+ G
Sbjct: 359 MQEVG 363
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 73/263 (27%), Positives = 128/263 (48%), Gaps = 3/263 (1%)
Query: 220 YEKARKLFALMAERGVQQSTVTYNSLMSF---ETNYKEVSKIYDQMQRAGLQPDVVSYAL 276
Y KA +F+ + G V YN++++ ++E + +M+ AG+ P+ SY+
Sbjct: 3 YSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMKTAGVMPNTTSYST 62
Query: 277 LINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDR 336
L+ Y + ++ EAL+VF EM + NI++D + GM +A +F MR+
Sbjct: 63 LLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMG 122
Query: 337 CSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMM 396
P++ SY T+L Y +A A FR +++ NV+TY +++ Y K EK
Sbjct: 123 IEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKSIEQNVVTYNSMMMIYGKTLEHEKAN 182
Query: 397 EIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLA 456
+ +M+ GI+PN ++TI+ +GK D A + ++++ S G DQ ++
Sbjct: 183 NLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQILFQTMIVAY 242
Query: 457 KTADERNEANELLGNFNHPNNEP 479
+ A A LL P+N P
Sbjct: 243 ERAGLVAHAKRLLHELKRPDNIP 265
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 59/244 (24%), Positives = 115/244 (47%), Gaps = 6/244 (2%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + + L+ YG F +A + M +K +VV++ ++M YG+ ++ A +
Sbjct: 126 NVVSYNTLLRVYGDAELFGEAIHLFRLMQRKSIEQNVVTYNSMMMIYGKTLEHEKANNLI 185
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
+ MQS G P+++TY I+ ++ + K A +F L S ++ DQ +F MI Y
Sbjct: 186 QEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKL---RSSGVEIDQILFQTMIVAY 242
Query: 215 KKAGGYEKARKLFA-LMAERGVQQSTVTYNSLMSFETNYKEVSKIYDQMQRAGLQPDVVS 273
++AG A++L L + + T + +++ +E + ++ Q AG D+
Sbjct: 243 ERAGLVAHAKRLLHELKRPDNIPRDTAIH--ILAGAGRIEEATYVFRQAIDAGEVKDITV 300
Query: 274 YALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMR 333
+ +I+ K ++ + VF++M G P I+L+A+ D+A V+ M+
Sbjct: 301 FERMIHLLSKYKKYSNVVEVFDKMRGLGYFPDSDVIAIVLNAYGKLQEFDKANDVYMEMQ 360
Query: 334 RDRC 337
C
Sbjct: 361 EVGC 364
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 57/127 (44%)
Query: 355 SDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIF 414
D A F RLK+ GF P+++ Y +I + K + + +M+ G+ PN T +
Sbjct: 1 CDYSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMKTAGVMPNTTSY 60
Query: 415 TTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNH 474
+T++ Y +NK F A+ + EM D NI++ + EA++L
Sbjct: 61 STLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRK 120
Query: 475 PNNEPGI 481
EP +
Sbjct: 121 MGIEPNV 127
>gi|356525427|ref|XP_003531326.1| PREDICTED: pentatricopeptide repeat-containing protein At1g13040,
mitochondrial-like [Glycine max]
Length = 521
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 104/408 (25%), Positives = 185/408 (45%), Gaps = 48/408 (11%)
Query: 92 WDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAE 151
W FN +L L+ +Q A ++ M KG P VVS+T +++A R+ A
Sbjct: 120 WAFNT--YLNLLC---RQNRLETALELFHSMPSKGRDPDVVSYTIIIDALCNAKRFDEAA 174
Query: 152 AIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMI 211
++RR+ G P Y+ + L V + + ++ K +K + +++ +I
Sbjct: 175 KVWRRLIDKGLSPD---YKACVALVVGLCSGGRVDLAYELVVGVIKGGVKVNSLVYNALI 231
Query: 212 YMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSF---ETNYKEVSKIYDQMQRAGLQ 268
+ + G +KA K+ A M+ G VTYN L+++ E E ++ + M+R+G++
Sbjct: 232 DGFCRMGRVDKAMKIKAFMSRTGCVPDLVTYNILLNYCCEEGMVDEAVRLVETMERSGVE 291
Query: 269 PD-----------------------------------VVSYALLINAYGKARREEEALAV 293
PD VVSY +I A+ KARR + +
Sbjct: 292 PDLYSYNELLKGFCKANMVDRAHLMMVERMQTKGMCDVVSYNTVITAFCKARRTRKGYEL 351
Query: 294 FEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVN 353
FEEM G+RP +NIL+DAF G + + M + R PD YT ++
Sbjct: 352 FEEMCGKGIRPDMVTFNILIDAFLREGSTHVVKKLLDEMTKMRVLPDCIFYTAVVDHLCK 411
Query: 354 ASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTI 413
++ A FR + ++G P+VI+Y L+ G+ K + + M ++D+M+ G+ P++
Sbjct: 412 NGKVDVAHSVFRDMVENGVNPDVISYNALLNGFCKTSRVMDAMHLFDEMQSKGLYPDEVT 471
Query: 414 FTTIMDAYGKNKDFDSAV-VWYKEMESCGFPPDQKAKNILLSLAKTAD 460
+ I+ + K A VW + ME GF ++ L++ +++D
Sbjct: 472 YKLIVGGLIRGKKISLACRVWDQMMER-GFTLNRHLSETLVNAIQSSD 518
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 83/358 (23%), Positives = 151/358 (42%), Gaps = 10/358 (2%)
Query: 103 ITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGP 162
I+ K G N+A + M + V + + R R A +RR P
Sbjct: 17 ISKLVKAGLINQAIYLFDQMTESNCRVFSVDYNRFIGVLLRHSRLHLAHHYYRR--HVIP 74
Query: 163 RPSAL---TYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGG 219
R +L TY + A + LLD + PD F+ + + +
Sbjct: 75 RGFSLLPFTYSRFISALCSAPNNINLPLIHSLLLDMDSLGFVPDIWAFNTYLNLLCRQNR 134
Query: 220 YEKARKLFALMAERGVQQSTVTYNSLMSFETNYK---EVSKIYDQMQRAGLQPDVVSYAL 276
E A +LF M +G V+Y ++ N K E +K++ ++ GL PD +
Sbjct: 135 LETALELFHSMPSKGRDPDVVSYTIIIDALCNAKRFDEAAKVWRRLIDKGLSPDYKACVA 194
Query: 277 LINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDR 336
L+ R + A + ++ GV+ YN L+D F G VD+A + M R
Sbjct: 195 LVVGLCSGGRVDLAYELVVGVIKGGVKVNSLVYNALIDGFCRMGRVDKAMKIKAFMSRTG 254
Query: 337 CSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKM- 395
C PD+ +Y +L+ ++ A + +++ G P++ +Y L+KG+ K N +++
Sbjct: 255 CVPDLVTYNILLNYCCEEGMVDEAVRLVETMERSGVEPDLYSYNELLKGFCKANMVDRAH 314
Query: 396 MEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILL 453
+ + ++M+ G+ + + T++ A+ K + ++EM G PD NIL+
Sbjct: 315 LMMVERMQTKGM-CDVVSYNTVITAFCKARRTRKGYELFEEMCGKGIRPDMVTFNILI 371
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 64/271 (23%), Positives = 104/271 (38%), Gaps = 7/271 (2%)
Query: 216 KAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSKIYDQMQRA----GLQPDV 271
KAG +A LF M E + +V YN + + + + +R G
Sbjct: 22 KAGLINQAIYLFDQMTESNCRVFSVDYNRFIGVLLRHSRLHLAHHYYRRHVIPRGFSLLP 81
Query: 272 VSYALLINAYGKARREEEALAVFEEMLDA---GVRPTHKAYNILLDAFAISGMVDQARTV 328
+Y+ I+A A + +LD G P A+N L+ ++ A +
Sbjct: 82 FTYSRFISALCSAPNNINLPLIHSLLLDMDSLGFVPDIWAFNTYLNLLCRQNRLETALEL 141
Query: 329 FKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAK 388
F M PD+ SYT ++ A NA + A K +RRL G P+ L+ G
Sbjct: 142 FHSMPSKGRDPDVVSYTIIIDALCNAKRFDEAAKVWRRLIDKGLSPDYKACVALVVGLCS 201
Query: 389 VNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKA 448
++ E+ + G+K N ++ ++D + + D A+ M G PD
Sbjct: 202 GGRVDLAYELVVGVIKGGVKVNSLVYNALIDGFCRMGRVDKAMKIKAFMSRTGCVPDLVT 261
Query: 449 KNILLSLAKTADERNEANELLGNFNHPNNEP 479
NILL+ +EA L+ EP
Sbjct: 262 YNILLNYCCEEGMVDEAVRLVETMERSGVEP 292
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 49/237 (20%), Positives = 94/237 (39%), Gaps = 43/237 (18%)
Query: 70 LKQLKKWNVV--SEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGY 127
LK K N+V + ++ R+Q+ + + + +ITA+ K K ++ M KG
Sbjct: 301 LKGFCKANMVDRAHLMMVERMQTKGMCDVVSYNTVITAFCKARRTRKGYELFEEMCGKGI 360
Query: 128 APSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEE 187
P +V+ L++A+ R G + + M P + Y ++ + K A
Sbjct: 361 RPDMVTFNILIDAFLREGSTHVVKKLLDEMTKMRVLPDCIFYTAVVDHLCKNGKVDVAHS 420
Query: 188 VFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMS 247
VF ++ E GV ++YN+L++
Sbjct: 421 VFRDMV--------------------------------------ENGVNPDVISYNALLN 442
Query: 248 FETNYKEV---SKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAG 301
V ++D+MQ GL PD V+Y L++ + ++ A V+++M++ G
Sbjct: 443 GFCKTSRVMDAMHLFDEMQSKGLYPDEVTYKLIVGGLIRGKKISLACRVWDQMMERG 499
>gi|357454999|ref|XP_003597780.1| Beta-D-galactosidase [Medicago truncatula]
gi|357455013|ref|XP_003597787.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355486828|gb|AES68031.1| Beta-D-galactosidase [Medicago truncatula]
gi|355486835|gb|AES68038.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 639
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 95/374 (25%), Positives = 187/374 (50%), Gaps = 12/374 (3%)
Query: 99 FLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQ 158
+ L+ Y K G +A ++ M + P+V ++T L+ G+ GR ++A +++ M
Sbjct: 269 YTTLMGIYFKLGKVEEALNLVHEMRMRRCVPTVYTYTELIRGLGKSGRVEDAYGVYKNML 328
Query: 159 SSGPRPSALTYQIILKLFVEANKFKEAEEVF--MTLLDEEKSPLKPDQKMFHMMI-YMYK 215
G +P + ++ + +++ KEA E+F M LL+ P+ ++ +I +++
Sbjct: 329 KDGCKPDVVLMNNLINILGRSDRLKEAVELFEEMRLLN-----CTPNVVTYNTIIKSLFE 383
Query: 216 KAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSK---IYDQMQRAGLQPDVV 272
+A M + GV S+ TY+ L+ V K + ++M G P
Sbjct: 384 DKAPPSEASSWLERMKKDGVVPSSFTYSILIDGFCKTNRVEKALLLLEEMDEKGFPPCPA 443
Query: 273 SYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCM 332
+Y LIN+ GKA+R E A +F+E+ + + + Y +++ F G ++A +F M
Sbjct: 444 AYCSLINSLGKAKRYEAANELFQELKENCGSSSVRVYAVMIKHFGKCGRFNEAMGLFNEM 503
Query: 333 RRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNL 392
++ C PD+ +Y +++ V A M+ A FR ++++G P++ ++ ++ G A+
Sbjct: 504 KKLGCIPDVYAYNALITGMVRADMMDEAFSLFRTMEENGCNPDINSHNIILNGLARTGGP 563
Query: 393 EKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKA-KNI 451
++ ME++ KM+ + IKP+ + T++ + F+ A KEM S GF D +I
Sbjct: 564 KRAMEMFAKMKSSTIKPDAVSYNTVLGCLSRAGLFEEATKLMKEMNSKGFEYDLITYSSI 623
Query: 452 LLSLAKTADERNEA 465
L ++ K ++RN A
Sbjct: 624 LEAVGKVDEDRNMA 637
Score = 134 bits (338), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 92/354 (25%), Positives = 172/354 (48%), Gaps = 14/354 (3%)
Query: 128 APSVVSHTALMEAYGRGGRYK---NAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKE 184
+P + + L E GR K A +IF +++ RP+A TY ++ + ++ ++
Sbjct: 154 SPCAIGPSELSEIVKILGRVKMVNKALSIFYQVKGRKCRPTAGTYNSVILMLMQEGHHEK 213
Query: 185 AEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNS 244
E++ + E PD + +I + K + A +LF M E G+Q + Y +
Sbjct: 214 VHELYNEMCSE--GHCFPDTVTYSALISAFGKLNRDDSAVRLFDEMKENGLQPTAKIYTT 271
Query: 245 LMSFETNYKEVSK---IYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAG 301
LM +V + + +M+ P V +Y LI GK+ R E+A V++ ML G
Sbjct: 272 LMGIYFKLGKVEEALNLVHEMRMRRCVPTVYTYTELIRGLGKSGRVEDAYGVYKNMLKDG 331
Query: 302 VRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTML-SAYVNASDMEGA 360
+P N L++ S + +A +F+ MR C+P++ +Y T++ S + + + A
Sbjct: 332 CKPDVVLMNNLINILGRSDRLKEAVELFEEMRLLNCTPNVVTYNTIIKSLFEDKAPPSEA 391
Query: 361 EKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDA 420
+ R+K+DG VP+ TY LI G+ K N +EK + + ++M G P + +++++
Sbjct: 392 SSWLERMKKDGVVPSSFTYSILIDGFCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINS 451
Query: 421 YGKNKDFDSAVVWYKEM-ESCGFPPDQKAKNILLSLAKTADERNEANELLGNFN 473
GK K +++A ++E+ E+CG + + + K + NE +G FN
Sbjct: 452 LGKAKRYEAANELFQELKENCG----SSSVRVYAVMIKHFGKCGRFNEAMGLFN 501
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 90/376 (23%), Positives = 176/376 (46%), Gaps = 7/376 (1%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
LI+A+GK + A ++ M + G P+ +T LM Y + G+ + A + M+
Sbjct: 237 LISAFGKLNRDDSAVRLFDEMKENGLQPTAKIYTTLMGIYFKLGKVEEALNLVHEMRMRR 296
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
P+ TY +++ ++ + ++A V+ +L K KPD + + +I + ++ +
Sbjct: 297 CVPTVYTYTELIRGLGKSGRVEDAYGVYKNML---KDGCKPDVVLMNNLINILGRSDRLK 353
Query: 222 KARKLFALMAERGVQQSTVTYNSLMS--FETNY--KEVSKIYDQMQRAGLQPDVVSYALL 277
+A +LF M + VTYN+++ FE E S ++M++ G+ P +Y++L
Sbjct: 354 EAVELFEEMRLLNCTPNVVTYNTIIKSLFEDKAPPSEASSWLERMKKDGVVPSSFTYSIL 413
Query: 278 INAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRC 337
I+ + K R E+AL + EEM + G P AY L+++ + + A +F+ ++ +
Sbjct: 414 IDGFCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINSLGKAKRYEAANELFQELKENCG 473
Query: 338 SPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMME 397
S + Y M+ + A F +K+ G +P+V Y LI G + + +++
Sbjct: 474 SSSVRVYAVMIKHFGKCGRFNEAMGLFNEMKKLGCIPDVYAYNALITGMVRADMMDEAFS 533
Query: 398 IYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAK 457
++ M NG P+ I++ + A+ + +M+S PD + N +L
Sbjct: 534 LFRTMEENGCNPDINSHNIILNGLARTGGPKRAMEMFAKMKSSTIKPDAVSYNTVLGCLS 593
Query: 458 TADERNEANELLGNFN 473
A EA +L+ N
Sbjct: 594 RAGLFEEATKLMKEMN 609
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 74/272 (27%), Positives = 143/272 (52%), Gaps = 5/272 (1%)
Query: 187 EVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLM 246
E++ T+ D KSP ++ + + KA +F + R + + TYNS++
Sbjct: 143 ELWRTIQDMVKSPCAIGPSELSEIVKILGRVKMVNKALSIFYQVKGRKCRPTAGTYNSVI 202
Query: 247 SF---ETNYKEVSKIYDQMQRAG-LQPDVVSYALLINAYGKARREEEALAVFEEMLDAGV 302
E ++++V ++Y++M G PD V+Y+ LI+A+GK R++ A+ +F+EM + G+
Sbjct: 203 LMLMQEGHHEKVHELYNEMCSEGHCFPDTVTYSALISAFGKLNRDDSAVRLFDEMKENGL 262
Query: 303 RPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEK 362
+PT K Y L+ + G V++A + MR RC P + +YT ++ + +E A
Sbjct: 263 QPTAKIYTTLMGIYFKLGKVEEALNLVHEMRMRRCVPTVYTYTELIRGLGKSGRVEDAYG 322
Query: 363 FFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYG 422
++ + +DG P+V+ LI + + L++ +E++++MR+ PN + TI+ +
Sbjct: 323 VYKNMLKDGCKPDVVLMNNLINILGRSDRLKEAVELFEEMRLLNCTPNVVTYNTIIKSLF 382
Query: 423 KNKDFDS-AVVWYKEMESCGFPPDQKAKNILL 453
++K S A W + M+ G P +IL+
Sbjct: 383 EDKAPPSEASSWLERMKKDGVVPSSFTYSILI 414
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 102/398 (25%), Positives = 168/398 (42%), Gaps = 51/398 (12%)
Query: 43 SAVAVLRSERTRG-QPLPK--DLVLGTLVRLKQLKK-WNVVSEVLEWLRIQSWWDFNEMD 98
SAV + + G QP K ++G +L ++++ N+V E+ + + + + E
Sbjct: 249 SAVRLFDEMKENGLQPTAKIYTTLMGIYFKLGKVEEALNLVHEMRMRRCVPTVYTYTE-- 306
Query: 99 FLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFR--- 155
LI GK G A V M K G P VV L+ GR R K A +F
Sbjct: 307 ---LIRGLGKSGRVEDAYGVYKNMLKDGCKPDVVLMNNLINILGRSDRLKEAVELFEEMR 363
Query: 156 ---------------------------------RMQSSGPRPSALTYQIILKLFVEANKF 182
RM+ G PS+ TY I++ F + N+
Sbjct: 364 LLNCTPNVVTYNTIIKSLFEDKAPPSEASSWLERMKKDGVVPSSFTYSILIDGFCKTNRV 423
Query: 183 KEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTY 242
++A + + +DE+ P P + +I KA YE A +LF + E S Y
Sbjct: 424 EKAL-LLLEEMDEKGFP--PCPAAYCSLINSLGKAKRYEAANELFQELKENCGSSSVRVY 480
Query: 243 NSLMSF---ETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLD 299
++ + E ++++M++ G PDV +Y LI +A +EA ++F M +
Sbjct: 481 AVMIKHFGKCGRFNEAMGLFNEMKKLGCIPDVYAYNALITGMVRADMMDEAFSLFRTMEE 540
Query: 300 AGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEG 359
G P ++NI+L+ A +G +A +F M+ PD SY T+L A E
Sbjct: 541 NGCNPDINSHNIILNGLARTGGPKRAMEMFAKMKSSTIKPDAVSYNTVLGCLSRAGLFEE 600
Query: 360 AEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMME 397
A K + + GF ++ITY ++++ KV+ M E
Sbjct: 601 ATKLMKEMNSKGFEYDLITYSSILEAVGKVDEDRNMAE 638
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 75/316 (23%), Positives = 139/316 (43%), Gaps = 19/316 (6%)
Query: 172 ILKLFVEANKFKEAEEVFMTLLDEE--KSPLKPDQKMFHMMIYMYKKAGGYEKARKLFAL 229
ILK+F ++A EV LD + LK D ++ H+ I +K AG
Sbjct: 69 ILKIFKWGPDAEKALEVLKLKLDIRLVREVLKIDVEV-HVKIQFFKWAG----------- 116
Query: 230 MAERGVQQSTVTYNSLMSFETNYKEVSKIYDQMQRAGLQPDVVSYALL---INAYGKARR 286
+R + + TY +L+ + V +++ +Q P + + L + G+ +
Sbjct: 117 -KKRNFEHDSTTYMALIRCLDENRLVGELWRTIQDMVKSPCAIGPSELSEIVKILGRVKM 175
Query: 287 EEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRD-RCSPDICSYT 345
+AL++F ++ RPT YN ++ G ++ ++ M + C PD +Y+
Sbjct: 176 VNKALSIFYQVKGRKCRPTAGTYNSVILMLMQEGHHEKVHELYNEMCSEGHCFPDTVTYS 235
Query: 346 TMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVN 405
++SA+ + + A + F +K++G P Y TL+ Y K+ +E+ + + +MR+
Sbjct: 236 ALISAFGKLNRDDSAVRLFDEMKENGLQPTAKIYTTLMGIYFKLGKVEEALNLVHEMRMR 295
Query: 406 GIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEA 465
P +T ++ GK+ + A YK M G PD N L+++ +D EA
Sbjct: 296 RCVPTVYTYTELIRGLGKSGRVEDAYGVYKNMLKDGCKPDVVLMNNLINILGRSDRLKEA 355
Query: 466 NELLGNFNHPNNEPGI 481
EL N P +
Sbjct: 356 VELFEEMRLLNCTPNV 371
>gi|410110111|gb|AFV61135.1| pentatricopeptide repeat-containing protein 123, partial [Lippia
duartei]
Length = 381
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 98/374 (26%), Positives = 182/374 (48%), Gaps = 37/374 (9%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
LI K D++KA + S + + G+ P +V++ A++ +G+ ++ A ++ M+++G
Sbjct: 10 LIELSRKLCDYSKAISIFSRLKRLGFXPDLVAYNAMINVFGKAKLFREARSLIGEMKTAG 69
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
P+ +Y +L ++VE KF EA VF + + E K L D ++MI +Y + G +
Sbjct: 70 VMPNTTSYSTLLTMYVENKKFLEALSVF-SEMREIKCLL--DLTTCNIMIDVYGQLGMAK 126
Query: 222 KARKLFALMAERGVQQSTVTYNSLMSFETN---YKEVSKIYDQMQRAGLQPDVVSYALLI 278
+A KLF M + G++ + V+YN+L+ + + E ++ MQR ++ +VV+Y ++
Sbjct: 127 EADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMM 186
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCS 338
YGK E+A + +EM G+ P Y+ ++ + G +D+A +F+ +R
Sbjct: 187 MIYGKTLEHEKANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAXLFQKLRSSGVE 246
Query: 339 PDICSYTTMLSAY-------------------------------VNASDMEGAEKFFRRL 367
D + TM+ AY A +E A FR+
Sbjct: 247 IDQILFQTMIVAYERAGLVAHAKRLLHELKRPDNIPRDTAIHILAGAGRIEEATYVFRQX 306
Query: 368 KQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDF 427
G V ++ + +I +K ++E++DKMR G P+ + +++AYGK ++F
Sbjct: 307 IDAGEVKDITVFERMIHLLSKYKKYSNVVEVFDKMRGLGYFPDSDVIAIVLNAYGKLQEF 366
Query: 428 DSAVVWYKEMESCG 441
D A Y EM+ G
Sbjct: 367 DKANDVYMEMQEVG 380
Score = 126 bits (316), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 76/280 (27%), Positives = 135/280 (48%), Gaps = 3/280 (1%)
Query: 203 DQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSF---ETNYKEVSKIY 259
D ++ +I + +K Y KA +F+ + G V YN++++ ++E +
Sbjct: 3 DLVLYSNLIELSRKLCDYSKAISIFSRLKRLGFXPDLVAYNAMINVFGKAKLFREARSLI 62
Query: 260 DQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAIS 319
+M+ AG+ P+ SY+ L+ Y + ++ EAL+VF EM + NI++D +
Sbjct: 63 GEMKTAGVMPNTTSYSTLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQL 122
Query: 320 GMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITY 379
GM +A +F MR+ P++ SY T+L Y +A A FR +++ NV+TY
Sbjct: 123 GMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTY 182
Query: 380 GTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMES 439
+++ Y K EK + +M+ GI+PN ++TI+ +GK D A ++++ S
Sbjct: 183 NSMMMIYGKTLEHEKANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAXLFQKLRS 242
Query: 440 CGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEP 479
G DQ ++ + A A LL P+N P
Sbjct: 243 SGVEIDQILFQTMIVAYERAGLVAHAKRLLHELKRPDNIP 282
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 59/244 (24%), Positives = 115/244 (47%), Gaps = 6/244 (2%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + + L+ YG F +A + M +K +VV++ ++M YG+ ++ A +
Sbjct: 143 NVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLI 202
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
+ MQS G P+++TY I+ ++ + K A +F L S ++ DQ +F MI Y
Sbjct: 203 QEMQSRGIEPNSITYSTIISIWGKVGKLDRAAXLFQKL---RSSGVEIDQILFQTMIVAY 259
Query: 215 KKAGGYEKARKLFA-LMAERGVQQSTVTYNSLMSFETNYKEVSKIYDQMQRAGLQPDVVS 273
++AG A++L L + + T + +++ +E + ++ Q AG D+
Sbjct: 260 ERAGLVAHAKRLLHELKRPDNIPRDTAIH--ILAGAGRIEEATYVFRQXIDAGEVKDITV 317
Query: 274 YALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMR 333
+ +I+ K ++ + VF++M G P I+L+A+ D+A V+ M+
Sbjct: 318 FERMIHLLSKYKKYSNVVEVFDKMRGLGYFPDSDVIAIVLNAYGKLQEFDKANDVYMEMQ 377
Query: 334 RDRC 337
C
Sbjct: 378 EVGC 381
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/142 (24%), Positives = 63/142 (44%)
Query: 340 DICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIY 399
D+ Y+ ++ D A F RLK+ GF P+++ Y +I + K + +
Sbjct: 3 DLVLYSNLIELSRKLCDYSKAISIFSRLKRLGFXPDLVAYNAMINVFGKAKLFREARSLI 62
Query: 400 DKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTA 459
+M+ G+ PN T ++T++ Y +NK F A+ + EM D NI++ +
Sbjct: 63 GEMKTAGVMPNTTSYSTLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQL 122
Query: 460 DERNEANELLGNFNHPNNEPGI 481
EA++L EP +
Sbjct: 123 GMAKEADKLFWGMRKMGIEPNV 144
>gi|357481045|ref|XP_003610808.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355512143|gb|AES93766.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1084
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 93/378 (24%), Positives = 179/378 (47%), Gaps = 32/378 (8%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + + +L++ ++G + +++LS M +G P+ +L+ AY + Y A +F
Sbjct: 313 NVVTYRILLSGCLRKGQLGRCKRILSMMITEGCYPNREIFNSLIHAYCKSRDYSYAYKLF 372
Query: 155 RRMQSSGPRPSALTYQIILKLFV------EANKFKEAEEVFMTLLDEEKSPLKPDQKMFH 208
++M G +P L Y I + ++ E+ + +LD K + F
Sbjct: 373 KKMIKCGCQPGYLVYNIFIGSVCSNEEQPSSDILDLVEKAYSEMLDLGVVLNKVNVSNFA 432
Query: 209 MMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSK---IYDQMQRA 265
+ AG +++A K+ M +G TY+ ++ F + +V K ++++M+R
Sbjct: 433 RCLC---GAGKFDQAFKIICEMMGKGFVPDDSTYSKVIGFLCDASKVEKAFSLFEEMKRN 489
Query: 266 GLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQA 325
G+ P V +Y +LI+++ KA ++A F+EML G P Y L+ A+ + + A
Sbjct: 490 GIVPSVYTYTILIDSFCKAGLIQQARKWFDEMLHKGCTPNVVTYTALIHAYLKAKQMPVA 549
Query: 326 RTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQD--------------- 370
+F+ M + C P++ +YT ++ + A +E A + + R++ D
Sbjct: 550 DELFEMMLLEGCKPNVVTYTALIDGHCKAGQIEKACQIYARMRGDIESSDMDKYFKLDHN 609
Query: 371 ---GFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDF 427
G PNVITYG L+ G K N +++ E+ D M +G +PNQ ++ ++D + K
Sbjct: 610 NCEG--PNVITYGALVDGLCKANRVKEAHELLDTMLAHGCEPNQIVYDAVIDGFCKIGKL 667
Query: 428 DSAVVWYKEMESCGFPPD 445
A + +M G+ P+
Sbjct: 668 QDAQEVFTKMSERGYSPN 685
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 86/321 (26%), Positives = 146/321 (45%), Gaps = 47/321 (14%)
Query: 127 YAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAE 186
+ P V + ++ ++ A I RM+SS P+ +TY+I+L + + +
Sbjct: 275 FVPDTVFYNRMVSGLCEASLFEEAMDILHRMRSSSCIPNVVTYRILLSGCLRKGQLGRCK 334
Query: 187 EVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLM 246
+ ++ E P++++F+ +I+ Y K+ Y A KLF M + G Q + YN +
Sbjct: 335 RILSMMITE---GCYPNREIFNSLIHAYCKSRDYSYAYKLFKKMIKCGCQPGYLVYNIFI 391
Query: 247 S----------------FETNYKEVS----------------------------KIYDQM 262
E Y E+ KI +M
Sbjct: 392 GSVCSNEEQPSSDILDLVEKAYSEMLDLGVVLNKVNVSNFARCLCGAGKFDQAFKIICEM 451
Query: 263 QRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMV 322
G PD +Y+ +I A + E+A ++FEEM G+ P+ Y IL+D+F +G++
Sbjct: 452 MGKGFVPDDSTYSKVIGFLCDASKVEKAFSLFEEMKRNGIVPSVYTYTILIDSFCKAGLI 511
Query: 323 DQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTL 382
QAR F M C+P++ +YT ++ AY+ A M A++ F + +G PNV+TY L
Sbjct: 512 QQARKWFDEMLHKGCTPNVVTYTALIHAYLKAKQMPVADELFEMMLLEGCKPNVVTYTAL 571
Query: 383 IKGYAKVNNLEKMMEIYDKMR 403
I G+ K +EK +IY +MR
Sbjct: 572 IDGHCKAGQIEKACQIYARMR 592
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 90/380 (23%), Positives = 181/380 (47%), Gaps = 24/380 (6%)
Query: 110 GDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTY 169
G F++A K++ M KG+ P +++ ++ + + A ++F M+ +G PS TY
Sbjct: 439 GKFDQAFKIICEMMGKGFVPDDSTYSKVIGFLCDASKVEKAFSLFEEMKRNGIVPSVYTY 498
Query: 170 QIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFAL 229
I++ F +A ++A + F +L + +P + + +I+ Y KA A +LF +
Sbjct: 499 TILIDSFCKAGLIQQARKWFDEMLHKGCTP---NVVTYTALIHAYLKAKQMPVADELFEM 555
Query: 230 MAERGVQQSTVTYNSLMSFETNYKEVSK---IYDQMQRAGLQ-----------------P 269
M G + + VTY +L+ ++ K IY +M R ++ P
Sbjct: 556 MLLEGCKPNVVTYTALIDGHCKAGQIEKACQIYARM-RGDIESSDMDKYFKLDHNNCEGP 614
Query: 270 DVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVF 329
+V++Y L++ KA R +EA + + ML G P Y+ ++D F G + A+ VF
Sbjct: 615 NVITYGALVDGLCKANRVKEAHELLDTMLAHGCEPNQIVYDAVIDGFCKIGKLQDAQEVF 674
Query: 330 KCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKV 389
M SP++ +Y++ + + ++ K ++ ++ PNV+ Y ++ G K+
Sbjct: 675 TKMSERGYSPNLYTYSSFIDCLFKDNRLDLVLKVLSKMLENSCTPNVVIYTEMVDGLCKI 734
Query: 390 NNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAK 449
++ ++ KM G PN +T ++D +GK+ + + +++M S G P+
Sbjct: 735 GKTDEAYKLMLKMEEKGCNPNVVTYTAMIDGFGKSGKIEQCLELFRDMCSKGCAPNFITY 794
Query: 450 NILLSLAKTADERNEANELL 469
+L++ + +EA +LL
Sbjct: 795 RVLINHCCSNGLLDEAYKLL 814
Score = 125 bits (313), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 86/364 (23%), Positives = 179/364 (49%), Gaps = 24/364 (6%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + + LI AY K A+++ M +G P+VV++TAL++ + + G+ + A I+
Sbjct: 529 NVVTYTALIHAYLKAKQMPVADELFEMMLLEGCKPNVVTYTALIDGHCKAGQIEKACQIY 588
Query: 155 RRM----------------QSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKS 198
RM ++ P+ +TY ++ +AN+ KEA E+ T+L
Sbjct: 589 ARMRGDIESSDMDKYFKLDHNNCEGPNVITYGALVDGLCKANRVKEAHELLDTMLAH--- 645
Query: 199 PLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMS--FETNYKE-V 255
+P+Q ++ +I + K G + A+++F M+ERG + TY+S + F+ N + V
Sbjct: 646 GCEPNQIVYDAVIDGFCKIGKLQDAQEVFTKMSERGYSPNLYTYSSFIDCLFKDNRLDLV 705
Query: 256 SKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDA 315
K+ +M P+VV Y +++ K + +EA + +M + G P Y ++D
Sbjct: 706 LKVLSKMLENSCTPNVVIYTEMVDGLCKIGKTDEAYKLMLKMEEKGCNPNVVTYTAMIDG 765
Query: 316 FAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPN 375
F SG ++Q +F+ M C+P+ +Y +++ + ++ A K +KQ + +
Sbjct: 766 FGKSGKIEQCLELFRDMCSKGCAPNFITYRVLINHCCSNGLLDEAYKLLDEMKQTYWPKH 825
Query: 376 VITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYK 435
++++ +I+G+++ + + D++ N P +++ ++D Y K + A+ +
Sbjct: 826 ILSHRKIIEGFSQ--EFITSIGLLDELSENESVPVDSLYRILIDNYIKAGRLEVALDLLE 883
Query: 436 EMES 439
E+ S
Sbjct: 884 EISS 887
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 83/349 (23%), Positives = 154/349 (44%), Gaps = 27/349 (7%)
Query: 99 FLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQ 158
+ +LI ++ K G +A K M KG P+VV++TAL+ AY + + A+ +F M
Sbjct: 498 YTILIDSFCKAGLIQQARKWFDEMLHKGCTPNVVTYTALIHAYLKAKQMPVADELFEMML 557
Query: 159 SSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLL-DEEKSPLKPDQKMFHMMIYMYKKA 217
G +P+ +TY ++ +A + ++A +++ + D E S +
Sbjct: 558 LEGCKPNVVTYTALIDGHCKAGQIEKACQIYARMRGDIESSDMD---------------- 601
Query: 218 GGYEKARKLFALMAERGVQQSTVTYNSL---MSFETNYKEVSKIYDQMQRAGLQPDVVSY 274
K F L + +TY +L + KE ++ D M G +P+ + Y
Sbjct: 602 -------KYFKLDHNNCEGPNVITYGALVDGLCKANRVKEAHELLDTMLAHGCEPNQIVY 654
Query: 275 ALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRR 334
+I+ + K + ++A VF +M + G P Y+ +D +D V M
Sbjct: 655 DAVIDGFCKIGKLQDAQEVFTKMSERGYSPNLYTYSSFIDCLFKDNRLDLVLKVLSKMLE 714
Query: 335 DRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEK 394
+ C+P++ YT M+ + A K ++++ G PNV+TY +I G+ K +E+
Sbjct: 715 NSCTPNVVIYTEMVDGLCKIGKTDEAYKLMLKMEEKGCNPNVVTYTAMIDGFGKSGKIEQ 774
Query: 395 MMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFP 443
+E++ M G PN + +++ N D A EM+ +P
Sbjct: 775 CLELFRDMCSKGCAPNFITYRVLINHCCSNGLLDEAYKLLDEMKQTYWP 823
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 74/309 (23%), Positives = 132/309 (42%), Gaps = 32/309 (10%)
Query: 170 QIILKLFVEANK---FKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKL 226
++ +K F+ A + + +VF LLD + D ++ + M K +E R+L
Sbjct: 120 ELCVKFFLWAGRQIGYSHTPQVFDKLLDLLGCNVNADDRV-PLKFLMEIKDDDHELLRRL 178
Query: 227 FALMAERGVQQSTVTYNSLMSFETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARR 286
+ + + +N M+ E E+ ++ D G +P +Y LI + +A +
Sbjct: 179 LNFLVRKCCRNGW--WN--MALE----ELGRLKD----FGYKPSQTTYNALIQVFLRADK 226
Query: 287 EEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMV------DQARTVFKCM-RRDRCSP 339
+ A V EML +Y ++D + +S + R F + + P
Sbjct: 227 LDTAYLVKREML---------SYAFVMDRYTLSCFAYSLCKGGKCREAFDLIDEAEDFVP 277
Query: 340 DICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIY 399
D Y M+S AS E A R++ +PNV+TY L+ G + L + I
Sbjct: 278 DTVFYNRMVSGLCEASLFEEAMDILHRMRSSSCIPNVVTYRILLSGCLRKGQLGRCKRIL 337
Query: 400 DKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTA 459
M G PN+ IF +++ AY K++D+ A +K+M CG P NI + +
Sbjct: 338 SMMITEGCYPNREIFNSLIHAYCKSRDYSYAYKLFKKMIKCGCQPGYLVYNIFIGSVCSN 397
Query: 460 DERNEANEL 468
+E+ ++ L
Sbjct: 398 EEQPSSDIL 406
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 72/354 (20%), Positives = 160/354 (45%), Gaps = 20/354 (5%)
Query: 59 PKDLVLGTLVRLKQLKKWNVVSEVLEWL--RIQSWWDFNEMDFLMLITAYGKQGDFNKAE 116
P + G LV L K N V E E L + + N++ + +I + K G A+
Sbjct: 614 PNVITYGALV--DGLCKANRVKEAHELLDTMLAHGCEPNQIVYDAVIDGFCKIGKLQDAQ 671
Query: 117 KVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLF 176
+V + M+++GY+P++ ++++ ++ + R + +M + P+ + Y ++
Sbjct: 672 EVFTKMSERGYSPNLYTYSSFIDCLFKDNRLDLVLKVLSKMLENSCTPNVVIYTEMVDGL 731
Query: 177 VEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQ 236
+ K +E + +L E+ P+ + MI + K+G E+ +LF M +G
Sbjct: 732 CKIGK---TDEAYKLMLKMEEKGCNPNVVTYTAMIDGFGKSGKIEQCLELFRDMCSKGCA 788
Query: 237 QSTVTYNSLMSFETN---YKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAV 293
+ +TY L++ + E K+ D+M++ ++S+ +I G ++ ++ +
Sbjct: 789 PNFITYRVLINHCCSNGLLDEAYKLLDEMKQTYWPKHILSHRKIIE--GFSQEFITSIGL 846
Query: 294 FEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICS-----YTTML 348
+E+ + P Y IL+D + +G ++ A + + SP Y +++
Sbjct: 847 LDELSENESVPVDSLYRILIDNYIKAGRLEVALDL---LEEISSSPSHAVSNKYLYASLI 903
Query: 349 SAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKM 402
+AS ++ A + + + VP + LIKG KV+ ++ +++ D +
Sbjct: 904 ENLSHASKVDKALELYASMISKNVVPELSILVHLIKGLIKVDKWQEALQLSDSI 957
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 77/362 (21%), Positives = 131/362 (36%), Gaps = 49/362 (13%)
Query: 137 LMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEE 196
L+ R G + A R++ G +PS TY ++++F+ A+K A V +L
Sbjct: 182 LVRKCCRNGWWNMALEELGRLKDFGYKPSQTTYNALIQVFLRADKLDTAYLVKREMLS-- 239
Query: 197 KSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVS 256
D+ Y K G K R+ F L+ E
Sbjct: 240 -YAFVMDRYTLSCFAYSLCKGG---KCREAFDLIDEA----------------------- 272
Query: 257 KIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAF 316
PD V Y +++ +A EEA+ + M + P Y ILL
Sbjct: 273 --------EDFVPDTVFYNRMVSGLCEASLFEEAMDILHRMRSSSCIPNVVTYRILLSGC 324
Query: 317 AISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNV 376
G + + + + M + C P+ + +++ AY + D A K F+++ + G P
Sbjct: 325 LRKGQLGRCKRILSMMITEGCYPNREIFNSLIHAYCKSRDYSYAYKLFKKMIKCGCQPGY 384
Query: 377 ITYGTLIKGYAK------VNNLEKMMEIYDKMRVNGI---KPNQTIFTTIMDAYGKNKDF 427
+ Y I + L+ + + Y +M G+ K N + F + GK F
Sbjct: 385 LVYNIFIGSVCSNEEQPSSDILDLVEKAYSEMLDLGVVLNKVNVSNFARCLCGAGK---F 441
Query: 428 DSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGINGLSIS 487
D A EM GF PD + ++ A + +A L P + +I
Sbjct: 442 DQAFKIICEMMGKGFVPDDSTYSKVIGFLCDASKVEKAFSLFEEMKRNGIVPSVYTYTIL 501
Query: 488 VD 489
+D
Sbjct: 502 ID 503
>gi|302799689|ref|XP_002981603.1| hypothetical protein SELMODRAFT_114722 [Selaginella moellendorffii]
gi|300150769|gb|EFJ17418.1| hypothetical protein SELMODRAFT_114722 [Selaginella moellendorffii]
Length = 609
Score = 147 bits (371), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 98/408 (24%), Positives = 189/408 (46%), Gaps = 22/408 (5%)
Query: 86 LRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGG 145
+R W + + + LI + K G+ KA K+L M + P+VV++++L+ + G
Sbjct: 179 MREDGAWKPDVVTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAG 238
Query: 146 RYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKP-DQ 204
A +FRRM S G P+ +TY ++ A+K A L+DE + P D
Sbjct: 239 DLDQALDLFRRMTSKGCVPNVVTYTTLIHGLCAAHKVDAAR----LLMDEMTATCCPADT 294
Query: 205 KMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETN---YKEVSKIYDQ 261
++ ++ Y + G E+A++LF MA + +TY L+ N +E + +
Sbjct: 295 VSYNALLDGYCRLGRIEEAKQLFKEMAAKSCLPDRITYTCLVRGFCNASRLEEARFLLEN 354
Query: 262 MQR-AGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISG 320
M+ AG+ PDVV+Y++++ Y +A+R EA +EM+ V P Y+ L+D +G
Sbjct: 355 MKTAAGIDPDVVTYSIVVAGYSRAKRFVEAAEFIQEMIARNVAPNAVTYSSLIDGLCKAG 414
Query: 321 MVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYG 380
V+ A V K + + PD+ +YT ++ E A + P+V T+
Sbjct: 415 RVNHAMEVLKNVDK----PDVVTYTIVIEGLCGTDRTEEALTLLEEMVNKRVEPSVGTFN 470
Query: 381 TLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEM--- 437
++I ++ ++++ ++ M +G++P +TT+++ + + + A ++ M
Sbjct: 471 SVIGALCRLGDMDEAWKLLVAMAAHGLEPGMVTYTTLLEGFSRTGRMEIAYELFEVMRRK 530
Query: 438 -----ESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPG 480
+ P+Q ++ L K A E ++A ++ EP
Sbjct: 531 AKKSSSAANLVPEQAFSALIRGLCK-AREIDKAMAVVEELRSRECEPA 577
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 101/404 (25%), Positives = 185/404 (45%), Gaps = 11/404 (2%)
Query: 81 EVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFM-NKKGYAPSVVSHTALME 139
EVL+ +R + + + +I + KQG+ ++A ++L M + G AP VV++T++++
Sbjct: 30 EVLKEMRDGKSVAPDLVTYSTVINGFCKQGEMDRACEILREMVTRDGMAPDVVTYTSVVD 89
Query: 140 AYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSP 199
R G+ A + R M+ G P T+ ++ + A K EA +++ +L S
Sbjct: 90 GLCRDGKMDRACEMVREMKLKGVEPDKFTFSALITGWCNARKVDEALKLYKEIL---TSS 146
Query: 200 LKPDQKMFHMMIYMYKKAGGYEKARKLFALMAER---GVQQSTVTYNSLM---SFETNYK 253
+ D +I + +A +LF M R + VTY +L+ N +
Sbjct: 147 CRLDAVSSSALITGLCRERRIGEAYELFQEMEMREDGAWKPDVVTYTALIDGFCKSGNLE 206
Query: 254 EVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILL 313
+ K+ M+ P+VV+Y+ L++ KA ++AL +F M G P Y L+
Sbjct: 207 KAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLDQALDLFRRMTSKGCVPNVVTYTTLI 266
Query: 314 DAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFV 373
+ VD AR + M C D SY +L Y +E A++ F+ + +
Sbjct: 267 HGLCAAHKVDAARLLMDEMTATCCPADTVSYNALLDGYCRLGRIEEAKQLFKEMAAKSCL 326
Query: 374 PNVITYGTLIKGYAKVNNLEKMMEIYDKMRV-NGIKPNQTIFTTIMDAYGKNKDFDSAVV 432
P+ ITY L++G+ + LE+ + + M+ GI P+ ++ ++ Y + K F A
Sbjct: 327 PDRITYTCLVRGFCNASRLEEARFLLENMKTAAGIDPDVVTYSIVVAGYSRAKRFVEAAE 386
Query: 433 WYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPN 476
+ +EM + P+ + L+ A N A E+L N + P+
Sbjct: 387 FIQEMIARNVAPNAVTYSSLIDGLCKAGRVNHAMEVLKNVDKPD 430
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 83/332 (25%), Positives = 153/332 (46%), Gaps = 9/332 (2%)
Query: 164 PSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKA 223
P +TY ++ F + + A E+ ++ + + PD + ++ + G ++A
Sbjct: 43 PDLVTYSTVINGFCKQGEMDRACEILREMVT--RDGMAPDVVTYTSVVDGLCRDGKMDRA 100
Query: 224 RKLFALMAERGVQQSTVTYNSLMSFETNYKEVS---KIYDQMQRAGLQPDVVSYALLINA 280
++ M +GV+ T+++L++ N ++V K+Y ++ + + D VS + LI
Sbjct: 101 CEMVREMKLKGVEPDKFTFSALITGWCNARKVDEALKLYKEILTSSCRLDAVSSSALITG 160
Query: 281 YGKARREEEALAVFEEML---DAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRC 337
+ RR EA +F+EM D +P Y L+D F SG +++A + M +C
Sbjct: 161 LCRERRIGEAYELFQEMEMREDGAWKPDVVTYTALIDGFCKSGNLEKAMKMLGVMEGRKC 220
Query: 338 SPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMME 397
P++ +Y+++L A D++ A FRR+ G VPNV+TY TLI G + ++
Sbjct: 221 VPNVVTYSSLLHGLCKAGDLDQALDLFRRMTSKGCVPNVVTYTTLIHGLCAAHKVDAARL 280
Query: 398 IYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAK 457
+ D+M + + ++D Y + + A +KEM + PD+ L+
Sbjct: 281 LMDEMTATCCPADTVSYNALLDGYCRLGRIEEAKQLFKEMAAKSCLPDRITYTCLVRGFC 340
Query: 458 TADERNEANELLGNFNHPNN-EPGINGLSISV 488
A EA LL N +P + SI V
Sbjct: 341 NASRLEEARFLLENMKTAAGIDPDVVTYSIVV 372
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 90/369 (24%), Positives = 165/369 (44%), Gaps = 49/369 (13%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHT------------------- 135
N + + L+ K GD ++A + M KG P+VV++T
Sbjct: 223 NVVTYSSLLHGLCKAGDLDQALDLFRRMTSKGCVPNVVTYTTLIHGLCAAHKVDAARLLM 282
Query: 136 ----------------ALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEA 179
AL++ Y R GR + A+ +F+ M + P +TY +++ F A
Sbjct: 283 DEMTATCCPADTVSYNALLDGYCRLGRIEEAKQLFKEMAAKSCLPDRITYTCLVRGFCNA 342
Query: 180 NKFKEAEEVFMTLLDEEKSP--LKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQ 237
++ +EA LL+ K+ + PD + +++ Y +A + +A + M R V
Sbjct: 343 SRLEEAR----FLLENMKTAAGIDPDVVTYSIVVAGYSRAKRFVEAAEFIQEMIARNVAP 398
Query: 238 STVTYNSLMSFETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEM 297
+ VTY+SL+ V+ + ++ +PDVV+Y ++I R EEAL + EEM
Sbjct: 399 NAVTYSSLIDGLCKAGRVNHAMEVLKNVD-KPDVVTYTIVIEGLCGTDRTEEALTLLEEM 457
Query: 298 LDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDM 357
++ V P+ +N ++ A G +D+A + M P + +YTT+L + M
Sbjct: 458 VNKRVEPSVGTFNSVIGALCRLGDMDEAWKLLVAMAAHGLEPGMVTYTTLLEGFSRTGRM 517
Query: 358 EGAEKFF----RRLKQDGFVPNVI---TYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPN 410
E A + F R+ K+ N++ + LI+G K ++K M + +++R +P
Sbjct: 518 EIAYELFEVMRRKAKKSSSAANLVPEQAFSALIRGLCKAREIDKAMAVVEELRSRECEPA 577
Query: 411 QTIFTTIMD 419
+ I+D
Sbjct: 578 EEDCLAIVD 586
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/256 (23%), Positives = 129/256 (50%), Gaps = 21/256 (8%)
Query: 82 VLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAY 141
+LE ++ + D + + + +++ Y + F +A + + M + AP+ V++++L++
Sbjct: 351 LLENMKTAAGIDPDVVTYSIVVAGYSRAKRFVEAAEFIQEMIARNVAPNAVTYSSLIDGL 410
Query: 142 GRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSP-L 200
+ GR +A + + + +P +TY I+++ ++ +EA +TLL+E + +
Sbjct: 411 CKAGRVNHAMEVLKNVD----KPDVVTYTIVIEGLCGTDRTEEA----LTLLEEMVNKRV 462
Query: 201 KPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMS--FETNYKEVS-K 257
+P F+ +I + G ++A KL MA G++ VTY +L+ T E++ +
Sbjct: 463 EPSVGTFNSVIGALCRLGDMDEAWKLLVAMAAHGLEPGMVTYTTLLEGFSRTGRMEIAYE 522
Query: 258 IYDQMQR--------AGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAY 309
+++ M+R A L P+ +++ LI KAR ++A+AV EE+ P +
Sbjct: 523 LFEVMRRKAKKSSSAANLVPE-QAFSALIRGLCKAREIDKAMAVVEELRSRECEPAEEDC 581
Query: 310 NILLDAFAISGMVDQA 325
++D +G ++A
Sbjct: 582 LAIVDGLLRAGRTEEA 597
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/289 (21%), Positives = 119/289 (41%), Gaps = 18/289 (6%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFM-NKKGYAPSVVSHTALMEAYGRGGRYKNAEAI 153
+ + + L+ + +A +L M G P VV+++ ++ Y R R+ A
Sbjct: 328 DRITYTCLVRGFCNASRLEEARFLLENMKTAAGIDPDVVTYSIVVAGYSRAKRFVEAAEF 387
Query: 154 FRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYM 213
+ M + P+A+TY ++ +A + A EV K+ KPD + ++I
Sbjct: 388 IQEMIARNVAPNAVTYSSLIDGLCKAGRVNHAMEVL-------KNVDKPDVVTYTIVIEG 440
Query: 214 YKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFET---NYKEVSKIYDQMQRAGLQPD 270
E+A L M + V+ S T+NS++ + E K+ M GL+P
Sbjct: 441 LCGTDRTEEALTLLEEMVNKRVEPSVGTFNSVIGALCRLGDMDEAWKLLVAMAAHGLEPG 500
Query: 271 VVSYALLINAYGKARREEEALAVFEEMLDAGVRPT-------HKAYNILLDAFAISGMVD 323
+V+Y L+ + + R E A +FE M + + +A++ L+ + +D
Sbjct: 501 MVTYTTLLEGFSRTGRMEIAYELFEVMRRKAKKSSSAANLVPEQAFSALIRGLCKAREID 560
Query: 324 QARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGF 372
+A V + +R C P ++ + A E A K + + G
Sbjct: 561 KAMAVVEELRSRECEPAEEDCLAIVDGLLRAGRTEEAGKLINSISKVGL 609
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 41/177 (23%), Positives = 87/177 (49%), Gaps = 2/177 (1%)
Query: 264 RAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDA-GVRPTHKAYNILLDAFAISGMV 322
R + P+ +Y +++N KAR +A V +EM D V P Y+ +++ F G +
Sbjct: 2 REFVAPNERTYNVVVNGLCKARLTSKAYEVLKEMRDGKSVAPDLVTYSTVINGFCKQGEM 61
Query: 323 DQARTVFKCM-RRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGT 381
D+A + + M RD +PD+ +YT+++ M+ A + R +K G P+ T+
Sbjct: 62 DRACEILREMVTRDGMAPDVVTYTSVVDGLCRDGKMDRACEMVREMKLKGVEPDKFTFSA 121
Query: 382 LIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEME 438
LI G+ +++ +++Y ++ + + + + ++ + + A ++EME
Sbjct: 122 LITGWCNARKVDEALKLYKEILTSSCRLDAVSSSALITGLCRERRIGEAYELFQEME 178
>gi|410110085|gb|AFV61122.1| pentatricopeptide repeat-containing protein 123, partial [Lantana
fucata]
Length = 382
Score = 147 bits (371), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 98/374 (26%), Positives = 182/374 (48%), Gaps = 37/374 (9%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
LI K D++KA + S + + G+ P +V++ A++ +G+ ++ A ++ M+++G
Sbjct: 11 LIELSRKLCDYSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLIGEMKAAG 70
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
P+ +Y +L ++VE KF EA VF + + E K L D ++MI +Y + G +
Sbjct: 71 VMPNTTSYSTLLTMYVENKKFLEALSVF-SEMREIKCLL--DLTTCNIMIDVYGQLGMAK 127
Query: 222 KARKLFALMAERGVQQSTVTYNSLMSFETN---YKEVSKIYDQMQRAGLQPDVVSYALLI 278
+A KLF M + G++ + V+YN+L+ + + E ++ MQR ++ +VV+Y ++
Sbjct: 128 EADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMM 187
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCS 338
YGK E+A + +EM G+ P Y+ ++ + G +D+A +F+ +R
Sbjct: 188 MIYGKTLEHEKANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGIE 247
Query: 339 PDICSYTTMLSAY-------------------------------VNASDMEGAEKFFRRL 367
D + TM+ AY A +E A FR+
Sbjct: 248 IDQILFQTMIVAYERAGLVAHAKRLLHELKRPDNIPRDTAIHILAGAGRIEEATYVFRQA 307
Query: 368 KQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDF 427
G V ++ + +I +K ++E++DKMR G P+ + +++AYGK ++F
Sbjct: 308 IDAGEVKDITVFERMIHLLSKYKKYSNVVEVFDKMRGLGYFPDSDVIAIVLNAYGKLQEF 367
Query: 428 DSAVVWYKEMESCG 441
D A Y EM+ G
Sbjct: 368 DKANDVYMEMQEVG 381
Score = 115 bits (289), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 76/278 (27%), Positives = 129/278 (46%), Gaps = 38/278 (13%)
Query: 240 VTYNSLMSFE---TNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEE 296
V Y++L+ +Y + I+ +++R+G PD+V+Y +IN +GKA+ EA ++ E
Sbjct: 6 VLYSNLIELSRKLCDYSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLIGE 65
Query: 297 MLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASD 356
M AGV P +Y+ LL + + +A +VF MR +C D+ + M+ Y
Sbjct: 66 MKAAGVMPNTTSYSTLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGM 125
Query: 357 MEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKV---------------NNLEK------- 394
+ A+K F +++ G PNV++Y TL++ Y N+E+
Sbjct: 126 AKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNS 185
Query: 395 MMEIYDK-------------MRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCG 441
MM IY K M+ GI+PN ++TI+ +GK D A + ++++ S G
Sbjct: 186 MMMIYGKTLEHEKANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSG 245
Query: 442 FPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEP 479
DQ ++ + A A LL P+N P
Sbjct: 246 IEIDQILFQTMIVAYERAGLVAHAKRLLHELKRPDNIP 283
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 59/244 (24%), Positives = 115/244 (47%), Gaps = 6/244 (2%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + + L+ YG F +A + M +K +VV++ ++M YG+ ++ A +
Sbjct: 144 NVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLI 203
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
+ MQS G P+++TY I+ ++ + K A +F L S ++ DQ +F MI Y
Sbjct: 204 QEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKL---RSSGIEIDQILFQTMIVAY 260
Query: 215 KKAGGYEKARKLFA-LMAERGVQQSTVTYNSLMSFETNYKEVSKIYDQMQRAGLQPDVVS 273
++AG A++L L + + T + +++ +E + ++ Q AG D+
Sbjct: 261 ERAGLVAHAKRLLHELKRPDNIPRDTAIH--ILAGAGRIEEATYVFRQAIDAGEVKDITV 318
Query: 274 YALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMR 333
+ +I+ K ++ + VF++M G P I+L+A+ D+A V+ M+
Sbjct: 319 FERMIHLLSKYKKYSNVVEVFDKMRGLGYFPDSDVIAIVLNAYGKLQEFDKANDVYMEMQ 378
Query: 334 RDRC 337
C
Sbjct: 379 EVGC 382
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/142 (24%), Positives = 63/142 (44%)
Query: 340 DICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIY 399
D+ Y+ ++ D A F RLK+ GF P+++ Y +I + K + +
Sbjct: 4 DLVLYSNLIELSRKLCDYSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLI 63
Query: 400 DKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTA 459
+M+ G+ PN T ++T++ Y +NK F A+ + EM D NI++ +
Sbjct: 64 GEMKAAGVMPNTTSYSTLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQL 123
Query: 460 DERNEANELLGNFNHPNNEPGI 481
EA++L EP +
Sbjct: 124 GMAKEADKLFWGMRKMGIEPNV 145
>gi|223635748|sp|Q9LVQ5.2|PP432_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g55840
Length = 1096
Score = 147 bits (371), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 97/396 (24%), Positives = 188/396 (47%), Gaps = 12/396 (3%)
Query: 63 VLGTLVRLKQ-LKKWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSF 121
+LG++V+ + + W+ + E+L+ FN +LI +G F K+ ++
Sbjct: 164 ILGSVVKSGEDVSVWSFLKEMLKRKICPDVATFN-----ILINVLCAEGSFEKSSYLMQK 218
Query: 122 MNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANK 181
M K GYAP++V++ ++ Y + GR+K A + M+S G TY +++ +N+
Sbjct: 219 MEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNR 278
Query: 182 FKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVT 241
+ ++ L D K + P++ ++ +I + G A +L M G+ + VT
Sbjct: 279 IAKG---YLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVT 335
Query: 242 YNSLMS---FETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEML 298
+N+L+ E N+KE K++ M+ GL P VSY +L++ K + A + M
Sbjct: 336 FNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMK 395
Query: 299 DAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDME 358
GV Y ++D +G +D+A + M +D PDI +Y+ +++ + +
Sbjct: 396 RNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFK 455
Query: 359 GAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIM 418
A++ R+ + G PN I Y TLI ++ L++ + IY+ M + G + F ++
Sbjct: 456 TAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLV 515
Query: 419 DAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLS 454
+ K A + + M S G P+ + + L++
Sbjct: 516 TSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLIN 551
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 87/396 (21%), Positives = 173/396 (43%), Gaps = 7/396 (1%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
+E+ + +L+ K +F+ A M + G +++T +++ + G A +
Sbjct: 367 SEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLL 426
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
M G P +TY ++ F + +FK A+E+ + + L P+ ++ +IY
Sbjct: 427 NEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIY---RVGLSPNGIIYSTLIYNC 483
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSK---IYDQMQRAGLQPDV 271
+ G ++A +++ M G + T+N L++ +V++ M G+ P+
Sbjct: 484 CRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNT 543
Query: 272 VSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKC 331
VS+ LIN YG + +A +VF+EM G PT Y LL G + +A K
Sbjct: 544 VSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKS 603
Query: 332 MRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNN 391
+ + D Y T+L+A + ++ A F + Q +P+ TY +LI G +
Sbjct: 604 LHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGK 663
Query: 392 LEKMMEIYDKMRVNG-IKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKN 450
+ + G + PN+ ++T +D K + + + + ++M++ G PD N
Sbjct: 664 TVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTN 723
Query: 451 ILLSLAKTADERNEANELLGNFNHPNNEPGINGLSI 486
++ + + N+LL + N P + +I
Sbjct: 724 AMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNI 759
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 91/367 (24%), Positives = 174/367 (47%), Gaps = 14/367 (3%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
NE+ + LI + +G A ++L+ M G +P+ V+ AL++ + G +K A +F
Sbjct: 297 NEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMF 356
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
M++ G PS ++Y ++L + +F A +M + +++ + + + MI
Sbjct: 357 YMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRM---KRNGVCVGRITYTGMIDGL 413
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSLMS-------FETNYKEVSKIYDQMQRAGL 267
K G ++A L M++ G+ VTY++L++ F+T + V +IY R GL
Sbjct: 414 CKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIY----RVGL 469
Query: 268 QPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQART 327
P+ + Y+ LI + +EA+ ++E M+ G H +N+L+ + +G V +A
Sbjct: 470 SPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEE 529
Query: 328 VFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYA 387
+CM D P+ S+ +++ Y N+ + A F + + G P TYG+L+KG
Sbjct: 530 FMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLC 589
Query: 388 KVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQK 447
K +L + + + + ++ T++ A K+ + AV + EM PD
Sbjct: 590 KGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSY 649
Query: 448 AKNILLS 454
L+S
Sbjct: 650 TYTSLIS 656
Score = 125 bits (313), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 85/320 (26%), Positives = 150/320 (46%), Gaps = 8/320 (2%)
Query: 129 PSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEV 188
PSV + L+ Y R G +++ IFR M G PS T IL V++ E V
Sbjct: 123 PSV--YDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSG---EDVSV 177
Query: 189 FMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSF 248
+ L + K + PD F+++I + G +EK+ L M + G + VTYN+++ +
Sbjct: 178 WSFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHW 237
Query: 249 ---ETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPT 305
+ +K ++ D M+ G+ DV +Y +LI+ ++ R + + +M + P
Sbjct: 238 YCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPN 297
Query: 306 HKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFR 365
YN L++ F+ G V A + M SP+ ++ ++ +++ + + A K F
Sbjct: 298 EVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFY 357
Query: 366 RLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNK 425
++ G P+ ++YG L+ G K + Y +M+ NG+ + +T ++D KN
Sbjct: 358 MMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNG 417
Query: 426 DFDSAVVWYKEMESCGFPPD 445
D AVV EM G PD
Sbjct: 418 FLDEAVVLLNEMSKDGIDPD 437
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 87/389 (22%), Positives = 166/389 (42%), Gaps = 52/389 (13%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
+I K G ++A +L+ M+K G P +V+++AL+ + + GR+K A+ I R+ G
Sbjct: 409 MIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVG 468
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
P+ + Y ++ KEA ++ ++ E + D F++++ KAG
Sbjct: 469 LSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTR---DHFTFNVLVTSLCKAGKVA 525
Query: 222 KARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSK---IYDQMQRAGLQP--------- 269
+A + M G+ +TV+++ L++ N E K ++D+M + G P
Sbjct: 526 EAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLL 585
Query: 270 --------------------------DVVSYALLINAYGKARREEEALAVFEEMLDAGVR 303
D V Y L+ A K+ +A+++F EM+ +
Sbjct: 586 KGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSIL 645
Query: 304 PTHKAYNILLDAFAISGMVDQARTVFKCM------RRDRCSPDICSYTTMLSAYVNASDM 357
P Y L ISG+ + +TV + R P+ YT + A
Sbjct: 646 PDSYTYTSL-----ISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQW 700
Query: 358 EGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTI 417
+ F ++ G P+++T +I GY+++ +EK ++ +M PN T + +
Sbjct: 701 KAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNIL 760
Query: 418 MDAYGKNKDFDSAVVWYKEMESCGFPPDQ 446
+ Y K KD ++ + Y+ + G PD+
Sbjct: 761 LHGYSKRKDVSTSFLLYRSIILNGILPDK 789
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 83/351 (23%), Positives = 159/351 (45%), Gaps = 8/351 (2%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + F LI + +G+F +A K+ M KG PS VS+ L++ + + A +
Sbjct: 332 NHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFY 391
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDE-EKSPLKPDQKMFHMMIYM 213
RM+ +G +TY ++ + EA + LL+E K + PD + +I
Sbjct: 392 MRMKRNGVCVGRITYTGMIDGLCKNGFLDEA----VVLLNEMSKDGIDPDIVTYSALING 447
Query: 214 YKKAGGYEKARKLFALMAERGVQQSTVTYNSLM---SFETNYKEVSKIYDQMQRAGLQPD 270
+ K G ++ A+++ + G+ + + Y++L+ KE +IY+ M G D
Sbjct: 448 FCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRD 507
Query: 271 VVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFK 330
++ +L+ + KA + EA M G+ P +++ L++ + SG +A +VF
Sbjct: 508 HFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFD 567
Query: 331 CMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVN 390
M + P +Y ++L + AEKF + L + + Y TL+ K
Sbjct: 568 EMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSG 627
Query: 391 NLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCG 441
NL K + ++ +M I P+ +T+++ + A+++ KE E+ G
Sbjct: 628 NLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARG 678
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 99/467 (21%), Positives = 175/467 (37%), Gaps = 89/467 (19%)
Query: 59 PKDLVLGTLV----RLKQLKKWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNK 114
P ++ TL+ R+ LK+ + E + I + F +L+T+ K G +
Sbjct: 471 PNGIIYSTLIYNCCRMGCLKEAIRIYEAM----ILEGHTRDHFTFNVLVTSLCKAGKVAE 526
Query: 115 AEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILK 174
AE+ + M G P+ VS L+ YG G A ++F M G P+ TY +LK
Sbjct: 527 AEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLK 586
Query: 175 LFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERG 234
+ +EAE+ +L P D M++ ++ K+G KA LF M +R
Sbjct: 587 GLCKGGHLREAEKFLKSL---HAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRS 643
Query: 235 VQQSTVTYNSLMS--------------------------------------FETN-YKEV 255
+ + TY SL+S F+ +K
Sbjct: 644 ILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAG 703
Query: 256 SKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDA 315
+QM G PD+V+ +I+ Y + + E+ + EM + P YNILL
Sbjct: 704 IYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLH- 762
Query: 316 FAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPN 375
Y D+ + +R + +G +P+
Sbjct: 763 ----------------------------------GYSKRKDVSTSFLLYRSIILNGILPD 788
Query: 376 VITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYK 435
+T +L+ G + N LE ++I G++ ++ F ++ N + + A K
Sbjct: 789 KLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVK 848
Query: 436 EMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGIN 482
M S G D+ + ++S+ E+ +L H ++ GI+
Sbjct: 849 VMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVL----HEMSKQGIS 891
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 70/345 (20%), Positives = 149/345 (43%), Gaps = 7/345 (2%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
+I Y + G K +L M + P++ ++ L+ Y + + ++R + +G
Sbjct: 725 MIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNG 784
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
P LT ++ E+N + ++ + ++ D+ F+M+I G
Sbjct: 785 ILPDKLTCHSLVLGICESNMLEIGLKILKAFICR---GVEVDRYTFNMLISKCCANGEIN 841
Query: 222 KARKLFALMAERGVQQSTVTYNSLMSF---ETNYKEVSKIYDQMQRAGLQPDVVSYALLI 278
A L +M G+ T ++++S ++E + +M + G+ P+ Y LI
Sbjct: 842 WAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLI 901
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCS 338
N + + A V EEM+ + P + A + ++ A A G D+A + + M + +
Sbjct: 902 NGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEATLLLRFMLKMKLV 961
Query: 339 PDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEI 398
P I S+TT++ ++ A + + G ++++Y LI G ++ E+
Sbjct: 962 PTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDLVSYNVLITGLCAKGDMALAFEL 1021
Query: 399 YDKMRVNGIKPNQTIFTTIMDA-YGKNKDFDSAVVWYKEMESCGF 442
Y++M+ +G N T + ++ + F A + K++ + GF
Sbjct: 1022 YEEMKGDGFLANATTYKALIRGLLARETAFSGADIILKDLLARGF 1066
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 70/335 (20%), Positives = 139/335 (41%), Gaps = 6/335 (1%)
Query: 122 MNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANK 181
M+ G+ P +V+ A+++ Y R G+ + + M + P+ TY I+L + +K
Sbjct: 710 MDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGY---SK 766
Query: 182 FKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVT 241
K+ F+ + + PD+ H ++ ++ E K+ RGV+ T
Sbjct: 767 RKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYT 826
Query: 242 YNSLMSFETNYKEVSKIYDQ---MQRAGLQPDVVSYALLINAYGKARREEEALAVFEEML 298
+N L+S E++ +D M G+ D + +++ + R +E+ V EM
Sbjct: 827 FNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMS 886
Query: 299 DAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDME 358
G+ P + Y L++ G + A V + M + P + + M+ A +
Sbjct: 887 KQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKAD 946
Query: 359 GAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIM 418
A R + + VP + ++ TL+ K N+ + +E+ M G+K + + ++
Sbjct: 947 EATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDLVSYNVLI 1006
Query: 419 DAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILL 453
D A Y+EM+ GF + L+
Sbjct: 1007 TGLCAKGDMALAFELYEEMKGDGFLANATTYKALI 1041
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/197 (22%), Positives = 83/197 (42%)
Query: 257 KIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAF 316
+I+ M G P V + ++ + K+ + + +EML + P +NIL++
Sbjct: 144 EIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSFLKEMLKRKICPDVATFNILINVL 203
Query: 317 AISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNV 376
G +++ + + M + +P I +Y T+L Y + A + +K G +V
Sbjct: 204 CAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADV 263
Query: 377 ITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKE 436
TY LI + N + K + MR I PN+ + T+++ + A E
Sbjct: 264 CTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNE 323
Query: 437 MESCGFPPDQKAKNILL 453
M S G P+ N L+
Sbjct: 324 MLSFGLSPNHVTFNALI 340
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/187 (18%), Positives = 82/187 (43%), Gaps = 2/187 (1%)
Query: 268 QPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQART 327
P V Y +LI Y + +++L +F M G P+ N +L + SG +
Sbjct: 122 NPSV--YDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWS 179
Query: 328 VFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYA 387
K M + + PD+ ++ +++ E + +++++ G+ P ++TY T++ Y
Sbjct: 180 FLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYC 239
Query: 388 KVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQK 447
K + +E+ D M+ G+ + + ++ ++ + ++M P++
Sbjct: 240 KKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEV 299
Query: 448 AKNILLS 454
N L++
Sbjct: 300 TYNTLIN 306
>gi|356554513|ref|XP_003545590.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g25630-like [Glycine max]
Length = 632
Score = 147 bits (371), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 96/360 (26%), Positives = 176/360 (48%), Gaps = 9/360 (2%)
Query: 99 FLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQ 158
+ L+ A Q F ++S + +K P + AL+ A+ G ++A+ + ++M+
Sbjct: 110 YTTLLNALTTQKYFKPIHSIVSLVEEKQMKPDSIFFNALINAFAESGNMEDAKKVVQKMK 169
Query: 159 SSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLD--EEKSPLKPDQKMFHMMIYMYKK 216
SG +PSA TY ++K + A K E+ M LLD + +KP+ K ++M+I K
Sbjct: 170 ESGLKPSACTYNTLIKGYGIAGKPDES----MKLLDLMSTEGNVKPNLKTYNMLIRALCK 225
Query: 217 AGGYEKARKLFALMAERGVQQSTVTYNSL-MSFETNYK--EVSKIYDQMQRAGLQPDVVS 273
+A + M G+Q VT+N++ ++ N K + + +MQR L+P+ +
Sbjct: 226 MENISEAWNVVYKMTASGMQPDVVTFNTIATAYAQNGKTAQAEAMILEMQRNSLKPNERT 285
Query: 274 YALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMR 333
++I+ Y + + +EAL M D G++P N L++ F D V K M
Sbjct: 286 CTIIISGYCREGKVQEALRFVYRMKDLGMQPNLIVLNSLVNGFVDMMDRDGVDEVLKLME 345
Query: 334 RDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLE 393
+ PD+ +Y+T+++A+ A +E ++ + + + G P+ Y L KGY + +E
Sbjct: 346 EFQIRPDVITYSTIMNAWSQAGFLEKCKEIYNNMLKSGVKPDAHAYSILAKGYVRAQEME 405
Query: 394 KMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILL 453
K E+ M +G+ PN IFTT++ + D+A+ + +M G P+ K L+
Sbjct: 406 KAEEMLTVMTKSGVHPNVVIFTTVISGWCSVGRMDNAMRVFDKMGEFGVSPNLKTFETLI 465
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 98/354 (27%), Positives = 171/354 (48%), Gaps = 11/354 (3%)
Query: 131 VVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFM 190
V S T +M + G+ + A IF+ + G +PS TY +L FK + +
Sbjct: 72 VRSRTKVMNILIKSGKPQEAIVIFQNLIEGGHQPSLATYTTLLNALTTQKYFKPIHSI-V 130
Query: 191 TLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLM---S 247
+L++E++ +KPD F+ +I + ++G E A+K+ M E G++ S TYN+L+
Sbjct: 131 SLVEEKQ--MKPDSIFFNALINAFAESGNMEDAKKVVQKMKESGLKPSACTYNTLIKGYG 188
Query: 248 FETNYKEVSKIYDQMQRAG-LQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTH 306
E K+ D M G ++P++ +Y +LI A K EA V +M +G++P
Sbjct: 189 IAGKPDESMKLLDLMSTEGNVKPNLKTYNMLIRALCKMENISEAWNVVYKMTASGMQPDV 248
Query: 307 KAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRR 366
+N + A+A +G QA + M+R+ P+ + T ++S Y ++ A +F R
Sbjct: 249 VTFNTIATAYAQNGKTAQAEAMILEMQRNSLKPNERTCTIIISGYCREGKVQEALRFVYR 308
Query: 367 LKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKD 426
+K G PN+I +L+ G+ + + + + E+ M I+P+ ++TIM+A+ +
Sbjct: 309 MKDLGMQPNLIVLNSLVNGFVDMMDRDGVDEVLKLMEEFQIRPDVITYSTIMNAWSQAGF 368
Query: 427 FDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFN----HPN 476
+ Y M G PD A +IL A E +A E+L HPN
Sbjct: 369 LEKCKEIYNNMLKSGVKPDAHAYSILAKGYVRAQEMEKAEEMLTVMTKSGVHPN 422
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 78/327 (23%), Positives = 155/327 (47%), Gaps = 47/327 (14%)
Query: 101 MLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSS 160
MLI A K + ++A V+ M G P VV+ + AY + G+ AEA+ MQ +
Sbjct: 218 MLIRALCKMENISEAWNVVYKMTASGMQPDVVTFNTIATAYAQNGKTAQAEAMILEMQRN 277
Query: 161 GPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGY 220
+P+ T II+ + K +EA + ++Y+
Sbjct: 278 SLKPNERTCTIIISGYCREGKVQEA------------------------LRFVYR----- 308
Query: 221 EKARKLFALMAERGVQQSTVTYNSLMSFETNYKE---VSKIYDQMQRAGLQPDVVSYALL 277
M + G+Q + + NSL++ + + V ++ M+ ++PDV++Y+ +
Sbjct: 309 ---------MKDLGMQPNLIVLNSLVNGFVDMMDRDGVDEVLKLMEEFQIRPDVITYSTI 359
Query: 278 INAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRC 337
+NA+ +A E+ ++ ML +GV+P AY+IL + + +++A + M +
Sbjct: 360 MNAWSQAGFLEKCKEIYNNMLKSGVKPDAHAYSILAKGYVRAQEMEKAEEMLTVMTKSGV 419
Query: 338 SPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNN---LEK 394
P++ +TT++S + + M+ A + F ++ + G PN+ T+ TLI GYA+ E
Sbjct: 420 HPNVVIFTTVISGWCSVGRMDNAMRVFDKMGEFGVSPNLKTFETLIWGYAEAKQPWKAEG 479
Query: 395 MMEIYDKMRVNGIKPNQTIFTTIMDAY 421
M++I ++ V +P ++ + +A+
Sbjct: 480 MLQIMEEFHV---QPKKSTILLVAEAW 503
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 69/312 (22%), Positives = 148/312 (47%), Gaps = 12/312 (3%)
Query: 61 DLVLGTLVRLKQLKK-WNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVL 119
++++ L +++ + + WNVV ++ S + + F + TAY + G +AE ++
Sbjct: 217 NMLIRALCKMENISEAWNVVYKM-----TASGMQPDVVTFNTIATAYAQNGKTAQAEAMI 271
Query: 120 SFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEA 179
M + P+ + T ++ Y R G+ + A RM+ G +P+ + ++ FV+
Sbjct: 272 LEMQRNSLKPNERTCTIIISGYCREGKVQEALRFVYRMKDLGMQPNLIVLNSLVNGFVDM 331
Query: 180 NKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQST 239
+EV + L++E + ++PD + ++ + +AG EK ++++ M + GV+
Sbjct: 332 MDRDGVDEV-LKLMEEFQ--IRPDVITYSTIMNAWSQAGFLEKCKEIYNNMLKSGVKPDA 388
Query: 240 VTYNSLMSFETNYKEVSK---IYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEE 296
Y+ L +E+ K + M ++G+ P+VV + +I+ + R + A+ VF++
Sbjct: 389 HAYSILAKGYVRAQEMEKAEEMLTVMTKSGVHPNVVIFTTVISGWCSVGRMDNAMRVFDK 448
Query: 297 MLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASD 356
M + GV P K + L+ +A + +A + + M P + + A+ A
Sbjct: 449 MGEFGVSPNLKTFETLIWGYAEAKQPWKAEGMLQIMEEFHVQPKKSTILLVAEAWRFAGF 508
Query: 357 MEGAEKFFRRLK 368
E A+ R +K
Sbjct: 509 KERAKTLLRTVK 520
>gi|440800754|gb|ELR21789.1| pentatricopeptide repeat domain/PPR repeatcontaining protein
[Acanthamoeba castellanii str. Neff]
Length = 559
Score = 147 bits (371), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 78/329 (23%), Positives = 162/329 (49%), Gaps = 4/329 (1%)
Query: 99 FLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQ 158
F +L+ YG+ GD + +V M + G P + ++T L++A+G+ G + + M+
Sbjct: 101 FDVLLQGYGRAGDRQRLAQVQRDMREVGVRPGMSTYTILIDAWGKAGDLRRMWQAWEDMR 160
Query: 159 SSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAG 218
G RP+ + Y ++ + E F + ++P++ ++ M++ Y +
Sbjct: 161 EQGLRPNVVVYTSVIATLGKLGDVAAMERTFAEMQRSSGDGVEPNRTTYNAMVHSYGQQQ 220
Query: 219 GYEKARKLFALM-AERGVQQSTVTYNSLMSFETNYKEVSKI---YDQMQRAGLQPDVVSY 274
+K L M A+ G+ T++++++ + V K +D + G QP + ++
Sbjct: 221 MMDKMEALVERMRADPGLGLDNFTHSAVVAAWSRAGRVDKALEAFDSIAATGGQPSLHAW 280
Query: 275 ALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRR 334
+++ G A R +E L ++M GV+P+ YN +++AF + + FK MRR
Sbjct: 281 TAILHMLGTAGRSDEMLRTLDKMKRLGVKPSTAVYNTIINAFGKARNIHSMMDTFKAMRR 340
Query: 335 DRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEK 394
D + D+ +Y T++ + AEKF+ +K++G P + T +L+ Y + + EK
Sbjct: 341 DGVAADVKTYNTLIDTWAKTGKAVEAEKFYVLMKREGLQPTMYTIASLMDAYTRADQFEK 400
Query: 395 MMEIYDKMRVNGIKPNQTIFTTIMDAYGK 423
++ + +M+ G P+ +F ++D YG+
Sbjct: 401 VLRLISRMKKEGRAPDNVVFNLLIDTYGR 429
Score = 119 bits (299), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 81/340 (23%), Positives = 156/340 (45%), Gaps = 10/340 (2%)
Query: 137 LMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEE 196
L++ YGR G + + R M+ G RP TY I++ + +A + ++ D
Sbjct: 104 LLQGYGRAGDRQRLAQVQRDMREVGVRPGMSTYTILIDAWGKAGDLRR---MWQAWEDMR 160
Query: 197 KSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAER---GVQQSTVTYNSLMSFETNYK 253
+ L+P+ ++ +I K G + FA M GV+ + TYN+++ +
Sbjct: 161 EQGLRPNVVVYTSVIATLGKLGDVAAMERTFAEMQRSSGDGVEPNRTTYNAMVHSYGQQQ 220
Query: 254 EVSKIYDQMQR----AGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAY 309
+ K+ ++R GL D +++ ++ A+ +A R ++AL F+ + G +P+ A+
Sbjct: 221 MMDKMEALVERMRADPGLGLDNFTHSAVVAAWSRAGRVDKALEAFDSIAATGGQPSLHAW 280
Query: 310 NILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQ 369
+L +G D+ M+R P Y T+++A+ A ++ F+ +++
Sbjct: 281 TAILHMLGTAGRSDEMLRTLDKMKRLGVKPSTAVYNTIINAFGKARNIHSMMDTFKAMRR 340
Query: 370 DGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDS 429
DG +V TY TLI +AK + + Y M+ G++P ++MDAY + F+
Sbjct: 341 DGVAADVKTYNTLIDTWAKTGKAVEAEKFYVLMKREGLQPTMYTIASLMDAYTRADQFEK 400
Query: 430 AVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELL 469
+ M+ G PD N+L+ + EA ++L
Sbjct: 401 VLRLISRMKKEGRAPDNVVFNLLIDTYGRMGKPEEAEKVL 440
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 71/273 (26%), Positives = 131/273 (47%), Gaps = 8/273 (2%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
++ A+ + G +KA + + G PS+ + TA++ G GR +M+ G
Sbjct: 248 VVAAWSRAGRVDKALEAFDSIAATGGQPSLHAWTAILHMLGTAGRSDEMLRTLDKMKRLG 307
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
+PS Y I+ F +A + F + + + D K ++ +I + K G
Sbjct: 308 VKPSTAVYNTIINAFGKARNIHSMMDTFKAM---RRDGVAADVKTYNTLIDTWAKTGKAV 364
Query: 222 KARKLFALMAERGVQQSTVTYNSLMSFET---NYKEVSKIYDQMQRAGLQPDVVSYALLI 278
+A K + LM G+Q + T SLM T +++V ++ +M++ G PD V + LLI
Sbjct: 365 EAEKFYVLMKREGLQPTMYTIASLMDAYTRADQFEKVLRLISRMKKEGRAPDNVVFNLLI 424
Query: 279 NAYGKARREEEALAVF-EEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRC 337
+ YG+ + EEA V M + G+ + +++A+A +G +D+A M D
Sbjct: 425 DTYGRMGKPEEAEKVLCGAMKEYGIALETNNFTSVIEAWARNGNLDKAEEWLHRMNTDYA 484
Query: 338 S-PDICSYTTMLSAYVNASDMEGAEKFFRRLKQ 369
+ PDI + TT+LS + A+D++ + ++Q
Sbjct: 485 TKPDIKTLTTLLSFCIPAADVKRGRRVIHMIEQ 517
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/173 (23%), Positives = 80/173 (46%), Gaps = 6/173 (3%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
LI + K G +AEK M ++G P++ + +LM+AY R +++ + RM+ G
Sbjct: 353 LIDTWAKTGKAVEAEKFYVLMKREGLQPTMYTIASLMDAYTRADQFEKVLRLISRMKKEG 412
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
P + + +++ + K +EAE+V + E L+ + F +I + + G +
Sbjct: 413 RAPDNVVFNLLIDTYGRMGKPEEAEKVLCGAMKEYGIALETNN--FTSVIEAWARNGNLD 470
Query: 222 KARKLFALM-AERGVQQSTVTYNSLMSF---ETNYKEVSKIYDQMQRAGLQPD 270
KA + M + + T +L+SF + K ++ +++ LQ D
Sbjct: 471 KAEEWLHRMNTDYATKPDIKTLTTLLSFCIPAADVKRGRRVIHMIEQHKLQKD 523
>gi|410110105|gb|AFV61132.1| pentatricopeptide repeat-containing protein 123, partial [Lippia
aristata]
Length = 382
Score = 147 bits (371), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 98/374 (26%), Positives = 182/374 (48%), Gaps = 37/374 (9%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
LI K D++KA + S + + G+ P +V++ A++ +G+ ++ A ++ M+++G
Sbjct: 11 LIELSRKLCDYSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLIGEMKAAG 70
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
P+ +Y +L ++VE KF EA VF + + E K L D ++MI +Y + G +
Sbjct: 71 VMPNTXSYSTLLTMYVENKKFLEALSVF-SEMREIKCLL--DLTTCNIMIDVYGQLGMAK 127
Query: 222 KARKLFALMAERGVQQSTVTYNSLMSFETN---YKEVSKIYDQMQRAGLQPDVVSYALLI 278
+A KLF M + G++ + V+YN+L+ + + E ++ MQR ++ +VV+Y ++
Sbjct: 128 EADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMM 187
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCS 338
YGK E+A + +EM G+ P Y+ ++ + G +D+A +F+ +R
Sbjct: 188 MIYGKTLEHEKANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGIE 247
Query: 339 PDICSYTTMLSAY-------------------------------VNASDMEGAEKFFRRL 367
D + TM+ AY A +E A FR+
Sbjct: 248 IDQILFQTMIVAYERAGLVAHAKRLLHELKRPDNIPRDTAIHILAGAGRIEEATYVFRQA 307
Query: 368 KQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDF 427
G V ++ + +I +K ++E++DKMR G P+ + +++AYGK ++F
Sbjct: 308 IDAGEVKDITVFERMIHLLSKYKKYSNVVEVFDKMRGLGYFPDSDVIAIVLNAYGKLQEF 367
Query: 428 DSAVVWYKEMESCG 441
D A Y EM+ G
Sbjct: 368 DKANDVYMEMQEVG 381
Score = 115 bits (288), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 76/278 (27%), Positives = 129/278 (46%), Gaps = 38/278 (13%)
Query: 240 VTYNSLMSFE---TNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEE 296
V Y++L+ +Y + I+ +++R+G PD+V+Y +IN +GKA+ EA ++ E
Sbjct: 6 VLYSNLIELSRKLCDYSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLIGE 65
Query: 297 MLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASD 356
M AGV P +Y+ LL + + +A +VF MR +C D+ + M+ Y
Sbjct: 66 MKAAGVMPNTXSYSTLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGM 125
Query: 357 MEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKV---------------NNLEK------- 394
+ A+K F +++ G PNV++Y TL++ Y N+E+
Sbjct: 126 AKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNS 185
Query: 395 MMEIYDK-------------MRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCG 441
MM IY K M+ GI+PN ++TI+ +GK D A + ++++ S G
Sbjct: 186 MMMIYGKTLEHEKANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSG 245
Query: 442 FPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEP 479
DQ ++ + A A LL P+N P
Sbjct: 246 IEIDQILFQTMIVAYERAGLVAHAKRLLHELKRPDNIP 283
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 59/244 (24%), Positives = 115/244 (47%), Gaps = 6/244 (2%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + + L+ YG F +A + M +K +VV++ ++M YG+ ++ A +
Sbjct: 144 NVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLI 203
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
+ MQS G P+++TY I+ ++ + K A +F L S ++ DQ +F MI Y
Sbjct: 204 QEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKL---RSSGIEIDQILFQTMIVAY 260
Query: 215 KKAGGYEKARKLFA-LMAERGVQQSTVTYNSLMSFETNYKEVSKIYDQMQRAGLQPDVVS 273
++AG A++L L + + T + +++ +E + ++ Q AG D+
Sbjct: 261 ERAGLVAHAKRLLHELKRPDNIPRDTAIH--ILAGAGRIEEATYVFRQAIDAGEVKDITV 318
Query: 274 YALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMR 333
+ +I+ K ++ + VF++M G P I+L+A+ D+A V+ M+
Sbjct: 319 FERMIHLLSKYKKYSNVVEVFDKMRGLGYFPDSDVIAIVLNAYGKLQEFDKANDVYMEMQ 378
Query: 334 RDRC 337
C
Sbjct: 379 EVGC 382
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 34/142 (23%), Positives = 62/142 (43%)
Query: 340 DICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIY 399
D+ Y+ ++ D A F RLK+ GF P+++ Y +I + K + +
Sbjct: 4 DLVLYSNLIELSRKLCDYSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLI 63
Query: 400 DKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTA 459
+M+ G+ PN ++T++ Y +NK F A+ + EM D NI++ +
Sbjct: 64 GEMKAAGVMPNTXSYSTLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQL 123
Query: 460 DERNEANELLGNFNHPNNEPGI 481
EA++L EP +
Sbjct: 124 GMAKEADKLFWGMRKMGIEPNV 145
>gi|302757207|ref|XP_002962027.1| hypothetical protein SELMODRAFT_77588 [Selaginella moellendorffii]
gi|300170686|gb|EFJ37287.1| hypothetical protein SELMODRAFT_77588 [Selaginella moellendorffii]
Length = 814
Score = 147 bits (371), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 97/372 (26%), Positives = 176/372 (47%), Gaps = 9/372 (2%)
Query: 99 FLMLITAYGKQGDFNKAEKVLSFMNKKGYAPS-VVSHTALMEAYGRGGRYKNAEAIFRRM 157
FL+L+ K G KA +V M G+ P HTA++ + R K A +F +M
Sbjct: 192 FLILVDCLCKAGMDEKAFEVFHEMMAMGFVPPDRALHTAMVRTLLKAKRVKEAREVFGQM 251
Query: 158 QSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKA 217
+ G P A+ Y ++ +A +EA +V +L + P + + +++ KA
Sbjct: 252 EKCGFPPDAIAYNTMIDGLAKAGHAQEALKVLDNMLAK---ACVPTEVTYGILVNSLCKA 308
Query: 218 GGYEKARKLFALMAERGVQQSTVTYNSLM---SFETNYKEVSKIYDQMQRAGLQPDVVSY 274
G E+A +LF +MA G + ++V Y SL+ + KE ++D+M AG +PDV+++
Sbjct: 309 GTLERAEELFRVMAASGFRPNSVIYTSLIHGFAKSGRMKEACSLFDEMVEAGYRPDVITH 368
Query: 275 ALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRR 334
++I+ K+ E+A FEEM+ G +P Y ++ + G V A + K M
Sbjct: 369 TVMIDGLCKSGNFEQAAKSFEEMMRGGCKPNVVTYTTIIQGLSKIGRVANAFRIMKGMIA 428
Query: 335 DRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEK 394
C PD +Y +L + ++ A + L + PN+ Y +L+KG ++E
Sbjct: 429 HGCFPDSVTYICLLDGFCKLGRLDEAAQLLDELDKCSSSPNLQLYSSLVKGLCDGGSVEN 488
Query: 395 MM-EIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILL 453
+ +++++ + + + +I+ K D A ++ M S G PD NIL+
Sbjct: 489 TLDDLFEQSKAAAENLDPGLCCSIIVGLCKTGRLDEACRIFQRMVSEGCKPDATTYNILI 548
Query: 454 S-LAKTADERNE 464
+ L ++ + R E
Sbjct: 549 NGLCRSRENRVE 560
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 98/385 (25%), Positives = 171/385 (44%), Gaps = 9/385 (2%)
Query: 124 KKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFK 183
+ G+ V ++ LM Y AI M +G P+ ++ I+++ F +
Sbjct: 112 QAGFQHDVFTYNCLMNLLVAEKNYSQCYAIHEEMLKAGIAPNTFSFNILIRSFARTRRAD 171
Query: 184 EAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGV-----QQS 238
+A F + ++ KPD F +++ KAG EKA ++F M G
Sbjct: 172 DAVTCFEIM---KRKRCKPDLHTFLILVDCLCKAGMDEKAFEVFHEMMAMGFVPPDRALH 228
Query: 239 TVTYNSLMSFETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEML 298
T +L+ + KE +++ QM++ G PD ++Y +I+ KA +EAL V + ML
Sbjct: 229 TAMVRTLLKAK-RVKEAREVFGQMEKCGFPPDAIAYNTMIDGLAKAGHAQEALKVLDNML 287
Query: 299 DAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDME 358
PT Y IL+++ +G +++A +F+ M P+ YT+++ + + M+
Sbjct: 288 AKACVPTEVTYGILVNSLCKAGTLERAEELFRVMAASGFRPNSVIYTSLIHGFAKSGRMK 347
Query: 359 GAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIM 418
A F + + G+ P+VIT+ +I G K N E+ + +++M G KPN +TTI+
Sbjct: 348 EACSLFDEMVEAGYRPDVITHTVMIDGLCKSGNFEQAAKSFEEMMRGGCKPNVVTYTTII 407
Query: 419 DAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNE 478
K +A K M + G PD LL +EA +LL + ++
Sbjct: 408 QGLSKIGRVANAFRIMKGMIAHGCFPDSVTYICLLDGFCKLGRLDEAAQLLDELDKCSSS 467
Query: 479 PGINGLSISVDEEDDDDDDDEDDDD 503
P + S V D + DD
Sbjct: 468 PNLQLYSSLVKGLCDGGSVENTLDD 492
Score = 125 bits (314), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 97/416 (23%), Positives = 171/416 (41%), Gaps = 45/416 (10%)
Query: 51 ERTRGQPLPKDLVLGTLVRLKQLKKWNVVSEVLEWLR--IQSWWDFNEMDFLMLITAYGK 108
E RG P + T++ + L K V+ ++ I + + ++ L+ + K
Sbjct: 390 EMMRGGCKPNVVTYTTII--QGLSKIGRVANAFRIMKGMIAHGCFPDSVTYICLLDGFCK 447
Query: 109 QGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKN------------------- 149
G ++A ++L ++K +P++ +++L++ GG +N
Sbjct: 448 LGRLDEAAQLLDELDKCSSSPNLQLYSSLVKGLCDGGSVENTLDDLFEQSKAAAENLDPG 507
Query: 150 -----------------AEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTL 192
A IF+RM S G +P A TY I++ + + E F L
Sbjct: 508 LCCSIIVGLCKTGRLDEACRIFQRMVSEGCKPDATTYNILINGLCRSRE-NRVERAFALL 566
Query: 193 LDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSL---MSFE 249
D E PD + + K G ++A K+ + RG V Y +L + ++
Sbjct: 567 HDLEMVGYLPDAVTYTPLCIGLCKIGEVDRAVKMLEEASSRGWNADVVAYTALCTGLCYQ 626
Query: 250 TNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAY 309
++ +M R G PD +Y +IN K ++ E+A F+EM+ G +PT Y
Sbjct: 627 GQVDRAVSLFQEMVRQGGAPDAAAYCCIINGLIKGKKLEDACKFFDEMIGKGQKPTVATY 686
Query: 310 NILLDAFAISGMVDQARTVFKCM-RRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLK 368
L+ A +G VD+A F+ M R + Y ++ + A ++ A K F +
Sbjct: 687 TALVQALCHAGNVDEAFHRFEGMLARGELVGSVMIYDALIHGFCKALKVDAALKLFEDMI 746
Query: 369 QDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKN 424
G VP +T +L G + EK E+ +M G P+ FT I+D K+
Sbjct: 747 SRGNVPTAVTSASLFDGLVRSGKTEKAQELLQEMAAGGSPPHAATFTAILDGLRKS 802
Score = 118 bits (296), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 97/422 (22%), Positives = 171/422 (40%), Gaps = 47/422 (11%)
Query: 101 MLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSS 160
++I K G+F +A K M + G P+VV++T +++ + GR NA I + M +
Sbjct: 370 VMIDGLCKSGNFEQAAKSFEEMMRGGCKPNVVTYTTIIQGLSKIGRVANAFRIMKGMIAH 429
Query: 161 GPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDE-EKSPLKPDQKMFHMM--------- 210
G P ++TY +L F + + EA + LLDE +K P+ +++ +
Sbjct: 430 GCFPDSVTYICLLDGFCKLGRLDEAAQ----LLDELDKCSSSPNLQLYSSLVKGLCDGGS 485
Query: 211 ---------------------------IYMYKKAGGYEKARKLFALMAERGVQQSTVTYN 243
I K G ++A ++F M G + TYN
Sbjct: 486 VENTLDDLFEQSKAAAENLDPGLCCSIIVGLCKTGRLDEACRIFQRMVSEGCKPDATTYN 545
Query: 244 SLM-----SFETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEML 298
L+ S E + + ++ G PD V+Y L K + A+ + EE
Sbjct: 546 ILINGLCRSRENRVERAFALLHDLEMVGYLPDAVTYTPLCIGLCKIGEVDRAVKMLEEAS 605
Query: 299 DAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDME 358
G AY L G VD+A ++F+ M R +PD +Y +++ + +E
Sbjct: 606 SRGWNADVVAYTALCTGLCYQGQVDRAVSLFQEMVRQGGAPDAAAYCCIINGLIKGKKLE 665
Query: 359 GAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNG-IKPNQTIFTTI 417
A KFF + G P V TY L++ N+++ ++ M G + + I+ +
Sbjct: 666 DACKFFDEMIGKGQKPTVATYTALVQALCHAGNVDEAFHRFEGMLARGELVGSVMIYDAL 725
Query: 418 MDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNN 477
+ + K D+A+ +++M S G P L + + +A ELL +
Sbjct: 726 IHGFCKALKVDAALKLFEDMISRGNVPTAVTSASLFDGLVRSGKTEKAQELLQEMAAGGS 785
Query: 478 EP 479
P
Sbjct: 786 PP 787
Score = 98.2 bits (243), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 61/263 (23%), Positives = 113/263 (42%), Gaps = 36/263 (13%)
Query: 263 QRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMV 322
++AG Q DV +Y L+N + + A+ EEML AG+ P ++NIL+ +FA +
Sbjct: 111 EQAGFQHDVFTYNCLMNLLVAEKNYSQCYAIHEEMLKAGIAPNTFSFNILIRSFARTRRA 170
Query: 323 DQARTVFKCMRRDRCSPDICSY------------------------------------TT 346
D A T F+ M+R RC PD+ ++ T
Sbjct: 171 DDAVTCFEIMKRKRCKPDLHTFLILVDCLCKAGMDEKAFEVFHEMMAMGFVPPDRALHTA 230
Query: 347 MLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNG 406
M+ + A ++ A + F ++++ GF P+ I Y T+I G AK + ++ +++ D M
Sbjct: 231 MVRTLLKAKRVKEAREVFGQMEKCGFPPDAIAYNTMIDGLAKAGHAQEALKVLDNMLAKA 290
Query: 407 IKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEAN 466
P + + ++++ K + A ++ M + GF P+ L+ + EA
Sbjct: 291 CVPTEVTYGILVNSLCKAGTLERAEELFRVMAASGFRPNSVIYTSLIHGFAKSGRMKEAC 350
Query: 467 ELLGNFNHPNNEPGINGLSISVD 489
L P + ++ +D
Sbjct: 351 SLFDEMVEAGYRPDVITHTVMID 373
Score = 62.0 bits (149), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 44/208 (21%), Positives = 90/208 (43%), Gaps = 5/208 (2%)
Query: 92 WDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAE 151
W+ + + + L T QG ++A + M ++G AP ++ ++ +G + ++A
Sbjct: 609 WNADVVAYTALCTGLCYQGQVDRAVSLFQEMVRQGGAPDAAAYCCIINGLIKGKKLEDAC 668
Query: 152 AIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMI 211
F M G +P+ TY +++ A EA F +L + L ++ +I
Sbjct: 669 KFFDEMIGKGQKPTVATYTALVQALCHAGNVDEAFHRFEGML--ARGELVGSVMIYDALI 726
Query: 212 YMYKKAGGYEKARKLFALMAERGVQQSTVTYNSL---MSFETNYKEVSKIYDQMQRAGLQ 268
+ + KA + A KLF M RG + VT SL + ++ ++ +M G
Sbjct: 727 HGFCKALKVDAALKLFEDMISRGNVPTAVTSASLFDGLVRSGKTEKAQELLQEMAAGGSP 786
Query: 269 PDVVSYALLINAYGKARREEEALAVFEE 296
P ++ +++ K+ + L + +E
Sbjct: 787 PHAATFTAILDGLRKSDESGKLLKLVQE 814
>gi|449530582|ref|XP_004172273.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g11690-like [Cucumis sativus]
Length = 505
Score = 147 bits (371), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 101/375 (26%), Positives = 187/375 (49%), Gaps = 12/375 (3%)
Query: 74 KKWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVS 133
+ W +E L R Q F+ F + I A+ + G+ +K ++L+ M G +P+V
Sbjct: 91 RTWGFFTEYLG--RTQ----FDVYSFWITIKAFCENGNVSKGFELLAQMETMGVSPNVFI 144
Query: 134 HTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLL 193
+T L+EA R G A+ +F RM G + Y I++ F + K+ E++ +
Sbjct: 145 YTILIEACCRNGDIDQAKVMFSRMDDLGLAANQYIYTIMINGFFKKGYKKDGFELYQKM- 203
Query: 194 DEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYK 253
+ + P+ ++ +I Y + G A K+F +++RGV + VTYN L+
Sbjct: 204 --KLVGVLPNLYTYNSLITEYCRDGKLSLAFKVFDEISKRGVACNAVTYNILIGGLCRKG 261
Query: 254 EVSK---IYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYN 310
+VSK + ++M+RA + P ++ +L++ + ++AL+ E++ G+ PT YN
Sbjct: 262 QVSKAEGLLERMKRAHINPTTRTFNMLMDGLCNTGQLDKALSYLEKLKLIGLCPTLVTYN 321
Query: 311 ILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQD 370
IL+ F+ G + + M SP +YT +++ +V + D+E A + F +K+
Sbjct: 322 ILISGFSKVGNSSVVSELVREMEDRGISPSKVTYTILMNTFVRSDDIEKAYEMFHLMKRI 381
Query: 371 GFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSA 430
G VP+ TYG LI G N+ + ++Y M ++PN I+ T+++ Y K + A
Sbjct: 382 GLVPDQHTYGVLIHGLCIKGNMVEASKLYKSMVEMHLQPNDVIYNTMINGYCKECNSYKA 441
Query: 431 VVWYKEMESCGFPPD 445
+ + +EM G P+
Sbjct: 442 LKFLEEMVKNGVTPN 456
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 82/351 (23%), Positives = 161/351 (45%), Gaps = 7/351 (1%)
Query: 121 FMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEAN 180
M KG++PS S ++ + G F + ++ I +K F E
Sbjct: 63 LMVLKGHSPSSFSFNNALDLLAKSGNLDRTWGFFTEYLGR-TQFDVYSFWITIKAFCENG 121
Query: 181 KFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTV 240
+ E+ L E + P+ ++ ++I + G ++A+ +F+ M + G+ +
Sbjct: 122 NVSKGFEL---LAQMETMGVSPNVFIYTILIEACCRNGDIDQAKVMFSRMDDLGLAANQY 178
Query: 241 TYNSLMS--FETNYKEVS-KIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEM 297
Y +++ F+ YK+ ++Y +M+ G+ P++ +Y LI Y + + A VF+E+
Sbjct: 179 IYTIMINGFFKKGYKKDGFELYQKMKLVGVLPNLYTYNSLITEYCRDGKLSLAFKVFDEI 238
Query: 298 LDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDM 357
GV YNIL+ G V +A + + M+R +P ++ ++ N +
Sbjct: 239 SKRGVACNAVTYNILIGGLCRKGQVSKAEGLLERMKRAHINPTTRTFNMLMDGLCNTGQL 298
Query: 358 EGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTI 417
+ A + +LK G P ++TY LI G++KV N + E+ +M GI P++ +T +
Sbjct: 299 DKALSYLEKLKLIGLCPTLVTYNILISGFSKVGNSSVVSELVREMEDRGISPSKVTYTIL 358
Query: 418 MDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANEL 468
M+ + ++ D + A + M+ G PDQ +L+ EA++L
Sbjct: 359 MNTFVRSDDIEKAYEMFHLMKRIGLVPDQHTYGVLIHGLCIKGNMVEASKL 409
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 76/329 (23%), Positives = 154/329 (46%), Gaps = 6/329 (1%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N+ + ++I + K+G ++ M G P++ ++ +L+ Y R G+ A +F
Sbjct: 176 NQYIYTIMINGFFKKGYKKDGFELYQKMKLVGVLPNLYTYNSLITEYCRDGKLSLAFKVF 235
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
+ G +A+TY I++ + +AE + + +++ + P + F+M++
Sbjct: 236 DEISKRGVACNAVTYNILIGGLCRKGQVSKAEGLLERM---KRAHINPTTRTFNMLMDGL 292
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFET---NYKEVSKIYDQMQRAGLQPDV 271
G +KA + G+ + VTYN L+S + N VS++ +M+ G+ P
Sbjct: 293 CNTGQLDKALSYLEKLKLIGLCPTLVTYNILISGFSKVGNSSVVSELVREMEDRGISPSK 352
Query: 272 VSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKC 331
V+Y +L+N + ++ E+A +F M G+ P Y +L+ I G + +A ++K
Sbjct: 353 VTYTILMNTFVRSDDIEKAYEMFHLMKRIGLVPDQHTYGVLIHGLCIKGNMVEASKLYKS 412
Query: 332 MRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNN 391
M P+ Y TM++ Y + A KF + ++G PNV +Y + I+ K
Sbjct: 413 MVEMHLQPNDVIYNTMINGYCKECNSYKALKFLEEMVKNGVTPNVASYISTIQILCKDGK 472
Query: 392 LEKMMEIYDKMRVNGIKPNQTIFTTIMDA 420
+ + +M G+KP +++ + + A
Sbjct: 473 SIEAKRLLKEMTEAGLKPPESLCSKVGQA 501
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/233 (21%), Positives = 93/233 (39%), Gaps = 5/233 (2%)
Query: 259 YDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYN--ILLDAF 316
+ M G P S+ ++ K+ + F E L R Y+ I + AF
Sbjct: 61 FKLMVLKGHSPSSFSFNNALDLLAKSGNLDRTWGFFTEYLG---RTQFDVYSFWITIKAF 117
Query: 317 AISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNV 376
+G V + + M SP++ YT ++ A D++ A+ F R+ G N
Sbjct: 118 CENGNVSKGFELLAQMETMGVSPNVFIYTILIEACCRNGDIDQAKVMFSRMDDLGLAANQ 177
Query: 377 ITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKE 436
Y +I G+ K + E+Y KM++ G+ PN + +++ Y ++ A + E
Sbjct: 178 YIYTIMINGFFKKGYKKDGFELYQKMKLVGVLPNLYTYNSLITEYCRDGKLSLAFKVFDE 237
Query: 437 MESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGINGLSISVD 489
+ G + NIL+ + ++A LL + P ++ +D
Sbjct: 238 ISKRGVACNAVTYNILIGGLCRKGQVSKAEGLLERMKRAHINPTTRTFNMLMD 290
>gi|15983487|gb|AAL11611.1|AF424618_1 AT5g04810/MUK11_13 [Arabidopsis thaliana]
Length = 950
Score = 147 bits (371), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 100/387 (25%), Positives = 177/387 (45%), Gaps = 43/387 (11%)
Query: 98 DFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRM 157
+F +++ YG++GD ++A + M +G P+ +T+L+ AY G A + R+M
Sbjct: 309 EFGLMVKFYGRRGDMHRARETFERMRARGITPTSRIYTSLIHAYAVGRDMDEALSCVRKM 368
Query: 158 QSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKP-DQKMFHMMIYMYKK 216
+ G S +TY +I+ F +A + A+ F DE K K + ++ +IY + +
Sbjct: 369 KEEGIEMSLVTYSVIVGGFSKAGHAEAADYWF----DEAKRIHKTLNASIYGKIIYAHCQ 424
Query: 217 AGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSK---IYDQMQRAGLQPDVVS 273
E+A L M E G+ Y+++M T + K ++ +++ G P VV+
Sbjct: 425 TCNMERAEALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVFKRLKECGFTPTVVT 484
Query: 274 YALLINAYGKARREEEAL-----------------------------------AVFEEML 298
Y LIN Y K + +AL AVFE+M+
Sbjct: 485 YGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMV 544
Query: 299 DAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDME 358
G++P YN ++ AF G +D+A K M++ R P ++ ++ Y + DM
Sbjct: 545 KEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGDMR 604
Query: 359 GAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIM 418
+ + F +++ G VP V T+ LI G + +EK +EI D+M + G+ N+ +T IM
Sbjct: 605 RSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKIM 664
Query: 419 DAYGKNKDFDSAVVWYKEMESCGFPPD 445
Y D A ++ +++ G D
Sbjct: 665 QGYASVGDTGKAFEYFTRLQNEGLDVD 691
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 104/387 (26%), Positives = 182/387 (47%), Gaps = 10/387 (2%)
Query: 59 PKDLVLGTLVRLKQLKKWNVVSEVLEWLRI--QSWWDFNEMDFLMLITAYGKQGDFNKAE 116
P + G L+ L K +S+ LE R+ + N + M+I + K D+ A
Sbjct: 480 PTVVTYGCLINL--YTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAF 537
Query: 117 KVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLF 176
V M K+G P V+ + ++ A+ G A + MQ RP+ T+ I+ +
Sbjct: 538 AVFEDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGY 597
Query: 177 VEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQ 236
++ + + EVF + + P F+ +I + EKA ++ M GV
Sbjct: 598 AKSGDMRRSLEVFDMM---RRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVS 654
Query: 237 QSTVTYNSLMSFETNYKEVSKIYD---QMQRAGLQPDVVSYALLINAYGKARREEEALAV 293
+ TY +M + + K ++ ++Q GL D+ +Y L+ A K+ R + ALAV
Sbjct: 655 ANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSALAV 714
Query: 294 FEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVN 353
+EM + YNIL+D +A G V +A + + M+++ PDI +YT+ +SA
Sbjct: 715 TKEMSARNIPRNSFVYNILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTSFISACSK 774
Query: 354 ASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTI 413
A DM A + ++ G PN+ TY TLIKG+A+ + EK + Y++M+ GIKP++ +
Sbjct: 775 AGDMNRATQTIEEMEALGVKPNIKTYTTLIKGWARASLPEKALSCYEEMKAMGIKPDKAV 834
Query: 414 FTTIMDAYGKNKDFDSAVVWYKEMESC 440
+ ++ + A ++ M C
Sbjct: 835 YHCLLTSLLSRASIAEAYIYSGVMTIC 861
Score = 88.6 bits (218), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 51/218 (23%), Positives = 101/218 (46%), Gaps = 4/218 (1%)
Query: 251 NYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYN 310
N++ V ++++ + P + L++ YG+ A FE M G+ PT + Y
Sbjct: 291 NWQAVISAFEKISK----PSRTEFGLMVKFYGRRGDMHRARETFERMRARGITPTSRIYT 346
Query: 311 ILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQD 370
L+ A+A+ +D+A + + M+ + + +Y+ ++ + A E A+ +F K+
Sbjct: 347 SLIHAYAVGRDMDEALSCVRKMKEEGIEMSLVTYSVIVGGFSKAGHAEAADYWFDEAKRI 406
Query: 371 GFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSA 430
N YG +I + + N+E+ + +M GI I+ T+MD Y D
Sbjct: 407 HKTLNASIYGKIIYAHCQTCNMERAEALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKG 466
Query: 431 VVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANEL 468
+V +K ++ CGF P L++L + ++A E+
Sbjct: 467 LVVFKRLKECGFTPTVVTYGCLINLYTKVGKISKALEV 504
>gi|297830178|ref|XP_002882971.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297328811|gb|EFH59230.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 642
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 106/401 (26%), Positives = 185/401 (46%), Gaps = 43/401 (10%)
Query: 128 APSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEE 187
P V+S L++A GR A ++F + + +P++ TY ++ + ++ + ++ E
Sbjct: 161 GPVVLSE--LVKALGRAKMVSKALSVFYQAKGRKCKPTSSTYNSVILMLMQEGQHEKVHE 218
Query: 188 VFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMS 247
V+ + +E PD + +I Y+K G + A +LF M + +Q + Y +L+
Sbjct: 219 VYTEMCNE--GDCFPDTITYSALISSYEKLGRNDSAIRLFDEMKDNCMQPTEKIYTTLLG 276
Query: 248 FETNYKEVSK---IYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRP 304
+V K ++++M+RAG P V +Y LI GKA R EEA +++ ML G+ P
Sbjct: 277 IYFKVGKVEKALDLFEEMKRAGCSPTVYTYTELIKGLGKAGRVEEAYDLYKNMLTDGLTP 336
Query: 305 THKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSA-YVNASDMEGAEKF 363
N L++ G +++ VF M RC+P + SY T++ A + + + + +
Sbjct: 337 DVVFLNNLMNILGKVGRLEELTNVFNEMGTWRCTPTVVSYNTVIKALFESKAPVSEVSSW 396
Query: 364 FRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGK 423
F ++K DG P+ TY LI GY K N +EK + + ++M G P + ++++A GK
Sbjct: 397 FDKMKADGVSPSEFTYSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGK 456
Query: 424 NKDFDS-----------------------------------AVVWYKEMESCGFPPDQKA 448
K +++ AV + EM++ G PD A
Sbjct: 457 AKRYEAANELFKELKENFGNVSSRVYAVMIKHFGKCGKLSEAVDLFNEMKNQGSGPDVYA 516
Query: 449 KNILLSLAKTADERNEANELLGNFNHPNNEPGINGLSISVD 489
N L+S A NEAN LL IN +I ++
Sbjct: 517 YNALMSGMVKAGMVNEANSLLRKMEENGCTADINSHNIILN 557
Score = 134 bits (338), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 95/372 (25%), Positives = 171/372 (45%), Gaps = 7/372 (1%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
LI++Y K G + A ++ M P+ +T L+ Y + G+ + A +F M+ +G
Sbjct: 239 LISSYEKLGRNDSAIRLFDEMKDNCMQPTEKIYTTLLGIYFKVGKVEKALDLFEEMKRAG 298
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
P+ TY ++K +A + +EA +++ +L + L PD + ++ + K G E
Sbjct: 299 CSPTVYTYTELIKGLGKAGRVEEAYDLYKNMLTD---GLTPDVVFLNNLMNILGKVGRLE 355
Query: 222 KARKLFALMAERGVQQSTVTYNSLMS--FETN--YKEVSKIYDQMQRAGLQPDVVSYALL 277
+ +F M + V+YN+++ FE+ EVS +D+M+ G+ P +Y++L
Sbjct: 356 ELTNVFNEMGTWRCTPTVVSYNTVIKALFESKAPVSEVSSWFDKMKADGVSPSEFTYSIL 415
Query: 278 INAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRC 337
I+ Y K R E+AL + EEM + G P AY L++A + + A +FK ++ +
Sbjct: 416 IDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGKAKRYEAANELFKELKENFG 475
Query: 338 SPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMME 397
+ Y M+ + + A F +K G P+V Y L+ G K + +
Sbjct: 476 NVSSRVYAVMIKHFGKCGKLSEAVDLFNEMKNQGSGPDVYAYNALMSGMVKAGMVNEANS 535
Query: 398 IYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAK 457
+ KM NG + I++ + + A+ ++ M+ CG PD N LL
Sbjct: 536 LLRKMEENGCTADINSHNIILNGFARTGVPRRAIEMFETMKHCGIKPDGVTYNTLLGCFA 595
Query: 458 TADERNEANELL 469
A EA L+
Sbjct: 596 HAGMFEEAARLM 607
Score = 128 bits (322), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 85/378 (22%), Positives = 175/378 (46%), Gaps = 6/378 (1%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
E + L+ Y K G KA + M + G +P+V ++T L++ G+ GR + A ++
Sbjct: 267 TEKIYTTLLGIYFKVGKVEKALDLFEEMKRAGCSPTVYTYTELIKGLGKAGRVEEAYDLY 326
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
+ M + G P + ++ + + + +E VF + +P ++ ++
Sbjct: 327 KNMLTDGLTPDVVFLNNLMNILGKVGRLEELTNVFNEMGTWRCTPTVVSYNT--VIKALF 384
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSK---IYDQMQRAGLQPDV 271
+ + F M GV S TY+ L+ V K + ++M G P
Sbjct: 385 ESKAPVSEVSSWFDKMKADGVSPSEFTYSILIDGYCKTNRVEKALLLLEEMDEKGFPPCP 444
Query: 272 VSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKC 331
+Y LINA GKA+R E A +F+E+ + + + Y +++ F G + +A +F
Sbjct: 445 AAYCSLINALGKAKRYEAANELFKELKENFGNVSSRVYAVMIKHFGKCGKLSEAVDLFNE 504
Query: 332 MRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNN 391
M+ PD+ +Y ++S V A + A R+++++G ++ ++ ++ G+A+
Sbjct: 505 MKNQGSGPDVYAYNALMSGMVKAGMVNEANSLLRKMEENGCTADINSHNIILNGFARTGV 564
Query: 392 LEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKA-KN 450
+ +E+++ M+ GIKP+ + T++ + F+ A +EM+ GF D +
Sbjct: 565 PRRAIEMFETMKHCGIKPDGVTYNTLLGCFAHAGMFEEAARLMREMKDKGFEYDAITYSS 624
Query: 451 ILLSLAKTADERNEANEL 468
IL ++ E+++ + L
Sbjct: 625 ILDAVGNMDHEKDDVSSL 642
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 84/342 (24%), Positives = 155/342 (45%), Gaps = 42/342 (12%)
Query: 168 TYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLF 227
TY +++ EA + E ++ + P + ++ +A KA +F
Sbjct: 128 TYMALIRCLEEARLYGEMYRTIQEVVRNTYVSVGP--VVLSELVKALGRAKMVSKALSVF 185
Query: 228 ALMAERGVQQSTVTYNSLMSF---ETNYKEVSKIYDQMQRAG-LQPDVVSYALLINAYGK 283
R + ++ TYNS++ E +++V ++Y +M G PD ++Y+ LI++Y K
Sbjct: 186 YQAKGRKCKPTSSTYNSVILMLMQEGQHEKVHEVYTEMCNEGDCFPDTITYSALISSYEK 245
Query: 284 ARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICS 343
R + A+ +F+EM D ++PT K Y LL + G V++A +F+ M+R CSP + +
Sbjct: 246 LGRNDSAIRLFDEMKDNCMQPTEKIYTTLLGIYFKVGKVEKALDLFEEMKRAGCSPTVYT 305
Query: 344 YTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEI----- 398
YT ++ A +E A ++ + DG P+V+ L+ KV LE++ +
Sbjct: 306 YTELIKGLGKAGRVEEAYDLYKNMLTDGLTPDVVFLNNLMNILGKVGRLEELTNVFNEMG 365
Query: 399 -------------------------------YDKMRVNGIKPNQTIFTTIMDAYGKNKDF 427
+DKM+ +G+ P++ ++ ++D Y K
Sbjct: 366 TWRCTPTVVSYNTVIKALFESKAPVSEVSSWFDKMKADGVSPSEFTYSILIDGYCKTNRV 425
Query: 428 DSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELL 469
+ A++ +EM+ GFPP A L++ A ANEL
Sbjct: 426 EKALLLLEEMDEKGFPPCPAAYCSLINALGKAKRYEAANELF 467
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 65/274 (23%), Positives = 124/274 (45%), Gaps = 43/274 (15%)
Query: 88 IQSWWDF--------NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALME 139
+ SW+D +E + +LI Y K KA +L M++KG+ P ++ +L+
Sbjct: 393 VSSWFDKMKADGVSPSEFTYSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLIN 452
Query: 140 AYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSP 199
A G+ RY+ A +F+ ++ + S+ Y +++K F + K EA ++F + ++
Sbjct: 453 ALGKAKRYEAANELFKELKENFGNVSSRVYAVMIKHFGKCGKLSEAVDLFNEMKNQGSG- 511
Query: 200 LKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSKIY 259
PD ++ ++ KAG +A NSL+
Sbjct: 512 --PDVYAYNALMSGMVKAGMVNEA-------------------NSLLR------------ 538
Query: 260 DQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAIS 319
+M+ G D+ S+ +++N + + A+ +FE M G++P YN LL FA +
Sbjct: 539 -KMEENGCTADINSHNIILNGFARTGVPRRAIEMFETMKHCGIKPDGVTYNTLLGCFAHA 597
Query: 320 GMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVN 353
GM ++A + + M+ D +Y+++L A N
Sbjct: 598 GMFEEAARLMREMKDKGFEYDAITYSSILDAVGN 631
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 65/252 (25%), Positives = 112/252 (44%), Gaps = 23/252 (9%)
Query: 233 RGVQQSTVTYNSLMSFETNYKEVSKIYDQMQR----------AGLQPDVVSYALLINAYG 282
R Q TY +L+ E +++Y +M R + P V+S L+ A G
Sbjct: 120 RNFQHDCSTYMALI----RCLEEARLYGEMYRTIQEVVRNTYVSVGPVVLSE--LVKALG 173
Query: 283 KARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFK--CMRRDRCSPD 340
+A+ +AL+VF + +PT YN ++ G ++ V+ C D C PD
Sbjct: 174 RAKMVSKALSVFYQAKGRKCKPTSSTYNSVILMLMQEGQHEKVHEVYTEMCNEGD-CFPD 232
Query: 341 ICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYD 400
+Y+ ++S+Y + A + F +K + P Y TL+ Y KV +EK +++++
Sbjct: 233 TITYSALISSYEKLGRNDSAIRLFDEMKDNCMQPTEKIYTTLLGIYFKVGKVEKALDLFE 292
Query: 401 KMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPD----QKAKNILLSLA 456
+M+ G P +T ++ GK + A YK M + G PD NIL +
Sbjct: 293 EMKRAGCSPTVYTYTELIKGLGKAGRVEEAYDLYKNMLTDGLTPDVVFLNNLMNILGKVG 352
Query: 457 KTADERNEANEL 468
+ + N NE+
Sbjct: 353 RLEELTNVFNEM 364
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 95/211 (45%), Gaps = 2/211 (0%)
Query: 263 QRAGLQPDVVSYALLINAYGKARREEEALAVFEEML-DAGVRPTHKAYNILLDAFAISGM 321
+R Q D +Y LI +AR E +E++ + V + L+ A + M
Sbjct: 118 KRRNFQHDCSTYMALIRCLEEARLYGEMYRTIQEVVRNTYVSVGPVVLSELVKALGRAKM 177
Query: 322 VDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDG-FVPNVITYG 380
V +A +VF + +C P +Y +++ + E + + + +G P+ ITY
Sbjct: 178 VSKALSVFYQAKGRKCKPTSSTYNSVILMLMQEGQHEKVHEVYTEMCNEGDCFPDTITYS 237
Query: 381 TLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESC 440
LI Y K+ + + ++D+M+ N ++P + I+TT++ Y K + A+ ++EM+
Sbjct: 238 ALISSYEKLGRNDSAIRLFDEMKDNCMQPTEKIYTTLLGIYFKVGKVEKALDLFEEMKRA 297
Query: 441 GFPPDQKAKNILLSLAKTADERNEANELLGN 471
G P L+ A EA +L N
Sbjct: 298 GCSPTVYTYTELIKGLGKAGRVEEAYDLYKN 328
>gi|125539937|gb|EAY86332.1| hypothetical protein OsI_07707 [Oryza sativa Indica Group]
Length = 584
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 91/355 (25%), Positives = 170/355 (47%), Gaps = 6/355 (1%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
LI +G A VL M ++ P VV++T L+EA + YK A + M+ G
Sbjct: 166 LIRGLCGRGRTANALAVLDEMLRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKG 225
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
P +TY +++ + + +A E L +P+ +++++ A +E
Sbjct: 226 CTPDIVTYNVVVNGICQEGRVDDAIEFLKNL---PSYGCEPNTVSYNIVLKGLCTAERWE 282
Query: 222 KARKLFALMAERGVQQSTVTYNSLMSFETNYKEVS---KIYDQMQRAGLQPDVVSYALLI 278
A +L M ++G + VT+N L+SF V ++ +Q+ + G P+ +SY L+
Sbjct: 283 DAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCSPNSLSYNPLL 342
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCS 338
+A+ K ++ ++A+A + M+ G P +YN LL A SG VD A + ++ C+
Sbjct: 343 HAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCA 402
Query: 339 PDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEI 398
P + SY T++ A + A + + G P++ITY T+ G + + +E +
Sbjct: 403 PVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRA 462
Query: 399 YDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILL 453
+ K++ GI+PN ++ I+ K ++ SA+ + M G P++ IL+
Sbjct: 463 FGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTILI 517
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 89/360 (24%), Positives = 175/360 (48%), Gaps = 10/360 (2%)
Query: 66 TLVR--LKQLKKWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMN 123
TL+R + + N ++ + E LR + D + + +L+ A K+ + +A K+L M
Sbjct: 165 TLIRGLCGRGRTANALAVLDEMLRRRCVPDV--VTYTILLEATCKRSGYKQAMKLLDEMR 222
Query: 124 KKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFK 183
KG P +V++ ++ + GR +A + + S G P+ ++Y I+LK A +++
Sbjct: 223 DKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWE 282
Query: 184 EAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYN 243
+AEE M + ++ P P+ F+M+I + G E A ++ + + G ++++YN
Sbjct: 283 DAEE-LMGEMGQKGCP--PNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCSPNSLSYN 339
Query: 244 SLMSFETNYKEVSK---IYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDA 300
L+ K++ K D M G PD+VSY L+ A ++ + A+ + ++ D
Sbjct: 340 PLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDK 399
Query: 301 GVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGA 360
G P +YN ++D +G +A + M PDI +Y+T+ + +E A
Sbjct: 400 GCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDA 459
Query: 361 EKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDA 420
+ F +++ G PN + Y +I G K ++++ M NG PN++ +T +++
Sbjct: 460 IRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTILIEG 519
Score = 128 bits (321), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 90/337 (26%), Positives = 148/337 (43%), Gaps = 14/337 (4%)
Query: 156 RMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYK 215
R+ S RP A T ++K + + EA V + PD ++ M+ Y
Sbjct: 88 RLVGSARRPDAGTCAALIKKLSASGRTAEARRVL--------AACGPDVMAYNAMMAGYC 139
Query: 216 KAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSK---IYDQMQRAGLQPDVV 272
AG + AR+ AER V++ T ++L+ + + D+M R PDVV
Sbjct: 140 GAGQVDAARRW---CAERAVERDAYTCDTLIRGLCGRGRTANALAVLDEMLRRRCVPDVV 196
Query: 273 SYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCM 332
+Y +L+ A K ++A+ + +EM D G P YN++++ G VD A K +
Sbjct: 197 TYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNL 256
Query: 333 RRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNL 392
C P+ SY +L A E AE+ + Q G PNV+T+ LI + +
Sbjct: 257 PSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLV 316
Query: 393 EKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNIL 452
E +E+ +++ G PN + ++ A+ K K D A+ + M S G PD + N L
Sbjct: 317 EPALEVLEQIPKYGCSPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTL 376
Query: 453 LSLAKTADERNEANELLGNFNHPNNEPGINGLSISVD 489
L+ + E + A ELL P + + +D
Sbjct: 377 LTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVID 413
Score = 85.5 bits (210), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 70/297 (23%), Positives = 124/297 (41%), Gaps = 47/297 (15%)
Query: 81 EVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEA 140
EVLE + + N + + L+ A+ KQ +KA L M +G P +VS+ L+ A
Sbjct: 321 EVLEQIP-KYGCSPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTA 379
Query: 141 YGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPL 200
R G A + +++ G P ++Y ++ +A K KEA E LL+E
Sbjct: 380 LCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALE----LLNE----- 430
Query: 201 KPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSL---MSFETNYKEVSK 257
M +G+Q +TY+++ + E ++ +
Sbjct: 431 -----------------------------MVSKGLQPDIITYSTIAAGLCREDRIEDAIR 461
Query: 258 IYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFA 317
+ ++Q G++P+ V Y +I K R A+ +F M+ G P Y IL++ A
Sbjct: 462 AFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTILIEGLA 521
Query: 318 ISGMVDQARTVFK--CMRRDRCSPDICSY-TTMLSAYVNASDMEGAEKFFRRLKQDG 371
G++ +AR + C R + D+ L+ ++ S+ G F RL +G
Sbjct: 522 YEGLIKEARDLLDELCSRGEEILLDVHLIDVAFLTTFLPCSNANGGP--FLRLPPEG 576
>gi|357140125|ref|XP_003571621.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19440,
chloroplastic-like [Brachypodium distachyon]
Length = 814
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 89/322 (27%), Positives = 157/322 (48%), Gaps = 8/322 (2%)
Query: 122 MNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANK 181
M +KG ++ + AL+ G K A + R M + G +TY I+++ + +K
Sbjct: 468 MLEKGLCINIATSNALIHGLCEGKNMKGATEVLRTMVNKGMELDNITYNIMIQGCCKDSK 527
Query: 182 FKEAEEVFMTLLDEE-KSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTV 240
+EA + L D+ + KPD MF+ +I+ Y G E+A L M GVQ V
Sbjct: 528 IEEA----LKLRDDMIRKGFKPDAYMFNSIIHAYCDLGKMEEALHLLGQMKIEGVQPDVV 583
Query: 241 TYNSLMSFETNYKEVSKI---YDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEM 297
+Y +++ K++ K +++ GL+P+ V Y LI YG+ A+ V + M
Sbjct: 584 SYGTIIDGYCKAKDIQKANEYLNELMACGLKPNAVIYNALIGGYGRNGNISGAIGVLDTM 643
Query: 298 LDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDM 357
G++PT+ Y L+ +G+VD+A+T+F+ R++ + YT M+ M
Sbjct: 644 ESIGIQPTNVTYCSLMHWMCHAGLVDEAKTMFEQSRKNSIEVGVVGYTIMIQGLCKIGKM 703
Query: 358 EGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTI 417
+ A +F ++ PN ITY TL+ Y K N E+ +++D+M +GI P+ + T+
Sbjct: 704 DEAMNYFEEMRSRSIPPNKITYTTLMYAYCKSGNNEEASKLFDEMVSSGIVPDNVSYNTL 763
Query: 418 MDAYGKNKDFDSAVVWYKEMES 439
+ + + D A+ E+ S
Sbjct: 764 VTGFSQVDSLDKAIEKAAEISS 785
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 93/363 (25%), Positives = 175/363 (48%), Gaps = 6/363 (1%)
Query: 108 KQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSAL 167
+ G +++S M K+G P+ TA + +G R++ A I+ +M G +
Sbjct: 419 RTGRLESVVRLISEMVKRGMKPNDALMTACTKQLCQGRRHQEAVGIWLKMLEKGLCINIA 478
Query: 168 TYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLF 227
T ++ E K A EV T++++ ++ D +++MI K E+A KL
Sbjct: 479 TSNALIHGLCEGKNMKGATEVLRTMVNKG---MELDNITYNIMIQGCCKDSKIEEALKLR 535
Query: 228 ALMAERGVQQSTVTYNSLMSFETNY---KEVSKIYDQMQRAGLQPDVVSYALLINAYGKA 284
M +G + +NS++ + +E + QM+ G+QPDVVSY +I+ Y KA
Sbjct: 536 DDMIRKGFKPDAYMFNSIIHAYCDLGKMEEALHLLGQMKIEGVQPDVVSYGTIIDGYCKA 595
Query: 285 RREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSY 344
+ ++A E++ G++P YN L+ + +G + A V M P +Y
Sbjct: 596 KDIQKANEYLNELMACGLKPNAVIYNALIGGYGRNGNISGAIGVLDTMESIGIQPTNVTY 655
Query: 345 TTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRV 404
+++ +A ++ A+ F + +++ V+ Y +I+G K+ +++ M +++MR
Sbjct: 656 CSLMHWMCHAGLVDEAKTMFEQSRKNSIEVGVVGYTIMIQGLCKIGKMDEAMNYFEEMRS 715
Query: 405 NGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNE 464
I PN+ +TT+M AY K+ + + A + EM S G PD + N L++ D ++
Sbjct: 716 RSIPPNKITYTTLMYAYCKSGNNEEASKLFDEMVSSGIVPDNVSYNTLVTGFSQVDSLDK 775
Query: 465 ANE 467
A E
Sbjct: 776 AIE 778
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 74/306 (24%), Positives = 145/306 (47%), Gaps = 11/306 (3%)
Query: 80 SEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALME 139
+EVL + + + + + + ++I K +A K+ M +KG+ P +++
Sbjct: 497 TEVLRTM-VNKGMELDNITYNIMIQGCCKDSKIEEALKLRDDMIRKGFKPDAYMFNSIIH 555
Query: 140 AYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSP 199
AY G+ + A + +M+ G +P ++Y I+ + +A ++A E L+
Sbjct: 556 AYCDLGKMEEALHLLGQMKIEGVQPDVVSYGTIIDGYCKAKDIQKANEYLNELM---ACG 612
Query: 200 LKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETN---YKEVS 256
LKP+ +++ +I Y + G A + M G+Q + VTY SLM + + E
Sbjct: 613 LKPNAVIYNALIGGYGRNGNISGAIGVLDTMESIGIQPTNVTYCSLMHWMCHAGLVDEAK 672
Query: 257 KIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAF 316
+++Q ++ ++ VV Y ++I K + +EA+ FEEM + P Y L+ A+
Sbjct: 673 TMFEQSRKNSIEVGVVGYTIMIQGLCKIGKMDEAMNYFEEMRSRSIPPNKITYTTLMYAY 732
Query: 317 AISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAY--VNASD--MEGAEKFFRRLKQDGF 372
SG ++A +F M PD SY T+++ + V++ D +E A + + Q+
Sbjct: 733 CKSGNNEEASKLFDEMVSSGIVPDNVSYNTLVTGFSQVDSLDKAIEKAAEISSIMTQNDC 792
Query: 373 VPNVIT 378
+ NV+
Sbjct: 793 LDNVLV 798
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 95/432 (21%), Positives = 183/432 (42%), Gaps = 12/432 (2%)
Query: 44 AVAVLRSERTRGQPLPKDLVLGTLVRLKQLKKWNVVSEVLEWLRIQSWWDFNEMDFLMLI 103
A VL S R + +L L R L +V + +R N + +I
Sbjct: 180 AFHVLSSRRASPSVKTCNALLEALARTGNL---GATCKVFDEMRDCKTVTPNGYSYTSMI 236
Query: 104 TAYGKQGDFNKAEKVLSFMNKKGYAPSV--VSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
A K G + K+LS + G S V + LM+A + GR A + RM+ S
Sbjct: 237 KALCKVGKVDDGFKILSDLIHAGLQQSAGAVPYNLLMDALCKSGRVDEAIRLKGRMEESR 296
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
PS +T+ I++ +++F E V L + E + P++ + + +I + + G +
Sbjct: 297 VAPSMVTFGILINGLKRSDRFGE---VGALLREMEGLGITPNEVICNELIDWHCRKGHFT 353
Query: 222 KARKLFALMAERGVQQSTVTYNSL---MSFETNYKEVSKIYDQMQRAGLQPDVVSY-ALL 277
+A +LF M + ++ + VTYN + + E + +I ++M G+ + +++
Sbjct: 354 EAIRLFDEMVSKEMKSTAVTYNLIARALCKEGEMERAERILEEMLSTGMTIHSGLFNSVV 413
Query: 278 INAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRC 337
+ R E + + EM+ G++P +A ++ M
Sbjct: 414 AGLLQRTGRLESVVRLISEMVKRGMKPNDALMTACTKQLCQGRRHQEAVGIWLKMLEKGL 473
Query: 338 SPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMME 397
+I + ++ +M+GA + R + G + ITY +I+G K + +E+ ++
Sbjct: 474 CINIATSNALIHGLCEGKNMKGATEVLRTMVNKGMELDNITYNIMIQGCCKDSKIEEALK 533
Query: 398 IYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAK 457
+ D M G KP+ +F +I+ AY + A+ +M+ G PD + ++
Sbjct: 534 LRDDMIRKGFKPDAYMFNSIIHAYCDLGKMEEALHLLGQMKIEGVQPDVVSYGTIIDGYC 593
Query: 458 TADERNEANELL 469
A + +ANE L
Sbjct: 594 KAKDIQKANEYL 605
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 77/395 (19%), Positives = 161/395 (40%), Gaps = 10/395 (2%)
Query: 102 LITAYGKQGDFNKAEKVLSFM-NKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSS 160
L+ A + G+ KV M + K P+ S+T++++A + G+ + I + +
Sbjct: 199 LLEALARTGNLGATCKVFDEMRDCKTVTPNGYSYTSMIKALCKVGKVDDGFKILSDLIHA 258
Query: 161 GPRPSA--LTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAG 218
G + SA + Y +++ ++ + EA + + E+S + P F ++I K++
Sbjct: 259 GLQQSAGAVPYNLLMDALCKSGRVDEAIRLKGRM---EESRVAPSMVTFGILINGLKRSD 315
Query: 219 GYEKARKLFALMAERGVQQSTVTYNSLMSFET---NYKEVSKIYDQMQRAGLQPDVVSYA 275
+ + L M G+ + V N L+ + ++ E +++D+M ++ V+Y
Sbjct: 316 RFGEVGALLREMEGLGITPNEVICNELIDWHCRKGHFTEAIRLFDEMVSKEMKSTAVTYN 375
Query: 276 LLINAYGKARREEEALAVFEEMLDAGVRPTHKAYN-ILLDAFAISGMVDQARTVFKCMRR 334
L+ A K E A + EEML G+ +N ++ +G ++ + M +
Sbjct: 376 LIARALCKEGEMERAERILEEMLSTGMTIHSGLFNSVVAGLLQRTGRLESVVRLISEMVK 435
Query: 335 DRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEK 394
P+ T + A + ++ + G N+ T LI G + N++
Sbjct: 436 RGMKPNDALMTACTKQLCQGRRHQEAVGIWLKMLEKGLCINIATSNALIHGLCEGKNMKG 495
Query: 395 MMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLS 454
E+ M G++ + + ++ K+ + A+ +M GF PD N ++
Sbjct: 496 ATEVLRTMVNKGMELDNITYNIMIQGCCKDSKIEEALKLRDDMIRKGFKPDAYMFNSIIH 555
Query: 455 LAKTADERNEANELLGNFNHPNNEPGINGLSISVD 489
+ EA LLG +P + +D
Sbjct: 556 AYCDLGKMEEALHLLGQMKIEGVQPDVVSYGTIID 590
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 70/337 (20%), Positives = 126/337 (37%), Gaps = 44/337 (13%)
Query: 109 QGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALT 168
+G A ++ + +PSV + AL+EA R G +F M+
Sbjct: 171 RGSLRLAVDAFHVLSSRRASPSVKTCNALLEALARTGNLGATCKVFDEMR---------- 220
Query: 169 YQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFA 228
+ + P+ + MI K G + K+ +
Sbjct: 221 ---------------------------DCKTVTPNGYSYTSMIKALCKVGKVDDGFKILS 253
Query: 229 LMAERGVQQS--TVTYNSLM---SFETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGK 283
+ G+QQS V YN LM E ++ +M+ + + P +V++ +LIN +
Sbjct: 254 DLIHAGLQQSAGAVPYNLLMDALCKSGRVDEAIRLKGRMEESRVAPSMVTFGILINGLKR 313
Query: 284 ARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICS 343
+ R E A+ EM G+ P N L+D G +A +F M +
Sbjct: 314 SDRFGEVGALLREMEGLGITPNEVICNELIDWHCRKGHFTEAIRLFDEMVSKEMKSTAVT 373
Query: 344 YTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYA-KVNNLEKMMEIYDKM 402
Y + A +ME AE+ + G + + +++ G + LE ++ + +M
Sbjct: 374 YNLIARALCKEGEMERAERILEEMLSTGMTIHSGLFNSVVAGLLQRTGRLESVVRLISEM 433
Query: 403 RVNGIKPNQTIFTTIMDAYGKNKDFDSAV-VWYKEME 438
G+KPN + T + + AV +W K +E
Sbjct: 434 VKRGMKPNDALMTACTKQLCQGRRHQEAVGIWLKMLE 470
>gi|42567647|ref|NP_568141.2| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
thaliana]
gi|122223689|sp|Q0WMY5.1|PP365_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g04810, chloroplastic; AltName: Full=Maize PPR4
homolog; Short=AtPPR4; Flags: Precursor
gi|110739199|dbj|BAF01515.1| membrane-associated salt-inducible protein-like [Arabidopsis
thaliana]
gi|332003406|gb|AED90789.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
thaliana]
Length = 952
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 100/387 (25%), Positives = 177/387 (45%), Gaps = 43/387 (11%)
Query: 98 DFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRM 157
+F +++ YG++GD ++A + M +G P+ +T+L+ AY G A + R+M
Sbjct: 311 EFGLMVKFYGRRGDMHRARETFERMRARGITPTSRIYTSLIHAYAVGRDMDEALSCVRKM 370
Query: 158 QSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKP-DQKMFHMMIYMYKK 216
+ G S +TY +I+ F +A + A+ F DE K K + ++ +IY + +
Sbjct: 371 KEEGIEMSLVTYSVIVGGFSKAGHAEAADYWF----DEAKRIHKTLNASIYGKIIYAHCQ 426
Query: 217 AGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSK---IYDQMQRAGLQPDVVS 273
E+A L M E G+ Y+++M T + K ++ +++ G P VV+
Sbjct: 427 TCNMERAEALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVFKRLKECGFTPTVVT 486
Query: 274 YALLINAYGKARREEEAL-----------------------------------AVFEEML 298
Y LIN Y K + +AL AVFE+M+
Sbjct: 487 YGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMV 546
Query: 299 DAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDME 358
G++P YN ++ AF G +D+A K M++ R P ++ ++ Y + DM
Sbjct: 547 KEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGDMR 606
Query: 359 GAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIM 418
+ + F +++ G VP V T+ LI G + +EK +EI D+M + G+ N+ +T IM
Sbjct: 607 RSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKIM 666
Query: 419 DAYGKNKDFDSAVVWYKEMESCGFPPD 445
Y D A ++ +++ G D
Sbjct: 667 QGYASVGDTGKAFEYFTRLQNEGLDVD 693
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 104/387 (26%), Positives = 182/387 (47%), Gaps = 10/387 (2%)
Query: 59 PKDLVLGTLVRLKQLKKWNVVSEVLEWLRI--QSWWDFNEMDFLMLITAYGKQGDFNKAE 116
P + G L+ L K +S+ LE R+ + N + M+I + K D+ A
Sbjct: 482 PTVVTYGCLINL--YTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAF 539
Query: 117 KVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLF 176
V M K+G P V+ + ++ A+ G A + MQ RP+ T+ I+ +
Sbjct: 540 AVFEDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGY 599
Query: 177 VEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQ 236
++ + + EVF + + P F+ +I + EKA ++ M GV
Sbjct: 600 AKSGDMRRSLEVFDMM---RRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVS 656
Query: 237 QSTVTYNSLMSFETNYKEVSKIYD---QMQRAGLQPDVVSYALLINAYGKARREEEALAV 293
+ TY +M + + K ++ ++Q GL D+ +Y L+ A K+ R + ALAV
Sbjct: 657 ANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSALAV 716
Query: 294 FEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVN 353
+EM + YNIL+D +A G V +A + + M+++ PDI +YT+ +SA
Sbjct: 717 TKEMSARNIPRNSFVYNILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTSFISACSK 776
Query: 354 ASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTI 413
A DM A + ++ G PN+ TY TLIKG+A+ + EK + Y++M+ GIKP++ +
Sbjct: 777 AGDMNRATQTIEEMEALGVKPNIKTYTTLIKGWARASLPEKALSCYEEMKAMGIKPDKAV 836
Query: 414 FTTIMDAYGKNKDFDSAVVWYKEMESC 440
+ ++ + A ++ M C
Sbjct: 837 YHCLLTSLLSRASIAEAYIYSGVMTIC 863
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 51/218 (23%), Positives = 101/218 (46%), Gaps = 4/218 (1%)
Query: 251 NYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYN 310
N++ V ++++ + P + L++ YG+ A FE M G+ PT + Y
Sbjct: 293 NWQAVISAFEKISK----PSRTEFGLMVKFYGRRGDMHRARETFERMRARGITPTSRIYT 348
Query: 311 ILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQD 370
L+ A+A+ +D+A + + M+ + + +Y+ ++ + A E A+ +F K+
Sbjct: 349 SLIHAYAVGRDMDEALSCVRKMKEEGIEMSLVTYSVIVGGFSKAGHAEAADYWFDEAKRI 408
Query: 371 GFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSA 430
N YG +I + + N+E+ + +M GI I+ T+MD Y D
Sbjct: 409 HKTLNASIYGKIIYAHCQTCNMERAEALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKG 468
Query: 431 VVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANEL 468
+V +K ++ CGF P L++L + ++A E+
Sbjct: 469 LVVFKRLKECGFTPTVVTYGCLINLYTKVGKISKALEV 506
>gi|410110073|gb|AFV61116.1| pentatricopeptide repeat-containing protein 123, partial [Aloysia
virgata]
Length = 424
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 98/371 (26%), Positives = 180/371 (48%), Gaps = 37/371 (9%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
LI K D++KA + S + + G+ P +V++ A++ +G+ ++ A ++ M+++G
Sbjct: 57 LIELSRKLCDYSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMRTAG 116
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
P+ +Y +L ++VE KF EA VF + + E K L D ++MI +Y + G +
Sbjct: 117 VMPNTASYSTLLTMYVENKKFLEALSVF-SEMREIKCLL--DLTTCNIMIDVYGQLGMAK 173
Query: 222 KARKLFALMAERGVQQSTVTYNSLMSFETN---YKEVSKIYDQMQRAGLQPDVVSYALLI 278
+A KLF M + G++ + V+YN+L+ + + E ++ MQR + +VV+Y ++
Sbjct: 174 EADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIVQNVVTYNSMM 233
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCS 338
YGK E+A + +EM + G+ P Y+ ++ + G +D+A +F+ +R
Sbjct: 234 MIYGKTLEHEKANNLIQEMQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVE 293
Query: 339 PDICSYTTMLSAY-------------------------------VNASDMEGAEKFFRRL 367
D Y TM AY A +E A FR+
Sbjct: 294 IDQVLYQTMXVAYERAGLVAHAKRLLHELKSPDNIPRDTAIHILAGAGRIEEATYVFRQA 353
Query: 368 KQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDF 427
G V ++ + +I ++K ++E++DKMR G P+ + +++AYGK +F
Sbjct: 354 IDAGEVKDITVFERMIHLFSKYKKYANVIEVFDKMRGLGYFPDSNVIALVLNAYGKLHEF 413
Query: 428 DSAVVWYKEME 438
D A Y EM+
Sbjct: 414 DKANGVYMEMQ 424
Score = 125 bits (315), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 87/327 (26%), Positives = 145/327 (44%), Gaps = 39/327 (11%)
Query: 192 LLDE-EKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFE- 249
L DE + L PD+ + +I + K G ++ A M + V V Y++L+
Sbjct: 3 LFDEMRQRALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSR 62
Query: 250 --TNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHK 307
+Y + I+ +++R+G PD+V+Y +IN +GKA+ EA ++ EM AGV P
Sbjct: 63 KLCDYSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVMPNTA 122
Query: 308 AYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRL 367
+Y+ LL + + +A +VF MR +C D+ + M+ Y + A+K F +
Sbjct: 123 SYSTLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGM 182
Query: 368 KQDGFVPNVITYGTLIKGYA----------------------KVNNLEKMMEIYDK---- 401
++ G PNV++Y TL++ Y V MM IY K
Sbjct: 183 RKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIVQNVVTYNSMMMIYGKTLEH 242
Query: 402 ---------MRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNIL 452
M+ GI+PN ++TI+ +GK D A + ++++ S G DQ +
Sbjct: 243 EKANNLIQEMQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQVLYQTM 302
Query: 453 LSLAKTADERNEANELLGNFNHPNNEP 479
+ A A LL P+N P
Sbjct: 303 XVAYERAGLVAHAKRLLHELKSPDNIP 329
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 84/190 (44%)
Query: 292 AVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAY 351
+F+EM + P Y+ L+ F G+ D A + + M +DR D+ Y+ ++
Sbjct: 2 GLFDEMRQRALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELS 61
Query: 352 VNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQ 411
D A F RLK+ GF P+++ Y +I + K + + +MR G+ PN
Sbjct: 62 RKLCDYSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVMPNT 121
Query: 412 TIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGN 471
++T++ Y +NK F A+ + EM D NI++ + EA++L
Sbjct: 122 ASYSTLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWG 181
Query: 472 FNHPNNEPGI 481
EP +
Sbjct: 182 MRKMGIEPNV 191
>gi|297743291|emb|CBI36158.3| unnamed protein product [Vitis vinifera]
Length = 638
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 103/399 (25%), Positives = 187/399 (46%), Gaps = 42/399 (10%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
LI A+GK G + A + M + G P+ +T ++ Y + GR + A + + M+ G
Sbjct: 236 LIAAFGKLGRDDSAISLFDEMKENGLHPTAKIYTTILGIYFKLGRVEKALGLVQEMKEKG 295
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
+ TY ++K +A K +EA +FM +L E KPD + + +I + KAG
Sbjct: 296 CALTVYTYTELIKGVGKAGKVEEAYSIFMNMLKE---GCKPDVVLINNLINLLGKAGRLA 352
Query: 222 KARKLFALMAERGVQQSTVTYNSLMS--FETNYK--EVSKIYDQMQRAGLQPDVVSYALL 277
A KLF M + VTYN+++ FE+ + E Y++M+ G+ P +Y++L
Sbjct: 353 DAIKLFEEMESLQCTPNVVTYNTVIKALFESKARASEAFLWYEKMKENGVVPSSFTYSIL 412
Query: 278 INAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDA---------------------- 315
I+ + K R E+AL + EEM + G P AY L++A
Sbjct: 413 IDGFCKTNRVEKALLLLEEMDEKGFAPCPAAYCSLINALGKAKRYEAANELFQELRENCG 472
Query: 316 ------FAI-------SGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEK 362
+A+ G + +A +F M++ C+PD+ +Y ++S V + A
Sbjct: 473 YSSARVYAVMIKHLGKCGRLSEAVDLFNEMKKLGCNPDVYAYNALMSGMVRVGMTDEAHS 532
Query: 363 FFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYG 422
R ++++G P++ ++ ++ G+A+ + +E++ +M+ + IKP+ + T++
Sbjct: 533 LLRTMEENGCTPDLNSHNIILNGFARTGGPKGAIEMFTRMKNSKIKPDVVSYNTVLGCLS 592
Query: 423 KNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADE 461
+ F+ A KEM S GF D + +L DE
Sbjct: 593 RAGMFEEAAKLMKEMNSKGFEYDLITYSSILEAVGKIDE 631
Score = 132 bits (333), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 86/372 (23%), Positives = 178/372 (47%), Gaps = 9/372 (2%)
Query: 77 NVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTA 136
+V + +W + ++ + ++ LI + G + K + M + +
Sbjct: 105 HVKIQFFKWAGKRRNFEHDSTTYMALIHCLDEAGMLGEMWKTIQEMVRSTCVIGPADLSE 164
Query: 137 LMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEE 196
+++ G+ A +IF +++ +P++ TY ++ + ++ ++ E++ + +E
Sbjct: 165 IVKVLGKAKMVNKALSIFYQIKGRKCKPTSNTYNSMILMLMQEGHHEKVHELYNEMCNE- 223
Query: 197 KSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVS 256
PD + +I + K G + A LF M E G+ + Y +++ V
Sbjct: 224 -GDCLPDTVTYSALIAAFGKLGRDDSAISLFDEMKENGLHPTAKIYTTILGIYFKLGRVE 282
Query: 257 K---IYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILL 313
K + +M+ G V +Y LI GKA + EEA ++F ML G +P N L+
Sbjct: 283 KALGLVQEMKEKGCALTVYTYTELIKGVGKAGKVEEAYSIFMNMLKEGCKPDVVLINNLI 342
Query: 314 DAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKF--FRRLKQDG 371
+ +G + A +F+ M +C+P++ +Y T++ A S +E F + ++K++G
Sbjct: 343 NLLGKAGRLADAIKLFEEMESLQCTPNVVTYNTVIKALFE-SKARASEAFLWYEKMKENG 401
Query: 372 FVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAV 431
VP+ TY LI G+ K N +EK + + ++M G P + ++++A GK K +++A
Sbjct: 402 VVPSSFTYSILIDGFCKTNRVEKALLLLEEMDEKGFAPCPAAYCSLINALGKAKRYEAAN 461
Query: 432 VWYKEM-ESCGF 442
++E+ E+CG+
Sbjct: 462 ELFQELRENCGY 473
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 78/301 (25%), Positives = 143/301 (47%), Gaps = 42/301 (13%)
Query: 210 MIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSF---ETNYKEVSKIYDQMQRAG 266
++ + KA KA +F + R + ++ TYNS++ E ++++V ++Y++M G
Sbjct: 165 IVKVLGKAKMVNKALSIFYQIKGRKCKPTSNTYNSMILMLMQEGHHEKVHELYNEMCNEG 224
Query: 267 -LQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAF--------- 316
PD V+Y+ LI A+GK R++ A+++F+EM + G+ PT K Y +L +
Sbjct: 225 DCLPDTVTYSALIAAFGKLGRDDSAISLFDEMKENGLHPTAKIYTTILGIYFKLGRVEKA 284
Query: 317 --------------------------AISGMVDQARTVFKCMRRDRCSPDICSYTTMLSA 350
+G V++A ++F M ++ C PD+ +++
Sbjct: 285 LGLVQEMKEKGCALTVYTYTELIKGVGKAGKVEEAYSIFMNMLKEGCKPDVVLINNLINL 344
Query: 351 YVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGY--AKVNNLEKMMEIYDKMRVNGIK 408
A + A K F ++ PNV+TY T+IK +K E + Y+KM+ NG+
Sbjct: 345 LGKAGRLADAIKLFEEMESLQCTPNVVTYNTVIKALFESKARASEAFL-WYEKMKENGVV 403
Query: 409 PNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANEL 468
P+ ++ ++D + K + A++ +EM+ GF P A L++ A ANEL
Sbjct: 404 PSSFTYSILIDGFCKTNRVEKALLLLEEMDEKGFAPCPAAYCSLINALGKAKRYEAANEL 463
Query: 469 L 469
Sbjct: 464 F 464
Score = 45.4 bits (106), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 34/149 (22%), Positives = 64/149 (42%), Gaps = 1/149 (0%)
Query: 308 AYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRL 367
Y L+ +GM+ + + M R C + ++ A + A F ++
Sbjct: 126 TYMALIHCLDEAGMLGEMWKTIQEMVRSTCVIGPADLSEIVKVLGKAKMVNKALSIFYQI 185
Query: 368 KQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNG-IKPNQTIFTTIMDAYGKNKD 426
K P TY ++I + + EK+ E+Y++M G P+ ++ ++ A+GK
Sbjct: 186 KGRKCKPTSNTYNSMILMLMQEGHHEKVHELYNEMCNEGDCLPDTVTYSALIAAFGKLGR 245
Query: 427 FDSAVVWYKEMESCGFPPDQKAKNILLSL 455
DSA+ + EM+ G P K +L +
Sbjct: 246 DDSAISLFDEMKENGLHPTAKIYTTILGI 274
>gi|410110139|gb|AFV61149.1| pentatricopeptide repeat-containing protein 123, partial [Lippia
salviifolia]
Length = 378
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 98/379 (25%), Positives = 183/379 (48%), Gaps = 37/379 (9%)
Query: 111 DFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQ 170
D++KA + S + + G+ P +V++ A++ +G+ ++ A ++ M+++G P+ +Y
Sbjct: 3 DYSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMKTAGVMPNTTSYS 62
Query: 171 IILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALM 230
+L ++VE KF EA VF + + E K L D ++MI +Y + G ++A KLF M
Sbjct: 63 TLLSMYVENKKFLEALSVF-SEMREIKCLL--DLTTCNIMIDVYGQLGMAKEADKLFWGM 119
Query: 231 AERGVQQSTVTYNSLMSFETN---YKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARRE 287
+ G++ + V+YN+L+ + + E ++ MQR ++ +VV+Y ++ YGK
Sbjct: 120 RKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEH 179
Query: 288 EEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTM 347
E+A + +EM G+ P Y+ ++ + G +D+A +F+ +R D + TM
Sbjct: 180 EKANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQILFQTM 239
Query: 348 LSAY-------------------------------VNASDMEGAEKFFRRLKQDGFVPNV 376
+ AY A +E A FR+ G V ++
Sbjct: 240 IVAYERAGLVAHAKRLLHELKRPDNIPRDTAIHILAGAGRIEEATYVFRQAVDAGEVKDI 299
Query: 377 ITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKE 436
+ +I +K + E++DKMR G P+ + +++AYGK ++FD A Y E
Sbjct: 300 TVFERMIHLLSKYKKYSNVXEVFDKMRGLGYFPDSDVIAIVLNAYGKLQEFDKANDVYME 359
Query: 437 MESCGFPPDQKAKNILLSL 455
M+ G + +LSL
Sbjct: 360 MQEVGCVFSDEVHFQMLSL 378
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 73/263 (27%), Positives = 129/263 (49%), Gaps = 3/263 (1%)
Query: 220 YEKARKLFALMAERGVQQSTVTYNSLMSF---ETNYKEVSKIYDQMQRAGLQPDVVSYAL 276
Y KA +F+ + G V YN++++ ++E + +M+ AG+ P+ SY+
Sbjct: 4 YSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMKTAGVMPNTTSYST 63
Query: 277 LINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDR 336
L++ Y + ++ EAL+VF EM + NI++D + GM +A +F MR+
Sbjct: 64 LLSMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMG 123
Query: 337 CSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMM 396
P++ SY T+L Y +A A FR +++ NV+TY +++ Y K EK
Sbjct: 124 IEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKAN 183
Query: 397 EIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLA 456
+ +M+ GI+PN ++TI+ +GK D A + ++++ S G DQ ++
Sbjct: 184 NLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQILFQTMIVAY 243
Query: 457 KTADERNEANELLGNFNHPNNEP 479
+ A A LL P+N P
Sbjct: 244 ERAGLVAHAKRLLHELKRPDNIP 266
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/241 (24%), Positives = 112/241 (46%), Gaps = 37/241 (15%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + + L+ YG F +A + M +K +VV++ ++M YG+ ++ A +
Sbjct: 127 NVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLI 186
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
+ MQS G P+++TY I+ ++ + K A +F L S ++ DQ +F MI Y
Sbjct: 187 QEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKL---RSSGVEIDQILFQTMIVAY 243
Query: 215 KKAGGYEKARKLF---------------ALMAERG-VQQSTVTYNS-------------- 244
++AG A++L ++A G ++++T +
Sbjct: 244 ERAGLVAHAKRLLHELKRPDNIPRDTAIHILAGAGRIEEATYVFRQAVDAGEVKDITVFE 303
Query: 245 ----LMSFETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDA 300
L+S Y V +++D+M+ G PD A+++NAYGK + ++A V+ EM +
Sbjct: 304 RMIHLLSKYKKYSNVXEVFDKMRGLGYFPDSDVIAIVLNAYGKLQEFDKANDVYMEMQEV 363
Query: 301 G 301
G
Sbjct: 364 G 364
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 57/127 (44%)
Query: 355 SDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIF 414
D A F RLK+ GF P+++ Y +I + K + + +M+ G+ PN T +
Sbjct: 2 CDYSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMKTAGVMPNTTSY 61
Query: 415 TTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNH 474
+T++ Y +NK F A+ + EM D NI++ + EA++L
Sbjct: 62 STLLSMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRK 121
Query: 475 PNNEPGI 481
EP +
Sbjct: 122 MGIEPNV 128
>gi|225442663|ref|XP_002279821.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g16010-like [Vitis vinifera]
Length = 725
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 103/399 (25%), Positives = 187/399 (46%), Gaps = 42/399 (10%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
LI A+GK G + A + M + G P+ +T ++ Y + GR + A + + M+ G
Sbjct: 236 LIAAFGKLGRDDSAISLFDEMKENGLHPTAKIYTTILGIYFKLGRVEKALGLVQEMKEKG 295
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
+ TY ++K +A K +EA +FM +L E KPD + + +I + KAG
Sbjct: 296 CALTVYTYTELIKGVGKAGKVEEAYSIFMNMLKE---GCKPDVVLINNLINLLGKAGRLA 352
Query: 222 KARKLFALMAERGVQQSTVTYNSLMS--FETNYK--EVSKIYDQMQRAGLQPDVVSYALL 277
A KLF M + VTYN+++ FE+ + E Y++M+ G+ P +Y++L
Sbjct: 353 DAIKLFEEMESLQCTPNVVTYNTVIKALFESKARASEAFLWYEKMKENGVVPSSFTYSIL 412
Query: 278 INAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDA---------------------- 315
I+ + K R E+AL + EEM + G P AY L++A
Sbjct: 413 IDGFCKTNRVEKALLLLEEMDEKGFAPCPAAYCSLINALGKAKRYEAANELFQELRENCG 472
Query: 316 ------FAI-------SGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEK 362
+A+ G + +A +F M++ C+PD+ +Y ++S V + A
Sbjct: 473 YSSARVYAVMIKHLGKCGRLSEAVDLFNEMKKLGCNPDVYAYNALMSGMVRVGMTDEAHS 532
Query: 363 FFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYG 422
R ++++G P++ ++ ++ G+A+ + +E++ +M+ + IKP+ + T++
Sbjct: 533 LLRTMEENGCTPDLNSHNIILNGFARTGGPKGAIEMFTRMKNSKIKPDVVSYNTVLGCLS 592
Query: 423 KNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADE 461
+ F+ A KEM S GF D + +L DE
Sbjct: 593 RAGMFEEAAKLMKEMNSKGFEYDLITYSSILEAVGKIDE 631
Score = 132 bits (333), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 86/372 (23%), Positives = 178/372 (47%), Gaps = 9/372 (2%)
Query: 77 NVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTA 136
+V + +W + ++ + ++ LI + G + K + M + +
Sbjct: 105 HVKIQFFKWAGKRRNFEHDSTTYMALIHCLDEAGMLGEMWKTIQEMVRSTCVIGPADLSE 164
Query: 137 LMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEE 196
+++ G+ A +IF +++ +P++ TY ++ + ++ ++ E++ + +E
Sbjct: 165 IVKVLGKAKMVNKALSIFYQIKGRKCKPTSNTYNSMILMLMQEGHHEKVHELYNEMCNE- 223
Query: 197 KSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVS 256
PD + +I + K G + A LF M E G+ + Y +++ V
Sbjct: 224 -GDCLPDTVTYSALIAAFGKLGRDDSAISLFDEMKENGLHPTAKIYTTILGIYFKLGRVE 282
Query: 257 K---IYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILL 313
K + +M+ G V +Y LI GKA + EEA ++F ML G +P N L+
Sbjct: 283 KALGLVQEMKEKGCALTVYTYTELIKGVGKAGKVEEAYSIFMNMLKEGCKPDVVLINNLI 342
Query: 314 DAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKF--FRRLKQDG 371
+ +G + A +F+ M +C+P++ +Y T++ A S +E F + ++K++G
Sbjct: 343 NLLGKAGRLADAIKLFEEMESLQCTPNVVTYNTVIKALFE-SKARASEAFLWYEKMKENG 401
Query: 372 FVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAV 431
VP+ TY LI G+ K N +EK + + ++M G P + ++++A GK K +++A
Sbjct: 402 VVPSSFTYSILIDGFCKTNRVEKALLLLEEMDEKGFAPCPAAYCSLINALGKAKRYEAAN 461
Query: 432 VWYKEM-ESCGF 442
++E+ E+CG+
Sbjct: 462 ELFQELRENCGY 473
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 78/301 (25%), Positives = 143/301 (47%), Gaps = 42/301 (13%)
Query: 210 MIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSF---ETNYKEVSKIYDQMQRAG 266
++ + KA KA +F + R + ++ TYNS++ E ++++V ++Y++M G
Sbjct: 165 IVKVLGKAKMVNKALSIFYQIKGRKCKPTSNTYNSMILMLMQEGHHEKVHELYNEMCNEG 224
Query: 267 -LQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAF--------- 316
PD V+Y+ LI A+GK R++ A+++F+EM + G+ PT K Y +L +
Sbjct: 225 DCLPDTVTYSALIAAFGKLGRDDSAISLFDEMKENGLHPTAKIYTTILGIYFKLGRVEKA 284
Query: 317 --------------------------AISGMVDQARTVFKCMRRDRCSPDICSYTTMLSA 350
+G V++A ++F M ++ C PD+ +++
Sbjct: 285 LGLVQEMKEKGCALTVYTYTELIKGVGKAGKVEEAYSIFMNMLKEGCKPDVVLINNLINL 344
Query: 351 YVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGY--AKVNNLEKMMEIYDKMRVNGIK 408
A + A K F ++ PNV+TY T+IK +K E + Y+KM+ NG+
Sbjct: 345 LGKAGRLADAIKLFEEMESLQCTPNVVTYNTVIKALFESKARASEAFL-WYEKMKENGVV 403
Query: 409 PNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANEL 468
P+ ++ ++D + K + A++ +EM+ GF P A L++ A ANEL
Sbjct: 404 PSSFTYSILIDGFCKTNRVEKALLLLEEMDEKGFAPCPAAYCSLINALGKAKRYEAANEL 463
Query: 469 L 469
Sbjct: 464 F 464
Score = 45.4 bits (106), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 34/149 (22%), Positives = 64/149 (42%), Gaps = 1/149 (0%)
Query: 308 AYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRL 367
Y L+ +GM+ + + M R C + ++ A + A F ++
Sbjct: 126 TYMALIHCLDEAGMLGEMWKTIQEMVRSTCVIGPADLSEIVKVLGKAKMVNKALSIFYQI 185
Query: 368 KQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNG-IKPNQTIFTTIMDAYGKNKD 426
K P TY ++I + + EK+ E+Y++M G P+ ++ ++ A+GK
Sbjct: 186 KGRKCKPTSNTYNSMILMLMQEGHHEKVHELYNEMCNEGDCLPDTVTYSALIAAFGKLGR 245
Query: 427 FDSAVVWYKEMESCGFPPDQKAKNILLSL 455
DSA+ + EM+ G P K +L +
Sbjct: 246 DDSAISLFDEMKENGLHPTAKIYTTILGI 274
>gi|414885834|tpg|DAA61848.1| TPA: leaf protein [Zea mays]
Length = 637
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 86/327 (26%), Positives = 171/327 (52%), Gaps = 8/327 (2%)
Query: 99 FLMLITAYGKQGDFNKAEKVLSFMNKKGYA-PSVVSHTALMEAYGRGGRYKNAEAIFRRM 157
F LI YG G ++++V M +G P++ ++ L++A+ + A + +M
Sbjct: 175 FNTLIKGYGIVGKPEESQRVFDMMGVEGSVRPNLTTYNILVKAWCDHRNLEEAWGVVGKM 234
Query: 158 QSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKA 217
Q+ G P +TY I + ++ AEE L+ E ++ ++ ++ + ++I Y +
Sbjct: 235 QAGGFEPDIVTYNTIASAYANNDETWRAEE----LIVEIQTRVRTSERTWGIIIGGYCRE 290
Query: 218 GGYEKARKLFALMAERGVQQSTVTYNSLMS--FETN-YKEVSKIYDQMQRAGLQPDVVSY 274
G E+A + M + G + V +N+L+ + N V+KI M++ G++PD+V+Y
Sbjct: 291 GRLEEALRCVQQMKDAGSVPNVVIFNTLLKGFLDANDMAAVNKILGLMEKFGIKPDIVTY 350
Query: 275 ALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRR 334
+ +N + + + VF++M++AG+ P + Y+IL F + ++A + M
Sbjct: 351 SHQLNTFSSLGHMAKCMHVFDKMIEAGIEPDPQVYSILAKGFVRAQQPEKAEDLLLQMSH 410
Query: 335 DRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEK 394
P++ ++TT++S + + +DME A + + ++ + G PN+ T+ TLI GY++ K
Sbjct: 411 LGLCPNVVTFTTVISGWCSVADMESAMRVYDKMCKSGVYPNLRTFETLIWGYSEQKQPWK 470
Query: 395 MMEIYDKMRVNGIKPNQTIFTTIMDAY 421
E+ MR G+KP Q+ + I DA+
Sbjct: 471 AEEVLQMMRETGVKPKQSTYCLIADAW 497
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 108/464 (23%), Positives = 187/464 (40%), Gaps = 83/464 (17%)
Query: 114 KAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIIL 173
+A V + +G+ PS+V++T L+ A +++ ++ ++ +G RP ++ + ++
Sbjct: 85 QAHSVFKHLMDEGHKPSLVTYTILLTALTNQRMFESIPSLLAEVELAGVRPDSIFFNALI 144
Query: 174 KLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAER 233
FVEA + EA F + + S P F+ +I Y G E+++++F +M
Sbjct: 145 NAFVEAKRMGEAINTFWKM---KHSGCHPTTSTFNTLIKGYGIVGKPEESQRVFDMMGVE 201
Query: 234 G-VQQSTVTYNSLMSF---ETNYKEVSKIYDQMQRAGLQPDVVSY--------------- 274
G V+ + TYN L+ N +E + +MQ G +PD+V+Y
Sbjct: 202 GSVRPNLTTYNILVKAWCDHRNLEEAWGVVGKMQAGGFEPDIVTYNTIASAYANNDETWR 261
Query: 275 -------------------ALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDA 315
++I Y + R EEAL ++M DAG P +N LL
Sbjct: 262 AEELIVEIQTRVRTSERTWGIIIGGYCREGRLEEALRCVQQMKDAGSVPNVVIFNTLLKG 321
Query: 316 FAISGMVDQARTVFKCMRRDRCSPDICSYTTMLS-------------------------- 349
F + + + M + PDI +Y+ L+
Sbjct: 322 FLDANDMAAVNKILGLMEKFGIKPDIVTYSHQLNTFSSLGHMAKCMHVFDKMIEAGIEPD 381
Query: 350 ---------AYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYD 400
+V A E AE ++ G PNV+T+ T+I G+ V ++E M +YD
Sbjct: 382 PQVYSILAKGFVRAQQPEKAEDLLLQMSHLGLCPNVVTFTTVISGWCSVADMESAMRVYD 441
Query: 401 KMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTAD 460
KM +G+ PN F T++ Y + K A + M G P Q ++ K
Sbjct: 442 KMCKSGVYPNLRTFETLIWGYSEQKQPWKAEEVLQMMRETGVKPKQSTYCLIADAWK--- 498
Query: 461 ERNEANELLGNFNHPNNEPGINGLSISVDEEDDDDDDDEDDDDN 504
A L N N+ N P +D +D+ + +D+N
Sbjct: 499 ----AVGLTENINNSNGSPNGPYAIEKLDHSNDNCNVRISEDNN 538
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 93/187 (49%), Gaps = 1/187 (0%)
Query: 284 ARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICS 343
+++ +A +VF+ ++D G +P+ Y ILL A M + ++ + PD
Sbjct: 80 SKKPYQAHSVFKHLMDEGHKPSLVTYTILLTALTNQRMFESIPSLLAEVELAGVRPDSIF 139
Query: 344 YTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMR 403
+ +++A+V A M A F ++K G P T+ TLIKGY V E+ ++D M
Sbjct: 140 FNALINAFVEAKRMGEAINTFWKMKHSGCHPTTSTFNTLIKGYGIVGKPEESQRVFDMMG 199
Query: 404 VNG-IKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADER 462
V G ++PN T + ++ A+ +++ + A +M++ GF PD N + S DE
Sbjct: 200 VEGSVRPNLTTYNILVKAWCDHRNLEEAWGVVGKMQAGGFEPDIVTYNTIASAYANNDET 259
Query: 463 NEANELL 469
A EL+
Sbjct: 260 WRAEELI 266
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 53/241 (21%), Positives = 117/241 (48%), Gaps = 6/241 (2%)
Query: 86 LRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGG 145
+ IQ+ +E + ++I Y ++G +A + + M G P+VV L++ +
Sbjct: 267 VEIQTRVRTSERTWGIIIGGYCREGRLEEALRCVQQMKDAGSVPNVVIFNTLLKGFLDAN 326
Query: 146 RYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQK 205
I M+ G +P +TY L F + VF +++ + ++PD +
Sbjct: 327 DMAAVNKILGLMEKFGIKPDIVTYSHQLNTFSSLGHMAKCMHVFDKMIE---AGIEPDPQ 383
Query: 206 MFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVS---KIYDQM 262
++ ++ + +A EKA L M+ G+ + VT+ +++S + ++ ++YD+M
Sbjct: 384 VYSILAKGFVRAQQPEKAEDLLLQMSHLGLCPNVVTFTTVISGWCSVADMESAMRVYDKM 443
Query: 263 QRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMV 322
++G+ P++ ++ LI Y + ++ +A V + M + GV+P Y ++ DA+ G+
Sbjct: 444 CKSGVYPNLRTFETLIWGYSEQKQPWKAEEVLQMMRETGVKPKQSTYCLIADAWKAVGLT 503
Query: 323 D 323
+
Sbjct: 504 E 504
>gi|414591648|tpg|DAA42219.1| TPA: PPR-814b [Zea mays]
Length = 827
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 92/355 (25%), Positives = 171/355 (48%), Gaps = 6/355 (1%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
++ A K +KAE L M K P+ ++ L+ Y G++K A +F+ M+
Sbjct: 273 VVHALCKARAMDKAEAFLRQMVNKRVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHS 332
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
P +T +++ + K KEA +VF T+ + ++P D +++M+ Y G
Sbjct: 333 ILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNP---DVFSYNIMLNGYATKGCLV 389
Query: 222 KARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSK---IYDQMQRAGLQPDVVSYALLI 278
LF LM G+ T+N L+ N + K I+++M+ G++PDVV+Y +I
Sbjct: 390 DMTDLFDLMLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVI 449
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCS 338
A + + ++A+ F +M+D GV P AYN L+ F G + +A+ + + +
Sbjct: 450 AALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMH 509
Query: 339 PDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEI 398
DI ++++++ + A+ F G P+ + Y L+ GY V +EK + +
Sbjct: 510 LDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYSMLMDGYCLVGKMEKALRV 569
Query: 399 YDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILL 453
+D M GI+PN ++ T+++ Y K D + ++EM G P +I++
Sbjct: 570 FDAMVSAGIEPNVVVYCTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIII 624
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 90/363 (24%), Positives = 166/363 (45%), Gaps = 11/363 (3%)
Query: 91 WWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNA 150
++ FN +LI AY G +KA + + M G P VV++ ++ A R G+ +A
Sbjct: 407 FYTFN-----VLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDA 461
Query: 151 EAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMM 210
F +M G P Y +++ F +A+E+ +++ + + D F +
Sbjct: 462 MEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMN---NGMHLDIVFFSSI 518
Query: 211 IYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLM---SFETNYKEVSKIYDQMQRAGL 267
I K G A+ +F L G+ V Y+ LM ++ +++D M AG+
Sbjct: 519 INNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGI 578
Query: 268 QPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQART 327
+P+VV Y L+N Y K R +E L++F EML G++P+ Y+I++D +G A+
Sbjct: 579 EPNVVVYCTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFQAGRTVPAKM 638
Query: 328 VFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYA 387
F M + DIC+Y +L + A F+ L+ N+IT T+I G
Sbjct: 639 KFHEMTESGIAMDICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIDGMF 698
Query: 388 KVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQK 447
+ +E+ +++ + + + PN ++ ++ K + A + M++ G P+ +
Sbjct: 699 QTRRVEEAKDLFASISRSRLVPNVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPNSR 758
Query: 448 AKN 450
N
Sbjct: 759 LLN 761
Score = 134 bits (338), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 97/364 (26%), Positives = 169/364 (46%), Gaps = 8/364 (2%)
Query: 113 NKAEKVLSFMN---KKGYAPSVVSHTALMEAYGRGGRYKNA-EAIFRRMQSSGPRPSALT 168
++ E L+F + G +++ L+E + R A + + R G P +
Sbjct: 138 HRPELALAFFGQLLRTGLRVNIIIANHLLEGFCEAKRTDEALDILLHRTPELGCVPDVFS 197
Query: 169 YQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFA 228
Y I+LK + K +A+++ + ++ E + P+ ++ +I + K G KA LF
Sbjct: 198 YSILLKSLCDQGKSGQADDL-LRMMAEGGAVCSPNVVAYNTVIDGFFKEGDVNKACDLFK 256
Query: 229 LMAERGVQQSTVTYNSLMSFETNYKEVSK---IYDQMQRAGLQPDVVSYALLINAYGKAR 285
M +RG+ VTYNS++ + + K QM + P+ +Y LI Y
Sbjct: 257 EMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPNNWTYNNLIYGYSSTG 316
Query: 286 REEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYT 345
+ +EA+ VF+EM + P ++L+ + G + +AR VF M +PD+ SY
Sbjct: 317 QWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYN 376
Query: 346 TMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVN 405
ML+ Y + F + DG P+ T+ LIK YA L+K M I+++MR +
Sbjct: 377 IMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDH 436
Query: 406 GIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEA 465
G+KP+ + T++ A + D A+ + +M G PD+ A N L+ T +A
Sbjct: 437 GVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKA 496
Query: 466 NELL 469
EL+
Sbjct: 497 KELI 500
Score = 131 bits (330), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 94/441 (21%), Positives = 190/441 (43%), Gaps = 11/441 (2%)
Query: 44 AVAVLRSERTRGQPLPKDLVLGTLVRLKQLKKWNVVSEVLEWLRIQSWWDFNE--MDFLM 101
AV V + R R LP + L L + L K+ + E + + N + +
Sbjct: 321 AVRVFKEMR-RHSILPDVVTLSML--MGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNI 377
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
++ Y +G + M G AP + L++AY G A IF M+ G
Sbjct: 378 MLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHG 437
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
+P +TY+ ++ K +A E F ++D+ + PD+ ++ +I + G
Sbjct: 438 VKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQG---VAPDKYAYNCLIQGFCTHGSLL 494
Query: 222 KARKLFALMAERGVQQSTVTYNSLMSFETNYKEV---SKIYDQMQRAGLQPDVVSYALLI 278
KA++L + + G+ V ++S+++ V I+D GL PD V Y++L+
Sbjct: 495 KAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYSMLM 554
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCS 338
+ Y + E+AL VF+ M+ AG+ P Y L++ + G +D+ ++F+ M +
Sbjct: 555 DGYCLVGKMEKALRVFDAMVSAGIEPNVVVYCTLVNGYCKIGRIDEGLSLFREMLQRGIK 614
Query: 339 PDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEI 398
P Y+ ++ A A+ F + + G ++ TY +++G K ++ + +
Sbjct: 615 PSTILYSIIIDGLFQAGRTVPAKMKFHEMTESGIAMDICTYNIVLRGLFKNRCFDEAIFL 674
Query: 399 YDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKT 458
+ ++R +K N T++D + + + A + + P+ +I+++
Sbjct: 675 FKELRAMNVKINIITLNTMIDGMFQTRRVEEAKDLFASISRSRLVPNVVTYSIMITNLIK 734
Query: 459 ADERNEANELLGNFNHPNNEP 479
EA ++ + + EP
Sbjct: 735 EGLVEEAEDMFSSMQNAGCEP 755
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 86/326 (26%), Positives = 160/326 (49%), Gaps = 13/326 (3%)
Query: 128 APSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEE 187
+P+ ++ LM+ R R + A A F ++ +G R + + +L+ F EA + EA +
Sbjct: 121 SPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLEGFCEAKRTDEALD 180
Query: 188 VFMTLLDEEKSP---LKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQS--TVTY 242
+ + ++P PD + +++ G +A L +MAE G S V Y
Sbjct: 181 ILL-----HRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAY 235
Query: 243 NSLM-SF--ETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLD 299
N+++ F E + + ++ +M + G+ PD+V+Y +++A KAR ++A A +M++
Sbjct: 236 NTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVN 295
Query: 300 AGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEG 359
V P + YN L+ ++ +G +A VFK MRR PD+ + + ++ + ++
Sbjct: 296 KRVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKE 355
Query: 360 AEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMD 419
A F + G P+V +Y ++ GYA L M +++D M +GI P+ F ++
Sbjct: 356 ARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIK 415
Query: 420 AYGKNKDFDSAVVWYKEMESCGFPPD 445
AY D A++ + EM G PD
Sbjct: 416 AYANCGMLDKAMIIFNEMRDHGVKPD 441
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 106/225 (47%), Gaps = 7/225 (3%)
Query: 267 LQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQAR 326
L P +YA+L++ +A R E ALA F ++L G+R N LL+ F + D+A
Sbjct: 120 LSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLEGFCEAKRTDEAL 179
Query: 327 TVFKCMRRDR---CSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFV--PNVITYGT 381
+ + R C PD+ SY+ +L + + A+ R + + G V PNV+ Y T
Sbjct: 180 DIL--LHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAYNT 237
Query: 382 LIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCG 441
+I G+ K ++ K +++ +M GI P+ + +++ A K + D A + ++M +
Sbjct: 238 VIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKR 297
Query: 442 FPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGINGLSI 486
P+ N L+ + + EA + + P + LS+
Sbjct: 298 VLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSM 342
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/232 (24%), Positives = 108/232 (46%), Gaps = 7/232 (3%)
Query: 233 RGVQQSTVTYNSLMSFET--NYKEVS-KIYDQMQRAGLQPDVVSYALLINAYGKARREEE 289
R + ++ TY LM T + E++ + Q+ R GL+ +++ L+ + +A+R +E
Sbjct: 118 RVLSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLEGFCEAKRTDE 177
Query: 290 ALAVF-EEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRD--RCSPDICSYTT 346
AL + + G P +Y+ILL + G QA + + M CSP++ +Y T
Sbjct: 178 ALDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAYNT 237
Query: 347 MLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNG 406
++ + D+ A F+ + Q G P+++TY +++ K ++K +M
Sbjct: 238 VIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKR 297
Query: 407 IKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILL-SLAK 457
+ PN + ++ Y + AV +KEM PD ++L+ SL K
Sbjct: 298 VLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCK 349
>gi|125572252|gb|EAZ13767.1| hypothetical protein OsJ_03693 [Oryza sativa Japonica Group]
Length = 715
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 92/407 (22%), Positives = 180/407 (44%), Gaps = 44/407 (10%)
Query: 97 MDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRR 156
+ + +L+ A K F +A +VL M KG P++V++ ++ R GR +A R
Sbjct: 212 VTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREFLNR 271
Query: 157 MQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKK 216
+ S G +P ++Y +LK A ++++ EE+F ++++ P++ F M++ + +
Sbjct: 272 LSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKN---CMPNEVTFDMLVRFFCR 328
Query: 217 AGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSKIY---DQMQRAGLQPDVVS 273
G E+A ++ M+ G +T N +++ V + + M G PD +S
Sbjct: 329 GGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDTIS 388
Query: 274 YALLINAYGKARREEEALAVFEEMLDAGVRPTH--------------------------- 306
Y ++ +A R E+A + +EM+ P
Sbjct: 389 YTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQATMLIEQMS 448
Query: 307 --------KAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDME 358
YN L++ F + G VD A +F M C P+ +YTT+L+ NA ++
Sbjct: 449 EHGCEVNIVTYNALVNGFCVQGRVDSALELFYSM---PCKPNTITYTTLLTGLCNAERLD 505
Query: 359 GAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIM 418
A + + Q PNV+T+ L+ + + +++ +E+ ++M +G PN + T++
Sbjct: 506 AAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQMMEHGCTPNLITYNTLL 565
Query: 419 DAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEA 465
D K+ + + A+ + S G PD + ++ + D EA
Sbjct: 566 DGITKDCNSEEALELLHGLVSNGVSPDIVTYSSIIGVLSREDRVEEA 612
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 94/400 (23%), Positives = 187/400 (46%), Gaps = 4/400 (1%)
Query: 70 LKQLKKWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAP 129
L K+W V E+ + ++ NE+ F ML+ + + G +A +VL M+ G A
Sbjct: 291 LCAAKRWEDVEELFAEMMEKNCMP-NEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAA 349
Query: 130 SVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVF 189
+ ++ + GR +A M S G P ++Y +LK A ++++A+E+
Sbjct: 350 NTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELL 409
Query: 190 MTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFE 249
++ + P++ F+ I + + G E+A L M+E G + + VTYN+L++
Sbjct: 410 KEMV---RKNCPPNEVTFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGF 466
Query: 250 TNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAY 309
V + +P+ ++Y L+ A R + A + EML P +
Sbjct: 467 CVQGRVDSALELFYSMPCKPNTITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTF 526
Query: 310 NILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQ 369
N+L+ F G++D+A + + M C+P++ +Y T+L + E A + L
Sbjct: 527 NVLVSFFCQKGLMDEAIELVEQMMEHGCTPNLITYNTLLDGITKDCNSEEALELLHGLVS 586
Query: 370 DGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDS 429
+G P+++TY ++I ++ + +E+ ++++ ++ G++P I+ I+ A K + D
Sbjct: 587 NGVSPDIVTYSSIIGVLSREDRVEEAIKMFHIVQDLGMRPKAVIYNKILLALCKRCNTDG 646
Query: 430 AVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELL 469
A+ ++ M S G P++ L+ D E +LL
Sbjct: 647 AIDFFAYMVSNGCMPNELTYITLIEGLANEDFLKETRDLL 686
Score = 115 bits (289), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 99/428 (23%), Positives = 180/428 (42%), Gaps = 51/428 (11%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
LI ++G + A +VL + G A V ++ L+ Y R G+ A RR+ +S
Sbjct: 115 LIRNLCRRGRTSDAARVLRAAERSGTAVDVFAYNTLVAGYCRYGQLDAA----RRLIASM 170
Query: 162 P-RPSALTYQIILKLFVEANKFKEAEEVFMTLLDEE-KSPLKPDQKMFHMMIYMYKKAGG 219
P P A TY I++ + + EA ++LLD+ +P + +++ K+ G
Sbjct: 171 PVAPDAYTYTPIIRGLCDRGRVGEA----LSLLDDMLHRGCQPSVVTYTVLLEAVCKSTG 226
Query: 220 YEKARKLFALMAERGVQQSTVTYNSL---MSFETNYKEVSKIYDQMQRAGLQPDVVSYAL 276
+ +A ++ M +G + VTYN + M E + + +++ G QPD VSY
Sbjct: 227 FGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREFLNRLSSYGFQPDTVSYTT 286
Query: 277 LINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQA----------- 325
++ A+R E+ +F EM++ P +++L+ F GMV++A
Sbjct: 287 VLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHG 346
Query: 326 ------------RTVFKCMRRD------------RCSPDICSYTTMLSAYVNASDMEGAE 361
T+ K R D CSPD SYTT+L A E A+
Sbjct: 347 CAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAK 406
Query: 362 KFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAY 421
+ + + + PN +T+ T I + +E+ + ++M +G + N + +++ +
Sbjct: 407 ELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGF 466
Query: 422 GKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGI 481
DSA+ + M P+ LL+ A+ + A ELL + P +
Sbjct: 467 CVQGRVDSALELFYSMPC---KPNTITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNV 523
Query: 482 NGLSISVD 489
++ V
Sbjct: 524 VTFNVLVS 531
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 91/375 (24%), Positives = 153/375 (40%), Gaps = 47/375 (12%)
Query: 114 KAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIIL 173
+A +++ +G AP V T L+ R GR +A + R + SG
Sbjct: 92 RAARLVDRATSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAERSG------------ 139
Query: 174 KLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAER 233
A +VF ++ ++ Y + G + AR+L A M
Sbjct: 140 ----------TAVDVFA----------------YNTLVAGYCRYGQLDAARRLIASMP-- 171
Query: 234 GVQQSTVTYNSLMSFETNYKEVSK---IYDQMQRAGLQPDVVSYALLINAYGKARREEEA 290
V TY ++ + V + + D M G QP VV+Y +L+ A K+ +A
Sbjct: 172 -VAPDAYTYTPIIRGLCDRGRVGEALSLLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQA 230
Query: 291 LAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSA 350
+ V +EM G P YN++++ G VD AR + PD SYTT+L
Sbjct: 231 MEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKG 290
Query: 351 YVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPN 410
A E E+ F + + +PN +T+ L++ + + +E+ +++ ++M +G N
Sbjct: 291 LCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAAN 350
Query: 411 QTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLG 470
T+ +++ K D A + M S G PD + +L A+ +A ELL
Sbjct: 351 TTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLK 410
Query: 471 NF---NHPNNEPGIN 482
N P NE N
Sbjct: 411 EMVRKNCPPNEVTFN 425
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 80/341 (23%), Positives = 159/341 (46%), Gaps = 45/341 (13%)
Query: 70 LKQLKKWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAP 129
L + ++W E+L+ + ++ NE+ F I ++G +A ++ M++ G
Sbjct: 396 LCRAERWEDAKELLKEM-VRKNCPPNEVTFNTFICILCQKGLIEQATMLIEQMSEHGCEV 454
Query: 130 SVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVF 189
++V++ AL+ + GR +A +F M +P+ +TY +L A + A E+
Sbjct: 455 NIVTYNALVNGFCVQGRVDSALELFYSMPC---KPNTITYTTLLTGLCNAERLDAAAELL 511
Query: 190 MTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLM--- 246
+L ++ +P + F++++ + + G ++A +L M E G + +TYN+L+
Sbjct: 512 AEMLQKDCAP---NVVTFNVLVSFFCQKGLMDEAIELVEQMMEHGCTPNLITYNTLLDGI 568
Query: 247 SFETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTH 306
+ + N +E ++ + G+ PD+V+Y+ +I + R EEA+ +F + D G+RP
Sbjct: 569 TKDCNSEEALELLHGLVSNGVSPDIVTYSSIIGVLSREDRVEEAIKMFHIVQDLGMRPKA 628
Query: 307 KAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRR 366
YN +L A RC+ D GA FF
Sbjct: 629 VIYNKILLALC-----------------KRCNTD------------------GAIDFFAY 653
Query: 367 LKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGI 407
+ +G +PN +TY TLI+G A + L++ ++ ++ G+
Sbjct: 654 MVSNGCMPNELTYITLIEGLANEDFLKETRDLLRELCSRGV 694
>gi|115475728|ref|NP_001061460.1| Os08g0290000 [Oryza sativa Japonica Group]
gi|38175588|dbj|BAD01297.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|38175668|dbj|BAD01373.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113623429|dbj|BAF23374.1| Os08g0290000 [Oryza sativa Japonica Group]
gi|125602875|gb|EAZ42200.1| hypothetical protein OsJ_26764 [Oryza sativa Japonica Group]
Length = 806
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 95/347 (27%), Positives = 173/347 (49%), Gaps = 9/347 (2%)
Query: 114 KAEKVLSFMNK---KGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQ 170
+ E V+S N+ +G P+ TA M +GG+++ A I+ + + G + T
Sbjct: 412 RLESVVSITNEMVTRGMRPNDPLMTACMRELCKGGKHQEAVGIWFKTLNKGLGVNLATSN 471
Query: 171 IILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALM 230
++ E KEA +V T+L++ ++ D +++MI K E+A KL M
Sbjct: 472 ALIHGLCEGKYMKEATKVIQTMLNKG---IELDSITYNIMIRGCCKDSKMEEAIKLHGDM 528
Query: 231 AERGVQQSTVTYNSLMSFETNY---KEVSKIYDQMQRAGLQPDVVSYALLINAYGKARRE 287
RG + T+N+L+ N +E + DQM+ GLQPD+VSY +I+ + KA+
Sbjct: 529 TRRGFKPDLFTFNTLLHAYCNLGKMEETFHLLDQMKTEGLQPDIVSYGTIIDGHCKAKDI 588
Query: 288 EEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTM 347
+A E++D G++P YN L+ + +G + A + M+ + P +Y ++
Sbjct: 589 RKAKEYLTELMDRGLKPNVFIYNALIGGYGRNGDISGAIDAVETMKSNGIQPTNVTYGSL 648
Query: 348 LSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGI 407
+ +A +E A+ F + +++ VI Y +I+GY K+ + + + +++MR GI
Sbjct: 649 MYWMCHAGLVEEAKTIFSQARENNVDLGVIGYTIMIQGYCKLGKMVEAVAYFEEMRSRGI 708
Query: 408 KPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLS 454
PN+ +TT+M AY K+ + + A + EM G PD L++
Sbjct: 709 SPNKLTYTTLMYAYSKSGNSEEASKLFDEMVGSGVIPDNITYGTLIA 755
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 114/520 (21%), Positives = 208/520 (40%), Gaps = 79/520 (15%)
Query: 44 AVAVLRSERTRGQPLPK----DLVLGTLVRLKQLKKWNVVSEVLEWLRIQSWWDFNEMDF 99
A R +RG P P + L LVR QL + EV + +R NE +
Sbjct: 169 AADAFRVLSSRGAP-PSIKTCNAFLEALVRAGQL---DAAREVFDEMRESRNVALNEYSY 224
Query: 100 LMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQS 159
+I A K G + ++L+ + + G P+VV++ LM+A + GR + A + RM+
Sbjct: 225 TAMIKALCKAGKVDAGFEMLAELWRAGLQPTVVTYNVLMDALCKSGRVEEAFRLKGRMEQ 284
Query: 160 SGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSP-------------------- 199
G PS +T+ I++ +F E V + SP
Sbjct: 285 GGMTPSVVTFGILINGLARGERFGEVGIVLQEMEQLGVSPNEVIYNELIGWHCRKGHCSQ 344
Query: 200 ------------LKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMS 247
+KP ++++ K G E+A ++ M G+ +N++++
Sbjct: 345 ALRLFDEMVLKKMKPTAVTYNLIAKALCKEGEMERAERILEDMLSIGMTVHCGLFNTVVA 404
Query: 248 F----ETNYKEVSKIYDQMQRAGLQPD--------------------------------- 270
+ + V I ++M G++P+
Sbjct: 405 WLLQRTRRLESVVSITNEMVTRGMRPNDPLMTACMRELCKGGKHQEAVGIWFKTLNKGLG 464
Query: 271 --VVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTV 328
+ + LI+ + + +EA V + ML+ G+ YNI++ +++A +
Sbjct: 465 VNLATSNALIHGLCEGKYMKEATKVIQTMLNKGIELDSITYNIMIRGCCKDSKMEEAIKL 524
Query: 329 FKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAK 388
M R PD+ ++ T+L AY N ME ++K +G P++++YGT+I G+ K
Sbjct: 525 HGDMTRRGFKPDLFTFNTLLHAYCNLGKMEETFHLLDQMKTEGLQPDIVSYGTIIDGHCK 584
Query: 389 VNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKA 448
++ K E ++ G+KPN I+ ++ YG+N D A+ + M+S G P
Sbjct: 585 AKDIRKAKEYLTELMDRGLKPNVFIYNALIGGYGRNGDISGAIDAVETMKSNGIQPTNVT 644
Query: 449 KNILLSLAKTADERNEANELLGNFNHPNNEPGINGLSISV 488
L+ A EA + N + G+ G +I +
Sbjct: 645 YGSLMYWMCHAGLVEEAKTIFSQARENNVDLGVIGYTIMI 684
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 85/347 (24%), Positives = 141/347 (40%), Gaps = 45/347 (12%)
Query: 98 DFLM--LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFR 155
DFL+ IT+ QG +A ++ +G PS+ + A +EA R G+ A +F
Sbjct: 151 DFLIHTFITSPA-QGSLCRAADAFRVLSSRGAPPSIKTCNAFLEALVRAGQLDAAREVFD 209
Query: 156 RMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYK 215
M+ S R AL ++ + MI
Sbjct: 210 EMRES--RNVAL-----------------------------------NEYSYTAMIKALC 232
Query: 216 KAGGYEKARKLFALMAERGVQQSTVTYNSLM---SFETNYKEVSKIYDQMQRAGLQPDVV 272
KAG + ++ A + G+Q + VTYN LM +E ++ +M++ G+ P VV
Sbjct: 233 KAGKVDAGFEMLAELWRAGLQPTVVTYNVLMDALCKSGRVEEAFRLKGRMEQGGMTPSVV 292
Query: 273 SYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCM 332
++ +LIN + R E V +EM GV P YN L+ G QA +F M
Sbjct: 293 TFGILINGLARGERFGEVGIVLQEMEQLGVSPNEVIYNELIGWHCRKGHCSQALRLFDEM 352
Query: 333 RRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYA-KVNN 391
+ P +Y + A +ME AE+ + G + + T++ +
Sbjct: 353 VLKKMKPTAVTYNLIAKALCKEGEMERAERILEDMLSIGMTVHCGLFNTVVAWLLQRTRR 412
Query: 392 LEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAV-VWYKEM 437
LE ++ I ++M G++PN + T M K AV +W+K +
Sbjct: 413 LESVVSITNEMVTRGMRPNDPLMTACMRELCKGGKHQEAVGIWFKTL 459
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/269 (21%), Positives = 119/269 (44%), Gaps = 9/269 (3%)
Query: 218 GGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEV---SKIYDQMQRA-GLQPDVVS 273
G +A F +++ RG S T N+ + ++ +++D+M+ + + + S
Sbjct: 164 GSLCRAADAFRVLSSRGAPPSIKTCNAFLEALVRAGQLDAAREVFDEMRESRNVALNEYS 223
Query: 274 YALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMR 333
Y +I A KA + + + E+ AG++PT YN+L+DA SG V++A + M
Sbjct: 224 YTAMIKALCKAGKVDAGFEMLAELWRAGLQPTVVTYNVLMDALCKSGRVEEAFRLKGRME 283
Query: 334 RDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLE 393
+ +P + ++ +++ + ++Q G PN + Y LI + + +
Sbjct: 284 QGGMTPSVVTFGILINGLARGERFGEVGIVLQEMEQLGVSPNEVIYNELIGWHCRKGHCS 343
Query: 394 KMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILL 453
+ + ++D+M + +KP + I A K + + A ++M S G N ++
Sbjct: 344 QALRLFDEMVLKKMKPTAVTYNLIAKALCKEGEMERAERILEDMLSIGMTVHCGLFNTVV 403
Query: 454 SLAKTADERNEA-----NELLGNFNHPNN 477
+ R E+ NE++ PN+
Sbjct: 404 AWLLQRTRRLESVVSITNEMVTRGMRPND 432
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 42/90 (46%)
Query: 93 DFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEA 152
D + + ++I Y K G +A M +G +P+ +++T LM AY + G + A
Sbjct: 674 DLGVIGYTIMIQGYCKLGKMVEAVAYFEEMRSRGISPNKLTYTTLMYAYSKSGNSEEASK 733
Query: 153 IFRRMQSSGPRPSALTYQIILKLFVEANKF 182
+F M SG P +TY ++ E N
Sbjct: 734 LFDEMVGSGVIPDNITYGTLIARCSEVNSL 763
>gi|195613918|gb|ACG28789.1| leaf protein [Zea mays]
Length = 637
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 86/327 (26%), Positives = 171/327 (52%), Gaps = 8/327 (2%)
Query: 99 FLMLITAYGKQGDFNKAEKVLSFMNKKGYA-PSVVSHTALMEAYGRGGRYKNAEAIFRRM 157
F LI YG G ++++V M +G P++ ++ L++A+ + A + +M
Sbjct: 175 FNTLIKGYGIVGKPEESQRVFDMMGVEGSVRPNLTTYNILVKAWCDHRNLEEAWGVVGKM 234
Query: 158 QSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKA 217
Q+ G P +TY I + ++ AEE L+ E ++ ++ ++ + ++I Y +
Sbjct: 235 QAGGFEPDIVTYNTIASAYANNDETWRAEE----LIVEIQTRVRTSERTWGIIIGGYCRE 290
Query: 218 GGYEKARKLFALMAERGVQQSTVTYNSLMS--FETN-YKEVSKIYDQMQRAGLQPDVVSY 274
G E+A + M + G + V +N+L+ + N V+KI M++ G++PD+V+Y
Sbjct: 291 GRLEEALRCVQQMKDAGSVPNVVIFNTLLKGFLDANDMAAVNKILGLMKKFGIKPDIVTY 350
Query: 275 ALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRR 334
+ +N + + + VF++M++AG+ P + Y+IL F + ++A + M
Sbjct: 351 SHQLNTFSSLGHMAKCMHVFDKMIEAGIEPDPQVYSILAKGFVRAQQPEKAEDLLLQMSH 410
Query: 335 DRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEK 394
P++ ++TT++S + + +DME A + + ++ + G PN+ T+ TLI GY++ K
Sbjct: 411 LGLCPNVVTFTTVISGWCSVADMESAMRVYDKMCKSGVYPNLRTFETLIWGYSEQKQPWK 470
Query: 395 MMEIYDKMRVNGIKPNQTIFTTIMDAY 421
E+ MR G+KP Q+ + I DA+
Sbjct: 471 AEEVLQMMRETGVKPKQSTYCLIADAW 497
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 108/464 (23%), Positives = 188/464 (40%), Gaps = 83/464 (17%)
Query: 114 KAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIIL 173
+A V + +G+ PS+V++T L+ A +++ ++ ++ +G RP ++ + ++
Sbjct: 85 QAHSVFKHLMDEGHKPSLVTYTILLTALTNQRMFESIPSLLAEVELAGVRPDSIFFNALI 144
Query: 174 KLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAER 233
FVEA + EA F + + S P F+ +I Y G E+++++F +M
Sbjct: 145 NAFVEAKRMGEAINTFWKM---KHSGCHPTTSTFNTLIKGYGIVGKPEESQRVFDMMGVE 201
Query: 234 G-VQQSTVTYNSLMSF---ETNYKEVSKIYDQMQRAGLQPDVVSY--------------- 274
G V+ + TYN L+ N +E + +MQ G +PD+V+Y
Sbjct: 202 GSVRPNLTTYNILVKAWCDHRNLEEAWGVVGKMQAGGFEPDIVTYNTIASAYANNDETWR 261
Query: 275 -------------------ALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDA 315
++I Y + R EEAL ++M DAG P +N LL
Sbjct: 262 AEELIVEIQTRVRTSERTWGIIIGGYCREGRLEEALRCVQQMKDAGSVPNVVIFNTLLKG 321
Query: 316 FAISGMVDQARTVFKCMRRDRCSPDICSYTTMLS-------------------------- 349
F + + + M++ PDI +Y+ L+
Sbjct: 322 FLDANDMAAVNKILGLMKKFGIKPDIVTYSHQLNTFSSLGHMAKCMHVFDKMIEAGIEPD 381
Query: 350 ---------AYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYD 400
+V A E AE ++ G PNV+T+ T+I G+ V ++E M +YD
Sbjct: 382 PQVYSILAKGFVRAQQPEKAEDLLLQMSHLGLCPNVVTFTTVISGWCSVADMESAMRVYD 441
Query: 401 KMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTAD 460
KM +G+ PN F T++ Y + K A + M G P Q ++ K
Sbjct: 442 KMCKSGVYPNLRTFETLIWGYSEQKQPWKAEEVLQMMRETGVKPKQSTYCLIADAWK--- 498
Query: 461 ERNEANELLGNFNHPNNEPGINGLSISVDEEDDDDDDDEDDDDN 504
A L N N+ N P +D +D+ + +D+N
Sbjct: 499 ----AVGLTENINNSNGSPNGPYAIEKLDHSNDNCNVRISEDNN 538
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 93/187 (49%), Gaps = 1/187 (0%)
Query: 284 ARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICS 343
+++ +A +VF+ ++D G +P+ Y ILL A M + ++ + PD
Sbjct: 80 SKKPYQAHSVFKHLMDEGHKPSLVTYTILLTALTNQRMFESIPSLLAEVELAGVRPDSIF 139
Query: 344 YTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMR 403
+ +++A+V A M A F ++K G P T+ TLIKGY V E+ ++D M
Sbjct: 140 FNALINAFVEAKRMGEAINTFWKMKHSGCHPTTSTFNTLIKGYGIVGKPEESQRVFDMMG 199
Query: 404 VNG-IKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADER 462
V G ++PN T + ++ A+ +++ + A +M++ GF PD N + S DE
Sbjct: 200 VEGSVRPNLTTYNILVKAWCDHRNLEEAWGVVGKMQAGGFEPDIVTYNTIASAYANNDET 259
Query: 463 NEANELL 469
A EL+
Sbjct: 260 WRAEELI 266
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 53/241 (21%), Positives = 117/241 (48%), Gaps = 6/241 (2%)
Query: 86 LRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGG 145
+ IQ+ +E + ++I Y ++G +A + + M G P+VV L++ +
Sbjct: 267 VEIQTRVRTSERTWGIIIGGYCREGRLEEALRCVQQMKDAGSVPNVVIFNTLLKGFLDAN 326
Query: 146 RYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQK 205
I M+ G +P +TY L F + VF +++ + ++PD +
Sbjct: 327 DMAAVNKILGLMKKFGIKPDIVTYSHQLNTFSSLGHMAKCMHVFDKMIE---AGIEPDPQ 383
Query: 206 MFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVS---KIYDQM 262
++ ++ + +A EKA L M+ G+ + VT+ +++S + ++ ++YD+M
Sbjct: 384 VYSILAKGFVRAQQPEKAEDLLLQMSHLGLCPNVVTFTTVISGWCSVADMESAMRVYDKM 443
Query: 263 QRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMV 322
++G+ P++ ++ LI Y + ++ +A V + M + GV+P Y ++ DA+ G+
Sbjct: 444 CKSGVYPNLRTFETLIWGYSEQKQPWKAEEVLQMMRETGVKPKQSTYCLIADAWKAVGLT 503
Query: 323 D 323
+
Sbjct: 504 E 504
>gi|28393724|gb|AAO42273.1| unknown protein [Arabidopsis thaliana]
Length = 642
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 105/401 (26%), Positives = 186/401 (46%), Gaps = 43/401 (10%)
Query: 128 APSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEE 187
+P+V+S L++A GR A ++F + + +P++ TY ++ + ++ + ++ E
Sbjct: 161 SPAVLSE--LVKALGRAKMVSKALSVFYQAKGRKCKPTSSTYNSVILMLMQEGQHEKVHE 218
Query: 188 VFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMS 247
V+ + +E PD + +I Y+K G + A +LF M + +Q + Y +L+
Sbjct: 219 VYTEMCNE--GDCFPDTITYSALISSYEKLGRNDSAIRLFDEMKDNCMQPTEKIYTTLLG 276
Query: 248 FETNYKEVSK---IYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRP 304
+V K ++++M+RAG P V +Y LI GKA R +EA +++ML G+ P
Sbjct: 277 IYFKVGKVEKALDLFEEMKRAGCSPTVYTYTELIKGLGKAGRVDEAYGFYKDMLRDGLTP 336
Query: 305 THKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSA-YVNASDMEGAEKF 363
N L++ G V++ VF M RC+P + SY T++ A + + + + +
Sbjct: 337 DVVFLNNLMNILGKVGRVEELTNVFSEMGMWRCTPTVVSYNTVIKALFESKAHVSEVSSW 396
Query: 364 FRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGK 423
F ++K D P+ TY LI GY K N +EK + + ++M G P + ++++A GK
Sbjct: 397 FDKMKADSVSPSEFTYSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGK 456
Query: 424 NKDFDS-----------------------------------AVVWYKEMESCGFPPDQKA 448
K +++ AV + EM++ G PD A
Sbjct: 457 AKRYEAADELFKELKENFGNVSSRVYAVMIKHFGKCGKLSEAVDLFNEMKNQGSGPDVYA 516
Query: 449 KNILLSLAKTADERNEANELLGNFNHPNNEPGINGLSISVD 489
N L+S A NEAN LL IN +I ++
Sbjct: 517 YNALMSGMVKAGMINEANSLLRKMEENGCRADINSHNIILN 557
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 92/399 (23%), Positives = 181/399 (45%), Gaps = 42/399 (10%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
LI++Y K G + A ++ M P+ +T L+ Y + G+ + A +F M+ +G
Sbjct: 239 LISSYEKLGRNDSAIRLFDEMKDNCMQPTEKIYTTLLGIYFKVGKVEKALDLFEEMKRAG 298
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
P+ TY ++K +A + EA + +L + L PD + ++ + K G E
Sbjct: 299 CSPTVYTYTELIKGLGKAGRVDEAYGFYKDML---RDGLTPDVVFLNNLMNILGKVGRVE 355
Query: 222 KARKLFALMAERGVQQSTVTYNSLMS--FET--NYKEVSKIYDQMQRAGLQPDVVSYALL 277
+ +F+ M + V+YN+++ FE+ + EVS +D+M+ + P +Y++L
Sbjct: 356 ELTNVFSEMGMWRCTPTVVSYNTVIKALFESKAHVSEVSSWFDKMKADSVSPSEFTYSIL 415
Query: 278 INAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDA---------------------- 315
I+ Y K R E+AL + EEM + G P AY L++A
Sbjct: 416 IDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGKAKRYEAADELFKELKENFG 475
Query: 316 -------------FAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEK 362
F G + +A +F M+ PD+ +Y ++S V A + A
Sbjct: 476 NVSSRVYAVMIKHFGKCGKLSEAVDLFNEMKNQGSGPDVYAYNALMSGMVKAGMINEANS 535
Query: 363 FFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYG 422
R+++++G ++ ++ ++ G+A+ + +E+++ ++ +GIKP+ + T++ +
Sbjct: 536 LLRKMEENGCRADINSHNIILNGFARTGVPRRAIEMFETIKHSGIKPDGVTYNTLLGCFA 595
Query: 423 KNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADE 461
F+ A +EM+ GF D + +L D
Sbjct: 596 HAGMFEEAARMMREMKDKGFEYDAITYSSILDAVGNVDH 634
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 81/342 (23%), Positives = 156/342 (45%), Gaps = 42/342 (12%)
Query: 168 TYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLF 227
TY +++ EA + E ++ + P + ++ +A KA +F
Sbjct: 128 TYMTLIRCLEEARLYGEMYRTIQEVVRNTYVSVSP--AVLSELVKALGRAKMVSKALSVF 185
Query: 228 ALMAERGVQQSTVTYNSLMSF---ETNYKEVSKIYDQMQRAG-LQPDVVSYALLINAYGK 283
R + ++ TYNS++ E +++V ++Y +M G PD ++Y+ LI++Y K
Sbjct: 186 YQAKGRKCKPTSSTYNSVILMLMQEGQHEKVHEVYTEMCNEGDCFPDTITYSALISSYEK 245
Query: 284 ARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICS 343
R + A+ +F+EM D ++PT K Y LL + G V++A +F+ M+R CSP + +
Sbjct: 246 LGRNDSAIRLFDEMKDNCMQPTEKIYTTLLGIYFKVGKVEKALDLFEEMKRAGCSPTVYT 305
Query: 344 YTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEI----- 398
YT ++ A ++ A F++ + +DG P+V+ L+ KV +E++ +
Sbjct: 306 YTELIKGLGKAGRVDEAYGFYKDMLRDGLTPDVVFLNNLMNILGKVGRVEELTNVFSEMG 365
Query: 399 -------------------------------YDKMRVNGIKPNQTIFTTIMDAYGKNKDF 427
+DKM+ + + P++ ++ ++D Y K
Sbjct: 366 MWRCTPTVVSYNTVIKALFESKAHVSEVSSWFDKMKADSVSPSEFTYSILIDGYCKTNRV 425
Query: 428 DSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELL 469
+ A++ +EM+ GFPP A L++ A A+EL
Sbjct: 426 EKALLLLEEMDEKGFPPCPAAYCSLINALGKAKRYEAADELF 467
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 64/275 (23%), Positives = 127/275 (46%), Gaps = 43/275 (15%)
Query: 88 IQSWWDF--------NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALME 139
+ SW+D +E + +LI Y K KA +L M++KG+ P ++ +L+
Sbjct: 393 VSSWFDKMKADSVSPSEFTYSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLIN 452
Query: 140 AYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSP 199
A G+ RY+ A+ +F+ ++ + S+ Y +++K F + K EA ++F + ++
Sbjct: 453 ALGKAKRYEAADELFKELKENFGNVSSRVYAVMIKHFGKCGKLSEAVDLFNEMKNQGSG- 511
Query: 200 LKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSKIY 259
PD ++ ++ KAG +A NSL+
Sbjct: 512 --PDVYAYNALMSGMVKAGMINEA-------------------NSLLR------------ 538
Query: 260 DQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAIS 319
+M+ G + D+ S+ +++N + + A+ +FE + +G++P YN LL FA +
Sbjct: 539 -KMEENGCRADINSHNIILNGFARTGVPRRAIEMFETIKHSGIKPDGVTYNTLLGCFAHA 597
Query: 320 GMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNA 354
GM ++A + + M+ D +Y+++L A N
Sbjct: 598 GMFEEAARMMREMKDKGFEYDAITYSSILDAVGNV 632
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 62/235 (26%), Positives = 108/235 (45%), Gaps = 19/235 (8%)
Query: 233 RGVQQSTVTYNSLMSFETNYKEVSKIYDQMQR----------AGLQPDVVSYALLINAYG 282
R Q TY +L+ E +++Y +M R + P V+S L+ A G
Sbjct: 120 RNFQHDCSTYMTLI----RCLEEARLYGEMYRTIQEVVRNTYVSVSPAVLSE--LVKALG 173
Query: 283 KARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFK--CMRRDRCSPD 340
+A+ +AL+VF + +PT YN ++ G ++ V+ C D C PD
Sbjct: 174 RAKMVSKALSVFYQAKGRKCKPTSSTYNSVILMLMQEGQHEKVHEVYTEMCNEGD-CFPD 232
Query: 341 ICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYD 400
+Y+ ++S+Y + A + F +K + P Y TL+ Y KV +EK +++++
Sbjct: 233 TITYSALISSYEKLGRNDSAIRLFDEMKDNCMQPTEKIYTTLLGIYFKVGKVEKALDLFE 292
Query: 401 KMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSL 455
+M+ G P +T ++ GK D A +YK+M G PD N L+++
Sbjct: 293 EMKRAGCSPTVYTYTELIKGLGKAGRVDEAYGFYKDMLRDGLTPDVVFLNNLMNI 347
>gi|356516744|ref|XP_003527053.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g18900-like [Glycine max]
Length = 882
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 93/340 (27%), Positives = 163/340 (47%), Gaps = 6/340 (1%)
Query: 70 LKQLKKWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAP 129
LKQL+ +V WL+ Q + + + ++ G+ +F K+L M K G P
Sbjct: 360 LKQLQDHSVALSFFYWLKRQPGFWHDGHTYTTMVGILGRAREFGAINKLLEQMVKDGCQP 419
Query: 130 SVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVF 189
+VV++ L+ +YGR A +F +MQ G P +TY ++ + +A A ++
Sbjct: 420 NVVTYNRLIHSYGRANYLGEALNVFNQMQEMGCEPDRVTYCTLIDIHAKAGFLDVAMSMY 479
Query: 190 MTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFE 249
+ ++ L PD + +MI K+G A +LF M ++G + VTYN L++ +
Sbjct: 480 ERM---QEVGLSPDTFTYSVMINCLGKSGNLSAAHRLFCEMVDQGCVPNIVTYNILIALQ 536
Query: 250 T---NYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTH 306
NY+ K+Y MQ AG +PD V+Y++++ G EEA AVF EM P
Sbjct: 537 AKARNYQTALKLYRDMQNAGFKPDKVTYSIVMEVLGYCGYLEEAEAVFFEMKQNNWVPDE 596
Query: 307 KAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRR 366
Y +L+D + +G V++A + M R P++ + ++LSA++ + A +
Sbjct: 597 PVYGLLIDLWGKAGNVEKAWEWYHAMLRAGLLPNVPTCNSLLSAFLRVHRLPDAYNLLQN 656
Query: 367 LKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNG 406
+ G P++ TY L+ + + M + M V+G
Sbjct: 657 MVTLGLNPSLQTYTLLLSCCTEAQSPYDMGFCCELMAVSG 696
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 74/273 (27%), Positives = 134/273 (49%), Gaps = 3/273 (1%)
Query: 203 DQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSF--ETNY-KEVSKIY 259
D + M+ + +A + KL M + G Q + VTYN L+ NY E ++
Sbjct: 385 DGHTYTTMVGILGRAREFGAINKLLEQMVKDGCQPNVVTYNRLIHSYGRANYLGEALNVF 444
Query: 260 DQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAIS 319
+QMQ G +PD V+Y LI+ + KA + A++++E M + G+ P Y+++++ S
Sbjct: 445 NQMQEMGCEPDRVTYCTLIDIHAKAGFLDVAMSMYERMQEVGLSPDTFTYSVMINCLGKS 504
Query: 320 GMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITY 379
G + A +F M C P+I +Y +++ A + + A K +R ++ GF P+ +TY
Sbjct: 505 GNLSAAHRLFCEMVDQGCVPNIVTYNILIALQAKARNYQTALKLYRDMQNAGFKPDKVTY 564
Query: 380 GTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMES 439
+++ LE+ ++ +M+ N P++ ++ ++D +GK + + A WY M
Sbjct: 565 SIVMEVLGYCGYLEEAEAVFFEMKQNNWVPDEPVYGLLIDLWGKAGNVEKAWEWYHAMLR 624
Query: 440 CGFPPDQKAKNILLSLAKTADERNEANELLGNF 472
G P+ N LLS +A LL N
Sbjct: 625 AGLLPNVPTCNSLLSAFLRVHRLPDAYNLLQNM 657
Score = 121 bits (304), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 83/314 (26%), Positives = 146/314 (46%), Gaps = 9/314 (2%)
Query: 168 TYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLF 227
TY ++ + A +F ++ ++ K +P+ ++ +I+ Y +A +A +F
Sbjct: 388 TYTTMVGILGRAREFGAINKLLEQMV---KDGCQPNVVTYNRLIHSYGRANYLGEALNVF 444
Query: 228 ALMAERGVQQSTVTYNSLMSF--ETNYKEVS-KIYDQMQRAGLQPDVVSYALLINAYGKA 284
M E G + VTY +L+ + + +V+ +Y++MQ GL PD +Y+++IN GK+
Sbjct: 445 NQMQEMGCEPDRVTYCTLIDIHAKAGFLDVAMSMYERMQEVGLSPDTFTYSVMINCLGKS 504
Query: 285 RREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSY 344
A +F EM+D G P YNIL+ A + A +++ M+ PD +Y
Sbjct: 505 GNLSAAHRLFCEMVDQGCVPNIVTYNILIALQAKARNYQTALKLYRDMQNAGFKPDKVTY 564
Query: 345 TTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRV 404
+ ++ +E AE F +KQ+ +VP+ YG LI + K N+EK E Y M
Sbjct: 565 SIVMEVLGYCGYLEEAEAVFFEMKQNNWVPDEPVYGLLIDLWGKAGNVEKAWEWYHAMLR 624
Query: 405 NGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNE 464
G+ PN +++ A+ + A + M + G P + +LLS A +
Sbjct: 625 AGLLPNVPTCNSLLSAFLRVHRLPDAYNLLQNMVTLGLNPSLQTYTLLLSCCTEAQSPYD 684
Query: 465 ---ANELLGNFNHP 475
EL+ HP
Sbjct: 685 MGFCCELMAVSGHP 698
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 48/201 (23%), Positives = 98/201 (48%)
Query: 255 VSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLD 314
+S Y ++ G D +Y ++ G+AR + E+M+ G +P YN L+
Sbjct: 370 LSFFYWLKRQPGFWHDGHTYTTMVGILGRAREFGAINKLLEQMVKDGCQPNVVTYNRLIH 429
Query: 315 AFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVP 374
++ + + +A VF M+ C PD +Y T++ + A ++ A + R+++ G P
Sbjct: 430 SYGRANYLGEALNVFNQMQEMGCEPDRVTYCTLIDIHAKAGFLDVAMSMYERMQEVGLSP 489
Query: 375 NVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWY 434
+ TY +I K NL ++ +M G PN + ++ K +++ +A+ Y
Sbjct: 490 DTFTYSVMINCLGKSGNLSAAHRLFCEMVDQGCVPNIVTYNILIALQAKARNYQTALKLY 549
Query: 435 KEMESCGFPPDQKAKNILLSL 455
++M++ GF PD+ +I++ +
Sbjct: 550 RDMQNAGFKPDKVTYSIVMEV 570
>gi|449462136|ref|XP_004148797.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g48810-like [Cucumis sativus]
Length = 660
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 95/358 (26%), Positives = 174/358 (48%), Gaps = 11/358 (3%)
Query: 99 FLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQ 158
F+ +I Y + G +A K+ + + G P+V + L++A +++ ++ M+
Sbjct: 112 FICIINGYKRVGSAEQALKMFYRIGEFGCKPTVRIYNHLLDALLSENKFQMINPLYTNMK 171
Query: 159 SSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAG 218
G P+ TY I+LK + ++ A ++F+ + + P PD + M+ KAG
Sbjct: 172 KDGLIPNVFTYNILLKALCKNDRVDAAHKLFVE-MSNKGCP--PDAVTYTTMVSSLCKAG 228
Query: 219 GYEKARKLFALMAERGVQQSTVTYNSL---MSFETNYKEVSKIYDQMQRAGLQPDVVSYA 275
+ AR+L A R + S YN+L M E + K+ +M G+ P+VVSY+
Sbjct: 229 KIDDAREL----AGR-FKPSVPVYNALIDGMCKEGRIEVAIKLLGEMMDNGVDPNVVSYS 283
Query: 276 LLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRD 335
+IN+ + E A A+F +M G + L+ + G + +A ++K M +D
Sbjct: 284 CIINSLCVSGNVELAFALFAQMFLRGCDANIHTFTPLIKGCFMRGKLYEALDLWKLMIQD 343
Query: 336 RCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKM 395
C P++ +Y T++ + +E A + ++++ G +PNV TY LI G+AK +L
Sbjct: 344 GCEPNVVAYNTLIHGLCSNGSLEEALQVCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGA 403
Query: 396 MEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILL 453
E +++M +G +PN +T ++D KN FD A ++M G P+ N +
Sbjct: 404 SETWNRMISHGCRPNVVTYTCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTMTFNTFI 461
Score = 139 bits (349), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 102/399 (25%), Positives = 173/399 (43%), Gaps = 30/399 (7%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
L+ A + F + + M K G P+V ++ L++A + R A +F M + G
Sbjct: 150 LLDALLSENKFQMINPLYTNMKKDGLIPNVFTYNILLKALCKNDRVDAAHKLFVEMSNKG 209
Query: 162 PRPSALTYQIILKLFVEANKFKEAEE--------------------------VFMTLLDE 195
P A+TY ++ +A K +A E V + LL E
Sbjct: 210 CPPDAVTYTTMVSSLCKAGKIDDARELAGRFKPSVPVYNALIDGMCKEGRIEVAIKLLGE 269
Query: 196 EK-SPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMS---FETN 251
+ + P+ + +I +G E A LFA M RG + T+ L+
Sbjct: 270 MMDNGVDPNVVSYSCIINSLCVSGNVELAFALFAQMFLRGCDANIHTFTPLIKGCFMRGK 329
Query: 252 YKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNI 311
E ++ M + G +P+VV+Y LI+ EEAL V ++M +G P Y+I
Sbjct: 330 LYEALDLWKLMIQDGCEPNVVAYNTLIHGLCSNGSLEEALQVCDQMQRSGCLPNVTTYSI 389
Query: 312 LLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDG 371
L+D FA SG + A + M C P++ +YT M+ S + A ++ +G
Sbjct: 390 LIDGFAKSGDLVGASETWNRMISHGCRPNVVTYTCMVDVLCKNSMFDQANSLVEKMTLEG 449
Query: 372 FVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAV 431
PN +T+ T IKG +E M++ ++M+ +G PN T + ++DA + ++ A
Sbjct: 450 CTPNTMTFNTFIKGLCGNGRVEWAMKLLERMQGHGCLPNITTYNELLDALFRMNKYEEAF 509
Query: 432 VWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLG 470
++E+E+ P+ N +L A EA +L G
Sbjct: 510 GLFQEIEARNLQPNLVTYNTVLYGFSRAGMMGEALQLFG 548
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 80/334 (23%), Positives = 154/334 (46%), Gaps = 14/334 (4%)
Query: 127 YAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIIL-KLFVEAN---KF 182
+ PSV + AL++ + GR + A + M +G P+ ++Y I+ L V N F
Sbjct: 240 FKPSVPVYNALIDGMCKEGRIEVAIKLLGEMMDNGVDPNVVSYSCIINSLCVSGNVELAF 299
Query: 183 KEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTY 242
++F+ D P K M +Y+ A L+ LM + G + + V Y
Sbjct: 300 ALFAQMFLRGCDANIHTFTPLIKGCFMRGKLYE-------ALDLWKLMIQDGCEPNVVAY 352
Query: 243 NSL---MSFETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLD 299
N+L + + +E ++ DQMQR+G P+V +Y++LI+ + K+ A + M+
Sbjct: 353 NTLIHGLCSNGSLEEALQVCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGASETWNRMIS 412
Query: 300 AGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEG 359
G RP Y ++D + M DQA ++ + M + C+P+ ++ T + +E
Sbjct: 413 HGCRPNVVTYTCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTMTFNTFIKGLCGNGRVEW 472
Query: 360 AEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMD 419
A K R++ G +PN+ TY L+ ++N E+ ++ ++ ++PN + T++
Sbjct: 473 AMKLLERMQGHGCLPNITTYNELLDALFRMNKYEEAFGLFQEIEARNLQPNLVTYNTVLY 532
Query: 420 AYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILL 453
+ + A+ + + G PD N ++
Sbjct: 533 GFSRAGMMGEALQLFGKALVRGTAPDSITYNTMI 566
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 89/342 (26%), Positives = 160/342 (46%), Gaps = 14/342 (4%)
Query: 93 DFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEA 152
D N F LI +G +A + M + G P+VV++ L+ G + A
Sbjct: 311 DANIHTFTPLIKGCFMRGKLYEALDLWKLMIQDGCEPNVVAYNTLIHGLCSNGSLEEALQ 370
Query: 153 IFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIY 212
+ +MQ SG P+ TY I++ F ++ A E + ++ +P+ + M+
Sbjct: 371 VCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGASETWNRMISHG---CRPNVVTYTCMVD 427
Query: 213 MYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVS---KIYDQMQRAGLQP 269
+ K +++A L M G +T+T+N+ + V K+ ++MQ G P
Sbjct: 428 VLCKNSMFDQANSLVEKMTLEGCTPNTMTFNTFIKGLCGNGRVEWAMKLLERMQGHGCLP 487
Query: 270 DVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVF 329
++ +Y L++A + + EEA +F+E+ ++P YN +L F+ +GM+ +A +F
Sbjct: 488 NITTYNELLDALFRMNKYEEAFGLFQEIEARNLQPNLVTYNTVLYGFSRAGMMGEALQLF 547
Query: 330 -KCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQ-DGFVPNVITYGTLIKGYA 387
K + R +PD +Y TM+ AY ++ A + R+ + P++ITY +LI G
Sbjct: 548 GKALVRGT-APDSITYNTMIHAYCKQGKVKIAAQLVERVSSMKEWHPDIITYTSLIWGAC 606
Query: 388 KVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDS 429
N+E+ M DK GI PN + ++ + FDS
Sbjct: 607 NWMNIEEAMAFLDKAINQGICPNFATWNALVRCF-----FDS 643
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 81/307 (26%), Positives = 140/307 (45%), Gaps = 11/307 (3%)
Query: 86 LRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGG 145
L IQ + N + + LI G +A +V M + G P+V +++ L++ + + G
Sbjct: 339 LMIQDGCEPNVVAYNTLIHGLCSNGSLEEALQVCDQMQRSGCLPNVTTYSILIDGFAKSG 398
Query: 146 RYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVF--MTLLDEEKSPLKPD 203
A + RM S G RP+ +TY ++ + + + F +A + MTL P+
Sbjct: 399 DLVGASETWNRMISHGCRPNVVTYTCMVDVLCKNSMFDQANSLVEKMTL-----EGCTPN 453
Query: 204 QKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMS--FETN-YKEVSKIYD 260
F+ I G E A KL M G + TYN L+ F N Y+E ++
Sbjct: 454 TMTFNTFIKGLCGNGRVEWAMKLLERMQGHGCLPNITTYNELLDALFRMNKYEEAFGLFQ 513
Query: 261 QMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISG 320
+++ LQP++V+Y ++ + +A EAL +F + L G P YN ++ A+ G
Sbjct: 514 EIEARNLQPNLVTYNTVLYGFSRAGMMGEALQLFGKALVRGTAPDSITYNTMIHAYCKQG 573
Query: 321 MVD-QARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITY 379
V A+ V + PDI +YT+++ N ++E A F + G PN T+
Sbjct: 574 KVKIAAQLVERVSSMKEWHPDIITYTSLIWGACNWMNIEEAMAFLDKAINQGICPNFATW 633
Query: 380 GTLIKGY 386
L++ +
Sbjct: 634 NALVRCF 640
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 71/288 (24%), Positives = 129/288 (44%), Gaps = 10/288 (3%)
Query: 206 MFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSF---ETNYKEVSKIYDQM 262
+F +I YK+ G E+A K+F + E G + + YN L+ E ++ ++ +Y M
Sbjct: 111 LFICIINGYKRVGSAEQALKMFYRIGEFGCKPTVRIYNHLLDALLSENKFQMINPLYTNM 170
Query: 263 QRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMV 322
++ GL P+V +Y +L+ A K R + A +F EM + G P Y ++ + +G +
Sbjct: 171 KKDGLIPNVFTYNILLKALCKNDRVDAAHKLFVEMSNKGCPPDAVTYTTMVSSLCKAGKI 230
Query: 323 DQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTL 382
D AR + R P + Y ++ +E A K + +G PNV++Y +
Sbjct: 231 DDAREL-----AGRFKPSVPVYNALIDGMCKEGRIEVAIKLLGEMMDNGVDPNVVSYSCI 285
Query: 383 IKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMD-AYGKNKDFDSAVVWYKEMESCG 441
I N+E ++ +M + G N FT ++ + + K +++ +W K M G
Sbjct: 286 INSLCVSGNVELAFALFAQMFLRGCDANIHTFTPLIKGCFMRGKLYEALDLW-KLMIQDG 344
Query: 442 FPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGINGLSISVD 489
P+ A N L+ + EA ++ P + SI +D
Sbjct: 345 CEPNVVAYNTLIHGLCSNGSLEEALQVCDQMQRSGCLPNVTTYSILID 392
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 75/367 (20%), Positives = 160/367 (43%), Gaps = 11/367 (2%)
Query: 93 DFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEA 152
D N + + +I + G+ A + + M +G ++ + T L++ G+ A
Sbjct: 276 DPNVVSYSCIINSLCVSGNVELAFALFAQMFLRGCDANIHTFTPLIKGCFMRGKLYEALD 335
Query: 153 IFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIY 212
+++ M G P+ + Y ++ +EA +V + ++S P+ + ++I
Sbjct: 336 LWKLMIQDGCEPNVVAYNTLIHGLCSNGSLEEALQVCDQM---QRSGCLPNVTTYSILID 392
Query: 213 MYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSF---ETNYKEVSKIYDQMQRAGLQP 269
+ K+G A + + M G + + VTY ++ + + + + + ++M G P
Sbjct: 393 GFAKSGDLVGASETWNRMISHGCRPNVVTYTCMVDVLCKNSMFDQANSLVEKMTLEGCTP 452
Query: 270 DVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVF 329
+ +++ I R E A+ + E M G P YN LLDA ++A +F
Sbjct: 453 NTMTFNTFIKGLCGNGRVEWAMKLLERMQGHGCLPNITTYNELLDALFRMNKYEEAFGLF 512
Query: 330 KCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKV 389
+ + P++ +Y T+L + A M A + F + G P+ ITY T+I Y K
Sbjct: 513 QEIEARNLQPNLVTYNTVLYGFSRAGMMGEALQLFGKALVRGTAPDSITYNTMIHAYCKQ 572
Query: 390 NNLEKMMEIYDKMRVNGIK---PNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQ 446
++ ++ + RV+ +K P+ +T+++ + + A+ + + + G P+
Sbjct: 573 GKVKIAAQLVE--RVSSMKEWHPDIITYTSLIWGACNWMNIEEAMAFLDKAINQGICPNF 630
Query: 447 KAKNILL 453
N L+
Sbjct: 631 ATWNALV 637
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/230 (22%), Positives = 98/230 (42%), Gaps = 8/230 (3%)
Query: 228 ALMAERGVQQSTVTYNSL---MSFETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKA 284
A+ Q + TY + + E V I QM+ G+ + +IN Y +
Sbjct: 63 AIANSNAFQHTASTYRVMIERLGRECEMDMVQYILQQMKMDGINCCEDLFICIINGYKRV 122
Query: 285 RREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSY 344
E+AL +F + + G +PT + YN LLDA ++ M++D P++ +Y
Sbjct: 123 GSAEQALKMFYRIGEFGCKPTVRIYNHLLDALLSENKFQMINPLYTNMKKDGLIPNVFTY 182
Query: 345 TTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRV 404
+L A ++ A K F + G P+ +TY T++ K ++ E+ +
Sbjct: 183 NILLKALCKNDRVDAAHKLFVEMSNKGCPPDAVTYTTMVSSLCKAGKIDDARELAGR--- 239
Query: 405 NGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLS 454
KP+ ++ ++D K + A+ EM G P+ + + +++
Sbjct: 240 --FKPSVPVYNALIDGMCKEGRIEVAIKLLGEMMDNGVDPNVVSYSCIIN 287
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 45/191 (23%), Positives = 83/191 (43%), Gaps = 5/191 (2%)
Query: 285 RREEEALAVFEEMLDA-GVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRD--RCSPDI 341
R L F + ++ + T Y ++++ +D + + + M+ D C D+
Sbjct: 52 RNLSSVLGFFSAIANSNAFQHTASTYRVMIERLGRECEMDMVQYILQQMKMDGINCCEDL 111
Query: 342 CSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDK 401
+ +++ Y E A K F R+ + G P V Y L+ N + + +Y
Sbjct: 112 --FICIINGYKRVGSAEQALKMFYRIGEFGCKPTVRIYNHLLDALLSENKFQMINPLYTN 169
Query: 402 MRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADE 461
M+ +G+ PN + ++ A KN D+A + EM + G PPD ++S A +
Sbjct: 170 MKKDGLIPNVFTYNILLKALCKNDRVDAAHKLFVEMSNKGCPPDAVTYTTMVSSLCKAGK 229
Query: 462 RNEANELLGNF 472
++A EL G F
Sbjct: 230 IDDARELAGRF 240
>gi|125542535|gb|EAY88674.1| hypothetical protein OsI_10149 [Oryza sativa Indica Group]
Length = 333
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 85/326 (26%), Positives = 165/326 (50%), Gaps = 8/326 (2%)
Query: 126 GYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEA 185
G P V +T ++ + R G +A + M G P +TY +L + + +A
Sbjct: 11 GLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDA 70
Query: 186 EEVFMTLLDEEKS-PLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNS 244
E LL+E + + PD F +I+ Y G +KA +LF M + ++ VTYN+
Sbjct: 71 E----GLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNT 126
Query: 245 L---MSFETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAG 301
L M + + + + ++D M + P+ V+Y++LI+++ + + E+A +EM++ G
Sbjct: 127 LIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKG 186
Query: 302 VRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAE 361
+ P YN ++ + SG V + + + M ++ SPD+ +Y T++ Y+ M A
Sbjct: 187 ILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMHDAF 246
Query: 362 KFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAY 421
K ++++ P+V+TY LI G++ N+++ I++KM GI+P++ + ++++ +
Sbjct: 247 KLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAKGIEPDRYTYMSMINGH 306
Query: 422 GKNKDFDSAVVWYKEMESCGFPPDQK 447
+ A + EM GF PD K
Sbjct: 307 VTAGNSKEAFQLHDEMLQRGFAPDDK 332
Score = 118 bits (296), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 69/258 (26%), Positives = 126/258 (48%), Gaps = 3/258 (1%)
Query: 200 LKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSF---ETNYKEVS 256
L PD ++ M+I + +AG A ++ M G VTYN+L++ E +
Sbjct: 12 LVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAE 71
Query: 257 KIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAF 316
+ ++M+ G+ PD+ ++ LI+ Y + ++AL +F+ ML+ +RP YN L+D
Sbjct: 72 GLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGM 131
Query: 317 AISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNV 376
G +D+A ++ M P+ +Y+ ++ ++ +E A F + G +PN+
Sbjct: 132 CRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGILPNI 191
Query: 377 ITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKE 436
+TY ++IKGY + N+ K + KM VN + P+ + T++ Y K A
Sbjct: 192 MTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMHDAFKLLNM 251
Query: 437 MESCGFPPDQKAKNILLS 454
ME PD N+L++
Sbjct: 252 MEKEKVQPDVVTYNMLIN 269
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 72/320 (22%), Positives = 146/320 (45%), Gaps = 6/320 (1%)
Query: 152 AIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMI 211
A R M+ G P + Y +++ F A +A V ++ PD ++ ++
Sbjct: 2 AYLREMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMV---GCGCLPDVVTYNTLL 58
Query: 212 YMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLM---SFETNYKEVSKIYDQMQRAGLQ 268
K A L M ERGV T+ +L+ E + +++D M L+
Sbjct: 59 NGLCKERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLR 118
Query: 269 PDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTV 328
PD+V+Y LI+ + ++A ++++M + P H Y+IL+D+ G V+ A
Sbjct: 119 PDIVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGF 178
Query: 329 FKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAK 388
M P+I +Y +++ Y + ++ +KF +++ + P++ITY TLI GY K
Sbjct: 179 LDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIK 238
Query: 389 VNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKA 448
+ + ++ + M ++P+ + +++ + + + A +++M + G PD+
Sbjct: 239 EDKMHDAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAKGIEPDRYT 298
Query: 449 KNILLSLAKTADERNEANEL 468
+++ TA EA +L
Sbjct: 299 YMSMINGHVTAGNSKEAFQL 318
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 63/237 (26%), Positives = 105/237 (44%), Gaps = 7/237 (2%)
Query: 257 KIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAF 316
++ D+M G PDVV+Y L+N K RR +A + EM + GV P + L+ +
Sbjct: 37 RVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGY 96
Query: 317 AISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNV 376
I G +D+A +F M R PDI +Y T++ D++ A + + PN
Sbjct: 97 CIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNH 156
Query: 377 ITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKE 436
+TY LI + + +E D+M GI PN + +I+ Y ++ + + ++
Sbjct: 157 VTYSILIDSHCEKGQVEDAFGFLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQK 216
Query: 437 MESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPG-------INGLSI 486
M PD N L+ D+ ++A +LL +P ING S+
Sbjct: 217 MMVNKVSPDLITYNTLIHGYIKEDKMHDAFKLLNMMEKEKVQPDVVTYNMLINGFSV 273
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 127/277 (45%), Gaps = 6/277 (2%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
L+ K+ AE +L+ M ++G P + + T L+ Y G+ A +F M +
Sbjct: 57 LLNGLCKERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQR 116
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
RP +TY ++ +A +++ D + P+ + ++I + + G E
Sbjct: 117 LRPDIVTYNTLIDGMCRQGDLDKANDLWD---DMHSREIFPNHVTYSILIDSHCEKGQVE 173
Query: 222 KARKLFALMAERGVQQSTVTYNSLMSFETNYKEVS---KIYDQMQRAGLQPDVVSYALLI 278
A M +G+ + +TYNS++ VS K +M + PD+++Y LI
Sbjct: 174 DAFGFLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLI 233
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCS 338
+ Y K + +A + M V+P YN+L++ F++ G V +A +F+ M
Sbjct: 234 HGYIKEDKMHDAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAKGIE 293
Query: 339 PDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPN 375
PD +Y +M++ +V A + + A + + Q GF P+
Sbjct: 294 PDRYTYMSMINGHVTAGNSKEAFQLHDEMLQRGFAPD 330
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 104/209 (49%), Gaps = 6/209 (2%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
LI +QGD +KA + M+ + P+ V+++ L++++ G+ ++A M + G
Sbjct: 127 LIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKG 186
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
P+ +TY I+K + + + ++ ++ + S PD ++ +I+ Y K
Sbjct: 187 ILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVS---PDLITYNTLIHGYIKEDKMH 243
Query: 222 KARKLFALMAERGVQQSTVTYNSLM---SFETNYKEVSKIYDQMQRAGLQPDVVSYALLI 278
A KL +M + VQ VTYN L+ S N +E I+++M G++PD +Y +I
Sbjct: 244 DAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAKGIEPDRYTYMSMI 303
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHK 307
N + A +EA + +EML G P K
Sbjct: 304 NGHVTAGNSKEAFQLHDEMLQRGFAPDDK 332
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 78/163 (47%)
Query: 291 LAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSA 350
+A EM G+ P Y +++ F +G++ A V M C PD+ +Y T+L+
Sbjct: 1 MAYLREMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNG 60
Query: 351 YVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPN 410
+ AE +++ G P++ T+ TLI GY L+K ++++D M ++P+
Sbjct: 61 LCKERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPD 120
Query: 411 QTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILL 453
+ T++D + D D A + +M S P+ +IL+
Sbjct: 121 IVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILI 163
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/179 (24%), Positives = 91/179 (50%), Gaps = 6/179 (3%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + + +LI ++ ++G A L M KG P+++++ ++++ Y R G +
Sbjct: 155 NHVTYSILIDSHCEKGQVEDAFGFLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFL 214
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
++M + P +TY ++ +++ +K +A F L EK ++PD ++M+I +
Sbjct: 215 QKMMVNKVSPDLITYNTLIHGYIKEDKMHDA---FKLLNMMEKEKVQPDVVTYNMLINGF 271
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFET---NYKEVSKIYDQMQRAGLQPD 270
G ++A +F M +G++ TY S+++ N KE +++D+M + G PD
Sbjct: 272 SVHGNVQEAGWIFEKMCAKGIEPDRYTYMSMINGHVTAGNSKEAFQLHDEMLQRGFAPD 330
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 70/163 (42%), Gaps = 3/163 (1%)
Query: 332 MRRDRC---SPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAK 388
+R RC PD YT ++ + A M A + + G +P+V+TY TL+ G K
Sbjct: 4 LREMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCK 63
Query: 389 VNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKA 448
L + ++MR G+ P+ FTT++ Y D A+ + M + PD
Sbjct: 64 ERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVT 123
Query: 449 KNILLSLAKTADERNEANELLGNFNHPNNEPGINGLSISVDEE 491
N L+ + ++AN+L + + P SI +D
Sbjct: 124 YNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSH 166
>gi|125527955|gb|EAY76069.1| hypothetical protein OsI_03997 [Oryza sativa Indica Group]
Length = 684
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 95/400 (23%), Positives = 188/400 (47%), Gaps = 4/400 (1%)
Query: 70 LKQLKKWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAP 129
L K+W V E+ + ++ NE+ F ML+ + + G +A +VL M+ G A
Sbjct: 260 LCAAKRWEDVEELFAEMMEKNCMP-NEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAA 318
Query: 130 SVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVF 189
+ ++ + GR +A M S G P ++Y +LK A ++++A+E+
Sbjct: 319 NTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELL 378
Query: 190 MTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFE 249
++ + P++ F+ I + + G E+A L M+E G + + VTYN+L++
Sbjct: 379 KEMV---RKNCPPNEVTFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGF 435
Query: 250 TNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAY 309
V + +P+ ++Y L+ A R + A + EML P +
Sbjct: 436 CVQGRVDSALELFYSMPCKPNTITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTF 495
Query: 310 NILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQ 369
N+L+ F G++D+A + + M C+P++ +Y T+L N + E A + L
Sbjct: 496 NVLVSFFCQKGLMDEAIELVEQMMEHGCTPNLITYNTLLDGITNDCNSEEALELLHGLVS 555
Query: 370 DGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDS 429
+G P+++TY ++I ++ + +E+ ++++ ++ G++P I+ I+ A K + D
Sbjct: 556 NGVSPDIVTYSSIIGVLSREDRVEEAIKMFHIVQDLGMRPKAVIYNKILLALCKRCNTDG 615
Query: 430 AVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELL 469
A+ ++ M S G P++ L+ D E +LL
Sbjct: 616 AIDFFAYMVSNGCMPNELTYITLIEGLANEDFLKETRDLL 655
Score = 145 bits (365), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 91/407 (22%), Positives = 179/407 (43%), Gaps = 44/407 (10%)
Query: 97 MDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRR 156
+ + +L+ A K F +A +VL M KG P++V++ ++ R GR +A R
Sbjct: 181 VTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREFLNR 240
Query: 157 MQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKK 216
+ S G +P ++Y +LK A ++++ EE+F ++++ P++ F M++ + +
Sbjct: 241 LSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKN---CMPNEVTFDMLVRFFCR 297
Query: 217 AGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSKIY---DQMQRAGLQPDVVS 273
G E+A ++ M+ G +T N +++ V + + M G PD +S
Sbjct: 298 GGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDTIS 357
Query: 274 YALLINAYGKARREEEALAVFEEMLDAGVRPTH--------------------------- 306
Y ++ +A R E+A + +EM+ P
Sbjct: 358 YTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQATMLIEQMS 417
Query: 307 --------KAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDME 358
YN L++ F + G VD A +F M C P+ +YTT+L+ NA ++
Sbjct: 418 EHGCEVNIVTYNALVNGFCVQGRVDSALELFYSM---PCKPNTITYTTLLTGLCNAERLD 474
Query: 359 GAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIM 418
A + + Q PNV+T+ L+ + + +++ +E+ ++M +G PN + T++
Sbjct: 475 AAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQMMEHGCTPNLITYNTLL 534
Query: 419 DAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEA 465
D + + + A+ + S G PD + ++ + D EA
Sbjct: 535 DGITNDCNSEEALELLHGLVSNGVSPDIVTYSSIIGVLSREDRVEEA 581
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 99/428 (23%), Positives = 180/428 (42%), Gaps = 51/428 (11%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
LI ++G + A +VL + G A V ++ L+ Y R G+ A RR+ +S
Sbjct: 84 LIRNLCRRGRTSDAARVLRAAERSGTAVDVFAYNTLVAGYCRYGQLDAA----RRLIASM 139
Query: 162 P-RPSALTYQIILKLFVEANKFKEAEEVFMTLLDEE-KSPLKPDQKMFHMMIYMYKKAGG 219
P P A TY I++ + + EA ++LLD+ +P + +++ K+ G
Sbjct: 140 PVAPDAYTYTPIIRGLCDRGRVGEA----LSLLDDMLHRGCQPSVVTYTVLLEAVCKSTG 195
Query: 220 YEKARKLFALMAERGVQQSTVTYNSL---MSFETNYKEVSKIYDQMQRAGLQPDVVSYAL 276
+ +A ++ M +G + VTYN + M E + + +++ G QPD VSY
Sbjct: 196 FGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREFLNRLSSYGFQPDTVSYTT 255
Query: 277 LINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQA----------- 325
++ A+R E+ +F EM++ P +++L+ F GMV++A
Sbjct: 256 VLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHG 315
Query: 326 ------------RTVFKCMRRD------------RCSPDICSYTTMLSAYVNASDMEGAE 361
T+ K R D CSPD SYTT+L A E A+
Sbjct: 316 CAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAK 375
Query: 362 KFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAY 421
+ + + + PN +T+ T I + +E+ + ++M +G + N + +++ +
Sbjct: 376 ELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGF 435
Query: 422 GKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGI 481
DSA+ + M P+ LL+ A+ + A ELL + P +
Sbjct: 436 CVQGRVDSALELFYSMPC---KPNTITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNV 492
Query: 482 NGLSISVD 489
++ V
Sbjct: 493 VTFNVLVS 500
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 89/375 (23%), Positives = 150/375 (40%), Gaps = 41/375 (10%)
Query: 111 DFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQ 170
D +A +++ +G AP V T L+ R GR +A + R + SG Y
Sbjct: 58 DLAEAARLVDRATSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAERSGTAVDVFAYN 117
Query: 171 IILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALM 230
++ + + A + ++ P+ PD + +I R L
Sbjct: 118 TLVAGYCRYGQLDAARRLIASM------PVAPDAYTYTPII------------RGL---- 155
Query: 231 AERGVQQSTVTYNSLMSFETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEA 290
+RG E + D M G QP VV+Y +L+ A K+ +A
Sbjct: 156 CDRG----------------RVGEALSLLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQA 199
Query: 291 LAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSA 350
+ V +EM G P YN++++ G VD AR + PD SYTT+L
Sbjct: 200 MEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKG 259
Query: 351 YVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPN 410
A E E+ F + + +PN +T+ L++ + + +E+ +++ ++M +G N
Sbjct: 260 LCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAAN 319
Query: 411 QTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLG 470
T+ +++ K D A + M S G PD + +L A+ +A ELL
Sbjct: 320 TTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLK 379
Query: 471 NF---NHPNNEPGIN 482
N P NE N
Sbjct: 380 EMVRKNCPPNEVTFN 394
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 80/341 (23%), Positives = 159/341 (46%), Gaps = 45/341 (13%)
Query: 70 LKQLKKWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAP 129
L + ++W E+L+ + ++ NE+ F I ++G +A ++ M++ G
Sbjct: 365 LCRAERWEDAKELLKEM-VRKNCPPNEVTFNTFICILCQKGLIEQATMLIEQMSEHGCEV 423
Query: 130 SVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVF 189
++V++ AL+ + GR +A +F M +P+ +TY +L A + A E+
Sbjct: 424 NIVTYNALVNGFCVQGRVDSALELFYSMPC---KPNTITYTTLLTGLCNAERLDAAAELL 480
Query: 190 MTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLM--- 246
+L ++ +P + F++++ + + G ++A +L M E G + +TYN+L+
Sbjct: 481 AEMLQKDCAP---NVVTFNVLVSFFCQKGLMDEAIELVEQMMEHGCTPNLITYNTLLDGI 537
Query: 247 SFETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTH 306
+ + N +E ++ + G+ PD+V+Y+ +I + R EEA+ +F + D G+RP
Sbjct: 538 TNDCNSEEALELLHGLVSNGVSPDIVTYSSIIGVLSREDRVEEAIKMFHIVQDLGMRPKA 597
Query: 307 KAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRR 366
YN +L A RC+ D GA FF
Sbjct: 598 VIYNKILLALC-----------------KRCNTD------------------GAIDFFAY 622
Query: 367 LKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGI 407
+ +G +PN +TY TLI+G A + L++ ++ ++ G+
Sbjct: 623 MVSNGCMPNELTYITLIEGLANEDFLKETRDLLRELCSRGV 663
>gi|334183626|ref|NP_176639.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|122242336|sp|Q0WKZ3.1|PP105_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g64580
gi|110741328|dbj|BAF02214.1| hypothetical protein [Arabidopsis thaliana]
gi|332196134|gb|AEE34255.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 523
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 100/408 (24%), Positives = 191/408 (46%), Gaps = 13/408 (3%)
Query: 76 WNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHT 135
+++ E+L+ I S DF ++T K F+ + M G + + S T
Sbjct: 64 FSLFCEMLQSRPIPSIVDFTR-----VLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFT 118
Query: 136 ALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDE 195
L+ + R R A A+ +M G RPS +T +L F + N+F+EA ++L+D
Sbjct: 119 ILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEA----VSLVDS 174
Query: 196 -EKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETN--- 251
+ P+ +++ +I K A ++F M ++G++ VTYN+L+S +N
Sbjct: 175 MDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGR 234
Query: 252 YKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNI 311
+ + +++ M + + P+V+ + LI+ + K EA +++EM+ V P YN
Sbjct: 235 WTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNS 294
Query: 312 LLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDG 371
L++ F I G + A+ +F M C PD+ +Y T+++ + + +E K F + G
Sbjct: 295 LINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQG 354
Query: 372 FVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAV 431
V + TY TLI GY + L +++++M G+ P+ + ++D N + A+
Sbjct: 355 LVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKAL 414
Query: 432 VWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEP 479
V ++++ D NI++ D+ EA L + +P
Sbjct: 415 VMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKP 462
Score = 130 bits (326), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 93/369 (25%), Positives = 168/369 (45%), Gaps = 11/369 (2%)
Query: 59 PKDLVLGTLVRLKQLKKWNVVSEVLEWLRIQSWWDF--NEMDFLMLITAYGKQGDFNKAE 116
P + LG+L L + N E + + + F N + + +I K D N A
Sbjct: 147 PSIVTLGSL--LNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNAL 204
Query: 117 KVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLF 176
+V M KKG V++ L+ GR+ +A + R M P+ + + ++ F
Sbjct: 205 EVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTF 264
Query: 177 VEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQ 236
V+ EA ++ ++ + + P+ ++ +I + G A+ +F LM +G
Sbjct: 265 VKEGNLLEARNLYKEMI---RRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCF 321
Query: 237 QSTVTYNSLMSFETNYKEVS---KIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAV 293
VTYN+L++ K V K++ +M GL D +Y LI+ Y +A + A V
Sbjct: 322 PDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKV 381
Query: 294 FEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVN 353
F M+D GV P YNILLD +G +++A + + +++ DI +Y ++
Sbjct: 382 FNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCR 441
Query: 354 ASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTI 413
++ A FR L + G P+ I Y T+I G + + ++ +M+ +G P++ I
Sbjct: 442 TDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRMKEDGFMPSERI 501
Query: 414 F-TTIMDAY 421
+ T+ D Y
Sbjct: 502 YDETLRDHY 510
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 94/427 (22%), Positives = 195/427 (45%), Gaps = 12/427 (2%)
Query: 48 LRSERTRGQPLPKDL-VLGTLVRLKQLKKWNVVSEVLEWLRIQSWWDFNEM-DFLMLITA 105
L E + +P+P + L + ++ K+++V + + ++++ +++ F +LI
Sbjct: 66 LFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIV--IYLYHKMENLGISHDLYSFTILIHC 123
Query: 106 YGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPS 165
+ + + A +L M K G+ PS+V+ +L+ + +G R++ A ++ M G P+
Sbjct: 124 FCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPN 183
Query: 166 ALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARK 225
+ Y ++ + A EVF + EK ++ D ++ +I +G + A +
Sbjct: 184 VVIYNTVINGLCKNRDLNNALEVFYCM---EKKGIRADAVTYNTLISGLSNSGRWTDAAR 240
Query: 226 LFALMAERGVQQSTVTYNSLM-SF--ETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYG 282
L M +R + + + + +L+ +F E N E +Y +M R + P+V +Y LIN +
Sbjct: 241 LLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFC 300
Query: 283 KARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDIC 342
+A +F+ M+ G P YN L+ F S V+ +F M D
Sbjct: 301 IHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAF 360
Query: 343 SYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKM 402
+Y T++ Y A + A+K F R+ G P+++TY L+ +EK + + + +
Sbjct: 361 TYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDL 420
Query: 403 RVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLS-LAKTADE 461
+ + + + + I+ + A ++ + G PD A ++S L + +
Sbjct: 421 QKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQ 480
Query: 462 RNEANEL 468
R EA++L
Sbjct: 481 R-EADKL 486
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 84/347 (24%), Positives = 150/347 (43%), Gaps = 6/347 (1%)
Query: 146 RYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQK 205
++ +A ++F M S P PS + + +L + + NKF ++ + E + D
Sbjct: 59 KFDDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKM---ENLGISHDLY 115
Query: 206 MFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETN---YKEVSKIYDQM 262
F ++I+ + + A L M + G + S VT SL++ ++E + D M
Sbjct: 116 SFTILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSM 175
Query: 263 QRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMV 322
G P+VV Y +IN K R AL VF M G+R YN L+ + SG
Sbjct: 176 DGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRW 235
Query: 323 DQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTL 382
A + + M + + P++ +T ++ +V ++ A ++ + + VPNV TY +L
Sbjct: 236 TDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSL 295
Query: 383 IKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGF 442
I G+ L ++D M G P+ + T++ + K+K + + + EM G
Sbjct: 296 INGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGL 355
Query: 443 PPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGINGLSISVD 489
D N L+ A + N A ++ P I +I +D
Sbjct: 356 VGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLD 402
>gi|147742764|gb|ABQ50546.1| hypothetical protein [Brassica rapa]
Length = 650
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 108/458 (23%), Positives = 211/458 (46%), Gaps = 46/458 (10%)
Query: 56 QPLPKDLVLGTLVRLKQLKKWNVVSEVLEWL--RIQSWWDFNEMDFLMLITAYGKQGDFN 113
Q +P + L T+V LK + VSE ++ + + + N+ + ++ K G+
Sbjct: 190 QHVPDLITLNTIVNGLCLK--DRVSEAVDLIARMMANGCQPNQFTYGPILNRMCKSGNTA 247
Query: 114 KAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIIL 173
A +L M + P VV++T +++ + GR +A + F M++ G + + TY ++
Sbjct: 248 SALDLLRKMEHRKIKPHVVTYTIIIDNLCKDGRLDDALSFFSEMETKGIKANVFTYNSLI 307
Query: 174 KLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAER 233
F ++ + ++ L D + P+ F +I K G +A+ L+ M R
Sbjct: 308 GSFCSFGRWDDGAQL---LRDMITRKITPNVVTFSALIDSLVKEGKLTEAKDLYNEMITR 364
Query: 234 GVQQSTVTYNSLMSFETNYK---EVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEA 290
G++ +T+TYNSL+ N K E +++ D M G PD+ +Y +LIN + KA++ ++
Sbjct: 365 GIEPNTITYNSLIYGLCNDKRLDEANQMMDLMVSKGCDPDIWTYNILINGFCKAKQVDDG 424
Query: 291 L-----------------------------------AVFEEMLDAGVRPTHKAYNILLDA 315
+ VF+EM+ GV P Y ILLD
Sbjct: 425 MRLFRKMSLRGMIADTVTYSTLIQGFCQSRKLIVAKKVFQEMVSQGVHPGIMTYAILLDG 484
Query: 316 FAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPN 375
+G +++A + M + + DI Y ++ NA+ ++ A F L G +
Sbjct: 485 LCDNGELEEALGILDQMHKCKMELDIGIYNIIIHGMCNANKVDDAWSLFCSLPSKGVKRD 544
Query: 376 VITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYK 435
+ +Y ++ G K ++L + ++ KM+ +G +P+ + T++ A+ + D ++V +
Sbjct: 545 IQSYNIMLSGLCKRSSLSEADALFRKMKEDGYEPDGCTYNTLIRAHLRGNDITTSVQLIE 604
Query: 436 EMESCGFPPDQKAKNILLSLAKTAD-ERNEANELLGNF 472
EM+ CGF D I++ + + + +++ N L G F
Sbjct: 605 EMKRCGFSSDASTVKIVMDMLSSGELDKSFLNMLSGPF 642
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 82/370 (22%), Positives = 165/370 (44%), Gaps = 6/370 (1%)
Query: 113 NKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQII 172
++A +++ M G P+ ++ ++ + G +A + R+M+ +P +TY II
Sbjct: 212 SEAVDLIARMMANGCQPNQFTYGPILNRMCKSGNTASALDLLRKMEHRKIKPHVVTYTII 271
Query: 173 LKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAE 232
+ + + +A F + E +K + ++ +I + G ++ +L M
Sbjct: 272 IDNLCKDGRLDDALSFFSEM---ETKGIKANVFTYNSLIGSFCSFGRWDDGAQLLRDMIT 328
Query: 233 RGVQQSTVTYNSLMSF---ETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEE 289
R + + VT+++L+ E E +Y++M G++P+ ++Y LI +R +E
Sbjct: 329 RKITPNVVTFSALIDSLVKEGKLTEAKDLYNEMITRGIEPNTITYNSLIYGLCNDKRLDE 388
Query: 290 ALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLS 349
A + + M+ G P YNIL++ F + VD +F+ M D +Y+T++
Sbjct: 389 ANQMMDLMVSKGCDPDIWTYNILINGFCKAKQVDDGMRLFRKMSLRGMIADTVTYSTLIQ 448
Query: 350 AYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKP 409
+ + + A+K F+ + G P ++TY L+ G LE+ + I D+M ++
Sbjct: 449 GFCQSRKLIVAKKVFQEMVSQGVHPGIMTYAILLDGLCDNGELEEALGILDQMHKCKMEL 508
Query: 410 NQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELL 469
+ I+ I+ D A + + S G D ++ NI+LS +EA+ L
Sbjct: 509 DIGIYNIIIHGMCNANKVDDAWSLFCSLPSKGVKRDIQSYNIMLSGLCKRSSLSEADALF 568
Query: 470 GNFNHPNNEP 479
EP
Sbjct: 569 RKMKEDGYEP 578
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 78/340 (22%), Positives = 142/340 (41%), Gaps = 14/340 (4%)
Query: 149 NAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFH 208
+A A+F+ M S P P+ + + +LF + K+ + V E + D +
Sbjct: 73 DAVALFQSMLRSRPLPTVIDFN---RLFGLLARTKQYDLVLALCKQMELKGIAYDLYTLN 129
Query: 209 MMIYMY---KKAG-GYEKARKLFALMAERGVQQSTVTYNSLM---SFETNYKEVSKIYDQ 261
+MI + +K G + K+F L G + +TVT+N+L+ E E ++ D
Sbjct: 130 IMINCFCRRRKLGFAFSAMGKIFKL----GYEPNTVTFNTLLNGLCLEGRVFEAVELVDC 185
Query: 262 MQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGM 321
M + PD+++ ++N R EA+ + M+ G +P Y +L+ SG
Sbjct: 186 MVLSQHVPDLITLNTIVNGLCLKDRVSEAVDLIARMMANGCQPNQFTYGPILNRMCKSGN 245
Query: 322 VDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGT 381
A + + M + P + +YT ++ ++ A FF ++ G NV TY +
Sbjct: 246 TASALDLLRKMEHRKIKPHVVTYTIIIDNLCKDGRLDDALSFFSEMETKGIKANVFTYNS 305
Query: 382 LIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCG 441
LI + + ++ M I PN F+ ++D+ K A Y EM + G
Sbjct: 306 LIGSFCSFGRWDDGAQLLRDMITRKITPNVVTFSALIDSLVKEGKLTEAKDLYNEMITRG 365
Query: 442 FPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGI 481
P+ N L+ +EAN+++ +P I
Sbjct: 366 IEPNTITYNSLIYGLCNDKRLDEANQMMDLMVSKGCDPDI 405
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 61/271 (22%), Positives = 114/271 (42%), Gaps = 3/271 (1%)
Query: 223 ARKLFALMAERGVQQSTVTYNSLMSFETNYKE---VSKIYDQMQRAGLQPDVVSYALLIN 279
A LF M + + +N L K+ V + QM+ G+ D+ + ++IN
Sbjct: 74 AVALFQSMLRSRPLPTVIDFNRLFGLLARTKQYDLVLALCKQMELKGIAYDLYTLNIMIN 133
Query: 280 AYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSP 339
+ + R+ A + ++ G P +N LL+ + G V +A + CM + P
Sbjct: 134 CFCRRRKLGFAFSAMGKIFKLGYEPNTVTFNTLLNGLCLEGRVFEAVELVDCMVLSQHVP 193
Query: 340 DICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIY 399
D+ + T+++ + A R+ +G PN TYG ++ K N +++
Sbjct: 194 DLITLNTIVNGLCLKDRVSEAVDLIARMMANGCQPNQFTYGPILNRMCKSGNTASALDLL 253
Query: 400 DKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTA 459
KM IKP+ +T I+D K+ D A+ ++ EME+ G + N L+ +
Sbjct: 254 RKMEHRKIKPHVVTYTIIIDNLCKDGRLDDALSFFSEMETKGIKANVFTYNSLIGSFCSF 313
Query: 460 DERNEANELLGNFNHPNNEPGINGLSISVDE 490
++ +LL + P + S +D
Sbjct: 314 GRWDDGAQLLRDMITRKITPNVVTFSALIDS 344
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/214 (21%), Positives = 90/214 (42%)
Query: 286 REEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYT 345
++++A+A+F+ ML + PT +N L A + D + K M + D+ +
Sbjct: 70 KKDDAVALFQSMLRSRPLPTVIDFNRLFGLLARTKQYDLVLALCKQMELKGIAYDLYTLN 129
Query: 346 TMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVN 405
M++ + + A ++ + G+ PN +T+ TL+ G + + +E+ D M ++
Sbjct: 130 IMINCFCRRRKLGFAFSAMGKIFKLGYEPNTVTFNTLLNGLCLEGRVFEAVELVDCMVLS 189
Query: 406 GIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEA 465
P+ TI++ AV M + G P+Q +L+ + A
Sbjct: 190 QHVPDLITLNTIVNGLCLKDRVSEAVDLIARMMANGCQPNQFTYGPILNRMCKSGNTASA 249
Query: 466 NELLGNFNHPNNEPGINGLSISVDEEDDDDDDDE 499
+LL H +P + +I +D D D+
Sbjct: 250 LDLLRKMEHRKIKPHVVTYTIIIDNLCKDGRLDD 283
>gi|15233259|ref|NP_188222.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75274469|sp|Q9LW84.1|PP236_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g16010
gi|9294448|dbj|BAB02667.1| unnamed protein product [Arabidopsis thaliana]
gi|332642241|gb|AEE75762.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 642
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 105/401 (26%), Positives = 186/401 (46%), Gaps = 43/401 (10%)
Query: 128 APSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEE 187
+P+V+S L++A GR A ++F + + +P++ TY ++ + ++ + ++ E
Sbjct: 161 SPAVLSE--LVKALGRAKMVSKALSVFYQAKGRKCKPTSSTYNSVILMLMQEGQHEKVHE 218
Query: 188 VFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMS 247
V+ + +E PD + +I Y+K G + A +LF M + +Q + Y +L+
Sbjct: 219 VYTEMCNE--GDCFPDTITYSALISSYEKLGRNDSAIRLFDEMKDNCMQPTEKIYTTLLG 276
Query: 248 FETNYKEVSK---IYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRP 304
+V K ++++M+RAG P V +Y LI GKA R +EA +++ML G+ P
Sbjct: 277 IYFKVGKVEKALDLFEEMKRAGCSPTVYTYTELIKGLGKAGRVDEAYGFYKDMLRDGLTP 336
Query: 305 THKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSA-YVNASDMEGAEKF 363
N L++ G V++ VF M RC+P + SY T++ A + + + + +
Sbjct: 337 DVVFLNNLMNILGKVGRVEELTNVFSEMGMWRCTPTVVSYNTVIKALFESKAHVSEVSSW 396
Query: 364 FRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGK 423
F ++K D P+ TY LI GY K N +EK + + ++M G P + ++++A GK
Sbjct: 397 FDKMKADSVSPSEFTYSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGK 456
Query: 424 NKDFDS-----------------------------------AVVWYKEMESCGFPPDQKA 448
K +++ AV + EM++ G PD A
Sbjct: 457 AKRYEAANELFKELKENFGNVSSRVYAVMIKHFGKCGKLSEAVDLFNEMKNQGSGPDVYA 516
Query: 449 KNILLSLAKTADERNEANELLGNFNHPNNEPGINGLSISVD 489
N L+S A NEAN LL IN +I ++
Sbjct: 517 YNALMSGMVKAGMINEANSLLRKMEENGCRADINSHNIILN 557
Score = 130 bits (326), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 92/399 (23%), Positives = 181/399 (45%), Gaps = 42/399 (10%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
LI++Y K G + A ++ M P+ +T L+ Y + G+ + A +F M+ +G
Sbjct: 239 LISSYEKLGRNDSAIRLFDEMKDNCMQPTEKIYTTLLGIYFKVGKVEKALDLFEEMKRAG 298
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
P+ TY ++K +A + EA + +L + L PD + ++ + K G E
Sbjct: 299 CSPTVYTYTELIKGLGKAGRVDEAYGFYKDML---RDGLTPDVVFLNNLMNILGKVGRVE 355
Query: 222 KARKLFALMAERGVQQSTVTYNSLMS--FET--NYKEVSKIYDQMQRAGLQPDVVSYALL 277
+ +F+ M + V+YN+++ FE+ + EVS +D+M+ + P +Y++L
Sbjct: 356 ELTNVFSEMGMWRCTPTVVSYNTVIKALFESKAHVSEVSSWFDKMKADSVSPSEFTYSIL 415
Query: 278 INAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDA---------------------- 315
I+ Y K R E+AL + EEM + G P AY L++A
Sbjct: 416 IDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGKAKRYEAANELFKELKENFG 475
Query: 316 -------------FAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEK 362
F G + +A +F M+ PD+ +Y ++S V A + A
Sbjct: 476 NVSSRVYAVMIKHFGKCGKLSEAVDLFNEMKNQGSGPDVYAYNALMSGMVKAGMINEANS 535
Query: 363 FFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYG 422
R+++++G ++ ++ ++ G+A+ + +E+++ ++ +GIKP+ + T++ +
Sbjct: 536 LLRKMEENGCRADINSHNIILNGFARTGVPRRAIEMFETIKHSGIKPDGVTYNTLLGCFA 595
Query: 423 KNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADE 461
F+ A +EM+ GF D + +L D
Sbjct: 596 HAGMFEEAARMMREMKDKGFEYDAITYSSILDAVGNVDH 634
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 82/342 (23%), Positives = 156/342 (45%), Gaps = 42/342 (12%)
Query: 168 TYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLF 227
TY +++ EA + E ++ + P + ++ +A KA +F
Sbjct: 128 TYMTLIRCLEEARLYGEMYRTIQEVVRNTYVSVSP--AVLSELVKALGRAKMVSKALSVF 185
Query: 228 ALMAERGVQQSTVTYNSLMSF---ETNYKEVSKIYDQMQRAG-LQPDVVSYALLINAYGK 283
R + ++ TYNS++ E +++V ++Y +M G PD ++Y+ LI++Y K
Sbjct: 186 YQAKGRKCKPTSSTYNSVILMLMQEGQHEKVHEVYTEMCNEGDCFPDTITYSALISSYEK 245
Query: 284 ARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICS 343
R + A+ +F+EM D ++PT K Y LL + G V++A +F+ M+R CSP + +
Sbjct: 246 LGRNDSAIRLFDEMKDNCMQPTEKIYTTLLGIYFKVGKVEKALDLFEEMKRAGCSPTVYT 305
Query: 344 YTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEI----- 398
YT ++ A ++ A F++ + +DG P+V+ L+ KV +E++ +
Sbjct: 306 YTELIKGLGKAGRVDEAYGFYKDMLRDGLTPDVVFLNNLMNILGKVGRVEELTNVFSEMG 365
Query: 399 -------------------------------YDKMRVNGIKPNQTIFTTIMDAYGKNKDF 427
+DKM+ + + P++ ++ ++D Y K
Sbjct: 366 MWRCTPTVVSYNTVIKALFESKAHVSEVSSWFDKMKADSVSPSEFTYSILIDGYCKTNRV 425
Query: 428 DSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELL 469
+ A++ +EM+ GFPP A L++ A ANEL
Sbjct: 426 EKALLLLEEMDEKGFPPCPAAYCSLINALGKAKRYEAANELF 467
Score = 88.6 bits (218), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 64/275 (23%), Positives = 126/275 (45%), Gaps = 43/275 (15%)
Query: 88 IQSWWDF--------NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALME 139
+ SW+D +E + +LI Y K KA +L M++KG+ P ++ +L+
Sbjct: 393 VSSWFDKMKADSVSPSEFTYSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLIN 452
Query: 140 AYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSP 199
A G+ RY+ A +F+ ++ + S+ Y +++K F + K EA ++F + ++
Sbjct: 453 ALGKAKRYEAANELFKELKENFGNVSSRVYAVMIKHFGKCGKLSEAVDLFNEMKNQGSG- 511
Query: 200 LKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSKIY 259
PD ++ ++ KAG +A NSL+
Sbjct: 512 --PDVYAYNALMSGMVKAGMINEA-------------------NSLLR------------ 538
Query: 260 DQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAIS 319
+M+ G + D+ S+ +++N + + A+ +FE + +G++P YN LL FA +
Sbjct: 539 -KMEENGCRADINSHNIILNGFARTGVPRRAIEMFETIKHSGIKPDGVTYNTLLGCFAHA 597
Query: 320 GMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNA 354
GM ++A + + M+ D +Y+++L A N
Sbjct: 598 GMFEEAARMMREMKDKGFEYDAITYSSILDAVGNV 632
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 62/235 (26%), Positives = 108/235 (45%), Gaps = 19/235 (8%)
Query: 233 RGVQQSTVTYNSLMSFETNYKEVSKIYDQMQR----------AGLQPDVVSYALLINAYG 282
R Q TY +L+ E +++Y +M R + P V+S L+ A G
Sbjct: 120 RNFQHDCSTYMTLI----RCLEEARLYGEMYRTIQEVVRNTYVSVSPAVLSE--LVKALG 173
Query: 283 KARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFK--CMRRDRCSPD 340
+A+ +AL+VF + +PT YN ++ G ++ V+ C D C PD
Sbjct: 174 RAKMVSKALSVFYQAKGRKCKPTSSTYNSVILMLMQEGQHEKVHEVYTEMCNEGD-CFPD 232
Query: 341 ICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYD 400
+Y+ ++S+Y + A + F +K + P Y TL+ Y KV +EK +++++
Sbjct: 233 TITYSALISSYEKLGRNDSAIRLFDEMKDNCMQPTEKIYTTLLGIYFKVGKVEKALDLFE 292
Query: 401 KMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSL 455
+M+ G P +T ++ GK D A +YK+M G PD N L+++
Sbjct: 293 EMKRAGCSPTVYTYTELIKGLGKAGRVDEAYGFYKDMLRDGLTPDVVFLNNLMNI 347
>gi|449531171|ref|XP_004172561.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g59900-like [Cucumis sativus]
Length = 761
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 93/355 (26%), Positives = 173/355 (48%), Gaps = 43/355 (12%)
Query: 101 MLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSS 160
+LI K+G +A K+L + ++G P VV+ T L++ R A +F +MQ
Sbjct: 377 VLIDMLCKKGKVIEANKLLEVVIQRGCIPDVVTCTTLVKGLCMKHRISKATQLFLKMQKL 436
Query: 161 GPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSP----LKPDQKMFHMMIYMYKK 216
G P+ +T ++K ++ K A E+ +L + SP KP+ + ++I K
Sbjct: 437 GCMPNVVTCATLMKGLCQSGNIKIALELHKNMLSDT-SPYGINCKPNAISYSIIIDGLCK 495
Query: 217 AGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSKIYDQMQRAGLQPDVVSYAL 276
G ++AR+LF +M+ G+ PDV+SY
Sbjct: 496 CGREDEARELF--------------------------------KEMKALGVIPDVISYTS 523
Query: 277 LINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDR 336
LI+ + ++ + ++A +F EM+D GV+P +++L+D G V +A + + M +
Sbjct: 524 LIHGFCRSGKWKDAKYLFNEMVDIGVQPDVTTFSVLIDMLCKEGKVIEANELLEVMIQRG 583
Query: 337 CSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMM 396
C P+ +YTT++ + A + F ++++ G +P+V+TYGTL+KG + N++ +
Sbjct: 584 CIPNTVTYTTLVKGLCMNDRISEATQLFMKMQKLGCLPDVVTYGTLMKGLCQTGNIKTAL 643
Query: 397 EIYDKMRVN------GIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPD 445
E++ KM + KP+ ++ I+D K+ D A +KEM++ G P+
Sbjct: 644 ELHKKMLSDTGQYGTNFKPDVISYSIIIDGLCKHGREDEARELFKEMKALGVIPN 698
Score = 139 bits (349), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 109/487 (22%), Positives = 211/487 (43%), Gaps = 59/487 (12%)
Query: 59 PKDLVLGTLVR-LKQLKKWNVVSEV-LEWLRIQSWWDF----NEMDFLMLITAYGKQGDF 112
P + GTL++ L Q K N+ + E L S + + + ++I K
Sbjct: 78 PDAIAYGTLMKGLCQTGKINIALHLHQEMLNDTSQYGIKCKPTLVSYSIIIDGLCKDRRE 137
Query: 113 NKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQII 172
++A ++ M +G P V+S+T+L+ + R G+++ A+ +F M G R T ++
Sbjct: 138 DEARELFKEMKAQGMMPDVISYTSLIHGFCRSGKWEKAKCLFNEMLDVGIRSDVTTSSML 197
Query: 173 LKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAE 232
+ + + K EA E+ ++ + D + +I +A +LF M +
Sbjct: 198 IDILCKEGKVIEANELLEVMI---QRGCILDIVTYSTLIKGLCMKHRISEATRLFMSMQK 254
Query: 233 RGVQQSTVTYNSLM-------SFETNYK-------------------------------- 253
G + + Y +LM + T +
Sbjct: 255 LGCRPDAIAYGTLMKGLCQTGNINTALQLHQEMLNDTGRYGIKCKPTLISYSIIIDGLCK 314
Query: 254 -----EVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKA 308
E +++ +M+ G+ PDV+SY LI+ + + + E+A +F EMLD G++P
Sbjct: 315 DRREDEARELFKEMKAQGIMPDVISYTTLIHGFCLSGKWEKAKCLFNEMLDVGIQPDVTT 374
Query: 309 YNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLK 368
++L+D G V +A + + + + C PD+ + TT++ + A + F +++
Sbjct: 375 SSVLIDMLCKKGKVIEANKLLEVVIQRGCIPDVVTCTTLVKGLCMKHRISKATQLFLKMQ 434
Query: 369 QDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVN----GI--KPNQTIFTTIMDAYG 422
+ G +PNV+T TL+KG + N++ +E++ M + GI KPN ++ I+D
Sbjct: 435 KLGCMPNVVTCATLMKGLCQSGNIKIALELHKNMLSDTSPYGINCKPNAISYSIIIDGLC 494
Query: 423 KNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGIN 482
K D A +KEM++ G PD + L+ + + +A L +P +
Sbjct: 495 KCGREDEARELFKEMKALGVIPDVISYTSLIHGFCRSGKWKDAKYLFNEMVDIGVQPDVT 554
Query: 483 GLSISVD 489
S+ +D
Sbjct: 555 TFSVLID 561
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 78/286 (27%), Positives = 150/286 (52%), Gaps = 14/286 (4%)
Query: 129 PSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEV 188
P+ +S++ +++ + GR A +F+ M++ G P ++Y ++ F + K+K+A+ +
Sbjct: 481 PNAISYSIIIDGLCKCGREDEARELFKEMKALGVIPDVISYTSLIHGFCRSGKWKDAKYL 540
Query: 189 FMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSL--- 245
F ++D ++PD F ++I M K G +A +L +M +RG +TVTY +L
Sbjct: 541 FNEMVD---IGVQPDVTTFSVLIDMLCKEGKVIEANELLEVMIQRGCIPNTVTYTTLVKG 597
Query: 246 MSFETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEML-DAG--- 301
+ E ++++ +MQ+ G PDVV+Y L+ + + AL + ++ML D G
Sbjct: 598 LCMNDRISEATQLFMKMQKLGCLPDVVTYGTLMKGLCQTGNIKTALELHKKMLSDTGQYG 657
Query: 302 --VRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEG 359
+P +Y+I++D G D+AR +FK M+ P++ SYT+++ + + +E
Sbjct: 658 TNFKPDVISYSIIIDGLCKHGREDEARELFKEMKALGVIPNVISYTSLIHGFCRSGKLED 717
Query: 360 AEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVN 405
A+ F + G N +TY +I G+ K ++K ++ KM N
Sbjct: 718 AKHLFNEMVDQGVQLNAVTYSVMIHGFCKEGQIDK--ALFQKMEAN 761
Score = 132 bits (331), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 94/398 (23%), Positives = 180/398 (45%), Gaps = 41/398 (10%)
Query: 101 MLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSS 160
+LI + K+G +A ++L M ++G +V+++ L++ R A +F M+
Sbjct: 15 VLIDMFCKEGKVIEANELLEVMVQRGCILDIVTYSTLIKGLCMKHRISEATQLFMSMKKL 74
Query: 161 GPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKS---PLKPDQKMFHMMIYMYKKA 217
G RP A+ Y ++K + K A + +L++ KP + ++I K
Sbjct: 75 GCRPDAIAYGTLMKGLCQTGKINIALHLHQEMLNDTSQYGIKCKPTLVSYSIIIDGLCKD 134
Query: 218 GGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSKIYDQMQRAGLQPDVVSYALL 277
++AR+LF +M+ G+ PDV+SY L
Sbjct: 135 RREDEARELF--------------------------------KEMKAQGMMPDVISYTSL 162
Query: 278 INAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRC 337
I+ + ++ + E+A +F EMLD G+R ++L+D G V +A + + M + C
Sbjct: 163 IHGFCRSGKWEKAKCLFNEMLDVGIRSDVTTSSMLIDILCKEGKVIEANELLEVMIQRGC 222
Query: 338 SPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMME 397
DI +Y+T++ + A + F +++ G P+ I YGTL+KG + N+ ++
Sbjct: 223 ILDIVTYSTLIKGLCMKHRISEATRLFMSMQKLGCRPDAIAYGTLMKGLCQTGNINTALQ 282
Query: 398 IYDKMRVN----GIKPNQTI--FTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNI 451
++ +M + GIK T+ ++ I+D K++ D A +KEM++ G PD +
Sbjct: 283 LHQEMLNDTGRYGIKCKPTLISYSIIIDGLCKDRREDEARELFKEMKAQGIMPDVISYTT 342
Query: 452 LLSLAKTADERNEANELLGNFNHPNNEPGINGLSISVD 489
L+ + + +A L +P + S+ +D
Sbjct: 343 LIHGFCLSGKWEKAKCLFNEMLDVGIQPDVTTSSVLID 380
Score = 131 bits (330), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 84/381 (22%), Positives = 177/381 (46%), Gaps = 12/381 (3%)
Query: 101 MLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSS 160
MLI K+G +A ++L M ++G +V+++ L++ R A +F MQ
Sbjct: 196 MLIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMKHRISEATRLFMSMQKL 255
Query: 161 GPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKS---PLKPDQKMFHMMIYMYKKA 217
G RP A+ Y ++K + A ++ +L++ KP + ++I K
Sbjct: 256 GCRPDAIAYGTLMKGLCQTGNINTALQLHQEMLNDTGRYGIKCKPTLISYSIIIDGLCKD 315
Query: 218 GGYEKARKLFALMAERGVQQSTVTYNSLM---SFETNYKEVSKIYDQMQRAGLQPDVVSY 274
++AR+LF M +G+ ++Y +L+ +++ ++++M G+QPDV +
Sbjct: 316 RREDEARELFKEMKAQGIMPDVISYTTLIHGFCLSGKWEKAKCLFNEMLDVGIQPDVTTS 375
Query: 275 ALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRR 334
++LI+ K + EA + E ++ G P L+ + + +A +F M++
Sbjct: 376 SVLIDMLCKKGKVIEANKLLEVVIQRGCIPDVVTCTTLVKGLCMKHRISKATQLFLKMQK 435
Query: 335 DRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQD------GFVPNVITYGTLIKGYAK 388
C P++ + T++ + +++ A + + + D PN I+Y +I G K
Sbjct: 436 LGCMPNVVTCATLMKGLCQSGNIKIALELHKNMLSDTSPYGINCKPNAISYSIIIDGLCK 495
Query: 389 VNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKA 448
++ E++ +M+ G+ P+ +T+++ + ++ + A + EM G PD
Sbjct: 496 CGREDEARELFKEMKALGVIPDVISYTSLIHGFCRSGKWKDAKYLFNEMVDIGVQPDVTT 555
Query: 449 KNILLSLAKTADERNEANELL 469
++L+ + + EANELL
Sbjct: 556 FSVLIDMLCKEGKVIEANELL 576
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 90/372 (24%), Positives = 171/372 (45%), Gaps = 20/372 (5%)
Query: 113 NKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQII 172
++A ++ M +G P V+S+T L+ + G+++ A+ +F M G +P T ++
Sbjct: 319 DEARELFKEMKAQGIMPDVISYTTLIHGFCLSGKWEKAKCLFNEMLDVGIQPDVTTSSVL 378
Query: 173 LKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAE 232
+ + + K EA ++ ++ + PD ++ KA +LF M +
Sbjct: 379 IDMLCKKGKVIEANKLLEVVI---QRGCIPDVVTCTTLVKGLCMKHRISKATQLFLKMQK 435
Query: 233 RGVQQSTVTYNSLM---SFETNYKEVSKIYDQMQR------AGLQPDVVSYALLINAYGK 283
G + VT +LM N K +++ M +P+ +SY+++I+ K
Sbjct: 436 LGCMPNVVTCATLMKGLCQSGNIKIALELHKNMLSDTSPYGINCKPNAISYSIIIDGLCK 495
Query: 284 ARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICS 343
RE+EA +F+EM GV P +Y L+ F SG A+ +F M PD+ +
Sbjct: 496 CGREDEARELFKEMKALGVIPDVISYTSLIHGFCRSGKWKDAKYLFNEMVDIGVQPDVTT 555
Query: 344 YTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMR 403
++ ++ + A + + Q G +PN +TY TL+KG + + + +++ KM+
Sbjct: 556 FSVLIDMLCKEGKVIEANELLEVMIQRGCIPNTVTYTTLVKGLCMNDRISEATQLFMKMQ 615
Query: 404 VNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMES------CGFPPDQKAKNILL-SLA 456
G P+ + T+M + + +A+ +K+M S F PD + +I++ L
Sbjct: 616 KLGCLPDVVTYGTLMKGLCQTGNIKTALELHKKMLSDTGQYGTNFKPDVISYSIIIDGLC 675
Query: 457 KTADERNEANEL 468
K E +EA EL
Sbjct: 676 KHGRE-DEAREL 686
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/214 (22%), Positives = 97/214 (45%), Gaps = 6/214 (2%)
Query: 262 MQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGM 321
M G+QPDV + +LI+ + K + EA + E M+ G Y+ L+ +
Sbjct: 1 MLHVGIQPDVTTSGVLIDMFCKEGKVIEANELLEVMVQRGCILDIVTYSTLIKGLCMKHR 60
Query: 322 VDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDG------FVPN 375
+ +A +F M++ C PD +Y T++ + A + + D P
Sbjct: 61 ISEATQLFMSMKKLGCRPDAIAYGTLMKGLCQTGKINIALHLHQEMLNDTSQYGIKCKPT 120
Query: 376 VITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYK 435
+++Y +I G K ++ E++ +M+ G+ P+ +T+++ + ++ ++ A +
Sbjct: 121 LVSYSIIIDGLCKDRREDEARELFKEMKAQGMMPDVISYTSLIHGFCRSGKWEKAKCLFN 180
Query: 436 EMESCGFPPDQKAKNILLSLAKTADERNEANELL 469
EM G D ++L+ + + EANELL
Sbjct: 181 EMLDVGIRSDVTTSSMLIDILCKEGKVIEANELL 214
>gi|240254191|ref|NP_174467.4| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
thaliana]
gi|357528959|sp|Q9C6S6.2|PPR67_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At1g31840
gi|332193282|gb|AEE31403.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
thaliana]
Length = 840
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 103/408 (25%), Positives = 175/408 (42%), Gaps = 8/408 (1%)
Query: 103 ITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGP 162
I Y K GD A V M +G +P+VV++T L++ + GR A ++ ++ G
Sbjct: 363 IDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGM 422
Query: 163 RPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEK 222
PS +TY ++ F + + F D K PD ++ +++ K G
Sbjct: 423 EPSIVTYSSLIDGFCKCGNLRSG---FALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLH 479
Query: 223 ARKLFALMAERGVQQSTVTYNSLM---SFETNYKEVSKIYDQMQRAGLQPDVVSYALLIN 279
A + M + ++ + V +NSL+ + E K++ M G++PDV ++ ++
Sbjct: 480 AMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMR 539
Query: 280 AYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSP 339
R EEAL +F M G+ P AY L+DAF +F M+R++ S
Sbjct: 540 VSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCKHMKPTIGLQLFDLMQRNKISA 599
Query: 340 DICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIY 399
DI ++ +E A KFF L + P+++TY T+I GY + L++ I+
Sbjct: 600 DIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIF 659
Query: 400 DKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTA 459
+ ++V PN T ++ KN D D A+ + M G P+ L+ +
Sbjct: 660 ELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKS 719
Query: 460 DERNEANELLGNFNHPNNEPGINGLSISVDEEDDDDDDDEDDDDNIYH 507
+ + +L P I SI +D DE NI+H
Sbjct: 720 VDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDE--ATNIFH 765
Score = 124 bits (312), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 84/355 (23%), Positives = 165/355 (46%), Gaps = 6/355 (1%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
LI + K G+ + M K GY P VV + L++ + G +A +M
Sbjct: 432 LIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQS 491
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
R + + + ++ + N+F EA +VF + +KPD F ++ + G E
Sbjct: 492 IRLNVVVFNSLIDGWCRLNRFDEALKVFRLM---GIYGIKPDVATFTTVMRVSIMEGRLE 548
Query: 222 KARKLFALMAERGVQQSTVTYNSLM-SFETNYKEVS--KIYDQMQRAGLQPDVVSYALLI 278
+A LF M + G++ + Y +L+ +F + K +++D MQR + D+ ++I
Sbjct: 549 EALFLFFRMFKMGLEPDALAYCTLIDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVI 608
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCS 338
+ K R E+A F +++ + P YN ++ + +D+A +F+ ++
Sbjct: 609 HLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFG 668
Query: 339 PDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEI 398
P+ + T ++ +DM+GA + F + + G PN +TYG L+ ++K ++E ++
Sbjct: 669 PNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKL 728
Query: 399 YDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILL 453
+++M+ GI P+ ++ I+D K D A + + PD A IL+
Sbjct: 729 FEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILI 783
Score = 122 bits (305), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 79/348 (22%), Positives = 160/348 (45%), Gaps = 7/348 (2%)
Query: 109 QGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALT 168
+G+ KA + ++G+ +VS +++ + + A + + GP P+ +T
Sbjct: 230 KGEVTKALDFHRLVMERGFRVGIVSCNKVLKGLSVD-QIEVASRLLSLVLDCGPAPNVVT 288
Query: 169 YQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFA 228
+ ++ F + + A ++F + E+ ++PD + +I Y KAG KLF+
Sbjct: 289 FCTLINGFCKRGEMDRAFDLFKVM---EQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFS 345
Query: 229 LMAERGVQQSTVTYNSLMSFET---NYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKAR 285
+GV+ V ++S + + S +Y +M G+ P+VV+Y +LI +
Sbjct: 346 QALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDG 405
Query: 286 REEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYT 345
R EA ++ ++L G+ P+ Y+ L+D F G + +++ M + PD+ Y
Sbjct: 406 RIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYG 465
Query: 346 TMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVN 405
++ M A +F ++ NV+ + +LI G+ ++N ++ ++++ M +
Sbjct: 466 VLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIY 525
Query: 406 GIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILL 453
GIKP+ FTT+M + A+ + M G PD A L+
Sbjct: 526 GIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLI 573
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 81/370 (21%), Positives = 167/370 (45%), Gaps = 6/370 (1%)
Query: 115 AEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILK 174
A ++LS + G AP+VV+ L+ + + G A +F+ M+ G P + Y ++
Sbjct: 270 ASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLID 329
Query: 175 LFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERG 234
+ +A ++F L + +K D +F I +Y K+G A ++ M +G
Sbjct: 330 GYFKAGMLGMGHKLFSQALHKG---VKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQG 386
Query: 235 VQQSTVTYNSL---MSFETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEAL 291
+ + VTY L + + E +Y Q+ + G++P +V+Y+ LI+ + K
Sbjct: 387 ISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGF 446
Query: 292 AVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAY 351
A++E+M+ G P Y +L+D + G++ A M ++ + +++ +
Sbjct: 447 ALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGW 506
Query: 352 VNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQ 411
+ + A K FR + G P+V T+ T+++ LE+ + ++ +M G++P+
Sbjct: 507 CRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDA 566
Query: 412 TIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGN 471
+ T++DA+ K+ + + M+ D N+++ L +A++ N
Sbjct: 567 LAYCTLIDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNN 626
Query: 472 FNHPNNEPGI 481
EP I
Sbjct: 627 LIEGKMEPDI 636
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 78/348 (22%), Positives = 153/348 (43%), Gaps = 6/348 (1%)
Query: 101 MLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSS 160
+L+ KQG A + M + +VV +L++ + R R+ A +FR M
Sbjct: 466 VLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIY 525
Query: 161 GPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGY 220
G +P T+ ++++ + + +EA +F + K L+PD + +I + K
Sbjct: 526 GIKPDVATFTTVMRVSIMEGRLEEALFLFFRMF---KMGLEPDALAYCTLIDAFCKHMKP 582
Query: 221 EKARKLFALMAERGVQQSTVTYNSLMS--FETNYKE-VSKIYDQMQRAGLQPDVVSYALL 277
+LF LM + N ++ F+ + E SK ++ + ++PD+V+Y +
Sbjct: 583 TIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTM 642
Query: 278 INAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRC 337
I Y RR +EA +FE + P IL+ + +D A +F M
Sbjct: 643 ICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGS 702
Query: 338 SPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMME 397
P+ +Y ++ + + D+EG+ K F +++ G P++++Y +I G K +++
Sbjct: 703 KPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATN 762
Query: 398 IYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPD 445
I+ + + P+ + ++ Y K A + Y+ M G PD
Sbjct: 763 IFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRNGVKPD 810
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 78/165 (47%), Gaps = 4/165 (2%)
Query: 72 QLKKWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSV 131
L++ + + E L++ + N + +LI K D + A ++ S M +KG P+
Sbjct: 648 SLRRLDEAERIFELLKVTPFGP-NTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNA 706
Query: 132 VSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMT 191
V++ LM+ + + + + +F MQ G PS ++Y II+ + + EA +F
Sbjct: 707 VTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQ 766
Query: 192 LLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQ 236
+D + L PD + ++I Y K G +A L+ M GV+
Sbjct: 767 AIDAK---LLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRNGVK 808
>gi|18391414|ref|NP_563911.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75167758|sp|Q9ASZ8.1|PPR37_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g12620
gi|13605505|gb|AAK32746.1|AF361578_1 At1g12620/T12C24_25 [Arabidopsis thaliana]
gi|24111307|gb|AAN46777.1| At1g12620/T12C24_25 [Arabidopsis thaliana]
gi|332190781|gb|AEE28902.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 621
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 110/511 (21%), Positives = 238/511 (46%), Gaps = 43/511 (8%)
Query: 18 VFKDAADEAGKKNWR-RLMNQIEEVGSAVAV-LRSERTRGQPLPKDLVLGTLVRL-KQLK 74
VF +D GK ++R RL + I ++ AV L E TR +P P+ + L + + K
Sbjct: 27 VFSSVSDGKGKVSYRERLRSGIVDIKEDDAVDLFQEMTRSRPRPRLIDFSRLFSVVARTK 86
Query: 75 KWNVVSEVLEWLR----------------------------------IQSWWDFNEMDFL 100
++++V ++ + + I+ ++ + + F
Sbjct: 87 QYDLVLDLCKQMELKGIAHNLYTLSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFS 146
Query: 101 MLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSS 160
LI +G ++A +++ M + G+ P++++ AL+ G+ +A + RM +
Sbjct: 147 TLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVET 206
Query: 161 GPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGY 220
G +P+ +TY +LK+ ++ + A E+ + E+ +K D + ++I K G
Sbjct: 207 GFQPNEVTYGPVLKVMCKSGQTALAMELLRKM---EERKIKLDAVKYSIIIDGLCKDGSL 263
Query: 221 EKARKLFALMAERGVQQSTVTYNSLM---SFETNYKEVSKIYDQMQRAGLQPDVVSYALL 277
+ A LF M +G + + Y +L+ + + + +K+ M + + PDVV+++ L
Sbjct: 264 DNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSAL 323
Query: 278 INAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRC 337
I+ + K + EA + +EM+ G+ P Y L+D F +D+A + M C
Sbjct: 324 IDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGC 383
Query: 338 SPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMME 397
P+I ++ +++ Y A+ ++ + FR++ G V + +TY TLI+G+ ++ LE E
Sbjct: 384 GPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKE 443
Query: 398 IYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAK 457
++ +M ++P+ + ++D N + + A+ ++++E D NI++
Sbjct: 444 LFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMC 503
Query: 458 TADERNEANELLGNFNHPNNEPGINGLSISV 488
A + ++A +L + +P + +I +
Sbjct: 504 NASKVDDAWDLFCSLPLKGVKPDVKTYNIMI 534
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 94/392 (23%), Positives = 180/392 (45%), Gaps = 10/392 (2%)
Query: 59 PKDLVLGTLVRLKQLKKWNVVSEVLEWLRI--QSWWDFNEMDFLMLITAYGKQGDFNKAE 116
P ++ G + LK + K + +E LR + + + + ++I K G + A
Sbjct: 210 PNEVTYGPV--LKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAF 267
Query: 117 KVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLF 176
+ + M KG+ ++ +T L+ + GR+ + + R M P + + ++ F
Sbjct: 268 NLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCF 327
Query: 177 VEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQ 236
V+ K +EAEE+ ++ + + PD + +I + K +KA + LM +G
Sbjct: 328 VKEGKLREAEELHKEMI---QRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCG 384
Query: 237 QSTVTYNSLMSFETNYKEVS---KIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAV 293
+ T+N L++ + +++ +M G+ D V+Y LI + + + E A +
Sbjct: 385 PNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKEL 444
Query: 294 FEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVN 353
F+EM+ VRP +Y ILLD +G ++A +F+ + + + DI Y ++ N
Sbjct: 445 FQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCN 504
Query: 354 ASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTI 413
AS ++ A F L G P+V TY +I G K +L + ++ KM +G PN
Sbjct: 505 ASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCT 564
Query: 414 FTTIMDAYGKNKDFDSAVVWYKEMESCGFPPD 445
+ ++ A+ D + +E++ CGF D
Sbjct: 565 YNILIRAHLGEGDATKSAKLIEEIKRCGFSVD 596
>gi|115440343|ref|NP_001044451.1| Os01g0783100 [Oryza sativa Japonica Group]
gi|20804869|dbj|BAB92551.1| putative PPR protein [Oryza sativa Japonica Group]
gi|113533982|dbj|BAF06365.1| Os01g0783100 [Oryza sativa Japonica Group]
Length = 684
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 92/407 (22%), Positives = 180/407 (44%), Gaps = 44/407 (10%)
Query: 97 MDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRR 156
+ + +L+ A K F +A +VL M KG P++V++ ++ R GR +A R
Sbjct: 181 VTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREFLNR 240
Query: 157 MQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKK 216
+ S G +P ++Y +LK A ++++ EE+F ++++ P++ F M++ + +
Sbjct: 241 LSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKN---CMPNEVTFDMLVRFFCR 297
Query: 217 AGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSKIY---DQMQRAGLQPDVVS 273
G E+A ++ M+ G +T N +++ V + + M G PD +S
Sbjct: 298 GGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDTIS 357
Query: 274 YALLINAYGKARREEEALAVFEEMLDAGVRPTH--------------------------- 306
Y ++ +A R E+A + +EM+ P
Sbjct: 358 YTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQATMLIEQMS 417
Query: 307 --------KAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDME 358
YN L++ F + G VD A +F M C P+ +YTT+L+ NA ++
Sbjct: 418 EHGCEVNIVTYNALVNGFCVQGRVDSALELFYSM---PCKPNTITYTTLLTGLCNAERLD 474
Query: 359 GAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIM 418
A + + Q PNV+T+ L+ + + +++ +E+ ++M +G PN + T++
Sbjct: 475 AAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQMMEHGCTPNLITYNTLL 534
Query: 419 DAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEA 465
D K+ + + A+ + S G PD + ++ + D EA
Sbjct: 535 DGITKDCNSEEALELLHGLVSNGVSPDIVTYSSIIGVLSREDRVEEA 581
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 94/400 (23%), Positives = 187/400 (46%), Gaps = 4/400 (1%)
Query: 70 LKQLKKWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAP 129
L K+W V E+ + ++ NE+ F ML+ + + G +A +VL M+ G A
Sbjct: 260 LCAAKRWEDVEELFAEMMEKNCMP-NEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAA 318
Query: 130 SVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVF 189
+ ++ + GR +A M S G P ++Y +LK A ++++A+E+
Sbjct: 319 NTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELL 378
Query: 190 MTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFE 249
++ + P++ F+ I + + G E+A L M+E G + + VTYN+L++
Sbjct: 379 KEMV---RKNCPPNEVTFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGF 435
Query: 250 TNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAY 309
V + +P+ ++Y L+ A R + A + EML P +
Sbjct: 436 CVQGRVDSALELFYSMPCKPNTITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTF 495
Query: 310 NILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQ 369
N+L+ F G++D+A + + M C+P++ +Y T+L + E A + L
Sbjct: 496 NVLVSFFCQKGLMDEAIELVEQMMEHGCTPNLITYNTLLDGITKDCNSEEALELLHGLVS 555
Query: 370 DGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDS 429
+G P+++TY ++I ++ + +E+ ++++ ++ G++P I+ I+ A K + D
Sbjct: 556 NGVSPDIVTYSSIIGVLSREDRVEEAIKMFHIVQDLGMRPKAVIYNKILLALCKRCNTDG 615
Query: 430 AVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELL 469
A+ ++ M S G P++ L+ D E +LL
Sbjct: 616 AIDFFAYMVSNGCMPNELTYITLIEGLANEDFLKETRDLL 655
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 99/428 (23%), Positives = 180/428 (42%), Gaps = 51/428 (11%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
LI ++G + A +VL + G A V ++ L+ Y R G+ A RR+ +S
Sbjct: 84 LIRNLCRRGRTSDAARVLRAAERSGTAVDVFAYNTLVAGYCRYGQLDAA----RRLIASM 139
Query: 162 P-RPSALTYQIILKLFVEANKFKEAEEVFMTLLDEE-KSPLKPDQKMFHMMIYMYKKAGG 219
P P A TY I++ + + EA ++LLD+ +P + +++ K+ G
Sbjct: 140 PVAPDAYTYTPIIRGLCDRGRVGEA----LSLLDDMLHRGCQPSVVTYTVLLEAVCKSTG 195
Query: 220 YEKARKLFALMAERGVQQSTVTYNSL---MSFETNYKEVSKIYDQMQRAGLQPDVVSYAL 276
+ +A ++ M +G + VTYN + M E + + +++ G QPD VSY
Sbjct: 196 FGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREFLNRLSSYGFQPDTVSYTT 255
Query: 277 LINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQA----------- 325
++ A+R E+ +F EM++ P +++L+ F GMV++A
Sbjct: 256 VLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHG 315
Query: 326 ------------RTVFKCMRRD------------RCSPDICSYTTMLSAYVNASDMEGAE 361
T+ K R D CSPD SYTT+L A E A+
Sbjct: 316 CAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAK 375
Query: 362 KFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAY 421
+ + + + PN +T+ T I + +E+ + ++M +G + N + +++ +
Sbjct: 376 ELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGF 435
Query: 422 GKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGI 481
DSA+ + M P+ LL+ A+ + A ELL + P +
Sbjct: 436 CVQGRVDSALELFYSMPC---KPNTITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNV 492
Query: 482 NGLSISVD 489
++ V
Sbjct: 493 VTFNVLVS 500
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 89/375 (23%), Positives = 150/375 (40%), Gaps = 41/375 (10%)
Query: 111 DFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQ 170
D +A +++ +G AP V T L+ R GR +A + R + SG Y
Sbjct: 58 DLAEAARLVDRATSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAERSGTAVDVFAYN 117
Query: 171 IILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALM 230
++ + + A + ++ P+ PD + +I R L
Sbjct: 118 TLVAGYCRYGQLDAARRLIASM------PVAPDAYTYTPII------------RGL---- 155
Query: 231 AERGVQQSTVTYNSLMSFETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEA 290
+RG E + D M G QP VV+Y +L+ A K+ +A
Sbjct: 156 CDRG----------------RVGEALSLLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQA 199
Query: 291 LAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSA 350
+ V +EM G P YN++++ G VD AR + PD SYTT+L
Sbjct: 200 MEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKG 259
Query: 351 YVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPN 410
A E E+ F + + +PN +T+ L++ + + +E+ +++ ++M +G N
Sbjct: 260 LCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAAN 319
Query: 411 QTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLG 470
T+ +++ K D A + M S G PD + +L A+ +A ELL
Sbjct: 320 TTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLK 379
Query: 471 NF---NHPNNEPGIN 482
N P NE N
Sbjct: 380 EMVRKNCPPNEVTFN 394
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 80/341 (23%), Positives = 159/341 (46%), Gaps = 45/341 (13%)
Query: 70 LKQLKKWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAP 129
L + ++W E+L+ + ++ NE+ F I ++G +A ++ M++ G
Sbjct: 365 LCRAERWEDAKELLKEM-VRKNCPPNEVTFNTFICILCQKGLIEQATMLIEQMSEHGCEV 423
Query: 130 SVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVF 189
++V++ AL+ + GR +A +F M +P+ +TY +L A + A E+
Sbjct: 424 NIVTYNALVNGFCVQGRVDSALELFYSMPC---KPNTITYTTLLTGLCNAERLDAAAELL 480
Query: 190 MTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLM--- 246
+L ++ +P + F++++ + + G ++A +L M E G + +TYN+L+
Sbjct: 481 AEMLQKDCAP---NVVTFNVLVSFFCQKGLMDEAIELVEQMMEHGCTPNLITYNTLLDGI 537
Query: 247 SFETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTH 306
+ + N +E ++ + G+ PD+V+Y+ +I + R EEA+ +F + D G+RP
Sbjct: 538 TKDCNSEEALELLHGLVSNGVSPDIVTYSSIIGVLSREDRVEEAIKMFHIVQDLGMRPKA 597
Query: 307 KAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRR 366
YN +L A RC+ D GA FF
Sbjct: 598 VIYNKILLALC-----------------KRCNTD------------------GAIDFFAY 622
Query: 367 LKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGI 407
+ +G +PN +TY TLI+G A + L++ ++ ++ G+
Sbjct: 623 MVSNGCMPNELTYITLIEGLANEDFLKETRDLLRELCSRGV 663
>gi|125575133|gb|EAZ16417.1| hypothetical protein OsJ_31886 [Oryza sativa Japonica Group]
Length = 678
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 93/344 (27%), Positives = 165/344 (47%), Gaps = 6/344 (1%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
+I K G NKA VL M G P +S L+ RGG+ +A + M+ SG
Sbjct: 257 IIRGLVKTGKANKARHVLEVMVLSGGVPDTISCNMLIAQLCRGGQLSSALQVLEDMRFSG 316
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
PS +T+ +++ + A + ++ + P + +++ + K G +
Sbjct: 317 CSPSGITFNTLIRCMFNQRMYDRAISFWK---EQLRLGWPPYEMTSTLLVDLVCKNCGPQ 373
Query: 222 KARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSK---IYDQMQRAGLQPDVVSYALLI 278
KA ++ ++ G Q VTYN+L+S ++ I ++ GL+P+ +Y +L+
Sbjct: 374 KALEVLDELSLEGCQPDVVTYNALISASCKAGRLNDAKFILTRLAAEGLEPNGTTYCILL 433
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCS 338
+A RR +E + E+M P YNI ++ F G +DQA V + M + CS
Sbjct: 434 HALCNMRRWDEVCDLLEDMNQVNRDPDVTTYNIFINYFCKYGHLDQAIDVLERMVINNCS 493
Query: 339 PDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEI 398
PDI + T+L+A +E A R ++++G+ +ITY TLI AK ++K M +
Sbjct: 494 PDIVTCNTLLNAISKKGMVEEALGIARCIRENGYKLVLITYNTLIDALAKKAEVKKAMVL 553
Query: 399 YDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGF 442
+D+M +GI P+ + +++ + K D A+ +M + GF
Sbjct: 554 FDEMLSDGISPDDITYGSLVMGFCKKDMADEALDLLNQMLTLGF 597
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 95/406 (23%), Positives = 163/406 (40%), Gaps = 46/406 (11%)
Query: 40 EVGSAVAVLRSERTRGQPLPKDLVLGTLVR--LKQLKKWNVVSEVLEWLRIQSWWDFNEM 97
++ SA+ VL R G P + TL+R Q +S E LR+ W EM
Sbjct: 301 QLSSALQVLEDMRFSGCS-PSGITFNTLIRCMFNQRMYDRAISFWKEQLRLG--WPPYEM 357
Query: 98 DFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRM 157
+L+ K KA +VL ++ +G P VV++ AL+ A + GR +A+ I R+
Sbjct: 358 TSTLLVDLVCKNCGPQKALEVLDELSLEGCQPDVVTYNALISASCKAGRLNDAKFILTRL 417
Query: 158 QSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKA 217
+ G P+ TY I+L ++ +EV L D + PD
Sbjct: 418 AAEGLEPNGTTYCILLHALCNMRRW---DEVCDLLEDMNQVNRDPD-------------- 460
Query: 218 GGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSKIYDQMQRA---GLQPDVVSY 274
TYN +++ Y + + D ++R PD+V+
Sbjct: 461 ---------------------VTTYNIFINYFCKYGHLDQAIDVLERMVINNCSPDIVTC 499
Query: 275 ALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRR 334
L+NA K EEAL + + + G + YN L+DA A V +A +F M
Sbjct: 500 NTLLNAISKKGMVEEALGIARCIRENGYKLVLITYNTLIDALAKKAEVKKAMVLFDEMLS 559
Query: 335 DRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEK 394
D SPD +Y +++ + + A ++ GF T+ +I+ + +E
Sbjct: 560 DGISPDDITYGSLVMGFCKKDMADEALDLLNQMLTLGFEVKTTTFVMVIQALCRDGKVEA 619
Query: 395 MMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESC 440
EI M P ++ ++I+ K+ A + ++++ C
Sbjct: 620 AAEITKVMLSKNSIPGNSLCSSIVTKVAKSGWNKEAQMLHQKLVEC 665
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 51/236 (21%), Positives = 99/236 (41%)
Query: 254 EVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILL 313
+ + D+M G P+ +I K + +A V E M+ +G P + N+L+
Sbjct: 234 QACCVIDEMVLHGQIPETKCCVRIIRGLVKTGKANKARHVLEVMVLSGGVPDTISCNMLI 293
Query: 314 DAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFV 373
G + A V + MR CSP ++ T++ N + A F++ + G+
Sbjct: 294 AQLCRGGQLSSALQVLEDMRFSGCSPSGITFNTLIRCMFNQRMYDRAISFWKEQLRLGWP 353
Query: 374 PNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVW 433
P +T L+ K +K +E+ D++ + G +P+ + ++ A K + A
Sbjct: 354 PYEMTSTLLVDLVCKNCGPQKALEVLDELSLEGCQPDVVTYNALISASCKAGRLNDAKFI 413
Query: 434 YKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGINGLSISVD 489
+ + G P+ ILL +E +LL + N N +P + +I ++
Sbjct: 414 LTRLAAEGLEPNGTTYCILLHALCNMRRWDEVCDLLEDMNQVNRDPDVTTYNIFIN 469
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/224 (22%), Positives = 91/224 (40%)
Query: 258 IYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFA 317
+ + M +G PD +S +LI + + AL V E+M +G P+ +N L+
Sbjct: 273 VLEVMVLSGGVPDTISCNMLIAQLCRGGQLSSALQVLEDMRFSGCSPSGITFNTLIRCMF 332
Query: 318 ISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVI 377
M D+A + +K R P + T ++ + A + L +G P+V+
Sbjct: 333 NQRMYDRAISFWKEQLRLGWPPYEMTSTLLVDLVCKNCGPQKALEVLDELSLEGCQPDVV 392
Query: 378 TYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEM 437
TY LI K L I ++ G++PN T + ++ A + +D ++M
Sbjct: 393 TYNALISASCKAGRLNDAKFILTRLAAEGLEPNGTTYCILLHALCNMRRWDEVCDLLEDM 452
Query: 438 ESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGI 481
PD NI ++ ++A ++L N P I
Sbjct: 453 NQVNRDPDVTTYNIFINYFCKYGHLDQAIDVLERMVINNCSPDI 496
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/216 (22%), Positives = 86/216 (39%), Gaps = 2/216 (0%)
Query: 273 SYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCM 332
YA + Y + + +A V +EM+ G P K ++ +G ++AR V + M
Sbjct: 218 CYADNLRRYCNSGKLIQACCVIDEMVLHGQIPETKCCVRIIRGLVKTGKANKARHVLEVM 277
Query: 333 RRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNL 392
PD S +++ + A + ++ G P+ IT+ TLI+
Sbjct: 278 VLSGGVPDTISCNMLIAQLCRGGQLSSALQVLEDMRFSGCSPSGITFNTLIRCMFNQRMY 337
Query: 393 EKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNIL 452
++ + + + G P + T ++D KN A+ E+ G PD N L
Sbjct: 338 DRAISFWKEQLRLGWPPYEMTSTLLVDLVCKNCGPQKALEVLDELSLEGCQPDVVTYNAL 397
Query: 453 LSLAKTADERNEANELLGNFNHPNNEPGINGLSISV 488
+S + A N+A +L EP NG + +
Sbjct: 398 ISASCKAGRLNDAKFILTRLAAEGLEP--NGTTYCI 431
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/175 (21%), Positives = 69/175 (39%)
Query: 307 KAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRR 366
K Y L + SG + QA V M P+ ++ V A
Sbjct: 217 KCYADNLRRYCNSGKLIQACCVIDEMVLHGQIPETKCCVRIIRGLVKTGKANKARHVLEV 276
Query: 367 LKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKD 426
+ G VP+ I+ LI + L +++ + MR +G P+ F T++ +
Sbjct: 277 MVLSGGVPDTISCNMLIAQLCRGGQLSSALQVLEDMRFSGCSPSGITFNTLIRCMFNQRM 336
Query: 427 FDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGI 481
+D A+ ++KE G+PP + +L+ L +A E+L + +P +
Sbjct: 337 YDRAISFWKEQLRLGWPPYEMTSTLLVDLVCKNCGPQKALEVLDELSLEGCQPDV 391
>gi|242069905|ref|XP_002450229.1| hypothetical protein SORBIDRAFT_05g002220 [Sorghum bicolor]
gi|241936072|gb|EES09217.1| hypothetical protein SORBIDRAFT_05g002220 [Sorghum bicolor]
Length = 797
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 102/432 (23%), Positives = 197/432 (45%), Gaps = 14/432 (3%)
Query: 57 PLPKDLVLGTLVRLKQLKKWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAE 116
P +++G R+ +L+ ++ ++S W N + L+ +A
Sbjct: 94 PCTYSILIGCFCRMGRLEHGFATFGLI----LKSGWRVNNIVINQLLKGLCDAKRLCEAM 149
Query: 117 KVL-SFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPR---PSALTYQII 172
+L M + G P VVS+ L++ + R + A + M S R P+ ++Y I+
Sbjct: 150 DILVKRMPELGCTPDVVSYNTLLKGFCNEKRAEEALELLHMMADSQGRSCPPNVVSYAIV 209
Query: 173 LKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAE 232
+ F + +A +F+ ++D ++P+ + +I KA ++A +F M +
Sbjct: 210 INGFFTEGQVDKAYNLFLEMMDR---GIQPNVVTYTTVIDGLCKAQVVDRAEGVFQQMID 266
Query: 233 RGVQQSTVTYNSLMSFETN---YKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEE 289
+GV+ TYN L+ + +KEV ++ ++M GL+PD +Y L+N R E
Sbjct: 267 KGVKPDNDTYNCLIHGYLSIGKWKEVVRMLEEMSAHGLKPDCYTYGSLLNYLCNNGRCRE 326
Query: 290 ALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLS 349
A +F+ M+ G++P Y IL+ +A G + + + M + SPD + + +
Sbjct: 327 ARFLFDSMIRKGIKPNVAIYGILIHGYATKGALSEMHDLLNLMVENGLSPDHHIFNIIFT 386
Query: 350 AYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKP 409
AY + ++ A F ++KQ G P+V+ YG LI K+ ++ + +++M G+ P
Sbjct: 387 AYAKKAMIDEAMHIFNKMKQQGLSPDVVNYGALIDALCKLGRVDDAVLKFNQMMNEGVAP 446
Query: 410 NQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELL 469
N +F +++ ++ A +Y EM + G PD N +L T + +A L+
Sbjct: 447 NIFVFNSLVYGLCTVDKWEKAKEFYFEMLNQGIRPDVVFFNTILCNLCTKGQVMKAQRLI 506
Query: 470 GNFNHPNNEPGI 481
PG+
Sbjct: 507 DLMERVGTRPGV 518
Score = 142 bits (357), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 94/380 (24%), Positives = 174/380 (45%), Gaps = 6/380 (1%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + + +I K ++AE V M KG P ++ L+ Y G++K +
Sbjct: 237 NVVTYTTVIDGLCKAQVVDRAEGVFQQMIDKGVKPDNDTYNCLIHGYLSIGKWKEVVRML 296
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
M + G +P TY +L + +EA +F +++ + +KP+ ++ ++I+ Y
Sbjct: 297 EEMSAHGLKPDCYTYGSLLNYLCNNGRCREARFLFDSMI---RKGIKPNVAIYGILIHGY 353
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSLMSF---ETNYKEVSKIYDQMQRAGLQPDV 271
G + L LM E G+ +N + + + E I+++M++ GL PDV
Sbjct: 354 ATKGALSEMHDLLNLMVENGLSPDHHIFNIIFTAYAKKAMIDEAMHIFNKMKQQGLSPDV 413
Query: 272 VSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKC 331
V+Y LI+A K R ++A+ F +M++ GV P +N L+ ++A+ +
Sbjct: 414 VNYGALIDALCKLGRVDDAVLKFNQMMNEGVAPNIFVFNSLVYGLCTVDKWEKAKEFYFE 473
Query: 332 MRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNN 391
M PD+ + T+L + A++ +++ G P VI+Y TLI G+ V
Sbjct: 474 MLNQGIRPDVVFFNTILCNLCTKGQVMKAQRLIDLMERVGTRPGVISYTTLIGGHCLVGR 533
Query: 392 LEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNI 451
+++ + D M G+KP++ + T++ Y + D A ++EM G P +
Sbjct: 534 IDEAAKSLDVMLSVGLKPDEWTYNTLLHGYCRAGRIDDAYGVFREMLRNGITPGVVTYST 593
Query: 452 LLSLAKTADERNEANELLGN 471
+L T +EA EL N
Sbjct: 594 ILHGLFTTRRFSEAKELYLN 613
Score = 138 bits (347), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 93/351 (26%), Positives = 166/351 (47%), Gaps = 14/351 (3%)
Query: 107 GKQGDFNKAEKVLSFMNKK------GYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSS 160
G++ ++E V+S N+ P +++ L+ + R GR ++ A F + S
Sbjct: 64 GRRSSTTESELVVSLFNRMIRECTIKVTPDPCTYSILIGCFCRMGRLEHGFATFGLILKS 123
Query: 161 GPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGY 220
G R + + +LK +A + EA ++ + + E PD ++ ++ +
Sbjct: 124 GWRVNNIVINQLLKGLCDAKRLCEAMDILVKRMPELGC--TPDVVSYNTLLKGFCNEKRA 181
Query: 221 EKARKLFALMAE---RGVQQSTVTYNSLMSFETNYKEVSKIYD---QMQRAGLQPDVVSY 274
E+A +L +MA+ R + V+Y +++ +V K Y+ +M G+QP+VV+Y
Sbjct: 182 EEALELLHMMADSQGRSCPPNVVSYAIVINGFFTEGQVDKAYNLFLEMMDRGIQPNVVTY 241
Query: 275 ALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRR 334
+I+ KA+ + A VF++M+D GV+P + YN L+ + G + + + M
Sbjct: 242 TTVIDGLCKAQVVDRAEGVFQQMIDKGVKPDNDTYNCLIHGYLSIGKWKEVVRMLEEMSA 301
Query: 335 DRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEK 394
PD +Y ++L+ N A F + + G PNV YG LI GYA L +
Sbjct: 302 HGLKPDCYTYGSLLNYLCNNGRCREARFLFDSMIRKGIKPNVAIYGILIHGYATKGALSE 361
Query: 395 MMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPD 445
M ++ + M NG+ P+ IF I AY K D A+ + +M+ G PD
Sbjct: 362 MHDLLNLMVENGLSPDHHIFNIIFTAYAKKAMIDEAMHIFNKMKQQGLSPD 412
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 80/348 (22%), Positives = 161/348 (46%), Gaps = 6/348 (1%)
Query: 101 MLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSS 160
+LI Y +G ++ +L+ M + G +P + AY + A IF +M+
Sbjct: 348 ILIHGYATKGALSEMHDLLNLMVENGLSPDHHIFNIIFTAYAKKAMIDEAMHIFNKMKQQ 407
Query: 161 GPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGY 220
G P + Y ++ + + +A F +++E + P+ +F+ ++Y +
Sbjct: 408 GLSPDVVNYGALIDALCKLGRVDDAVLKFNQMMNE---GVAPNIFVFNSLVYGLCTVDKW 464
Query: 221 EKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSK---IYDQMQRAGLQPDVVSYALL 277
EKA++ + M +G++ V +N+++ +V K + D M+R G +P V+SY L
Sbjct: 465 EKAKEFYFEMLNQGIRPDVVFFNTILCNLCTKGQVMKAQRLIDLMERVGTRPGVISYTTL 524
Query: 278 INAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRC 337
I + R +EA + ML G++P YN LL + +G +D A VF+ M R+
Sbjct: 525 IGGHCLVGRIDEAAKSLDVMLSVGLKPDEWTYNTLLHGYCRAGRIDDAYGVFREMLRNGI 584
Query: 338 SPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMME 397
+P + +Y+T+L A++ + + G N+ Y ++ G +K N +++ +
Sbjct: 585 TPGVVTYSTILHGLFTTRRFSEAKELYLNMITSGKQWNIWIYNIILNGLSKNNCVDEAFK 644
Query: 398 IYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPD 445
++ + + T F ++ A K+ + A+ + + S G PD
Sbjct: 645 LFQSLCSKDFQLEITTFNIMIGALFKSGRNEDAMHLFATISSYGLVPD 692
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 86/408 (21%), Positives = 179/408 (43%), Gaps = 41/408 (10%)
Query: 99 FLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQ 158
F ++ TAY K+ ++A + + M ++G +P VV++ AL++A + GR +A F +M
Sbjct: 381 FNIIFTAYAKKAMIDEAMHIFNKMKQQGLSPDVVNYGALIDALCKLGRVDDAVLKFNQMM 440
Query: 159 SSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAG 218
+ G P+ + ++ +K+++A+E + +L++ ++PD F+ ++ G
Sbjct: 441 NEGVAPNIFVFNSLVYGLCTVDKWEKAKEFYFEMLNQ---GIRPDVVFFNTILCNLCTKG 497
Query: 219 GYEKARKLFALMAERGVQQSTVTYNSLM-------------------------------- 246
KA++L LM G + ++Y +L+
Sbjct: 498 QVMKAQRLIDLMERVGTRPGVISYTTLIGGHCLVGRIDEAAKSLDVMLSVGLKPDEWTYN 557
Query: 247 SFETNYKEVSKI------YDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDA 300
+ Y +I + +M R G+ P VV+Y+ +++ RR EA ++ M+ +
Sbjct: 558 TLLHGYCRAGRIDDAYGVFREMLRNGITPGVVTYSTILHGLFTTRRFSEAKELYLNMITS 617
Query: 301 GVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGA 360
G + YNI+L+ + + VD+A +F+ + +I ++ M+ A + E A
Sbjct: 618 GKQWNIWIYNIILNGLSKNNCVDEAFKLFQSLCSKDFQLEITTFNIMIGALFKSGRNEDA 677
Query: 361 EKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDA 420
F + G VP+V TY + + + LE+ +++ M +G PN + ++
Sbjct: 678 MHLFATISSYGLVPDVFTYCLIAENLIEEGYLEEFDDLFSAMEKSGTTPNSRMLNALVRR 737
Query: 421 YGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANEL 468
D A + +++ F + +L+SL + + A L
Sbjct: 738 LLHRGDITRAGAYLCKLDEKNFSLEASTTAMLISLLSRDEYHHHATSL 785
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/232 (24%), Positives = 104/232 (44%), Gaps = 6/232 (2%)
Query: 97 MDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRR 156
+ + LI + G ++A K L M G P ++ L+ Y R GR +A +FR
Sbjct: 519 ISYTTLIGGHCLVGRIDEAAKSLDVMLSVGLKPDEWTYNTLLHGYCRAGRIDDAYGVFRE 578
Query: 157 MQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKK 216
M +G P +TY IL +F EA+E+++ ++ K + + ++++++ K
Sbjct: 579 MLRNGITPGVVTYSTILHGLFTTRRFSEAKELYLNMITSGK---QWNIWIYNIILNGLSK 635
Query: 217 AGGYEKARKLFALMAERGVQQSTVTYNSLMS--FETNYKE-VSKIYDQMQRAGLQPDVVS 273
++A KLF + + Q T+N ++ F++ E ++ + GL PDV +
Sbjct: 636 NNCVDEAFKLFQSLCSKDFQLEITTFNIMIGALFKSGRNEDAMHLFATISSYGLVPDVFT 695
Query: 274 YALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQA 325
Y L+ + EE +F M +G P + N L+ G + +A
Sbjct: 696 YCLIAENLIEEGYLEEFDDLFSAMEKSGTTPNSRMLNALVRRLLHRGDITRA 747
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 84/182 (46%), Gaps = 11/182 (6%)
Query: 92 WDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAE 151
W +N L+ Y + G + A V M + G P VV+++ ++ R+ A+
Sbjct: 554 WTYNT-----LLHGYCRAGRIDDAYGVFREMLRNGITPGVVTYSTILHGLFTTRRFSEAK 608
Query: 152 AIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMI 211
++ M +SG + + Y IIL + N EA ++F +L ++ + + F++MI
Sbjct: 609 ELYLNMITSGKQWNIWIYNIILNGLSKNNCVDEAFKLFQSLCSKD---FQLEITTFNIMI 665
Query: 212 YMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMS--FETNY-KEVSKIYDQMQRAGLQ 268
K+G E A LFA ++ G+ TY + E Y +E ++ M+++G
Sbjct: 666 GALFKSGRNEDAMHLFATISSYGLVPDVFTYCLIAENLIEEGYLEEFDDLFSAMEKSGTT 725
Query: 269 PD 270
P+
Sbjct: 726 PN 727
Score = 44.7 bits (104), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 34/175 (19%), Positives = 71/175 (40%), Gaps = 21/175 (12%)
Query: 74 KKWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVS 133
K+WN+ W +N +++ K ++A K+ + K + + +
Sbjct: 619 KQWNI-------------WIYN-----IILNGLSKNNCVDEAFKLFQSLCSKDFQLEITT 660
Query: 134 HTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLL 193
++ A + GR ++A +F + S G P TY +I + +E +E +++F +
Sbjct: 661 FNIMIGALFKSGRNEDAMHLFATISSYGLVPDVFTYCLIAENLIEEGYLEEFDDLFSAM- 719
Query: 194 DEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSF 248
EKS P+ +M + ++ G +A + E+ T L+S
Sbjct: 720 --EKSGTTPNSRMLNALVRRLLHRGDITRAGAYLCKLDEKNFSLEASTTAMLISL 772
>gi|356564530|ref|XP_003550506.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g11690-like [Glycine max]
Length = 556
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 97/411 (23%), Positives = 201/411 (48%), Gaps = 25/411 (6%)
Query: 89 QSWWDFNEM---------DFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALME 139
++WW FN + F ++IT + G F + ++L+ + + G +P+VV +T L++
Sbjct: 142 KAWWIFNVLKSKVVLNAYSFGIMITGCCEAGYFVRVFRLLAVLEEFGLSPNVVIYTTLID 201
Query: 140 AYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSP 199
+ G A+ +F +M G P+ TY +++ F + +E +++ + +S
Sbjct: 202 GCCKNGDVMLAKNLFCKMDRLGLVPNQHTYSVLMNGFFKQGLQREGFQMYENM---NRSG 258
Query: 200 LKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFET---NYKEVS 256
+ P+ ++ +I Y G +KA K+FA M E+G+ +TYN L+ + E
Sbjct: 259 IVPNAYAYNCLISEYCNDGMVDKAFKVFAEMREKGIACGVMTYNILIGGLCRGKKFGEAV 318
Query: 257 KIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAF 316
K+ ++ + GL P++V+Y +LIN + + + A+ +F ++ +G+ PT YN L+ +
Sbjct: 319 KLVHKVNKVGLSPNIVTYNILINGFCDVGKMDTAVRLFNQLKSSGLSPTLVTYNTLIAGY 378
Query: 317 A----ISGMVDQARTVF-KCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDG 371
+ ++G +D + + +C+ R + + YT ++ A+ + + A + +++ G
Sbjct: 379 SKVENLAGALDLVKEMEERCIARSKVT-----YTILIDAFARLNYTDKACEMHSLMEKSG 433
Query: 372 FVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAV 431
VP+V TY LI G N+++ + + + ++PN I+ T++ Y K A+
Sbjct: 434 LVPDVYTYSVLIHGXCVNGNMKEASKPFKSLGEMHLQPNSVIYNTMIHGYCKEGSSYRAL 493
Query: 432 VWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGIN 482
EM G P+ + + L ++ EA LLG + +P ++
Sbjct: 494 RLLNEMVHSGMVPNVASFCSTMGLLCRDEKWKEAELLLGQMINSGLKPSVS 544
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 96/371 (25%), Positives = 166/371 (44%), Gaps = 45/371 (12%)
Query: 121 FMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEAN 180
F + Y P + A++ AY A M G P + T+ +L L + +N
Sbjct: 82 FTSCSTYTPL---YDAIVNAYVHSHSTDQALTFLHHMIHEGHAPLSNTFNNLLCLLIRSN 138
Query: 181 KFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTV 240
F +A +F L KS + + F +MI +AG + + +L A++ E G+ + V
Sbjct: 139 YFDKAWWIFNVL----KSKVVLNAYSFGIMITGCCEAGYFVRVFRLLAVLEEFGLSPNVV 194
Query: 241 TYNSLMSFETNYKEV---SKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEM 297
Y +L+ +V ++ +M R GL P+ +Y++L+N + K + E ++E M
Sbjct: 195 IYTTLIDGCCKNGDVMLAKNLFCKMDRLGLVPNQHTYSVLMNGFFKQGLQREGFQMYENM 254
Query: 298 LDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRD--RC------------------ 337
+G+ P AYN L+ + GMVD+A VF MR C
Sbjct: 255 NRSGIVPNAYAYNCLISEYCNDGMVDKAFKVFAEMREKGIACGVMTYNILIGGLCRGKKF 314
Query: 338 ---------------SPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTL 382
SP+I +Y +++ + + M+ A + F +LK G P ++TY TL
Sbjct: 315 GEAVKLVHKVNKVGLSPNIVTYNILINGFCDVGKMDTAVRLFNQLKSSGLSPTLVTYNTL 374
Query: 383 IKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGF 442
I GY+KV NL +++ +M I ++ +T ++DA+ + D A + ME G
Sbjct: 375 IAGYSKVENLAGALDLVKEMEERCIARSKVTYTILIDAFARLNYTDKACEMHSLMEKSGL 434
Query: 443 PPDQKAKNILL 453
PD ++L+
Sbjct: 435 VPDVYTYSVLI 445
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 72/281 (25%), Positives = 130/281 (46%), Gaps = 6/281 (2%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
LI+ Y G +KA KV + M +KG A V+++ L+ RG ++ A + ++ G
Sbjct: 269 LISEYCNDGMVDKAFKVFAEMREKGIACGVMTYNILIGGLCRGKKFGEAVKLVHKVNKVG 328
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
P+ +TY I++ F + K A +F L + S L P ++ +I Y K
Sbjct: 329 LSPNIVTYNILINGFCDVGKMDTAVRLFNQL---KSSGLSPTLVTYNTLIAGYSKVENLA 385
Query: 222 KARKLFALMAERGVQQSTVTYNSLM-SF-ETNYKE-VSKIYDQMQRAGLQPDVVSYALLI 278
A L M ER + +S VTY L+ +F NY + +++ M+++GL PDV +Y++LI
Sbjct: 386 GALDLVKEMEERCIARSKVTYTILIDAFARLNYTDKACEMHSLMEKSGLVPDVYTYSVLI 445
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCS 338
+ +EA F+ + + ++P YN ++ + G +A + M
Sbjct: 446 HGXCVNGNMKEASKPFKSLGEMHLQPNSVIYNTMIHGYCKEGSSYRALRLLNEMVHSGMV 505
Query: 339 PDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITY 379
P++ S+ + + + AE ++ G P+V Y
Sbjct: 506 PNVASFCSTMGLLCRDEKWKEAELLLGQMINSGLKPSVSLY 546
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 58/259 (22%), Positives = 97/259 (37%), Gaps = 34/259 (13%)
Query: 274 YALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMR 333
Y ++NAY + ++AL M+ G P +N LL S D+A +F ++
Sbjct: 92 YDAIVNAYVHSHSTDQALTFLHHMIHEGHAPLSNTFNNLLCLLIRSNYFDKAWWIFNVLK 151
Query: 334 R-------------DRC---------------------SPDICSYTTMLSAYVNASDMEG 359
C SP++ YTT++ D+
Sbjct: 152 SKVVLNAYSFGIMITGCCEAGYFVRVFRLLAVLEEFGLSPNVVIYTTLIDGCCKNGDVML 211
Query: 360 AEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMD 419
A+ F ++ + G VPN TY L+ G+ K + ++Y+ M +GI PN + ++
Sbjct: 212 AKNLFCKMDRLGLVPNQHTYSVLMNGFFKQGLQREGFQMYENMNRSGIVPNAYAYNCLIS 271
Query: 420 AYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEP 479
Y + D A + EM G NIL+ + EA +L+ N P
Sbjct: 272 EYCNDGMVDKAFKVFAEMREKGIACGVMTYNILIGGLCRGKKFGEAVKLVHKVNKVGLSP 331
Query: 480 GINGLSISVDEEDDDDDDD 498
I +I ++ D D
Sbjct: 332 NIVTYNILINGFCDVGKMD 350
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 84/179 (46%), Gaps = 6/179 (3%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
LI Y K + A ++ M ++ A S V++T L++A+ R A + M+ SG
Sbjct: 374 LIAGYSKVENLAGALDLVKEMEERCIARSKVTYTILIDAFARLNYTDKACEMHSLMEKSG 433
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
P TY +++ KEA + F +L + L+P+ +++ MI+ Y K G
Sbjct: 434 LVPDVYTYSVLIHGXCVNGNMKEASKPFKSLGEMH---LQPNSVIYNTMIHGYCKEGSSY 490
Query: 222 KARKLFALMAERGVQQSTVTYNSLMSF---ETNYKEVSKIYDQMQRAGLQPDVVSYALL 277
+A +L M G+ + ++ S M + +KE + QM +GL+P V Y ++
Sbjct: 491 RALRLLNEMVHSGMVPNVASFCSTMGLLCRDEKWKEAELLLGQMINSGLKPSVSLYKMV 549
Score = 43.9 bits (102), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 44/81 (54%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + + +I Y K+G +A ++L+ M G P+V S + M R ++K AE +
Sbjct: 472 NSVIYNTMIHGYCKEGSSYRALRLLNEMVHSGMVPNVASFCSTMGLLCRDEKWKEAELLL 531
Query: 155 RRMQSSGPRPSALTYQIILKL 175
+M +SG +PS Y+++ K+
Sbjct: 532 GQMINSGLKPSVSLYKMVHKV 552
>gi|224093190|ref|XP_002309826.1| predicted protein [Populus trichocarpa]
gi|222852729|gb|EEE90276.1| predicted protein [Populus trichocarpa]
Length = 1480
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 112/437 (25%), Positives = 188/437 (43%), Gaps = 79/437 (18%)
Query: 56 QPLPKDLVLGTLVRLKQLKKWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGK------- 108
Q P DL +V+ + W+ EV EWL ++ W+ N +++ GK
Sbjct: 182 QMTPTDLCF--VVKSVGQESWHRALEVYEWLNLRHWYSPNARMLSTILSVLGKANQEALA 239
Query: 109 ---------------------------QGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAY 141
+G FNK +++L M ++G P +VS L+ A
Sbjct: 240 VEVFMRAEPSAGNTVQVYNAMMGVYARRGRFNKVQELLDLMRERGCKPDLVSFNTLINAR 299
Query: 142 GRGGRYKNAEAI--FRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSP 199
+ G AI ++ SG RP +TY ++ A+ +EA +VF D E
Sbjct: 300 LKAGAMMPNLAIELLNEVRRSGLRPDTITYNTLISACSRASNLEEAAKVFD---DMEAHH 356
Query: 200 LKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLM---SFETNYKEVS 256
+PD ++ MI +Y + G KA +LF + RG V+YNSL+ + E N ++V
Sbjct: 357 CQPDLWTYNAMISVYGRCGLSGKAEQLFNDLESRGFFPDAVSYNSLLYAFAREGNVEKVK 416
Query: 257 KIYDQM-----------------------------------QRAGLQPDVVSYALLINAY 281
+I+++M Q +G PD V+Y +LI++
Sbjct: 417 EIWEEMVKIGFGKDEMTYNTMIHMYGKQGQNELALQLYRDMQSSGRNPDAVTYTVLIDSL 476
Query: 282 GKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDI 341
GK + EA V EML+ GV+PT K Y+ L+ +A +G +A F CM R PD
Sbjct: 477 GKTNKIAEAAGVMSEMLNTGVKPTLKTYSALICGYAKAGKPVEAEETFDCMLRSGIRPDH 536
Query: 342 CSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDK 401
+Y+ ML ++ ++ + A ++ + DG + Y +++ KVN +E + +
Sbjct: 537 LAYSVMLDIHLRFNEPKRAMTLYKEMLHDGITLDHSLYELMLRTLRKVNKVEDIGRVIRD 596
Query: 402 MRVNGIKPNQTIFTTIM 418
M QTI + ++
Sbjct: 597 MEEICGMNTQTISSILV 613
Score = 131 bits (330), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 101/424 (23%), Positives = 181/424 (42%), Gaps = 50/424 (11%)
Query: 93 DFNEMDFLML---------ITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGR 143
DF E D ++L I AYG+ + KAE V + ++ AL+EAY
Sbjct: 766 DFAESDGILLNNISLYVNVIEAYGRLKLWQKAESVAGNLRQRCITVDRKVWNALIEAYAA 825
Query: 144 GGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPD 203
G Y+ A AIF M GP P+ T +L+ + + +E+++ + + + K
Sbjct: 826 SGCYERARAIFNTMMRDGPSPTVDTINGLLQALIVDGRL---DELYVVVQELQDMGFKIS 882
Query: 204 QKMFHMM---------------IYMYKKAGGYEKARKLFALMA----------------- 231
+ +M IY KA GY L+ +MA
Sbjct: 883 KSSILLMLDAFARAGNIFEVKKIYHGMKAAGYFPTMHLYRVMARLLSRGKQVRDVEAMLS 942
Query: 232 ---ERGVQQSTVTYNSLMSFET---NYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKAR 285
E G + +NS++ ++++ ++Y +++ GL+PD +Y LI Y +
Sbjct: 943 EMEEAGFKPDLSIWNSVLKMYVAIEDFRKTIQVYQRIKEDGLEPDEDTYNTLIVMYCRDH 1002
Query: 286 REEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYT 345
R EE ++ EM AG+ P Y L+ +F +V+QA +F+ ++ C D Y
Sbjct: 1003 RPEEGFSLMHEMRVAGLEPKLDTYKSLVASFGKQQLVEQAEELFEELQSKGCKLDRSFYH 1062
Query: 346 TMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVN 405
TM+ Y N+ AE+ F +K G P + T L+ Y ++ ++ ++
Sbjct: 1063 TMMKIYRNSGSHSKAERLFSMMKDAGVEPTIATMHLLMVSYGSSGQPQEAEKVLSNLKET 1122
Query: 406 GIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEA 465
G + +++++DAY +N D++ + +M+ G PD + + A + +EA
Sbjct: 1123 GSNLSTLPYSSVIDAYLRNGDYNIGIQKLIQMKKEGLEPDHRIWTCFIRAASLSRRTSEA 1182
Query: 466 NELL 469
LL
Sbjct: 1183 IVLL 1186
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 79/263 (30%), Positives = 137/263 (52%), Gaps = 7/263 (2%)
Query: 202 PDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSF---ETNYKEVSKI 258
P+ +M ++ + KA A ++F + AE + YN++M + +V ++
Sbjct: 218 PNARMLSTILSVLGKANQEALAVEVF-MRAEPSAGNTVQVYNAMMGVYARRGRFNKVQEL 276
Query: 259 YDQMQRAGLQPDVVSYALLINAYGKARREEEALAV--FEEMLDAGVRPTHKAYNILLDAF 316
D M+ G +PD+VS+ LINA KA LA+ E+ +G+RP YN L+ A
Sbjct: 277 LDLMRERGCKPDLVSFNTLINARLKAGAMMPNLAIELLNEVRRSGLRPDTITYNTLISAC 336
Query: 317 AISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNV 376
+ + +++A VF M C PD+ +Y M+S Y AE+ F L+ GF P+
Sbjct: 337 SRASNLEEAAKVFDDMEAHHCQPDLWTYNAMISVYGRCGLSGKAEQLFNDLESRGFFPDA 396
Query: 377 ITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKE 436
++Y +L+ +A+ N+EK+ EI+++M G ++ + T++ YGK + A+ Y++
Sbjct: 397 VSYNSLLYAFAREGNVEKVKEIWEEMVKIGFGKDEMTYNTMIHMYGKQGQNELALQLYRD 456
Query: 437 MESCGFPPDQKAKNILL-SLAKT 458
M+S G PD +L+ SL KT
Sbjct: 457 MQSSGRNPDAVTYTVLIDSLGKT 479
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 84/309 (27%), Positives = 153/309 (49%), Gaps = 9/309 (2%)
Query: 164 PSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKA 223
P+A IL + +AN+ A EVFM E S Q +++ M+ +Y + G + K
Sbjct: 218 PNARMLSTILSVLGKANQEALAVEVFMR---AEPSAGNTVQ-VYNAMMGVYARRGRFNKV 273
Query: 224 RKLFALMAERGVQQSTVTYNSLMSFETNYKEVS-----KIYDQMQRAGLQPDVVSYALLI 278
++L LM ERG + V++N+L++ + ++ ++++R+GL+PD ++Y LI
Sbjct: 274 QELLDLMRERGCKPDLVSFNTLINARLKAGAMMPNLAIELLNEVRRSGLRPDTITYNTLI 333
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCS 338
+A +A EEA VF++M +P YN ++ + G+ +A +F +
Sbjct: 334 SACSRASNLEEAAKVFDDMEAHHCQPDLWTYNAMISVYGRCGLSGKAEQLFNDLESRGFF 393
Query: 339 PDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEI 398
PD SY ++L A+ ++E ++ + + + GF + +TY T+I Y K E +++
Sbjct: 394 PDAVSYNSLLYAFAREGNVEKVKEIWEEMVKIGFGKDEMTYNTMIHMYGKQGQNELALQL 453
Query: 399 YDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKT 458
Y M+ +G P+ +T ++D+ GK A EM + G P K + L+
Sbjct: 454 YRDMQSSGRNPDAVTYTVLIDSLGKTNKIAEAAGVMSEMLNTGVKPTLKTYSALICGYAK 513
Query: 459 ADERNEANE 467
A + EA E
Sbjct: 514 AGKPVEAEE 522
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 74/344 (21%), Positives = 160/344 (46%), Gaps = 35/344 (10%)
Query: 99 FLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQ 158
L+++ A+ + G+ + +K+ M GY P++ + + RG + ++ EA+ M+
Sbjct: 886 ILLMLDAFARAGNIFEVKKIYHGMKAAGYFPTMHLYRVMARLLSRGKQVRDVEAMLSEME 945
Query: 159 SSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAG 218
+G +P + +LK++V F++ +V+ + ++ L+PD+ ++ +I MY +
Sbjct: 946 EAGFKPDLSIWNSVLKMYVAIEDFRKTIQVYQRI---KEDGLEPDEDTYNTLIVMYCRDH 1002
Query: 219 GYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSKIYDQMQRAGLQPDVVSYALLI 278
E+ F+LM E M+ AGL+P + +Y L+
Sbjct: 1003 RPEEG---FSLMHE-----------------------------MRVAGLEPKLDTYKSLV 1030
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCS 338
++GK + E+A +FEE+ G + Y+ ++ + SG +A +F M+
Sbjct: 1031 ASFGKQQLVEQAEELFEELQSKGCKLDRSFYHTMMKIYRNSGSHSKAERLFSMMKDAGVE 1090
Query: 339 PDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEI 398
P I + ++ +Y ++ + AEK LK+ G + + Y ++I Y + + ++
Sbjct: 1091 PTIATMHLLMVSYGSSGQPQEAEKVLSNLKETGSNLSTLPYSSVIDAYLRNGDYNIGIQK 1150
Query: 399 YDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGF 442
+M+ G++P+ I+T + A ++ A+V ++ GF
Sbjct: 1151 LIQMKKEGLEPDHRIWTCFIRAASLSRRTSEAIVLLNALQDAGF 1194
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 82/379 (21%), Positives = 171/379 (45%), Gaps = 7/379 (1%)
Query: 112 FNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALT-YQ 170
+A +V S M G S + +++ Y + G + A + +S G + ++ Y
Sbjct: 723 ITEASQVFSDMRFCGIKASESLYESMVLLYCKMGFPETAHHLIDFAESDGILLNNISLYV 782
Query: 171 IILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALM 230
+++ + +++AE V L + + D+K+++ +I Y +G YE+AR +F M
Sbjct: 783 NVIEAYGRLKLWQKAESVAGNL---RQRCITVDRKVWNALIEAYAASGCYERARAIFNTM 839
Query: 231 AERGVQQSTVTYNSLMS---FETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARRE 287
G + T N L+ + E+ + ++Q G + S L+++A+ +A
Sbjct: 840 MRDGPSPTVDTINGLLQALIVDGRLDELYVVVQELQDMGFKISKSSILLMLDAFARAGNI 899
Query: 288 EEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTM 347
E ++ M AG PT Y ++ + V + M PD+ + ++
Sbjct: 900 FEVKKIYHGMKAAGYFPTMHLYRVMARLLSRGKQVRDVEAMLSEMEEAGFKPDLSIWNSV 959
Query: 348 LSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGI 407
L YV D + ++R+K+DG P+ TY TLI Y + + E+ + +MRV G+
Sbjct: 960 LKMYVAIEDFRKTIQVYQRIKEDGLEPDEDTYNTLIVMYCRDHRPEEGFSLMHEMRVAGL 1019
Query: 408 KPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANE 467
+P + +++ ++GK + + A ++E++S G D+ + ++ + + + ++A
Sbjct: 1020 EPKLDTYKSLVASFGKQQLVEQAEELFEELQSKGCKLDRSFYHTMMKIYRNSGSHSKAER 1079
Query: 468 LLGNFNHPNNEPGINGLSI 486
L EP I + +
Sbjct: 1080 LFSMMKDAGVEPTIATMHL 1098
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 60/291 (20%), Positives = 128/291 (43%), Gaps = 7/291 (2%)
Query: 169 YQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFA 228
++ +++ +E EA +VF D +K + ++ M+ +Y K G E A L
Sbjct: 710 FESLIQCCLENELITEASQVFS---DMRFCGIKASESLYESMVLLYCKMGFPETAHHLID 766
Query: 229 LMAERGVQQSTVTY--NSLMSFE--TNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKA 284
G+ + ++ N + ++ +++ + +++ + D + LI AY +
Sbjct: 767 FAESDGILLNNISLYVNVIEAYGRLKLWQKAESVAGNLRQRCITVDRKVWNALIEAYAAS 826
Query: 285 RREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSY 344
E A A+F M+ G PT N LL A + G +D+ V + ++ S
Sbjct: 827 GCYERARAIFNTMMRDGPSPTVDTINGLLQALIVDGRLDELYVVVQELQDMGFKISKSSI 886
Query: 345 TTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRV 404
ML A+ A ++ +K + +K G+ P + Y + + ++ + + + +M
Sbjct: 887 LLMLDAFARAGNIFEVKKIYHGMKAAGYFPTMHLYRVMARLLSRGKQVRDVEAMLSEMEE 946
Query: 405 NGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSL 455
G KP+ +I+ +++ Y +DF + Y+ ++ G PD+ N L+ +
Sbjct: 947 AGFKPDLSIWNSVLKMYVAIEDFRKTIQVYQRIKEDGLEPDEDTYNTLIVM 997
>gi|145336953|ref|NP_176455.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806497|sp|Q3ECK2.2|PPR92_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g62680, mitochondrial; Flags: Precursor
gi|332195872|gb|AEE33993.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 548
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 94/373 (25%), Positives = 176/373 (47%), Gaps = 33/373 (8%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
L+ + ++ + A ++ M + GY P +V++ A++++ + R +A F+ ++ G
Sbjct: 161 LVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKG 220
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
RP+ +TY ++ ++++ +A + L D K + P+ + ++ + K G
Sbjct: 221 IRPNVVTYTALVNGLCNSSRWSDAARL---LSDMIKKKITPNVITYSALLDAFVKNGKVL 277
Query: 222 KARKLFALMAERGVQQSTVTYNSL---MSFETNYKEVSKIYDQMQRAGLQPDVVSYALLI 278
+A++LF M + VTY+SL + E ++++D M G DVVSY LI
Sbjct: 278 EAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLI 337
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCS 338
N + KA+R E+ + +F EM G+ YN L+ F +G VD+A+ F M S
Sbjct: 338 NGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGIS 397
Query: 339 PDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEI 398
PDI +Y +L + ++E A F +++ +++TY T+I+G K +E+ +
Sbjct: 398 PDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSL 457
Query: 399 YDKMRVNGIKPNQTIFTTIMDA-------------YGKNK--------------DFDSAV 431
+ + + G+KP+ +TT+M Y K K D +
Sbjct: 458 FCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGLMKNDCTLSDGDITLSA 517
Query: 432 VWYKEMESCGFPP 444
K+M SCG+ P
Sbjct: 518 ELIKKMLSCGYAP 530
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 88/345 (25%), Positives = 166/345 (48%), Gaps = 6/345 (1%)
Query: 112 FNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQI 171
N A + S M K PS+V L+ A + +Y ++ ++M+ G R T+ I
Sbjct: 66 LNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNI 125
Query: 172 ILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMA 231
++ F + A + +L K +PD+ ++ + + A L M
Sbjct: 126 VINCFCCCFQVSLALSILGKML---KLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMV 182
Query: 232 ERGVQQSTVTYNSLMSFETNYKEVSKIYD---QMQRAGLQPDVVSYALLINAYGKARREE 288
E G + V YN+++ K V+ +D +++R G++P+VV+Y L+N + R
Sbjct: 183 EIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWS 242
Query: 289 EALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTML 348
+A + +M+ + P Y+ LLDAF +G V +A+ +F+ M R PDI +Y++++
Sbjct: 243 DAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLI 302
Query: 349 SAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIK 408
+ ++ A + F + G + +V++Y TLI G+ K +E M+++ +M G+
Sbjct: 303 NGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLV 362
Query: 409 PNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILL 453
N + T++ + + D D A ++ +M+ G PD NILL
Sbjct: 363 SNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILL 407
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 98/429 (22%), Positives = 203/429 (47%), Gaps = 16/429 (3%)
Query: 48 LRSERTRGQPLPKDLVLGTLVR-LKQLKKWNVVSEV---LEWLRIQS-WWDFNEMDFLML 102
L S+ + +P P + L+ + +LKK++VV + +E L I++ + FN ++
Sbjct: 72 LFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFN-----IV 126
Query: 103 ITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGP 162
I + + A +L M K GY P V+ +L+ + R R +A ++ +M G
Sbjct: 127 INCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGY 186
Query: 163 RPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEK 222
+P + Y I+ + + +A + F + E+ ++P+ + ++ + +
Sbjct: 187 KPDIVAYNAIIDSLCKTKRVNDAFDFFKEI---ERKGIRPNVVTYTALVNGLCNSSRWSD 243
Query: 223 ARKLFALMAERGVQQSTVTYNSLM-SFETNYK--EVSKIYDQMQRAGLQPDVVSYALLIN 279
A +L + M ++ + + +TY++L+ +F N K E +++++M R + PD+V+Y+ LIN
Sbjct: 244 AARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLIN 303
Query: 280 AYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSP 339
R +EA +F+ M+ G +YN L++ F + V+ +F+ M +
Sbjct: 304 GLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVS 363
Query: 340 DICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIY 399
+ +Y T++ + A D++ A++FF ++ G P++ TY L+ G LEK + I+
Sbjct: 364 NTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIF 423
Query: 400 DKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTA 459
+ M+ + + +TT++ K + A + + G PD ++S T
Sbjct: 424 EDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTK 483
Query: 460 DERNEANEL 468
+E L
Sbjct: 484 GLLHEVEAL 492
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 76/343 (22%), Positives = 156/343 (45%), Gaps = 8/343 (2%)
Query: 143 RGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDE-EKSPLK 201
R + +A +F M S P PS + + +L V+ K+ +V ++L + E ++
Sbjct: 62 RDIKLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKY----DVVISLGKKMEVLGIR 117
Query: 202 PDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVS---KI 258
D F+++I + A + M + G + VT SL++ VS +
Sbjct: 118 NDLYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSL 177
Query: 259 YDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAI 318
D+M G +PD+V+Y +I++ K +R +A F+E+ G+RP Y L++
Sbjct: 178 VDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCN 237
Query: 319 SGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVIT 378
S A + M + + +P++ +Y+ +L A+V + A++ F + + P+++T
Sbjct: 238 SSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVT 297
Query: 379 YGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEME 438
Y +LI G + +++ +++D M G + + T+++ + K K + + ++EM
Sbjct: 298 YSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMS 357
Query: 439 SCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGI 481
G + N L+ A + ++A E + P I
Sbjct: 358 QRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDI 400
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/201 (21%), Positives = 91/201 (45%)
Query: 289 EALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTML 348
+A+ +F +M+ + P+ +N LL A D ++ K M D+ ++ ++
Sbjct: 68 DAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVI 127
Query: 349 SAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIK 408
+ + + A ++ + G+ P+ +T G+L+ G+ + N + + + DKM G K
Sbjct: 128 NCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYK 187
Query: 409 PNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANEL 468
P+ + I+D+ K K + A ++KE+E G P+ L++ + ++A L
Sbjct: 188 PDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARL 247
Query: 469 LGNFNHPNNEPGINGLSISVD 489
L + P + S +D
Sbjct: 248 LSDMIKKKITPNVITYSALLD 268
>gi|110741592|dbj|BAE98744.1| PPR-repeat protein [Arabidopsis thaliana]
Length = 548
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 94/373 (25%), Positives = 176/373 (47%), Gaps = 33/373 (8%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
L+ + ++ + A ++ M + GY P +V++ A++++ + R +A F+ ++ G
Sbjct: 161 LVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKG 220
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
RP+ +TY ++ ++++ +A + L D K + P+ + ++ + K G
Sbjct: 221 IRPNVVTYTALVNGLCNSSRWSDAARL---LSDMIKKKITPNVITYSALLDAFVKNGKVL 277
Query: 222 KARKLFALMAERGVQQSTVTYNSL---MSFETNYKEVSKIYDQMQRAGLQPDVVSYALLI 278
+A++LF M + VTY+SL + E ++++D M G DVVSY LI
Sbjct: 278 EAKELFEEMVRMSIDPDIVTYSSLVNGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLI 337
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCS 338
N + KA+R E+ + +F EM G+ YN L+ F +G VD+A+ F M S
Sbjct: 338 NGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGIS 397
Query: 339 PDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEI 398
PDI +Y +L + ++E A F +++ +++TY T+I+G K +E+ +
Sbjct: 398 PDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSL 457
Query: 399 YDKMRVNGIKPNQTIFTTIMDA-------------YGKNK--------------DFDSAV 431
+ + + G+KP+ +TT+M Y K K D +
Sbjct: 458 FCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGLMKNDCTLSDGDITLSA 517
Query: 432 VWYKEMESCGFPP 444
K+M SCG+ P
Sbjct: 518 ELIKKMLSCGYAP 530
Score = 139 bits (349), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 88/345 (25%), Positives = 166/345 (48%), Gaps = 6/345 (1%)
Query: 112 FNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQI 171
N A + S M K PS+V L+ A + +Y ++ ++M+ G R T+ I
Sbjct: 66 LNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNI 125
Query: 172 ILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMA 231
++ F + A + +L K +PD+ ++ + + A L M
Sbjct: 126 VINCFCCCFQVSLALSILGKML---KLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMV 182
Query: 232 ERGVQQSTVTYNSLMSFETNYKEVSKIYD---QMQRAGLQPDVVSYALLINAYGKARREE 288
E G + V YN+++ K V+ +D +++R G++P+VV+Y L+N + R
Sbjct: 183 EIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWS 242
Query: 289 EALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTML 348
+A + +M+ + P Y+ LLDAF +G V +A+ +F+ M R PDI +Y++++
Sbjct: 243 DAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLV 302
Query: 349 SAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIK 408
+ ++ A + F + G + +V++Y TLI G+ K +E M+++ +M G+
Sbjct: 303 NGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLV 362
Query: 409 PNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILL 453
N + T++ + + D D A ++ +M+ G PD NILL
Sbjct: 363 SNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILL 407
Score = 131 bits (330), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 94/415 (22%), Positives = 199/415 (47%), Gaps = 16/415 (3%)
Query: 48 LRSERTRGQPLPKDLVLGTLVR-LKQLKKWNVVSEV---LEWLRIQS-WWDFNEMDFLML 102
L S+ + +P P + L+ + +LKK++VV + +E L I++ + FN ++
Sbjct: 72 LFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFN-----IV 126
Query: 103 ITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGP 162
I + + A +L M K GY P V+ +L+ + R R +A ++ +M G
Sbjct: 127 INCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGY 186
Query: 163 RPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEK 222
+P + Y I+ + + +A + F + E+ ++P+ + ++ + +
Sbjct: 187 KPDIVAYNAIIDSLCKTKRVNDAFDFFKEI---ERKGIRPNVVTYTALVNGLCNSSRWSD 243
Query: 223 ARKLFALMAERGVQQSTVTYNSLM-SFETNYK--EVSKIYDQMQRAGLQPDVVSYALLIN 279
A +L + M ++ + + +TY++L+ +F N K E +++++M R + PD+V+Y+ L+N
Sbjct: 244 AARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLVN 303
Query: 280 AYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSP 339
R +EA +F+ M+ G +YN L++ F + V+ +F+ M +
Sbjct: 304 GLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVS 363
Query: 340 DICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIY 399
+ +Y T++ + A D++ A++FF ++ G P++ TY L+ G LEK + I+
Sbjct: 364 NTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIF 423
Query: 400 DKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLS 454
+ M+ + + +TT++ K + A + + G PD ++S
Sbjct: 424 EDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMS 478
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 75/343 (21%), Positives = 156/343 (45%), Gaps = 8/343 (2%)
Query: 143 RGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDE-EKSPLK 201
R + +A +F M S P PS + + +L V+ K+ +V ++L + E ++
Sbjct: 62 RDIKLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKY----DVVISLGKKMEVLGIR 117
Query: 202 PDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVS---KI 258
D F+++I + A + M + G + VT SL++ VS +
Sbjct: 118 NDLYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSL 177
Query: 259 YDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAI 318
D+M G +PD+V+Y +I++ K +R +A F+E+ G+RP Y L++
Sbjct: 178 VDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCN 237
Query: 319 SGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVIT 378
S A + M + + +P++ +Y+ +L A+V + A++ F + + P+++T
Sbjct: 238 SSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVT 297
Query: 379 YGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEME 438
Y +L+ G + +++ +++D M G + + T+++ + K K + + ++EM
Sbjct: 298 YSSLVNGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMS 357
Query: 439 SCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGI 481
G + N L+ A + ++A E + P I
Sbjct: 358 QRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDI 400
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/201 (21%), Positives = 91/201 (45%)
Query: 289 EALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTML 348
+A+ +F +M+ + P+ +N LL A D ++ K M D+ ++ ++
Sbjct: 68 DAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVI 127
Query: 349 SAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIK 408
+ + + A ++ + G+ P+ +T G+L+ G+ + N + + + DKM G K
Sbjct: 128 NCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYK 187
Query: 409 PNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANEL 468
P+ + I+D+ K K + A ++KE+E G P+ L++ + ++A L
Sbjct: 188 PDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARL 247
Query: 469 LGNFNHPNNEPGINGLSISVD 489
L + P + S +D
Sbjct: 248 LSDMIKKKITPNVITYSALLD 268
>gi|449511869|ref|XP_004164076.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g48810-like [Cucumis sativus]
Length = 660
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 95/358 (26%), Positives = 174/358 (48%), Gaps = 11/358 (3%)
Query: 99 FLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQ 158
F+ +I Y + G +A K+ + + G P+V + L++A +++ ++ M+
Sbjct: 112 FICIINGYKRVGSAEQALKMFYRIGEFGCKPTVRIYNHLLDALLSENKFQMINPLYTNMK 171
Query: 159 SSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAG 218
G P+ TY I+LK + ++ A ++F+ + + P PD + M+ KAG
Sbjct: 172 KDGLIPNVFTYNILLKALCKNDRVDAAHKLFVE-MSNKGCP--PDAVTYTTMVSSLCKAG 228
Query: 219 GYEKARKLFALMAERGVQQSTVTYNSL---MSFETNYKEVSKIYDQMQRAGLQPDVVSYA 275
+ AR+L A R + S YN+L M E + K+ +M G+ P+VVSY+
Sbjct: 229 KIDDAREL----AGR-FKPSVPVYNALIDGMCKEGRIEVAIKLLGEMMDNGVDPNVVSYS 283
Query: 276 LLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRD 335
+IN+ + E A A+F +M G + L+ + G + +A ++K M +D
Sbjct: 284 CIINSLCVSGNVELAFALFAQMFLRGCDANIHTFTPLIKGCFMRGKLYEALDLWKLMIQD 343
Query: 336 RCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKM 395
C P++ +Y T++ + +E A + ++++ G +PNV TY LI G+AK +L
Sbjct: 344 GCEPNVVAYNTLIHGLCSNGSLEEALQVCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGA 403
Query: 396 MEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILL 453
E +++M +G +PN +T ++D KN FD A ++M G P+ N +
Sbjct: 404 SETWNRMISHGCRPNVVTYTCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTITFNTFI 461
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 103/399 (25%), Positives = 173/399 (43%), Gaps = 30/399 (7%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
L+ A + F + + M K G P+V ++ L++A + R A +F M + G
Sbjct: 150 LLDALLSENKFQMINPLYTNMKKDGLIPNVFTYNILLKALCKNDRVDAAHKLFVEMSNKG 209
Query: 162 PRPSALTYQIILKLFVEANKFKEAEE--------------------------VFMTLLDE 195
P A+TY ++ +A K +A E V + LL E
Sbjct: 210 CPPDAVTYTTMVSSLCKAGKIDDARELAGRFKPSVPVYNALIDGMCKEGRIEVAIKLLGE 269
Query: 196 EK-SPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMS---FETN 251
+ + P+ + +I +G E A LFA M RG + T+ L+
Sbjct: 270 MMDNGVDPNVVSYSCIINSLCVSGNVELAFALFAQMFLRGCDANIHTFTPLIKGCFMRGK 329
Query: 252 YKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNI 311
E ++ M + G +P+VV+Y LI+ EEAL V ++M +G P Y+I
Sbjct: 330 LYEALDLWKLMIQDGCEPNVVAYNTLIHGLCSNGSLEEALQVCDQMQRSGCLPNVTTYSI 389
Query: 312 LLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDG 371
L+D FA SG + A + M C P++ +YT M+ S + A ++ +G
Sbjct: 390 LIDGFAKSGDLVGASETWNRMISHGCRPNVVTYTCMVDVLCKNSMFDQANSLVEKMTLEG 449
Query: 372 FVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAV 431
PN IT+ T IKG +E M++ ++M+ +G PN T + ++DA + ++ A
Sbjct: 450 CTPNTITFNTFIKGLCGNGRVEWAMKLLERMQGHGCLPNITTYNELLDALFRMNKYEEAF 509
Query: 432 VWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLG 470
++E+E+ P+ N +L A EA +L G
Sbjct: 510 GLFQEIEARNLQPNLVTYNTVLYGFSRAGMMGEALQLFG 548
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 80/334 (23%), Positives = 154/334 (46%), Gaps = 14/334 (4%)
Query: 127 YAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIIL-KLFVEAN---KF 182
+ PSV + AL++ + GR + A + M +G P+ ++Y I+ L V N F
Sbjct: 240 FKPSVPVYNALIDGMCKEGRIEVAIKLLGEMMDNGVDPNVVSYSCIINSLCVSGNVELAF 299
Query: 183 KEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTY 242
++F+ D P K M +Y+ A L+ LM + G + + V Y
Sbjct: 300 ALFAQMFLRGCDANIHTFTPLIKGCFMRGKLYE-------ALDLWKLMIQDGCEPNVVAY 352
Query: 243 NSL---MSFETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLD 299
N+L + + +E ++ DQMQR+G P+V +Y++LI+ + K+ A + M+
Sbjct: 353 NTLIHGLCSNGSLEEALQVCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGASETWNRMIS 412
Query: 300 AGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEG 359
G RP Y ++D + M DQA ++ + M + C+P+ ++ T + +E
Sbjct: 413 HGCRPNVVTYTCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTITFNTFIKGLCGNGRVEW 472
Query: 360 AEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMD 419
A K R++ G +PN+ TY L+ ++N E+ ++ ++ ++PN + T++
Sbjct: 473 AMKLLERMQGHGCLPNITTYNELLDALFRMNKYEEAFGLFQEIEARNLQPNLVTYNTVLY 532
Query: 420 AYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILL 453
+ + A+ + + G PD N ++
Sbjct: 533 GFSRAGMMGEALQLFGKALVRGTAPDSITYNTMI 566
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 89/342 (26%), Positives = 160/342 (46%), Gaps = 14/342 (4%)
Query: 93 DFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEA 152
D N F LI +G +A + M + G P+VV++ L+ G + A
Sbjct: 311 DANIHTFTPLIKGCFMRGKLYEALDLWKLMIQDGCEPNVVAYNTLIHGLCSNGSLEEALQ 370
Query: 153 IFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIY 212
+ +MQ SG P+ TY I++ F ++ A E + ++ +P+ + M+
Sbjct: 371 VCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGASETWNRMISHG---CRPNVVTYTCMVD 427
Query: 213 MYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVS---KIYDQMQRAGLQP 269
+ K +++A L M G +T+T+N+ + V K+ ++MQ G P
Sbjct: 428 VLCKNSMFDQANSLVEKMTLEGCTPNTITFNTFIKGLCGNGRVEWAMKLLERMQGHGCLP 487
Query: 270 DVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVF 329
++ +Y L++A + + EEA +F+E+ ++P YN +L F+ +GM+ +A +F
Sbjct: 488 NITTYNELLDALFRMNKYEEAFGLFQEIEARNLQPNLVTYNTVLYGFSRAGMMGEALQLF 547
Query: 330 -KCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQ-DGFVPNVITYGTLIKGYA 387
K + R +PD +Y TM+ AY ++ A + R+ + P++ITY +LI G
Sbjct: 548 GKALVRGT-APDSITYNTMIHAYCKQGKVKIAAQLVERVSSMKEWHPDIITYTSLIWGAC 606
Query: 388 KVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDS 429
N+E+ M DK GI PN + ++ + FDS
Sbjct: 607 NWMNIEEAMAFLDKAINQGICPNFATWNALVRCF-----FDS 643
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 81/307 (26%), Positives = 140/307 (45%), Gaps = 11/307 (3%)
Query: 86 LRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGG 145
L IQ + N + + LI G +A +V M + G P+V +++ L++ + + G
Sbjct: 339 LMIQDGCEPNVVAYNTLIHGLCSNGSLEEALQVCDQMQRSGCLPNVTTYSILIDGFAKSG 398
Query: 146 RYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVF--MTLLDEEKSPLKPD 203
A + RM S G RP+ +TY ++ + + + F +A + MTL P+
Sbjct: 399 DLVGASETWNRMISHGCRPNVVTYTCMVDVLCKNSMFDQANSLVEKMTL-----EGCTPN 453
Query: 204 QKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMS--FETN-YKEVSKIYD 260
F+ I G E A KL M G + TYN L+ F N Y+E ++
Sbjct: 454 TITFNTFIKGLCGNGRVEWAMKLLERMQGHGCLPNITTYNELLDALFRMNKYEEAFGLFQ 513
Query: 261 QMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISG 320
+++ LQP++V+Y ++ + +A EAL +F + L G P YN ++ A+ G
Sbjct: 514 EIEARNLQPNLVTYNTVLYGFSRAGMMGEALQLFGKALVRGTAPDSITYNTMIHAYCKQG 573
Query: 321 MVD-QARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITY 379
V A+ V + PDI +YT+++ N ++E A F + G PN T+
Sbjct: 574 KVKIAAQLVERVSSMKEWHPDIITYTSLIWGACNWMNIEEAMAFLDKAINQGICPNFATW 633
Query: 380 GTLIKGY 386
L++ +
Sbjct: 634 NALVRCF 640
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 71/288 (24%), Positives = 129/288 (44%), Gaps = 10/288 (3%)
Query: 206 MFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSF---ETNYKEVSKIYDQM 262
+F +I YK+ G E+A K+F + E G + + YN L+ E ++ ++ +Y M
Sbjct: 111 LFICIINGYKRVGSAEQALKMFYRIGEFGCKPTVRIYNHLLDALLSENKFQMINPLYTNM 170
Query: 263 QRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMV 322
++ GL P+V +Y +L+ A K R + A +F EM + G P Y ++ + +G +
Sbjct: 171 KKDGLIPNVFTYNILLKALCKNDRVDAAHKLFVEMSNKGCPPDAVTYTTMVSSLCKAGKI 230
Query: 323 DQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTL 382
D AR + R P + Y ++ +E A K + +G PNV++Y +
Sbjct: 231 DDAREL-----AGRFKPSVPVYNALIDGMCKEGRIEVAIKLLGEMMDNGVDPNVVSYSCI 285
Query: 383 IKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMD-AYGKNKDFDSAVVWYKEMESCG 441
I N+E ++ +M + G N FT ++ + + K +++ +W K M G
Sbjct: 286 INSLCVSGNVELAFALFAQMFLRGCDANIHTFTPLIKGCFMRGKLYEALDLW-KLMIQDG 344
Query: 442 FPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGINGLSISVD 489
P+ A N L+ + EA ++ P + SI +D
Sbjct: 345 CEPNVVAYNTLIHGLCSNGSLEEALQVCDQMQRSGCLPNVTTYSILID 392
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 75/367 (20%), Positives = 160/367 (43%), Gaps = 11/367 (2%)
Query: 93 DFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEA 152
D N + + +I + G+ A + + M +G ++ + T L++ G+ A
Sbjct: 276 DPNVVSYSCIINSLCVSGNVELAFALFAQMFLRGCDANIHTFTPLIKGCFMRGKLYEALD 335
Query: 153 IFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIY 212
+++ M G P+ + Y ++ +EA +V + ++S P+ + ++I
Sbjct: 336 LWKLMIQDGCEPNVVAYNTLIHGLCSNGSLEEALQVCDQM---QRSGCLPNVTTYSILID 392
Query: 213 MYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSF---ETNYKEVSKIYDQMQRAGLQP 269
+ K+G A + + M G + + VTY ++ + + + + + ++M G P
Sbjct: 393 GFAKSGDLVGASETWNRMISHGCRPNVVTYTCMVDVLCKNSMFDQANSLVEKMTLEGCTP 452
Query: 270 DVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVF 329
+ +++ I R E A+ + E M G P YN LLDA ++A +F
Sbjct: 453 NTITFNTFIKGLCGNGRVEWAMKLLERMQGHGCLPNITTYNELLDALFRMNKYEEAFGLF 512
Query: 330 KCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKV 389
+ + P++ +Y T+L + A M A + F + G P+ ITY T+I Y K
Sbjct: 513 QEIEARNLQPNLVTYNTVLYGFSRAGMMGEALQLFGKALVRGTAPDSITYNTMIHAYCKQ 572
Query: 390 NNLEKMMEIYDKMRVNGIK---PNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQ 446
++ ++ + RV+ +K P+ +T+++ + + A+ + + + G P+
Sbjct: 573 GKVKIAAQLVE--RVSSMKEWHPDIITYTSLIWGACNWMNIEEAMAFLDKAINQGICPNF 630
Query: 447 KAKNILL 453
N L+
Sbjct: 631 ATWNALV 637
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/230 (22%), Positives = 98/230 (42%), Gaps = 8/230 (3%)
Query: 228 ALMAERGVQQSTVTYNSL---MSFETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKA 284
A+ Q + TY + + E V I QM+ G+ + +IN Y +
Sbjct: 63 AIANSNAFQHTASTYRVMIERLGRECEMDMVQYILQQMKMDGINCCEDLFICIINGYKRV 122
Query: 285 RREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSY 344
E+AL +F + + G +PT + YN LLDA ++ M++D P++ +Y
Sbjct: 123 GSAEQALKMFYRIGEFGCKPTVRIYNHLLDALLSENKFQMINPLYTNMKKDGLIPNVFTY 182
Query: 345 TTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRV 404
+L A ++ A K F + G P+ +TY T++ K ++ E+ +
Sbjct: 183 NILLKALCKNDRVDAAHKLFVEMSNKGCPPDAVTYTTMVSSLCKAGKIDDARELAGR--- 239
Query: 405 NGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLS 454
KP+ ++ ++D K + A+ EM G P+ + + +++
Sbjct: 240 --FKPSVPVYNALIDGMCKEGRIEVAIKLLGEMMDNGVDPNVVSYSCIIN 287
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 45/191 (23%), Positives = 83/191 (43%), Gaps = 5/191 (2%)
Query: 285 RREEEALAVFEEMLDA-GVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRD--RCSPDI 341
R L F + ++ + T Y ++++ +D + + + M+ D C D+
Sbjct: 52 RNLSSVLGFFSAIANSNAFQHTASTYRVMIERLGRECEMDMVQYILQQMKMDGINCCEDL 111
Query: 342 CSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDK 401
+ +++ Y E A K F R+ + G P V Y L+ N + + +Y
Sbjct: 112 --FICIINGYKRVGSAEQALKMFYRIGEFGCKPTVRIYNHLLDALLSENKFQMINPLYTN 169
Query: 402 MRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADE 461
M+ +G+ PN + ++ A KN D+A + EM + G PPD ++S A +
Sbjct: 170 MKKDGLIPNVFTYNILLKALCKNDRVDAAHKLFVEMSNKGCPPDAVTYTTMVSSLCKAGK 229
Query: 462 RNEANELLGNF 472
++A EL G F
Sbjct: 230 IDDARELAGRF 240
>gi|410110109|gb|AFV61134.1| pentatricopeptide repeat-containing protein 123, partial [Lippia
diamantinensis]
Length = 363
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 95/365 (26%), Positives = 179/365 (49%), Gaps = 37/365 (10%)
Query: 111 DFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQ 170
D++KA + S + + G+ P +V++ A++ +G+ ++ A ++ M+++G P+ +Y
Sbjct: 1 DYSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMKTAGVMPNTTSYS 60
Query: 171 IILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALM 230
+L ++VE KF EA VF + + E K L D ++MI +Y + G ++A KLF M
Sbjct: 61 TLLTMYVENKKFLEALXVF-SEMREIKCLL--DLTTCNIMIDVYGQLGMAKEADKLFWGM 117
Query: 231 AERGVQQSTVTYNSLMSFETN---YKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARRE 287
+ G++ + V+YN+L+ + + E ++ MQR ++ +VV+Y ++ YGK
Sbjct: 118 RKMGIEPNVVSYNTLLRVYGDAELFGESIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEH 177
Query: 288 EEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTM 347
E+A + +EM G+ P Y+ ++ + G +D+A +F+ +R D + TM
Sbjct: 178 EKANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSTGVEIDQILFQTM 237
Query: 348 LSAY-------------------------------VNASDMEGAEKFFRRLKQDGFVPNV 376
+ AY A +E A FR+ G V ++
Sbjct: 238 IVAYERAGLIAHAKRLLHELKRPDNIPRDTAIHILAGAGRIEEATYVFRQAIDAGEVKDI 297
Query: 377 ITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKE 436
+ +I +K ++E++DKMR G P+ + +++AYGK ++FD A Y E
Sbjct: 298 TVFERMIHLLSKYKKYANVVEVFDKMRGLGYFPDSNVIAVVLNAYGKLQEFDKANDVYME 357
Query: 437 MESCG 441
M+ G
Sbjct: 358 MQEVG 362
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 72/263 (27%), Positives = 127/263 (48%), Gaps = 3/263 (1%)
Query: 220 YEKARKLFALMAERGVQQSTVTYNSLMSF---ETNYKEVSKIYDQMQRAGLQPDVVSYAL 276
Y KA +F+ + G V YN++++ ++E + +M+ AG+ P+ SY+
Sbjct: 2 YSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMKTAGVMPNTTSYST 61
Query: 277 LINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDR 336
L+ Y + ++ EAL VF EM + NI++D + GM +A +F MR+
Sbjct: 62 LLTMYVENKKFLEALXVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMG 121
Query: 337 CSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMM 396
P++ SY T+L Y +A + FR +++ NV+TY +++ Y K EK
Sbjct: 122 IEPNVVSYNTLLRVYGDAELFGESIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKAN 181
Query: 397 EIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLA 456
+ +M+ GI+PN ++TI+ +GK D A + ++++ S G DQ ++
Sbjct: 182 NLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSTGVEIDQILFQTMIVAY 241
Query: 457 KTADERNEANELLGNFNHPNNEP 479
+ A A LL P+N P
Sbjct: 242 ERAGLIAHAKRLLHELKRPDNIP 264
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 56/244 (22%), Positives = 115/244 (47%), Gaps = 6/244 (2%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + + L+ YG F ++ + M +K +VV++ ++M YG+ ++ A +
Sbjct: 125 NVVSYNTLLRVYGDAELFGESIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLI 184
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
+ MQS G P+++TY I+ ++ + K A +F L + ++ DQ +F MI Y
Sbjct: 185 QEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKL---RSTGVEIDQILFQTMIVAY 241
Query: 215 KKAGGYEKARKLFA-LMAERGVQQSTVTYNSLMSFETNYKEVSKIYDQMQRAGLQPDVVS 273
++AG A++L L + + T + +++ +E + ++ Q AG D+
Sbjct: 242 ERAGLIAHAKRLLHELKRPDNIPRDTAIH--ILAGAGRIEEATYVFRQAIDAGEVKDITV 299
Query: 274 YALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMR 333
+ +I+ K ++ + VF++M G P ++L+A+ D+A V+ M+
Sbjct: 300 FERMIHLLSKYKKYANVVEVFDKMRGLGYFPDSNVIAVVLNAYGKLQEFDKANDVYMEMQ 359
Query: 334 RDRC 337
C
Sbjct: 360 EVGC 363
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 57/126 (45%)
Query: 356 DMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFT 415
D A F RLK+ GF P+++ Y +I + K + + +M+ G+ PN T ++
Sbjct: 1 DYSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMKTAGVMPNTTSYS 60
Query: 416 TIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHP 475
T++ Y +NK F A+ + EM D NI++ + EA++L
Sbjct: 61 TLLTMYVENKKFLEALXVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKM 120
Query: 476 NNEPGI 481
EP +
Sbjct: 121 GIEPNV 126
>gi|356512664|ref|XP_003525037.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g74750-like [Glycine max]
Length = 873
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 94/340 (27%), Positives = 160/340 (47%), Gaps = 6/340 (1%)
Query: 70 LKQLKKWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAP 129
LKQL+ +V +WLR Q + + + ++ G+ F+ K+L M K G P
Sbjct: 351 LKQLQDPSVALGFFDWLRRQPGFRHDGHTYTTMVGILGRARRFDSISKLLEQMVKDGCQP 410
Query: 130 SVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVF 189
+VV++ L+ YG K A +F MQ G P +TY ++ + +A A ++
Sbjct: 411 NVVTYNRLIHCYGCANYLKEALNVFNEMQEVGCEPDRVTYCTLIDIHAKAGFIDVAMSMY 470
Query: 190 MTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFE 249
+ +++ L PD + ++I KAG A LF M E G + VTYN +++ +
Sbjct: 471 KRM---QEAGLSPDTFTYSVIINCLGKAGNLAAAHWLFCEMVEHGCVPNLVTYNIMIALQ 527
Query: 250 T---NYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTH 306
NY+ K+Y MQ AG QPD V+Y++++ A G EEA +VF EM P
Sbjct: 528 AKARNYEMALKLYHDMQNAGFQPDKVTYSIVMEALGHCGYLEEAESVFVEMQQKNWVPDE 587
Query: 307 KAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRR 366
Y +L+D + +G V++A ++ M P++ + ++LSA++ + A +
Sbjct: 588 PVYGLLVDLWGKAGNVEKASEWYQAMLNAGLLPNVPTCNSLLSAFLRLHRLPDAYNLVQS 647
Query: 367 LKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNG 406
+ G P++ TY L+ + M + M V G
Sbjct: 648 MVALGLRPSLQTYTLLLSCCTEAQPAHDMGFFCELMAVTG 687
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 72/242 (29%), Positives = 126/242 (52%), Gaps = 3/242 (1%)
Query: 229 LMAERGVQQSTVTYNSLMSF---ETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKAR 285
L + G + TY +++ + +SK+ +QM + G QP+VV+Y LI+ YG A
Sbjct: 367 LRRQPGFRHDGHTYTTMVGILGRARRFDSISKLLEQMVKDGCQPNVVTYNRLIHCYGCAN 426
Query: 286 REEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYT 345
+EAL VF EM + G P Y L+D A +G +D A +++K M+ SPD +Y+
Sbjct: 427 YLKEALNVFNEMQEVGCEPDRVTYCTLIDIHAKAGFIDVAMSMYKRMQEAGLSPDTFTYS 486
Query: 346 TMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVN 405
+++ A ++ A F + + G VPN++TY +I AK N E +++Y M+
Sbjct: 487 VIINCLGKAGNLAAAHWLFCEMVEHGCVPNLVTYNIMIALQAKARNYEMALKLYHDMQNA 546
Query: 406 GIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEA 465
G +P++ ++ +M+A G + A + EM+ + PD+ +L+ L A +A
Sbjct: 547 GFQPDKVTYSIVMEALGHCGYLEEAESVFVEMQQKNWVPDEPVYGLLVDLWGKAGNVEKA 606
Query: 466 NE 467
+E
Sbjct: 607 SE 608
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 68/258 (26%), Positives = 133/258 (51%), Gaps = 3/258 (1%)
Query: 200 LKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFE--TNY-KEVS 256
+ D + M+ + +A ++ KL M + G Q + VTYN L+ NY KE
Sbjct: 373 FRHDGHTYTTMVGILGRARRFDSISKLLEQMVKDGCQPNVVTYNRLIHCYGCANYLKEAL 432
Query: 257 KIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAF 316
++++MQ G +PD V+Y LI+ + KA + A+++++ M +AG+ P Y+++++
Sbjct: 433 NVFNEMQEVGCEPDRVTYCTLIDIHAKAGFIDVAMSMYKRMQEAGLSPDTFTYSVIINCL 492
Query: 317 AISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNV 376
+G + A +F M C P++ +Y M++ A + E A K + ++ GF P+
Sbjct: 493 GKAGNLAAAHWLFCEMVEHGCVPNLVTYNIMIALQAKARNYEMALKLYHDMQNAGFQPDK 552
Query: 377 ITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKE 436
+TY +++ LE+ ++ +M+ P++ ++ ++D +GK + + A WY+
Sbjct: 553 VTYSIVMEALGHCGYLEEAESVFVEMQQKNWVPDEPVYGLLVDLWGKAGNVEKASEWYQA 612
Query: 437 MESCGFPPDQKAKNILLS 454
M + G P+ N LLS
Sbjct: 613 MLNAGLLPNVPTCNSLLS 630
Score = 121 bits (304), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 84/321 (26%), Positives = 150/321 (46%), Gaps = 9/321 (2%)
Query: 161 GPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGY 220
G R TY ++ + A +F ++ ++ K +P+ ++ +I+ Y A
Sbjct: 372 GFRHDGHTYTTMVGILGRARRFDSISKLLEQMV---KDGCQPNVVTYNRLIHCYGCANYL 428
Query: 221 EKARKLFALMAERGVQQSTVTYNSLMSF--ETNYKEVS-KIYDQMQRAGLQPDVVSYALL 277
++A +F M E G + VTY +L+ + + +V+ +Y +MQ AGL PD +Y+++
Sbjct: 429 KEALNVFNEMQEVGCEPDRVTYCTLIDIHAKAGFIDVAMSMYKRMQEAGLSPDTFTYSVI 488
Query: 278 INAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRC 337
IN GKA A +F EM++ G P YNI++ A + + A ++ M+
Sbjct: 489 INCLGKAGNLAAAHWLFCEMVEHGCVPNLVTYNIMIALQAKARNYEMALKLYHDMQNAGF 548
Query: 338 SPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMME 397
PD +Y+ ++ A + +E AE F ++Q +VP+ YG L+ + K N+EK E
Sbjct: 549 QPDKVTYSIVMEALGHCGYLEEAESVFVEMQQKNWVPDEPVYGLLVDLWGKAGNVEKASE 608
Query: 398 IYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAK 457
Y M G+ PN +++ A+ + A + M + G P + +LLS
Sbjct: 609 WYQAMLNAGLLPNVPTCNSLLSAFLRLHRLPDAYNLVQSMVALGLRPSLQTYTLLLSCCT 668
Query: 458 TADERNEAN---ELLGNFNHP 475
A ++ EL+ HP
Sbjct: 669 EAQPAHDMGFFCELMAVTGHP 689
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 100/196 (51%), Gaps = 1/196 (0%)
Query: 259 YDQMQR-AGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFA 317
+D ++R G + D +Y ++ G+ARR + + E+M+ G +P YN L+ +
Sbjct: 364 FDWLRRQPGFRHDGHTYTTMVGILGRARRFDSISKLLEQMVKDGCQPNVVTYNRLIHCYG 423
Query: 318 ISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVI 377
+ + +A VF M+ C PD +Y T++ + A ++ A ++R+++ G P+
Sbjct: 424 CANYLKEALNVFNEMQEVGCEPDRVTYCTLIDIHAKAGFIDVAMSMYKRMQEAGLSPDTF 483
Query: 378 TYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEM 437
TY +I K NL ++ +M +G PN + ++ K ++++ A+ Y +M
Sbjct: 484 TYSVIINCLGKAGNLAAAHWLFCEMVEHGCVPNLVTYNIMIALQAKARNYEMALKLYHDM 543
Query: 438 ESCGFPPDQKAKNILL 453
++ GF PD+ +I++
Sbjct: 544 QNAGFQPDKVTYSIVM 559
>gi|410110129|gb|AFV61144.1| pentatricopeptide repeat-containing protein 123, partial [Lippia
pusilla]
Length = 381
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 97/374 (25%), Positives = 181/374 (48%), Gaps = 37/374 (9%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
LI K D++KA + S + + G+ P +V++ A++ +G+ ++ A ++ M+++G
Sbjct: 11 LIELSRKLCDYSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMKTAG 70
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
P+ +Y +L ++VE KF EA VF + + E K L D ++MI +Y + G +
Sbjct: 71 VMPNTTSYSTLLTMYVENKKFLEALSVF-SEMREIKCLL--DLTTCNIMIDVYGQLGMAK 127
Query: 222 KARKLFALMAERGVQQSTVTYNSLMSFETN---YKEVSKIYDQMQRAGLQPDVVSYALLI 278
+A KLF M + G++ + V+YN+L+ + + E ++ MQR ++ +VV+Y ++
Sbjct: 128 EADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMM 187
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCS 338
YGK E+A + +EM G+ P Y+ ++ + G +D+A +F+ +R
Sbjct: 188 MIYGKTLEHEKANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSTGVE 247
Query: 339 PDICSYTTMLSAY-------------------------------VNASDMEGAEKFFRRL 367
D + TM+ Y A +E A FR+
Sbjct: 248 IDQILFQTMIVXYERAGLIAHAKRLLHELKRPDNIPRDTAIHILAGAGRIEEATYVFRQA 307
Query: 368 KQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDF 427
G V ++ + +I +K ++E++DKMR G P+ + +++AYGK ++F
Sbjct: 308 IDAGEVKDITVFERMIHLLSKYKKYANVVEVFDKMRGLGYFPDSNVIAVVLNAYGKLQEF 367
Query: 428 DSAVVWYKEMESCG 441
D A Y EM+ G
Sbjct: 368 DKANDVYMEMQEVG 381
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 76/280 (27%), Positives = 136/280 (48%), Gaps = 3/280 (1%)
Query: 203 DQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSF---ETNYKEVSKIY 259
D ++ +I + +K Y KA +F+ + G V YN++++ ++E +
Sbjct: 4 DLVLYSNLIELSRKLCDYSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLI 63
Query: 260 DQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAIS 319
+M+ AG+ P+ SY+ L+ Y + ++ EAL+VF EM + NI++D +
Sbjct: 64 SEMKTAGVMPNTTSYSTLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQL 123
Query: 320 GMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITY 379
GM +A +F MR+ P++ SY T+L Y +A A FR +++ NV+TY
Sbjct: 124 GMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTY 183
Query: 380 GTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMES 439
+++ Y K EK + +M+ GI+PN ++TI+ +GK D A + ++++ S
Sbjct: 184 NSMMMIYGKTLEHEKANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRS 243
Query: 440 CGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEP 479
G DQ ++ + A A LL P+N P
Sbjct: 244 TGVEIDQILFQTMIVXYERAGLIAHAKRLLHELKRPDNIP 283
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 69/274 (25%), Positives = 134/274 (48%), Gaps = 6/274 (2%)
Query: 182 FKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVT 241
+ +A +F L ++S PD ++ MI ++ KA + +AR L + M GV +T +
Sbjct: 21 YSKAISIFSRL---KRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMKTAGVMPNTTS 77
Query: 242 YNSLMSFETNYK---EVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEML 298
Y++L++ K E ++ +M+ D+ + ++I+ YG+ +EA +F M
Sbjct: 78 YSTLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMR 137
Query: 299 DAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDME 358
G+ P +YN LL + + + +A +F+ M+R ++ +Y +M+ Y + E
Sbjct: 138 KMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHE 197
Query: 359 GAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIM 418
A + ++ G PN ITY T+I + KV L++ ++ K+R G++ +Q +F T++
Sbjct: 198 KANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSTGVEIDQILFQTMI 257
Query: 419 DAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNIL 452
Y + A E++ P A +IL
Sbjct: 258 VXYERAGLIAHAKRLLHELKRPDNIPRDTAIHIL 291
Score = 65.5 bits (158), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 35/142 (24%), Positives = 63/142 (44%)
Query: 340 DICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIY 399
D+ Y+ ++ D A F RLK+ GF P+++ Y +I + K + +
Sbjct: 4 DLVLYSNLIELSRKLCDYSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLI 63
Query: 400 DKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTA 459
+M+ G+ PN T ++T++ Y +NK F A+ + EM D NI++ +
Sbjct: 64 SEMKTAGVMPNTTSYSTLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQL 123
Query: 460 DERNEANELLGNFNHPNNEPGI 481
EA++L EP +
Sbjct: 124 GMAKEADKLFWGMRKMGIEPNV 145
>gi|115444491|ref|NP_001046025.1| Os02g0170000 [Oryza sativa Japonica Group]
gi|49388067|dbj|BAD25179.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113535556|dbj|BAF07939.1| Os02g0170000 [Oryza sativa Japonica Group]
Length = 397
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 101/368 (27%), Positives = 184/368 (50%), Gaps = 11/368 (2%)
Query: 99 FLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQ 158
+ +L+ AY G ++AE V+S M + G P+ + A ++ + + A +++RM+
Sbjct: 15 YALLLRAYCNAGSLHRAEGVISEMREHGIPPNATVYNAYLDGLLKARCTEKAVEVYQRMK 74
Query: 159 SSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKS-PLKPDQKMFHMMIYMYKKA 217
R + T+ +++ ++ +A + + +VF +E KS KP+ + ++ + +
Sbjct: 75 RERCRANTETFTLMINVYGKAKQPMSSMKVF----NEMKSIGCKPNICTYTALVNAFARE 130
Query: 218 GGYEKARKLFALMAERGVQQSTVTYNSLMSFETNY---KEVSKIYDQMQRAGLQPDVVSY 274
G EKA ++F M + G + YN+LM + + S+I+ MQ G +PD SY
Sbjct: 131 GLCEKAEEVFEEMQQAGHEPDVYAYNALMEAYSRAGLPQGASEIFSLMQHMGCEPDRASY 190
Query: 275 ALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRR 334
+L++AYG+A E+A AVFEE+ G+ PT K++ +LL A A SG + V + +
Sbjct: 191 NILVDAYGRAGLHEDAEAVFEELKQRGMSPTMKSHMLLLAAHARSGNATRCEEVMAQLHK 250
Query: 335 DRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEK 394
+PD + ML+AY A ++ E+ F +++ G +V TY + Y + + +
Sbjct: 251 SGLTPDTFALNAMLNAYARAGRLDDMERLFAAMERRGDA-DVGTYNVAVNAYGRAGYVGR 309
Query: 395 MMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLS 454
M + + G+ + +T M AY + K++ V +EM G PD +L
Sbjct: 310 MEAAFAAVAARGLAADVVTWTARMGAYARRKEYGRCVGMVEEMVDAGCYPDAGTARVL-- 367
Query: 455 LAKTADER 462
LA +DER
Sbjct: 368 LAACSDER 375
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 80/310 (25%), Positives = 142/310 (45%), Gaps = 35/310 (11%)
Query: 129 PSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEV 188
P+ ++ L+ AY G AE + M+ G P+A Y L ++A ++A EV
Sbjct: 10 PTEDTYALLLRAYCNAGSLHRAEGVISEMREHGIPPNATVYNAYLDGLLKARCTEKAVEV 69
Query: 189 FMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSF 248
+ + E + + + F +MI +Y KA ++ + M
Sbjct: 70 YQRMKRER---CRANTETFTLMINVYGKA------KQPMSSM------------------ 102
Query: 249 ETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKA 308
K++++M+ G +P++ +Y L+NA+ + E+A VFEEM AG P A
Sbjct: 103 --------KVFNEMKSIGCKPNICTYTALVNAFAREGLCEKAEEVFEEMQQAGHEPDVYA 154
Query: 309 YNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLK 368
YN L++A++ +G+ A +F M+ C PD SY ++ AY A E AE F LK
Sbjct: 155 YNALMEAYSRAGLPQGASEIFSLMQHMGCEPDRASYNILVDAYGRAGLHEDAEAVFEELK 214
Query: 369 QDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFD 428
Q G P + ++ L+ +A+ N + E+ ++ +G+ P+ +++AY + D
Sbjct: 215 QRGMSPTMKSHMLLLAAHARSGNATRCEEVMAQLHKSGLTPDTFALNAMLNAYARAGRLD 274
Query: 429 SAVVWYKEME 438
+ ME
Sbjct: 275 DMERLFAAME 284
Score = 115 bits (287), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 66/269 (24%), Positives = 131/269 (48%), Gaps = 8/269 (2%)
Query: 190 MTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNS----L 245
M LL+ + P + + +++ Y AG +A + + M E G+ + YN+ L
Sbjct: 1 MALLEAQ---CVPTEDTYALLLRAYCNAGSLHRAEGVISEMREHGIPPNATVYNAYLDGL 57
Query: 246 MSFETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPT 305
+ K V ++Y +M+R + + ++ L+IN YGKA++ ++ VF EM G +P
Sbjct: 58 LKARCTEKAV-EVYQRMKRERCRANTETFTLMINVYGKAKQPMSSMKVFNEMKSIGCKPN 116
Query: 306 HKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFR 365
Y L++AFA G+ ++A VF+ M++ PD+ +Y ++ AY A +GA + F
Sbjct: 117 ICTYTALVNAFAREGLCEKAEEVFEEMQQAGHEPDVYAYNALMEAYSRAGLPQGASEIFS 176
Query: 366 RLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNK 425
++ G P+ +Y L+ Y + E ++++++ G+ P ++ A+ ++
Sbjct: 177 LMQHMGCEPDRASYNILVDAYGRAGLHEDAEAVFEELKQRGMSPTMKSHMLLLAAHARSG 236
Query: 426 DFDSAVVWYKEMESCGFPPDQKAKNILLS 454
+ ++ G PD A N +L+
Sbjct: 237 NATRCEEVMAQLHKSGLTPDTFALNAMLN 265
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 78/327 (23%), Positives = 148/327 (45%), Gaps = 17/327 (5%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N F ++I YGK + KV + M G P++ ++TAL+ A+ R G + AE +F
Sbjct: 81 NTETFTLMINVYGKAKQPMSSMKVFNEMKSIGCKPNICTYTALVNAFAREGLCEKAEEVF 140
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
MQ +G P Y +++ + A + A E+F + + +PD+ +++++ Y
Sbjct: 141 EEMQQAGHEPDVYAYNALMEAYSRAGLPQGASEIFSLM---QHMGCEPDRASYNILVDAY 197
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFET---NYKEVSKIYDQMQRAGLQPDV 271
+AG +E A +F + +RG+ + ++ L++ N ++ Q+ ++GL PD
Sbjct: 198 GRAGLHEDAEAVFEELKQRGMSPTMKSHMLLLAAHARSGNATRCEEVMAQLHKSGLTPDT 257
Query: 272 VSYALLINAYGKARR---EEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTV 328
+ ++NAY +A R E A E DA V YN+ ++A+ +G V +
Sbjct: 258 FALNAMLNAYARAGRLDDMERLFAAMERRGDADV----GTYNVAVNAYGRAGYVGRMEAA 313
Query: 329 FKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAK 388
F + + D+ ++T + AY + + G P+ T L+ +
Sbjct: 314 FAAVAARGLAADVVTWTARMGAYARRKEYGRCVGMVEEMVDAGCYPDAGTARVLLAACSD 373
Query: 389 VNNLEKMMEIYDKMRVNGIKPNQTIFT 415
+E++ I M K +T+FT
Sbjct: 374 ERQVEQVTAIVRSMH----KKPKTLFT 396
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 89/193 (46%)
Query: 297 MLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASD 356
+L+A PT Y +LL A+ +G + +A V MR P+ Y L + A
Sbjct: 3 LLEAQCVPTEDTYALLLRAYCNAGSLHRAEGVISEMREHGIPPNATVYNAYLDGLLKARC 62
Query: 357 MEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTT 416
E A + ++R+K++ N T+ +I Y K M+++++M+ G KPN +T
Sbjct: 63 TEKAVEVYQRMKRERCRANTETFTLMINVYGKAKQPMSSMKVFNEMKSIGCKPNICTYTA 122
Query: 417 IMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPN 476
+++A+ + + A ++EM+ G PD A N L+ A A+E+ H
Sbjct: 123 LVNAFAREGLCEKAEEVFEEMQQAGHEPDVYAYNALMEAYSRAGLPQGASEIFSLMQHMG 182
Query: 477 NEPGINGLSISVD 489
EP +I VD
Sbjct: 183 CEPDRASYNILVD 195
>gi|297741630|emb|CBI32762.3| unnamed protein product [Vitis vinifera]
Length = 648
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 94/370 (25%), Positives = 173/370 (46%), Gaps = 6/370 (1%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + + I Y K+ D ++L+ M K+G A +VV++T L+ + G+ + A+ +F
Sbjct: 263 NVVTYNAFIEGYFKRLDLGGVAEILTLMEKEGVACNVVTYTLLIHGFSNIGKIEEAQRLF 322
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
M+ G Y I+ + K A +F + D+ L P + +I+
Sbjct: 323 EEMREKGIEADVYVYTSIISCNCRSGNVKRALVLFDEMTDK---GLIPSAHTYGALIHGV 379
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETN---YKEVSKIYDQMQRAGLQPDV 271
KAG E A+ L M +G+ + V +N+L+ E ++ M++ GL+ DV
Sbjct: 380 CKAGQMEAAQMLVNEMQGKGIDLNPVIFNTLIDGYCESGMVDEALRLQVVMEKKGLESDV 439
Query: 272 VSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKC 331
+Y + + K R++EA + M++ GV P ++ L+D + G +A+ VF+
Sbjct: 440 FAYNSIASGLCKLNRKDEAKGLLFSMVERGVSPNTMSFTTLIDIYCKEGNFVEAKRVFRE 499
Query: 332 MRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNN 391
M P+I +Y ++ Y +M+ A K L+ G +P+V T +LI G
Sbjct: 500 MEEKGNVPNIITYNVLIDGYSKRGNMKEAHKLKDELENRGLIPDVYTCTSLIHGECIDGK 559
Query: 392 LEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNI 451
++ ++++D+M G+ PN +T ++ K+ + A Y EM+ G PD +
Sbjct: 560 VDMALKLFDEMPQRGLVPNVVTYTAMISGLSKDGRSEEAFKLYDEMKETGLTPDDTVYSS 619
Query: 452 LLSLAKTADE 461
L+ +ADE
Sbjct: 620 LVGSLHSADE 629
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 90/379 (23%), Positives = 169/379 (44%), Gaps = 8/379 (2%)
Query: 94 FNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAI 153
F E F +L Y F +A + M KKG+ S + A RGG+ +
Sbjct: 157 FKEKFFDLLFRVYADNKMFGEALEAFEHMEKKGFHIDERSCLVYLLALRRGGQVDSCLRF 216
Query: 154 FRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSP-LKPDQKMFHMMIY 212
FRRM + + + I+L + E+ L+DE + +K + ++ I
Sbjct: 217 FRRMVNLDVEVTVYSLTIVLDGLCKRGDV----EMGRKLMDEVAAKGVKANVVTYNAFIE 272
Query: 213 MYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNY---KEVSKIYDQMQRAGLQP 269
Y K ++ LM + GV + VTY L+ +N +E +++++M+ G++
Sbjct: 273 GYFKRLDLGGVAEILTLMEKEGVACNVVTYTLLIHGFSNIGKIEEAQRLFEEMREKGIEA 332
Query: 270 DVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVF 329
DV Y +I+ ++ + AL +F+EM D G+ P+ Y L+ +G ++ A+ +
Sbjct: 333 DVYVYTSIISCNCRSGNVKRALVLFDEMTDKGLIPSAHTYGALIHGVCKAGQMEAAQMLV 392
Query: 330 KCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKV 389
M+ + + T++ Y + ++ A + +++ G +V Y ++ G K+
Sbjct: 393 NEMQGKGIDLNPVIFNTLIDGYCESGMVDEALRLQVVMEKKGLESDVFAYNSIASGLCKL 452
Query: 390 NNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAK 449
N ++ + M G+ PN FTT++D Y K +F A ++EME G P+
Sbjct: 453 NRKDEAKGLLFSMVERGVSPNTMSFTTLIDIYCKEGNFVEAKRVFREMEEKGNVPNIITY 512
Query: 450 NILLSLAKTADERNEANEL 468
N+L+ EA++L
Sbjct: 513 NVLIDGYSKRGNMKEAHKL 531
Score = 98.6 bits (244), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 73/324 (22%), Positives = 140/324 (43%), Gaps = 6/324 (1%)
Query: 169 YQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFA 228
+ ++ +++ + F EA E F + EK D++ + + ++ G + + F
Sbjct: 162 FDLLFRVYADNKMFGEALEAFEHM---EKKGFHIDERSCLVYLLALRRGGQVDSCLRFFR 218
Query: 229 LMAERGVQQSTVTYNSLMSFETNYKEVS---KIYDQMQRAGLQPDVVSYALLINAYGKAR 285
M V+ + + ++ +V K+ D++ G++ +VV+Y I Y K
Sbjct: 219 RMVNLDVEVTVYSLTIVLDGLCKRGDVEMGRKLMDEVAAKGVKANVVTYNAFIEGYFKRL 278
Query: 286 REEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYT 345
+ M GV Y +L+ F+ G +++A+ +F+ MR D+ YT
Sbjct: 279 DLGGVAEILTLMEKEGVACNVVTYTLLIHGFSNIGKIEEAQRLFEEMREKGIEADVYVYT 338
Query: 346 TMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVN 405
+++S + +++ A F + G +P+ TYG LI G K +E + ++M+
Sbjct: 339 SIISCNCRSGNVKRALVLFDEMTDKGLIPSAHTYGALIHGVCKAGQMEAAQMLVNEMQGK 398
Query: 406 GIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEA 465
GI N IF T++D Y ++ D A+ ME G D A N + S + ++EA
Sbjct: 399 GIDLNPVIFNTLIDGYCESGMVDEALRLQVVMEKKGLESDVFAYNSIASGLCKLNRKDEA 458
Query: 466 NELLGNFNHPNNEPGINGLSISVD 489
LL + P + +D
Sbjct: 459 KGLLFSMVERGVSPNTMSFTTLID 482
>gi|125540047|gb|EAY86442.1| hypothetical protein OsI_07823 [Oryza sativa Indica Group]
Length = 703
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 96/347 (27%), Positives = 160/347 (46%), Gaps = 10/347 (2%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
+I + ++ D A + LS M + G+ P + +L+ Y R + A +F +M G
Sbjct: 17 VIRSLCRRADLASALRYLSLMVRSGWRPDAYTFNSLIVGYCRTNQVDVARDLFDKMPLRG 76
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
++Y +++ F E + EA E+F + D+ PD M+ ++ KAG E
Sbjct: 77 FAQDVVSYAALIEGFCETGRIDEAVELFGEM-DQ------PDMHMYAALVKGLCKAGRGE 129
Query: 222 KARKLFALMAERGVQQSTVTYNSLMSF---ETNYKEVSKIYDQMQRAGLQPDVVSYALLI 278
+ + M E G + ST Y +++ F E KE ++ +M GL P VV+ +I
Sbjct: 130 EGLLMLRRMKELGWRPSTRAYAAVVDFRCWERKAKEAEEMLQEMFEKGLAPCVVTCTAVI 189
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCS 338
NAY K R +AL V E M G +P YN L+ F G V +A + MR +
Sbjct: 190 NAYCKEGRMSDALRVLELMKLRGCKPNVWTYNALVQGFCNEGKVHKAMALLNKMRVCGVN 249
Query: 339 PDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEI 398
PD +Y ++ +E A + R ++ DG + + TY LI K ++ +
Sbjct: 250 PDAVTYNLLIRGQCIDGHIESAFRLLRLMEGDGLIADQYTYNALINALCKDGRTDQACSL 309
Query: 399 YDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPD 445
+D + GIKPN F ++++ K+ D A + ++M S G PD
Sbjct: 310 FDSLETRGIKPNAVTFNSLINGLCKSGKVDIAWKFLEKMVSAGCTPD 356
Score = 129 bits (324), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 100/418 (23%), Positives = 171/418 (40%), Gaps = 37/418 (8%)
Query: 86 LRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGG 145
L ++S W + F LI Y + + A + M +G+A VVS+ AL+E + G
Sbjct: 36 LMVRSGWRPDAYTFNSLIVGYCRTNQVDVARDLFDKMPLRGFAQDVVSYAALIEGFCETG 95
Query: 146 RYKNAEAIF-------------------------------RRMQSSGPRPSALTYQIILK 174
R A +F RRM+ G RPS Y ++
Sbjct: 96 RIDEAVELFGEMDQPDMHMYAALVKGLCKAGRGEEGLLMLRRMKELGWRPSTRAYAAVVD 155
Query: 175 LFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERG 234
K KEAEE+ + ++ L P +I Y K G A ++ LM RG
Sbjct: 156 FRCWERKAKEAEEMLQEMFEK---GLAPCVVTCTAVINAYCKEGRMSDALRVLELMKLRG 212
Query: 235 VQQSTVTYNSLMSFETNYKEVSK---IYDQMQRAGLQPDVVSYALLINAYGKARREEEAL 291
+ + TYN+L+ N +V K + ++M+ G+ PD V+Y LLI E A
Sbjct: 213 CKPNVWTYNALVQGFCNEGKVHKAMALLNKMRVCGVNPDAVTYNLLIRGQCIDGHIESAF 272
Query: 292 AVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAY 351
+ M G+ YN L++A G DQA ++F + P+ ++ ++++
Sbjct: 273 RLLRLMEGDGLIADQYTYNALINALCKDGRTDQACSLFDSLETRGIKPNAVTFNSLINGL 332
Query: 352 VNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQ 411
+ ++ A KF ++ G P+ TY + I+ K+ ++ + +M +KP+
Sbjct: 333 CKSGKVDIAWKFLEKMVSAGCTPDTYTYSSFIEHLCKMKGSQEGLSFIGEMLQKDVKPST 392
Query: 412 TIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELL 469
+T ++ K +++ + EM S G PD + NEA +L
Sbjct: 393 VNYTIVIHKLLKERNYGLVARTWGEMVSSGCNPDVVTYTTSMRAYCIEGRLNEAENVL 450
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 97/399 (24%), Positives = 172/399 (43%), Gaps = 23/399 (5%)
Query: 101 MLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSS 160
+LI G A ++L M G ++ AL+ A + GR A ++F +++
Sbjct: 257 LLIRGQCIDGHIESAFRLLRLMEGDGLIADQYTYNALINALCKDGRTDQACSLFDSLETR 316
Query: 161 GPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGY 220
G +P+A+T+ ++ ++ K A + ++ + PD + I K G
Sbjct: 317 GIKPNAVTFNSLINGLCKSGKVDIAWKFLEKMVS---AGCTPDTYTYSSFIEHLCKMKGS 373
Query: 221 EKARKLFALMAERGVQQSTVTYNSLMSF---ETNYKEVSKIYDQMQRAGLQPDVVSYALL 277
++ M ++ V+ STV Y ++ E NY V++ + +M +G PDVV+Y
Sbjct: 374 QEGLSFIGEMLQKDVKPSTVNYTIVIHKLLKERNYGLVARTWGEMVSSGCNPDVVTYTTS 433
Query: 278 INAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRC 337
+ AY R EA V EM GV AYN L+D A G D A ++ K M
Sbjct: 434 MRAYCIEGRLNEAENVLMEMSKNGVTVDTMAYNTLMDGHASIGQTDHAVSILKQMTSVAS 493
Query: 338 SPDICSYTTMLSAYV-----------------NASDMEGAEKFFRRLKQDGFVPNVITYG 380
P+ +Y +L V A ++ F +K++ F+PN TY
Sbjct: 494 VPNQFTYFILLRHLVRMRLVEDVLPLTPAGVWKAIELTDVFGLFDVMKKNEFLPNSGTYS 553
Query: 381 TLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESC 440
++++G+++ E+ + M+ + I N+ I+T ++ + K+K + A V M
Sbjct: 554 SILEGFSEDGRTEEATSLVSLMKEDSISLNEDIYTALVTCFCKSKRYLDAWVLVCSMIQH 613
Query: 441 GFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEP 479
GF P + LLS + ++A E+ N + P
Sbjct: 614 GFIPHLMSYQHLLSGLICEGQTDKAKEIFMNSRWKDYSP 652
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 92/394 (23%), Positives = 170/394 (43%), Gaps = 63/394 (15%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
+I AY K+G + A +VL M +G P+V ++ AL++ + G+ A A+ +M+ G
Sbjct: 188 VINAYCKEGRMSDALRVLELMKLRGCKPNVWTYNALVQGFCNEGKVHKAMALLNKMRVCG 247
Query: 162 PRPSALTYQIILK-LFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGY 220
P A+TY ++++ ++ + E F L E L DQ ++ +I K G
Sbjct: 248 VNPDAVTYNLLIRGQCIDGH----IESAFRLLRLMEGDGLIADQYTYNALINALCKDGRT 303
Query: 221 EKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVS---KIYDQMQRAGLQPDVVSYALL 277
++A LF + RG++ + VT+NSL++ +V K ++M AG PD +Y+
Sbjct: 304 DQACSLFDSLETRGIKPNAVTFNSLINGLCKSGKVDIAWKFLEKMVSAGCTPDTYTYSSF 363
Query: 278 INAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLD----------------------- 314
I K + +E L+ EML V+P+ Y I++
Sbjct: 364 IEHLCKMKGSQEGLSFIGEMLQKDVKPSTVNYTIVIHKLLKERNYGLVARTWGEMVSSGC 423
Query: 315 ------------AFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEK 362
A+ I G +++A V M ++ + D +Y T++ + + + A
Sbjct: 424 NPDVVTYTTSMRAYCIEGRLNEAENVLMEMSKNGVTVDTMAYNTLMDGHASIGQTDHAVS 483
Query: 363 FFRRLKQDGFVPNVITYGTLIK-----------------GYAKVNNLEKMMEIYDKMRVN 405
+++ VPN TY L++ G K L + ++D M+ N
Sbjct: 484 ILKQMTSVASVPNQFTYFILLRHLVRMRLVEDVLPLTPAGVWKAIELTDVFGLFDVMKKN 543
Query: 406 GIKPNQTIFTTIMDAY---GKNKDFDSAVVWYKE 436
PN +++I++ + G+ ++ S V KE
Sbjct: 544 EFLPNSGTYSSILEGFSEDGRTEEATSLVSLMKE 577
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 81/300 (27%), Positives = 134/300 (44%), Gaps = 12/300 (4%)
Query: 197 KSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVS 256
+S +PD F+ +I Y + + AR LF M RG Q V+Y +L+ + E
Sbjct: 39 RSGWRPDAYTFNSLIVGYCRTNQVDVARDLFDKMPLRGFAQDVVSYAALIE---GFCETG 95
Query: 257 KIYDQMQRAGL--QPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLD 314
+I + ++ G QPD+ YA L+ KA R EE L + M + G RP+ +AY ++D
Sbjct: 96 RIDEAVELFGEMDQPDMHMYAALVKGLCKAGRGEEGLLMLRRMKELGWRPSTRAYAAVVD 155
Query: 315 AFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVP 374
+A + + M +P + + T +++AY M A + +K G P
Sbjct: 156 FRCWERKAKEAEEMLQEMFEKGLAPCVVTCTAVINAYCKEGRMSDALRVLELMKLRGCKP 215
Query: 375 NVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWY 434
NV TY L++G+ + K M + +KMRV G+ P+ + ++ + +SA
Sbjct: 216 NVWTYNALVQGFCNEGKVHKAMALLNKMRVCGVNPDAVTYNLLIRGQCIDGHIESAFRLL 275
Query: 435 KEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPG-------INGLSIS 487
+ ME G DQ N L++ ++A L + +P INGL S
Sbjct: 276 RLMEGDGLIADQYTYNALINALCKDGRTDQACSLFDSLETRGIKPNAVTFNSLINGLCKS 335
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 71/354 (20%), Positives = 138/354 (38%), Gaps = 23/354 (6%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + F LI K G + A K L M G P ++++ +E + + +
Sbjct: 321 NAVTFNSLINGLCKSGKVDIAWKFLEKMVSAGCTPDTYTYSSFIEHLCKMKGSQEGLSFI 380
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
M +PS + Y I++ ++ + + ++ S PD + + Y
Sbjct: 381 GEMLQKDVKPSTVNYTIVIHKLLKERNYGLVARTWGEMVS---SGCNPDVVTYTTSMRAY 437
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVS---KIYDQMQRAGLQPDV 271
G +A + M++ GV T+ YN+LM + + I QM P+
Sbjct: 438 CIEGRLNEAENVLMEMSKNGVTVDTMAYNTLMDGHASIGQTDHAVSILKQMTSVASVPNQ 497
Query: 272 VSYALLINAYGKARREEEAL-----------------AVFEEMLDAGVRPTHKAYNILLD 314
+Y +L+ + R E+ L +F+ M P Y+ +L+
Sbjct: 498 FTYFILLRHLVRMRLVEDVLPLTPAGVWKAIELTDVFGLFDVMKKNEFLPNSGTYSSILE 557
Query: 315 AFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVP 374
F+ G ++A ++ M+ D S + YT +++ + + A + Q GF+P
Sbjct: 558 GFSEDGRTEEATSLVSLMKEDSISLNEDIYTALVTCFCKSKRYLDAWVLVCSMIQHGFIP 617
Query: 375 NVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFD 428
++++Y L+ G +K EI+ R P++ ++ I+D K D
Sbjct: 618 HLMSYQHLLSGLICEGQTDKAKEIFMNSRWKDYSPDEIVWKVIIDGLIKKGHSD 671
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 63/315 (20%), Positives = 122/315 (38%), Gaps = 53/315 (16%)
Query: 105 AYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRP 164
AY +G N+AE VL M+K G +++ LM+ + G+ +A +I ++M S P
Sbjct: 436 AYCIEGRLNEAENVLMEMSKNGVTVDTMAYNTLMDGHASIGQTDHAVSILKQMTSVASVP 495
Query: 165 SALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKAR 224
+ TY I+L+ V + + E+V PL P G KA
Sbjct: 496 NQFTYFILLRHLV---RMRLVEDVL---------PLTP---------------AGVWKAI 528
Query: 225 KLFALMAERGVQQSTVTYNSLMSFETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKA 284
+L +V ++D M++ P+ +Y+ ++ + +
Sbjct: 529 EL--------------------------TDVFGLFDVMKKNEFLPNSGTYSSILEGFSED 562
Query: 285 RREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSY 344
R EEA ++ M + + Y L+ F S A + M + P + SY
Sbjct: 563 GRTEEATSLVSLMKEDSISLNEDIYTALVTCFCKSKRYLDAWVLVCSMIQHGFIPHLMSY 622
Query: 345 TTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRV 404
+LS + + A++ F + + P+ I + +I G K + + E+ +
Sbjct: 623 QHLLSGLICEGQTDKAKEIFMNSRWKDYSPDEIVWKVIIDGLIKKGHSDISREMIIMLER 682
Query: 405 NGIKPNQTIFTTIMD 419
+P+ + + +
Sbjct: 683 MNCRPSHQTYAMLTE 697
>gi|449448914|ref|XP_004142210.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
chloroplastic-like [Cucumis sativus]
gi|449525343|ref|XP_004169677.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
chloroplastic-like [Cucumis sativus]
Length = 768
Score = 146 bits (369), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 107/437 (24%), Positives = 199/437 (45%), Gaps = 10/437 (2%)
Query: 36 NQIEEVGSAVAVLRSERTRGQPLPKDLVLGTLVRLKQLKKWNVVSEVLEWLRIQSWWDFN 95
N+++ V SA + + R R ++++ L + Q++ ++ E + + +
Sbjct: 182 NKLKLVESAHSSMVRRRIRHDVSTFNILIKALCKAHQVRPAILMMEEMPSYGLSP----D 237
Query: 96 EMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFR 155
E F ++ Y + G+ + A ++ M + G + V+ L+ + + GR A + +
Sbjct: 238 ETTFTTIMQGYIEGGNLDGALRIKEQMVEYGCPCTDVTVNVLINGFCKQGRIDQALSFIQ 297
Query: 156 RMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYK 215
S G RP TY ++ + K A EV +L L PD ++ +I
Sbjct: 298 EAVSEGFRPDQFTYNTLVNGLCKIGHAKHAMEVVDAML---LGGLDPDIYTYNSLISGLC 354
Query: 216 KAGGYEKARKLFALMAERGVQQSTVTYNSLMSF---ETNYKEVSKIYDQMQRAGLQPDVV 272
K G E+A K+ M R + VTYN+++S E E ++I + G+ PDV
Sbjct: 355 KLGEIEEAVKILDQMVSRDCSPNAVTYNAIISSLCKENRVDEATEIARLLTSKGILPDVC 414
Query: 273 SYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCM 332
++ LI + + A+ +FEEM G RP YN+L+D+ S +++A + K M
Sbjct: 415 TFNSLIQGLCLSSNHKSAMDLFEEMKGKGCRPDEFTYNMLIDSLCSSRKLEEALNLLKEM 474
Query: 333 RRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNL 392
+ C+ ++ Y T++ + +E AE+ F ++ G + +TY TLI G K +
Sbjct: 475 ELNGCARNVVIYNTLIDGFCKNKRIEEAEEIFDEMELQGVSRDSVTYNTLIDGLCKSKRV 534
Query: 393 EKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNIL 452
E ++ D+M + G++P++ + +++ + K D A + M S G PD L
Sbjct: 535 EDAAQLMDQMIMEGLRPDKFTYNSLLTHFCKTGDIKKAADIVQTMTSSGCNPDIVTYATL 594
Query: 453 LSLAKTADERNEANELL 469
+S A A+ LL
Sbjct: 595 ISGLCKAGRVQVASRLL 611
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 84/305 (27%), Positives = 152/305 (49%), Gaps = 8/305 (2%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
LI+ K G+ +A K+L M + +P+ V++ A++ + + R A I R + S G
Sbjct: 349 LISGLCKLGEIEEAVKILDQMVSRDCSPNAVTYNAIISSLCKENRVDEATEIARLLTSKG 408
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSP-LKPDQKMFHMMIYMYKKAGGY 220
P T+ +++ ++ K A M L +E K +PD+ ++M+I +
Sbjct: 409 ILPDVCTFNSLIQGLCLSSNHKSA----MDLFEEMKGKGCRPDEFTYNMLIDSLCSSRKL 464
Query: 221 EKARKLFALMAERGVQQSTVTYNSLM-SFETNYK--EVSKIYDQMQRAGLQPDVVSYALL 277
E+A L M G ++ V YN+L+ F N + E +I+D+M+ G+ D V+Y L
Sbjct: 465 EEALNLLKEMELNGCARNVVIYNTLIDGFCKNKRIEEAEEIFDEMELQGVSRDSVTYNTL 524
Query: 278 INAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRC 337
I+ K++R E+A + ++M+ G+RP YN LL F +G + +A + + M C
Sbjct: 525 IDGLCKSKRVEDAAQLMDQMIMEGLRPDKFTYNSLLTHFCKTGDIKKAADIVQTMTSSGC 584
Query: 338 SPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMME 397
+PDI +Y T++S A ++ A + R ++ G V Y +I+ K N + M
Sbjct: 585 NPDIVTYATLISGLCKAGRVQVASRLLRSIQMKGMVLTPHAYNPVIQALFKRNRTHEAMR 644
Query: 398 IYDKM 402
++ +M
Sbjct: 645 LFREM 649
Score = 121 bits (304), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 90/354 (25%), Positives = 158/354 (44%), Gaps = 6/354 (1%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
L+ K G A +V+ M G P + ++ +L+ + G + A I +M S
Sbjct: 314 LVNGLCKIGHAKHAMEVVDAMLLGGLDPDIYTYNSLISGLCKLGEIEEAVKILDQMVSRD 373
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
P+A+TY I+ + N+ EA E+ L + + PD F+ +I + ++
Sbjct: 374 CSPNAVTYNAIISSLCKENRVDEATEIARLLTSKG---ILPDVCTFNSLIQGLCLSSNHK 430
Query: 222 KARKLFALMAERGVQQSTVTYNSLM-SFETNYK--EVSKIYDQMQRAGLQPDVVSYALLI 278
A LF M +G + TYN L+ S ++ K E + +M+ G +VV Y LI
Sbjct: 431 SAMDLFEEMKGKGCRPDEFTYNMLIDSLCSSRKLEEALNLLKEMELNGCARNVVIYNTLI 490
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCS 338
+ + K +R EEA +F+EM GV YN L+D S V+ A + M +
Sbjct: 491 DGFCKNKRIEEAEEIFDEMELQGVSRDSVTYNTLIDGLCKSKRVEDAAQLMDQMIMEGLR 550
Query: 339 PDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEI 398
PD +Y ++L+ + D++ A + + G P+++TY TLI G K ++ +
Sbjct: 551 PDKFTYNSLLTHFCKTGDIKKAADIVQTMTSSGCNPDIVTYATLISGLCKAGRVQVASRL 610
Query: 399 YDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNIL 452
+++ G+ + ++ A K A+ ++EM PPD I+
Sbjct: 611 LRSIQMKGMVLTPHAYNPVIQALFKRNRTHEAMRLFREMLDKSEPPDAITYKIV 664
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 106/471 (22%), Positives = 197/471 (41%), Gaps = 47/471 (9%)
Query: 24 DEAGKKNWRRLMNQIEEVGSAVAVLRSERTRGQPLPKDLVLGTLVR-LKQLKKWNVVSEV 82
D K+ L Q +EV +A+ V + +P V ++R L + + + V
Sbjct: 61 DFTPKQLIETLRRQTDEV-AALRVFNWASKQPNFVPSSSVYEEILRKLGKAGSFEYMRRV 119
Query: 83 LEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFM-NKKGYAPSVVSHTALMEAY 141
LE +++ S +F+ FL+ + +YGK +++ ++ M ++ P + L+
Sbjct: 120 LEEMKL-SGCEFDRGIFLIFVESYGKFELYDEVVGIVKVMEDEYRIKPDTRFYNVLLNVL 178
Query: 142 GRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKS-PL 200
+ K E+ M R T+ I++K +A++ + A + +++E S L
Sbjct: 179 VDANKLKLVESAHSSMVRRRIRHDVSTFNILIKALCKAHQVRPA----ILMMEEMPSYGL 234
Query: 201 KPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMS------------- 247
PD+ F ++ Y + G + A ++ M E G + VT N L++
Sbjct: 235 SPDETTFTTIMQGYIEGGNLDGALRIKEQMVEYGCPCTDVTVNVLINGFCKQGRIDQALS 294
Query: 248 --------------FETNY-----------KEVSKIYDQMQRAGLQPDVVSYALLINAYG 282
F N K ++ D M GL PD+ +Y LI+
Sbjct: 295 FIQEAVSEGFRPDQFTYNTLVNGLCKIGHAKHAMEVVDAMLLGGLDPDIYTYNSLISGLC 354
Query: 283 KARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDIC 342
K EEA+ + ++M+ P YN ++ + VD+A + + + PD+C
Sbjct: 355 KLGEIEEAVKILDQMVSRDCSPNAVTYNAIISSLCKENRVDEATEIARLLTSKGILPDVC 414
Query: 343 SYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKM 402
++ +++ +S+ + A F +K G P+ TY LI LE+ + + +M
Sbjct: 415 TFNSLIQGLCLSSNHKSAMDLFEEMKGKGCRPDEFTYNMLIDSLCSSRKLEEALNLLKEM 474
Query: 403 RVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILL 453
+NG N I+ T++D + KNK + A + EME G D N L+
Sbjct: 475 ELNGCARNVVIYNTLIDGFCKNKRIEEAEEIFDEMELQGVSRDSVTYNTLI 525
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 76/346 (21%), Positives = 148/346 (42%), Gaps = 44/346 (12%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + + +I++ K+ ++A ++ + KG P V + +L++ +K+A +F
Sbjct: 377 NAVTYNAIISSLCKENRVDEATEIARLLTSKGILPDVCTFNSLIQGLCLSSNHKSAMDLF 436
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDE-EKSPLKPDQKMFHMMIYM 213
M+ G RP TY +++ + K +EA + LL E E + + +++ +I
Sbjct: 437 EEMKGKGCRPDEFTYNMLIDSLCSSRKLEEA----LNLLKEMELNGCARNVVIYNTLIDG 492
Query: 214 YKKAGGYEKARKLFALMAERGVQQSTVTYNSLM--------------------------- 246
+ K E+A ++F M +GV + +VTYN+L+
Sbjct: 493 FCKNKRIEEAEEIFDEMELQGVSRDSVTYNTLIDGLCKSKRVEDAAQLMDQMIMEGLRPD 552
Query: 247 -----SFETNY------KEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFE 295
S T++ K+ + I M +G PD+V+YA LI+ KA R + A +
Sbjct: 553 KFTYNSLLTHFCKTGDIKKAADIVQTMTSSGCNPDIVTYATLISGLCKAGRVQVASRLLR 612
Query: 296 EMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNAS 355
+ G+ T AYN ++ A +A +F+ M PD +Y + N
Sbjct: 613 SIQMKGMVLTPHAYNPVIQALFKRNRTHEAMRLFREMLDKSEPPDAITYKIVYRGLCNGG 672
Query: 356 DMEG-AEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYD 400
G A F + + G +P ++ L +G ++ + ++++ D
Sbjct: 673 GPIGEAVDFTVEMIERGNIPEFSSFVMLAEGLCTLSMDDTLVKLVD 718
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/195 (25%), Positives = 89/195 (45%), Gaps = 5/195 (2%)
Query: 265 AGLQPDVVS----YALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISG 320
A QP+ V Y ++ GKA E V EEM +G + I ++++
Sbjct: 87 ASKQPNFVPSSSVYEEILRKLGKAGSFEYMRRVLEEMKLSGCEFDRGIFLIFVESYGKFE 146
Query: 321 MVDQARTVFKCMRRD-RCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITY 379
+ D+ + K M + R PD Y +L+ V+A+ ++ E + + +V T+
Sbjct: 147 LYDEVVGIVKVMEDEYRIKPDTRFYNVLLNVLVDANKLKLVESAHSSMVRRRIRHDVSTF 206
Query: 380 GTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMES 439
LIK K + + + + ++M G+ P++T FTTIM Y + + D A+ ++M
Sbjct: 207 NILIKALCKAHQVRPAILMMEEMPSYGLSPDETTFTTIMQGYIEGGNLDGALRIKEQMVE 266
Query: 440 CGFPPDQKAKNILLS 454
G P N+L++
Sbjct: 267 YGCPCTDVTVNVLIN 281
>gi|225432738|ref|XP_002279088.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22670,
mitochondrial [Vitis vinifera]
Length = 535
Score = 146 bits (369), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 100/406 (24%), Positives = 197/406 (48%), Gaps = 9/406 (2%)
Query: 42 GSAVAVLRSERTRGQPLPKDLVLGTLVRLKQLKKWNVVSEVLEWLRIQSWWDFNEMDFLM 101
SA AV+++ G + + LV L R W +W + Q+ + + +
Sbjct: 101 SSADAVVQALGGCGVSVSESLVEQVLKRFSN--DWIPAFGFFKWAKAQTGYRHSMNSYNS 158
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
++ GK F+ +++ M++ G S+ + T +M R R+K+A FR M+ G
Sbjct: 159 MVDILGKLKKFDLMWELVEEMDRLGGYVSLATMTKVMRRLARASRWKDAIEAFRGMERFG 218
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
+ L ++ V+ N + A +VF+ E K + + F+++I+ + KA +
Sbjct: 219 VKKDTLAMNTLMDALVKENSVEHANDVFV----EFKDSILLNPHTFNVLIHGWCKARKMD 274
Query: 222 KARKLFALMAERGVQQSTVTYNSLM---SFETNYKEVSKIYDQMQRAGLQPDVVSYALLI 278
A K A M E G ++Y S++ E ++++V+ + ++M+ G P+VV+Y +++
Sbjct: 275 NALKSMAEMKEHGFCPDVISYTSIVEAYCREKDFRKVNSVLNEMEEKGCPPNVVTYTIVM 334
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCS 338
+A GK + +AL V+E+M + P Y+ L+ + +G + AR VF+ M +
Sbjct: 335 HALGKGKEISKALEVYEKMKGSSCVPDTSFYSSLIYILSKAGRLKDARDVFEDMTKQGAI 394
Query: 339 PDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEI 398
PD+ +Y TM+SA S E A K ++++ P++ TY L+K + N ++ + +
Sbjct: 395 PDVLTYNTMISAACMHSQEEDALKLLLKMEESSCKPDLNTYSPLLKMCCRNNRMKVLSAL 454
Query: 399 YDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPP 444
+ M N I ++ ++ K+ + A ++++EM S G P
Sbjct: 455 LNHMFKNDISLEVGTYSLLVHGLCKSGKLEHACLFFEEMVSKGLVP 500
Score = 101 bits (252), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 65/286 (22%), Positives = 126/286 (44%), Gaps = 35/286 (12%)
Query: 94 FNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAI 153
N F +LI + K + A K ++ M + G+ P V+S+T+++EAY R ++ ++
Sbjct: 255 LNPHTFNVLIHGWCKARKMDNALKSMAEMKEHGFCPDVISYTSIVEAYCREKDFRKVNSV 314
Query: 154 FRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYM 213
M+ G P+ +TY I++ + + +A EV+ + + S PD + +IY+
Sbjct: 315 LNEMEEKGCPPNVVTYTIVMHALGKGKEISKALEVYEKM---KGSSCVPDTSFYSSLIYI 371
Query: 214 YKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSKIYDQMQRAGLQPDVVS 273
KAG + AR +F + M + G PDV++
Sbjct: 372 LSKAGRLKDARDVF--------------------------------EDMTKQGAIPDVLT 399
Query: 274 YALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMR 333
Y +I+A +EE+AL + +M ++ +P Y+ LL + + + M
Sbjct: 400 YNTMISAACMHSQEEDALKLLLKMEESSCKPDLNTYSPLLKMCCRNNRMKVLSALLNHMF 459
Query: 334 RDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITY 379
++ S ++ +Y+ ++ + +E A FF + G VP T+
Sbjct: 460 KNDISLEVGTYSLLVHGLCKSGKLEHACLFFEEMVSKGLVPKDCTH 505
Score = 91.7 bits (226), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 75/343 (21%), Positives = 153/343 (44%), Gaps = 8/343 (2%)
Query: 146 RYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQK 205
R+ +A+A+ + + G S + +LK F +N + A F + ++ +
Sbjct: 99 RHSSADAVVQALGGCGVSVSESLVEQVLKRF--SNDWIPAFGFFK--WAKAQTGYRHSMN 154
Query: 206 MFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLM---SFETNYKEVSKIYDQM 262
++ M+ + K ++ +L M G S T +M + + +K+ + + M
Sbjct: 155 SYNSMVDILGKLKKFDLMWELVEEMDRLGGYVSLATMTKVMRRLARASRWKDAIEAFRGM 214
Query: 263 QRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMV 322
+R G++ D ++ L++A K E A VF E D+ + H +N+L+ + + +
Sbjct: 215 ERFGVKKDTLAMNTLMDALVKENSVEHANDVFVEFKDSILLNPH-TFNVLIHGWCKARKM 273
Query: 323 DQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTL 382
D A M+ PD+ SYT+++ AY D +++ G PNV+TY +
Sbjct: 274 DNALKSMAEMKEHGFCPDVISYTSIVEAYCREKDFRKVNSVLNEMEEKGCPPNVVTYTIV 333
Query: 383 IKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGF 442
+ K + K +E+Y+KM+ + P+ + +++++ K A +++M G
Sbjct: 334 MHALGKGKEISKALEVYEKMKGSSCVPDTSFYSSLIYILSKAGRLKDARDVFEDMTKQGA 393
Query: 443 PPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGINGLS 485
PD N ++S A + +A +LL + +P +N S
Sbjct: 394 IPDVLTYNTMISAACMHSQEEDALKLLLKMEESSCKPDLNTYS 436
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 59/263 (22%), Positives = 118/263 (44%), Gaps = 9/263 (3%)
Query: 216 KAGGYEKARKLFALMAERGVQQSTVTYNSLMSF---ETNYKEVSKIYDQMQRAGL-QPDV 271
+A ++ A + F M GV++ T+ N+LM E + + + ++ + + + L P
Sbjct: 200 RASRWKDAIEAFRGMERFGVKKDTLAMNTLMDALVKENSVEHANDVFVEFKDSILLNPH- 258
Query: 272 VSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKC 331
++ +LI+ + KAR+ + AL EM + G P +Y +++A+ + +V
Sbjct: 259 -TFNVLIHGWCKARKMDNALKSMAEMKEHGFCPDVISYTSIVEAYCREKDFRKVNSVLNE 317
Query: 332 MRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNN 391
M C P++ +YT ++ A ++ A + + ++K VP+ Y +LI +K
Sbjct: 318 MEEKGCPPNVVTYTIVMHALGKGKEISKALEVYEKMKGSSCVPDTSFYSSLIYILSKAGR 377
Query: 392 LEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNI 451
L+ ++++ M G P+ + T++ A + + A+ +ME PD +
Sbjct: 378 LKDARDVFEDMTKQGAIPDVLTYNTMISAACMHSQEEDALKLLLKMEESSCKPDLNTYSP 437
Query: 452 LLSLAKTADERNEANELLGNFNH 474
LL K N L NH
Sbjct: 438 LL---KMCCRNNRMKVLSALLNH 457
>gi|242086476|ref|XP_002443663.1| hypothetical protein SORBIDRAFT_08g023090 [Sorghum bicolor]
gi|241944356|gb|EES17501.1| hypothetical protein SORBIDRAFT_08g023090 [Sorghum bicolor]
Length = 853
Score = 146 bits (369), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 90/317 (28%), Positives = 157/317 (49%), Gaps = 7/317 (2%)
Query: 70 LKQLKKWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAP 129
LK L V +WL+ Q + + + +I G+ F +K+L M++ P
Sbjct: 334 LKLLHDHTVALGFFQWLKRQPGFKHDGHTYTTMIGILGQARQFGVLKKLLDEMSRAHCKP 393
Query: 130 SVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVF 189
+VV++ ++ AYGR K A +F MQ +G P +TY ++ + +A A +++
Sbjct: 394 TVVTYNRIIHAYGRANYLKEAVKVFEEMQEAGYEPDRVTYCTLIDIHAKAGYLDIAMDLY 453
Query: 190 MTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFE 249
+ ++ L PD + M+ K G A KLF M E G + VTYN +++ +
Sbjct: 454 GRM---QEVGLSPDTFTYSAMVNCLGKGGQLAAAYKLFCEMIENGCTPNLVTYNIMIALQ 510
Query: 250 T---NYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTH 306
NY+ V K+Y MQ AG +PD ++Y++++ G +EA AVF EM P
Sbjct: 511 AKARNYENVVKLYKDMQVAGFRPDKITYSIVMEVLGHCGHLDEAEAVFIEMRRDWA-PDE 569
Query: 307 KAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRR 366
Y +L+D + +G VD+A ++ M +D P++ + ++LSA++ + + A +
Sbjct: 570 PVYGLLVDLWGKAGNVDKALGWYQAMLQDGLQPNVPTCNSLLSAFLKMNRFQDAYIVLQN 629
Query: 367 LKQDGFVPNVITYGTLI 383
+ G VP+V TY L+
Sbjct: 630 MLAQGLVPSVQTYTLLL 646
Score = 125 bits (314), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 71/240 (29%), Positives = 125/240 (52%), Gaps = 4/240 (1%)
Query: 229 LMAERGVQQSTVTYNSLMSFETNYKE---VSKIYDQMQRAGLQPDVVSYALLINAYGKAR 285
L + G + TY +++ ++ + K+ D+M RA +P VV+Y +I+AYG+A
Sbjct: 350 LKRQPGFKHDGHTYTTMIGILGQARQFGVLKKLLDEMSRAHCKPTVVTYNRIIHAYGRAN 409
Query: 286 REEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYT 345
+EA+ VFEEM +AG P Y L+D A +G +D A ++ M+ SPD +Y+
Sbjct: 410 YLKEAVKVFEEMQEAGYEPDRVTYCTLIDIHAKAGYLDIAMDLYGRMQEVGLSPDTFTYS 469
Query: 346 TMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVN 405
M++ + A K F + ++G PN++TY +I AK N E ++++Y M+V
Sbjct: 470 AMVNCLGKGGQLAAAYKLFCEMIENGCTPNLVTYNIMIALQAKARNYENVVKLYKDMQVA 529
Query: 406 GIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEA 465
G +P++ ++ +M+ G D A + EM + PD+ +L+ L A ++A
Sbjct: 530 GFRPDKITYSIVMEVLGHCGHLDEAEAVFIEMRR-DWAPDEPVYGLLVDLWGKAGNVDKA 588
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 81/313 (25%), Positives = 152/313 (48%), Gaps = 10/313 (3%)
Query: 168 TYQIILKLFVEANKFKEAEEVFMTLLDE-EKSPLKPDQKMFHMMIYMYKKAGGYEKARKL 226
TY ++ + +A +F V LLDE ++ KP ++ +I+ Y +A ++A K+
Sbjct: 362 TYTTMIGILGQARQFG----VLKKLLDEMSRAHCKPTVVTYNRIIHAYGRANYLKEAVKV 417
Query: 227 FALMAERGVQQSTVTYNSLMSF--ETNYKEVS-KIYDQMQRAGLQPDVVSYALLINAYGK 283
F M E G + VTY +L+ + Y +++ +Y +MQ GL PD +Y+ ++N GK
Sbjct: 418 FEEMQEAGYEPDRVTYCTLIDIHAKAGYLDIAMDLYGRMQEVGLSPDTFTYSAMVNCLGK 477
Query: 284 ARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICS 343
+ A +F EM++ G P YNI++ A + + ++K M+ PD +
Sbjct: 478 GGQLAAAYKLFCEMIENGCTPNLVTYNIMIALQAKARNYENVVKLYKDMQVAGFRPDKIT 537
Query: 344 YTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMR 403
Y+ ++ + ++ AE F +++D + P+ YG L+ + K N++K + Y M
Sbjct: 538 YSIVMEVLGHCGHLDEAEAVFIEMRRD-WAPDEPVYGLLVDLWGKAGNVDKALGWYQAML 596
Query: 404 VNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTAD-ER 462
+G++PN +++ A+ K F A + + M + G P + +LLS A +
Sbjct: 597 QDGLQPNVPTCNSLLSAFLKMNRFQDAYIVLQNMLAQGLVPSVQTYTLLLSCCTEAQAQM 656
Query: 463 NEANELLGNFNHP 475
+L+ HP
Sbjct: 657 GLCGQLMAITGHP 669
Score = 47.8 bits (112), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 53/116 (45%), Gaps = 1/116 (0%)
Query: 356 DMEGAEKFFRRLK-QDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIF 414
D A FF+ LK Q GF + TY T+I + + ++ D+M KP +
Sbjct: 339 DHTVALGFFQWLKRQPGFKHDGHTYTTMIGILGQARQFGVLKKLLDEMSRAHCKPTVVTY 398
Query: 415 TTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLG 470
I+ AYG+ AV ++EM+ G+ PD+ L+ + A + A +L G
Sbjct: 399 NRIIHAYGRANYLKEAVKVFEEMQEAGYEPDRVTYCTLIDIHAKAGYLDIAMDLYG 454
Score = 47.4 bits (111), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 47/88 (53%)
Query: 92 WDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAE 151
W +E + +L+ +GK G+ +KA M + G P+V + +L+ A+ + R+++A
Sbjct: 565 WAPDEPVYGLLVDLWGKAGNVDKALGWYQAMLQDGLQPNVPTCNSLLSAFLKMNRFQDAY 624
Query: 152 AIFRRMQSSGPRPSALTYQIILKLFVEA 179
+ + M + G PS TY ++L EA
Sbjct: 625 IVLQNMLAQGLVPSVQTYTLLLSCCTEA 652
>gi|224100421|ref|XP_002311869.1| predicted protein [Populus trichocarpa]
gi|222851689|gb|EEE89236.1| predicted protein [Populus trichocarpa]
Length = 470
Score = 146 bits (369), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 93/371 (25%), Positives = 173/371 (46%), Gaps = 6/371 (1%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
+I K G + AE+VL M +G P V +T L++ + + G + A +F M+
Sbjct: 51 IILLLCKSGKVDDAERVLREMINQGIVPDTVVYTTLIDGFCKLGNIQAAYKLFDEMEKQR 110
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
P + Y ++ K EA++VF + ++PD+ + +I Y K+G E
Sbjct: 111 IVPDFIAYTAVICGLCRCGKMMEADKVFNKMFSR---GVEPDEVTYTTLIDGYCKSGEME 167
Query: 222 KARKLFALMAERGVQQSTVTYNSLMSFETNYKEV---SKIYDQMQRAGLQPDVVSYALLI 278
KA L M + G+ + VTY +L +V +++ +M GLQ ++ +Y L+
Sbjct: 168 KAFSLHNQMVQSGLTPNVVTYTALADGLCKLGQVDTANELLHEMCGKGLQLNICTYNSLV 227
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCS 338
N K+ +A+ + EEM AG+ P + L+DA+ +G + +A + + M
Sbjct: 228 NGLCKSGNIRQAVKLMEEMEVAGMYPDTITFTTLMDAYCKTGEMVKAHELLREMLDRGLQ 287
Query: 339 PDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEI 398
P + ++ +++ + + +E E+ + + G +PN TY +L+K Y NN+ EI
Sbjct: 288 PTVITFNVLMNGFCMSGMLEDGERLLAWMLEKGIMPNTTTYNSLMKQYCIRNNMRCTTEI 347
Query: 399 YDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKT 458
Y M G+ P+ + ++ + K ++ A +KEM GF + N ++
Sbjct: 348 YKGMCARGVMPDSNTYNILIKGHCKARNMKEAWFLHKEMAEKGFNLTASSYNSIIKGFFK 407
Query: 459 ADERNEANELL 469
+ +EA EL
Sbjct: 408 KKKISEARELF 418
Score = 145 bits (366), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 101/367 (27%), Positives = 162/367 (44%), Gaps = 35/367 (9%)
Query: 122 MNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANK 181
M +G AP VVS++ ++ Y GG + + + MQ G +P+ TY I+ L ++ K
Sbjct: 1 MKFRGDAPDVVSYSTVINGYCLGGELQKVLKLIQEMQMKGLKPNLYTYNSIILLLCKSGK 60
Query: 182 FKEAEE---------------VFMTLLDE-----------------EKSPLKPDQKMFHM 209
+AE V+ TL+D EK + PD +
Sbjct: 61 VDDAERVLREMINQGIVPDTVVYTTLIDGFCKLGNIQAAYKLFDEMEKQRIVPDFIAYTA 120
Query: 210 MIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSK---IYDQMQRAG 266
+I + G +A K+F M RGV+ VTY +L+ E+ K +++QM ++G
Sbjct: 121 VICGLCRCGKMMEADKVFNKMFSRGVEPDEVTYTTLIDGYCKSGEMEKAFSLHNQMVQSG 180
Query: 267 LQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQAR 326
L P+VV+Y L + K + + A + EM G++ YN L++ SG + QA
Sbjct: 181 LTPNVVTYTALADGLCKLGQVDTANELLHEMCGKGLQLNICTYNSLVNGLCKSGNIRQAV 240
Query: 327 TVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGY 386
+ + M PD ++TT++ AY +M A + R + G P VIT+ L+ G+
Sbjct: 241 KLMEEMEVAGMYPDTITFTTLMDAYCKTGEMVKAHELLREMLDRGLQPTVITFNVLMNGF 300
Query: 387 AKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQ 446
LE + M GI PN T + ++M Y + YK M + G PD
Sbjct: 301 CMSGMLEDGERLLAWMLEKGIMPNTTTYNSLMKQYCIRNNMRCTTEIYKGMCARGVMPDS 360
Query: 447 KAKNILL 453
NIL+
Sbjct: 361 NTYNILI 367
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 91/373 (24%), Positives = 183/373 (49%), Gaps = 6/373 (1%)
Query: 99 FLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQ 158
+ LI + K G+ A K+ M K+ P +++TA++ R G+ A+ +F +M
Sbjct: 83 YTTLIDGFCKLGNIQAAYKLFDEMEKQRIVPDFIAYTAVICGLCRCGKMMEADKVFNKMF 142
Query: 159 SSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAG 218
S G P +TY ++ + ++ + ++A + ++ +S L P+ + + K G
Sbjct: 143 SRGVEPDEVTYTTLIDGYCKSGEMEKAFSLHNQMV---QSGLTPNVVTYTALADGLCKLG 199
Query: 219 GYEKARKLFALMAERGVQQSTVTYNSL---MSFETNYKEVSKIYDQMQRAGLQPDVVSYA 275
+ A +L M +G+Q + TYNSL + N ++ K+ ++M+ AG+ PD +++
Sbjct: 200 QVDTANELLHEMCGKGLQLNICTYNSLVNGLCKSGNIRQAVKLMEEMEVAGMYPDTITFT 259
Query: 276 LLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRD 335
L++AY K +A + EMLD G++PT +N+L++ F +SGM++ + M
Sbjct: 260 TLMDAYCKTGEMVKAHELLREMLDRGLQPTVITFNVLMNGFCMSGMLEDGERLLAWMLEK 319
Query: 336 RCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKM 395
P+ +Y +++ Y ++M + ++ + G +P+ TY LIKG+ K N+++
Sbjct: 320 GIMPNTTTYNSLMKQYCIRNNMRCTTEIYKGMCARGVMPDSNTYNILIKGHCKARNMKEA 379
Query: 396 MEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSL 455
++ +M G + + +I+ + K K A ++EM G D + N+ + +
Sbjct: 380 WFLHKEMAEKGFNLTASSYNSIIKGFFKKKKISEARELFEEMRREGMAADAEIYNLFVDI 439
Query: 456 AKTADERNEANEL 468
+ A EL
Sbjct: 440 SYGEGNMETALEL 452
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 74/271 (27%), Positives = 124/271 (45%), Gaps = 3/271 (1%)
Query: 202 PDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEV---SKI 258
PD + +I Y G +K KL M +G++ + TYNS++ +V ++
Sbjct: 8 PDVVSYSTVINGYCLGGELQKVLKLIQEMQMKGLKPNLYTYNSIILLLCKSGKVDDAERV 67
Query: 259 YDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAI 318
+M G+ PD V Y LI+ + K + A +F+EM + P AY ++
Sbjct: 68 LREMINQGIVPDTVVYTTLIDGFCKLGNIQAAYKLFDEMEKQRIVPDFIAYTAVICGLCR 127
Query: 319 SGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVIT 378
G + +A VF M PD +YTT++ Y + +ME A ++ Q G PNV+T
Sbjct: 128 CGKMMEADKVFNKMFSRGVEPDEVTYTTLIDGYCKSGEMEKAFSLHNQMVQSGLTPNVVT 187
Query: 379 YGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEME 438
Y L G K+ ++ E+ +M G++ N + ++++ K+ + AV +EME
Sbjct: 188 YTALADGLCKLGQVDTANELLHEMCGKGLQLNICTYNSLVNGLCKSGNIRQAVKLMEEME 247
Query: 439 SCGFPPDQKAKNILLSLAKTADERNEANELL 469
G PD L+ E +A+ELL
Sbjct: 248 VAGMYPDTITFTTLMDAYCKTGEMVKAHELL 278
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 103/208 (49%)
Query: 262 MQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGM 321
M+ G PDVVSY+ +IN Y ++ L + +EM G++P YN ++ SG
Sbjct: 1 MKFRGDAPDVVSYSTVINGYCLGGELQKVLKLIQEMQMKGLKPNLYTYNSIILLLCKSGK 60
Query: 322 VDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGT 381
VD A V + M PD YTT++ + +++ A K F +++ VP+ I Y
Sbjct: 61 VDDAERVLREMINQGIVPDTVVYTTLIDGFCKLGNIQAAYKLFDEMEKQRIVPDFIAYTA 120
Query: 382 LIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCG 441
+I G + + + ++++KM G++P++ +TT++D Y K+ + + A + +M G
Sbjct: 121 VICGLCRCGKMMEADKVFNKMFSRGVEPDEVTYTTLIDGYCKSGEMEKAFSLHNQMVQSG 180
Query: 442 FPPDQKAKNILLSLAKTADERNEANELL 469
P+ L + + ANELL
Sbjct: 181 LTPNVVTYTALADGLCKLGQVDTANELL 208
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 70/311 (22%), Positives = 138/311 (44%), Gaps = 8/311 (2%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
+E+ + LI Y K G+ KA + + M + G P+VV++TAL + + G+ A +
Sbjct: 149 DEVTYTTLIDGYCKSGEMEKAFSLHNQMVQSGLTPNVVTYTALADGLCKLGQVDTANELL 208
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDE-EKSPLKPDQKMFHMMIYM 213
M G + + TY ++ ++ ++A + L++E E + + PD F ++
Sbjct: 209 HEMCGKGLQLNICTYNSLVNGLCKSGNIRQA----VKLMEEMEVAGMYPDTITFTTLMDA 264
Query: 214 YKKAGGYEKARKLFALMAERGVQQSTVTYNSLM---SFETNYKEVSKIYDQMQRAGLQPD 270
Y K G KA +L M +RG+Q + +T+N LM ++ ++ M G+ P+
Sbjct: 265 YCKTGEMVKAHELLREMLDRGLQPTVITFNVLMNGFCMSGMLEDGERLLAWMLEKGIMPN 324
Query: 271 VVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFK 330
+Y L+ Y +++ M GV P YNIL+ + + +A + K
Sbjct: 325 TTTYNSLMKQYCIRNNMRCTTEIYKGMCARGVMPDSNTYNILIKGHCKARNMKEAWFLHK 384
Query: 331 CMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVN 390
M + SY +++ + + A + F ++++G + Y +
Sbjct: 385 EMAEKGFNLTASSYNSIIKGFFKKKKISEARELFEEMRREGMAADAEIYNLFVDISYGEG 444
Query: 391 NLEKMMEIYDK 401
N+E +E+ D+
Sbjct: 445 NMETALELCDE 455
>gi|255661200|gb|ACU25769.1| pentatricopeptide repeat-containing protein [Rhaphithamnus
venustus]
Length = 426
Score = 146 bits (369), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 91/378 (24%), Positives = 183/378 (48%), Gaps = 41/378 (10%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
LI K DF+KA + S + + G P +V++ +++ +G+ ++ A ++ M+ +G
Sbjct: 50 LIELSRKLCDFSKAISIFSRLKRSGITPDLVAYNSMINVFGKAKLFREARSLISEMRMAG 109
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTL---------------------LDEEKSP- 199
P ++Y +L ++VE KF EA VF + LD K
Sbjct: 110 IMPDTVSYSTLLTMYVENQKFLEALSVFAEMREIKCLLNLITCNVMIDVYGQLDMAKEAD 169
Query: 200 ----------LKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSF- 248
++P+ ++ ++ +Y A + +A LF LM + ++Q+ VTYN++M
Sbjct: 170 KLFWGMRKXGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNTMMMIY 229
Query: 249 --ETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTH 306
+++ + + +M G++PD ++Y+ +I+ +GK + + A +F+++ +GV
Sbjct: 230 GKTLEHEKANNLIQEMHNRGIEPDAITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQ 289
Query: 307 KAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRR 366
Y ++ A+ +G+V A+ + ++R PD T + A +E A FR+
Sbjct: 290 ILYQTMIVAYERAGLVAHAKRLLHELKR----PDNIPRDTAIHILAGAGRIEEATWVFRQ 345
Query: 367 LKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKD 426
G V ++ + +I ++K ++E+++KMR G P+ + +++AYGK ++
Sbjct: 346 AIDAGEVKDITVFERMINLFSKYKKYSNVVEVFEKMRGLGYFPDSNVIALVLNAYGKLRE 405
Query: 427 FDSAVVWYKEM--ESCGF 442
F+ A Y EM E C F
Sbjct: 406 FEKANDAYTEMQDEGCXF 423
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 83/319 (26%), Positives = 154/319 (48%), Gaps = 6/319 (1%)
Query: 164 PSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKA 223
P TY ++ F + F +A ++ +++++ P D ++ +I + +K + KA
Sbjct: 7 PDKYTYSTLITYFGKEGLFDDALS-WLQKMEQDRVP--GDLVLYSNLIELSRKLCDFSKA 63
Query: 224 RKLFALMAERGVQQSTVTYNSLMSF---ETNYKEVSKIYDQMQRAGLQPDVVSYALLINA 280
+F+ + G+ V YNS+++ ++E + +M+ AG+ PD VSY+ L+
Sbjct: 64 ISIFSRLKRSGITPDLVAYNSMINVFGKAKLFREARSLISEMRMAGIMPDTVSYSTLLTM 123
Query: 281 YGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPD 340
Y + ++ EAL+VF EM + N+++D + M +A +F MR+ P+
Sbjct: 124 YVENQKFLEALSVFAEMREIKCLLNLITCNVMIDVYGQLDMAKEADKLFWGMRKXGIEPN 183
Query: 341 ICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYD 400
+ SY T+L Y +A A FR +++ NV+TY T++ Y K EK +
Sbjct: 184 VVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNTMMMIYGKTLEHEKANNLIQ 243
Query: 401 KMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTAD 460
+M GI+P+ ++TI+ +GK D A + ++++ S G DQ ++ + A
Sbjct: 244 EMHNRGIEPDAITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQILYQTMIVAYERAG 303
Query: 461 ERNEANELLGNFNHPNNEP 479
A LL P+N P
Sbjct: 304 LVAHAKRLLHELKRPDNIP 322
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 70/300 (23%), Positives = 154/300 (51%), Gaps = 6/300 (2%)
Query: 125 KGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKE 184
+ +P +++ L+ +G+ G + +A + ++M+ + Y +++L + F +
Sbjct: 3 RALSPDKYTYSTLITYFGKEGLFDDALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDFSK 62
Query: 185 AEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNS 244
A +F L ++S + PD ++ MI ++ KA + +AR L + M G+ TV+Y++
Sbjct: 63 AISIFSRL---KRSGITPDLVAYNSMINVFGKAKLFREARSLISEMRMAGIMPDTVSYST 119
Query: 245 LMSFET---NYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAG 301
L++ + E ++ +M+ ++++ ++I+ YG+ +EA +F M G
Sbjct: 120 LLTMYVENQKFLEALSVFAEMREIKCLLNLITCNVMIDVYGQLDMAKEADKLFWGMRKXG 179
Query: 302 VRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAE 361
+ P +YN LL + + + +A +F+ M+R ++ +Y TM+ Y + E A
Sbjct: 180 IEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNTMMMIYGKTLEHEKAN 239
Query: 362 KFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAY 421
+ + G P+ ITY T+I + KV L++ ++ K+R +G++ +Q ++ T++ AY
Sbjct: 240 NLIQEMHNRGIEPDAITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQILYQTMIVAY 299
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 58/250 (23%), Positives = 121/250 (48%), Gaps = 3/250 (1%)
Query: 233 RGVQQSTVTYNSLMSF---ETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEE 289
R + TY++L+++ E + + +M++ + D+V Y+ LI K +
Sbjct: 3 RALSPDKYTYSTLITYFGKEGLFDDALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDFSK 62
Query: 290 ALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLS 349
A+++F + +G+ P AYN +++ F + + +AR++ MR PD SY+T+L+
Sbjct: 63 AISIFSRLKRSGITPDLVAYNSMINVFGKAKLFREARSLISEMRMAGIMPDTVSYSTLLT 122
Query: 350 AYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKP 409
YV A F +++ + N+IT +I Y +++ ++ +++ MR GI+P
Sbjct: 123 MYVENQKFLEALSVFAEMREIKCLLNLITCNVMIDVYGQLDMAKEADKLFWGMRKXGIEP 182
Query: 410 NQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELL 469
N + T++ YG + F A+ ++ M+ + N ++ + E +AN L+
Sbjct: 183 NVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNTMMMIYGKTLEHEKANNLI 242
Query: 470 GNFNHPNNEP 479
++ EP
Sbjct: 243 QEMHNRGIEP 252
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/244 (22%), Positives = 113/244 (46%), Gaps = 6/244 (2%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + + L+ YG F +A + M +K +VV++ +M YG+ ++ A +
Sbjct: 183 NVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNTMMMIYGKTLEHEKANNLI 242
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
+ M + G P A+TY I+ ++ + K A +F L S ++ DQ ++ MI Y
Sbjct: 243 QEMHNRGIEPDAITYSTIISIWGKVGKLDRAAMLFQKL---RSSGVEIDQILYQTMIVAY 299
Query: 215 KKAGGYEKARKLFA-LMAERGVQQSTVTYNSLMSFETNYKEVSKIYDQMQRAGLQPDVVS 273
++AG A++L L + + T + +++ +E + ++ Q AG D+
Sbjct: 300 ERAGLVAHAKRLLHELKRPDNIPRDTAIH--ILAGAGRIEEATWVFRQAIDAGEVKDITV 357
Query: 274 YALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMR 333
+ +IN + K ++ + VFE+M G P ++L+A+ ++A + M+
Sbjct: 358 FERMINLFSKYKKYSNVVEVFEKMRGLGYFPDSNVIALVLNAYGKLREFEKANDAYTEMQ 417
Query: 334 RDRC 337
+ C
Sbjct: 418 DEGC 421
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 66/309 (21%), Positives = 128/309 (41%), Gaps = 45/309 (14%)
Query: 101 MLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSS 160
++I YG+ +A+K+ M K G P+VVS+ L+ YG + A +FR MQ
Sbjct: 154 VMIDVYGQLDMAKEADKLFWGMRKXGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRK 213
Query: 161 GPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGY 220
+ +TY + M+ +Y K +
Sbjct: 214 NIEQNVVTY--------------------------------------NTMMMIYGKTLEH 235
Query: 221 EKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSK---IYDQMQRAGLQPDVVSYALL 277
EKA L M RG++ +TY++++S ++ + ++ +++ +G++ D + Y +
Sbjct: 236 EKANNLIQEMHNRGIEPDAITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQILYQTM 295
Query: 278 INAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRC 337
I AY +A A + E+ P A +IL A +G +++A VF+
Sbjct: 296 IVAYERAGLVAHAKRLLHELKRPDNIPRDTAIHIL----AGAGRIEEATWVFRQAIDAGE 351
Query: 338 SPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMME 397
DI + M++ + + F +++ G+ P+ ++ Y K+ EK +
Sbjct: 352 VKDITVFERMINLFSKYKKYSNVVEVFEKMRGLGYFPDSNVIALVLNAYGKLREFEKAND 411
Query: 398 IYDKMRVNG 406
Y +M+ G
Sbjct: 412 AYTEMQDEG 420
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/216 (22%), Positives = 93/216 (43%)
Query: 266 GLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQA 325
L PD +Y+ LI +GK ++AL+ ++M V Y+ L++ +A
Sbjct: 4 ALSPDKYTYSTLITYFGKEGLFDDALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDFSKA 63
Query: 326 RTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKG 385
++F ++R +PD+ +Y +M++ + A A ++ G +P+ ++Y TL+
Sbjct: 64 ISIFSRLKRSGITPDLVAYNSMINVFGKAKLFREARSLISEMRMAGIMPDTVSYSTLLTM 123
Query: 386 YAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPD 445
Y + + + ++ +MR N ++D YG+ A + M G P+
Sbjct: 124 YVENQKFLEALSVFAEMREIKCLLNLITCNVMIDVYGQLDMAKEADKLFWGMRKXGIEPN 183
Query: 446 QKAKNILLSLAKTADERNEANELLGNFNHPNNEPGI 481
+ N LL + A+ EA L N E +
Sbjct: 184 VVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNV 219
>gi|125537564|gb|EAY84052.1| hypothetical protein OsI_39281 [Oryza sativa Indica Group]
Length = 762
Score = 146 bits (369), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 87/317 (27%), Positives = 154/317 (48%), Gaps = 7/317 (2%)
Query: 70 LKQLKKWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAP 129
LK L + +WL+ Q + + + +I G+ F K+L MN P
Sbjct: 340 LKLLHDHTIALGFFQWLKRQPGFKHDGHSYTTMIGILGQARQFGTMRKLLDEMNSVHCKP 399
Query: 130 SVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVF 189
+VV++ ++ AYGR + A +F MQ +G P +TY ++ + + + A +++
Sbjct: 400 TVVTYNRIIHAYGRANYLREAVKVFEEMQKAGYEPDRVTYCTLIDIHAKGGYLEVAMDLY 459
Query: 190 MTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFE 249
+ ++ L PD + M+ K G A KLF M E G + VTYN +++ +
Sbjct: 460 TRM---QEVGLSPDTFTYSAMVNCLGKGGHLAAAYKLFCEMVENGCTPNLVTYNIMIALQ 516
Query: 250 T---NYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTH 306
NY+ V K+Y MQ AG +PD ++Y++++ G +EA AVF EM P
Sbjct: 517 AKARNYENVVKLYKDMQVAGFRPDKITYSIVMEVLGHCGHLDEAEAVFIEMRHDWA-PDE 575
Query: 307 KAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRR 366
Y +L+D + +G VD+A + M +D P++ + ++LSA++ + + A +
Sbjct: 576 PVYGLLVDLWGKAGNVDKALGWYHAMLQDGLQPNVPTCNSLLSAFLKINRFQDAYSVLQN 635
Query: 367 LKQDGFVPNVITYGTLI 383
+ G VP++ TY L+
Sbjct: 636 MLAQGLVPSLQTYTLLL 652
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 75/291 (25%), Positives = 147/291 (50%), Gaps = 7/291 (2%)
Query: 133 SHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTL 192
S+T ++ G+ ++ + M S +P+ +TY I+ + AN +EA +VF +
Sbjct: 368 SYTTMIGILGQARQFGTMRKLLDEMNSVHCKPTVVTYNRIIHAYGRANYLREAVKVFEEM 427
Query: 193 LDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNY 252
+K+ +PD+ + +I ++ K G E A L+ M E G+ T TY+++++
Sbjct: 428 ---QKAGYEPDRVTYCTLIDIHAKGGYLEVAMDLYTRMQEVGLSPDTFTYSAMVNCLGKG 484
Query: 253 KEVS---KIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAY 309
++ K++ +M G P++V+Y ++I KAR E + ++++M AG RP Y
Sbjct: 485 GHLAAAYKLFCEMVENGCTPNLVTYNIMIALQAKARNYENVVKLYKDMQVAGFRPDKITY 544
Query: 310 NILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQ 369
+I+++ G +D+A VF MR D +PD Y ++ + A +++ A ++ + Q
Sbjct: 545 SIVMEVLGHCGHLDEAEAVFIEMRHDW-APDEPVYGLLVDLWGKAGNVDKALGWYHAMLQ 603
Query: 370 DGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDA 420
DG PNV T +L+ + K+N + + M G+ P+ +T ++
Sbjct: 604 DGLQPNVPTCNSLLSAFLKINRFQDAYSVLQNMLAQGLVPSLQTYTLLLSC 654
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 66/229 (28%), Positives = 114/229 (49%), Gaps = 1/229 (0%)
Query: 237 QSTVTYNSLMSFETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEE 296
S T ++ + + K+ D+M +P VV+Y +I+AYG+A EA+ VFEE
Sbjct: 367 HSYTTMIGILGQARQFGTMRKLLDEMNSVHCKPTVVTYNRIIHAYGRANYLREAVKVFEE 426
Query: 297 MLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASD 356
M AG P Y L+D A G ++ A ++ M+ SPD +Y+ M++
Sbjct: 427 MQKAGYEPDRVTYCTLIDIHAKGGYLEVAMDLYTRMQEVGLSPDTFTYSAMVNCLGKGGH 486
Query: 357 MEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTT 416
+ A K F + ++G PN++TY +I AK N E ++++Y M+V G +P++ ++
Sbjct: 487 LAAAYKLFCEMVENGCTPNLVTYNIMIALQAKARNYENVVKLYKDMQVAGFRPDKITYSI 546
Query: 417 IMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEA 465
+M+ G D A + EM + PD+ +L+ L A ++A
Sbjct: 547 VMEVLGHCGHLDEAEAVFIEMRH-DWAPDEPVYGLLVDLWGKAGNVDKA 594
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 81/313 (25%), Positives = 146/313 (46%), Gaps = 10/313 (3%)
Query: 168 TYQIILKLFVEANKFKEAEEVFMTLLDEEKS-PLKPDQKMFHMMIYMYKKAGGYEKARKL 226
+Y ++ + +A +F + LLDE S KP ++ +I+ Y +A +A K+
Sbjct: 368 SYTTMIGILGQARQFGTMRK----LLDEMNSVHCKPTVVTYNRIIHAYGRANYLREAVKV 423
Query: 227 FALMAERGVQQSTVTYNSLMSFET--NYKEVS-KIYDQMQRAGLQPDVVSYALLINAYGK 283
F M + G + VTY +L+ Y EV+ +Y +MQ GL PD +Y+ ++N GK
Sbjct: 424 FEEMQKAGYEPDRVTYCTLIDIHAKGGYLEVAMDLYTRMQEVGLSPDTFTYSAMVNCLGK 483
Query: 284 ARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICS 343
A +F EM++ G P YNI++ A + + ++K M+ PD +
Sbjct: 484 GGHLAAAYKLFCEMVENGCTPNLVTYNIMIALQAKARNYENVVKLYKDMQVAGFRPDKIT 543
Query: 344 YTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMR 403
Y+ ++ + ++ AE F ++ D + P+ YG L+ + K N++K + Y M
Sbjct: 544 YSIVMEVLGHCGHLDEAEAVFIEMRHD-WAPDEPVYGLLVDLWGKAGNVDKALGWYHAML 602
Query: 404 VNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTAD-ER 462
+G++PN +++ A+ K F A + M + G P + +LLS A +
Sbjct: 603 QDGLQPNVPTCNSLLSAFLKINRFQDAYSVLQNMLAQGLVPSLQTYTLLLSCCTEAQAQM 662
Query: 463 NEANELLGNFNHP 475
+L+ HP
Sbjct: 663 GLCCQLMAITGHP 675
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 50/212 (23%), Positives = 102/212 (48%)
Query: 263 QRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMV 322
++ G + D SY +I G+AR+ + +EM +PT YN ++ A+ + +
Sbjct: 358 RQPGFKHDGHSYTTMIGILGQARQFGTMRKLLDEMNSVHCKPTVVTYNRIIHAYGRANYL 417
Query: 323 DQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTL 382
+A VF+ M++ PD +Y T++ + +E A + R+++ G P+ TY +
Sbjct: 418 REAVKVFEEMQKAGYEPDRVTYCTLIDIHAKGGYLEVAMDLYTRMQEVGLSPDTFTYSAM 477
Query: 383 IKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGF 442
+ K +L +++ +M NG PN + ++ K +++++ V YK+M+ GF
Sbjct: 478 VNCLGKGGHLAAAYKLFCEMVENGCTPNLVTYNIMIALQAKARNYENVVKLYKDMQVAGF 537
Query: 443 PPDQKAKNILLSLAKTADERNEANELLGNFNH 474
PD+ +I++ + +EA + H
Sbjct: 538 RPDKITYSIVMEVLGHCGHLDEAEAVFIEMRH 569
Score = 47.4 bits (111), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 48/88 (54%)
Query: 92 WDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAE 151
W +E + +L+ +GK G+ +KA M + G P+V + +L+ A+ + R+++A
Sbjct: 571 WAPDEPVYGLLVDLWGKAGNVDKALGWYHAMLQDGLQPNVPTCNSLLSAFLKINRFQDAY 630
Query: 152 AIFRRMQSSGPRPSALTYQIILKLFVEA 179
++ + M + G PS TY ++L EA
Sbjct: 631 SVLQNMLAQGLVPSLQTYTLLLSCCTEA 658
>gi|356522596|ref|XP_003529932.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
mitochondrial-like [Glycine max]
Length = 827
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 85/356 (23%), Positives = 174/356 (48%), Gaps = 7/356 (1%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
LI Y +GD N A ++ + + G P+V + L+E + G + A ++ RM+ G
Sbjct: 333 LIKGYCVRGDVNSALRLFDEVVEVGVTPNVAIFSVLIEWCSKIGNVEKANELYTRMKCMG 392
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
+P+ +LK F + N + A LLD +++++ + G
Sbjct: 393 LQPTVFILNFLLKGFRKQNLLENA----YLLLDGAVENGIASVVTYNIVLLWLCELGKVN 448
Query: 222 KARKLFALMAERGVQQSTVTYNSLMSFETN---YKEVSKIYDQMQRAGLQPDVVSYALLI 278
+A L+ M +G+ S V+YN ++ + ++ + + +GL+P+ ++Y +L+
Sbjct: 449 EACNLWDKMIGKGITPSLVSYNHMILGHCKKGCMDDAHEVMNGIIESGLKPNAITYTILM 508
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCS 338
K E A +F++M+ AG+ PT +N +++ G V +AR +
Sbjct: 509 EGSFKKGDCEHAFNMFDQMVAAGIVPTDYTFNSIINGLCKVGRVSEARDKLNTFIKQSFI 568
Query: 339 PDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEI 398
P +Y ++ YV ++ AE +R + + PNVITY +LI G+ K N ++ +++
Sbjct: 569 PTSMTYNCIIDGYVKEGAIDSAESVYREMCRSEISPNVITYTSLINGFCKSNKMDLALKM 628
Query: 399 YDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLS 454
+D M+ G++ + T++ T++ + K +D ++A ++ ++ G P+ NI++S
Sbjct: 629 HDDMKRKGLELDITVYATLIAGFCKMQDMENACKFFSKLLEVGLTPNTIVYNIMIS 684
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 88/356 (24%), Positives = 172/356 (48%), Gaps = 6/356 (1%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
+I + K+G + A +V++ + + G P+ +++T LME + G ++A +F +M ++G
Sbjct: 472 MILGHCKKGCMDDAHEVMNGIIESGLKPNAITYTILMEGSFKKGDCEHAFNMFDQMVAAG 531
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
P+ T+ I+ + + EA + T + K P ++ +I Y K G +
Sbjct: 532 IVPTDYTFNSIINGLCKVGRVSEARDKLNTFI---KQSFIPTSMTYNCIIDGYVKEGAID 588
Query: 222 KARKLFALMAERGVQQSTVTYNSLMS--FETNYKEVS-KIYDQMQRAGLQPDVVSYALLI 278
A ++ M + + +TY SL++ ++N +++ K++D M+R GL+ D+ YA LI
Sbjct: 589 SAESVYREMCRSEISPNVITYTSLINGFCKSNKMDLALKMHDDMKRKGLELDITVYATLI 648
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCS 338
+ K + E A F ++L+ G+ P YNI++ A+ ++ A + K M ++
Sbjct: 649 AGFCKMQDMENACKFFSKLLEVGLTPNTIVYNIMISAYRNLNNMEAALNLHKEMINNKIP 708
Query: 339 PDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEI 398
D+ YT+++ + + A + + G VP++ Y LI G LE +I
Sbjct: 709 CDLKIYTSLIDGLLKEGKLSFALDLYSEMLCRGIVPDIFMYNVLINGLCNHGQLENAGKI 768
Query: 399 YDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLS 454
+M N I P ++ T++ + K + A + EM G PD +IL++
Sbjct: 769 LKEMDGNNITPTVLLYNTLIAGHFKEGNLQEAFRLHDEMLDKGLVPDDTTYDILVN 824
Score = 105 bits (261), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 69/290 (23%), Positives = 140/290 (48%), Gaps = 6/290 (2%)
Query: 99 FLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQ 158
F +I K G ++A L+ K+ + P+ +++ +++ Y + G +AE+++R M
Sbjct: 539 FNSIINGLCKVGRVSEARDKLNTFIKQSFIPTSMTYNCIIDGYVKEGAIDSAESVYREMC 598
Query: 159 SSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAG 218
S P+ +TY ++ F ++NK A ++ D ++ L+ D ++ +I + K
Sbjct: 599 RSEISPNVITYTSLINGFCKSNKMDLALKMHD---DMKRKGLELDITVYATLIAGFCKMQ 655
Query: 219 GYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVS---KIYDQMQRAGLQPDVVSYA 275
E A K F+ + E G+ +T+ YN ++S N + ++ +M + D+ Y
Sbjct: 656 DMENACKFFSKLLEVGLTPNTIVYNIMISAYRNLNNMEAALNLHKEMINNKIPCDLKIYT 715
Query: 276 LLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRD 335
LI+ K + AL ++ EML G+ P YN+L++ G ++ A + K M +
Sbjct: 716 SLIDGLLKEGKLSFALDLYSEMLCRGIVPDIFMYNVLINGLCNHGQLENAGKILKEMDGN 775
Query: 336 RCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKG 385
+P + Y T+++ + +++ A + + G VP+ TY L+ G
Sbjct: 776 NITPTVLLYNTLIAGHFKEGNLQEAFRLHDEMLDKGLVPDDTTYDILVNG 825
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 65/266 (24%), Positives = 118/266 (44%), Gaps = 6/266 (2%)
Query: 168 TYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLF 227
+ +L +V ANK EA E F +L++ P P ++++ + E A +LF
Sbjct: 154 VFNYLLISYVRANKITEAVECFRAMLEDGVVPWVP---FVNVLLTAMIRRNMVEDAHRLF 210
Query: 228 ALMAERGVQQSTVTYNSLMSFETN---YKEVSKIYDQMQRAGLQPDVVSYALLINAYGKA 284
MAER + T LM + E + + Q GL+ D SY+++I A +
Sbjct: 211 DEMAERRIYGDCYTLQVLMRACLKGGKFVEAERYFGQAAGRGLKLDAASYSIVIQAVCRG 270
Query: 285 RREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSY 344
+ A + E + G P+ Y ++ A G +A + M R ++
Sbjct: 271 SDLDLASKLVEGDEELGWVPSEGTYAAVIGACVRLGNFGEALRLKDEMVDSRVPVNVAVA 330
Query: 345 TTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRV 404
T+++ Y D+ A + F + + G PNV + LI+ +K+ N+EK E+Y +M+
Sbjct: 331 TSLIKGYCVRGDVNSALRLFDEVVEVGVTPNVAIFSVLIEWCSKIGNVEKANELYTRMKC 390
Query: 405 NGIKPNQTIFTTIMDAYGKNKDFDSA 430
G++P I ++ + K ++A
Sbjct: 391 MGLQPTVFILNFLLKGFRKQNLLENA 416
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 82/411 (19%), Positives = 161/411 (39%), Gaps = 40/411 (9%)
Query: 99 FLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQ 158
F L+ +Y + +A + M + G P V L+ A R ++A +F M
Sbjct: 155 FNYLLISYVRANKITEAVECFRAMLEDGVVPWVPFVNVLLTAMIRRNMVEDAHRLFDEMA 214
Query: 159 SSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAG 218
T Q++++ ++ KF EAE F LK D + ++I +
Sbjct: 215 ERRIYGDCYTLQVLMRACLKGGKFVEAERYFG---QAAGRGLKLDAASYSIVIQAVCRGS 271
Query: 219 GYEKARKLFALMAERGVQQSTVTYNSLMSFET---NYKEVSKIYDQMQRAGLQPDVVSYA 275
+ A KL E G S TY +++ N+ E ++ D+M + + +V
Sbjct: 272 DLDLASKLVEGDEELGWVPSEGTYAAVIGACVRLGNFGEALRLKDEMVDSRVPVNVAVAT 331
Query: 276 LLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRD 335
LI Y AL +F+E+++ GV P +++L++ + G V++A ++ M+
Sbjct: 332 SLIKGYCVRGDVNSALRLFDEVVEVGVTPNVAIFSVLIEWCSKIGNVEKANELYTRMKCM 391
Query: 336 RCSP----------------------------------DICSYTTMLSAYVNASDMEGAE 361
P + +Y +L + A
Sbjct: 392 GLQPTVFILNFLLKGFRKQNLLENAYLLLDGAVENGIASVVTYNIVLLWLCELGKVNEAC 451
Query: 362 KFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAY 421
+ ++ G P++++Y +I G+ K ++ E+ + + +G+KPN +T +M+
Sbjct: 452 NLWDKMIGKGITPSLVSYNHMILGHCKKGCMDDAHEVMNGIIESGLKPNAITYTILMEGS 511
Query: 422 GKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNF 472
K D + A + +M + G P N +++ +EA + L F
Sbjct: 512 FKKGDCEHAFNMFDQMVAAGIVPTDYTFNSIINGLCKVGRVSEARDKLNTF 562
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/224 (23%), Positives = 101/224 (45%), Gaps = 6/224 (2%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + + LI + K + A K+ M +KG + + L+ + + +NA F
Sbjct: 605 NVITYTSLINGFCKSNKMDLALKMHDDMKRKGLELDITVYATLIAGFCKMQDMENACKFF 664
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
++ G P+ + Y I++ + N + A + +++ + + D K++ +I
Sbjct: 665 SKLLEVGLTPNTIVYNIMISAYRNLNNMEAALNLHKEMINNK---IPCDLKIYTSLIDGL 721
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEV---SKIYDQMQRAGLQPDV 271
K G A L++ M RG+ YN L++ N+ ++ KI +M + P V
Sbjct: 722 LKEGKLSFALDLYSEMLCRGIVPDIFMYNVLINGLCNHGQLENAGKILKEMDGNNITPTV 781
Query: 272 VSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDA 315
+ Y LI + K +EA + +EMLD G+ P Y+IL++
Sbjct: 782 LLYNTLIAGHFKEGNLQEAFRLHDEMLDKGLVPDDTTYDILVNG 825
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 68/298 (22%), Positives = 125/298 (41%), Gaps = 10/298 (3%)
Query: 58 LPKDLVLGTLVRLKQLKKWNVVSEVLEWLR--IQSWWDFNEMDFLMLITAYGKQGDFNKA 115
+P D +++ L K VSE + L I+ + M + +I Y K+G + A
Sbjct: 533 VPTDYTFNSII--NGLCKVGRVSEARDKLNTFIKQSFIPTSMTYNCIIDGYVKEGAIDSA 590
Query: 116 EKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKL 175
E V M + +P+V+++T+L+ + + + A + M+ G Y ++
Sbjct: 591 ESVYREMCRSEISPNVITYTSLINGFCKSNKMDLALKMHDDMKRKGLELDITVYATLIAG 650
Query: 176 FVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGV 235
F + + A + F LL+ L P+ ++++MI Y+ E A L M +
Sbjct: 651 FCKMQDMENACKFFSKLLE---VGLTPNTIVYNIMISAYRNLNNMEAALNLHKEMINNKI 707
Query: 236 QQSTVTYNSLMSFETNYKEVS---KIYDQMQRAGLQPDVVSYALLINAYGKARREEEALA 292
Y SL+ ++S +Y +M G+ PD+ Y +LIN + E A
Sbjct: 708 PCDLKIYTSLIDGLLKEGKLSFALDLYSEMLCRGIVPDIFMYNVLINGLCNHGQLENAGK 767
Query: 293 VFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSA 350
+ +EM + PT YN L+ G + +A + M PD +Y +++
Sbjct: 768 ILKEMDGNNITPTVLLYNTLIAGHFKEGNLQEAFRLHDEMLDKGLVPDDTTYDILVNG 825
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 77/322 (23%), Positives = 137/322 (42%), Gaps = 16/322 (4%)
Query: 143 RGGRYKNAEAIFRRMQSSGPRPSALT-YQIILKLFVEANKFKEAEEVFMTLLDE--EKSP 199
+GG K A+ + +Q P + +L +V + A +V + LL E E+
Sbjct: 88 KGGFAKTADVLCLLLQILASNPETHGDAKHLLNKYVFGDS-APAAKVLVELLVECAERYG 146
Query: 200 LK-PDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMS--FETNYKE-V 255
K D ++F+ ++ Y +A +A + F M E GV N L++ N E
Sbjct: 147 FKLSDSRVFNYLLISYVRANKITEAVECFRAMLEDGVVPWVPFVNVLLTAMIRRNMVEDA 206
Query: 256 SKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDA 315
+++D+M + D + +L+ A K + EA F + G++ +Y+I++ A
Sbjct: 207 HRLFDEMAERRIYGDCYTLQVLMRACLKGGKFVEAERYFGQAAGRGLKLDAASYSIVIQA 266
Query: 316 FAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQ---DGF 372
+D A + + P +Y ++ A V + A RLK D
Sbjct: 267 VCRGSDLDLASKLVEGDEELGWVPSEGTYAAVIGACVRLGNFGEA----LRLKDEMVDSR 322
Query: 373 VP-NVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAV 431
VP NV +LIKGY ++ + ++D++ G+ PN IF+ +++ K + + A
Sbjct: 323 VPVNVAVATSLIKGYCVRGDVNSALRLFDEVVEVGVTPNVAIFSVLIEWCSKIGNVEKAN 382
Query: 432 VWYKEMESCGFPPDQKAKNILL 453
Y M+ G P N LL
Sbjct: 383 ELYTRMKCMGLQPTVFILNFLL 404
>gi|356508608|ref|XP_003523047.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g18900-like [Glycine max]
Length = 879
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 92/340 (27%), Positives = 164/340 (48%), Gaps = 6/340 (1%)
Query: 70 LKQLKKWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAP 129
LKQL+ +V WL+ Q + + + ++ G+ +F K+L M K G P
Sbjct: 357 LKQLQDHSVAVGFFCWLKRQPGFWHDGHTYTTMVGILGRAREFGAINKLLEQMVKDGCQP 416
Query: 130 SVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVF 189
+VV++ L+ +YGR + A +F +MQ G P +TY ++ + +A A ++
Sbjct: 417 NVVTYNRLIHSYGRANYLREALNVFNQMQEMGCEPDRVTYCTLIDIHAKAGFLDVAMSMY 476
Query: 190 MTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFE 249
+ ++ L PD + +MI K+G A +LF M ++G + VTYN L++ +
Sbjct: 477 ERM---QEVGLSPDTFTYSVMINCLGKSGNLSAAHRLFCEMVDQGCVPNIVTYNILIALQ 533
Query: 250 T---NYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTH 306
NY+ ++Y MQ AG +PD V+Y++++ G EEA AVF EM P
Sbjct: 534 AKARNYQTALELYRDMQNAGFKPDKVTYSIVMEVLGHCGYLEEAEAVFFEMRQNHWVPDE 593
Query: 307 KAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRR 366
Y +L+D + +G V++A + M R P++ + ++LSA++ + A +
Sbjct: 594 PVYGLLVDLWGKAGNVEKAWEWYHTMLRAGLLPNVPTCNSLLSAFLRVHRLPDAYNLLQN 653
Query: 367 LKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNG 406
+ G P++ TY L+ + + M + M V+G
Sbjct: 654 MVTLGLNPSLQTYTLLLSCCTEAQSPYDMGFCCELMAVSG 693
Score = 128 bits (322), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 74/273 (27%), Positives = 135/273 (49%), Gaps = 3/273 (1%)
Query: 203 DQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSF--ETNY-KEVSKIY 259
D + M+ + +A + KL M + G Q + VTYN L+ NY +E ++
Sbjct: 382 DGHTYTTMVGILGRAREFGAINKLLEQMVKDGCQPNVVTYNRLIHSYGRANYLREALNVF 441
Query: 260 DQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAIS 319
+QMQ G +PD V+Y LI+ + KA + A++++E M + G+ P Y+++++ S
Sbjct: 442 NQMQEMGCEPDRVTYCTLIDIHAKAGFLDVAMSMYERMQEVGLSPDTFTYSVMINCLGKS 501
Query: 320 GMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITY 379
G + A +F M C P+I +Y +++ A + + A + +R ++ GF P+ +TY
Sbjct: 502 GNLSAAHRLFCEMVDQGCVPNIVTYNILIALQAKARNYQTALELYRDMQNAGFKPDKVTY 561
Query: 380 GTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMES 439
+++ LE+ ++ +MR N P++ ++ ++D +GK + + A WY M
Sbjct: 562 SIVMEVLGHCGYLEEAEAVFFEMRQNHWVPDEPVYGLLVDLWGKAGNVEKAWEWYHTMLR 621
Query: 440 CGFPPDQKAKNILLSLAKTADERNEANELLGNF 472
G P+ N LLS +A LL N
Sbjct: 622 AGLLPNVPTCNSLLSAFLRVHRLPDAYNLLQNM 654
Score = 121 bits (304), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 81/314 (25%), Positives = 147/314 (46%), Gaps = 9/314 (2%)
Query: 168 TYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLF 227
TY ++ + A +F ++ ++ K +P+ ++ +I+ Y +A +A +F
Sbjct: 385 TYTTMVGILGRAREFGAINKLLEQMV---KDGCQPNVVTYNRLIHSYGRANYLREALNVF 441
Query: 228 ALMAERGVQQSTVTYNSLMSF--ETNYKEVS-KIYDQMQRAGLQPDVVSYALLINAYGKA 284
M E G + VTY +L+ + + +V+ +Y++MQ GL PD +Y+++IN GK+
Sbjct: 442 NQMQEMGCEPDRVTYCTLIDIHAKAGFLDVAMSMYERMQEVGLSPDTFTYSVMINCLGKS 501
Query: 285 RREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSY 344
A +F EM+D G P YNIL+ A + A +++ M+ PD +Y
Sbjct: 502 GNLSAAHRLFCEMVDQGCVPNIVTYNILIALQAKARNYQTALELYRDMQNAGFKPDKVTY 561
Query: 345 TTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRV 404
+ ++ + +E AE F ++Q+ +VP+ YG L+ + K N+EK E Y M
Sbjct: 562 SIVMEVLGHCGYLEEAEAVFFEMRQNHWVPDEPVYGLLVDLWGKAGNVEKAWEWYHTMLR 621
Query: 405 NGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNE 464
G+ PN +++ A+ + A + M + G P + +LLS A +
Sbjct: 622 AGLLPNVPTCNSLLSAFLRVHRLPDAYNLLQNMVTLGLNPSLQTYTLLLSCCTEAQSPYD 681
Query: 465 ---ANELLGNFNHP 475
EL+ HP
Sbjct: 682 MGFCCELMAVSGHP 695
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 46/193 (23%), Positives = 95/193 (49%)
Query: 263 QRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMV 322
++ G D +Y ++ G+AR + E+M+ G +P YN L+ ++ + +
Sbjct: 375 RQPGFWHDGHTYTTMVGILGRAREFGAINKLLEQMVKDGCQPNVVTYNRLIHSYGRANYL 434
Query: 323 DQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTL 382
+A VF M+ C PD +Y T++ + A ++ A + R+++ G P+ TY +
Sbjct: 435 REALNVFNQMQEMGCEPDRVTYCTLIDIHAKAGFLDVAMSMYERMQEVGLSPDTFTYSVM 494
Query: 383 IKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGF 442
I K NL ++ +M G PN + ++ K +++ +A+ Y++M++ GF
Sbjct: 495 INCLGKSGNLSAAHRLFCEMVDQGCVPNIVTYNILIALQAKARNYQTALELYRDMQNAGF 554
Query: 443 PPDQKAKNILLSL 455
PD+ +I++ +
Sbjct: 555 KPDKVTYSIVMEV 567
>gi|125582553|gb|EAZ23484.1| hypothetical protein OsJ_07180 [Oryza sativa Japonica Group]
Length = 457
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 95/371 (25%), Positives = 175/371 (47%), Gaps = 6/371 (1%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
LI +G A VL M ++ P VV++T L+EA + YK A + M+ G
Sbjct: 38 LIRGLCGRGRTANALAVLDEMLRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKG 97
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
P +TY +++ + + +A E L +P+ +++++ A +E
Sbjct: 98 CTPDIVTYNVVVNGICQEGRVDDAIEFLKNL---PSYGCEPNTVSYNIVLKGLCTAERWE 154
Query: 222 KARKLFALMAERGVQQSTVTYNSLMSFETNYKEVS---KIYDQMQRAGLQPDVVSYALLI 278
A +L M ++G + VT+N L+SF V ++ +Q+ + G P+ +SY L+
Sbjct: 155 DAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLL 214
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCS 338
+A+ K ++ ++A+A + M+ G P +YN LL A SG VD A + ++ C+
Sbjct: 215 HAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCA 274
Query: 339 PDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEI 398
P + SY T++ A + A + + G P++ITY T+ G + + +E +
Sbjct: 275 PVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRA 334
Query: 399 YDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKT 458
+ K++ GI+PN ++ I+ K ++ SA+ + M G P++ IL+
Sbjct: 335 FGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTILIEGLAY 394
Query: 459 ADERNEANELL 469
EA +LL
Sbjct: 395 EGLIKEARDLL 405
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 89/360 (24%), Positives = 175/360 (48%), Gaps = 10/360 (2%)
Query: 66 TLVR--LKQLKKWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMN 123
TL+R + + N ++ + E LR + D + + +L+ A K+ + +A K+L M
Sbjct: 37 TLIRGLCGRGRTANALAVLDEMLRRRCVPDV--VTYTILLEATCKRSGYKQAMKLLDEMR 94
Query: 124 KKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFK 183
KG P +V++ ++ + GR +A + + S G P+ ++Y I+LK A +++
Sbjct: 95 DKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWE 154
Query: 184 EAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYN 243
+AEE M + ++ P P+ F+M+I + G E A ++ + + G ++++YN
Sbjct: 155 DAEE-LMGEMGQKGCP--PNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYN 211
Query: 244 SLMSFETNYKEVSK---IYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDA 300
L+ K++ K D M G PD+VSY L+ A ++ + A+ + ++ D
Sbjct: 212 PLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDK 271
Query: 301 GVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGA 360
G P +YN ++D +G +A + M PDI +Y+T+ + +E A
Sbjct: 272 GCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDA 331
Query: 361 EKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDA 420
+ F +++ G PN + Y +I G K ++++ M NG PN++ +T +++
Sbjct: 332 IRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTILIEG 391
Score = 138 bits (347), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 95/388 (24%), Positives = 184/388 (47%), Gaps = 15/388 (3%)
Query: 97 MDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRR 156
M + ++ Y G + A ++++ M + P ++ L+ GR NA A+
Sbjct: 1 MAYNAMVAGYCGAGQLDAARRLVAEMPVE---PDAYTYNTLIRGLCGRGRTANALAVLDE 57
Query: 157 MQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSP-LKPDQKMFHMMIYMYK 215
M P +TY I+L+ + + +K+A M LLDE + PD +++++
Sbjct: 58 MLRRRCVPDVVTYTILLEATCKRSGYKQA----MKLLDEMRDKGCTPDIVTYNVVVNGIC 113
Query: 216 KAGGYEKARKLFALMAERGVQQSTVTYNSL---MSFETNYKEVSKIYDQMQRAGLQPDVV 272
+ G + A + + G + +TV+YN + + +++ ++ +M + G P+VV
Sbjct: 114 QEGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVV 173
Query: 273 SYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCM 332
++ +LI+ + E AL V E++ G P +YN LL AF +D+A M
Sbjct: 174 TFNMLISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLM 233
Query: 333 RRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNL 392
C PDI SY T+L+A + +++ A + +LK G P +I+Y T+I G K
Sbjct: 234 VSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKT 293
Query: 393 EKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKN-I 451
++ +E+ ++M G++P+ ++TI + + A+ + +++ G P+ N I
Sbjct: 294 KEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAI 353
Query: 452 LLSLAKTADERNEAN---ELLGNFNHPN 476
+L L K + + + ++GN PN
Sbjct: 354 ILGLCKRRETHSAIDLFAYMIGNGCMPN 381
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 80/286 (27%), Positives = 131/286 (45%), Gaps = 6/286 (2%)
Query: 207 FHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSK---IYDQMQ 263
++ M+ Y AG + AR+L +AE V+ TYN+L+ + + D+M
Sbjct: 3 YNAMVAGYCGAGQLDAARRL---VAEMPVEPDAYTYNTLIRGLCGRGRTANALAVLDEML 59
Query: 264 RAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVD 323
R PDVV+Y +L+ A K ++A+ + +EM D G P YN++++ G VD
Sbjct: 60 RRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVD 119
Query: 324 QARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLI 383
A K + C P+ SY +L A E AE+ + Q G PNV+T+ LI
Sbjct: 120 DAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLI 179
Query: 384 KGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFP 443
+ +E +E+ +++ G PN + ++ A+ K K D A+ + M S G
Sbjct: 180 SFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCY 239
Query: 444 PDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGINGLSISVD 489
PD + N LL+ + E + A ELL P + + +D
Sbjct: 240 PDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVID 285
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 66/286 (23%), Positives = 127/286 (44%), Gaps = 3/286 (1%)
Query: 199 PLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSF---ETNYKEV 255
P++PD ++ +I G A + M R VTY L+ + YK+
Sbjct: 27 PVEPDAYTYNTLIRGLCGRGRTANALAVLDEMLRRRCVPDVVTYTILLEATCKRSGYKQA 86
Query: 256 SKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDA 315
K+ D+M+ G PD+V+Y +++N + R ++A+ + + G P +YNI+L
Sbjct: 87 MKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKG 146
Query: 316 FAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPN 375
+ + A + M + C P++ ++ ++S +E A + ++ + G PN
Sbjct: 147 LCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCTPN 206
Query: 376 VITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYK 435
++Y L+ + K ++K M D M G P+ + T++ A ++ + D AV
Sbjct: 207 SLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLH 266
Query: 436 EMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGI 481
+++ G P + N ++ A + EA ELL +P I
Sbjct: 267 QLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDI 312
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/252 (23%), Positives = 107/252 (42%), Gaps = 42/252 (16%)
Query: 81 EVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEA 140
EVLE + + N + + L+ A+ KQ +KA L M +G P +VS+ L+ A
Sbjct: 193 EVLEQIP-KYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTA 251
Query: 141 YGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPL 200
R G A + +++ G P ++Y ++ +A K KEA E LL+E
Sbjct: 252 LCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALE----LLNE----- 302
Query: 201 KPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSL---MSFETNYKEVSK 257
M +G+Q +TY+++ + E ++ +
Sbjct: 303 -----------------------------MVSKGLQPDIITYSTIAAGLCREDRIEDAIR 333
Query: 258 IYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFA 317
+ ++Q G++P+ V Y +I K R A+ +F M+ G P Y IL++ A
Sbjct: 334 AFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTILIEGLA 393
Query: 318 ISGMVDQARTVF 329
G++ +AR +
Sbjct: 394 YEGLIKEARDLL 405
>gi|359485438|ref|XP_003633275.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 572
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 96/392 (24%), Positives = 171/392 (43%), Gaps = 6/392 (1%)
Query: 101 MLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSS 160
+LI ++ A VL + K GY PS + T L+ G+ A +F +M
Sbjct: 94 ILINSFCHLNRLGFAFSVLGDILKLGYQPSTATFTTLIRGLCVEGKIGEALQLFDKMTGE 153
Query: 161 GPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGY 220
G +P LTY ++ + A ++ E+ +P ++ +I K
Sbjct: 154 GFQPDVLTYGTLINGLCKVGNTSTAIRFLRSM---EQRNCRPTVVVYSTIIDSLCKDRQL 210
Query: 221 EKARKLFALMAERGVQQSTVTYNSL---MSFETNYKEVSKIYDQMQRAGLQPDVVSYALL 277
+A LF+ M +G+ + TY+SL + ++KE +++ M + PD +++ L
Sbjct: 211 TEALSLFSDMLAKGISPNNFTYSSLIHGLCILGHWKEAIRLFYAMIHRKIMPDQLTFNTL 270
Query: 278 INAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRC 337
++A K +A V + M+ + ++P YN L+D + + + VF M R C
Sbjct: 271 VDALCKEGMVVKAHYVVDVMIQSDLKPDVVTYNSLMDGHCLRSEMGKTVNVFDTMVRKGC 330
Query: 338 SPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMME 397
P + SYTT+++ Y M+ A F + Q G +P+ +TY TLI G V L +
Sbjct: 331 VPSVISYTTLINGYCKIQIMDKAMGLFEEMSQQGLIPDTVTYNTLIHGLCHVGRLRDAIA 390
Query: 398 IYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAK 457
++ +M V G P+ + + D KN A+V K +E PD +I++
Sbjct: 391 LFHEMVVYGQIPDLVTYRILFDYLCKNHRLAEAMVLLKVIEGTNLDPDIHIYSIVMDGMC 450
Query: 458 TADERNEANELLGNFNHPNNEPGINGLSISVD 489
A E A +L + P + +I ++
Sbjct: 451 RAGELEAARDLFSKLSSKGLHPDVRTYTIMIN 482
Score = 138 bits (347), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 103/444 (23%), Positives = 172/444 (38%), Gaps = 70/444 (15%)
Query: 99 FLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQ 158
F LI +G +A ++ M +G+ P V+++ L+ + G A R M+
Sbjct: 127 FTTLIRGLCVEGKIGEALQLFDKMTGEGFQPDVLTYGTLINGLCKVGNTSTAIRFLRSME 186
Query: 159 SSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSP------------------- 199
RP+ + Y I+ + + EA +F +L + SP
Sbjct: 187 QRNCRPTVVVYSTIIDSLCKDRQLTEALSLFSDMLAKGISPNNFTYSSLIHGLCILGHWK 246
Query: 200 -------------LKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLM 246
+ PDQ F+ ++ K G KA + +M + ++ VTYNSLM
Sbjct: 247 EAIRLFYAMIHRKIMPDQLTFNTLVDALCKEGMVVKAHYVVDVMIQSDLKPDVVTYNSLM 306
Query: 247 SFETNYKEVSK---IYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVR 303
E+ K ++D M R G P V+SY LIN Y K + ++A+ +FEEM G+
Sbjct: 307 DGHCLRSEMGKTVNVFDTMVRKGCVPSVISYTTLINGYCKIQIMDKAMGLFEEMSQQGLI 366
Query: 304 PTHKAYNILLDAFAISGMVDQARTVF---------------------------------- 329
P YN L+ G + A +F
Sbjct: 367 PDTVTYNTLIHGLCHVGRLRDAIALFHEMVVYGQIPDLVTYRILFDYLCKNHRLAEAMVL 426
Query: 330 -KCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAK 388
K + PDI Y+ ++ A ++E A F +L G P+V TY +I G +
Sbjct: 427 LKVIEGTNLDPDIHIYSIVMDGMCRAGELEAARDLFSKLSSKGLHPDVRTYTIMINGLCQ 486
Query: 389 VNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKA 448
L + +++ +M NG PN + I + +N + A+ ++EM S GF D
Sbjct: 487 QGLLAEASKLFGEMDENGCSPNACTYNLITRGFLRNNETLRAIQLFQEMLSRGFSIDVST 546
Query: 449 KNILLSLAKTADERNEANELLGNF 472
+L+ + ++L F
Sbjct: 547 TTLLVEMLSDDGLDQSVKQILCEF 570
Score = 132 bits (331), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 92/396 (23%), Positives = 172/396 (43%), Gaps = 6/396 (1%)
Query: 97 MDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRR 156
+DF L+T+ + ++ + M+ G + + L+ ++ R A ++
Sbjct: 55 VDFSKLLTSITRMKHYSTVLSLYKQMDSFGIPHNTYTLNILINSFCHLNRLGFAFSVLGD 114
Query: 157 MQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKK 216
+ G +PS T+ +++ K EA ++F + E +PD + +I K
Sbjct: 115 ILKLGYQPSTATFTTLIRGLCVEGKIGEALQLFDKMTGEG---FQPDVLTYGTLINGLCK 171
Query: 217 AGGYEKARKLFALMAERGVQQSTVTYNSL---MSFETNYKEVSKIYDQMQRAGLQPDVVS 273
G A + M +R + + V Y+++ + + E ++ M G+ P+ +
Sbjct: 172 VGNTSTAIRFLRSMEQRNCRPTVVVYSTIIDSLCKDRQLTEALSLFSDMLAKGISPNNFT 231
Query: 274 YALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMR 333
Y+ LI+ +EA+ +F M+ + P +N L+DA GMV +A V M
Sbjct: 232 YSSLIHGLCILGHWKEAIRLFYAMIHRKIMPDQLTFNTLVDALCKEGMVVKAHYVVDVMI 291
Query: 334 RDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLE 393
+ PD+ +Y +++ + S+M F + + G VP+VI+Y TLI GY K+ ++
Sbjct: 292 QSDLKPDVVTYNSLMDGHCLRSEMGKTVNVFDTMVRKGCVPSVISYTTLINGYCKIQIMD 351
Query: 394 KMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILL 453
K M ++++M G+ P+ + T++ A+ + EM G PD IL
Sbjct: 352 KAMGLFEEMSQQGLIPDTVTYNTLIHGLCHVGRLRDAIALFHEMVVYGQIPDLVTYRILF 411
Query: 454 SLAKTADERNEANELLGNFNHPNNEPGINGLSISVD 489
EA LL N +P I+ SI +D
Sbjct: 412 DYLCKNHRLAEAMVLLKVIEGTNLDPDIHIYSIVMD 447
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 73/328 (22%), Positives = 142/328 (43%), Gaps = 41/328 (12%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
+++ F L+ A K+G KA V+ M + P VV++ +LM+ + +F
Sbjct: 263 DQLTFNTLVDALCKEGMVVKAHYVVDVMIQSDLKPDVVTYNSLMDGHCLRSEMGKTVNVF 322
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
M G PS ++Y TL++ Y
Sbjct: 323 DTMVRKGCVPSVISYT--------------------TLING------------------Y 344
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSL---MSFETNYKEVSKIYDQMQRAGLQPDV 271
K +KA LF M+++G+ TVTYN+L + ++ ++ +M G PD+
Sbjct: 345 CKIQIMDKAMGLFEEMSQQGLIPDTVTYNTLIHGLCHVGRLRDAIALFHEMVVYGQIPDL 404
Query: 272 VSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKC 331
V+Y +L + K R EA+ + + + + P Y+I++D +G ++ AR +F
Sbjct: 405 VTYRILFDYLCKNHRLAEAMVLLKVIEGTNLDPDIHIYSIVMDGMCRAGELEAARDLFSK 464
Query: 332 MRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNN 391
+ PD+ +YT M++ + A K F + ++G PN TY + +G+ + N
Sbjct: 465 LSSKGLHPDVRTYTIMINGLCQQGLLAEASKLFGEMDENGCSPNACTYNLITRGFLRNNE 524
Query: 392 LEKMMEIYDKMRVNGIKPNQTIFTTIMD 419
+ ++++ +M G + + T +++
Sbjct: 525 TLRAIQLFQEMLSRGFSIDVSTTTLLVE 552
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 55/234 (23%), Positives = 103/234 (44%), Gaps = 3/234 (1%)
Query: 223 ARKLFALMAERGVQQSTVTYNSLMSFET---NYKEVSKIYDQMQRAGLQPDVVSYALLIN 279
A LF M S V ++ L++ T +Y V +Y QM G+ + + +LIN
Sbjct: 38 ALSLFNRMLRMRPPPSIVDFSKLLTSITRMKHYSTVLSLYKQMDSFGIPHNTYTLNILIN 97
Query: 280 AYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSP 339
++ R A +V ++L G +P+ + L+ + G + +A +F M + P
Sbjct: 98 SFCHLNRLGFAFSVLGDILKLGYQPSTATFTTLIRGLCVEGKIGEALQLFDKMTGEGFQP 157
Query: 340 DICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIY 399
D+ +Y T+++ + A +F R ++Q P V+ Y T+I K L + + ++
Sbjct: 158 DVLTYGTLINGLCKVGNTSTAIRFLRSMEQRNCRPTVVVYSTIIDSLCKDRQLTEALSLF 217
Query: 400 DKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILL 453
M GI PN +++++ + A+ + M PDQ N L+
Sbjct: 218 SDMLAKGISPNNFTYSSLIHGLCILGHWKEAIRLFYAMIHRKIMPDQLTFNTLV 271
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 60/239 (25%), Positives = 111/239 (46%), Gaps = 9/239 (3%)
Query: 97 MDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRR 156
+ + LI Y K +KA + M+++G P V++ L+ GR ++A A+F
Sbjct: 335 ISYTTLINGYCKIQIMDKAMGLFEEMSQQGLIPDTVTYNTLIHGLCHVGRLRDAIALFHE 394
Query: 157 MQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDE-EKSPLKPDQKMFHMMIYMYK 215
M G P +TY+I+ + ++ EA M LL E + L PD ++ +++
Sbjct: 395 MVVYGQIPDLVTYRILFDYLCKNHRLAEA----MVLLKVIEGTNLDPDIHIYSIVMDGMC 450
Query: 216 KAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETN---YKEVSKIYDQMQRAGLQPDVV 272
+AG E AR LF+ ++ +G+ TY +++ E SK++ +M G P+
Sbjct: 451 RAGELEAARDLFSKLSSKGLHPDVRTYTIMINGLCQQGLLAEASKLFGEMDENGCSPNAC 510
Query: 273 SYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKC 331
+Y L+ + + A+ +F+EML G +L++ + G+ DQ+ C
Sbjct: 511 TYNLITRGFLRNNETLRAIQLFQEMLSRGFSIDVSTTTLLVEMLSDDGL-DQSVKQILC 568
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 35/173 (20%), Positives = 64/173 (36%)
Query: 322 VDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGT 381
+D A ++F M R R P I ++ +L++ ++++ G N T
Sbjct: 35 IDDALSLFNRMLRMRPPPSIVDFSKLLTSITRMKHYSTVLSLYKQMDSFGIPHNTYTLNI 94
Query: 382 LIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCG 441
LI + +N L + + G +P+ FTT++ A+ + +M G
Sbjct: 95 LINSFCHLNRLGFAFSVLGDILKLGYQPSTATFTTLIRGLCVEGKIGEALQLFDKMTGEG 154
Query: 442 FPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGINGLSISVDEEDDD 494
F PD L++ + A L + N P + S +D D
Sbjct: 155 FQPDVLTYGTLINGLCKVGNTSTAIRFLRSMEQRNCRPTVVVYSTIIDSLCKD 207
>gi|357518651|ref|XP_003629614.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355523636|gb|AET04090.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 592
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 103/409 (25%), Positives = 181/409 (44%), Gaps = 12/409 (2%)
Query: 68 VRLKQLKKWNVVSEVLEWLRI--QSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKK 125
V + L K SE + WLR + W+ N + + ++ K G ++A + M+ K
Sbjct: 186 VLINGLCKMGKTSEAVGWLRKMEERNWNPNVVVYSTVMDGLCKDGLVSEALGLCLEMSGK 245
Query: 126 GYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEA 185
G P++V++T L++ GR+K A ++ M G P + I++ + + K +A
Sbjct: 246 GIKPNLVTYTCLIQGLCNFGRWKEAGSLLDEMMKMGVMPDLQSLNILVDVLCKEGKIMQA 305
Query: 186 EEV--FMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYN 243
+ V FM L+ E PD ++ +I Y ++A ++F LM RG V Y
Sbjct: 306 KSVIGFMILVGEV-----PDVFTYNSLIDRYCLQNQMDEATRVFELMVSRGCLPDIVAYT 360
Query: 244 SLMSFETNYKEVSK---IYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDA 300
SL+ K ++K + D+M + G PDVV++ LI + + R A +F M
Sbjct: 361 SLIHGWCKIKNINKAMHLLDEMIKVGFTPDVVTWTTLIGGFCQVGRPLAAKELFLNMHKY 420
Query: 301 GVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGA 360
G P + I+LD S ++ +A ++F M + +I Y+ +L +A + A
Sbjct: 421 GQVPNLQTCAIILDGLCKSQLLSEALSLFHAMEKSNLDLNIVIYSIILDGMCSAGKLNTA 480
Query: 361 EKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDA 420
+ F L G NV Y +I G+AK L+K ++ M NG P+ + +
Sbjct: 481 LELFSCLPAKGLQINVYAYTIMINGFAKQGLLDKAEDLLSNMEENGCMPDSCTYNVFVQG 540
Query: 421 YGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELL 469
++ ++ + M GF D ++++ T NE E L
Sbjct: 541 LVAEREIARSIKYLTMMRDKGFSVDATTTEMIINYLSTNQGDNELREFL 589
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 108/420 (25%), Positives = 190/420 (45%), Gaps = 15/420 (3%)
Query: 57 PLPK----DLVLGTLVRLKQLKK-WNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGD 111
PLP L+LG +V++K ++V E+ L I+ D ++ ++ + K
Sbjct: 71 PLPSVIDFTLLLGFIVKMKHYTTAISLVKEMHSSLGIKP--DTFILNVVINSLCHLKLVA 128
Query: 112 FNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQI 171
F + VL M K G PSVV+ T L+ G A + ++ +G R TY +
Sbjct: 129 FGFS--VLGTMLKLGLEPSVVTFTILINGLCVKGDVGRAVELVDHVEKTGYRSDVKTYGV 186
Query: 172 ILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMA 231
++ + K EA L E+ P+ ++ ++ K G +A L M+
Sbjct: 187 LINGLCKMGKTSEAVG---WLRKMEERNWNPNVVVYSTVMDGLCKDGLVSEALGLCLEMS 243
Query: 232 ERGVQQSTVTYNSLMSFETNY---KEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREE 288
+G++ + VTY L+ N+ KE + D+M + G+ PD+ S +L++ K +
Sbjct: 244 GKGIKPNLVTYTCLIQGLCNFGRWKEAGSLLDEMMKMGVMPDLQSLNILVDVLCKEGKIM 303
Query: 289 EALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTML 348
+A +V M+ G P YN L+D + + +D+A VF+ M C PDI +YT+++
Sbjct: 304 QAKSVIGFMILVGEVPDVFTYNSLIDRYCLQNQMDEATRVFELMVSRGCLPDIVAYTSLI 363
Query: 349 SAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIK 408
+ ++ A + + GF P+V+T+ TLI G+ +V E++ M G
Sbjct: 364 HGWCKIKNINKAMHLLDEMIKVGFTPDVVTWTTLIGGFCQVGRPLAAKELFLNMHKYGQV 423
Query: 409 PNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANEL 468
PN I+D K++ A+ + ME + +I+L +A + N A EL
Sbjct: 424 PNLQTCAIILDGLCKSQLLSEALSLFHAMEKSNLDLNIVIYSIILDGMCSAGKLNTALEL 483
Score = 112 bits (279), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 80/383 (20%), Positives = 165/383 (43%), Gaps = 43/383 (11%)
Query: 101 MLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSS 160
+LI K G ++A L M ++ + P+VV ++ +M+ + G A + M
Sbjct: 186 VLINGLCKMGKTSEAVGWLRKMEERNWNPNVVVYSTVMDGLCKDGLVSEALGLCLEMSGK 245
Query: 161 GPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEE-KSPLKPDQKMFHMMIYMYKKAGG 219
G +P+ +TY +++ ++KEA +LLDE K + PD + ++++ + K G
Sbjct: 246 GIKPNLVTYTCLIQGLCNFGRWKEAG----SLLDEMMKMGVMPDLQSLNILVDVLCKEGK 301
Query: 220 YEKARKLFALMAERGVQQSTVTYNSLM---SFETNYKEVSKIYDQMQRAGLQPDVVSYAL 276
+A+ + M G TYNSL+ + E +++++ M G PD+V+Y
Sbjct: 302 IMQAKSVIGFMILVGEVPDVFTYNSLIDRYCLQNQMDEATRVFELMVSRGCLPDIVAYTS 361
Query: 277 LINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDR 336
LI+ + K + +A+ + +EM+ G
Sbjct: 362 LIHGWCKIKNINKAMHLLDEMIKVGF---------------------------------- 387
Query: 337 CSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMM 396
+PD+ ++TT++ + A++ F + + G VPN+ T ++ G K L + +
Sbjct: 388 -TPDVVTWTTLIGGFCQVGRPLAAKELFLNMHKYGQVPNLQTCAIILDGLCKSQLLSEAL 446
Query: 397 EIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLA 456
++ M + + N I++ I+D ++A+ + + + G + A I+++
Sbjct: 447 SLFHAMEKSNLDLNIVIYSIILDGMCSAGKLNTALELFSCLPAKGLQINVYAYTIMINGF 506
Query: 457 KTADERNEANELLGNFNHPNNEP 479
++A +LL N P
Sbjct: 507 AKQGLLDKAEDLLSNMEENGCMP 529
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/259 (20%), Positives = 111/259 (42%), Gaps = 4/259 (1%)
Query: 216 KAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKE----VSKIYDQMQRAGLQPDV 271
K ++A F MA+ S + + L+ F K +S + + G++PD
Sbjct: 52 KLKSIDEALNFFHTMAKMNPLPSVIDFTLLLGFIVKMKHYTTAISLVKEMHSSLGIKPDT 111
Query: 272 VSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKC 331
++IN+ + +V ML G+ P+ + IL++ + G V +A +
Sbjct: 112 FILNVVINSLCHLKLVAFGFSVLGTMLKLGLEPSVVTFTILINGLCVKGDVGRAVELVDH 171
Query: 332 MRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNN 391
+ + D+ +Y +++ A + R++++ + PNV+ Y T++ G K
Sbjct: 172 VEKTGYRSDVKTYGVLINGLCKMGKTSEAVGWLRKMEERNWNPNVVVYSTVMDGLCKDGL 231
Query: 392 LEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNI 451
+ + + + +M GIKPN +T ++ + A EM G PD ++ NI
Sbjct: 232 VSEALGLCLEMSGKGIKPNLVTYTCLIQGLCNFGRWKEAGSLLDEMMKMGVMPDLQSLNI 291
Query: 452 LLSLAKTADERNEANELLG 470
L+ + + +A ++G
Sbjct: 292 LVDVLCKEGKIMQAKSVIG 310
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/237 (21%), Positives = 99/237 (41%), Gaps = 1/237 (0%)
Query: 254 EVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDA-GVRPTHKAYNIL 312
E + M + P V+ + LL+ K + A+++ +EM + G++P N++
Sbjct: 58 EALNFFHTMAKMNPLPSVIDFTLLLGFIVKMKHYTTAISLVKEMHSSLGIKPDTFILNVV 117
Query: 313 LDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGF 372
+++ +V +V M + P + ++T +++ D+ A + +++ G+
Sbjct: 118 INSLCHLKLVAFGFSVLGTMLKLGLEPSVVTFTILINGLCVKGDVGRAVELVDHVEKTGY 177
Query: 373 VPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVV 432
+V TYG LI G K+ + + KM PN +++T+MD K+ A+
Sbjct: 178 RSDVKTYGVLINGLCKMGKTSEAVGWLRKMEERNWNPNVVVYSTVMDGLCKDGLVSEALG 237
Query: 433 WYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGINGLSISVD 489
EM G P+ L+ EA LL P + L+I VD
Sbjct: 238 LCLEMSGKGIKPNLVTYTCLIQGLCNFGRWKEAGSLLDEMMKMGVMPDLQSLNILVD 294
>gi|302816356|ref|XP_002989857.1| hypothetical protein SELMODRAFT_45144 [Selaginella moellendorffii]
gi|300142423|gb|EFJ09124.1| hypothetical protein SELMODRAFT_45144 [Selaginella moellendorffii]
Length = 394
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 87/350 (24%), Positives = 176/350 (50%), Gaps = 13/350 (3%)
Query: 62 LVLGTLVRLKQLKKWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSF 121
+V+G L ++ +L ++ + E + +QS +++ + +L+ + K + + ++
Sbjct: 54 VVIGHLCKINKL---DLAASYFEQM-VQSGCLPDKVTYTVLVHSLFKACKWEQGHQIFEE 109
Query: 122 MNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANK 181
M KG++P +V++ ++ Y + GR A ++ RR++ +G PS Y ++ + ++
Sbjct: 110 MLSKGHSPELVTYATVVNGYCKAGRIDQALSLMRRLKGTGRSPSGSLYSTLIDGLCKHDR 169
Query: 182 FKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVT 241
+EA E+F E + D ++ I KAG ++A+ + M E G V+
Sbjct: 170 HEEARELF-----EMAAGDVQDVIVYTSFISGLCKAGKLDEAKAVHVKMIEAGCAPDPVS 224
Query: 242 YNSL---MSFETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEML 298
YN + + + E ++ DQ P V +L++ K+RR EEA + E ML
Sbjct: 225 YNVIIYSLCKDNRVSEAKELMDQAMERKCMPGVPVCTVLVDGLCKSRRVEEACVILERML 284
Query: 299 DAGVR-PTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDM 357
+AG R P+ Y+ ++D + +D A V + MRR C PD+ +YT ++ A+ +
Sbjct: 285 EAGDRAPSVVTYSAVIDGLCKADRLDDAYIVLQKMRRAGCVPDVVTYTAIIDAFCKVGRL 344
Query: 358 EGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGI 407
+ A + F+R+ + G +V+ Y LI+GY + +++ + + ++M GI
Sbjct: 345 DEARELFQRMHERGCASDVVAYNILIRGYCRAAKVDEAIAMIEEMAGRGI 394
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 88/361 (24%), Positives = 165/361 (45%), Gaps = 9/361 (2%)
Query: 113 NKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQII 172
NKA ++ M P +T ++ + + A + F +M SG P +TY ++
Sbjct: 31 NKALQIFHQMIDMKVKPDAFLYTVVIGHLCKINKLDLAASYFEQMVQSGCLPDKVTYTVL 90
Query: 173 LKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAE 232
+ +A K+++ ++F +L + SP + + ++ Y KAG ++A L +
Sbjct: 91 VHSLFKACKWEQGHQIFEEMLSKGHSP---ELVTYATVVNGYCKAGRIDQALSLMRRLKG 147
Query: 233 RGVQQSTVTYNSL---MSFETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEE 289
G S Y++L + ++E ++++ AG DV+ Y I+ KA + +E
Sbjct: 148 TGRSPSGSLYSTLIDGLCKHDRHEEARELFEMA--AGDVQDVIVYTSFISGLCKAGKLDE 205
Query: 290 ALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLS 349
A AV +M++AG P +YN+++ + V +A+ + +C P + T ++
Sbjct: 206 AKAVHVKMIEAGCAPDPVSYNVIIYSLCKDNRVSEAKELMDQAMERKCMPGVPVCTVLVD 265
Query: 350 AYVNASDMEGAEKFFRRLKQDG-FVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIK 408
+ +E A R+ + G P+V+TY +I G K + L+ + KMR G
Sbjct: 266 GLCKSRRVEEACVILERMLEAGDRAPSVVTYSAVIDGLCKADRLDDAYIVLQKMRRAGCV 325
Query: 409 PNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANEL 468
P+ +T I+DA+ K D A ++ M G D A NIL+ A + +EA +
Sbjct: 326 PDVVTYTAIIDAFCKVGRLDEARELFQRMHERGCASDVVAYNILIRGYCRAAKVDEAIAM 385
Query: 469 L 469
+
Sbjct: 386 I 386
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 72/269 (26%), Positives = 127/269 (47%), Gaps = 9/269 (3%)
Query: 226 LFALMAERGVQQSTVTYNSLMS--FETNYK-EVSKIYDQMQRAGLQPDVVSYALLINAYG 282
L M G+ + VT+ SL+ E N+ + +I+ QM ++PD Y ++I
Sbjct: 1 LLGEMKAAGITPTIVTFGSLIRKLCELNFTNKALQIFHQMIDMKVKPDAFLYTVVIGHLC 60
Query: 283 KARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDIC 342
K + + A + FE+M+ +G P Y +L+ + + +Q +F+ M SP++
Sbjct: 61 KINKLDLAASYFEQMVQSGCLPDKVTYTVLVHSLFKACKWEQGHQIFEEMLSKGHSPELV 120
Query: 343 SYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKM 402
+Y T+++ Y A ++ A RRLK G P+ Y TLI G K + E+ E+++
Sbjct: 121 TYATVVNGYCKAGRIDQALSLMRRLKGTGRSPSGSLYSTLIDGLCKHDRHEEARELFEM- 179
Query: 403 RVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILL-SLAKTADE 461
G + ++T+ + K D A + +M G PD + N+++ SL K D
Sbjct: 180 -AAGDVQDVIVYTSFISGLCKAGKLDEAKAVHVKMIEAGCAPDPVSYNVIIYSLCK--DN 236
Query: 462 R-NEANELLGNFNHPNNEPGINGLSISVD 489
R +EA EL+ PG+ ++ VD
Sbjct: 237 RVSEAKELMDQAMERKCMPGVPVCTVLVD 265
>gi|449524916|ref|XP_004169467.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At1g74580-like [Cucumis
sativus]
Length = 877
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 99/400 (24%), Positives = 176/400 (44%), Gaps = 6/400 (1%)
Query: 92 WDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAE 151
+FN + + +I+ + K+ +A + M K+G P +++ L+ + G + +E
Sbjct: 177 CEFNAVSYCAVISGFYKENCQIEAYHLFDEMLKQGICPDILTFNKLIHVLCKKGNVQESE 236
Query: 152 AIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMI 211
+F ++ G P+ T+ I ++ EA + +++ E L PD ++ +I
Sbjct: 237 KLFSKVMKRGVCPNLFTFNIFIQGLCRKGAIDEAARLLESIVSE---GLTPDVISYNTLI 293
Query: 212 YMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETN---YKEVSKIYDQMQRAGLQ 268
+ K +A M GV+ + TYN++++ + KI G
Sbjct: 294 CGFCKHSKLVEAECYLHKMVNSGVEPNEFTYNTIINGFCKAGMMQNADKILRDAMFKGFI 353
Query: 269 PDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTV 328
PD +Y+ LIN A+AVF E ++ G + + YN L+ + G+V QA +
Sbjct: 354 PDEFTYSSLINGLCNDGDMNRAMAVFYEAMEKGFKHSIILYNTLVKGLSKQGLVLQALQL 413
Query: 329 FKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAK 388
K M CSPDI +Y +++ + A G +P++ T+ TLI GY K
Sbjct: 414 MKDMMEHGCSPDIWTYNLVVNGLCKMGCLSDANGILNDAIAKGCIPDIFTFNTLIDGYCK 473
Query: 389 VNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKA 448
N++K +EI D M +GI P+ + T+++ K + D+ V +K M G P+
Sbjct: 474 QRNMDKAIEILDTMLSHGITPDVITYNTLLNGLCKARKLDNVVDTFKAMLEKGCTPNIIT 533
Query: 449 KNILLSLAKTADERNEANELLGNFNHPNNEPGINGLSISV 488
NIL+ + +EA EL P I L +
Sbjct: 534 YNILIESFCKDRKVSEAMELFKEMKTRGLTPDIVTLCTLI 573
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 81/347 (23%), Positives = 159/347 (45%), Gaps = 6/347 (1%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N F + I ++G ++A ++L + +G P V+S+ L+ + + + AE
Sbjct: 250 NLFTFNIFIQGLCRKGAIDEAARLLESIVSEGLTPDVISYNTLICGFCKHSKLVEAECYL 309
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
+M +SG P+ TY I+ F +A + A+++ L D PD+ + +I
Sbjct: 310 HKMVNSGVEPNEFTYNTIINGFCKAGMMQNADKI---LRDAMFKGFIPDEFTYSSLINGL 366
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSL---MSFETNYKEVSKIYDQMQRAGLQPDV 271
G +A +F E+G + S + YN+L +S + + ++ M G PD+
Sbjct: 367 CNDGDMNRAMAVFYEAMEKGFKHSIILYNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDI 426
Query: 272 VSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKC 331
+Y L++N K +A + + + G P +N L+D + +D+A +
Sbjct: 427 WTYNLVVNGLCKMGCLSDANGILNDAIAKGCIPDIFTFNTLIDGYCKQRNMDKAIEILDT 486
Query: 332 MRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNN 391
M +PD+ +Y T+L+ A ++ F+ + + G PN+ITY LI+ + K
Sbjct: 487 MLSHGITPDVITYNTLLNGLCKARKLDNVVDTFKAMLEKGCTPNIITYNILIESFCKDRK 546
Query: 392 LEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEME 438
+ + ME++ +M+ G+ P+ T++ N + D A + +E
Sbjct: 547 VSEAMELFKEMKTRGLTPDIVTLCTLICGLCSNGELDKAYELFVTIE 593
Score = 131 bits (329), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 110/450 (24%), Positives = 188/450 (41%), Gaps = 70/450 (15%)
Query: 75 KWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSH 134
K+ + +VL +R E ++ ++ YG++G +A V M+ PSV S+
Sbjct: 55 KFEAMEDVLAEMRKNVDSKMLEGVYIGIMRDYGRKGKVQEAVNVFERMDFYDCEPSVQSY 114
Query: 135 TALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANK------------- 181
A+M G + A ++ RM+ G P T+ I +K F +
Sbjct: 115 NAIMNILVEYGYFSQAHKVYMRMKDIGIYPDVYTHTIRMKSFCITGRPTAALRLLNNMPG 174
Query: 182 -----------------FKEAEEV-FMTLLDEE-KSPLKPDQKMFHMMIYMYKKAGGYEK 222
+KE ++ L DE K + PD F+ +I++ K G ++
Sbjct: 175 QGCEFNAVSYCAVISGFYKENCQIEAYHLFDEMLKQGICPDILTFNKLIHVLCKKGNVQE 234
Query: 223 ARKLFALMAERGVQQSTVTYNSL---MSFETNYKEVSKIYDQMQRAGLQPDVVSYALLIN 279
+ KLF+ + +RGV + T+N + + E +++ + + GL PDV+SY LI
Sbjct: 235 SEKLFSKVMKRGVCPNLFTFNIFIQGLCRKGAIDEAARLLESIVSEGLTPDVISYNTLIC 294
Query: 280 AYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSP 339
+ K + EA +M+++GV P YN +++ F +GM+ A + + P
Sbjct: 295 GFCKHSKLVEAECYLHKMVNSGVEPNEFTYNTIINGFCKAGMMQNADKILRDAMFKGFIP 354
Query: 340 DICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAK----------- 388
D +Y+++++ N DM A F + GF ++I Y TL+KG +K
Sbjct: 355 DEFTYSSLINGLCNDGDMNRAMAVFYEAMEKGFKHSIILYNTLVKGLSKQGLVLQALQLM 414
Query: 389 ------------------VNNLEKMMEIYDKMRV------NGIKPNQTIFTTIMDAYGKN 424
VN L KM + D + G P+ F T++D Y K
Sbjct: 415 KDMMEHGCSPDIWTYNLVVNGLCKMGCLSDANGILNDAIAKGCIPDIFTFNTLIDGYCKQ 474
Query: 425 KDFDSAVVWYKEMESCGFPPDQKAKNILLS 454
++ D A+ M S G PD N LL+
Sbjct: 475 RNMDKAIEILDTMLSHGITPDVITYNTLLN 504
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 86/382 (22%), Positives = 169/382 (44%), Gaps = 7/382 (1%)
Query: 88 IQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRY 147
+ S + NE + +I + K G A+K+L KG+ P ++++L+ G
Sbjct: 313 VNSGVEPNEFTYNTIINGFCKAGMMQNADKILRDAMFKGFIPDEFTYSSLINGLCNDGDM 372
Query: 148 KNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMF 207
A A+F G + S + Y ++K + +A ++ +++ SP D +
Sbjct: 373 NRAMAVFYEAMEKGFKHSIILYNTLVKGLSKQGLVLQALQLMKDMMEHGCSP---DIWTY 429
Query: 208 HMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLM---SFETNYKEVSKIYDQMQR 264
++++ K G A + +G T+N+L+ + N + +I D M
Sbjct: 430 NLVVNGLCKMGCLSDANGILNDAIAKGCIPDIFTFNTLIDGYCKQRNMDKAIEILDTMLS 489
Query: 265 AGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQ 324
G+ PDV++Y L+N KAR+ + + F+ ML+ G P YNIL+++F V +
Sbjct: 490 HGITPDVITYNTLLNGLCKARKLDNVVDTFKAMLEKGCTPNIITYNILIESFCKDRKVSE 549
Query: 325 ARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRL-KQDGFVPNVITYGTLI 383
A +FK M+ +PDI + T++ + +++ A + F + K+ F + + +I
Sbjct: 550 AMELFKEMKTRGLTPDIVTLCTLICGLCSNGELDKAYELFVTIEKEYKFSYSTAIFNIMI 609
Query: 384 KGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFP 443
+ N+ +++ KM + P+ + ++D+Y K + D A + E S G
Sbjct: 610 NAFCXKLNVSMAEKLFHKMGGSDCAPDNYTYRVMIDSYCKTGNIDLAHTFLLENISKGLV 669
Query: 444 PDQKAKNILLSLAKTADERNEA 465
P +L+ +EA
Sbjct: 670 PSFTTCGKVLNCLCVTHRLSEA 691
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 83/357 (23%), Positives = 147/357 (41%), Gaps = 42/357 (11%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
+E + LI GD N+A V +KG+ S++ + L++ + G A +
Sbjct: 355 DEFTYSSLINGLCNDGDMNRAMAVFYEAMEKGFKHSIILYNTLVKGLSKQGLVLQALQLM 414
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
+ M G P TY +++ + +A + L D PD F+ +I Y
Sbjct: 415 KDMMEHGCSPDIWTYNLVVNGLCKMGCLSDANGI---LNDAIAKGCIPDIFTFNTLIDGY 471
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSKIYDQ---MQRAGLQPDV 271
K +KA ++ M G+ +TYN+L++ +++ + D M G P++
Sbjct: 472 CKQRNMDKAIEILDTMLSHGITPDVITYNTLLNGLCKARKLDNVVDTFKAMLEKGCTPNI 531
Query: 272 VSYALLINAYGKARREEEALAVFEEMLDAGVRP-----------------THKAY----- 309
++Y +LI ++ K R+ EA+ +F+EM G+ P KAY
Sbjct: 532 ITYNILIESFCKDRKVSEAMELFKEMKTRGLTPDIVTLCTLICGLCSNGELDKAYELFVT 591
Query: 310 --------------NILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNAS 355
NI+++AF V A +F M C+PD +Y M+ +Y
Sbjct: 592 IEKEYKFSYSTAIFNIMINAFCXKLNVSMAEKLFHKMGGSDCAPDNYTYRVMIDSYCKTG 651
Query: 356 DMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQT 412
+++ A F G VP+ T G ++ + L + + I + M NGI P +
Sbjct: 652 NIDLAHTFLLENISKGLVPSFTTCGKVLNCLCVTHRLSEAVVIINLMVQNGIVPEEV 708
Score = 105 bits (261), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 83/350 (23%), Positives = 149/350 (42%), Gaps = 44/350 (12%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVS-HTALMEAYGRGGRYKNAEAIFRRMQSS 160
+I G G F E VL+ M K + + + +M YGR G+ + A +F RM
Sbjct: 46 MIEKLGLHGKFEAMEDVLAEMRKNVDSKMLEGVYIGIMRDYGRKGKVQEAVNVFERMDFY 105
Query: 161 GPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGY 220
PS +Y I+ + VE G +
Sbjct: 106 DCEPSVQSYNAIMNILVEY--------------------------------------GYF 127
Query: 221 EKARKLFALMAERGVQQSTVTYNSLM-SFETNYKEVS--KIYDQMQRAGLQPDVVSYALL 277
+A K++ M + G+ T+ M SF + + ++ + M G + + VSY +
Sbjct: 128 SQAHKVYMRMKDIGIYPDVYTHTIRMKSFCITGRPTAALRLLNNMPGQGCEFNAVSYCAV 187
Query: 278 INAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVF-KCMRRDR 336
I+ + K + EA +F+EML G+ P +N L+ G V ++ +F K M+R
Sbjct: 188 ISGFYKENCQIEAYHLFDEMLKQGICPDILTFNKLIHVLCKKGNVQESEKLFSKVMKRGV 247
Query: 337 CSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMM 396
C P++ ++ + ++ A + + +G P+VI+Y TLI G+ K + L +
Sbjct: 248 C-PNLFTFNIFIQGLCRKGAIDEAARLLESIVSEGLTPDVISYNTLICGFCKHSKLVEAE 306
Query: 397 EIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQ 446
KM +G++PN+ + TI++ + K +A ++ GF PD+
Sbjct: 307 CYLHKMVNSGVEPNEFTYNTIINGFCKAGMMQNADKILRDAMFKGFIPDE 356
>gi|357438771|ref|XP_003589662.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355478710|gb|AES59913.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 988
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 110/463 (23%), Positives = 211/463 (45%), Gaps = 52/463 (11%)
Query: 32 RRLMNQIEEVGSAVAVLRSERTRGQPLPKDLVLGTLV--RLKQLKKWNVVSEVLEWLRIQ 89
+ ++N++EEV S + + Q P + T++ R K+ + V EVL+ +R+
Sbjct: 185 KSMVNEVEEVYSVM-------IKCQIRPTIVTFNTMMDSRCKEGEVGRAV-EVLDVMRMF 236
Query: 90 SWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKN 149
D N++ + +L+ +G+F++A++++ M+ G S ++ L+ + + ++
Sbjct: 237 GC-DPNDVSYNVLVNGLSGKGEFDRAKELIEQMSMLGLKVSAHTYNPLIRGFCKKEMFEE 295
Query: 150 AEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHM 209
A + R M G P+ +TY I+ + +A +++E+ L PD ++
Sbjct: 296 ANDLRREMLGRGALPTVVTYNTIMYSLCRLGRVSDARRYLDVMVNED---LMPDLVSYNT 352
Query: 210 MIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLM----------------------- 246
+IY Y + G + +A LF+ + + + S VTYN+L+
Sbjct: 353 LIYGYSRLGNFAEALLLFSELRSKNLVPSVVTYNTLIDGGCRTGNLDIAKGMKDDMIKHG 412
Query: 247 ------SFET---------NYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEAL 291
+F N +++D+M GL+PD ++Y I K +A
Sbjct: 413 LCPDVVTFTILVRGFCQMGNLPMAKELFDEMLSRGLKPDCIAYTTRIVGELKLGNPSKAF 472
Query: 292 AVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAY 351
+ EEM G P YN+L++ G D A + + MR + PD +YT+++ A+
Sbjct: 473 GMKEEMKAEGFPPDLITYNVLINGLCKLGNFDDANELVQKMRLEGIVPDHVTYTSIIHAH 532
Query: 352 VNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQ 411
+ + + AE+ F + + G P+V+TY LI YA L+ + +D+M+ G+ PN
Sbjct: 533 LISGLLRKAEEVFSDMLKKGIHPSVVTYTVLIHSYAVRGRLDFAKKYFDEMQDKGVSPNV 592
Query: 412 TIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLS 454
+ ++ K D A + EMES G P++ IL++
Sbjct: 593 ITYNALIYGLCKENMMDVAYNLFAEMESKGVSPNKYTYTILIN 635
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 89/355 (25%), Positives = 170/355 (47%), Gaps = 6/355 (1%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
++ + + G + A + L M + P +VS+ L+ Y R G + A +F ++S
Sbjct: 318 IMYSLCRLGRVSDARRYLDVMVNEDLMPDLVSYNTLIYGYSRLGNFAEALLLFSELRSKN 377
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
PS +TY ++ A+ + ++ K L PD F +++ + + G
Sbjct: 378 LVPSVVTYNTLIDGGCRTGNLDIAKGMKDDMI---KHGLCPDVVTFTILVRGFCQMGNLP 434
Query: 222 KARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSKIY---DQMQRAGLQPDVVSYALLI 278
A++LF M RG++ + Y + + E SK + ++M+ G PD+++Y +LI
Sbjct: 435 MAKELFDEMLSRGLKPDCIAYTTRIVGELKLGNPSKAFGMKEEMKAEGFPPDLITYNVLI 494
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCS 338
N K ++A + ++M G+ P H Y ++ A ISG++ +A VF M +
Sbjct: 495 NGLCKLGNFDDANELVQKMRLEGIVPDHVTYTSIIHAHLISGLLRKAEEVFSDMLKKGIH 554
Query: 339 PDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEI 398
P + +YT ++ +Y ++ A+K+F ++ G PNVITY LI G K N ++ +
Sbjct: 555 PSVVTYTVLIHSYAVRGRLDFAKKYFDEMQDKGVSPNVITYNALIYGLCKENMMDVAYNL 614
Query: 399 YDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILL 453
+ +M G+ PN+ +T +++ + + A+ YK+M PD + L+
Sbjct: 615 FAEMESKGVSPNKYTYTILINENSNLQYWQDALKLYKDMLDREIKPDSCTHSALM 669
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 88/329 (26%), Positives = 156/329 (47%), Gaps = 12/329 (3%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
LI Y + G+F +A + S + K PSVV++ L++ R G A+ + M G
Sbjct: 353 LIYGYSRLGNFAEALLLFSELRSKNLVPSVVTYNTLIDGGCRTGNLDIAKGMKDDMIKHG 412
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
P +T+ I+++ F + A+E+F +L LKPD + I K G
Sbjct: 413 LCPDVVTFTILVRGFCQMGNLPMAKELFDEMLSRG---LKPDCIAYTTRIVGELKLGNPS 469
Query: 222 KARKLFALMAERGVQQSTVTYNSLMSFET---NYKEVSKIYDQMQRAGLQPDVVSYALLI 278
KA + M G +TYN L++ N+ + +++ +M+ G+ PD V+Y +I
Sbjct: 470 KAFGMKEEMKAEGFPPDLITYNVLINGLCKLGNFDDANELVQKMRLEGIVPDHVTYTSII 529
Query: 279 NAY---GKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRD 335
+A+ G R+ EE VF +ML G+ P+ Y +L+ ++A+ G +D A+ F M+
Sbjct: 530 HAHLISGLLRKAEE---VFSDMLKKGIHPSVVTYTVLIHSYAVRGRLDFAKKYFDEMQDK 586
Query: 336 RCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKM 395
SP++ +Y ++ + M+ A F ++ G PN TY LI + + +
Sbjct: 587 GVSPNVITYNALIYGLCKENMMDVAYNLFAEMESKGVSPNKYTYTILINENSNLQYWQDA 646
Query: 396 MEIYDKMRVNGIKPNQTIFTTIMDAYGKN 424
+++Y M IKP+ + +M K+
Sbjct: 647 LKLYKDMLDREIKPDSCTHSALMKHLSKD 675
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 93/371 (25%), Positives = 160/371 (43%), Gaps = 41/371 (11%)
Query: 137 LMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEE 196
L++ + + + +F +M ++G P +LKL + + E EEV+ ++
Sbjct: 143 LIQVFAKKLILEKCLMVFYKMVNNGLLPDVRNCNRVLKLLKDKSMVNEVEEVYSVMI--- 199
Query: 197 KSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSL---MSFETNYK 253
K ++P F+ M+ K G +A ++ +M G + V+YN L +S + +
Sbjct: 200 KCQIRPTIVTFNTMMDSRCKEGEVGRAVEVLDVMRMFGCDPNDVSYNVLVNGLSGKGEFD 259
Query: 254 EVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILL 313
++ +QM GL+ +Y LI + K EEA + EML G PT YN ++
Sbjct: 260 RAKELIEQMSMLGLKVSAHTYNPLIRGFCKKEMFEEANDLRREMLGRGALPTVVTYNTIM 319
Query: 314 DAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFV 373
+ G V AR M + PD+ SY T++ Y + A F L+ V
Sbjct: 320 YSLCRLGRVSDARRYLDVMVNEDLMPDLVSYNTLIYGYSRLGNFAEALLLFSELRSKNLV 379
Query: 374 PNVITYGTLI-----------------------------------KGYAKVNNLEKMMEI 398
P+V+TY TLI +G+ ++ NL E+
Sbjct: 380 PSVVTYNTLIDGGCRTGNLDIAKGMKDDMIKHGLCPDVVTFTILVRGFCQMGNLPMAKEL 439
Query: 399 YDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKT 458
+D+M G+KP+ +TT + K + A +EM++ GFPPD N+L++
Sbjct: 440 FDEMLSRGLKPDCIAYTTRIVGELKLGNPSKAFGMKEEMKAEGFPPDLITYNVLINGLCK 499
Query: 459 ADERNEANELL 469
++ANEL+
Sbjct: 500 LGNFDDANELV 510
Score = 75.1 bits (183), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 50/252 (19%), Positives = 108/252 (42%), Gaps = 3/252 (1%)
Query: 205 KMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSF---ETNYKEVSKIYDQ 261
K+ ++I ++ K EK +F M G+ N ++ ++ EV ++Y
Sbjct: 138 KLLDLLIQVFAKKLILEKCLMVFYKMVNNGLLPDVRNCNRVLKLLKDKSMVNEVEEVYSV 197
Query: 262 MQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGM 321
M + ++P +V++ ++++ K A+ V + M G P +YN+L++ + G
Sbjct: 198 MIKCQIRPTIVTFNTMMDSRCKEGEVGRAVEVLDVMRMFGCDPNDVSYNVLVNGLSGKGE 257
Query: 322 VDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGT 381
D+A+ + + M +Y ++ + E A R + G +P V+TY T
Sbjct: 258 FDRAKELIEQMSMLGLKVSAHTYNPLIRGFCKKEMFEEANDLRREMLGRGALPTVVTYNT 317
Query: 382 LIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCG 441
++ ++ + D M + P+ + T++ Y + +F A++ + E+ S
Sbjct: 318 IMYSLCRLGRVSDARRYLDVMVNEDLMPDLVSYNTLIYGYSRLGNFAEALLLFSELRSKN 377
Query: 442 FPPDQKAKNILL 453
P N L+
Sbjct: 378 LVPSVVTYNTLI 389
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/162 (20%), Positives = 71/162 (43%)
Query: 307 KAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRR 366
K ++L+ FA ++++ VF M + PD+ + +L + S + E+ +
Sbjct: 138 KLLDLLIQVFAKKLILEKCLMVFYKMVNNGLLPDVRNCNRVLKLLKDKSMVNEVEEVYSV 197
Query: 367 LKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKD 426
+ + P ++T+ T++ K + + +E+ D MR+ G PN + +++ +
Sbjct: 198 MIKCQIRPTIVTFNTMMDSRCKEGEVGRAVEVLDVMRMFGCDPNDVSYNVLVNGLSGKGE 257
Query: 427 FDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANEL 468
FD A ++M G N L+ + EAN+L
Sbjct: 258 FDRAKELIEQMSMLGLKVSAHTYNPLIRGFCKKEMFEEANDL 299
Score = 48.5 bits (114), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 56/108 (51%), Gaps = 3/108 (2%)
Query: 97 MDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRR 156
+ + +LI +Y +G + A+K M KG +P+V+++ AL+ + A +F
Sbjct: 558 VTYTVLIHSYAVRGRLDFAKKYFDEMQDKGVSPNVITYNALIYGLCKENMMDVAYNLFAE 617
Query: 157 MQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQ 204
M+S G P+ TY I++ +++A +++ +LD E +KPD
Sbjct: 618 MESKGVSPNKYTYTILINENSNLQYWQDALKLYKDMLDRE---IKPDS 662
>gi|9502388|gb|AAF88095.1|AC025417_23 T12C24.15 [Arabidopsis thaliana]
Length = 735
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 110/511 (21%), Positives = 238/511 (46%), Gaps = 43/511 (8%)
Query: 18 VFKDAADEAGKKNWR-RLMNQIEEVGSAVAV-LRSERTRGQPLPKDLVLGTLVRL-KQLK 74
VF +D GK ++R RL + I ++ AV L E TR +P P+ + L + + K
Sbjct: 27 VFSSVSDGKGKVSYRERLRSGIVDIKEDDAVDLFQEMTRSRPRPRLIDFSRLFSVVARTK 86
Query: 75 KWNVVSEVLEWLR----------------------------------IQSWWDFNEMDFL 100
++++V ++ + + I+ ++ + + F
Sbjct: 87 QYDLVLDLCKQMELKGIAHNLYTLSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFS 146
Query: 101 MLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSS 160
LI +G ++A +++ M + G+ P++++ AL+ G+ +A + RM +
Sbjct: 147 TLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVET 206
Query: 161 GPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGY 220
G +P+ +TY +LK+ ++ + A E+ + E+ +K D + ++I K G
Sbjct: 207 GFQPNEVTYGPVLKVMCKSGQTALAMELLRKM---EERKIKLDAVKYSIIIDGLCKDGSL 263
Query: 221 EKARKLFALMAERGVQQSTVTYNSLM---SFETNYKEVSKIYDQMQRAGLQPDVVSYALL 277
+ A LF M +G + + Y +L+ + + + +K+ M + + PDVV+++ L
Sbjct: 264 DNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSAL 323
Query: 278 INAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRC 337
I+ + K + EA + +EM+ G+ P Y L+D F +D+A + M C
Sbjct: 324 IDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGC 383
Query: 338 SPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMME 397
P+I ++ +++ Y A+ ++ + FR++ G V + +TY TLI+G+ ++ LE E
Sbjct: 384 GPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKE 443
Query: 398 IYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAK 457
++ +M ++P+ + ++D N + + A+ ++++E D NI++
Sbjct: 444 LFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMC 503
Query: 458 TADERNEANELLGNFNHPNNEPGINGLSISV 488
A + ++A +L + +P + +I +
Sbjct: 504 NASKVDDAWDLFCSLPLKGVKPDVKTYNIMI 534
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 96/401 (23%), Positives = 182/401 (45%), Gaps = 10/401 (2%)
Query: 59 PKDLVLGTLVRLKQLKKWNVVSEVLEWLRI--QSWWDFNEMDFLMLITAYGKQGDFNKAE 116
P ++ G + LK + K + +E LR + + + + ++I K G + A
Sbjct: 210 PNEVTYGPV--LKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAF 267
Query: 117 KVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLF 176
+ + M KG+ ++ +T L+ + GR+ + + R M P + + ++ F
Sbjct: 268 NLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCF 327
Query: 177 VEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQ 236
V+ K +EAEE+ ++ + + PD + +I + K +KA + LM +G
Sbjct: 328 VKEGKLREAEELHKEMI---QRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCG 384
Query: 237 QSTVTYNSLMSFETNYKEVS---KIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAV 293
+ T+N L++ + +++ +M G+ D V+Y LI + + + E A +
Sbjct: 385 PNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKEL 444
Query: 294 FEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVN 353
F+EM+ VRP +Y ILLD +G ++A +F+ + + + DI Y ++ N
Sbjct: 445 FQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCN 504
Query: 354 ASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTI 413
AS ++ A F L G P+V TY +I G K +L + ++ KM +G PN
Sbjct: 505 ASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCT 564
Query: 414 FTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLS 454
+ ++ A+ D + +E++ CGF D LS
Sbjct: 565 YNILIRAHLGEGDATKSAKLIEEIKRCGFSVDASTLRFALS 605
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 110/454 (24%), Positives = 192/454 (42%), Gaps = 112/454 (24%)
Query: 94 FNEMD----------FLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGR 143
FNEM+ + LI + G ++ K+L M K+ P VV+ +AL++ + +
Sbjct: 270 FNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVK 329
Query: 144 GGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPD 203
G+ + AE + + M G P +TY ++ F + N+ +A + ++ + P+
Sbjct: 330 EGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSK---GCGPN 386
Query: 204 QKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMS--FETNYKEVSK-IYD 260
+ F+++I Y KA + +LF M+ RGV TVTYN+L+ E EV+K ++
Sbjct: 387 IRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQ 446
Query: 261 QMQRAGLQPDVVSYALLINAYGKARREEEALAVFEE-------------------MLDA- 300
+M ++PD+VSY +L++ E+AL +FE+ M +A
Sbjct: 447 EMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNAS 506
Query: 301 ---------------GVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRD---------- 335
GV+P K YNI++ G + +A +F+ M D
Sbjct: 507 KVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYN 566
Query: 336 -----------------------RCS------------------------PDICSYTTML 348
RC PD+ ++TT+L
Sbjct: 567 ILIRAHLGEGDATKSAKLIEEIKRCGFSVDASTLRFALSTLARMLKAGHEPDVFTFTTLL 626
Query: 349 SAYV---NASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVN 405
+ NAS + A F+ +K G+ PNV+TY T+IKG N + ++ + D+M
Sbjct: 627 RPFCLEENASVYD-APTLFKNMKAMGYKPNVVTYNTVIKGLLNGNMISQVPGVLDQMFER 685
Query: 406 GIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMES 439
G +PN +T + K SA++ ++ME+
Sbjct: 686 GCQPNAVTKSTFISGLCKQDLHGSAILLLRKMEN 719
Score = 78.6 bits (192), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 74/328 (22%), Positives = 133/328 (40%), Gaps = 38/328 (11%)
Query: 75 KWNVVSEVLEWLRIQSWWDF--NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVV 132
K N++ + LE R S + + + LI + + G A+++ M + P +V
Sbjct: 399 KANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIV 458
Query: 133 SHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTL 192
S+ L++ G + A IF +++ S Y II+ A+K +A ++F +L
Sbjct: 459 SYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSL 518
Query: 193 LDEEKSPLK---PDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSF- 248
PLK PD K +++MI K G +A LF M E G + TYN L+
Sbjct: 519 ------PLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAH 572
Query: 249 --ETNYKEVSKIYDQMQRAGL----------------------QPDVVSYALLINAYGKA 284
E + + +K+ ++++R G +PDV ++ L+ +
Sbjct: 573 LGEGDATKSAKLIEEIKRCGFSVDASTLRFALSTLARMLKAGHEPDVFTFTTLLRPFCLE 632
Query: 285 RREE--EALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDIC 342
+A +F+ M G +P YN ++ M+ Q V M C P+
Sbjct: 633 ENASVYDAPTLFKNMKAMGYKPNVVTYNTVIKGLLNGNMISQVPGVLDQMFERGCQPNAV 692
Query: 343 SYTTMLSAYVNASDMEGAEKFFRRLKQD 370
+ +T +S A R+++ D
Sbjct: 693 TKSTFISGLCKQDLHGSAILLLRKMEND 720
>gi|115489794|ref|NP_001067384.1| Os12g0638900 [Oryza sativa Japonica Group]
gi|77556813|gb|ABA99609.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|113649891|dbj|BAF30403.1| Os12g0638900 [Oryza sativa Japonica Group]
gi|125580213|gb|EAZ21359.1| hypothetical protein OsJ_37016 [Oryza sativa Japonica Group]
Length = 859
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 87/317 (27%), Positives = 154/317 (48%), Gaps = 7/317 (2%)
Query: 70 LKQLKKWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAP 129
LK L + +WL+ Q + + + +I G+ F K+L MN P
Sbjct: 340 LKLLHDHTIALGFFQWLKRQPGFKHDGHSYTTMIGILGQARQFGTMRKLLDEMNSVHCKP 399
Query: 130 SVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVF 189
+VV++ ++ AYGR + A +F MQ +G P +TY ++ + + + A +++
Sbjct: 400 TVVTYNRIIHAYGRANYLREAVKVFEEMQKAGYEPDRVTYCTLIDIHAKGGYLEFAMDLY 459
Query: 190 MTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFE 249
+ ++ L PD + M+ K G A KLF M E G + VTYN +++ +
Sbjct: 460 TRM---QEVGLSPDTFTYSAMVNCLGKGGHLAAAYKLFCEMVENGCTPNLVTYNIMIALQ 516
Query: 250 T---NYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTH 306
NY+ V K+Y MQ AG +PD ++Y++++ G +EA AVF EM P
Sbjct: 517 AKARNYENVVKLYKDMQVAGFRPDKITYSIVMEVLGHCGHLDEAEAVFIEMRHDWA-PDE 575
Query: 307 KAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRR 366
Y +L+D + +G VD+A + M +D P++ + ++LSA++ + + A +
Sbjct: 576 PVYGLLVDLWGKAGNVDKALGWYHAMLQDGLQPNVPTCNSLLSAFLKINRFQDAYSVLQN 635
Query: 367 LKQDGFVPNVITYGTLI 383
+ G VP++ TY L+
Sbjct: 636 MLAQGLVPSLQTYTLLL 652
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 75/291 (25%), Positives = 147/291 (50%), Gaps = 7/291 (2%)
Query: 133 SHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTL 192
S+T ++ G+ ++ + M S +P+ +TY I+ + AN +EA +VF +
Sbjct: 368 SYTTMIGILGQARQFGTMRKLLDEMNSVHCKPTVVTYNRIIHAYGRANYLREAVKVFEEM 427
Query: 193 LDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNY 252
+K+ +PD+ + +I ++ K G E A L+ M E G+ T TY+++++
Sbjct: 428 ---QKAGYEPDRVTYCTLIDIHAKGGYLEFAMDLYTRMQEVGLSPDTFTYSAMVNCLGKG 484
Query: 253 KEVS---KIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAY 309
++ K++ +M G P++V+Y ++I KAR E + ++++M AG RP Y
Sbjct: 485 GHLAAAYKLFCEMVENGCTPNLVTYNIMIALQAKARNYENVVKLYKDMQVAGFRPDKITY 544
Query: 310 NILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQ 369
+I+++ G +D+A VF MR D +PD Y ++ + A +++ A ++ + Q
Sbjct: 545 SIVMEVLGHCGHLDEAEAVFIEMRHDW-APDEPVYGLLVDLWGKAGNVDKALGWYHAMLQ 603
Query: 370 DGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDA 420
DG PNV T +L+ + K+N + + M G+ P+ +T ++
Sbjct: 604 DGLQPNVPTCNSLLSAFLKINRFQDAYSVLQNMLAQGLVPSLQTYTLLLSC 654
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 66/229 (28%), Positives = 114/229 (49%), Gaps = 1/229 (0%)
Query: 237 QSTVTYNSLMSFETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEE 296
S T ++ + + K+ D+M +P VV+Y +I+AYG+A EA+ VFEE
Sbjct: 367 HSYTTMIGILGQARQFGTMRKLLDEMNSVHCKPTVVTYNRIIHAYGRANYLREAVKVFEE 426
Query: 297 MLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASD 356
M AG P Y L+D A G ++ A ++ M+ SPD +Y+ M++
Sbjct: 427 MQKAGYEPDRVTYCTLIDIHAKGGYLEFAMDLYTRMQEVGLSPDTFTYSAMVNCLGKGGH 486
Query: 357 MEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTT 416
+ A K F + ++G PN++TY +I AK N E ++++Y M+V G +P++ ++
Sbjct: 487 LAAAYKLFCEMVENGCTPNLVTYNIMIALQAKARNYENVVKLYKDMQVAGFRPDKITYSI 546
Query: 417 IMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEA 465
+M+ G D A + EM + PD+ +L+ L A ++A
Sbjct: 547 VMEVLGHCGHLDEAEAVFIEMRH-DWAPDEPVYGLLVDLWGKAGNVDKA 594
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 80/313 (25%), Positives = 145/313 (46%), Gaps = 10/313 (3%)
Query: 168 TYQIILKLFVEANKFKEAEEVFMTLLDEEKS-PLKPDQKMFHMMIYMYKKAGGYEKARKL 226
+Y ++ + +A +F + LLDE S KP ++ +I+ Y +A +A K+
Sbjct: 368 SYTTMIGILGQARQFGTMRK----LLDEMNSVHCKPTVVTYNRIIHAYGRANYLREAVKV 423
Query: 227 FALMAERGVQQSTVTYNSLMSFET--NYKEVS-KIYDQMQRAGLQPDVVSYALLINAYGK 283
F M + G + VTY +L+ Y E + +Y +MQ GL PD +Y+ ++N GK
Sbjct: 424 FEEMQKAGYEPDRVTYCTLIDIHAKGGYLEFAMDLYTRMQEVGLSPDTFTYSAMVNCLGK 483
Query: 284 ARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICS 343
A +F EM++ G P YNI++ A + + ++K M+ PD +
Sbjct: 484 GGHLAAAYKLFCEMVENGCTPNLVTYNIMIALQAKARNYENVVKLYKDMQVAGFRPDKIT 543
Query: 344 YTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMR 403
Y+ ++ + ++ AE F ++ D + P+ YG L+ + K N++K + Y M
Sbjct: 544 YSIVMEVLGHCGHLDEAEAVFIEMRHD-WAPDEPVYGLLVDLWGKAGNVDKALGWYHAML 602
Query: 404 VNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTAD-ER 462
+G++PN +++ A+ K F A + M + G P + +LLS A +
Sbjct: 603 QDGLQPNVPTCNSLLSAFLKINRFQDAYSVLQNMLAQGLVPSLQTYTLLLSCCTEAQAQM 662
Query: 463 NEANELLGNFNHP 475
+L+ HP
Sbjct: 663 GLCCQLMAITGHP 675
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 50/212 (23%), Positives = 102/212 (48%)
Query: 263 QRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMV 322
++ G + D SY +I G+AR+ + +EM +PT YN ++ A+ + +
Sbjct: 358 RQPGFKHDGHSYTTMIGILGQARQFGTMRKLLDEMNSVHCKPTVVTYNRIIHAYGRANYL 417
Query: 323 DQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTL 382
+A VF+ M++ PD +Y T++ + +E A + R+++ G P+ TY +
Sbjct: 418 REAVKVFEEMQKAGYEPDRVTYCTLIDIHAKGGYLEFAMDLYTRMQEVGLSPDTFTYSAM 477
Query: 383 IKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGF 442
+ K +L +++ +M NG PN + ++ K +++++ V YK+M+ GF
Sbjct: 478 VNCLGKGGHLAAAYKLFCEMVENGCTPNLVTYNIMIALQAKARNYENVVKLYKDMQVAGF 537
Query: 443 PPDQKAKNILLSLAKTADERNEANELLGNFNH 474
PD+ +I++ + +EA + H
Sbjct: 538 RPDKITYSIVMEVLGHCGHLDEAEAVFIEMRH 569
Score = 47.8 bits (112), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 48/88 (54%)
Query: 92 WDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAE 151
W +E + +L+ +GK G+ +KA M + G P+V + +L+ A+ + R+++A
Sbjct: 571 WAPDEPVYGLLVDLWGKAGNVDKALGWYHAMLQDGLQPNVPTCNSLLSAFLKINRFQDAY 630
Query: 152 AIFRRMQSSGPRPSALTYQIILKLFVEA 179
++ + M + G PS TY ++L EA
Sbjct: 631 SVLQNMLAQGLVPSLQTYTLLLSCCTEA 658
>gi|302775073|ref|XP_002970953.1| hypothetical protein SELMODRAFT_94034 [Selaginella moellendorffii]
gi|300161664|gb|EFJ28279.1| hypothetical protein SELMODRAFT_94034 [Selaginella moellendorffii]
Length = 577
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 101/392 (25%), Positives = 179/392 (45%), Gaps = 7/392 (1%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
L+ K G +A +L + G P VV++T+L++ G+ R A +F+ M G
Sbjct: 27 LLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMALRG 86
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
+ Y +++ ++ K +A V+ T+ PD MI KAG
Sbjct: 87 LALDTVCYTALIRELLQTGKIPQASSVYKTMTSH---GCVPDVVTLSTMIDGLSKAGRIG 143
Query: 222 KARKLFALMAERGVQQSTVTYNSLMSFETNYKEVS---KIYDQMQRAGLQPDVVSYALLI 278
A ++F M RG+ + V Y++L+ +++ ++ QM++A PD ++Y +LI
Sbjct: 144 AAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNVLI 203
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQA-RTVFKCMRRDRC 337
+ K+ E A A F+EML+AG +P YNIL+ F +G D A ++ + + C
Sbjct: 204 DGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAASHSLAQETTINGC 263
Query: 338 SPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMME 397
+ DI +YT ++ +E A ++ +G P + TY L+ G K+ LE+ ++
Sbjct: 264 TIDIHTYTAIVDWLAKNKKIEEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAID 323
Query: 398 IYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAK 457
+ K+ NG P+ +T+++D GK K A +KEM G D L+
Sbjct: 324 LLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMALRGLALDTVCYTALIRELL 383
Query: 458 TADERNEANELLGNFNHPNNEPGINGLSISVD 489
+ +A+ + P + LS +D
Sbjct: 384 QTGKIPQASSVYKTMTSHGCVPDVVTLSTMID 415
Score = 144 bits (364), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 105/438 (23%), Positives = 193/438 (44%), Gaps = 10/438 (2%)
Query: 22 AADEAGKKNWRRLMNQIEEVGSAVAVLRSERTRGQPLPKDLVLGTLV-RLKQLKKWNVVS 80
A D R + Q ++ A +V ++ + G +P + L T++ L + +
Sbjct: 88 ALDTVCYTALIRELLQTGKIPQASSVYKTMTSHG-CVPDVVTLSTMIDGLSKAGRIGAAV 146
Query: 81 EVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEA 140
+ + + + NE+ + LI K + A ++L+ M K P +++ L++
Sbjct: 147 RIFKSMEARGLAP-NEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNVLIDG 205
Query: 141 YGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEK-SP 199
+ G + A A F M +G +P TY I++ F +A A +L E +
Sbjct: 206 LCKSGDVEAARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAASH---SLAQETTING 262
Query: 200 LKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSKIY 259
D + ++ K E+A L + G + TYN+L++ + +
Sbjct: 263 CTIDIHTYTAIVDWLAKNKKIEEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAI 322
Query: 260 DQMQRA---GLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAF 316
D +++ G PDVV+Y LI+ GK +R EA +F+EM G+ Y L+
Sbjct: 323 DLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMALRGLALDTVCYTALIREL 382
Query: 317 AISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNV 376
+G + QA +V+K M C PD+ + +TM+ A + A + F+ ++ G PN
Sbjct: 383 LQTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNE 442
Query: 377 ITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKE 436
+ Y LI G K ++ +E+ +M+ P+ + ++D K+ D ++A ++ E
Sbjct: 443 VVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAARAFFDE 502
Query: 437 MESCGFPPDQKAKNILLS 454
M G PD NIL+S
Sbjct: 503 MLEAGCKPDVYTYNILIS 520
Score = 139 bits (349), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 99/444 (22%), Positives = 192/444 (43%), Gaps = 45/444 (10%)
Query: 35 MNQIEEVGSAVAVLRSERTRGQPLPKDLVLGTLVR-LKQLKKWNVVSEVLEWLRIQSWWD 93
+++ +G+AV + +S RG P ++V L+ L + +K + E+L ++ +++
Sbjct: 136 LSKAGRIGAAVRIFKSMEARGLA-PNEVVYSALIHGLCKARKMDCALEMLAQMK-KAFCT 193
Query: 94 FNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGG-------- 145
+ + + +LI K GD A M + G P V ++ L+ + + G
Sbjct: 194 PDTITYNVLIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAASHS 253
Query: 146 ----------------------------RYKNAEAIFRRMQSSGPRPSALTYQIILKLFV 177
+ + A A+ ++ ++G P+ TY +L
Sbjct: 254 LAQETTINGCTIDIHTYTAIVDWLAKNKKIEEAVALMEKITANGCTPTIATYNALLNGLC 313
Query: 178 EANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQ 237
+ + +EA ++ ++D + PD + +I K +A KLF MA RG+
Sbjct: 314 KMGRLEEAIDLLRKIVD---NGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMALRGLAL 370
Query: 238 STVTYNSLMS--FETN-YKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVF 294
TV Y +L+ +T + S +Y M G PDVV+ + +I+ KA R A+ +F
Sbjct: 371 DTVCYTALIRELLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIF 430
Query: 295 EEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNA 354
+ M G+ P Y+ L+ + +D A + M++ C+PD +Y ++ +
Sbjct: 431 KSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKS 490
Query: 355 SDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIF 414
D+E A FF + + G P+V TY LI G+ K N + ++D M + N +
Sbjct: 491 GDVEAARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAACGVFDDMSSSRCSANVVTY 550
Query: 415 TTIMDAYGKNKDFDSAVVWYKEME 438
++ K + A ++++ M+
Sbjct: 551 GALISGLCKRRQLTKASLYFQHMK 574
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 100/409 (24%), Positives = 181/409 (44%), Gaps = 14/409 (3%)
Query: 94 FNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAI 153
+ + + LI + G +A V M G P VV+ + +++ + GR A I
Sbjct: 89 LDTVCYTALIRELLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDGLSKAGRIGAAVRI 148
Query: 154 FRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYM 213
F+ M++ G P+ + Y ++ +A K A E+ L +K+ PD ++++I
Sbjct: 149 FKSMEARGLAPNEVVYSALIHGLCKARKMDCALEM---LAQMKKAFCTPDTITYNVLIDG 205
Query: 214 YKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSF---ETNYKEVS-KIYDQMQRAGLQP 269
K+G E AR F M E G + TYN L+S N S + + G
Sbjct: 206 LCKSGDVEAARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAASHSLAQETTINGCTI 265
Query: 270 DVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVF 329
D+ +Y +++ K ++ EEA+A+ E++ G PT YN LL+ G +++A +
Sbjct: 266 DIHTYTAIVDWLAKNKKIEEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLL 325
Query: 330 KCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKV 389
+ + + C+PD+ +YT+++ A K F+ + G + + Y LI+ +
Sbjct: 326 RKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMALRGLALDTVCYTALIRELLQT 385
Query: 390 NNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAK 449
+ + +Y M +G P+ +T++D K +AV +K ME+ G P++
Sbjct: 386 GKIPQASSVYKTMTSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVY 445
Query: 450 NILLSLAKTADERNEANELLGNFNHPNNEPG-------INGLSISVDEE 491
+ L+ A + + A E+L P I+GL S D E
Sbjct: 446 SALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVE 494
Score = 121 bits (304), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 74/271 (27%), Positives = 126/271 (46%), Gaps = 9/271 (3%)
Query: 221 EKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSKIYDQMQRA---GLQPDVVSYALL 277
E+A L + G + TYN+L++ + + D +++ G PDVV+Y L
Sbjct: 3 EEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSL 62
Query: 278 INAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRC 337
I+ GK +R EA +F+EM G+ Y L+ +G + QA +V+K M C
Sbjct: 63 IDGLGKEKRSFEAYKLFKEMALRGLALDTVCYTALIRELLQTGKIPQASSVYKTMTSHGC 122
Query: 338 SPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMME 397
PD+ + +TM+ A + A + F+ ++ G PN + Y LI G K ++ +E
Sbjct: 123 VPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALE 182
Query: 398 IYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAK 457
+ +M+ P+ + ++D K+ D ++A ++ EM G PD NIL+S
Sbjct: 183 MLAQMKKAFCTPDTITYNVLIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILISGFC 242
Query: 458 TADERNEANELLGNFNHPNNEPGINGLSISV 488
A + A+ L E ING +I +
Sbjct: 243 KAGNTDAASHSLA------QETTINGCTIDI 267
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 95/211 (45%), Gaps = 7/211 (3%)
Query: 288 EEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTM 347
EEA+A+ E++ G PT YN LL+ G +++A + + + + C+PD+ +YT++
Sbjct: 3 EEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSL 62
Query: 348 LSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGI 407
+ A K F+ + G + + Y LI+ + + + +Y M +G
Sbjct: 63 IDGLGKEKRSFEAYKLFKEMALRGLALDTVCYTALIRELLQTGKIPQASSVYKTMTSHGC 122
Query: 408 KPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANE 467
P+ +T++D K +AV +K ME+ G P++ + L+ A + + A E
Sbjct: 123 VPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALE 182
Query: 468 LLGNFNHPNNEPG-------INGLSISVDEE 491
+L P I+GL S D E
Sbjct: 183 MLAQMKKAFCTPDTITYNVLIDGLCKSGDVE 213
>gi|115462947|ref|NP_001055073.1| Os05g0275000 [Oryza sativa Japonica Group]
gi|50878350|gb|AAT85125.1| unknown protein, contains pentatricopeptide (PPR) repeat, PF01535
[Oryza sativa Japonica Group]
gi|113578624|dbj|BAF16987.1| Os05g0275000 [Oryza sativa Japonica Group]
gi|215695094|dbj|BAG90285.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 793
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 98/446 (21%), Positives = 197/446 (44%), Gaps = 42/446 (9%)
Query: 74 KKWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVS 133
+ W + +LE +R + + ++ +I A G+ G ++A + +G+ P VV+
Sbjct: 230 RSWPRIVALLEEMR-AAGVEPDDFTASTVIAACGRDGLLDQAVAFFEDLKARGHVPCVVT 288
Query: 134 HTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLL 193
+ AL++ +G+ G Y A + + M+ SG +P A+TY + + A F+EA + T+
Sbjct: 289 YNALLQVFGKAGNYTEALRVLKEMEDSGCQPDAVTYNELAGTYARAGFFEEAAKCLDTMT 348
Query: 194 DEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYN---SLMSFET 250
+ L P+ ++ ++ Y G ++A LF M + G + TYN ++ ++
Sbjct: 349 SKG---LLPNTFTYNTVMTAYANVGRVDEALALFDRMKKNGYVPNVNTYNLIFGMLGKKS 405
Query: 251 NYKEVSKIYDQMQRAGLQPDVVS-----------------------------------YA 275
+ + ++ ++M R+G P+ V+ Y
Sbjct: 406 RFTAMLEMLEEMSRSGCTPNRVTWNTMLAVCGKRGMEDYVTRVLNGMKSCGVELSRDTYN 465
Query: 276 LLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRD 335
LI+AYG+ A +++EM+ +G P YN LL+ + G A+++ M ++
Sbjct: 466 TLISAYGRCGSRTYAFKMYDEMISSGFTPCLTTYNALLNVLSRQGDWSTAQSIVSKMLKN 525
Query: 336 RCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKM 395
P+ SY+ +L Y + G E + + P+ + TL+ K LE +
Sbjct: 526 GFKPNDQSYSLLLQCYAKGGNAAGIESIEKEVYVGTIFPSWVILRTLVIANFKCRRLEGV 585
Query: 396 MEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSL 455
+ + +++ G KP+ IF +++ Y KN + A + ++ G PD N L+ +
Sbjct: 586 EKAFQEVKAQGYKPDLVIFNSMLAMYAKNGLYSKATEMFDSIKQSGLSPDLITYNSLMDM 645
Query: 456 AKTADERNEANELLGNFNHPNNEPGI 481
++E EA ++L +P +
Sbjct: 646 YAKSNESWEAEKILKQLKSSQVKPDV 671
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 105/425 (24%), Positives = 199/425 (46%), Gaps = 15/425 (3%)
Query: 64 LGTLVRLKQLK-KWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFM 122
L +L++ +L W +L W + D ++ M++ A G++G + +L M
Sbjct: 113 LPSLLKALELSGHWEWALALLRWASDEGAADAAALE--MVVRALGREGQHDVVCDLLDEM 170
Query: 123 N-KKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANK 181
G V ++T ++ A R GRY+ A +F ++ G P+ +TY ++L ++ +
Sbjct: 171 PLPPGSRLDVRAYTTVLHALSRAGRYERALQLFAELRRQGVVPTIVTYNVVLDVY---GR 227
Query: 182 FKEAEEVFMTLLDEEKSP-LKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTV 240
+ + LL+E ++ ++PD +I + G ++A F + RG V
Sbjct: 228 MGRSWPRIVALLEEMRAAGVEPDDFTASTVIAACGRDGLLDQAVAFFEDLKARGHVPCVV 287
Query: 241 TYNSLMSF---ETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEM 297
TYN+L+ NY E ++ +M+ +G QPD V+Y L Y +A EEA + M
Sbjct: 288 TYNALLQVFGKAGNYTEALRVLKEMEDSGCQPDAVTYNELAGTYARAGFFEEAAKCLDTM 347
Query: 298 LDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDM 357
G+ P YN ++ A+A G VD+A +F M+++ P++ +Y + S
Sbjct: 348 TSKGLLPNTFTYNTVMTAYANVGRVDEALALFDRMKKNGYVPNVNTYNLIFGMLGKKSRF 407
Query: 358 EGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTI 417
+ + + G PN +T+ T++ K + + + + M+ G++ ++ + T+
Sbjct: 408 TAMLEMLEEMSRSGCTPNRVTWNTMLAVCGKRGMEDYVTRVLNGMKSCGVELSRDTYNTL 467
Query: 418 MDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLS-LAKTAD---ERNEANELLGNFN 473
+ AYG+ A Y EM S GF P N LL+ L++ D ++ +++L N
Sbjct: 468 ISAYGRCGSRTYAFKMYDEMISSGFTPCLTTYNALLNVLSRQGDWSTAQSIVSKMLKNGF 527
Query: 474 HPNNE 478
PN++
Sbjct: 528 KPNDQ 532
Score = 132 bits (331), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 96/395 (24%), Positives = 189/395 (47%), Gaps = 10/395 (2%)
Query: 61 DLVLGTLVRLKQLKKWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLS 120
+L+ G L + ++ + E+LE + +S N + + ++ GK+G + +VL+
Sbjct: 395 NLIFGML---GKKSRFTAMLEMLEEMS-RSGCTPNRVTWNTMLAVCGKRGMEDYVTRVLN 450
Query: 121 FMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEAN 180
M G S ++ L+ AYGR G A ++ M SSG P TY +L +
Sbjct: 451 GMKSCGVELSRDTYNTLISAYGRCGSRTYAFKMYDEMISSGFTPCLTTYNALLNVLSRQG 510
Query: 181 KFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTV 240
+ A+ + +L K+ KP+ + + +++ Y K G + + + S V
Sbjct: 511 DWSTAQSIVSKML---KNGFKPNDQSYSLLLQCYAKGGNAAGIESIEKEVYVGTIFPSWV 567
Query: 241 TYNSLM--SFETNYKE-VSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEM 297
+L+ +F+ E V K + +++ G +PD+V + ++ Y K +A +F+ +
Sbjct: 568 ILRTLVIANFKCRRLEGVEKAFQEVKAQGYKPDLVIFNSMLAMYAKNGLYSKATEMFDSI 627
Query: 298 LDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDM 357
+G+ P YN L+D +A S +A + K ++ + PD+ SY T+++ + +
Sbjct: 628 KQSGLSPDLITYNSLMDMYAKSNESWEAEKILKQLKSSQVKPDVVSYNTVINGFCKQGLI 687
Query: 358 EGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTI 417
+ A++ + DG P V+TY TL+ GYA + + E+ + M + +KP + + +
Sbjct: 688 KEAQRILSEMIADGMAPCVVTYHTLVGGYASLEMFNEAREVVNYMIHHNLKPMELTYRRV 747
Query: 418 MDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNIL 452
+D+Y K K +D A + E+ DQK +++L
Sbjct: 748 VDSYCKAKRYDEAREFLSEISDTDQNFDQKLQHML 782
Score = 125 bits (315), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 89/399 (22%), Positives = 166/399 (41%), Gaps = 70/399 (17%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
L Y + G F +A K L M KG P+ ++ +M AY GR A A+F RM+ +G
Sbjct: 327 LAGTYARAGFFEEAAKCLDTMTSKGLLPNTFTYNTVMTAYANVGRVDEALALFDRMKKNG 386
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSP---------------------- 199
P+ TY +I + + ++F E+ + +P
Sbjct: 387 YVPNVNTYNLIFGMLGKKSRFTAMLEMLEEMSRSGCTPNRVTWNTMLAVCGKRGMEDYVT 446
Query: 200 ----------LKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLM--- 246
++ + ++ +I Y + G A K++ M G TYN+L+
Sbjct: 447 RVLNGMKSCGVELSRDTYNTLISAYGRCGSRTYAFKMYDEMISSGFTPCLTTYNALLNVL 506
Query: 247 SFETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYG------------------------ 282
S + ++ I +M + G +P+ SY+LL+ Y
Sbjct: 507 SRQGDWSTAQSIVSKMLKNGFKPNDQSYSLLLQCYAKGGNAAGIESIEKEVYVGTIFPSW 566
Query: 283 -----------KARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKC 331
K RR E F+E+ G +P +N +L +A +G+ +A +F
Sbjct: 567 VILRTLVIANFKCRRLEGVEKAFQEVKAQGYKPDLVIFNSMLAMYAKNGLYSKATEMFDS 626
Query: 332 MRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNN 391
+++ SPD+ +Y +++ Y +++ AEK ++LK P+V++Y T+I G+ K
Sbjct: 627 IKQSGLSPDLITYNSLMDMYAKSNESWEAEKILKQLKSSQVKPDVVSYNTVINGFCKQGL 686
Query: 392 LEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSA 430
+++ I +M +G+ P + T++ Y + F+ A
Sbjct: 687 IKEAQRILSEMIADGMAPCVVTYHTLVGGYASLEMFNEA 725
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 61/236 (25%), Positives = 106/236 (44%), Gaps = 2/236 (0%)
Query: 249 ETNYKEVSKIYDQMQ-RAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHK 307
E + V + D+M G + DV +Y +++A +A R E AL +F E+ GV PT
Sbjct: 157 EGQHDVVCDLLDEMPLPPGSRLDVRAYTTVLHALSRAGRYERALQLFAELRRQGVVPTIV 216
Query: 308 AYNILLDAFAISGMV-DQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRR 366
YN++LD + G + + + MR PD + +T+++A ++ A FF
Sbjct: 217 TYNVVLDVYGRMGRSWPRIVALLEEMRAAGVEPDDFTASTVIAACGRDGLLDQAVAFFED 276
Query: 367 LKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKD 426
LK G VP V+TY L++ + K N + + + +M +G +P+ + + Y +
Sbjct: 277 LKARGHVPCVVTYNALLQVFGKAGNYTEALRVLKEMEDSGCQPDAVTYNELAGTYARAGF 336
Query: 427 FDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGIN 482
F+ A M S G P+ N +++ +EA L P +N
Sbjct: 337 FEEAAKCLDTMTSKGLLPNTFTYNTVMTAYANVGRVDEALALFDRMKKNGYVPNVN 392
>gi|125551633|gb|EAY97342.1| hypothetical protein OsI_19265 [Oryza sativa Indica Group]
Length = 793
Score = 146 bits (368), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 98/446 (21%), Positives = 197/446 (44%), Gaps = 42/446 (9%)
Query: 74 KKWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVS 133
+ W + +LE +R + + ++ +I A G+ G ++A + +G+ P VV+
Sbjct: 230 RSWPRIVALLEEMR-AAGVEPDDFTASTVIAACGRDGLLDQAVAFFEDLKARGHVPCVVT 288
Query: 134 HTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLL 193
+ AL++ +G+ G Y A + + M+ SG +P A+TY + + A F+EA + T+
Sbjct: 289 YNALLQVFGKAGNYTEALRVLKEMEDSGCQPDAVTYNELAGTYARAGFFEEAAKCLDTMT 348
Query: 194 DEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYN---SLMSFET 250
+ L P+ ++ ++ Y G ++A LF M + G + TYN ++ ++
Sbjct: 349 SKG---LLPNTFTYNTVMTAYANVGRVDEALALFDRMKKNGYVPNVNTYNLIFGMLGKKS 405
Query: 251 NYKEVSKIYDQMQRAGLQPDVVS-----------------------------------YA 275
+ + ++ ++M R+G P+ V+ Y
Sbjct: 406 RFTAMLEMLEEMSRSGCTPNRVTWNTMLAVCGKRGMEDYVTRVLNGMKSCGVELSRDTYN 465
Query: 276 LLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRD 335
LI+AYG+ A +++EM+ +G P YN LL+ + G A+++ M ++
Sbjct: 466 TLISAYGRCGSRTYAFKMYDEMISSGFTPCLTTYNALLNVLSRQGDWSTAQSIVSKMLKN 525
Query: 336 RCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKM 395
P+ SY+ +L Y + G E + + P+ + TL+ K LE +
Sbjct: 526 GFKPNDQSYSLLLQCYAKGGNAAGIESIEKEVYVGTIFPSWVILRTLVIANFKCRRLEGV 585
Query: 396 MEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSL 455
+ + +++ G KP+ IF +++ Y KN + A + ++ G PD N L+ +
Sbjct: 586 EKAFQEVKAQGYKPDLVIFNSMLAMYAKNGLYSKATEMFDSIKQSGLSPDLITYNSLMDM 645
Query: 456 AKTADERNEANELLGNFNHPNNEPGI 481
++E EA ++L +P +
Sbjct: 646 YAKSNESWEAEKILKQLKSSQVKPDV 671
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 105/425 (24%), Positives = 199/425 (46%), Gaps = 15/425 (3%)
Query: 64 LGTLVRLKQLK-KWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFM 122
L +L++ +L W +L W + D ++ M++ A G++G + +L M
Sbjct: 113 LPSLLKALELSGHWEWALALLRWASDEGAADAAALE--MVVRALGREGQHDVVCDLLDEM 170
Query: 123 N-KKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANK 181
G V ++T ++ A R GRY+ A +F ++ G P+ +TY ++L ++ +
Sbjct: 171 PLPPGSRLDVRAYTTVLHALSRAGRYERALQLFAELRRQGVVPTIVTYNVVLDVY---GR 227
Query: 182 FKEAEEVFMTLLDEEKSP-LKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTV 240
+ + LL+E ++ ++PD +I + G ++A F + RG V
Sbjct: 228 MGRSWPRIVALLEEMRAAGVEPDDFTASTVIAACGRDGLLDQAVAFFEDLKARGHVPCVV 287
Query: 241 TYNSLMSF---ETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEM 297
TYN+L+ NY E ++ +M+ +G QPD V+Y L Y +A EEA + M
Sbjct: 288 TYNALLQVFGKAGNYTEALRVLKEMEDSGCQPDAVTYNELAGTYARAGFFEEAAKCLDTM 347
Query: 298 LDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDM 357
G+ P YN ++ A+A G VD+A +F M+++ P++ +Y + S
Sbjct: 348 TSKGLLPNTFTYNTVMTAYANVGRVDEALALFDRMKKNGYVPNVNTYNLIFGMLGKKSRF 407
Query: 358 EGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTI 417
+ + + G PN +T+ T++ K + + + + M+ G++ ++ + T+
Sbjct: 408 TAMLEMLEEMSRSGCTPNRVTWNTMLAVCGKRGMEDYVTRVLNGMKSCGVELSRDTYNTL 467
Query: 418 MDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLS-LAKTAD---ERNEANELLGNFN 473
+ AYG+ A Y EM S GF P N LL+ L++ D ++ +++L N
Sbjct: 468 ISAYGRCGSRTYAFKMYDEMISSGFTPCLTTYNALLNVLSRQGDWSTAQSIVSKMLKNGF 527
Query: 474 HPNNE 478
PN++
Sbjct: 528 KPNDQ 532
Score = 132 bits (331), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 96/395 (24%), Positives = 189/395 (47%), Gaps = 10/395 (2%)
Query: 61 DLVLGTLVRLKQLKKWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLS 120
+L+ G L + ++ + E+LE + +S N + + ++ GK+G + +VL+
Sbjct: 395 NLIFGML---GKKSRFTAMLEMLEEMS-RSGCTPNRVTWNTMLAVCGKRGMEDYVTRVLN 450
Query: 121 FMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEAN 180
M G S ++ L+ AYGR G A ++ M SSG P TY +L +
Sbjct: 451 GMKSCGVELSRDTYNTLISAYGRCGSRTYAFKMYDEMISSGFTPCLTTYNALLNVLSRQG 510
Query: 181 KFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTV 240
+ A+ + +L K+ KP+ + + +++ Y K G + + + S V
Sbjct: 511 DWSTAQSIVSKML---KNGFKPNDQSYSLLLQCYAKGGNAAGIESIEKEVYVGTIFPSWV 567
Query: 241 TYNSLM--SFETNYKE-VSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEM 297
+L+ +F+ E V K + +++ G +PD+V + ++ Y K +A +F+ +
Sbjct: 568 ILRTLVIANFKCRRLEGVEKAFQEVKAQGYKPDLVIFNSMLAMYAKNGLYSKATEMFDSI 627
Query: 298 LDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDM 357
+G+ P YN L+D +A S +A + K ++ + PD+ SY T+++ + +
Sbjct: 628 KQSGLSPDLITYNSLMDMYAKSNESWEAEKILKQLKSSQVKPDVVSYNTVINGFCKQGLI 687
Query: 358 EGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTI 417
+ A++ + DG P V+TY TL+ GYA + + E+ + M + +KP + + +
Sbjct: 688 KEAQRILSEMIADGMAPCVVTYHTLVGGYASLEMFNEAREVVNYMIHHNLKPMELTYRRV 747
Query: 418 MDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNIL 452
+D+Y K K +D A + E+ DQK +++L
Sbjct: 748 VDSYCKAKRYDEAREFLSEISDTDQNFDQKLQHML 782
Score = 125 bits (315), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 89/399 (22%), Positives = 166/399 (41%), Gaps = 70/399 (17%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
L Y + G F +A K L M KG P+ ++ +M AY GR A A+F RM+ +G
Sbjct: 327 LAGTYARAGFFEEAAKCLDTMTSKGLLPNTFTYNTVMTAYANVGRVDEALALFDRMKKNG 386
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSP---------------------- 199
P+ TY +I + + ++F E+ + +P
Sbjct: 387 YVPNVNTYNLIFGMLGKKSRFTAMLEMLEEMSRSGCTPNRVTWNTMLAVCGKRGMEDYVT 446
Query: 200 ----------LKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLM--- 246
++ + ++ +I Y + G A K++ M G TYN+L+
Sbjct: 447 RVLNGMKSCGVELSRDTYNTLISAYGRCGSRTYAFKMYDEMISSGFTPCLTTYNALLNVL 506
Query: 247 SFETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYG------------------------ 282
S + ++ I +M + G +P+ SY+LL+ Y
Sbjct: 507 SRQGDWSTAQSIVSKMLKNGFKPNDQSYSLLLQCYAKGGNAAGIESIEKEVYVGTIFPSW 566
Query: 283 -----------KARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKC 331
K RR E F+E+ G +P +N +L +A +G+ +A +F
Sbjct: 567 VILRTLVIANFKCRRLEGVEKAFQEVKAQGYKPDLVIFNSMLAMYAKNGLYSKATEMFDS 626
Query: 332 MRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNN 391
+++ SPD+ +Y +++ Y +++ AEK ++LK P+V++Y T+I G+ K
Sbjct: 627 IKQSGLSPDLITYNSLMDMYAKSNESWEAEKILKQLKSSQVKPDVVSYNTVINGFCKQGL 686
Query: 392 LEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSA 430
+++ I +M +G+ P + T++ Y + F+ A
Sbjct: 687 IKEAQRILSEMIADGMAPCVVTYHTLVGGYASLEMFNEA 725
Score = 89.0 bits (219), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 61/236 (25%), Positives = 106/236 (44%), Gaps = 2/236 (0%)
Query: 249 ETNYKEVSKIYDQMQ-RAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHK 307
E + V + D+M G + DV +Y +++A +A R E AL +F E+ GV PT
Sbjct: 157 EGQHDVVCDLLDEMPLPPGSRLDVRAYTTVLHALSRAGRYERALQLFAELRRQGVVPTIV 216
Query: 308 AYNILLDAFAISGMV-DQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRR 366
YN++LD + G + + + MR PD + +T+++A ++ A FF
Sbjct: 217 TYNVVLDVYGRMGRSWPRIVALLEEMRAAGVEPDDFTASTVIAACGRDGLLDQAVAFFED 276
Query: 367 LKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKD 426
LK G VP V+TY L++ + K N + + + +M +G +P+ + + Y +
Sbjct: 277 LKARGHVPCVVTYNALLQVFGKAGNYTEALRVLKEMEDSGCQPDAVTYNELAGTYARAGF 336
Query: 427 FDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGIN 482
F+ A M S G P+ N +++ +EA L P +N
Sbjct: 337 FEEAAKCLDTMTSKGLLPNTFTYNTVMTAYANVGRVDEALALFDRMKKNGYVPNVN 392
>gi|414874052|tpg|DAA52609.1| TPA: hypothetical protein ZEAMMB73_367214 [Zea mays]
Length = 716
Score = 146 bits (368), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 92/355 (25%), Positives = 169/355 (47%), Gaps = 6/355 (1%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
++ A K KAE L M KG P ++ L+ Y G++K A +F+ M+
Sbjct: 264 VVHALCKARAMGKAEAFLRQMVNKGVLPDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHS 323
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
P +T +++ + K KEA +VF T+ + ++P D + +M+ Y G
Sbjct: 324 ILPDVVTLNMLMGSLCKYGKIKEARDVFDTMAMKGQNP---DVFSYKIMLNGYATKGCLV 380
Query: 222 KARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSK---IYDQMQRAGLQPDVVSYALLI 278
LF LM G+ T++ L+ N + K I+++M+ G++PDVV+Y +I
Sbjct: 381 DMTDLFDLMLGDGIAPDIYTFSVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYTTVI 440
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCS 338
A + + ++A+ F +M+D GV P AY+ L+ F G + +A+ + + +
Sbjct: 441 AALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKELILEIMNNGMR 500
Query: 339 PDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEI 398
DI ++++++ + A+ F G P+ + Y L+ GY V +EK + +
Sbjct: 501 LDIVFFSSIINNLCKLGRIMDAQNIFDLTVNVGQHPDAVVYSMLMDGYCLVGKMEKALRV 560
Query: 399 YDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILL 453
+D M GI+PN ++ T+++ Y K D + ++EM G P NI++
Sbjct: 561 FDAMVSAGIEPNVVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIII 615
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 99/364 (27%), Positives = 170/364 (46%), Gaps = 8/364 (2%)
Query: 113 NKAEKVLSFMN---KKGYAPSVVSHTALMEAYGRGGRYKNA-EAIFRRMQSSGPRPSALT 168
++ E L+F + G ++ L++ + R A + + R G P +
Sbjct: 129 HRPELALAFFGQLLRTGLRVDIIIANHLLKGFCEAKRTDEALDILLHRTPELGCVPDVFS 188
Query: 169 YQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFA 228
Y I+LK + K +A+++ + ++ E + PD + +I + K G KA LF
Sbjct: 189 YSILLKSLCDQGKSGQADDL-LRMMAEGGAVCSPDVVAYTTVIDCFFKEGDVNKACDLFK 247
Query: 229 LMAERGVQQSTVTYNSLMSFETNYKEVSK---IYDQMQRAGLQPDVVSYALLINAYGKAR 285
M +RG+ VTY+S++ + + K QM G+ PD +Y LI Y
Sbjct: 248 EMVQRGIPPDLVTYSSVVHALCKARAMGKAEAFLRQMVNKGVLPDNWTYNNLIYGYSSTG 307
Query: 286 REEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYT 345
+ +EA+ VF+EM + P N+L+ + G + +AR VF M +PD+ SY
Sbjct: 308 QWKEAVRVFKEMRRHSILPDVVTLNMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYK 367
Query: 346 TMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVN 405
ML+ Y + F + DG P++ T+ LIK YA L+K M I+++MR +
Sbjct: 368 IMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFSVLIKAYANCGMLDKAMIIFNEMRDH 427
Query: 406 GIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEA 465
G+KP+ +TT++ A + D A+ + +M G PD+ A + L+ T +A
Sbjct: 428 GVKPDVVTYTTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKA 487
Query: 466 NELL 469
EL+
Sbjct: 488 KELI 491
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 82/314 (26%), Positives = 150/314 (47%), Gaps = 6/314 (1%)
Query: 99 FLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQ 158
F +LI AY G +KA + + M G P VV++T ++ A R G+ +A F +M
Sbjct: 401 FSVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYTTVIAALCRIGKMDDAMEKFNQMI 460
Query: 159 SSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAG 218
G P Y +++ F +A+E+ + +++ + ++ D F +I K G
Sbjct: 461 DQGVAPDKYAYHCLIQGFCTHGSLLKAKELILEIMN---NGMRLDIVFFSSIINNLCKLG 517
Query: 219 GYEKARKLFALMAERGVQQSTVTYNSLM---SFETNYKEVSKIYDQMQRAGLQPDVVSYA 275
A+ +F L G V Y+ LM ++ +++D M AG++P+VV Y
Sbjct: 518 RIMDAQNIFDLTVNVGQHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYG 577
Query: 276 LLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRD 335
L+N Y K R +E L++F EML G++P+ YNI++D ++G A+ F M
Sbjct: 578 TLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFVAGRTVPAKVKFHEMTES 637
Query: 336 RCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKM 395
+ + C+Y +L + + A F+ L+ ++IT T+I G + +E+
Sbjct: 638 GIAINKCTYNIVLRGFFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQTRRVEEA 697
Query: 396 MEIYDKMRVNGIKP 409
+++ + +G+ P
Sbjct: 698 KDLFASISRSGLVP 711
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 88/406 (21%), Positives = 175/406 (43%), Gaps = 11/406 (2%)
Query: 44 AVAVLRSERTRGQPLPKDLVLGTLVRLKQLKKWNVVSEVLEWLRIQSWWDFNE--MDFLM 101
AV V + R R LP + L L + L K+ + E + + N + +
Sbjct: 312 AVRVFKEMR-RHSILPDVVTLNML--MGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYKI 368
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
++ Y +G + M G AP + + + L++AY G A IF M+ G
Sbjct: 369 MLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFSVLIKAYANCGMLDKAMIIFNEMRDHG 428
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
+P +TY ++ K +A E F ++D+ + PD+ +H +I + G
Sbjct: 429 VKPDVVTYTTVIAALCRIGKMDDAMEKFNQMIDQG---VAPDKYAYHCLIQGFCTHGSLL 485
Query: 222 KARKLFALMAERGVQQSTVTYNSLMSFETNYKEV---SKIYDQMQRAGLQPDVVSYALLI 278
KA++L + G++ V ++S+++ + I+D G PD V Y++L+
Sbjct: 486 KAKELILEIMNNGMRLDIVFFSSIINNLCKLGRIMDAQNIFDLTVNVGQHPDAVVYSMLM 545
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCS 338
+ Y + E+AL VF+ M+ AG+ P Y L++ + G +D+ ++F+ M +
Sbjct: 546 DGYCLVGKMEKALRVFDAMVSAGIEPNVVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIK 605
Query: 339 PDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEI 398
P Y ++ A A+ F + + G N TY +++G+ K ++ + +
Sbjct: 606 PSTILYNIIIDGLFVAGRTVPAKVKFHEMTESGIAINKCTYNIVLRGFFKNRCFDEAIFL 665
Query: 399 YDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPP 444
+ ++R +K + T++ + + + A + + G P
Sbjct: 666 FKELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDLFASISRSGLVP 711
Score = 88.6 bits (218), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 61/232 (26%), Positives = 109/232 (46%), Gaps = 7/232 (3%)
Query: 233 RGVQQSTVTYNSLMSFET--NYKEVS-KIYDQMQRAGLQPDVVSYALLINAYGKARREEE 289
R + ++ TY LM T + E++ + Q+ R GL+ D++ L+ + +A+R +E
Sbjct: 109 RVLSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDIIIANHLLKGFCEAKRTDE 168
Query: 290 ALAVF-EEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRD--RCSPDICSYTT 346
AL + + G P +Y+ILL + G QA + + M CSPD+ +YTT
Sbjct: 169 ALDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPDVVAYTT 228
Query: 347 MLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNG 406
++ + D+ A F+ + Q G P+++TY +++ K + K +M G
Sbjct: 229 VIDCFFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMGKAEAFLRQMVNKG 288
Query: 407 IKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILL-SLAK 457
+ P+ + ++ Y + AV +KEM PD N+L+ SL K
Sbjct: 289 VLPDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLNMLMGSLCK 340
>gi|222630937|gb|EEE63069.1| hypothetical protein OsJ_17877 [Oryza sativa Japonica Group]
Length = 702
Score = 146 bits (368), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 98/446 (21%), Positives = 197/446 (44%), Gaps = 42/446 (9%)
Query: 74 KKWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVS 133
+ W + +LE +R + + ++ +I A G+ G ++A + +G+ P VV+
Sbjct: 139 RSWPRIVALLEEMR-AAGVEPDDFTASTVIAACGRDGLLDQAVAFFEDLKARGHVPCVVT 197
Query: 134 HTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLL 193
+ AL++ +G+ G Y A + + M+ SG +P A+TY + + A F+EA + T+
Sbjct: 198 YNALLQVFGKAGNYTEALRVLKEMEDSGCQPDAVTYNELAGTYARAGFFEEAAKCLDTMT 257
Query: 194 DEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYN---SLMSFET 250
+ L P+ ++ ++ Y G ++A LF M + G + TYN ++ ++
Sbjct: 258 SKG---LLPNTFTYNTVMTAYANVGRVDEALALFDRMKKNGYVPNVNTYNLIFGMLGKKS 314
Query: 251 NYKEVSKIYDQMQRAGLQPDVVS-----------------------------------YA 275
+ + ++ ++M R+G P+ V+ Y
Sbjct: 315 RFTAMLEMLEEMSRSGCTPNRVTWNTMLAVCGKRGMEDYVTRVLNGMKSCGVELSRDTYN 374
Query: 276 LLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRD 335
LI+AYG+ A +++EM+ +G P YN LL+ + G A+++ M ++
Sbjct: 375 TLISAYGRCGSRTYAFKMYDEMISSGFTPCLTTYNALLNVLSRQGDWSTAQSIVSKMLKN 434
Query: 336 RCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKM 395
P+ SY+ +L Y + G E + + P+ + TL+ K LE +
Sbjct: 435 GFKPNDQSYSLLLQCYAKGGNAAGIESIEKEVYVGTIFPSWVILRTLVIANFKCRRLEGV 494
Query: 396 MEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSL 455
+ + +++ G KP+ IF +++ Y KN + A + ++ G PD N L+ +
Sbjct: 495 EKAFQEVKAQGYKPDLVIFNSMLAMYAKNGLYSKATEMFDSIKQSGLSPDLITYNSLMDM 554
Query: 456 AKTADERNEANELLGNFNHPNNEPGI 481
++E EA ++L +P +
Sbjct: 555 YAKSNESWEAEKILKQLKSSQVKPDV 580
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 102/412 (24%), Positives = 192/412 (46%), Gaps = 14/412 (3%)
Query: 76 WNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMN-KKGYAPSVVSH 134
W +L W + D ++ M++ A G++G + +L M G V ++
Sbjct: 35 WEWALALLRWASDEGAADAAALE--MVVRALGREGQHDVVCDLLDEMPLPPGSRLDVRAY 92
Query: 135 TALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLD 194
T ++ A R GRY+ A +F ++ G P+ +TY ++L ++ + + + LL+
Sbjct: 93 TTVLHALSRAGRYERALQLFAELRRQGVVPTIVTYNVVLDVY---GRMGRSWPRIVALLE 149
Query: 195 EEKSP-LKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSF---ET 250
E ++ ++PD +I + G ++A F + RG VTYN+L+
Sbjct: 150 EMRAAGVEPDDFTASTVIAACGRDGLLDQAVAFFEDLKARGHVPCVVTYNALLQVFGKAG 209
Query: 251 NYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYN 310
NY E ++ +M+ +G QPD V+Y L Y +A EEA + M G+ P YN
Sbjct: 210 NYTEALRVLKEMEDSGCQPDAVTYNELAGTYARAGFFEEAAKCLDTMTSKGLLPNTFTYN 269
Query: 311 ILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQD 370
++ A+A G VD+A +F M+++ P++ +Y + S + + +
Sbjct: 270 TVMTAYANVGRVDEALALFDRMKKNGYVPNVNTYNLIFGMLGKKSRFTAMLEMLEEMSRS 329
Query: 371 GFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSA 430
G PN +T+ T++ K + + + + M+ G++ ++ + T++ AYG+ A
Sbjct: 330 GCTPNRVTWNTMLAVCGKRGMEDYVTRVLNGMKSCGVELSRDTYNTLISAYGRCGSRTYA 389
Query: 431 VVWYKEMESCGFPPDQKAKNILLS-LAKTAD---ERNEANELLGNFNHPNNE 478
Y EM S GF P N LL+ L++ D ++ +++L N PN++
Sbjct: 390 FKMYDEMISSGFTPCLTTYNALLNVLSRQGDWSTAQSIVSKMLKNGFKPNDQ 441
Score = 141 bits (356), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 94/331 (28%), Positives = 159/331 (48%), Gaps = 19/331 (5%)
Query: 134 HTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLL 193
HTAL + G ++ A A+ R G +A L++ V A + +V LL
Sbjct: 26 HTALELS----GHWEWALALLRWASDEGAADAA-----ALEMVVRALGREGQHDVVCDLL 76
Query: 194 DEEKSPLKP----DQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLM--- 246
DE PL P D + + +++ +AG YE+A +LFA + +GV + VTYN ++
Sbjct: 77 DE--MPLPPGSRLDVRAYTTVLHALSRAGRYERALQLFAELRRQGVVPTIVTYNVVLDVY 134
Query: 247 -SFETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPT 305
++ + + ++M+ AG++PD + + +I A G+ ++A+A FE++ G P
Sbjct: 135 GRMGRSWPRIVALLEEMRAAGVEPDDFTASTVIAACGRDGLLDQAVAFFEDLKARGHVPC 194
Query: 306 HKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFR 365
YN LL F +G +A V K M C PD +Y + Y A E A K
Sbjct: 195 VVTYNALLQVFGKAGNYTEALRVLKEMEDSGCQPDAVTYNELAGTYARAGFFEEAAKCLD 254
Query: 366 RLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNK 425
+ G +PN TY T++ YA V +++ + ++D+M+ NG PN + I GK
Sbjct: 255 TMTSKGLLPNTFTYNTVMTAYANVGRVDEALALFDRMKKNGYVPNVNTYNLIFGMLGKKS 314
Query: 426 DFDSAVVWYKEMESCGFPPDQKAKNILLSLA 456
F + + +EM G P++ N +L++
Sbjct: 315 RFTAMLEMLEEMSRSGCTPNRVTWNTMLAVC 345
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 96/395 (24%), Positives = 189/395 (47%), Gaps = 10/395 (2%)
Query: 61 DLVLGTLVRLKQLKKWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLS 120
+L+ G L + ++ + E+LE + +S N + + ++ GK+G + +VL+
Sbjct: 304 NLIFGML---GKKSRFTAMLEMLEEMS-RSGCTPNRVTWNTMLAVCGKRGMEDYVTRVLN 359
Query: 121 FMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEAN 180
M G S ++ L+ AYGR G A ++ M SSG P TY +L +
Sbjct: 360 GMKSCGVELSRDTYNTLISAYGRCGSRTYAFKMYDEMISSGFTPCLTTYNALLNVLSRQG 419
Query: 181 KFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTV 240
+ A+ + +L K+ KP+ + + +++ Y K G + + + S V
Sbjct: 420 DWSTAQSIVSKML---KNGFKPNDQSYSLLLQCYAKGGNAAGIESIEKEVYVGTIFPSWV 476
Query: 241 TYNSLM--SFETNYKE-VSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEM 297
+L+ +F+ E V K + +++ G +PD+V + ++ Y K +A +F+ +
Sbjct: 477 ILRTLVIANFKCRRLEGVEKAFQEVKAQGYKPDLVIFNSMLAMYAKNGLYSKATEMFDSI 536
Query: 298 LDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDM 357
+G+ P YN L+D +A S +A + K ++ + PD+ SY T+++ + +
Sbjct: 537 KQSGLSPDLITYNSLMDMYAKSNESWEAEKILKQLKSSQVKPDVVSYNTVINGFCKQGLI 596
Query: 358 EGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTI 417
+ A++ + DG P V+TY TL+ GYA + + E+ + M + +KP + + +
Sbjct: 597 KEAQRILSEMIADGMAPCVVTYHTLVGGYASLEMFNEAREVVNYMIHHNLKPMELTYRRV 656
Query: 418 MDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNIL 452
+D+Y K K +D A + E+ DQK +++L
Sbjct: 657 VDSYCKAKRYDEAREFLSEISDTDQNFDQKLQHML 691
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 89/399 (22%), Positives = 166/399 (41%), Gaps = 70/399 (17%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
L Y + G F +A K L M KG P+ ++ +M AY GR A A+F RM+ +G
Sbjct: 236 LAGTYARAGFFEEAAKCLDTMTSKGLLPNTFTYNTVMTAYANVGRVDEALALFDRMKKNG 295
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSP---------------------- 199
P+ TY +I + + ++F E+ + +P
Sbjct: 296 YVPNVNTYNLIFGMLGKKSRFTAMLEMLEEMSRSGCTPNRVTWNTMLAVCGKRGMEDYVT 355
Query: 200 ----------LKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLM--- 246
++ + ++ +I Y + G A K++ M G TYN+L+
Sbjct: 356 RVLNGMKSCGVELSRDTYNTLISAYGRCGSRTYAFKMYDEMISSGFTPCLTTYNALLNVL 415
Query: 247 SFETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYG------------------------ 282
S + ++ I +M + G +P+ SY+LL+ Y
Sbjct: 416 SRQGDWSTAQSIVSKMLKNGFKPNDQSYSLLLQCYAKGGNAAGIESIEKEVYVGTIFPSW 475
Query: 283 -----------KARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKC 331
K RR E F+E+ G +P +N +L +A +G+ +A +F
Sbjct: 476 VILRTLVIANFKCRRLEGVEKAFQEVKAQGYKPDLVIFNSMLAMYAKNGLYSKATEMFDS 535
Query: 332 MRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNN 391
+++ SPD+ +Y +++ Y +++ AEK ++LK P+V++Y T+I G+ K
Sbjct: 536 IKQSGLSPDLITYNSLMDMYAKSNESWEAEKILKQLKSSQVKPDVVSYNTVINGFCKQGL 595
Query: 392 LEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSA 430
+++ I +M +G+ P + T++ Y + F+ A
Sbjct: 596 IKEAQRILSEMIADGMAPCVVTYHTLVGGYASLEMFNEA 634
Score = 89.0 bits (219), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 61/236 (25%), Positives = 106/236 (44%), Gaps = 2/236 (0%)
Query: 249 ETNYKEVSKIYDQMQ-RAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHK 307
E + V + D+M G + DV +Y +++A +A R E AL +F E+ GV PT
Sbjct: 66 EGQHDVVCDLLDEMPLPPGSRLDVRAYTTVLHALSRAGRYERALQLFAELRRQGVVPTIV 125
Query: 308 AYNILLDAFAISGMV-DQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRR 366
YN++LD + G + + + MR PD + +T+++A ++ A FF
Sbjct: 126 TYNVVLDVYGRMGRSWPRIVALLEEMRAAGVEPDDFTASTVIAACGRDGLLDQAVAFFED 185
Query: 367 LKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKD 426
LK G VP V+TY L++ + K N + + + +M +G +P+ + + Y +
Sbjct: 186 LKARGHVPCVVTYNALLQVFGKAGNYTEALRVLKEMEDSGCQPDAVTYNELAGTYARAGF 245
Query: 427 FDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGIN 482
F+ A M S G P+ N +++ +EA L P +N
Sbjct: 246 FEEAAKCLDTMTSKGLLPNTFTYNTVMTAYANVGRVDEALALFDRMKKNGYVPNVN 301
>gi|357140650|ref|XP_003571877.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08610-like [Brachypodium distachyon]
Length = 753
Score = 146 bits (368), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 106/399 (26%), Positives = 186/399 (46%), Gaps = 20/399 (5%)
Query: 55 GQPLPKD---LVLGTLVRL----KQLKKWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYG 107
G LPKD L LG L R K ++ V+ E++ +I + + LI
Sbjct: 283 GVHLPKDKGMLYLGNLRRYCNNGKLIQACCVIDEMVLHGQIP-----DSKCCIRLIRGLV 337
Query: 108 KQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSAL 167
K G NKA +VL M G P ++ L+ RGG+ +A ++ M+ SG P+ +
Sbjct: 338 KTGKANKARQVLEVMVLSGGIPDTITCNMLIAQLCRGGQLSSAMSVLEDMRYSGTSPNGI 397
Query: 168 TYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFH-MMIYMYKKAGGYEKARKL 226
T+ +++ + + +A +T E+ P M + +++ + K G ++A ++
Sbjct: 398 TFNTLIRCMCNQHMYDKA----ITFWKEQLRIGWPPYVMTNTLLVDLICKKCGSKRAMEV 453
Query: 227 FALMAERGVQQSTVTYNSLMSFETN---YKEVSKIYDQMQRAGLQPDVVSYALLINAYGK 283
++ G Q VTYN+L+S K+ I ++ GL+P+ +Y +L+++
Sbjct: 454 LDELSLEGCQPDVVTYNALISASCKADRLKDAKTILTRLIAEGLEPNSTTYCILLHSLCN 513
Query: 284 ARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICS 343
RR E + M A P AYNI ++ F G +DQA V + M D+C PDI +
Sbjct: 514 KRRWAEVCDLLAHMKRANCEPDVTAYNIFINYFCKYGHLDQAIDVLEKMVSDKCCPDIVT 573
Query: 344 YTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMR 403
Y T+L+A +E A ++Q+G+ +ITY TLI A ++K M ++D+M
Sbjct: 574 YNTLLNAISKEGMVEEALVIAHFIRQNGWQLVLITYNTLIDALANKGEVKKAMVLFDEMA 633
Query: 404 VNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGF 442
I P+ + +++ + K + A+ + GF
Sbjct: 634 SGRISPDDITYGSLVMGFCKKNMSEEALELLNRTLALGF 672
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 78/349 (22%), Positives = 150/349 (42%), Gaps = 6/349 (1%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + F LI Q ++KA + G+ P V+++T L++ + K A +
Sbjct: 395 NGITFNTLIRCMCNQHMYDKAITFWKEQLRIGWPPYVMTNTLLVDLICKKCGSKRAMEVL 454
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
+ G +P +TY ++ +A++ K+A+ + L+ E L+P+ + ++++
Sbjct: 455 DELSLEGCQPDVVTYNALISASCKADRLKDAKTILTRLIAEG---LEPNSTTYCILLHSL 511
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSKIYDQMQRA---GLQPDV 271
+ + L A M + YN +++ Y + + D +++ PD+
Sbjct: 512 CNKRRWAEVCDLLAHMKRANCEPDVTAYNIFINYFCKYGHLDQAIDVLEKMVSDKCCPDI 571
Query: 272 VSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKC 331
V+Y L+NA K EEAL + + G + YN L+DA A G V +A +F
Sbjct: 572 VTYNTLLNAISKEGMVEEALVIAHFIRQNGWQLVLITYNTLIDALANKGEVKKAMVLFDE 631
Query: 332 MRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNN 391
M R SPD +Y +++ + + E A + R GF T+ +I+ +
Sbjct: 632 MASGRISPDDITYGSLVMGFCKKNMSEEALELLNRTLALGFQVKTTTFIMVIQALCRDGK 691
Query: 392 LEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESC 440
+E EI M N + + +I+ K+ + A ++E+ C
Sbjct: 692 VEAAAEILRVMVSETNNTNSSFYLSIVRRVAKSGRIEEAERLHQELIDC 740
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 59/256 (23%), Positives = 110/256 (42%), Gaps = 3/256 (1%)
Query: 202 PDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSK---I 258
PD K +I K G KAR++ +M G T+T N L++ ++S +
Sbjct: 324 PDSKCCIRLIRGLVKTGKANKARQVLEVMVLSGGIPDTITCNMLIAQLCRGGQLSSAMSV 383
Query: 259 YDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAI 318
+ M+ +G P+ +++ LI ++A+ ++E L G P +L+D
Sbjct: 384 LEDMRYSGTSPNGITFNTLIRCMCNQHMYDKAITFWKEQLRIGWPPYVMTNTLLVDLICK 443
Query: 319 SGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVIT 378
+A V + + C PD+ +Y ++SA A ++ A+ RL +G PN T
Sbjct: 444 KCGSKRAMEVLDELSLEGCQPDVVTYNALISASCKADRLKDAKTILTRLIAEGLEPNSTT 503
Query: 379 YGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEME 438
Y L+ ++ ++ M+ +P+ T + ++ + K D A+ ++M
Sbjct: 504 YCILLHSLCNKRRWAEVCDLLAHMKRANCEPDVTAYNIFINYFCKYGHLDQAIDVLEKMV 563
Query: 439 SCGFPPDQKAKNILLS 454
S PD N LL+
Sbjct: 564 SDKCCPDIVTYNTLLN 579
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/236 (22%), Positives = 97/236 (41%)
Query: 254 EVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILL 313
+ + D+M G PD LI K + +A V E M+ +G P N+L+
Sbjct: 309 QACCVIDEMVLHGQIPDSKCCIRLIRGLVKTGKANKARQVLEVMVLSGGIPDTITCNMLI 368
Query: 314 DAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFV 373
G + A +V + MR SP+ ++ T++ N + A F++ + G+
Sbjct: 369 AQLCRGGQLSSAMSVLEDMRYSGTSPNGITFNTLIRCMCNQHMYDKAITFWKEQLRIGWP 428
Query: 374 PNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVW 433
P V+T L+ K ++ ME+ D++ + G +P+ + ++ A K A
Sbjct: 429 PYVMTNTLLVDLICKKCGSKRAMEVLDELSLEGCQPDVVTYNALISASCKADRLKDAKTI 488
Query: 434 YKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGINGLSISVD 489
+ + G P+ ILL E +LL + N EP + +I ++
Sbjct: 489 LTRLIAEGLEPNSTTYCILLHSLCNKRRWAEVCDLLAHMKRANCEPDVTAYNIFIN 544
>gi|46390363|dbj|BAD15828.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|215697127|dbj|BAG91121.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 554
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 91/355 (25%), Positives = 170/355 (47%), Gaps = 6/355 (1%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
LI +G A VL M ++ P VV++T L+EA + YK A + M+ G
Sbjct: 164 LIRGLCGRGRTANALAVLDEMLRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKG 223
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
P +TY +++ + + +A E L +P+ +++++ A +E
Sbjct: 224 CTPDIVTYNVVVNGICQEGRVDDAIEFLKNL---PSYGCEPNTVSYNIVLKGLCTAERWE 280
Query: 222 KARKLFALMAERGVQQSTVTYNSLMSFETNYKEVS---KIYDQMQRAGLQPDVVSYALLI 278
A +L M ++G + VT+N L+SF V ++ +Q+ + G P+ +SY L+
Sbjct: 281 DAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLL 340
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCS 338
+A+ K ++ ++A+A + M+ G P +YN LL A SG VD A + ++ C+
Sbjct: 341 HAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCA 400
Query: 339 PDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEI 398
P + SY T++ A + A + + G P++ITY T+ G + + +E +
Sbjct: 401 PVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRA 460
Query: 399 YDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILL 453
+ K++ GI+PN ++ I+ K ++ SA+ + M G P++ IL+
Sbjct: 461 FGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTILI 515
Score = 139 bits (349), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 89/360 (24%), Positives = 175/360 (48%), Gaps = 10/360 (2%)
Query: 66 TLVR--LKQLKKWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMN 123
TL+R + + N ++ + E LR + D + + +L+ A K+ + +A K+L M
Sbjct: 163 TLIRGLCGRGRTANALAVLDEMLRRRCVPDV--VTYTILLEATCKRSGYKQAMKLLDEMR 220
Query: 124 KKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFK 183
KG P +V++ ++ + GR +A + + S G P+ ++Y I+LK A +++
Sbjct: 221 DKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWE 280
Query: 184 EAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYN 243
+AEE M + ++ P P+ F+M+I + G E A ++ + + G ++++YN
Sbjct: 281 DAEE-LMGEMGQKGCP--PNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYN 337
Query: 244 SLMSFETNYKEVSK---IYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDA 300
L+ K++ K D M G PD+VSY L+ A ++ + A+ + ++ D
Sbjct: 338 PLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDK 397
Query: 301 GVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGA 360
G P +YN ++D +G +A + M PDI +Y+T+ + +E A
Sbjct: 398 GCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDA 457
Query: 361 EKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDA 420
+ F +++ G PN + Y +I G K ++++ M NG PN++ +T +++
Sbjct: 458 IRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTILIEG 517
Score = 132 bits (331), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 92/337 (27%), Positives = 149/337 (44%), Gaps = 14/337 (4%)
Query: 156 RMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYK 215
R+ S RP A T ++K + + EA V + PD ++ M+ Y
Sbjct: 86 RLVGSARRPDAGTCAALIKKLSASGRTAEARRVL--------AACGPDVMAYNAMVAGYC 137
Query: 216 KAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSK---IYDQMQRAGLQPDVV 272
AG + AR+L +AE V+ TYN+L+ + + D+M R PDVV
Sbjct: 138 GAGQLDAARRL---VAEMPVEPDAYTYNTLIRGLCGRGRTANALAVLDEMLRRRCVPDVV 194
Query: 273 SYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCM 332
+Y +L+ A K ++A+ + +EM D G P YN++++ G VD A K +
Sbjct: 195 TYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNL 254
Query: 333 RRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNL 392
C P+ SY +L A E AE+ + Q G PNV+T+ LI + +
Sbjct: 255 PSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLV 314
Query: 393 EKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNIL 452
E +E+ +++ G PN + ++ A+ K K D A+ + M S G PD + N L
Sbjct: 315 EPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTL 374
Query: 453 LSLAKTADERNEANELLGNFNHPNNEPGINGLSISVD 489
L+ + E + A ELL P + + +D
Sbjct: 375 LTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVID 411
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 80/377 (21%), Positives = 162/377 (42%), Gaps = 18/377 (4%)
Query: 108 KQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSAL 167
++G+ ++A +++ + P + AL++ GR A R + + GP +
Sbjct: 77 RRGELDEALRLVGSARR----PDAGTCAALIKKLSASGRTAEAR---RVLAACGP--DVM 127
Query: 168 TYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLF 227
Y ++ + A + A + + P++PD ++ +I G A +
Sbjct: 128 AYNAMVAGYCGAGQLDAARRLVAEM------PVEPDAYTYNTLIRGLCGRGRTANALAVL 181
Query: 228 ALMAERGVQQSTVTYNSLM---SFETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKA 284
M R VTY L+ + YK+ K+ D+M+ G PD+V+Y +++N +
Sbjct: 182 DEMLRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQE 241
Query: 285 RREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSY 344
R ++A+ + + G P +YNI+L + + A + M + C P++ ++
Sbjct: 242 GRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTF 301
Query: 345 TTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRV 404
++S +E A + ++ + G PN ++Y L+ + K ++K M D M
Sbjct: 302 NMLISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVS 361
Query: 405 NGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNE 464
G P+ + T++ A ++ + D AV +++ G P + N ++ A + E
Sbjct: 362 RGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKE 421
Query: 465 ANELLGNFNHPNNEPGI 481
A ELL +P I
Sbjct: 422 ALELLNEMVSKGLQPDI 438
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 68/301 (22%), Positives = 139/301 (46%), Gaps = 10/301 (3%)
Query: 79 VSEVLEWLR-IQSW-WDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTA 136
V + +E+L+ + S+ + N + + +++ + AE+++ M +KG P+VV+
Sbjct: 244 VDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNM 303
Query: 137 LMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEE 196
L+ R G + A + ++ G P++L+Y +L F + K +A M LD
Sbjct: 304 LISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKA----MAFLDLM 359
Query: 197 KS-PLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETN---Y 252
S PD ++ ++ ++G + A +L + ++G ++YN+++ T
Sbjct: 360 VSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKT 419
Query: 253 KEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNIL 312
KE ++ ++M GLQPD+++Y+ + + R E+A+ F ++ D G+RP YN +
Sbjct: 420 KEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAI 479
Query: 313 LDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGF 372
+ A +F M + C P+ +YT ++ ++ A L G
Sbjct: 480 ILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTILIEGLAYEGLIKEARDLLDELCSRGV 539
Query: 373 V 373
V
Sbjct: 540 V 540
>gi|357481229|ref|XP_003610900.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355512235|gb|AES93858.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1508
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 101/401 (25%), Positives = 181/401 (45%), Gaps = 7/401 (1%)
Query: 72 QLKKWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSV 131
+LK W ++E LR Q + + LI AY G + +A + + M ++G +P+V
Sbjct: 801 KLKMWQSAESIVENLR-QRCSKMDRKVWNALIHAYAFSGCYERARAIFNTMMREGPSPTV 859
Query: 132 VSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMT 191
S L++A GR + + +Q + S + ++L+ F +A E ++V+
Sbjct: 860 ESVNGLLQALIVDGRLSELYVVIQELQDMDLKISKSSILLMLEAFAQAGNLFEVQKVYNG 919
Query: 192 LLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETN 251
+ + + P ++ +MI + + R + + M E G + +NS++ ++
Sbjct: 920 M---KAAGYFPTMHLYRLMIGLLCRFKRVRDVRVMLSEMGEAGFKPDLQIFNSVLKLYSS 976
Query: 252 YKEVSK---IYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKA 308
+E IY +Q AGL PD +Y LI Y + R EE L++ +M G+ P
Sbjct: 977 IEEFQNMGVIYQMIQDAGLAPDEETYNTLITMYCRDHRPEEGLSLMHKMKSLGLEPKRDT 1036
Query: 309 YNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLK 368
Y ++ AF+ + DQA +F+ +R + D Y M+ Y + D + AE +K
Sbjct: 1037 YRSMIAAFSKQQLYDQAEELFEELRSNGYKLDRSFYHLMMKMYRTSGDHQKAENLLEIMK 1096
Query: 369 QDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFD 428
+ G PN T L+ Y K E+ I +R G + +++++DAY K D
Sbjct: 1097 EAGIEPNTATMHLLMVSYGKSGQPEEADRILKNLRTMGAVLDTLPYSSVIDAYLKKGDAK 1156
Query: 429 SAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELL 469
+ + EM+ PD + + A + E N+AN LL
Sbjct: 1157 AGIEKLTEMKEAAIEPDHRIWTCFIRAASLSGEVNDANNLL 1197
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 107/441 (24%), Positives = 196/441 (44%), Gaps = 30/441 (6%)
Query: 30 NWRRLMNQIEEVGSAVAVLRSERTRGQPLPKDLVLGT------LVRLKQLKKWNVVSEVL 83
NWR +++ + + L+ + G L + VL T +V+ W E+
Sbjct: 161 NWRE---RVKFLTDRILSLKCDEFVGHVLEEHRVLFTPTDFCFVVKSVGQSSWQRALELY 217
Query: 84 EWLRIQSWWDFNEMDFLMLITAYGKQGD-------FNKAEKVLSFMNKKGYAPSVVSHTA 136
E L +Q W+ N +++ GK F KAE V+ A +V + A
Sbjct: 218 ECLTMQQWYATNARMVATILSVLGKANQEGIAVEIFAKAESVI--------ADTVQVYNA 269
Query: 137 LMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEE 196
+M Y R G ++ +F M+ G P +++ ++ V++ + + LLDE
Sbjct: 270 MMGVYARNGNFEKVNEMFNLMRERGCEPDIVSFNTLINAKVKS--CATVSGLAIELLDEV 327
Query: 197 -KSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYK-- 253
K L+PD ++ +I + ++A +F+ M Q TYN+++S
Sbjct: 328 GKFGLRPDIITYNTLISACSRESNLKEAIGVFSHMESNRCQPDLWTYNAMISVYGRCGFA 387
Query: 254 -EVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNIL 312
+ ++++++ G PD V+Y L+ A+ K E+ + EEM+ G YN +
Sbjct: 388 LKAEHLFEKLKSNGFSPDAVTYNSLLYAFSKEGNTEKVRDISEEMVKMGFGKDEMTYNTI 447
Query: 313 LDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGF 372
+ + G D+A +++ M+ +PD +YT ++ AS +E A K + G
Sbjct: 448 IHMYGKHGRHDEALRLYRDMKSSGRNPDAVTYTVLIDLLGKASKIEEASKVMSEMLDAGV 507
Query: 373 VPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVV 432
P + TY LI YAKV + E +++MR +GIK + ++ ++D + + + A
Sbjct: 508 KPTLHTYSALICAYAKVGRRVEAEETFNRMRESGIKADHLAYSVMLDFFLRFNEIKKAAA 567
Query: 433 WYKEMESCGFPPDQKAKNILL 453
Y+EM GF PD ++L
Sbjct: 568 LYQEMIEAGFTPDTGLYEVML 588
Score = 139 bits (349), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 86/290 (29%), Positives = 152/290 (52%), Gaps = 10/290 (3%)
Query: 203 DQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFET---NYKEVSKIY 259
+ +M ++ + KA A ++FA AE + + YN++M N+++V++++
Sbjct: 229 NARMVATILSVLGKANQEGIAVEIFA-KAESVIADTVQVYNAMMGVYARNGNFEKVNEMF 287
Query: 260 DQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDA----GVRPTHKAYNILLDA 315
+ M+ G +PD+VS+ LINA K+ LA+ E+LD G+RP YN L+ A
Sbjct: 288 NLMRERGCEPDIVSFNTLINAKVKSCATVSGLAI--ELLDEVGKFGLRPDIITYNTLISA 345
Query: 316 FAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPN 375
+ + +A VF M +RC PD+ +Y M+S Y AE F +LK +GF P+
Sbjct: 346 CSRESNLKEAIGVFSHMESNRCQPDLWTYNAMISVYGRCGFALKAEHLFEKLKSNGFSPD 405
Query: 376 VITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYK 435
+TY +L+ ++K N EK+ +I ++M G ++ + TI+ YGK+ D A+ Y+
Sbjct: 406 AVTYNSLLYAFSKEGNTEKVRDISEEMVKMGFGKDEMTYNTIIHMYGKHGRHDEALRLYR 465
Query: 436 EMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGINGLS 485
+M+S G PD +L+ L A + EA++++ +P ++ S
Sbjct: 466 DMKSSGRNPDAVTYTVLIDLLGKASKIEEASKVMSEMLDAGVKPTLHTYS 515
Score = 132 bits (333), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 78/279 (27%), Positives = 140/279 (50%), Gaps = 6/279 (2%)
Query: 115 AEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILK 174
A ++L + K G P ++++ L+ A R K A +F M+S+ +P TY ++
Sbjct: 320 AIELLDEVGKFGLRPDIITYNTLISACSRESNLKEAIGVFSHMESNRCQPDLWTYNAMIS 379
Query: 175 LFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERG 234
++ +AE +F L + + PD ++ ++Y + K G EK R + M + G
Sbjct: 380 VYGRCGFALKAEHLFEKL---KSNGFSPDAVTYNSLLYAFSKEGNTEKVRDISEEMVKMG 436
Query: 235 VQQSTVTYNSLMSF---ETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEAL 291
+ +TYN+++ + E ++Y M+ +G PD V+Y +LI+ GKA + EEA
Sbjct: 437 FGKDEMTYNTIIHMYGKHGRHDEALRLYRDMKSSGRNPDAVTYTVLIDLLGKASKIEEAS 496
Query: 292 AVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAY 351
V EMLDAGV+PT Y+ L+ A+A G +A F MR D +Y+ ML +
Sbjct: 497 KVMSEMLDAGVKPTLHTYSALICAYAKVGRRVEAEETFNRMRESGIKADHLAYSVMLDFF 556
Query: 352 VNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVN 390
+ ++++ A ++ + + GF P+ Y ++ + N
Sbjct: 557 LRFNEIKKAAALYQEMIEAGFTPDTGLYEVMLPALVREN 595
Score = 121 bits (304), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 77/301 (25%), Positives = 145/301 (48%), Gaps = 9/301 (2%)
Query: 172 ILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMA 231
IL + +AN+ A E+F + +S + ++++ M+ +Y + G +EK ++F LM
Sbjct: 236 ILSVLGKANQEGIAVEIFA----KAESVIADTVQVYNAMMGVYARNGNFEKVNEMFNLMR 291
Query: 232 ERGVQQSTVTYNSLM-----SFETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARR 286
ERG + V++N+L+ S T ++ D++ + GL+PD+++Y LI+A +
Sbjct: 292 ERGCEPDIVSFNTLINAKVKSCATVSGLAIELLDEVGKFGLRPDIITYNTLISACSRESN 351
Query: 287 EEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTT 346
+EA+ VF M +P YN ++ + G +A +F+ ++ + SPD +Y +
Sbjct: 352 LKEAIGVFSHMESNRCQPDLWTYNAMISVYGRCGFALKAEHLFEKLKSNGFSPDAVTYNS 411
Query: 347 MLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNG 406
+L A+ + E + + GF + +TY T+I Y K ++ + +Y M+ +G
Sbjct: 412 LLYAFSKEGNTEKVRDISEEMVKMGFGKDEMTYNTIIHMYGKHGRHDEALRLYRDMKSSG 471
Query: 407 IKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEAN 466
P+ +T ++D GK + A EM G P + L+ R EA
Sbjct: 472 RNPDAVTYTVLIDLLGKASKIEEASKVMSEMLDAGVKPTLHTYSALICAYAKVGRRVEAE 531
Query: 467 E 467
E
Sbjct: 532 E 532
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 84/383 (21%), Positives = 174/383 (45%), Gaps = 8/383 (2%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
LI K F+ A ++ S M G PS + +++ Y R G + A+ + + +
Sbjct: 723 LIHECTKSEQFDIASQLFSDMRFNGVEPSECLYQSMVSVYCRIGFPETAQHLLYHAEKND 782
Query: 162 PRPSALTYQII--LKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGG 219
+T II ++ + + ++ AE + L + K D+K+++ +I+ Y +G
Sbjct: 783 IILDNVTVHIIDIIETYGKLKMWQSAESIVENL---RQRCSKMDRKVWNALIHAYAFSGC 839
Query: 220 YEKARKLFALMAERGVQQSTVTYNSLMS---FETNYKEVSKIYDQMQRAGLQPDVVSYAL 276
YE+AR +F M G + + N L+ + E+ + ++Q L+ S L
Sbjct: 840 YERARAIFNTMMREGPSPTVESVNGLLQALIVDGRLSELYVVIQELQDMDLKISKSSILL 899
Query: 277 LINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDR 336
++ A+ +A E V+ M AG PT Y +++ V R + M
Sbjct: 900 MLEAFAQAGNLFEVQKVYNGMKAAGYFPTMHLYRLMIGLLCRFKRVRDVRVMLSEMGEAG 959
Query: 337 CSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMM 396
PD+ + ++L Y + + + ++ ++ G P+ TY TLI Y + + E+ +
Sbjct: 960 FKPDLQIFNSVLKLYSSIEEFQNMGVIYQMIQDAGLAPDEETYNTLITMYCRDHRPEEGL 1019
Query: 397 EIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLA 456
+ KM+ G++P + + +++ A+ K + +D A ++E+ S G+ D+ ++++ +
Sbjct: 1020 SLMHKMKSLGLEPKRDTYRSMIAAFSKQQLYDQAEELFEELRSNGYKLDRSFYHLMMKMY 1079
Query: 457 KTADERNEANELLGNFNHPNNEP 479
+T+ + +A LL EP
Sbjct: 1080 RTSGDHQKAENLLEIMKEAGIEP 1102
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 80/371 (21%), Positives = 156/371 (42%), Gaps = 35/371 (9%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
+I YGK + AE ++ + ++ AL+ AY G Y+ A AIF M G
Sbjct: 795 IIETYGKLKMWQSAESIVENLRQRCSKMDRKVWNALIHAYAFSGCYERARAIFNTMMREG 854
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
P P+ + +L+ + + E V L D + LK + +M+ + +AG
Sbjct: 855 PSPTVESVNGLLQALIVDGRLSELYVVIQELQDMD---LKISKSSILLMLEAFAQAG--- 908
Query: 222 KARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSKIYDQMQRAGLQPDVVSYALLINAY 281
N EV K+Y+ M+ AG P + Y L+I
Sbjct: 909 -----------------------------NLFEVQKVYNGMKAAGYFPTMHLYRLMIGLL 939
Query: 282 GKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDI 341
+ +R + + EM +AG +P + +N +L ++ +++ ++ +PD
Sbjct: 940 CRFKRVRDVRVMLSEMGEAGFKPDLQIFNSVLKLYSSIEEFQNMGVIYQMIQDAGLAPDE 999
Query: 342 CSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDK 401
+Y T+++ Y E ++K G P TY ++I ++K ++ E++++
Sbjct: 1000 ETYNTLITMYCRDHRPEEGLSLMHKMKSLGLEPKRDTYRSMIAAFSKQQLYDQAEELFEE 1059
Query: 402 MRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADE 461
+R NG K +++ + +M Y + D A + M+ G P+ ++L+ + +
Sbjct: 1060 LRSNGYKLDRSFYHLMMKMYRTSGDHQKAENLLEIMKEAGIEPNTATMHLLMVSYGKSGQ 1119
Query: 462 RNEANELLGNF 472
EA+ +L N
Sbjct: 1120 PEEADRILKNL 1130
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 77/388 (19%), Positives = 156/388 (40%), Gaps = 43/388 (11%)
Query: 108 KQGDFNKAEKVLSFMNKKGY---------------------------------APSVVSH 134
K G ++ K+L GY AP +
Sbjct: 624 KGGCYDHGAKMLKVAISNGYELDREIFLSIMSSYSSSARYSEACELVEFFREHAPDDIQM 683
Query: 135 T--ALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTL 192
AL+ + G+ A +R G S Y+ ++ ++ +F A ++F
Sbjct: 684 ITEALIIILCKAGKLDAALEEYRSRGGLGTFRSCTMYESLIHECTKSEQFDIASQLFS-- 741
Query: 193 LDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETN- 251
D + ++P + ++ M+ +Y + G E A+ L + + VT + + ET
Sbjct: 742 -DMRFNGVEPSECLYQSMVSVYCRIGFPETAQHLLYHAEKNDIILDNVTVHIIDIIETYG 800
Query: 252 ----YKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHK 307
++ I + +++ + D + LI+AY + E A A+F M+ G PT +
Sbjct: 801 KLKMWQSAESIVENLRQRCSKMDRKVWNALIHAYAFSGCYERARAIFNTMMREGPSPTVE 860
Query: 308 AYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRL 367
+ N LL A + G + + V + ++ S ML A+ A ++ +K + +
Sbjct: 861 SVNGLLQALIVDGRLSELYVVIQELQDMDLKISKSSILLMLEAFAQAGNLFEVQKVYNGM 920
Query: 368 KQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDF 427
K G+ P + Y +I + + + + +M G KP+ IF +++ Y ++F
Sbjct: 921 KAAGYFPTMHLYRLMIGLLCRFKRVRDVRVMLSEMGEAGFKPDLQIFNSVLKLYSSIEEF 980
Query: 428 DSAVVWYKEMESCGFPPDQKAKNILLSL 455
+ V Y+ ++ G PD++ N L+++
Sbjct: 981 QNMGVIYQMIQDAGLAPDEETYNTLITM 1008
>gi|255661210|gb|ACU25774.1| pentatricopeptide repeat-containing protein [Stachytarpheta
cayennensis]
Length = 426
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 90/378 (23%), Positives = 184/378 (48%), Gaps = 41/378 (10%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
LI K D++KA + S + + G P +V++ +++ +G+ ++ A ++ M+ +G
Sbjct: 50 LIELSRKLCDYSKAISIFSRLKRAGITPDLVAYNSMINVFGKAKLFREARSLISEMREAG 109
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTL---------------------LDEEKSP- 199
P ++Y +L ++VE KF EA VF + LD K
Sbjct: 110 VVPDTVSYSTLLTMYVENQKFLEALSVFAEMREIKCLVDLTTCNIMIDVYGQLDMAKEAD 169
Query: 200 ----------LKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSF- 248
++P+ ++ ++ +Y A + +A LF LM + ++Q+ VTYN++M
Sbjct: 170 KLFWSMRKVGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKDIEQNVVTYNTMMMIY 229
Query: 249 --ETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTH 306
+++ + + +M G++P+ ++Y+ +I+ +GK + + A +F+++ +GV H
Sbjct: 230 GKTLEHEKANNLIQEMHNRGIEPNAITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDH 289
Query: 307 KAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRR 366
Y ++ A+ +G+V A+ + ++R PD T + A +E A FR+
Sbjct: 290 VLYQTMIVAYERAGLVAHAKRLLHELKR----PDNIPRDTAIHILAGAGRIEEATWVFRQ 345
Query: 367 LKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKD 426
G V ++ + +I ++K ++E+++KMR G P+ + + +++AYGK +
Sbjct: 346 AIDAGEVKDITVFERMIDLFSKYKKYPNVVEVFEKMRGLGYFPDSNVISLVLNAYGKLHE 405
Query: 427 FDSAVVWYKEM--ESCGF 442
FD A Y +M E C F
Sbjct: 406 FDXANDMYMDMQDEGCVF 423
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 86/326 (26%), Positives = 155/326 (47%), Gaps = 6/326 (1%)
Query: 164 PSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKA 223
P TY ++ F + F +A ++ +++++ P D ++ +I + +K Y KA
Sbjct: 7 PDRYTYSTLITHFGKEGLFDDALS-WLQKMEQDRVP--GDLVLYSNLIELSRKLCDYSKA 63
Query: 224 RKLFALMAERGVQQSTVTYNSLMSF---ETNYKEVSKIYDQMQRAGLQPDVVSYALLINA 280
+F+ + G+ V YNS+++ ++E + +M+ AG+ PD VSY+ L+
Sbjct: 64 ISIFSRLKRAGITPDLVAYNSMINVFGKAKLFREARSLISEMREAGVVPDTVSYSTLLTM 123
Query: 281 YGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPD 340
Y + ++ EAL+VF EM + NI++D + M +A +F MR+ P+
Sbjct: 124 YVENQKFLEALSVFAEMREIKCLVDLTTCNIMIDVYGQLDMAKEADKLFWSMRKVGIEPN 183
Query: 341 ICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYD 400
+ SY T+L Y +A A FR +++ NV+TY T++ Y K EK +
Sbjct: 184 VVSYNTLLRVYGDAELFGEAIHLFRLMQRKDIEQNVVTYNTMMMIYGKTLEHEKANNLIQ 243
Query: 401 KMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTAD 460
+M GI+PN ++TI+ +GK D A + ++++ S G D ++ + A
Sbjct: 244 EMHNRGIEPNAITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDHVLYQTMIVAYERAG 303
Query: 461 ERNEANELLGNFNHPNNEPGINGLSI 486
A LL P+N P + I
Sbjct: 304 LVAHAKRLLHELKRPDNIPRDTAIHI 329
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 55/244 (22%), Positives = 114/244 (46%), Gaps = 6/244 (2%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + + L+ YG F +A + M +K +VV++ +M YG+ ++ A +
Sbjct: 183 NVVSYNTLLRVYGDAELFGEAIHLFRLMQRKDIEQNVVTYNTMMMIYGKTLEHEKANNLI 242
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
+ M + G P+A+TY I+ ++ + K A +F L S ++ D ++ MI Y
Sbjct: 243 QEMHNRGIEPNAITYSTIISIWGKVGKLDRAAMLFQKL---RSSGVEIDHVLYQTMIVAY 299
Query: 215 KKAGGYEKARKLFA-LMAERGVQQSTVTYNSLMSFETNYKEVSKIYDQMQRAGLQPDVVS 273
++AG A++L L + + T + +++ +E + ++ Q AG D+
Sbjct: 300 ERAGLVAHAKRLLHELKRPDNIPRDTAIH--ILAGAGRIEEATWVFRQAIDAGEVKDITV 357
Query: 274 YALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMR 333
+ +I+ + K ++ + VFE+M G P +++L+A+ D A ++ M+
Sbjct: 358 FERMIDLFSKYKKYPNVVEVFEKMRGLGYFPDSNVISLVLNAYGKLHEFDXANDMYMDMQ 417
Query: 334 RDRC 337
+ C
Sbjct: 418 DEGC 421
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 43/181 (23%), Positives = 81/181 (44%)
Query: 301 GVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGA 360
+ P Y+ L+ F G+ D A + + M +DR D+ Y+ ++ D A
Sbjct: 4 ALSPDRYTYSTLITHFGKEGLFDDALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDYSKA 63
Query: 361 EKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDA 420
F RLK+ G P+++ Y ++I + K + + +MR G+ P+ ++T++
Sbjct: 64 ISIFSRLKRAGITPDLVAYNSMINVFGKAKLFREARSLISEMREAGVVPDTVSYSTLLTM 123
Query: 421 YGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPG 480
Y +N+ F A+ + EM D NI++ + D EA++L + EP
Sbjct: 124 YVENQKFLEALSVFAEMREIKCLVDLTTCNIMIDVYGQLDMAKEADKLFWSMRKVGIEPN 183
Query: 481 I 481
+
Sbjct: 184 V 184
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 78/334 (23%), Positives = 147/334 (44%), Gaps = 20/334 (5%)
Query: 48 LRSERTRGQPLPKDLVLGTLVRL-----KQLKKWNVVSEVLEWLRIQSWWDFNEMDFLML 102
L SE +P + TL+ + K L+ +V +E+ E I+ D + ++
Sbjct: 101 LISEMREAGVVPDTVSYSTLLTMYVENQKFLEALSVFAEMRE---IKCLVDLTTCN--IM 155
Query: 103 ITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGP 162
I YG+ +A+K+ M K G P+VVS+ L+ YG + A +FR MQ
Sbjct: 156 IDVYGQLDMAKEADKLFWSMRKVGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKDI 215
Query: 163 RPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEK 222
+ +TY ++ ++ K E E+ + + ++P+ + +I ++ K G ++
Sbjct: 216 EQNVVTYNTMMMIY---GKTLEHEKANNLIQEMHNRGIEPNAITYSTIISIWGKVGKLDR 272
Query: 223 ARKLFALMAERGVQQSTVTYNSLM-SFETN--YKEVSKIYDQMQRAGLQPDVVSYALLIN 279
A LF + GV+ V Y +++ ++E ++ +++R PD + I+
Sbjct: 273 AAMLFQKLRSSGVEIDHVLYQTMIVAYERAGLVAHAKRLLHELKR----PDNIPRDTAIH 328
Query: 280 AYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSP 339
A R EEA VF + +DAG + ++D F+ VF+ MR P
Sbjct: 329 ILAGAGRIEEATWVFRQAIDAGEVKDITVFERMIDLFSKYKKYPNVVEVFEKMRGLGYFP 388
Query: 340 DICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFV 373
D + +L+AY + + A + ++ +G V
Sbjct: 389 DSNVISLVLNAYGKLHEFDXANDMYMDMQDEGCV 422
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/249 (21%), Positives = 108/249 (43%), Gaps = 35/249 (14%)
Query: 266 GLQPDVVSYALLINAYGK--------------------------------ARR---EEEA 290
L PD +Y+ LI +GK +R+ +A
Sbjct: 4 ALSPDRYTYSTLITHFGKEGLFDDALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDYSKA 63
Query: 291 LAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSA 350
+++F + AG+ P AYN +++ F + + +AR++ MR PD SY+T+L+
Sbjct: 64 ISIFSRLKRAGITPDLVAYNSMINVFGKAKLFREARSLISEMREAGVVPDTVSYSTLLTM 123
Query: 351 YVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPN 410
YV A F +++ + ++ T +I Y +++ ++ +++ MR GI+PN
Sbjct: 124 YVENQKFLEALSVFAEMREIKCLVDLTTCNIMIDVYGQLDMAKEADKLFWSMRKVGIEPN 183
Query: 411 QTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLG 470
+ T++ YG + F A+ ++ M+ + N ++ + E +AN L+
Sbjct: 184 VVSYNTLLRVYGDAELFGEAIHLFRLMQRKDIEQNVVTYNTMMMIYGKTLEHEKANNLIQ 243
Query: 471 NFNHPNNEP 479
++ EP
Sbjct: 244 EMHNRGIEP 252
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/123 (24%), Positives = 64/123 (52%)
Query: 333 RRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNL 392
R SPD +Y+T+++ + + A + ++++QD +++ Y LI+ K+ +
Sbjct: 1 RERALSPDRYTYSTLITHFGKEGLFDDALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDY 60
Query: 393 EKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNIL 452
K + I+ +++ GI P+ + ++++ +GK K F A EM G PD + + L
Sbjct: 61 SKAISIFSRLKRAGITPDLVAYNSMINVFGKAKLFREARSLISEMREAGVVPDTVSYSTL 120
Query: 453 LSL 455
L++
Sbjct: 121 LTM 123
>gi|255548994|ref|XP_002515553.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223545497|gb|EEF47002.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 927
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 86/356 (24%), Positives = 176/356 (49%), Gaps = 7/356 (1%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
L+ Y KQ A + MN+ G +P+ V++ L+E + G A ++ +M++
Sbjct: 355 LVKGYCKQDKLVSALEFFDKMNENGPSPNRVTYAVLIEWCCKNGNMAKAYDLYTQMKNKN 414
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
P+ +++ F++ +EA ++F DE + + ++ ++ K G
Sbjct: 415 ICPTVFIVNSLIRGFLKVESREEASKLF----DEAVACDIANIFTYNSLLSWLCKEGKMS 470
Query: 222 KARKLFALMAERGVQQSTVTYNSLM---SFETNYKEVSKIYDQMQRAGLQPDVVSYALLI 278
+A L+ M ++G+ + V+YNS++ + N + ++ M GL+P+V++Y++L+
Sbjct: 471 EATTLWQKMLDKGLAPTKVSYNSMILGHCRQGNLDMAASVFSDMLDCGLKPNVITYSILM 530
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCS 338
+ Y K E A VF+ M+D + P+ YNI ++ G +A+ + K
Sbjct: 531 DGYFKNGDTEYAFYVFDRMVDENIVPSDFTYNIKINGLCKVGRTSEAQDMLKKFVEKGFV 590
Query: 339 PDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEI 398
P +Y +++ ++ + A +R + + G PNVITY TLI G+ K NN + +++
Sbjct: 591 PVCLTYNSIMDGFIKEGSVSSALTAYREMCESGVSPNVITYTTLINGFCKNNNTDLALKM 650
Query: 399 YDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLS 454
++MR G++ + + ++D + K +D ++A + E+ G P+ N L+S
Sbjct: 651 RNEMRNKGLELDIAAYGALIDGFCKKQDIETASWLFSELLDGGLSPNSVIYNSLIS 706
Score = 142 bits (358), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 103/383 (26%), Positives = 180/383 (46%), Gaps = 10/383 (2%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
L++ K+G ++A + M KG AP+ VS+ +++ + R G A ++F M G
Sbjct: 459 LLSWLCKEGKMSEATTLWQKMLDKGLAPTKVSYNSMILGHCRQGNLDMAASVFSDMLDCG 518
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
+P+ +TY I++ + + + A VF ++DE + P +++ I K G
Sbjct: 519 LKPNVITYSILMDGYFKNGDTEYAFYVFDRMVDEN---IVPSDFTYNIKINGLCKVGRTS 575
Query: 222 KARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSKI---YDQMQRAGLQPDVVSYALLI 278
+A+ + E+G +TYNS+M VS Y +M +G+ P+V++Y LI
Sbjct: 576 EAQDMLKKFVEKGFVPVCLTYNSIMDGFIKEGSVSSALTAYREMCESGVSPNVITYTTLI 635
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCS 338
N + K + AL + EM + G+ AY L+D F ++ A +F + S
Sbjct: 636 NGFCKNNNTDLALKMRNEMRNKGLELDIAAYGALIDGFCKKQDIETASWLFSELLDGGLS 695
Query: 339 PDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEI 398
P+ Y +++S Y N ++ME A +R+ +G ++ TY TLI G K L +++
Sbjct: 696 PNSVIYNSLISGYRNLNNMEAALNLQKRMLGEGISCDLQTYTTLIDGLLKEGRLVLALDL 755
Query: 399 YDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKT 458
Y +M GI P+ I+T +++ ++A EME P+ N L++
Sbjct: 756 YSEMSAKGIIPDIIIYTVLINGLCGKGQLENAQKILAEMERDSITPNVPIYNALIAGHFK 815
Query: 459 ADERNEA----NELLGNFNHPNN 477
A EA NE+L PN+
Sbjct: 816 AGNLQEAFRLHNEMLDKGLTPND 838
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 89/356 (25%), Positives = 171/356 (48%), Gaps = 6/356 (1%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
+I + +QG+ + A V S M G P+V++++ LM+ Y + G + A +F RM
Sbjct: 494 MILGHCRQGNLDMAASVFSDMLDCGLKPNVITYSILMDGYFKNGDTEYAFYVFDRMVDEN 553
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
PS TY I + + + EA+++ +++ P+ ++ ++ + K G
Sbjct: 554 IVPSDFTYNIKINGLCKVGRTSEAQDMLKKFVEKGFVPV---CLTYNSIMDGFIKEGSVS 610
Query: 222 KARKLFALMAERGVQQSTVTYNSLMS--FETNYKEVS-KIYDQMQRAGLQPDVVSYALLI 278
A + M E GV + +TY +L++ + N +++ K+ ++M+ GL+ D+ +Y LI
Sbjct: 611 SALTAYREMCESGVSPNVITYTTLINGFCKNNNTDLALKMRNEMRNKGLELDIAAYGALI 670
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCS 338
+ + K + E A +F E+LD G+ P YN L+ + ++ A + K M + S
Sbjct: 671 DGFCKKQDIETASWLFSELLDGGLSPNSVIYNSLISGYRNLNNMEAALNLQKRMLGEGIS 730
Query: 339 PDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEI 398
D+ +YTT++ + + A + + G +P++I Y LI G LE +I
Sbjct: 731 CDLQTYTTLIDGLLKEGRLVLALDLYSEMSAKGIIPDIIIYTVLINGLCGKGQLENAQKI 790
Query: 399 YDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLS 454
+M + I PN I+ ++ + K + A + EM G P+ +IL++
Sbjct: 791 LAEMERDSITPNVPIYNALIAGHFKAGNLQEAFRLHNEMLDKGLTPNDTTYDILIN 846
Score = 108 bits (270), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 72/293 (24%), Positives = 140/293 (47%), Gaps = 8/293 (2%)
Query: 103 ITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGP 162
I K G ++A+ +L +KG+ P +++ ++M+ + + G +A +R M SG
Sbjct: 565 INGLCKVGRTSEAQDMLKKFVEKGFVPVCLTYNSIMDGFIKEGSVSSALTAYREMCESGV 624
Query: 163 RPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSP-LKPDQKMFHMMIYMYKKAGGYE 221
P+ +TY ++ F + N ++ + + +E ++ L+ D + +I + K E
Sbjct: 625 SPNVITYTTLINGFCKNNN----TDLALKMRNEMRNKGLELDIAAYGALIDGFCKKQDIE 680
Query: 222 KARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSKIYDQMQRA---GLQPDVVSYALLI 278
A LF+ + + G+ ++V YNSL+S N + + +R G+ D+ +Y LI
Sbjct: 681 TASWLFSELLDGGLSPNSVIYNSLISGYRNLNNMEAALNLQKRMLGEGISCDLQTYTTLI 740
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCS 338
+ K R AL ++ EM G+ P Y +L++ G ++ A+ + M RD +
Sbjct: 741 DGLLKEGRLVLALDLYSEMSAKGIIPDIIIYTVLINGLCGKGQLENAQKILAEMERDSIT 800
Query: 339 PDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNN 391
P++ Y +++ + A +++ A + + G PN TY LI G K N
Sbjct: 801 PNVPIYNALIAGHFKAGNLQEAFRLHNEMLDKGLTPNDTTYDILINGKIKGGN 853
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 86/351 (24%), Positives = 150/351 (42%), Gaps = 26/351 (7%)
Query: 125 KGYAPSVVSHTALMEAYGRGGR-YKNAEAIFRRMQS--SGPRPSALTYQIILKLFVEANK 181
+G+ S+ S L+ R K A+ + R S SGP P+ I++ F+ + K
Sbjct: 112 RGFVRSLDSLCVLLHILTRSSETLKQAQNLLNRFISGDSGPMPN-----ILVDHFIGSTK 166
Query: 182 FKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVT 241
+ D ++++ ++ Y KA A F + E +
Sbjct: 167 ---------------RFDFDSDIRIYNYLLNSYIKANKLNDAIGCFNRLVESDIVPWIKF 211
Query: 242 YNSLMSFETN---YKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEML 298
N L++ E ++Y++M G+ D + +++ A K EEEA F E
Sbjct: 212 LNFLLTALVKNDMIYEAREVYEKMVLKGVHGDCFTVHIMMRANLKDNNEEEAKKFFLEAK 271
Query: 299 DAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDME 358
GV+ AY+I++ AF + V+ A + K MR P ++T+++ A V +M
Sbjct: 272 SRGVKLDAAAYSIVIQAFCKNLDVELACGLLKDMRDKGWVPSEGTFTSVIGACVKQGNMV 331
Query: 359 GAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIM 418
A + + G NV+ TL+KGY K + L +E +DKM NG PN+ + ++
Sbjct: 332 EALRLKDEMVSCGVQMNVVVATTLVKGYCKQDKLVSALEFFDKMNENGPSPNRVTYAVLI 391
Query: 419 DAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELL 469
+ KN + A Y +M++ P N L+ + R EA++L
Sbjct: 392 EWCCKNGNMAKAYDLYTQMKNKNICPTVFIVNSLIRGFLKVESREEASKLF 442
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 101/226 (44%), Gaps = 2/226 (0%)
Query: 263 QRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMV 322
+R D+ Y L+N+Y KA + +A+ F ++++ + P K N LL A + M+
Sbjct: 166 KRFDFDSDIRIYNYLLNSYIKANKLNDAIGCFNRLVESDIVPWIKFLNFLLTALVKNDMI 225
Query: 323 DQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTL 382
+AR V++ M D + M+ A + ++ E A+KFF K G + Y +
Sbjct: 226 YEAREVYEKMVLKGVHGDCFTVHIMMRANLKDNNEEEAKKFFLEAKSRGVKLDAAAYSIV 285
Query: 383 IKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGF 442
I+ + K ++E + MR G P++ FT+++ A K + A+ EM SCG
Sbjct: 286 IQAFCKNLDVELACGLLKDMRDKGWVPSEGTFTSVIGACVKQGNMVEALRLKDEMVSCGV 345
Query: 443 PPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGINGLSISV 488
+ L+ D+ A E N N P N ++ +V
Sbjct: 346 QMNVVVATTLVKGYCKQDKLVSALEFFDKMNE--NGPSPNRVTYAV 389
>gi|242033891|ref|XP_002464340.1| hypothetical protein SORBIDRAFT_01g016560 [Sorghum bicolor]
gi|241918194|gb|EER91338.1| hypothetical protein SORBIDRAFT_01g016560 [Sorghum bicolor]
Length = 758
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 115/460 (25%), Positives = 204/460 (44%), Gaps = 27/460 (5%)
Query: 7 RKFMQKRRKVEVFKDAAD-------------EAGKKNWRRLMNQIEEVGSAVAVLRS--E 51
R F++ ++ F DA D +A + L+N + E GS + +L S
Sbjct: 128 RSFVESYARLRRFDDAVDLVLNQLDNDTFGVQADTVVFNHLLNVLVE-GSKLKLLESVYN 186
Query: 52 RTRGQPLPKDLV-LGTLVRLKQLKKWNVVSEVLEWLRIQSWWDF--NEMDFLMLITAYGK 108
G+ + D+V L TL+ K L + + V + L S +E F L+ + +
Sbjct: 187 EMTGRGIQPDVVTLNTLI--KALCRAHQVRTAVLMLEEMSSHGVAPDETTFTTLMQGFIE 244
Query: 109 QGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALT 168
+G A +V + M + G +P+ V+ L+ Y + GR ++A ++ + G P +T
Sbjct: 245 EGSIEAALRVKAKMMEAGCSPTGVTVNVLINGYCKMGRVEDALGYIQQEIADGFEPDQVT 304
Query: 169 YQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFA 228
Y + + A +V +L E P D ++ +I K G ++A+ +
Sbjct: 305 YNTFVHGLCQNGHVSHALKVMDLMLQEGHDP---DVFTYNTVINCLSKNGELDEAKGIVN 361
Query: 229 LMAERGVQQSTVTYNSL---MSFETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKAR 285
M +RG T T+N+L +S + +E + ++ GL PDV ++ +LINA K
Sbjct: 362 QMVDRGCLPDTTTFNTLIVALSSQNRLEEALDLARELTVKGLSPDVYTFNILINALCKVG 421
Query: 286 REEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYT 345
+ +FEEM +G P YNIL+D G + A + M + C +Y
Sbjct: 422 DPHLGIRLFEEMKSSGCTPDEVTYNILIDHLCSMGKLGNALDLLNEMESNGCPRSTVTYN 481
Query: 346 TMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVN 405
T++ A +E AE+ F ++ G + +T+ TLI G K ++ E+ ++M
Sbjct: 482 TIIDALCKKMRIEEAEEVFDQMDAQGISRSAVTFNTLIDGLCKAKRIDDATELIEQMVKE 541
Query: 406 GIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPD 445
G++PN + +I+ Y K + A + M + GF D
Sbjct: 542 GLQPNNITYNSILTHYCKQGNIKKAADILETMTANGFEID 581
Score = 145 bits (365), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 105/450 (23%), Positives = 198/450 (44%), Gaps = 13/450 (2%)
Query: 28 KKNWRRLMNQIEEVGSAVAVLR--SERTRGQPLPKDLVLGTLVRLKQLKKWNVVSEVLEW 85
+ + LM E GS A LR ++ P + + L+ K V + L +
Sbjct: 232 ETTFTTLMQGFIEEGSIEAALRVKAKMMEAGCSPTGVTVNVLI--NGYCKMGRVEDALGY 289
Query: 86 LR--IQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGR 143
++ I ++ +++ + + + G + A KV+ M ++G+ P V ++ ++ +
Sbjct: 290 IQQEIADGFEPDQVTYNTFVHGLCQNGHVSHALKVMDLMLQEGHDPDVFTYNTVINCLSK 349
Query: 144 GGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPD 203
G A+ I +M G P T+ ++ N+ +EA ++ L L PD
Sbjct: 350 NGELDEAKGIVNQMVDRGCLPDTTTFNTLIVALSSQNRLEEALDLAREL---TVKGLSPD 406
Query: 204 QKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSKIYD--- 260
F+++I K G +LF M G VTYN L+ + ++ D
Sbjct: 407 VYTFNILINALCKVGDPHLGIRLFEEMKSSGCTPDEVTYNILIDHLCSMGKLGNALDLLN 466
Query: 261 QMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISG 320
+M+ G V+Y +I+A K R EEA VF++M G+ + +N L+D +
Sbjct: 467 EMESNGCPRSTVTYNTIIDALCKKMRIEEAEEVFDQMDAQGISRSAVTFNTLIDGLCKAK 526
Query: 321 MVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYG 380
+D A + + M ++ P+ +Y ++L+ Y +++ A + +GF +V+TYG
Sbjct: 527 RIDDATELIEQMVKEGLQPNNITYNSILTHYCKQGNIKKAADILETMTANGFEIDVVTYG 586
Query: 381 TLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESC 440
TLI G K + +++ MR+ GI+P + ++ + + + A+ ++EM
Sbjct: 587 TLINGLCKAGRTQVALKLLRGMRIKGIRPTPKAYNPVIQSLFRRNNLRDALNLFREMTEV 646
Query: 441 GFPPDQKAKNILL-SLAKTADERNEANELL 469
G PPD I+ SL + EA + L
Sbjct: 647 GEPPDALTYKIVFRSLCRGGGPIKEAFDFL 676
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 90/380 (23%), Positives = 176/380 (46%), Gaps = 13/380 (3%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNA-EAIFRRMQSS 160
++ G G F+ E ++ M ++G+ V + +E+Y R R+ +A + + ++ +
Sbjct: 95 IVQKLGTAGAFDLMEGLVREMRREGHQVRAVVVRSFVESYARLRRFDDAVDLVLNQLDND 154
Query: 161 --GPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAG 218
G + + + +L + VE +K K E V+ + ++PD + +I +A
Sbjct: 155 TFGVQADTVVFNHLLNVLVEGSKLKLLESVYNEMTGRG---IQPDVVTLNTLIKALCRAH 211
Query: 219 GYEKARKLFALMAERGVQQSTVTYNSLMSF---ETNYKEVSKIYDQMQRAGLQPDVVSYA 275
A + M+ GV T+ +LM E + + ++ +M AG P V+
Sbjct: 212 QVRTAVLMLEEMSSHGVAPDETTFTTLMQGFIEEGSIEAALRVKAKMMEAGCSPTGVTVN 271
Query: 276 LLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRD 335
+LIN Y K R E+AL ++ + G P YN + +G V A V M ++
Sbjct: 272 VLINGYCKMGRVEDALGYIQQEIADGFEPDQVTYNTFVHGLCQNGHVSHALKVMDLMLQE 331
Query: 336 RCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKM 395
PD+ +Y T+++ +++ A+ ++ G +P+ T+ TLI + N LE+
Sbjct: 332 GHDPDVFTYNTVINCLSKNGELDEAKGIVNQMVDRGCLPDTTTFNTLIVALSSQNRLEEA 391
Query: 396 MEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILL-- 453
+++ ++ V G+ P+ F +++A K D + ++EM+S G PD+ NIL+
Sbjct: 392 LDLARELTVKGLSPDVYTFNILINALCKVGDPHLGIRLFEEMKSSGCTPDEVTYNILIDH 451
Query: 454 --SLAKTADERNEANELLGN 471
S+ K + + NE+ N
Sbjct: 452 LCSMGKLGNALDLLNEMESN 471
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 86/371 (23%), Positives = 159/371 (42%), Gaps = 39/371 (10%)
Query: 102 LITAYGKQGDFNKAEKVL-SFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSS 160
L+ A +Q D A ++L S + ++ +APS + +++ G G + E + R M+
Sbjct: 59 LLAALREQSDPEAALRMLNSALAREDFAPSSAVYEEIVQKLGTAGAFDLMEGLVREMRRE 118
Query: 161 GPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGY 220
G + A+ + ++ + +F +A ++ + LD +
Sbjct: 119 GHQVRAVVVRSFVESYARLRRFDDAVDLVLNQLDNDTF---------------------- 156
Query: 221 EKARKLFALMAERGVQQSTVTYNSLMSF---ETNYKEVSKIYDQMQRAGLQPDVVSYALL 277
GVQ TV +N L++ + K + +Y++M G+QPDVV+ L
Sbjct: 157 -------------GVQADTVVFNHLLNVLVEGSKLKLLESVYNEMTGRGIQPDVVTLNTL 203
Query: 278 INAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRC 337
I A +A + A+ + EEM GV P + L+ F G ++ A V M C
Sbjct: 204 IKALCRAHQVRTAVLMLEEMSSHGVAPDETTFTTLMQGFIEEGSIEAALRVKAKMMEAGC 263
Query: 338 SPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMME 397
SP + +++ Y +E A + ++ DGF P+ +TY T + G + ++ ++
Sbjct: 264 SPTGVTVNVLINGYCKMGRVEDALGYIQQEIADGFEPDQVTYNTFVHGLCQNGHVSHALK 323
Query: 398 IYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAK 457
+ D M G P+ + T+++ KN + D A +M G PD N L+
Sbjct: 324 VMDLMLQEGHDPDVFTYNTVINCLSKNGELDEAKGIVNQMVDRGCLPDTTTFNTLIVALS 383
Query: 458 TADERNEANEL 468
+ + EA +L
Sbjct: 384 SQNRLEEALDL 394
>gi|115461911|ref|NP_001054555.1| Os05g0132000 [Oryza sativa Japonica Group]
gi|52353663|gb|AAU44229.1| hypothetical protein [Oryza sativa Japonica Group]
gi|113578106|dbj|BAF16469.1| Os05g0132000 [Oryza sativa Japonica Group]
gi|125550727|gb|EAY96436.1| hypothetical protein OsI_18334 [Oryza sativa Indica Group]
Length = 637
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 110/439 (25%), Positives = 194/439 (44%), Gaps = 16/439 (3%)
Query: 49 RSERTRGQPLPKDLVL---GTLVRLKQLKKWNVVSEVLEWLRIQSWWDFNEMDFLMLITA 105
R+ER R P D T+ RL + V L+ +R++ E + I A
Sbjct: 37 RTERPRPDPGSGDSARHHEATVRRLAAAGDVDGVQYALQEMRLRGV-ACTEDALVAAIGA 95
Query: 106 YGKQGDFNKAEKVLSFMNKKGYA-PSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRP 164
+ + G ++A K + G P V + L++A R ++ M+ +G P
Sbjct: 96 FARAGSADRALKTFYRASDLGCRDPGVRVYNHLLDALLRENMVGAVVPVYDNMRKAGVDP 155
Query: 165 SALTYQIILKLFVEANKFKEAEEVFMTLLDE-EKSPLKPDQKMFHMMIYMYKKAGGYEKA 223
+ TY ++++ + ++ A + +LDE + PD+ ++ K G E+A
Sbjct: 156 NVYTYNLLIRALCQNDRVDAARK----MLDEMSRKGCHPDEVSHGTIVSGMCKLGRVEEA 211
Query: 224 RKLFALMAERGVQQSTVTYNSLMSFETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGK 283
R A VQ S + E EV + ++M + GLQP+VV+Y +++A+ K
Sbjct: 212 RGFLAETVP--VQASYNAVVHALCGEFRMWEVFSVVNEMVQRGLQPNVVTYTTIVDAFCK 269
Query: 284 ARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICS 343
AR A A+ M+ G P + L+ F G V A +++ M + +P S
Sbjct: 270 ARELRMACAILARMVSMGCTPNVLTFTALVKGFFEDGKVHDALSMWHWMVDEGWAPSTIS 329
Query: 344 YTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMR 403
Y ++ D++GA FF +K++ +PN TY TL+ G++ +L+ M I+++M+
Sbjct: 330 YNVLIRGLCCIGDLKGALDFFNSMKRNALLPNATTYSTLVDGFSNAGDLDGAMLIWNEMK 389
Query: 404 VNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLS----LAKTA 459
+G KPN ++T ++D K FD A +M PP+ N L+ +
Sbjct: 390 SSGCKPNVVVYTNMIDVLCKKMMFDQAESLIDKMLMDNCPPNTVTFNTLIGRLCDCGRVG 449
Query: 460 DERNEANELLGNFNHPNNE 478
N + + N HPN+
Sbjct: 450 RALNVFHGMRRNGCHPNDR 468
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 90/350 (25%), Positives = 169/350 (48%), Gaps = 8/350 (2%)
Query: 110 GDFNKAE--KVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSAL 167
G+F E V++ M ++G P+VV++T +++A+ + + A AI RM S G P+ L
Sbjct: 234 GEFRMWEVFSVVNEMVQRGLQPNVVTYTTIVDAFCKARELRMACAILARMVSMGCTPNVL 293
Query: 168 TYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLF 227
T+ ++K F E K +A ++ ++DE +P ++++I G + A F
Sbjct: 294 TFTALVKGFFEDGKVHDALSMWHWMVDEGWAP---STISYNVLIRGLCCIGDLKGALDFF 350
Query: 228 ALMAERGVQQSTVTYNSLMSFETNYKEVSK---IYDQMQRAGLQPDVVSYALLINAYGKA 284
M + + TY++L+ +N ++ I+++M+ +G +P+VV Y +I+ K
Sbjct: 351 NSMKRNALLPNATTYSTLVDGFSNAGDLDGAMLIWNEMKSSGCKPNVVVYTNMIDVLCKK 410
Query: 285 RREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSY 344
++A ++ ++ML P +N L+ G V +A VF MRR+ C P+ +Y
Sbjct: 411 MMFDQAESLIDKMLMDNCPPNTVTFNTLIGRLCDCGRVGRALNVFHGMRRNGCHPNDRTY 470
Query: 345 TTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRV 404
+L + + A + +GF +++TY T+I ++ + M + +M V
Sbjct: 471 NELLHGLFREGNHKDAFAMVIEMLNNGFELSLVTYNTVINCLCQMCMRKHAMLLLGRMMV 530
Query: 405 NGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLS 454
GI+P+ F I+ AY K A +M + P + A IL+S
Sbjct: 531 QGIQPDAFTFNAIIHAYCKEGKVSIAACLLGQMNAVNCPRNVVAYTILIS 580
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 88/384 (22%), Positives = 156/384 (40%), Gaps = 17/384 (4%)
Query: 93 DFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEA 152
D N + +LI A + + A K+L M++KG P VSH ++ + GR + A
Sbjct: 154 DPNVYTYNLLIRALCQNDRVDAARKMLDEMSRKGCHPDEVSHGTIVSGMCKLGRVEEARG 213
Query: 153 IFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIY 212
P +Y ++ +F+ EVF + + + L+P+ + ++
Sbjct: 214 FLAETV-----PVQASYNAVVHAL--CGEFR-MWEVFSVVNEMVQRGLQPNVVTYTTIVD 265
Query: 213 MYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSKIYDQ------MQRAG 266
+ KA A + A M G + +T+ +L+ + E K++D M G
Sbjct: 266 AFCKARELRMACAILARMVSMGCTPNVLTFTALVK---GFFEDGKVHDALSMWHWMVDEG 322
Query: 267 LQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQAR 326
P +SY +LI + AL F M + P Y+ L+D F+ +G +D A
Sbjct: 323 WAPSTISYNVLIRGLCCIGDLKGALDFFNSMKRNALLPNATTYSTLVDGFSNAGDLDGAM 382
Query: 327 TVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGY 386
++ M+ C P++ YT M+ + AE ++ D PN +T+ TLI
Sbjct: 383 LIWNEMKSSGCKPNVVVYTNMIDVLCKKMMFDQAESLIDKMLMDNCPPNTVTFNTLIGRL 442
Query: 387 AKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQ 446
+ + + ++ MR NG PN + ++ + + A EM + GF
Sbjct: 443 CDCGRVGRALNVFHGMRRNGCHPNDRTYNELLHGLFREGNHKDAFAMVIEMLNNGFELSL 502
Query: 447 KAKNILLSLAKTADERNEANELLG 470
N +++ R A LLG
Sbjct: 503 VTYNTVINCLCQMCMRKHAMLLLG 526
Score = 105 bits (263), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 65/305 (21%), Positives = 133/305 (43%), Gaps = 7/305 (2%)
Query: 84 EWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGR 143
W+ + W + + + +LI GD A + M + P+ +++ L++ +
Sbjct: 316 HWM-VDEGWAPSTISYNVLIRGLCCIGDLKGALDFFNSMKRNALLPNATTYSTLVDGFSN 374
Query: 144 GGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPD 203
G A I+ M+SSG +P+ + Y ++ + + F +AE + +L + P+
Sbjct: 375 AGDLDGAMLIWNEMKSSGCKPNVVVYTNMIDVLCKKMMFDQAESLIDKMLMDN---CPPN 431
Query: 204 QKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSF---ETNYKEVSKIYD 260
F+ +I G +A +F M G + TYN L+ E N+K+ +
Sbjct: 432 TVTFNTLIGRLCDCGRVGRALNVFHGMRRNGCHPNDRTYNELLHGLFREGNHKDAFAMVI 491
Query: 261 QMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISG 320
+M G + +V+Y +IN + + A+ + M+ G++P +N ++ A+ G
Sbjct: 492 EMLNNGFELSLVTYNTVINCLCQMCMRKHAMLLLGRMMVQGIQPDAFTFNAIIHAYCKEG 551
Query: 321 MVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYG 380
V A + M C ++ +YT ++S N + A + ++ +G PN T+
Sbjct: 552 KVSIAACLLGQMNAVNCPRNVVAYTILISELCNQGKLSNAMVYLLKMLYEGICPNEATWN 611
Query: 381 TLIKG 385
L++
Sbjct: 612 VLVRA 616
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 78/385 (20%), Positives = 159/385 (41%), Gaps = 8/385 (2%)
Query: 72 QLKKWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSV 131
+ + W V S V E +Q N + + ++ A+ K + A +L+ M G P+V
Sbjct: 235 EFRMWEVFSVVNEM--VQRGLQPNVVTYTTIVDAFCKARELRMACAILARMVSMGCTPNV 292
Query: 132 VSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMT 191
++ TAL++ + G+ +A +++ M G PS ++Y ++++ K A + F +
Sbjct: 293 LTFTALVKGFFEDGKVHDALSMWHWMVDEGWAPSTISYNVLIRGLCCIGDLKGALDFFNS 352
Query: 192 LLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETN 251
+ +++ L P+ + ++ + AG + A ++ M G + + V Y +++
Sbjct: 353 M---KRNALLPNATTYSTLVDGFSNAGDLDGAMLIWNEMKSSGCKPNVVVYTNMIDVLCK 409
Query: 252 ---YKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKA 308
+ + + D+M P+ V++ LI R AL VF M G P +
Sbjct: 410 KMMFDQAESLIDKMLMDNCPPNTVTFNTLIGRLCDCGRVGRALNVFHGMRRNGCHPNDRT 469
Query: 309 YNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLK 368
YN LL G A + M + + +Y T+++ + A R+
Sbjct: 470 YNELLHGLFREGNHKDAFAMVIEMLNNGFELSLVTYNTVINCLCQMCMRKHAMLLLGRMM 529
Query: 369 QDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFD 428
G P+ T+ +I Y K + + +M N +T ++
Sbjct: 530 VQGIQPDAFTFNAIIHAYCKEGKVSIAACLLGQMNAVNCPRNVVAYTILISELCNQGKLS 589
Query: 429 SAVVWYKEMESCGFPPDQKAKNILL 453
+A+V+ +M G P++ N+L+
Sbjct: 590 NAMVYLLKMLYEGICPNEATWNVLV 614
Score = 99.4 bits (246), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 79/334 (23%), Positives = 140/334 (41%), Gaps = 8/334 (2%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + F L+ + + G + A + +M +G+APS +S+ L+ G K A F
Sbjct: 291 NVLTFTALVKGFFEDGKVHDALSMWHWMVDEGWAPSTISYNVLIRGLCCIGDLKGALDFF 350
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSP-LKPDQKMFHMMIYM 213
M+ + P+A TY ++ F A A M + +E KS KP+ ++ MI +
Sbjct: 351 NSMKRNALLPNATTYSTLVDGFSNAGDLDGA----MLIWNEMKSSGCKPNVVVYTNMIDV 406
Query: 214 YKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSK---IYDQMQRAGLQPD 270
K +++A L M +TVT+N+L+ + V + ++ M+R G P+
Sbjct: 407 LCKKMMFDQAESLIDKMLMDNCPPNTVTFNTLIGRLCDCGRVGRALNVFHGMRRNGCHPN 466
Query: 271 VVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFK 330
+Y L++ + ++A A+ EML+ G + YN +++ M A +
Sbjct: 467 DRTYNELLHGLFREGNHKDAFAMVIEMLNNGFELSLVTYNTVINCLCQMCMRKHAMLLLG 526
Query: 331 CMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVN 390
M PD ++ ++ AY + A ++ NV+ Y LI
Sbjct: 527 RMMVQGIQPDAFTFNAIIHAYCKEGKVSIAACLLGQMNAVNCPRNVVAYTILISELCNQG 586
Query: 391 NLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKN 424
L M KM GI PN+ + ++ A N
Sbjct: 587 KLSNAMVYLLKMLYEGICPNEATWNVLVRAIFTN 620
>gi|356524676|ref|XP_003530954.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At1g12700, mitochondrial-like
[Glycine max]
Length = 555
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 92/380 (24%), Positives = 182/380 (47%), Gaps = 7/380 (1%)
Query: 92 WDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAE 151
+ +E + LI K G A ++L M + P++++++ +++ + +A
Sbjct: 156 YPLDEFSYGSLINGLCKNGQTRDALQLLQKMEEDLVRPNLITYSTVIDGLCKDRLIADAL 215
Query: 152 AIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMI 211
+F + S G + Y ++ +++EA + ++ + + PD F++++
Sbjct: 216 RLFSLVTSRGILVDVVAYNSLIHGCCSVGQWREATRLLTMMV---RGNINPDDYTFNILV 272
Query: 212 YMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLM---SFETNYKEVSKIYDQMQRAGLQ 268
K G +A+ +FA+M +RG + VTYN+LM N E +++++M + GL+
Sbjct: 273 DALCKEGRIVEAQGVFAVMMKRGEKPDIVTYNALMEGFCLSNNVSEARELFNRMVKRGLE 332
Query: 269 PDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTV 328
PDV++Y +LIN Y K +EA+ +F+E+ + P YN L+D G + + +
Sbjct: 333 PDVLNYNVLINGYCKIDMVDEAMVLFKEIRCKNLVPNLATYNSLIDGLCKLGRMSCVQEL 392
Query: 329 FKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAK 388
M SPDI +Y L A+ + E A FR++ Q G P+ Y +++ + K
Sbjct: 393 VDEMCDRGQSPDIVTYNIFLDAFCKSKPYEKAISLFRQIVQ-GIWPDFYMYDVIVENFCK 451
Query: 389 VNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKA 448
L+ E + ++G PN +T +++A K+ FD A+ +M+ PPD
Sbjct: 452 GEKLKIAEEALQHLLIHGCCPNVRTYTIMINALCKDCSFDEAMTLLSKMDDNDCPPDAVT 511
Query: 449 KNILLSLAKTADERNEANEL 468
++ + +E ++A +L
Sbjct: 512 FETIIGALQERNETDKAEKL 531
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 94/402 (23%), Positives = 187/402 (46%), Gaps = 7/402 (1%)
Query: 101 MLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSS 160
+LI Y Q + A +L + K G+ P++V+ L+ + G A A + +
Sbjct: 95 ILINCYCHQAHLSFAFSLLGTILKMGFQPNMVTFNTLINGFCINGMVSKAMAFRLDLMAK 154
Query: 161 GPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGY 220
G +Y ++ + + ++A ++ + E+ ++P+ + +I K
Sbjct: 155 GYPLDEFSYGSLINGLCKNGQTRDALQLLQKM---EEDLVRPNLITYSTVIDGLCKDRLI 211
Query: 221 EKARKLFALMAERGVQQSTVTYNSLMSFETN---YKEVSKIYDQMQRAGLQPDVVSYALL 277
A +LF+L+ RG+ V YNSL+ + ++E +++ M R + PD ++ +L
Sbjct: 212 ADALRLFSLVTSRGILVDVVAYNSLIHGCCSVGQWREATRLLTMMVRGNINPDDYTFNIL 271
Query: 278 INAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRC 337
++A K R EA VF M+ G +P YN L++ F +S V +AR +F M +
Sbjct: 272 VDALCKEGRIVEAQGVFAVMMKRGEKPDIVTYNALMEGFCLSNNVSEARELFNRMVKRGL 331
Query: 338 SPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMME 397
PD+ +Y +++ Y ++ A F+ ++ VPN+ TY +LI G K+ + + E
Sbjct: 332 EPDVLNYNVLINGYCKIDMVDEAMVLFKEIRCKNLVPNLATYNSLIDGLCKLGRMSCVQE 391
Query: 398 IYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAK 457
+ D+M G P+ + +DA+ K+K ++ A+ ++++ G PD ++++
Sbjct: 392 LVDEMCDRGQSPDIVTYNIFLDAFCKSKPYEKAISLFRQIVQ-GIWPDFYMYDVIVENFC 450
Query: 458 TADERNEANELLGNFNHPNNEPGINGLSISVDEEDDDDDDDE 499
++ A E L + P + +I ++ D DE
Sbjct: 451 KGEKLKIAEEALQHLLIHGCCPNVRTYTIMINALCKDCSFDE 492
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 71/279 (25%), Positives = 131/279 (46%), Gaps = 9/279 (3%)
Query: 99 FLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQ 158
F +L+ A K+G +A+ V + M K+G P +V++ ALME + A +F RM
Sbjct: 268 FNILVDALCKEGRIVEAQGVFAVMMKRGEKPDIVTYNALMEGFCLSNNVSEARELFNRMV 327
Query: 159 SSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSP-LKPDQKMFHMMIYMYKKA 217
G P L Y +++ + + + EA M L E + L P+ ++ +I K
Sbjct: 328 KRGLEPDVLNYNVLINGYCKIDMVDEA----MVLFKEIRCKNLVPNLATYNSLIDGLCKL 383
Query: 218 GGYEKARKLFALMAERGVQQSTVTYNSLM-SFETN--YKEVSKIYDQMQRAGLQPDVVSY 274
G ++L M +RG VTYN + +F + Y++ ++ Q+ + G+ PD Y
Sbjct: 384 GRMSCVQELVDEMCDRGQSPDIVTYNIFLDAFCKSKPYEKAISLFRQIVQ-GIWPDFYMY 442
Query: 275 ALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRR 334
+++ + K + + A + +L G P + Y I+++A D+A T+ M
Sbjct: 443 DVIVENFCKGEKLKIAEEALQHLLIHGCCPNVRTYTIMINALCKDCSFDEAMTLLSKMDD 502
Query: 335 DRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFV 373
+ C PD ++ T++ A ++ + AEK + + G V
Sbjct: 503 NDCPPDAVTFETIIGALQERNETDKAEKLRLEMIERGLV 541
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 65/322 (20%), Positives = 129/322 (40%), Gaps = 3/322 (0%)
Query: 181 KFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTV 240
KF ++ ++ + P +F ++ + G Y A LF+ + +G+ S
Sbjct: 32 KFHTVDDTLLSFNRMLRKHPPPPIFVFDKLLGAIVRMGHYPTAISLFSQLHSKGITPSIA 91
Query: 241 TYNSLMSFETNYKEVS---KIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEM 297
T L++ + +S + + + G QP++V++ LIN + +A+A ++
Sbjct: 92 TLTILINCYCHQAHLSFAFSLLGTILKMGFQPNMVTFNTLINGFCINGMVSKAMAFRLDL 151
Query: 298 LDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDM 357
+ G +Y L++ +G A + + M D P++ +Y+T++ +
Sbjct: 152 MAKGYPLDEFSYGSLINGLCKNGQTRDALQLLQKMEEDLVRPNLITYSTVIDGLCKDRLI 211
Query: 358 EGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTI 417
A + F + G + +V+ Y +LI G V + + M I P+ F +
Sbjct: 212 ADALRLFSLVTSRGILVDVVAYNSLIHGCCSVGQWREATRLLTMMVRGNINPDDYTFNIL 271
Query: 418 MDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNN 477
+DA K A + M G PD N L+ ++ +EA EL
Sbjct: 272 VDALCKEGRIVEAQGVFAVMMKRGEKPDIVTYNALMEGFCLSNNVSEARELFNRMVKRGL 331
Query: 478 EPGINGLSISVDEEDDDDDDDE 499
EP + ++ ++ D DE
Sbjct: 332 EPDVLNYNVLINGYCKIDMVDE 353
>gi|449438586|ref|XP_004137069.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g11690-like [Cucumis sativus]
Length = 505
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 101/375 (26%), Positives = 187/375 (49%), Gaps = 12/375 (3%)
Query: 74 KKWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVS 133
+ W +E L R Q F+ F + I A+ + G+ +K ++L+ M G +P+V
Sbjct: 91 RTWGFFTEYLG--RTQ----FDVYSFGITIKAFCENGNVSKGFELLAQMETMGVSPNVFI 144
Query: 134 HTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLL 193
+T L+EA R G A+ +F RM G + Y I++ F + K+ E++ +
Sbjct: 145 YTILIEACCRNGDIDQAKVMFSRMDDLGLAANQYIYTIMINGFFKKGYKKDGFELYQKM- 203
Query: 194 DEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYK 253
+ + P+ ++ +I Y + G A K+F +++RGV + VTYN L+
Sbjct: 204 --KLVGVLPNLYTYNSLITEYCRDGKLSLAFKVFDEISKRGVACNAVTYNILIGGLCRKG 261
Query: 254 EVSK---IYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYN 310
+VSK + ++M+RA + P ++ +L++ + ++AL+ E++ G+ PT YN
Sbjct: 262 QVSKAEGLLERMKRAHINPTTRTFNMLMDGLCNTGQLDKALSYLEKLKLIGLCPTLVTYN 321
Query: 311 ILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQD 370
IL+ F+ G + + M SP +YT +++ +V + D+E A + F +K+
Sbjct: 322 ILISGFSKVGNSSVVSELVREMEDRGISPSKVTYTILMNTFVRSDDIEKAYEMFHLMKRI 381
Query: 371 GFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSA 430
G VP+ TYG LI G N+ + ++Y M ++PN I+ T+++ Y K + A
Sbjct: 382 GLVPDQHTYGVLIHGLCIKGNMVEASKLYKSMVEMHLQPNDVIYNTMINGYCKECNSYKA 441
Query: 431 VVWYKEMESCGFPPD 445
+ + +EM G P+
Sbjct: 442 LKFLEEMVKNGVTPN 456
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 82/351 (23%), Positives = 161/351 (45%), Gaps = 7/351 (1%)
Query: 121 FMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEAN 180
M KG++PS S ++ + G F + ++ I +K F E
Sbjct: 63 LMVLKGHSPSSFSFNNALDLLAKSGNLDRTWGFFTEYLGR-TQFDVYSFGITIKAFCENG 121
Query: 181 KFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTV 240
+ E+ L E + P+ ++ ++I + G ++A+ +F+ M + G+ +
Sbjct: 122 NVSKGFEL---LAQMETMGVSPNVFIYTILIEACCRNGDIDQAKVMFSRMDDLGLAANQY 178
Query: 241 TYNSLMS--FETNYKEVS-KIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEM 297
Y +++ F+ YK+ ++Y +M+ G+ P++ +Y LI Y + + A VF+E+
Sbjct: 179 IYTIMINGFFKKGYKKDGFELYQKMKLVGVLPNLYTYNSLITEYCRDGKLSLAFKVFDEI 238
Query: 298 LDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDM 357
GV YNIL+ G V +A + + M+R +P ++ ++ N +
Sbjct: 239 SKRGVACNAVTYNILIGGLCRKGQVSKAEGLLERMKRAHINPTTRTFNMLMDGLCNTGQL 298
Query: 358 EGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTI 417
+ A + +LK G P ++TY LI G++KV N + E+ +M GI P++ +T +
Sbjct: 299 DKALSYLEKLKLIGLCPTLVTYNILISGFSKVGNSSVVSELVREMEDRGISPSKVTYTIL 358
Query: 418 MDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANEL 468
M+ + ++ D + A + M+ G PDQ +L+ EA++L
Sbjct: 359 MNTFVRSDDIEKAYEMFHLMKRIGLVPDQHTYGVLIHGLCIKGNMVEASKL 409
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 76/329 (23%), Positives = 154/329 (46%), Gaps = 6/329 (1%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N+ + ++I + K+G ++ M G P++ ++ +L+ Y R G+ A +F
Sbjct: 176 NQYIYTIMINGFFKKGYKKDGFELYQKMKLVGVLPNLYTYNSLITEYCRDGKLSLAFKVF 235
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
+ G +A+TY I++ + +AE + + +++ + P + F+M++
Sbjct: 236 DEISKRGVACNAVTYNILIGGLCRKGQVSKAEGLLERM---KRAHINPTTRTFNMLMDGL 292
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFET---NYKEVSKIYDQMQRAGLQPDV 271
G +KA + G+ + VTYN L+S + N VS++ +M+ G+ P
Sbjct: 293 CNTGQLDKALSYLEKLKLIGLCPTLVTYNILISGFSKVGNSSVVSELVREMEDRGISPSK 352
Query: 272 VSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKC 331
V+Y +L+N + ++ E+A +F M G+ P Y +L+ I G + +A ++K
Sbjct: 353 VTYTILMNTFVRSDDIEKAYEMFHLMKRIGLVPDQHTYGVLIHGLCIKGNMVEASKLYKS 412
Query: 332 MRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNN 391
M P+ Y TM++ Y + A KF + ++G PNV +Y + I+ K
Sbjct: 413 MVEMHLQPNDVIYNTMINGYCKECNSYKALKFLEEMVKNGVTPNVASYISTIQILCKDGK 472
Query: 392 LEKMMEIYDKMRVNGIKPNQTIFTTIMDA 420
+ + +M G+KP +++ + + A
Sbjct: 473 SIEAKRLLKEMTEAGLKPPESLCSKVGQA 501
Score = 58.5 bits (140), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 55/247 (22%), Positives = 100/247 (40%), Gaps = 34/247 (13%)
Query: 277 LINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQ---------ART 327
+INA +++ E++L F+ M+ G P+ ++N LD A SG +D+ RT
Sbjct: 44 VINASFQSQLLEQSLDSFKLMVLKGHSPSSFSFNNALDLLAKSGNLDRTWGFFTEYLGRT 103
Query: 328 VFK-----------C--------------MRRDRCSPDICSYTTMLSAYVNASDMEGAEK 362
F C M SP++ YT ++ A D++ A+
Sbjct: 104 QFDVYSFGITIKAFCENGNVSKGFELLAQMETMGVSPNVFIYTILIEACCRNGDIDQAKV 163
Query: 363 FFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYG 422
F R+ G N Y +I G+ K + E+Y KM++ G+ PN + +++ Y
Sbjct: 164 MFSRMDDLGLAANQYIYTIMINGFFKKGYKKDGFELYQKMKLVGVLPNLYTYNSLITEYC 223
Query: 423 KNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGIN 482
++ A + E+ G + NIL+ + ++A LL + P
Sbjct: 224 RDGKLSLAFKVFDEISKRGVACNAVTYNILIGGLCRKGQVSKAEGLLERMKRAHINPTTR 283
Query: 483 GLSISVD 489
++ +D
Sbjct: 284 TFNMLMD 290
>gi|414869157|tpg|DAA47714.1| TPA: hypothetical protein ZEAMMB73_516901 [Zea mays]
Length = 853
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 93/336 (27%), Positives = 166/336 (49%), Gaps = 11/336 (3%)
Query: 70 LKQLKKWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAP 129
LK L V +WL+ Q + + + +I G+ F +++L M++ P
Sbjct: 334 LKLLHDHTVALGFFQWLKRQPGFKHDGHTYTTMIGILGQARQFGVLKELLDEMSRAHCKP 393
Query: 130 SVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVF 189
+VV++ ++ AYGR K A +F MQ +G P +TY ++ + +A A +++
Sbjct: 394 TVVTYNRIIHAYGRANYLKEAVKVFEEMQEAGYEPDRVTYCTLIDIHAKAGYLDIAMDLY 453
Query: 190 MTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFE 249
+ ++ L PD + +M+ K G A KLF M E G + VTYN +++ +
Sbjct: 454 GRM---QEVGLSPDTFTYSVMVNCLGKGGQLAAAYKLFCEMIENGCTPNLVTYNIMIALQ 510
Query: 250 T---NYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTH 306
NY+ V K+Y MQ AG +PD ++Y++++ G +EA AVF EM P
Sbjct: 511 AKARNYENVVKLYKDMQVAGFRPDKITYSIVMEVLGHCGHLDEAEAVFIEMRRDWA-PDE 569
Query: 307 KAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRR 366
Y +L+D + +G VD+A ++ M +D P++ + ++LSA++ + + A +
Sbjct: 570 PVYGLLVDLWGKAGNVDKALGWYQAMLQDGLQPNVPTCNSLLSAFLKMNRFQDAYIVLQN 629
Query: 367 LKQDGFVPNVITYGTLIK----GYAKVNNLEKMMEI 398
+ G VP+V TY L+ G A++ ++M I
Sbjct: 630 MLARGLVPSVQTYTLLLSCCTVGQAQMGLCCQLMAI 665
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 70/240 (29%), Positives = 125/240 (52%), Gaps = 4/240 (1%)
Query: 229 LMAERGVQQSTVTYNSLMSFETNYKE---VSKIYDQMQRAGLQPDVVSYALLINAYGKAR 285
L + G + TY +++ ++ + ++ D+M RA +P VV+Y +I+AYG+A
Sbjct: 350 LKRQPGFKHDGHTYTTMIGILGQARQFGVLKELLDEMSRAHCKPTVVTYNRIIHAYGRAN 409
Query: 286 REEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYT 345
+EA+ VFEEM +AG P Y L+D A +G +D A ++ M+ SPD +Y+
Sbjct: 410 YLKEAVKVFEEMQEAGYEPDRVTYCTLIDIHAKAGYLDIAMDLYGRMQEVGLSPDTFTYS 469
Query: 346 TMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVN 405
M++ + A K F + ++G PN++TY +I AK N E ++++Y M+V
Sbjct: 470 VMVNCLGKGGQLAAAYKLFCEMIENGCTPNLVTYNIMIALQAKARNYENVVKLYKDMQVA 529
Query: 406 GIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEA 465
G +P++ ++ +M+ G D A + EM + PD+ +L+ L A ++A
Sbjct: 530 GFRPDKITYSIVMEVLGHCGHLDEAEAVFIEMRR-DWAPDEPVYGLLVDLWGKAGNVDKA 588
Score = 121 bits (304), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 80/313 (25%), Positives = 151/313 (48%), Gaps = 10/313 (3%)
Query: 168 TYQIILKLFVEANKFKEAEEVFMTLLDE-EKSPLKPDQKMFHMMIYMYKKAGGYEKARKL 226
TY ++ + +A +F V LLDE ++ KP ++ +I+ Y +A ++A K+
Sbjct: 362 TYTTMIGILGQARQFG----VLKELLDEMSRAHCKPTVVTYNRIIHAYGRANYLKEAVKV 417
Query: 227 FALMAERGVQQSTVTYNSLMSFET--NYKEVS-KIYDQMQRAGLQPDVVSYALLINAYGK 283
F M E G + VTY +L+ Y +++ +Y +MQ GL PD +Y++++N GK
Sbjct: 418 FEEMQEAGYEPDRVTYCTLIDIHAKAGYLDIAMDLYGRMQEVGLSPDTFTYSVMVNCLGK 477
Query: 284 ARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICS 343
+ A +F EM++ G P YNI++ A + + ++K M+ PD +
Sbjct: 478 GGQLAAAYKLFCEMIENGCTPNLVTYNIMIALQAKARNYENVVKLYKDMQVAGFRPDKIT 537
Query: 344 YTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMR 403
Y+ ++ + ++ AE F +++D + P+ YG L+ + K N++K + Y M
Sbjct: 538 YSIVMEVLGHCGHLDEAEAVFIEMRRD-WAPDEPVYGLLVDLWGKAGNVDKALGWYQAML 596
Query: 404 VNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTAD-ER 462
+G++PN +++ A+ K F A + + M + G P + +LLS +
Sbjct: 597 QDGLQPNVPTCNSLLSAFLKMNRFQDAYIVLQNMLARGLVPSVQTYTLLLSCCTVGQAQM 656
Query: 463 NEANELLGNFNHP 475
+L+ HP
Sbjct: 657 GLCCQLMAITGHP 669
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 58/135 (42%), Gaps = 1/135 (0%)
Query: 356 DMEGAEKFFRRLK-QDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIF 414
D A FF+ LK Q GF + TY T+I + + E+ D+M KP +
Sbjct: 339 DHTVALGFFQWLKRQPGFKHDGHTYTTMIGILGQARQFGVLKELLDEMSRAHCKPTVVTY 398
Query: 415 TTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNH 474
I+ AYG+ AV ++EM+ G+ PD+ L+ + A + A +L G
Sbjct: 399 NRIIHAYGRANYLKEAVKVFEEMQEAGYEPDRVTYCTLIDIHAKAGYLDIAMDLYGRMQE 458
Query: 475 PNNEPGINGLSISVD 489
P S+ V+
Sbjct: 459 VGLSPDTFTYSVMVN 473
>gi|115482518|ref|NP_001064852.1| Os10g0476900 [Oryza sativa Japonica Group]
gi|110289255|gb|AAP54273.2| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|110289256|gb|ABG66138.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|113639461|dbj|BAF26766.1| Os10g0476900 [Oryza sativa Japonica Group]
gi|215737151|dbj|BAG96080.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 599
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 93/344 (27%), Positives = 165/344 (47%), Gaps = 6/344 (1%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
+I K G NKA VL M G P +S L+ RGG+ +A + M+ SG
Sbjct: 178 IIRGLVKTGKANKARHVLEVMVLSGGVPDTISCNMLIAQLCRGGQLSSALQVLEDMRFSG 237
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
PS +T+ +++ + A + ++ + P + +++ + K G +
Sbjct: 238 CSPSGITFNTLIRCMFNQRMYDRAISFWK---EQLRLGWPPYEMTSTLLVDLVCKNCGPQ 294
Query: 222 KARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSK---IYDQMQRAGLQPDVVSYALLI 278
KA ++ ++ G Q VTYN+L+S ++ I ++ GL+P+ +Y +L+
Sbjct: 295 KALEVLDELSLEGCQPDVVTYNALISASCKAGRLNDAKFILTRLAAEGLEPNGTTYCILL 354
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCS 338
+A RR +E + E+M P YNI ++ F G +DQA V + M + CS
Sbjct: 355 HALCNMRRWDEVCDLLEDMNQVNRDPDVTTYNIFINYFCKYGHLDQAIDVLERMVINNCS 414
Query: 339 PDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEI 398
PDI + T+L+A +E A R ++++G+ +ITY TLI AK ++K M +
Sbjct: 415 PDIVTCNTLLNAISKKGMVEEALGIARCIRENGYKLVLITYNTLIDALAKKAEVKKAMVL 474
Query: 399 YDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGF 442
+D+M +GI P+ + +++ + K D A+ +M + GF
Sbjct: 475 FDEMLSDGISPDDITYGSLVMGFCKKDMADEALDLLNQMLTLGF 518
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 102/447 (22%), Positives = 178/447 (39%), Gaps = 49/447 (10%)
Query: 2 GMLAPRKFMQKRRKVEVFKDAADEAGKKNWRRLMNQI---EEVGSAVAVLRSERTRGQPL 58
G++ K + R +EV + + L+ Q+ ++ SA+ VL R G
Sbjct: 181 GLVKTGKANKARHVLEVMVLSGGVPDTISCNMLIAQLCRGGQLSSALQVLEDMRFSGCS- 239
Query: 59 PKDLVLGTLVR--LKQLKKWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAE 116
P + TL+R Q +S E LR+ W EM +L+ K KA
Sbjct: 240 PSGITFNTLIRCMFNQRMYDRAISFWKEQLRLG--WPPYEMTSTLLVDLVCKNCGPQKAL 297
Query: 117 KVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLF 176
+VL ++ +G P VV++ AL+ A + GR +A+ I R+ + G P+ TY I+L
Sbjct: 298 EVLDELSLEGCQPDVVTYNALISASCKAGRLNDAKFILTRLAAEGLEPNGTTYCILLHAL 357
Query: 177 VEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQ 236
++ +EV L D + PD
Sbjct: 358 CNMRRW---DEVCDLLEDMNQVNRDPD--------------------------------- 381
Query: 237 QSTVTYNSLMSFETNYKEVSKIYDQMQRA---GLQPDVVSYALLINAYGKARREEEALAV 293
TYN +++ Y + + D ++R PD+V+ L+NA K EEAL +
Sbjct: 382 --VTTYNIFINYFCKYGHLDQAIDVLERMVINNCSPDIVTCNTLLNAISKKGMVEEALGI 439
Query: 294 FEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVN 353
+ + G + YN L+DA A V +A +F M D SPD +Y +++ +
Sbjct: 440 ARCIRENGYKLVLITYNTLIDALAKKAEVKKAMVLFDEMLSDGISPDDITYGSLVMGFCK 499
Query: 354 ASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTI 413
+ A ++ GF T+ +I+ + +E EI M P ++
Sbjct: 500 KDMADEALDLLNQMLTLGFEVKTTTFVMVIQALCRDGKVEAAAEITKVMLSKNSIPGNSL 559
Query: 414 FTTIMDAYGKNKDFDSAVVWYKEMESC 440
++I+ K+ A + ++++ C
Sbjct: 560 CSSIVTKVAKSGWNKEAQMLHQKLVEC 586
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/236 (21%), Positives = 99/236 (41%)
Query: 254 EVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILL 313
+ + D+M G P+ +I K + +A V E M+ +G P + N+L+
Sbjct: 155 QACCVIDEMVLHGQIPETKCCVRIIRGLVKTGKANKARHVLEVMVLSGGVPDTISCNMLI 214
Query: 314 DAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFV 373
G + A V + MR CSP ++ T++ N + A F++ + G+
Sbjct: 215 AQLCRGGQLSSALQVLEDMRFSGCSPSGITFNTLIRCMFNQRMYDRAISFWKEQLRLGWP 274
Query: 374 PNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVW 433
P +T L+ K +K +E+ D++ + G +P+ + ++ A K + A
Sbjct: 275 PYEMTSTLLVDLVCKNCGPQKALEVLDELSLEGCQPDVVTYNALISASCKAGRLNDAKFI 334
Query: 434 YKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGINGLSISVD 489
+ + G P+ ILL +E +LL + N N +P + +I ++
Sbjct: 335 LTRLAAEGLEPNGTTYCILLHALCNMRRWDEVCDLLEDMNQVNRDPDVTTYNIFIN 390
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/224 (22%), Positives = 91/224 (40%)
Query: 258 IYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFA 317
+ + M +G PD +S +LI + + AL V E+M +G P+ +N L+
Sbjct: 194 VLEVMVLSGGVPDTISCNMLIAQLCRGGQLSSALQVLEDMRFSGCSPSGITFNTLIRCMF 253
Query: 318 ISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVI 377
M D+A + +K R P + T ++ + A + L +G P+V+
Sbjct: 254 NQRMYDRAISFWKEQLRLGWPPYEMTSTLLVDLVCKNCGPQKALEVLDELSLEGCQPDVV 313
Query: 378 TYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEM 437
TY LI K L I ++ G++PN T + ++ A + +D ++M
Sbjct: 314 TYNALISASCKAGRLNDAKFILTRLAAEGLEPNGTTYCILLHALCNMRRWDEVCDLLEDM 373
Query: 438 ESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGI 481
PD NI ++ ++A ++L N P I
Sbjct: 374 NQVNRDPDVTTYNIFINYFCKYGHLDQAIDVLERMVINNCSPDI 417
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 48/216 (22%), Positives = 86/216 (39%), Gaps = 2/216 (0%)
Query: 273 SYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCM 332
YA + Y + + +A V +EM+ G P K ++ +G ++AR V + M
Sbjct: 139 CYADNLRRYCNSGKLIQACCVIDEMVLHGQIPETKCCVRIIRGLVKTGKANKARHVLEVM 198
Query: 333 RRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNL 392
PD S +++ + A + ++ G P+ IT+ TLI+
Sbjct: 199 VLSGGVPDTISCNMLIAQLCRGGQLSSALQVLEDMRFSGCSPSGITFNTLIRCMFNQRMY 258
Query: 393 EKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNIL 452
++ + + + G P + T ++D KN A+ E+ G PD N L
Sbjct: 259 DRAISFWKEQLRLGWPPYEMTSTLLVDLVCKNCGPQKALEVLDELSLEGCQPDVVTYNAL 318
Query: 453 LSLAKTADERNEANELLGNFNHPNNEPGINGLSISV 488
+S + A N+A +L EP NG + +
Sbjct: 319 ISASCKAGRLNDAKFILTRLAAEGLEP--NGTTYCI 352
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 38/175 (21%), Positives = 69/175 (39%)
Query: 307 KAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRR 366
K Y L + SG + QA V M P+ ++ V A
Sbjct: 138 KCYADNLRRYCNSGKLIQACCVIDEMVLHGQIPETKCCVRIIRGLVKTGKANKARHVLEV 197
Query: 367 LKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKD 426
+ G VP+ I+ LI + L +++ + MR +G P+ F T++ +
Sbjct: 198 MVLSGGVPDTISCNMLIAQLCRGGQLSSALQVLEDMRFSGCSPSGITFNTLIRCMFNQRM 257
Query: 427 FDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGI 481
+D A+ ++KE G+PP + +L+ L +A E+L + +P +
Sbjct: 258 YDRAISFWKEQLRLGWPPYEMTSTLLVDLVCKNCGPQKALEVLDELSLEGCQPDV 312
>gi|297802850|ref|XP_002869309.1| hypothetical protein ARALYDRAFT_491552 [Arabidopsis lyrata subsp.
lyrata]
gi|297315145|gb|EFH45568.1| hypothetical protein ARALYDRAFT_491552 [Arabidopsis lyrata subsp.
lyrata]
Length = 1114
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 99/402 (24%), Positives = 180/402 (44%), Gaps = 42/402 (10%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N F + I G+ G N+A ++L M+ +G P VV++T L++A + A+ +F
Sbjct: 259 NVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVF 318
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
+M++ +P +TY +L F + + + + EK PD F +++
Sbjct: 319 AKMKTGRHKPDRVTYITLLDRFSDNRDLDSVNQFWSEM---EKDGHVPDVVTFTILVDAL 375
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVS---KIYDQMQRAGLQPDV 271
KAG + +A +M ++G+ + TYN+L+ + +I+D M+ G++P
Sbjct: 376 CKAGNFGEAFAKLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALEIFDNMESLGVKPTA 435
Query: 272 VSYALLINAYG-----------------------------------KARREEEALAVFEE 296
+Y + I+ YG KA R+ EA +F
Sbjct: 436 YTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYG 495
Query: 297 MLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASD 356
+ D G+ P YN+++ ++ G +D+A + M + C PD+ ++++ A
Sbjct: 496 LKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMVENCCEPDVIVVNSLINTLYKADR 555
Query: 357 MEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTT 416
++ A K F R+K+ P V+TY TL+ G K +++ +E+++ M G PN F T
Sbjct: 556 VDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNT 615
Query: 417 IMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKN-ILLSLAK 457
+ D KN + A+ +M G PD N I+ L K
Sbjct: 616 LFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVK 657
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 103/372 (27%), Positives = 165/372 (44%), Gaps = 37/372 (9%)
Query: 99 FLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQ 158
+L + +G +A L M + G+ + S+ L+ + A ++RRM
Sbjct: 158 YLTIFKCLSVKGGLRQAPFALRKMREFGFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRMI 217
Query: 159 SSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAG 218
G RPS TY L V K ++ E V L + E LKP+ F + I + +AG
Sbjct: 218 LDGFRPSLQTYS---SLMVGLGKRRDIESVMGLLKEMETLGLKPNVYTFTICIRVLGRAG 274
Query: 219 GYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSKIYDQMQRAGLQPDVVSYALLI 278
E +I +M G PDVV+Y +LI
Sbjct: 275 --------------------------------KINEAYEILKRMDDEGCGPDVVTYTVLI 302
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCS 338
+A AR+ + A VF +M +P Y LLD F+ + +D + M +D
Sbjct: 303 DALCTARKLDCAKEVFAKMKTGRHKPDRVTYITLLDRFSDNRDLDSVNQFWSEMEKDGHV 362
Query: 339 PDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEI 398
PD+ ++T ++ A A + A ++ G +PN+ TY TLI G +V+ L+ +EI
Sbjct: 363 PDVVTFTILVDALCKAGNFGEAFAKLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALEI 422
Query: 399 YDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNI-LLSLAK 457
+D M G+KP + +D YGK+ D SA+ +++M++ G P+ A N L SLAK
Sbjct: 423 FDNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAK 482
Query: 458 TADERNEANELL 469
+R EA ++
Sbjct: 483 AGRDR-EAKQIF 493
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 83/330 (25%), Positives = 160/330 (48%), Gaps = 8/330 (2%)
Query: 121 FMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEAN 180
F G P + ++ L+ + A+ +F +++++G P TY +L + ++
Sbjct: 777 FTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKNTGCIPDVATYNFLLDAYGKSG 836
Query: 181 KFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFA-LMAERGVQQST 239
K E E++ + E +P+ +++I KAG + A L+ LM++R +
Sbjct: 837 KIDELFEIYKEMSAHE---CEPNTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTA 893
Query: 240 VTYNSL---MSFETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEE 296
TY L +S E ++++ M G +P+ Y +LIN +GKA + A A+F+
Sbjct: 894 CTYGPLIDGLSKSGRLYEAKQLFEGMSDYGCRPNCAIYNILINGFGKAGEADAACALFKR 953
Query: 297 MLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASD 356
M+ GVRP K Y++L+D + G VD+ F+ ++ +PD+ Y +++
Sbjct: 954 MVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFRELKESGLNPDVVCYNLIINGLGKFHR 1013
Query: 357 MEGAEKFFRRLKQD-GFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFT 415
+E A F +K+ G P++ TY +LI +E+ +IY++++ G++PN F
Sbjct: 1014 LEEALVLFNEMKKSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFN 1073
Query: 416 TIMDAYGKNKDFDSAVVWYKEMESCGFPPD 445
++ Y + + A Y+ M + GF P+
Sbjct: 1074 ALIRGYSLSGKPEHAYAVYQTMVTGGFSPN 1103
Score = 128 bits (321), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 93/381 (24%), Positives = 175/381 (45%), Gaps = 7/381 (1%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
+ + ++ L+ + D + + S M K G+ P VV+ T L++A + G + A A
Sbjct: 329 DRVTYITLLDRFSDNRDLDSVNQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFAKL 388
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
M+ G P+ TY ++ + ++ +A E+F + E +KP + + I Y
Sbjct: 389 DVMRDQGILPNLHTYNTLICGLLRVHRLDDALEIFDNM---ESLGVKPTAYTYIVFIDYY 445
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYN-SLMSFETNYK--EVSKIYDQMQRAGLQPDV 271
K+G A + F M +G+ + V N SL S + E +I+ ++ GL PD
Sbjct: 446 GKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDS 505
Query: 272 VSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKC 331
V+Y +++ Y K +EA+ + EM++ P N L++ + VD+A +F
Sbjct: 506 VTYNMMMKCYSKVGEIDEAIKLLSEMVENCCEPDVIVVNSLINTLYKADRVDEAWKMFMR 565
Query: 332 MRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNN 391
M+ + P + +Y T+L+ ++ A + F + Q G PN IT+ TL K +
Sbjct: 566 MKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDE 625
Query: 392 LEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNI 451
+ +++ KM G P+ + TI+ KN A+ ++ +M+ +P +
Sbjct: 626 VTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMKKLVYPDFVTLCTL 685
Query: 452 LLSLAKTADERNEANELLGNF 472
L + K A +A +++ NF
Sbjct: 686 LPGVVK-AGLIEDAYKIIANF 705
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 73/304 (24%), Positives = 151/304 (49%), Gaps = 6/304 (1%)
Query: 115 AEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILK 174
A+ V + G P V ++ L++AYG+ G+ I++ M + P+ +T+ I++
Sbjct: 806 AQDVFLQVKNTGCIPDVATYNFLLDAYGKSGKIDELFEIYKEMSAHECEPNTITHNIVIS 865
Query: 175 LFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERG 234
V+A +A +++ L+ + P + +I K+G +A++LF M++ G
Sbjct: 866 GLVKAGNVDDALDLYYDLMSDRD--FSPTACTYGPLIDGLSKSGRLYEAKQLFEGMSDYG 923
Query: 235 VQQSTVTYNSLMSFETNYKEV---SKIYDQMQRAGLQPDVVSYALLINAYGKARREEEAL 291
+ + YN L++ E ++ +M + G++PD+ +Y++L++ R +E L
Sbjct: 924 CRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGL 983
Query: 292 AVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDR-CSPDICSYTTMLSA 350
F E+ ++G+ P YN++++ +++A +F M++ R +PD+ +Y +++
Sbjct: 984 HYFRELKESGLNPDVVCYNLIINGLGKFHRLEEALVLFNEMKKSRGITPDLYTYNSLILN 1043
Query: 351 YVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPN 410
A +E A K + +++ G PNV T+ LI+GY+ E +Y M G PN
Sbjct: 1044 LGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTMVTGGFSPN 1103
Query: 411 QTIF 414
+
Sbjct: 1104 TGTY 1107
Score = 125 bits (313), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 77/298 (25%), Positives = 148/298 (49%), Gaps = 8/298 (2%)
Query: 161 GPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGY 220
G +P TY +++ +EA+ + A++VF+ + + + PD ++ ++ Y K+G
Sbjct: 782 GVQPKLPTYNLLIGGLLEADMIEIAQDVFLQV---KNTGCIPDVATYNFLLDAYGKSGKI 838
Query: 221 EKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSKI----YDQMQRAGLQPDVVSYAL 276
++ +++ M+ + +T+T+N ++S V YD M P +Y
Sbjct: 839 DELFEIYKEMSAHECEPNTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGP 898
Query: 277 LINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDR 336
LI+ K+ R EA +FE M D G RP YNIL++ F +G D A +FK M ++
Sbjct: 899 LIDGLSKSGRLYEAKQLFEGMSDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEG 958
Query: 337 CSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMM 396
PD+ +Y+ ++ ++ +FR LK+ G P+V+ Y +I G K + LE+ +
Sbjct: 959 VRPDLKTYSVLVDCLCMVGRVDEGLHYFRELKESGLNPDVVCYNLIINGLGKFHRLEEAL 1018
Query: 397 EIYDKMRVN-GIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILL 453
++++M+ + GI P+ + +++ G + A Y E++ G P+ N L+
Sbjct: 1019 VLFNEMKKSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALI 1076
Score = 119 bits (299), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 76/283 (26%), Positives = 143/283 (50%), Gaps = 8/283 (2%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
L+ AYGK G ++ ++ M+ P+ ++H ++ + G +A ++ + S
Sbjct: 828 LLDAYGKSGKIDELFEIYKEMSAHECEPNTITHNIVISGLVKAGNVDDALDLYYDLMSDR 887
Query: 162 P-RPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGY 220
P+A TY ++ ++ + EA+++F + D +P+ +++++I + KAG
Sbjct: 888 DFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMSD---YGCRPNCAIYNILINGFGKAGEA 944
Query: 221 EKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSK---IYDQMQRAGLQPDVVSYALL 277
+ A LF M + GV+ TY+ L+ V + + +++ +GL PDVV Y L+
Sbjct: 945 DAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFRELKESGLNPDVVCYNLI 1004
Query: 278 INAYGKARREEEALAVFEEMLDA-GVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDR 336
IN GK R EEAL +F EM + G+ P YN L+ I+GMV++A ++ ++R
Sbjct: 1005 INGLGKFHRLEEALVLFNEMKKSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAG 1064
Query: 337 CSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITY 379
P++ ++ ++ Y + E A ++ + GF PN TY
Sbjct: 1065 LEPNVFTFNALIRGYSLSGKPEHAYAVYQTMVTGGFSPNTGTY 1107
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 95/427 (22%), Positives = 176/427 (41%), Gaps = 44/427 (10%)
Query: 70 LKQLKKWNVVSEVLEWLR--IQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGY 127
L L K + E +E +Q N + F L K + A K+L M G
Sbjct: 582 LAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGC 641
Query: 128 APSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEE 187
P V ++ ++ + G+ K A F +M+ P +T +L V+A ++A +
Sbjct: 642 VPDVFTYNTIIFGLVKNGQVKEAMCFFHQMKKL-VYPDFVTLCTLLPGVVKAGLIEDAYK 700
Query: 188 VFMTLL-------------DEEKSPLKP----------------------DQKMFHMMIY 212
+ L D S L D + ++ Y
Sbjct: 701 IIANFLYSCADQPANLFWEDLMGSILAEAGIDNAVSFSERLVANGICRDGDSILVPIIRY 760
Query: 213 MYKKAGGYEKARKLF-ALMAERGVQQSTVTYNSLMS--FETNYKEVSK-IYDQMQRAGLQ 268
+K AR LF + GVQ TYN L+ E + E+++ ++ Q++ G
Sbjct: 761 SFKHNNA-SGARMLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKNTGCI 819
Query: 269 PDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTV 328
PDV +Y L++AYGK+ + +E +++EM P +NI++ +G VD A +
Sbjct: 820 PDVATYNFLLDAYGKSGKIDELFEIYKEMSAHECEPNTITHNIVISGLVKAGNVDDALDL 879
Query: 329 FKCMRRDR-CSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYA 387
+ + DR SP C+Y ++ + + A++ F + G PN Y LI G+
Sbjct: 880 YYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMSDYGCRPNCAIYNILINGFG 939
Query: 388 KVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQK 447
K + ++ +M G++P+ ++ ++D D + +++E++ G PD
Sbjct: 940 KAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFRELKESGLNPDVV 999
Query: 448 AKNILLS 454
N++++
Sbjct: 1000 CYNLIIN 1006
Score = 105 bits (261), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 94/394 (23%), Positives = 159/394 (40%), Gaps = 46/394 (11%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
L+ GK G +A ++ M +KG P+ ++ L + + A + +M G
Sbjct: 581 LLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMG 640
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
P TY I+ V+ + KEA M + K + PD ++ KAG E
Sbjct: 641 CVPDVFTYNTIIFGLVKNGQVKEA----MCFFHQMKKLVYPDFVTLCTLLPGVVKAGLIE 696
Query: 222 KARKLFA-LMAERGVQQSTVTYNSLMS---FETNYKEVSKIYDQMQRAGLQPDVVSYALL 277
A K+ A + Q + + + LM E +++ G+ D S +
Sbjct: 697 DAYKIIANFLYSCADQPANLFWEDLMGSILAEAGIDNAVSFSERLVANGICRDGDSILVP 756
Query: 278 INAYG-KARREEEALAVFEEML-DAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRD 335
I Y K A +FE+ D GV+P YN+L+ + M++ A+ VF ++
Sbjct: 757 IIRYSFKHNNASGARMLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKNT 816
Query: 336 RCSPDICSYTTMLSAY-----------------------------------VNASDMEGA 360
C PD+ +Y +L AY V A +++ A
Sbjct: 817 GCIPDVATYNFLLDAYGKSGKIDELFEIYKEMSAHECEPNTITHNIVISGLVKAGNVDDA 876
Query: 361 EKFFRRLKQD-GFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMD 419
+ L D F P TYG LI G +K L + ++++ M G +PN I+ +++
Sbjct: 877 LDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMSDYGCRPNCAIYNILIN 936
Query: 420 AYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILL 453
+GK + D+A +K M G PD K ++L+
Sbjct: 937 GFGKAGEADAACALFKRMVKEGVRPDLKTYSVLV 970
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/255 (23%), Positives = 126/255 (49%), Gaps = 8/255 (3%)
Query: 95 NEMDFLMLITAYGKQGDFNKA-EKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAI 153
N + ++I+ K G+ + A + M+ + ++P+ ++ L++ + GR A+ +
Sbjct: 856 NTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQL 915
Query: 154 FRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYM 213
F M G RP+ Y I++ F +A + A +F ++ E ++PD K + +++
Sbjct: 916 FEGMSDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEG---VRPDLKTYSVLVDC 972
Query: 214 YKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNY---KEVSKIYDQMQRA-GLQP 269
G ++ F + E G+ V YN +++ + +E ++++M+++ G+ P
Sbjct: 973 LCMVGRVDEGLHYFRELKESGLNPDVVCYNLIINGLGKFHRLEEALVLFNEMKKSRGITP 1032
Query: 270 DVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVF 329
D+ +Y LI G A EEA ++ E+ AG+ P +N L+ +++SG + A V+
Sbjct: 1033 DLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPEHAYAVY 1092
Query: 330 KCMRRDRCSPDICSY 344
+ M SP+ +Y
Sbjct: 1093 QTMVTGGFSPNTGTY 1107
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 89/185 (48%)
Query: 305 THKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFF 364
T + N +L+A + G +++ VF M++ D +Y T+ + A
Sbjct: 119 TTETCNYMLEALRVDGKIEEMAYVFDLMQKRIIKRDTNTYLTIFKCLSVKGGLRQAPFAL 178
Query: 365 RRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKN 424
R++++ GFV N +Y LI K + ME+Y +M ++G +P+ ++++M GK
Sbjct: 179 RKMREFGFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRMILDGFRPSLQTYSSLMVGLGKR 238
Query: 425 KDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGINGL 484
+D +S + KEME+ G P+ I + + A + NEA E+L + P +
Sbjct: 239 RDIESVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTY 298
Query: 485 SISVD 489
++ +D
Sbjct: 299 TVLID 303
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/248 (22%), Positives = 105/248 (42%), Gaps = 35/248 (14%)
Query: 253 KEVSKIYDQMQRAGLQPDVVSY--------------------------ALLINAYG---- 282
+E++ ++D MQ+ ++ D +Y ++NAY
Sbjct: 137 EEMAYVFDLMQKRIIKRDTNTYLTIFKCLSVKGGLRQAPFALRKMREFGFVLNAYSYNGL 196
Query: 283 -----KARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRC 337
K+R EA+ V+ M+ G RP+ + Y+ L+ ++ + K M
Sbjct: 197 IHLLLKSRFCTEAMEVYRRMILDGFRPSLQTYSSLMVGLGKRRDIESVMGLLKEMETLGL 256
Query: 338 SPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMME 397
P++ ++T + A + A + +R+ +G P+V+TY LI L+ E
Sbjct: 257 KPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKE 316
Query: 398 IYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAK 457
++ KM+ KP++ + T++D + N+D DS ++ EME G PD IL+
Sbjct: 317 VFAKMKTGRHKPDRVTYITLLDRFSDNRDLDSVNQFWSEMEKDGHVPDVVTFTILVDALC 376
Query: 458 TADERNEA 465
A EA
Sbjct: 377 KAGNFGEA 384
Score = 68.6 bits (166), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 47/192 (24%), Positives = 84/192 (43%)
Query: 288 EEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTM 347
EE VF+ M ++ Y + ++ G + QA + MR + SY +
Sbjct: 137 EEMAYVFDLMQKRIIKRDTNTYLTIFKCLSVKGGLRQAPFALRKMREFGFVLNAYSYNGL 196
Query: 348 LSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGI 407
+ + + A + +RR+ DGF P++ TY +L+ G K ++E +M + +M G+
Sbjct: 197 IHLLLKSRFCTEAMEVYRRMILDGFRPSLQTYSSLMVGLGKRRDIESVMGLLKEMETLGL 256
Query: 408 KPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANE 467
KPN FT + G+ + A K M+ G PD +L+ TA + + A E
Sbjct: 257 KPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKE 316
Query: 468 LLGNFNHPNNEP 479
+ ++P
Sbjct: 317 VFAKMKTGRHKP 328
>gi|449439615|ref|XP_004137581.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g74580-like [Cucumis sativus]
Length = 857
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 96/381 (25%), Positives = 172/381 (45%), Gaps = 6/381 (1%)
Query: 92 WDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAE 151
+FN + + +I+ + K+ +A + M K+G P +++ L+ + G + +E
Sbjct: 177 CEFNAVSYCAVISGFYKENCQIEAYHLFDEMLKQGICPDILTFNKLIHVLCKKGNVQESE 236
Query: 152 AIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMI 211
+F ++ G P+ T+ I ++ EA + +++ E L PD ++ +I
Sbjct: 237 KLFSKVMKRGVCPNLFTFNIFIQGLCRKGAIDEAARLLESIVSE---GLTPDVISYNTLI 293
Query: 212 YMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETN---YKEVSKIYDQMQRAGLQ 268
+ K +A M GV+ + TYN++++ + KI G
Sbjct: 294 CGFCKHSKLVEAECYLHKMVNSGVEPNEFTYNTIINGFCKAGMMQNADKILRDAMFKGFI 353
Query: 269 PDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTV 328
PD +Y+ LIN A+AVF E ++ G + + YN L+ + G+V QA +
Sbjct: 354 PDEFTYSSLINGLCNDGDMNRAMAVFYEAMEKGFKHSIILYNTLVKGLSKQGLVLQALQL 413
Query: 329 FKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAK 388
K M CSPDI +Y +++ + A G +P++ T+ TLI GY K
Sbjct: 414 MKDMMEHGCSPDIWTYNLVVNGLCKMGCLSDANGILNDAIAKGCIPDIFTFNTLIDGYCK 473
Query: 389 VNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKA 448
N++K +EI D M +GI P+ + T+++ K + D+ V +K M G P+
Sbjct: 474 QRNMDKAIEILDTMLSHGITPDVITYNTLLNGLCKARKLDNVVDTFKAMLEKGCTPNIIT 533
Query: 449 KNILLSLAKTADERNEANELL 469
NIL+ + +EA EL
Sbjct: 534 YNILIESFCKDRKVSEAMELF 554
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 92/402 (22%), Positives = 190/402 (47%), Gaps = 13/402 (3%)
Query: 72 QLKKWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSV 131
Q++ +++ E+L+ FN+ LI K+G+ ++EK+ S + K+G P++
Sbjct: 197 QIEAYHLFDEMLKQGICPDILTFNK-----LIHVLCKKGNVQESEKLFSKVMKRGVCPNL 251
Query: 132 VSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMT 191
+ ++ R G A + + S G P ++Y ++ F + +K EAE
Sbjct: 252 FTFNIFIQGLCRKGAIDEAARLLESIVSEGLTPDVISYNTLICGFCKHSKLVEAECYLHK 311
Query: 192 LLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETN 251
+++ S ++P++ ++ +I + KAG + A K+ +G TY+SL++ N
Sbjct: 312 MVN---SGVEPNEFTYNTIINGFCKAGMMQNADKILRDAMFKGFIPDEFTYSSLINGLCN 368
Query: 252 ----YKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHK 307
+ ++ Y+ M++ G + ++ Y L+ K +AL + ++M++ G P
Sbjct: 369 DGDMNRAMAVFYEAMEK-GFKHSIILYNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIW 427
Query: 308 AYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRL 367
YN++++ G + A + C PDI ++ T++ Y +M+ A + +
Sbjct: 428 TYNLVVNGLCKMGCLSDANGILNDAIAKGCIPDIFTFNTLIDGYCKQRNMDKAIEILDTM 487
Query: 368 KQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDF 427
G P+VITY TL+ G K L+ +++ + M G PN + +++++ K++
Sbjct: 488 LSHGITPDVITYNTLLNGLCKARKLDNVVDTFKAMLEKGCTPNIITYNILIESFCKDRKV 547
Query: 428 DSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELL 469
A+ +KEM++ G PD L+ + E ++A EL
Sbjct: 548 SEAMELFKEMKTRGLTPDIVTLCTLICGLCSNGELDKAYELF 589
Score = 138 bits (347), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 81/347 (23%), Positives = 159/347 (45%), Gaps = 6/347 (1%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N F + I ++G ++A ++L + +G P V+S+ L+ + + + AE
Sbjct: 250 NLFTFNIFIQGLCRKGAIDEAARLLESIVSEGLTPDVISYNTLICGFCKHSKLVEAECYL 309
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
+M +SG P+ TY I+ F +A + A+++ L D PD+ + +I
Sbjct: 310 HKMVNSGVEPNEFTYNTIINGFCKAGMMQNADKI---LRDAMFKGFIPDEFTYSSLINGL 366
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSL---MSFETNYKEVSKIYDQMQRAGLQPDV 271
G +A +F E+G + S + YN+L +S + + ++ M G PD+
Sbjct: 367 CNDGDMNRAMAVFYEAMEKGFKHSIILYNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDI 426
Query: 272 VSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKC 331
+Y L++N K +A + + + G P +N L+D + +D+A +
Sbjct: 427 WTYNLVVNGLCKMGCLSDANGILNDAIAKGCIPDIFTFNTLIDGYCKQRNMDKAIEILDT 486
Query: 332 MRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNN 391
M +PD+ +Y T+L+ A ++ F+ + + G PN+ITY LI+ + K
Sbjct: 487 MLSHGITPDVITYNTLLNGLCKARKLDNVVDTFKAMLEKGCTPNIITYNILIESFCKDRK 546
Query: 392 LEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEME 438
+ + ME++ +M+ G+ P+ T++ N + D A + +E
Sbjct: 547 VSEAMELFKEMKTRGLTPDIVTLCTLICGLCSNGELDKAYELFVTIE 593
Score = 131 bits (330), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 110/450 (24%), Positives = 188/450 (41%), Gaps = 70/450 (15%)
Query: 75 KWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSH 134
K+ + +VL +R E ++ ++ YG++G +A V M+ PSV S+
Sbjct: 55 KFEAMEDVLAEMRKNVDSKMLEGVYIGIMRDYGRKGKVQEAVNVFERMDFYDCEPSVQSY 114
Query: 135 TALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANK------------- 181
A+M G + A ++ RM+ G P T+ I +K F +
Sbjct: 115 NAIMNILVEYGYFSQAHKVYMRMKDIGIYPDVYTHTIRMKSFCITGRPTAALRLLNNMPG 174
Query: 182 -----------------FKEAEEV-FMTLLDEE-KSPLKPDQKMFHMMIYMYKKAGGYEK 222
+KE ++ L DE K + PD F+ +I++ K G ++
Sbjct: 175 QGCEFNAVSYCAVISGFYKENCQIEAYHLFDEMLKQGICPDILTFNKLIHVLCKKGNVQE 234
Query: 223 ARKLFALMAERGVQQSTVTYNSL---MSFETNYKEVSKIYDQMQRAGLQPDVVSYALLIN 279
+ KLF+ + +RGV + T+N + + E +++ + + GL PDV+SY LI
Sbjct: 235 SEKLFSKVMKRGVCPNLFTFNIFIQGLCRKGAIDEAARLLESIVSEGLTPDVISYNTLIC 294
Query: 280 AYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSP 339
+ K + EA +M+++GV P YN +++ F +GM+ A + + P
Sbjct: 295 GFCKHSKLVEAECYLHKMVNSGVEPNEFTYNTIINGFCKAGMMQNADKILRDAMFKGFIP 354
Query: 340 DICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAK----------- 388
D +Y+++++ N DM A F + GF ++I Y TL+KG +K
Sbjct: 355 DEFTYSSLINGLCNDGDMNRAMAVFYEAMEKGFKHSIILYNTLVKGLSKQGLVLQALQLM 414
Query: 389 ------------------VNNLEKMMEIYDKMRV------NGIKPNQTIFTTIMDAYGKN 424
VN L KM + D + G P+ F T++D Y K
Sbjct: 415 KDMMEHGCSPDIWTYNLVVNGLCKMGCLSDANGILNDAIAKGCIPDIFTFNTLIDGYCKQ 474
Query: 425 KDFDSAVVWYKEMESCGFPPDQKAKNILLS 454
++ D A+ M S G PD N LL+
Sbjct: 475 RNMDKAIEILDTMLSHGITPDVITYNTLLN 504
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 86/382 (22%), Positives = 170/382 (44%), Gaps = 7/382 (1%)
Query: 88 IQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRY 147
+ S + NE + +I + K G A+K+L KG+ P ++++L+ G
Sbjct: 313 VNSGVEPNEFTYNTIINGFCKAGMMQNADKILRDAMFKGFIPDEFTYSSLINGLCNDGDM 372
Query: 148 KNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMF 207
A A+F G + S + Y ++K + +A ++ +++ SP D +
Sbjct: 373 NRAMAVFYEAMEKGFKHSIILYNTLVKGLSKQGLVLQALQLMKDMMEHGCSP---DIWTY 429
Query: 208 HMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLM---SFETNYKEVSKIYDQMQR 264
++++ K G A + +G T+N+L+ + N + +I D M
Sbjct: 430 NLVVNGLCKMGCLSDANGILNDAIAKGCIPDIFTFNTLIDGYCKQRNMDKAIEILDTMLS 489
Query: 265 AGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQ 324
G+ PDV++Y L+N KAR+ + + F+ ML+ G P YNIL+++F V +
Sbjct: 490 HGITPDVITYNTLLNGLCKARKLDNVVDTFKAMLEKGCTPNIITYNILIESFCKDRKVSE 549
Query: 325 ARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRL-KQDGFVPNVITYGTLI 383
A +FK M+ +PDI + T++ + +++ A + F + K+ F + + +I
Sbjct: 550 AMELFKEMKTRGLTPDIVTLCTLICGLCSNGELDKAYELFVTIEKEYKFSYSTAIFNIMI 609
Query: 384 KGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFP 443
+ + N+ +++ KM + P+ + ++D+Y K + D A + E S G
Sbjct: 610 NAFCEKLNVSMAEKLFHKMGGSDCAPDNYTYRVMIDSYCKTGNIDLAHTFLLENISKGLV 669
Query: 444 PDQKAKNILLSLAKTADERNEA 465
P +L+ +EA
Sbjct: 670 PSFTTCGKVLNCLCVTHRLSEA 691
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 83/357 (23%), Positives = 147/357 (41%), Gaps = 42/357 (11%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
+E + LI GD N+A V +KG+ S++ + L++ + G A +
Sbjct: 355 DEFTYSSLINGLCNDGDMNRAMAVFYEAMEKGFKHSIILYNTLVKGLSKQGLVLQALQLM 414
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
+ M G P TY +++ + +A + L D PD F+ +I Y
Sbjct: 415 KDMMEHGCSPDIWTYNLVVNGLCKMGCLSDANGI---LNDAIAKGCIPDIFTFNTLIDGY 471
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSKIYDQ---MQRAGLQPDV 271
K +KA ++ M G+ +TYN+L++ +++ + D M G P++
Sbjct: 472 CKQRNMDKAIEILDTMLSHGITPDVITYNTLLNGLCKARKLDNVVDTFKAMLEKGCTPNI 531
Query: 272 VSYALLINAYGKARREEEALAVFEEMLDAGVRP-----------------THKAY----- 309
++Y +LI ++ K R+ EA+ +F+EM G+ P KAY
Sbjct: 532 ITYNILIESFCKDRKVSEAMELFKEMKTRGLTPDIVTLCTLICGLCSNGELDKAYELFVT 591
Query: 310 --------------NILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNAS 355
NI+++AF V A +F M C+PD +Y M+ +Y
Sbjct: 592 IEKEYKFSYSTAIFNIMINAFCEKLNVSMAEKLFHKMGGSDCAPDNYTYRVMIDSYCKTG 651
Query: 356 DMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQT 412
+++ A F G VP+ T G ++ + L + + I + M NGI P +
Sbjct: 652 NIDLAHTFLLENISKGLVPSFTTCGKVLNCLCVTHRLSEAVVIINLMVQNGIVPEEV 708
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 83/350 (23%), Positives = 149/350 (42%), Gaps = 44/350 (12%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVS-HTALMEAYGRGGRYKNAEAIFRRMQSS 160
+I G G F E VL+ M K + + + +M YGR G+ + A +F RM
Sbjct: 46 MIEKLGLHGKFEAMEDVLAEMRKNVDSKMLEGVYIGIMRDYGRKGKVQEAVNVFERMDFY 105
Query: 161 GPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGY 220
PS +Y I+ + VE G +
Sbjct: 106 DCEPSVQSYNAIMNILVEY--------------------------------------GYF 127
Query: 221 EKARKLFALMAERGVQQSTVTYNSLM-SFETNYKEVS--KIYDQMQRAGLQPDVVSYALL 277
+A K++ M + G+ T+ M SF + + ++ + M G + + VSY +
Sbjct: 128 SQAHKVYMRMKDIGIYPDVYTHTIRMKSFCITGRPTAALRLLNNMPGQGCEFNAVSYCAV 187
Query: 278 INAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVF-KCMRRDR 336
I+ + K + EA +F+EML G+ P +N L+ G V ++ +F K M+R
Sbjct: 188 ISGFYKENCQIEAYHLFDEMLKQGICPDILTFNKLIHVLCKKGNVQESEKLFSKVMKRGV 247
Query: 337 CSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMM 396
C P++ ++ + ++ A + + +G P+VI+Y TLI G+ K + L +
Sbjct: 248 C-PNLFTFNIFIQGLCRKGAIDEAARLLESIVSEGLTPDVISYNTLICGFCKHSKLVEAE 306
Query: 397 EIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQ 446
KM +G++PN+ + TI++ + K +A ++ GF PD+
Sbjct: 307 CYLHKMVNSGVEPNEFTYNTIINGFCKAGMMQNADKILRDAMFKGFIPDE 356
>gi|242078641|ref|XP_002444089.1| hypothetical protein SORBIDRAFT_07g007540 [Sorghum bicolor]
gi|241940439|gb|EES13584.1| hypothetical protein SORBIDRAFT_07g007540 [Sorghum bicolor]
Length = 942
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 99/404 (24%), Positives = 192/404 (47%), Gaps = 41/404 (10%)
Query: 77 NVVSEVLEWLRIQSWWD--FNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSH 134
+++ E L LR + W D F + + MLI + + G +N A ++ + M K P+
Sbjct: 533 SLLEEALYILREKKWKDSAFEDNLYHMLICSCKEGGSYNDAVRIYNQMPKSETHPNPRIS 592
Query: 135 TALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLD 194
+++ + R+ +AEAI+ +++S + Y +I++++++A + ++A + +
Sbjct: 593 CTMIDVFSMMKRFADAEAIYLELKASASVLDMIAYSVIVRMYIKAQRLEDACSILAEM-- 650
Query: 195 EEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSF---ETN 251
E++ + PD+ +F M+ Y+K G EK + + + V+ YN +++
Sbjct: 651 EKQKEIIPDKYLFLDMLRTYQKCGLLEKLADTYYWIRKSQVECDEAMYNCIINCCGRAIP 710
Query: 252 YKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVF----------------- 294
E+S+I+D+M + G + V+ +L++ YGKA A VF
Sbjct: 711 VDELSRIFDEMIQQGHLANTVTLNVLLDIYGKAGLFNRAEKVFIMARKQGLADIISYNTI 770
Query: 295 -----------------EEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRC 337
+ M DAG + +AYN +LDA+ +G +++ +V + M+R +C
Sbjct: 771 IAAYAKSGNFHSMNYFVQMMQDAGFPVSPEAYNCMLDAYGKAGQLEEFASVLQKMKRAKC 830
Query: 338 SPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMME 397
D +Y M++ Y +E LK G VP++ +Y TLIK Y E ++
Sbjct: 831 KFDHYTYNIMINIYGRRGWIEDVSNVLAELKDRGVVPDLYSYNTLIKAYGIARMPEDAVK 890
Query: 398 IYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCG 441
+ +MR+ GI P++ + ++ A +N++F AV W M G
Sbjct: 891 LMQEMRIKGISPDRVTYANLIAALQRNENFLEAVKWSLWMRQTG 934
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 57/274 (20%), Positives = 135/274 (49%), Gaps = 5/274 (1%)
Query: 200 LKPDQKMFHMMIYMYKKAGGYEKARKLFA-LMAERGVQQSTVTYNSLMSFETNYK---EV 255
LK + +H+ + ++ A L ++A+ G +N L+ +
Sbjct: 201 LKGNPHAYHLALQAIAWKEDWKMAELLLCEMVADSGCTLDARAFNGLIYVCAKRRLDAWA 260
Query: 256 SKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDA 315
+K + M +QP++ ++ +L+ Y K + EA F++M + ++ + AY+ ++
Sbjct: 261 TKWFHMMLEREVQPNLSTFGMLMVLYQKTGKLSEAEFTFQKMRNCNIKCVN-AYSAMITL 319
Query: 316 FAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPN 375
+ G+ ++ M D P++ ++ L+ Y ME AE + + +GF N
Sbjct: 320 YTRLGLFAKSEDTINLMNNDGLVPNMENWLVRLNVYCQQGKMEEAELVLQSMVDEGFTLN 379
Query: 376 VITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYK 435
++ Y TLI GY K ++++K ++D + G+ P++T + ++++ +G+ ++ A+++Y+
Sbjct: 380 IVAYNTLITGYGKSSDVQKANRVFDSLGSAGLAPDETTYRSMVEGFGRANIYEEAILYYR 439
Query: 436 EMESCGFPPDQKAKNILLSLAKTADERNEANELL 469
+++ GF P+ +++L D+ A E++
Sbjct: 440 KLKGAGFRPNASNFYTMINLLARRDDNETAAEIM 473
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 85/381 (22%), Positives = 169/381 (44%), Gaps = 12/381 (3%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N F ML+ Y K G ++AE M + V +++A++ Y R G + +E
Sbjct: 275 NLSTFGMLMVLYQKTGKLSEAEFTFQKM-RNCNIKCVNAYSAMITLYTRLGLFAKSEDTI 333
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
M + G P+ + + L ++ + K +EAE V +++DE + ++ +I Y
Sbjct: 334 NLMNNDGLVPNMENWLVRLNVYCQQGKMEEAELVLQSMVDE---GFTLNIVAYNTLITGY 390
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSLM---SFETNYKEVSKIYDQMQRAGLQPDV 271
K+ +KA ++F + G+ TY S++ Y+E Y +++ AG +P+
Sbjct: 391 GKSSDVQKANRVFDSLGSAGLAPDETTYRSMVEGFGRANIYEEAILYYRKLKGAGFRPNA 450
Query: 272 VSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKC 331
++ +IN + E A + E+M AG + + +L+ A+ G + + + +
Sbjct: 451 SNFYTMINLLARRDDNETAAEIMEDMRAAGCQCS-SIVTVLVRAYGAVGRMHKVLPILQA 509
Query: 332 MRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFR--RLKQDGFVPNVITYGTLIKGYAKV 389
+ D S + +++++V S +E A R + K F N+ Y LI +
Sbjct: 510 CFNKKILFDATSCSILVTSFVQKSLLEEALYILREKKWKDSAFEDNL--YHMLICSCKEG 567
Query: 390 NNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAK 449
+ + IY++M + PN I T++D + K F A Y E+++ D A
Sbjct: 568 GSYNDAVRIYNQMPKSETHPNPRISCTMIDVFSMMKRFADAEAIYLELKASASVLDMIAY 627
Query: 450 NILLSLAKTADERNEANELLG 470
++++ + A +A +L
Sbjct: 628 SVIVRMYIKAQRLEDACSILA 648
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 86/452 (19%), Positives = 181/452 (40%), Gaps = 79/452 (17%)
Query: 92 WDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAE 151
+ N + + LIT YGK D KA +V + G AP ++ +++E +GR Y+ A
Sbjct: 376 FTLNIVAYNTLITGYGKSSDVQKANRVFDSLGSAGLAPDETTYRSMVEGFGRANIYEEAI 435
Query: 152 AIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMI 211
+R+++ +G RP+A + ++ L + + A E+ +++ ++ + +++
Sbjct: 436 LYYRKLKGAGFRPNASNFYTMINLLARRDDNETAAEI----MEDMRAAGCQCSSIVTVLV 491
Query: 212 YMYKKAGGYEKA---------RKLFALMAERGVQQSTVTYNSLM---------------S 247
Y G K +K+ + ++ SL+ +
Sbjct: 492 RAYGAVGRMHKVLPILQACFNKKILFDATSCSILVTSFVQKSLLEEALYILREKKWKDSA 551
Query: 248 FETN--------------YKEVSKIYDQMQRAGLQP------------------------ 269
FE N Y + +IY+QM ++ P
Sbjct: 552 FEDNLYHMLICSCKEGGSYNDAVRIYNQMPKSETHPNPRISCTMIDVFSMMKRFADAEAI 611
Query: 270 -----------DVVSYALLINAYGKARREEEALAVFEEM-LDAGVRPTHKAYNILLDAFA 317
D+++Y++++ Y KA+R E+A ++ EM + P + +L +
Sbjct: 612 YLELKASASVLDMIAYSVIVRMYIKAQRLEDACSILAEMEKQKEIIPDKYLFLDMLRTYQ 671
Query: 318 ISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVI 377
G++++ + +R+ + D Y +++ A ++ + F + Q G + N +
Sbjct: 672 KCGLLEKLADTYYWIRKSQVECDEAMYNCIINCCGRAIPVDELSRIFDEMIQQGHLANTV 731
Query: 378 TYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEM 437
T L+ Y K + +++ R G+ + + TI+ AY K+ +F S + + M
Sbjct: 732 TLNVLLDIYGKAGLFNRAEKVFIMARKQGL-ADIISYNTIIAAYAKSGNFHSMNYFVQMM 790
Query: 438 ESCGFPPDQKAKNILLSLAKTADERNEANELL 469
+ GFP +A N +L A + E +L
Sbjct: 791 QDAGFPVSPEAYNCMLDAYGKAGQLEEFASVL 822
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 67/241 (27%), Positives = 120/241 (49%), Gaps = 8/241 (3%)
Query: 185 AEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNS 244
A + F +L+ E ++P+ F M++ +Y+K G +A F M ++ Y++
Sbjct: 260 ATKWFHMMLERE---VQPNLSTFGMLMVLYQKTGKLSEAEFTFQKMRNCNIK-CVNAYSA 315
Query: 245 LMSFETNYKEVSKIYDQ---MQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAG 301
+++ T +K D M GL P++ ++ + +N Y + + EEA V + M+D G
Sbjct: 316 MITLYTRLGLFAKSEDTINLMNNDGLVPNMENWLVRLNVYCQQGKMEEAELVLQSMVDEG 375
Query: 302 VRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAE 361
AYN L+ + S V +A VF + +PD +Y +M+ + A+ E A
Sbjct: 376 FTLNIVAYNTLITGYGKSSDVQKANRVFDSLGSAGLAPDETTYRSMVEGFGRANIYEEAI 435
Query: 362 KFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAY 421
++R+LK GF PN + T+I A+ ++ E EI + MR G + + +I T ++ AY
Sbjct: 436 LYYRKLKGAGFRPNASNFYTMINLLARRDDNETAAEIMEDMRAAGCQCS-SIVTVLVRAY 494
Query: 422 G 422
G
Sbjct: 495 G 495
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 81/413 (19%), Positives = 172/413 (41%), Gaps = 41/413 (9%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N ++L+ + Y +QG +AE VL M +G+ ++V++ L+ YG+ + A +F
Sbjct: 344 NMENWLVRLNVYCQQGKMEEAELVLQSMVDEGFTLNIVAYNTLITGYGKSSDVQKANRVF 403
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
+ S+G P TY+ +++ F AN ++EA + L + + +P+ F+ MI +
Sbjct: 404 DSLGSAGLAPDETTYRSMVEGFGRANIYEEAILYYRKL---KGAGFRPNASNFYTMINLL 460
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFET--NYKEVSKIYDQMQRAGLQPDVV 272
+ E A ++ M G Q S++ + ++ +V I + D
Sbjct: 461 ARRDDNETAAEIMEDMRAAGCQCSSIVTVLVRAYGAVGRMHKVLPILQACFNKKILFDAT 520
Query: 273 SYALLINAYGKARREEEALAVFEE-----------------------------------M 297
S ++L+ ++ + EEAL + E M
Sbjct: 521 SCSILVTSFVQKSLLEEALYILREKKWKDSAFEDNLYHMLICSCKEGGSYNDAVRIYNQM 580
Query: 298 LDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDM 357
+ P + ++D F++ A ++ ++ D+ +Y+ ++ Y+ A +
Sbjct: 581 PKSETHPNPRISCTMIDVFSMMKRFADAEAIYLELKASASVLDMIAYSVIVRMYIKAQRL 640
Query: 358 EGAEKFFRRL-KQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTT 416
E A + KQ +P+ + +++ Y K LEK+ + Y +R + ++ ++ ++
Sbjct: 641 EDACSILAEMEKQKEIIPDKYLFLDMLRTYQKCGLLEKLADTYYWIRKSQVECDEAMYNC 700
Query: 417 IMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELL 469
I++ G+ D + EM G + N+LL + A N A ++
Sbjct: 701 IINCCGRAIPVDELSRIFDEMIQQGHLANTVTLNVLLDIYGKAGLFNRAEKVF 753
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 63/277 (22%), Positives = 135/277 (48%), Gaps = 6/277 (2%)
Query: 168 TYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLF 227
Y + L+ +K AE + ++ + L D + F+ +IY+ K A K F
Sbjct: 207 AYHLALQAIAWKEDWKMAELLLCEMVADSGCTL--DARAFNGLIYVCAKRRLDAWATKWF 264
Query: 228 ALMAERGVQQSTVTYNSLMSFETNYKEVSK---IYDQMQRAGLQPDVVSYALLINAYGKA 284
+M ER VQ + T+ LM ++S+ + +M+ ++ V +Y+ +I Y +
Sbjct: 265 HMMLEREVQPNLSTFGMLMVLYQKTGKLSEAEFTFQKMRNCNIKC-VNAYSAMITLYTRL 323
Query: 285 RREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSY 344
++ M + G+ P + + + L+ + G +++A V + M + + +I +Y
Sbjct: 324 GLFAKSEDTINLMNNDGLVPNMENWLVRLNVYCQQGKMEEAELVLQSMVDEGFTLNIVAY 383
Query: 345 TTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRV 404
T+++ Y +SD++ A + F L G P+ TY ++++G+ + N E+ + Y K++
Sbjct: 384 NTLITGYGKSSDVQKANRVFDSLGSAGLAPDETTYRSMVEGFGRANIYEEAILYYRKLKG 443
Query: 405 NGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCG 441
G +PN + F T+++ + D ++A ++M + G
Sbjct: 444 AGFRPNASNFYTMINLLARRDDNETAAEIMEDMRAAG 480
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 69/278 (24%), Positives = 121/278 (43%), Gaps = 7/278 (2%)
Query: 99 FLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQ 158
FL ++ Y K G K ++ K + ++ GR IF M
Sbjct: 663 FLDMLRTYQKCGLLEKLADTYYWIRKSQVECDEAMYNCIINCCGRAIPVDELSRIFDEMI 722
Query: 159 SSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAG 218
G + +T ++L ++ +A F AE+VF+ K L D ++ +I Y K+G
Sbjct: 723 QQGHLANTVTLNVLLDIYGKAGLFNRAEKVFIM---ARKQGL-ADIISYNTIIAAYAKSG 778
Query: 219 GYEKARKLFALMAERGVQQSTVTYNSLMSF---ETNYKEVSKIYDQMQRAGLQPDVVSYA 275
+ +M + G S YN ++ +E + + +M+RA + D +Y
Sbjct: 779 NFHSMNYFVQMMQDAGFPVSPEAYNCMLDAYGKAGQLEEFASVLQKMKRAKCKFDHYTYN 838
Query: 276 LLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRD 335
++IN YG+ E+ V E+ D GV P +YN L+ A+ I+ M + A + + MR
Sbjct: 839 IMINIYGRRGWIEDVSNVLAELKDRGVVPDLYSYNTLIKAYGIARMPEDAVKLMQEMRIK 898
Query: 336 RCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFV 373
SPD +Y +++A + A K+ ++Q G V
Sbjct: 899 GISPDRVTYANLIAALQRNENFLEAVKWSLWMRQTGVV 936
Score = 40.8 bits (94), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 36/189 (19%), Positives = 77/189 (40%), Gaps = 1/189 (0%)
Query: 291 LAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSA 350
L + E + D+G +A+N L+ A + A F M P++ ++ ++
Sbjct: 226 LLLCEMVADSGCTLDARAFNGLIYVCAKRRLDAWATKWFHMMLEREVQPNLSTFGMLMVL 285
Query: 351 YVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPN 410
Y + AE F++++ + V Y +I Y ++ K + + M +G+ PN
Sbjct: 286 YQKTGKLSEAEFTFQKMRNCN-IKCVNAYSAMITLYTRLGLFAKSEDTINLMNNDGLVPN 344
Query: 411 QTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLG 470
+ ++ Y + + A + + M GF + A N L++ + + +AN +
Sbjct: 345 MENWLVRLNVYCQQGKMEEAELVLQSMVDEGFTLNIVAYNTLITGYGKSSDVQKANRVFD 404
Query: 471 NFNHPNNEP 479
+ P
Sbjct: 405 SLGSAGLAP 413
>gi|357151724|ref|XP_003575883.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
chloroplastic-like [Brachypodium distachyon]
Length = 757
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 111/466 (23%), Positives = 205/466 (43%), Gaps = 29/466 (6%)
Query: 1 MGMLAPRKFMQKRRKVEVFKDAAD-----------EAGKKNWRRLMNQIEEVGSAVAVLR 49
+G+ + F+ ++++F DA D +A + + L+ + E GS + +L
Sbjct: 123 VGLGLVQSFIGSYARLQLFDDAFDLVSNQLDMFGVQANTEVYNHLLTVLAE-GSKIKLLE 181
Query: 50 SERTR--GQPLPKDLV-----LGTLVRLKQLKKWNVVSEVLEWLRIQSWWDFNEMDFLML 102
S T Q + D+V + L R +Q + ++ E + + +E F L
Sbjct: 182 SAYTEMSSQGIEPDVVTFNTVIDALCRARQARTAVLMLEEMSSCDVAP----DETTFTTL 237
Query: 103 ITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGP 162
+ + ++G A ++ + M++ G +P+ V+ L+ Y + GR +A ++ + G
Sbjct: 238 MEGFVEEGSIEAALRLKARMSEMGCSPTSVTVNVLINGYCKLGRVGDALGYIQQEIADGF 297
Query: 163 RPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEK 222
P +T+ + + A +V +L E +PD + +I G E+
Sbjct: 298 EPDRVTFSTFVNGLCQNGHVDHALKVLGLMLQEG---CEPDVYTYSTVINCLCNNGELEE 354
Query: 223 ARKLFALMAERGVQQSTVTYNSL---MSFETNYKEVSKIYDQMQRAGLQPDVVSYALLIN 279
A+ + M + G T T+N+L + E +E + ++ GL P+V ++ +LIN
Sbjct: 355 AKGIVNQMVDSGCLPDTTTFNTLIVALCTENQLEEALDLARELTVKGLSPNVYTFNILIN 414
Query: 280 AYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSP 339
A K A+ +FEEM +G P YNIL+D SG + +A + K M C
Sbjct: 415 ALCKVGDPHLAVRLFEEMKSSGCTPDEVTYNILIDNLCSSGKLAKALDLLKEMEVSGCPQ 474
Query: 340 DICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIY 399
+Y T++ +E AE+ F ++ G N IT+ TLI G ++ E+
Sbjct: 475 STVTYNTIIDGLCKRRRIEEAEEVFDQMDVTGIGRNAITFNTLIDGLCNAERIDDAAELV 534
Query: 400 DKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPD 445
D+M G++PN + +I+ Y K + A + M + GF D
Sbjct: 535 DQMISEGLQPNNVTYNSILTHYCKQGNISKAADILQTMTANGFEVD 580
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 102/425 (24%), Positives = 189/425 (44%), Gaps = 12/425 (2%)
Query: 28 KKNWRRLMNQIEEVGSAVAVLR--SERTRGQPLPKDLVLGTLVRLKQLKKWNVVSEVLEW 85
+ + LM E GS A LR + + P + + L+ K V + L +
Sbjct: 231 ETTFTTLMEGFVEEGSIEAALRLKARMSEMGCSPTSVTVNVLI--NGYCKLGRVGDALGY 288
Query: 86 LR--IQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGR 143
++ I ++ + + F + + G + A KVL M ++G P V +++ ++
Sbjct: 289 IQQEIADGFEPDRVTFSTFVNGLCQNGHVDHALKVLGLMLQEGCEPDVYTYSTVINCLCN 348
Query: 144 GGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPD 203
G + A+ I +M SG P T+ ++ N+ +EA ++ L L P+
Sbjct: 349 NGELEEAKGIVNQMVDSGCLPDTTTFNTLIVALCTENQLEEALDLAREL---TVKGLSPN 405
Query: 204 QKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSKIYD--- 260
F+++I K G A +LF M G VTYN L+ + +++K D
Sbjct: 406 VYTFNILINALCKVGDPHLAVRLFEEMKSSGCTPDEVTYNILIDNLCSSGKLAKALDLLK 465
Query: 261 QMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISG 320
+M+ +G V+Y +I+ K RR EEA VF++M G+ +N L+D +
Sbjct: 466 EMEVSGCPQSTVTYNTIIDGLCKRRRIEEAEEVFDQMDVTGIGRNAITFNTLIDGLCNAE 525
Query: 321 MVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYG 380
+D A + M + P+ +Y ++L+ Y ++ A + + +GF +V+TY
Sbjct: 526 RIDDAAELVDQMISEGLQPNNVTYNSILTHYCKQGNISKAADILQTMTANGFEVDVVTYA 585
Query: 381 TLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESC 440
TLI G K + +++ MR+ G+KP + ++ + + + A+ ++EM
Sbjct: 586 TLINGLCKARRTQAALKLLRGMRMKGMKPTPKAYNPVIQSLFRGNNGRDALSLFREMTEV 645
Query: 441 GFPPD 445
G PPD
Sbjct: 646 GGPPD 650
Score = 131 bits (330), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 89/361 (24%), Positives = 162/361 (44%), Gaps = 6/361 (1%)
Query: 97 MDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRR 156
+ F +I A + A +L M+ AP + T LME + G + A + R
Sbjct: 197 VTFNTVIDALCRARQARTAVLMLEEMSSCDVAPDETTFTTLMEGFVEEGSIEAALRLKAR 256
Query: 157 MQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKK 216
M G P+++T +++ + + + +A + E +PD+ F + +
Sbjct: 257 MSEMGCSPTSVTVNVLINGYCKLGRVGDA---LGYIQQEIADGFEPDRVTFSTFVNGLCQ 313
Query: 217 AGGYEKARKLFALMAERGVQQSTVTYNSLMSFETN---YKEVSKIYDQMQRAGLQPDVVS 273
G + A K+ LM + G + TY+++++ N +E I +QM +G PD +
Sbjct: 314 NGHVDHALKVLGLMLQEGCEPDVYTYSTVINCLCNNGELEEAKGIVNQMVDSGCLPDTTT 373
Query: 274 YALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMR 333
+ LI A + EEAL + E+ G+ P +NIL++A G A +F+ M+
Sbjct: 374 FNTLIVALCTENQLEEALDLARELTVKGLSPNVYTFNILINALCKVGDPHLAVRLFEEMK 433
Query: 334 RDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLE 393
C+PD +Y ++ ++ + A + ++ G + +TY T+I G K +E
Sbjct: 434 SSGCTPDEVTYNILIDNLCSSGKLAKALDLLKEMEVSGCPQSTVTYNTIIDGLCKRRRIE 493
Query: 394 KMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILL 453
+ E++D+M V GI N F T++D + D A +M S G P+ N +L
Sbjct: 494 EAEEVFDQMDVTGIGRNAITFNTLIDGLCNAERIDDAAELVDQMISEGLQPNNVTYNSIL 553
Query: 454 S 454
+
Sbjct: 554 T 554
Score = 128 bits (321), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 81/333 (24%), Positives = 149/333 (44%), Gaps = 35/333 (10%)
Query: 137 LMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEE 196
L+ G + K E+ + M S G P +T+ ++ A ++A + L +
Sbjct: 167 LLTVLAEGSKIKLLESAYTEMSSQGIEPDVVTFNTVIDALCRA---RQARTAVLMLEEMS 223
Query: 197 KSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVS 256
+ PD+ F ++ + + G E A +L A M+E G ++VT N
Sbjct: 224 SCDVAPDETTFTTLMEGFVEEGSIEAALRLKARMSEMGCSPTSVTVN------------- 270
Query: 257 KIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAF 316
+LIN Y K R +AL ++ + G P ++ ++
Sbjct: 271 -------------------VLINGYCKLGRVGDALGYIQQEIADGFEPDRVTFSTFVNGL 311
Query: 317 AISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNV 376
+G VD A V M ++ C PD+ +Y+T+++ N ++E A+ ++ G +P+
Sbjct: 312 CQNGHVDHALKVLGLMLQEGCEPDVYTYSTVINCLCNNGELEEAKGIVNQMVDSGCLPDT 371
Query: 377 ITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKE 436
T+ TLI N LE+ +++ ++ V G+ PN F +++A K D AV ++E
Sbjct: 372 TTFNTLIVALCTENQLEEALDLARELTVKGLSPNVYTFNILINALCKVGDPHLAVRLFEE 431
Query: 437 MESCGFPPDQKAKNILLSLAKTADERNEANELL 469
M+S G PD+ NIL+ ++ + +A +LL
Sbjct: 432 MKSSGCTPDEVTYNILIDNLCSSGKLAKALDLL 464
Score = 111 bits (278), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 91/334 (27%), Positives = 150/334 (44%), Gaps = 11/334 (3%)
Query: 58 LPKDLVLGTLVRLKQLKKWNVVSEVLEWLRIQSWWDF--NEMDFLMLITAYGKQGDFNKA 115
LP TL+ L N + E L+ R + N F +LI A K GD + A
Sbjct: 368 LPDTTTFNTLI--VALCTENQLEEALDLARELTVKGLSPNVYTFNILINALCKVGDPHLA 425
Query: 116 EKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKL 175
++ M G P V++ L++ G+ A + + M+ SG S +TY I+
Sbjct: 426 VRLFEEMKSSGCTPDEVTYNILIDNLCSSGKLAKALDLLKEMEVSGCPQSTVTYNTIIDG 485
Query: 176 FVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGV 235
+ + +EAEEVF + + + + + F+ +I A + A +L M G+
Sbjct: 486 LCKRRRIEEAEEVFDQM---DVTGIGRNAITFNTLIDGLCNAERIDDAAELVDQMISEGL 542
Query: 236 QQSTVTYNSLMSFETNYKEVSKIYDQMQRA---GLQPDVVSYALLINAYGKARREEEALA 292
Q + VTYNS+++ +SK D +Q G + DVV+YA LIN KARR + AL
Sbjct: 543 QPNNVTYNSILTHYCKQGNISKAADILQTMTANGFEVDVVTYATLINGLCKARRTQAALK 602
Query: 293 VFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYV 352
+ M G++PT KAYN ++ + A ++F+ M PD +Y +
Sbjct: 603 LLRGMRMKGMKPTPKAYNPVIQSLFRGNNGRDALSLFREMTEVGGPPDAFTYKIVFRGLC 662
Query: 353 -NASDMEGAEKFFRRLKQDGFVPNVITYGTLIKG 385
++ A F + +GF+P ++ L +G
Sbjct: 663 RGGGPIKEAFDFLVEMADNGFIPEFSSFRMLAEG 696
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 60/259 (23%), Positives = 119/259 (45%), Gaps = 3/259 (1%)
Query: 234 GVQQSTVTYNSLMSF---ETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEA 290
GVQ +T YN L++ + K + Y +M G++PDVV++ +I+A +AR+ A
Sbjct: 156 GVQANTEVYNHLLTVLAEGSKIKLLESAYTEMSSQGIEPDVVTFNTVIDALCRARQARTA 215
Query: 291 LAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSA 350
+ + EEM V P + L++ F G ++ A + M CSP + +++
Sbjct: 216 VLMLEEMSSCDVAPDETTFTTLMEGFVEEGSIEAALRLKARMSEMGCSPTSVTVNVLING 275
Query: 351 YVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPN 410
Y + A + ++ DGF P+ +T+ T + G + +++ +++ M G +P+
Sbjct: 276 YCKLGRVGDALGYIQQEIADGFEPDRVTFSTFVNGLCQNGHVDHALKVLGLMLQEGCEPD 335
Query: 411 QTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLG 470
++T+++ N + + A +M G PD N L+ T ++ EA +L
Sbjct: 336 VYTYSTVINCLCNNGELEEAKGIVNQMVDSGCLPDTTTFNTLIVALCTENQLEEALDLAR 395
Query: 471 NFNHPNNEPGINGLSISVD 489
P + +I ++
Sbjct: 396 ELTVKGLSPNVYTFNILIN 414
>gi|302826103|ref|XP_002994591.1| hypothetical protein SELMODRAFT_138844 [Selaginella moellendorffii]
gi|300137362|gb|EFJ04342.1| hypothetical protein SELMODRAFT_138844 [Selaginella moellendorffii]
Length = 599
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 88/372 (23%), Positives = 182/372 (48%), Gaps = 6/372 (1%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
++ AY + G+ E +L+ M ++G+ ++ +T ++ + + + F R+++ G
Sbjct: 128 IVQAYCQAGNMETVEALLAQMEEEGFQGNLGLYTTVLNGFAEIRDEEKCLSFFHRLKACG 187
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
P+A TY I+KLF +A +A ++ L + +K + P++ ++ M++ Y + G +
Sbjct: 188 LSPTAATYGCIVKLFTKAGNMAKALDI---LEEMDKHGVSPNKMIYAMIMDGYARGGDFT 244
Query: 222 KARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSK---IYDQMQRAGLQPDVVSYALLI 278
A K++ M G++ V YN L+ + K + + ++ L P + +Y ++
Sbjct: 245 AAFKVWEDMVSAGLKPDIVIYNILVHAFCKAGRMDKALGVLENIEANRLLPTIETYTSIL 304
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCS 338
+ Y K ++AL VF+ + AG+RP +YN LL A + ++ AR + M +
Sbjct: 305 DGYVKGGNIQKALEVFDRIKTAGLRPGVVSYNSLLSGLAKARQMENARLMLNEMLANGVV 364
Query: 339 PDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEI 398
P+ SYT + Y A D+E A F+R+K++ +++ YG L+K K +++ E+
Sbjct: 365 PNERSYTALTEGYARAGDVEKAFGMFQRMKKENLAIDIVAYGALLKACCKSGAMQRAAEV 424
Query: 399 YDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKT 458
+ ++ G+K N+ + T++D + + + A +M+ GF D +
Sbjct: 425 FQQITDAGLKHNRITYCTMLDGWARKGELSKARDLLNDMQKHGFHLDTICYTSFIKACFR 484
Query: 459 ADERNEANELLG 470
+ + E E L
Sbjct: 485 SGDTEEVTETLA 496
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 88/374 (23%), Positives = 174/374 (46%), Gaps = 6/374 (1%)
Query: 99 FLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQ 158
+ LI AY + D A M +G + +++ Y G + AE F + +
Sbjct: 55 YTSLIHAYAEARDMEGAVACTEEMLSQGIQLNEAVFCSIISGYASAGNNEAAEHWFEKFK 114
Query: 159 SSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAG 218
+ P + Y I++ + +A + E + + E+ + + ++ ++ + +
Sbjct: 115 AENLVPGGIVYNSIVQAYCQAGNMETVEALLAQM---EEEGFQGNLGLYTTVLNGFAEIR 171
Query: 219 GYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSK---IYDQMQRAGLQPDVVSYA 275
EK F + G+ + TY ++ T ++K I ++M + G+ P+ + YA
Sbjct: 172 DEEKCLSFFHRLKACGLSPTAATYGCIVKLFTKAGNMAKALDILEEMDKHGVSPNKMIYA 231
Query: 276 LLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRD 335
++++ Y + A V+E+M+ AG++P YNIL+ AF +G +D+A V + + +
Sbjct: 232 MIMDGYARGGDFTAAFKVWEDMVSAGLKPDIVIYNILVHAFCKAGRMDKALGVLENIEAN 291
Query: 336 RCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKM 395
R P I +YT++L YV +++ A + F R+K G P V++Y +L+ G AK +E
Sbjct: 292 RLLPTIETYTSILDGYVKGGNIQKALEVFDRIKTAGLRPGVVSYNSLLSGLAKARQMENA 351
Query: 396 MEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSL 455
+ ++M NG+ PN+ +T + + Y + D + A ++ M+ D A LL
Sbjct: 352 RLMLNEMLANGVVPNERSYTALTEGYARAGDVEKAFGMFQRMKKENLAIDIVAYGALLKA 411
Query: 456 AKTADERNEANELL 469
+ A E+
Sbjct: 412 CCKSGAMQRAAEVF 425
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 91/379 (24%), Positives = 175/379 (46%), Gaps = 6/379 (1%)
Query: 94 FNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAI 153
NE F +I+ Y G+ AE + P + + ++++AY + G + EA+
Sbjct: 85 LNEAVFCSIISGYASAGNNEAAEHWFEKFKAENLVPGGIVYNSIVQAYCQAGNMETVEAL 144
Query: 154 FRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYM 213
+M+ G + + Y +L F E ++ F L + L P + ++ +
Sbjct: 145 LAQMEEEGFQGNLGLYTTVLNGFAEIRDEEKCLSFFHRL---KACGLSPTAATYGCIVKL 201
Query: 214 YKKAGGYEKARKLFALMAERGVQQSTVTYNSLM---SFETNYKEVSKIYDQMQRAGLQPD 270
+ KAG KA + M + GV + + Y +M + ++ K+++ M AGL+PD
Sbjct: 202 FTKAGNMAKALDILEEMDKHGVSPNKMIYAMIMDGYARGGDFTAAFKVWEDMVSAGLKPD 261
Query: 271 VVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFK 330
+V Y +L++A+ KA R ++AL V E + + PT + Y +LD + G + +A VF
Sbjct: 262 IVIYNILVHAFCKAGRMDKALGVLENIEANRLLPTIETYTSILDGYVKGGNIQKALEVFD 321
Query: 331 CMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVN 390
++ P + SY ++LS A ME A + +G VPN +Y L +GYA+
Sbjct: 322 RIKTAGLRPGVVSYNSLLSGLAKARQMENARLMLNEMLANGVVPNERSYTALTEGYARAG 381
Query: 391 NLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKN 450
++EK ++ +M+ + + + ++ A K+ A ++++ G ++
Sbjct: 382 DVEKAFGMFQRMKKENLAIDIVAYGALLKACCKSGAMQRAAEVFQQITDAGLKHNRITYC 441
Query: 451 ILLSLAKTADERNEANELL 469
+L E ++A +LL
Sbjct: 442 TMLDGWARKGELSKARDLL 460
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 91/356 (25%), Positives = 170/356 (47%), Gaps = 6/356 (1%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
++ + K G+ KA +L M+K G +P+ + + +M+ Y RGG + A ++ M S+G
Sbjct: 198 IVKLFTKAGNMAKALDILEEMDKHGVSPNKMIYAMIMDGYARGGDFTAAFKVWEDMVSAG 257
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
+P + Y I++ F +A + +A V + E + L P + + ++ Y K G +
Sbjct: 258 LKPDIVIYNILVHAFCKAGRMDKALGVLENI---EANRLLPTIETYTSILDGYVKGGNIQ 314
Query: 222 KARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSK---IYDQMQRAGLQPDVVSYALLI 278
KA ++F + G++ V+YNSL+S +++ + ++M G+ P+ SY L
Sbjct: 315 KALEVFDRIKTAGLRPGVVSYNSLLSGLAKARQMENARLMLNEMLANGVVPNERSYTALT 374
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCS 338
Y +A E+A +F+ M + AY LL A SG + +A VF+ +
Sbjct: 375 EGYARAGDVEKAFGMFQRMKKENLAIDIVAYGALLKACCKSGAMQRAAEVFQQITDAGLK 434
Query: 339 PDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEI 398
+ +Y TML + ++ A +++ GF + I Y + IK + + E++ E
Sbjct: 435 HNRITYCTMLDGWARKGELSKARDLLNDMQKHGFHLDTICYTSFIKACFRSGDTEEVTET 494
Query: 399 YDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLS 454
MR ++ N +TT++ + D D A+ Y++ ++ G D N LLS
Sbjct: 495 LAVMREKKLEVNARTYTTLIHGWLAAADPDQAISCYEQAKASGLQLDSALSNCLLS 550
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 74/284 (26%), Positives = 130/284 (45%), Gaps = 3/284 (1%)
Query: 201 KPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVS---K 257
KP + + +++ Y + G AR F M ++ + Y SL+ +++
Sbjct: 14 KPVLREYGLLVDFYARHGDKVAARATFEAMRASHIKPNVHIYTSLIHAYAEARDMEGAVA 73
Query: 258 IYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFA 317
++M G+Q + + +I+ Y A E A FE+ + P YN ++ A+
Sbjct: 74 CTEEMLSQGIQLNEAVFCSIISGYASAGNNEAAEHWFEKFKAENLVPGGIVYNSIVQAYC 133
Query: 318 ISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVI 377
+G ++ + M + ++ YTT+L+ + D E FF RLK G P
Sbjct: 134 QAGNMETVEALLAQMEEEGFQGNLGLYTTVLNGFAEIRDEEKCLSFFHRLKACGLSPTAA 193
Query: 378 TYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEM 437
TYG ++K + K N+ K ++I ++M +G+ PN+ I+ IMD Y + DF +A +++M
Sbjct: 194 TYGCIVKLFTKAGNMAKALDILEEMDKHGVSPNKMIYAMIMDGYARGGDFTAAFKVWEDM 253
Query: 438 ESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGI 481
S G PD NIL+ A ++A +L N P I
Sbjct: 254 VSAGLKPDIVIYNILVHAFCKAGRMDKALGVLENIEANRLLPTI 297
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 78/329 (23%), Positives = 144/329 (43%), Gaps = 41/329 (12%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N+M + M++ Y + GDF A KV M G P +V + L+ A+ + GR A +
Sbjct: 226 NKMIYAMIMDGYARGGDFTAAFKVWEDMVSAGLKPDIVIYNILVHAFCKAGRMDKALGVL 285
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
++++ P+ TY IL +V+ ++A EVF + + + L+P ++ ++
Sbjct: 286 ENIEANRLLPTIETYTSILDGYVKGGNIQKALEVFDRI---KTAGLRPGVVSYNSLLSGL 342
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSK---IYDQMQRAGLQPDV 271
KA E AR + M GV + +Y +L +V K ++ +M++ L D+
Sbjct: 343 AKARQMENARLMLNEMLANGVVPNERSYTALTEGYARAGDVEKAFGMFQRMKKENLAIDI 402
Query: 272 VSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKC 331
V+Y L+ A K+ + A VF+++ DAG++ Y +LD +A G + +AR +
Sbjct: 403 VAYGALLKACCKSGAMQRAAEVFQQITDAGLKHNRITYCTMLDGWARKGELSKARDLLND 462
Query: 332 MRRDRCSPD-IC----------------------------------SYTTMLSAYVNASD 356
M++ D IC +YTT++ ++ A+D
Sbjct: 463 MQKHGFHLDTICYTSFIKACFRSGDTEEVTETLAVMREKKLEVNARTYTTLIHGWLAAAD 522
Query: 357 MEGAEKFFRRLKQDGFVPNVITYGTLIKG 385
+ A + + K G + L+ G
Sbjct: 523 PDQAISCYEQAKASGLQLDSALSNCLLSG 551
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 81/390 (20%), Positives = 147/390 (37%), Gaps = 80/390 (20%)
Query: 129 PSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEV 188
P + + L++ Y R G A A F M++S +P+ Y ++ + EA + A
Sbjct: 15 PVLREYGLLVDFYARHGDKVAARATFEAMRASHIKPNVHIYTSLIHAYAEARDMEGAVAC 74
Query: 189 FMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSF 248
+L + ++ ++ +F +I Y AG E A F + + YNS++
Sbjct: 75 TEEMLSQ---GIQLNEAVFCSIISGYASAGNNEAAEHWFEKFKAENLVPGGIVYNSIVQA 131
Query: 249 ET---NYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPT 305
N + V + QM+ G Q ++ Y ++N + + R EE+ L+ F + G+ PT
Sbjct: 132 YCQAGNMETVEALLAQMEEEGFQGNLGLYTTVLNGFAEIRDEEKCLSFFHRLKACGLSPT 191
Query: 306 HKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFR 365
+Y ++ + A +M A
Sbjct: 192 AA-----------------------------------TYGCIVKLFTKAGNMAKALDILE 216
Query: 366 RLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTI------------ 413
+ + G PN + Y ++ GYA+ + ++++ M G+KP+ I
Sbjct: 217 EMDKHGVSPNKMIYAMIMDGYARGGDFTAAFKVWEDMVSAGLKPDIVIYNILVHAFCKAG 276
Query: 414 -----------------------FTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKN 450
+T+I+D Y K + A+ + +++ G P + N
Sbjct: 277 RMDKALGVLENIEANRLLPTIETYTSILDGYVKGGNIQKALEVFDRIKTAGLRPGVVSYN 336
Query: 451 ILLS-LAKTADERNE---ANELLGNFNHPN 476
LLS LAK N NE+L N PN
Sbjct: 337 SLLSGLAKARQMENARLMLNEMLANGVVPN 366
>gi|302774715|ref|XP_002970774.1| hypothetical protein SELMODRAFT_94312 [Selaginella moellendorffii]
gi|300161485|gb|EFJ28100.1| hypothetical protein SELMODRAFT_94312 [Selaginella moellendorffii]
Length = 497
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 96/407 (23%), Positives = 193/407 (47%), Gaps = 8/407 (1%)
Query: 68 VRLKQLKKWNVVSEVLEWLR-IQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKG 126
+ + L + + LE+ R + N + + +LI K ++A ++L M +G
Sbjct: 84 ILVTGLCRAGKIETALEFFRKMDDRCSPNVITYSVLIDGLCKANRVSQAVELLESMKARG 143
Query: 127 YAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAE 186
+P V+++T L++ + + A + R M +G P+ +TY +L A + +A
Sbjct: 144 CSPDVITYTILVDGLCKESKVAAAWEVLREMLDAGCVPNLVTYNSLLHGLCRARRVSDA- 202
Query: 187 EVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLM 246
+ D P+ + +I K G + A + A M ++G + YN L+
Sbjct: 203 --LALMRDMTCRGCTPNVVTYGTLIDGLCKVGRVKDACAMLADMIDKGGTPDLMIYNMLI 260
Query: 247 SFETNYKEVSKIYDQMQRA---GLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVR 303
+ +V + ++RA G++PDVV+Y+ +I ++ R +EA + + G
Sbjct: 261 NGLCKADQVDESIALLRRAVSGGIKPDVVTYSSVIYGLCRSNRLDEACRLLLYVKSRGCP 320
Query: 304 PTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKF 363
P Y+ L+D +G VD+A +++ M D C D+ +Y+T++ A ++ A
Sbjct: 321 PDVILYSTLIDGLCKAGKVDEAFDLYEVMTGDGCDADVVTYSTLIDGLCKAGRVDEAHLL 380
Query: 364 FRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGK 423
R+ + G P+ +TY +LIKG +N+L++ +E+ ++M + P+ + ++ +
Sbjct: 381 LARMVRMGTPPSTMTYNSLIKGLCDLNHLDEAIELVEEMERSNCAPSAVTYNILIHGMCR 440
Query: 424 NKDFDSAVV-WYKEMESCGFPPDQKAKNILLSLAKTADERNEANELL 469
+ DSA + +++EM G PD +ILL K + + +E L+
Sbjct: 441 MERVDSAALDYFQEMIDNGVIPDHITYSILLEGLKKSKDLHELRHLV 487
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 86/352 (24%), Positives = 160/352 (45%), Gaps = 7/352 (1%)
Query: 131 VVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFM 190
V+S L+ R G+ + A FR+M P+ +TY +++ +AN+ +A E+
Sbjct: 79 VISFNILVTGLCRAGKIETALEFFRKMDDRCS-PNVITYSVLIDGLCKANRVSQAVELLE 137
Query: 191 TLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFET 250
++ + PD + +++ K A ++ M + G + VTYNSL+
Sbjct: 138 SM---KARGCSPDVITYTILVDGLCKESKVAAAWEVLREMLDAGCVPNLVTYNSLLHGLC 194
Query: 251 NYKEVS---KIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHK 307
+ VS + M G P+VV+Y LI+ K R ++A A+ +M+D G P
Sbjct: 195 RARRVSDALALMRDMTCRGCTPNVVTYGTLIDGLCKVGRVKDACAMLADMIDKGGTPDLM 254
Query: 308 AYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRL 367
YN+L++ + VD++ + + PD+ +Y++++ ++ ++ A + +
Sbjct: 255 IYNMLINGLCKADQVDESIALLRRAVSGGIKPDVVTYSSVIYGLCRSNRLDEACRLLLYV 314
Query: 368 KQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDF 427
K G P+VI Y TLI G K +++ ++Y+ M +G + ++T++D K
Sbjct: 315 KSRGCPPDVILYSTLIDGLCKAGKVDEAFDLYEVMTGDGCDADVVTYSTLIDGLCKAGRV 374
Query: 428 DSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEP 479
D A + M G PP N L+ + +EA EL+ N P
Sbjct: 375 DEAHLLLARMVRMGTPPSTMTYNSLIKGLCDLNHLDEAIELVEEMERSNCAP 426
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 86/350 (24%), Positives = 159/350 (45%), Gaps = 8/350 (2%)
Query: 122 MNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANK 181
M G P+VV++ +L++ + A+ +F M+S PS +TY +L K
Sbjct: 1 MRDHGCEPNVVTYNSLIDGLCKNNEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGK 60
Query: 182 FKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVT 241
+ A +F +LD D F++++ +AG E A + F M +R + +T
Sbjct: 61 LERAMALFQEMLDRRSH----DVISFNILVTGLCRAGKIETALEFFRKMDDR-CSPNVIT 115
Query: 242 YNSLMSFETNYKEVSK---IYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEML 298
Y+ L+ VS+ + + M+ G PDV++Y +L++ K + A V EML
Sbjct: 116 YSVLIDGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAAAWEVLREML 175
Query: 299 DAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDME 358
DAG P YN LL + V A + + M C+P++ +Y T++ ++
Sbjct: 176 DAGCVPNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDGLCKVGRVK 235
Query: 359 GAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIM 418
A + G P+++ Y LI G K + +++ + + + GIKP+ +++++
Sbjct: 236 DACAMLADMIDKGGTPDLMIYNMLINGLCKADQVDESIALLRRAVSGGIKPDVVTYSSVI 295
Query: 419 DAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANEL 468
++ D A ++S G PPD + L+ A + +EA +L
Sbjct: 296 YGLCRSNRLDEACRLLLYVKSRGCPPDVILYSTLIDGLCKAGKVDEAFDL 345
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 32/158 (20%), Positives = 77/158 (48%), Gaps = 2/158 (1%)
Query: 332 MRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNN 391
MR C P++ +Y +++ ++ + A++ F +K P+++TY TL+ G +
Sbjct: 1 MRDHGCEPNVVTYNSLIDGLCKNNEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGK 60
Query: 392 LEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNI 451
LE+ M ++ +M ++ + F ++ + ++A+ ++++M+ P+ ++
Sbjct: 61 LERAMALFQEM-LDRRSHDVISFNILVTGLCRAGKIETALEFFRKMDD-RCSPNVITYSV 118
Query: 452 LLSLAKTADERNEANELLGNFNHPNNEPGINGLSISVD 489
L+ A+ ++A ELL + P + +I VD
Sbjct: 119 LIDGLCKANRVSQAVELLESMKARGCSPDVITYTILVD 156
Score = 48.5 bits (114), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 44/195 (22%), Positives = 87/195 (44%), Gaps = 12/195 (6%)
Query: 36 NQIEEVGSAVAVLRSERTRGQPLPKDLVLGTLVRLKQLKKWNVVSEVLEWLRIQSW--WD 93
N+++E A +L ++RG P P ++ TL+ L K V E + + + D
Sbjct: 302 NRLDE---ACRLLLYVKSRGCP-PDVILYSTLI--DGLCKAGKVDEAFDLYEVMTGDGCD 355
Query: 94 FNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAI 153
+ + + LI K G ++A +L+ M + G PS +++ +L++ A +
Sbjct: 356 ADVVTYSTLIDGLCKAGRVDEAHLLLARMVRMGTPPSTMTYNSLIKGLCDLNHLDEAIEL 415
Query: 154 FRRMQSSGPRPSALTYQIILKLFVEANKFKEAE-EVFMTLLDEEKSPLKPDQKMFHMMIY 212
M+ S PSA+TY I++ + A + F ++D + + PD + +++
Sbjct: 416 VEEMERSNCAPSAVTYNILIHGMCRMERVDSAALDYFQEMID---NGVIPDHITYSILLE 472
Query: 213 MYKKAGGYEKARKLF 227
KK+ + R L
Sbjct: 473 GLKKSKDLHELRHLV 487
>gi|410110063|gb|AFV61111.1| pentatricopeptide repeat-containing protein 123, partial [Aloysia
barbata]
Length = 364
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 95/365 (26%), Positives = 176/365 (48%), Gaps = 37/365 (10%)
Query: 111 DFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQ 170
D++KA + S + + G+ P +V++ A++ +G+ ++ A ++ M+ +G P+ +Y
Sbjct: 2 DYSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMKXAGVMPNTTSYS 61
Query: 171 IILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALM 230
+L ++VE KF EA VF + + E K L D ++MI +Y + G ++A KLF M
Sbjct: 62 TLLTMYVENKKFLEALSVF-SEMREIKCLL--DLTTCNIMIDVYGQLGMAKEADKLFWGM 118
Query: 231 AERGVQQSTVTYNSLMSFETN---YKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARRE 287
+ G++ + V+YN+L+ + + E ++ MQR ++ +VV+Y ++ YGK
Sbjct: 119 RKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEH 178
Query: 288 EEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTM 347
E+A + +EM G+ P Y+ ++ + G +D+A +F+ +R D + TM
Sbjct: 179 EKANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQILFQTM 238
Query: 348 LSAY-------------------------------VNASDMEGAEKFFRRLKQDGFVPNV 376
+ AY A +E A FR+ G V ++
Sbjct: 239 IVAYERAGLVAHAKRLLHELKRPDNIPRDTAIHILAGAGRIEEATYVFRQAIDAGEVKDI 298
Query: 377 ITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKE 436
+ +I +K + E++DKMR G P+ + +++AYGK +FD A Y E
Sbjct: 299 TVFERMIHLLSKYKKYSNVXEVFDKMRGLGYFPDSNVIAVVLNAYGKLXEFDKANDVYME 358
Query: 437 MESCG 441
M+ G
Sbjct: 359 MQEVG 363
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 73/263 (27%), Positives = 128/263 (48%), Gaps = 3/263 (1%)
Query: 220 YEKARKLFALMAERGVQQSTVTYNSLMSF---ETNYKEVSKIYDQMQRAGLQPDVVSYAL 276
Y KA +F+ + G V YN++++ ++E + +M+ AG+ P+ SY+
Sbjct: 3 YSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMKXAGVMPNTTSYST 62
Query: 277 LINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDR 336
L+ Y + ++ EAL+VF EM + NI++D + GM +A +F MR+
Sbjct: 63 LLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMG 122
Query: 337 CSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMM 396
P++ SY T+L Y +A A FR +++ NV+TY +++ Y K EK
Sbjct: 123 IEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKAN 182
Query: 397 EIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLA 456
+ +M+ GI+PN ++TI+ +GK D A + ++++ S G DQ ++
Sbjct: 183 NLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQILFQTMIVAY 242
Query: 457 KTADERNEANELLGNFNHPNNEP 479
+ A A LL P+N P
Sbjct: 243 ERAGLVAHAKRLLHELKRPDNIP 265
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/244 (23%), Positives = 114/244 (46%), Gaps = 6/244 (2%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + + L+ YG F +A + M +K +VV++ ++M YG+ ++ A +
Sbjct: 126 NVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLI 185
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
+ MQS G P+++TY I+ ++ + K A +F L S ++ DQ +F MI Y
Sbjct: 186 QEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKL---RSSGVEIDQILFQTMIVAY 242
Query: 215 KKAGGYEKARKLFA-LMAERGVQQSTVTYNSLMSFETNYKEVSKIYDQMQRAGLQPDVVS 273
++AG A++L L + + T + +++ +E + ++ Q AG D+
Sbjct: 243 ERAGLVAHAKRLLHELKRPDNIPRDTAIH--ILAGAGRIEEATYVFRQAIDAGEVKDITV 300
Query: 274 YALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMR 333
+ +I+ K ++ VF++M G P ++L+A+ D+A V+ M+
Sbjct: 301 FERMIHLLSKYKKYSNVXEVFDKMRGLGYFPDSNVIAVVLNAYGKLXEFDKANDVYMEMQ 360
Query: 334 RDRC 337
C
Sbjct: 361 EVGC 364
Score = 62.0 bits (149), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 57/127 (44%)
Query: 355 SDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIF 414
D A F RLK+ GF P+++ Y +I + K + + +M+ G+ PN T +
Sbjct: 1 CDYSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMKXAGVMPNTTSY 60
Query: 415 TTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNH 474
+T++ Y +NK F A+ + EM D NI++ + EA++L
Sbjct: 61 STLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRK 120
Query: 475 PNNEPGI 481
EP +
Sbjct: 121 MGIEPNV 127
>gi|449487696|ref|XP_004157755.1| PREDICTED: uncharacterized protein LOC101223774 [Cucumis sativus]
Length = 1315
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 93/342 (27%), Positives = 171/342 (50%), Gaps = 7/342 (2%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N +++ +I+ K+G +A ++L M K G+ P+V +HT+L+ + G + A +F
Sbjct: 900 NLINYSSMISGLCKRGSVKQAFELLEEMVKNGWKPNVYTHTSLIHGLCKKGWTERAFRLF 959
Query: 155 RRM-QSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYM 213
++ +S +P+ TY ++ + + K AE +F + ++ L P+ + +I
Sbjct: 960 LKLIRSDNYKPNVHTYTAMISGYCKEEKLSRAEMLFERMKEQG---LVPNTNTYTTLIDG 1016
Query: 214 YKKAGGYEKARKLFALMAERGVQQSTVTYNSL---MSFETNYKEVSKIYDQMQRAGLQPD 270
+ KAG + KA +L LM+ G +T TYNS+ + +E K+ + + ++ D
Sbjct: 1017 HCKAGNFSKAYELMELMSNEGFFPNTCTYNSIVDGLCKRGRAEEAFKLLNTGFQNQIEAD 1076
Query: 271 VVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFK 330
V+Y +LI+ K +AL +M G +P Y L+ AF M+ + +F
Sbjct: 1077 GVTYTILISEQCKRADMNQALVFLNKMFKVGFQPDIHLYTTLIAAFCRQNMMKDSEKLFD 1136
Query: 331 CMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVN 390
+ + +P +YT+M+ Y + A KFF+++ G P+ I+YG LI G K +
Sbjct: 1137 EVIKLGLAPTKETYTSMICGYCREKKVSLAVKFFQKMSDHGCAPDSISYGALISGLCKES 1196
Query: 391 NLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVV 432
L++ ++YD M G+ P + T+ Y K +DF SA+V
Sbjct: 1197 RLDEARQLYDTMIDKGLSPCEVTRVTLTYEYCKTEDFASAMV 1238
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 83/371 (22%), Positives = 177/371 (47%), Gaps = 7/371 (1%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
+I Y + G+ +A++ + M ++G+ + T ++ A+ A F ++ G
Sbjct: 837 IIVGYCRNGNVLEADRWICEMMERGFVVDNATLTLIITAFCEKSLVNRAVWFFHKVTKMG 896
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
P+ + Y ++ + K+A E+ ++ K+ KP+ +I+ K G E
Sbjct: 897 LSPNLINYSSMISGLCKRGSVKQAFELLEEMV---KNGWKPNVYTHTSLIHGLCKKGWTE 953
Query: 222 KARKLF-ALMAERGVQQSTVTYNSLMSFETNYKEVSK---IYDQMQRAGLQPDVVSYALL 277
+A +LF L+ + + TY +++S +++S+ ++++M+ GL P+ +Y L
Sbjct: 954 RAFRLFLKLIRSDNYKPNVHTYTAMISGYCKEEKLSRAEMLFERMKEQGLVPNTNTYTTL 1013
Query: 278 INAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRC 337
I+ + KA +A + E M + G P YN ++D G ++A + +++
Sbjct: 1014 IDGHCKAGNFSKAYELMELMSNEGFFPNTCTYNSIVDGLCKRGRAEEAFKLLNTGFQNQI 1073
Query: 338 SPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMME 397
D +YT ++S +DM A F ++ + GF P++ Y TLI + + N ++ +
Sbjct: 1074 EADGVTYTILISEQCKRADMNQALVFLNKMFKVGFQPDIHLYTTLIAAFCRQNMMKDSEK 1133
Query: 398 IYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAK 457
++D++ G+ P + +T+++ Y + K AV ++++M G PD + L+S
Sbjct: 1134 LFDEVIKLGLAPTKETYTSMICGYCREKKVSLAVKFFQKMSDHGCAPDSISYGALISGLC 1193
Query: 458 TADERNEANEL 468
+EA +L
Sbjct: 1194 KESRLDEARQL 1204
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 91/372 (24%), Positives = 171/372 (45%), Gaps = 11/372 (2%)
Query: 73 LKKWNVVSEVLEWLR--IQSWWDFNEMDFLMLITAYGKQGDFNKAEKV-LSFMNKKGYAP 129
L K V + E L +++ W N LI K+G +A ++ L + Y P
Sbjct: 911 LCKRGSVKQAFELLEEMVKNGWKPNVYTHTSLIHGLCKKGWTERAFRLFLKLIRSDNYKP 970
Query: 130 SVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVF 189
+V ++TA++ Y + + AE +F RM+ G P+ TY ++ +A F +A E+
Sbjct: 971 NVHTYTAMISGYCKEEKLSRAEMLFERMKEQGLVPNTNTYTTLIDGHCKAGNFSKAYEL- 1029
Query: 190 MTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFE 249
M L+ E P+ ++ ++ K G E+A KL + ++ VTY L+S +
Sbjct: 1030 MELMSNEG--FFPNTCTYNSIVDGLCKRGRAEEAFKLLNTGFQNQIEADGVTYTILISEQ 1087
Query: 250 TNYKEVSK---IYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTH 306
++++ ++M + G QPD+ Y LI A+ + +++ +F+E++ G+ PT
Sbjct: 1088 CKRADMNQALVFLNKMFKVGFQPDIHLYTTLIAAFCRQNMMKDSEKLFDEVIKLGLAPTK 1147
Query: 307 KAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRR 366
+ Y ++ + V A F+ M C+PD SY ++S S ++ A + +
Sbjct: 1148 ETYTSMICGYCREKKVSLAVKFFQKMSDHGCAPDSISYGALISGLCKESRLDEARQLYDT 1207
Query: 367 LKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKD 426
+ G P +T TL Y K + M I + R+N +T+ T I + K
Sbjct: 1208 MIDKGLSPCEVTRVTLTYEYCKTEDFASAMVILE--RLNKKLWIRTVHTLIRKLCCEKKV 1265
Query: 427 FDSAVVWYKEME 438
+A+ ++K ++
Sbjct: 1266 ALAALFFHKLLD 1277
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 78/328 (23%), Positives = 136/328 (41%), Gaps = 46/328 (14%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPS--VVSHTALMEAYGRGGRYKNAEAIFRRMQS 159
++ + + G +A ++ M +G + V++ L+ A R Y A +F M +
Sbjct: 767 MVGVFAEIGKLKEAVDMILDMRNQGLVLTTRVMNRIILVAAEMRLVEY--AGNVFDEMSA 824
Query: 160 SGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGG 219
G P + TY+ I I Y + G
Sbjct: 825 RGVYPDSCTYKYI--------------------------------------IVGYCRNGN 846
Query: 220 YEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSK---IYDQMQRAGLQPDVVSYAL 276
+A + M ERG T +++ V++ + ++ + GL P++++Y+
Sbjct: 847 VLEADRWICEMMERGFVVDNATLTLIITAFCEKSLVNRAVWFFHKVTKMGLSPNLINYSS 906
Query: 277 LINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQA-RTVFKCMRRD 335
+I+ K ++A + EEM+ G +P + L+ G ++A R K +R D
Sbjct: 907 MISGLCKRGSVKQAFELLEEMVKNGWKPNVYTHTSLIHGLCKKGWTERAFRLFLKLIRSD 966
Query: 336 RCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKM 395
P++ +YT M+S Y + AE F R+K+ G VPN TY TLI G+ K N K
Sbjct: 967 NYKPNVHTYTAMISGYCKEEKLSRAEMLFERMKEQGLVPNTNTYTTLIDGHCKAGNFSKA 1026
Query: 396 MEIYDKMRVNGIKPNQTIFTTIMDAYGK 423
E+ + M G PN + +I+D K
Sbjct: 1027 YELMELMSNEGFFPNTCTYNSIVDGLCK 1054
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 69/288 (23%), Positives = 133/288 (46%), Gaps = 7/288 (2%)
Query: 170 QIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFAL 229
+ ++ +F E K KEA ++ +LD L ++ + +I + + E A +F
Sbjct: 765 ECMVGVFAEIGKLKEAVDM---ILDMRNQGLVLTTRVMNRIILVAAEMRLVEYAGNVFDE 821
Query: 230 MAERGVQQSTVTYNSLM---SFETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARR 286
M+ RGV + TY ++ N E + +M G D + L+I A+ +
Sbjct: 822 MSARGVYPDSCTYKYIIVGYCRNGNVLEADRWICEMMERGFVVDNATLTLIITAFCEKSL 881
Query: 287 EEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTT 346
A+ F ++ G+ P Y+ ++ G V QA + + M ++ P++ ++T+
Sbjct: 882 VNRAVWFFHKVTKMGLSPNLINYSSMISGLCKRGSVKQAFELLEEMVKNGWKPNVYTHTS 941
Query: 347 MLSAYVNASDMEGAEKFFRRL-KQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVN 405
++ E A + F +L + D + PNV TY +I GY K L + ++++M+
Sbjct: 942 LIHGLCKKGWTERAFRLFLKLIRSDNYKPNVHTYTAMISGYCKEEKLSRAEMLFERMKEQ 1001
Query: 406 GIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILL 453
G+ PN +TT++D + K +F A + M + GF P+ N ++
Sbjct: 1002 GLVPNTNTYTTLIDGHCKAGNFSKAYELMELMSNEGFFPNTCTYNSIV 1049
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/277 (22%), Positives = 128/277 (46%), Gaps = 4/277 (1%)
Query: 197 KSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEV- 255
K L+ ++ M+ ++ + G ++A + M +G+ +T N ++ + V
Sbjct: 754 KCNLERAHEVVECMVGVFAEIGKLKEAVDMILDMRNQGLVLTTRVMNRIILVAAEMRLVE 813
Query: 256 --SKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILL 313
++D+M G+ PD +Y +I Y + EA EM++ G + +++
Sbjct: 814 YAGNVFDEMSARGVYPDSCTYKYIIVGYCRNGNVLEADRWICEMMERGFVVDNATLTLII 873
Query: 314 DAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFV 373
AF +V++A F + + SP++ +Y++M+S ++ A + + ++G+
Sbjct: 874 TAFCEKSLVNRAVWFFHKVTKMGLSPNLINYSSMISGLCKRGSVKQAFELLEEMVKNGWK 933
Query: 374 PNVITYGTLIKGYAKVNNLEKMMEIYDKM-RVNGIKPNQTIFTTIMDAYGKNKDFDSAVV 432
PNV T+ +LI G K E+ ++ K+ R + KPN +T ++ Y K + A +
Sbjct: 934 PNVYTHTSLIHGLCKKGWTERAFRLFLKLIRSDNYKPNVHTYTAMISGYCKEEKLSRAEM 993
Query: 433 WYKEMESCGFPPDQKAKNILLSLAKTADERNEANELL 469
++ M+ G P+ L+ A ++A EL+
Sbjct: 994 LFERMKEQGLVPNTNTYTTLIDGHCKAGNFSKAYELM 1030
Score = 52.4 bits (124), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 54/251 (21%), Positives = 106/251 (42%), Gaps = 39/251 (15%)
Query: 23 ADEAGKKNWRRLMNQIEEVGSAVAVLRSERTRGQPLPKDLVLGTLVRLKQLKKWNVVSEV 82
A+EA K NQIE G +L SE+ + + + LV L ++ K ++
Sbjct: 1058 AEEAFKLLNTGFQNQIEADGVTYTILISEQCKRADMNQALVF-----LNKMFKVGFQPDI 1112
Query: 83 LEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYG 142
+ LI A+ +Q +EK+ + K G AP+ ++T+++ Y
Sbjct: 1113 --------------HLYTTLIAAFCRQNMMKDSEKLFDEVIKLGLAPTKETYTSMICGYC 1158
Query: 143 RGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKP 202
R + A F++M G P +++Y ++ + ++ EA +++ T++D+ SP +
Sbjct: 1159 REKKVSLAVKFFQKMSDHGCAPDSISYGALISGLCKESRLDEARQLYDTMIDKGLSPCEV 1218
Query: 203 DQKMFHMMIYMYKKAGGYEKA--------RKLFA---------LMAERGVQQSTVTYNSL 245
+ + Y Y K + A +KL+ L E+ V + + ++ L
Sbjct: 1219 TRV---TLTYEYCKTEDFASAMVILERLNKKLWIRTVHTLIRKLCCEKKVALAALFFHKL 1275
Query: 246 MSFETNYKEVS 256
+ E N V+
Sbjct: 1276 LDKEVNVDRVT 1286
>gi|296085006|emb|CBI28421.3| unnamed protein product [Vitis vinifera]
Length = 740
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 96/351 (27%), Positives = 172/351 (49%), Gaps = 6/351 (1%)
Query: 99 FLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQ 158
+ + ITA +A ++++ M K+G P+V ++TAL+ R G+ + A ++ +M
Sbjct: 306 YTLPITALCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKML 365
Query: 159 SSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAG 218
G P+ +TY ++ +F A ++F + E L Q ++ +I G
Sbjct: 366 KEGLVPNTVTYNALINELCVGGRFSTALKIFHWM--EGHGSLANTQT-YNEIIKGLCLGG 422
Query: 219 GYEKARKLFALMAERGVQQSTVTYNSLMS---FETNYKEVSKIYDQMQRAGLQPDVVSYA 275
EKA LF M + G + VTYN+L++ + N +++ D M+ G +PD +Y
Sbjct: 423 DIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYN 482
Query: 276 LLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRD 335
L++ + K + E A F+EM++ G+ P +Y L+D + G VD A ++ K M
Sbjct: 483 ELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTALIDGHSKDGKVDIALSLLKRMEEM 542
Query: 336 RCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKM 395
C+P++ SY +++ + AEK ++ + G +PNVITY TLI G + +
Sbjct: 543 GCNPNVESYNAVINGLSKENRFSEAEKICDKMVEQGLLPNVITYTTLIDGLCRNGRTQFA 602
Query: 396 MEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQ 446
+I+ M PN +++++ + D A + KEME G PD+
Sbjct: 603 FKIFHDMEKRKCLPNLYTYSSLIYGLCQEGKADEAEILLKEMERKGLAPDE 653
Score = 135 bits (340), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 91/375 (24%), Positives = 181/375 (48%), Gaps = 6/375 (1%)
Query: 97 MDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRR 156
+ F LI K+G +AE +LS + + +P V ++T+L+ + R A +F R
Sbjct: 199 LTFNTLINILSKKGKVREAELILSQIFQYDLSPDVFTYTSLILGHCRNRNLDLAFGVFDR 258
Query: 157 MQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKK 216
M G P+++TY ++ + EA ++ ++++ ++P + + I
Sbjct: 259 MVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKG---IEPTVYTYTLPITALCA 315
Query: 217 AGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVS---KIYDQMQRAGLQPDVVS 273
E+A +L A M +RG + + TY +L+S + ++ +Y +M + GL P+ V+
Sbjct: 316 IEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVT 375
Query: 274 YALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMR 333
Y LIN R AL +F M G + YN ++ + G +++A +F+ M
Sbjct: 376 YNALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKML 435
Query: 334 RDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLE 393
+ P + +Y T+++ Y+ ++ A + +K++G P+ TY L+ G++K LE
Sbjct: 436 KMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLE 495
Query: 394 KMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILL 453
+ +M G+ PN +T ++D + K+ D A+ K ME G P+ ++ N ++
Sbjct: 496 SASFYFQEMVECGLNPNPVSYTALIDGHSKDGKVDIALSLLKRMEEMGCNPNVESYNAVI 555
Query: 454 SLAKTADERNEANEL 468
+ + +EA ++
Sbjct: 556 NGLSKENRFSEAEKI 570
Score = 134 bits (338), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 91/362 (25%), Positives = 168/362 (46%), Gaps = 6/362 (1%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + LI+ + G A + M K+G P+ V++ AL+ GGR+ A IF
Sbjct: 337 NVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTALKIF 396
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
M+ G + TY I+K ++A +F +L + PL P ++ +I Y
Sbjct: 397 HWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKML--KMGPL-PTVVTYNTLINGY 453
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEV---SKIYDQMQRAGLQPDV 271
G A +L LM E G + TYN L+S + + ++ S + +M GL P+
Sbjct: 454 LTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPNP 513
Query: 272 VSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKC 331
VSY LI+ + K + + AL++ + M + G P ++YN +++ + +A +
Sbjct: 514 VSYTALIDGHSKDGKVDIALSLLKRMEEMGCNPNVESYNAVINGLSKENRFSEAEKICDK 573
Query: 332 MRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNN 391
M P++ +YTT++ + A K F +++ +PN+ TY +LI G +
Sbjct: 574 MVEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQEGK 633
Query: 392 LEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNI 451
++ + +M G+ P++ FT+++D + D A + + M G P+ + ++
Sbjct: 634 ADEAEILLKEMERKGLAPDEVTFTSLIDGFVVLGRIDHAFLLLRRMVDMGCKPNYRTYSV 693
Query: 452 LL 453
LL
Sbjct: 694 LL 695
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 84/392 (21%), Positives = 172/392 (43%), Gaps = 41/392 (10%)
Query: 100 LMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQS 159
+++I A + + + L+ ++ G+ S+ S L+ + + A ++++M +
Sbjct: 132 ILMIKACRNEEEIRRVADFLNEISGMGFGFSLYSCNTLLIQLAKFEMVEGARNLYKQMLN 191
Query: 160 SGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGG 219
SG +PS LT+ ++ + + K +EAE + + + L PD + +I + +
Sbjct: 192 SGIQPSLLTFNTLINILSKKGKVREAELILSQIFQYD---LSPDVFTYTSLILGHCRNRN 248
Query: 220 YEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSKIYD------------------- 260
+ A +F M + G ++VTY++L++ N V + D
Sbjct: 249 LDLAFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTL 308
Query: 261 -------------------QMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAG 301
+M++ G +P+V +Y LI+ + + E A+ ++ +ML G
Sbjct: 309 PITALCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEG 368
Query: 302 VRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAE 361
+ P YN L++ + G A +F M + +Y ++ D+E A
Sbjct: 369 LVPNTVTYNALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAM 428
Query: 362 KFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAY 421
F ++ + G +P V+TY TLI GY N+ + D M+ NG +P++ + ++ +
Sbjct: 429 VLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGF 488
Query: 422 GKNKDFDSAVVWYKEMESCGFPPDQKAKNILL 453
K +SA +++EM CG P+ + L+
Sbjct: 489 SKWGKLESASFYFQEMVECGLNPNPVSYTALI 520
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 75/332 (22%), Positives = 154/332 (46%), Gaps = 6/332 (1%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + + LI G F+ A K+ +M G + ++ +++ GG + A +F
Sbjct: 372 NTVTYNALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLF 431
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
+M GP P+ +TY ++ ++ A + + L+ E +PD+ ++ ++ +
Sbjct: 432 EKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARL-LDLMKENGC--EPDEWTYNELVSGF 488
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVS---KIYDQMQRAGLQPDV 271
K G E A F M E G+ + V+Y +L+ + +V + +M+ G P+V
Sbjct: 489 SKWGKLESASFYFQEMVECGLNPNPVSYTALIDGHSKDGKVDIALSLLKRMEEMGCNPNV 548
Query: 272 VSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKC 331
SY +IN K R EA + ++M++ G+ P Y L+D +G A +F
Sbjct: 549 ESYNAVINGLSKENRFSEAEKICDKMVEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHD 608
Query: 332 MRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNN 391
M + +C P++ +Y++++ + AE + +++ G P+ +T+ +LI G+ +
Sbjct: 609 MEKRKCLPNLYTYSSLIYGLCQEGKADEAEILLKEMERKGLAPDEVTFTSLIDGFVVLGR 668
Query: 392 LEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGK 423
++ + +M G KPN ++ ++ K
Sbjct: 669 IDHAFLLLRRMVDMGCKPNYRTYSVLLKGLQK 700
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/206 (22%), Positives = 101/206 (49%)
Query: 249 ETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKA 308
E + V+ +++ G + S L+ K E A ++++ML++G++P+
Sbjct: 141 EEEIRRVADFLNEISGMGFGFSLYSCNTLLIQLAKFEMVEGARNLYKQMLNSGIQPSLLT 200
Query: 309 YNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLK 368
+N L++ + G V +A + + + SPD+ +YT+++ + +++ A F R+
Sbjct: 201 FNTLINILSKKGKVREAELILSQIFQYDLSPDVFTYTSLILGHCRNRNLDLAFGVFDRMV 260
Query: 369 QDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFD 428
++G PN +TY TLI G +++ +++ ++M GI+P +T + A + +
Sbjct: 261 KEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTLPITALCAIEHEE 320
Query: 429 SAVVWYKEMESCGFPPDQKAKNILLS 454
A+ M+ G P+ + L+S
Sbjct: 321 EAIELVARMKKRGCRPNVQTYTALIS 346
>gi|357155349|ref|XP_003577091.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g52620-like [Brachypodium distachyon]
Length = 877
Score = 145 bits (367), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 94/355 (26%), Positives = 169/355 (47%), Gaps = 6/355 (1%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
L++ G++GD K +LS M ++ P+V + ++++A + A + ++M + G
Sbjct: 335 LMSWLGRKGDLEKIASLLSEMRERRLPPNVQIYNSVIDALCKCRSASQALVVLKQMFAGG 394
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
P A+T+ ++ + + +EAE + L + + L P+ + +I+ + G
Sbjct: 395 CDPDAITFSTLISGLCQEGRVQEAERL---LRETTRWELNPNLSSYTSLIHGFCVRGEVI 451
Query: 222 KARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSK---IYDQMQRAGLQPDVVSYALLI 278
A L M ERG VT+ +L+ +VS+ + ++M L PD Y +LI
Sbjct: 452 VASNLLVEMMERGHTPDVVTFGALIHGLVVAGQVSEALLVREKMAARQLLPDANIYNVLI 511
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCS 338
+ K + A + EEML+ V P Y L+D F + +D+AR +F+ M +
Sbjct: 512 SGLCKKKMLPAARNLIEEMLEQNVHPDKYVYTTLIDGFIRNESLDEARKIFEFMEQKGIH 571
Query: 339 PDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEI 398
PD+ Y M+ Y M A + +++ G +P+ TY TLI GYAK N+ + +
Sbjct: 572 PDVVGYNAMIKGYCQFGMMNEAVECMSTMRKVGRIPDEFTYTTLIGGYAKQGNISGALSL 631
Query: 399 YDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILL 453
M +PN ++++++ Y K D D+A + MES G P+ IL+
Sbjct: 632 LCDMMKRRCQPNVVAYSSLINGYCKLGDTDAAECLFGSMESQGLFPNVITYTILI 686
Score = 130 bits (326), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 100/397 (25%), Positives = 176/397 (44%), Gaps = 20/397 (5%)
Query: 30 NWRRLMNQIEEVGSAVAVLRSERTRGQPLPKDLVLGTLVRLKQLKKWNVVSEVLEWLR-- 87
+W +E++ S ++ +R R LP ++ + V + L K S+ L L+
Sbjct: 337 SWLGRKGDLEKIASLLSEMRERR-----LPPNVQIYNSV-IDALCKCRSASQALVVLKQM 390
Query: 88 IQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRY 147
D + + F LI+ ++G +AE++L + P++ S+T+L+ + G
Sbjct: 391 FAGGCDPDAITFSTLISGLCQEGRVQEAERLLRETTRWELNPNLSSYTSLIHGFCVRGEV 450
Query: 148 KNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSP---LKPDQ 204
A + M G P +T+ ++ V A + EA LL EK L PD
Sbjct: 451 IVASNLLVEMMERGHTPDVVTFGALIHGLVVAGQVSEA------LLVREKMAARQLLPDA 504
Query: 205 KMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLM-SFETN--YKEVSKIYDQ 261
+++++I K AR L M E+ V Y +L+ F N E KI++
Sbjct: 505 NIYNVLISGLCKKKMLPAARNLIEEMLEQNVHPDKYVYTTLIDGFIRNESLDEARKIFEF 564
Query: 262 MQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGM 321
M++ G+ PDVV Y +I Y + EA+ M G P Y L+ +A G
Sbjct: 565 MEQKGIHPDVVGYNAMIKGYCQFGMMNEAVECMSTMRKVGRIPDEFTYTTLIGGYAKQGN 624
Query: 322 VDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGT 381
+ A ++ M + RC P++ +Y+++++ Y D + AE F ++ G PNVITY
Sbjct: 625 ISGALSLLCDMMKRRCQPNVVAYSSLINGYCKLGDTDAAECLFGSMESQGLFPNVITYTI 684
Query: 382 LIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIM 418
LI K + + + ++ M +N PN +++
Sbjct: 685 LIGSLFKKDKVVRAAMYFEYMLLNQCSPNDYTLHSLV 721
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 88/346 (25%), Positives = 153/346 (44%), Gaps = 6/346 (1%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + + +LI Y ++GD + +L M KG P+VV++ LM GR G + ++
Sbjct: 293 NAVFYNVLIDGYCRRGDVGRGILLLGEMEAKGLLPTVVTYGTLMSWLGRKGDLEKIASLL 352
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
M+ P+ Y ++ K + A + + L PD F +I
Sbjct: 353 SEMRERRLPPNVQIYNSVIDALC---KCRSASQALVVLKQMFAGGCDPDAITFSTLISGL 409
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEV---SKIYDQMQRAGLQPDV 271
+ G ++A +L + + +Y SL+ EV S + +M G PDV
Sbjct: 410 CQEGRVQEAERLLRETTRWELNPNLSSYTSLIHGFCVRGEVIVASNLLVEMMERGHTPDV 469
Query: 272 VSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKC 331
V++ LI+ A + EAL V E+M + P YN+L+ M+ AR + +
Sbjct: 470 VTFGALIHGLVVAGQVSEALLVREKMAARQLLPDANIYNVLISGLCKKKMLPAARNLIEE 529
Query: 332 MRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNN 391
M PD YTT++ ++ ++ A K F ++Q G P+V+ Y +IKGY +
Sbjct: 530 MLEQNVHPDKYVYTTLIDGFIRNESLDEARKIFEFMEQKGIHPDVVGYNAMIKGYCQFGM 589
Query: 392 LEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEM 437
+ + +E MR G P++ +TT++ Y K + A+ +M
Sbjct: 590 MNEAVECMSTMRKVGRIPDEFTYTTLIGGYAKQGNISGALSLLCDM 635
Score = 105 bits (262), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 85/391 (21%), Positives = 164/391 (41%), Gaps = 24/391 (6%)
Query: 32 RRLMNQIEEVGSAVAVLRSERTRGQPL------------PKDLVLGTLVRLKQLKKWNVV 79
RRL ++ S + L R+ Q L P + TL+ L + V
Sbjct: 358 RRLPPNVQIYNSVIDALCKCRSASQALVVLKQMFAGGCDPDAITFSTLI--SGLCQEGRV 415
Query: 80 SEVLEWLRIQSWWDFNE--MDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTAL 137
E LR + W+ N + LI + +G+ A +L M ++G+ P VV+ AL
Sbjct: 416 QEAERLLRETTRWELNPNLSSYTSLIHGFCVRGEVIVASNLLVEMMERGHTPDVVTFGAL 475
Query: 138 MEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEK 197
+ G+ A + +M + P A Y +++ + A + +L++
Sbjct: 476 IHGLVVAGQVSEALLVREKMAARQLLPDANIYNVLISGLCKKKMLPAARNLIEEMLEQN- 534
Query: 198 SPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNY---KE 254
+ PD+ ++ +I + + ++ARK+F M ++G+ V YN+++ + E
Sbjct: 535 --VHPDKYVYTTLIDGFIRNESLDEARKIFEFMEQKGIHPDVVGYNAMIKGYCQFGMMNE 592
Query: 255 VSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLD 314
+ M++ G PD +Y LI Y K AL++ +M+ +P AY+ L++
Sbjct: 593 AVECMSTMRKVGRIPDEFTYTTLIGGYAKQGNISGALSLLCDMMKRRCQPNVVAYSSLIN 652
Query: 315 AFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVP 374
+ G D A +F M P++ +YT ++ + + A +F + + P
Sbjct: 653 GYCKLGDTDAAECLFGSMESQGLFPNVITYTILIGSLFKKDKVVRAAMYFEYMLLNQCSP 712
Query: 375 NVITYGTLIKGYAKVNNLEKMMEIYDKMRVN 405
N T +L+ G N++ ++ + VN
Sbjct: 713 NDYTLHSLVTGLC--NSMASIISSHCSSTVN 741
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 58/255 (22%), Positives = 119/255 (46%), Gaps = 3/255 (1%)
Query: 202 PDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSF---ETNYKEVSKI 258
P+ ++++I Y + G + L M +G+ + VTY +LMS+ + + ++++ +
Sbjct: 292 PNAVFYNVLIDGYCRRGDVGRGILLLGEMEAKGLLPTVVTYGTLMSWLGRKGDLEKIASL 351
Query: 259 YDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAI 318
+M+ L P+V Y +I+A K R +AL V ++M G P ++ L+
Sbjct: 352 LSEMRERRLPPNVQIYNSVIDALCKCRSASQALVVLKQMFAGGCDPDAITFSTLISGLCQ 411
Query: 319 SGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVIT 378
G V +A + + R +P++ SYT+++ + ++ A + + G P+V+T
Sbjct: 412 EGRVQEAERLLRETTRWELNPNLSSYTSLIHGFCVRGEVIVASNLLVEMMERGHTPDVVT 471
Query: 379 YGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEME 438
+G LI G + + + + +KM + P+ I+ ++ K K +A +EM
Sbjct: 472 FGALIHGLVVAGQVSEALLVREKMAARQLLPDANIYNVLISGLCKKKMLPAARNLIEEML 531
Query: 439 SCGFPPDQKAKNILL 453
PD+ L+
Sbjct: 532 EQNVHPDKYVYTTLI 546
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 70/308 (22%), Positives = 125/308 (40%), Gaps = 21/308 (6%)
Query: 101 MLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSS 160
+LI+ K+ A ++ M ++ P +T L++ + R A IF M+
Sbjct: 509 VLISGLCKKKMLPAARNLIEEMLEQNVHPDKYVYTTLIDGFIRNESLDEARKIFEFMEQK 568
Query: 161 GPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGY 220
G P + Y ++K + + EA E T+ K PD+ + +I Y K G
Sbjct: 569 GIHPDVVGYNAMIKGYCQFGMMNEAVECMSTM---RKVGRIPDEFTYTTLIGGYAKQGNI 625
Query: 221 EKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSK---IYDQMQRAGLQPDVVSYALL 277
A L M +R Q + V Y+SL++ + ++ M+ GL P+V++Y +L
Sbjct: 626 SGALSLLCDMMKRRCQPNVVAYSSLINGYCKLGDTDAAECLFGSMESQGLFPNVITYTIL 685
Query: 278 INAYGKARREEEALAVFEEMLDAGVRPT----HKAYNILLDAFA--ISGMVDQART---- 327
I + K + A FE ML P H L ++ A IS
Sbjct: 686 IGSLFKKDKVVRAAMYFEYMLLNQCSPNDYTLHSLVTGLCNSMASIISSHCSSTVNLHGK 745
Query: 328 -----VFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTL 382
+F+ + DRC P +Y ++ + + + A ++ G+ P+ T+ +L
Sbjct: 746 GALLDIFRALVNDRCDPRNSAYNAIIFSLCIHNMLGEALDLKNKMANKGYKPDSATFLSL 805
Query: 383 IKGYAKVN 390
+ G+ V
Sbjct: 806 LYGFCSVG 813
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 76/339 (22%), Positives = 137/339 (40%), Gaps = 10/339 (2%)
Query: 134 HTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVE-ANKFKEAEEVFMTL 192
H+AL+ R GR+ +A R M +G + T + L A+ EA+ M
Sbjct: 153 HSALLRLLARAGRFDAVDATLRDMSLAGAAAAVPTRACLGALVATYADAGMEAKAAEMCQ 212
Query: 193 LDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLF--ALMAERGVQQ-STVTYNSLMSFE 249
E P + ++ + + ++ ARKL+ L E G ST + E
Sbjct: 213 RAREHHGTLPGATHTNRLLRLLVERRRWDDARKLYDEMLAEESGADDYSTCVMVRGLCLE 272
Query: 250 TNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAY 309
++ K+ + AG P+ V Y +LI+ Y + + + EM G+ PT Y
Sbjct: 273 GLVEKGLKLIEARWGAGCVPNAVFYNVLIDGYCRRGDVGRGILLLGEMEAKGLLPTVVTY 332
Query: 310 NILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQ 369
L+ G +++ ++ MR R P++ Y +++ A A +++
Sbjct: 333 GTLMSWLGRKGDLEKIASLLSEMRERRLPPNVQIYNSVIDALCKCRSASQALVVLKQMFA 392
Query: 370 DGFVPNVITYGTLIKGYA---KVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKD 426
G P+ IT+ TLI G +V E+++ + +N PN + +T+++ + +
Sbjct: 393 GGCDPDAITFSTLISGLCQEGRVQEAERLLRETTRWELN---PNLSSYTSLIHGFCVRGE 449
Query: 427 FDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEA 465
A EM G PD L+ A + +EA
Sbjct: 450 VIVASNLLVEMMERGHTPDVVTFGALIHGLVVAGQVSEA 488
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/267 (22%), Positives = 113/267 (42%), Gaps = 7/267 (2%)
Query: 210 MIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEV---SKIYDQMQRA- 265
++ + +AG ++ M+ G + T L + Y + +K + QRA
Sbjct: 156 LLRLLARAGRFDAVDATLRDMSLAGAAAAVPTRACLGALVATYADAGMEAKAAEMCQRAR 215
Query: 266 ---GLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMV 322
G P L+ + RR ++A +++EML + +++ + G+V
Sbjct: 216 EHHGTLPGATHTNRLLRLLVERRRWDDARKLYDEMLAEESGADDYSTCVMVRGLCLEGLV 275
Query: 323 DQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTL 382
++ + + C P+ Y ++ Y D+ ++ G +P V+TYGTL
Sbjct: 276 EKGLKLIEARWGAGCVPNAVFYNVLIDGYCRRGDVGRGILLLGEMEAKGLLPTVVTYGTL 335
Query: 383 IKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGF 442
+ + +LEK+ + +MR + PN I+ +++DA K + A+V K+M + G
Sbjct: 336 MSWLGRKGDLEKIASLLSEMRERRLPPNVQIYNSVIDALCKCRSASQALVVLKQMFAGGC 395
Query: 443 PPDQKAKNILLSLAKTADERNEANELL 469
PD + L+S EA LL
Sbjct: 396 DPDAITFSTLISGLCQEGRVQEAERLL 422
>gi|222637660|gb|EEE67792.1| hypothetical protein OsJ_25528 [Oryza sativa Japonica Group]
Length = 475
Score = 145 bits (367), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 90/372 (24%), Positives = 173/372 (46%), Gaps = 6/372 (1%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + + L+ AY ++ D ++ ++L M +G P+V ++T L++ EA+F
Sbjct: 101 NALCYNSLLDAYTREKDDDRVAEMLKVMENEGIEPTVGTYTILVDGLSAARDITKVEAVF 160
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
M+S Y ++ + A + A EVF + + ++P++ + +I +
Sbjct: 161 EEMKSKNLSGDVYFYSSVINAYCRAGNVRRASEVFDECVG---NGIEPNEHTYGALINGF 217
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSK---IYDQMQRAGLQPDV 271
K G E A L M RGV + + +N+++ V K I M++ G++ DV
Sbjct: 218 CKIGQMEAAEMLVTDMQVRGVGINQIVFNTMIDGYCRKNMVDKALEIKMIMEKMGIELDV 277
Query: 272 VSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKC 331
+Y L +A R +EA + M++ GVRP H +Y L+ G + +AR +F+
Sbjct: 278 YTYNTLACGLRRANRMDEAKNLLRIMIEKGVRPNHVSYTTLISIHCNEGDMVEARRLFRE 337
Query: 332 MRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNN 391
M + P + +Y M+ Y+ + AE+F +++ G VP++ +Y L+ G+
Sbjct: 338 MAGNGAEPSLVTYNVMMDGYIKKGSIREAERFKNEMEKKGLVPDIYSYAALVHGHCVNGK 397
Query: 392 LEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNI 451
++ + ++++M+ G KPN +T ++ K + A Y M G PD +
Sbjct: 398 VDVALRLFEEMKQRGSKPNLVAYTALISGLAKEGRSEEAFQLYDNMLGDGLTPDDALYSA 457
Query: 452 LLSLAKTADERN 463
L+ T ++N
Sbjct: 458 LVGSLHTDKKQN 469
Score = 118 bits (295), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 87/376 (23%), Positives = 170/376 (45%), Gaps = 8/376 (2%)
Query: 101 MLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSS 160
+++ Y K G A ++L M + G + + + +L++AY R + + M++
Sbjct: 72 VVVDGYCKSGRVAHARQLLDEMPRHGVKVNALCYNSLLDAYTREKDDDRVAEMLKVMENE 131
Query: 161 GPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSP-LKPDQKMFHMMIYMYKKAGG 219
G P+ TY I++ A + E VF +E KS L D + +I Y +AG
Sbjct: 132 GIEPTVGTYTILVDGLSAARDITKVEAVF----EEMKSKNLSGDVYFYSSVINAYCRAGN 187
Query: 220 YEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSK---IYDQMQRAGLQPDVVSYAL 276
+A ++F G++ + TY +L++ ++ + MQ G+ + + +
Sbjct: 188 VRRASEVFDECVGNGIEPNEHTYGALINGFCKIGQMEAAEMLVTDMQVRGVGINQIVFNT 247
Query: 277 LINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDR 336
+I+ Y + ++AL + M G+ YN L + +D+A+ + + M
Sbjct: 248 MIDGYCRKNMVDKALEIKMIMEKMGIELDVYTYNTLACGLRRANRMDEAKNLLRIMIEKG 307
Query: 337 CSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMM 396
P+ SYTT++S + N DM A + FR + +G P+++TY ++ GY K ++ +
Sbjct: 308 VRPNHVSYTTLISIHCNEGDMVEARRLFREMAGNGAEPSLVTYNVMMDGYIKKGSIREAE 367
Query: 397 EIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLA 456
++M G+ P+ + ++ + N D A+ ++EM+ G P+ A L+S
Sbjct: 368 RFKNEMEKKGLVPDIYSYAALVHGHCVNGKVDVALRLFEEMKQRGSKPNLVAYTALISGL 427
Query: 457 KTADERNEANELLGNF 472
EA +L N
Sbjct: 428 AKEGRSEEAFQLYDNM 443
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 71/279 (25%), Positives = 127/279 (45%), Gaps = 3/279 (1%)
Query: 214 YKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKE---VSKIYDQMQRAGLQPD 270
Y K+G AR+L M GV+ + + YNSL+ T K+ V+++ M+ G++P
Sbjct: 77 YCKSGRVAHARQLLDEMPRHGVKVNALCYNSLLDAYTREKDDDRVAEMLKVMENEGIEPT 136
Query: 271 VVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFK 330
V +Y +L++ AR + AVFEEM + Y+ +++A+ +G V +A VF
Sbjct: 137 VGTYTILVDGLSAARDITKVEAVFEEMKSKNLSGDVYFYSSVINAYCRAGNVRRASEVFD 196
Query: 331 CMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVN 390
+ P+ +Y +++ + ME AE ++ G N I + T+I GY + N
Sbjct: 197 ECVGNGIEPNEHTYGALINGFCKIGQMEAAEMLVTDMQVRGVGINQIVFNTMIDGYCRKN 256
Query: 391 NLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKN 450
++K +EI M GI+ + + T+ + D A + M G P+ +
Sbjct: 257 MVDKALEIKMIMEKMGIELDVYTYNTLACGLRRANRMDEAKNLLRIMIEKGVRPNHVSYT 316
Query: 451 ILLSLAKTADERNEANELLGNFNHPNNEPGINGLSISVD 489
L+S+ + EA L EP + ++ +D
Sbjct: 317 TLISIHCNEGDMVEARRLFREMAGNGAEPSLVTYNVMMD 355
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 71/272 (26%), Positives = 114/272 (41%), Gaps = 42/272 (15%)
Query: 263 QRAGLQPDVV---SYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFA-- 317
Q A PD V S +++++ Y K+ R A + +EM GV+ YN LLDA+
Sbjct: 56 QAATSCPDSVTPLSASVVVDGYCKSGRVAHARQLLDEMPRHGVKVNALCYNSLLDAYTRE 115
Query: 318 ----------------------------ISGM-----VDQARTVFKCMRRDRCSPDICSY 344
+ G+ + + VF+ M+ S D+ Y
Sbjct: 116 KDDDRVAEMLKVMENEGIEPTVGTYTILVDGLSAARDITKVEAVFEEMKSKNLSGDVYFY 175
Query: 345 TTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRV 404
+++++AY A ++ A + F +G PN TYG LI G+ K+ +E + M+V
Sbjct: 176 SSVINAYCRAGNVRRASEVFDECVGNGIEPNEHTYGALINGFCKIGQMEAAEMLVTDMQV 235
Query: 405 NGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNE 464
G+ NQ +F T++D Y + D A+ ME G D N L + A+ +E
Sbjct: 236 RGVGINQIVFNTMIDGYCRKNMVDKALEIKMIMEKMGIELDVYTYNTLACGLRRANRMDE 295
Query: 465 ANELLGNF----NHPNNEPGINGLSISVDEED 492
A LL PN+ +SI +E D
Sbjct: 296 AKNLLRIMIEKGVRPNHVSYTTLISIHCNEGD 327
>gi|110738150|dbj|BAF01006.1| hypothetical protein [Arabidopsis thaliana]
Length = 642
Score = 145 bits (367), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 90/357 (25%), Positives = 172/357 (48%), Gaps = 6/357 (1%)
Query: 85 WLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRG 144
W R Q + N ++ L+ D ++ V S + K + +V + AL++++G+
Sbjct: 123 WSRKQKKYTHNLECYVSLVDVLALAKDVDRIRFVSSEIKKFEFPMTVSAANALIKSFGKL 182
Query: 145 GRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQ 204
G + ++R+M+ +G P+ TY ++ V A AE VF + E +KPD
Sbjct: 183 GMVEELLWVWRKMKENGIEPTLYTYNFLMNGLVSAMFVDSAERVFEVM---ESGRIKPDI 239
Query: 205 KMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSF---ETNYKEVSKIYDQ 261
++ MI Y KAG +KA + M RG + +TY +++ ++++ +Y +
Sbjct: 240 VTYNTMIKGYCKAGQTQKAMEKLRDMETRGHEADKITYMTMIQACYADSDFGSCVALYQE 299
Query: 262 MQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGM 321
M G+Q +++L+I K + E VFE M+ G +P Y +L+D +A SG
Sbjct: 300 MDEKGIQVPPHAFSLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGYAKSGS 359
Query: 322 VDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGT 381
V+ A + M + PD+ +Y+ +++ +E A +F + DG N + Y +
Sbjct: 360 VEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFHTCRFDGLAINSMFYSS 419
Query: 382 LIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEME 438
LI G K +++ ++++M G + + ++DA+ K++ D A+ +K ME
Sbjct: 420 LIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYNALIDAFTKHRKVDEAIALFKRME 476
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 63/235 (26%), Positives = 115/235 (48%), Gaps = 7/235 (2%)
Query: 99 FLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQ 158
F ++I K+G N+ V M +KG P+V +T L++ Y + G ++A + RM
Sbjct: 312 FSLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMI 371
Query: 159 SSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAG 218
G +P +TY +++ + + +EA + F T L + + +I KAG
Sbjct: 372 DEGFKPDVVTYSVVVNGLCKNGRVEEALDYFHTC---RFDGLAINSMFYSSLIDGLGKAG 428
Query: 219 GYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSKIYDQMQRA----GLQPDVVSY 274
++A +LF M+E+G + + YN+L+ T +++V + +R G V +Y
Sbjct: 429 RVDEAERLFEEMSEKGCTRDSYCYNALIDAFTKHRKVDEAIALFKRMEEEEGCDQTVYTY 488
Query: 275 ALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVF 329
+L++ K R EEAL +++ M+D G+ PT + L +SG V +A +
Sbjct: 489 TILLSGMFKEHRNEEALKLWDMMIDKGITPTAACFRALSTGLCLSGKVARACKIL 543
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 95/222 (42%), Gaps = 36/222 (16%)
Query: 269 PDVVSYA-LLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQART 327
P VS A LI ++GK EE L V+ +M + G+ PT YN L++ + VD A
Sbjct: 166 PMTVSAANALIKSFGKLGMVEELLWVWRKMKENGIEPTLYTYNFLMNGLVSAMFVDSAER 225
Query: 328 VFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIK--- 384
VF+ M R PDI +Y TM+ Y A + A + R ++ G + ITY T+I+
Sbjct: 226 VFEVMESGRIKPDIVTYNTMIKGYCKAGQTQKAMEKLRDMETRGHEADKITYMTMIQACY 285
Query: 385 --------------------------------GYAKVNNLEKMMEIYDKMRVNGIKPNQT 412
G K L + +++ M G KPN
Sbjct: 286 ADSDFGSCVALYQEMDEKGIQVPPHAFSLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVA 345
Query: 413 IFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLS 454
I+T ++D Y K+ + A+ M GF PD +++++
Sbjct: 346 IYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVN 387
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 92/185 (49%)
Query: 305 THKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFF 364
T A N L+ +F GMV++ V++ M+ + P + +Y +++ V+A ++ AE+ F
Sbjct: 168 TVSAANALIKSFGKLGMVEELLWVWRKMKENGIEPTLYTYNFLMNGLVSAMFVDSAERVF 227
Query: 365 RRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKN 424
++ P+++TY T+IKGY K +K ME M G + ++ + T++ A +
Sbjct: 228 EVMESGRIKPDIVTYNTMIKGYCKAGQTQKAMEKLRDMETRGHEADKITYMTMIQACYAD 287
Query: 425 KDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGINGL 484
DF S V Y+EM+ G A ++++ + NE + N ++P +
Sbjct: 288 SDFGSCVALYQEMDEKGIQVPPHAFSLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIY 347
Query: 485 SISVD 489
++ +D
Sbjct: 348 TVLID 352
>gi|414588908|tpg|DAA39479.1| TPA: chloroplast RNA splicing4 [Zea mays]
Length = 1438
Score = 145 bits (367), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 120/483 (24%), Positives = 217/483 (44%), Gaps = 61/483 (12%)
Query: 27 GKKNWRRLMNQIEEVGSAVAVLRSERTRGQPLPKDLVLGTLVRLKQLKKWNVVSEVLEWL 86
G+ +WRR ++ E + RS + + +VLG L R +Q ++ EV +L
Sbjct: 166 GESSWRRALDAFEWLA------RSSAPASRAVA--VVLGVLGRARQD---SIAEEV--FL 212
Query: 87 RIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGR 146
R ++ F ++ Y + G F+ A ++L M+ +G P +VS L+ A + G
Sbjct: 213 RFAGEGATVQV-FNAMMGVYARSGRFDDARQLLDTMHDRGIDPDLVSFNTLINARSKSGC 271
Query: 147 YKNAEAI--FRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQ 204
A+ ++ SG RP +TY ++ +++ ++A VF ++ E +PD
Sbjct: 272 LAAGVALDLLFEVRQSGLRPDVITYNTLISACSQSSNLEDAVTVFEDMIASE---CRPDL 328
Query: 205 KMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLM------------------ 246
++ M+ ++ + G E+A +LF + E+G +TYNSL+
Sbjct: 329 WTYNAMVSVHGRCGKAEEAERLFRELVEKGFMPDAITYNSLLYAFAKEGNVDKVEHTCEQ 388
Query: 247 ----SFETN----------YKEVSKI------YDQMQRAGLQPDVVSYALLINAYGKARR 286
F+ N Y ++ ++ YD+M+ G PD V+Y ++I++ GK R
Sbjct: 389 LVKAGFKKNEITYNTMIHMYGKMGRLDLAVGLYDEMRAMGCTPDAVTYTVMIDSLGKMNR 448
Query: 287 EEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTT 346
EA V E+M DAG++PT A++ L+ A+A G A F CM PD +Y
Sbjct: 449 IAEAGKVLEDMTDAGLKPTLIAFSALICAYAKGGRRADAENTFDCMIASGVKPDRLAYLV 508
Query: 347 MLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNG 406
ML + + D E +R++ D + P+ Y L+ AK + E++ E+ M +
Sbjct: 509 MLDVFARSGDTEKMLCLYRKMMNDNYRPDDDMYQVLLVALAKEDKCEEIEEVIQDMELL- 567
Query: 407 IKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEAN 466
+ N I +T++ K + K+ G+ PD K+ +++ ++ E
Sbjct: 568 CRMNLGIISTMLI---KARCVSQGAKLLKKACLQGYKPDIKSLRSIMNAYVMTEKHEEGL 624
Query: 467 ELL 469
LL
Sbjct: 625 SLL 627
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 98/404 (24%), Positives = 176/404 (43%), Gaps = 8/404 (1%)
Query: 72 QLKKWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSV 131
++K W +++ LR S D + LI AY + G + KA V M K G P+V
Sbjct: 758 KIKLWQQAEILVKGLRQASGIDRRIWN--ALIHAYAESGLYEKARAVFDNMIKTGPLPTV 815
Query: 132 VSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMT 191
S +M A GR + +Q + S T ++L F +A E +++
Sbjct: 816 DSVNGMMRALIVDGRLDELYVVVEELQDMNFKISKSTVLLLLDAFAKAGDVFEVMKIYNG 875
Query: 192 LLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFET- 250
+ + + P+ ++ MI + + + A M G + N+L++ T
Sbjct: 876 M---KAAGYLPNMHLYRSMISLLCHHNRFRDVELMIAEMEGAGFKPDLAILNALLNMYTA 932
Query: 251 --NYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKA 308
N+ +++Y + AGL+PD +Y LI Y ++ R EE + EM G+ P ++
Sbjct: 933 AGNFDRTTQVYRSILEAGLEPDEDTYNTLIVMYCRSFRPEEGFTLLNEMGKRGLTPKLQS 992
Query: 309 YNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLK 368
Y LL A A + + +QA +F+ MR + Y M+ Y NA + AE +K
Sbjct: 993 YKSLLAASAKAELREQADQIFEEMRSKSYQLNRSIYHMMMKIYRNAGNHSKAENLLAVMK 1052
Query: 369 QDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFD 428
+DG P + T L+ Y + + + ++ + ++ + ++T+ DAY KN D++
Sbjct: 1053 EDGIEPTIATMHILMTSYGTAGQPREAENVLNNLKSSSLEVSTLPYSTVFDAYLKNGDYN 1112
Query: 429 SAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNF 472
EM+ G PD + + A ++ +A LL +
Sbjct: 1113 HGTTKLLEMKRDGVEPDHQVWTCFIRAASLCEQTADAILLLKSL 1156
Score = 128 bits (322), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 92/407 (22%), Positives = 178/407 (43%), Gaps = 10/407 (2%)
Query: 67 LVRLKQLKKWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKG 126
+VR W + EWL S + ++ + +Q AE+V F+ G
Sbjct: 161 VVRAVGESSWRRALDAFEWLARSSAPASRAVAVVLGVLGRARQDSI--AEEV--FLRFAG 216
Query: 127 YAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAE 186
+V A+M Y R GR+ +A + M G P +++ ++ ++ A
Sbjct: 217 EGATVQVFNAMMGVYARSGRFDDARQLLDTMHDRGIDPDLVSFNTLINARSKSGCL--AA 274
Query: 187 EVFMTLLDE-EKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSL 245
V + LL E +S L+PD ++ +I ++ E A +F M + TYN++
Sbjct: 275 GVALDLLFEVRQSGLRPDVITYNTLISACSQSSNLEDAVTVFEDMIASECRPDLWTYNAM 334
Query: 246 MSFETNY---KEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGV 302
+S +E +++ ++ G PD ++Y L+ A+ K ++ E+++ AG
Sbjct: 335 VSVHGRCGKAEEAERLFRELVEKGFMPDAITYNSLLYAFAKEGNVDKVEHTCEQLVKAGF 394
Query: 303 RPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEK 362
+ YN ++ + G +D A ++ MR C+PD +YT M+ + + + A K
Sbjct: 395 KKNEITYNTMIHMYGKMGRLDLAVGLYDEMRAMGCTPDAVTYTVMIDSLGKMNRIAEAGK 454
Query: 363 FFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYG 422
+ G P +I + LI YAK +D M +G+KP++ + ++D +
Sbjct: 455 VLEDMTDAGLKPTLIAFSALICAYAKGGRRADAENTFDCMIASGVKPDRLAYLVMLDVFA 514
Query: 423 KNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELL 469
++ D + + Y++M + + PD +LL D+ E E++
Sbjct: 515 RSGDTEKMLCLYRKMMNDNYRPDDDMYQVLLVALAKEDKCEEIEEVI 561
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 81/379 (21%), Positives = 160/379 (42%), Gaps = 36/379 (9%)
Query: 100 LMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQS 159
+++I AYGK + +AE ++ + + + + AL+ AY G Y+ A A+F M
Sbjct: 750 VIIIEAYGKIKLWQQAEILVKGLRQASGIDRRIWN-ALIHAYAESGLYEKARAVFDNMIK 808
Query: 160 SGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGG 219
+GP P+ + +++ + + +E+++ + + + K + +++ + KAG
Sbjct: 809 TGPLPTVDSVNGMMRALIVDGRL---DELYVVVEELQDMNFKISKSTVLLLLDAFAKAG- 864
Query: 220 YEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSKIYDQMQRAGLQPDVVSYALLIN 279
+ EV KIY+ M+ AG P++ Y +I+
Sbjct: 865 -------------------------------DVFEVMKIYNGMKAAGYLPNMHLYRSMIS 893
Query: 280 AYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSP 339
R + + EM AG +P N LL+ + +G D+ V++ + P
Sbjct: 894 LLCHHNRFRDVELMIAEMEGAGFKPDLAILNALLNMYTAAGNFDRTTQVYRSILEAGLEP 953
Query: 340 DICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIY 399
D +Y T++ Y + E + + G P + +Y +L+ AK E+ +I+
Sbjct: 954 DEDTYNTLIVMYCRSFRPEEGFTLLNEMGKRGLTPKLQSYKSLLAASAKAELREQADQIF 1013
Query: 400 DKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTA 459
++MR + N++I+ +M Y + A M+ G P +IL++ TA
Sbjct: 1014 EEMRSKSYQLNRSIYHMMMKIYRNAGNHSKAENLLAVMKEDGIEPTIATMHILMTSYGTA 1073
Query: 460 DERNEANELLGNFNHPNNE 478
+ EA +L N + E
Sbjct: 1074 GQPREAENVLNNLKSSSLE 1092
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 93/424 (21%), Positives = 187/424 (44%), Gaps = 26/424 (6%)
Query: 67 LVRLKQLKKWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKG 126
LV L + K + EV++ + + M+ ++ T K ++ K+L +G
Sbjct: 545 LVALAKEDKCEEIEEVIQDMEL-----LCRMNLGIISTMLIKARCVSQGAKLLKKACLQG 599
Query: 127 YAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAE 186
Y P + S ++M AY +++ ++ + L + + L A
Sbjct: 600 YKPDIKSLRSIMNAYVMTEKHEEGLSLLECICEHVSFSQDLISECSIMLLCRKQTSISAY 659
Query: 187 EVFMTLLDEEKSPLK-PDQK--MFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYN 243
E + ++ LK PDQ ++ +I +A + +A ++F M G++ S Y
Sbjct: 660 EQY-----SQRLMLKYPDQNCNLYEYLITCLIEAEFFSEACQVFCDMQFIGIEASKSIYE 714
Query: 244 SLMS--FETNYKEVS-KIYDQMQRAGLQPDVVSY-ALLINAYGKARREEEALAVFEEMLD 299
S++S + + E + ++ D ++G+ +++S ++I AYGK + ++A E+L
Sbjct: 715 SIISTYCKLGFPETAHRLMDDALQSGIPLNILSCRVIIIEAYGKIKLWQQA-----EILV 769
Query: 300 AGVRPT----HKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNAS 355
G+R + +N L+ A+A SG+ ++AR VF M + P + S M+ A +
Sbjct: 770 KGLRQASGIDRRIWNALIHAYAESGLYEKARAVFDNMIKTGPLPTVDSVNGMMRALIVDG 829
Query: 356 DMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFT 415
++ L+ F + T L+ +AK ++ ++M+IY+ M+ G PN ++
Sbjct: 830 RLDELYVVVEELQDMNFKISKSTVLLLLDAFAKAGDVFEVMKIYNGMKAAGYLPNMHLYR 889
Query: 416 TIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHP 475
+++ + F + EME GF PD N LL++ A + ++ +
Sbjct: 890 SMISLLCHHNRFRDVELMIAEMEGAGFKPDLAILNALLNMYTAAGNFDRTTQVYRSILEA 949
Query: 476 NNEP 479
EP
Sbjct: 950 GLEP 953
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 87/390 (22%), Positives = 166/390 (42%), Gaps = 53/390 (13%)
Query: 28 KKNWRRLMNQIEEVG---SAVAVLRSERTRGQPLPK-DLVLGTLVRL---KQLKKWNVVS 80
++ W L++ E G A AV + G PLP D V G + L +L + VV
Sbjct: 780 RRIWNALIHAYAESGLYEKARAVFDNMIKTG-PLPTVDSVNGMMRALIVDGRLDELYVVV 838
Query: 81 EVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEA 140
E L+ + + ++ L+L+ A+ K GD + K+ + M GY P++ + +++
Sbjct: 839 EELQDMNFK----ISKSTVLLLLDAFAKAGDVFEVMKIYNGMKAAGYLPNMHLYRSMISL 894
Query: 141 YGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPL 200
R+++ E + M+ +G +P +L ++ A F +V+ ++L+ + L
Sbjct: 895 LCHHNRFRDVELMIAEMEGAGFKPDLAILNALLNMYTAAGNFDRTTQVYRSILE---AGL 951
Query: 201 KPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLM-------------- 246
+PD+ ++ +I MY ++ E+ L M +RG+ +Y SL+
Sbjct: 952 EPDEDTYNTLIVMYCRSFRPEEGFTLLNEMGKRGLTPKLQSYKSLLAASAKAELREQADQ 1011
Query: 247 --------SFETN---YKEVSKIYDQ-------------MQRAGLQPDVVSYALLINAYG 282
S++ N Y + KIY M+ G++P + + +L+ +YG
Sbjct: 1012 IFEEMRSKSYQLNRSIYHMMMKIYRNAGNHSKAENLLAVMKEDGIEPTIATMHILMTSYG 1071
Query: 283 KARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDIC 342
A + EA V + + + + Y+ + DA+ +G + T M+RD PD
Sbjct: 1072 TAGQPREAENVLNNLKSSSLEVSTLPYSTVFDAYLKNGDYNHGTTKLLEMKRDGVEPDHQ 1131
Query: 343 SYTTMLSAYVNASDMEGAEKFFRRLKQDGF 372
+T + A A + L+ GF
Sbjct: 1132 VWTCFIRAASLCEQTADAILLLKSLQDCGF 1161
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 79/388 (20%), Positives = 166/388 (42%), Gaps = 6/388 (1%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
LIT + F++A +V M G S + +++ Y + G + A + SG
Sbjct: 681 LITCLIEAEFFSEACQVFCDMQFIGIEASKSIYESIISTYCKLGFPETAHRLMDDALQSG 740
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
+ L+ ++I+ K + E+ + L + D+++++ +I+ Y ++G YE
Sbjct: 741 IPLNILSCRVIIIEAYGKIKLWQQAEILVKGLRQASGI---DRRIWNALIHAYAESGLYE 797
Query: 222 KARKLFALMAERGVQQSTVTYNSLMS---FETNYKEVSKIYDQMQRAGLQPDVVSYALLI 278
KAR +F M + G + + N +M + E+ + +++Q + + LL+
Sbjct: 798 KARAVFDNMIKTGPLPTVDSVNGMMRALIVDGRLDELYVVVEELQDMNFKISKSTVLLLL 857
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCS 338
+A+ KA E + ++ M AG P Y ++ + M
Sbjct: 858 DAFAKAGDVFEVMKIYNGMKAAGYLPNMHLYRSMISLLCHHNRFRDVELMIAEMEGAGFK 917
Query: 339 PDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEI 398
PD+ +L+ Y A + + + +R + + G P+ TY TLI Y + E+ +
Sbjct: 918 PDLAILNALLNMYTAAGNFDRTTQVYRSILEAGLEPDEDTYNTLIVMYCRSFRPEEGFTL 977
Query: 399 YDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKT 458
++M G+ P + +++ A K + + A ++EM S + ++ ++++ + +
Sbjct: 978 LNEMGKRGLTPKLQSYKSLLAASAKAELREQADQIFEEMRSKSYQLNRSIYHMMMKIYRN 1037
Query: 459 ADERNEANELLGNFNHPNNEPGINGLSI 486
A ++A LL EP I + I
Sbjct: 1038 AGNHSKAENLLAVMKEDGIEPTIATMHI 1065
>gi|356540349|ref|XP_003538652.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
mitochondrial-like [Glycine max]
Length = 1024
Score = 145 bits (367), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 104/434 (23%), Positives = 178/434 (41%), Gaps = 104/434 (23%)
Query: 107 GKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSA 166
G+ GD LS + K+ + P V + ++ ++ A I RM+S P+
Sbjct: 254 GRCGD------ALSLLEKEEFVPDTVFYNRMVSGLCEASLFQEAMDILDRMRSISCIPNV 307
Query: 167 LTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKL 226
+TY+I+L + + + + ++ E P+++MF+ +++ Y K+ Y A KL
Sbjct: 308 VTYRILLSGCLGKGQLGRCKRILSMMMTE---GCYPNREMFNSLVHAYCKSRDYSYAYKL 364
Query: 227 FALMAERGVQQSTVTYNSLMS-------------FETNYKEVSKIYD------------- 260
F M + G Q + YN + E K S++ D
Sbjct: 365 FKKMIKCGCQPGYLLYNIFIGSICSNEELPGSDLLELAEKAYSEMLDLGVVLNKVNVSNF 424
Query: 261 ------------------QMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGV 302
+M G PD +Y+ +I A + E+A +FEEM G+
Sbjct: 425 ARCLCGAGKFDKAFEIICEMMSKGFVPDDSTYSKVIGFLCDASKVEKAFLLFEEMKKNGI 484
Query: 303 RPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEK 362
P+ Y IL+D+F +G++ QAR F M RD C+P++ +YT+++ AY+ A + A K
Sbjct: 485 VPSVYTYTILIDSFCKAGLIQQARNWFDEMLRDNCTPNVVTYTSLIHAYLKARKVFDANK 544
Query: 363 FFRRLKQDGFVPNV---------------------------------------------- 376
F + +G PNV
Sbjct: 545 LFEMMLLEGSKPNVVTYTALIDGHCKAGQIDKACQIYARMQGDIESSDIDMYFKLDDNDC 604
Query: 377 -----ITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAV 431
ITYG L+ G K N +E+ E+ D M VNG +PNQ ++ ++D + K ++A
Sbjct: 605 ETPNIITYGALVDGLCKANRVEEAHELLDTMSVNGCEPNQIVYDALIDGFCKTGKLENAQ 664
Query: 432 VWYKEMESCGFPPD 445
+ +M G+ P+
Sbjct: 665 EVFVKMSERGYCPN 678
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 94/379 (24%), Positives = 177/379 (46%), Gaps = 22/379 (5%)
Query: 110 GDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTY 169
G F+KA +++ M KG+ P +++ ++ + + A +F M+ +G PS TY
Sbjct: 432 GKFDKAFEIICEMMSKGFVPDDSTYSKVIGFLCDASKVEKAFLLFEEMKKNGIVPSVYTY 491
Query: 170 QIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFAL 229
I++ F +A ++A F +L + +P + + +I+ Y KA A KLF +
Sbjct: 492 TILIDSFCKAGLIQQARNWFDEMLRDNCTP---NVVTYTSLIHAYLKARKVFDANKLFEM 548
Query: 230 MAERGVQQSTVTYNSLMSFETNYKEVSK---IYDQMQ----------------RAGLQPD 270
M G + + VTY +L+ ++ K IY +MQ P+
Sbjct: 549 MLLEGSKPNVVTYTALIDGHCKAGQIDKACQIYARMQGDIESSDIDMYFKLDDNDCETPN 608
Query: 271 VVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFK 330
+++Y L++ KA R EEA + + M G P Y+ L+D F +G ++ A+ VF
Sbjct: 609 IITYGALVDGLCKANRVEEAHELLDTMSVNGCEPNQIVYDALIDGFCKTGKLENAQEVFV 668
Query: 331 CMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVN 390
M P++ +Y++++++ ++ K ++ ++ PNV+ Y +I G KV
Sbjct: 669 KMSERGYCPNLYTYSSLINSLFKEKRLDLVLKVLSKMLENSCTPNVVIYTDMIDGLCKVG 728
Query: 391 NLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKN 450
E+ + KM G PN +T ++D +GK + + Y++M S G P+
Sbjct: 729 KTEEAYRLMLKMEEVGCYPNVITYTAMIDGFGKIGKIEQCLELYRDMCSKGCAPNFITYR 788
Query: 451 ILLSLAKTADERNEANELL 469
+L++ + +EA+ LL
Sbjct: 789 VLINHCCSTGLLDEAHRLL 807
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 87/366 (23%), Positives = 177/366 (48%), Gaps = 28/366 (7%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + + LI AY K A K+ M +G P+VV++TAL++ + + G+ A I+
Sbjct: 522 NVVTYTSLIHAYLKARKVFDANKLFEMMLLEGSKPNVVTYTALIDGHCKAGQIDKACQIY 581
Query: 155 RRMQ----------------SSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKS 198
RMQ + P+ +TY ++ +AN+ +EA E+ T+ +
Sbjct: 582 ARMQGDIESSDIDMYFKLDDNDCETPNIITYGALVDGLCKANRVEEAHELLDTM---SVN 638
Query: 199 PLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKE---- 254
+P+Q ++ +I + K G E A+++F M+ERG + TY+SL++ + +KE
Sbjct: 639 GCEPNQIVYDALIDGFCKTGKLENAQEVFVKMSERGYCPNLYTYSSLIN--SLFKEKRLD 696
Query: 255 -VSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILL 313
V K+ +M P+VV Y +I+ K + EEA + +M + G P Y ++
Sbjct: 697 LVLKVLSKMLENSCTPNVVIYTDMIDGLCKVGKTEEAYRLMLKMEEVGCYPNVITYTAMI 756
Query: 314 DAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFV 373
D F G ++Q +++ M C+P+ +Y +++ + ++ A + +KQ +
Sbjct: 757 DGFGKIGKIEQCLELYRDMCSKGCAPNFITYRVLINHCCSTGLLDEAHRLLDEMKQTYWP 816
Query: 374 PNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVW 433
++ +Y +I+G+ + + + D++ N P ++++ ++D + K + A+
Sbjct: 817 RHISSYRKIIEGFNR--EFITSIGLLDELSENESVPVESLYRILIDNFIKAGRLEGALNL 874
Query: 434 YKEMES 439
+E+ S
Sbjct: 875 LEEISS 880
Score = 115 bits (287), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 80/348 (22%), Positives = 153/348 (43%), Gaps = 25/348 (7%)
Query: 99 FLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQ 158
+ +LI ++ K G +A M + P+VV++T+L+ AY + + +A +F M
Sbjct: 491 YTILIDSFCKAGLIQQARNWFDEMLRDNCTPNVVTYTSLIHAYLKARKVFDANKLFEMML 550
Query: 159 SSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAG 218
G +P+ +TY ++ +A + +A +++ + + +S D M+
Sbjct: 551 LEGSKPNVVTYTALIDGHCKAGQIDKACQIYARMQGDIES---SDIDMY----------- 596
Query: 219 GYEKARKLFALMAERGVQQSTVTYNSL---MSFETNYKEVSKIYDQMQRAGLQPDVVSYA 275
F L + +TY +L + +E ++ D M G +P+ + Y
Sbjct: 597 --------FKLDDNDCETPNIITYGALVDGLCKANRVEEAHELLDTMSVNGCEPNQIVYD 648
Query: 276 LLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRD 335
LI+ + K + E A VF +M + G P Y+ L+++ +D V M +
Sbjct: 649 ALIDGFCKTGKLENAQEVFVKMSERGYCPNLYTYSSLINSLFKEKRLDLVLKVLSKMLEN 708
Query: 336 RCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKM 395
C+P++ YT M+ E A + ++++ G PNVITY +I G+ K+ +E+
Sbjct: 709 SCTPNVVIYTDMIDGLCKVGKTEEAYRLMLKMEEVGCYPNVITYTAMIDGFGKIGKIEQC 768
Query: 396 MEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFP 443
+E+Y M G PN + +++ D A EM+ +P
Sbjct: 769 LELYRDMCSKGCAPNFITYRVLINHCCSTGLLDEAHRLLDEMKQTYWP 816
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 92/425 (21%), Positives = 175/425 (41%), Gaps = 17/425 (4%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
LI + G +N A + L + GY S ++ AL++ + R + A + R M +SG
Sbjct: 176 LIQKCCRNGMWNVALEELGRLKDFGYKASPTTYNALIQVFLRADKLDTAFLVHREMSNSG 235
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
R T +A + +A ++LL++E+ PD ++ M+ +A ++
Sbjct: 236 FRMDGCTLGCFAYSLCKAGRCGDA----LSLLEKEE--FVPDTVFYNRMVSGLCEASLFQ 289
Query: 222 KARKLFALMAERGVQQSTVTYNSLMSF---ETNYKEVSKIYDQMQRAGLQPDVVSYALLI 278
+A + M + VTY L+S + +I M G P+ + L+
Sbjct: 290 EAMDILDRMRSISCIPNVVTYRILLSGCLGKGQLGRCKRILSMMMTEGCYPNREMFNSLV 349
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAI------SGMVDQARTVFKCM 332
+AY K+R A +F++M+ G +P + YNI + + S +++ A + M
Sbjct: 350 HAYCKSRDYSYAYKLFKKMIKCGCQPGYLLYNIFIGSICSNEELPGSDLLELAEKAYSEM 409
Query: 333 RRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNL 392
+ + + A + A + + GFVP+ TY +I + +
Sbjct: 410 LDLGVVLNKVNVSNFARCLCGAGKFDKAFEIICEMMSKGFVPDDSTYSKVIGFLCDASKV 469
Query: 393 EKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNIL 452
EK ++++M+ NGI P+ +T ++D++ K A W+ EM P+ L
Sbjct: 470 EKAFLLFEEMKKNGIVPSVYTYTILIDSFCKAGLIQQARNWFDEMLRDNCTPNVVTYTSL 529
Query: 453 LSLAKTADERNEANELLGNFNHPNNEPGINGLSISVDEEDDDDDDDEDDDDNIYHDGDGD 512
+ A + +AN+L ++P + + +D D+ IY GD
Sbjct: 530 IHAYLKARKVFDANKLFEMMLLEGSKPNVVTYTALIDGHCKAGQIDKACQ--IYARMQGD 587
Query: 513 GDGDD 517
+ D
Sbjct: 588 IESSD 592
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 77/354 (21%), Positives = 160/354 (45%), Gaps = 20/354 (5%)
Query: 59 PKDLVLGTLVRLKQLKKWNVVSEVLEWLRIQSW--WDFNEMDFLMLITAYGKQGDFNKAE 116
P + G LV L K N V E E L S + N++ + LI + K G A+
Sbjct: 607 PNIITYGALV--DGLCKANRVEEAHELLDTMSVNGCEPNQIVYDALIDGFCKTGKLENAQ 664
Query: 117 KVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLF 176
+V M+++GY P++ ++++L+ + + R + +M + P+ + Y ++
Sbjct: 665 EVFVKMSERGYCPNLYTYSSLINSLFKEKRLDLVLKVLSKMLENSCTPNVVIYTDMIDGL 724
Query: 177 VEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQ 236
+ K EE + +L E+ P+ + MI + K G E+ +L+ M +G
Sbjct: 725 CKVGK---TEEAYRLMLKMEEVGCYPNVITYTAMIDGFGKIGKIEQCLELYRDMCSKGCA 781
Query: 237 QSTVTYNSLMSFETN---YKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAV 293
+ +TY L++ + E ++ D+M++ + SY +I + R ++ +
Sbjct: 782 PNFITYRVLINHCCSTGLLDEAHRLLDEMKQTYWPRHISSYRKIIEGFN--REFITSIGL 839
Query: 294 FEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICS-----YTTML 348
+E+ + P Y IL+D F +G ++ A + + SP + YT+++
Sbjct: 840 LDELSENESVPVESLYRILIDNFIKAGRLEGALNL---LEEISSSPSLAVANKYLYTSLI 896
Query: 349 SAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKM 402
+ +AS ++ A + + + VP + T+ LIKG +V ++ +++ D +
Sbjct: 897 ESLSHASKVDKAFELYASMINKNVVPELSTFVHLIKGLTRVGKWQEALQLSDSI 950
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 62/295 (21%), Positives = 117/295 (39%), Gaps = 40/295 (13%)
Query: 161 GPRPSALTYQIILKLFV--EANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAG 218
G + + Y +++L N + + + M + D+++ L+ K+ + +I + G
Sbjct: 128 GYSHTPVVYNALIELLCCNAVNNDRVSHKFLMQIRDDDRELLR---KLLNFLIQKCCRNG 184
Query: 219 GYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSKIYDQMQRAGLQPDVVSYALLI 278
+ A + + + G + S TYN+ LI
Sbjct: 185 MWNVALEELGRLKDFGYKASPTTYNA--------------------------------LI 212
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCS 338
+ +A + + A V EM ++G R + +G A ++ + ++
Sbjct: 213 QVFLRADKLDTAFLVHREMSNSGFRMDGCTLGCFAYSLCKAGRCGDALSL---LEKEEFV 269
Query: 339 PDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEI 398
PD Y M+S AS + A R++ +PNV+TY L+ G L + I
Sbjct: 270 PDTVFYNRMVSGLCEASLFQEAMDILDRMRSISCIPNVVTYRILLSGCLGKGQLGRCKRI 329
Query: 399 YDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILL 453
M G PN+ +F +++ AY K++D+ A +K+M CG P NI +
Sbjct: 330 LSMMMTEGCYPNREMFNSLVHAYCKSRDYSYAYKLFKKMIKCGCQPGYLLYNIFI 384
>gi|224095732|ref|XP_002310456.1| predicted protein [Populus trichocarpa]
gi|222853359|gb|EEE90906.1| predicted protein [Populus trichocarpa]
Length = 721
Score = 145 bits (366), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 109/442 (24%), Positives = 186/442 (42%), Gaps = 66/442 (14%)
Query: 108 KQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSAL 167
K G + +A LS + K+ + P V +T ++ ++ A RM++S P+ L
Sbjct: 22 KSGKWREA---LSLLEKEEFVPDTVLYTKMISGLCEASLFEEAMDFLTRMRASSCLPNVL 78
Query: 168 TYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLF 227
TY+I+L + K + + ++ E P ++F+ +++ Y ++G Y A KL
Sbjct: 79 TYRILLCGCLNKEKLGRCKRILSMMITE---GCYPSPRIFNSLVHAYCRSGDYAYAYKLL 135
Query: 228 ALMAERGVQQSTVTYNSLM----SFETNYKEV----SKIYDQMQRAGLQ----------- 268
M + G Q V YN L+ S E K+V K Y +M AG+
Sbjct: 136 KKMVQCGCQPGYVVYNILIGGICSSEEPGKDVLDLAEKAYGEMLEAGVVLNKVNISNFSR 195
Query: 269 ------------------------PDVVSYALLINAYGKARREEEALAVFEEMLDAGVRP 304
PD +Y+ +I A + E+A +F+EM G+ P
Sbjct: 196 CLCGIGKFEKAYNVIREMMSKGFIPDTSTYSKVIGYLCNASKVEKAFQLFQEMKRNGIAP 255
Query: 305 THKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFF 364
Y L+D+F +G ++QAR F M RD C+P++ +YT ++ AY+ + + A + +
Sbjct: 256 DVYVYTTLIDSFCKAGFIEQARNWFDEMERDGCAPNVVTYTALIHAYLKSRKVSKANEVY 315
Query: 365 RRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMR---------------VNGI-- 407
+ G PN++TY LI G K +EK +IY M+ V+G
Sbjct: 316 EMMLSKGCTPNIVTYTALIDGLCKAGKIEKASQIYKIMKKENVEIPDVDMHFRVVDGASN 375
Query: 408 KPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANE 467
+PN + ++D K A K M G P+ + L+ A + +EA E
Sbjct: 376 EPNVFTYGALVDGLCKAYQVKEARDLLKSMSVEGCEPNHVVYDALIDGCCKAGKLDEAQE 435
Query: 468 LLGNFNHPNNEPGINGLSISVD 489
+ +P + S +D
Sbjct: 436 VFTTMLECGYDPNVYTYSSLID 457
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 94/376 (25%), Positives = 170/376 (45%), Gaps = 28/376 (7%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + + +L+ + + +++LS M +G PS +L+ AY R G Y A +
Sbjct: 76 NVLTYRILLCGCLNKEKLGRCKRILSMMITEGCYPSPRIFNSLVHAYCRSGDYAYAYKLL 135
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANK-----FKEAEEVFMTLLDEEKSPLKPDQKMFHM 209
++M G +P + Y I++ + + AE+ + +L+ K + F
Sbjct: 136 KKMVQCGCQPGYVVYNILIGGICSSEEPGKDVLDLAEKAYGEMLEAGVVLNKVNISNFSR 195
Query: 210 MIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSK---IYDQMQRAG 266
+ G +EKA + M +G T TY+ ++ + N +V K ++ +M+R G
Sbjct: 196 CLC---GIGKFEKAYNVIREMMSKGFIPDTSTYSKVIGYLCNASKVEKAFQLFQEMKRNG 252
Query: 267 LQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQAR 326
+ PDV Y LI+++ KA E+A F+EM G P Y L+ A+ S V +A
Sbjct: 253 IAPDVYVYTTLIDSFCKAGFIEQARNWFDEMERDGCAPNVVTYTALIHAYLKSRKVSKAN 312
Query: 327 TVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGF-------------- 372
V++ M C+P+I +YT ++ A +E A + ++ +K++
Sbjct: 313 EVYEMMLSKGCTPNIVTYTALIDGLCKAGKIEKASQIYKIMKKENVEIPDVDMHFRVVDG 372
Query: 373 ---VPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDS 429
PNV TYG L+ G K +++ ++ M V G +PN ++ ++D K D
Sbjct: 373 ASNEPNVFTYGALVDGLCKAYQVKEARDLLKSMSVEGCEPNHVVYDALIDGCCKAGKLDE 432
Query: 430 AVVWYKEMESCGFPPD 445
A + M CG+ P+
Sbjct: 433 AQEVFTTMLECGYDPN 448
Score = 134 bits (338), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 89/381 (23%), Positives = 177/381 (46%), Gaps = 25/381 (6%)
Query: 110 GDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTY 169
G F KA V+ M KG+ P +++ ++ + + A +F+ M+ +G P Y
Sbjct: 201 GKFEKAYNVIREMMSKGFIPDTSTYSKVIGYLCNASKVEKAFQLFQEMKRNGIAPDVYVY 260
Query: 170 QIILKLFVEANKFKEAEEVFMTLLDE-EKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFA 228
++ F +A ++A F DE E+ P+ + +I+ Y K+ KA +++
Sbjct: 261 TTLIDSFCKAGFIEQARNWF----DEMERDGCAPNVVTYTALIHAYLKSRKVSKANEVYE 316
Query: 229 LMAERGVQQSTVTYNSL---MSFETNYKEVSKIYDQMQR-----------------AGLQ 268
+M +G + VTY +L + ++ S+IY M++ A +
Sbjct: 317 MMLSKGCTPNIVTYTALIDGLCKAGKIEKASQIYKIMKKENVEIPDVDMHFRVVDGASNE 376
Query: 269 PDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTV 328
P+V +Y L++ KA + +EA + + M G P H Y+ L+D +G +D+A+ V
Sbjct: 377 PNVFTYGALVDGLCKAYQVKEARDLLKSMSVEGCEPNHVVYDALIDGCCKAGKLDEAQEV 436
Query: 329 FKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAK 388
F M P++ +Y++++ ++ A K ++ ++ PNV+ Y +I G K
Sbjct: 437 FTTMLECGYDPNVYTYSSLIDRLFKDKRLDLALKVLSKMLENSCAPNVVIYTEMIDGLCK 496
Query: 389 VNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKA 448
V ++ ++ M G PN +T ++D +GK+ + + ++M S G P+
Sbjct: 497 VGKTDEAYKLMVMMEEKGCNPNVVTYTAMIDGFGKSGRVEKCLELLQQMSSKGCAPNFVT 556
Query: 449 KNILLSLAKTADERNEANELL 469
+L++ + +EA++LL
Sbjct: 557 YRVLINHCCSTGLLDEAHKLL 577
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 90/350 (25%), Positives = 158/350 (45%), Gaps = 23/350 (6%)
Query: 114 KAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIIL 173
KA ++ M + G AP V +T L++++ + G + A F M+ G P+ +TY ++
Sbjct: 240 KAFQLFQEMKRNGIAPDVYVYTTLIDSFCKAGFIEQARNWFDEMERDGCAPNVVTYTALI 299
Query: 174 KLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAER 233
++++ K +A EV+ +L + +P + + +I KAG EKA +++ +M +
Sbjct: 300 HAYLKSRKVSKANEVYEMMLSKGCTP---NIVTYTALIDGLCKAGKIEKASQIYKIMKKE 356
Query: 234 GVQQSTV-----------------TYNSL---MSFETNYKEVSKIYDQMQRAGLQPDVVS 273
V+ V TY +L + KE + M G +P+ V
Sbjct: 357 NVEIPDVDMHFRVVDGASNEPNVFTYGALVDGLCKAYQVKEARDLLKSMSVEGCEPNHVV 416
Query: 274 YALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMR 333
Y LI+ KA + +EA VF ML+ G P Y+ L+D +D A V M
Sbjct: 417 YDALIDGCCKAGKLDEAQEVFTTMLECGYDPNVYTYSSLIDRLFKDKRLDLALKVLSKML 476
Query: 334 RDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLE 393
+ C+P++ YT M+ + A K +++ G PNV+TY +I G+ K +E
Sbjct: 477 ENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMVMMEEKGCNPNVVTYTAMIDGFGKSGRVE 536
Query: 394 KMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFP 443
K +E+ +M G PN + +++ D A +EM+ +P
Sbjct: 537 KCLELLQQMSSKGCAPNFVTYRVLINHCCSTGLLDEAHKLLEEMKQTYWP 586
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 101/413 (24%), Positives = 188/413 (45%), Gaps = 46/413 (11%)
Query: 89 QSWWDFNEMD--------FLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEA 140
++W+D E D + LI AY K +KA +V M KG P++V++TAL++
Sbjct: 277 RNWFDEMERDGCAPNVVTYTALIHAYLKSRKVSKANEVYEMMLSKGCTPNIVTYTALIDG 336
Query: 141 YGRGGRYKNAEAI-----------------FRRMQSSGPRPSALTYQIILKLFVEANKFK 183
+ G+ + A I FR + + P+ TY ++ +A + K
Sbjct: 337 LCKAGKIEKASQIYKIMKKENVEIPDVDMHFRVVDGASNEPNVFTYGALVDGLCKAYQVK 396
Query: 184 EAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYN 243
EA ++ ++ E +P+ ++ +I KAG ++A+++F M E G + TY+
Sbjct: 397 EARDLLKSMSVE---GCEPNHVVYDALIDGCCKAGKLDEAQEVFTTMLECGYDPNVYTYS 453
Query: 244 SLMS--FETNYKEVS-KIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDA 300
SL+ F+ +++ K+ +M P+VV Y +I+ K + +EA + M +
Sbjct: 454 SLIDRLFKDKRLDLALKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMVMMEEK 513
Query: 301 GVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGA 360
G P Y ++D F SG V++ + + M C+P+ +Y +++ + ++ A
Sbjct: 514 GCNPNVVTYTAMIDGFGKSGRVEKCLELLQQMSSKGCAPNFVTYRVLINHCCSTGLLDEA 573
Query: 361 EKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRV--NGIKPNQTIFTTIM 418
K +KQ + +V Y +I+G+ N E + +Y + N P ++ ++
Sbjct: 574 HKLLEEMKQTYWPRHVAGYRKVIEGF----NREFIASLYLSFEISENDSVPVAPVYRVLI 629
Query: 419 DAYGKNKDFDSAVVWYKEMESCGFPPDQKA-KNIL------LSLAKTADERNE 464
D + K + A+ +E+ S F P A +NI LSLA AD+ E
Sbjct: 630 DNFIKAGRLEIALELNEELSS--FSPFSAANQNIHITLIENLSLAHKADKAFE 680
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 77/348 (22%), Positives = 140/348 (40%), Gaps = 45/348 (12%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + L+ K +A +L M+ +G P+ V + AL++ + G+ A+ +F
Sbjct: 378 NVFTYGALVDGLCKAYQVKEARDLLKSMSVEGCEPNHVVYDALIDGCCKAGKLDEAQEVF 437
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
M G P+ TY ++ + + A +V +L+ +P + ++ MI
Sbjct: 438 TTMLECGYDPNVYTYSSLIDRLFKDKRLDLALKVLSKMLENSCAP---NVVIYTEMIDGL 494
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSKIYD---QMQRAGLQPDV 271
K G ++A KL +M E+G + VTY +++ V K + QM G P+
Sbjct: 495 CKVGKTDEAYKLMVMMEEKGCNPNVVTYTAMIDGFGKSGRVEKCLELLQQMSSKGCAPNF 554
Query: 272 VSYALLINAYGKARREEEALAVFEEMLD-------AGVR--------------------- 303
V+Y +LIN +EA + EEM AG R
Sbjct: 555 VTYRVLINHCCSTGLLDEAHKLLEEMKQTYWPRHVAGYRKVIEGFNREFIASLYLSFEIS 614
Query: 304 -----PTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICS----YTTMLSAYVNA 354
P Y +L+D F +G ++ A + + SP + + T++ A
Sbjct: 615 ENDSVPVAPVYRVLIDNFIKAGRLEIALELNE--ELSSFSPFSAANQNIHITLIENLSLA 672
Query: 355 SDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKM 402
+ A + + + G +P + LIKG +VN E+ +++ D +
Sbjct: 673 HKADKAFELYADMISRGSIPELSILVHLIKGLLRVNRWEEALQLLDSI 720
>gi|297849764|ref|XP_002892763.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297338605|gb|EFH69022.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 804
Score = 145 bits (366), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 103/402 (25%), Positives = 184/402 (45%), Gaps = 16/402 (3%)
Query: 85 WLRIQSWWDF--NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYG 142
+LR W D + + F ++++Y K G + A+ + K G PSV SH L+
Sbjct: 228 FLRTSEWKDIGPSVVSFNSIMSSYCKLGFVDMAKSFFCTVLKCGLVPSVYSHNILINGLC 287
Query: 143 RGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKP 202
G A + M G P ++TY I++K F A EV +LD+ L P
Sbjct: 288 LVGSIAEALELASDMNKHGVEPDSVTYNILVKGFHLLGMISGAGEVIQDMLDK---GLSP 344
Query: 203 DQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQ-QSTVTYNSLMSFETNYKEV----SK 257
D + +++ + G + L M RG + +S + Y+ ++S V S
Sbjct: 345 DVITYTILLCGQCQLGNIDMGLILLKDMLSRGFELKSIIPYSVMLSGLCKTGRVDEALSL 404
Query: 258 IYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFA 317
YD ++ GL PD+V+Y+++I+ K + + A+ V++EM + P + ++
Sbjct: 405 FYD-LEAYGLTPDLVAYSIVIHGLCKLGKFDMAVRVYDEMCYKRILPNSRTLGAIMLGLC 463
Query: 318 ISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVI 377
GM+ +AR++ + + DI Y ++ Y + +E A + F+ + G PNV
Sbjct: 464 QKGMLLEARSLLDSLISSGDTLDIILYNIVIDGYAKSGCIEEALELFKVAIESGITPNVA 523
Query: 378 TYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEM 437
T+ +LI GY K N+ + +I D +++ G+ P+ +TT+MDAY S +EM
Sbjct: 524 TFNSLIYGYCKTQNIAEARKILDVIKLYGLVPSVVSYTTLMDAYANCGSIKSIEELRREM 583
Query: 438 ESCGFPPDQKAKNILLSLAKTADERNEANE-----LLGNFNH 474
++ G PP +++ + N+ +L FNH
Sbjct: 584 KAEGIPPTNVTYSVIFKGLCRGWKLENCNQVLRERILEKFNH 625
Score = 131 bits (330), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 90/369 (24%), Positives = 170/369 (46%), Gaps = 19/369 (5%)
Query: 101 MLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSS 160
+L+ + G + A +V+ M KG +P V+++T L+ + G + + M S
Sbjct: 316 ILVKGFHLLGMISGAGEVIQDMLDKGLSPDVITYTILLCGQCQLGNIDMGLILLKDMLSR 375
Query: 161 G-PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGG 219
G S + Y ++L + + EA +F D E L PD + ++I+ K G
Sbjct: 376 GFELKSIIPYSVMLSGLCKTGRVDEALSLFY---DLEAYGLTPDLVAYSIVIHGLCKLGK 432
Query: 220 YEKARKLFALMAERGVQQSTVTYNSLM---SFETNYKEVSKIYDQMQRAGLQPDVVSYAL 276
++ A +++ M + + ++ T ++M + E + D + +G D++ Y +
Sbjct: 433 FDMAVRVYDEMCYKRILPNSRTLGAIMLGLCQKGMLLEARSLLDSLISSGDTLDIILYNI 492
Query: 277 LINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDR 336
+I+ Y K+ EEAL +F+ +++G+ P +N L+ + + + +AR + ++
Sbjct: 493 VIDGYAKSGCIEEALELFKVAIESGITPNVATFNSLIYGYCKTQNIAEARKILDVIKLYG 552
Query: 337 CSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYA---KVNN-- 391
P + SYTT++ AY N ++ E+ R +K +G P +TY + KG K+ N
Sbjct: 553 LVPSVVSYTTLMDAYANCGSIKSIEELRREMKAEGIPPTNVTYSVIFKGLCRGWKLENCN 612
Query: 392 -------LEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPP 444
LEK + M GI P+Q + TI+ + K A +K+M+S P
Sbjct: 613 QVLRERILEKFNHVLRDMESEGITPDQITYNTIIQYLCRVKHLSRAFELFKKMKSQNLDP 672
Query: 445 DQKAKNILL 453
NIL+
Sbjct: 673 TSATYNILI 681
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 81/394 (20%), Positives = 164/394 (41%), Gaps = 48/394 (12%)
Query: 97 MDFLMLITAYGKQGDFNKAEKVLSFMNKKGY-APSVVSHTALMEAYGRGGRYKNAEAIFR 155
+ + +L+ + G+ + +L M +G+ S++ ++ ++ + GR A ++F
Sbjct: 347 ITYTILLCGQCQLGNIDMGLILLKDMLSRGFELKSIIPYSVMLSGLCKTGRVDEALSLFY 406
Query: 156 RMQSSGPRPSALTYQIILKLFVEANKFKEAEEVF------------------------MT 191
+++ G P + Y I++ + KF A V+
Sbjct: 407 DLEAYGLTPDLVAYSIVIHGLCKLGKFDMAVRVYDEMCYKRILPNSRTLGAIMLGLCQKG 466
Query: 192 LLDEEKSPLKP--------DQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYN 243
+L E +S L D +++++I Y K+G E+A +LF + E G+ + T+N
Sbjct: 467 MLLEARSLLDSLISSGDTLDIILYNIVIDGYAKSGCIEEALELFKVAIESGITPNVATFN 526
Query: 244 SLM---SFETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDA 300
SL+ N E KI D ++ GL P VVSY L++AY + + EM
Sbjct: 527 SLIYGYCKTQNIAEARKILDVIKLYGLVPSVVSYTTLMDAYANCGSIKSIEELRREMKAE 586
Query: 301 GVRPTHKAYNILLDAFAISG------------MVDQARTVFKCMRRDRCSPDICSYTTML 348
G+ PT+ Y+++ ++++ V + M + +PD +Y T++
Sbjct: 587 GIPPTNVTYSVIFKGLCRGWKLENCNQVLRERILEKFNHVLRDMESEGITPDQITYNTII 646
Query: 349 SAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIK 408
+ A + F+++K P TY LI + K ++ +
Sbjct: 647 QYLCRVKHLSRAFELFKKMKSQNLDPTSATYNILIDSLCIYGCIRKADRFLYSLQKRNVS 706
Query: 409 PNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGF 442
++ +TT++ A+ D + AV+ + ++ GF
Sbjct: 707 LSKFAYTTVIKAHCVKGDPEMAVILFNQLLDRGF 740
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 73/368 (19%), Positives = 156/368 (42%), Gaps = 18/368 (4%)
Query: 101 MLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSS 160
++I K G F+ A +V M K P+ + A+M + G A ++ + SS
Sbjct: 422 IVIHGLCKLGKFDMAVRVYDEMCYKRILPNSRTLGAIMLGLCQKGMLLEARSLLDSLISS 481
Query: 161 GPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGY 220
G + Y I++ + ++ +EA E+F ++ S + P+ F+ +IY Y K
Sbjct: 482 GDTLDIILYNIVIDGYAKSGCIEEALELFKVAIE---SGITPNVATFNSLIYGYCKTQNI 538
Query: 221 EKARKLFALMAERGVQQSTVTYNSLMSFETN---YKEVSKIYDQMQRAGLQPDVVSYALL 277
+ARK+ ++ G+ S V+Y +LM N K + ++ +M+ G+ P V+Y+++
Sbjct: 539 AEARKILDVIKLYGLVPSVVSYTTLMDAYANCGSIKSIEELRREMKAEGIPPTNVTYSVI 598
Query: 278 INAYGKARREEEALAVFEE------------MLDAGVRPTHKAYNILLDAFAISGMVDQA 325
+ + E V E M G+ P YN ++ + +A
Sbjct: 599 FKGLCRGWKLENCNQVLRERILEKFNHVLRDMESEGITPDQITYNTIIQYLCRVKHLSRA 658
Query: 326 RTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKG 385
+FK M+ P +Y ++ + + A++F L++ + Y T+IK
Sbjct: 659 FELFKKMKSQNLDPTSATYNILIDSLCIYGCIRKADRFLYSLQKRNVSLSKFAYTTVIKA 718
Query: 386 YAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPD 445
+ + E + +++++ G + ++ +++ + + ++ M S G PD
Sbjct: 719 HCVKGDPEMAVILFNQLLDRGFNVSIRDYSAVINRLCRRHLAIESKYFFCLMLSRGISPD 778
Query: 446 QKAKNILL 453
+++
Sbjct: 779 LDICEVMI 786
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 55/292 (18%), Positives = 131/292 (44%), Gaps = 14/292 (4%)
Query: 161 GPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFH----------MM 210
G R S + ++ +F +FKE + + LL EE + F M+
Sbjct: 90 GFRHSRFSTLLVSHIFAGQRRFKELQVILEQLLQEEGKLCELLSNSFRKWESTGLVWDML 149
Query: 211 IYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSKIYDQMQRAGLQPD 270
+++ + +++ + M +R + ST +YNS++ N++E K++D + +
Sbjct: 150 LFLSSRLRMVDESLYILKKMKDRNLNVSTQSYNSVL---YNFRETDKMWDVYKEIK-DKN 205
Query: 271 VVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFK 330
+Y+ +++ + ++ E+A+ + P+ ++N ++ ++ G VD A++ F
Sbjct: 206 EHTYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSSYCKLGFVDMAKSFFC 265
Query: 331 CMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVN 390
+ + P + S+ +++ + A + + + G P+ +TY L+KG+ +
Sbjct: 266 TVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILVKGFHLLG 325
Query: 391 NLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGF 442
+ E+ M G+ P+ +T ++ + + D ++ K+M S GF
Sbjct: 326 MISGAGEVIQDMLDKGLSPDVITYTILLCGQCQLGNIDMGLILLKDMLSRGF 377
Score = 47.8 bits (112), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 56/241 (23%), Positives = 95/241 (39%), Gaps = 26/241 (10%)
Query: 252 YKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFE----------EMLDAG 301
+KE+ IY G + S L+ + + RR +E + E E+L
Sbjct: 82 FKELRDIY------GFRHSRFSTLLVSHIFAGQRRFKELQVILEQLLQEEGKLCELLSNS 135
Query: 302 VR---PTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDME 358
R T +++LL + MVD++ + K M+ + SY ++L N + +
Sbjct: 136 FRKWESTGLVWDMLLFLSSRLRMVDESLYILKKMKDRNLNVSTQSYNSVL---YNFRETD 192
Query: 359 GAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIM 418
++ +K N TY T++ G + LE + I P+ F +IM
Sbjct: 193 KMWDVYKEIKD----KNEHTYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIM 248
Query: 419 DAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNE 478
+Y K D A ++ + CG P + NIL++ EA EL + N E
Sbjct: 249 SSYCKLGFVDMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVE 308
Query: 479 P 479
P
Sbjct: 309 P 309
>gi|167998294|ref|XP_001751853.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162696951|gb|EDQ83288.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 657
Score = 145 bits (366), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 110/450 (24%), Positives = 190/450 (42%), Gaps = 43/450 (9%)
Query: 69 RLKQLKKWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYA 128
+L Q++ W+ S V R S + N LI G +A K+ +M K+G
Sbjct: 182 QLGQMRNWDAASRVFRAFRSASV-EPNAHVCTTLIAVLGYGRRLPEALKLFRWMEKQGIE 240
Query: 129 PSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEV 188
+ + ALM A GR G A +F M+ G P +T++ ++ A K+K A+
Sbjct: 241 RPIYTFNALMVACGRCGAGDTAVELFEEMKELGLAPDNITFRGLVSATTAAGKWKAAQS- 299
Query: 189 FMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLM-S 247
F+ L+ + F M + +A ++ L M E+G + YN+L+ +
Sbjct: 300 FINLMQAGGFSFAIGE--FTEMQWACARARNSRESLGLLQAMIEQGCEPRLENYNALLCA 357
Query: 248 FE--TNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPT 305
+E N++E + +Q G PD ++++ L+ A A + E+A+AV E+M + P
Sbjct: 358 YEKTANWEEAVRTVVWIQEKGFTPDFITWSSLLGACANAGQAEKAVAVMEKMKENNFTPN 417
Query: 306 HKAYNILLDAFAISGMVDQARTVFKCMRRDRCSP-------------------------- 339
++ LL A+ +G ++ +F M C P
Sbjct: 418 VVSWCYLLKAYQKTGNWEKTEEIFHSMLNSGCPPNEVAWNSLLSAYEKGRQWKRVLYTIE 477
Query: 340 ---------DICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVN 390
D+ +++T +SA A + AEK R++KQ G PN++TY +LIK Y V
Sbjct: 478 KQEELGVKLDVVAWSTTISALAKAGQWQLAEKKIRQMKQSGCQPNIVTYSSLIKAYGDVG 537
Query: 391 NLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKE-MESCGFPPDQKAK 449
K ++ M + GI+P+ ++ AY K + D + ++ M G PD+ A
Sbjct: 538 LWNKAESVFKSMLLEGIRPDSKACCALLRAYAKGRQLDKVMFFFDSMMPRYGIKPDKYAY 597
Query: 450 NILLSLAKTADERNEANELLGNFNHPNNEP 479
+ T E A + + N P
Sbjct: 598 AAIFWACWTCGEWQRAADYMENMEAAGCTP 627
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 79/305 (25%), Positives = 156/305 (51%), Gaps = 7/305 (2%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
L+ AY K ++ +A + + ++ +KG+ P ++ ++L+ A G+ + A A+ +M+ +
Sbjct: 354 LLCAYEKTANWEEAVRTVVWIQEKGFTPDFITWSSLLGACANAGQAEKAVAVMEKMKENN 413
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
P+ +++ +LK + + +++ EE+F ++L+ S P++ ++ ++ Y+K ++
Sbjct: 414 FTPNVVSWCYLLKAYQKTGNWEKTEEIFHSMLN---SGCPPNEVAWNSLLSAYEKGRQWK 470
Query: 222 KARKLFALMAERGVQQSTVTYNSLMSF---ETNYKEVSKIYDQMQRAGLQPDVVSYALLI 278
+ E GV+ V +++ +S ++ K QM+++G QP++V+Y+ LI
Sbjct: 471 RVLYTIEKQEELGVKLDVVAWSTTISALAKAGQWQLAEKKIRQMKQSGCQPNIVTYSSLI 530
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVF-KCMRRDRC 337
AYG +A +VF+ ML G+RP KA LL A+A +D+ F M R
Sbjct: 531 KAYGDVGLWNKAESVFKSMLLEGIRPDSKACCALLRAYAKGRQLDKVMFFFDSMMPRYGI 590
Query: 338 SPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMME 397
PD +Y + A + + A + ++ G P+ + Y TLI Y ++K ME
Sbjct: 591 KPDKYAYAAIFWACWTCGEWQRAADYMENMEAAGCTPDTMIYTTLITMYEAHGQVDKAME 650
Query: 398 IYDKM 402
I KM
Sbjct: 651 ILKKM 655
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 85/374 (22%), Positives = 167/374 (44%), Gaps = 6/374 (1%)
Query: 111 DFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQ 170
D E ++ +++ G V S ++ G+ + A +FR +S+ P+A
Sbjct: 153 DLGSDEDIMGVVHETGLRVDVRSMNVVVWQLGQMRNWDAASRVFRAFRSASVEPNAHVCT 212
Query: 171 IILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALM 230
++ + + EA ++F + EK ++ F+ ++ + G + A +LF M
Sbjct: 213 TLIAVLGYGRRLPEALKLFRWM---EKQGIERPIYTFNALMVACGRCGAGDTAVELFEEM 269
Query: 231 AERGVQQSTVTYNSLMSFET---NYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARRE 287
E G+ +T+ L+S T +K + MQ G + + + A +AR
Sbjct: 270 KELGLAPDNITFRGLVSATTAAGKWKAAQSFINLMQAGGFSFAIGEFTEMQWACARARNS 329
Query: 288 EEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTM 347
E+L + + M++ G P + YN LL A+ + ++A ++ +PD +++++
Sbjct: 330 RESLGLLQAMIEQGCEPRLENYNALLCAYEKTANWEEAVRTVVWIQEKGFTPDFITWSSL 389
Query: 348 LSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGI 407
L A NA E A ++K++ F PNV+++ L+K Y K N EK EI+ M +G
Sbjct: 390 LGACANAGQAEKAVAVMEKMKENNFTPNVVSWCYLLKAYQKTGNWEKTEEIFHSMLNSGC 449
Query: 408 KPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANE 467
PN+ + +++ AY K + + + ++ E G D A + +S A + A +
Sbjct: 450 PPNEVAWNSLLSAYEKGRQWKRVLYTIEKQEELGVKLDVVAWSTTISALAKAGQWQLAEK 509
Query: 468 LLGNFNHPNNEPGI 481
+ +P I
Sbjct: 510 KIRQMKQSGCQPNI 523
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 70/277 (25%), Positives = 116/277 (41%), Gaps = 45/277 (16%)
Query: 98 DFLMLITAYGKQGDFNKAEKVLSFMNK---KGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
DF+ + G + +AEK ++ M K + P+VVS L++AY + G ++ E IF
Sbjct: 382 DFITWSSLLGACANAGQAEKAVAVMEKMKENNFTPNVVSWCYLLKAYQKTGNWEKTEEIF 441
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
M +SG P+ + + +L + + ++K V T+ +E+ +K D + I
Sbjct: 442 HSMLNSGCPPNEVAWNSLLSAYEKGRQWKR---VLYTIEKQEELGVKLDVVAWSTTISAL 498
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSLMSF----------ETNYK----------- 253
KAG ++ A K M + G Q + VTY+SL+ E+ +K
Sbjct: 499 AKAGQWQLAEKKIRQMKQSGCQPNIVTYSSLIKAYGDVGLWNKAESVFKSMLLEGIRPDS 558
Query: 254 -----------------EVSKIYDQMQ-RAGLQPDVVSYALLINAYGKARREEEALAVFE 295
+V +D M R G++PD +YA + A + A E
Sbjct: 559 KACCALLRAYAKGRQLDKVMFFFDSMMPRYGIKPDKYAYAAIFWACWTCGEWQRAADYME 618
Query: 296 EMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCM 332
M AG P Y L+ + G VD+A + K M
Sbjct: 619 NMEAAGCTPDTMIYTTLITMYEAHGQVDKAMEILKKM 655
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 91/213 (42%), Gaps = 22/213 (10%)
Query: 22 AADEAGKKNWRRLMNQIE---EVGSAVAVLRSERTRGQPLPKDLVLGTLVRLKQLKKWNV 78
+A E G++ W+R++ IE E+G + V+ T + L + +W +
Sbjct: 461 SAYEKGRQ-WKRVLYTIEKQEELGVKLDVVAWSTT-------------ISALAKAGQWQL 506
Query: 79 VSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALM 138
+ + ++ QS N + + LI AYG G +NKAE V M +G P + AL+
Sbjct: 507 AEKKIRQMK-QSGCQPNIVTYSSLIKAYGDVGLWNKAESVFKSMLLEGIRPDSKACCALL 565
Query: 139 EAYGRGGRYKNAEAIFRRMQSS-GPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEK 197
AY +G + F M G +P Y I +++ A + + E
Sbjct: 566 RAYAKGRQLDKVMFFFDSMMPRYGIKPDKYAYAAIFWACWTCGEWQRAADYMENM---EA 622
Query: 198 SPLKPDQKMFHMMIYMYKKAGGYEKARKLFALM 230
+ PD ++ +I MY+ G +KA ++ M
Sbjct: 623 AGCTPDTMIYTTLITMYEAHGQVDKAMEILKKM 655
>gi|225430498|ref|XP_002283327.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
chloroplastic [Vitis vinifera]
gi|296082142|emb|CBI21147.3| unnamed protein product [Vitis vinifera]
Length = 1113
Score = 145 bits (366), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 97/390 (24%), Positives = 184/390 (47%), Gaps = 6/390 (1%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N F + I G+ G ++A +L M+ G P VV++T L++A G+ NA+ +F
Sbjct: 261 NIYTFTICIRILGRAGKIDEAYGILKRMDDAGCGPDVVTYTVLIDALCNAGKLNNAKELF 320
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
+M++S +P +TY +L F + +E + + E PD F ++I
Sbjct: 321 LKMKASSHKPDRVTYITLLDKFSDHGDLDAIKEFWSEM---EADGYLPDVVTFTILIDAL 377
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSLMS--FETN-YKEVSKIYDQMQRAGLQPDV 271
K G ++A +M ++GV + TYN+L+ N E ++++ M+ GL+
Sbjct: 378 CKVGKVDEAFGTLDVMKKQGVAPNLHTYNTLICGLLRLNRLDEALELFNSMESLGLETTA 437
Query: 272 VSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKC 331
+Y L I+ YGK+ +A+ FE+M G+ P A N L + A G +++A+ F
Sbjct: 438 YTYILFIDYYGKSGESGKAIKTFEKMKTNGIVPNIVACNASLYSLAEQGRLEEAKEFFNG 497
Query: 332 MRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNN 391
+++ +PD +Y ++ Y A ++ A K ++++G P V+ +LI K +
Sbjct: 498 LKKCGLAPDAITYNILMRCYGKAGRVDDAIKLLSEMEENGCDPEVVIINSLIDTLYKADR 557
Query: 392 LEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNI 451
+++ +++ +M+ + P + T++ GK A +K M + PP+ + N
Sbjct: 558 VDEAWKMFQRMKEMKLAPTVVTYNTLLAGLGKEGRVQEATALFKGMIADDCPPNTISFNT 617
Query: 452 LLSLAKTADERNEANELLGNFNHPNNEPGI 481
LL E + A ++L N P +
Sbjct: 618 LLDCLCKNGEVDLALKMLFRMTEMNCFPDV 647
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 99/375 (26%), Positives = 171/375 (45%), Gaps = 6/375 (1%)
Query: 94 FNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAI 153
N ++ LI K G +A KV M +G PS+ +++ALM A G+ + +
Sbjct: 190 LNGYSYIGLIHLLLKSGFCREALKVYRRMVSEGIKPSLKTYSALMVALGKRRDIETVMGL 249
Query: 154 FRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYM 213
+ M+S G RP+ T+ I +++ A K EA + + D + PD + ++I
Sbjct: 250 LQEMESLGLRPNIYTFTICIRILGRAGKIDEAYGILKRMDD---AGCGPDVVTYTVLIDA 306
Query: 214 YKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSKI---YDQMQRAGLQPD 270
AG A++LF M + VTY +L+ +++ ++ I + +M+ G PD
Sbjct: 307 LCNAGKLNNAKELFLKMKASSHKPDRVTYITLLDKFSDHGDLDAIKEFWSEMEADGYLPD 366
Query: 271 VVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFK 330
VV++ +LI+A K + +EA + M GV P YN L+ +D+A +F
Sbjct: 367 VVTFTILIDALCKVGKVDEAFGTLDVMKKQGVAPNLHTYNTLICGLLRLNRLDEALELFN 426
Query: 331 CMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVN 390
M +Y + Y + + A K F ++K +G VPN++ + A+
Sbjct: 427 SMESLGLETTAYTYILFIDYYGKSGESGKAIKTFEKMKTNGIVPNIVACNASLYSLAEQG 486
Query: 391 NLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKN 450
LE+ E ++ ++ G+ P+ + +M YGK D A+ EME G P+ N
Sbjct: 487 RLEEAKEFFNGLKKCGLAPDAITYNILMRCYGKAGRVDDAIKLLSEMEENGCDPEVVIIN 546
Query: 451 ILLSLAKTADERNEA 465
L+ AD +EA
Sbjct: 547 SLIDTLYKADRVDEA 561
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 78/299 (26%), Positives = 154/299 (51%), Gaps = 6/299 (2%)
Query: 122 MNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANK 181
M G P V ++ ++A G+ G+ K ++ M G +P+ +T+ I++ V++N
Sbjct: 814 MKNAGCTPDVFTYNLFLDALGKSGKIKELFDLYEEMLFRGCKPNTITHNIVIFGLVKSNS 873
Query: 182 FKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVT 241
+A +++ L+ + SP + +I K G E+A++ F M + G +
Sbjct: 874 LDKAIDLYYDLMSGDFSP---TPWTYGPLIDGLLKLGRLEEAKQFFEEMLDYGCMPNCPL 930
Query: 242 YNSLMSF---ETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEML 298
YN LM+ + + + +++ +M + G++PD+ SY+++++ + ++AL FEE+
Sbjct: 931 YNILMNGFGKQGDVETACELFRRMVKEGIRPDLKSYSIMVDCLCMVGKVDDALHYFEELK 990
Query: 299 DAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDME 358
+G+ P YN++++ S V++A ++F MR +PD+ +Y ++ A +E
Sbjct: 991 LSGLDPDLVCYNLMINGLGRSQRVEEALSLFDEMRNRGITPDLYTYNALILNLGIAGMVE 1050
Query: 359 GAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTI 417
A K + L+ G PNV TY LI+G++ N ++ +Y KM V G +PN F +
Sbjct: 1051 EAGKMYEELQLKGLEPNVFTYNALIRGHSMSGNPDRAYAVYKKMMVGGCRPNTGTFAQL 1109
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 87/352 (24%), Positives = 167/352 (47%), Gaps = 6/352 (1%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
+ + ++ L+ + GD + ++ S M GY P VV+ T L++A + G+ A
Sbjct: 331 DRVTYITLLDKFSDHGDLDAIKEFWSEMEADGYLPDVVTFTILIDALCKVGKVDEAFGTL 390
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
M+ G P+ TY ++ + N+ EA E+F ++ E L+ + + I Y
Sbjct: 391 DVMKKQGVAPNLHTYNTLICGLLRLNRLDEALELFNSM---ESLGLETTAYTYILFIDYY 447
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYN-SLMSF--ETNYKEVSKIYDQMQRAGLQPDV 271
K+G KA K F M G+ + V N SL S + +E + ++ +++ GL PD
Sbjct: 448 GKSGESGKAIKTFEKMKTNGIVPNIVACNASLYSLAEQGRLEEAKEFFNGLKKCGLAPDA 507
Query: 272 VSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKC 331
++Y +L+ YGKA R ++A+ + EM + G P N L+D + VD+A +F+
Sbjct: 508 ITYNILMRCYGKAGRVDDAIKLLSEMEENGCDPEVVIINSLIDTLYKADRVDEAWKMFQR 567
Query: 332 MRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNN 391
M+ + +P + +Y T+L+ ++ A F+ + D PN I++ TL+ K
Sbjct: 568 MKEMKLAPTVVTYNTLLAGLGKEGRVQEATALFKGMIADDCPPNTISFNTLLDCLCKNGE 627
Query: 392 LEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFP 443
++ +++ +M P+ + T++ K + A + +M+ +P
Sbjct: 628 VDLALKMLFRMTEMNCFPDVLTYNTVIYGLIKENRVNYAFWLFHQMKKVIYP 679
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 96/404 (23%), Positives = 178/404 (44%), Gaps = 6/404 (1%)
Query: 99 FLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQ 158
+L + +G +A L M K G+ + S+ L+ + G + A ++RRM
Sbjct: 160 YLTIFKVLYIRGGLREAPVALEKMRKVGFVLNGYSYIGLIHLLLKSGFCREALKVYRRMV 219
Query: 159 SSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAG 218
S G +PS TY L V K ++ E V L + E L+P+ F + I + +AG
Sbjct: 220 SEGIKPSLKTYS---ALMVALGKRRDIETVMGLLQEMESLGLRPNIYTFTICIRILGRAG 276
Query: 219 GYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVS---KIYDQMQRAGLQPDVVSYA 275
++A + M + G VTY L+ N +++ +++ +M+ + +PD V+Y
Sbjct: 277 KIDEAYGILKRMDDAGCGPDVVTYTVLIDALCNAGKLNNAKELFLKMKASSHKPDRVTYI 336
Query: 276 LLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRD 335
L++ + + + EM G P + IL+DA G VD+A M++
Sbjct: 337 TLLDKFSDHGDLDAIKEFWSEMEADGYLPDVVTFTILIDALCKVGKVDEAFGTLDVMKKQ 396
Query: 336 RCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKM 395
+P++ +Y T++ + + ++ A + F ++ G TY I Y K K
Sbjct: 397 GVAPNLHTYNTLICGLLRLNRLDEALELFNSMESLGLETTAYTYILFIDYYGKSGESGKA 456
Query: 396 MEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSL 455
++ ++KM+ NGI PN + + + + A ++ ++ CG PD NIL+
Sbjct: 457 IKTFEKMKTNGIVPNIVACNASLYSLAEQGRLEEAKEFFNGLKKCGLAPDAITYNILMRC 516
Query: 456 AKTADERNEANELLGNFNHPNNEPGINGLSISVDEEDDDDDDDE 499
A ++A +LL +P + ++ +D D DE
Sbjct: 517 YGKAGRVDDAIKLLSEMEENGCDPEVVIINSLIDTLYKADRVDE 560
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 82/333 (24%), Positives = 158/333 (47%), Gaps = 10/333 (3%)
Query: 117 KVLSFMNKKGYAPSVVSHTA----LMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQII 172
+ SF N P V+ T ++E R ++ +F MQ + S TY I
Sbjct: 104 QAFSFFNSVAEMPRVIHTTETCNYVLEMLRAHRRVEDMVVVFNLMQKQIIKRSINTYLTI 163
Query: 173 LKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAE 232
K+ +EA + L K + + +I++ K+G +A K++ M
Sbjct: 164 FKVLYIRGGLREAP---VALEKMRKVGFVLNGYSYIGLIHLLLKSGFCREALKVYRRMVS 220
Query: 233 RGVQQSTVTYNSLMSFETNYKEVSKI---YDQMQRAGLQPDVVSYALLINAYGKARREEE 289
G++ S TY++LM +++ + +M+ GL+P++ ++ + I G+A + +E
Sbjct: 221 EGIKPSLKTYSALMVALGKRRDIETVMGLLQEMESLGLRPNIYTFTICIRILGRAGKIDE 280
Query: 290 ALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLS 349
A + + M DAG P Y +L+DA +G ++ A+ +F M+ PD +Y T+L
Sbjct: 281 AYGILKRMDDAGCGPDVVTYTVLIDALCNAGKLNNAKELFLKMKASSHKPDRVTYITLLD 340
Query: 350 AYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKP 409
+ + D++ ++F+ ++ DG++P+V+T+ LI KV +++ D M+ G+ P
Sbjct: 341 KFSDHGDLDAIKEFWSEMEADGYLPDVVTFTILIDALCKVGKVDEAFGTLDVMKKQGVAP 400
Query: 410 NQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGF 442
N + T++ + D A+ + MES G
Sbjct: 401 NLHTYNTLICGLLRLNRLDEALELFNSMESLGL 433
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 75/321 (23%), Positives = 154/321 (47%), Gaps = 6/321 (1%)
Query: 128 APSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEE 187
PS+ ++ +L++ + + A +F +M+++G P TY + L ++ K KE +
Sbjct: 785 TPSLEAYNSLIDGLLKARLTEMAWGLFYKMKNAGCTPDVFTYNLFLDALGKSGKIKELFD 844
Query: 188 VFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMS 247
++ +L KP+ +++I+ K+ +KA L+ + + TY L+
Sbjct: 845 LYEEMLFRG---CKPNTITHNIVIFGLVKSNSLDKAIDLYYDLMSGDFSPTPWTYGPLID 901
Query: 248 FETNY---KEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRP 304
+E + +++M G P+ Y +L+N +GK E A +F M+ G+RP
Sbjct: 902 GLLKLGRLEEAKQFFEEMLDYGCMPNCPLYNILMNGFGKQGDVETACELFRRMVKEGIRP 961
Query: 305 THKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFF 364
K+Y+I++D + G VD A F+ ++ PD+ Y M++ + +E A F
Sbjct: 962 DLKSYSIMVDCLCMVGKVDDALHYFEELKLSGLDPDLVCYNLMINGLGRSQRVEEALSLF 1021
Query: 365 RRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKN 424
++ G P++ TY LI +E+ ++Y+++++ G++PN + ++ + +
Sbjct: 1022 DEMRNRGITPDLYTYNALILNLGIAGMVEEAGKMYEELQLKGLEPNVFTYNALIRGHSMS 1081
Query: 425 KDFDSAVVWYKEMESCGFPPD 445
+ D A YK+M G P+
Sbjct: 1082 GNPDRAYAVYKKMMVGGCRPN 1102
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 85/412 (20%), Positives = 177/412 (42%), Gaps = 38/412 (9%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + F L+ K G+ + A K+L M + P V+++ ++ + R A +F
Sbjct: 611 NTISFNTLLDCLCKNGEVDLALKMLFRMTEMNCFPDVLTYNTVIYGLIKENRVNYAFWLF 670
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEA----------------------------- 185
+M+ P +T +L ++ + ++A
Sbjct: 671 HQMKKV-IYPDYVTLCTLLPGVIKDGRIEDAFRVAKEFVHHVGDHADGSFWEDLMGGILI 729
Query: 186 -EEVFMTLLDEEK----SPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTV 240
E+ ++L E + + D + ++ ++ K + L + S
Sbjct: 730 EAEIGQSILFAESLVCNTICEDDSVLIPLVKFLCKHGKAVDAYNVFLKLTKSFCITPSLE 789
Query: 241 TYNSLMS--FETNYKEVS-KIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEM 297
YNSL+ + E++ ++ +M+ AG PDV +Y L ++A GK+ + +E ++EEM
Sbjct: 790 AYNSLIDGLLKARLTEMAWGLFYKMKNAGCTPDVFTYNLFLDALGKSGKIKELFDLYEEM 849
Query: 298 LDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDM 357
L G +P +NI++ S +D+A ++ + SP +Y ++ + +
Sbjct: 850 LFRGCKPNTITHNIVIFGLVKSNSLDKAIDLYYDLMSGDFSPTPWTYGPLIDGLLKLGRL 909
Query: 358 EGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTI 417
E A++FF + G +PN Y L+ G+ K ++E E++ +M GI+P+ ++ +
Sbjct: 910 EEAKQFFEEMLDYGCMPNCPLYNILMNGFGKQGDVETACELFRRMVKEGIRPDLKSYSIM 969
Query: 418 MDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELL 469
+D D A+ +++E++ G PD N++++ + EA L
Sbjct: 970 VDCLCMVGKVDDALHYFEELKLSGLDPDLVCYNLMINGLGRSQRVEEALSLF 1021
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 66/313 (21%), Positives = 146/313 (46%), Gaps = 5/313 (1%)
Query: 172 ILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMA 231
++K + K +A VF+ L + + P + ++ +I KA E A LF M
Sbjct: 758 LVKFLCKHGKAVDAYNVFLKL--TKSFCITPSLEAYNSLIDGLLKARLTEMAWGLFYKMK 815
Query: 232 ERGVQQSTVTYNSLMSF---ETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREE 288
G TYN + KE+ +Y++M G +P+ +++ ++I K+ +
Sbjct: 816 NAGCTPDVFTYNLFLDALGKSGKIKELFDLYEEMLFRGCKPNTITHNIVIFGLVKSNSLD 875
Query: 289 EALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTML 348
+A+ ++ +++ PT Y L+D G +++A+ F+ M C P+ Y ++
Sbjct: 876 KAIDLYYDLMSGDFSPTPWTYGPLIDGLLKLGRLEEAKQFFEEMLDYGCMPNCPLYNILM 935
Query: 349 SAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIK 408
+ + D+E A + FRR+ ++G P++ +Y ++ V ++ + +++++++G+
Sbjct: 936 NGFGKQGDVETACELFRRMVKEGIRPDLKSYSIMVDCLCMVGKVDDALHYFEELKLSGLD 995
Query: 409 PNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANEL 468
P+ + +++ G+++ + A+ + EM + G PD N L+ A EA ++
Sbjct: 996 PDLVCYNLMINGLGRSQRVEEALSLFDEMRNRGITPDLYTYNALILNLGIAGMVEEAGKM 1055
Query: 469 LGNFNHPNNEPGI 481
EP +
Sbjct: 1056 YEELQLKGLEPNV 1068
Score = 95.1 bits (235), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 65/232 (28%), Positives = 106/232 (45%), Gaps = 13/232 (5%)
Query: 88 IQSWWDFNEMDFLMLITAYG-------KQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEA 140
I ++D DF YG K G +A++ M G P+ + LM
Sbjct: 878 IDLYYDLMSGDFSPTPWTYGPLIDGLLKLGRLEEAKQFFEEMLDYGCMPNCPLYNILMNG 937
Query: 141 YGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPL 200
+G+ G + A +FRRM G RP +Y I++ K +A F L + S L
Sbjct: 938 FGKQGDVETACELFRRMVKEGIRPDLKSYSIMVDCLCMVGKVDDALHYFEEL---KLSGL 994
Query: 201 KPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSL---MSFETNYKEVSK 257
PD +++MI ++ E+A LF M RG+ TYN+L + +E K
Sbjct: 995 DPDLVCYNLMINGLGRSQRVEEALSLFDEMRNRGITPDLYTYNALILNLGIAGMVEEAGK 1054
Query: 258 IYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAY 309
+Y+++Q GL+P+V +Y LI + + + A AV+++M+ G RP +
Sbjct: 1055 MYEELQLKGLEPNVFTYNALIRGHSMSGNPDRAYAVYKKMMVGGCRPNTGTF 1106
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 83/393 (21%), Positives = 154/393 (39%), Gaps = 9/393 (2%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
L+ GK+G +A + M P+ +S L++ + G A + RM
Sbjct: 583 LLAGLGKEGRVQEATALFKGMIADDCPPNTISFNTLLDCLCKNGEVDLALKMLFRMTEMN 642
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
P LTY ++ ++ N+ A +F + K + PD ++ K G E
Sbjct: 643 CFPDVLTYNTVIYGLIKENRVNYAFWLF----HQMKKVIYPDYVTLCTLLPGVIKDGRIE 698
Query: 222 KARKLFA-LMAERGVQQSTVTYNSLMS---FETNYKEVSKIYDQMQRAGLQPDVVSYALL 277
A ++ + G + LM E + + + + D L
Sbjct: 699 DAFRVAKEFVHHVGDHADGSFWEDLMGGILIEAEIGQSILFAESLVCNTICEDDSVLIPL 758
Query: 278 INAYGKARREEEALAVFEEMLDA-GVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDR 336
+ K + +A VF ++ + + P+ +AYN L+D + + + A +F M+
Sbjct: 759 VKFLCKHGKAVDAYNVFLKLTKSFCITPSLEAYNSLIDGLLKARLTEMAWGLFYKMKNAG 818
Query: 337 CSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMM 396
C+PD+ +Y L A + ++ + + G PN IT+ +I G K N+L+K +
Sbjct: 819 CTPDVFTYNLFLDALGKSGKIKELFDLYEEMLFRGCKPNTITHNIVIFGLVKSNSLDKAI 878
Query: 397 EIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLA 456
++Y + P + ++D K + A +++EM G P+ NIL++
Sbjct: 879 DLYYDLMSGDFSPTPWTYGPLIDGLLKLGRLEEAKQFFEEMLDYGCMPNCPLYNILMNGF 938
Query: 457 KTADERNEANELLGNFNHPNNEPGINGLSISVD 489
+ A EL P + SI VD
Sbjct: 939 GKQGDVETACELFRRMVKEGIRPDLKSYSIMVD 971
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 93/183 (50%), Gaps = 8/183 (4%)
Query: 101 MLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSS 160
+L+ +GKQGD A ++ M K+G P + S++ +++ G+ +A F ++ S
Sbjct: 933 ILMNGFGKQGDVETACELFRRMVKEGIRPDLKSYSIMVDCLCMVGKVDDALHYFEELKLS 992
Query: 161 GPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKS-PLKPDQKMFHMMIYMYKKAGG 219
G P + Y +++ + + +EA ++L DE ++ + PD ++ +I AG
Sbjct: 993 GLDPDLVCYNLMINGLGRSQRVEEA----LSLFDEMRNRGITPDLYTYNALILNLGIAGM 1048
Query: 220 YEKARKLFALMAERGVQQSTVTYNSLM---SFETNYKEVSKIYDQMQRAGLQPDVVSYAL 276
E+A K++ + +G++ + TYN+L+ S N +Y +M G +P+ ++A
Sbjct: 1049 VEEAGKMYEELQLKGLEPNVFTYNALIRGHSMSGNPDRAYAVYKKMMVGGCRPNTGTFAQ 1108
Query: 277 LIN 279
L N
Sbjct: 1109 LPN 1111
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/188 (23%), Positives = 83/188 (44%)
Query: 302 VRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAE 361
V T + N +L+ V+ VF M++ I +Y T+ + A
Sbjct: 118 VIHTTETCNYVLEMLRAHRRVEDMVVVFNLMQKQIIKRSINTYLTIFKVLYIRGGLREAP 177
Query: 362 KFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAY 421
++++ GFV N +Y LI K + +++Y +M GIKP+ ++ +M A
Sbjct: 178 VALEKMRKVGFVLNGYSYIGLIHLLLKSGFCREALKVYRRMVSEGIKPSLKTYSALMVAL 237
Query: 422 GKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGI 481
GK +D ++ + +EMES G P+ I + + A + +EA +L + P +
Sbjct: 238 GKRRDIETVMGLLQEMESLGLRPNIYTFTICIRILGRAGKIDEAYGILKRMDDAGCGPDV 297
Query: 482 NGLSISVD 489
++ +D
Sbjct: 298 VTYTVLID 305
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 60/305 (19%), Positives = 116/305 (38%), Gaps = 40/305 (13%)
Query: 201 KPDQKMFHMMIY-MYKKAGGYEKARKLFALMAERG-VQQSTVTYNSLMSFETNYKEVSK- 257
KP+ M +Y + K +A F +AE V +T T N ++ ++ V
Sbjct: 82 KPESTMSSEEVYRVLKSISDPNQAFSFFNSVAEMPRVIHTTETCNYVLEMLRAHRRVEDM 141
Query: 258 --IYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDA 315
+++ MQ+ ++ + +Y + EA E+M G +Y L+
Sbjct: 142 VVVFNLMQKQIIKRSINTYLTIFKVLYIRGGLREAPVALEKMRKVGFVLNGYSYIGLIHL 201
Query: 316 FAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPN 375
SG +A V++ M + P + +Y+ ++ A D+E + ++ G PN
Sbjct: 202 LLKSGFCREALKVYRRMVSEGIKPSLKTYSALMVALGKRRDIETVMGLLQEMESLGLRPN 261
Query: 376 VITY-----------------------------------GTLIKGYAKVNNLEKMMEIYD 400
+ T+ LI L E++
Sbjct: 262 IYTFTICIRILGRAGKIDEAYGILKRMDDAGCGPDVVTYTVLIDALCNAGKLNNAKELFL 321
Query: 401 KMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTAD 460
KM+ + KP++ + T++D + + D D+ ++ EME+ G+ PD IL+
Sbjct: 322 KMKASSHKPDRVTYITLLDKFSDHGDLDAIKEFWSEMEADGYLPDVVTFTILIDALCKVG 381
Query: 461 ERNEA 465
+ +EA
Sbjct: 382 KVDEA 386
>gi|302781562|ref|XP_002972555.1| hypothetical protein SELMODRAFT_97527 [Selaginella moellendorffii]
gi|300160022|gb|EFJ26641.1| hypothetical protein SELMODRAFT_97527 [Selaginella moellendorffii]
Length = 564
Score = 145 bits (366), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 98/380 (25%), Positives = 168/380 (44%), Gaps = 13/380 (3%)
Query: 70 LKQLKKWNVVSEVLEWLRIQSWWDFN------EMDFLMLITAYGKQGDFNKAEKVLSFMN 123
L L K ++ +E E +R S D + + F LI K G ++A V M
Sbjct: 151 LDGLCKQSMTAEACELMR--SLRDGSLRVSPDTVTFSTLIDGLCKCGQIDEACSVFDDMI 208
Query: 124 KKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFK 183
GY P+V+++ AL+ + + + A A+ M G P +TY +++ F +A++
Sbjct: 209 AGGYVPNVITYNALVNGLCKADKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASRVD 268
Query: 184 EAEEVFMTLLDEEKSP--LKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVT 241
EA E+ + +P L PD+ F+++I KAG +E+A LF M + +Q +T
Sbjct: 269 EALELLHGMASRGCTPNVLVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNLQPDVMT 328
Query: 242 YNSLMSFETNYKEVSK---IYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEML 298
+ +L+ +V I D M G+ P+VV+Y L++ K+ R EEA EEM+
Sbjct: 329 FGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNALVHGLCKSGRIEEACQFLEEMV 388
Query: 299 DAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDME 358
+G P Y L+ A + D A + ++ PD +Y ++ + E
Sbjct: 389 SSGCVPDSITYGSLVYALCRASRTDDALQLVSELKSFGWDPDTVTYNILVDGLWKSGKTE 448
Query: 359 GAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIM 418
A + G P+ T+ G + NL ME+ + G+ P+ T ++I+
Sbjct: 449 QAITVLEEMVGKGHQPDSFTFAACFSGLHRSGNLAGTMELLRVVLAKGMLPDATTCSSIL 508
Query: 419 DAYGKNKDFDSAVVWYKEME 438
D ++ D KE E
Sbjct: 509 DWVCRSGKLDDVKAMIKEFE 528
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 94/398 (23%), Positives = 180/398 (45%), Gaps = 11/398 (2%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
+I K D ++ + ++G+ P VV++ L+++ + G + A + M S G
Sbjct: 43 IINGLCKSNDLGAGMELFEELVERGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRG 102
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
P+ +TY +++ + + EA E+ + + L P+ ++ + K
Sbjct: 103 CVPNVVTYSVLINGLCKVGRIDEARELIQEMTRKSCDVL-PNIITYNSFLDGLCKQSMTA 161
Query: 222 KARKLFALMAERGVQQS--TVTYNSLMSFETNYKEV---SKIYDQMQRAGLQPDVVSYAL 276
+A +L + + ++ S TVT+++L+ ++ ++D M G P+V++Y
Sbjct: 162 EACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNA 221
Query: 277 LINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDR 336
L+N KA + E A A+ E M+D GV P Y++L+DAF + VD+A + M
Sbjct: 222 LVNGLCKADKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRG 281
Query: 337 CSPDI-----CSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNN 391
C+P++ ++ +++ A + E A F + P+V+T+G LI G K
Sbjct: 282 CTPNVLVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQ 341
Query: 392 LEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNI 451
+E +I D M G+ PN + ++ K+ + A + +EM S G PD
Sbjct: 342 VEAARDILDLMGNLGVPPNVVTYNALVHGLCKSGRIEEACQFLEEMVSSGCVPDSITYGS 401
Query: 452 LLSLAKTADERNEANELLGNFNHPNNEPGINGLSISVD 489
L+ A ++A +L+ +P +I VD
Sbjct: 402 LVYALCRASRTDDALQLVSELKSFGWDPDTVTYNILVD 439
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 86/325 (26%), Positives = 146/325 (44%), Gaps = 14/325 (4%)
Query: 169 YQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFA 228
Y I+L+ A A E+F + + + P ++ +I K+ +LF
Sbjct: 4 YNIVLQSLCRAGDTARALEIFRG--EMARDGVAPTIVTYNTIINGLCKSNDLGAGMELFE 61
Query: 229 LMAERGVQQSTVTYNSL---MSFETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKAR 285
+ ERG VTYN+L + + +E +++ M G P+VV+Y++LIN K
Sbjct: 62 ELVERGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRGCVPNVVTYSVLINGLCKVG 121
Query: 286 REEEALAVFEEML--DAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRD--RCSPDI 341
R +EA + +EM V P YN LD M +A + + +R R SPD
Sbjct: 122 RIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPDT 181
Query: 342 CSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDK 401
+++T++ ++ A F + G+VPNVITY L+ G K + +E+ + +
Sbjct: 182 VTFSTLIDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNALVNGLCKADKMERAHAMIES 241
Query: 402 MRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCG-----FPPDQKAKNILLSLA 456
M G+ P+ ++ ++DA+ K D A+ M S G PD+ NIL++ A
Sbjct: 242 MVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVLVPDKVTFNILIAGA 301
Query: 457 KTADERNEANELLGNFNHPNNEPGI 481
A +A+ L N +P +
Sbjct: 302 CKAGNFEQASALFEEMVAKNLQPDV 326
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/259 (22%), Positives = 106/259 (40%), Gaps = 40/259 (15%)
Query: 271 VVSYALLINAYGKARREEEALAVFE-EMLDAGVRPTHKAYNILLDAFAISGMVDQARTVF 329
V Y +++ + +A AL +F EM GV PT YN +++ S + +F
Sbjct: 1 VADYNIVLQSLCRAGDTARALEIFRGEMARDGVAPTIVTYNTIINGLCKSNDLGAGMELF 60
Query: 330 KCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKV 389
+ + PD+ +Y T++ + A D+E A + + G VPNV+TY LI G KV
Sbjct: 61 EELVERGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRGCVPNVVTYSVLINGLCKV 120
Query: 390 NNLEKMMEIYDKMR----------------VNG-----------------------IKPN 410
+++ E+ +M ++G + P+
Sbjct: 121 GRIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPD 180
Query: 411 QTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLG 470
F+T++D K D A + +M + G+ P+ N L++ AD+ A+ ++
Sbjct: 181 TVTFSTLIDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNALVNGLCKADKMERAHAMIE 240
Query: 471 NFNHPNNEPGINGLSISVD 489
+ P + S+ VD
Sbjct: 241 SMVDKGVTPDVITYSVLVD 259
>gi|326492636|dbj|BAJ90174.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 631
Score = 145 bits (366), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 107/446 (23%), Positives = 191/446 (42%), Gaps = 32/446 (7%)
Query: 97 MDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRR 156
+ + L+TA Q F +L+ M+ G P + AL+ ++ GR A + F +
Sbjct: 100 VTYTTLLTAVTNQRAFEAIPSLLAGMDAAGLRPDAIFFNALINSFVEAGRMGEATSTFWK 159
Query: 157 MQSSGP--RPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEK--------SPLKPDQKM 206
M P RP+ T+ ++K F A + E++ +F + + S ++P+
Sbjct: 160 MSRHHPGCRPTISTFNTLIKGFGIAGRPDESQRIFDMMAGGDGDGDRDRVASTVRPNLTT 219
Query: 207 FHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSK---IYDQMQ 263
+++++ + E+A + M RGV+ VTYN++ S E + + +M
Sbjct: 220 YNILVKAWCDHRRLEEAWGVVGRMRARGVEPDVVTYNTVASAYAKNDETWRAEELVVEMV 279
Query: 264 RAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVD 323
RA L+ ++ +++ Y + R EEAL +M DAGV P +N LL F +
Sbjct: 280 RARLRTSERTWGIIVGGYCREGRLEEALRCVRQMKDAGVLPNVIVFNTLLKGFLDANDTA 339
Query: 324 QARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLI 383
A V M PDI +Y+ L+A+ + M K F ++ + G P+ Y L
Sbjct: 340 AADDVLGLMEHFGIKPDIVTYSHQLNAFSSLGHMAKCSKVFDKMVEAGIEPDPQVYSILA 399
Query: 384 KGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFP 443
KG+ + K E+ ++M G++PN FTT++ + D D+A Y++M G
Sbjct: 400 KGHVRAQQPGKAEELLERMCRLGVRPNVVTFTTVISGWCSVADMDNATRVYRKMRDAGVR 459
Query: 444 PDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGINGLSI----------------- 486
P+ + L+ + +A E+L P + S+
Sbjct: 460 PNLRTFETLIWGYSEQKQPWKAEEVLQMMQEAGIRPKQSTYSLVADAWKAVGLVKNANRT 519
Query: 487 --SVDEEDDDDDDDEDDDDNIYHDGD 510
S D+ + +D D+ D+ HD D
Sbjct: 520 VGSPDDRRRPNANDHDEPDSRPHDDD 545
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 68/298 (22%), Positives = 136/298 (45%), Gaps = 6/298 (2%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + +L+ A+ +A V+ M +G P VV++ + AY + AE +
Sbjct: 216 NLTTYNILVKAWCDHRRLEEAWGVVGRMRARGVEPDVVTYNTVASAYAKNDETWRAEELV 275
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
M + R S T+ II+ + + +EA + D + + P+ +F+ ++ +
Sbjct: 276 VEMVRARLRTSERTWGIIVGGYCREGRLEEALRCVRQMKD---AGVLPNVIVFNTLLKGF 332
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTY-NSLMSFET--NYKEVSKIYDQMQRAGLQPDV 271
A A + LM G++ VTY + L +F + + + SK++D+M AG++PD
Sbjct: 333 LDANDTAAADDVLGLMEHFGIKPDIVTYSHQLNAFSSLGHMAKCSKVFDKMVEAGIEPDP 392
Query: 272 VSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKC 331
Y++L + +A++ +A + E M GVRP + ++ + +D A V++
Sbjct: 393 QVYSILAKGHVRAQQPGKAEELLERMCRLGVRPNVVTFTTVISGWCSVADMDNATRVYRK 452
Query: 332 MRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKV 389
MR P++ ++ T++ Y AE+ + +++ G P TY + + V
Sbjct: 453 MRDAGVRPNLRTFETLIWGYSEQKQPWKAEEVLQMMQEAGIRPKQSTYSLVADAWKAV 510
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/257 (22%), Positives = 130/257 (50%), Gaps = 9/257 (3%)
Query: 76 WNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHT 135
W V+E +R + +E + +++ Y ++G +A + + M G P+V+
Sbjct: 269 WRAEELVVEMVRAR--LRTSERTWGIIVGGYCREGRLEEALRCVRQMKDAGVLPNVIVFN 326
Query: 136 ALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDE 195
L++ + A+ + M+ G +P +TY L F + +VF +++
Sbjct: 327 TLLKGFLDANDTAAADDVLGLMEHFGIKPDIVTYSHQLNAFSSLGHMAKCSKVFDKMVE- 385
Query: 196 EKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEV 255
+ ++PD +++ ++ + +A KA +L M GV+ + VT+ +++S + ++
Sbjct: 386 --AGIEPDPQVYSILAKGHVRAQQPGKAEELLERMCRLGVRPNVVTFTTVISGWCSVADM 443
Query: 256 ---SKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNIL 312
+++Y +M+ AG++P++ ++ LI Y + ++ +A V + M +AG+RP Y+++
Sbjct: 444 DNATRVYRKMRDAGVRPNLRTFETLIWGYSEQKQPWKAEEVLQMMQEAGIRPKQSTYSLV 503
Query: 313 LDAFAISGMVDQA-RTV 328
DA+ G+V A RTV
Sbjct: 504 ADAWKAVGLVKNANRTV 520
>gi|168012346|ref|XP_001758863.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162690000|gb|EDQ76369.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 367
Score = 145 bits (366), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 88/355 (24%), Positives = 177/355 (49%), Gaps = 7/355 (1%)
Query: 129 PSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEV 188
P+ ++T ++ GR G A +F M SSG ++ ++ + FK+A +
Sbjct: 8 PNGHTYTLVLGVLGRAGLTIQARELFDEMLSSGVEVGLHSFNSMIGAYARKGLFKKAWRM 67
Query: 189 FMTLLDEEKSPLKPDQKMFHMMIYMYKKAG-GYEKARKLFALMAERGVQQSTVTYNSLMS 247
+ D +S ++ D+ ++ K E A K+F+ + E G+ TYN+L+S
Sbjct: 68 YE---DMVESGIQADEITLSTLLSGVGKTQLPVETAEKIFSKIKENGILPRVETYNTLLS 124
Query: 248 FET---NYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRP 304
+ + + ++ +MQR + P+++++ L+ + + R +EA V++ +LDAG++P
Sbjct: 125 VLSRGGHTERCKELEIEMQRLEVVPNIITFNTLLMMHVQGGRLKEAAEVYQRILDAGLKP 184
Query: 305 THKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFF 364
T Y L+ + + +A VF MRR C PD+ Y+ M+S Y A E A F
Sbjct: 185 TVVTYTGLVQMYCRASKHKEAIEVFLEMRRVGCKPDLMIYSLMISVYGKAGSAEEAALVF 244
Query: 365 RRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKN 424
R+L+ DG++PNV+T+ LI+ + ++++ +++M +G P+ T++ +M AYG+
Sbjct: 245 RQLQNDGYIPNVVTWCCLIQAFGWQGKMQEIGAFFNEMLASGCLPDLTLYNVMMGAYGRY 304
Query: 425 KDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEP 479
A + ++ M++ G P+ + + ++ + + +A +L P
Sbjct: 305 GHSVQAAILFRRMQAQGISPNAVSYDTMIQAYCHSKQAADAQIVLDQMTRAGFSP 359
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 82/362 (22%), Positives = 179/362 (49%), Gaps = 7/362 (1%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + +++ G+ G +A ++ M G + S +++ AY R G +K A ++
Sbjct: 9 NGHTYTLVLGVLGRAGLTIQARELFDEMLSSGVEVGLHSFNSMIGAYARKGLFKKAWRMY 68
Query: 155 RRMQSSGPRPSALTYQIILKLFVEAN-KFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYM 213
M SG + +T +L + + AE++F + +++ + P + ++ ++ +
Sbjct: 69 EDMVESGIQADEITLSTLLSGVGKTQLPVETAEKIFSKI---KENGILPRVETYNTLLSV 125
Query: 214 YKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETN---YKEVSKIYDQMQRAGLQPD 270
+ G E+ ++L M V + +T+N+L+ KE +++Y ++ AGL+P
Sbjct: 126 LSRGGHTERCKELEIEMQRLEVVPNIITFNTLLMMHVQGGRLKEAAEVYQRILDAGLKPT 185
Query: 271 VVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFK 330
VV+Y L+ Y +A + +EA+ VF EM G +P Y++++ + +G ++A VF+
Sbjct: 186 VVTYTGLVQMYCRASKHKEAIEVFLEMRRVGCKPDLMIYSLMISVYGKAGSAEEAALVFR 245
Query: 331 CMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVN 390
++ D P++ ++ ++ A+ M+ FF + G +P++ Y ++ Y +
Sbjct: 246 QLQNDGYIPNVVTWCCLIQAFGWQGKMQEIGAFFNEMLASGCLPDLTLYNVMMGAYGRYG 305
Query: 391 NLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKN 450
+ + ++ +M+ GI PN + T++ AY +K A + +M GF PD+ ++
Sbjct: 306 HSVQAAILFRRMQAQGISPNAVSYDTMIQAYCHSKQAADAQIVLDQMTRAGFSPDRSSRA 365
Query: 451 IL 452
+L
Sbjct: 366 ML 367
Score = 118 bits (296), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 63/254 (24%), Positives = 140/254 (55%), Gaps = 4/254 (1%)
Query: 196 EKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETN---Y 252
+K LKP+ + +++ + +AG +AR+LF M GV+ ++NS++ +
Sbjct: 2 QKGRLKPNGHTYTLVLGVLGRAGLTIQARELFDEMLSSGVEVGLHSFNSMIGAYARKGLF 61
Query: 253 KEVSKIYDQMQRAGLQPDVVSYALLINAYGKARRE-EEALAVFEEMLDAGVRPTHKAYNI 311
K+ ++Y+ M +G+Q D ++ + L++ GK + E A +F ++ + G+ P + YN
Sbjct: 62 KKAWRMYEDMVESGIQADEITLSTLLSGVGKTQLPVETAEKIFSKIKENGILPRVETYNT 121
Query: 312 LLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDG 371
LL + G ++ + + M+R P+I ++ T+L +V ++ A + ++R+ G
Sbjct: 122 LLSVLSRGGHTERCKELEIEMQRLEVVPNIITFNTLLMMHVQGGRLKEAAEVYQRILDAG 181
Query: 372 FVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAV 431
P V+TY L++ Y + + ++ +E++ +MR G KP+ I++ ++ YGK + A
Sbjct: 182 LKPTVVTYTGLVQMYCRASKHKEAIEVFLEMRRVGCKPDLMIYSLMISVYGKAGSAEEAA 241
Query: 432 VWYKEMESCGFPPD 445
+ ++++++ G+ P+
Sbjct: 242 LVFRQLQNDGYIPN 255
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 59/230 (25%), Positives = 110/230 (47%), Gaps = 3/230 (1%)
Query: 262 MQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGM 321
+Q+ L+P+ +Y L++ G+A +A +F+EML +GV ++N ++ A+A G+
Sbjct: 1 VQKGRLKPNGHTYTLVLGVLGRAGLTIQARELFDEMLSSGVEVGLHSFNSMIGAYARKGL 60
Query: 322 VDQARTVFKCMRRDRCSPDICSYTTMLSAYVNAS-DMEGAEKFFRRLKQDGFVPNVITYG 380
+A +++ M D + +T+LS +E AEK F ++K++G +P V TY
Sbjct: 61 FKKAWRMYEDMVESGIQADEITLSTLLSGVGKTQLPVETAEKIFSKIKENGILPRVETYN 120
Query: 381 TLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESC 440
TL+ ++ + E+ E+ +M+ + PN F T++ + + A Y+ +
Sbjct: 121 TLLSVLSRGGHTERCKELEIEMQRLEVVPNIITFNTLLMMHVQGGRLKEAAEVYQRILDA 180
Query: 441 GFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPG--INGLSISV 488
G P L+ + A + EA E+ +P I L ISV
Sbjct: 181 GLKPTVVTYTGLVQMYCRASKHKEAIEVFLEMRRVGCKPDLMIYSLMISV 230
>gi|326533642|dbj|BAK05352.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 860
Score = 145 bits (366), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 88/336 (26%), Positives = 166/336 (49%), Gaps = 9/336 (2%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYA--PSVVSHTALMEAYGRGGRYKNAEA 152
N + + +++ A +A +L M K+G A P VV+++ ++ + G A +
Sbjct: 227 NAVSYSIVLKALCDNSMSQRALDLLQMMAKQGGACSPDVVAYSTVIHGFFNEGETGKACS 286
Query: 153 IFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIY 212
+F M G +P +TY +I+ +A +AE V + + +PD + MI+
Sbjct: 287 LFHEMTRQGVKPDVVTYNLIIDALCKARAMDKAELVLRQMTTDGA---QPDTVTYSCMIH 343
Query: 213 MYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNY---KEVSKIYDQMQRAGLQP 269
Y G ++A K+F M +RG+ + VT NS ++ + KE ++ +D M G +P
Sbjct: 344 GYATLGRLKEAAKMFREMKKRGLIPNIVTCNSFLASLCKHGRSKEAAEFFDSMTAKGHKP 403
Query: 270 DVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVF 329
D+ SY L++ Y + + +F M G+ + IL+ A+A GMVD A +F
Sbjct: 404 DIFSYCTLLHGYASEGCFADMIGLFNSMKSNGIAANCHVFTILIHAYAKRGMVDDAMLIF 463
Query: 330 KCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKV 389
M++ SPD+ +Y+T++S + + A + F ++ G PN Y ++I+G+
Sbjct: 464 TEMQQQGVSPDVVTYSTVISTFSRMGRLTDAMEKFNQMVARGIQPNTAVYSSIIQGFCMH 523
Query: 390 NNLEKMMEIYDKMRVNGI-KPNQTIFTTIMDAYGKN 424
L K E+ +M GI +P+ F++++++ K+
Sbjct: 524 GGLVKAKELVSEMINKGIPRPDIVFFSSVINSLCKD 559
Score = 142 bits (358), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 91/358 (25%), Positives = 174/358 (48%), Gaps = 11/358 (3%)
Query: 129 PSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEV 188
P+ ++ LM+ R R A+F + +G + +T +LK AN+ +EA V
Sbjct: 155 PTFCTYNILMDCCCRARRPDLGLALFGCILRTGLKMDQITANTLLKCLCYANRTEEAVNV 214
Query: 189 FMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQS--TVTYNSLM 246
+ + E P+ + +++ ++A L +MA++G S V Y++++
Sbjct: 215 LLHRMSELGC--VPNAVSYSIVLKALCDNSMSQRALDLLQMMAKQGGACSPDVVAYSTVI 272
Query: 247 SFETNYKEVSK---IYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVR 303
N E K ++ +M R G++PDVV+Y L+I+A KAR ++A V +M G +
Sbjct: 273 HGFFNEGETGKACSLFHEMTRQGVKPDVVTYNLIIDALCKARAMDKAELVLRQMTTDGAQ 332
Query: 304 PTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKF 363
P Y+ ++ +A G + +A +F+ M++ P+I + + L++ + A +F
Sbjct: 333 PDTVTYSCMIHGYATLGRLKEAAKMFREMKKRGLIPNIVTCNSFLASLCKHGRSKEAAEF 392
Query: 364 FRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGK 423
F + G P++ +Y TL+ GYA M+ +++ M+ NGI N +FT ++ AY K
Sbjct: 393 FDSMTAKGHKPDIFSYCTLLHGYASEGCFADMIGLFNSMKSNGIAANCHVFTILIHAYAK 452
Query: 424 NKDFDSAVVWYKEMESCGFPPDQKAKNILLS----LAKTADERNEANELLGNFNHPNN 477
D A++ + EM+ G PD + ++S + + D + N+++ PN
Sbjct: 453 RGMVDDAMLIFTEMQQQGVSPDVVTYSTVISTFSRMGRLTDAMEKFNQMVARGIQPNT 510
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 82/382 (21%), Positives = 168/382 (43%), Gaps = 7/382 (1%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
+ + K G +A + M KG+ P + S+ L+ Y G + + +F M+S+G
Sbjct: 376 FLASLCKHGRSKEAAEFFDSMTAKGHKPDIFSYCTLLHGYASEGCFADMIGLFNSMKSNG 435
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
+ + I++ + + +A +F + ++ + PD + +I + + G
Sbjct: 436 IAANCHVFTILIHAYAKRGMVDDAMLIFTEM---QQQGVSPDVVTYSTVISTFSRMGRLT 492
Query: 222 KARKLFALMAERGVQQSTVTYNSLM---SFETNYKEVSKIYDQMQRAGL-QPDVVSYALL 277
A + F M RG+Q +T Y+S++ + ++ +M G+ +PD+V ++ +
Sbjct: 493 DAMEKFNQMVARGIQPNTAVYSSIIQGFCMHGGLVKAKELVSEMINKGIPRPDIVFFSSV 552
Query: 278 INAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRC 337
IN+ K R +A +F+ D G RP +N L+D + + G +D+A + M
Sbjct: 553 INSLCKDGRVMDAHDIFDLATDIGERPGVITFNSLIDGYCLVGKMDKAFKILDAMEVVGV 612
Query: 338 SPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMME 397
PDI +Y T+L Y + FR +++ G PN +TYG ++ G + +
Sbjct: 613 EPDIVTYNTLLDGYFKNGRINDGLTLFREMQRKGVKPNTVTYGIMLAGLFRAGRTVAARK 672
Query: 398 IYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAK 457
+ +M +G +I+ I+ +N D A++ ++++ + N +++
Sbjct: 673 KFHEMIESGTTVTVSIYGIILGGLCRNNCADEAIILFQKLGTMNVKFSITILNTMINAMY 732
Query: 458 TADERNEANELLGNFNHPNNEP 479
+ EA EL + P
Sbjct: 733 KVQRKEEAKELFATISASGLLP 754
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 93/374 (24%), Positives = 170/374 (45%), Gaps = 5/374 (1%)
Query: 99 FLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQ 158
F +LI AY K+G + A + + M ++G +P VV+++ ++ + R GR +A F +M
Sbjct: 443 FTILIHAYAKRGMVDDAMLIFTEMQQQGVSPDVVTYSTVISTFSRMGRLTDAMEKFNQMV 502
Query: 159 SSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAG 218
+ G +P+ Y I++ F +A+E+ +++ K +PD F +I K G
Sbjct: 503 ARGIQPNTAVYSSIIQGFCMHGGLVKAKELVSEMIN--KGIPRPDIVFFSSVINSLCKDG 560
Query: 219 GYEKARKLFALMAERGVQQSTVTYNSLM---SFETNYKEVSKIYDQMQRAGLQPDVVSYA 275
A +F L + G + +T+NSL+ + KI D M+ G++PD+V+Y
Sbjct: 561 RVMDAHDIFDLATDIGERPGVITFNSLIDGYCLVGKMDKAFKILDAMEVVGVEPDIVTYN 620
Query: 276 LLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRD 335
L++ Y K R + L +F EM GV+P Y I+L +G AR F M
Sbjct: 621 TLLDGYFKNGRINDGLTLFREMQRKGVKPNTVTYGIMLAGLFRAGRTVAARKKFHEMIES 680
Query: 336 RCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKM 395
+ + Y +L + + A F++L ++ T+I KV E+
Sbjct: 681 GTTVTVSIYGIILGGLCRNNCADEAIILFQKLGTMNVKFSITILNTMINAMYKVQRKEEA 740
Query: 396 MEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSL 455
E++ + +G+ PN++ + ++ K+ + A + ME G P + N ++ +
Sbjct: 741 KELFATISASGLLPNESTYGVMIINLLKDGGVEDANNMFSSMEKSGIVPGSRLLNRIIRM 800
Query: 456 AKTADERNEANELL 469
E +A L
Sbjct: 801 LLEKGEIAKAGNYL 814
Score = 128 bits (322), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 84/361 (23%), Positives = 164/361 (45%), Gaps = 9/361 (2%)
Query: 98 DFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRM 157
+ L+ Y +G F + + M G A + T L+ AY + G +A IF M
Sbjct: 407 SYCTLLHGYASEGCFADMIGLFNSMKSNGIAANCHVFTILIHAYAKRGMVDDAMLIFTEM 466
Query: 158 QSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKA 217
Q G P +TY ++ F + +A E F ++ ++P+ ++ +I +
Sbjct: 467 QQQGVSPDVVTYSTVISTFSRMGRLTDAMEKFNQMVARG---IQPNTAVYSSIIQGFCMH 523
Query: 218 GGYEKARKLFALMAERGVQQSTVTY-----NSLMSFETNYKEVSKIYDQMQRAGLQPDVV 272
GG KA++L + M +G+ + + + NSL + + I+D G +P V+
Sbjct: 524 GGLVKAKELVSEMINKGIPRPDIVFFSSVINSLCK-DGRVMDAHDIFDLATDIGERPGVI 582
Query: 273 SYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCM 332
++ LI+ Y + ++A + + M GV P YN LLD + +G ++ T+F+ M
Sbjct: 583 TFNSLIDGYCLVGKMDKAFKILDAMEVVGVEPDIVTYNTLLDGYFKNGRINDGLTLFREM 642
Query: 333 RRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNL 392
+R P+ +Y ML+ A A K F + + G V YG ++ G + N
Sbjct: 643 QRKGVKPNTVTYGIMLAGLFRAGRTVAARKKFHEMIESGTTVTVSIYGIILGGLCRNNCA 702
Query: 393 EKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNIL 452
++ + ++ K+ +K + TI T+++A K + + A + + + G P++ ++
Sbjct: 703 DEAIILFQKLGTMNVKFSITILNTMINAMYKVQRKEEAKELFATISASGLLPNESTYGVM 762
Query: 453 L 453
+
Sbjct: 763 I 763
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/259 (23%), Positives = 112/259 (43%), Gaps = 9/259 (3%)
Query: 232 ERGVQQST---VTYNSLMSFETNYKEVS---KIYDQMQRAGLQPDVVSYALLINAYGKAR 285
E G Q + TYN LM + ++ + R GL+ D ++ L+ A
Sbjct: 147 EAGTQVAVPTFCTYNILMDCCCRARRPDLGLALFGCILRTGLKMDQITANTLLKCLCYAN 206
Query: 286 REEEALAVF-EEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRD--RCSPDIC 342
R EEA+ V M + G P +Y+I+L A + M +A + + M + CSPD+
Sbjct: 207 RTEEAVNVLLHRMSELGCVPNAVSYSIVLKALCDNSMSQRALDLLQMMAKQGGACSPDVV 266
Query: 343 SYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKM 402
+Y+T++ + N + A F + + G P+V+TY +I K ++K + +M
Sbjct: 267 AYSTVIHGFFNEGETGKACSLFHEMTRQGVKPDVVTYNLIIDALCKARAMDKAELVLRQM 326
Query: 403 RVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADER 462
+G +P+ ++ ++ Y A ++EM+ G P+ N L+
Sbjct: 327 TTDGAQPDTVTYSCMIHGYATLGRLKEAAKMFREMKKRGLIPNIVTCNSFLASLCKHGRS 386
Query: 463 NEANELLGNFNHPNNEPGI 481
EA E + ++P I
Sbjct: 387 KEAAEFFDSMTAKGHKPDI 405
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/232 (23%), Positives = 109/232 (46%), Gaps = 6/232 (2%)
Query: 97 MDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRR 156
+ F LI Y G +KA K+L M G P +V++ L++ Y + GR + +FR
Sbjct: 582 ITFNSLIDGYCLVGKMDKAFKILDAMEVVGVEPDIVTYNTLLDGYFKNGRINDGLTLFRE 641
Query: 157 MQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKK 216
MQ G +P+ +TY I+L A + A + F +++ S ++ +++ +
Sbjct: 642 MQRKGVKPNTVTYGIMLAGLFRAGRTVAARKKFHEMIE---SGTTVTVSIYGIILGGLCR 698
Query: 217 AGGYEKARKLFALMAERGVQQSTVTYNSLMS--FETNYKEVSK-IYDQMQRAGLQPDVVS 273
++A LF + V+ S N++++ ++ KE +K ++ + +GL P+ +
Sbjct: 699 NNCADEAIILFQKLGTMNVKFSITILNTMINAMYKVQRKEEAKELFATISASGLLPNEST 758
Query: 274 YALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQA 325
Y ++I K E+A +F M +G+ P + N ++ G + +A
Sbjct: 759 YGVMIINLLKDGGVEDANNMFSSMEKSGIVPGSRLLNRIIRMLLEKGEIAKA 810
>gi|413952776|gb|AFW85425.1| chloroplast RNA splicing4 [Zea mays]
Length = 1435
Score = 145 bits (366), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 120/483 (24%), Positives = 217/483 (44%), Gaps = 61/483 (12%)
Query: 27 GKKNWRRLMNQIEEVGSAVAVLRSERTRGQPLPKDLVLGTLVRLKQLKKWNVVSEVLEWL 86
G+ +WRR ++ E + RS + + +VLG L R +Q ++ EV +L
Sbjct: 166 GESSWRRALDAFEWLA------RSSAPASRAVA--VVLGVLGRARQ---DSIAEEV--FL 212
Query: 87 RIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGR 146
R ++ F ++ Y + G F+ A ++L M+ +G P +VS L+ A + G
Sbjct: 213 RFAGEGATVQV-FNAMMGVYARSGRFDDARQLLDTMHDRGIDPDLVSFNTLINARSKSGC 271
Query: 147 YKNAEAI--FRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQ 204
A+ ++ SG RP +TY ++ +++ ++A VF ++ E +PD
Sbjct: 272 LAAGVALDLLFEVRQSGLRPDVITYNTLISACSQSSNLEDAVTVFEDMIASE---CRPDL 328
Query: 205 KMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLM------------------ 246
++ M+ ++ + G E+A +LF + E+G +TYNSL+
Sbjct: 329 WTYNAMVSVHGRCGKAEEAERLFRELVEKGFMPDAITYNSLLYAFAKEGNVDKVEHTCEQ 388
Query: 247 ----SFETN----------YKEVSKI------YDQMQRAGLQPDVVSYALLINAYGKARR 286
F+ N Y ++ ++ YD+M+ G PD V+Y ++I++ GK R
Sbjct: 389 LVKAGFKKNEITYNTMIHMYGKMGRLDLAVGLYDEMRAMGCTPDAVTYTVMIDSLGKMNR 448
Query: 287 EEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTT 346
EA V E+M DAG++PT A++ L+ A+A G A F CM PD +Y
Sbjct: 449 IAEAGKVLEDMTDAGLKPTLIAFSALICAYAKGGRRADAENTFDCMIASGVKPDRLAYLV 508
Query: 347 MLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNG 406
ML + + D E +R++ D + P+ Y L+ AK + E++ E+ M +
Sbjct: 509 MLDVFARSGDTEKMLCLYRKMMNDNYRPDDDMYQVLLVALAKEDKCEEIEEVIQDMELL- 567
Query: 407 IKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEAN 466
+ N I +T++ K + K+ G+ PD K+ +++ ++ E
Sbjct: 568 CRMNLGIISTMLI---KARCVSQGAKLLKKACLQGYKPDIKSLRSIMNAYVMTEKHEEGL 624
Query: 467 ELL 469
LL
Sbjct: 625 SLL 627
Score = 130 bits (326), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 98/405 (24%), Positives = 176/405 (43%), Gaps = 8/405 (1%)
Query: 72 QLKKWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSV 131
++K W +++ LR S D + LI AY + G + KA V M K G P+V
Sbjct: 758 KIKLWQQAEILVKGLRQASGIDRRIWN--ALIHAYAESGLYEKARAVFDNMIKTGPLPTV 815
Query: 132 VSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMT 191
S +M A GR + +Q + S T ++L F +A E +++
Sbjct: 816 DSVNGMMRALIVDGRLDELYVVVEELQDMNFKISKSTVLLLLDAFAKAGDVFEVMKIYNG 875
Query: 192 LLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFET- 250
+ + + P+ ++ MI + + + A M G + N+L++ T
Sbjct: 876 M---KAAGYLPNMHLYRSMISLLCHHNRFRDVELMIAEMEGAGFKPDLAILNALLNMYTA 932
Query: 251 --NYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKA 308
N+ +++Y + AGL+PD +Y LI Y ++ R EE + EM G+ P ++
Sbjct: 933 AGNFDRTTQVYRSILEAGLEPDEDTYNTLIVMYCRSFRPEEGFTLLNEMGKRGLTPKLQS 992
Query: 309 YNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLK 368
Y LL A A + + +QA +F+ MR + Y M+ Y NA + AE +K
Sbjct: 993 YKSLLAASAKAELREQADQIFEEMRSKSYQLNRSIYHMMMKIYRNAGNHSKAENLLAVMK 1052
Query: 369 QDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFD 428
+DG P + T L+ Y + + + ++ + ++ + ++T+ DAY KN D++
Sbjct: 1053 EDGIEPTIATMHILMTSYGTAGQPREAENVLNNLKSSSLEVSTLPYSTVFDAYLKNGDYN 1112
Query: 429 SAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFN 473
EM+ G PD + + A ++ +A LL +
Sbjct: 1113 HGTTKLLEMKRDGVEPDHQVWTCFIRAASLCEQTADAILLLKSLQ 1157
Score = 128 bits (321), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 92/407 (22%), Positives = 178/407 (43%), Gaps = 10/407 (2%)
Query: 67 LVRLKQLKKWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKG 126
+VR W + EWL S + ++ + +Q AE+V F+ G
Sbjct: 161 VVRAVGESSWRRALDAFEWLARSSAPASRAVAVVLGVLGRARQDSI--AEEV--FLRFAG 216
Query: 127 YAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAE 186
+V A+M Y R GR+ +A + M G P +++ ++ ++ A
Sbjct: 217 EGATVQVFNAMMGVYARSGRFDDARQLLDTMHDRGIDPDLVSFNTLINARSKSGCL--AA 274
Query: 187 EVFMTLLDE-EKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSL 245
V + LL E +S L+PD ++ +I ++ E A +F M + TYN++
Sbjct: 275 GVALDLLFEVRQSGLRPDVITYNTLISACSQSSNLEDAVTVFEDMIASECRPDLWTYNAM 334
Query: 246 MSFETNY---KEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGV 302
+S +E +++ ++ G PD ++Y L+ A+ K ++ E+++ AG
Sbjct: 335 VSVHGRCGKAEEAERLFRELVEKGFMPDAITYNSLLYAFAKEGNVDKVEHTCEQLVKAGF 394
Query: 303 RPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEK 362
+ YN ++ + G +D A ++ MR C+PD +YT M+ + + + A K
Sbjct: 395 KKNEITYNTMIHMYGKMGRLDLAVGLYDEMRAMGCTPDAVTYTVMIDSLGKMNRIAEAGK 454
Query: 363 FFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYG 422
+ G P +I + LI YAK +D M +G+KP++ + ++D +
Sbjct: 455 VLEDMTDAGLKPTLIAFSALICAYAKGGRRADAENTFDCMIASGVKPDRLAYLVMLDVFA 514
Query: 423 KNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELL 469
++ D + + Y++M + + PD +LL D+ E E++
Sbjct: 515 RSGDTEKMLCLYRKMMNDNYRPDDDMYQVLLVALAKEDKCEEIEEVI 561
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 81/379 (21%), Positives = 160/379 (42%), Gaps = 36/379 (9%)
Query: 100 LMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQS 159
+++I AYGK + +AE ++ + + + + AL+ AY G Y+ A A+F M
Sbjct: 750 VIIIEAYGKIKLWQQAEILVKGLRQASGIDRRIWN-ALIHAYAESGLYEKARAVFDNMIK 808
Query: 160 SGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGG 219
+GP P+ + +++ + + +E+++ + + + K + +++ + KAG
Sbjct: 809 TGPLPTVDSVNGMMRALIVDGRL---DELYVVVEELQDMNFKISKSTVLLLLDAFAKAG- 864
Query: 220 YEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSKIYDQMQRAGLQPDVVSYALLIN 279
+ EV KIY+ M+ AG P++ Y +I+
Sbjct: 865 -------------------------------DVFEVMKIYNGMKAAGYLPNMHLYRSMIS 893
Query: 280 AYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSP 339
R + + EM AG +P N LL+ + +G D+ V++ + P
Sbjct: 894 LLCHHNRFRDVELMIAEMEGAGFKPDLAILNALLNMYTAAGNFDRTTQVYRSILEAGLEP 953
Query: 340 DICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIY 399
D +Y T++ Y + E + + G P + +Y +L+ AK E+ +I+
Sbjct: 954 DEDTYNTLIVMYCRSFRPEEGFTLLNEMGKRGLTPKLQSYKSLLAASAKAELREQADQIF 1013
Query: 400 DKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTA 459
++MR + N++I+ +M Y + A M+ G P +IL++ TA
Sbjct: 1014 EEMRSKSYQLNRSIYHMMMKIYRNAGNHSKAENLLAVMKEDGIEPTIATMHILMTSYGTA 1073
Query: 460 DERNEANELLGNFNHPNNE 478
+ EA +L N + E
Sbjct: 1074 GQPREAENVLNNLKSSSLE 1092
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 87/390 (22%), Positives = 166/390 (42%), Gaps = 53/390 (13%)
Query: 28 KKNWRRLMNQIEEVG---SAVAVLRSERTRGQPLPK-DLVLGTLVRL---KQLKKWNVVS 80
++ W L++ E G A AV + G PLP D V G + L +L + VV
Sbjct: 780 RRIWNALIHAYAESGLYEKARAVFDNMIKTG-PLPTVDSVNGMMRALIVDGRLDELYVVV 838
Query: 81 EVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEA 140
E L+ + + ++ L+L+ A+ K GD + K+ + M GY P++ + +++
Sbjct: 839 EELQDMNFK----ISKSTVLLLLDAFAKAGDVFEVMKIYNGMKAAGYLPNMHLYRSMISL 894
Query: 141 YGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPL 200
R+++ E + M+ +G +P +L ++ A F +V+ ++L+ + L
Sbjct: 895 LCHHNRFRDVELMIAEMEGAGFKPDLAILNALLNMYTAAGNFDRTTQVYRSILE---AGL 951
Query: 201 KPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLM-------------- 246
+PD+ ++ +I MY ++ E+ L M +RG+ +Y SL+
Sbjct: 952 EPDEDTYNTLIVMYCRSFRPEEGFTLLNEMGKRGLTPKLQSYKSLLAASAKAELREQADQ 1011
Query: 247 --------SFETN---YKEVSKIYDQ-------------MQRAGLQPDVVSYALLINAYG 282
S++ N Y + KIY M+ G++P + + +L+ +YG
Sbjct: 1012 IFEEMRSKSYQLNRSIYHMMMKIYRNAGNHSKAENLLAVMKEDGIEPTIATMHILMTSYG 1071
Query: 283 KARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDIC 342
A + EA V + + + + Y+ + DA+ +G + T M+RD PD
Sbjct: 1072 TAGQPREAENVLNNLKSSSLEVSTLPYSTVFDAYLKNGDYNHGTTKLLEMKRDGVEPDHQ 1131
Query: 343 SYTTMLSAYVNASDMEGAEKFFRRLKQDGF 372
+T + A A + L+ GF
Sbjct: 1132 VWTCFIRAASLCEQTADAILLLKSLQDCGF 1161
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 93/425 (21%), Positives = 187/425 (44%), Gaps = 28/425 (6%)
Query: 67 LVRLKQLKKWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKG 126
LV L + K + EV IQ M+ ++ T K ++ K+L +G
Sbjct: 545 LVALAKEDKCEEIEEV-----IQDMELLCRMNLGIISTMLIKARCVSQGAKLLKKACLQG 599
Query: 127 YAPSVVSHTALMEAYGRGGRYKNA----EAIFRRMQSSGPRPSALTYQIILKLFVEANKF 182
Y P + S ++M AY +++ E I + S S + ++ + + +
Sbjct: 600 YKPDIKSLRSIMNAYVMTEKHEEGLSLLECICEHVSFSQDLISECSIMLLCRKQTSISAY 659
Query: 183 KEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTY 242
++ + M K P + + ++ +I +A + +A ++F M G++ S Y
Sbjct: 660 EQYSQRLML-----KYPGQ-NCNLYEYLITCLIEAEFFSEACQVFCDMQFIGIEASKSIY 713
Query: 243 NSLMS--FETNYKEVS-KIYDQMQRAGLQPDVVSY-ALLINAYGKARREEEALAVFEEML 298
S++S + + E + ++ D ++G+ +++S ++I AYGK + ++A E+L
Sbjct: 714 ESIISTYCKLGFPETAHRLMDDALQSGIPLNILSCRVIIIEAYGKIKLWQQA-----EIL 768
Query: 299 DAGVRPT----HKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNA 354
G+R + +N L+ A+A SG+ ++AR VF M + P + S M+ A +
Sbjct: 769 VKGLRQASGIDRRIWNALIHAYAESGLYEKARAVFDNMIKTGPLPTVDSVNGMMRALIVD 828
Query: 355 SDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIF 414
++ L+ F + T L+ +AK ++ ++M+IY+ M+ G PN ++
Sbjct: 829 GRLDELYVVVEELQDMNFKISKSTVLLLLDAFAKAGDVFEVMKIYNGMKAAGYLPNMHLY 888
Query: 415 TTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNH 474
+++ + F + EME GF PD N LL++ A + ++ +
Sbjct: 889 RSMISLLCHHNRFRDVELMIAEMEGAGFKPDLAILNALLNMYTAAGNFDRTTQVYRSILE 948
Query: 475 PNNEP 479
EP
Sbjct: 949 AGLEP 953
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 79/388 (20%), Positives = 166/388 (42%), Gaps = 6/388 (1%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
LIT + F++A +V M G S + +++ Y + G + A + SG
Sbjct: 681 LITCLIEAEFFSEACQVFCDMQFIGIEASKSIYESIISTYCKLGFPETAHRLMDDALQSG 740
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
+ L+ ++I+ K + E+ + L + D+++++ +I+ Y ++G YE
Sbjct: 741 IPLNILSCRVIIIEAYGKIKLWQQAEILVKGLRQASGI---DRRIWNALIHAYAESGLYE 797
Query: 222 KARKLFALMAERGVQQSTVTYNSLMS---FETNYKEVSKIYDQMQRAGLQPDVVSYALLI 278
KAR +F M + G + + N +M + E+ + +++Q + + LL+
Sbjct: 798 KARAVFDNMIKTGPLPTVDSVNGMMRALIVDGRLDELYVVVEELQDMNFKISKSTVLLLL 857
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCS 338
+A+ KA E + ++ M AG P Y ++ + M
Sbjct: 858 DAFAKAGDVFEVMKIYNGMKAAGYLPNMHLYRSMISLLCHHNRFRDVELMIAEMEGAGFK 917
Query: 339 PDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEI 398
PD+ +L+ Y A + + + +R + + G P+ TY TLI Y + E+ +
Sbjct: 918 PDLAILNALLNMYTAAGNFDRTTQVYRSILEAGLEPDEDTYNTLIVMYCRSFRPEEGFTL 977
Query: 399 YDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKT 458
++M G+ P + +++ A K + + A ++EM S + ++ ++++ + +
Sbjct: 978 LNEMGKRGLTPKLQSYKSLLAASAKAELREQADQIFEEMRSKSYQLNRSIYHMMMKIYRN 1037
Query: 459 ADERNEANELLGNFNHPNNEPGINGLSI 486
A ++A LL EP I + I
Sbjct: 1038 AGNHSKAENLLAVMKEDGIEPTIATMHI 1065
>gi|41152688|dbj|BAD08213.1| hypothetical protein [Oryza sativa Indica Group]
Length = 762
Score = 145 bits (366), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 104/401 (25%), Positives = 187/401 (46%), Gaps = 13/401 (3%)
Query: 63 VLGTLVRLKQLKKWNVVSEVLEWLRIQS-----WWDFNEMDFLMLITAYGKQGDFNKAEK 117
V + LK L N E LE L + + + + + +I + K+GD +KA
Sbjct: 158 VFSCTILLKGLCDENRSQEALELLHMMADDRGGGSAPDVVSYTTVINGFFKEGDSDKAYS 217
Query: 118 VLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFV 177
M + +P VV++++++ A +G A + M +G P+ +TY IL +
Sbjct: 218 TYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEVLTTMVKNGVMPNCMTYNSILHGYC 277
Query: 178 EANKFKEAEEVFMTLLDEEKS-PLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQ 236
+ + KEA + L + +S ++PD ++ ++ K G +ARK+F M +RG++
Sbjct: 278 SSEQPKEA----IGFLKKMRSDGVEPDVVTYNSLMDYLCKNGRSTEARKIFDSMTKRGLE 333
Query: 237 QSTVTYNSLM---SFETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAV 293
TY +L+ + + E+ + D M R G+ PD + +LI AY K + +EA+ V
Sbjct: 334 PDIATYCTLLQGYATKGALVEMHALLDLMVRNGIHPDHHVFNILICAYAKQEKVDEAMLV 393
Query: 294 FEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVN 353
F +M G+ P Y ++ SG VD A F+ M + +P+I YT+++ +
Sbjct: 394 FSKMRQHGLNPNVVTYGAVIGILCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHSLCI 453
Query: 354 ASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTI 413
+ AE+ + G N I + ++I + K + + +++D M G+KPN
Sbjct: 454 FDKWDKAEELILEMLDRGICLNTIFFNSIIHSHCKEGRVIESEKLFDLMVRIGVKPNVIT 513
Query: 414 FTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLS 454
++T++D Y D A M S G PD N L++
Sbjct: 514 YSTLIDGYCLAGKMDEATKLLSSMFSVGMKPDCVTYNTLIN 554
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 95/378 (25%), Positives = 175/378 (46%), Gaps = 12/378 (3%)
Query: 111 DFNKAEKVLSFMNKK------GYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRP 164
D N++++ L ++ G AP VVS+T ++ + + G A + + M P
Sbjct: 170 DENRSQEALELLHMMADDRGGGSAPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRRISP 229
Query: 165 SALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKAR 224
+TY I+ + +A EV T++ K+ + P+ ++ +++ Y + ++A
Sbjct: 230 DVVTYSSIIAALCKGQAMDKAMEVLTTMV---KNGVMPNCMTYNSILHGYCSSEQPKEAI 286
Query: 225 KLFALMAERGVQQSTVTYNSLMSFETN---YKEVSKIYDQMQRAGLQPDVVSYALLINAY 281
M GV+ VTYNSLM + E KI+D M + GL+PD+ +Y L+ Y
Sbjct: 287 GFLKKMRSDGVEPDVVTYNSLMDYLCKNGRSTEARKIFDSMTKRGLEPDIATYCTLLQGY 346
Query: 282 GKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDI 341
E A+ + M+ G+ P H +NIL+ A+A VD+A VF MR+ +P++
Sbjct: 347 ATKGALVEMHALLDLMVRNGIHPDHHVFNILICAYAKQEKVDEAMLVFSKMRQHGLNPNV 406
Query: 342 CSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDK 401
+Y ++ + ++ A +F ++ +G PN+I Y +LI + +K E+ +
Sbjct: 407 VTYGAVIGILCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHSLCIFDKWDKAEELILE 466
Query: 402 MRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADE 461
M GI N F +I+ ++ K + + M G P+ + L+ A +
Sbjct: 467 MLDRGICLNTIFFNSIIHSHCKEGRVIESEKLFDLMVRIGVKPNVITYSTLIDGYCLAGK 526
Query: 462 RNEANELLGNFNHPNNEP 479
+EA +LL + +P
Sbjct: 527 MDEATKLLSSMFSVGMKP 544
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 89/390 (22%), Positives = 171/390 (43%), Gaps = 41/390 (10%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
+I A K +KA +VL+ M K G P+ +++ +++ Y + K A ++M+S G
Sbjct: 237 IIAALCKGQAMDKAMEVLTTMVKNGVMPNCMTYNSILHGYCSSEQPKEAIGFLKKMRSDG 296
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
P +TY ++ + + EA ++F ++ K L+PD + ++ Y G
Sbjct: 297 VEPDVVTYNSLMDYLCKNGRSTEARKIFDSM---TKRGLEPDIATYCTLLQGYATKGALV 353
Query: 222 KARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSK---IYDQMQRAGLQPDVVSYALLI 278
+ L LM G+ +N L+ ++V + ++ +M++ GL P+VV+Y +I
Sbjct: 354 EMHALLDLMVRNGIHPDHHVFNILICAYAKQEKVDEAMLVFSKMRQHGLNPNVVTYGAVI 413
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAI-------------------- 318
K+ ++A+ FE+M+D G+ P Y L+ + I
Sbjct: 414 GILCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHSLCIFDKWDKAEELILEMLDRGIC 473
Query: 319 ---------------SGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKF 363
G V ++ +F M R P++ +Y+T++ Y A M+ A K
Sbjct: 474 LNTIFFNSIIHSHCKEGRVIESEKLFDLMVRIGVKPNVITYSTLIDGYCLAGKMDEATKL 533
Query: 364 FRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGK 423
+ G P+ +TY TLI GY +V+ ++ + ++ +M +G+ PN + I+
Sbjct: 534 LSSMFSVGMKPDCVTYNTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFH 593
Query: 424 NKDFDSAVVWYKEMESCGFPPDQKAKNILL 453
+ +A Y + G + NI+L
Sbjct: 594 TRRTAAAKELYVGITKSGTQLELSTYNIIL 623
Score = 128 bits (321), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 85/393 (21%), Positives = 171/393 (43%), Gaps = 12/393 (3%)
Query: 97 MDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRR 156
MD+L K G +A K+ M K+G P + ++ L++ Y G A+
Sbjct: 308 MDYLC------KNGRSTEARKIFDSMTKRGLEPDIATYCTLLQGYATKGALVEMHALLDL 361
Query: 157 MQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKK 216
M +G P + I++ + + K EA VF + + L P+ + +I + K
Sbjct: 362 MVRNGIHPDHHVFNILICAYAKQEKVDEAMLVFSKM---RQHGLNPNVVTYGAVIGILCK 418
Query: 217 AGGYEKARKLFALMAERGVQQSTVTYNSL---MSFETNYKEVSKIYDQMQRAGLQPDVVS 273
+G + A F M + G+ + + Y SL + + + ++ +M G+ + +
Sbjct: 419 SGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHSLCIFDKWDKAEELILEMLDRGICLNTIF 478
Query: 274 YALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMR 333
+ +I+++ K R E+ +F+ M+ GV+P Y+ L+D + ++G +D+A + M
Sbjct: 479 FNSIIHSHCKEGRVIESEKLFDLMVRIGVKPNVITYSTLIDGYCLAGKMDEATKLLSSMF 538
Query: 334 RDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLE 393
PD +Y T+++ Y S M+ A F+ + G PN+ITY +++G
Sbjct: 539 SVGMKPDCVTYNTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTA 598
Query: 394 KMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILL 453
E+Y + +G + + + I+ KN D A+ ++ + + + NI++
Sbjct: 599 AAKELYVGITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMI 658
Query: 454 SLAKTADERNEANELLGNFNHPNNEPGINGLSI 486
+EA +L + P + S+
Sbjct: 659 GALLKVGRNDEAKDLFAALSANGLVPDVRTYSL 691
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 88/346 (25%), Positives = 150/346 (43%), Gaps = 33/346 (9%)
Query: 101 MLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNA-EAIFRRMQS 159
+LI + G + L + KKG+ ++ T L++ R +A + + RRM
Sbjct: 92 ILIGCCCRAGRLDLGFAALGNVVKKGFRVEAITFTPLLKGLCADKRTSDAMDIVLRRMTE 151
Query: 160 SGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGG 219
P + I+LK + N+ +EA E+ + D+ PD + +I + K G
Sbjct: 152 LSCMPDVFSCTILLKGLCDENRSQEALELLHMMADDRGGGSAPDVVSYTTVINGFFKEGD 211
Query: 220 YEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSKIYDQMQRAGLQPDVVSYALLIN 279
+KA Y++ Y +M + PDVV+Y+ +I
Sbjct: 212 SDKA------------------YST--------------YHEMLDRRISPDVVTYSSIIA 239
Query: 280 AYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSP 339
A K + ++A+ V M+ GV P YN +L + S +A K MR D P
Sbjct: 240 ALCKGQAMDKAMEVLTTMVKNGVMPNCMTYNSILHGYCSSEQPKEAIGFLKKMRSDGVEP 299
Query: 340 DICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIY 399
D+ +Y +++ A K F + + G P++ TY TL++GYA L +M +
Sbjct: 300 DVVTYNSLMDYLCKNGRSTEARKIFDSMTKRGLEPDIATYCTLLQGYATKGALVEMHALL 359
Query: 400 DKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPD 445
D M NGI P+ +F ++ AY K + D A++ + +M G P+
Sbjct: 360 DLMVRNGIHPDHHVFNILICAYAKQEKVDEAMLVFSKMRQHGLNPN 405
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 95/392 (24%), Positives = 177/392 (45%), Gaps = 41/392 (10%)
Query: 99 FLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQ 158
F +LI AY KQ ++A V S M + G P+VV++ A++ + G +A F +M
Sbjct: 374 FNILICAYAKQEKVDEAMLVFSKMRQHGLNPNVVTYGAVIGILCKSGSVDDAMLYFEQMI 433
Query: 159 SSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAG 218
G P+ + Y ++ +K+ +AEE+ + +LD + + F+ +I+ + K G
Sbjct: 434 DEGLTPNIIVYTSLIHSLCIFDKWDKAEELILEMLDR---GICLNTIFFNSIIHSHCKEG 490
Query: 219 GYEKARKLFALMAERGVQQSTVTYNSLM---SFETNYKEVSKIYDQMQRAGLQPDVVSYA 275
++ KLF LM GV+ + +TY++L+ E +K+ M G++PD V+Y
Sbjct: 491 RVIESEKLFDLMVRIGVKPNVITYSTLIDGYCLAGKMDEATKLLSSMFSVGMKPDCVTYN 550
Query: 276 LLINAYGKARREEEALAVFEEMLDAGVRPT------------H----------------- 306
LIN Y + R ++ALA+F+EM+ +GV P H
Sbjct: 551 TLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVGITKS 610
Query: 307 ------KAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGA 360
YNI+L + + D+A +F+ + + ++ M+ A + + A
Sbjct: 611 GTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEA 670
Query: 361 EKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDA 420
+ F L +G VP+V TY + + + LE++ +++ M NG N + +I+
Sbjct: 671 KDLFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGCTANSRMLNSIVRK 730
Query: 421 YGKNKDFDSAVVWYKEMESCGFPPDQKAKNIL 452
+ D A + ++ F + ++L
Sbjct: 731 LLQRGDITRAGTYLSMIDEKHFSLEASTASLL 762
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 73/305 (23%), Positives = 126/305 (41%), Gaps = 44/305 (14%)
Query: 221 EKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSKI--YDQMQRAG---LQPDVVSYA 275
E AR +F + RG S N ++ + + + Y++M RAG + P V +Y
Sbjct: 32 EDARHVFEELLRRGRGASIYGLNRALADVARHSPAAAVSRYNRMARAGAGKVTPTVHTYG 91
Query: 276 LLINAYGKARREEEALAVFEEMLDAGVRP-----------------THKAYNILL----- 313
+LI +A R + A ++ G R T A +I+L
Sbjct: 92 ILIGCCCRAGRLDLGFAALGNVVKKGFRVEAITFTPLLKGLCADKRTSDAMDIVLRRMTE 151
Query: 314 -----DAFAIS----GMVDQART-----VFKCMRRDR---CSPDICSYTTMLSAYVNASD 356
D F+ + G+ D+ R+ + M DR +PD+ SYTT+++ + D
Sbjct: 152 LSCMPDVFSCTILLKGLCDENRSQEALELLHMMADDRGGGSAPDVVSYTTVINGFFKEGD 211
Query: 357 MEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTT 416
+ A + + P+V+TY ++I K ++K ME+ M NG+ PN + +
Sbjct: 212 SDKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEVLTTMVKNGVMPNCMTYNS 271
Query: 417 IMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPN 476
I+ Y ++ A+ + K+M S G PD N L+ EA ++ +
Sbjct: 272 ILHGYCSSEQPKEAIGFLKKMRSDGVEPDVVTYNSLMDYLCKNGRSTEARKIFDSMTKRG 331
Query: 477 NEPGI 481
EP I
Sbjct: 332 LEPDI 336
>gi|297801450|ref|XP_002868609.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297314445|gb|EFH44868.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 526
Score = 145 bits (366), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 88/364 (24%), Positives = 172/364 (47%), Gaps = 11/364 (3%)
Query: 97 MDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRR 156
+DF L+ K F+ + + G + + + LM + + + A + +
Sbjct: 72 IDFTRLLNVIAKMKKFDVVINLCKHLQIMGVSNDLYTCNLLMNCFCQSSQPCLASSFLGK 131
Query: 157 MQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEE-KSPLKPDQKMFHMMIYMYK 215
+ G P T+ ++ F N+ +EA M+++++ + +KPD ++ +I
Sbjct: 132 LMKLGFEPDIFTFTSLINGFCLGNRIEEA----MSMVNQMVEMGIKPDVVIYTTIIDSLC 187
Query: 216 KAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETN---YKEVSKIYDQMQRAGLQPDVV 272
K G + A LF M G++ V Y SL++ N +++ + M + ++PDV+
Sbjct: 188 KNGHVDNALSLFNQMENYGIRPDVVMYTSLVNGLCNSGRWRDADLLLRGMMKRKIKPDVI 247
Query: 273 SYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCM 332
++ LI+A+ K + +A ++ EM+ + P Y L++ + G +D+AR +F M
Sbjct: 248 TFNALIDAFVKEGKLLDAKELYNEMIQMSIAPNIFTYTSLINGLCMEGRLDEARQMFYLM 307
Query: 333 RRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNL 392
C PD+ +YT++++ + +E A K F + Q G N ITY TLI+G+ V
Sbjct: 308 ETKGCFPDVVAYTSLINGFCKCKKVEDAMKIFYEMSQKGLTGNTITYTTLIQGFGLVGKP 367
Query: 393 EKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEM---ESCGFPPDQKAK 449
E++ M G+ PN + ++ N + A++ +++M E G PP+ +
Sbjct: 368 NVAQEVFGHMVSRGVPPNIRTYNVLLHCLCYNGKVNKALMIFEDMQKREIDGVPPNIRTY 427
Query: 450 NILL 453
N+LL
Sbjct: 428 NVLL 431
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 79/300 (26%), Positives = 147/300 (49%), Gaps = 12/300 (4%)
Query: 113 NKAEKVLSFMNKK---GYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTY 169
N+ E+ +S +N+ G P VV +T ++++ + G NA ++F +M++ G RP + Y
Sbjct: 155 NRIEEAMSMVNQMVEMGIKPDVVIYTTIIDSLCKNGHVDNALSLFNQMENYGIRPDVVMY 214
Query: 170 QIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFAL 229
++ + ++++A+ + ++ K +KPD F+ +I + K G A++L+
Sbjct: 215 TSLVNGLCNSGRWRDADLLLRGMM---KRKIKPDVITFNALIDAFVKEGKLLDAKELYNE 271
Query: 230 MAERGVQQSTVTYNSL---MSFETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARR 286
M + + + TY SL + E E +++ M+ G PDVV+Y LIN + K ++
Sbjct: 272 MIQMSIAPNIFTYTSLINGLCMEGRLDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKK 331
Query: 287 EEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTT 346
E+A+ +F EM G+ Y L+ F + G + A+ VF M P+I +Y
Sbjct: 332 VEDAMKIFYEMSQKGLTGNTITYTTLIQGFGLVGKPNVAQEVFGHMVSRGVPPNIRTYNV 391
Query: 347 MLSAYVNASDMEGAEKFFRRLKQ---DGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMR 403
+L + A F +++ DG PN+ TY L+ G LEK + ++ M+
Sbjct: 392 LLHCLCYNGKVNKALMIFEDMQKREIDGVPPNIRTYNVLLHGLCYNGKLEKALMVFGDMQ 451
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 84/347 (24%), Positives = 155/347 (44%), Gaps = 44/347 (12%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
+I + K G + A + + M G P VV +T+L+ GR+++A+ + R M
Sbjct: 182 IIDSLCKNGHVDNALSLFNQMENYGIRPDVVMYTSLVNGLCNSGRWRDADLLLRGMMKRK 241
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
+P +T+ ++ FV+ K +A+E++ ++ + + P+ + +I G +
Sbjct: 242 IKPDVITFNALIDAFVKEGKLLDAKELYNEMI---QMSIAPNIFTYTSLINGLCMEGRLD 298
Query: 222 KARKLFALMAERGVQQSTVTYNSLMSFETNYKEVS---KIYDQMQRAGLQPDVVSYALLI 278
+AR++F LM +G V Y SL++ K+V KI+ +M + GL + ++Y LI
Sbjct: 299 EARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVEDAMKIFYEMSQKGLTGNTITYTTLI 358
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRR---D 335
+G + A VF M+ GV P + YN+LL +G V++A +F+ M++ D
Sbjct: 359 QGFGLVGKPNVAQEVFGHMVSRGVPPNIRTYNVLLHCLCYNGKVNKALMIFEDMQKREID 418
Query: 336 RCSPDICSYTTMLSAYV-----------------------------------NASDMEGA 360
P+I +Y +L A ++ A
Sbjct: 419 GVPPNIRTYNVLLHGLCYNGKLEKALMVFGDMQKRDMDIGIITYTIIIQGMCKAGKVKDA 478
Query: 361 EKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGI 407
F L G PNV+TY T+I G + + + ++ KM+ +G+
Sbjct: 479 LNLFCSLPSKGVKPNVVTYTTMISGLFREGLMLEAHVLFRKMKEDGV 525
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 73/340 (21%), Positives = 150/340 (44%), Gaps = 8/340 (2%)
Query: 146 RYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDE-EKSPLKPDQ 204
++ A +F M S P PS + + +L + + KF +V + L + + D
Sbjct: 51 QFNEALDLFSHMVESRPLPSIIDFTRLLNVIAKMKKF----DVVINLCKHLQIMGVSNDL 106
Query: 205 KMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLM---SFETNYKEVSKIYDQ 261
++++ + ++ A + + G + T+ SL+ +E + +Q
Sbjct: 107 YTCNLLMNCFCQSSQPCLASSFLGKLMKLGFEPDIFTFTSLINGFCLGNRIEEAMSMVNQ 166
Query: 262 MQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGM 321
M G++PDVV Y +I++ K + AL++F +M + G+RP Y L++ SG
Sbjct: 167 MVEMGIKPDVVIYTTIIDSLCKNGHVDNALSLFNQMENYGIRPDVVMYTSLVNGLCNSGR 226
Query: 322 VDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGT 381
A + + M + + PD+ ++ ++ A+V + A++ + + Q PN+ TY +
Sbjct: 227 WRDADLLLRGMMKRKIKPDVITFNALIDAFVKEGKLLDAKELYNEMIQMSIAPNIFTYTS 286
Query: 382 LIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCG 441
LI G L++ +++ M G P+ +T++++ + K K + A+ + EM G
Sbjct: 287 LINGLCMEGRLDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVEDAMKIFYEMSQKG 346
Query: 442 FPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGI 481
+ L+ + N A E+ G+ P I
Sbjct: 347 LTGNTITYTTLIQGFGLVGKPNVAQEVFGHMVSRGVPPNI 386
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 69/283 (24%), Positives = 121/283 (42%), Gaps = 44/283 (15%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + LI +G ++A ++ M KG P VV++T+L+ + + + ++A IF
Sbjct: 280 NIFTYTSLINGLCMEGRLDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVEDAMKIF 339
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
M G + +TY +++ F K A+EVF
Sbjct: 340 YEMSQKGLTGNTITYTTLIQGFGLVGKPNVAQEVF------------------------- 374
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSK---IYDQMQRA---GLQ 268
G+ M RGV + TYN L+ +V+K I++ MQ+ G+
Sbjct: 375 ----GH---------MVSRGVPPNIRTYNVLLHCLCYNGKVNKALMIFEDMQKREIDGVP 421
Query: 269 PDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTV 328
P++ +Y +L++ + E+AL VF +M + Y I++ +G V A +
Sbjct: 422 PNIRTYNVLLHGLCYNGKLEKALMVFGDMQKRDMDIGIITYTIIIQGMCKAGKVKDALNL 481
Query: 329 FKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDG 371
F + P++ +YTTM+S M A FR++K+DG
Sbjct: 482 FCSLPSKGVKPNVVTYTTMISGLFREGLMLEAHVLFRKMKEDG 524
>gi|255661194|gb|ACU25766.1| pentatricopeptide repeat-containing protein [Neosparton
ephedroides]
Length = 426
Score = 145 bits (366), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 96/377 (25%), Positives = 182/377 (48%), Gaps = 39/377 (10%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
LI K D++KA + S + + G+AP +V++ +++ + + ++ A ++ M+++G
Sbjct: 50 LIELSRKLCDYSKAISIFSRLKRSGFAPDLVAYNSMINVFXKAKLFREARSLINEMRTAG 109
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
P ++Y +L + VE +F EA VF + E K L D ++MI +Y + G +
Sbjct: 110 VMPDTVSYTTLLTMHVENKRFLEALSVFAEM-REIKCLL--DLTTCNIMIDVYGQLGMAK 166
Query: 222 KARKLFALMAERGVQQSTVTYNSLMSFETN---YKEVSKIYDQMQRAGLQPDVVSYALLI 278
+A KLF M + G++ + V+YN+L+ + + E ++ MQR ++ +VV+Y ++
Sbjct: 167 EADKLFWGMRKIGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMM 226
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCS 338
YGK E+A + +EM + G+ P Y+ ++ + G +D+A +F+ +R
Sbjct: 227 MIYGKTLEHEKANNLIQEMQNRGIEPNSITYSTIISIWVKVGKLDRAAMLFQKLRNSGVE 286
Query: 339 PDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVP------------------------ 374
D Y TM+ AY A + A++ LK+ +P
Sbjct: 287 IDQVLYQTMIVAYERAGLVAHAKRLLHELKRPDNIPRDTAIHILAAAGRLEEATWVFRQA 346
Query: 375 -------NVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDF 427
++ + LI ++K ++E++DKMR P+ + +++AYGK +F
Sbjct: 347 IDAGEVKDITVFERLIHLFSKYKKYSNVVEVFDKMRERRYFPDSNVIALVLNAYGKLHEF 406
Query: 428 DSAVVWYKEM--ESCGF 442
+ A Y EM E C F
Sbjct: 407 EKANSVYMEMQDEGCIF 423
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 85/326 (26%), Positives = 156/326 (47%), Gaps = 6/326 (1%)
Query: 164 PSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKA 223
P TY ++ F + F +A ++ +++++ P D ++ +I + +K Y KA
Sbjct: 7 PDRYTYSTLITHFGKEGLF-DAALSWLQKMEQDRVP--GDLVLYSNLIELSRKLCDYSKA 63
Query: 224 RKLFALMAERGVQQSTVTYNSLMSFETN---YKEVSKIYDQMQRAGLQPDVVSYALLINA 280
+F+ + G V YNS+++ ++E + ++M+ AG+ PD VSY L+
Sbjct: 64 ISIFSRLKRSGFAPDLVAYNSMINVFXKAKLFREARSLINEMRTAGVMPDTVSYTTLLTM 123
Query: 281 YGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPD 340
+ + +R EAL+VF EM + NI++D + GM +A +F MR+ P+
Sbjct: 124 HVENKRFLEALSVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKIGIEPN 183
Query: 341 ICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYD 400
+ SY T+L Y +A A FR +++ NV+TY +++ Y K EK +
Sbjct: 184 VVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLIQ 243
Query: 401 KMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTAD 460
+M+ GI+PN ++TI+ + K D A + ++++ + G DQ ++ + A
Sbjct: 244 EMQNRGIEPNSITYSTIISIWVKVGKLDRAAMLFQKLRNSGVEIDQVLYQTMIVAYERAG 303
Query: 461 ERNEANELLGNFNHPNNEPGINGLSI 486
A LL P+N P + I
Sbjct: 304 LVAHAKRLLHELKRPDNIPRDTAIHI 329
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 78/332 (23%), Positives = 161/332 (48%), Gaps = 6/332 (1%)
Query: 124 KKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFK 183
++ +P +++ L+ +G+ G + A + ++M+ + Y +++L + +
Sbjct: 2 ERALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDYS 61
Query: 184 EAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYN 243
+A +F L ++S PD ++ MI ++ KA + +AR L M GV TV+Y
Sbjct: 62 KAISIFSRL---KRSGFAPDLVAYNSMINVFXKAKLFREARSLINEMRTAGVMPDTVSYT 118
Query: 244 SLMSFETNYK---EVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDA 300
+L++ K E ++ +M+ D+ + ++I+ YG+ +EA +F M
Sbjct: 119 TLLTMHVENKRFLEALSVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKI 178
Query: 301 GVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGA 360
G+ P +YN LL + + + +A +F+ M+R ++ +Y +M+ Y + E A
Sbjct: 179 GIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKA 238
Query: 361 EKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDA 420
+ ++ G PN ITY T+I + KV L++ ++ K+R +G++ +Q ++ T++ A
Sbjct: 239 NNLIQEMQNRGIEPNSITYSTIISIWVKVGKLDRAAMLFQKLRNSGVEIDQVLYQTMIVA 298
Query: 421 YGKNKDFDSAVVWYKEMESCGFPPDQKAKNIL 452
Y + A E++ P A +IL
Sbjct: 299 YERAGLVAHAKRLLHELKRPDNIPRDTAIHIL 330
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/244 (22%), Positives = 119/244 (48%), Gaps = 6/244 (2%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + + L+ YG F +A + M +K +VV++ ++M YG+ ++ A +
Sbjct: 183 NVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLI 242
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
+ MQ+ G P+++TY I+ ++V+ K A +F L S ++ DQ ++ MI Y
Sbjct: 243 QEMQNRGIEPNSITYSTIISIWVKVGKLDRAAMLFQKL---RNSGVEIDQVLYQTMIVAY 299
Query: 215 KKAGGYEKARKLFA-LMAERGVQQSTVTYNSLMSFETNYKEVSKIYDQMQRAGLQPDVVS 273
++AG A++L L + + T + +++ +E + ++ Q AG D+
Sbjct: 300 ERAGLVAHAKRLLHELKRPDNIPRDTAIH--ILAAAGRLEEATWVFRQAIDAGEVKDITV 357
Query: 274 YALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMR 333
+ LI+ + K ++ + VF++M + P ++L+A+ ++A +V+ M+
Sbjct: 358 FERLIHLFSKYKKYSNVVEVFDKMRERRYFPDSNVIALVLNAYGKLHEFEKANSVYMEMQ 417
Query: 334 RDRC 337
+ C
Sbjct: 418 DEGC 421
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 67/276 (24%), Positives = 124/276 (44%), Gaps = 10/276 (3%)
Query: 101 MLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSS 160
++I YG+ G +A+K+ M K G P+VVS+ L+ YG + A +FR MQ
Sbjct: 154 IMIDVYGQLGMAKEADKLFWGMRKIGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRK 213
Query: 161 GPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGY 220
+ +TY ++ ++ K E E+ + + + ++P+ + +I ++ K G
Sbjct: 214 NIEQNVVTYNSMMMIY---GKTLEHEKANNLIQEMQNRGIEPNSITYSTIISIWVKVGKL 270
Query: 221 EKARKLFALMAERGVQQSTVTYNSLM-SFETN--YKEVSKIYDQMQRAGLQPDVVSYALL 277
++A LF + GV+ V Y +++ ++E ++ +++R PD +
Sbjct: 271 DRAAMLFQKLRNSGVEIDQVLYQTMIVAYERAGLVAHAKRLLHELKR----PDNIPRDTA 326
Query: 278 INAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRC 337
I+ A R EEA VF + +DAG + L+ F+ VF MR R
Sbjct: 327 IHILAAAGRLEEATWVFRQAIDAGEVKDITVFERLIHLFSKYKKYSNVVEVFDKMRERRY 386
Query: 338 SPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFV 373
PD +L+AY + E A + ++ +G +
Sbjct: 387 FPDSNVIALVLNAYGKLHEFEKANSVYMEMQDEGCI 422
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 81/181 (44%)
Query: 301 GVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGA 360
+ P Y+ L+ F G+ D A + + M +DR D+ Y+ ++ D A
Sbjct: 4 ALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDYSKA 63
Query: 361 EKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDA 420
F RLK+ GF P+++ Y ++I + K + + ++MR G+ P+ +TT++
Sbjct: 64 ISIFSRLKRSGFAPDLVAYNSMINVFXKAKLFREARSLINEMRTAGVMPDTVSYTTLLTM 123
Query: 421 YGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPG 480
+ +NK F A+ + EM D NI++ + EA++L EP
Sbjct: 124 HVENKRFLEALSVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKIGIEPN 183
Query: 481 I 481
+
Sbjct: 184 V 184
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/123 (22%), Positives = 63/123 (51%)
Query: 333 RRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNL 392
R SPD +Y+T+++ + + A + ++++QD +++ Y LI+ K+ +
Sbjct: 1 RERALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDY 60
Query: 393 EKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNIL 452
K + I+ +++ +G P+ + ++++ + K K F A EM + G PD + L
Sbjct: 61 SKAISIFSRLKRSGFAPDLVAYNSMINVFXKAKLFREARSLINEMRTAGVMPDTVSYTTL 120
Query: 453 LSL 455
L++
Sbjct: 121 LTM 123
>gi|15236546|ref|NP_194913.1| proton gradient regulation 3 [Arabidopsis thaliana]
gi|75213543|sp|Q9SZ52.1|PP344_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g31850, chloroplastic; AltName: Full=Protein PROTON
GRADIENT REGULATION 3; Flags: Precursor
gi|4584524|emb|CAB40755.1| putative protein [Arabidopsis thaliana]
gi|7270088|emb|CAB79903.1| putative protein [Arabidopsis thaliana]
gi|332660567|gb|AEE85967.1| proton gradient regulation 3 [Arabidopsis thaliana]
Length = 1112
Score = 145 bits (365), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 93/378 (24%), Positives = 179/378 (47%), Gaps = 6/378 (1%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N F + I G+ G N+A ++L M+ +G P VV++T L++A + A+ +F
Sbjct: 257 NVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVF 316
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
+M++ +P +TY +L F + ++ + + EK PD F +++
Sbjct: 317 EKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEM---EKDGHVPDVVTFTILVDAL 373
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVS---KIYDQMQRAGLQPDV 271
KAG + +A +M ++G+ + TYN+L+ + +++ M+ G++P
Sbjct: 374 CKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTA 433
Query: 272 VSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKC 331
+Y + I+ YGK+ AL FE+M G+ P A N L + A +G +A+ +F
Sbjct: 434 YTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYG 493
Query: 332 MRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNN 391
++ PD +Y M+ Y +++ A K + ++G P+VI +LI K +
Sbjct: 494 LKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADR 553
Query: 392 LEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNI 451
+++ +++ +M+ +KP + T++ GKN A+ ++ M G PP+ N
Sbjct: 554 VDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNT 613
Query: 452 LLSLAKTADERNEANELL 469
L DE A ++L
Sbjct: 614 LFDCLCKNDEVTLALKML 631
Score = 132 bits (331), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 101/372 (27%), Positives = 167/372 (44%), Gaps = 37/372 (9%)
Query: 99 FLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQ 158
+L + + +G +A L M + G+ + S+ L+ + A ++RRM
Sbjct: 156 YLTIFKSLSVKGGLKQAPYALRKMREFGFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRMI 215
Query: 159 SSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAG 218
G RPS TY L V K ++ + V L + E LKP+ F + I + +AG
Sbjct: 216 LEGFRPSLQTYS---SLMVGLGKRRDIDSVMGLLKEMETLGLKPNVYTFTICIRVLGRAG 272
Query: 219 GYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSKIYDQMQRAGLQPDVVSYALLI 278
E +I +M G PDVV+Y +LI
Sbjct: 273 --------------------------------KINEAYEILKRMDDEGCGPDVVTYTVLI 300
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCS 338
+A AR+ + A VFE+M +P Y LLD F+ + +D + + M +D
Sbjct: 301 DALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHV 360
Query: 339 PDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEI 398
PD+ ++T ++ A A + A ++ G +PN+ TY TLI G +V+ L+ +E+
Sbjct: 361 PDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALEL 420
Query: 399 YDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNI-LLSLAK 457
+ M G+KP + +D YGK+ D SA+ +++M++ G P+ A N L SLAK
Sbjct: 421 FGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAK 480
Query: 458 TADERNEANELL 469
+R EA ++
Sbjct: 481 AGRDR-EAKQIF 491
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 84/330 (25%), Positives = 159/330 (48%), Gaps = 8/330 (2%)
Query: 121 FMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEAN 180
F G P + ++ L+ + A+ +F +++S+G P TY +L + ++
Sbjct: 775 FTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSG 834
Query: 181 KFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFA-LMAERGVQQST 239
K E E++ + E + + +++I KAG + A L+ LM++R +
Sbjct: 835 KIDELFELYKEMSTHE---CEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTA 891
Query: 240 VTYNSL---MSFETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEE 296
TY L +S E ++++ M G +P+ Y +LIN +GKA + A A+F+
Sbjct: 892 CTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKR 951
Query: 297 MLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASD 356
M+ GVRP K Y++L+D + G VD+ FK ++ +PD+ Y +++ +
Sbjct: 952 MVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHR 1011
Query: 357 MEGAEKFFRRLKQD-GFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFT 415
+E A F +K G P++ TY +LI +E+ +IY++++ G++PN F
Sbjct: 1012 LEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFN 1071
Query: 416 TIMDAYGKNKDFDSAVVWYKEMESCGFPPD 445
++ Y + + A Y+ M + GF P+
Sbjct: 1072 ALIRGYSLSGKPEHAYAVYQTMVTGGFSPN 1101
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 105/445 (23%), Positives = 203/445 (45%), Gaps = 12/445 (2%)
Query: 33 RLMNQIEEVGSAVAVLRSERTRGQPLPKDLVLGTLV--RLKQLKKWNVVSEVLEWLRIQS 90
R++ + ++ A +L+ R + D+V T++ L +K + EV E ++
Sbjct: 266 RVLGRAGKINEAYEILK--RMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGR 323
Query: 91 WWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNA 150
+ + ++ L+ + D + ++ S M K G+ P VV+ T L++A + G + A
Sbjct: 324 HKP-DRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEA 382
Query: 151 EAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMM 210
M+ G P+ TY ++ + ++ +A E+F + E +KP + +
Sbjct: 383 FDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNM---ESLGVKPTAYTYIVF 439
Query: 211 IYMYKKAGGYEKARKLFALMAERGVQQSTVTYN-SLMSFETNYK--EVSKIYDQMQRAGL 267
I Y K+G A + F M +G+ + V N SL S + E +I+ ++ GL
Sbjct: 440 IDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGL 499
Query: 268 QPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQART 327
PD V+Y +++ Y K +EA+ + EM++ G P N L++ + VD+A
Sbjct: 500 VPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWK 559
Query: 328 VFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYA 387
+F M+ + P + +Y T+L+ ++ A + F + Q G PN IT+ TL
Sbjct: 560 MFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLC 619
Query: 388 KVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQK 447
K + + +++ KM G P+ + TI+ KN A+ ++ +M+ +P
Sbjct: 620 KNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMKKLVYPDFVT 679
Query: 448 AKNILLSLAKTADERNEANELLGNF 472
+L + K A +A +++ NF
Sbjct: 680 LCTLLPGVVK-ASLIEDAYKIITNF 703
Score = 129 bits (323), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 80/310 (25%), Positives = 153/310 (49%), Gaps = 9/310 (2%)
Query: 150 AEAIFRRMQSS-GPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFH 208
A +F + G +P TY +++ +EA+ + A++VF+ + + + PD ++
Sbjct: 768 ARTLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQV---KSTGCIPDVATYN 824
Query: 209 MMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSKI----YDQMQR 264
++ Y K+G ++ +L+ M+ + +T+T+N ++S V YD M
Sbjct: 825 FLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYYDLMSD 884
Query: 265 AGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQ 324
P +Y LI+ K+ R EA +FE MLD G RP YNIL++ F +G D
Sbjct: 885 RDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADA 944
Query: 325 ARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIK 384
A +FK M ++ PD+ +Y+ ++ ++ +F+ LK+ G P+V+ Y +I
Sbjct: 945 ACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIIN 1004
Query: 385 GYAKVNNLEKMMEIYDKMRVN-GIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFP 443
G K + LE+ + ++++M+ + GI P+ + +++ G + A Y E++ G
Sbjct: 1005 GLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLE 1064
Query: 444 PDQKAKNILL 453
P+ N L+
Sbjct: 1065 PNVFTFNALI 1074
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 72/304 (23%), Positives = 150/304 (49%), Gaps = 6/304 (1%)
Query: 115 AEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILK 174
A+ V + G P V ++ L++AYG+ G+ +++ M + + +T+ I++
Sbjct: 804 AQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVIS 863
Query: 175 LFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERG 234
V+A +A +++ L+ + P + +I K+G +A++LF M + G
Sbjct: 864 GLVKAGNVDDALDLYYDLMSDRD--FSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYG 921
Query: 235 VQQSTVTYNSLMSFETNYKEV---SKIYDQMQRAGLQPDVVSYALLINAYGKARREEEAL 291
+ + YN L++ E ++ +M + G++PD+ +Y++L++ R +E L
Sbjct: 922 CRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGL 981
Query: 292 AVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDR-CSPDICSYTTMLSA 350
F+E+ ++G+ P YN++++ S +++A +F M+ R +PD+ +Y +++
Sbjct: 982 HYFKELKESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILN 1041
Query: 351 YVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPN 410
A +E A K + +++ G PNV T+ LI+GY+ E +Y M G PN
Sbjct: 1042 LGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTMVTGGFSPN 1101
Query: 411 QTIF 414
+
Sbjct: 1102 TGTY 1105
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 76/283 (26%), Positives = 144/283 (50%), Gaps = 8/283 (2%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
L+ AYGK G ++ ++ M+ + ++H ++ + G +A ++ + S
Sbjct: 826 LLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDR 885
Query: 162 P-RPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGY 220
P+A TY ++ ++ + EA+++F +LD +P+ +++++I + KAG
Sbjct: 886 DFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLD---YGCRPNCAIYNILINGFGKAGEA 942
Query: 221 EKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSK---IYDQMQRAGLQPDVVSYALL 277
+ A LF M + GV+ TY+ L+ V + + +++ +GL PDVV Y L+
Sbjct: 943 DAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLI 1002
Query: 278 INAYGKARREEEALAVFEEMLDA-GVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDR 336
IN GK+ R EEAL +F EM + G+ P YN L+ I+GMV++A ++ ++R
Sbjct: 1003 INGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAG 1062
Query: 337 CSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITY 379
P++ ++ ++ Y + E A ++ + GF PN TY
Sbjct: 1063 LEPNVFTFNALIRGYSLSGKPEHAYAVYQTMVTGGFSPNTGTY 1105
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 100/454 (22%), Positives = 182/454 (40%), Gaps = 45/454 (9%)
Query: 70 LKQLKKWNVVSEVLEWLR--IQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGY 127
L L K + E +E +Q N + F L K + A K+L M G
Sbjct: 580 LAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGC 639
Query: 128 APSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEE 187
P V ++ ++ + G+ K A F +M+ P +T +L V+A+ ++A +
Sbjct: 640 VPDVFTYNTIIFGLVKNGQVKEAMCFFHQMKKL-VYPDFVTLCTLLPGVVKASLIEDAYK 698
Query: 188 VFMTLL----DEEKSPLKPD------------------------------QKMFHMMIYM 213
+ L D+ + D + +I
Sbjct: 699 IITNFLYNCADQPANLFWEDLIGSILAEAGIDNAVSFSERLVANGICRDGDSILVPIIRY 758
Query: 214 YKKAGGYEKARKLF-ALMAERGVQQSTVTYNSLMS--FETNYKEVSK-IYDQMQRAGLQP 269
K AR LF + GVQ TYN L+ E + E+++ ++ Q++ G P
Sbjct: 759 SCKHNNVSGARTLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIP 818
Query: 270 DVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVF 329
DV +Y L++AYGK+ + +E +++EM +NI++ +G VD A ++
Sbjct: 819 DVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLY 878
Query: 330 KCMRRDR-CSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAK 388
+ DR SP C+Y ++ + + A++ F + G PN Y LI G+ K
Sbjct: 879 YDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGK 938
Query: 389 VNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKA 448
+ ++ +M G++P+ ++ ++D D + ++KE++ G PD
Sbjct: 939 AGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVC 998
Query: 449 KNILLSLAKTADERNEANELLGNFNHPNNEPGIN 482
N++++ + EA L FN GI
Sbjct: 999 YNLIINGLGKSHRLEEALVL---FNEMKTSRGIT 1029
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 68/287 (23%), Positives = 131/287 (45%), Gaps = 3/287 (1%)
Query: 196 EKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYK-- 253
+K +K D + + GG ++A M E G + +YN L+ +
Sbjct: 145 QKRIIKRDTNTYLTIFKSLSVKGGLKQAPYALRKMREFGFVLNAYSYNGLIHLLLKSRFC 204
Query: 254 -EVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNIL 312
E ++Y +M G +P + +Y+ L+ GK R + + + +EM G++P + I
Sbjct: 205 TEAMEVYRRMILEGFRPSLQTYSSLMVGLGKRRDIDSVMGLLKEMETLGLKPNVYTFTIC 264
Query: 313 LDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGF 372
+ +G +++A + K M + C PD+ +YT ++ A A ++ A++ F ++K
Sbjct: 265 IRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRH 324
Query: 373 VPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVV 432
P+ +TY TL+ ++ +L+ + + + +M +G P+ FT ++DA K +F A
Sbjct: 325 KPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFD 384
Query: 433 WYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEP 479
M G P+ N L+ ++A EL GN +P
Sbjct: 385 TLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKP 431
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/252 (23%), Positives = 108/252 (42%), Gaps = 35/252 (13%)
Query: 253 KEVSKIYDQMQRAGLQPDVVSY--------------------------ALLINAYG---- 282
+E++ ++D MQ+ ++ D +Y ++NAY
Sbjct: 135 EEMAYVFDLMQKRIIKRDTNTYLTIFKSLSVKGGLKQAPYALRKMREFGFVLNAYSYNGL 194
Query: 283 -----KARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRC 337
K+R EA+ V+ M+ G RP+ + Y+ L+ +D + K M
Sbjct: 195 IHLLLKSRFCTEAMEVYRRMILEGFRPSLQTYSSLMVGLGKRRDIDSVMGLLKEMETLGL 254
Query: 338 SPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMME 397
P++ ++T + A + A + +R+ +G P+V+TY LI L+ E
Sbjct: 255 KPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKE 314
Query: 398 IYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAK 457
+++KM+ KP++ + T++D + N+D DS ++ EME G PD IL+
Sbjct: 315 VFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALC 374
Query: 458 TADERNEANELL 469
A EA + L
Sbjct: 375 KAGNFGEAFDTL 386
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 90/185 (48%)
Query: 305 THKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFF 364
T + N +L+A + G +++ VF M++ D +Y T+ + ++ A
Sbjct: 117 TTETCNYMLEALRVDGKLEEMAYVFDLMQKRIIKRDTNTYLTIFKSLSVKGGLKQAPYAL 176
Query: 365 RRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKN 424
R++++ GFV N +Y LI K + ME+Y +M + G +P+ ++++M GK
Sbjct: 177 RKMREFGFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTYSSLMVGLGKR 236
Query: 425 KDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGINGL 484
+D DS + KEME+ G P+ I + + A + NEA E+L + P +
Sbjct: 237 RDIDSVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTY 296
Query: 485 SISVD 489
++ +D
Sbjct: 297 TVLID 301
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/192 (23%), Positives = 85/192 (44%)
Query: 288 EEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTM 347
EE VF+ M ++ Y + + ++ G + QA + MR + SY +
Sbjct: 135 EEMAYVFDLMQKRIIKRDTNTYLTIFKSLSVKGGLKQAPYALRKMREFGFVLNAYSYNGL 194
Query: 348 LSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGI 407
+ + + A + +RR+ +GF P++ TY +L+ G K +++ +M + +M G+
Sbjct: 195 IHLLLKSRFCTEAMEVYRRMILEGFRPSLQTYSSLMVGLGKRRDIDSVMGLLKEMETLGL 254
Query: 408 KPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANE 467
KPN FT + G+ + A K M+ G PD +L+ TA + + A E
Sbjct: 255 KPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKE 314
Query: 468 LLGNFNHPNNEP 479
+ ++P
Sbjct: 315 VFEKMKTGRHKP 326
>gi|242092708|ref|XP_002436844.1| hypothetical protein SORBIDRAFT_10g009870 [Sorghum bicolor]
gi|241915067|gb|EER88211.1| hypothetical protein SORBIDRAFT_10g009870 [Sorghum bicolor]
Length = 755
Score = 145 bits (365), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 102/464 (21%), Positives = 203/464 (43%), Gaps = 23/464 (4%)
Query: 22 AADEAGKKNWRRLMNQIEEVGSAVAVLR------------SERTRGQPLPKDLVLGTLVR 69
A A + + +L+ + G + A R S + +++G R
Sbjct: 43 CARPASVRAFNQLLTVVSRAGCSSASERVVSLFTRMARECSSKVAPNACTYSILIGCFCR 102
Query: 70 LKQLKKWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSF-MNKKGYA 128
+ +L+ ++ +++ W N + L+ ++A +L M++ G
Sbjct: 103 MGRLEHGFAAFGLI----LKTGWRVNVIVISQLLKGLCDAKRVDEATDILLLRMSEFGCP 158
Query: 129 PSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEV 188
P VV++ ++ + R G+ + A +F M G P+ +TY ++ +A A+ V
Sbjct: 159 PDVVAYNTVINGFFREGQVEKAYNLFLEMMDQGIPPNVVTYTTVIDGLCKAQVVDRAKGV 218
Query: 189 FMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSF 248
F ++D +KPD ++ +I+ Y G +++ ++ M+ G++ +TY L+ +
Sbjct: 219 FQQMIDR---GVKPDNGTYNCLIHGYLSTGKWKEVVQMLEEMSTHGLEPDCITYALLLDY 275
Query: 249 ETN---YKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPT 305
+E +D M R G++PDV YA+L++ Y E + + M+ GV P
Sbjct: 276 LCKNGRCREARLFFDSMFRKGIKPDVAIYAILLHGYATKGALSEMHSFLDLMVGNGVSPN 335
Query: 306 HKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFR 365
+ +NI+ A+A M+++A +F MR+ SPD+ S+ ++ A ++ A F
Sbjct: 336 RRIFNIMFCAYAKKAMIEEAMHIFNKMRQQGLSPDVVSFGALIDALCKLGRVDDAVLQFN 395
Query: 366 RLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNK 425
++ +G PN+ + +L+ G V EK E++ ++ GI + F T+M
Sbjct: 396 QMINEGVTPNIFVFSSLVYGLCTVGKWEKAEELFFEVLDQGICVDAVFFNTLMCNLCNEG 455
Query: 426 DFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELL 469
A M G P+ + N L++ +EA +LL
Sbjct: 456 RVMEAQRLIDLMIRVGVRPNVISYNTLVAGHCLTGRIDEAAKLL 499
Score = 142 bits (357), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 97/365 (26%), Positives = 174/365 (47%), Gaps = 12/365 (3%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N F ++ AY K+ +A + + M ++G +P VVS AL++A + GR +A F
Sbjct: 335 NRRIFNIMFCAYAKKAMIEEAMHIFNKMRQQGLSPDVVSFGALIDALCKLGRVDDAVLQF 394
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
+M + G P+ + ++ K+++AEE+F +LD+ + D F+ ++
Sbjct: 395 NQMINEGVTPNIFVFSSLVYGLCTVGKWEKAEELFFEVLDQ---GICVDAVFFNTLMCNL 451
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSLMS---FETNYKEVSKIYDQMQRAGLQPDV 271
G +A++L LM GV+ + ++YN+L++ E +K+ D M GL+P+
Sbjct: 452 CNEGRVMEAQRLIDLMIRVGVRPNVISYNTLVAGHCLTGRIDEAAKLLDVMVSNGLKPNE 511
Query: 272 VSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKC 331
+Y +L+ Y KARR ++A ++F EML GV P YN +L +G +A ++
Sbjct: 512 FTYTILLRGYCKARRVDDAYSLFREMLMKGVTPVVATYNTILHGLFQTGRFSEANELYLN 571
Query: 332 MRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNN 391
M R DI +Y +L+ + ++ A K FRRL + +T+ +I K
Sbjct: 572 MINSRTKCDIYTYNIILNGLCKNNFVDEAFKMFRRLCSKDPQLDSVTFNIMIGALLKGGR 631
Query: 392 LEKMMEIYDKMRVNGIKPNQTIFTTIMDAY---GKNKDFDSAVVWYKEMESCGFPPDQKA 448
E M+++ + G+ P+ + I + G +FD + ME G P+
Sbjct: 632 KEDAMDLFATISAYGLVPDVVTYRLIAENLIEEGSLGEFDG---LFSAMEKSGTAPNSHM 688
Query: 449 KNILL 453
N L+
Sbjct: 689 LNALV 693
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 99/406 (24%), Positives = 174/406 (42%), Gaps = 49/406 (12%)
Query: 81 EVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKG------YAPSVVSH 134
E+L R S FN+ L+T + G + +E+V+S + AP+ ++
Sbjct: 39 ELLHCARPASVRAFNQ-----LLTVVSRAGCSSASERVVSLFTRMARECSSKVAPNACTY 93
Query: 135 TALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLD 194
+ L+ + R GR ++ A F + +G R + + +LK +A + EA ++ + +
Sbjct: 94 SILIGCFCRMGRLEHGFAAFGLILKTGWRVNVIVISQLLKGLCDAKRVDEATDILLLRMS 153
Query: 195 EEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKE 254
E P PD ++ +I + + G EKA YN
Sbjct: 154 EFGCP--PDVVAYNTVINGFFREGQVEKA------------------YN----------- 182
Query: 255 VSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLD 314
++ +M G+ P+VV+Y +I+ KA+ + A VF++M+D GV+P + YN L+
Sbjct: 183 ---LFLEMMDQGIPPNVVTYTTVIDGLCKAQVVDRAKGVFQQMIDRGVKPDNGTYNCLIH 239
Query: 315 AFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVP 374
+ +G + + + M PD +Y +L A FF + + G P
Sbjct: 240 GYLSTGKWKEVVQMLEEMSTHGLEPDCITYALLLDYLCKNGRCREARLFFDSMFRKGIKP 299
Query: 375 NVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWY 434
+V Y L+ GYA L +M D M NG+ PN+ IF + AY K + A+ +
Sbjct: 300 DVAIYAILLHGYATKGALSEMHSFLDLMVGNGVSPNRRIFNIMFCAYAKKAMIEEAMHIF 359
Query: 435 KEMESCGFPPDQKAKNILL----SLAKTADERNEANELLGNFNHPN 476
+M G PD + L+ L + D + N+++ PN
Sbjct: 360 NKMRQQGLSPDVVSFGALIDALCKLGRVDDAVLQFNQMINEGVTPN 405
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 88/410 (21%), Positives = 167/410 (40%), Gaps = 41/410 (10%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
LI Y G + + ++L M+ G P +++ L++ + GR + A F M G
Sbjct: 237 LIHGYLSTGKWKEVVQMLEEMSTHGLEPDCITYALLLDYLCKNGRCREARLFFDSMFRKG 296
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
+P Y I+L + E F+ L+ + + P++++F++M Y K E
Sbjct: 297 IKPDVAIYAILLHGYATKGALSEMHS-FLDLM--VGNGVSPNRRIFNIMFCAYAKKAMIE 353
Query: 222 KARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSKI---YDQMQRAGLQPDVVSYALLI 278
+A +F M ++G+ V++ +L+ V ++QM G+ P++ ++ L+
Sbjct: 354 EAMHIFNKMRQQGLSPDVVSFGALIDALCKLGRVDDAVLQFNQMINEGVTPNIFVFSSLV 413
Query: 279 NAYGKARREEEALAVFEEMLD-----------------------------------AGVR 303
+ E+A +F E+LD GVR
Sbjct: 414 YGLCTVGKWEKAEELFFEVLDQGICVDAVFFNTLMCNLCNEGRVMEAQRLIDLMIRVGVR 473
Query: 304 PTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKF 363
P +YN L+ ++G +D+A + M + P+ +YT +L Y A ++ A
Sbjct: 474 PNVISYNTLVAGHCLTGRIDEAAKLLDVMVSNGLKPNEFTYTILLRGYCKARRVDDAYSL 533
Query: 364 FRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGK 423
FR + G P V TY T++ G + + E+Y M + K + + I++ K
Sbjct: 534 FREMLMKGVTPVVATYNTILHGLFQTGRFSEANELYLNMINSRTKCDIYTYNIILNGLCK 593
Query: 424 NKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFN 473
N D A ++ + S D NI++ + +A +L +
Sbjct: 594 NNFVDEAFKMFRRLCSKDPQLDSVTFNIMIGALLKGGRKEDAMDLFATIS 643
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 48/234 (20%), Positives = 92/234 (39%), Gaps = 42/234 (17%)
Query: 288 EEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRR------DRCSPDI 341
+EAL +F+E+L + +A+N LL + +G + V R + +P+
Sbjct: 31 DEALKLFDELLHCARPASVRAFNQLLTVVSRAGCSSASERVVSLFTRMARECSSKVAPNA 90
Query: 342 CSYTTMLSAYVNASDM------------------------------------EGAEKFFR 365
C+Y+ ++ + + E +
Sbjct: 91 CTYSILIGCFCRMGRLEHGFAAFGLILKTGWRVNVIVISQLLKGLCDAKRVDEATDILLL 150
Query: 366 RLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNK 425
R+ + G P+V+ Y T+I G+ + +EK ++ +M GI PN +TT++D K +
Sbjct: 151 RMSEFGCPPDVVAYNTVINGFFREGQVEKAYNLFLEMMDQGIPPNVVTYTTVIDGLCKAQ 210
Query: 426 DFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEP 479
D A +++M G PD N L+ + + E ++L + EP
Sbjct: 211 VVDRAKGVFQQMIDRGVKPDNGTYNCLIHGYLSTGKWKEVVQMLEEMSTHGLEP 264
>gi|302785473|ref|XP_002974508.1| hypothetical protein SELMODRAFT_101075 [Selaginella moellendorffii]
gi|300158106|gb|EFJ24730.1| hypothetical protein SELMODRAFT_101075 [Selaginella moellendorffii]
Length = 567
Score = 145 bits (365), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 90/366 (24%), Positives = 170/366 (46%), Gaps = 9/366 (2%)
Query: 126 GYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEA 185
GY +V ++ L+ R R+ A A+F+ M +P A T+ I+L+ +N+ ++A
Sbjct: 2 GYEHNVFTYNKLLLQLTREHRHDKASAVFQEMIDKSCQPDAFTFAILLRGLCRSNQLEKA 61
Query: 186 EEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSL 245
++ + ++ PD +++ +I Y KA + +A K A M + + VTY ++
Sbjct: 62 RKLLGRM---KEMGCVPDDAIYNALISGYSKAKDFGQAFKFLAEMVKNHCLPTVVTYTNI 118
Query: 246 ---MSFETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGV 302
+ ++ K+ D+M+ G P++ +Y +++ + R+ +EA + EEM G
Sbjct: 119 VDGLCKAERTRDAVKLLDEMRDKGCSPNIYTYNVIVEGLCEERKLDEAKKMLEEMAVRGY 178
Query: 303 RPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEK 362
P YN + VD+AR K + R +PD+ SYTT+++ + D++ A +
Sbjct: 179 FPDVVTYNSFIKGLCKCDRVDEAR---KFLARMPVTPDVVSYTTVINGLCKSGDLDSASR 235
Query: 363 FFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYG 422
+ G P+V+TY +LI G+ K +E+ M + D M G +PN + +++ A
Sbjct: 236 MLDHMSNRGCTPDVVTYSSLIDGFCKGGEVERAMGLLDSMLKLGCRPNMVAYNSLLGALH 295
Query: 423 KNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGIN 482
+ A EME GF PD + N + A+ +A + P +
Sbjct: 296 RLGHIGKAEDMLVEMERRGFTPDVVSYNACIDGLCKAERVKKAKAVFDRMVERGCTPNAS 355
Query: 483 GLSISV 488
S+ +
Sbjct: 356 SYSMLI 361
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 92/363 (25%), Positives = 155/363 (42%), Gaps = 49/363 (13%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
LI+ Y K DF +A K L+ M K P+VV++T +++ + R ++A + M+ G
Sbjct: 83 LISGYSKAKDFGQAFKFLAEMVKNHCLPTVVTYTNIVDGLCKAERTRDAVKLLDEMRDKG 142
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
P+ TY +I++ E K EA
Sbjct: 143 CSPNIYTYNVIVEGLCEERKLDEA------------------------------------ 166
Query: 222 KARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSKIYDQMQRAGLQPDVVSYALLINAY 281
+K+ MA RG VTYNS + V + + R + PDVVSY +IN
Sbjct: 167 --KKMLEEMAVRGYFPDVVTYNSFIKGLCKCDRVDEARKFLARMPVTPDVVSYTTVINGL 224
Query: 282 GKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDI 341
K+ + A + + M + G P Y+ L+D F G V++A + M + C P++
Sbjct: 225 CKSGDLDSASRMLDHMSNRGCTPDVVTYSSLIDGFCKGGEVERAMGLLDSMLKLGCRPNM 284
Query: 342 CSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDK 401
+Y ++L A + AE +++ GF P+V++Y I G K ++K ++D+
Sbjct: 285 VAYNSLLGALHRLGHIGKAEDMLVEMERRGFTPDVVSYNACIDGLCKAERVKKAKAVFDR 344
Query: 402 MRVNGIKPNQT----------IFTTIMDAYGKNKDFDSAVVWY-KEMESCGFPPDQKAKN 450
M G PN + ++T ++D K FD A + K ++ PD N
Sbjct: 345 MVERGCTPNASSYSMLIVDILLYTVLLDGLCKGGRFDEACALFSKVLDEKICEPDVFFYN 404
Query: 451 ILL 453
++L
Sbjct: 405 VML 407
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 87/385 (22%), Positives = 174/385 (45%), Gaps = 30/385 (7%)
Query: 70 LKQLKKWNVVSEVLEWL-RIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYA 128
+K L K + V E ++L R+ D + + +I K GD + A ++L M+ +G
Sbjct: 189 IKGLCKCDRVDEARKFLARMPVTPDV--VSYTTVINGLCKSGDLDSASRMLDHMSNRGCT 246
Query: 129 PSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEV 188
P VV++++L++ + +GG + A + M G RP+ + Y +L +AE++
Sbjct: 247 PDVVTYSSLIDGFCKGGEVERAMGLLDSMLKLGCRPNMVAYNSLLGALHRLGHIGKAEDM 306
Query: 189 FMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSF 248
L++ E+ PD ++ I KA +KA+ +F M ERG + +Y+ L+
Sbjct: 307 ---LVEMERRGFTPDVVSYNACIDGLCKAERVKKAKAVFDRMVERGCTPNASSYSMLIV- 362
Query: 249 ETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGV-RPTHK 307
D++ Y +L++ K R +EA A+F ++LD + P
Sbjct: 363 ---------------------DILLYTVLLDGLCKGGRFDEACALFSKVLDEKICEPDVF 401
Query: 308 AYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRL 367
YN++LD+ +D+A + K M C ++ ++ ++ + AE +
Sbjct: 402 FYNVMLDSHCKRRQIDKALQIHKQMLEKNCC-NVVTWNILVHGLCVDDRLSDAETMLLTM 460
Query: 368 KQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDF 427
+GF+P+ +TYGTL+ K +E++++ G P+ ++ ++
Sbjct: 461 VDEGFIPDFVTYGTLVDAMCKCGKSAAALELFEEAVKGGCVPDVVTYSALITGLVHENMA 520
Query: 428 DSAVVWYKEMESCGFPPDQKAKNIL 452
+ A + + ++ + PD K +L
Sbjct: 521 EEAYLLFTKLVERRWVPDDKTLGLL 545
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 90/369 (24%), Positives = 163/369 (44%), Gaps = 23/369 (6%)
Query: 101 MLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSS 160
+++ ++ ++A+K+L M +GY P VV++ + ++ + R A RM +
Sbjct: 152 VIVEGLCEERKLDEAKKMLEEMAVRGYFPDVVTYNSFIKGLCKCDRVDEARKFLARMPVT 211
Query: 161 GPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDE-EKSPLKPDQKMFHMMIYMYKKAGG 219
P ++Y ++ ++ A +LD PD + +I + K G
Sbjct: 212 ---PDVVSYTTVINGLCKSGDLDSASR----MLDHMSNRGCTPDVVTYSSLIDGFCKGGE 264
Query: 220 YEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSKIYD---QMQRAGLQPDVVSYAL 276
E+A L M + G + + V YNSL+ + K D +M+R G PDVVSY
Sbjct: 265 VERAMGLLDSMLKLGCRPNMVAYNSLLGALHRLGHIGKAEDMLVEMERRGFTPDVVSYNA 324
Query: 277 LINAYGKARREEEALAVFEEMLDAGVRPTHKAYN----------ILLDAFAISGMVDQAR 326
I+ KA R ++A AVF+ M++ G P +Y+ +LLD G D+A
Sbjct: 325 CIDGLCKAERVKKAKAVFDRMVERGCTPNASSYSMLIVDILLYTVLLDGLCKGGRFDEAC 384
Query: 327 TVF-KCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKG 385
+F K + C PD+ Y ML ++ ++ A + +++ + NV+T+ L+ G
Sbjct: 385 ALFSKVLDEKICEPDVFFYNVMLDSHCKRRQIDKALQIHKQMLEKNCC-NVVTWNILVHG 443
Query: 386 YAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPD 445
+ L + M G P+ + T++DA K +A+ ++E G PD
Sbjct: 444 LCVDDRLSDAETMLLTMVDEGFIPDFVTYGTLVDAMCKCGKSAAALELFEEAVKGGCVPD 503
Query: 446 QKAKNILLS 454
+ L++
Sbjct: 504 VVTYSALIT 512
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 78/332 (23%), Positives = 146/332 (43%), Gaps = 9/332 (2%)
Query: 161 GPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGY 220
G + TY +L ++ +A VF ++D+ +PD F +++ ++
Sbjct: 2 GYEHNVFTYNKLLLQLTREHRHDKASAVFQEMIDKS---CQPDAFTFAILLRGLCRSNQL 58
Query: 221 EKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVS---KIYDQMQRAGLQPDVVSYALL 277
EKARKL M E G YN+L+S + K+ K +M + P VV+Y +
Sbjct: 59 EKARKLLGRMKEMGCVPDDAIYNALISGYSKAKDFGQAFKFLAEMVKNHCLPTVVTYTNI 118
Query: 278 INAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRC 337
++ KA R +A+ + +EM D G P YN++++ +D+A+ + + M
Sbjct: 119 VDGLCKAERTRDAVKLLDEMRDKGCSPNIYTYNVIVEGLCEERKLDEAKKMLEEMAVRGY 178
Query: 338 SPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMME 397
PD+ +Y + + ++ A KF R+ P+V++Y T+I G K +L+
Sbjct: 179 FPDVVTYNSFIKGLCKCDRVDEARKFLARMP---VTPDVVSYTTVINGLCKSGDLDSASR 235
Query: 398 IYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAK 457
+ D M G P+ +++++D + K + + A+ M G P+ A N LL
Sbjct: 236 MLDHMSNRGCTPDVVTYSSLIDGFCKGGEVERAMGLLDSMLKLGCRPNMVAYNSLLGALH 295
Query: 458 TADERNEANELLGNFNHPNNEPGINGLSISVD 489
+A ++L P + + +D
Sbjct: 296 RLGHIGKAEDMLVEMERRGFTPDVVSYNACID 327
>gi|224123734|ref|XP_002330195.1| predicted protein [Populus trichocarpa]
gi|222871651|gb|EEF08782.1| predicted protein [Populus trichocarpa]
Length = 529
Score = 145 bits (365), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 92/371 (24%), Positives = 177/371 (47%), Gaps = 9/371 (2%)
Query: 88 IQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAY---GRG 144
I+ + N + F +++ K G N+A V+ M G +P+V+++ L++ Y GR
Sbjct: 147 IKRKIELNVISFNIVVNGLCKVGKLNRAGDVIEDMKVWGVSPNVITYNTLIDGYCKMGRI 206
Query: 145 GRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQ 204
G+ A+AI + M + G P+ +TY I++ F + A VF + ++ L+P+
Sbjct: 207 GKMYKADAILKEMVAKGICPNEVTYNILIDGFCKDENVSGAMRVFGEM---QRQGLRPNV 263
Query: 205 KMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSK---IYDQ 261
++++I G ++A L M ++ + VT+N L++ K V++ +++
Sbjct: 264 VTYNILINGLCSDGKVDEAVALRDQMVSSDLEPNVVTHNVLINGFCKNKTVNEAINLFND 323
Query: 262 MQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGM 321
M++ G+ P+ ++Y LI+AY K R E+A A++ M+D G+ P YN L+ G
Sbjct: 324 MEKQGVDPNAMTYTTLIDAYCKDGRMEDAFALYNMMIDRGIFPEVSTYNCLIAGLCRKGD 383
Query: 322 VDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGT 381
V AR++ M + S D+ +Y ++ + + A K + + G P+ +TY T
Sbjct: 384 VKAARSLMNEMVSKKLSADVVTYNILIDSLCKKGESRKAVKLLDEMFEKGLNPSHVTYNT 443
Query: 382 LIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCG 441
L+ GY + NL + + +M G + N ++ + + A EM G
Sbjct: 444 LMDGYCREGNLRAALIVRTRMERKGKQANVVTHNVLIKGFCLKGRLEDANGLLNEMLERG 503
Query: 442 FPPDQKAKNIL 452
P++ I+
Sbjct: 504 LVPNRTTYEII 514
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/247 (23%), Positives = 113/247 (45%), Gaps = 16/247 (6%)
Query: 245 LMSFETNYKEVSKIYDQMQRAG--LQPDVVSYALLINAYGKARREEEALAVFEEMLDAGV 302
+ +E +Y VS I+ + +G + + +L+ A+ + + F+ D G
Sbjct: 58 FVKYEKDY-SVSAIFHAISMSGDSFCVNSILADMLVLAFVRNLKILRGFEAFKRAGDYGF 116
Query: 303 RPTHKAYNILLDAFAISGMVDQART-----VFKCMRRDRCSPDICSYTTMLSAYVNASDM 357
+ + + N LL SG+V ++ V++ M + + ++ S+ +++ +
Sbjct: 117 KLSLISCNPLL-----SGLVKESENGDMEFVYREMIKRKIELNVISFNIVVNGLCKVGKL 171
Query: 358 EGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMME---IYDKMRVNGIKPNQTIF 414
A +K G PNVITY TLI GY K+ + KM + I +M GI PN+ +
Sbjct: 172 NRAGDVIEDMKVWGVSPNVITYNTLIDGYCKMGRIGKMYKADAILKEMVAKGICPNEVTY 231
Query: 415 TTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNH 474
++D + K+++ A+ + EM+ G P+ NIL++ + + +EA L
Sbjct: 232 NILIDGFCKDENVSGAMRVFGEMQRQGLRPNVVTYNILINGLCSDGKVDEAVALRDQMVS 291
Query: 475 PNNEPGI 481
+ EP +
Sbjct: 292 SDLEPNV 298
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 39/162 (24%), Positives = 70/162 (43%), Gaps = 3/162 (1%)
Query: 341 ICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYD 400
+ S +LS V S+ E +R + + NVI++ ++ G KV L + ++ +
Sbjct: 120 LISCNPLLSGLVKESENGDMEFVYREMIKRKIELNVISFNIVVNGLCKVGKLNRAGDVIE 179
Query: 401 KMRVNGIKPNQTIFTTIMDAY---GKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAK 457
M+V G+ PN + T++D Y G+ A KEM + G P++ NIL+
Sbjct: 180 DMKVWGVSPNVITYNTLIDGYCKMGRIGKMYKADAILKEMVAKGICPNEVTYNILIDGFC 239
Query: 458 TADERNEANELLGNFNHPNNEPGINGLSISVDEEDDDDDDDE 499
+ + A + G P + +I ++ D DE
Sbjct: 240 KDENVSGAMRVFGEMQRQGLRPNVVTYNILINGLCSDGKVDE 281
>gi|302818229|ref|XP_002990788.1| hypothetical protein SELMODRAFT_132337 [Selaginella moellendorffii]
gi|300141349|gb|EFJ08061.1| hypothetical protein SELMODRAFT_132337 [Selaginella moellendorffii]
Length = 624
Score = 145 bits (365), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 99/359 (27%), Positives = 169/359 (47%), Gaps = 16/359 (4%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
LI+ Y K DF +A K L+ M K P+VV++T +++ + GR K+A + M+ G
Sbjct: 51 LISGYSKAKDFGQAFKFLAEMVKNHCLPTVVTYTNIVDGLCKAGRTKDAVKLLDEMRDKG 110
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLK---PDQKMFHMMIYMYKKAG 218
P+ TY +I++ E K EA+++ E+ ++ PD ++ I K
Sbjct: 111 CSPNIYTYNVIVEGLCEERKLDEAKKML------EEMAVRGYFPDVVTYNSFIKGLCKCD 164
Query: 219 GYEKARKLFALMAERGVQQSTVTYNSL---MSFETNYKEVSKIYDQMQRAGLQPDVVSYA 275
++ARK A M V V+Y ++ + + S++ DQM G PDVV+Y+
Sbjct: 165 RVDEARKFLARMP---VTPDVVSYTTVINGLCKSGDLDSASRMLDQMTNRGCTPDVVTYS 221
Query: 276 LLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRD 335
LI+ + K E A+ + + ML G RP AYN LL A G + +A + M R
Sbjct: 222 SLIDGFCKGGEVERAMGLLDSMLKLGCRPNMVAYNSLLGALHRLGHIGKAEDMLVEMERR 281
Query: 336 RCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKM 395
+PD+ SY + A ++ A+ F R+ + G PN +Y L++ K L+
Sbjct: 282 GFTPDVVSYNACIDGLCKAERVKKAKAVFDRMVERGCTPNASSYSMLVEELCKKKELDDA 341
Query: 396 MEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWY-KEMESCGFPPDQKAKNILL 453
+ + ++ R + ++T ++D K FD A + K ++ PD N++L
Sbjct: 342 ITLVEQAREKYQIVDILLYTVLLDGLCKGGRFDEACALFSKVLDEKICEPDVFFYNVML 400
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 84/337 (24%), Positives = 157/337 (46%), Gaps = 9/337 (2%)
Query: 157 MQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKK 216
M +P A T+ I+L+ +N+ ++A ++ + ++ PD +++ +I Y K
Sbjct: 1 MIDKSCQPDAFTFAILLRGLCRSNQLEKARQLLGRM---KEMGCVPDDAIYNALISGYSK 57
Query: 217 AGGYEKARKLFALMAERGVQQSTVTYNSL---MSFETNYKEVSKIYDQMQRAGLQPDVVS 273
A + +A K A M + + VTY ++ + K+ K+ D+M+ G P++ +
Sbjct: 58 AKDFGQAFKFLAEMVKNHCLPTVVTYTNIVDGLCKAGRTKDAVKLLDEMRDKGCSPNIYT 117
Query: 274 YALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMR 333
Y +++ + R+ +EA + EEM G P YN + VD+AR K +
Sbjct: 118 YNVIVEGLCEERKLDEAKKMLEEMAVRGYFPDVVTYNSFIKGLCKCDRVDEAR---KFLA 174
Query: 334 RDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLE 393
R +PD+ SYTT+++ + D++ A + ++ G P+V+TY +LI G+ K +E
Sbjct: 175 RMPVTPDVVSYTTVINGLCKSGDLDSASRMLDQMTNRGCTPDVVTYSSLIDGFCKGGEVE 234
Query: 394 KMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILL 453
+ M + D M G +PN + +++ A + A EME GF PD + N +
Sbjct: 235 RAMGLLDSMLKLGCRPNMVAYNSLLGALHRLGHIGKAEDMLVEMERRGFTPDVVSYNACI 294
Query: 454 SLAKTADERNEANELLGNFNHPNNEPGINGLSISVDE 490
A+ +A + P + S+ V+E
Sbjct: 295 DGLCKAERVKKAKAVFDRMVERGCTPNASSYSMLVEE 331
Score = 125 bits (315), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 85/354 (24%), Positives = 168/354 (47%), Gaps = 11/354 (3%)
Query: 70 LKQLKKWNVVSEVLEWL-RIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYA 128
+K L K + V E ++L R+ D + + +I K GD + A ++L M +G
Sbjct: 157 IKGLCKCDRVDEARKFLARMPVTPDV--VSYTTVINGLCKSGDLDSASRMLDQMTNRGCT 214
Query: 129 PSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEV 188
P VV++++L++ + +GG + A + M G RP+ + Y +L +AE++
Sbjct: 215 PDVVTYSSLIDGFCKGGEVERAMGLLDSMLKLGCRPNMVAYNSLLGALHRLGHIGKAEDM 274
Query: 189 FMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSF 248
L++ E+ PD ++ I KA +KA+ +F M ERG + +Y+ L+
Sbjct: 275 ---LVEMERRGFTPDVVSYNACIDGLCKAERVKKAKAVFDRMVERGCTPNASSYSMLVEE 331
Query: 249 ETNYKEVS---KIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGV-RP 304
KE+ + +Q + D++ Y +L++ K R +EA A+F ++LD + P
Sbjct: 332 LCKKKELDDAITLVEQAREKYQIVDILLYTVLLDGLCKGGRFDEACALFSKVLDEKICEP 391
Query: 305 THKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFF 364
YN++LD+ +D+A + K M C ++ ++ ++ + AE
Sbjct: 392 DVFFYNVMLDSHCKRRQIDKALQIHKQMLERNCC-NVVTWNILVHGLCVDDRLSDAETML 450
Query: 365 RRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIM 418
+ +GF+P+ +TYGTL+ K +E++++ G P+ ++ ++
Sbjct: 451 LTMVDEGFIPDFVTYGTLVDAMCKCGKSAAALELFEEAVKGGCVPDVVTYSALI 504
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 91/368 (24%), Positives = 153/368 (41%), Gaps = 49/368 (13%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
L+ A + G KAE +L M ++G+ P VVS+ A ++ + R K A+A+F RM G
Sbjct: 258 LLGALHRLGHIGKAEDMLVEMERRGFTPDVVSYNACIDGLCKAERVKKAKAVFDRMVERG 317
Query: 162 PRPSA-----------------------------------LTYQIILKLFVEANKFKEAE 186
P+A L Y ++L + +F EA
Sbjct: 318 CTPNASSYSMLVEELCKKKELDDAITLVEQAREKYQIVDILLYTVLLDGLCKGGRFDEAC 377
Query: 187 EVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSL- 245
+F +LDE+ +PD +++M+ + K +KA ++ M ER + VT+N L
Sbjct: 378 ALFSKVLDEKIC--EPDVFFYNVMLDSHCKRRQIDKALQIHKQMLERNC-CNVVTWNILV 434
Query: 246 --MSFETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVR 303
+ + + + M G PD V+Y L++A K + AL +FEE + G
Sbjct: 435 HGLCVDDRLSDAETMLLTMVDEGFIPDFVTYGTLVDAMCKCGKSAAALELFEEAVKGGCV 494
Query: 304 PTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKF 363
P Y+ L+ M ++A +F D+ + M+ Y + K
Sbjct: 495 PDVVTYSALITGLVHENMAEEAYLLFT-------KLDVALWNAMILGYAENGSGDLGLKL 547
Query: 364 FRRLKQDGFVPNVITYGTLIKG-YAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYG 422
F L + PN T+G I G K +L K ++D+ G P+ + T++D +
Sbjct: 548 FVELIESDVEPNARTFGKEISGKLVKAESLGKARGLFDRAVKGGFFPDLFVANTLIDVFA 607
Query: 423 KNKDFDSA 430
K D + A
Sbjct: 608 KCGDLEEA 615
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 90/394 (22%), Positives = 164/394 (41%), Gaps = 48/394 (12%)
Query: 101 MLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSS 160
+++ ++ ++A+K+L M +GY P VV++ + ++ + R A RM +
Sbjct: 120 VIVEGLCEERKLDEAKKMLEEMAVRGYFPDVVTYNSFIKGLCKCDRVDEARKFLARMPVT 179
Query: 161 GPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDE-EKSPLKPDQKMFHMMIYMYKKAGG 219
P ++Y ++ ++ A +LD+ PD + +I + K G
Sbjct: 180 ---PDVVSYTTVINGLCKSGDLDSASR----MLDQMTNRGCTPDVVTYSSLIDGFCKGGE 232
Query: 220 YEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSKIYD---QMQRAGLQPDVVSYAL 276
E+A L M + G + + V YNSL+ + K D +M+R G PDVVSY
Sbjct: 233 VERAMGLLDSMLKLGCRPNMVAYNSLLGALHRLGHIGKAEDMLVEMERRGFTPDVVSYNA 292
Query: 277 LINAYGKARREEEALAVFEEMLDAGVRPTHKAYN-------------------------- 310
I+ KA R ++A AVF+ M++ G P +Y+
Sbjct: 293 CIDGLCKAERVKKAKAVFDRMVERGCTPNASSYSMLVEELCKKKELDDAITLVEQAREKY 352
Query: 311 ---------ILLDAFAISGMVDQARTVF-KCMRRDRCSPDICSYTTMLSAYVNASDMEGA 360
+LLD G D+A +F K + C PD+ Y ML ++ ++ A
Sbjct: 353 QIVDILLYTVLLDGLCKGGRFDEACALFSKVLDEKICEPDVFFYNVMLDSHCKRRQIDKA 412
Query: 361 EKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDA 420
+ +++ + NV+T+ L+ G + L + M G P+ + T++DA
Sbjct: 413 LQIHKQMLERN-CCNVVTWNILVHGLCVDDRLSDAETMLLTMVDEGFIPDFVTYGTLVDA 471
Query: 421 YGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLS 454
K +A+ ++E G PD + L++
Sbjct: 472 MCKCGKSAAALELFEEAVKGGCVPDVVTYSALIT 505
Score = 105 bits (261), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 78/353 (22%), Positives = 142/353 (40%), Gaps = 44/353 (12%)
Query: 122 MNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANK 181
M K P + L+ R + + A + RM+ G P Y ++ + +A
Sbjct: 1 MIDKSCQPDAFTFAILLRGLCRSNQLEKARQLLGRMKEMGCVPDDAIYNALISGYSKAKD 60
Query: 182 FKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVT 241
F +A F L + K+ P + ++ KAG + A KL M ++G + T
Sbjct: 61 FGQA---FKFLAEMVKNHCLPTVVTYTNIVDGLCKAGRTKDAVKLLDEMRDKGCSPNIYT 117
Query: 242 YNSL---MSFETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEML 298
YN + + E E K+ ++M G PDVV+Y I K R +EA M
Sbjct: 118 YNVIVEGLCEERKLDEAKKMLEEMAVRGYFPDVVTYNSFIKGLCKCDRVDEARKFLARM- 176
Query: 299 DAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDME 358
V P +Y +++ SG +D A + M C+PD+ +Y++++ + ++E
Sbjct: 177 --PVTPDVVSYTTVINGLCKSGDLDSASRMLDQMTNRGCTPDVVTYSSLIDGFCKGGEVE 234
Query: 359 -----------------------------------GAEKFFRRLKQDGFVPNVITYGTLI 383
AE +++ GF P+V++Y I
Sbjct: 235 RAMGLLDSMLKLGCRPNMVAYNSLLGALHRLGHIGKAEDMLVEMERRGFTPDVVSYNACI 294
Query: 384 KGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKE 436
G K ++K ++D+M G PN + ++ +++ K K+ D A+ ++
Sbjct: 295 DGLCKAERVKKAKAVFDRMVERGCTPNASSYSMLVEELCKKKELDDAITLVEQ 347
>gi|255556466|ref|XP_002519267.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223541582|gb|EEF43131.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 665
Score = 145 bits (365), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 95/358 (26%), Positives = 173/358 (48%), Gaps = 11/358 (3%)
Query: 99 FLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQ 158
F+ +I Y + G +A K+ + + G P+V + L++A R++ E I+ M+
Sbjct: 117 FINVINTYRRVGLAEQALKMFYRIREFGCQPTVKIYNHLLDAMLSENRFQMIEPIYSNMK 176
Query: 159 SSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAG 218
G P+ TY I+LK + N+ A ++ L++ +PD + +I K G
Sbjct: 177 RDGKEPNVYTYNILLKALCKNNRVDGACKL---LVEMSNKGCEPDVVSYTTVISSMSKLG 233
Query: 219 GYEKARKLFALMAERGVQQSTVTYNSLM---SFETNYKEVSKIYDQMQRAGLQPDVVSYA 275
E+AR+L Q + YN+L+ E KEV + QM G+ P+V++Y+
Sbjct: 234 KVEEAREL-----SIRFQPNVSVYNALINGFCREYKVKEVFLLLGQMVEKGIDPNVITYS 288
Query: 276 LLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRD 335
+I++ E ALAV+ +M G P + L+ + + G V +A ++ M +
Sbjct: 289 TVISSLSGIGNVELALAVWAKMFVRGCSPNVYTFTSLMKGYFMRGRVLEALNIWNRMAEE 348
Query: 336 RCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKM 395
P++ +Y T++ + M A +++++G PNV TYG LI G+AK +L
Sbjct: 349 GFEPNVVAYNTLIHGLCSHGKMGEAVSVSSKMERNGCSPNVSTYGALIDGFAKAGDLVGA 408
Query: 396 MEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILL 453
EI++KM NG PN ++T++++ ++ F A ++M + PP+ N +
Sbjct: 409 SEIWNKMMTNGCIPNVVVYTSMVNVLCRSSMFSQAWSLIEKMSTDNCPPNTVTFNTFI 466
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 98/379 (25%), Positives = 165/379 (43%), Gaps = 11/379 (2%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + +L+ A K + A K+L M+ KG P VVS+T ++ + + G+ + A +
Sbjct: 183 NVYTYNILLKALCKNNRVDGACKLLVEMSNKGCEPDVVSYTTVISSMSKLGKVEEARELS 242
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
R Q P+ Y ++ F K KE VF+ L + + P+ + +I
Sbjct: 243 IRFQ-----PNVSVYNALINGFCREYKVKE---VFLLLGQMVEKGIDPNVITYSTVISSL 294
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSLMS---FETNYKEVSKIYDQMQRAGLQPDV 271
G E A ++A M RG + T+ SLM E I+++M G +P+V
Sbjct: 295 SGIGNVELALAVWAKMFVRGCSPNVYTFTSLMKGYFMRGRVLEALNIWNRMAEEGFEPNV 354
Query: 272 VSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKC 331
V+Y LI+ + EA++V +M G P Y L+D FA +G + A ++
Sbjct: 355 VAYNTLIHGLCSHGKMGEAVSVSSKMERNGCSPNVSTYGALIDGFAKAGDLVGASEIWNK 414
Query: 332 MRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNN 391
M + C P++ YT+M++ +S A ++ D PN +T+ T IKG
Sbjct: 415 MMTNGCIPNVVVYTSMVNVLCRSSMFSQAWSLIEKMSTDNCPPNTVTFNTFIKGLCCSGR 474
Query: 392 LEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNI 451
+E + ++ +M G PN + ++D K A+ EME G + N
Sbjct: 475 VECAINLFCQMEQYGCSPNIKTYNEVLDGLLKENRIKEALELVTEMEEKGMELNLVTYNT 534
Query: 452 LLSLAKTADERNEANELLG 470
+ + EA +LLG
Sbjct: 535 IFGGFCNVGKFEEALKLLG 553
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 81/353 (22%), Positives = 170/353 (48%), Gaps = 6/353 (1%)
Query: 92 WDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAE 151
+ ++ + ++I G++ D + + +L M +G + S ++ Y R G + A
Sbjct: 75 FQHTQLTYQIMIEKLGRECDVDGVQYLLQQMKLEGISCSEDLFINVINTYRRVGLAEQAL 134
Query: 152 AIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMI 211
+F R++ G +P+ Y +L + N+F+ E ++ + + K +P+ +++++
Sbjct: 135 KMFYRIREFGCQPTVKIYNHLLDAMLSENRFQMIEPIYSNMKRDGK---EPNVYTYNILL 191
Query: 212 YMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSKIYDQMQRAGLQPDV 271
K + A KL M+ +G + V+Y +++S + +V + + R QP+V
Sbjct: 192 KALCKNNRVDGACKLLVEMSNKGCEPDVVSYTTVISSMSKLGKVEEARELSIR--FQPNV 249
Query: 272 VSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKC 331
Y LIN + + + +E + +M++ G+ P Y+ ++ + + G V+ A V+
Sbjct: 250 SVYNALINGFCREYKVKEVFLLLGQMVEKGIDPNVITYSTVISSLSGIGNVELALAVWAK 309
Query: 332 MRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNN 391
M CSP++ ++T+++ Y + A + R+ ++GF PNV+ Y TLI G
Sbjct: 310 MFVRGCSPNVYTFTSLMKGYFMRGRVLEALNIWNRMAEEGFEPNVVAYNTLIHGLCSHGK 369
Query: 392 LEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAV-VWYKEMESCGFP 443
+ + + + KM NG PN + + ++D + K D A +W K M + P
Sbjct: 370 MGEAVSVSSKMERNGCSPNVSTYGALIDGFAKAGDLVGASEIWNKMMTNGCIP 422
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 81/309 (26%), Positives = 151/309 (48%), Gaps = 14/309 (4%)
Query: 150 AEAIFRRMQSSGP-RPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFH 208
A FR + +S + + LTYQI+++ + + + + V L + + + +F
Sbjct: 62 ASNYFRSIANSKAFQHTQLTYQIMIE---KLGRECDVDGVQYLLQQMKLEGISCSEDLFI 118
Query: 209 MMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSL---MSFETNYKEVSKIYDQMQRA 265
+I Y++ G E+A K+F + E G Q + YN L M E ++ + IY M+R
Sbjct: 119 NVINTYRRVGLAEQALKMFYRIREFGCQPTVKIYNHLLDAMLSENRFQMIEPIYSNMKRD 178
Query: 266 GLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQA 325
G +P+V +Y +L+ A K R + A + EM + G P +Y ++ + + G V++A
Sbjct: 179 GKEPNVYTYNILLKALCKNNRVDGACKLLVEMSNKGCEPDVVSYTTVISSMSKLGKVEEA 238
Query: 326 RTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKG 385
R + R P++ Y +++ + ++ ++ + G PNVITY T+I
Sbjct: 239 REL-----SIRFQPNVSVYNALINGFCREYKVKEVFLLLGQMVEKGIDPNVITYSTVISS 293
Query: 386 YAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAY-GKNKDFDSAVVWYKEMESCGFPP 444
+ + N+E + ++ KM V G PN FT++M Y + + ++ +W + E GF P
Sbjct: 294 LSGIGNVELALAVWAKMFVRGCSPNVYTFTSLMKGYFMRGRVLEALNIWNRMAEE-GFEP 352
Query: 445 DQKAKNILL 453
+ A N L+
Sbjct: 353 NVVAYNTLI 361
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 78/356 (21%), Positives = 168/356 (47%), Gaps = 7/356 (1%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
LI + ++ + +L M +KG P+V++++ ++ + G + A A++ +M G
Sbjct: 255 LINGFCREYKVKEVFLLLGQMVEKGIDPNVITYSTVISSLSGIGNVELALAVWAKMFVRG 314
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
P+ T+ ++K + + EA ++ + +E +P+ ++ +I+ G
Sbjct: 315 CSPNVYTFTSLMKGYFMRGRVLEALNIWNRMAEEG---FEPNVVAYNTLIHGLCSHGKMG 371
Query: 222 KARKLFALMAERGVQQSTVTYNSLM---SFETNYKEVSKIYDQMQRAGLQPDVVSYALLI 278
+A + + M G + TY +L+ + + S+I+++M G P+VV Y ++
Sbjct: 372 EAVSVSSKMERNGCSPNVSTYGALIDGFAKAGDLVGASEIWNKMMTNGCIPNVVVYTSMV 431
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCS 338
N ++ +A ++ E+M P +N + SG V+ A +F M + CS
Sbjct: 432 NVLCRSSMFSQAWSLIEKMSTDNCPPNTVTFNTFIKGLCCSGRVECAINLFCQMEQYGCS 491
Query: 339 PDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEI 398
P+I +Y +L + + ++ A + +++ G N++TY T+ G+ V E+ +++
Sbjct: 492 PNIKTYNEVLDGLLKENRIKEALELVTEMEEKGMELNLVTYNTIFGGFCNVGKFEEALKL 551
Query: 399 YDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCG-FPPDQKAKNILL 453
KM V G+KP+ + T+ AY +A+ ++ + G + P+ A LL
Sbjct: 552 LGKMLVGGVKPDAITYNTLTYAYCMQGKVKTAIQLLDKLSAGGKWVPEVAAYTSLL 607
Score = 112 bits (279), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 77/320 (24%), Positives = 148/320 (46%), Gaps = 15/320 (4%)
Query: 70 LKQLKKWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAP 129
L+ L WN ++E ++ N + + LI G +A V S M + G +P
Sbjct: 336 LEALNIWNRMAE--------EGFEPNVVAYNTLIHGLCSHGKMGEAVSVSSKMERNGCSP 387
Query: 130 SVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVF 189
+V ++ AL++ + + G A I+ +M ++G P+ + Y ++ + ++ F +A
Sbjct: 388 NVSTYGALIDGFAKAGDLVGASEIWNKMMTNGCIPNVVVYTSMVNVLCRSSMFSQAWS-L 446
Query: 190 MTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSF- 248
+ + + P P+ F+ I +G E A LF M + G + TYN ++
Sbjct: 447 IEKMSTDNCP--PNTVTFNTFIKGLCCSGRVECAINLFCQMEQYGCSPNIKTYNEVLDGL 504
Query: 249 --ETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTH 306
E KE ++ +M+ G++ ++V+Y + + + EEAL + +ML GV+P
Sbjct: 505 LKENRIKEALELVTEMEEKGMELNLVTYNTIFGGFCNVGKFEEALKLLGKMLVGGVKPDA 564
Query: 307 KAYNILLDAFAISGMVDQARTVF-KCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFR 365
YN L A+ + G V A + K + P++ +YT++L N +E A +
Sbjct: 565 ITYNTLTYAYCMQGKVKTAIQLLDKLSAGGKWVPEVAAYTSLLWGICNQIGVEEAVLYLD 624
Query: 366 RLKQDGFVPNVITYGTLIKG 385
++ +G N T+ L++G
Sbjct: 625 KMLNEGICLNAATWNALVRG 644
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 73/328 (22%), Positives = 148/328 (45%), Gaps = 7/328 (2%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N F L+ Y +G +A + + M ++G+ P+VV++ L+ G+ A ++
Sbjct: 318 NVYTFTSLMKGYFMRGRVLEALNIWNRMAEEGFEPNVVAYNTLIHGLCSHGKMGEAVSVS 377
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
+M+ +G P+ TY ++ F +A A E++ ++ + P+ ++ M+ +
Sbjct: 378 SKMERNGCSPNVSTYGALIDGFAKAGDLVGASEIWNKMMT---NGCIPNVVVYTSMVNVL 434
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSL---MSFETNYKEVSKIYDQMQRAGLQPDV 271
++ + +A L M+ +TVT+N+ + + ++ QM++ G P++
Sbjct: 435 CRSSMFSQAWSLIEKMSTDNCPPNTVTFNTFIKGLCCSGRVECAINLFCQMEQYGCSPNI 494
Query: 272 VSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKC 331
+Y +++ K R +EAL + EM + G+ YN + F G ++A +
Sbjct: 495 KTYNEVLDGLLKENRIKEALELVTEMEEKGMELNLVTYNTIFGGFCNVGKFEEALKLLGK 554
Query: 332 MRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDG-FVPNVITYGTLIKGYAKVN 390
M PD +Y T+ AY ++ A + +L G +VP V Y +L+ G
Sbjct: 555 MLVGGVKPDAITYNTLTYAYCMQGKVKTAIQLLDKLSAGGKWVPEVAAYTSLLWGICNQI 614
Query: 391 NLEKMMEIYDKMRVNGIKPNQTIFTTIM 418
+E+ + DKM GI N + ++
Sbjct: 615 GVEEAVLYLDKMLNEGICLNAATWNALV 642
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 75/174 (43%), Gaps = 5/174 (2%)
Query: 305 THKAYNILLDAFAISGMVDQARTVFKCMRRD--RCSPDICSYTTMLSAYVNASDMEGAEK 362
T Y I+++ VD + + + M+ + CS D+ + +++ Y E A K
Sbjct: 78 TQLTYQIMIEKLGRECDVDGVQYLLQQMKLEGISCSEDL--FINVINTYRRVGLAEQALK 135
Query: 363 FFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYG 422
F R+++ G P V Y L+ N + + IY M+ +G +PN + ++ A
Sbjct: 136 MFYRIREFGCQPTVKIYNHLLDAMLSENRFQMIEPIYSNMKRDGKEPNVYTYNILLKALC 195
Query: 423 KNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPN 476
KN D A EM + G PD + ++S + EA EL F PN
Sbjct: 196 KNNRVDGACKLLVEMSNKGCEPDVVSYTTVISSMSKLGKVEEARELSIRF-QPN 248
Score = 46.6 bits (109), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 42/211 (19%), Positives = 86/211 (40%), Gaps = 7/211 (3%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + F I G A + M + G +P++ ++ +++ + R K A +
Sbjct: 458 NTVTFNTFIKGLCCSGRVECAINLFCQMEQYGCSPNIKTYNEVLDGLLKENRIKEALELV 517
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
M+ G + +TY I F KF+EA ++ +L +KPD ++ + Y Y
Sbjct: 518 TEMEEKGMELNLVTYNTIFGGFCNVGKFEEALKLLGKML---VGGVKPDAITYNTLTYAY 574
Query: 215 KKAGGYEKARKLFALMAERGVQQSTV-TYNSLM---SFETNYKEVSKIYDQMQRAGLQPD 270
G + A +L ++ G V Y SL+ + +E D+M G+ +
Sbjct: 575 CMQGKVKTAIQLLDKLSAGGKWVPEVAAYTSLLWGICNQIGVEEAVLYLDKMLNEGICLN 634
Query: 271 VVSYALLINAYGKARREEEALAVFEEMLDAG 301
++ L+ + + + +++L +G
Sbjct: 635 AATWNALVRGLFNSLGHLGPIHILDDILTSG 665
>gi|302756537|ref|XP_002961692.1| hypothetical protein SELMODRAFT_76597 [Selaginella moellendorffii]
gi|300170351|gb|EFJ36952.1| hypothetical protein SELMODRAFT_76597 [Selaginella moellendorffii]
Length = 1056
Score = 145 bits (365), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 110/446 (24%), Positives = 211/446 (47%), Gaps = 19/446 (4%)
Query: 44 AVAVLRSERTRGQPLPKDLVLGTLVRLKQLKKWNVVSEVLEWLR--IQSWWDFNEMDFLM 101
AV VLR R G LP + TL+ K + E + LR +++ + + + +
Sbjct: 597 AVVVLRQMRDAGC-LPDAVTYNTLI--DGFFKRQRLREAVGLLREMLEAGFHPSVVTYTT 653
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRM-QSS 160
L + G F++A ++L +M +G AP+ ++++++++ + GR A F +M +
Sbjct: 654 LCHGLCRSGRFDEAVEILDYMAARGCAPNAITYSSIVDGLCKAGRVTEALGYFEKMARDE 713
Query: 161 GPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGY 220
P + Y ++ +A + EA E ++ ++ PD F ++I AG
Sbjct: 714 VVAPHVIAYSALIDGLCKAGRIDEAYEFLERMI---RAGRIPDVVTFSILINGLCDAGRI 770
Query: 221 EKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSKIY---DQMQRAGLQPDVVSYALL 277
+ +LF MAERG + YN++++ E S Y ++M+ G+ + V++ ++
Sbjct: 771 DTGLELFCGMAERGCKADIYAYNAMINAYCLKGEFSAAYALLEEMKTHGIAKNTVTHGIV 830
Query: 278 INAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRC 337
I A R +EA++ F + + +YN L+ + S +QA + + M D
Sbjct: 831 IKALCGNDRIDEAVSYFHSIPEDC--RDEISYNTLITSLVASRRSEQALELLRAMVADGG 888
Query: 338 SPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMME 397
SPD C+Y T++ A E A K + ++ G P++ TY +I G +K L +
Sbjct: 889 SPDACNYMTVMDGLFKAGSPEVAAKLLQEMRSRGHSPDLRTYTIMISGLSKAKQLPLACD 948
Query: 398 IYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILL-SLA 456
+++M +KP+ ++++++DA+ K D A +K + S G P + ++ SL
Sbjct: 949 YFEEMLRKNLKPDAIVYSSLIDAFCKADKVDDA---WKLLRSSGIEPTITMYSTMVDSLC 1005
Query: 457 KTADERNEANELLGNFNHPNNEPGIN 482
K ++A E++ N EPGI+
Sbjct: 1006 KNRGT-DKALEVIREMKSKNCEPGIH 1030
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 112/500 (22%), Positives = 223/500 (44%), Gaps = 33/500 (6%)
Query: 18 VFKDAADEAGKKNWRRLMN---QIEEVGSAVAVLRSERTRGQPLPKDLVLGTLVR-LKQL 73
+ +D +AG + L++ Q + A+ +L++ +P + +L+ L Q
Sbjct: 268 LLRDKNSQAGMFAFSSLLHGLCQAHRLEEAIQLLKAMPC----VPNVVCFNSLMNGLCQA 323
Query: 74 KKWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNK-KGYAPSVV 132
++ + E+ + ++ +S + + + +L+ K +A + + M + +G +P+VV
Sbjct: 324 RRVDEAFELFDVMK-ESGCSADVITYNILLKGLCKLRRIPEAYRHVELMRRTEGCSPNVV 382
Query: 133 SHTALMEAYGRGGRYKNAEAIFRRMQS-SGPRPSALTYQIILKLFVEANKFKEAEEVFMT 191
+ + L++ GR A ++ RM + G P+ TY +L+ +A + E+ F
Sbjct: 383 TFSTLIQGLCNAGRVNQAWEVYERMVAVEGISPNRFTYAFLLEGLCKAGDSRRLEQCFEQ 442
Query: 192 LLDEE---------KSP---------LKPDQKMFHMMIYMYKKAGGYEKARKLFALMAER 233
+L+ E SP +P ++ ++ K+G A L M E
Sbjct: 443 MLEREWRSSSSWPIHSPEVDFLMVQVCRPTLVTYNTLVTGLSKSGMVRDALGLLEFMIES 502
Query: 234 GVQQSTVTYNSLMSFETNYKEVSKIYDQMQRA---GLQPDVVSYALLINAYGKARREEEA 290
G+ +T+NS++ + + ++ +RA G +P+VV+Y+ LI+ K + +EA
Sbjct: 503 GLSPDVITFNSVLDGLCKEQRILDAHNVFKRALERGCRPNVVTYSTLIDGLSKMAKMDEA 562
Query: 291 LAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSA 350
L + +M++ G R Y+ ++D G ++ A V + MR C PD +Y T++
Sbjct: 563 LQLLAKMVELGCRANTVTYSTVVDGLLKVGRMEDAVVVLRQMRDAGCLPDAVTYNTLIDG 622
Query: 351 YVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPN 410
+ + A R + + GF P+V+TY TL G + ++ +EI D M G PN
Sbjct: 623 FFKRQRLREAVGLLREMLEAGFHPSVVTYTTLCHGLCRSGRFDEAVEILDYMAARGCAPN 682
Query: 411 QTIFTTIMDAYGKNKDFDSAVVWYKEM-ESCGFPPDQKAKNILLSLAKTADERNEANELL 469
+++I+D K A+ ++++M P A + L+ A +EA E L
Sbjct: 683 AITYSSIVDGLCKAGRVTEALGYFEKMARDEVVAPHVIAYSALIDGLCKAGRIDEAYEFL 742
Query: 470 GNFNHPNNEPGINGLSISVD 489
P + SI ++
Sbjct: 743 ERMIRAGRIPDVVTFSILIN 762
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 96/401 (23%), Positives = 182/401 (45%), Gaps = 23/401 (5%)
Query: 84 EWLRIQSWWDFN--EMDFLM-------------LITAYGKQGDFNKAEKVLSFMNKKGYA 128
EW R S W + E+DFLM L+T K G A +L FM + G +
Sbjct: 447 EW-RSSSSWPIHSPEVDFLMVQVCRPTLVTYNTLVTGLSKSGMVRDALGLLEFMIESGLS 505
Query: 129 PSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEV 188
P V++ ++++ + R +A +F+R G RP+ +TY ++ + K EA ++
Sbjct: 506 PDVITFNSVLDGLCKEQRILDAHNVFKRALERGCRPNVVTYSTLIDGLSKMAKMDEALQL 565
Query: 189 FMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSF 248
+++ + + + ++ K G E A + M + G VTYN+L+
Sbjct: 566 LAKMVE---LGCRANTVTYSTVVDGLLKVGRMEDAVVVLRQMRDAGCLPDAVTYNTLIDG 622
Query: 249 ---ETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPT 305
+E + +M AG P VV+Y L + ++ R +EA+ + + M G P
Sbjct: 623 FFKRQRLREAVGLLREMLEAGFHPSVVTYTTLCHGLCRSGRFDEAVEILDYMAARGCAPN 682
Query: 306 HKAYNILLDAFAISGMVDQARTVFKCMRRDR-CSPDICSYTTMLSAYVNASDMEGAEKFF 364
Y+ ++D +G V +A F+ M RD +P + +Y+ ++ A ++ A +F
Sbjct: 683 AITYSSIVDGLCKAGRVTEALGYFEKMARDEVVAPHVIAYSALIDGLCKAGRIDEAYEFL 742
Query: 365 RRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKN 424
R+ + G +P+V+T+ LI G ++ +E++ M G K + + +++AY
Sbjct: 743 ERMIRAGRIPDVVTFSILINGLCDAGRIDTGLELFCGMAERGCKADIYAYNAMINAYCLK 802
Query: 425 KDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEA 465
+F +A +EM++ G + I++ D +EA
Sbjct: 803 GEFSAAYALLEEMKTHGIAKNTVTHGIVIKALCGNDRIDEA 843
Score = 125 bits (314), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 86/332 (25%), Positives = 157/332 (47%), Gaps = 8/332 (2%)
Query: 97 MDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRR 156
+ F ++I K+G+ A +V+ M +G+ P V HT L+ A GR A F++
Sbjct: 107 ITFGLIIKGLCKEGEIEAAFRVVDEMVDRGFVPDVEIHTVLLHALCELGRVDEAWFFFQQ 166
Query: 157 MQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKK 216
+ G P A+TY ++ +A + EA + + LL E S P F + + K
Sbjct: 167 VLLIGFTPDAVTYNTMVDGLYKAGRL-EAAGMVLQLLAESFS--SPTVFTFTIAVDGLSK 223
Query: 217 AGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSKIYDQMQRAGLQPDVVSYAL 276
AG A + F M + GV +TVTY++L+ ++ ++ Q + +++
Sbjct: 224 AGNLTGAYEFFDSMPQTGVSPNTVTYDALIDGLCKAGKLDIALGLLRDKNSQAGMFAFSS 283
Query: 277 LINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDR 336
L++ +A R EEA+ + + M P +N L++ + VD+A +F M+
Sbjct: 284 LLHGLCQAHRLEEAIQLLKAM---PCVPNVVCFNSLMNGLCQARRVDEAFELFDVMKESG 340
Query: 337 CSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQ-DGFVPNVITYGTLIKGYAKVNNLEKM 395
CS D+ +Y +L + A + +++ +G PNV+T+ TLI+G + +
Sbjct: 341 CSADVITYNILLKGLCKLRRIPEAYRHVELMRRTEGCSPNVVTFSTLIQGLCNAGRVNQA 400
Query: 396 MEIYDKM-RVNGIKPNQTIFTTIMDAYGKNKD 426
E+Y++M V GI PN+ + +++ K D
Sbjct: 401 WEVYERMVAVEGISPNRFTYAFLLEGLCKAGD 432
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 75/304 (24%), Positives = 125/304 (41%), Gaps = 41/304 (13%)
Query: 131 VVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFM 190
+V++ L+ + GR +A FR+ G RP+ +TY ++ N+
Sbjct: 1 MVTYNVLINGLCKAGRVCDAFTAFRKAIQFGFRPTVVTYSTVIDGLCRDNEV-------- 52
Query: 191 TLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSF-- 248
+K KL MA RG + VTYN+L++
Sbjct: 53 ------------------------------DKGCKLLEEMAGRGCAPNAVTYNTLVNALL 82
Query: 249 -ETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHK 307
+ KE + ++M G P+++++ L+I K E A V +EM+D G P +
Sbjct: 83 GQGRAKEAFSLLERMAANGCPPELITFGLIIKGLCKEGEIEAAFRVVDEMVDRGFVPDVE 142
Query: 308 AYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRL 367
+ +LL A G VD+A F+ + +PD +Y TM+ A +E A + L
Sbjct: 143 IHTVLLHALCELGRVDEAWFFFQQVLLIGFTPDAVTYNTMVDGLYKAGRLEAAGMVLQLL 202
Query: 368 KQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDF 427
+ P V T+ + G +K NL E +D M G+ PN + ++D K
Sbjct: 203 AESFSSPTVFTFTIAVDGLSKAGNLTGAYEFFDSMPQTGVSPNTVTYDALIDGLCKAGKL 262
Query: 428 DSAV 431
D A+
Sbjct: 263 DIAL 266
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 82/382 (21%), Positives = 143/382 (37%), Gaps = 64/382 (16%)
Query: 101 MLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSS 160
+LI K G A + G+ P+VV+++ +++ R + M
Sbjct: 6 VLINGLCKAGRVCDAFTAFRKAIQFGFRPTVVTYSTVIDGLCRDNEVDKGCKLLEEMAGR 65
Query: 161 GPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGY 220
G P+A+TY ++ + + KEA F L + P+ F ++I K G
Sbjct: 66 GCAPNAVTYNTLVNALLGQGRAKEA---FSLLERMAANGCPPELITFGLIIKGLCKEGEI 122
Query: 221 EKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSKIYDQMQRAGLQPDVVSYALLINA 280
E A ++ D+M G PDV + +L++A
Sbjct: 123 EAA--------------------------------FRVVDEMVDRGFVPDVEIHTVLLHA 150
Query: 281 YGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPD 340
+ R +EA F+++L G P YN ++D +G ++ A V + + SP
Sbjct: 151 LCELGRVDEAWFFFQQVLLIGFTPDAVTYNTMVDGLYKAGRLEAAGMVLQLLAESFSSPT 210
Query: 341 ICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLE------- 393
+ ++T + A ++ GA +FF + Q G PN +TY LI G K L+
Sbjct: 211 VFTFTIAVDGLSKAGNLTGAYEFFDSMPQTGVSPNTVTYDALIDGLCKAGKLDIALGLLR 270
Query: 394 ----------------------KMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAV 431
++ E ++ PN F ++M+ + + D A
Sbjct: 271 DKNSQAGMFAFSSLLHGLCQAHRLEEAIQLLKAMPCVPNVVCFNSLMNGLCQARRVDEAF 330
Query: 432 VWYKEMESCGFPPDQKAKNILL 453
+ M+ G D NILL
Sbjct: 331 ELFDVMKESGCSADVITYNILL 352
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 101/219 (46%)
Query: 271 VVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFK 330
+V+Y +LIN KA R +A F + + G RPT Y+ ++D VD+ + +
Sbjct: 1 MVTYNVLINGLCKAGRVCDAFTAFRKAIQFGFRPTVVTYSTVIDGLCRDNEVDKGCKLLE 60
Query: 331 CMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVN 390
M C+P+ +Y T+++A + + A R+ +G P +IT+G +IKG K
Sbjct: 61 EMAGRGCAPNAVTYNTLVNALLGQGRAKEAFSLLERMAANGCPPELITFGLIIKGLCKEG 120
Query: 391 NLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKN 450
+E + D+M G P+ I T ++ A + D A +++++ GF PD N
Sbjct: 121 EIEAAFRVVDEMVDRGFVPDVEIHTVLLHALCELGRVDEAWFFFQQVLLIGFTPDAVTYN 180
Query: 451 ILLSLAKTADERNEANELLGNFNHPNNEPGINGLSISVD 489
++ A A +L + P + +I+VD
Sbjct: 181 TMVDGLYKAGRLEAAGMVLQLLAESFSSPTVFTFTIAVD 219
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 68/270 (25%), Positives = 131/270 (48%), Gaps = 11/270 (4%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
+I AY +G+F+ A +L M G A + V+H +++A R A + F +
Sbjct: 795 MINAYCLKGEFSAAYALLEEMKTHGIAKNTVTHGIVIKALCGNDRIDEAVSYFHSIPEDC 854
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
++Y ++ V + + ++A E+ ++ + SP D + ++ KAG E
Sbjct: 855 R--DEISYNTLITSLVASRRSEQALELLRAMVADGGSP---DACNYMTVMDGLFKAGSPE 909
Query: 222 KARKLFALMAERGVQQSTVTYNSLMSFETNYKEV---SKIYDQMQRAGLQPDVVSYALLI 278
A KL M RG TY ++S + K++ +++M R L+PD + Y+ LI
Sbjct: 910 VAAKLLQEMRSRGHSPDLRTYTIMISGLSKAKQLPLACDYFEEMLRKNLKPDAIVYSSLI 969
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCS 338
+A+ KA + ++A ++ + +G+ PT Y+ ++D+ + D+A V + M+ C
Sbjct: 970 DAFCKADKVDDA---WKLLRSSGIEPTITMYSTMVDSLCKNRGTDKALEVIREMKSKNCE 1026
Query: 339 PDICSYTTMLSAYVNASDMEGAEKFFRRLK 368
P I +T++ +AYV ++ A K L+
Sbjct: 1027 PGIHIWTSLATAYVAEGRVDEAVKLVNDLQ 1056
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/282 (23%), Positives = 120/282 (42%), Gaps = 6/282 (2%)
Query: 207 FHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEV---SKIYDQMQ 263
++++I KAG A F + G + + VTY++++ EV K+ ++M
Sbjct: 4 YNVLINGLCKAGRVCDAFTAFRKAIQFGFRPTVVTYSTVIDGLCRDNEVDKGCKLLEEMA 63
Query: 264 RAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVD 323
G P+ V+Y L+NA R +EA ++ E M G P + +++ G ++
Sbjct: 64 GRGCAPNAVTYNTLVNALLGQGRAKEAFSLLERMAANGCPPELITFGLIIKGLCKEGEIE 123
Query: 324 QARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLI 383
A V M PD+ +T +L A ++ A FF+++ GF P+ +TY T++
Sbjct: 124 AAFRVVDEMVDRGFVPDVEIHTVLLHALCELGRVDEAWFFFQQVLLIGFTPDAVTYNTMV 183
Query: 384 KGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFP 443
G K LE + + + P FT +D K + A ++ M G
Sbjct: 184 DGLYKAGRLEAAGMVLQLLAESFSSPTVFTFTIAVDGLSKAGNLTGAYEFFDSMPQTGVS 243
Query: 444 PDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGINGLS 485
P+ + L+ A + + A LG N++ G+ S
Sbjct: 244 PNTVTYDALIDGLCKAGKLDIA---LGLLRDKNSQAGMFAFS 282
>gi|255546465|ref|XP_002514292.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223546748|gb|EEF48246.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 608
Score = 145 bits (365), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 98/361 (27%), Positives = 175/361 (48%), Gaps = 7/361 (1%)
Query: 125 KGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKE 184
K +V S T LM G+ A IF + G RP+ +TY L K K
Sbjct: 52 KNSCRTVHSRTKLMNILIGKGKPHEANLIFDNLVEDGHRPTLITYT---TLVAALTKLKH 108
Query: 185 AEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNS 244
E +F+ + E++ +KPD +++ MI + ++G ++A K+F M + G + +T T+N+
Sbjct: 109 FESIFLLISKVEENGMKPDSILYNAMINAFSESGNVKEAMKIFQKMKDTGCKPTTSTFNT 168
Query: 245 LMSFETNY---KEVSKIYDQMQRAG-LQPDVVSYALLINAYGKARREEEALAVFEEMLDA 300
L+ N +E K+ M G ++P+ +Y +L+ A+ + EEA V +M+ +
Sbjct: 169 LIKGYGNAGKPEEGLKMLHLMSLDGSVKPNDRTYNILVRAWCSKKNIEEAWNVLHKMVAS 228
Query: 301 GVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGA 360
G++P YNIL A+A G +A + M+ ++ +P+ + +++ Y +M A
Sbjct: 229 GIQPDVVTYNILARAYAQKGETLRAEDLILEMQYEKVAPNERTCGIIVNGYCKEGNMIEA 288
Query: 361 EKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDA 420
+F R+K+ G PN++ + +LIKG+ + + + + E M G+KP+ F+TIM+A
Sbjct: 289 LRFVYRMKELGVHPNLVIFNSLIKGFLDITDTDGVDEALTLMEEYGVKPDVITFSTIMNA 348
Query: 421 YGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPG 480
+ D + +M G PD A +IL A E A +L + P
Sbjct: 349 WSSAGLMDKCQEIFNDMAKAGIEPDIHAFSILAKGYVRAGETENAESVLTSMAKSGVRPN 408
Query: 481 I 481
+
Sbjct: 409 V 409
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 84/327 (25%), Positives = 164/327 (50%), Gaps = 7/327 (2%)
Query: 99 FLMLITAYGKQGDFNKAEKVLSFMNKKGYA-PSVVSHTALMEAYGRGGRYKNAEAIFRRM 157
F LI YG G + K+L M+ G P+ ++ L+ A+ + A + +M
Sbjct: 166 FNTLIKGYGNAGKPEEGLKMLHLMSLDGSVKPNDRTYNILVRAWCSKKNIEEAWNVLHKM 225
Query: 158 QSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKA 217
+SG +P +TY I+ + + + + AE++ +L+ + + P+++ +++ Y K
Sbjct: 226 VASGIQPDVVTYNILARAYAQKGETLRAEDL---ILEMQYEKVAPNERTCGIIVNGYCKE 282
Query: 218 GGYEKARKLFALMAERGVQQSTVTYNSLMSF---ETNYKEVSKIYDQMQRAGLQPDVVSY 274
G +A + M E GV + V +NSL+ T+ V + M+ G++PDV+++
Sbjct: 283 GNMIEALRFVYRMKELGVHPNLVIFNSLIKGFLDITDTDGVDEALTLMEEYGVKPDVITF 342
Query: 275 ALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRR 334
+ ++NA+ A ++ +F +M AG+ P A++IL + +G + A +V M +
Sbjct: 343 STIMNAWSSAGLMDKCQEIFNDMAKAGIEPDIHAFSILAKGYVRAGETENAESVLTSMAK 402
Query: 335 DRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEK 394
P++ TT++S + +A ME A+ + ++ + G PN+ T+ TLI GYA+ K
Sbjct: 403 SGVRPNVVICTTIISGWCSAGKMENAKMVYEKMCEIGISPNLKTFETLIWGYAEARQPGK 462
Query: 395 MMEIYDKMRVNGIKPNQTIFTTIMDAY 421
E+ M G+ P ++ + DA+
Sbjct: 463 AEELLQLMEEKGVFPEKSTIQLVADAW 489
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 93/379 (24%), Positives = 175/379 (46%), Gaps = 11/379 (2%)
Query: 97 MDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRR 156
+ + L+ A K F ++S + + G P + + A++ A+ G K A IF++
Sbjct: 94 ITYTTLVAALTKLKHFESIFLLISKVEENGMKPDSILYNAMINAFSESGNVKEAMKIFQK 153
Query: 157 MQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKK 216
M+ +G +P+ T+ ++K + N K E + M L +KP+ + +++++ +
Sbjct: 154 MKDTGCKPTTSTFNTLIKGY--GNAGKPEEGLKMLHLMSLDGSVKPNDRTYNILVRAWCS 211
Query: 217 AGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSKIYD---QMQRAGLQPDVVS 273
E+A + M G+Q VTYN L E + D +MQ + P+ +
Sbjct: 212 KKNIEEAWNVLHKMVASGIQPDVVTYNILARAYAQKGETLRAEDLILEMQYEKVAPNERT 271
Query: 274 YALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAF---AISGMVDQARTVFK 330
+++N Y K EAL M + GV P +N L+ F + VD+A T+
Sbjct: 272 CGIIVNGYCKEGNMIEALRFVYRMKELGVHPNLVIFNSLIKGFLDITDTDGVDEALTL-- 329
Query: 331 CMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVN 390
M PD+ +++T+++A+ +A M+ ++ F + + G P++ + L KGY +
Sbjct: 330 -MEEYGVKPDVITFSTIMNAWSSAGLMDKCQEIFNDMAKAGIEPDIHAFSILAKGYVRAG 388
Query: 391 NLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKN 450
E + M +G++PN I TTI+ + ++A + Y++M G P+ K
Sbjct: 389 ETENAESVLTSMAKSGVRPNVVICTTIISGWCSAGKMENAKMVYEKMCEIGISPNLKTFE 448
Query: 451 ILLSLAKTADERNEANELL 469
L+ A + +A ELL
Sbjct: 449 TLIWGYAEARQPGKAEELL 467
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 76/349 (21%), Positives = 157/349 (44%), Gaps = 21/349 (6%)
Query: 55 GQPLPKDLVLGTLVRLKQLKK-----WNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQ 109
G P D LVR KK WNV+ ++ + S + + + +L AY ++
Sbjct: 193 GSVKPNDRTYNILVRAWCSKKNIEEAWNVLHKM-----VASGIQPDVVTYNILARAYAQK 247
Query: 110 GDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTY 169
G+ +AE ++ M + AP+ + ++ Y + G A RM+ G P+ + +
Sbjct: 248 GETLRAEDLILEMQYEKVAPNERTCGIIVNGYCKEGNMIEALRFVYRMKELGVHPNLVIF 307
Query: 170 QIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFAL 229
++K F++ +E +TL++E +KPD F ++ + AG +K +++F
Sbjct: 308 NSLIKGFLDITDTDGVDEA-LTLMEEYG--VKPDVITFSTIMNAWSSAGLMDKCQEIFND 364
Query: 230 MAERGVQQSTVTYNSLMSFETNYKEVS---KIYDQMQRAGLQPDVVSYALLINAYGKARR 286
MA+ G++ ++ L E + M ++G++P+VV +I+ + A +
Sbjct: 365 MAKAGIEPDIHAFSILAKGYVRAGETENAESVLTSMAKSGVRPNVVICTTIISGWCSAGK 424
Query: 287 EEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTT 346
E A V+E+M + G+ P K + L+ +A + +A + + M P+ +
Sbjct: 425 MENAKMVYEKMCEIGISPNLKTFETLIWGYAEARQPGKAEELLQLMEEKGVFPEKSTIQL 484
Query: 347 MLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKM 395
+ A+ N + A++ + ++D + Y +G V +LE++
Sbjct: 485 VADAWRNIGLLCEAKRITKIEEEDEEL-----YADCKRGEIPVESLERI 528
>gi|147858101|emb|CAN78867.1| hypothetical protein VITISV_041982 [Vitis vinifera]
Length = 962
Score = 145 bits (365), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 95/351 (27%), Positives = 172/351 (49%), Gaps = 6/351 (1%)
Query: 99 FLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQ 158
+ + ITA +A ++++ M K+G P+V ++TAL+ R G+ + A ++ +M
Sbjct: 348 YTLPITALCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKML 407
Query: 159 SSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAG 218
G P+ +TY ++ +F A ++F + E L Q ++ +I G
Sbjct: 408 KEGLVPNTVTYNALINELCVGGRFSTALKIFHWM--EGHGSLANTQT-YNEIIKGLCLGG 464
Query: 219 GYEKARKLFALMAERGVQQSTVTYNSLMS---FETNYKEVSKIYDQMQRAGLQPDVVSYA 275
EKA LF M + G + VTYN+L++ + N +++ D M+ G +PD +Y
Sbjct: 465 DIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYN 524
Query: 276 LLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRD 335
L++ + K + E A F+EM++ G+ P +Y L+D + G VD A ++ + M
Sbjct: 525 ELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTTLIDGHSKDGKVDIALSLLERMEEM 584
Query: 336 RCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKM 395
C+P++ SY +++ + AEK ++ + G +PNVITY TLI G + +
Sbjct: 585 GCNPNVESYNAVINGLSKENRFSEAEKICDKMAEQGLLPNVITYTTLIDGLCRNGRTQFA 644
Query: 396 MEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQ 446
+I+ M PN +++++ + D A + KEME G PD+
Sbjct: 645 FKIFHDMEKRKCLPNLYTYSSLIYGLCQEGKADEAEILLKEMERKGLAPDE 695
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 92/362 (25%), Positives = 168/362 (46%), Gaps = 6/362 (1%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + LI+ + G A + M K+G P+ V++ AL+ GGR+ A IF
Sbjct: 379 NVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTALKIF 438
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
M+ G + TY I+K ++A +F +L + PL P ++ +I Y
Sbjct: 439 HWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKML--KMGPL-PTVVTYNTLINGY 495
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEV---SKIYDQMQRAGLQPDV 271
G A +L LM E G + TYN L+S + + ++ S + +M GL P+
Sbjct: 496 LTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPNP 555
Query: 272 VSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKC 331
VSY LI+ + K + + AL++ E M + G P ++YN +++ + +A +
Sbjct: 556 VSYTTLIDGHSKDGKVDIALSLLERMEEMGCNPNVESYNAVINGLSKENRFSEAEKICDK 615
Query: 332 MRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNN 391
M P++ +YTT++ + A K F +++ +PN+ TY +LI G +
Sbjct: 616 MAEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQEGK 675
Query: 392 LEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNI 451
++ + +M G+ P++ FT+++D + D A + + M G P+ + ++
Sbjct: 676 ADEAEILLKEMERKGLAPDEVTFTSLIDGFVVLGRIDHAFLLLRRMVDVGCKPNYRTYSV 735
Query: 452 LL 453
LL
Sbjct: 736 LL 737
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 91/375 (24%), Positives = 182/375 (48%), Gaps = 6/375 (1%)
Query: 97 MDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRR 156
+ F LI K+G +AE +LS + + +P V ++T+L+ + R A +F R
Sbjct: 241 LTFNTLINILSKKGKVREAELILSQIFQYDLSPDVFTYTSLILGHCRNRNLDLAFGVFDR 300
Query: 157 MQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKK 216
M G P+++TY ++ + EA ++ ++++ ++P + + I
Sbjct: 301 MVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEK---GIEPTVYTYTLPITALCA 357
Query: 217 AGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVS---KIYDQMQRAGLQPDVVS 273
E+A +L A M +RG + + TY +L+S + ++ +Y +M + GL P+ V+
Sbjct: 358 IEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVT 417
Query: 274 YALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMR 333
Y LIN R AL +F M G + YN ++ + G +++A +F+ M
Sbjct: 418 YNALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKML 477
Query: 334 RDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLE 393
+ P + +Y T+++ Y+ ++ A + +K++G P+ TY L+ G++K LE
Sbjct: 478 KMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLE 537
Query: 394 KMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILL 453
+ +M G+ PN +TT++D + K+ D A+ + ME G P+ ++ N ++
Sbjct: 538 SASFYFQEMVECGLNPNPVSYTTLIDGHSKDGKVDIALSLLERMEEMGCNPNVESYNAVI 597
Query: 454 SLAKTADERNEANEL 468
+ + +EA ++
Sbjct: 598 NGLSKENRFSEAEKI 612
Score = 128 bits (322), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 96/433 (22%), Positives = 188/433 (43%), Gaps = 52/433 (12%)
Query: 100 LMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQS 159
+++I A + + + L+ ++ G+ S+ S L+ + + A ++++M +
Sbjct: 174 ILMIKACRNEEEIRRVADFLNEISGMGFGFSLYSCNTLLIQLAKFEMVEGARNLYKQMLN 233
Query: 160 SGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGG 219
SG +PS LT+ ++ + + K +EAE + + + L PD + +I + +
Sbjct: 234 SGIQPSLLTFNTLINILSKKGKVREAELILSQIFQYD---LSPDVFTYTSLILGHCRNRN 290
Query: 220 YEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSKIYD------------------- 260
+ A +F M + G ++VTY++L++ N V + D
Sbjct: 291 LDLAFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTL 350
Query: 261 -------------------QMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAG 301
+M++ G +P+V +Y LI+ + + E A+ ++ +ML G
Sbjct: 351 PITALCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEG 410
Query: 302 VRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAE 361
+ P YN L++ + G A +F M + +Y ++ D+E A
Sbjct: 411 LVPNTVTYNALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAM 470
Query: 362 KFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAY 421
F ++ + G +P V+TY TLI GY N+ + D M+ NG +P++ + ++ +
Sbjct: 471 VLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGF 530
Query: 422 GKNKDFDSAVVWYKEMESCGFPPDQKAKNILL---------SLAKTADERNEANELLGNF 472
K +SA +++EM CG P+ + L+ +A + ER E E+ N
Sbjct: 531 SKWGKLESASFYFQEMVECGLNPNPVSYTTLIDGHSKDGKVDIALSLLERME--EMGCNP 588
Query: 473 NHPNNEPGINGLS 485
N + INGLS
Sbjct: 589 NVESYNAVINGLS 601
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 82/360 (22%), Positives = 161/360 (44%), Gaps = 8/360 (2%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + + LI G F+ A K+ +M G + ++ +++ GG + A +F
Sbjct: 414 NTVTYNALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLF 473
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEK-SPLKPDQKMFHMMIYM 213
+M GP P+ +TY ++ ++ A LLD K + +PD+ ++ ++
Sbjct: 474 EKMLKMGPLPTVVTYNTLINGYLTKGNVNNAAR----LLDLMKENGCEPDEWTYNELVSG 529
Query: 214 YKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVS---KIYDQMQRAGLQPD 270
+ K G E A F M E G+ + V+Y +L+ + +V + ++M+ G P+
Sbjct: 530 FSKWGKLESASFYFQEMVECGLNPNPVSYTTLIDGHSKDGKVDIALSLLERMEEMGCNPN 589
Query: 271 VVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFK 330
V SY +IN K R EA + ++M + G+ P Y L+D +G A +F
Sbjct: 590 VESYNAVINGLSKENRFSEAEKICDKMAEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFH 649
Query: 331 CMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVN 390
M + +C P++ +Y++++ + AE + +++ G P+ +T+ +LI G+ +
Sbjct: 650 DMEKRKCLPNLYTYSSLIYGLCQEGKADEAEILLKEMERKGLAPDEVTFTSLIDGFVVLG 709
Query: 391 NLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKN 450
++ + +M G KPN ++ ++ K V + F P +K N
Sbjct: 710 RIDHAFLLLRRMVDVGCKPNYRTYSVLLKGLQKECLLLEEKVAVQHEAVYSFSPHEKDVN 769
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 100/434 (23%), Positives = 192/434 (44%), Gaps = 29/434 (6%)
Query: 47 VLRSERTRGQPLPKDLVLGTLVRLKQLKKWNV--VSEVLEWLRIQSW----WDFNEMDFL 100
VL + + PLP + TL+ L K NV + +L+ ++ W +NE
Sbjct: 471 VLFEKMLKMGPLPTVVTYNTLIN-GYLTKGNVNNAARLLDLMKENGCEPDEWTYNE---- 525
Query: 101 MLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSS 160
L++ + K G A M + G P+ VS+T L++ + + G+ A ++ RM+
Sbjct: 526 -LVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTTLIDGHSKDGKVDIALSLLERMEEM 584
Query: 161 GPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGY 220
G P+ +Y ++ + N+F EAE++ + ++ L P+ + +I + G
Sbjct: 585 GCNPNVESYNAVINGLSKENRFSEAEKICDKMAEQ---GLLPNVITYTTLIDGLCRNGRT 641
Query: 221 EKARKLFALMAERGVQQSTVTYNSL---MSFETNYKEVSKIYDQMQRAGLQPDVVSYALL 277
+ A K+F M +R + TY+SL + E E + +M+R GL PD V++ L
Sbjct: 642 QFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQEGKADEAEILLKEMERKGLAPDEVTFTSL 701
Query: 278 INAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRC 337
I+ + R + A + M+D G +P ++ Y++LL ++ + + +
Sbjct: 702 IDGFVVLGRIDHAFLLLRRMVDVGCKPNYRTYSVLLKGLQKECLLLEEKVAVQ------- 754
Query: 338 SPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMME 397
+ S+ S + + E R+ + G P + TY TL+ G + + +
Sbjct: 755 HEAVYSF----SPHEKDVNFEIVSNLLARMSEIGCEPTLDTYSTLVSGLCRKGRFYEAEQ 810
Query: 398 IYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAK 457
+ M+ G P++ I+ +++ A+ KN + D A+ + +E+ GF L+
Sbjct: 811 LVKDMKERGFCPDREIYYSLLIAHCKNLEVDHALKIFHSIEAKGFQLHLSIYRALICALC 870
Query: 458 TADERNEANELLGN 471
A + EA L N
Sbjct: 871 KAGQVEEAQALFDN 884
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 79/309 (25%), Positives = 144/309 (46%), Gaps = 23/309 (7%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
LI ++G ++AE +L M +KG AP V+ T+L++ + GR +A + RRM G
Sbjct: 666 LIYGLCQEGKADEAEILLKEMERKGLAPDEVTFTSLIDGFVVLGRIDHAFLLLRRMVDVG 725
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY---KKAG 218
+P+ TY ++LK KE LL EEK ++ H +Y + +K
Sbjct: 726 CKPNYRTYSVLLK-----GLQKEC------LLLEEKVAVQ------HEAVYSFSPHEKDV 768
Query: 219 GYEKARKLFALMAERGVQQSTVTYNSLMS---FETNYKEVSKIYDQMQRAGLQPDVVSYA 275
+E L A M+E G + + TY++L+S + + E ++ M+ G PD Y
Sbjct: 769 NFEIVSNLLARMSEIGCEPTLDTYSTLVSGLCRKGRFYEAEQLVKDMKERGFCPDREIYY 828
Query: 276 LLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRD 335
L+ A+ K + AL +F + G + Y L+ A +G V++A+ +F M
Sbjct: 829 SLLIAHCKNLEVDHALKIFHSIEAKGFQLHLSIYRALICALCKAGQVEEAQALFDNMLEK 888
Query: 336 RCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKM 395
+ D +T ++ + +++ K ++ F PN+ TY L + +++ +
Sbjct: 889 EWNADEIVWTVLVDGLLKEGELDLCMKLLHIMESKNFTPNIQTYVILGRELSRIGKSIES 948
Query: 396 MEIYDKMRV 404
+ DK++V
Sbjct: 949 EPLADKLKV 957
>gi|15218855|ref|NP_171855.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75180297|sp|Q9LR67.1|PPR9_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g03560, mitochondrial; Flags: Precursor
gi|9280662|gb|AAF86531.1|AC002560_24 F21B7.18 [Arabidopsis thaliana]
gi|332189465|gb|AEE27586.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 660
Score = 145 bits (365), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 90/357 (25%), Positives = 172/357 (48%), Gaps = 6/357 (1%)
Query: 85 WLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRG 144
W R Q + N ++ L+ D ++ V S + K + +V + AL++++G+
Sbjct: 141 WSRKQKKYTHNLECYVSLVDVLALAKDVDRIRFVSSEIKKFEFPMTVSAANALIKSFGKL 200
Query: 145 GRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQ 204
G + ++R+M+ +G P+ TY ++ V A AE VF + E +KPD
Sbjct: 201 GMVEELLWVWRKMKENGIEPTLYTYNFLMNGLVSAMFVDSAERVFEVM---ESGRIKPDI 257
Query: 205 KMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSF---ETNYKEVSKIYDQ 261
++ MI Y KAG +KA + M RG + +TY +++ ++++ +Y +
Sbjct: 258 VTYNTMIKGYCKAGQTQKAMEKLRDMETRGHEADKITYMTMIQACYADSDFGSCVALYQE 317
Query: 262 MQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGM 321
M G+Q +++L+I K + E VFE M+ G +P Y +L+D +A SG
Sbjct: 318 MDEKGIQVPPHAFSLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGYAKSGS 377
Query: 322 VDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGT 381
V+ A + M + PD+ +Y+ +++ +E A +F + DG N + Y +
Sbjct: 378 VEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFHTCRFDGLAINSMFYSS 437
Query: 382 LIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEME 438
LI G K +++ ++++M G + + ++DA+ K++ D A+ +K ME
Sbjct: 438 LIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYNALIDAFTKHRKVDEAIALFKRME 494
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 63/235 (26%), Positives = 115/235 (48%), Gaps = 7/235 (2%)
Query: 99 FLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQ 158
F ++I K+G N+ V M +KG P+V +T L++ Y + G ++A + RM
Sbjct: 330 FSLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMI 389
Query: 159 SSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAG 218
G +P +TY +++ + + +EA + F T L + + +I KAG
Sbjct: 390 DEGFKPDVVTYSVVVNGLCKNGRVEEALDYFHTC---RFDGLAINSMFYSSLIDGLGKAG 446
Query: 219 GYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSKIYDQMQRA----GLQPDVVSY 274
++A +LF M+E+G + + YN+L+ T +++V + +R G V +Y
Sbjct: 447 RVDEAERLFEEMSEKGCTRDSYCYNALIDAFTKHRKVDEAIALFKRMEEEEGCDQTVYTY 506
Query: 275 ALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVF 329
+L++ K R EEAL +++ M+D G+ PT + L +SG V +A +
Sbjct: 507 TILLSGMFKEHRNEEALKLWDMMIDKGITPTAACFRALSTGLCLSGKVARACKIL 561
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 95/222 (42%), Gaps = 36/222 (16%)
Query: 269 PDVVSYA-LLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQART 327
P VS A LI ++GK EE L V+ +M + G+ PT YN L++ + VD A
Sbjct: 184 PMTVSAANALIKSFGKLGMVEELLWVWRKMKENGIEPTLYTYNFLMNGLVSAMFVDSAER 243
Query: 328 VFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIK--- 384
VF+ M R PDI +Y TM+ Y A + A + R ++ G + ITY T+I+
Sbjct: 244 VFEVMESGRIKPDIVTYNTMIKGYCKAGQTQKAMEKLRDMETRGHEADKITYMTMIQACY 303
Query: 385 --------------------------------GYAKVNNLEKMMEIYDKMRVNGIKPNQT 412
G K L + +++ M G KPN
Sbjct: 304 ADSDFGSCVALYQEMDEKGIQVPPHAFSLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVA 363
Query: 413 IFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLS 454
I+T ++D Y K+ + A+ M GF PD +++++
Sbjct: 364 IYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVN 405
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 92/185 (49%)
Query: 305 THKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFF 364
T A N L+ +F GMV++ V++ M+ + P + +Y +++ V+A ++ AE+ F
Sbjct: 186 TVSAANALIKSFGKLGMVEELLWVWRKMKENGIEPTLYTYNFLMNGLVSAMFVDSAERVF 245
Query: 365 RRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKN 424
++ P+++TY T+IKGY K +K ME M G + ++ + T++ A +
Sbjct: 246 EVMESGRIKPDIVTYNTMIKGYCKAGQTQKAMEKLRDMETRGHEADKITYMTMIQACYAD 305
Query: 425 KDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGINGL 484
DF S V Y+EM+ G A ++++ + NE + N ++P +
Sbjct: 306 SDFGSCVALYQEMDEKGIQVPPHAFSLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIY 365
Query: 485 SISVD 489
++ +D
Sbjct: 366 TVLID 370
>gi|297816676|ref|XP_002876221.1| hypothetical protein ARALYDRAFT_906766 [Arabidopsis lyrata subsp.
lyrata]
gi|297322059|gb|EFH52480.1| hypothetical protein ARALYDRAFT_906766 [Arabidopsis lyrata subsp.
lyrata]
Length = 754
Score = 145 bits (365), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 99/379 (26%), Positives = 177/379 (46%), Gaps = 7/379 (1%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
+E F ++ Y ++GD + A ++ M + G + S VS ++ + + GR ++A
Sbjct: 223 DEKTFTTIMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFI 282
Query: 155 RRMQSS-GPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYM 213
+ M + G P T+ ++ +A K A E+ +L E PD ++ +I
Sbjct: 283 QEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQE---GYDPDVYTYNSVISG 339
Query: 214 YKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSF---ETNYKEVSKIYDQMQRAGLQPD 270
K G ++A + M R +TVTYN+L+S E +E +++ + G+ PD
Sbjct: 340 LCKLGEVKEAVEFLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPD 399
Query: 271 VVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFK 330
V ++ LI R A+ +FEEM G P YN+L+D+ G +D+A + K
Sbjct: 400 VCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLK 459
Query: 331 CMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVN 390
M C+ + +Y T++ + A+ + AE+ F ++ G N +TY TLI G K
Sbjct: 460 QMELSGCARSVITYNTLIDGFCKANKIREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSR 519
Query: 391 NLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKN 450
+E ++ D+M + G KP++ + +++ + + D A + M S G PD
Sbjct: 520 RVEDASQLMDQMIMEGQKPDKFTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYG 579
Query: 451 ILLSLAKTADERNEANELL 469
L+S A A++LL
Sbjct: 580 TLISGLCKAGRVEVASKLL 598
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 96/386 (24%), Positives = 172/386 (44%), Gaps = 5/386 (1%)
Query: 99 FLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQ 158
F +LI A + A +L M G P + T +M+ Y G A I +M
Sbjct: 192 FNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTIMQGYIEEGDLDGALRIREQMV 251
Query: 159 SSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAG 218
G S ++ +I+ F + + ++A + +++ PDQ F+ ++ KAG
Sbjct: 252 EFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDG--FFPDQYTFNTLVNGLCKAG 309
Query: 219 GYEKARKLFALMAERGVQQSTVTYNSLMSFETNY---KEVSKIYDQMQRAGLQPDVVSYA 275
+ A ++ +M + G TYNS++S KE + DQM P+ V+Y
Sbjct: 310 HVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEFLDQMITRDCSPNTVTYN 369
Query: 276 LLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRD 335
LI+ K + EEA + + G+ P +N L+ ++ A +F+ MR
Sbjct: 370 TLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSK 429
Query: 336 RCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKM 395
C PD +Y ++ + + ++ A ++++ G +VITY TLI G+ K N + +
Sbjct: 430 GCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKIREA 489
Query: 396 MEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSL 455
EI+D+M V+G+ N + T++D K++ + A +M G PD+ N LL+
Sbjct: 490 EEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDASQLMDQMIMEGQKPDKFTYNSLLTH 549
Query: 456 AKTADERNEANELLGNFNHPNNEPGI 481
+ +A +++ EP I
Sbjct: 550 FCRGGDIKKAADIVQAMTSNGCEPDI 575
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 82/342 (23%), Positives = 155/342 (45%), Gaps = 6/342 (1%)
Query: 99 FLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQ 158
F L+ K G A +++ M ++GY P V ++ +++ + G K A +M
Sbjct: 298 FNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEFLDQMI 357
Query: 159 SSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAG 218
+ P+ +TY ++ + N+ +EA E+ L + + PD F+ +I
Sbjct: 358 TRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSK---GILPDVCTFNSLIQGLCLTR 414
Query: 219 GYEKARKLFALMAERGVQQSTVTYNSL---MSFETNYKEVSKIYDQMQRAGLQPDVVSYA 275
+ A +LF M +G + TYN L + + E + QM+ +G V++Y
Sbjct: 415 NHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYN 474
Query: 276 LLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRD 335
LI+ + KA + EA +F+EM GV YN L+D S V+ A + M +
Sbjct: 475 TLIDGFCKANKIREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDASQLMDQMIME 534
Query: 336 RCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKM 395
PD +Y ++L+ + D++ A + + +G P+++TYGTLI G K +E
Sbjct: 535 GQKPDKFTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVA 594
Query: 396 MEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEM 437
++ +++ GI + ++ + + A+ ++EM
Sbjct: 595 SKLLRSIQMKGIALTPHAYNPVIQGLFRKRKTTEAINLFREM 636
Score = 105 bits (261), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 95/441 (21%), Positives = 166/441 (37%), Gaps = 73/441 (16%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKK-GYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSS 160
L+ + Q D + A ++ + +KK ++P + ++ GR G + + I M++S
Sbjct: 53 LLDSLRSQADDSAALRLFNLASKKPNFSPEPALYEEILLRLGRSGSFDDMRKILEDMKNS 112
Query: 161 GP------------------------------------RPSALTYQIILKLFVEANKFKE 184
G +P Y +L L V+ N K
Sbjct: 113 GCEMGTSPFLILIESYAQFELQDEILGVVHWMIDDFGLKPDTHFYNRMLNLLVDGNNLKL 172
Query: 185 AE--------------------------------EVFMTLLDEEKSPLKPDQKMFHMMIY 212
E + L D L PD+K F ++
Sbjct: 173 VEIAHAKMSVWGIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTIMQ 232
Query: 213 MYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSKIYDQMQRA----GLQ 268
Y + G + A ++ M E G S V+ N ++ V + +Q G
Sbjct: 233 GYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFF 292
Query: 269 PDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTV 328
PD ++ L+N KA + A+ + + ML G P YN ++ G V +A
Sbjct: 293 PDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEF 352
Query: 329 FKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAK 388
M CSP+ +Y T++S + +E A + R L G +P+V T+ +LI+G
Sbjct: 353 LDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCL 412
Query: 389 VNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKA 448
N ME++++MR G +P++ + ++D+ D A+ K+ME G
Sbjct: 413 TRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVIT 472
Query: 449 KNILLSLAKTADERNEANELL 469
N L+ A++ EA E+
Sbjct: 473 YNTLIDGFCKANKIREAEEIF 493
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/204 (22%), Positives = 89/204 (43%), Gaps = 10/204 (4%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
L+T + + GD KA ++ M G P +V++ L+ + GR + A + R +Q G
Sbjct: 546 LLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKG 605
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGG-Y 220
+ Y +++ K EA +F +L++ ++ PD + ++ GG
Sbjct: 606 IALTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEA--APDAVSYRIVFRGLCNGGGPI 663
Query: 221 EKARKLFALMAERG-VQQSTVTY---NSLMSFETNYKEVSKIYDQMQRAGLQPDVVSYAL 276
+A + E+G V + + Y L++ V + MQ+A + VS
Sbjct: 664 REAVDFLVELLEKGFVPEFSSLYMLAEGLLTLSMEETLVKLVNMVMQKARFSEEEVS--- 720
Query: 277 LINAYGKARREEEALAVFEEMLDA 300
++ K R+ ++ALA +LD+
Sbjct: 721 MVKGLLKIRKFQDALATLGGVLDS 744
>gi|410110147|gb|AFV61153.1| pentatricopeptide repeat-containing protein 123, partial [Phyla
nodiflora]
Length = 419
Score = 145 bits (365), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 98/388 (25%), Positives = 179/388 (46%), Gaps = 37/388 (9%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
LI K D++KA + S + G P + ++ A++ +G+ ++ A ++ M+++G
Sbjct: 35 LIELSRKLCDYSKAISIFSRLKXSGXXPDLXAYNAMINVFGKAKLFREARSLIXEMKTAG 94
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
P +Y +L ++VE KF EA VF + + D ++MI +Y + G +
Sbjct: 95 VMPXTTSYSTLLTMYVENXKFLEALSVFSEM---REXKCLXDLXTCNIMIDVYGQLGMAK 151
Query: 222 KARKLFALMAERGVQQSTVTYNSLMSFETN---YKEVSKIYDQMQRAGLQPDVVSYALLI 278
+A KLF M + G++ + V+YN+L+ + + E ++ MQR ++ +VV+Y +I
Sbjct: 152 EADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMI 211
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCS 338
YGK E+A + +EM G+ P Y+ ++ + G +D+A +F+ +R
Sbjct: 212 MIYGKTLEHEKANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVE 271
Query: 339 PDICSYTTMLSAY-------------------------------VNASDMEGAEKFFRRL 367
D + TM+ AY A +E A FR+
Sbjct: 272 IDQILFQTMIVAYERAGLVAHAKRLLHELKRPDNIPRDTAIHILAGAGRIEEATYVFRQA 331
Query: 368 KQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDF 427
G V ++ + +I +K ++E++DKMR G P+ + +++AYGK +F
Sbjct: 332 IDSGEVKDITVFERMIHLLSKYKKYMNVVEVFDKMRGLGYFPDSNVIAVVLNAYGKLHEF 391
Query: 428 DSAVVWYKEMESCGFPPDQKAKNILLSL 455
D A Y EM+ G + +LSL
Sbjct: 392 DKASDIYMEMQEVGCVFSDEVHFQMLSL 419
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 75/273 (27%), Positives = 130/273 (47%), Gaps = 3/273 (1%)
Query: 210 MIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSF---ETNYKEVSKIYDQMQRAG 266
+I + +K Y KA +F+ + G YN++++ ++E + +M+ AG
Sbjct: 35 LIELSRKLCDYSKAISIFSRLKXSGXXPDLXAYNAMINVFGKAKLFREARSLIXEMKTAG 94
Query: 267 LQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQAR 326
+ P SY+ L+ Y + + EAL+VF EM + NI++D + GM +A
Sbjct: 95 VMPXTTSYSTLLTMYVENXKFLEALSVFSEMREXKCLXDLXTCNIMIDVYGQLGMAKEAD 154
Query: 327 TVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGY 386
+F MR+ P++ SY T+L Y +A A FR +++ NV+TY ++I Y
Sbjct: 155 KLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMIMIY 214
Query: 387 AKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQ 446
K EK + +M+ GI+PN ++TI+ +GK D A + ++++ S G DQ
Sbjct: 215 GKTLEHEKANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQ 274
Query: 447 KAKNILLSLAKTADERNEANELLGNFNHPNNEP 479
++ + A A LL P+N P
Sbjct: 275 ILFQTMIVAYERAGLVAHAKRLLHELKRPDNIP 307
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/241 (24%), Positives = 111/241 (46%), Gaps = 37/241 (15%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + + L+ YG F +A + M +K +VV++ +++ YG+ ++ A +
Sbjct: 168 NVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMIMIYGKTLEHEKANNLI 227
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
+ MQS G P+++TY I+ ++ + K A +F L S ++ DQ +F MI Y
Sbjct: 228 QEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKL---RSSGVEIDQILFQTMIVAY 284
Query: 215 KKAGGYEKARKLF---------------ALMAERG-VQQSTVTYNS-------------- 244
++AG A++L ++A G ++++T +
Sbjct: 285 ERAGLVAHAKRLLHELKRPDNIPRDTAIHILAGAGRIEEATYVFRQAIDSGEVKDITVFE 344
Query: 245 ----LMSFETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDA 300
L+S Y V +++D+M+ G PD A+++NAYGK ++A ++ EM +
Sbjct: 345 RMIHLLSKYKKYMNVVEVFDKMRGLGYFPDSNVIAVVLNAYGKLHEFDKASDIYMEMQEV 404
Query: 301 G 301
G
Sbjct: 405 G 405
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 37/166 (22%), Positives = 66/166 (39%)
Query: 316 FAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPN 375
F G+ D A + + M D D+ + ++ D A F RLK G P+
Sbjct: 4 FGKEGLFDXALSWLQKMEXDXVPGDLVLXSNLIELSRKLCDYSKAISIFSRLKXSGXXPD 63
Query: 376 VITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYK 435
+ Y +I + K + + +M+ G+ P T ++T++ Y +N F A+ +
Sbjct: 64 LXAYNAMINVFGKAKLFREARSLIXEMKTAGVMPXTTSYSTLLTMYVENXKFLEALSVFS 123
Query: 436 EMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGI 481
EM D NI++ + EA++L EP +
Sbjct: 124 EMREXKCLXDLXTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNV 169
>gi|47550658|dbj|BAD20284.1| hypothetical protein [Oryza sativa Indica Group]
Length = 791
Score = 145 bits (365), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 104/401 (25%), Positives = 187/401 (46%), Gaps = 13/401 (3%)
Query: 63 VLGTLVRLKQLKKWNVVSEVLEWLRIQS-----WWDFNEMDFLMLITAYGKQGDFNKAEK 117
V + LK L N E LE L + + + + + +I + K+GD +KA
Sbjct: 158 VFSCTILLKGLCDENRSQEALELLHMMADDRGGGSAPDVVSYTTVINGFFKEGDSDKAYS 217
Query: 118 VLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFV 177
M + +P VV++++++ A +G A + M +G P+ +TY IL +
Sbjct: 218 TYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEVLTTMVKNGVMPNCMTYNSILHGYC 277
Query: 178 EANKFKEAEEVFMTLLDEEKS-PLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQ 236
+ + KEA + L + +S ++PD ++ ++ K G +ARK+F M +RG++
Sbjct: 278 SSEQPKEA----IGFLKKMRSDGVEPDVVTYNSLMDYLCKNGRSTEARKIFDSMTKRGLE 333
Query: 237 QSTVTYNSLM---SFETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAV 293
TY +L+ + + E+ + D M R G+ PD + +LI AY K + +EA+ V
Sbjct: 334 PDIATYCTLLQGYATKGALVEMHALLDLMVRNGIHPDHHVFNILICAYAKQEKVDEAMLV 393
Query: 294 FEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVN 353
F +M G+ P Y ++ SG VD A F+ M + +P+I YT+++ +
Sbjct: 394 FSKMRQHGLNPNVVTYGAVIGILCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHSLCI 453
Query: 354 ASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTI 413
+ AE+ + G N I + ++I + K + + +++D M G+KPN
Sbjct: 454 FDKWDKAEELILEMLDRGICLNTIFFNSIIHSHCKEGRVIESEKLFDLMVRIGVKPNVIT 513
Query: 414 FTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLS 454
++T++D Y D A M S G PD N L++
Sbjct: 514 YSTLIDGYCLAGKMDEATKLLSSMFSVGMKPDCVTYNTLIN 554
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 95/378 (25%), Positives = 175/378 (46%), Gaps = 12/378 (3%)
Query: 111 DFNKAEKVLSFMNKK------GYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRP 164
D N++++ L ++ G AP VVS+T ++ + + G A + + M P
Sbjct: 170 DENRSQEALELLHMMADDRGGGSAPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRRISP 229
Query: 165 SALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKAR 224
+TY I+ + +A EV T++ K+ + P+ ++ +++ Y + ++A
Sbjct: 230 DVVTYSSIIAALCKGQAMDKAMEVLTTMV---KNGVMPNCMTYNSILHGYCSSEQPKEAI 286
Query: 225 KLFALMAERGVQQSTVTYNSLMSFETN---YKEVSKIYDQMQRAGLQPDVVSYALLINAY 281
M GV+ VTYNSLM + E KI+D M + GL+PD+ +Y L+ Y
Sbjct: 287 GFLKKMRSDGVEPDVVTYNSLMDYLCKNGRSTEARKIFDSMTKRGLEPDIATYCTLLQGY 346
Query: 282 GKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDI 341
E A+ + M+ G+ P H +NIL+ A+A VD+A VF MR+ +P++
Sbjct: 347 ATKGALVEMHALLDLMVRNGIHPDHHVFNILICAYAKQEKVDEAMLVFSKMRQHGLNPNV 406
Query: 342 CSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDK 401
+Y ++ + ++ A +F ++ +G PN+I Y +LI + +K E+ +
Sbjct: 407 VTYGAVIGILCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHSLCIFDKWDKAEELILE 466
Query: 402 MRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADE 461
M GI N F +I+ ++ K + + M G P+ + L+ A +
Sbjct: 467 MLDRGICLNTIFFNSIIHSHCKEGRVIESEKLFDLMVRIGVKPNVITYSTLIDGYCLAGK 526
Query: 462 RNEANELLGNFNHPNNEP 479
+EA +LL + +P
Sbjct: 527 MDEATKLLSSMFSVGMKP 544
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 89/390 (22%), Positives = 171/390 (43%), Gaps = 41/390 (10%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
+I A K +KA +VL+ M K G P+ +++ +++ Y + K A ++M+S G
Sbjct: 237 IIAALCKGQAMDKAMEVLTTMVKNGVMPNCMTYNSILHGYCSSEQPKEAIGFLKKMRSDG 296
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
P +TY ++ + + EA ++F ++ K L+PD + ++ Y G
Sbjct: 297 VEPDVVTYNSLMDYLCKNGRSTEARKIFDSM---TKRGLEPDIATYCTLLQGYATKGALV 353
Query: 222 KARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSK---IYDQMQRAGLQPDVVSYALLI 278
+ L LM G+ +N L+ ++V + ++ +M++ GL P+VV+Y +I
Sbjct: 354 EMHALLDLMVRNGIHPDHHVFNILICAYAKQEKVDEAMLVFSKMRQHGLNPNVVTYGAVI 413
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAI-------------------- 318
K+ ++A+ FE+M+D G+ P Y L+ + I
Sbjct: 414 GILCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHSLCIFDKWDKAEELILEMLDRGIC 473
Query: 319 ---------------SGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKF 363
G V ++ +F M R P++ +Y+T++ Y A M+ A K
Sbjct: 474 LNTIFFNSIIHSHCKEGRVIESEKLFDLMVRIGVKPNVITYSTLIDGYCLAGKMDEATKL 533
Query: 364 FRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGK 423
+ G P+ +TY TLI GY +V+ ++ + ++ +M +G+ PN + I+
Sbjct: 534 LSSMFSVGMKPDCVTYNTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFH 593
Query: 424 NKDFDSAVVWYKEMESCGFPPDQKAKNILL 453
+ +A Y + G + NI+L
Sbjct: 594 TRRTAAAKELYVGITKSGTQLELSTYNIIL 623
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 85/386 (22%), Positives = 169/386 (43%), Gaps = 12/386 (3%)
Query: 97 MDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRR 156
MD+L K G +A K+ M K+G P + ++ L++ Y G A+
Sbjct: 308 MDYLC------KNGRSTEARKIFDSMTKRGLEPDIATYCTLLQGYATKGALVEMHALLDL 361
Query: 157 MQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKK 216
M +G P + I++ + + K EA VF + + L P+ + +I + K
Sbjct: 362 MVRNGIHPDHHVFNILICAYAKQEKVDEAMLVFSKM---RQHGLNPNVVTYGAVIGILCK 418
Query: 217 AGGYEKARKLFALMAERGVQQSTVTYNSL---MSFETNYKEVSKIYDQMQRAGLQPDVVS 273
+G + A F M + G+ + + Y SL + + + ++ +M G+ + +
Sbjct: 419 SGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHSLCIFDKWDKAEELILEMLDRGICLNTIF 478
Query: 274 YALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMR 333
+ +I+++ K R E+ +F+ M+ GV+P Y+ L+D + ++G +D+A + M
Sbjct: 479 FNSIIHSHCKEGRVIESEKLFDLMVRIGVKPNVITYSTLIDGYCLAGKMDEATKLLSSMF 538
Query: 334 RDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLE 393
PD +Y T+++ Y S M+ A F+ + G PN+ITY +++G
Sbjct: 539 SVGMKPDCVTYNTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTA 598
Query: 394 KMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILL 453
E+Y + +G + + + I+ KN D A+ ++ + + + NI++
Sbjct: 599 AAKELYVGITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMI 658
Query: 454 SLAKTADERNEANELLGNFNHPNNEP 479
+EA +L F+ P
Sbjct: 659 GALLKVGRNDEAKDLFVAFSSNGLVP 684
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 87/346 (25%), Positives = 148/346 (42%), Gaps = 33/346 (9%)
Query: 101 MLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNA-EAIFRRMQS 159
+LI + G + L + KKG+ ++ T L++ R +A + + RRM
Sbjct: 92 ILIGCCCRAGRLDLGFAALGNVVKKGFRVEAITFTPLLKGLCADKRTSDAMDIVLRRMTE 151
Query: 160 SGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGG 219
P + I+LK + N+ +EA E+ + D+ PD + +I + K G
Sbjct: 152 LSCMPDVFSCTILLKGLCDENRSQEALELLHMMADDRGGGSAPDVVSYTTVINGFFKEGD 211
Query: 220 YEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSKIYDQMQRAGLQPDVVSYALLIN 279
+KA + M +R + PDVV+Y+ +I
Sbjct: 212 SDKAYSTYHEMLDRRIS--------------------------------PDVVTYSSIIA 239
Query: 280 AYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSP 339
A K + ++A+ V M+ GV P YN +L + S +A K MR D P
Sbjct: 240 ALCKGQAMDKAMEVLTTMVKNGVMPNCMTYNSILHGYCSSEQPKEAIGFLKKMRSDGVEP 299
Query: 340 DICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIY 399
D+ +Y +++ A K F + + G P++ TY TL++GYA L +M +
Sbjct: 300 DVVTYNSLMDYLCKNGRSTEARKIFDSMTKRGLEPDIATYCTLLQGYATKGALVEMHALL 359
Query: 400 DKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPD 445
D M NGI P+ +F ++ AY K + D A++ + +M G P+
Sbjct: 360 DLMVRNGIHPDHHVFNILICAYAKQEKVDEAMLVFSKMRQHGLNPN 405
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 80/350 (22%), Positives = 161/350 (46%), Gaps = 6/350 (1%)
Query: 99 FLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQ 158
+ L+ Y +G + +L M + G P L+ AY + + A +F +M+
Sbjct: 339 YCTLLQGYATKGALVEMHALLDLMVRNGIHPDHHVFNILICAYAKQEKVDEAMLVFSKMR 398
Query: 159 SSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAG 218
G P+ +TY ++ + ++ +A F ++DE L P+ ++ +I+
Sbjct: 399 QHGLNPNVVTYGAVIGILCKSGSVDDAMLYFEQMIDE---GLTPNIIVYTSLIHSLCIFD 455
Query: 219 GYEKARKLFALMAERGVQQSTVTYNSLMSF---ETNYKEVSKIYDQMQRAGLQPDVVSYA 275
++KA +L M +RG+ +T+ +NS++ E E K++D M R G++P+V++Y+
Sbjct: 456 KWDKAEELILEMLDRGICLNTIFFNSIIHSHCKEGRVIESEKLFDLMVRIGVKPNVITYS 515
Query: 276 LLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRD 335
LI+ Y A + +EA + M G++P YN L++ + +D A +FK M
Sbjct: 516 TLIDGYCLAGKMDEATKLLSSMFSVGMKPDCVTYNTLINGYCRVSRMDDALALFKEMVSS 575
Query: 336 RCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKM 395
SP+I +Y +L + A++ + + + G + TY ++ G K N ++
Sbjct: 576 GVSPNIITYNIILQGLFHTRRTAAAKELYVGITKSGTQLELSTYNIILHGLCKNNLTDEA 635
Query: 396 MEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPD 445
+ ++ + + ++ F ++ A K D A + S G P+
Sbjct: 636 LRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFVAFSSNGLVPN 685
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 89/358 (24%), Positives = 162/358 (45%), Gaps = 41/358 (11%)
Query: 99 FLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQ 158
F +LI AY KQ ++A V S M + G P+VV++ A++ + G +A F +M
Sbjct: 374 FNILICAYAKQEKVDEAMLVFSKMRQHGLNPNVVTYGAVIGILCKSGSVDDAMLYFEQMI 433
Query: 159 SSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAG 218
G P+ + Y ++ +K+ +AEE+ + +LD + + F+ +I+ + K G
Sbjct: 434 DEGLTPNIIVYTSLIHSLCIFDKWDKAEELILEMLDR---GICLNTIFFNSIIHSHCKEG 490
Query: 219 GYEKARKLFALMAERGVQQSTVTYNSLM---SFETNYKEVSKIYDQMQRAGLQPDVVSYA 275
++ KLF LM GV+ + +TY++L+ E +K+ M G++PD V+Y
Sbjct: 491 RVIESEKLFDLMVRIGVKPNVITYSTLIDGYCLAGKMDEATKLLSSMFSVGMKPDCVTYN 550
Query: 276 LLINAYGKARREEEALAVFEEMLDAGVRPT------------H----------------- 306
LIN Y + R ++ALA+F+EM+ +GV P H
Sbjct: 551 TLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVGITKS 610
Query: 307 ------KAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGA 360
YNI+L + + D+A +F+ + + ++ M+ A + + A
Sbjct: 611 GTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEA 670
Query: 361 EKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIM 418
+ F +G VPN TY + + LE++ +++ M NG + + I+
Sbjct: 671 KDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFFSMEDNGCTVDSGMLNFIV 728
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 73/305 (23%), Positives = 126/305 (41%), Gaps = 44/305 (14%)
Query: 221 EKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSKI--YDQMQRAG---LQPDVVSYA 275
E AR +F + RG S N ++ + + + Y++M RAG + P V +Y
Sbjct: 32 EDARHVFDELLRRGRGASIYGLNRALADVARHSPAAAVSRYNRMARAGAGKVTPTVHTYG 91
Query: 276 LLINAYGKARREEEALAVFEEMLDAGVRP-----------------THKAYNILL----- 313
+LI +A R + A ++ G R T A +I+L
Sbjct: 92 ILIGCCCRAGRLDLGFAALGNVVKKGFRVEAITFTPLLKGLCADKRTSDAMDIVLRRMTE 151
Query: 314 -----DAFAIS----GMVDQART-----VFKCMRRDR---CSPDICSYTTMLSAYVNASD 356
D F+ + G+ D+ R+ + M DR +PD+ SYTT+++ + D
Sbjct: 152 LSCMPDVFSCTILLKGLCDENRSQEALELLHMMADDRGGGSAPDVVSYTTVINGFFKEGD 211
Query: 357 MEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTT 416
+ A + + P+V+TY ++I K ++K ME+ M NG+ PN + +
Sbjct: 212 SDKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEVLTTMVKNGVMPNCMTYNS 271
Query: 417 IMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPN 476
I+ Y ++ A+ + K+M S G PD N L+ EA ++ +
Sbjct: 272 ILHGYCSSEQPKEAIGFLKKMRSDGVEPDVVTYNSLMDYLCKNGRSTEARKIFDSMTKRG 331
Query: 477 NEPGI 481
EP I
Sbjct: 332 LEPDI 336
>gi|302775294|ref|XP_002971064.1| hypothetical protein SELMODRAFT_95253 [Selaginella moellendorffii]
gi|300161046|gb|EFJ27662.1| hypothetical protein SELMODRAFT_95253 [Selaginella moellendorffii]
Length = 814
Score = 145 bits (365), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 98/385 (25%), Positives = 173/385 (44%), Gaps = 9/385 (2%)
Query: 124 KKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFK 183
+ G+ V ++ LM Y AI M +G P+ ++ I+++ F +
Sbjct: 112 QAGFQHDVFTYNCLMNLLVAEKNYSQCYAIHEEMLKAGIAPNTFSFNILIRSFARTRRAD 171
Query: 184 EAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGV-----QQS 238
+A F + ++ KPD F +++ KAG EKA ++F M G
Sbjct: 172 DAVTCFEIM---KRKRCKPDLHTFLILVDCLCKAGMDEKAFEVFHEMMAMGFVPPDRALH 228
Query: 239 TVTYNSLMSFETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEML 298
T +L+ + KE +++ QM++ G PD ++Y +I+ KA +EAL V + ML
Sbjct: 229 TAMVRTLLKAK-RVKEAREVFGQMEKCGFPPDAIAYNTMIDGLAKAGHAQEALKVLDNML 287
Query: 299 DAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDME 358
PT Y IL+++ +G +++A +F+ M P+ YT+++ + + M+
Sbjct: 288 AKACVPTEVTYGILVNSLCKAGTLERAEELFRVMAASGFRPNSVIYTSLIHGFAKSGRMK 347
Query: 359 GAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIM 418
A F + + G+ P+VIT+ +I G K N E+ + +++M G KPN +TTI+
Sbjct: 348 EACSLFDEMVEAGYRPDVITHTVMIDGLCKSGNFEQAAKSFEEMMRGGCKPNVVTYTTII 407
Query: 419 DAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNE 478
K +A K M + G PD LL +EA +LL + ++
Sbjct: 408 QGLSKIGRVANAFRIMKGMIAHGCFPDSVTYICLLDGFCKLGRLDEAAQLLDELDKCSSS 467
Query: 479 PGINGLSISVDEEDDDDDDDEDDDD 503
P + S V+ D ++ DD
Sbjct: 468 PNLQLYSSLVNGLCDGGSVEKTLDD 492
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 104/456 (22%), Positives = 200/456 (43%), Gaps = 52/456 (11%)
Query: 66 TLVRLKQLKKWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKK 125
TL++ K++K+ V +E + + + + + +I K G +A KVL M K
Sbjct: 234 TLLKAKRVKEAREVFGQME----KCGFPPDAIAYNTMIDGLAKAGHAQEALKVLDNMLAK 289
Query: 126 GYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEA 185
P+ V++ L+ + + G + AE +FR M +SG RP+++ Y ++ F ++ + KEA
Sbjct: 290 ACVPTEVTYGILVNSLCKAGTLERAEELFRVMAASGFRPNSVIYTSLIHGFAKSGRMKEA 349
Query: 186 EEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSL 245
+F +++ + +PD +MI K+G +E+A K F M G + + VTY ++
Sbjct: 350 CSLFDEMVE---AGYRPDVITHTVMIDGLCKSGNFEQAAKSFEEMMRGGCKPNVVTYTTI 406
Query: 246 MSFETNYKEVS---KIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGV 302
+ + V+ +I M G PD V+Y L++ + K R +EA + +E+
Sbjct: 407 IQGLSKIGRVANAFRIMKGMIAHGCFPDSVTYICLLDGFCKLGRLDEAAQLLDELDKCSS 466
Query: 303 RPTHKAYNILLDAFAISGMV------------------------------------DQAR 326
P + Y+ L++ G V D+A
Sbjct: 467 SPNLQLYSSLVNGLCDGGSVEKTLDDLFEQSKAAAETLDPGLCCSIIVGLCKTGRLDEAC 526
Query: 327 TVFKCMRRDRCSPDICSYTTMLSAYVNASD--MEGAEKFFRRLKQDGFVPNVITYGTLIK 384
+F+ M + C PD +Y +++ + + +E A L++ G++P+ +TY L
Sbjct: 527 RIFQRMVSEGCKPDATTYNILINGLCRSRENRVERAFALLHDLEKVGYLPDAVTYTPLCI 586
Query: 385 GYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPP 444
G K+ +++ +++ ++ G + +T + D AV ++EM G P
Sbjct: 587 GLCKIGEVDRAVKMLEEASSRGWNADVVAYTALCTGLCYQGQVDRAVSLFQEMVRQGGAP 646
Query: 445 DQKAK----NILLSLAKTADERNEANELLGNFNHPN 476
D A N L+ + K D +E++G P
Sbjct: 647 DAAAYCCIINGLIKVKKLEDACKFFDEMIGKGQKPT 682
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 80/294 (27%), Positives = 130/294 (44%), Gaps = 5/294 (1%)
Query: 135 TALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLD 194
+++ + GR A IF+RM S G +P A TY I++ + + E F L D
Sbjct: 510 CSIIVGLCKTGRLDEACRIFQRMVSEGCKPDATTYNILINGLCRSRE-NRVERAFALLHD 568
Query: 195 EEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSL---MSFETN 251
EK PD + + K G ++A K+ + RG V Y +L + ++
Sbjct: 569 LEKVGYLPDAVTYTPLCIGLCKIGEVDRAVKMLEEASSRGWNADVVAYTALCTGLCYQGQ 628
Query: 252 YKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNI 311
++ +M R G PD +Y +IN K ++ E+A F+EM+ G +PT Y
Sbjct: 629 VDRAVSLFQEMVRQGGAPDAAAYCCIINGLIKVKKLEDACKFFDEMIGKGQKPTVATYTA 688
Query: 312 LLDAFAISGMVDQARTVFKCM-RRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQD 370
L+ A +G VD+A F+ M R + Y ++ + A ++ A K F +
Sbjct: 689 LVQALCHAGNVDEAFHRFESMLARGELVGSVMIYDALIHGFCKALKVDAALKLFEDMISR 748
Query: 371 GFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKN 424
G VP +T +L G + EK E+ +M G P+ FT I+D K+
Sbjct: 749 GNVPTAVTSASLFDGLVRSGKTEKAQELLQEMAAGGSPPHAATFTAILDGLRKS 802
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 97/422 (22%), Positives = 171/422 (40%), Gaps = 47/422 (11%)
Query: 101 MLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSS 160
++I K G+F +A K M + G P+VV++T +++ + GR NA I + M +
Sbjct: 370 VMIDGLCKSGNFEQAAKSFEEMMRGGCKPNVVTYTTIIQGLSKIGRVANAFRIMKGMIAH 429
Query: 161 GPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDE-EKSPLKPDQKMFHMMIYMYKKAGG 219
G P ++TY +L F + + EA + LLDE +K P+ +++ ++ G
Sbjct: 430 GCFPDSVTYICLLDGFCKLGRLDEAAQ----LLDELDKCSSSPNLQLYSSLVNGLCDGGS 485
Query: 220 YEK------------------------------------ARKLFALMAERGVQQSTVTYN 243
EK A ++F M G + TYN
Sbjct: 486 VEKTLDDLFEQSKAAAETLDPGLCCSIIVGLCKTGRLDEACRIFQRMVSEGCKPDATTYN 545
Query: 244 SLM-----SFETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEML 298
L+ S E + + +++ G PD V+Y L K + A+ + EE
Sbjct: 546 ILINGLCRSRENRVERAFALLHDLEKVGYLPDAVTYTPLCIGLCKIGEVDRAVKMLEEAS 605
Query: 299 DAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDME 358
G AY L G VD+A ++F+ M R +PD +Y +++ + +E
Sbjct: 606 SRGWNADVVAYTALCTGLCYQGQVDRAVSLFQEMVRQGGAPDAAAYCCIINGLIKVKKLE 665
Query: 359 GAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNG-IKPNQTIFTTI 417
A KFF + G P V TY L++ N+++ ++ M G + + I+ +
Sbjct: 666 DACKFFDEMIGKGQKPTVATYTALVQALCHAGNVDEAFHRFESMLARGELVGSVMIYDAL 725
Query: 418 MDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNN 477
+ + K D+A+ +++M S G P L + + +A ELL +
Sbjct: 726 IHGFCKALKVDAALKLFEDMISRGNVPTAVTSASLFDGLVRSGKTEKAQELLQEMAAGGS 785
Query: 478 EP 479
P
Sbjct: 786 PP 787
Score = 98.2 bits (243), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 61/263 (23%), Positives = 113/263 (42%), Gaps = 36/263 (13%)
Query: 263 QRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMV 322
++AG Q DV +Y L+N + + A+ EEML AG+ P ++NIL+ +FA +
Sbjct: 111 EQAGFQHDVFTYNCLMNLLVAEKNYSQCYAIHEEMLKAGIAPNTFSFNILIRSFARTRRA 170
Query: 323 DQARTVFKCMRRDRCSPDICSY------------------------------------TT 346
D A T F+ M+R RC PD+ ++ T
Sbjct: 171 DDAVTCFEIMKRKRCKPDLHTFLILVDCLCKAGMDEKAFEVFHEMMAMGFVPPDRALHTA 230
Query: 347 MLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNG 406
M+ + A ++ A + F ++++ GF P+ I Y T+I G AK + ++ +++ D M
Sbjct: 231 MVRTLLKAKRVKEAREVFGQMEKCGFPPDAIAYNTMIDGLAKAGHAQEALKVLDNMLAKA 290
Query: 407 IKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEAN 466
P + + ++++ K + A ++ M + GF P+ L+ + EA
Sbjct: 291 CVPTEVTYGILVNSLCKAGTLERAEELFRVMAASGFRPNSVIYTSLIHGFAKSGRMKEAC 350
Query: 467 ELLGNFNHPNNEPGINGLSISVD 489
L P + ++ +D
Sbjct: 351 SLFDEMVEAGYRPDVITHTVMID 373
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/208 (20%), Positives = 90/208 (43%), Gaps = 5/208 (2%)
Query: 92 WDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAE 151
W+ + + + L T QG ++A + M ++G AP ++ ++ + + ++A
Sbjct: 609 WNADVVAYTALCTGLCYQGQVDRAVSLFQEMVRQGGAPDAAAYCCIINGLIKVKKLEDAC 668
Query: 152 AIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMI 211
F M G +P+ TY +++ A EA F ++L + L ++ +I
Sbjct: 669 KFFDEMIGKGQKPTVATYTALVQALCHAGNVDEAFHRFESML--ARGELVGSVMIYDALI 726
Query: 212 YMYKKAGGYEKARKLFALMAERGVQQSTVTYNSL---MSFETNYKEVSKIYDQMQRAGLQ 268
+ + KA + A KLF M RG + VT SL + ++ ++ +M G
Sbjct: 727 HGFCKALKVDAALKLFEDMISRGNVPTAVTSASLFDGLVRSGKTEKAQELLQEMAAGGSP 786
Query: 269 PDVVSYALLINAYGKARREEEALAVFEE 296
P ++ +++ K+ + L + +E
Sbjct: 787 PHAATFTAILDGLRKSDESGKLLKLVQE 814
>gi|414872432|tpg|DAA50989.1| TPA: hypothetical protein ZEAMMB73_390723 [Zea mays]
Length = 604
Score = 145 bits (365), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 107/453 (23%), Positives = 207/453 (45%), Gaps = 44/453 (9%)
Query: 33 RLMNQIEEVGSAVAVLRSERTR-GQPLPKDLVLGTLVRLKQLKKWNVVSEVLEWLRIQSW 91
R++ + V A+ + +TR QP+ + ++ L ++ V ++ + +
Sbjct: 134 RMLGNAKMVRQAITIFYQIKTRKCQPIAQAYN-SMIIMLMHEGQYEKVHQLYNEMSTEGH 192
Query: 92 WDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAE 151
+ + + LI+A+ K G + A ++L+ M + G P+ +T L+ + + A
Sbjct: 193 CFPDTVTYSALISAFCKLGRRDSAIQLLNEMKEIGMQPTTKIYTMLIALFFKFNDAHGAL 252
Query: 152 AIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMI 211
++F M+ RP TY +++ +A + EA F + ++ +PD + MI
Sbjct: 253 SLFEEMRHQYCRPDVFTYTELIRGLGKAGRIDEAYHFFCEM---QREGCRPDTVFMNNMI 309
Query: 212 YMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMS--FETNYK--EVSKIYDQMQRAGL 267
KAG + A KLF M S VTYN+++ FE+ + EV +++M+ +G+
Sbjct: 310 NFLGKAGRLDDAMKLFQEMETLRCIPSVVTYNTIIKALFESKSRASEVPSWFERMKESGI 369
Query: 268 QPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDA------------ 315
P +Y++LI+ + K R E+A+ + EEM + G P AY L+DA
Sbjct: 370 SPSSFTYSILIDGFCKTNRMEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLACE 429
Query: 316 ----------------FAI-------SGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYV 352
+A+ +G +D A +F M + C+PD+ +Y ++S
Sbjct: 430 LFQELKENCGSSSARVYAVMIKHLGKAGRLDDAINMFDEMNKLGCAPDVYAYNALMSGLA 489
Query: 353 NASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQT 412
++ A RR+++ G +P++ +Y ++ G AK + ME+ M+ + ++P+
Sbjct: 490 RTGMLDEALSTMRRMQEHGCIPDINSYNIILNGLAKTGGPHRAMEMLSNMKQSTVRPDVV 549
Query: 413 IFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPD 445
+ T++ A F+ A KEM + GF D
Sbjct: 550 SYNTVLGALSHAGMFEEASKLMKEMNTLGFEYD 582
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 94/386 (24%), Positives = 181/386 (46%), Gaps = 10/386 (2%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYA-PSVVSHTALMEAYGRGGRYKNAEAIFRRMQSS 160
+I +G + K ++ + M+ +G+ P V+++AL+ A+ + GR +A + M+
Sbjct: 167 MIIMLMHEGQYEKVHQLYNEMSTEGHCFPDTVTYSALISAFCKLGRRDSAIQLLNEMKEI 226
Query: 161 GPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGY 220
G +P+ Y +++ LF KF +A + +PD + +I KAG
Sbjct: 227 GMQPTTKIYTMLIALFF---KFNDAHGALSLFEEMRHQYCRPDVFTYTELIRGLGKAGRI 283
Query: 221 EKARKLFALMAERGVQQSTVTYNSLMSF---ETNYKEVSKIYDQMQRAGLQPDVVSYALL 277
++A F M G + TV N++++F + K++ +M+ P VV+Y +
Sbjct: 284 DEAYHFFCEMQREGCRPDTVFMNNMINFLGKAGRLDDAMKLFQEMETLRCIPSVVTYNTI 343
Query: 278 INAYGKAR-REEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDR 336
I A +++ R E + FE M ++G+ P+ Y+IL+D F + +++A + + M
Sbjct: 344 IKALFESKSRASEVPSWFERMKESGISPSSFTYSILIDGFCKTNRMEKAMMLLEEMDEKG 403
Query: 337 CSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMM 396
P +Y +++ A A + A + F+ LK++ + Y +IK K L+ +
Sbjct: 404 FPPCPAAYCSLIDALGKAKRYDLACELFQELKENCGSSSARVYAVMIKHLGKAGRLDDAI 463
Query: 397 EIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLS-L 455
++D+M G P+ + +M + D A+ + M+ G PD + NI+L+ L
Sbjct: 464 NMFDEMNKLGCAPDVYAYNALMSGLARTGMLDEALSTMRRMQEHGCIPDINSYNIILNGL 523
Query: 456 AKTADERNEANELLGNFNHPNNEPGI 481
AKT + A E+L N P +
Sbjct: 524 AKTGGP-HRAMEMLSNMKQSTVRPDV 548
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 109/456 (23%), Positives = 198/456 (43%), Gaps = 48/456 (10%)
Query: 77 NVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTA 136
NV + W + ++ + ++ LI + + K++ M + VV+ T
Sbjct: 71 NVKMQFFRWAAKRRNYEHDTSTYMALIHCLEVVEQYGEMWKMIQEMVRNPIC--VVTPTE 128
Query: 137 L---MEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLL 193
L + G + A IF ++++ +P A Y ++ + + ++++ +++ +
Sbjct: 129 LSDVVRMLGNAKMVRQAITIFYQIKTRKCQPIAQAYNSMIIMLMHEGQYEKVHQLYNEMS 188
Query: 194 DEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYK 253
E PD + +I + K G + A +L M E G+Q +T Y L++ +
Sbjct: 189 TEGHC--FPDTVTYSALISAFCKLGRRDSAIQLLNEMKEIGMQPTTKIYTMLIALFFKFN 246
Query: 254 EVS---KIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYN 310
+ ++++M+ +PDV +Y LI GKA R +EA F EM G RP N
Sbjct: 247 DAHGALSLFEEMRHQYCRPDVFTYTELIRGLGKAGRIDEAYHFFCEMQREGCRPDTVFMN 306
Query: 311 ILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSA-YVNASDMEGAEKFFRRLKQ 369
+++ +G +D A +F+ M RC P + +Y T++ A + + S +F R+K+
Sbjct: 307 NMINFLGKAGRLDDAMKLFQEMETLRCIPSVVTYNTIIKALFESKSRASEVPSWFERMKE 366
Query: 370 DGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDS 429
G P+ TY LI G+ K N +EK M + ++M G P + +++DA GK K +D
Sbjct: 367 SGISPSSFTYSILIDGFCKTNRMEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDL 426
Query: 430 AVVWYKEM-ESCG----------------------------------FPPDQKAKNILLS 454
A ++E+ E+CG PD A N L+S
Sbjct: 427 ACELFQELKENCGSSSARVYAVMIKHLGKAGRLDDAINMFDEMNKLGCAPDVYAYNALMS 486
Query: 455 -LAKTADERNEANELLGNFNHPNNEPGINGLSISVD 489
LA+T +EA + P IN +I ++
Sbjct: 487 GLARTG-MLDEALSTMRRMQEHGCIPDINSYNIILN 521
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 85/325 (26%), Positives = 150/325 (46%), Gaps = 5/325 (1%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
LI GK G ++A M ++G P V ++ G+ GR +A +F+ M++
Sbjct: 273 LIRGLGKAGRIDEAYHFFCEMQREGCRPDTVFMNNMINFLGKAGRLDDAMKLFQEMETLR 332
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
PS +TY I+K E+ A EV ++S + P + ++I + K E
Sbjct: 333 CIPSVVTYNTIIKALFESKS--RASEVPSWFERMKESGISPSSFTYSILIDGFCKTNRME 390
Query: 222 KARKLFALMAERGVQQSTVTYNSL---MSFETNYKEVSKIYDQMQRAGLQPDVVSYALLI 278
KA L M E+G Y SL + Y +++ +++ YA++I
Sbjct: 391 KAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLACELFQELKENCGSSSARVYAVMI 450
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCS 338
GKA R ++A+ +F+EM G P AYN L+ A +GM+D+A + + M+ C
Sbjct: 451 KHLGKAGRLDDAINMFDEMNKLGCAPDVYAYNALMSGLARTGMLDEALSTMRRMQEHGCI 510
Query: 339 PDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEI 398
PDI SY +L+ A + +KQ P+V++Y T++ + E+ ++
Sbjct: 511 PDINSYNIILNGLAKTGGPHRAMEMLSNMKQSTVRPDVVSYNTVLGALSHAGMFEEASKL 570
Query: 399 YDKMRVNGIKPNQTIFTTIMDAYGK 423
+M G + + +++I++A GK
Sbjct: 571 MKEMNTLGFEYDLITYSSILEAIGK 595
Score = 118 bits (295), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 81/295 (27%), Positives = 142/295 (48%), Gaps = 9/295 (3%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEA-YGRGGRYKNAEAIFRRMQSS 160
+I GK G + A K+ M PSVV++ +++A + R + F RM+ S
Sbjct: 308 MINFLGKAGRLDDAMKLFQEMETLRCIPSVVTYNTIIKALFESKSRASEVPSWFERMKES 367
Query: 161 GPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDE-EKSPLKPDQKMFHMMIYMYKKAGG 219
G PS+ TY I++ F + N+ ++A M LL+E ++ P + +I KA
Sbjct: 368 GISPSSFTYSILIDGFCKTNRMEKA----MMLLEEMDEKGFPPCPAAYCSLIDALGKAKR 423
Query: 220 YEKARKLFALMAERGVQQSTVTYNSLMSF---ETNYKEVSKIYDQMQRAGLQPDVVSYAL 276
Y+ A +LF + E S Y ++ + ++D+M + G PDV +Y
Sbjct: 424 YDLACELFQELKENCGSSSARVYAVMIKHLGKAGRLDDAINMFDEMNKLGCAPDVYAYNA 483
Query: 277 LINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDR 336
L++ + +EAL+ M + G P +YNI+L+ A +G +A + M++
Sbjct: 484 LMSGLARTGMLDEALSTMRRMQEHGCIPDINSYNIILNGLAKTGGPHRAMEMLSNMKQST 543
Query: 337 CSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNN 391
PD+ SY T+L A +A E A K + + GF ++ITY ++++ KV++
Sbjct: 544 VRPDVVSYNTVLGALSHAGMFEEASKLMKEMNTLGFEYDLITYSSILEAIGKVDH 598
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 59/245 (24%), Positives = 114/245 (46%), Gaps = 37/245 (15%)
Query: 80 SEVLEWLR--IQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTAL 137
SEV W +S + + +LI + K KA +L M++KG+ P ++ +L
Sbjct: 355 SEVPSWFERMKESGISPSSFTYSILIDGFCKTNRMEKAMMLLEEMDEKGFPPCPAAYCSL 414
Query: 138 MEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILK-------------LFVEANKFKE 184
++A G+ RY A +F+ ++ + SA Y +++K +F E NK
Sbjct: 415 IDALGKAKRYDLACELFQELKENCGSSSARVYAVMIKHLGKAGRLDDAINMFDEMNKLGC 474
Query: 185 AEEVF-----------MTLLDEEKSPLK--------PDQKMFHMMIYMYKKAGGYEKARK 225
A +V+ +LDE S ++ PD +++++ K GG +A +
Sbjct: 475 APDVYAYNALMSGLARTGMLDEALSTMRRMQEHGCIPDINSYNIILNGLAKTGGPHRAME 534
Query: 226 LFALMAERGVQQSTVTYNSLM---SFETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYG 282
+ + M + V+ V+YN+++ S ++E SK+ +M G + D+++Y+ ++ A G
Sbjct: 535 MLSNMKQSTVRPDVVSYNTVLGALSHAGMFEEASKLMKEMNTLGFEYDLITYSSILEAIG 594
Query: 283 KARRE 287
K E
Sbjct: 595 KVDHE 599
>gi|255559961|ref|XP_002520999.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223539836|gb|EEF41416.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 628
Score = 145 bits (365), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 102/369 (27%), Positives = 182/369 (49%), Gaps = 20/369 (5%)
Query: 118 VLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFV 177
V + +KGY P+ + T L++ G+ A +F+ M RPSA+T +++
Sbjct: 164 VFGMILRKGYRPNTRTFTNLVKGLCLEGKIGEAVRVFKIMGVFDCRPSAITCGVLISGLC 223
Query: 178 EANKFKEAEEVFMTLLDEEKS---PLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERG 234
A ++ +++ KP + +I K G E+A++ F M E+G
Sbjct: 224 RTGNTCNALKLHEAMINGNSDFGINCKPTVVSYSCIIDSLCKDGLVERAKEFFVEMKEKG 283
Query: 235 VQQSTVTYNSLM---SFETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEAL 291
+ + VTY SL+ + ++E +++ +M GL PDVV++++LI A K + +EA
Sbjct: 284 IFPNVVTYTSLLHGLCSASEWEEAKRLFIEMVDHGLLPDVVTFSVLIGALCKVGKVKEAS 343
Query: 292 AVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAY 351
+F+ M+ V P+ + YNIL++ + ++GMVD+ + +F M RC D SY+ ++ AY
Sbjct: 344 GLFDLMVQRYVEPSTRTYNILIEGYCLAGMVDEGKKIFLSMVNKRCQHDAGSYSILMKAY 403
Query: 352 VNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMM-EI-YDKMRVNGIKP 409
S++ GA +R + G P VIT Y+KV + K+ EI + M ++ I
Sbjct: 404 CKDSEVHGAMILYREMMDRGIQPTVIT-------YSKVGDARKLFGEIQFQDMVLDSI-- 454
Query: 410 NQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELL 469
+ +I+ +D KN A+ + +E+C F + N L++ +++ A EL
Sbjct: 455 SYSIYNVYLDGLCKNGCVSEALDVFYGLENCKFASNVAIFNSLINGMCRSEKLEIAWEL- 513
Query: 470 GNFNHPNNE 478
FN NE
Sbjct: 514 --FNRLCNE 520
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 97/375 (25%), Positives = 172/375 (45%), Gaps = 34/375 (9%)
Query: 129 PSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEV 188
P+VVS++ ++++ + G + A+ F M+ G P+ +TY +L A++++EA+ +
Sbjct: 251 PTVVSYSCIIDSLCKDGLVERAKEFFVEMKEKGIFPNVVTYTSLLHGLCSASEWEEAKRL 310
Query: 189 FMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLM-- 246
F+ ++D L PD F ++I K G ++A LF LM +R V+ ST TYN L+
Sbjct: 311 FIEMVDHG---LLPDVVTFSVLIGALCKVGKVKEASGLFDLMVQRYVEPSTRTYNILIEG 367
Query: 247 -SFETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPT 305
E KI+ M Q D SY++L+ AY K A+ ++ EM+D G++PT
Sbjct: 368 YCLAGMVDEGKKIFLSMVNKRCQHDAGSYSILMKAYCKDSEVHGAMILYREMMDRGIQPT 427
Query: 306 ----------------------------HKAYNILLDAFAISGMVDQARTVFKCMRRDRC 337
+ YN+ LD +G V +A VF + +
Sbjct: 428 VITYSKVGDARKLFGEIQFQDMVLDSISYSIYNVYLDGLCKNGCVSEALDVFYGLENCKF 487
Query: 338 SPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMME 397
+ ++ + ++++ + +E A + F RL + P+V+TY +I G KV +K +
Sbjct: 488 ASNVAIFNSLINGMCRSEKLEIAWELFNRLCNEALQPDVVTYTIMIYGLCKVGQPQKAYD 547
Query: 398 IYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAK 457
++ +M G PN F T+M N + V +M + PD I++ +
Sbjct: 548 LFLEMEEKGCAPNVVTFNTLMRGLCLNSERPKIVELLHKMAARKLSPDASTLLIVMDILL 607
Query: 458 TADERNEANELLGNF 472
+ +E LL F
Sbjct: 608 KDENYHECLNLLPTF 622
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 73/340 (21%), Positives = 158/340 (46%), Gaps = 13/340 (3%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + + L+ ++ +A+++ M G P VV+ + L+ A + G+ K A +F
Sbjct: 287 NVVTYTSLLHGLCSASEWEEAKRLFIEMVDHGLLPDVVTFSVLIGALCKVGKVKEASGLF 346
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
M PS TY I+++ + A E +++F++++++ + D + +++ Y
Sbjct: 347 DLMVQRYVEPSTRTYNILIEGYCLAGMVDEGKKIFLSMVNKR---CQHDAGSYSILMKAY 403
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSKIYDQMQRAGLQPDVVSY 274
K A L+ M +RG+Q + +TY+ + + K++ ++Q + D +SY
Sbjct: 404 CKDSEVHGAMILYREMMDRGIQPTVITYSKV-------GDARKLFGEIQFQDMVLDSISY 456
Query: 275 AL---LINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKC 331
++ ++ K EAL VF + + +N L++ S ++ A +F
Sbjct: 457 SIYNVYLDGLCKNGCVSEALDVFYGLENCKFASNVAIFNSLINGMCRSEKLEIAWELFNR 516
Query: 332 MRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNN 391
+ + PD+ +YT M+ + A F +++ G PNV+T+ TL++G +
Sbjct: 517 LCNEALQPDVVTYTIMIYGLCKVGQPQKAYDLFLEMEEKGCAPNVVTFNTLMRGLCLNSE 576
Query: 392 LEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAV 431
K++E+ KM + P+ + +MD K++++ +
Sbjct: 577 RPKIVELLHKMAARKLSPDASTLLIVMDILLKDENYHECL 616
Score = 78.6 bits (192), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 63/261 (24%), Positives = 104/261 (39%), Gaps = 58/261 (22%)
Query: 252 YKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNI 311
Y V + +M GL + +S +L+N +R E VF +L G RP + +
Sbjct: 123 YLHVISMCGRMNSIGLLKNFISLNILLNCLCSVKRVFEGFVVFGMILRKGYRPNTRTFTN 182
Query: 312 LLDAFAISGMVDQARTVFKCM--------------------------------------R 333
L+ + G + +A VFK M
Sbjct: 183 LVKGLCLEGKIGEAVRVFKIMGVFDCRPSAITCGVLISGLCRTGNTCNALKLHEAMINGN 242
Query: 334 RD---RCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVN 390
D C P + SY+ ++ + +E A++FF +K+ G PNV+TY +L+ G +
Sbjct: 243 SDFGINCKPTVVSYSCIIDSLCKDGLVERAKEFFVEMKEKGIFPNVVTYTSLLHGLCSAS 302
Query: 391 NLEKMMEIYDKMRVNGIKPNQTIFTTIMDAY---GKNKD----FDSAVVWYKEMESCGFP 443
E+ ++ +M +G+ P+ F+ ++ A GK K+ FD V Y E
Sbjct: 303 EWEEAKRLFIEMVDHGLLPDVVTFSVLIGALCKVGKVKEASGLFDLMVQRYVE------- 355
Query: 444 PDQKAKNILL---SLAKTADE 461
P + NIL+ LA DE
Sbjct: 356 PSTRTYNILIEGYCLAGMVDE 376
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/283 (19%), Positives = 128/283 (45%), Gaps = 17/283 (6%)
Query: 61 DLVLGTLVRLKQLKKWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLS 120
+++G L ++ ++K+ + + + L +Q + + + + +LI Y G ++ +K+
Sbjct: 327 SVLIGALCKVGKVKEASGLFD----LMVQRYVEPSTRTYNILIEGYCLAGMVDEGKKIFL 382
Query: 121 FMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEAN 180
M K S++ LM+AY + A ++R M G +P+ +TY +
Sbjct: 383 SMVNKRCQHDAGSYSILMKAYCKDSEVHGAMILYREMMDRGIQPTVITY----------S 432
Query: 181 KFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTV 240
K +A ++F + ++ ++++ + K G +A +F + +
Sbjct: 433 KVGDARKLFGEIQFQDMVLDSISYSIYNVYLDGLCKNGCVSEALDVFYGLENCKFASNVA 492
Query: 241 TYNSLMSFETNYKEVS---KIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEM 297
+NSL++ +++ ++++++ LQPDVV+Y ++I K + ++A +F EM
Sbjct: 493 IFNSLINGMCRSEKLEIAWELFNRLCNEALQPDVVTYTIMIYGLCKVGQPQKAYDLFLEM 552
Query: 298 LDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPD 340
+ G P +N L+ ++ + + M + SPD
Sbjct: 553 EEKGCAPNVVTFNTLMRGLCLNSERPKIVELLHKMAARKLSPD 595
>gi|297848576|ref|XP_002892169.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297338011|gb|EFH68428.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 662
Score = 145 bits (365), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 87/357 (24%), Positives = 175/357 (49%), Gaps = 6/357 (1%)
Query: 85 WLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRG 144
W R Q + N ++ L+ D ++ + S + K + +V +L++++G+
Sbjct: 141 WSRKQKKYTHNLECYVSLVDVLALAKDVDRIRFICSEIRKFEFPMTVSPGNSLIKSFGKL 200
Query: 145 GRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQ 204
G + ++R+M+ +G P+ TY ++ V A AE VF + E +KPD
Sbjct: 201 GMVEELLWVWRKMKENGIEPTLYTYNFLMNGLVSAMFVDSAERVFEVM---ESGRIKPDV 257
Query: 205 KMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMS---FETNYKEVSKIYDQ 261
++ MI Y KAG +KA + +M +G++ +TY +++ ++++ +Y +
Sbjct: 258 VTYNTMIKGYCKAGQTQKALEKLRVMETKGLEADKITYMTMIQACYADSDFSSCVALYQE 317
Query: 262 MQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGM 321
M GLQ +++L+I K + E AVFE M+ G +P Y +L+D +A +G
Sbjct: 318 MDEKGLQVPPHAFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAKTGS 377
Query: 322 VDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGT 381
V+ A + M + +PD+ +Y+ +++ +E A +F+ + +G N + Y +
Sbjct: 378 VEDAIRLLHRMIDEGFNPDVVTYSVVVNGLCKNGRVEEAMDYFQTCRFNGLAINSMFYSS 437
Query: 382 LIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEME 438
LI G K +++ ++++M G + + ++DA+ K+ D A+ +K ME
Sbjct: 438 LIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYNALIDAFTKHGKVDEALALFKRME 494
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 64/235 (27%), Positives = 113/235 (48%), Gaps = 7/235 (2%)
Query: 99 FLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQ 158
F ++I K+G N+ V M +KG P+V +T L++ Y + G ++A + RM
Sbjct: 330 FSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAKTGSVEDAIRLLHRMI 389
Query: 159 SSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAG 218
G P +TY +++ + + +EA + F T + L + + +I KAG
Sbjct: 390 DEGFNPDVVTYSVVVNGLCKNGRVEEAMDYFQTC---RFNGLAINSMFYSSLIDGLGKAG 446
Query: 219 GYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSKIYDQMQRA----GLQPDVVSY 274
++A +LF M+E+G + + YN+L+ T + +V + +R G V +Y
Sbjct: 447 RVDEAERLFEEMSEKGCTRDSYCYNALIDAFTKHGKVDEALALFKRMEEEEGCDQTVYTY 506
Query: 275 ALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVF 329
+LI+ K R EEAL +++ M+D G+ PT L +SG V +A +
Sbjct: 507 TILISGMFKEHRNEEALKLWDMMIDKGITPTAACLRALSTGLCLSGKVARACKIL 561
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 90/213 (42%), Gaps = 35/213 (16%)
Query: 277 LINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDR 336
LI ++GK EE L V+ +M + G+ PT YN L++ + VD A VF+ M R
Sbjct: 193 LIKSFGKLGMVEELLWVWRKMKENGIEPTLYTYNFLMNGLVSAMFVDSAERVFEVMESGR 252
Query: 337 CSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIK------------ 384
PD+ +Y TM+ Y A + A + R ++ G + ITY T+I+
Sbjct: 253 IKPDVVTYNTMIKGYCKAGQTQKALEKLRVMETKGLEADKITYMTMIQACYADSDFSSCV 312
Query: 385 -----------------------GYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAY 421
G K L + +++ M G KPN I+T ++D Y
Sbjct: 313 ALYQEMDEKGLQVPPHAFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGY 372
Query: 422 GKNKDFDSAVVWYKEMESCGFPPDQKAKNILLS 454
K + A+ M GF PD +++++
Sbjct: 373 AKTGSVEDAIRLLHRMIDEGFNPDVVTYSVVVN 405
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 91/180 (50%)
Query: 310 NILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQ 369
N L+ +F GMV++ V++ M+ + P + +Y +++ V+A ++ AE+ F ++
Sbjct: 191 NSLIKSFGKLGMVEELLWVWRKMKENGIEPTLYTYNFLMNGLVSAMFVDSAERVFEVMES 250
Query: 370 DGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDS 429
P+V+TY T+IKGY K +K +E M G++ ++ + T++ A + DF S
Sbjct: 251 GRIKPDVVTYNTMIKGYCKAGQTQKALEKLRVMETKGLEADKITYMTMIQACYADSDFSS 310
Query: 430 AVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGINGLSISVD 489
V Y+EM+ G A ++++ + NE + N ++P + ++ +D
Sbjct: 311 CVALYQEMDEKGLQVPPHAFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLID 370
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 46/211 (21%), Positives = 96/211 (45%), Gaps = 6/211 (2%)
Query: 94 FNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAI 153
N M + LI GK G ++AE++ M++KG + AL++A+ + G+ A A+
Sbjct: 430 INSMFYSSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYNALIDAFTKHGKVDEALAL 489
Query: 154 FRRM-QSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIY 212
F+RM + G + TY I++ + ++ +EA +++ ++D+ +P + +
Sbjct: 490 FKRMEEEEGCDQTVYTYTILISGMFKEHRNEEALKLWDMMIDKGITPTAACLRALSTGLC 549
Query: 213 MYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSF--ETNYKEVSKIYDQMQRAGLQPD 270
+ +G +A K+ +A GV + + + KE K+ D + G +
Sbjct: 550 L---SGKVARACKILDELAPMGVILDAACEDMINTLCKAGRIKEACKLADGITERGREVP 606
Query: 271 VVSYALLINAYGKARREEEALAVFEEMLDAG 301
++INA K + + A+ + + G
Sbjct: 607 GRIRTVMINALRKVGKADLAMKLMHSKIGIG 637
>gi|297849270|ref|XP_002892516.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297338358|gb|EFH68775.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 607
Score = 145 bits (365), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 100/394 (25%), Positives = 183/394 (46%), Gaps = 16/394 (4%)
Query: 76 WNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHT 135
W E+L+ + + N F +L+ + K+G+ A+KV + K+ P+VVS
Sbjct: 225 WGFYMEILD-----AGFPLNVYVFNILMNKFCKEGNICDAQKVFDEITKRSLRPTVVSFN 279
Query: 136 ALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDE 195
L+ Y + G + M+ S RP TY ++ + NK A +F + +
Sbjct: 280 TLINGYCKVGNLDVGFRLKHHMEKSRTRPDVFTYSALINALCKENKMDGAHRLFYEMCER 339
Query: 196 EKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMS-FETNYKE 254
L P+ +F +I+ + + G + ++ + M +G+Q V YN+L++ F N
Sbjct: 340 G---LIPNDVIFTTLIHGHSRNGQIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDL 396
Query: 255 VS--KIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNIL 312
V+ I D M R GL+PD V+Y LI+ + + + AL + +EM G+ ++ L
Sbjct: 397 VAARNIVDGMIRRGLRPDKVTYTTLIDGFCRGGDVDTALEIRKEMDQNGIELDRVGFSAL 456
Query: 313 LDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGF 372
+ G V A + M R PD +YT M+ A+ D + K + ++ DG
Sbjct: 457 ICGMCKEGRVIDAERALREMLRAGMKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGH 516
Query: 373 VPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVV 432
+PNV+TY L+ G K+ ++ + D M G+ P+ + T+++ + ++ + A
Sbjct: 517 IPNVVTYNVLLNGLCKLGQMKNADMLLDAMLNVGVVPDDITYNTLLEGHHRHAN---ASK 573
Query: 433 WYKEMESCGFPPDQKA-KNILLSLAKTA-DERNE 464
YK+ G D + K+++ L + + D RN
Sbjct: 574 HYKQKPEIGIVADLASYKSLVNELYRASKDHRNR 607
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/287 (22%), Positives = 132/287 (45%), Gaps = 5/287 (1%)
Query: 170 QIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFAL 229
Q +++L V A VF++L++ +P+ + ++ Y G + F L
Sbjct: 138 QSLIELVVSRKGKNSASSVFISLVEMRGTPMC--DFLVDALMITYMDLGFIPDVIQCFRL 195
Query: 230 MAERGVQQSTVTYNSLMSFETNYKEVSKI---YDQMQRAGLQPDVVSYALLINAYGKARR 286
+ +L+ + Y ++ AG +V + +L+N + K
Sbjct: 196 SRKHNFVVPIRGCGNLLDRMMKLNPTGTVWGFYMEILDAGFPLNVYVFNILMNKFCKEGN 255
Query: 287 EEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTT 346
+A VF+E+ +RPT ++N L++ + G +D + M + R PD+ +Y+
Sbjct: 256 ICDAQKVFDEITKRSLRPTVVSFNTLINGYCKVGNLDVGFRLKHHMEKSRTRPDVFTYSA 315
Query: 347 MLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNG 406
+++A + M+GA + F + + G +PN + + TLI G+++ ++ M E Y KM G
Sbjct: 316 LINALCKENKMDGAHRLFYEMCERGLIPNDVIFTTLIHGHSRNGQIDLMKESYQKMLSKG 375
Query: 407 IKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILL 453
++P+ ++ T+++ + KN D +A M G PD+ L+
Sbjct: 376 LQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKVTYTTLI 422
Score = 40.0 bits (92), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 43/239 (17%), Positives = 90/239 (37%), Gaps = 8/239 (3%)
Query: 236 QQSTVTYNSLMSFETNYKEVSKIYDQMQR-AGLQPDVVSYALLINAYGKARREEEALAVF 294
+S + +S + ++ + Y M R + V LI + + A +VF
Sbjct: 98 HRSIFAFFKFISSQPEFRFTVETYFVMARFLAIHEMFVEAQSLIELVVSRKGKNSASSVF 157
Query: 295 EEMLDAGVRPTHKAYNILLDAFAIS----GMVDQARTVFKCMRRDRCSPDICSYTTMLSA 350
+++ P + L+DA I+ G + F+ R+ I +L
Sbjct: 158 ISLVEMRGTPM---CDFLVDALMITYMDLGFIPDVIQCFRLSRKHNFVVPIRGCGNLLDR 214
Query: 351 YVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPN 410
+ + F+ + GF NV + L+ + K N+ +++D++ ++P
Sbjct: 215 MMKLNPTGTVWGFYMEILDAGFPLNVYVFNILMNKFCKEGNICDAQKVFDEITKRSLRPT 274
Query: 411 QTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELL 469
F T+++ Y K + D ME PD + L++ ++ + A+ L
Sbjct: 275 VVSFNTLINGYCKVGNLDVGFRLKHHMEKSRTRPDVFTYSALINALCKENKMDGAHRLF 333
>gi|255661214|gb|ACU25776.1| pentatricopeptide repeat-containing protein [Duranta serratifolia]
Length = 426
Score = 145 bits (365), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 95/378 (25%), Positives = 183/378 (48%), Gaps = 39/378 (10%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
LI K D++KA + S + + G P +V++ +++ +G+ ++ A ++ M+ +G
Sbjct: 50 LIELSRKLCDYSKAISIFSKLKRSGITPDLVAYNSMINVFGKARLFREARSLISEMRVAG 109
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
P+ ++Y +L ++VE +F+EA VF + E K L D ++MI +Y + +
Sbjct: 110 VMPNTVSYSTLLTMYVENKRFREALSVFAEM-REIKCLL--DLTTCNIMIDVYGQLDMAK 166
Query: 222 KARKLFALMAERGVQQSTVTYNSLMSFETN---YKEVSKIYDQMQRAGLQPDVVSYALLI 278
+A KLF M + G++ + V+YN+L+ + + E ++ MQR + +VV+Y ++
Sbjct: 167 EADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKDIVQNVVTYNTMM 226
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCS 338
YGK E+A + +EM + G+ P Y+ ++ + G +D+A +F+ +R
Sbjct: 227 MIYGKTLEHEKANNLIQEMQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRVSGIE 286
Query: 339 PDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVP------------------------ 374
D Y TM+ AY A + A++ LK+ +P
Sbjct: 287 IDQVLYQTMIVAYERAGLVAHAKRLLHELKRPNNIPRDTAIHILAGAGRIEEATWVFRQA 346
Query: 375 -------NVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDF 427
++ + +I ++K ++E+++KMR G P+ + +++AYGK F
Sbjct: 347 IDAGEVKDITVFERMISLFSKYKKYTNVVEVFEKMRGLGYFPDSNVIAVVLNAYGKLHKF 406
Query: 428 DSAVVWYKEM--ESCGFP 443
++A Y EM E C FP
Sbjct: 407 ENANGVYMEMQDEGCVFP 424
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 85/318 (26%), Positives = 142/318 (44%), Gaps = 38/318 (11%)
Query: 200 LKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFE---TNYKEVS 256
L PD+ + +I + K G ++ A M + V V Y++L+ +Y +
Sbjct: 5 LSPDRYTYSTLITHFGKEGLFDGALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDYSKAI 64
Query: 257 KIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAF 316
I+ +++R+G+ PD+V+Y +IN +GKAR EA ++ EM AGV P +Y+ LL +
Sbjct: 65 SIFSKLKRSGITPDLVAYNSMINVFGKARLFREARSLISEMRVAGVMPNTVSYSTLLTMY 124
Query: 317 AISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNV 376
+ +A +VF MR +C D+ + M+ Y + A+K F +++ G PNV
Sbjct: 125 VENKRFREALSVFAEMREIKCLLDLTTCNIMIDVYGQLDMAKEADKLFWGMRKMGIEPNV 184
Query: 377 ITYGTLIKGYA----------------------KVNNLEKMMEIYDK------------- 401
++Y TL++ Y V MM IY K
Sbjct: 185 VSYNTLLRVYGDAELFGEAIHLFRLMQRKDIVQNVVTYNTMMMIYGKTLEHEKANNLIQE 244
Query: 402 MRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADE 461
M+ GI+PN ++TI+ +GK D A + ++++ G DQ ++ + A
Sbjct: 245 MQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRVSGIEIDQVLYQTMIVAYERAGL 304
Query: 462 RNEANELLGNFNHPNNEP 479
A LL PNN P
Sbjct: 305 VAHAKRLLHELKRPNNIP 322
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 82/183 (44%)
Query: 299 DAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDME 358
D + P Y+ L+ F G+ D A + + M +DR D+ Y+ ++ D
Sbjct: 2 DRALSPDRYTYSTLITHFGKEGLFDGALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDYS 61
Query: 359 GAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIM 418
A F +LK+ G P+++ Y ++I + K + + +MRV G+ PN ++T++
Sbjct: 62 KAISIFSKLKRSGITPDLVAYNSMINVFGKARLFREARSLISEMRVAGVMPNTVSYSTLL 121
Query: 419 DAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNE 478
Y +NK F A+ + EM D NI++ + D EA++L E
Sbjct: 122 TMYVENKRFREALSVFAEMREIKCLLDLTTCNIMIDVYGQLDMAKEADKLFWGMRKMGIE 181
Query: 479 PGI 481
P +
Sbjct: 182 PNV 184
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 58/248 (23%), Positives = 117/248 (47%), Gaps = 7/248 (2%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + + L+ YG F +A + M +K +VV++ +M YG+ ++ A +
Sbjct: 183 NVVSYNTLLRVYGDAELFGEAIHLFRLMQRKDIVQNVVTYNTMMMIYGKTLEHEKANNLI 242
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
+ MQ+ G P+++TY I+ ++ + K A +F L S ++ DQ ++ MI Y
Sbjct: 243 QEMQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKL---RVSGIEIDQVLYQTMIVAY 299
Query: 215 KKAGGYEKARKLFA-LMAERGVQQSTVTYNSLMSFETNYKEVSKIYDQMQRAGLQPDVVS 273
++AG A++L L + + T + +++ +E + ++ Q AG D+
Sbjct: 300 ERAGLVAHAKRLLHELKRPNNIPRDTAIH--ILAGAGRIEEATWVFRQAIDAGEVKDITV 357
Query: 274 YALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMR 333
+ +I+ + K ++ + VFE+M G P ++L+A+ + A V+ M+
Sbjct: 358 FERMISLFSKYKKYTNVVEVFEKMRGLGYFPDSNVIAVVLNAYGKLHKFENANGVYMEMQ 417
Query: 334 RDRCS-PD 340
+ C PD
Sbjct: 418 DEGCVFPD 425
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 67/309 (21%), Positives = 129/309 (41%), Gaps = 45/309 (14%)
Query: 101 MLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSS 160
++I YG+ +A+K+ M K G P+VVS+ L+ YG + A +FR MQ
Sbjct: 154 IMIDVYGQLDMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRK 213
Query: 161 GPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGY 220
+ +TY + M+ +Y K +
Sbjct: 214 DIVQNVVTY--------------------------------------NTMMMIYGKTLEH 235
Query: 221 EKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSK---IYDQMQRAGLQPDVVSYALL 277
EKA L M RG++ +++TY++++S ++ + ++ +++ +G++ D V Y +
Sbjct: 236 EKANNLIQEMQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRVSGIEIDQVLYQTM 295
Query: 278 INAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRC 337
I AY +A A + E+ P A +IL A G +++A VF+
Sbjct: 296 IVAYERAGLVAHAKRLLHELKRPNNIPRDTAIHILAGA----GRIEEATWVFRQAIDAGE 351
Query: 338 SPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMME 397
DI + M+S + + F +++ G+ P+ ++ Y K++ E
Sbjct: 352 VKDITVFERMISLFSKYKKYTNVVEVFEKMRGLGYFPDSNVIAVVLNAYGKLHKFENANG 411
Query: 398 IYDKMRVNG 406
+Y +M+ G
Sbjct: 412 VYMEMQDEG 420
>gi|242067341|ref|XP_002448947.1| hypothetical protein SORBIDRAFT_05g002250 [Sorghum bicolor]
gi|241934790|gb|EES07935.1| hypothetical protein SORBIDRAFT_05g002250 [Sorghum bicolor]
Length = 797
Score = 145 bits (365), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 94/351 (26%), Positives = 170/351 (48%), Gaps = 14/351 (3%)
Query: 107 GKQGDFNKAEKVLSFMNKK------GYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSS 160
G++ ++E V+S N+ P + +++ L+ + R GR ++ A F + S
Sbjct: 64 GRRSSTTESELVVSLFNRMIRECTIKVTPDLCTYSILIGCFCRMGRLEHGFATFGLILKS 123
Query: 161 GPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGY 220
G R + + +LK +A + +EA ++ + + E PD ++ ++ +
Sbjct: 124 GWRVNNIVINQLLKGLCDAKRLREAMDILIKRMPELGC--TPDVVSYNTLLKGFCNEKRA 181
Query: 221 EKARKLFALMAE---RGVQQSTVTYNSLMSFETNYKEVSKIYD---QMQRAGLQPDVVSY 274
E+A +L +MA+ R + V+Y ++++ +V K Y+ +M G+QP+VV+Y
Sbjct: 182 EEALELLHMMADSQGRSCPPNVVSYATVINGFFTEGQVDKAYNLFLEMMDRGIQPNVVTY 241
Query: 275 ALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRR 334
+I+ KA+ + A VF++M+D GV+P + YN L+ + G + + + M
Sbjct: 242 TTVIDGLCKAQVVDRAEGVFQQMIDKGVKPDNDTYNCLIHGYLSIGKWKEVVRMLEEMSA 301
Query: 335 DRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEK 394
PD +Y ++L+ N A FF + + G PNV YG LI GYA L +
Sbjct: 302 HGLKPDCYTYGSLLNYLCNNGRCREARFFFDSMIRKGIKPNVAIYGILIHGYATKGALSE 361
Query: 395 MMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPD 445
M ++ + M NG+ P+ IF I AY K D A+ + +M+ G PD
Sbjct: 362 MHDLLNLMVENGLSPDHHIFNIIFTAYAKKAMIDEAMHIFNKMKQQGLSPD 412
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 93/380 (24%), Positives = 174/380 (45%), Gaps = 6/380 (1%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + + +I K ++AE V M KG P ++ L+ Y G++K +
Sbjct: 237 NVVTYTTVIDGLCKAQVVDRAEGVFQQMIDKGVKPDNDTYNCLIHGYLSIGKWKEVVRML 296
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
M + G +P TY +L + +EA F +++ + +KP+ ++ ++I+ Y
Sbjct: 297 EEMSAHGLKPDCYTYGSLLNYLCNNGRCREARFFFDSMI---RKGIKPNVAIYGILIHGY 353
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSLMSF---ETNYKEVSKIYDQMQRAGLQPDV 271
G + L LM E G+ +N + + + E I+++M++ GL PDV
Sbjct: 354 ATKGALSEMHDLLNLMVENGLSPDHHIFNIIFTAYAKKAMIDEAMHIFNKMKQQGLSPDV 413
Query: 272 VSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKC 331
V++ LI+A K R ++A+ F +M++ GV P +N L+ ++A+ +
Sbjct: 414 VNFGALIDALCKLGRVDDAVLKFNQMMNEGVAPNIFVFNSLVYGLCTVDKWEKAKEFYFE 473
Query: 332 MRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNN 391
M PD+ + T+L + A++ +++ G P+VI+Y TLI G+ V
Sbjct: 474 MLNQGIRPDVVFFNTILCNLCTKGQVMKAQRLIDLMERVGTRPDVISYTTLIGGHCLVGR 533
Query: 392 LEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNI 451
+++ + D M G+KP++ + T++ Y + D A ++EM G P +
Sbjct: 534 IDEAAKSLDVMLSVGLKPDEWTYNTLLHGYCRAGRIDDAYGVFREMLRNGITPGVVTYST 593
Query: 452 LLSLAKTADERNEANELLGN 471
+L T +EA EL N
Sbjct: 594 ILHGLFTTRRFSEAKELYLN 613
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 95/391 (24%), Positives = 181/391 (46%), Gaps = 10/391 (2%)
Query: 86 LRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVL-SFMNKKGYAPSVVSHTALMEAYGRG 144
L ++S W N + L+ +A +L M + G P VVS+ L++ +
Sbjct: 119 LILKSGWRVNNIVINQLLKGLCDAKRLREAMDILIKRMPELGCTPDVVSYNTLLKGFCNE 178
Query: 145 GRYKNAEAIFRRMQSSGPR---PSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLK 201
R + A + M S R P+ ++Y ++ F + +A +F+ ++D ++
Sbjct: 179 KRAEEALELLHMMADSQGRSCPPNVVSYATVINGFFTEGQVDKAYNLFLEMMDR---GIQ 235
Query: 202 PDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETN---YKEVSKI 258
P+ + +I KA ++A +F M ++GV+ TYN L+ + +KEV ++
Sbjct: 236 PNVVTYTTVIDGLCKAQVVDRAEGVFQQMIDKGVKPDNDTYNCLIHGYLSIGKWKEVVRM 295
Query: 259 YDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAI 318
++M GL+PD +Y L+N R EA F+ M+ G++P Y IL+ +A
Sbjct: 296 LEEMSAHGLKPDCYTYGSLLNYLCNNGRCREARFFFDSMIRKGIKPNVAIYGILIHGYAT 355
Query: 319 SGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVIT 378
G + + + M + SPD + + +AY + ++ A F ++KQ G P+V+
Sbjct: 356 KGALSEMHDLLNLMVENGLSPDHHIFNIIFTAYAKKAMIDEAMHIFNKMKQQGLSPDVVN 415
Query: 379 YGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEME 438
+G LI K+ ++ + +++M G+ PN +F +++ ++ A +Y EM
Sbjct: 416 FGALIDALCKLGRVDDAVLKFNQMMNEGVAPNIFVFNSLVYGLCTVDKWEKAKEFYFEML 475
Query: 439 SCGFPPDQKAKNILLSLAKTADERNEANELL 469
+ G PD N +L T + +A L+
Sbjct: 476 NQGIRPDVVFFNTILCNLCTKGQVMKAQRLI 506
Score = 132 bits (331), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 80/348 (22%), Positives = 162/348 (46%), Gaps = 6/348 (1%)
Query: 101 MLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSS 160
+LI Y +G ++ +L+ M + G +P + AY + A IF +M+
Sbjct: 348 ILIHGYATKGALSEMHDLLNLMVENGLSPDHHIFNIIFTAYAKKAMIDEAMHIFNKMKQQ 407
Query: 161 GPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGY 220
G P + + ++ + + +A F +++E + P+ +F+ ++Y +
Sbjct: 408 GLSPDVVNFGALIDALCKLGRVDDAVLKFNQMMNE---GVAPNIFVFNSLVYGLCTVDKW 464
Query: 221 EKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSK---IYDQMQRAGLQPDVVSYALL 277
EKA++ + M +G++ V +N+++ +V K + D M+R G +PDV+SY L
Sbjct: 465 EKAKEFYFEMLNQGIRPDVVFFNTILCNLCTKGQVMKAQRLIDLMERVGTRPDVISYTTL 524
Query: 278 INAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRC 337
I + R +EA + ML G++P YN LL + +G +D A VF+ M R+
Sbjct: 525 IGGHCLVGRIDEAAKSLDVMLSVGLKPDEWTYNTLLHGYCRAGRIDDAYGVFREMLRNGI 584
Query: 338 SPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMME 397
+P + +Y+T+L A++ + + G N+ Y ++ G +K N +++ +
Sbjct: 585 TPGVVTYSTILHGLFTTRRFSEAKELYLNMITSGKQWNIWIYNIILNGLSKNNCVDEAFK 644
Query: 398 IYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPD 445
++ + + T F ++ A K+ + A+ + + S G PD
Sbjct: 645 LFQSLCSKDFQLEITTFNIMIGALFKSGRNEDAMHLFATISSYGLVPD 692
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 86/408 (21%), Positives = 178/408 (43%), Gaps = 41/408 (10%)
Query: 99 FLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQ 158
F ++ TAY K+ ++A + + M ++G +P VV+ AL++A + GR +A F +M
Sbjct: 381 FNIIFTAYAKKAMIDEAMHIFNKMKQQGLSPDVVNFGALIDALCKLGRVDDAVLKFNQMM 440
Query: 159 SSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAG 218
+ G P+ + ++ +K+++A+E + +L++ ++PD F+ ++ G
Sbjct: 441 NEGVAPNIFVFNSLVYGLCTVDKWEKAKEFYFEMLNQ---GIRPDVVFFNTILCNLCTKG 497
Query: 219 GYEKARKLFALMAERGVQQSTVTYNSLM-------------------------------- 246
KA++L LM G + ++Y +L+
Sbjct: 498 QVMKAQRLIDLMERVGTRPDVISYTTLIGGHCLVGRIDEAAKSLDVMLSVGLKPDEWTYN 557
Query: 247 SFETNYKEVSKI------YDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDA 300
+ Y +I + +M R G+ P VV+Y+ +++ RR EA ++ M+ +
Sbjct: 558 TLLHGYCRAGRIDDAYGVFREMLRNGITPGVVTYSTILHGLFTTRRFSEAKELYLNMITS 617
Query: 301 GVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGA 360
G + YNI+L+ + + VD+A +F+ + +I ++ M+ A + E A
Sbjct: 618 GKQWNIWIYNIILNGLSKNNCVDEAFKLFQSLCSKDFQLEITTFNIMIGALFKSGRNEDA 677
Query: 361 EKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDA 420
F + G VP+V TY + + + LE+ +++ M +G PN + ++
Sbjct: 678 MHLFATISSYGLVPDVFTYCLIAENLIEEGYLEEFDDLFSAMEKSGTTPNSRMLNALVRR 737
Query: 421 YGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANEL 468
D A + +++ F + +L+SL + + A L
Sbjct: 738 LLHRGDITRAGAYLSKLDEKNFSLEASTTAMLISLLSRDEYHHHATSL 785
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 84/182 (46%), Gaps = 11/182 (6%)
Query: 92 WDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAE 151
W +N L+ Y + G + A V M + G P VV+++ ++ R+ A+
Sbjct: 554 WTYNT-----LLHGYCRAGRIDDAYGVFREMLRNGITPGVVTYSTILHGLFTTRRFSEAK 608
Query: 152 AIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMI 211
++ M +SG + + Y IIL + N EA ++F +L ++ + + F++MI
Sbjct: 609 ELYLNMITSGKQWNIWIYNIILNGLSKNNCVDEAFKLFQSLCSKD---FQLEITTFNIMI 665
Query: 212 YMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMS--FETNY-KEVSKIYDQMQRAGLQ 268
K+G E A LFA ++ G+ TY + E Y +E ++ M+++G
Sbjct: 666 GALFKSGRNEDAMHLFATISSYGLVPDVFTYCLIAENLIEEGYLEEFDDLFSAMEKSGTT 725
Query: 269 PD 270
P+
Sbjct: 726 PN 727
Score = 44.7 bits (104), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 34/175 (19%), Positives = 72/175 (41%), Gaps = 21/175 (12%)
Query: 74 KKWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVS 133
K+WN+ W +N +++ K ++A K+ + K + + +
Sbjct: 619 KQWNI-------------WIYN-----IILNGLSKNNCVDEAFKLFQSLCSKDFQLEITT 660
Query: 134 HTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLL 193
++ A + GR ++A +F + S G P TY +I + +E +E +++F +
Sbjct: 661 FNIMIGALFKSGRNEDAMHLFATISSYGLVPDVFTYCLIAENLIEEGYLEEFDDLFSAM- 719
Query: 194 DEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSF 248
EKS P+ +M + ++ G +A + + E+ T L+S
Sbjct: 720 --EKSGTTPNSRMLNALVRRLLHRGDITRAGAYLSKLDEKNFSLEASTTAMLISL 772
>gi|125559559|gb|EAZ05095.1| hypothetical protein OsI_27286 [Oryza sativa Indica Group]
Length = 551
Score = 145 bits (365), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 92/373 (24%), Positives = 175/373 (46%), Gaps = 8/373 (2%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + + L+ AY ++ D ++ ++L M +G P+V ++T L++ EA+F
Sbjct: 177 NALCYNSLLDAYTREKDDDRVAEMLKVMENEGIEPTVGTYTILVDGLSAARDITKVEAVF 236
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDE-EKSPLKPDQKMFHMMIYM 213
M+S Y ++ + A + A EVF DE + ++P++ + +I
Sbjct: 237 EEMKSKNLSGDVYFYSSVINAYCRAGNVRRASEVF----DECVGNGIEPNEHTYGALING 292
Query: 214 YKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSK---IYDQMQRAGLQPD 270
+ K G E A L M RGV + + +N+++ V K I M++ G++ D
Sbjct: 293 FCKIGQMEAAEMLVTDMQVRGVGINQIVFNTMIDGYCRKNMVDKALEIKMIMEKMGIELD 352
Query: 271 VVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFK 330
V +Y L +A R +EA + M++ GVRP H +Y L+ G + +AR +F+
Sbjct: 353 VYTYNTLACGLRRANRMDEAKNLLRIMIEKGVRPNHVSYTTLISIHCNEGDMVEARRLFR 412
Query: 331 CMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVN 390
M + P + +Y M+ Y+ + AE+F + +++ G VP++ +Y L+ G+
Sbjct: 413 EMAGNGAEPSLVTYNVMMDGYIKKGSIREAERFKKEMEKKGLVPDIYSYAALVHGHCVNG 472
Query: 391 NLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKN 450
++ + ++++M+ G KPN +T ++ K + A Y M G PD +
Sbjct: 473 KVDVALRLFEEMKQRGSKPNLVAYTALISGLAKEGRSEEAFQLYDNMLGDGLTPDDALYS 532
Query: 451 ILLSLAKTADERN 463
L+ T ++N
Sbjct: 533 ALVGSLHTDKKQN 545
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 87/376 (23%), Positives = 169/376 (44%), Gaps = 8/376 (2%)
Query: 101 MLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSS 160
+++ Y K G A ++L M + G + + + +L++AY R + + M++
Sbjct: 148 VVVDGYCKSGRVAHARQLLDEMPRHGVKVNALCYNSLLDAYTREKDDDRVAEMLKVMENE 207
Query: 161 GPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSP-LKPDQKMFHMMIYMYKKAGG 219
G P+ TY I++ A + E VF +E KS L D + +I Y +AG
Sbjct: 208 GIEPTVGTYTILVDGLSAARDITKVEAVF----EEMKSKNLSGDVYFYSSVINAYCRAGN 263
Query: 220 YEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSK---IYDQMQRAGLQPDVVSYAL 276
+A ++F G++ + TY +L++ ++ + MQ G+ + + +
Sbjct: 264 VRRASEVFDECVGNGIEPNEHTYGALINGFCKIGQMEAAEMLVTDMQVRGVGINQIVFNT 323
Query: 277 LINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDR 336
+I+ Y + ++AL + M G+ YN L + +D+A+ + + M
Sbjct: 324 MIDGYCRKNMVDKALEIKMIMEKMGIELDVYTYNTLACGLRRANRMDEAKNLLRIMIEKG 383
Query: 337 CSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMM 396
P+ SYTT++S + N DM A + FR + +G P+++TY ++ GY K ++ +
Sbjct: 384 VRPNHVSYTTLISIHCNEGDMVEARRLFREMAGNGAEPSLVTYNVMMDGYIKKGSIREAE 443
Query: 397 EIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLA 456
+M G+ P+ + ++ + N D A+ ++EM+ G P+ A L+S
Sbjct: 444 RFKKEMEKKGLVPDIYSYAALVHGHCVNGKVDVALRLFEEMKQRGSKPNLVAYTALISGL 503
Query: 457 KTADERNEANELLGNF 472
EA +L N
Sbjct: 504 AKEGRSEEAFQLYDNM 519
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 71/279 (25%), Positives = 127/279 (45%), Gaps = 3/279 (1%)
Query: 214 YKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKE---VSKIYDQMQRAGLQPD 270
Y K+G AR+L M GV+ + + YNSL+ T K+ V+++ M+ G++P
Sbjct: 153 YCKSGRVAHARQLLDEMPRHGVKVNALCYNSLLDAYTREKDDDRVAEMLKVMENEGIEPT 212
Query: 271 VVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFK 330
V +Y +L++ AR + AVFEEM + Y+ +++A+ +G V +A VF
Sbjct: 213 VGTYTILVDGLSAARDITKVEAVFEEMKSKNLSGDVYFYSSVINAYCRAGNVRRASEVFD 272
Query: 331 CMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVN 390
+ P+ +Y +++ + ME AE ++ G N I + T+I GY + N
Sbjct: 273 ECVGNGIEPNEHTYGALINGFCKIGQMEAAEMLVTDMQVRGVGINQIVFNTMIDGYCRKN 332
Query: 391 NLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKN 450
++K +EI M GI+ + + T+ + D A + M G P+ +
Sbjct: 333 MVDKALEIKMIMEKMGIELDVYTYNTLACGLRRANRMDEAKNLLRIMIEKGVRPNHVSYT 392
Query: 451 ILLSLAKTADERNEANELLGNFNHPNNEPGINGLSISVD 489
L+S+ + EA L EP + ++ +D
Sbjct: 393 TLISIHCNEGDMVEARRLFREMAGNGAEPSLVTYNVMMD 431
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 71/272 (26%), Positives = 114/272 (41%), Gaps = 42/272 (15%)
Query: 263 QRAGLQPDVV---SYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFA-- 317
Q A PD V S +++++ Y K+ R A + +EM GV+ YN LLDA+
Sbjct: 132 QAATSCPDSVTPLSASVVVDGYCKSGRVAHARQLLDEMPRHGVKVNALCYNSLLDAYTRE 191
Query: 318 ----------------------------ISGM-----VDQARTVFKCMRRDRCSPDICSY 344
+ G+ + + VF+ M+ S D+ Y
Sbjct: 192 KDDDRVAEMLKVMENEGIEPTVGTYTILVDGLSAARDITKVEAVFEEMKSKNLSGDVYFY 251
Query: 345 TTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRV 404
+++++AY A ++ A + F +G PN TYG LI G+ K+ +E + M+V
Sbjct: 252 SSVINAYCRAGNVRRASEVFDECVGNGIEPNEHTYGALINGFCKIGQMEAAEMLVTDMQV 311
Query: 405 NGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNE 464
G+ NQ +F T++D Y + D A+ ME G D N L + A+ +E
Sbjct: 312 RGVGINQIVFNTMIDGYCRKNMVDKALEIKMIMEKMGIELDVYTYNTLACGLRRANRMDE 371
Query: 465 ANELLGNF----NHPNNEPGINGLSISVDEED 492
A LL PN+ +SI +E D
Sbjct: 372 AKNLLRIMIEKGVRPNHVSYTTLISIHCNEGD 403
>gi|15218241|ref|NP_172439.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75097039|sp|O04491.1|PPR26_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At1g09680
gi|2160161|gb|AAB60724.1| F21M12.7 gene product [Arabidopsis thaliana]
gi|332190358|gb|AEE28479.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 607
Score = 145 bits (365), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 93/355 (26%), Positives = 169/355 (47%), Gaps = 13/355 (3%)
Query: 76 WNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHT 135
W E+L+ + + N F +L+ + K+G+ + A+KV + K+ P+VVS
Sbjct: 225 WGFYMEILD-----AGFPLNVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFN 279
Query: 136 ALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDE 195
L+ Y + G + +M+ S RP TY ++ + NK A +F DE
Sbjct: 280 TLINGYCKVGNLDEGFRLKHQMEKSRTRPDVFTYSALINALCKENKMDGAHGLF----DE 335
Query: 196 E-KSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMS-FETNYK 253
K L P+ +F +I+ + + G + ++ + M +G+Q V YN+L++ F N
Sbjct: 336 MCKRGLIPNDVIFTTLIHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGD 395
Query: 254 EVS--KIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNI 311
V+ I D M R GL+PD ++Y LI+ + + E AL + +EM G+ ++
Sbjct: 396 LVAARNIVDGMIRRGLRPDKITYTTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSA 455
Query: 312 LLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDG 371
L+ G V A + M R PD +YT M+ A+ D + K + ++ DG
Sbjct: 456 LVCGMCKEGRVIDAERALREMLRAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDG 515
Query: 372 FVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKD 426
VP+V+TY L+ G K+ ++ + D M G+ P+ + T+++ + ++ +
Sbjct: 516 HVPSVVTYNVLLNGLCKLGQMKNADMLLDAMLNIGVVPDDITYNTLLEGHHRHAN 570
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 77/297 (25%), Positives = 138/297 (46%), Gaps = 39/297 (13%)
Query: 206 MFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFET---NYKEVSKIYDQM 262
+F++++ + K G A+K+F + +R +Q + V++N+L++ N E ++ QM
Sbjct: 242 VFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLDEGFRLKHQM 301
Query: 263 QRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMV 322
+++ +PDV +Y+ LINA K + + A +F+EM G+ P + L+ + +G +
Sbjct: 302 EKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHSRNGEI 361
Query: 323 DQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTL 382
D + ++ M PDI Y T+++ + D+ A + + G P+ ITY TL
Sbjct: 362 DLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKITYTTL 421
Query: 383 IKGYAKVNNLEKMMEIYDKMRVN-----------------------------------GI 407
I G+ + ++E +EI +M N GI
Sbjct: 422 IDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALREMLRAGI 481
Query: 408 KPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLS-LAKTADERN 463
KP+ +T +MDA+ K D + KEM+S G P N+LL+ L K +N
Sbjct: 482 KPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVLLNGLCKLGQMKN 538
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 66/287 (22%), Positives = 133/287 (46%), Gaps = 5/287 (1%)
Query: 170 QIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFAL 229
Q +++L V A VF++L++ +P+ + ++ Y G A + F L
Sbjct: 138 QSLIELVVSRKGKNSASSVFISLVEMRVTPMC--GFLVDALMITYTDLGFIPDAIQCFRL 195
Query: 230 MAERGVQQSTVTYNSLMSFETNYKEVSKI---YDQMQRAGLQPDVVSYALLINAYGKARR 286
+ +L+ I Y ++ AG +V + +L+N + K
Sbjct: 196 SRKHRFDVPIRGCGNLLDRMMKLNPTGTIWGFYMEILDAGFPLNVYVFNILMNKFCKEGN 255
Query: 287 EEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTT 346
+A VF+E+ ++PT ++N L++ + G +D+ + M + R PD+ +Y+
Sbjct: 256 ISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLDEGFRLKHQMEKSRTRPDVFTYSA 315
Query: 347 MLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNG 406
+++A + M+GA F + + G +PN + + TLI G+++ ++ M E Y KM G
Sbjct: 316 LINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHSRNGEIDLMKESYQKMLSKG 375
Query: 407 IKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILL 453
++P+ ++ T+++ + KN D +A M G PD+ L+
Sbjct: 376 LQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKITYTTLI 422
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 112/224 (50%), Gaps = 3/224 (1%)
Query: 234 GVQQSTVTYNSLM---SFETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEA 290
G + +N LM E N + K++D++ + LQP VVS+ LIN Y K +E
Sbjct: 235 GFPLNVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLDEG 294
Query: 291 LAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSA 350
+ +M + RP Y+ L++A +D A +F M + P+ +TT++
Sbjct: 295 FRLKHQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHG 354
Query: 351 YVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPN 410
+ +++ ++ ++++ G P+++ Y TL+ G+ K +L I D M G++P+
Sbjct: 355 HSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPD 414
Query: 411 QTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLS 454
+ +TT++D + + D ++A+ KEM+ G D+ + L+
Sbjct: 415 KITYTTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVC 458
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 82/161 (50%)
Query: 294 FEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVN 353
+ E+LDAG +NIL++ F G + A+ VF + + P + S+ T+++ Y
Sbjct: 228 YMEILDAGFPLNVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCK 287
Query: 354 ASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTI 413
+++ + ++++ P+V TY LI K N ++ ++D+M G+ PN I
Sbjct: 288 VGNLDEGFRLKHQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVI 347
Query: 414 FTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLS 454
FTT++ + +N + D Y++M S G PD N L++
Sbjct: 348 FTTLIHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVN 388
Score = 65.1 bits (157), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 46/194 (23%), Positives = 88/194 (45%), Gaps = 3/194 (1%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
+++ + LI + + GD A ++ M++ G V +AL+ + GR +AE
Sbjct: 414 DKITYTTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERAL 473
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
R M +G +P +TY +++ F + +A+ F L + + P +++++
Sbjct: 474 REMLRAGIKPDDVTYTMMMDAFCKKG---DAQTGFKLLKEMQSDGHVPSVVTYNVLLNGL 530
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSKIYDQMQRAGLQPDVVSY 274
K G + A L M GV +TYN+L+ + SK Y Q G+ D+ SY
Sbjct: 531 CKLGQMKNADMLLDAMLNIGVVPDDITYNTLLEGHHRHANSSKRYIQKPEIGIVADLASY 590
Query: 275 ALLINAYGKARREE 288
++N +A ++
Sbjct: 591 KSIVNELDRASKDH 604
>gi|125548475|gb|EAY94297.1| hypothetical protein OsI_16066 [Oryza sativa Indica Group]
Length = 602
Score = 144 bits (364), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 94/372 (25%), Positives = 180/372 (48%), Gaps = 7/372 (1%)
Query: 101 MLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSS 160
+L+ A K + +A +++ M +G P+ V++ LM+ G +A + R + S
Sbjct: 207 ILLEATCKGRGYRQAMELIDLMRAEGCTPNNVTYNVLMDGMCGEGDVDDALELLRNLPSH 266
Query: 161 GPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGY 220
G +PS + Y +LK A ++ +A+E+ +L E P++ F+++IY + G
Sbjct: 267 GCKPSTVNYNTVLKGLCSAERWGDADELVTEMLREN---CPPNEATFNVVIYSLCRKGLL 323
Query: 221 EKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSK---IYDQMQRAGLQPDVVSYALL 277
++A +L M++ G + VTYN++++ + V + +M+ G +PD+V+Y L
Sbjct: 324 QQAIQLLEKMSKHGCTANIVTYNAIINGLCEQRNVDGAMGLLSKMKSYGCKPDIVTYNTL 383
Query: 278 INAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRC 337
+ A + +A + + M G P + +N L+ G++ A VFK M C
Sbjct: 384 LKGLCSAAQWVDAEELMDNMTQNGCLPDNVTFNTLIGFLCQKGLMVDAIEVFKQMPDKGC 443
Query: 338 SPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMME 397
+P+ +Y+T++S A+ ++ A + F + GF P+ I Y L + + +E+ ++
Sbjct: 444 TPNSITYSTIISGLAKATKLDQALELFNEMGHKGFNPDKI-YQLLAECLNDDDTIEEAIQ 502
Query: 398 IYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAK 457
K++ +GI P+ ++ I+ +N + A+ M S G PD IL+
Sbjct: 503 TVRKLQDSGISPHTVLYNAILLGLCRNGKTEFAIDIMAYMVSSGCMPDDLTYVILIEGLA 562
Query: 458 TADERNEANELL 469
NEA ELL
Sbjct: 563 YEGYLNEARELL 574
Score = 139 bits (349), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 94/382 (24%), Positives = 174/382 (45%), Gaps = 14/382 (3%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
L+ ++G + AE+V+ G A +VV++ AL + Y R GR +A RR+
Sbjct: 109 LVRDLCRRGRPDDAERVVGAC---GPAATVVAYGALTDGYCRAGRLGDA----RRVVGGM 161
Query: 162 P-RPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGY 220
P +P+A TY ++ E + ++A V +L +P D +++++ K GY
Sbjct: 162 PVQPNAYTYNPLIHTLCERGQVRDALSVLDDMLCRGCAP---DVVTYNILLEATCKGRGY 218
Query: 221 EKARKLFALMAERGVQQSTVTYNSLM---SFETNYKEVSKIYDQMQRAGLQPDVVSYALL 277
+A +L LM G + VTYN LM E + + ++ + G +P V+Y +
Sbjct: 219 RQAMELIDLMRAEGCTPNNVTYNVLMDGMCGEGDVDDALELLRNLPSHGCKPSTVNYNTV 278
Query: 278 INAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRC 337
+ A R +A + EML P +N+++ + G++ QA + + M + C
Sbjct: 279 LKGLCSAERWGDADELVTEMLRENCPPNEATFNVVIYSLCRKGLLQQAIQLLEKMSKHGC 338
Query: 338 SPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMME 397
+ +I +Y +++ +++GA ++K G P+++TY TL+KG E
Sbjct: 339 TANIVTYNAIINGLCEQRNVDGAMGLLSKMKSYGCKPDIVTYNTLLKGLCSAAQWVDAEE 398
Query: 398 IYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAK 457
+ D M NG P+ F T++ + A+ +K+M G P+ + ++S
Sbjct: 399 LMDNMTQNGCLPDNVTFNTLIGFLCQKGLMVDAIEVFKQMPDKGCTPNSITYSTIISGLA 458
Query: 458 TADERNEANELLGNFNHPNNEP 479
A + ++A EL H P
Sbjct: 459 KATKLDQALELFNEMGHKGFNP 480
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 86/384 (22%), Positives = 171/384 (44%), Gaps = 24/384 (6%)
Query: 7 RKFMQKRRKVEVFKDAADEAGKKNWRRLMNQI---EEVGSAVAVLRSERTRGQPLPKDLV 63
R + Q +++ + + LM+ + +V A+ +LR+ + G P +
Sbjct: 216 RGYRQAMELIDLMRAEGCTPNNVTYNVLMDGMCGEGDVDDALELLRNLPSHGCK-PSTVN 274
Query: 64 LGTLVR-LKQLKKWNVVSE-VLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSF 121
T+++ L ++W E V E LR NE F ++I + ++G +A ++L
Sbjct: 275 YNTVLKGLCSAERWGDADELVTEMLR--ENCPPNEATFNVVIYSLCRKGLLQQAIQLLEK 332
Query: 122 MNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANK 181
M+K G ++V++ A++ A + +M+S G +P +TY +LK A +
Sbjct: 333 MSKHGCTANIVTYNAIINGLCEQRNVDGAMGLLSKMKSYGCKPDIVTYNTLLKGLCSAAQ 392
Query: 182 FKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVT 241
+ +AEE+ + ++ PD F+ +I + G A ++F M ++G +++T
Sbjct: 393 WVDAEELMDNM---TQNGCLPDNVTFNTLIGFLCQKGLMVDAIEVFKQMPDKGCTPNSIT 449
Query: 242 YNSLMSF---ETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEML 298
Y++++S T + +++++M G PD + Y LL EEA+ ++
Sbjct: 450 YSTIISGLAKATKLDQALELFNEMGHKGFNPDKI-YQLLAECLNDDDTIEEAIQTVRKLQ 508
Query: 299 DAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTML-----SAYVN 353
D+G+ P YN +L +G + A + M C PD +Y ++ Y+N
Sbjct: 509 DSGISPHTVLYNAILLGLCRNGKTEFAIDIMAYMVSSGCMPDDLTYVILIEGLAYEGYLN 568
Query: 354 ASDMEGAEKFFRRLKQDGFVPNVI 377
E E + +D V ++I
Sbjct: 569 ----EARELLIKLCSRDVLVNSLI 588
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 72/357 (20%), Positives = 146/357 (40%), Gaps = 37/357 (10%)
Query: 81 EVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEA 140
E+++ +R + N + + +L+ +GD + A ++L + G PS V++ +++
Sbjct: 223 ELIDLMRAEGCTP-NNVTYNVLMDGMCGEGDVDDALELLRNLPSHGCKPSTVNYNTVLKG 281
Query: 141 YGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVF----------- 189
R+ +A+ + M P+ T+ +++ ++A ++
Sbjct: 282 LCSAERWGDADELVTEMLRENCPPNEATFNVVIYSLCRKGLLQQAIQLLEKMSKHGCTAN 341
Query: 190 --------------------MTLLDEEKS-PLKPDQKMFHMMIYMYKKAGGYEKARKLFA 228
M LL + KS KPD ++ ++ A + A +L
Sbjct: 342 IVTYNAIINGLCEQRNVDGAMGLLSKMKSYGCKPDIVTYNTLLKGLCSAAQWVDAEELMD 401
Query: 229 LMAERGVQQSTVTYNSLMSFETN---YKEVSKIYDQMQRAGLQPDVVSYALLINAYGKAR 285
M + G VT+N+L+ F + +++ QM G P+ ++Y+ +I+ KA
Sbjct: 402 NMTQNGCLPDNVTFNTLIGFLCQKGLMVDAIEVFKQMPDKGCTPNSITYSTIISGLAKAT 461
Query: 286 REEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYT 345
+ ++AL +F EM G P K Y +L + +++A + ++ SP Y
Sbjct: 462 KLDQALELFNEMGHKGFNP-DKIYQLLAECLNDDDTIEEAIQTVRKLQDSGISPHTVLYN 520
Query: 346 TMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKM 402
+L E A + G +P+ +TY LI+G A L + E+ K+
Sbjct: 521 AILLGLCRNGKTEFAIDIMAYMVSSGCMPDDLTYVILIEGLAYEGYLNEARELLIKL 577
>gi|357436523|ref|XP_003588537.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355477585|gb|AES58788.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 653
Score = 144 bits (364), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 103/440 (23%), Positives = 207/440 (47%), Gaps = 26/440 (5%)
Query: 50 SERTRGQPLPKDLVLGTLVRLKQLKKWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQ 109
++T G + +L L+ + + NV+ + L I+ + + + L+ A Q
Sbjct: 67 CKKTCGVVCSRTKLLNILIVCGKPQAANVIFKKL----IEEGHQPSLITYTSLLHALTMQ 122
Query: 110 GDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTY 169
F ++S + +K + + + A++ A+ G ++A+ ++M+ SG RPS TY
Sbjct: 123 KCFKSIHSLVSQVEEKQMKTNSIFYNAVINAFAESGNMEDAKKTVQKMKESGFRPSTGTY 182
Query: 170 QIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFAL 229
++K + K EA ++ +L + S KPD + ++M+I ++G +A +
Sbjct: 183 SNLIKGYGIVGKSGEAMKLLDLMLTDGNS--KPDLQTYNMLIKALCQSGNMSEAWNIVCK 240
Query: 230 MAERGVQQSTVTYNSLM---SFETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARR 286
M G+ +VT+N++ + E + +MQR GL+P+ ++ +++N Y K +
Sbjct: 241 MPASGMLPDSVTFNTMAIGYVLNSETAEAEAMILEMQRKGLEPNERTFTVIVNGYYKEGQ 300
Query: 287 EEEALAVFEEMLDAGVRPTHKAYNILLDAFA----------ISGMVDQ-------ARTVF 329
+EAL + D G +P +N+L++ F S Q V
Sbjct: 301 IKEALQFVYRIKDLGFKPNLLVFNVLINGFVDRMDRDGVDEFSNTFAQEGKNQVTTPLVL 360
Query: 330 KCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKV 389
+ M+ + PD+ +Y+T+++A+ A + ++ F + Q G P+V Y L+KGY +
Sbjct: 361 RLMKEFQIQPDVVTYSTIMNAWSQAGFQDKCKQIFDNMLQSGVKPDVHAYSILVKGYVRS 420
Query: 390 NNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAK 449
EK E+ M +G++PN FT ++ +G + D+A+ + +M G P+ +
Sbjct: 421 METEKAEELLGDMIESGVRPNVVTFTNVISGWGSSGRMDNAIKIFDKMCELGVSPNLRTF 480
Query: 450 NILLSLAKTADERNEANELL 469
L+ AD+ ++ E+L
Sbjct: 481 EALIWGYAKADQPWKSEEIL 500
Score = 124 bits (312), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 85/341 (24%), Positives = 171/341 (50%), Gaps = 24/341 (7%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYA-PSVVSHTALMEAYGRGGRYKNAEAIFRRMQSS 160
LI YG G +A K+L M G + P + ++ L++A + G A I +M +S
Sbjct: 185 LIKGYGIVGKSGEAMKLLDLMLTDGNSKPDLQTYNMLIKALCQSGNMSEAWNIVCKMPAS 244
Query: 161 GPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGY 220
G P ++T+ + +V ++ EAE + +L+ ++ L+P+++ F +++ Y K G
Sbjct: 245 GMLPDSVTFNTMAIGYVLNSETAEAEAM---ILEMQRKGLEPNERTFTVIVNGYYKEGQI 301
Query: 221 EKARKLFALMAERGVQQSTVTYNSLMS-------------FETNYKEVSK-------IYD 260
++A + + + G + + + +N L++ F + + K +
Sbjct: 302 KEALQFVYRIKDLGFKPNLLVFNVLINGFVDRMDRDGVDEFSNTFAQEGKNQVTTPLVLR 361
Query: 261 QMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISG 320
M+ +QPDVV+Y+ ++NA+ +A +++ +F+ ML +GV+P AY+IL+ + S
Sbjct: 362 LMKEFQIQPDVVTYSTIMNAWSQAGFQDKCKQIFDNMLQSGVKPDVHAYSILVKGYVRSM 421
Query: 321 MVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYG 380
++A + M P++ ++T ++S + ++ M+ A K F ++ + G PN+ T+
Sbjct: 422 ETEKAEELLGDMIESGVRPNVVTFTNVISGWGSSGRMDNAIKIFDKMCELGVSPNLRTFE 481
Query: 381 TLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAY 421
LI GYAK + K EI M + P ++ F + A+
Sbjct: 482 ALIWGYAKADQPWKSEEILQLMEEFHVHPKKSTFLLVSKAW 522
Score = 111 bits (278), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 90/392 (22%), Positives = 172/392 (43%), Gaps = 24/392 (6%)
Query: 111 DFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQ 170
+++ ++ +F K V S T L+ G+ + A IF+++ G +PS +TY
Sbjct: 54 EYSGSKLTCTFCICKKTCGVVCSRTKLLNILIVCGKPQAANVIFKKLIEEGHQPSLITYT 113
Query: 171 IILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALM 230
+L FK + + E+ +K + ++ +I + ++G E A+K M
Sbjct: 114 SLLHALTMQKCFKSIHSLVSQV---EEKQMKTNSIFYNAVINAFAESGNMEDAKKTVQKM 170
Query: 231 AERGVQQSTVTYNSLM---SFETNYKEVSKIYDQMQRAG-LQPDVVSYALLINAYGKARR 286
E G + ST TY++L+ E K+ D M G +PD+ +Y +LI A ++
Sbjct: 171 KESGFRPSTGTYSNLIKGYGIVGKSGEAMKLLDLMLTDGNSKPDLQTYNMLIKALCQSGN 230
Query: 287 EEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTT 346
EA + +M +G+ P +N + + ++ +A + M+R P+ ++T
Sbjct: 231 MSEAWNIVCKMPASGMLPDSVTFNTMAIGYVLNSETAEAEAMILEMQRKGLEPNERTFTV 290
Query: 347 MLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNG 406
+++ Y ++ A +F R+K GF PN++ + LI G+ + + + E + G
Sbjct: 291 IVNGYYKEGQIKEALQFVYRIKDLGFKPNLLVFNVLINGFVDRMDRDGVDEFSNTFAQEG 350
Query: 407 -----------------IKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAK 449
I+P+ ++TIM+A+ + D + M G PD A
Sbjct: 351 KNQVTTPLVLRLMKEFQIQPDVVTYSTIMNAWSQAGFQDKCKQIFDNMLQSGVKPDVHAY 410
Query: 450 NILLSLAKTADERNEANELLGNFNHPNNEPGI 481
+IL+ + E +A ELLG+ P +
Sbjct: 411 SILVKGYVRSMETEKAEELLGDMIESGVRPNV 442
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/251 (22%), Positives = 119/251 (47%), Gaps = 23/251 (9%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAY----GRGG--RYK 148
NE F +++ Y K+G +A + + + G+ P+++ L+ + R G +
Sbjct: 284 NERTFTVIVNGYYKEGQIKEALQFVYRIKDLGFKPNLLVFNVLINGFVDRMDRDGVDEFS 343
Query: 149 NAEA-----------IFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEK 197
N A + R M+ +P +TY I+ + +A + +++F +L +
Sbjct: 344 NTFAQEGKNQVTTPLVLRLMKEFQIQPDVVTYSTIMNAWSQAGFQDKCKQIFDNML---Q 400
Query: 198 SPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMS---FETNYKE 254
S +KPD + +++ Y ++ EKA +L M E GV+ + VT+ +++S
Sbjct: 401 SGVKPDVHAYSILVKGYVRSMETEKAEELLGDMIESGVRPNVVTFTNVISGWGSSGRMDN 460
Query: 255 VSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLD 314
KI+D+M G+ P++ ++ LI Y KA + ++ + + M + V P + ++
Sbjct: 461 AIKIFDKMCELGVSPNLRTFEALIWGYAKADQPWKSEEILQLMEEFHVHPKKSTFLLVSK 520
Query: 315 AFAISGMVDQA 325
A+ +G+ ++A
Sbjct: 521 AWRFAGLTEEA 531
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 49/220 (22%), Positives = 97/220 (44%), Gaps = 1/220 (0%)
Query: 271 VVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFK 330
V S L+N + + A +F+++++ G +P+ Y LL A + ++
Sbjct: 74 VCSRTKLLNILIVCGKPQAANVIFKKLIEEGHQPSLITYTSLLHALTMQKCFKSIHSLVS 133
Query: 331 CMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVN 390
+ + + Y +++A+ + +ME A+K +++K+ GF P+ TY LIKGY V
Sbjct: 134 QVEEKQMKTNSIFYNAVINAFAESGNMEDAKKTVQKMKESGFRPSTGTYSNLIKGYGIVG 193
Query: 391 NLEKMMEIYDKMRVNG-IKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAK 449
+ M++ D M +G KP+ + ++ A ++ + A +M + G PD
Sbjct: 194 KSGEAMKLLDLMLTDGNSKPDLQTYNMLIKALCQSGNMSEAWNIVCKMPASGMLPDSVTF 253
Query: 450 NILLSLAKTADERNEANELLGNFNHPNNEPGINGLSISVD 489
N + E EA ++ EP ++ V+
Sbjct: 254 NTMAIGYVLNSETAEAEAMILEMQRKGLEPNERTFTVIVN 293
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 72/131 (54%), Gaps = 3/131 (2%)
Query: 99 FLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQ 158
+ +L+ Y + + KAE++L M + G P+VV+ T ++ +G GR NA IF +M
Sbjct: 410 YSILVKGYVRSMETEKAEELLGDMIESGVRPNVVTFTNVISGWGSSGRMDNAIKIFDKMC 469
Query: 159 SSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAG 218
G P+ T++ ++ + +A++ ++EE+ + E+ + P + F ++ ++ AG
Sbjct: 470 ELGVSPNLRTFEALIWGYAKADQPWKSEEILQLM---EEFHVHPKKSTFLLVSKAWRFAG 526
Query: 219 GYEKARKLFAL 229
E+A +L ++
Sbjct: 527 LTEEAIRLRSI 537
>gi|299471515|emb|CBN80001.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 687
Score = 144 bits (364), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 92/372 (24%), Positives = 178/372 (47%), Gaps = 8/372 (2%)
Query: 103 ITAYGKQGDFNKAEKVLSFM--NKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSS 160
I A K G + +A +L+ M +G P VV++ + + A GGR+K A + +M +
Sbjct: 152 IAACSKGGRWKEAMDLLTQMVAPTEGITPDVVTYNSAIAACSNGGRWKEAMDLLEQMVAQ 211
Query: 161 GPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGY 220
G P+ +TY + + +++EA ++ ++++ P + ++ +I K G +
Sbjct: 212 GVPPNLITYNSAIGACAKGRRWEEAMDLLEEVIEQG---FPPSTRTYNPVIDACAKGGRW 268
Query: 221 EKARKLFALMAERGVQQSTVTYNSLMSF---ETNYKEVSKIYDQMQRAGLQPDVVSYALL 277
+A L M + ++Y+S+++ +KE + +QM+ G+ P+V+SY
Sbjct: 269 LEAMDLLGQMLTNDIPADVISYSSVIAACGRGRRWKEAMDLLEQMRTQGVSPNVISYNSA 328
Query: 278 INAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRC 337
I+A K R +EAL + EM G+ PT +YN A A++G +A + K M
Sbjct: 329 IDACAKGDRWKEALDLLREMTTVGLVPTVISYNSATAACAVNGRWVEALELLKEMPAQGI 388
Query: 338 SPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMME 397
+P+ SY + L A E A K R + G P++I++ + I + E +E
Sbjct: 389 APNTISYNSALDACAKGGQWEKAVKLLRGMSTVGSDPDIISFNSAIDACGRGQQWETAVE 448
Query: 398 IYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAK 457
+ +M G+ PN + + ++A G++ + A+ ++EM + G P+ N ++
Sbjct: 449 LLREMPTAGLTPNVITYNSAIEACGRSARWQEAMGLFREMPTRGLSPNVVTYNSMIDACA 508
Query: 458 TADERNEANELL 469
++ A +LL
Sbjct: 509 KGEQWELAVQLL 520
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 93/386 (24%), Positives = 176/386 (45%), Gaps = 6/386 (1%)
Query: 97 MDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRR 156
+ + +I A G+ + +A +L M +G +P+V+S+ + ++A +G R+K A + R
Sbjct: 288 ISYSSVIAACGRGRRWKEAMDLLEQMRTQGVSPNVISYNSAIDACAKGDRWKEALDLLRE 347
Query: 157 MQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKK 216
M + G P+ ++Y ++ EA E+ + + + P+ ++ + K
Sbjct: 348 MTTVGLVPTVISYNSATAACAVNGRWVEALELLKEMPAQG---IAPNTISYNSALDACAK 404
Query: 217 AGGYEKARKLFALMAERGVQQSTVTYNSLM---SFETNYKEVSKIYDQMQRAGLQPDVVS 273
G +EKA KL M+ G +++NS + ++ ++ +M AGL P+V++
Sbjct: 405 GGQWEKAVKLLRGMSTVGSDPDIISFNSAIDACGRGQQWETAVELLREMPTAGLTPNVIT 464
Query: 274 YALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMR 333
Y I A G++ R +EA+ +F EM G+ P YN ++DA A + A + M
Sbjct: 465 YNSAIEACGRSARWQEAMGLFREMPTRGLSPNVVTYNSMIDACAKGEQWELAVQLLTGMP 524
Query: 334 RDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLE 393
+PD+ SY + + A E A + + + G P++I+Y + + AK
Sbjct: 525 ARGVAPDVISYNSAIEACGKGEQWELALQLLKGMPTRGPKPDIISYNSAVTACAKSGRWR 584
Query: 394 KMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILL 453
+ + + M G+ PN + + A GK + +D AV KEM++ G P+ + +
Sbjct: 585 EALGLLKDMATVGLTPNTVSYGAAIHACGKGEQWDVAVRILKEMQTHGATPNLITYSAAI 644
Query: 454 SLAKTADERNEANELLGNFNHPNNEP 479
EA +LL + P
Sbjct: 645 DACAKQGRWKEAVDLLTDLRRQGLTP 670
Score = 131 bits (330), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 90/393 (22%), Positives = 180/393 (45%), Gaps = 10/393 (2%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
+I A K G + +A +L M V+S+++++ A GRG R+K A + +M++ G
Sbjct: 258 VIDACAKGGRWLEAMDLLGQMLTNDIPADVISYSSVIAACGRGRRWKEAMDLLEQMRTQG 317
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVF--MTLLDEEKSPLKPDQKMFHMMIYMYKKAGG 219
P+ ++Y + + +++KEA ++ MT + L P ++ G
Sbjct: 318 VSPNVISYNSAIDACAKGDRWKEALDLLREMTTVG-----LVPTVISYNSATAACAVNGR 372
Query: 220 YEKARKLFALMAERGVQQSTVTYNSLM---SFETNYKEVSKIYDQMQRAGLQPDVVSYAL 276
+ +A +L M +G+ +T++YNS + + +++ K+ M G PD++S+
Sbjct: 373 WVEALELLKEMPAQGIAPNTISYNSALDACAKGGQWEKAVKLLRGMSTVGSDPDIISFNS 432
Query: 277 LINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDR 336
I+A G+ ++ E A+ + EM AG+ P YN ++A S +A +F+ M
Sbjct: 433 AIDACGRGQQWETAVELLREMPTAGLTPNVITYNSAIEACGRSARWQEAMGLFREMPTRG 492
Query: 337 CSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMM 396
SP++ +Y +M+ A E A + + G P+VI+Y + I+ K E +
Sbjct: 493 LSPNVVTYNSMIDACAKGEQWELAVQLLTGMPARGVAPDVISYNSAIEACGKGEQWELAL 552
Query: 397 EIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLA 456
++ M G KP+ + + + A K+ + A+ K+M + G P+ + +
Sbjct: 553 QLLKGMPTRGPKPDIISYNSAVTACAKSGRWREALGLLKDMATVGLTPNTVSYGAAIHAC 612
Query: 457 KTADERNEANELLGNFNHPNNEPGINGLSISVD 489
++ + A +L P + S ++D
Sbjct: 613 GKGEQWDVAVRILKEMQTHGATPNLITYSAAID 645
Score = 126 bits (316), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 80/325 (24%), Positives = 155/325 (47%), Gaps = 6/325 (1%)
Query: 105 AYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRP 164
A G + +A ++L M +G AP+ +S+ + ++A +GG+++ A + R M + G P
Sbjct: 366 ACAVNGRWVEALELLKEMPAQGIAPNTISYNSALDACAKGGQWEKAVKLLRGMSTVGSDP 425
Query: 165 SALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKAR 224
+++ + +++ A E+ L + + L P+ ++ I ++ +++A
Sbjct: 426 DIISFNSAIDACGRGQQWETAVEL---LREMPTAGLTPNVITYNSAIEACGRSARWQEAM 482
Query: 225 KLFALMAERGVQQSTVTYNSLMSFET---NYKEVSKIYDQMQRAGLQPDVVSYALLINAY 281
LF M RG+ + VTYNS++ ++ ++ M G+ PDV+SY I A
Sbjct: 483 GLFREMPTRGLSPNVVTYNSMIDACAKGEQWELAVQLLTGMPARGVAPDVISYNSAIEAC 542
Query: 282 GKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDI 341
GK + E AL + + M G +P +YN + A A SG +A + K M +P+
Sbjct: 543 GKGEQWELALQLLKGMPTRGPKPDIISYNSAVTACAKSGRWREALGLLKDMATVGLTPNT 602
Query: 342 CSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDK 401
SY + A + A + + ++ G PN+ITY I AK ++ +++
Sbjct: 603 VSYGAAIHACGKGEQWDVAVRILKEMQTHGATPNLITYSAAIDACAKQGRWKEAVDLLTD 662
Query: 402 MRVNGIKPNQTIFTTIMDAYGKNKD 426
+R G+ P+ + T++ A+ + D
Sbjct: 663 LRRQGLTPDAQTYLTVISAFQRCSD 687
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 92/387 (23%), Positives = 175/387 (45%), Gaps = 11/387 (2%)
Query: 109 QGDFNKAEKVLSFMNKKGYAPSVVS-HTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSAL 167
+G + + ++ G S+V + L+EA GR ++ A A + SG
Sbjct: 54 EGSLEPSTRSRGAASRGGKPKSLVKLKSILLEAKGR--DWRTALAALDEFKISGGSLDTT 111
Query: 168 TYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLF 227
+Y I + ++ A + + E + PD ++ I K G +++A L
Sbjct: 112 SYNIAIAACSNGRQWATAVRLLREMPTEG---VTPDVVTYNSAIAACSKGGRWKEAMDLL 168
Query: 228 ALMA--ERGVQQSTVTYNSLMSFETN---YKEVSKIYDQMQRAGLQPDVVSYALLINAYG 282
M G+ VTYNS ++ +N +KE + +QM G+ P++++Y I A
Sbjct: 169 TQMVAPTEGITPDVVTYNSAIAACSNGGRWKEAMDLLEQMVAQGVPPNLITYNSAIGACA 228
Query: 283 KARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDIC 342
K RR EEA+ + EE+++ G P+ + YN ++DA A G +A + M + D+
Sbjct: 229 KGRRWEEAMDLLEEVIEQGFPPSTRTYNPVIDACAKGGRWLEAMDLLGQMLTNDIPADVI 288
Query: 343 SYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKM 402
SY+++++A + A +++ G PNVI+Y + I AK + ++ +++ +M
Sbjct: 289 SYSSVIAACGRGRRWKEAMDLLEQMRTQGVSPNVISYNSAIDACAKGDRWKEALDLLREM 348
Query: 403 RVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADER 462
G+ P + + A N + A+ KEM + G P+ + N L +
Sbjct: 349 TTVGLVPTVISYNSATAACAVNGRWVEALELLKEMPAQGIAPNTISYNSALDACAKGGQW 408
Query: 463 NEANELLGNFNHPNNEPGINGLSISVD 489
+A +LL + ++P I + ++D
Sbjct: 409 EKAVKLLRGMSTVGSDPDIISFNSAID 435
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 93/387 (24%), Positives = 163/387 (42%), Gaps = 49/387 (12%)
Query: 101 MLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSS 160
+L+ A G+ D+ A L G + S+ + A G ++ A + R M +
Sbjct: 82 ILLEAKGR--DWRTALAALDEFKISGGSLDTTSYNIAIAACSNGRQWATAVRLLREMPTE 139
Query: 161 GPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSP---LKPDQKMFHMMIYMYKKA 217
G P +TY + + ++KEA M LL + +P + PD ++ I
Sbjct: 140 GVTPDVVTYNSAIAACSKGGRWKEA----MDLLTQMVAPTEGITPDVVTYNSAIAACSNG 195
Query: 218 GGYEKARKLFALMAERGVQQSTVTYNSLM----------------------SFETNYKEV 255
G +++A L M +GV + +TYNS + F + +
Sbjct: 196 GRWKEAMDLLEQMVAQGVPPNLITYNSAIGACAKGRRWEEAMDLLEEVIEQGFPPSTRTY 255
Query: 256 SKIYDQMQRAG----------------LQPDVVSYALLINAYGKARREEEALAVFEEMLD 299
+ + D + G + DV+SY+ +I A G+ RR +EA+ + E+M
Sbjct: 256 NPVIDACAKGGRWLEAMDLLGQMLTNDIPADVISYSSVIAACGRGRRWKEAMDLLEQMRT 315
Query: 300 AGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAY-VNASDME 358
GV P +YN +DA A +A + + M P + SY + +A VN +E
Sbjct: 316 QGVSPNVISYNSAIDACAKGDRWKEALDLLREMTTVGLVPTVISYNSATAACAVNGRWVE 375
Query: 359 GAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIM 418
E + + G PN I+Y + + AK EK +++ M G P+ F + +
Sbjct: 376 ALE-LLKEMPAQGIAPNTISYNSALDACAKGGQWEKAVKLLRGMSTVGSDPDIISFNSAI 434
Query: 419 DAYGKNKDFDSAVVWYKEMESCGFPPD 445
DA G+ + +++AV +EM + G P+
Sbjct: 435 DACGRGQQWETAVELLREMPTAGLTPN 461
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 91/390 (23%), Positives = 164/390 (42%), Gaps = 41/390 (10%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + + I A K + +A +L + ++G+ PS ++ +++A +GGR+ A +
Sbjct: 216 NLITYNSAIGACAKGRRWEEAMDLLEEVIEQGFPPSTRTYNPVIDACAKGGRWLEAMDLL 275
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
+M ++ ++Y ++ ++KEA M LL++
Sbjct: 276 GQMLTNDIPADVISYSSVIAACGRGRRWKEA----MDLLEQ------------------- 312
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETN---YKEVSKIYDQMQRAGLQPDV 271
M +GV + ++YNS + +KE + +M GL P V
Sbjct: 313 ---------------MRTQGVSPNVISYNSAIDACAKGDRWKEALDLLREMTTVGLVPTV 357
Query: 272 VSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKC 331
+SY A R EAL + +EM G+ P +YN LDA A G ++A + +
Sbjct: 358 ISYNSATAACAVNGRWVEALELLKEMPAQGIAPNTISYNSALDACAKGGQWEKAVKLLRG 417
Query: 332 MRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNN 391
M PDI S+ + + A E A + R + G PNVITY + I+ +
Sbjct: 418 MSTVGSDPDIISFNSAIDACGRGQQWETAVELLREMPTAGLTPNVITYNSAIEACGRSAR 477
Query: 392 LEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNI 451
++ M ++ +M G+ PN + +++DA K + ++ AV M + G PD + N
Sbjct: 478 WQEAMGLFREMPTRGLSPNVVTYNSMIDACAKGEQWELAVQLLTGMPARGVAPDVISYNS 537
Query: 452 LLSLAKTADERNEANELLGNFNHPNNEPGI 481
+ ++ A +LL +P I
Sbjct: 538 AIEACGKGEQWELALQLLKGMPTRGPKPDI 567
Score = 45.4 bits (106), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 43/82 (52%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + + I A GK ++ A ++L M G P++++++A ++A + GR+K A +
Sbjct: 601 NTVSYGAAIHACGKGEQWDVAVRILKEMQTHGATPNLITYSAAIDACAKQGRWKEAVDLL 660
Query: 155 RRMQSSGPRPSALTYQIILKLF 176
++ G P A TY ++ F
Sbjct: 661 TDLRRQGLTPDAQTYLTVISAF 682
>gi|255575351|ref|XP_002528578.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223531974|gb|EEF33786.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 817
Score = 144 bits (364), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 98/356 (27%), Positives = 157/356 (44%), Gaps = 42/356 (11%)
Query: 101 MLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSS 160
+L+ KQG KAE++L + G V + + Y R G A RM+S
Sbjct: 356 ILLNGLCKQGKVEKAEEILKKFTENGLVADEVIYNTFVNGYCRIGDMNKAILTIERMESF 415
Query: 161 GPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGY 220
G RP+++T+ ++ +KF + +E+
Sbjct: 416 GLRPNSITFNSLI------DKFCDMKEM-------------------------------- 437
Query: 221 EKARKLFALMAERGVQQSTVTYNSLM---SFETNYKEVSKIYDQMQRAGLQPDVVSYALL 277
+KA + MAE+GV S TYN+L+ + +I +QM+ G++P+VVSY L
Sbjct: 438 DKAEEWVKKMAEKGVTPSVETYNTLIDGYGKLCTFDRCFQILEQMEEIGVKPNVVSYGSL 497
Query: 278 INAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRC 337
IN K + EA V +M+ GV P + YN+L+D + G V A F M R
Sbjct: 498 INCLCKDGKILEAEIVLRDMICRGVLPNAQVYNMLIDGSCMVGKVKDALRFFDEMMRSEI 557
Query: 338 SPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMME 397
SP + +Y ++ + AE F ++ G P+VITY +LI GYA N+ K +
Sbjct: 558 SPTLVTYNVLIDGLCKKGKLTEAEDFLTQITSSGHSPDVITYNSLISGYANAGNVSKCLG 617
Query: 398 IYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILL 453
+Y+ M+ GIKP + ++ K + + Y EM PD+ N ++
Sbjct: 618 LYETMKNLGIKPTVRTYHPLISGCSK-EGIELVEKLYNEMLQMNLLPDRVVYNAMI 672
Score = 140 bits (352), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 88/359 (24%), Positives = 166/359 (46%), Gaps = 7/359 (1%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + F LI + + +KAE+ + M +KG PSV ++ L++ YG+ + I
Sbjct: 420 NSITFNSLIDKFCDMKEMDKAEEWVKKMAEKGVTPSVETYNTLIDGYGKLCTFDRCFQIL 479
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
+M+ G +P+ ++Y ++ + K EAE + L D + P+ ++++M+I
Sbjct: 480 EQMEEIGVKPNVVSYGSLINCLCKDGKILEAE---IVLRDMICRGVLPNAQVYNMLIDGS 536
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSL---MSFETNYKEVSKIYDQMQRAGLQPDV 271
G + A + F M + + VTYN L + + E Q+ +G PDV
Sbjct: 537 CMVGKVKDALRFFDEMMRSEISPTLVTYNVLIDGLCKKGKLTEAEDFLTQITSSGHSPDV 596
Query: 272 VSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKC 331
++Y LI+ Y A + L ++E M + G++PT + Y+ L+ + G ++ ++
Sbjct: 597 ITYNSLISGYANAGNVSKCLGLYETMKNLGIKPTVRTYHPLISGCSKEG-IELVEKLYNE 655
Query: 332 MRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNN 391
M + PD Y M+ Y + + A + + G P+ +TY +LI G+ +
Sbjct: 656 MLQMNLLPDRVVYNAMIHCYAEIGNTQKAYSLHQGMLDQGIHPDKMTYNSLILGHFREGK 715
Query: 392 LEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKN 450
L + ++ + M+ + P + ++ + KDF A VWY+EM F P+ N
Sbjct: 716 LSNIKDLVNNMKAKELAPKADTYDILVKGHCDLKDFSGAYVWYREMVENNFLPNASICN 774
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 83/340 (24%), Positives = 148/340 (43%), Gaps = 34/340 (10%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
LI YGK F++ ++L M + G P+VVS+ +L+ + G+ AE + R M G
Sbjct: 462 LIDGYGKLCTFDRCFQILEQMEEIGVKPNVVSYGSLINCLCKDGKILEAEIVLRDMICRG 521
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPL--------------------- 200
P+A Y +++ K K+A F ++ E SP
Sbjct: 522 VLPNAQVYNMLIDGSCMVGKVKDALRFFDEMMRSEISPTLVTYNVLIDGLCKKGKLTEAE 581
Query: 201 -----------KPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMS-- 247
PD ++ +I Y AG K L+ M G++ + TY+ L+S
Sbjct: 582 DFLTQITSSGHSPDVITYNSLISGYANAGNVSKCLGLYETMKNLGIKPTVRTYHPLISGC 641
Query: 248 FETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHK 307
+ + V K+Y++M + L PD V Y +I+ Y + ++A ++ + MLD G+ P
Sbjct: 642 SKEGIELVEKLYNEMLQMNLLPDRVVYNAMIHCYAEIGNTQKAYSLHQGMLDQGIHPDKM 701
Query: 308 AYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRL 367
YN L+ G + + + M+ +P +Y ++ + + D GA ++R +
Sbjct: 702 TYNSLILGHFREGKLSNIKDLVNNMKAKELAPKADTYDILVKGHCDLKDFSGAYVWYREM 761
Query: 368 KQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGI 407
++ F+PN L G + L+++ I +M V GI
Sbjct: 762 VENNFLPNASICNELTAGLEQEGRLQEVQVICSEMNVKGI 801
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 74/292 (25%), Positives = 135/292 (46%), Gaps = 6/292 (2%)
Query: 157 MQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKK 216
M+ G RP+ Y +++ + ++AE++F + + L ++ +I Y K
Sbjct: 202 MRKRGVRPNVFIYNVLIGGLCREKRIRDAEKMFDEMCNIN---LVGSIVTYNTLIDGYCK 258
Query: 217 AGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNY---KEVSKIYDQMQRAGLQPDVVS 273
G + A K+ M E+ V + +T+NSL+S KE + +M+ G PD +
Sbjct: 259 VGELDAAFKMRERMKEKSVAPNIITFNSLLSGLCKMRKMKEARSLLKEMEVNGFMPDGYT 318
Query: 274 YALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMR 333
Y++L + + A+ ++E+ + G+R + +ILL+ G V++A + K
Sbjct: 319 YSILFDGLLRCDDGNGAMELYEQATEKGIRINNYTGSILLNGLCKQGKVEKAEEILKKFT 378
Query: 334 RDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLE 393
+ D Y T ++ Y DM A R++ G PN IT+ +LI + + ++
Sbjct: 379 ENGLVADEVIYNTFVNGYCRIGDMNKAILTIERMESFGLRPNSITFNSLIDKFCDMKEMD 438
Query: 394 KMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPD 445
K E KM G+ P+ + T++D YGK FD ++ME G P+
Sbjct: 439 KAEEWVKKMAEKGVTPSVETYNTLIDGYGKLCTFDRCFQILEQMEEIGVKPN 490
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 87/387 (22%), Positives = 162/387 (41%), Gaps = 12/387 (3%)
Query: 101 MLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSS 160
+LI ++ AEK+ M S+V++ L++ Y + G A + RM+
Sbjct: 216 VLIGGLCREKRIRDAEKMFDEMCNINLVGSIVTYNTLIDGYCKVGELDAAFKMRERMKEK 275
Query: 161 GPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGY 220
P+ +T+ +L + K KEA + L + E + PD + ++ +
Sbjct: 276 SVAPNIITFNSLLSGLCKMRKMKEARSL---LKEMEVNGFMPDGYTYSILFDGLLRCDDG 332
Query: 221 EKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSK---IYDQMQRAGLQPDVVSYALL 277
A +L+ E+G++ + T + L++ +V K I + GL D V Y
Sbjct: 333 NGAMELYEQATEKGIRINNYTGSILLNGLCKQGKVEKAEEILKKFTENGLVADEVIYNTF 392
Query: 278 INAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRC 337
+N Y + +A+ E M G+RP +N L+D F +D+A K M
Sbjct: 393 VNGYCRIGDMNKAILTIERMESFGLRPNSITFNSLIDKFCDMKEMDKAEEWVKKMAEKGV 452
Query: 338 SPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMME 397
+P + +Y T++ Y + + ++++ G PNV++YG+LI K + +
Sbjct: 453 TPSVETYNTLIDGYGKLCTFDRCFQILEQMEEIGVKPNVVSYGSLINCLCKDGKILEAEI 512
Query: 398 IYDKMRVNGIKPNQTIFTTIMDA---YGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLS 454
+ M G+ PN ++ ++D GK KD A+ ++ EM P N+L+
Sbjct: 513 VLRDMICRGVLPNAQVYNMLIDGSCMVGKVKD---ALRFFDEMMRSEISPTLVTYNVLID 569
Query: 455 LAKTADERNEANELLGNFNHPNNEPGI 481
+ EA + L + P +
Sbjct: 570 GLCKKGKLTEAEDFLTQITSSGHSPDV 596
Score = 99.0 bits (245), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 88/407 (21%), Positives = 167/407 (41%), Gaps = 6/407 (1%)
Query: 86 LRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGG 145
L+I + NE + + + + F+ + S + + L+ +
Sbjct: 61 LQILLQQNCNEAAYSLAKSLILTKSTFSSPSDLFSCFSACSIPLRITLSDMLLSVCCKSK 120
Query: 146 RYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQK 205
+ A ++ M+ G PS ++ ++ V +F + ++FM + E S + D
Sbjct: 121 MLREAVELYEFMRRDGKLPSLVSLSLLFSCLVNEKQFVKVVDLFMEI---ENSGFRTDTF 177
Query: 206 MFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSL---MSFETNYKEVSKIYDQM 262
M+ I K + + M +RGV+ + YN L + E ++ K++D+M
Sbjct: 178 MYAKAIQAAVKLQNLKMGMEFLDSMRKRGVRPNVFIYNVLIGGLCREKRIRDAEKMFDEM 237
Query: 263 QRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMV 322
L +V+Y LI+ Y K + A + E M + V P +N LL +
Sbjct: 238 CNINLVGSIVTYNTLIDGYCKVGELDAAFKMRERMKEKSVAPNIITFNSLLSGLCKMRKM 297
Query: 323 DQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTL 382
+AR++ K M + PD +Y+ + + D GA + + + + G N T L
Sbjct: 298 KEARSLLKEMEVNGFMPDGYTYSILFDGLLRCDDGNGAMELYEQATEKGIRINNYTGSIL 357
Query: 383 IKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGF 442
+ G K +EK EI K NG+ ++ I+ T ++ Y + D + A++ + MES G
Sbjct: 358 LNGLCKQGKVEKAEEILKKFTENGLVADEVIYNTFVNGYCRIGDMNKAILTIERMESFGL 417
Query: 443 PPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGINGLSISVD 489
P+ N L+ E ++A E + P + + +D
Sbjct: 418 RPNSITFNSLIDKFCDMKEMDKAEEWVKKMAEKGVTPSVETYNTLID 464
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 57/284 (20%), Positives = 106/284 (37%), Gaps = 35/284 (12%)
Query: 220 YEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSKIYDQMQRAGLQPDVVSYALLIN 279
YE+ KL L+ + + + SL+ ++ + S ++ + + +L++
Sbjct: 55 YEQVNKLQILLQQNCNEAAYSLAKSLILTKSTFSSPSDLFSCFSACSIPLRITLSDMLLS 114
Query: 280 AYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSP 339
K++ EA+ ++E M G P+ + ++L + +F +
Sbjct: 115 VCCKSKMLREAVELYEFMRRDGKLPSLVSLSLLFSCLVNEKQFVKVVDLFMEIENSGFRT 174
Query: 340 DICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITY-------------------- 379
D Y + A V +++ +F +++ G PNV Y
Sbjct: 175 DTFMYAKAIQAAVKLQNLKMGMEFLDSMRKRGVRPNVFIYNVLIGGLCREKRIRDAEKMF 234
Query: 380 ---------------GTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKN 424
TLI GY KV L+ ++ ++M+ + PN F +++ K
Sbjct: 235 DEMCNINLVGSIVTYNTLIDGYCKVGELDAAFKMRERMKEKSVAPNIITFNSLLSGLCKM 294
Query: 425 KDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANEL 468
+ A KEME GF PD +IL D+ N A EL
Sbjct: 295 RKMKEARSLLKEMEVNGFMPDGYTYSILFDGLLRCDDGNGAMEL 338
>gi|297745184|emb|CBI39176.3| unnamed protein product [Vitis vinifera]
Length = 996
Score = 144 bits (364), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 92/346 (26%), Positives = 153/346 (44%), Gaps = 47/346 (13%)
Query: 119 LSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVE 178
L+ + K+ + V +T ++ ++ A RM+SS P+ +TY+I+L +
Sbjct: 287 LALIEKEEFKLDTVIYTQMISGLCEASLFEEAMDFLSRMRSSSCIPNVVTYRILLCGCLR 346
Query: 179 ANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQS 238
+ + + ++ E P +++F+ +I+ Y ++G Y A KL M + G Q
Sbjct: 347 KRQLGRCKRILSMMITE---GCYPSRRIFNSLIHAYCRSGDYSYAYKLLKKMGDCGCQPG 403
Query: 239 TVTYNSLMS----------------FETNYKEV--------------------------- 255
V YN L+ E Y E+
Sbjct: 404 YVVYNILIGGICGNEKLPSLDVLELAEKAYGEMLDAHVVLNKVNVSNLARCLCGAGKFEK 463
Query: 256 -SKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLD 314
I +M G PD +Y+ +I A + + A +FEEM V P Y IL+D
Sbjct: 464 AYSIIREMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFTYTILID 523
Query: 315 AFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVP 374
+F G++ QAR F M RD C+P++ +YT ++ AY+ A M A + F + +G +P
Sbjct: 524 SFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSANELFEMMLSEGCIP 583
Query: 375 NVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDA 420
NV+TY LI G+ K +EK +IY +MR N P+ ++ I D
Sbjct: 584 NVVTYTALIDGHCKSGQIEKACQIYARMRGNADIPDVDMYFKIDDG 629
Score = 142 bits (358), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 94/395 (23%), Positives = 175/395 (44%), Gaps = 22/395 (5%)
Query: 94 FNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAI 153
N+++ L G F KA ++ M KG+ P +++ ++ + NA +
Sbjct: 443 LNKVNVSNLARCLCGAGKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLL 502
Query: 154 FRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYM 213
F M+S+ P TY I++ F + ++A + F ++ + P+ + +I+
Sbjct: 503 FEEMKSNHVVPDVFTYTILIDSFCKVGLLQQARKWFDEMV---RDGCAPNVVTYTALIHA 559
Query: 214 YKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSK---IYDQMQRAGLQPD 270
Y KA A +LF +M G + VTY +L+ ++ K IY +M+ PD
Sbjct: 560 YLKARKMSSANELFEMMLSEGCIPNVVTYTALIDGHCKSGQIEKACQIYARMRGNADIPD 619
Query: 271 V----------------VSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLD 314
V +Y L++ KA + +EA + + M G P H Y+ L+D
Sbjct: 620 VDMYFKIDDGNIRDPNIFTYGALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVYDALID 679
Query: 315 AFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVP 374
F G +D+A+ VF M P++ +Y++++ ++ A K R+ ++ P
Sbjct: 680 GFCKVGKLDEAQMVFTKMSERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRMLENSCAP 739
Query: 375 NVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWY 434
NVI Y +I G KV ++ + M G PN +T ++D +GK D +
Sbjct: 740 NVIIYTEMIDGLCKVGKTDEAYRLMSMMEEKGCHPNVVTYTAMIDGFGKAGKVDKCLELM 799
Query: 435 KEMESCGFPPDQKAKNILLSLAKTADERNEANELL 469
++M + G P+ +L++ A ++A++LL
Sbjct: 800 RQMGAKGCAPNFVTYRVLINHCCAAGLLDDAHQLL 834
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 88/376 (23%), Positives = 174/376 (46%), Gaps = 28/376 (7%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + + +L+ ++ + +++LS M +G PS +L+ AY R G Y A +
Sbjct: 333 NVVTYRILLCGCLRKRQLGRCKRILSMMITEGCYPSRRIFNSLIHAYCRSGDYSYAYKLL 392
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKE------AEEVFMTLLDEEKSPLKPDQKMFH 208
++M G +P + Y I++ K AE+ + +LD K +
Sbjct: 393 KKMGDCGCQPGYVVYNILIGGICGNEKLPSLDVLELAEKAYGEMLDAHVVLNKVNVSNLA 452
Query: 209 MMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSK---IYDQMQRA 265
+ AG +EKA + M +G T TY+ ++ N +V ++++M+
Sbjct: 453 RCLC---GAGKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSN 509
Query: 266 GLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQA 325
+ PDV +Y +LI+++ K ++A F+EM+ G P Y L+ A+ + + A
Sbjct: 510 HVVPDVFTYTILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSA 569
Query: 326 RTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLK--------------QDG 371
+F+ M + C P++ +YT ++ + + +E A + + R++ DG
Sbjct: 570 NELFEMMLSEGCIPNVVTYTALIDGHCKSGQIEKACQIYARMRGNADIPDVDMYFKIDDG 629
Query: 372 FV--PNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDS 429
+ PN+ TYG L+ G K + +++ ++ D M V G +PN ++ ++D + K D
Sbjct: 630 NIRDPNIFTYGALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDE 689
Query: 430 AVVWYKEMESCGFPPD 445
A + + +M G+ P+
Sbjct: 690 AQMVFTKMSERGYGPN 705
Score = 119 bits (298), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 85/350 (24%), Positives = 159/350 (45%), Gaps = 28/350 (8%)
Query: 99 FLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQ 158
+ +LI ++ K G +A K M + G AP+VV++TAL+ AY + + +A +F M
Sbjct: 518 YTILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSANELFEMML 577
Query: 159 SSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSP-------------LKPDQK 205
S G P+ +TY ++ ++ + ++A +++ + P P+
Sbjct: 578 SEGCIPNVVTYTALIDGHCKSGQIEKACQIYARMRGNADIPDVDMYFKIDDGNIRDPNIF 637
Query: 206 MFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLM-SFETNYK--EVSKIYDQM 262
+ ++ KA ++AR L +M+ G + + + Y++L+ F K E ++ +M
Sbjct: 638 TYGALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFTKM 697
Query: 263 QRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMV 322
G P+V +Y+ LI+ K +R + AL V ML+ P Y ++D G
Sbjct: 698 SERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRMLENSCAPNVIIYTEMIDGLCKVGKT 757
Query: 323 DQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTL 382
D+A + M C P++ +YT M+ + A ++ + R++ G PN +TY L
Sbjct: 758 DEAYRLMSMMEEKGCHPNVVTYTAMIDGFGKAGKVDKCLELMRQMGAKGCAPNFVTYRVL 817
Query: 383 IKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAY-----GKNKDF 427
I L+ ++ D+M+ QT + M Y G N++F
Sbjct: 818 INHCCAAGLLDDAHQLLDEMK-------QTYWPKHMAGYRKVIEGFNREF 860
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 86/367 (23%), Positives = 176/367 (47%), Gaps = 28/367 (7%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + + LI AY K + A ++ M +G P+VV++TAL++ + + G+ + A I+
Sbjct: 549 NVVTYTALIHAYLKARKMSSANELFEMMLSEGCIPNVVTYTALIDGHCKSGQIEKACQIY 608
Query: 155 RRMQSSGP----------------RPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKS 198
RM+ + P+ TY ++ +A+K KEA ++ + E
Sbjct: 609 ARMRGNADIPDVDMYFKIDDGNIRDPNIFTYGALVDGLCKAHKVKEARDLLDVMSVE--- 665
Query: 199 PLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMS--FETNYKEVS 256
+P+ ++ +I + K G ++A+ +F M+ERG + TY+SL+ F+ +++
Sbjct: 666 GCEPNHIVYDALIDGFCKVGKLDEAQMVFTKMSERGYGPNVYTYSSLIDRLFKDKRLDLA 725
Query: 257 -KIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDA 315
K+ +M P+V+ Y +I+ K + +EA + M + G P Y ++D
Sbjct: 726 LKVLSRMLENSCAPNVIIYTEMIDGLCKVGKTDEAYRLMSMMEEKGCHPNVVTYTAMIDG 785
Query: 316 FAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPN 375
F +G VD+ + + M C+P+ +Y +++ A ++ A + +KQ + +
Sbjct: 786 FGKAGKVDKCLELMRQMGAKGCAPNFVTYRVLINHCCAAGLLDDAHQLLDEMKQTYWPKH 845
Query: 376 VITYGTLIKGYAK--VNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVW 433
+ Y +I+G+ + + +L + EI + + V P + ++D++ K + A+
Sbjct: 846 MAGYRKVIEGFNREFIISLGLLDEIAENVAV----PIIPAYRILIDSFCKAGRLELALEL 901
Query: 434 YKEMESC 440
+KEM SC
Sbjct: 902 HKEMSSC 908
Score = 105 bits (263), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 86/380 (22%), Positives = 157/380 (41%), Gaps = 19/380 (5%)
Query: 101 MLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSS 160
+LI + G +N A + L + GY PS +++ AL+ + R A + R M S
Sbjct: 202 VLIRKCCRNGLWNVALEELGRLKDLGYKPSRLTYNALVRVFLEADRLDTAYLVHREMSDS 261
Query: 161 GPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGY 220
G T + L +A +++EA + EK K D ++ MI +A +
Sbjct: 262 GFNMDGYTLGCFVHLLCKAGRWREALALI------EKEEFKLDTVIYTQMISGLCEASLF 315
Query: 221 EKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSK---IYDQMQRAGLQPDVVSYALL 277
E+A + M + VTY L+ +++ + I M G P + L
Sbjct: 316 EEAMDFLSRMRSSSCIPNVVTYRILLCGCLRKRQLGRCKRILSMMITEGCYPSRRIFNSL 375
Query: 278 INAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISG--------MVDQARTVF 329
I+AY ++ A + ++M D G +P + YNIL+ I G +++ A +
Sbjct: 376 IHAYCRSGDYSYAYKLLKKMGDCGCQPGYVVYNILIGG--ICGNEKLPSLDVLELAEKAY 433
Query: 330 KCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKV 389
M + + + + A E A R + GF+P+ TY +I
Sbjct: 434 GEMLDAHVVLNKVNVSNLARCLCGAGKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNA 493
Query: 390 NNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAK 449
+ ++ ++++M+ N + P+ +T ++D++ K A W+ EM G P+
Sbjct: 494 SKVDNAFLLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTY 553
Query: 450 NILLSLAKTADERNEANELL 469
L+ A + + ANEL
Sbjct: 554 TALIHAYLKARKMSSANELF 573
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 79/351 (22%), Positives = 165/351 (47%), Gaps = 18/351 (5%)
Query: 59 PKDLVLGTLVRLKQLKKWNVVSEVLEWLRIQSW--WDFNEMDFLMLITAYGKQGDFNKAE 116
P G LV L K + V E + L + S + N + + LI + K G ++A+
Sbjct: 634 PNIFTYGALV--DGLCKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQ 691
Query: 117 KVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLF 176
V + M+++GY P+V ++++L++ + R A + RM + P+ + Y ++
Sbjct: 692 MVFTKMSERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRMLENSCAPNVIIYTEMIDGL 751
Query: 177 VEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQ 236
+ K EA + M++++E+ P+ + MI + KAG +K +L M +G
Sbjct: 752 CKVGKTDEAYRL-MSMMEEKGC--HPNVVTYTAMIDGFGKAGKVDKCLELMRQMGAKGCA 808
Query: 237 QSTVTYNSLMSFETN---YKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAV 293
+ VTY L++ + ++ D+M++ + Y +I + R +L +
Sbjct: 809 PNFVTYRVLINHCCAAGLLDDAHQLLDEMKQTYWPKHMAGYRKVIEGFN--REFIISLGL 866
Query: 294 FEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFK----CMRRDRCSPDICSYTTMLS 349
+E+ + P AY IL+D+F +G ++ A + K C D+ Y++++
Sbjct: 867 LDEIAENVAVPIIPAYRILIDSFCKAGRLELALELHKEMSSCTSYSAADKDL--YSSLIE 924
Query: 350 AYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYD 400
+ AS ++ A + + + + G +P + + L+KG ++N E+ +++ D
Sbjct: 925 SLSLASKVDKAFELYADMIKRGGIPELSIFFYLVKGLIRINRWEEALQLSD 975
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 73/363 (20%), Positives = 140/363 (38%), Gaps = 50/363 (13%)
Query: 136 ALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDE 195
L+ R G + A R++ G +PS LTY ++++F+EA++ A V + D
Sbjct: 202 VLIRKCCRNGLWNVALEELGRLKDLGYKPSRLTYNALVRVFLEADRLDTAYLVHREMSD- 260
Query: 196 EKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSF---ETNY 252
S D +++ KAG + +A AL+ + + TV Y ++S + +
Sbjct: 261 --SGFNMDGYTLGCFVHLLCKAGRWREA---LALIEKEEFKLDTVIYTQMISGLCEASLF 315
Query: 253 KEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNIL 312
+E +M+ + P+VV+Y +L+ + R+ + M+ G P+ + +N
Sbjct: 316 EEAMDFLSRMRSSSCIPNVVTYRILLCGCLRKRQLGRCKRILSMMITEGCYPSRRIFN-- 373
Query: 313 LDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGF 372
+++ AY + D A K +++ G
Sbjct: 374 ---------------------------------SLIHAYCRSGDYSYAYKLLKKMGDCGC 400
Query: 373 VPNVITYGTLIKGYA------KVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKD 426
P + Y LI G ++ LE + Y +M + N+ + +
Sbjct: 401 QPGYVVYNILIGGICGNEKLPSLDVLELAEKAYGEMLDAHVVLNKVNVSNLARCLCGAGK 460
Query: 427 FDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGINGLSI 486
F+ A +EM S GF PD + ++ L A + + A L + P + +I
Sbjct: 461 FEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFTYTI 520
Query: 487 SVD 489
+D
Sbjct: 521 LID 523
>gi|225433790|ref|XP_002269080.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
mitochondrial-like [Vitis vinifera]
Length = 1045
Score = 144 bits (364), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 92/346 (26%), Positives = 153/346 (44%), Gaps = 47/346 (13%)
Query: 119 LSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVE 178
L+ + K+ + V +T ++ ++ A RM+SS P+ +TY+I+L +
Sbjct: 287 LALIEKEEFKLDTVIYTQMISGLCEASLFEEAMDFLSRMRSSSCIPNVVTYRILLCGCLR 346
Query: 179 ANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQS 238
+ + + ++ E P +++F+ +I+ Y ++G Y A KL M + G Q
Sbjct: 347 KRQLGRCKRILSMMITE---GCYPSRRIFNSLIHAYCRSGDYSYAYKLLKKMGDCGCQPG 403
Query: 239 TVTYNSLMS----------------FETNYKEV--------------------------- 255
V YN L+ E Y E+
Sbjct: 404 YVVYNILIGGICGNEKLPSLDVLELAEKAYGEMLDAHVVLNKVNVSNLARCLCGAGKFEK 463
Query: 256 -SKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLD 314
I +M G PD +Y+ +I A + + A +FEEM V P Y IL+D
Sbjct: 464 AYSIIREMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFTYTILID 523
Query: 315 AFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVP 374
+F G++ QAR F M RD C+P++ +YT ++ AY+ A M A + F + +G +P
Sbjct: 524 SFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSANELFEMMLSEGCIP 583
Query: 375 NVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDA 420
NV+TY LI G+ K +EK +IY +MR N P+ ++ I D
Sbjct: 584 NVVTYTALIDGHCKSGQIEKACQIYARMRGNADIPDVDMYFKIDDG 629
Score = 142 bits (358), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 94/395 (23%), Positives = 175/395 (44%), Gaps = 22/395 (5%)
Query: 94 FNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAI 153
N+++ L G F KA ++ M KG+ P +++ ++ + NA +
Sbjct: 443 LNKVNVSNLARCLCGAGKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLL 502
Query: 154 FRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYM 213
F M+S+ P TY I++ F + ++A + F ++ + P+ + +I+
Sbjct: 503 FEEMKSNHVVPDVFTYTILIDSFCKVGLLQQARKWFDEMV---RDGCAPNVVTYTALIHA 559
Query: 214 YKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSK---IYDQMQRAGLQPD 270
Y KA A +LF +M G + VTY +L+ ++ K IY +M+ PD
Sbjct: 560 YLKARKMSSANELFEMMLSEGCIPNVVTYTALIDGHCKSGQIEKACQIYARMRGNADIPD 619
Query: 271 V----------------VSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLD 314
V +Y L++ KA + +EA + + M G P H Y+ L+D
Sbjct: 620 VDMYFKIDDGNIRDPNIFTYGALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVYDALID 679
Query: 315 AFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVP 374
F G +D+A+ VF M P++ +Y++++ ++ A K R+ ++ P
Sbjct: 680 GFCKVGKLDEAQMVFTKMSERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRMLENSCAP 739
Query: 375 NVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWY 434
NVI Y +I G KV ++ + M G PN +T ++D +GK D +
Sbjct: 740 NVIIYTEMIDGLCKVGKTDEAYRLMSMMEEKGCHPNVVTYTAMIDGFGKAGKVDKCLELM 799
Query: 435 KEMESCGFPPDQKAKNILLSLAKTADERNEANELL 469
++M + G P+ +L++ A ++A++LL
Sbjct: 800 RQMGAKGCAPNFVTYRVLINHCCAAGLLDDAHQLL 834
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 88/376 (23%), Positives = 174/376 (46%), Gaps = 28/376 (7%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + + +L+ ++ + +++LS M +G PS +L+ AY R G Y A +
Sbjct: 333 NVVTYRILLCGCLRKRQLGRCKRILSMMITEGCYPSRRIFNSLIHAYCRSGDYSYAYKLL 392
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKE------AEEVFMTLLDEEKSPLKPDQKMFH 208
++M G +P + Y I++ K AE+ + +LD K +
Sbjct: 393 KKMGDCGCQPGYVVYNILIGGICGNEKLPSLDVLELAEKAYGEMLDAHVVLNKVNVSNLA 452
Query: 209 MMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSK---IYDQMQRA 265
+ AG +EKA + M +G T TY+ ++ N +V ++++M+
Sbjct: 453 RCLC---GAGKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSN 509
Query: 266 GLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQA 325
+ PDV +Y +LI+++ K ++A F+EM+ G P Y L+ A+ + + A
Sbjct: 510 HVVPDVFTYTILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSA 569
Query: 326 RTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLK--------------QDG 371
+F+ M + C P++ +YT ++ + + +E A + + R++ DG
Sbjct: 570 NELFEMMLSEGCIPNVVTYTALIDGHCKSGQIEKACQIYARMRGNADIPDVDMYFKIDDG 629
Query: 372 FV--PNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDS 429
+ PN+ TYG L+ G K + +++ ++ D M V G +PN ++ ++D + K D
Sbjct: 630 NIRDPNIFTYGALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDE 689
Query: 430 AVVWYKEMESCGFPPD 445
A + + +M G+ P+
Sbjct: 690 AQMVFTKMSERGYGPN 705
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 85/350 (24%), Positives = 159/350 (45%), Gaps = 28/350 (8%)
Query: 99 FLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQ 158
+ +LI ++ K G +A K M + G AP+VV++TAL+ AY + + +A +F M
Sbjct: 518 YTILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSANELFEMML 577
Query: 159 SSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSP-------------LKPDQK 205
S G P+ +TY ++ ++ + ++A +++ + P P+
Sbjct: 578 SEGCIPNVVTYTALIDGHCKSGQIEKACQIYARMRGNADIPDVDMYFKIDDGNIRDPNIF 637
Query: 206 MFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLM-SFETNYK--EVSKIYDQM 262
+ ++ KA ++AR L +M+ G + + + Y++L+ F K E ++ +M
Sbjct: 638 TYGALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFTKM 697
Query: 263 QRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMV 322
G P+V +Y+ LI+ K +R + AL V ML+ P Y ++D G
Sbjct: 698 SERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRMLENSCAPNVIIYTEMIDGLCKVGKT 757
Query: 323 DQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTL 382
D+A + M C P++ +YT M+ + A ++ + R++ G PN +TY L
Sbjct: 758 DEAYRLMSMMEEKGCHPNVVTYTAMIDGFGKAGKVDKCLELMRQMGAKGCAPNFVTYRVL 817
Query: 383 IKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAY-----GKNKDF 427
I L+ ++ D+M+ QT + M Y G N++F
Sbjct: 818 INHCCAAGLLDDAHQLLDEMK-------QTYWPKHMAGYRKVIEGFNREF 860
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 84/365 (23%), Positives = 174/365 (47%), Gaps = 24/365 (6%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + + LI AY K + A ++ M +G P+VV++TAL++ + + G+ + A I+
Sbjct: 549 NVVTYTALIHAYLKARKMSSANELFEMMLSEGCIPNVVTYTALIDGHCKSGQIEKACQIY 608
Query: 155 RRMQSSGP----------------RPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKS 198
RM+ + P+ TY ++ +A+K KEA ++ + E
Sbjct: 609 ARMRGNADIPDVDMYFKIDDGNIRDPNIFTYGALVDGLCKAHKVKEARDLLDVMSVE--- 665
Query: 199 PLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMS--FETNYKEVS 256
+P+ ++ +I + K G ++A+ +F M+ERG + TY+SL+ F+ +++
Sbjct: 666 GCEPNHIVYDALIDGFCKVGKLDEAQMVFTKMSERGYGPNVYTYSSLIDRLFKDKRLDLA 725
Query: 257 -KIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDA 315
K+ +M P+V+ Y +I+ K + +EA + M + G P Y ++D
Sbjct: 726 LKVLSRMLENSCAPNVIIYTEMIDGLCKVGKTDEAYRLMSMMEEKGCHPNVVTYTAMIDG 785
Query: 316 FAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPN 375
F +G VD+ + + M C+P+ +Y +++ A ++ A + +KQ + +
Sbjct: 786 FGKAGKVDKCLELMRQMGAKGCAPNFVTYRVLINHCCAAGLLDDAHQLLDEMKQTYWPKH 845
Query: 376 VITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYK 435
+ Y +I+G+ + + + + D++ N P + ++D++ K + A+ +K
Sbjct: 846 MAGYRKVIEGFNREFIIS--LGLLDEIAENVAVPIIPAYRILIDSFCKAGRLELALELHK 903
Query: 436 EMESC 440
EM SC
Sbjct: 904 EMSSC 908
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 86/380 (22%), Positives = 157/380 (41%), Gaps = 19/380 (5%)
Query: 101 MLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSS 160
+LI + G +N A + L + GY PS +++ AL+ + R A + R M S
Sbjct: 202 VLIRKCCRNGLWNVALEELGRLKDLGYKPSRLTYNALVRVFLEADRLDTAYLVHREMSDS 261
Query: 161 GPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGY 220
G T + L +A +++EA + EK K D ++ MI +A +
Sbjct: 262 GFNMDGYTLGCFVHLLCKAGRWREALALI------EKEEFKLDTVIYTQMISGLCEASLF 315
Query: 221 EKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSK---IYDQMQRAGLQPDVVSYALL 277
E+A + M + VTY L+ +++ + I M G P + L
Sbjct: 316 EEAMDFLSRMRSSSCIPNVVTYRILLCGCLRKRQLGRCKRILSMMITEGCYPSRRIFNSL 375
Query: 278 INAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISG--------MVDQARTVF 329
I+AY ++ A + ++M D G +P + YNIL+ I G +++ A +
Sbjct: 376 IHAYCRSGDYSYAYKLLKKMGDCGCQPGYVVYNILIGG--ICGNEKLPSLDVLELAEKAY 433
Query: 330 KCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKV 389
M + + + + A E A R + GF+P+ TY +I
Sbjct: 434 GEMLDAHVVLNKVNVSNLARCLCGAGKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNA 493
Query: 390 NNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAK 449
+ ++ ++++M+ N + P+ +T ++D++ K A W+ EM G P+
Sbjct: 494 SKVDNAFLLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTY 553
Query: 450 NILLSLAKTADERNEANELL 469
L+ A + + ANEL
Sbjct: 554 TALIHAYLKARKMSSANELF 573
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 79/351 (22%), Positives = 165/351 (47%), Gaps = 18/351 (5%)
Query: 59 PKDLVLGTLVRLKQLKKWNVVSEVLEWLRIQSW--WDFNEMDFLMLITAYGKQGDFNKAE 116
P G LV L K + V E + L + S + N + + LI + K G ++A+
Sbjct: 634 PNIFTYGALV--DGLCKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQ 691
Query: 117 KVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLF 176
V + M+++GY P+V ++++L++ + R A + RM + P+ + Y ++
Sbjct: 692 MVFTKMSERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRMLENSCAPNVIIYTEMIDGL 751
Query: 177 VEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQ 236
+ K EA + M++++E+ P+ + MI + KAG +K +L M +G
Sbjct: 752 CKVGKTDEAYRL-MSMMEEKGC--HPNVVTYTAMIDGFGKAGKVDKCLELMRQMGAKGCA 808
Query: 237 QSTVTYNSLMSFETN---YKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAV 293
+ VTY L++ + ++ D+M++ + Y +I + R +L +
Sbjct: 809 PNFVTYRVLINHCCAAGLLDDAHQLLDEMKQTYWPKHMAGYRKVIEGFN--REFIISLGL 866
Query: 294 FEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFK----CMRRDRCSPDICSYTTMLS 349
+E+ + P AY IL+D+F +G ++ A + K C D+ Y++++
Sbjct: 867 LDEIAENVAVPIIPAYRILIDSFCKAGRLELALELHKEMSSCTSYSAADKDL--YSSLIE 924
Query: 350 AYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYD 400
+ AS ++ A + + + + G +P + + L+KG ++N E+ +++ D
Sbjct: 925 SLSLASKVDKAFELYADMIKRGGIPELSIFFYLVKGLIRINRWEEALQLSD 975
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 73/363 (20%), Positives = 140/363 (38%), Gaps = 50/363 (13%)
Query: 136 ALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDE 195
L+ R G + A R++ G +PS LTY ++++F+EA++ A V + D
Sbjct: 202 VLIRKCCRNGLWNVALEELGRLKDLGYKPSRLTYNALVRVFLEADRLDTAYLVHREMSD- 260
Query: 196 EKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSF---ETNY 252
S D +++ KAG + +A AL+ + + TV Y ++S + +
Sbjct: 261 --SGFNMDGYTLGCFVHLLCKAGRWREA---LALIEKEEFKLDTVIYTQMISGLCEASLF 315
Query: 253 KEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNIL 312
+E +M+ + P+VV+Y +L+ + R+ + M+ G P+ + +N
Sbjct: 316 EEAMDFLSRMRSSSCIPNVVTYRILLCGCLRKRQLGRCKRILSMMITEGCYPSRRIFN-- 373
Query: 313 LDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGF 372
+++ AY + D A K +++ G
Sbjct: 374 ---------------------------------SLIHAYCRSGDYSYAYKLLKKMGDCGC 400
Query: 373 VPNVITYGTLIKGYA------KVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKD 426
P + Y LI G ++ LE + Y +M + N+ + +
Sbjct: 401 QPGYVVYNILIGGICGNEKLPSLDVLELAEKAYGEMLDAHVVLNKVNVSNLARCLCGAGK 460
Query: 427 FDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGINGLSI 486
F+ A +EM S GF PD + ++ L A + + A L + P + +I
Sbjct: 461 FEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFTYTI 520
Query: 487 SVD 489
+D
Sbjct: 521 LID 523
>gi|297806115|ref|XP_002870941.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297316778|gb|EFH47200.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 719
Score = 144 bits (364), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 106/421 (25%), Positives = 188/421 (44%), Gaps = 12/421 (2%)
Query: 37 QIEEVGSAVAVLRSERTRGQPLPKDLVLGTLVRLKQLK-KWNVVSEVLEWLRIQSWWDFN 95
++ E A +LRS+ + ++G+LVR+ ++ W + E+ +S N
Sbjct: 170 KLREAYEAFTLLRSKGYTVSIDACNALIGSLVRIGWVELAWRIYQEI-----SRSGVGVN 224
Query: 96 EMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFR 155
+++ A K G K LS + +KG P +V++ L+ AY G + A +
Sbjct: 225 VYTLNIMVNALCKDGKMEKVGTFLSEVQEKGVYPDIVTYNTLISAYSSQGLMEEAFELMH 284
Query: 156 RMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYK 215
M S G P TY ++ + K++ A+EVF +L +S L PD + ++
Sbjct: 285 AMPSKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEML---RSGLSPDSTTYRSLLMEAC 341
Query: 216 KAGGYEKARKLFALMAERGVQQSTVTYNSLMSFET---NYKEVSKIYDQMQRAGLQPDVV 272
K G + +F+ M R V V ++S+MS T N + ++ ++ AGL PD V
Sbjct: 342 KKGDAVETENIFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNV 401
Query: 273 SYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCM 332
Y +LI Y + EA+ + EML G YN +L M+ +A +F M
Sbjct: 402 IYTILIQGYCRKGMISEAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEM 461
Query: 333 RRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNL 392
PD + T ++ + +++ A + F+++K+ +V+TY TL+ G+ KV ++
Sbjct: 462 TERGLFPDSYTLTILIDGHCKLGNLQNAMELFKKMKEKRIKLDVVTYNTLLDGFGKVGDI 521
Query: 393 EKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNIL 452
+ EI+ M I P F+ +++A A + EM S P N +
Sbjct: 522 DTAKEIWADMVSKEILPTPISFSILVNALCSKGHLSEAFRVWDEMISKSIKPTVMICNSM 581
Query: 453 L 453
+
Sbjct: 582 I 582
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 91/355 (25%), Positives = 170/355 (47%), Gaps = 6/355 (1%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
LI+AY QG +A +++ M KG++P V ++ ++ + G+Y+ A+ +F M SG
Sbjct: 266 LISAYSSQGLMEEAFELMHAMPSKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSG 325
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
P + TY+ L +EA K +A E D + PD F M+ ++ ++G +
Sbjct: 326 LSPDSTTYR---SLLMEACKKGDAVETENIFSDMRSRDVVPDLVCFSSMMSLFTRSGNLD 382
Query: 222 KARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSK---IYDQMQRAGLQPDVVSYALLI 278
KA F + E G+ V Y L+ +S+ + ++M + G DVV+Y ++
Sbjct: 383 KALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISEAMNLRNEMLQQGCAMDVVTYNTIL 442
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCS 338
+ K + EA +F EM + G+ P IL+D G + A +FK M+ R
Sbjct: 443 HGLCKRKMLGEADKLFNEMTERGLFPDSYTLTILIDGHCKLGNLQNAMELFKKMKEKRIK 502
Query: 339 PDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEI 398
D+ +Y T+L + D++ A++ + + +P I++ L+ +L + +
Sbjct: 503 LDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISFSILVNALCSKGHLSEAFRV 562
Query: 399 YDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILL 453
+D+M IKP I +++ Y ++ + ++ ++M S GF PD + N L+
Sbjct: 563 WDEMISKSIKPTVMICNSMIKGYCRSGNASDGEIFLEKMISEGFVPDCISYNTLI 617
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 87/354 (24%), Positives = 168/354 (47%), Gaps = 8/354 (2%)
Query: 99 FLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQ 158
F +++ + + G+ +KA + + + G P V +T L++ Y R G A + M
Sbjct: 368 FSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISEAMNLRNEML 427
Query: 159 SSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAG 218
G +TY IL + EA+++F + + L PD ++I + K G
Sbjct: 428 QQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTER---GLFPDSYTLTILIDGHCKLG 484
Query: 219 GYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEV---SKIYDQMQRAGLQPDVVSYA 275
+ A +LF M E+ ++ VTYN+L+ ++ +I+ M + P +S++
Sbjct: 485 NLQNAMELFKKMKEKRIKLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISFS 544
Query: 276 LLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRD 335
+L+NA EA V++EM+ ++PT N ++ + SG + M +
Sbjct: 545 ILVNALCSKGHLSEAFRVWDEMISKSIKPTVMICNSMIKGYCRSGNASDGEIFLEKMISE 604
Query: 336 RCSPDICSYTTMLSAYVNASDMEGAEKFFRRL--KQDGFVPNVITYGTLIKGYAKVNNLE 393
PD SY T++ +V +M A +++ KQ G VP+V TY +++ G+ + N ++
Sbjct: 605 GFVPDCISYNTLIYGFVKEENMSKAFGLVKKMEEKQGGLVPDVFTYNSILHGFCRENQMK 664
Query: 394 KMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQK 447
+ + KM G+ P+++ +T++++ + + A ++ EM GF PD K
Sbjct: 665 EAEAVLRKMIERGVNPDRSTYTSLINGFVSQDNLTEAFRFHDEMLQRGFSPDDK 718
Score = 115 bits (288), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 88/383 (22%), Positives = 160/383 (41%), Gaps = 52/383 (13%)
Query: 123 NKKGYAPSVVSHTALMEAYGRGGRYKNAEA-IFRRMQSSGPRPSALT------------- 168
N + + +S +A++ R GR +A++ + R ++ SG +
Sbjct: 95 NFPNFKHTSLSLSAMIHILVRSGRLSDAQSCVLRMIRRSGVSRVEIVNSLVSTYSNCGSN 154
Query: 169 ---YQIILKLFVEANKFKEAEEVFMTLLDE------------------------------ 195
+ ++++ FV+A K +EA E F L +
Sbjct: 155 DSVFDLLIRTFVQARKLREAYEAFTLLRSKGYTVSIDACNALIGSLVRIGWVELAWRIYQ 214
Query: 196 --EKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETN-- 251
+S + + ++M+ K G EK + + E+GV VTYN+L+S ++
Sbjct: 215 EISRSGVGVNVYTLNIMVNALCKDGKMEKVGTFLSEVQEKGVYPDIVTYNTLISAYSSQG 274
Query: 252 -YKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYN 310
+E ++ M G P V +Y +IN K + E A VF EML +G+ P Y
Sbjct: 275 LMEEAFELMHAMPSKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYR 334
Query: 311 ILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQD 370
LL G + +F MR PD+ +++M+S + + +++ A +F +K+
Sbjct: 335 SLLMEACKKGDAVETENIFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEA 394
Query: 371 GFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSA 430
G +P+ + Y LI+GY + + + M + ++M G + + TI+ K K A
Sbjct: 395 GLIPDNVIYTILIQGYCRKGMISEAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEA 454
Query: 431 VVWYKEMESCGFPPDQKAKNILL 453
+ EM G PD IL+
Sbjct: 455 DKLFNEMTERGLFPDSYTLTILI 477
Score = 68.6 bits (166), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 87/177 (49%), Gaps = 4/177 (2%)
Query: 97 MDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRR 156
+ F +L+ A +G ++A +V M K P+V+ ++++ Y R G + E +
Sbjct: 541 ISFSILVNALCSKGHLSEAFRVWDEMISKSIKPTVMICNSMIKGYCRSGNASDGEIFLEK 600
Query: 157 MQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKK 216
M S G P ++Y ++ FV+ +A + + ++E++ L PD ++ +++ + +
Sbjct: 601 MISEGFVPDCISYNTLIYGFVKEENMSKAFGL-VKKMEEKQGGLVPDVFTYNSILHGFCR 659
Query: 217 AGGYEKARKLFALMAERGVQQSTVTYNSLMS---FETNYKEVSKIYDQMQRAGLQPD 270
++A + M ERGV TY SL++ + N E + +D+M + G PD
Sbjct: 660 ENQMKEAEAVLRKMIERGVNPDRSTYTSLINGFVSQDNLTEAFRFHDEMLQRGFSPD 716
Score = 43.1 bits (100), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 33/156 (21%), Positives = 62/156 (39%), Gaps = 7/156 (4%)
Query: 337 CSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMM 396
C + + ++ +V A + A + F L+ G+ ++ LI ++ +E
Sbjct: 151 CGSNDSVFDLLIRTFVQARKLREAYEAFTLLRSKGYTVSIDACNALIGSLVRIGWVELAW 210
Query: 397 EIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLA 456
IY ++ +G+ N +++A K+ + + E++ G PD N L+S
Sbjct: 211 RIYQEISRSGVGVNVYTLNIMVNALCKDGKMEKVGTFLSEVQEKGVYPDIVTYNTLISAY 270
Query: 457 KTADERNEANELLGNFNHPNNEPG-------INGLS 485
+ EA EL+ PG INGL
Sbjct: 271 SSQGLMEEAFELMHAMPSKGFSPGVYTYNTVINGLC 306
>gi|242046334|ref|XP_002461038.1| hypothetical protein SORBIDRAFT_02g039560 [Sorghum bicolor]
gi|241924415|gb|EER97559.1| hypothetical protein SORBIDRAFT_02g039560 [Sorghum bicolor]
Length = 595
Score = 144 bits (364), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 117/455 (25%), Positives = 206/455 (45%), Gaps = 43/455 (9%)
Query: 42 GSAVAVLRSERTRGQPLPKDLVL-GTLVR-LKQLKKWNVVSEVLE--------------- 84
G AVA+LRS + G + D+V GTL+R L + + E+L+
Sbjct: 140 GEAVALLRSMQASG--VRADVVTYGTLIRGLCDASELDAALELLDEMCGSGVQPNVVVYS 197
Query: 85 -----WLRIQSWWD----FNEMD----------FLMLITAYGKQGDFNKAEKVLSFMNKK 125
+ R W D F +M F LI K+G KA KV M ++
Sbjct: 198 CLLRGYCRSGRWQDVGKVFEDMSRRGIKPDVIMFTGLIDDLCKEGKTGKAAKVKDMMVQR 257
Query: 126 GYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEA 185
G P+VV++ L+ + + G + A + + M G P +TY ++ + EA
Sbjct: 258 GLEPNVVTYNVLINSLCKEGSVREALTLRKEMDDKGVAPDVVTYNTLIAGLSGVLEMDEA 317
Query: 186 EEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSL 245
F+ + + + ++PD F+ +I+ K G +A K+ +MAERG + VTYN L
Sbjct: 318 MS-FLEEMIQGDTVVEPDVVTFNSVIHGLCKIGRMTQAVKVREMMAERGCMCNLVTYNYL 376
Query: 246 MSFETNYKEVS---KIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGV 302
+ +V + D++ +GL+PD +Y++LIN + K + A M G+
Sbjct: 377 IGGFLRVHKVKMAMNLMDELAISGLEPDSFTYSILINGFSKMWEVDRAEKFLCTMRQRGI 436
Query: 303 RPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEK 362
+ Y LL A GM+++A +F M ++ C D +Y+TM+ + DM+ ++
Sbjct: 437 KAELFHYIPLLAAMCQQGMMERAMGLFNEMDKN-CGLDAIAYSTMIHGACKSGDMKTVKQ 495
Query: 363 FFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYG 422
+ + +G P+ +TY LI YAK+ +LE+ + +M +G P+ +F +++ Y
Sbjct: 496 LIQDMLDEGLAPDAVTYSMLINMYAKLGDLEEAERVLKQMTASGFVPDVAVFDSLIKGYS 555
Query: 423 KNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAK 457
D + EM + D K + ++ L +
Sbjct: 556 AEGQTDKVLKLIHEMRAKNVAFDPKIISTIIRLPQ 590
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 96/397 (24%), Positives = 196/397 (49%), Gaps = 18/397 (4%)
Query: 102 LITAYGKQG--DFNKAEKVLSFMNKKGYA---PSVVSHTALMEAYGRGGRYKNAEAIFRR 156
++ A ++G +A +L M+++ + P+ VS+T +M R A A+ R
Sbjct: 89 VLAALCRRGGDHLRQARSLLVDMSREAHPAARPNAVSYTTVMRGLCASRRTGEAVALLRS 148
Query: 157 MQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEE-KSPLKPDQKMFHMMIYMYK 215
MQ+SG R +TY +++ +A++ A E LLDE S ++P+ ++ ++ Y
Sbjct: 149 MQASGVRADVVTYGTLIRGLCDASELDAALE----LLDEMCGSGVQPNVVVYSCLLRGYC 204
Query: 216 KAGGYEKARKLFALMAERGVQQSTVTYNSL---MSFETNYKEVSKIYDQMQRAGLQPDVV 272
++G ++ K+F M+ RG++ + + L + E + +K+ D M + GL+P+VV
Sbjct: 205 RSGRWQDVGKVFEDMSRRGIKPDVIMFTGLIDDLCKEGKTGKAAKVKDMMVQRGLEPNVV 264
Query: 273 SYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCM 332
+Y +LIN+ K EAL + +EM D GV P YN L+ + +D+A + + M
Sbjct: 265 TYNVLINSLCKEGSVREALTLRKEMDDKGVAPDVVTYNTLIAGLSGVLEMDEAMSFLEEM 324
Query: 333 RR--DRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVN 390
+ PD+ ++ +++ M A K + + G + N++TY LI G+ +V+
Sbjct: 325 IQGDTVVEPDVVTFNSVIHGLCKIGRMTQAVKVREMMAERGCMCNLVTYNYLIGGFLRVH 384
Query: 391 NLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKN 450
++ M + D++ ++G++P+ ++ +++ + K + D A + M G +
Sbjct: 385 KVKMAMNLMDELAISGLEPDSFTYSILINGFSKMWEVDRAEKFLCTMRQRGIKAELFHYI 444
Query: 451 ILLSLAKTADERNEANELLGNFNHPNNEPGINGLSIS 487
LL+ ++ +G FN + G++ ++ S
Sbjct: 445 PLLA---AMCQQGMMERAMGLFNEMDKNCGLDAIAYS 478
>gi|414586743|tpg|DAA37314.1| TPA: hypothetical protein ZEAMMB73_981845 [Zea mays]
Length = 524
Score = 144 bits (364), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 90/329 (27%), Positives = 159/329 (48%), Gaps = 6/329 (1%)
Query: 129 PSVVSHTALMEAYGRGGRYKNAEAIFRRM-QSSGPRPSALTYQIILKLFVEANKFKEAEE 187
P+ V++ ++ + GR + A + R M + G P TY ++ + + + ++A +
Sbjct: 145 PNAVTYNTVIAGFCARGRVQAALEVMREMRERGGIAPDKYTYATLISGWCKIGRMEDAVK 204
Query: 188 VFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMS 247
VF +L K + P M++ +I Y G + A + M +RG+ + TYN LM
Sbjct: 205 VFDEML--TKGEVAPSAVMYNALIGGYCDVGKLDVALQYREDMVQRGIAMTVATYNLLMH 262
Query: 248 ---FETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRP 304
+ + + ++MQ+ G PDV +Y +LIN Y K E++AL VFEEM GVR
Sbjct: 263 ALFMDARASDAYAVLEEMQKNGFSPDVFTYNILINGYCKEGNEKKALEVFEEMSQKGVRA 322
Query: 305 THKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFF 364
T Y L+ F+ G V + +F + PD+ Y +++++ DME A +
Sbjct: 323 TAVTYTSLIYVFSRKGQVQETDRLFNVAVKKGIRPDVVMYNALINSHCTGGDMERAYEIM 382
Query: 365 RRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKN 424
+++ P+ +TY TL++G+ + L++ + D+M GI+P+ + T++ Y
Sbjct: 383 AEMEKKRIPPDDMTYNTLMRGFCLLGRLDEARTLIDEMTKRGIQPDLVSYNTLISGYSMK 442
Query: 425 KDFDSAVVWYKEMESCGFPPDQKAKNILL 453
D A+ EM GF P N L+
Sbjct: 443 GDIKDALRVRDEMMDKGFNPTLMTYNALI 471
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 84/362 (23%), Positives = 152/362 (41%), Gaps = 44/362 (12%)
Query: 145 GRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQ 204
G+ A + R+M PRP+A+TY ++ F + + A EV + E+ + PD+
Sbjct: 130 GKPVRALELLRQM----PRPNAVTYNTVIAGFCARGRVQAALEVMREM--RERGGIAPDK 183
Query: 205 KMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSKIYDQMQR 264
+ +I + K G E A K+F M +G EV+
Sbjct: 184 YTYATLISGWCKIGRMEDAVKVFDEMLTKG-------------------EVA-------- 216
Query: 265 AGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQ 324
P V Y LI Y + + AL E+M+ G+ T YN+L+ A +
Sbjct: 217 ----PSAVMYNALIGGYCDVGKLDVALQYREDMVQRGIAMTVATYNLLMHALFMDARASD 272
Query: 325 ARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIK 384
A V + M+++ SPD+ +Y +++ Y + + A + F + Q G +TY +LI
Sbjct: 273 AYAVLEEMQKNGFSPDVFTYNILINGYCKEGNEKKALEVFEEMSQKGVRATAVTYTSLIY 332
Query: 385 GYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPP 444
+++ +++ +++ GI+P+ ++ +++++ D + A EME PP
Sbjct: 333 VFSRKGQVQETDRLFNVAVKKGIRPDVVMYNALINSHCTGGDMERAYEIMAEMEKKRIPP 392
Query: 445 DQKAKNILLSLAKTADERNEANELLGNFNHPNNEPG-------INGLSISVDEEDDDDDD 497
D N L+ +EA L+ +P I+G S+ D +D
Sbjct: 393 DDMTYNTLMRGFCLLGRLDEARTLIDEMTKRGIQPDLVSYNTLISGYSMKGDIKDALRVR 452
Query: 498 DE 499
DE
Sbjct: 453 DE 454
>gi|224136033|ref|XP_002327364.1| predicted protein [Populus trichocarpa]
gi|222835734|gb|EEE74169.1| predicted protein [Populus trichocarpa]
Length = 662
Score = 144 bits (364), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 92/364 (25%), Positives = 171/364 (46%), Gaps = 9/364 (2%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
+E + ++I GK G +++ ++ M KGY+P+V+++ +++A A +F
Sbjct: 280 DEYTYTIMIRMTGKIGKPDESLELFEEMLNKGYSPNVIAYNTMIQALANARMVDKAILLF 339
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
+M RPS TY +IL L K + +EV E S + ++ ++
Sbjct: 340 LKMVEKECRPSEFTYSVILHLLATERKLHKLDEVV------EVSKKYMSRSIYAYLVRTL 393
Query: 215 KKAGGYEKARKLFALM---AERGVQQSTVTYNSLMSFETNYKEVSKIYDQMQRAGLQPDV 271
KK G +A +LF M ERG + + V+ + E + ++ G+ D
Sbjct: 394 KKLGHASEAHRLFCNMWNCHERGDRDACVSMLECLCSAGKTTEAIDLLGKIHEKGVSVDT 453
Query: 272 VSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKC 331
V Y + +A GK ++ ++E+M G P YNIL+ +F +G VD+A +F+
Sbjct: 454 VMYNTVFSALGKLKQISPLHDLYEKMKQDGPLPDTFTYNILISSFGRAGKVDEAIKIFEE 513
Query: 332 MRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNN 391
+ PD CSY ++++ ++ A F+ + + G P+V+TY TLI+ + K +
Sbjct: 514 LEDSDYKPDTCSYNSLINCLGKNGHLDEAHMKFKEMCEKGLNPDVVTYSTLIECFGKTDK 573
Query: 392 LEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNI 451
+E ++D+M G PN + ++D ++ AV Y +++ G PD ++
Sbjct: 574 VEMACRLFDEMLAEGCYPNIVTYNILLDCLERSGRTAEAVDLYAKLKQQGLIPDSITYSV 633
Query: 452 LLSL 455
L L
Sbjct: 634 LARL 637
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 87/379 (22%), Positives = 168/379 (44%), Gaps = 7/379 (1%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
L+ AY + + K V M KKG+ + + L++A + +A +F M+
Sbjct: 217 LVQAYLRSRNTEKGFAVYLEMKKKGHMLDIFAFNMLLDALVKDSEVDHAYKVFEDMKRKH 276
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
P TY I++++ + K E+ E+F +L++ SP + ++ MI A +
Sbjct: 277 CEPDEYTYTIMIRMTGKIGKPDESLELFEEMLNKGYSP---NVIAYNTMIQALANARMVD 333
Query: 222 KARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSKIYDQMQRAGLQPDVVSYALLINAY 281
KA LF M E+ + S TY+ ++ +++ K+ + ++ + YA L+
Sbjct: 334 KAILLFLKMVEKECRPSEFTYSVILHLLATERKLHKLDEVVEVSKKYMSRSIYAYLVRTL 393
Query: 282 GKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDI 341
K EA +F M + R A +L+ +G +A + + S D
Sbjct: 394 KKLGHASEAHRLFCNMWNCHERGDRDACVSMLECLCSAGKTTEAIDLLGKIHEKGVSVDT 453
Query: 342 CSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDK 401
Y T+ SA + + ++KQDG +P+ TY LI + + +++ ++I+++
Sbjct: 454 VMYNTVFSALGKLKQISPLHDLYEKMKQDGPLPDTFTYNILISSFGRAGKVDEAIKIFEE 513
Query: 402 MRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADE 461
+ + KP+ + ++++ GKN D A + +KEM G PD + L+ D+
Sbjct: 514 LEDSDYKPDTCSYNSLINCLGKNGHLDEAHMKFKEMCEKGLNPDVVTYSTLIECFGKTDK 573
Query: 462 RNEA----NELLGNFNHPN 476
A +E+L +PN
Sbjct: 574 VEMACRLFDEMLAEGCYPN 592
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 59/199 (29%), Positives = 101/199 (50%)
Query: 220 YEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSKIYDQMQRAGLQPDVVSYALLIN 279
+ AR + + M GV+ S T N L+ F N +++ K +++ GL+ +Y L+
Sbjct: 160 FHLARSIVSEMERNGVRGSISTVNILIGFYENSEDLQKCIGLIKKWGLRMTGYTYKCLVQ 219
Query: 280 AYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSP 339
AY ++R E+ AV+ EM G A+N+LLDA VD A VF+ M+R C P
Sbjct: 220 AYLRSRNTEKGFAVYLEMKKKGHMLDIFAFNMLLDALVKDSEVDHAYKVFEDMKRKHCEP 279
Query: 340 DICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIY 399
D +YT M+ + + + F + G+ PNVI Y T+I+ A ++K + ++
Sbjct: 280 DEYTYTIMIRMTGKIGKPDESLELFEEMLNKGYSPNVIAYNTMIQALANARMVDKAILLF 339
Query: 400 DKMRVNGIKPNQTIFTTIM 418
KM +P++ ++ I+
Sbjct: 340 LKMVEKECRPSEFTYSVIL 358
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 82/369 (22%), Positives = 155/369 (42%), Gaps = 41/369 (11%)
Query: 146 RYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQK 205
R+ A +I M+ +G R S T I++ + + ++ + +K L+
Sbjct: 159 RFHLARSIVSEMERNGVRGSISTVNILIGFYENSEDLQKCIGLI------KKWGLRMTGY 212
Query: 206 MFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVS---KIYDQM 262
+ ++ Y ++ EK ++ M ++G +N L+ EV K+++ M
Sbjct: 213 TYKCLVQAYLRSRNTEKGFAVYLEMKKKGHMLDIFAFNMLLDALVKDSEVDHAYKVFEDM 272
Query: 263 QRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMV 322
+R +PD +Y ++I GK + +E+L +FEEML+ G P AYN ++ A A + MV
Sbjct: 273 KRKHCEPDEYTYTIMIRMTGKIGKPDESLELFEEMLNKGYSPNVIAYNTMIQALANARMV 332
Query: 323 DQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDM-------EGAEKFFRRLKQDGFVPN 375
D+A +F M C P +Y+ +L + E ++K+ R V
Sbjct: 333 DKAILLFLKMVEKECRPSEFTYSVILHLLATERKLHKLDEVVEVSKKYMSRSIYAYLVRT 392
Query: 376 VITYGTLIKGY----------------AKVNNLEKM---------MEIYDKMRVNGIKPN 410
+ G + + A V+ LE + +++ K+ G+ +
Sbjct: 393 LKKLGHASEAHRLFCNMWNCHERGDRDACVSMLECLCSAGKTTEAIDLLGKIHEKGVSVD 452
Query: 411 QTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLG 470
++ T+ A GK K Y++M+ G PD NIL+S A + +EA ++
Sbjct: 453 TVMYNTVFSALGKLKQISPLHDLYEKMKQDGPLPDTFTYNILISSFGRAGKVDEAIKIFE 512
Query: 471 NFNHPNNEP 479
+ +P
Sbjct: 513 ELEDSDYKP 521
Score = 65.5 bits (158), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 45/189 (23%), Positives = 85/189 (44%), Gaps = 6/189 (3%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
+ +A GK + + M + G P ++ L+ ++GR G+ A IF ++ S
Sbjct: 459 VFSALGKLKQISPLHDLYEKMKQDGPLPDTFTYNILISSFGRAGKVDEAIKIFEELEDSD 518
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
+P +Y ++ + EA F + ++ L PD + +I + K E
Sbjct: 519 YKPDTCSYNSLINCLGKNGHLDEAHMKFKEMCEKG---LNPDVVTYSTLIECFGKTDKVE 575
Query: 222 KARKLFALMAERGVQQSTVTYNSLM-SFETNYK--EVSKIYDQMQRAGLQPDVVSYALLI 278
A +LF M G + VTYN L+ E + + E +Y ++++ GL PD ++Y++L
Sbjct: 576 MACRLFDEMLAEGCYPNIVTYNILLDCLERSGRTAEAVDLYAKLKQQGLIPDSITYSVLA 635
Query: 279 NAYGKARRE 287
+ R+
Sbjct: 636 RLQSGSHRK 644
Score = 47.0 bits (110), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 34/159 (21%), Positives = 71/159 (44%), Gaps = 7/159 (4%)
Query: 325 ARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRR--LKQDGFVPNVITYGTL 382
AR++ M R+ I + ++ Y N+ D++ ++ L+ G+ TY L
Sbjct: 163 ARSIVSEMERNGVRGSISTVNILIGFYENSEDLQKCIGLIKKWGLRMTGY-----TYKCL 217
Query: 383 IKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGF 442
++ Y + N EK +Y +M+ G + F ++DA K+ + D A +++M+
Sbjct: 218 VQAYLRSRNTEKGFAVYLEMKKKGHMLDIFAFNMLLDALVKDSEVDHAYKVFEDMKRKHC 277
Query: 443 PPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGI 481
PD+ I++ + + +E+ EL + P +
Sbjct: 278 EPDEYTYTIMIRMTGKIGKPDESLELFEEMLNKGYSPNV 316
>gi|410110061|gb|AFV61110.1| pentatricopeptide repeat-containing protein 123, partial
[Acantholippia seriphioides]
Length = 416
Score = 144 bits (364), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 96/363 (26%), Positives = 175/363 (48%), Gaps = 37/363 (10%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
LI K D++KA + S + + G+ P +V++ A++ +G+ ++ A ++ M+ SG
Sbjct: 52 LIELSRKLCDYSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMKXSG 111
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
P+ +Y +L ++VE KF EA VF + + E K L D ++MI +Y + G +
Sbjct: 112 VMPNTASYSTLLTMYVENKKFLEALSVF-SEMREVKCLL--DLTTCNIMIDVYGQLGMAK 168
Query: 222 KARKLFALMAERGVQQSTVTYNSLMSFETN---YKEVSKIYDQMQRAGLQPDVVSYALLI 278
+A KLF M + G++ + V+YN+L+ + + E ++ MQR ++ +VV+Y +I
Sbjct: 169 EADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMI 228
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCS 338
YGK E+A + +EM G+ P Y+ ++ + G +D+A +F+ +R
Sbjct: 229 MIYGKTLEHEKANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVE 288
Query: 339 PDICSYTTMLSAY-------------------------------VNASDMEGAEKFFRRL 367
D + TM+ AY A +E A FR+
Sbjct: 289 IDQILFQTMIVAYERAGLVAHAKRLLHELKRPDNIPRDTAIHILAGAGRIEEATYVFRQA 348
Query: 368 KQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDF 427
G V ++ + +I +K ++E++DKMR G P+ + +++AYGK +F
Sbjct: 349 IDAGEVKDITVFERMIHLLSKYKKYANVVEVFDKMRGLGYFPDSDVIALVLNAYGKLHEF 408
Query: 428 DSA 430
D A
Sbjct: 409 DKA 411
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 84/326 (25%), Positives = 156/326 (47%), Gaps = 6/326 (1%)
Query: 157 MQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKK 216
M+ P TY ++ F + F +A ++ +++++ P D ++ +I + +K
Sbjct: 2 MRQRALSPDRYTYSTLITHFGKEGLF-DAALSWLQKMEQDRVP--GDLVLYSNLIELSRK 58
Query: 217 AGGYEKARKLFALMAERGVQQSTVTYNSLMSF---ETNYKEVSKIYDQMQRAGLQPDVVS 273
Y KA +F+ + G V YN++++ ++E + +M+ +G+ P+ S
Sbjct: 59 LCDYSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMKXSGVMPNTAS 118
Query: 274 YALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMR 333
Y+ L+ Y + ++ EAL+VF EM + NI++D + GM +A +F MR
Sbjct: 119 YSTLLTMYVENKKFLEALSVFSEMREVKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMR 178
Query: 334 RDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLE 393
+ P++ SY T+L Y +A A FR +++ NV+TY ++I Y K E
Sbjct: 179 KMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMIMIYGKTLEHE 238
Query: 394 KMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILL 453
K + +M+ GI+PN ++TI+ +GK D A + ++++ S G DQ ++
Sbjct: 239 KANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQILFQTMI 298
Query: 454 SLAKTADERNEANELLGNFNHPNNEP 479
+ A A LL P+N P
Sbjct: 299 VAYERAGLVAHAKRLLHELKRPDNIP 324
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 46/186 (24%), Positives = 82/186 (44%)
Query: 296 EMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNAS 355
EM + P Y+ L+ F G+ D A + + M +DR D+ Y+ ++
Sbjct: 1 EMRQRALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLC 60
Query: 356 DMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFT 415
D A F RLK+ GF P+++ Y +I + K + + +M+ +G+ PN ++
Sbjct: 61 DYSKAISIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLISEMKXSGVMPNTASYS 120
Query: 416 TIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHP 475
T++ Y +NK F A+ + EM D NI++ + EA++L
Sbjct: 121 TLLTMYVENKKFLEALSVFSEMREVKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKM 180
Query: 476 NNEPGI 481
EP +
Sbjct: 181 GIEPNV 186
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/236 (23%), Positives = 112/236 (47%), Gaps = 6/236 (2%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + + L+ YG F +A + M +K +VV++ +++ YG+ ++ A +
Sbjct: 185 NVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMIMIYGKTLEHEKANNLI 244
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
+ MQS G P+++TY I+ ++ + K A +F L S ++ DQ +F MI Y
Sbjct: 245 QEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKL---RSSGVEIDQILFQTMIVAY 301
Query: 215 KKAGGYEKARKLFA-LMAERGVQQSTVTYNSLMSFETNYKEVSKIYDQMQRAGLQPDVVS 273
++AG A++L L + + T + +++ +E + ++ Q AG D+
Sbjct: 302 ERAGLVAHAKRLLHELKRPDNIPRDTAIH--ILAGAGRIEEATYVFRQAIDAGEVKDITV 359
Query: 274 YALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVF 329
+ +I+ K ++ + VF++M G P ++L+A+ D+A V+
Sbjct: 360 FERMIHLLSKYKKYANVVEVFDKMRGLGYFPDSDVIALVLNAYGKLHEFDKANDVY 415
>gi|168025874|ref|XP_001765458.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162683308|gb|EDQ69719.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 670
Score = 144 bits (364), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 110/450 (24%), Positives = 198/450 (44%), Gaps = 43/450 (9%)
Query: 69 RLKQLKKWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYA 128
+L Q++ W ++V R + + N LI A G ++A K+ +M K G
Sbjct: 191 QLGQMQNWYAATKVFRAFR-SAGVEPNAYVCTTLIAALGCGRRLSQALKLFRWMEKAGIE 249
Query: 129 PSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEV 188
+ + ALM A GR A +F M+ G P +T+ ++ A + A+
Sbjct: 250 RPIFTFNALMVACGRCASGDTAVELFEEMEKLGIVPDRITFTGLVSATTAAGLWDRAQS- 308
Query: 189 FMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLM-S 247
F+ ++ + + + M + +A +A LF +M E+G + +YN+L+ +
Sbjct: 309 FIDMMQARGFSIGLHE--YIEMQWACARARKPREAYGLFQVMLEQGYELKLESYNALLCA 366
Query: 248 FE--TNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPT 305
+E +++ + + +Q GL PDV+S++ LI+A A + E AL V E M + +P
Sbjct: 367 YERTAQWEDAMRTFIWIQDKGLTPDVMSWSSLISACANAGQAERALEVLERMKTSDCQPN 426
Query: 306 HKAYNILLDAFAISGMVDQARTVFKCMRRDRCSP-------------------------- 339
++ LL A+ +G ++A +F M C P
Sbjct: 427 VVSWCGLLKAYQKTGNWEKAEEIFHAMLDSGCPPNEVAWCSLLSAYEKGRQWKKVLYTIE 486
Query: 340 ---------DICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVN 390
D+ +++T +SA A E AE+ F+++ + G +PN++TY +LIK Y V
Sbjct: 487 KLEELGMKLDVVAWSTTISALAKAGQWELAEEKFKQMTKSGCLPNIVTYSSLIKAYGDVG 546
Query: 391 NLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEME-SCGFPPDQKAK 449
EK ++ M GI+PN ++ AYGK K+ + +++++ ME G PD+ A
Sbjct: 547 LWEKAESVFKLMLRVGIRPNPQACCALLRAYGKGKELEKVIIFFESMEPQYGVEPDKYAY 606
Query: 450 NILLSLAKTADERNEANELLGNFNHPNNEP 479
+ T E A + + P
Sbjct: 607 AAIFWACWTCGEWQRAVKYIDRMEMAGCTP 636
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 90/373 (24%), Positives = 166/373 (44%), Gaps = 6/373 (1%)
Query: 112 FNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQI 171
N E V+ +N+ G V S ++ G+ + A +FR +S+G P+A
Sbjct: 163 LNSDEDVMKIVNETGLRVDVRSMNVVVWQLGQMQNWYAATKVFRAFRSAGVEPNAYVCTT 222
Query: 172 ILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMA 231
++ + +A ++F + EK+ ++ F+ ++ + + A +LF M
Sbjct: 223 LIAALGCGRRLSQALKLFRWM---EKAGIERPIFTFNALMVACGRCASGDTAVELFEEME 279
Query: 232 ERGVQQSTVTYNSLMSFETN---YKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREE 288
+ G+ +T+ L+S T + D MQ G + Y + A +AR+
Sbjct: 280 KLGIVPDRITFTGLVSATTAAGLWDRAQSFIDMMQARGFSIGLHEYIEMQWACARARKPR 339
Query: 289 EALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTML 348
EA +F+ ML+ G ++YN LL A+ + + A F ++ +PD+ S+++++
Sbjct: 340 EAYGLFQVMLEQGYELKLESYNALLCAYERTAQWEDAMRTFIWIQDKGLTPDVMSWSSLI 399
Query: 349 SAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIK 408
SA NA E A + R+K PNV+++ L+K Y K N EK EI+ M +G
Sbjct: 400 SACANAGQAERALEVLERMKTSDCQPNVVSWCGLLKAYQKTGNWEKAEEIFHAMLDSGCP 459
Query: 409 PNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANEL 468
PN+ + +++ AY K + + + +++E G D A + +S A + A E
Sbjct: 460 PNEVAWCSLLSAYEKGRQWKKVLYTIEKLEELGMKLDVVAWSTTISALAKAGQWELAEEK 519
Query: 469 LGNFNHPNNEPGI 481
P I
Sbjct: 520 FKQMTKSGCLPNI 532
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 86/379 (22%), Positives = 182/379 (48%), Gaps = 7/379 (1%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
+ + F L++A G +++A+ + M +G++ + + + A R + + A +F
Sbjct: 286 DRITFTGLVSATTAAGLWDRAQSFIDMMQARGFSIGLHEYIEMQWACARARKPREAYGLF 345
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
+ M G +Y +L + ++++A F+ + D+ L PD + +I
Sbjct: 346 QVMLEQGYELKLESYNALLCAYERTAQWEDAMRTFIWIQDK---GLTPDVMSWSSLISAC 402
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSLMSF---ETNYKEVSKIYDQMQRAGLQPDV 271
AG E+A ++ M Q + V++ L+ N+++ +I+ M +G P+
Sbjct: 403 ANAGQAERALEVLERMKTSDCQPNVVSWCGLLKAYQKTGNWEKAEEIFHAMLDSGCPPNE 462
Query: 272 VSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKC 331
V++ L++AY K R+ ++ L E++ + G++ A++ + A A +G + A FK
Sbjct: 463 VAWCSLLSAYEKGRQWKKVLYTIEKLEELGMKLDVVAWSTTISALAKAGQWELAEEKFKQ 522
Query: 332 MRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNN 391
M + C P+I +Y++++ AY + E AE F+ + + G PN L++ Y K
Sbjct: 523 MTKSGCLPNIVTYSSLIKAYGDVGLWEKAESVFKLMLRVGIRPNPQACCALLRAYGKGKE 582
Query: 392 LEKMMEIYDKMRVN-GIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKN 450
LEK++ ++ M G++P++ + I A ++ AV + ME G PD
Sbjct: 583 LEKVIIFFESMEPQYGVEPDKYAYAAIFWACWTCGEWQRAVKYIDRMEMAGCTPDSVIYT 642
Query: 451 ILLSLAKTADERNEANELL 469
L+++ + + ++A ++L
Sbjct: 643 TLINMYEANGQIDKAMQVL 661
Score = 118 bits (296), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 82/348 (23%), Positives = 156/348 (44%), Gaps = 6/348 (1%)
Query: 101 MLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSS 160
+++ G+ ++ A KV G P+ T L+ A G G R A +FR M+ +
Sbjct: 187 VVVWQLGQMQNWYAATKVFRAFRSAGVEPNAYVCTTLIAALGCGRRLSQALKLFRWMEKA 246
Query: 161 GPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGY 220
G T+ ++ A E+F + EK + PD+ F ++ AG +
Sbjct: 247 GIERPIFTFNALMVACGRCASGDTAVELFEEM---EKLGIVPDRITFTGLVSATTAAGLW 303
Query: 221 EKARKLFALMAERGVQQSTVTYNSL---MSFETNYKEVSKIYDQMQRAGLQPDVVSYALL 277
++A+ +M RG Y + + +E ++ M G + + SY L
Sbjct: 304 DRAQSFIDMMQARGFSIGLHEYIEMQWACARARKPREAYGLFQVMLEQGYELKLESYNAL 363
Query: 278 INAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRC 337
+ AY + + E+A+ F + D G+ P +++ L+ A A +G ++A V + M+ C
Sbjct: 364 LCAYERTAQWEDAMRTFIWIQDKGLTPDVMSWSSLISACANAGQAERALEVLERMKTSDC 423
Query: 338 SPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMME 397
P++ S+ +L AY + E AE+ F + G PN + + +L+ Y K +K++
Sbjct: 424 QPNVVSWCGLLKAYQKTGNWEKAEEIFHAMLDSGCPPNEVAWCSLLSAYEKGRQWKKVLY 483
Query: 398 IYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPD 445
+K+ G+K + ++T + A K ++ A +K+M G P+
Sbjct: 484 TIEKLEELGMKLDVVAWSTTISALAKAGQWELAEEKFKQMTKSGCLPN 531
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 60/242 (24%), Positives = 116/242 (47%), Gaps = 7/242 (2%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + + L+ AY K G++ KAE++ M G P+ V+ +L+ AY +G ++K
Sbjct: 426 NVVSWCGLLKAYQKTGNWEKAEEIFHAMLDSGCPPNEVAWCSLLSAYEKGRQWKKVLYTI 485
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
+++ G + + + + +A +++ AEE F + KS P+ + +I Y
Sbjct: 486 EKLEELGMKLDVVAWSTTISALAKAGQWELAEEKFKQM---TKSGCLPNIVTYSSLIKAY 542
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSKI---YDQMQ-RAGLQPD 270
G +EKA +F LM G++ + +L+ KE+ K+ ++ M+ + G++PD
Sbjct: 543 GDVGLWEKAESVFKLMLRVGIRPNPQACCALLRAYGKGKELEKVIIFFESMEPQYGVEPD 602
Query: 271 VVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFK 330
+YA + A + A+ + M AG P Y L++ + +G +D+A V +
Sbjct: 603 KYAYAAIFWACWTCGEWQRAVKYIDRMEMAGCTPDSVIYTTLINMYEANGQIDKAMQVLE 662
Query: 331 CM 332
M
Sbjct: 663 RM 664
>gi|222613072|gb|EEE51204.1| hypothetical protein OsJ_32019 [Oryza sativa Japonica Group]
Length = 615
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 94/367 (25%), Positives = 167/367 (45%), Gaps = 12/367 (3%)
Query: 99 FLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNA-EAIFRRM 157
+ +LI + G + L + KKG+ ++ T L++ R +A + + RRM
Sbjct: 95 YAILIGCCCRAGRLDLGFAALGNVVKKGFRVDAITFTPLLKGLCADKRTSDAMDIVLRRM 154
Query: 158 QSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKA 217
G P +Y +LK + N+ +EA E+ + D+ PD ++ ++ + K
Sbjct: 155 TELGCIPDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNTVLNGFFKE 214
Query: 218 G--------GYEKARKLFALMAERGVQQSTVTYNSLMSFETNY---KEVSKIYDQMQRAG 266
G +KA ++ M + GV +TYNS++ + KE +M+ G
Sbjct: 215 GIQTKLTAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDG 274
Query: 267 LQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQAR 326
++P+VV+Y+ L+N K R EA +F+ M G+ P Y LL G V ++
Sbjct: 275 VEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGHCKEGRVIESE 334
Query: 327 TVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGY 386
+F M R PDI +Y T++ A M+ A K + G P+++TYGTLI GY
Sbjct: 335 KLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLINGY 394
Query: 387 AKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQ 446
+V+ ++ + ++ +M +G+ PN + I+ + +A Y + G +
Sbjct: 395 CRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVSITKSGTQLEL 454
Query: 447 KAKNILL 453
NI+L
Sbjct: 455 STYNIIL 461
Score = 141 bits (356), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 98/399 (24%), Positives = 179/399 (44%), Gaps = 17/399 (4%)
Query: 118 VLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRM---QSSGPRPSALTYQIILK 174
VL M + G P V S+ L++ R + A + M + G P ++Y +L
Sbjct: 150 VLRRMTELGCIPDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNTVLN 209
Query: 175 LF--------VEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKL 226
F + A +A EV T++ K+ + PD ++ +++ Y +G ++A
Sbjct: 210 GFFKEGIQTKLTAQAMDKAMEVLNTMV---KNGVMPDCMTYNSILHGYCSSGQPKEAIGT 266
Query: 227 FALMAERGVQQSTVTYNSLMSFETN---YKEVSKIYDQMQRAGLQPDVVSYALLINAYGK 283
M GV+ + VTY+SLM++ E KI+D M + GL+PD+ +Y L+ + K
Sbjct: 267 LKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGHCK 326
Query: 284 ARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICS 343
R E+ +F+ M+ GV+P YN L+D ++G +D+A + M PDI +
Sbjct: 327 EGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVT 386
Query: 344 YTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMR 403
Y T+++ Y S M+ A F+ + G PN+ITY +++G E+Y +
Sbjct: 387 YGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVSIT 446
Query: 404 VNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERN 463
+G + + + I+ KN D A+ ++ + + + NI++ +
Sbjct: 447 KSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKCGRMD 506
Query: 464 EANELLGNFNHPNNEPGINGLSISVDEEDDDDDDDEDDD 502
EA +L + P + S+ + + +E DD
Sbjct: 507 EAKDLFAAHSANGLVPDVRTYSLMAENLIEQGSLEELDD 545
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 90/380 (23%), Positives = 172/380 (45%), Gaps = 41/380 (10%)
Query: 112 FNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQI 171
+KA +VL+ M K G P +++ +++ Y G+ K A ++M+S G P+ +TY
Sbjct: 225 MDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSS 284
Query: 172 ILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMA 231
++ + + EA ++F ++ K L+PD + ++ + K G ++ KLF LM
Sbjct: 285 LMNYLCKNGRSTEARKIFDSM---TKRGLEPDIATYRTLLQGHCKEGRVIESEKLFDLMV 341
Query: 232 ERGVQQSTVTYNSLM---SFETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREE 288
GV+ +TYN+L+ E +K+ M G++PD+V+Y LIN Y + R +
Sbjct: 342 RIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLINGYCRVSRMD 401
Query: 289 EALAVFEEMLDAGVRPT------------H-----------------------KAYNILL 313
+ALA+F+EM+ +GV P H YNI+L
Sbjct: 402 DALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVSITKSGTQLELSTYNIIL 461
Query: 314 DAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFV 373
+ + D+A +F+ + + ++ M+ A + M+ A+ F +G V
Sbjct: 462 HGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKCGRMDEAKDLFAAHSANGLV 521
Query: 374 PNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVW 433
P+V TY + + + +LE++ +++ M NG + + +I+ + D A +
Sbjct: 522 PDVRTYSLMAENLIEQGSLEELDDLFLSMEENGCSADSRMLNSIVRKLLQRGDITRAGTY 581
Query: 434 YKEMESCGFPPDQKAKNILL 453
++ F + + LL
Sbjct: 582 LFMIDEKHFSLEASTASFLL 601
Score = 105 bits (261), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 64/280 (22%), Positives = 134/280 (47%), Gaps = 6/280 (2%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + + L+ K G +A K+ M K+G P + ++ L++ + + GR +E +F
Sbjct: 278 NVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGHCKEGRVIESEKLF 337
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
M G +P +TY ++ A K EA ++ +++ +KPD + +I Y
Sbjct: 338 DLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVS---VGVKPDIVTYGTLINGY 394
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSLMS--FETNYKEVSK-IYDQMQRAGLQPDV 271
+ + A LF M GV + +TYN ++ F T +K +Y + ++G Q ++
Sbjct: 395 CRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVSITKSGTQLEL 454
Query: 272 VSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKC 331
+Y ++++ K +EAL +F+ + ++ + +NI++ A G +D+A+ +F
Sbjct: 455 STYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKCGRMDEAKDLFAA 514
Query: 332 MRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDG 371
+ PD+ +Y+ M + +E + F ++++G
Sbjct: 515 HSANGLVPDVRTYSLMAENLIEQGSLEELDDLFLSMEENG 554
>gi|255661172|gb|ACU25755.1| pentatricopeptide repeat-containing protein [Junellia seriphioides]
Length = 426
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 97/374 (25%), Positives = 180/374 (48%), Gaps = 37/374 (9%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
LI K D++KA + S + + + P +V++ A++ +G+ ++ A ++ M+++G
Sbjct: 50 LIELSRKLCDYSKAISIFSRLKRSRFTPDLVAYNAMINVFGKAKLFREARSLISEMRTAG 109
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
P+ +Y +L ++VE KF EA VF + E K L D ++MI +Y + G +
Sbjct: 110 VTPNTASYSTLLTMYVENKKFLEALSVFAEM-REIKCLL--DLTTCNIMIDVYGQLGMAK 166
Query: 222 KARKLFALMAERGVQQSTVTYNSLMSFETN---YKEVSKIYDQMQRAGLQPDVVSYALLI 278
+A KLF M + G++ + V+YN+L+ + + E ++ MQR ++ +VV+Y ++
Sbjct: 167 EADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMM 226
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCS 338
YGK E+A + +EM + G+ P Y+ ++ + G +D+A +F+ +R
Sbjct: 227 MIYGKTLEHEKANNLIQEMQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVD 286
Query: 339 PDICSYTTMLSAY-------------------------------VNASDMEGAEKFFRRL 367
D Y TM+ AY A +E A FR+
Sbjct: 287 IDQVLYQTMIVAYERSGLVAHAKRLLHELKRPDNIPRDIAIHILAGAGRIEEATWVFRQA 346
Query: 368 KQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDF 427
G V ++ + +I ++K ++E++DKM G P+ + +++AYGK +F
Sbjct: 347 IDAGEVKDITVFERMIHLFSKYKKYGNVVEVFDKMCGLGYFPDSNVIALVLNAYGKLHEF 406
Query: 428 DSAVVWYKEMESCG 441
D A Y EM+ G
Sbjct: 407 DKANDVYMEMQEVG 420
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 83/318 (26%), Positives = 145/318 (45%), Gaps = 38/318 (11%)
Query: 200 LKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFE---TNYKEVS 256
L PD+ + +I + K G ++ A M + V V Y++L+ +Y +
Sbjct: 5 LSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDYSKAI 64
Query: 257 KIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAF 316
I+ +++R+ PD+V+Y +IN +GKA+ EA ++ EM AGV P +Y+ LL +
Sbjct: 65 SIFSRLKRSRFTPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVTPNTASYSTLLTMY 124
Query: 317 AISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNV 376
+ +A +VF MR +C D+ + M+ Y + A+K F +++ G PNV
Sbjct: 125 VENKKFLEALSVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPNV 184
Query: 377 ITYGTLIKGYA---------------KVNNLEK-------MMEIYDK------------- 401
++Y TL++ Y + N+E+ MM IY K
Sbjct: 185 VSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLIQE 244
Query: 402 MRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADE 461
M+ GI+PN ++TI+ +GK D A + ++++ S G DQ ++ + +
Sbjct: 245 MQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVDIDQVLYQTMIVAYERSGL 304
Query: 462 RNEANELLGNFNHPNNEP 479
A LL P+N P
Sbjct: 305 VAHAKRLLHELKRPDNIP 322
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 78/181 (43%)
Query: 301 GVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGA 360
+ P Y+ L+ F G+ D A + + M +DR D+ Y+ ++ D A
Sbjct: 4 ALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDYSKA 63
Query: 361 EKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDA 420
F RLK+ F P+++ Y +I + K + + +MR G+ PN ++T++
Sbjct: 64 ISIFSRLKRSRFTPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVTPNTASYSTLLTM 123
Query: 421 YGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPG 480
Y +NK F A+ + EM D NI++ + EA++L EP
Sbjct: 124 YVENKKFLEALSVFAEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMRKMGIEPN 183
Query: 481 I 481
+
Sbjct: 184 V 184
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/244 (22%), Positives = 114/244 (46%), Gaps = 6/244 (2%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + + L+ YG F +A + M +K +VV++ ++M YG+ ++ A +
Sbjct: 183 NVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLI 242
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
+ MQ+ G P+++TY I+ ++ + K A +F L S + DQ ++ MI Y
Sbjct: 243 QEMQNRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKL---RSSGVDIDQVLYQTMIVAY 299
Query: 215 KKAGGYEKARKLFA-LMAERGVQQSTVTYNSLMSFETNYKEVSKIYDQMQRAGLQPDVVS 273
+++G A++L L + + + +++ +E + ++ Q AG D+
Sbjct: 300 ERSGLVAHAKRLLHELKRPDNIPRDIAIH--ILAGAGRIEEATWVFRQAIDAGEVKDITV 357
Query: 274 YALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMR 333
+ +I+ + K ++ + VF++M G P ++L+A+ D+A V+ M+
Sbjct: 358 FERMIHLFSKYKKYGNVVEVFDKMCGLGYFPDSNVIALVLNAYGKLHEFDKANDVYMEMQ 417
Query: 334 RDRC 337
C
Sbjct: 418 EVGC 421
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/123 (21%), Positives = 63/123 (51%)
Query: 333 RRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNL 392
R SPD +Y+T+++ + + A + ++++QD +++ Y LI+ K+ +
Sbjct: 1 RERALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDY 60
Query: 393 EKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNIL 452
K + I+ +++ + P+ + +++ +GK K F A EM + G P+ + + L
Sbjct: 61 SKAISIFSRLKRSRFTPDLVAYNAMINVFGKAKLFREARSLISEMRTAGVTPNTASYSTL 120
Query: 453 LSL 455
L++
Sbjct: 121 LTM 123
>gi|226493231|ref|NP_001140656.1| hypothetical protein [Zea mays]
gi|194700420|gb|ACF84294.1| unknown [Zea mays]
gi|414587025|tpg|DAA37596.1| TPA: hypothetical protein ZEAMMB73_567962 [Zea mays]
Length = 598
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 91/375 (24%), Positives = 179/375 (47%), Gaps = 7/375 (1%)
Query: 101 MLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSS 160
+L+ A K + +A +++ FM +G P+ V++ +++A R G A + + S
Sbjct: 203 ILLQAACKGRGYRQALELIDFMRAEGCEPNNVTYNVIIDAMCREGDVDQARELLNSLPSR 262
Query: 161 GPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGY 220
G +P+ + Y +LK F ++ +A+E+ ++ E P++ +++I + G
Sbjct: 263 GCKPNTVNYNTVLKGFCSIERWVDADEILDEMVREN---CPPNEATLNVIINTLCRKGLL 319
Query: 221 EKARKLFALMAERGVQQSTVTYNSLMSF---ETNYKEVSKIYDQMQRAGLQPDVVSYALL 277
+K M++ G + VTYN+++S + N ++ MQ G +PD+V+Y +
Sbjct: 320 QKVTLYLEKMSKHGCTANVVTYNAVISGMCEQGNVDSALELLSNMQSFGCKPDIVTYNTV 379
Query: 278 INAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRC 337
+ A R E+A + +M P + +N ++ + G++ QA VFK M C
Sbjct: 380 LKGLCSADRWEDAEELMIKMSQNDRLPDNSTFNTIISFWCQKGLILQAFEVFKQMPEKGC 439
Query: 338 SPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMME 397
+P+ +Y+T++ A ME A + + GF + + Y L + K + +E++++
Sbjct: 440 NPNSTTYSTIIGGLTKAGKMEQALELLNEMANKGFNTDKM-YRVLTESLNKEDKIEEVVQ 498
Query: 398 IYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAK 457
+ K++ +GI P ++ T++ +N D A+ +M SCG PD+ IL+
Sbjct: 499 VVHKLQDSGISPQTVLYNTVLLGLCRNGKTDYAIDVLADMVSCGCMPDESTYIILIEGLF 558
Query: 458 TADERNEANELLGNF 472
EA ELL
Sbjct: 559 YEGYSKEARELLSRL 573
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 89/360 (24%), Positives = 165/360 (45%), Gaps = 8/360 (2%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
L+ Y + G A +V+ M A S +H L+ A GR +A + M G
Sbjct: 134 LVDGYCRAGLLEDARRVVGGMPAHVQASSAYAHNPLIHALCERGRVADALVVLDGMLCRG 193
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
P +TY I+L+ + +++A E+ + E +P+ ++++I + G +
Sbjct: 194 CAPDVVTYNILLQAACKGRGYRQALELIDFMRAEG---CEPNNVTYNVIIDAMCREGDVD 250
Query: 222 KARKLFALMAERGVQQSTVTYNSLM----SFETNYKEVSKIYDQMQRAGLQPDVVSYALL 277
+AR+L + RG + +TV YN+++ S E + + +I D+M R P+ + ++
Sbjct: 251 QARELLNSLPSRGCKPNTVNYNTVLKGFCSIE-RWVDADEILDEMVRENCPPNEATLNVI 309
Query: 278 INAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRC 337
IN + ++ E+M G YN ++ G VD A + M+ C
Sbjct: 310 INTLCRKGLLQKVTLYLEKMSKHGCTANVVTYNAVISGMCEQGNVDSALELLSNMQSFGC 369
Query: 338 SPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMME 397
PDI +Y T+L +A E AE+ ++ Q+ +P+ T+ T+I + + + + E
Sbjct: 370 KPDIVTYNTVLKGLCSADRWEDAEELMIKMSQNDRLPDNSTFNTIISFWCQKGLILQAFE 429
Query: 398 IYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAK 457
++ +M G PN T ++TI+ K + A+ EM + GF D+ + + SL K
Sbjct: 430 VFKQMPEKGCNPNSTTYSTIIGGLTKAGKMEQALELLNEMANKGFNTDKMYRVLTESLNK 489
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 71/347 (20%), Positives = 154/347 (44%), Gaps = 6/347 (1%)
Query: 126 GYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEA 185
G + ++ AL++ Y R G ++A + M + SA + ++ E + +A
Sbjct: 123 GPEATAATYGALVDGYCRAGLLEDARRVVGGMPAHVQASSAYAHNPLIHALCERGRVADA 182
Query: 186 EEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSL 245
V +L +P D +++++ K GY +A +L M G + + VTYN +
Sbjct: 183 LVVLDGMLCRGCAP---DVVTYNILLQAACKGRGYRQALELIDFMRAEGCEPNNVTYNVI 239
Query: 246 ---MSFETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGV 302
M E + + ++ + + G +P+ V+Y ++ + R +A + +EM+
Sbjct: 240 IDAMCREGDVDQARELLNSLPSRGCKPNTVNYNTVLKGFCSIERWVDADEILDEMVRENC 299
Query: 303 RPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEK 362
P N++++ G++ + + M + C+ ++ +Y ++S +++ A +
Sbjct: 300 PPNEATLNVIINTLCRKGLLQKVTLYLEKMSKHGCTANVVTYNAVISGMCEQGNVDSALE 359
Query: 363 FFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYG 422
++ G P+++TY T++KG + E E+ KM N P+ + F TI+ +
Sbjct: 360 LLSNMQSFGCKPDIVTYNTVLKGLCSADRWEDAEELMIKMSQNDRLPDNSTFNTIISFWC 419
Query: 423 KNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELL 469
+ A +K+M G P+ + ++ A + +A ELL
Sbjct: 420 QKGLILQAFEVFKQMPEKGCNPNSTTYSTIIGGLTKAGKMEQALELL 466
Score = 105 bits (262), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 89/370 (24%), Positives = 147/370 (39%), Gaps = 47/370 (12%)
Query: 103 ITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGP 162
++A +GD + A L + P V L+ R GR +A R +++ GP
Sbjct: 71 LSALIHRGDLDAA---LRLVGSSPRPPDVPLANRLVRDLCRRGRPADAA---RVVEACGP 124
Query: 163 RPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEK 222
+A TY L+D Y +AG E
Sbjct: 125 EATAATYG--------------------ALVDG------------------YCRAGLLED 146
Query: 223 ARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSK---IYDQMQRAGLQPDVVSYALLIN 279
AR++ M S +N L+ V+ + D M G PDVV+Y +L+
Sbjct: 147 ARRVVGGMPAHVQASSAYAHNPLIHALCERGRVADALVVLDGMLCRGCAPDVVTYNILLQ 206
Query: 280 AYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSP 339
A K R +AL + + M G P + YN+++DA G VDQAR + + C P
Sbjct: 207 AACKGRGYRQALELIDFMRAEGCEPNNVTYNVIIDAMCREGDVDQARELLNSLPSRGCKP 266
Query: 340 DICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIY 399
+ +Y T+L + + A++ + ++ PN T +I + L+K+
Sbjct: 267 NTVNYNTVLKGFCSIERWVDADEILDEMVRENCPPNEATLNVIINTLCRKGLLQKVTLYL 326
Query: 400 DKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTA 459
+KM +G N + ++ + + DSA+ M+S G PD N +L +A
Sbjct: 327 EKMSKHGCTANVVTYNAVISGMCEQGNVDSALELLSNMQSFGCKPDIVTYNTVLKGLCSA 386
Query: 460 DERNEANELL 469
D +A EL+
Sbjct: 387 DRWEDAEELM 396
Score = 101 bits (252), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 75/319 (23%), Positives = 146/319 (45%), Gaps = 13/319 (4%)
Query: 72 QLKKWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSV 131
+++W E+L+ + ++ NE ++I ++G K L M+K G +V
Sbjct: 280 SIERWVDADEILDEM-VRENCPPNEATLNVIINTLCRKGLLQKVTLYLEKMSKHGCTANV 338
Query: 132 VSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMT 191
V++ A++ G +A + MQS G +P +TY +LK A+++++AEE+ +
Sbjct: 339 VTYNAVISGMCEQGNVDSALELLSNMQSFGCKPDIVTYNTVLKGLCSADRWEDAEELMIK 398
Query: 192 LLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFET- 250
+ ++ PD F+ +I + + G +A ++F M E+G ++ TY++++ T
Sbjct: 399 MSQNDR---LPDNSTFNTIISFWCQKGLILQAFEVFKQMPEKGCNPNSTTYSTIIGGLTK 455
Query: 251 --NYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKA 308
++ ++ ++M G D + Y +L + K + EE + V ++ D+G+ P
Sbjct: 456 AGKMEQALELLNEMANKGFNTDKM-YRVLTESLNKEDKIEEVVQVVHKLQDSGISPQTVL 514
Query: 309 YNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLK 368
YN +L +G D A V M C PD +Y ++ + A + RL
Sbjct: 515 YNTVLLGLCRNGKTDYAIDVLADMVSCGCMPDESTYIILIEGLFYEGYSKEARELLSRLC 574
Query: 369 QDGFVPNVITYGTLIKGYA 387
+ N +LIK A
Sbjct: 575 SRDVLSN-----SLIKNEA 588
>gi|15231863|ref|NP_190938.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75174107|sp|Q9LFF1.1|PP281_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g53700, chloroplastic; AltName: Full=Protein MATERNAL
EFFECT EMBRYO ARREST 40; Flags: Precursor
gi|6729521|emb|CAB67677.1| putative protein [Arabidopsis thaliana]
gi|15982931|gb|AAL09812.1| AT3g53700/F4P12_400 [Arabidopsis thaliana]
gi|332645608|gb|AEE79129.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 754
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 99/379 (26%), Positives = 177/379 (46%), Gaps = 7/379 (1%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
+E F ++ Y ++GD + A ++ M + G + S VS ++ + + GR ++A
Sbjct: 223 DEKTFTTVMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFI 282
Query: 155 RRMQSS-GPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYM 213
+ M + G P T+ ++ +A K A E+ +L E PD ++ +I
Sbjct: 283 QEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEG---YDPDVYTYNSVISG 339
Query: 214 YKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSF---ETNYKEVSKIYDQMQRAGLQPD 270
K G ++A ++ M R +TVTYN+L+S E +E +++ + G+ PD
Sbjct: 340 LCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPD 399
Query: 271 VVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFK 330
V ++ LI R A+ +FEEM G P YN+L+D+ G +D+A + K
Sbjct: 400 VCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLK 459
Query: 331 CMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVN 390
M C+ + +Y T++ + A+ AE+ F ++ G N +TY TLI G K
Sbjct: 460 QMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSR 519
Query: 391 NLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKN 450
+E ++ D+M + G KP++ + +++ + + D A + M S G PD
Sbjct: 520 RVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYG 579
Query: 451 ILLSLAKTADERNEANELL 469
L+S A A++LL
Sbjct: 580 TLISGLCKAGRVEVASKLL 598
Score = 131 bits (330), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 87/359 (24%), Positives = 163/359 (45%), Gaps = 7/359 (1%)
Query: 99 FLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQ 158
F L+ K G A +++ M ++GY P V ++ +++ + G K A + +M
Sbjct: 298 FNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMI 357
Query: 159 SSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAG 218
+ P+ +TY ++ + N+ +EA E+ L + + PD F+ +I
Sbjct: 358 TRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKG---ILPDVCTFNSLIQGLCLTR 414
Query: 219 GYEKARKLFALMAERGVQQSTVTYNSL---MSFETNYKEVSKIYDQMQRAGLQPDVVSYA 275
+ A +LF M +G + TYN L + + E + QM+ +G V++Y
Sbjct: 415 NHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYN 474
Query: 276 LLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRD 335
LI+ + KA + EA +F+EM GV YN L+D S V+ A + M +
Sbjct: 475 TLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIME 534
Query: 336 RCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKM 395
PD +Y ++L+ + D++ A + + +G P+++TYGTLI G K +E
Sbjct: 535 GQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVA 594
Query: 396 MEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEM-ESCGFPPDQKAKNILL 453
++ +++ GI + ++ + + A+ ++EM E PPD + I+
Sbjct: 595 SKLLRSIQMKGINLTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAPPDAVSYRIVF 653
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 96/386 (24%), Positives = 172/386 (44%), Gaps = 5/386 (1%)
Query: 99 FLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQ 158
F +LI A + A +L M G P + T +M+ Y G A I +M
Sbjct: 192 FNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQMV 251
Query: 159 SSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAG 218
G S ++ +I+ F + + ++A + +++ PDQ F+ ++ KAG
Sbjct: 252 EFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDG--FFPDQYTFNTLVNGLCKAG 309
Query: 219 GYEKARKLFALMAERGVQQSTVTYNSLMSFETNY---KEVSKIYDQMQRAGLQPDVVSYA 275
+ A ++ +M + G TYNS++S KE ++ DQM P+ V+Y
Sbjct: 310 HVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYN 369
Query: 276 LLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRD 335
LI+ K + EEA + + G+ P +N L+ ++ A +F+ MR
Sbjct: 370 TLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSK 429
Query: 336 RCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKM 395
C PD +Y ++ + + ++ A ++++ G +VITY TLI G+ K N +
Sbjct: 430 GCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREA 489
Query: 396 MEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSL 455
EI+D+M V+G+ N + T++D K++ + A +M G PD+ N LL+
Sbjct: 490 EEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTH 549
Query: 456 AKTADERNEANELLGNFNHPNNEPGI 481
+ +A +++ EP I
Sbjct: 550 FCRGGDIKKAADIVQAMTSNGCEPDI 575
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 97/441 (21%), Positives = 168/441 (38%), Gaps = 73/441 (16%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKK-GYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSS 160
L+ + Q D + A ++ + +KK ++P + ++ GR G + + + I M+SS
Sbjct: 53 LLDSLRSQPDDSAALRLFNLASKKPNFSPEPALYEEILLRLGRSGSFDDMKKILEDMKSS 112
Query: 161 ------------------------------------GPRPSALTYQIILKLFVEANKFKE 184
G +P Y +L L V+ N K
Sbjct: 113 RCEMGTSTFLILIESYAQFELQDEILSVVDWMIDEFGLKPDTHFYNRMLNLLVDGNSLKL 172
Query: 185 AE--------------------------------EVFMTLLDEEKSPLKPDQKMFHMMIY 212
E + L D L PD+K F ++
Sbjct: 173 VEISHAKMSVWGIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQ 232
Query: 213 MYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSKIYDQMQRA----GLQ 268
Y + G + A ++ M E G S V+ N ++ V + +Q G
Sbjct: 233 GYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFF 292
Query: 269 PDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTV 328
PD ++ L+N KA + A+ + + ML G P YN ++ G V +A V
Sbjct: 293 PDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEV 352
Query: 329 FKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAK 388
M CSP+ +Y T++S + +E A + R L G +P+V T+ +LI+G
Sbjct: 353 LDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCL 412
Query: 389 VNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKA 448
N ME++++MR G +P++ + ++D+ D A+ K+ME G
Sbjct: 413 TRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVIT 472
Query: 449 KNILLSLAKTADERNEANELL 469
N L+ A++ EA E+
Sbjct: 473 YNTLIDGFCKANKTREAEEIF 493
>gi|357130476|ref|XP_003566874.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
mitochondrial-like [Brachypodium distachyon]
Length = 810
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 99/383 (25%), Positives = 178/383 (46%), Gaps = 42/383 (10%)
Query: 101 MLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSS 160
+LI + G KA ++ M +G PS + +++ R+K+A +F M S
Sbjct: 337 VLIRGCDQVGMTQKAYELCRQMTGQGLLPSTFELSLVLKGLLNDRRWKDAVCLFEEMADS 396
Query: 161 GPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGY 220
G P TY ++ +A+K +EA +F + +K+ +KP ++ ++ Y K G
Sbjct: 397 G-LPDVFTYNNLIHWHCQAHKLREALNLFDRM---KKAGVKPSINTYNSLLMGYCKKGCM 452
Query: 221 EKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSKIY---DQMQRAGLQPDVVSYALL 277
++A KL++ M G + + VTY +LM K+ Y D+M++ G+ + +Y +L
Sbjct: 453 DEAVKLYSEMPMEGFKPNVVTYITLMRGYIAKKDFDNAYALLDEMKQNGVSCNDYTYNVL 512
Query: 278 INAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMR---- 333
IN R E + + + G PT YN +++ F +GM+ A TV++ MR
Sbjct: 513 INGICMVDRVCEVDGMLKSFMSEGFIPTMMTYNSIINGFVKAGMMGSAFTVYQQMREKGL 572
Query: 334 ---------------RDRCS----------------PDICSYTTMLSAYVNASDMEGAEK 362
R CS PDI +Y +++ + +M A +
Sbjct: 573 PPNIITYTSFIDGYCRTGCSDMALKMLNDVRRRGLQPDIVAYNALINGFCQEGNMSHALQ 632
Query: 363 FFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYG 422
L +DG PN + Y +LI GY +N ++++ + Y+ M GI + + +TT++D +
Sbjct: 633 LLVILLKDGLAPNTVVYNSLITGYKNLNMMKEVSKFYESMIKGGIVADTSTYTTLIDGFS 692
Query: 423 KNKDFDSAVVWYKEMESCGFPPD 445
K+ + A+ Y EM + G+ PD
Sbjct: 693 KDGNVAFALELYSEMMAKGYIPD 715
Score = 139 bits (349), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 84/356 (23%), Positives = 173/356 (48%), Gaps = 6/356 (1%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
L+ Y K+G ++A K+ S M +G+ P+VV++ LM Y + NA A+ M+ +G
Sbjct: 442 LLMGYCKKGCMDEAVKLYSEMPMEGFKPNVVTYITLMRGYIAKKDFDNAYALLDEMKQNG 501
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
+ TY +++ ++ E + + + + E P ++ +I + KAG
Sbjct: 502 VSCNDYTYNVLINGICMVDRVCEVDGMLKSFMSEG---FIPTMMTYNSIINGFVKAGMMG 558
Query: 222 KARKLFALMAERGVQQSTVTYNSLMS--FETNYKEVS-KIYDQMQRAGLQPDVVSYALLI 278
A ++ M E+G+ + +TY S + T +++ K+ + ++R GLQPD+V+Y LI
Sbjct: 559 SAFTVYQQMREKGLPPNIITYTSFIDGYCRTGCSDMALKMLNDVRRRGLQPDIVAYNALI 618
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCS 338
N + + AL + +L G+ P YN L+ + M+ + ++ M +
Sbjct: 619 NGFCQEGNMSHALQLLVILLKDGLAPNTVVYNSLITGYKNLNMMKEVSKFYESMIKGGIV 678
Query: 339 PDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEI 398
D +YTT++ + ++ A + + + G++P+ T+ L G + +++ ++
Sbjct: 679 ADTSTYTTLIDGFSKDGNVAFALELYSEMMAKGYIPDAFTFTALTHGLCRSGDIDGAKKL 738
Query: 399 YDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLS 454
++MR ++PN I+ +++ Y ++ A + EM + G PD +IL+S
Sbjct: 739 LEEMRRLDVRPNVFIYNMLINGYLRDCKLQEAFRLHDEMLNMGIQPDDTTYDILVS 794
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 98/397 (24%), Positives = 173/397 (43%), Gaps = 40/397 (10%)
Query: 113 NKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQII 172
+ A + M +G P + S T L+ RG K+A A+F M+ G R A + +
Sbjct: 139 SAATDTYAHMVARGVVPDIKSRTDLLIRTARGSSAKDALALFMEMRGRGYRVDAWMFDAL 198
Query: 173 LKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAE 232
+ ++ ++A +F + E + PDQ+++ + I K G +A ++ M E
Sbjct: 199 MSACLKEGMHEDAVRLFDEMPGAE---IDPDQRVYALAITALCKLGDGGRALRMLREMKE 255
Query: 233 RGVQQSTVTYNSLMSFETN---YKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEE 289
G TY +++ +E ++ D+M+ AG + DV+ L+ Y +
Sbjct: 256 VGFDTCDFTYRTMVDVLVKTGRMEEALRVNDEMRDAGKKMDVIVATTLMRGYCLRQEVGN 315
Query: 290 ALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQA-------------------RTVFK 330
AL +F+E L G+ PT Y +L+ GM +A V K
Sbjct: 316 ALNLFKETLKDGIVPTKVMYGVLIRGCDQVGMTQKAYELCRQMTGQGLLPSTFELSLVLK 375
Query: 331 CMRRDR------CS---------PDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPN 375
+ DR C PD+ +Y ++ + A + A F R+K+ G P+
Sbjct: 376 GLLNDRRWKDAVCLFEEMADSGLPDVFTYNNLIHWHCQAHKLREALNLFDRMKKAGVKPS 435
Query: 376 VITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYK 435
+ TY +L+ GY K +++ +++Y +M + G KPN + T+M Y KDFD+A
Sbjct: 436 INTYNSLLMGYCKKGCMDEAVKLYSEMPMEGFKPNVVTYITLMRGYIAKKDFDNAYALLD 495
Query: 436 EMESCGFPPDQKAKNILLSLAKTADERNEANELLGNF 472
EM+ G + N+L++ D E + +L +F
Sbjct: 496 EMKQNGVSCNDYTYNVLINGICMVDRVCEVDGMLKSF 532
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 92/394 (23%), Positives = 180/394 (45%), Gaps = 42/394 (10%)
Query: 99 FLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQ 158
+ + ITA K GD +A ++L M + G+ ++ +++ + GR + A + M+
Sbjct: 230 YALAITALCKLGDGGRALRMLREMKEVGFDTCDFTYRTMVDVLVKTGRMEEALRVNDEMR 289
Query: 159 SSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAG 218
+G + + +++ + + A +F L K + P + M+ ++I + G
Sbjct: 290 DAGKKMDVIVATTLMRGYCLRQEVGNALNLFKETL---KDGIVPTKVMYGVLIRGCDQVG 346
Query: 219 GYEKARKLFALMAERGVQQSTVTYNSLMSFETN---YKEVSKIYDQMQRAGLQPDVVSYA 275
+KA +L M +G+ ST + ++ N +K+ ++++M +GL PDV +Y
Sbjct: 347 MTQKAYELCRQMTGQGLLPSTFELSLVLKGLLNDRRWKDAVCLFEEMADSGL-PDVFTYN 405
Query: 276 LLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRD 335
LI+ + +A + EAL +F+ M AGV+P+ YN LL + G +D+A ++ M +
Sbjct: 406 NLIHWHCQAHKLREALNLFDRMKKAGVKPSINTYNSLLMGYCKKGCMDEAVKLYSEMPME 465
Query: 336 RCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDG------------------------ 371
P++ +Y T++ Y+ D + A +KQ+G
Sbjct: 466 GFKPNVVTYITLMRGYIAKKDFDNAYALLDEMKQNGVSCNDYTYNVLINGICMVDRVCEV 525
Query: 372 -----------FVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDA 420
F+P ++TY ++I G+ K + +Y +MR G+ PN +T+ +D
Sbjct: 526 DGMLKSFMSEGFIPTMMTYNSIINGFVKAGMMGSAFTVYQQMREKGLPPNIITYTSFIDG 585
Query: 421 YGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLS 454
Y + D A+ ++ G PD A N L++
Sbjct: 586 YCRTGCSDMALKMLNDVRRRGLQPDIVAYNALIN 619
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 84/370 (22%), Positives = 171/370 (46%), Gaps = 7/370 (1%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
L+ Y + + A + K G P+ V + L+ + G + A + R+M G
Sbjct: 303 LMRGYCLRQEVGNALNLFKETLKDGIVPTKVMYGVLIRGCDQVGMTQKAYELCRQMTGQG 362
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
PS ++LK + ++K+A +F + D PD ++ +I+ + +A
Sbjct: 363 LLPSTFELSLVLKGLLNDRRWKDAVCLFEEMADSGL----PDVFTYNNLIHWHCQAHKLR 418
Query: 222 KARKLFALMAERGVQQSTVTYNSLM---SFETNYKEVSKIYDQMQRAGLQPDVVSYALLI 278
+A LF M + GV+ S TYNSL+ + E K+Y +M G +P+VV+Y L+
Sbjct: 419 EALNLFDRMKKAGVKPSINTYNSLLMGYCKKGCMDEAVKLYSEMPMEGFKPNVVTYITLM 478
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCS 338
Y + + A A+ +EM GV YN+L++ + V + + K +
Sbjct: 479 RGYIAKKDFDNAYALLDEMKQNGVSCNDYTYNVLINGICMVDRVCEVDGMLKSFMSEGFI 538
Query: 339 PDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEI 398
P + +Y ++++ +V A M A ++++++ G PN+ITY + I GY + + +++
Sbjct: 539 PTMMTYNSIINGFVKAGMMGSAFTVYQQMREKGLPPNIITYTSFIDGYCRTGCSDMALKM 598
Query: 399 YDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKT 458
+ +R G++P+ + +++ + + + A+ + G P+ N L++ K
Sbjct: 599 LNDVRRRGLQPDIVAYNALINGFCQEGNMSHALQLLVILLKDGLAPNTVVYNSLITGYKN 658
Query: 459 ADERNEANEL 468
+ E ++
Sbjct: 659 LNMMKEVSKF 668
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 73/284 (25%), Positives = 123/284 (43%), Gaps = 4/284 (1%)
Query: 202 PDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSF---ETNYKEVSKI 258
PD K ++ + + A LF M RG + +++LMS E +++ ++
Sbjct: 155 PDIKSRTDLLIRTARGSSAKDALALFMEMRGRGYRVDAWMFDALMSACLKEGMHEDAVRL 214
Query: 259 YDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAI 318
+D+M A + PD YAL I A K AL + EM + G Y ++D
Sbjct: 215 FDEMPGAEIDPDQRVYALAITALCKLGDGGRALRMLREMKEVGFDTCDFTYRTMVDVLVK 274
Query: 319 SGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVIT 378
+G +++A V MR D+ TT++ Y ++ A F+ +DG VP +
Sbjct: 275 TGRMEEALRVNDEMRDAGKKMDVIVATTLMRGYCLRQEVGNALNLFKETLKDGIVPTKVM 334
Query: 379 YGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEME 438
YG LI+G +V +K E+ +M G+ P+ + ++ ++ + AV ++EM
Sbjct: 335 YGVLIRGCDQVGMTQKAYELCRQMTGQGLLPSTFELSLVLKGLLNDRRWKDAVCLFEEMA 394
Query: 439 SCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGIN 482
G PD N L+ A + EA L +P IN
Sbjct: 395 DSGL-PDVFTYNNLIHWHCQAHKLREALNLFDRMKKAGVKPSIN 437
Score = 45.8 bits (107), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 35/155 (22%), Positives = 69/155 (44%), Gaps = 7/155 (4%)
Query: 59 PKDLVLGTLVRLKQLKKWNVVSEVLEWLR--IQSWWDFNEMDFLMLITAYGKQGDFNKAE 116
P +V +L+ K N++ EV ++ I+ + + LI + K G+ A
Sbjct: 644 PNTVVYNSLI--TGYKNLNMMKEVSKFYESMIKGGIVADTSTYTTLIDGFSKDGNVAFAL 701
Query: 117 KVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLF 176
++ S M KGY P + TAL R G A+ + M+ RP+ Y +++ +
Sbjct: 702 ELYSEMMAKGYIPDAFTFTALTHGLCRSGDIDGAKKLLEEMRRLDVRPNVFIYNMLINGY 761
Query: 177 VEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMI 211
+ K +EA + +L+ ++PD + +++
Sbjct: 762 LRDCKLQEAFRLHDEMLNMG---IQPDDTTYDILV 793
>gi|225464790|ref|XP_002268064.1| PREDICTED: pentatricopeptide repeat-containing protein At2g26790,
mitochondrial [Vitis vinifera]
Length = 817
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 95/374 (25%), Positives = 183/374 (48%), Gaps = 25/374 (6%)
Query: 97 MDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRR 156
+ + LI Y QG A+ + M ++G P +V++ L+ + R G K A +
Sbjct: 438 VHYTTLIAGYCLQGKLVDAKNMFEEMKERGIEPDIVTYNILVGGFSRNGLKKEALELLDC 497
Query: 157 MQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKK 216
+ + G +P++ T+ I++ A K KEAE TL D+ + + M+ Y K
Sbjct: 498 IGTQGLKPNSATHNRIIEGLCMAGKVKEAEAFLNTLEDK-------CLENYSAMVDGYCK 550
Query: 217 AGGYEKARKLFALMAERGV---QQSTVTYNSLMSFETNYKEVSKIYDQMQRAGLQPDVVS 273
A KA +LF+ ++++G+ ++S S + E Y + + ++M ++P+ +
Sbjct: 551 ANFTRKAYELFSRLSKQGILVKKKSCFKLLSSLCMEGEYDKALILLERMLALDVEPNQIM 610
Query: 274 YALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMR 333
Y LI A+ + + A VF+ +++ G+ P Y ++++ + + +AR +F M+
Sbjct: 611 YGKLIGAFCRDGDMKRAQLVFDMLVERGITPDVITYTMMINGYCRVNCLREARDIFNDMK 670
Query: 334 RDRCSPDICSYTTMLSAY--VN---ASDME---GAEK-------FFRRLKQDGFVPNVIT 378
PD+ +YT +L + VN A ++ G+E+ F+ +K+ G P+V+
Sbjct: 671 ERGIKPDVITYTVVLDGHSKVNLKMARSLQFSKGSEEEKMDASPFWSEMKEMGIKPDVVC 730
Query: 379 YGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEME 438
Y LI + K NNL+ + +YD+M G++P+ +T ++ + D D A+ EM
Sbjct: 731 YTVLIDSHCKTNNLQDAINLYDEMIARGLQPDIVTYTALLSSCCSRGDMDRAITLVNEMS 790
Query: 439 SCGFPPDQKAKNIL 452
G PD +A ++L
Sbjct: 791 FKGIEPDSRAMSVL 804
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 94/357 (26%), Positives = 157/357 (43%), Gaps = 39/357 (10%)
Query: 101 MLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSS 160
ML+ AY + G F++A L ++G+ P ++S LM G+ A AI+R ++
Sbjct: 162 MLVKAYVRVGMFDEAIDALFQTKRRGFVPHIMSCNFLMNRLIEHGKIDMAVAIYRHLKRL 221
Query: 161 GPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAG-G 219
G P+ TY I +K F+EA +VF + + +P + + +K++ G
Sbjct: 222 GLNPNDYTYGIFIKALCRKGNFEEAVDVFREMEEAGVNPNAVTCSTYIEGLCSHKRSDLG 281
Query: 220 YEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSKIYDQMQRAGLQPDVVSYALLIN 279
YE R L A T S E KE ++ M G+ PD Y LI+
Sbjct: 282 YEALRALRAANWPIDTFAYTAVIRGFCS-EMKLKEAEDVFIDMVNEGIAPDGYIYGALIH 340
Query: 280 AYGKARREEEALAV-----------------------------------FEEMLDAGVRP 304
AY KA +A+A+ F+E D+G+
Sbjct: 341 AYCKAGNLLQAVALHNDMVSNGIKTNCVIVSSILQCLCEMGMASEVVDQFKEFRDSGIFL 400
Query: 305 THKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFF 364
YNI++DA G V++A + M+ R S D+ YTT+++ Y + A+ F
Sbjct: 401 DEVLYNIVVDALCKLGKVEEAVELLNEMKGRRMSLDVVHYTTLIAGYCLQGKLVDAKNMF 460
Query: 365 RRLKQDGFVPNVITYGTLIKGYAKVNNLEK-MMEIYDKMRVNGIKPNQTIFTTIMDA 420
+K+ G P+++TY L+ G+++ N L+K +E+ D + G+KPN I++
Sbjct: 461 EEMKERGIEPDIVTYNILVGGFSR-NGLKKEALELLDCIGTQGLKPNSATHNRIIEG 516
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 122/507 (24%), Positives = 206/507 (40%), Gaps = 87/507 (17%)
Query: 44 AVAVLRSERTRGQPLPKDLVLGTLVR-LKQLKKWNVVSEVLEWLRIQSWWDFNEMDFLML 102
AV V R G P + T + L K+ ++ E L LR +W + + +
Sbjct: 246 AVDVFREMEEAGVN-PNAVTCSTYIEGLCSHKRSDLGYEALRALRAANW-PIDTFAYTAV 303
Query: 103 ITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGP 162
I + + +AE V M +G AP + AL+ AY + G A A+ M S+G
Sbjct: 304 IRGFCSEMKLKEAEDVFIDMVNEGIAPDGYIYGALIHAYCKAGNLLQAVALHNDMVSNGI 363
Query: 163 RPSALTYQIILKLFVE-------ANKFKE-------AEEVF-----------------MT 191
+ + + IL+ E ++FKE +EV +
Sbjct: 364 KTNCVIVSSILQCLCEMGMASEVVDQFKEFRDSGIFLDEVLYNIVVDALCKLGKVEEAVE 423
Query: 192 LLDEEKSP-LKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMS-FE 249
LL+E K + D + +I Y G A+ +F M ERG++ VTYN L+ F
Sbjct: 424 LLNEMKGRRMSLDVVHYTTLIAGYCLQGKLVDAKNMFEEMKERGIEPDIVTYNILVGGFS 483
Query: 250 TN--YKEVSKIYDQMQRAGLQPDVVS-------------------------------YAL 276
N KE ++ D + GL+P+ + Y+
Sbjct: 484 RNGLKKEALELLDCIGTQGLKPNSATHNRIIEGLCMAGKVKEAEAFLNTLEDKCLENYSA 543
Query: 277 LINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDR 336
+++ Y KA +A +F + G+ K+ LL + + G D+A + + M
Sbjct: 544 MVDGYCKANFTRKAYELFSRLSKQGILVKKKSCFKLLSSLCMEGEYDKALILLERMLALD 603
Query: 337 CSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMM 396
P+ Y ++ A+ DM+ A+ F L + G P+VITY +I GY +VN L +
Sbjct: 604 VEPNQIMYGKLIGAFCRDGDMKRAQLVFDMLVERGITPDVITYTMMINGYCRVNCLREAR 663
Query: 397 EIYDKMRVNGIKPNQTIFTTIMDAYGK----------------NKDFDSAVVWYKEMESC 440
+I++ M+ GIKP+ +T ++D + K + D++ W EM+
Sbjct: 664 DIFNDMKERGIKPDVITYTVVLDGHSKVNLKMARSLQFSKGSEEEKMDASPFW-SEMKEM 722
Query: 441 GFPPDQKAKNILL-SLAKTADERNEAN 466
G PD +L+ S KT + ++ N
Sbjct: 723 GIKPDVVCYTVLIDSHCKTNNLQDAIN 749
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 85/390 (21%), Positives = 168/390 (43%), Gaps = 45/390 (11%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N+ + + I A ++G+F +A V M + G P+ V+ + +E R
Sbjct: 226 NDYTYGIFIKALCRKGNFEEAVDVFREMEEAGVNPNAVTCSTYIEGLCSHKRSDLGYEAL 285
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
R ++++ Y +++ F K KEAE+VF+ +++E + PD ++ +I+ Y
Sbjct: 286 RALRAANWPIDTFAYTAVIRGFCSEMKLKEAEDVFIDMVNE---GIAPDGYIYGALIHAY 342
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSKIYDQMQR---AGLQPDV 271
KAG +A L M G++ + V +S++ S++ DQ + +G+ D
Sbjct: 343 CKAGNLLQAVALHNDMVSNGIKTNCVIVSSILQCLCEMGMASEVVDQFKEFRDSGIFLDE 402
Query: 272 VSYALLINAYGKARREEEALAV-----------------------------------FEE 296
V Y ++++A K + EEA+ + FEE
Sbjct: 403 VLYNIVVDALCKLGKVEEAVELLNEMKGRRMSLDVVHYTTLIAGYCLQGKLVDAKNMFEE 462
Query: 297 MLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASD 356
M + G+ P YNIL+ F+ +G+ +A + C+ P+ ++ ++ A
Sbjct: 463 MKERGIEPDIVTYNILVGGFSRNGLKKEALELLDCIGTQGLKPNSATHNRIIEGLCMAGK 522
Query: 357 MEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTT 416
++ AE F L +D + N Y ++ GY K N K E++ ++ GI +
Sbjct: 523 VKEAEAFLNTL-EDKCLEN---YSAMVDGYCKANFTRKAYELFSRLSKQGILVKKKSCFK 578
Query: 417 IMDAYGKNKDFDSAVVWYKEMESCGFPPDQ 446
++ + ++D A++ + M + P+Q
Sbjct: 579 LLSSLCMEGEYDKALILLERMLALDVEPNQ 608
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 67/264 (25%), Positives = 116/264 (43%), Gaps = 3/264 (1%)
Query: 209 MMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVS---KIYDQMQRA 265
M++ Y + G +++A RG ++ N LM+ + ++ IY ++R
Sbjct: 162 MLVKAYVRVGMFDEAIDALFQTKRRGFVPHIMSCNFLMNRLIEHGKIDMAVAIYRHLKRL 221
Query: 266 GLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQA 325
GL P+ +Y + I A + EEA+ VF EM +AGV P + ++ D
Sbjct: 222 GLNPNDYTYGIFIKALCRKGNFEEAVDVFREMEEAGVNPNAVTCSTYIEGLCSHKRSDLG 281
Query: 326 RTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKG 385
+ +R D +YT ++ + + ++ AE F + +G P+ YG LI
Sbjct: 282 YEALRALRAANWPIDTFAYTAVIRGFCSEMKLKEAEDVFIDMVNEGIAPDGYIYGALIHA 341
Query: 386 YAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPD 445
Y K NL + + +++ M NGIK N I ++I+ + V +KE G D
Sbjct: 342 YCKAGNLLQAVALHNDMVSNGIKTNCVIVSSILQCLCEMGMASEVVDQFKEFRDSGIFLD 401
Query: 446 QKAKNILLSLAKTADERNEANELL 469
+ NI++ + EA ELL
Sbjct: 402 EVLYNIVVDALCKLGKVEEAVELL 425
Score = 92.4 bits (228), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 73/343 (21%), Positives = 148/343 (43%), Gaps = 54/343 (15%)
Query: 101 MLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSS 160
+L+ + + G +A ++L + +G P+ +H ++E G+ K AEA ++
Sbjct: 477 ILVGGFSRNGLKKEALELLDCIGTQGLKPNSATHNRIIEGLCMAGKVKEAEAFLNTLEDK 536
Query: 161 GPRPSALTYQIILKLFVEANKFKEAEEVFMTL-----LDEEKSPLK-------------- 201
Y ++ + +AN ++A E+F L L ++KS K
Sbjct: 537 CLE----NYSAMVDGYCKANFTRKAYELFSRLSKQGILVKKKSCFKLLSSLCMEGEYDKA 592
Query: 202 -------------PDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSF 248
P+Q M+ +I + + G ++A+ +F ++ ERG+ +TY +++
Sbjct: 593 LILLERMLALDVEPNQIMYGKLIGAFCRDGDMKRAQLVFDMLVERGITPDVITYTMMING 652
Query: 249 ETN---YKEVSKIYDQMQRAGLQPDVVSYALLINAYGKAR------------REEE---A 290
+E I++ M+ G++PDV++Y ++++ + K EEE A
Sbjct: 653 YCRVNCLREARDIFNDMKERGIKPDVITYTVVLDGHSKVNLKMARSLQFSKGSEEEKMDA 712
Query: 291 LAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSA 350
+ EM + G++P Y +L+D+ + + A ++ M PDI +YT +LS+
Sbjct: 713 SPFWSEMKEMGIKPDVVCYTVLIDSHCKTNNLQDAINLYDEMIARGLQPDIVTYTALLSS 772
Query: 351 YVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLE 393
+ DM+ A + G P+ L +G K ++
Sbjct: 773 CCSRGDMDRAITLVNEMSFKGIEPDSRAMSVLHRGILKARKVQ 815
>gi|115469638|ref|NP_001058418.1| Os06g0690900 [Oryza sativa Japonica Group]
gi|52076717|dbj|BAD45630.1| putative fertility restorer [Oryza sativa Japonica Group]
gi|53793285|dbj|BAD54507.1| putative fertility restorer [Oryza sativa Japonica Group]
gi|113596458|dbj|BAF20332.1| Os06g0690900 [Oryza sativa Japonica Group]
Length = 991
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 101/410 (24%), Positives = 179/410 (43%), Gaps = 53/410 (12%)
Query: 92 WDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAE 151
W +N + + ++ K +KA +L+ M K G P+V+++T L++ + NA
Sbjct: 498 WTYNSLMYGLV-----KDKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQCDEHDFDNAF 552
Query: 152 AIFRRMQSSGPRPSALTYQIILKLFVEANKFKEA-----------EEVFMTLLDEEKSP- 199
+F M+ +G +P Y ++ +A + +EA +V+ T L + S
Sbjct: 553 RLFEMMEQNGLKPDEHAYAVLTDALCKAGRAEEAYSFIVRKGVALTKVYYTTLIDGFSKA 612
Query: 200 -----------------LKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTY 242
PD + ++++ K +A + M+ RG++ + Y
Sbjct: 613 GNTDFAATLIERMIDEGCTPDSYTYSVLLHALCKQKRLNEALPILDQMSLRGIKCTIFAY 672
Query: 243 NSL---MSFETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLD 299
L M E + ++Y++M +G +P +Y + IN+Y K R E+A + +M
Sbjct: 673 TILIDEMLREGKHDHAKRMYNEMTSSGHKPSATTYTVFINSYCKEGRLEDAEDLILKMER 732
Query: 300 AGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLS-------AYV 352
GV P YNIL+D G +D+A + K M C P+ +Y +L AYV
Sbjct: 733 EGVAPDVVTYNILIDGCGHMGYIDRAFSTLKRMVGASCEPNYWTYCLLLKHLLKGNLAYV 792
Query: 353 NASDMEG---------AEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMR 403
+ D G + R+ + G P V TY +LI G+ K LE+ + D M
Sbjct: 793 RSVDTSGMWNLIELDITWQLLERMVKHGLNPTVTTYSSLIAGFCKAGRLEEACLLLDHMC 852
Query: 404 VNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILL 453
G+ PN+ I+T ++ K F+ A+ + M CGF P ++ +L+
Sbjct: 853 GKGLSPNEDIYTLLIKCCCDTKFFEKALSFVSIMSECGFQPQLESYRLLV 902
Score = 138 bits (348), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 95/401 (23%), Positives = 182/401 (45%), Gaps = 40/401 (9%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
+I +Y K+GD A + + + G P + AL+ Y R G + A +F M G
Sbjct: 189 MIKSYCKEGDLTTAHRYFRLLLEGGLEPETFTCNALVLGYCRTGELRKACWLFLMMPLMG 248
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
+ + +Y I+++ +A ++A +F+ + ++ P+ + F +I K+G
Sbjct: 249 CQRNEYSYTILIQGLCDAKCVRKALVLFLMM---KRDGCSPNVRAFTFLISGLCKSGRVG 305
Query: 222 KARKLFALMAERGVQQSTVTYNSLMSFETNYKEVS---KIYDQMQRAGLQPD-------- 270
AR LF M + GV S +TYN+++ + ++ KI + M++ G PD
Sbjct: 306 DARLLFDAMPQNGVVPSVMTYNAMIVGYSKLGRMNDALKIKELMEKNGCHPDDWTYNTLI 365
Query: 271 --------------------------VVSYALLINAYGKARREEEALAVFEEMLDAGVRP 304
VV++ LIN Y A + ++AL + +M+ + +
Sbjct: 366 YGLCDQKTEEAEELLNNAVKEGFTPTVVTFTNLINGYCMAEKFDDALRMKNKMMSSKCKL 425
Query: 305 THKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFF 364
+ + L+++ + +A+ + + + P++ +YT+++ Y + ++ A +
Sbjct: 426 DLQVFGKLINSLIKKDRLKEAKELLNEISANGLVPNVITYTSIIDGYCKSGKVDIALEVL 485
Query: 365 RRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKN 424
+ +++DG PN TY +L+ G K L K M + KM+ +GI PN +TT++
Sbjct: 486 KMMERDGCQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQCDE 545
Query: 425 KDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEA 465
DFD+A ++ ME G PD+ A +L A EA
Sbjct: 546 HDFDNAFRLFEMMEQNGLKPDEHAYAVLTDALCKAGRAEEA 586
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 101/431 (23%), Positives = 187/431 (43%), Gaps = 39/431 (9%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
NE + +LI KA + M + G +P+V + T L+ + GR +A +F
Sbjct: 252 NEYSYTILIQGLCDAKCVRKALVLFLMMKRDGCSPNVRAFTFLISGLCKSGRVGDARLLF 311
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
M +G PS +TY ++ + + + +A ++ + EK+ PD ++ +IY
Sbjct: 312 DAMPQNGVVPSVMTYNAMIVGYSKLGRMNDALKIKELM---EKNGCHPDDWTYNTLIYGL 368
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSLM---SFETNYKEVSKIYDQMQRAGLQPDV 271
E+A +L + G + VT+ +L+ + + ++ ++M + + D+
Sbjct: 369 CDQKT-EEAEELLNNAVKEGFTPTVVTFTNLINGYCMAEKFDDALRMKNKMMSSKCKLDL 427
Query: 272 VSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKC 331
+ LIN+ K R +EA + E+ G+ P Y ++D + SG VD A V K
Sbjct: 428 QVFGKLINSLIKKDRLKEAKELLNEISANGLVPNVITYTSIIDGYCKSGKVDIALEVLKM 487
Query: 332 MRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNN 391
M RD C P+ +Y +++ V + A ++++DG +PNVITY TL++G ++
Sbjct: 488 MERDGCQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQCDEHD 547
Query: 392 LEKMMEIYDKMRVNGIKPNQ--------------------------------TIFTTIMD 419
+ +++ M NG+KP++ +TT++D
Sbjct: 548 FDNAFRLFEMMEQNGLKPDEHAYAVLTDALCKAGRAEEAYSFIVRKGVALTKVYYTTLID 607
Query: 420 AYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEP 479
+ K + D A + M G PD ++LL NEA +L + +
Sbjct: 608 GFSKAGNTDFAATLIERMIDEGCTPDSYTYSVLLHALCKQKRLNEALPILDQMSLRGIKC 667
Query: 480 GINGLSISVDE 490
I +I +DE
Sbjct: 668 TIFAYTILIDE 678
Score = 134 bits (338), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 87/347 (25%), Positives = 167/347 (48%), Gaps = 14/347 (4%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + + +I Y K G + A +VL M + G P+ ++ +LM + + A A+
Sbjct: 461 NVITYTSIIDGYCKSGKVDIALEVLKMMERDGCQPNAWTYNSLMYGLVKDKKLHKAMALL 520
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
+MQ G P+ +TY +L+ + + F A +F + E++ LKPD+ + ++
Sbjct: 521 TKMQKDGIIPNVITYTTLLQGQCDEHDFDNAFRLFEMM---EQNGLKPDEHAYAVLTDAL 577
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSLM---SFETNYKEVSKIYDQMQRAGLQPDV 271
KAG E+A ++ + +GV + V Y +L+ S N + + ++M G PD
Sbjct: 578 CKAGRAEEA---YSFIVRKGVALTKVYYTTLIDGFSKAGNTDFAATLIERMIDEGCTPDS 634
Query: 272 VSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKC 331
+Y++L++A K +R EAL + ++M G++ T AY IL+D G D A+ ++
Sbjct: 635 YTYSVLLHALCKQKRLNEALPILDQMSLRGIKCTIFAYTILIDEMLREGKHDHAKRMYNE 694
Query: 332 MRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNN 391
M P +YT +++Y +E AE +++++G P+V+TY LI G +
Sbjct: 695 MTSSGHKPSATTYTVFINSYCKEGRLEDAEDLILKMEREGVAPDVVTYNILIDGCGHMGY 754
Query: 392 LEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKN-----KDFDSAVVW 433
+++ +M +PN + ++ K + D++ +W
Sbjct: 755 IDRAFSTLKRMVGASCEPNYWTYCLLLKHLLKGNLAYVRSVDTSGMW 801
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 95/380 (25%), Positives = 176/380 (46%), Gaps = 11/380 (2%)
Query: 114 KAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIIL 173
+AE++L+ K+G+ P+VV+ T L+ Y ++ +A + +M SS + + ++
Sbjct: 375 EAEELLNNAVKEGFTPTVVTFTNLINGYCMAEKFDDALRMKNKMMSSKCKLDLQVFGKLI 434
Query: 174 KLFVEANKFKEAEEVFMTLLDE-EKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAE 232
++ ++ KEA+E LL+E + L P+ + +I Y K+G + A ++ +M
Sbjct: 435 NSLIKKDRLKEAKE----LLNEISANGLVPNVITYTSIIDGYCKSGKVDIALEVLKMMER 490
Query: 233 RGVQQSTVTYNSLMSFETNYKEVSK---IYDQMQRAGLQPDVVSYALLINAYGKARREEE 289
G Q + TYNSLM K++ K + +MQ+ G+ P+V++Y L+ +
Sbjct: 491 DGCQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQCDEHDFDN 550
Query: 290 ALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLS 349
A +FE M G++P AY +L DA +G ++A + + R + YTT++
Sbjct: 551 AFRLFEMMEQNGLKPDEHAYAVLTDALCKAGRAEEA---YSFIVRKGVALTKVYYTTLID 607
Query: 350 AYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKP 409
+ A + + A R+ +G P+ TY L+ K L + + I D+M + GIK
Sbjct: 608 GFSKAGNTDFAATLIERMIDEGCTPDSYTYSVLLHALCKQKRLNEALPILDQMSLRGIKC 667
Query: 410 NQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELL 469
+T ++D + D A Y EM S G P + ++ +A +L+
Sbjct: 668 TIFAYTILIDEMLREGKHDHAKRMYNEMTSSGHKPSATTYTVFINSYCKEGRLEDAEDLI 727
Query: 470 GNFNHPNNEPGINGLSISVD 489
P + +I +D
Sbjct: 728 LKMEREGVAPDVVTYNILID 747
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 90/384 (23%), Positives = 166/384 (43%), Gaps = 42/384 (10%)
Query: 153 IFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIY 212
++ ++ G P +TY ++K + + A F LL+ L+P+ + ++
Sbjct: 170 VYSQLVQDGLLPDTVTYNTMIKSYCKEGDLTTAHRYFRLLLE---GGLEPETFTCNALVL 226
Query: 213 MYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSK---IYDQMQRAGLQP 269
Y + G KA LF +M G Q++ +Y L+ + K V K ++ M+R G P
Sbjct: 227 GYCRTGELRKACWLFLMMPLMGCQRNEYSYTILIQGLCDAKCVRKALVLFLMMKRDGCSP 286
Query: 270 DVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVF 329
+V ++ LI+ K+ R +A +F+ M GV P+ YN ++ ++ G ++ A +
Sbjct: 287 NVRAFTFLISGLCKSGRVGDARLLFDAMPQNGVVPSVMTYNAMIVGYSKLGRMNDALKIK 346
Query: 330 KCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYA-- 387
+ M ++ C PD +Y T++ + E AE+ ++GF P V+T+ LI GY
Sbjct: 347 ELMEKNGCHPDDWTYNTLIYGLCD-QKTEEAEELLNNAVKEGFTPTVVTFTNLINGYCMA 405
Query: 388 ---------------------------------KVNNLEKMMEIYDKMRVNGIKPNQTIF 414
K + L++ E+ +++ NG+ PN +
Sbjct: 406 EKFDDALRMKNKMMSSKCKLDLQVFGKLINSLIKKDRLKEAKELLNEISANGLVPNVITY 465
Query: 415 TTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNH 474
T+I+D Y K+ D A+ K ME G P+ N L+ + ++A LL
Sbjct: 466 TSIIDGYCKSGKVDIALEVLKMMERDGCQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQK 525
Query: 475 PNNEPGINGLSISVDEEDDDDDDD 498
P + + + + D+ D D
Sbjct: 526 DGIIPNVITYTTLLQGQCDEHDFD 549
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 80/353 (22%), Positives = 155/353 (43%), Gaps = 5/353 (1%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
LI + K+ +A+++L+ ++ G P+V+++T++++ Y + G+ A + + M+ G
Sbjct: 433 LINSLIKKDRLKEAKELLNEISANGLVPNVITYTSIIDGYCKSGKVDIALEVLKMMERDG 492
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDE-EKSPLKPDQKMFHMMIYMYKKAGGY 220
+P+A TY ++ V+ K +A M LL + +K + P+ + ++ +
Sbjct: 493 CQPNAWTYNSLMYGLVKDKKLHKA----MALLTKMQKDGIIPNVITYTTLLQGQCDEHDF 548
Query: 221 EKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSKIYDQMQRAGLQPDVVSYALLINA 280
+ A +LF +M + G++ Y L + Y + R G+ V Y LI+
Sbjct: 549 DNAFRLFEMMEQNGLKPDEHAYAVLTDALCKAGRAEEAYSFIVRKGVALTKVYYTTLIDG 608
Query: 281 YGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPD 340
+ KA + A + E M+D G P Y++LL A +++A + M
Sbjct: 609 FSKAGNTDFAATLIERMIDEGCTPDSYTYSVLLHALCKQKRLNEALPILDQMSLRGIKCT 668
Query: 341 ICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYD 400
I +YT ++ + + A++ + + G P+ TY I Y K LE ++
Sbjct: 669 IFAYTILIDEMLREGKHDHAKRMYNEMTSSGHKPSATTYTVFINSYCKEGRLEDAEDLIL 728
Query: 401 KMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILL 453
KM G+ P+ + ++D G D A K M P+ +LL
Sbjct: 729 KMEREGVAPDVVTYNILIDGCGHMGYIDRAFSTLKRMVGASCEPNYWTYCLLL 781
Score = 108 bits (270), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 85/378 (22%), Positives = 162/378 (42%), Gaps = 27/378 (7%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
+E + +L A K G +AE+ SF+ +KG A + V +T L++ + + G A +
Sbjct: 566 DEHAYAVLTDALCKAG---RAEEAYSFIVRKGVALTKVYYTTLIDGFSKAGNTDFAATLI 622
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDE-EKSPLKPDQKMFHMMIYM 213
RM G P + TY ++L + + EA + +LD+ +K + ++I
Sbjct: 623 ERMIDEGCTPDSYTYSVLLHALCKQKRLNEA----LPILDQMSLRGIKCTIFAYTILIDE 678
Query: 214 YKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSF---ETNYKEVSKIYDQMQRAGLQPD 270
+ G ++ A++++ M G + S TY ++ E ++ + +M+R G+ PD
Sbjct: 679 MLREGKHDHAKRMYNEMTSSGHKPSATTYTVFINSYCKEGRLEDAEDLILKMEREGVAPD 738
Query: 271 VVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFA-----------IS 319
VV+Y +LI+ G + A + + M+ A P + Y +LL S
Sbjct: 739 VVTYNILIDGCGHMGYIDRAFSTLKRMVGASCEPNYWTYCLLLKHLLKGNLAYVRSVDTS 798
Query: 320 GM-----VDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVP 374
GM +D + + M + +P + +Y+++++ + A +E A + G P
Sbjct: 799 GMWNLIELDITWQLLERMVKHGLNPTVTTYSSLIAGFCKAGRLEEACLLLDHMCGKGLSP 858
Query: 375 NVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWY 434
N Y LIK EK + M G +P + ++ DF+ +
Sbjct: 859 NEDIYTLLIKCCCDTKFFEKALSFVSIMSECGFQPQLESYRLLVVGLCNEGDFEKVKSLF 918
Query: 435 KEMESCGFPPDQKAKNIL 452
++ G+ D+ A IL
Sbjct: 919 CDLLELGYNHDEVAWKIL 936
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 76/323 (23%), Positives = 149/323 (46%), Gaps = 25/323 (7%)
Query: 101 MLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSS 160
+L+ A KQ N+A +L M+ +G ++ ++T L++ R G++ +A+ ++ M SS
Sbjct: 639 VLLHALCKQKRLNEALPILDQMSLRGIKCTIFAYTILIDEMLREGKHDHAKRMYNEMTSS 698
Query: 161 GPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGY 220
G +PSA TY + + + + + ++AE++ +L E+ + PD ++++I G
Sbjct: 699 GHKPSATTYTVFINSYCKEGRLEDAEDL---ILKMEREGVAPDVVTYNILIDGCGHMGYI 755
Query: 221 EKARKLFALMAERGVQQSTVTYNSLM------------SFET----NYKEVS---KIYDQ 261
++A M + + TY L+ S +T N E+ ++ ++
Sbjct: 756 DRAFSTLKRMVGASCEPNYWTYCLLLKHLLKGNLAYVRSVDTSGMWNLIELDITWQLLER 815
Query: 262 MQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGM 321
M + GL P V +Y+ LI + KA R EEA + + M G+ P Y +L+ +
Sbjct: 816 MVKHGLNPTVTTYSSLIAGFCKAGRLEEACLLLDHMCGKGLSPNEDIYTLLIKCCCDTKF 875
Query: 322 VDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGT 381
++A + M P + SY ++ N D E + F L + G+ + + +
Sbjct: 876 FEKALSFVSIMSECGFQPQLESYRLLVVGLCNEGDFEKVKSLFCDLLELGYNHDEVAWKI 935
Query: 382 LIKGYAKVNNLE---KMMEIYDK 401
L G K ++ +M+ I +K
Sbjct: 936 LNDGLLKAGYVDICFQMLSIMEK 958
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 100/218 (45%), Gaps = 3/218 (1%)
Query: 255 VSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLD 314
+ ++Y Q+ + GL PD V+Y +I +Y K A F +L+ G+ P N L+
Sbjct: 167 MGRVYSQLVQDGLLPDTVTYNTMIKSYCKEGDLTTAHRYFRLLLEGGLEPETFTCNALVL 226
Query: 315 AFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVP 374
+ +G + +A +F M C + SYT ++ +A + A F +K+DG P
Sbjct: 227 GYCRTGELRKACWLFLMMPLMGCQRNEYSYTILIQGLCDAKCVRKALVLFLMMKRDGCSP 286
Query: 375 NVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWY 434
NV + LI G K + ++D M NG+ P+ + ++ Y K + A+
Sbjct: 287 NVRAFTFLISGLCKSGRVGDARLLFDAMPQNGVVPSVMTYNAMIVGYSKLGRMNDALKIK 346
Query: 435 KEMESCGFPPDQKAKNILLSLAKTADERN-EANELLGN 471
+ ME G PD N L+ D++ EA ELL N
Sbjct: 347 ELMEKNGCHPDDWTYNTLIY--GLCDQKTEEAEELLNN 382
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 63/256 (24%), Positives = 106/256 (41%), Gaps = 16/256 (6%)
Query: 99 FLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQ 158
+ + I +Y K+G AE ++ M ++G AP VV++ L++ G G A + +RM
Sbjct: 707 YTVFINSYCKEGRLEDAEDLILKMEREGVAPDVVTYNILIDGCGHMGYIDRAFSTLKRMV 766
Query: 159 SSGPRPSALTYQIILKLFVEAN-------------KFKEAEEVFMTLLDEEKSPLKPDQK 205
+ P+ TY ++LK ++ N E + + L K L P
Sbjct: 767 GASCEPNYWTYCLLLKHLLKGNLAYVRSVDTSGMWNLIELDITWQLLERMVKHGLNPTVT 826
Query: 206 MFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSK---IYDQM 262
+ +I + KAG E+A L M +G+ + Y L+ + K K M
Sbjct: 827 TYSSLIAGFCKAGRLEEACLLLDHMCGKGLSPNEDIYTLLIKCCCDTKFFEKALSFVSIM 886
Query: 263 QRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMV 322
G QP + SY LL+ E+ ++F ++L+ G A+ IL D +G V
Sbjct: 887 SECGFQPQLESYRLLVVGLCNEGDFEKVKSLFCDLLELGYNHDEVAWKILNDGLLKAGYV 946
Query: 323 DQARTVFKCMRRDRCS 338
D + M + C
Sbjct: 947 DICFQMLSIMEKRYCC 962
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 75/170 (44%)
Query: 285 RREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSY 344
R +A+ A + + K YN L + A M + V+ + +D PD +Y
Sbjct: 127 RVSADAIQAIRRTGSARLALSPKCYNFALRSLARFDMTEYMGRVYSQLVQDGLLPDTVTY 186
Query: 345 TTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRV 404
TM+ +Y D+ A ++FR L + G P T L+ GY + L K ++ M +
Sbjct: 187 NTMIKSYCKEGDLTTAHRYFRLLLEGGLEPETFTCNALVLGYCRTGELRKACWLFLMMPL 246
Query: 405 NGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLS 454
G + N+ +T ++ K A+V + M+ G P+ +A L+S
Sbjct: 247 MGCQRNEYSYTILIQGLCDAKCVRKALVLFLMMKRDGCSPNVRAFTFLIS 296
>gi|254939549|ref|NP_001157212.1| pentatricopeptide repeat10 [Zea mays]
gi|218684531|gb|ACL01094.1| chloroplast pentatricopeptide repeat protein 10 [Zea mays]
gi|223948163|gb|ACN28165.1| unknown [Zea mays]
gi|413943497|gb|AFW76146.1| pentatricopeptide repeat10 [Zea mays]
Length = 786
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 99/412 (24%), Positives = 189/412 (45%), Gaps = 16/412 (3%)
Query: 76 WNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPS----V 131
W +L W + D + ++ M++ A G++G + + V + +++ P V
Sbjct: 120 WEWALALLRWAGKEGAADASALE--MVVRALGREG---QHDAVCALLDETPLPPGSRLDV 174
Query: 132 VSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMT 191
++T ++ A R GRY+ A +F ++ G P+ +TY ++L ++ + + +
Sbjct: 175 RAYTTVLHALSRAGRYERALELFAELRRQGVAPTLVTYNVVLDVY---GRMGRSWPRIVA 231
Query: 192 LLDEEKSP-LKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSF-- 248
LLDE ++ ++PD +I + G ++A F + RG VTYN+L+
Sbjct: 232 LLDEMRAAGVEPDGFTASTVIAACCRDGLVDEAVAFFEDLKARGHAPCVVTYNALLQVFG 291
Query: 249 -ETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHK 307
NY E ++ +M++ G QPD V+Y L Y +A EEA + M G+ P
Sbjct: 292 KAGNYTEALRVLGEMEQNGCQPDAVTYNELAGTYARAGFFEEAARCLDTMASKGLLPNAF 351
Query: 308 AYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRL 367
YN ++ A+ G VD+A +F M++ P++ +Y +L S + +
Sbjct: 352 TYNTVMTAYGNVGKVDEALALFDQMKKTGFVPNVNTYNLVLGMLGKKSRFTVMLEMLGEM 411
Query: 368 KQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDF 427
+ G PN +T+ T++ K + + + + MR G++ ++ + T++ AYG+
Sbjct: 412 SRSGCTPNRVTWNTMLAVCGKRGMEDYVTRVLEGMRSCGVELSRDTYNTLIAAYGRCGSR 471
Query: 428 DSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEP 479
+A Y EM S GF P N LL++ + + A ++ +P
Sbjct: 472 TNAFKMYNEMTSAGFTPCITTYNALLNVLSRQGDWSTAQSIVSKMRTKGFKP 523
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 91/373 (24%), Positives = 168/373 (45%), Gaps = 9/373 (2%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
L+ +GK G++ +A +VL M + G P V++ L Y R G ++ A M S G
Sbjct: 286 LLQVFGKAGNYTEALRVLGEMEQNGCQPDAVTYNELAGTYARAGFFEEAARCLDTMASKG 345
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDE-EKSPLKPDQKMFHMMIYMYKKAGGY 220
P+A TY ++ + K EA + L D+ +K+ P+ +++++ M K +
Sbjct: 346 LLPNAFTYNTVMTAYGNVGKVDEA----LALFDQMKKTGFVPNVNTYNLVLGMLGKKSRF 401
Query: 221 EKARKLFALMAERGVQQSTVTYNSLMSFETNYK---EVSKIYDQMQRAGLQPDVVSYALL 277
++ M+ G + VT+N++++ V+++ + M+ G++ +Y L
Sbjct: 402 TVMLEMLGEMSRSGCTPNRVTWNTMLAVCGKRGMEDYVTRVLEGMRSCGVELSRDTYNTL 461
Query: 278 INAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRC 337
I AYG+ A ++ EM AG P YN LL+ + G A+++ MR
Sbjct: 462 IAAYGRCGSRTNAFKMYNEMTSAGFTPCITTYNALLNVLSRQGDWSTAQSIVSKMRTKGF 521
Query: 338 SPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFV-PNVITYGTLIKGYAKVNNLEKMM 396
P+ SY+ +L Y ++ G + G V P+ + TL+ K L+ M
Sbjct: 522 KPNEQSYSLLLQCYAKGGNVAGIAAIENEVYGSGAVFPSWVILRTLVIANFKCRRLDGME 581
Query: 397 EIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLA 456
+ +++ G P+ IF +++ Y KN + A + ++ G PD N L+ +
Sbjct: 582 TAFQEVKARGYNPDLVIFNSMLSIYAKNGMYSKATEVFDSIKRSGLSPDLITYNSLMDMY 641
Query: 457 KTADERNEANELL 469
E EA ++L
Sbjct: 642 AKCSESWEAEKIL 654
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 92/382 (24%), Positives = 179/382 (46%), Gaps = 7/382 (1%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
+I A + G ++A + +G+AP VV++ AL++ +G+ G Y A + M+ +G
Sbjct: 251 VIAACCRDGLVDEAVAFFEDLKARGHAPCVVTYNALLQVFGKAGNYTEALRVLGEMEQNG 310
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
+P A+TY + + A F+EA T+ + L P+ ++ ++ Y G +
Sbjct: 311 CQPDAVTYNELAGTYARAGFFEEAARCLDTMASKG---LLPNAFTYNTVMTAYGNVGKVD 367
Query: 222 KARKLFALMAERGVQQSTVTYNSLMSF---ETNYKEVSKIYDQMQRAGLQPDVVSYALLI 278
+A LF M + G + TYN ++ ++ + + ++ +M R+G P+ V++ ++
Sbjct: 368 EALALFDQMKKTGFVPNVNTYNLVLGMLGKKSRFTVMLEMLGEMSRSGCTPNRVTWNTML 427
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCS 338
GK E+ V E M GV + YN L+ A+ G A ++ M +
Sbjct: 428 AVCGKRGMEDYVTRVLEGMRSCGVELSRDTYNTLIAAYGRCGSRTNAFKMYNEMTSAGFT 487
Query: 339 PDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEI 398
P I +Y +L+ D A+ +++ GF PN +Y L++ YAK N+ + I
Sbjct: 488 PCITTYNALLNVLSRQGDWSTAQSIVSKMRTKGFKPNEQSYSLLLQCYAKGGNVAGIAAI 547
Query: 399 YDKMRVNG-IKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAK 457
+++ +G + P+ I T++ A K + D ++E+++ G+ PD N +LS+
Sbjct: 548 ENEVYGSGAVFPSWVILRTLVIANFKCRRLDGMETAFQEVKARGYNPDLVIFNSMLSIYA 607
Query: 458 TADERNEANELLGNFNHPNNEP 479
++A E+ + P
Sbjct: 608 KNGMYSKATEVFDSIKRSGLSP 629
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 87/330 (26%), Positives = 157/330 (47%), Gaps = 15/330 (4%)
Query: 135 TALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLD 194
T+L++A G ++ A A+ R G ++ L++ V A + + LLD
Sbjct: 108 TSLLKALELSGHWEWALALLRWAGKEGAADAS-----ALEMVVRALGREGQHDAVCALLD 162
Query: 195 EEKSPLKP----DQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLM---- 246
E +PL P D + + +++ +AG YE+A +LFA + +GV + VTYN ++
Sbjct: 163 E--TPLPPGSRLDVRAYTTVLHALSRAGRYERALELFAELRRQGVAPTLVTYNVVLDVYG 220
Query: 247 SFETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTH 306
++ + + D+M+ AG++PD + + +I A + +EA+A FE++ G P
Sbjct: 221 RMGRSWPRIVALLDEMRAAGVEPDGFTASTVIAACCRDGLVDEAVAFFEDLKARGHAPCV 280
Query: 307 KAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRR 366
YN LL F +G +A V M ++ C PD +Y + Y A E A +
Sbjct: 281 VTYNALLQVFGKAGNYTEALRVLGEMEQNGCQPDAVTYNELAGTYARAGFFEEAARCLDT 340
Query: 367 LKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKD 426
+ G +PN TY T++ Y V +++ + ++D+M+ G PN + ++ GK
Sbjct: 341 MASKGLLPNAFTYNTVMTAYGNVGKVDEALALFDQMKKTGFVPNVNTYNLVLGMLGKKSR 400
Query: 427 FDSAVVWYKEMESCGFPPDQKAKNILLSLA 456
F + EM G P++ N +L++
Sbjct: 401 FTVMLEMLGEMSRSGCTPNRVTWNTMLAVC 430
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 101/458 (22%), Positives = 177/458 (38%), Gaps = 115/458 (25%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
L Y + G F +A + L M KG P+ ++ +M AYG G+ A A+F +M+ +G
Sbjct: 321 LAGTYARAGFFEEAARCLDTMASKGLLPNAFTYNTVMTAYGNVGKVDEALALFDQMKKTG 380
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDE-EKSPLKPDQKMFHMM---------- 210
P+ TY ++L + + ++F V + +L E +S P++ ++ M
Sbjct: 381 FVPNVNTYNLVLGMLGKKSRFT----VMLEMLGEMSRSGCTPNRVTWNTMLAVCGKRGME 436
Query: 211 -------------------------IYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSL 245
I Y + G A K++ M G TYN+L
Sbjct: 437 DYVTRVLEGMRSCGVELSRDTYNTLIAAYGRCGSRTNAFKMYNEMTSAGFTPCITTYNAL 496
Query: 246 M---SFETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGK------------------- 283
+ S + ++ I +M+ G +P+ SY+LL+ Y K
Sbjct: 497 LNVLSRQGDWSTAQSIVSKMRTKGFKPNEQSYSLLLQCYAKGGNVAGIAAIENEVYGSGA 556
Query: 284 -----------------ARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQAR 326
RR + F+E+ G P +N +L +A +GM +A
Sbjct: 557 VFPSWVILRTLVIANFKCRRLDGMETAFQEVKARGYNPDLVIFNSMLSIYAKNGMYSKAT 616
Query: 327 TVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLK------------------ 368
VF ++R SPD+ +Y +++ Y S+ AEK +LK
Sbjct: 617 EVFDSIKRSGLSPDLITYNSLMDMYAKCSESWEAEKILNQLKCSQTMKPDVVSYNTVING 676
Query: 369 ------------------QDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPN 410
DG P +TY TL+ GY+ + + E+ M +G+KP
Sbjct: 677 FCKQGLVKEAQRVLSEMVADGMAPCAVTYHTLVGGYSSLEMFSEAREVIGYMVQHGLKPM 736
Query: 411 QTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKA 448
+ + ++++Y + K F+ A + E+ D+KA
Sbjct: 737 ELTYRRVVESYCRAKRFEEARGFLSEVSETDLDFDKKA 774
>gi|255542424|ref|XP_002512275.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223548236|gb|EEF49727.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 532
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 100/395 (25%), Positives = 183/395 (46%), Gaps = 11/395 (2%)
Query: 67 LVRLKQLKKWN----VVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFM 122
LV + +K+ N V + +E+ R+ + +LI + + G + E V+ +M
Sbjct: 60 LVAFEVIKRLNNNPQVGLKFMEFCRLNFSLIHCFSTYELLIRSLCQMGLHDLVEMVIGYM 119
Query: 123 NKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKF 182
G+ L+ ++ + G++ A+ + +Q R S+ Y +L V+ K
Sbjct: 120 RSDGHLIDSRVLGFLVTSFAQAGKFDLAKKLIIEVQGEEARISSFVYNYLLNELVKGGKV 179
Query: 183 KEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTY 242
EA +F L SP P+ F+++I + G EK +LF M G VTY
Sbjct: 180 HEAIFLFKENL-AFHSP--PNTWTFNILIRGLCRVGEVEKGFELFNAMQSFGCLPDVVTY 236
Query: 243 NSLMSFETNYKEVSKIYDQMQ----RAGLQPDVVSYALLINAYGKARREEEALAVFEEML 298
N+L+S E+ + D ++ R PDV++Y +I+ + K + E A +FEEM+
Sbjct: 237 NTLISGLCKANELDRACDLLKEVQSRNDCSPDVMTYTSIISGFRKLGKLEAASVLFEEMI 296
Query: 299 DAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDME 358
+G+ PT +N+L+D F G + A + + M C PD+ ++T+++ Y D+
Sbjct: 297 RSGIEPTVVTFNVLIDGFGKIGNMVAAEAMHEKMASYSCIPDVVTFTSLIDGYCRTGDIR 356
Query: 359 GAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIM 418
K + +K PN+ TY +I K N + + ++ +++ + + P I+ ++
Sbjct: 357 LGLKVWDVMKARNVSPNIYTYSVIINALCKDNRIHEARDLLRQLKCSDVFPKPFIYNPVI 416
Query: 419 DAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILL 453
D + K + D A V EME PD+ IL+
Sbjct: 417 DGFCKAGNVDEANVIVTEMEEKRCRPDKVTFTILI 451
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 59/271 (21%), Positives = 126/271 (46%), Gaps = 4/271 (1%)
Query: 203 DQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSK---IY 259
D ++ ++ + +AG ++ A+KL + + S+ YN L++ +V + ++
Sbjct: 127 DSRVLGFLVTSFAQAGKFDLAKKLIIEVQGEEARISSFVYNYLLNELVKGGKVHEAIFLF 186
Query: 260 DQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAIS 319
+ P+ ++ +LI + E+ +F M G P YN L+ +
Sbjct: 187 KENLAFHSPPNTWTFNILIRGLCRVGEVEKGFELFNAMQSFGCLPDVVTYNTLISGLCKA 246
Query: 320 GMVDQARTVFK-CMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVIT 378
+D+A + K R+ CSPD+ +YT+++S + +E A F + + G P V+T
Sbjct: 247 NELDRACDLLKEVQSRNDCSPDVMTYTSIISGFRKLGKLEAASVLFEEMIRSGIEPTVVT 306
Query: 379 YGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEME 438
+ LI G+ K+ N+ +++KM P+ FT+++D Y + D + + M+
Sbjct: 307 FNVLIDGFGKIGNMVAAEAMHEKMASYSCIPDVVTFTSLIDGYCRTGDIRLGLKVWDVMK 366
Query: 439 SCGFPPDQKAKNILLSLAKTADERNEANELL 469
+ P+ +++++ + +EA +LL
Sbjct: 367 ARNVSPNIYTYSVIINALCKDNRIHEARDLL 397
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 66/302 (21%), Positives = 125/302 (41%), Gaps = 47/302 (15%)
Query: 92 WDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAE 151
W FN +LI + G+ K ++ + M G P VV++ L+ + A
Sbjct: 199 WTFN-----ILIRGLCRVGEVEKGFELFNAMQSFGCLPDVVTYNTLISGLCKANELDRAC 253
Query: 152 AIFRRMQSSG-PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMM 210
+ + +QS P +TY I+ F + K + A +F ++ +S ++P F+++
Sbjct: 254 DLLKEVQSRNDCSPDVMTYTSIISGFRKLGKLEAASVLFEEMI---RSGIEPTVVTFNVL 310
Query: 211 IYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVS---KIYDQMQRAGL 267
I + K G A + MA VT+ SL+ ++ K++D M+ +
Sbjct: 311 IDGFGKIGNMVAAEAMHEKMASYSCIPDVVTFTSLIDGYCRTGDIRLGLKVWDVMKARNV 370
Query: 268 QPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQART 327
P++ +Y+++INA K R EA + ++ + V P YN ++D F +G VD+A
Sbjct: 371 SPNIYTYSVIINALCKDNRIHEARDLLRQLKCSDVFPKPFIYNPVIDGFCKAGNVDEANV 430
Query: 328 V-----------------------------------FKCMRRDRCSPDICSYTTMLSAYV 352
+ FK M C+PD + +++++ +
Sbjct: 431 IVTEMEEKRCRPDKVTFTILIIGHCMKGRMVEALDIFKKMLAIGCAPDNITISSLVACLL 490
Query: 353 NA 354
A
Sbjct: 491 KA 492
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/260 (23%), Positives = 120/260 (46%), Gaps = 8/260 (3%)
Query: 40 EVGSAVAVLRSERTRGQPLPKDLVLGTLVR-LKQLKKWNVVSEVLEWLRIQSWWDFNEMD 98
E+ A +L+ ++R P + +++ ++L K S + E + I+S + +
Sbjct: 248 ELDRACDLLKEVQSRNDCSPDVMTYTSIISGFRKLGKLEAASVLFEEM-IRSGIEPTVVT 306
Query: 99 FLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQ 158
F +LI +GK G+ AE + M P VV+ T+L++ Y R G + ++ M+
Sbjct: 307 FNVLIDGFGKIGNMVAAEAMHEKMASYSCIPDVVTFTSLIDGYCRTGDIRLGLKVWDVMK 366
Query: 159 SSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAG 218
+ P+ TY +I+ + N+ EA ++ L + S + P +++ +I + KAG
Sbjct: 367 ARNVSPNIYTYSVIINALCKDNRIHEARDLLRQL---KCSDVFPKPFIYNPVIDGFCKAG 423
Query: 219 GYEKARKLFALMAERGVQQSTVTYNSLM---SFETNYKEVSKIYDQMQRAGLQPDVVSYA 275
++A + M E+ + VT+ L+ + E I+ +M G PD ++ +
Sbjct: 424 NVDEANVIVTEMEEKRCRPDKVTFTILIIGHCMKGRMVEALDIFKKMLAIGCAPDNITIS 483
Query: 276 LLINAYGKARREEEALAVFE 295
L+ KA + EA + +
Sbjct: 484 SLVACLLKAGKPSEAFHIVQ 503
>gi|147833287|emb|CAN77475.1| hypothetical protein VITISV_041111 [Vitis vinifera]
Length = 1010
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 92/346 (26%), Positives = 153/346 (44%), Gaps = 47/346 (13%)
Query: 119 LSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVE 178
L+ + K+ + V +T ++ ++ A RM+SS P+ +TY+I+L +
Sbjct: 287 LALIEKEEFKLDTVIYTQMISGLCEASLFEEAMDFLSRMRSSSCIPNVVTYRILLCGCLR 346
Query: 179 ANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQS 238
+ + + ++ E P +++F+ +I+ Y ++G Y A KL M + G Q
Sbjct: 347 KRQLGRCKRILSMMITE---GCYPSRRIFNSLIHAYCRSGDYSYAYKLLKKMGDCGCQPG 403
Query: 239 TVTYNSLMS----------------FETNYKEV--------------------------- 255
V YN L+ E Y E+
Sbjct: 404 YVVYNILIGGICGNEKLPSLDVLELAEKAYGEMLDAHVVLNKVNVSNLARCLCGAGKFEK 463
Query: 256 -SKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLD 314
I +M G PD +Y+ +I A + + A +FEEM V P Y IL+D
Sbjct: 464 AYSIIREMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFTYTILID 523
Query: 315 AFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVP 374
+F G++ QAR F M RD C+P++ +YT ++ AY+ A M A + F + +G +P
Sbjct: 524 SFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSANELFEMMLSEGCIP 583
Query: 375 NVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDA 420
NV+TY LI G+ K +EK +IY +MR N P+ ++ I D
Sbjct: 584 NVVTYTALIDGHCKSGQIEKACQIYARMRGNADIPDVDMYFKIDDG 629
Score = 142 bits (357), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 94/395 (23%), Positives = 175/395 (44%), Gaps = 22/395 (5%)
Query: 94 FNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAI 153
N+++ L G F KA ++ M KG+ P +++ ++ + NA +
Sbjct: 443 LNKVNVSNLARCLCGAGKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLL 502
Query: 154 FRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYM 213
F M+S+ P TY I++ F + ++A + F ++ + P+ + +I+
Sbjct: 503 FEEMKSNHVVPDVFTYTILIDSFCKVGLLQQARKWFDEMV---RDGCAPNVVTYTALIHA 559
Query: 214 YKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSK---IYDQMQRAGLQPD 270
Y KA A +LF +M G + VTY +L+ ++ K IY +M+ PD
Sbjct: 560 YLKARKMSSANELFEMMLSEGCIPNVVTYTALIDGHCKSGQIEKACQIYARMRGNADIPD 619
Query: 271 V----------------VSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLD 314
V +Y L++ KA + +EA + + M G P H Y+ L+D
Sbjct: 620 VDMYFKIDDGNIRDPNIFTYGALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVYDALID 679
Query: 315 AFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVP 374
F G +D+A+ VF M P++ +Y++++ ++ A K R+ ++ P
Sbjct: 680 GFCKVGKLDEAQMVFTKMSERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRMLENSCAP 739
Query: 375 NVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWY 434
NVI Y +I G KV ++ + M G PN +T ++D +GK D +
Sbjct: 740 NVIIYTEMIDGLCKVGKTDEAYRLMSMMEEKGCHPNVVTYTAMIDGFGKAGKVDKCLELM 799
Query: 435 KEMESCGFPPDQKAKNILLSLAKTADERNEANELL 469
++M + G P+ +L++ A ++A++LL
Sbjct: 800 RQMGAKGCAPNFVTYRVLINHCCAAGLLDDAHQLL 834
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 88/376 (23%), Positives = 174/376 (46%), Gaps = 28/376 (7%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + + +L+ ++ + +++LS M +G PS +L+ AY R G Y A +
Sbjct: 333 NVVTYRILLCGCLRKRQLGRCKRILSMMITEGCYPSRRIFNSLIHAYCRSGDYSYAYKLL 392
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKE------AEEVFMTLLDEEKSPLKPDQKMFH 208
++M G +P + Y I++ K AE+ + +LD K +
Sbjct: 393 KKMGDCGCQPGYVVYNILIGGICGNEKLPSLDVLELAEKAYGEMLDAHVVLNKVNVSNLA 452
Query: 209 MMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSK---IYDQMQRA 265
+ AG +EKA + M +G T TY+ ++ N +V ++++M+
Sbjct: 453 RCLC---GAGKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSN 509
Query: 266 GLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQA 325
+ PDV +Y +LI+++ K ++A F+EM+ G P Y L+ A+ + + A
Sbjct: 510 HVVPDVFTYTILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSA 569
Query: 326 RTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLK--------------QDG 371
+F+ M + C P++ +YT ++ + + +E A + + R++ DG
Sbjct: 570 NELFEMMLSEGCIPNVVTYTALIDGHCKSGQIEKACQIYARMRGNADIPDVDMYFKIDDG 629
Query: 372 FV--PNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDS 429
+ PN+ TYG L+ G K + +++ ++ D M V G +PN ++ ++D + K D
Sbjct: 630 NIRDPNIFTYGALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDE 689
Query: 430 AVVWYKEMESCGFPPD 445
A + + +M G+ P+
Sbjct: 690 AQMVFTKMSERGYGPN 705
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 85/350 (24%), Positives = 159/350 (45%), Gaps = 28/350 (8%)
Query: 99 FLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQ 158
+ +LI ++ K G +A K M + G AP+VV++TAL+ AY + + +A +F M
Sbjct: 518 YTILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSANELFEMML 577
Query: 159 SSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSP-------------LKPDQK 205
S G P+ +TY ++ ++ + ++A +++ + P P+
Sbjct: 578 SEGCIPNVVTYTALIDGHCKSGQIEKACQIYARMRGNADIPDVDMYFKIDDGNIRDPNIF 637
Query: 206 MFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLM-SFETNYK--EVSKIYDQM 262
+ ++ KA ++AR L +M+ G + + + Y++L+ F K E ++ +M
Sbjct: 638 TYGALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFTKM 697
Query: 263 QRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMV 322
G P+V +Y+ LI+ K +R + AL V ML+ P Y ++D G
Sbjct: 698 SERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRMLENSCAPNVIIYTEMIDGLCKVGKT 757
Query: 323 DQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTL 382
D+A + M C P++ +YT M+ + A ++ + R++ G PN +TY L
Sbjct: 758 DEAYRLMSMMEEKGCHPNVVTYTAMIDGFGKAGKVDKCLELMRQMGAKGCAPNFVTYRVL 817
Query: 383 IKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAY-----GKNKDF 427
I L+ ++ D+M+ QT + M Y G N++F
Sbjct: 818 INHCCAAGLLDDAHQLLDEMK-------QTYWPKHMAGYRKVIEGFNREF 860
Score = 115 bits (288), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 85/367 (23%), Positives = 175/367 (47%), Gaps = 28/367 (7%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + + LI AY K + A ++ M +G P+VV++TAL++ + + G+ + A I+
Sbjct: 549 NVVTYTALIHAYLKARKMSSANELFEMMLSEGCIPNVVTYTALIDGHCKSGQIEKACQIY 608
Query: 155 RRMQSSGP----------------RPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKS 198
RM+ + P+ TY ++ +A+K KEA ++ + E
Sbjct: 609 ARMRGNADIPDVDMYFKIDDGNIRDPNIFTYGALVDGLCKAHKVKEARDLLDVMSVE--- 665
Query: 199 PLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMS--FETNYKEVS 256
+P+ ++ +I + K G ++A+ +F M+ERG + TY+SL+ F+ +++
Sbjct: 666 GCEPNHIVYDALIDGFCKVGKLDEAQMVFTKMSERGYGPNVYTYSSLIDRLFKDKRLDLA 725
Query: 257 -KIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDA 315
K+ +M P+V+ Y +I+ K + +EA + M + G P Y ++D
Sbjct: 726 LKVLSRMLENSCAPNVIIYTEMIDGLCKVGKTDEAYRLMSMMEEKGCHPNVVTYTAMIDG 785
Query: 316 FAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPN 375
F +G VD+ + + M C+P+ +Y +++ A ++ A + +KQ + +
Sbjct: 786 FGKAGKVDKCLELMRQMGAKGCAPNFVTYRVLINHCCAAGLLDDAHQLLDEMKQTYWPKH 845
Query: 376 VITYGTLIKGYAK--VNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVW 433
+ Y +I+G+ + + +L + EI + + V P + ++D++ K + A+
Sbjct: 846 MAGYRKVIEGFNREFIISLGLLDEIAENVAV----PIIPAYRILIDSFCKAGRLELALEL 901
Query: 434 YKEMESC 440
+K M SC
Sbjct: 902 HKXMSSC 908
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 86/380 (22%), Positives = 157/380 (41%), Gaps = 19/380 (5%)
Query: 101 MLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSS 160
+LI + G +N A + L + GY PS +++ AL+ + R A + R M S
Sbjct: 202 VLIRKCCRNGLWNVALEELGRLKDLGYKPSRLTYNALVRVFLEADRLDTAYLVHREMSDS 261
Query: 161 GPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGY 220
G T + L +A +++EA + EK K D ++ MI +A +
Sbjct: 262 GFNMDGYTLGCFVHLLCKAGRWREALALI------EKEEFKLDTVIYTQMISGLCEASLF 315
Query: 221 EKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSK---IYDQMQRAGLQPDVVSYALL 277
E+A + M + VTY L+ +++ + I M G P + L
Sbjct: 316 EEAMDFLSRMRSSSCIPNVVTYRILLCGCLRKRQLGRCKRILSMMITEGCYPSRRIFNSL 375
Query: 278 INAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISG--------MVDQARTVF 329
I+AY ++ A + ++M D G +P + YNIL+ I G +++ A +
Sbjct: 376 IHAYCRSGDYSYAYKLLKKMGDCGCQPGYVVYNILIGG--ICGNEKLPSLDVLELAEKAY 433
Query: 330 KCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKV 389
M + + + + A E A R + GF+P+ TY +I
Sbjct: 434 GEMLDAHVVLNKVNVSNLARCLCGAGKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNA 493
Query: 390 NNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAK 449
+ ++ ++++M+ N + P+ +T ++D++ K A W+ EM G P+
Sbjct: 494 SKVDNAFLLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTY 553
Query: 450 NILLSLAKTADERNEANELL 469
L+ A + + ANEL
Sbjct: 554 TALIHAYLKARKMSSANELF 573
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 77/341 (22%), Positives = 159/341 (46%), Gaps = 18/341 (5%)
Query: 59 PKDLVLGTLVRLKQLKKWNVVSEVLEWLRIQSW--WDFNEMDFLMLITAYGKQGDFNKAE 116
P G LV L K + V E + L + S + N + + LI + K G ++A+
Sbjct: 634 PNIFTYGALV--DGLCKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQ 691
Query: 117 KVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLF 176
V + M+++GY P+V ++++L++ + R A + RM + P+ + Y ++
Sbjct: 692 MVFTKMSERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRMLENSCAPNVIIYTEMIDGL 751
Query: 177 VEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQ 236
+ K EA + M++++E+ P+ + MI + KAG +K +L M +G
Sbjct: 752 CKVGKTDEAYRL-MSMMEEKGC--HPNVVTYTAMIDGFGKAGKVDKCLELMRQMGAKGCA 808
Query: 237 QSTVTYNSLMSFETN---YKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAV 293
+ VTY L++ + ++ D+M++ + Y +I + R +L +
Sbjct: 809 PNFVTYRVLINHCCAAGLLDDAHQLLDEMKQTYWPKHMAGYRKVIEGFN--REFIISLGL 866
Query: 294 FEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFK----CMRRDRCSPDICSYTTMLS 349
+E+ + P AY IL+D+F +G ++ A + K C D+ Y++++
Sbjct: 867 LDEIAENVAVPIIPAYRILIDSFCKAGRLELALELHKXMSSCTSYSAADKDL--YSSLIE 924
Query: 350 AYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVN 390
+ AS ++ A + + + + G +P + + L+KG ++N
Sbjct: 925 SLSLASKVDKAFELYADMIKRGGIPELSIFFYLVKGLIRIN 965
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 73/364 (20%), Positives = 140/364 (38%), Gaps = 50/364 (13%)
Query: 136 ALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDE 195
L+ R G + A R++ G +PS LTY ++++F+EA++ A V + D
Sbjct: 202 VLIRKCCRNGLWNVALEELGRLKDLGYKPSRLTYNALVRVFLEADRLDTAYLVHREMSD- 260
Query: 196 EKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSF---ETNY 252
S D +++ KAG + +A AL+ + + TV Y ++S + +
Sbjct: 261 --SGFNMDGYTLGCFVHLLCKAGRWREA---LALIEKEEFKLDTVIYTQMISGLCEASLF 315
Query: 253 KEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNIL 312
+E +M+ + P+VV+Y +L+ + R+ + M+ G P+ + +N
Sbjct: 316 EEAMDFLSRMRSSSCIPNVVTYRILLCGCLRKRQLGRCKRILSMMITEGCYPSRRIFN-- 373
Query: 313 LDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGF 372
+++ AY + D A K +++ G
Sbjct: 374 ---------------------------------SLIHAYCRSGDYSYAYKLLKKMGDCGC 400
Query: 373 VPNVITYGTLIKGYA------KVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKD 426
P + Y LI G ++ LE + Y +M + N+ + +
Sbjct: 401 QPGYVVYNILIGGICGNEKLPSLDVLELAEKAYGEMLDAHVVLNKVNVSNLARCLCGAGK 460
Query: 427 FDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGINGLSI 486
F+ A +EM S GF PD + ++ L A + + A L + P + +I
Sbjct: 461 FEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFTYTI 520
Query: 487 SVDE 490
+D
Sbjct: 521 LIDS 524
>gi|242047600|ref|XP_002461546.1| hypothetical protein SORBIDRAFT_02g004520 [Sorghum bicolor]
gi|241924923|gb|EER98067.1| hypothetical protein SORBIDRAFT_02g004520 [Sorghum bicolor]
Length = 532
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 94/361 (26%), Positives = 174/361 (48%), Gaps = 8/361 (2%)
Query: 114 KAEKVLSFMNKKG--YAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQI 171
+A +++ M + G P VVS++ ++ + + G A +F +M G P+ +T
Sbjct: 102 EAAELIHMMAEDGDNCPPDVVSYSTVIHGFFKEGDVGKAYTLFCKMLDHGIPPNVVTCNS 161
Query: 172 ILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMA 231
++ + +AE V ++DE + P+ ++ +I+ Y +G + +A ++ M+
Sbjct: 162 VIDGLCKVQAMDKAEAVLQQMIDEH---IMPNCTTYNSLIHGYLSSGQWTEAVRILKEMS 218
Query: 232 ERGVQQSTVTYNSLMSFETN---YKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREE 288
G + + VTYN L+ + E +I++ M ++G +PD +Y L++ Y
Sbjct: 219 RDGQRPNVVTYNMLIDCLCKSGFHAEAREIFNSMIQSGPKPDATTYGSLLHGYATEGNLV 278
Query: 289 EALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTML 348
E V + M+ G+R H ++I + A+ G +D+A F M++ PDI +YTT++
Sbjct: 279 EMNNVKDLMVQNGMRSNHHTFSIEIYAYCKCGRLDEASLTFIKMQQLGFMPDIVTYTTVI 338
Query: 349 SAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIK 408
++ A F ++ DG PN+IT+ TLI G++ EK E++ +M GI
Sbjct: 339 DGLCKIGRLDDAMSRFCQMIDDGLSPNIITFTTLIHGFSMYGKWEKAEELFYEMMDRGIP 398
Query: 409 PNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANEL 468
P+ TIFT ++D K A + M G P+ + N ++ A E E +L
Sbjct: 399 PDVTIFTAMIDRLFKEGKVTEAQKLFDLMPRAGAKPNVVSYNTMIHGYFIAGEVGEVMKL 458
Query: 469 L 469
L
Sbjct: 459 L 459
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 86/335 (25%), Positives = 167/335 (49%), Gaps = 9/335 (2%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
+I K +KAE VL M + P+ ++ +L+ Y G++ A I + M G
Sbjct: 162 VIDGLCKVQAMDKAEAVLQQMIDEHIMPNCTTYNSLIHGYLSSGQWTEAVRILKEMSRDG 221
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
RP+ +TY +++ ++ EA E+F +++ +S KPD + +++ Y G
Sbjct: 222 QRPNVVTYNMLIDCLCKSGFHAEAREIFNSMI---QSGPKPDATTYGSLLHGYATEGNLV 278
Query: 222 KARKLFALMAERGVQQSTVTYN-SLMSFETNYK--EVSKIYDQMQRAGLQPDVVSYALLI 278
+ + LM + G++ + T++ + ++ + E S + +MQ+ G PD+V+Y +I
Sbjct: 279 EMNNVKDLMVQNGMRSNHHTFSIEIYAYCKCGRLDEASLTFIKMQQLGFMPDIVTYTTVI 338
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCS 338
+ K R ++A++ F +M+D G+ P + L+ F++ G ++A +F M
Sbjct: 339 DGLCKIGRLDDAMSRFCQMIDDGLSPNIITFTTLIHGFSMYGKWEKAEELFYEMMDRGIP 398
Query: 339 PDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEI 398
PD+ +T M+ + A+K F + + G PNV++Y T+I GY + ++M++
Sbjct: 399 PDVTIFTAMIDRLFKEGKVTEAQKLFDLMPRAGAKPNVVSYNTMIHGYFIAGEVGEVMKL 458
Query: 399 YDKMRVNGIKPNQTIFTTIMD---AYGKNKDFDSA 430
D M + G+KP F T++D + G D D+
Sbjct: 459 LDDMLLIGLKPTAVTFNTLLDGMVSMGLKPDVDTC 493
Score = 142 bits (357), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 100/386 (25%), Positives = 166/386 (43%), Gaps = 40/386 (10%)
Query: 99 FLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNA-EAIFRRM 157
F +LI+ G N L + K G V+ T L+ R +A + RRM
Sbjct: 16 FGILISCCCDAGCLNLGFAALGQIIKTGLRADAVAFTPLLRTLCAKKRTSDAMNIVLRRM 75
Query: 158 QSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKA 217
G P +Y +LK K +EA E+ + ++ E+ PD + +I+ + K
Sbjct: 76 PELGCTPDVFSYSTLLKGLCAEKKCEEAAEL-IHMMAEDGDNCPPDVVSYSTVIHGFFKE 134
Query: 218 GGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSK---IYDQMQRAGLQPDVVSY 274
G KA LF M + G+ + VT NS++ + + K + QM + P+ +Y
Sbjct: 135 GDVGKAYTLFCKMLDHGIPPNVVTCNSVIDGLCKVQAMDKAEAVLQQMIDEHIMPNCTTY 194
Query: 275 ALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRR 334
LI+ Y + + EA+ + +EM G RP YN+L+D SG +AR +F M +
Sbjct: 195 NSLIHGYLSSGQWTEAVRILKEMSRDGQRPNVVTYNMLIDCLCKSGFHAEAREIFNSMIQ 254
Query: 335 DRCSPDICSYTTMLS-----------------------------------AYVNASDMEG 359
PD +Y ++L AY ++
Sbjct: 255 SGPKPDATTYGSLLHGYATEGNLVEMNNVKDLMVQNGMRSNHHTFSIEIYAYCKCGRLDE 314
Query: 360 AEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMD 419
A F +++Q GF+P+++TY T+I G K+ L+ M + +M +G+ PN FTT++
Sbjct: 315 ASLTFIKMQQLGFMPDIVTYTTVIDGLCKIGRLDDAMSRFCQMIDDGLSPNIITFTTLIH 374
Query: 420 AYGKNKDFDSAVVWYKEMESCGFPPD 445
+ ++ A + EM G PPD
Sbjct: 375 GFSMYGKWEKAEELFYEMMDRGIPPD 400
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 71/287 (24%), Positives = 121/287 (42%), Gaps = 49/287 (17%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYG------------ 142
N + + MLI K G +A ++ + M + G P ++ +L+ Y
Sbjct: 225 NVVTYNMLIDCLCKSGFHAEAREIFNSMIQSGPKPDATTYGSLLHGYATEGNLVEMNNVK 284
Query: 143 -----------------------RGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEA 179
+ GR A F +MQ G P +TY ++ +
Sbjct: 285 DLMVQNGMRSNHHTFSIEIYAYCKCGRLDEASLTFIKMQQLGFMPDIVTYTTVIDGLCKI 344
Query: 180 NKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQST 239
+ +A F ++D+ L P+ F +I+ + G +EKA +LF M +RG+
Sbjct: 345 GRLDDAMSRFCQMIDDG---LSPNIITFTTLIHGFSMYGKWEKAEELFYEMMDRGIPPDV 401
Query: 240 VTYNSLMSF---ETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEE 296
+ +++ E E K++D M RAG +P+VVSY +I+ Y A E + + ++
Sbjct: 402 TIFTAMIDRLFKEGKVTEAQKLFDLMPRAGAKPNVVSYNTMIHGYFIAGEVGEVMKLLDD 461
Query: 297 MLDAGVRPTHKAYNILLDAFAISGM---VDQARTVFKCMRRDRCSPD 340
ML G++PT +N LLD G+ VD +T+ D C D
Sbjct: 462 MLLIGLKPTAVTFNTLLDGMVSMGLKPDVDTCKTLI-----DSCCED 503
Score = 95.1 bits (235), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 64/235 (27%), Positives = 111/235 (47%), Gaps = 25/235 (10%)
Query: 86 LRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGG 145
L +Q+ N F + I AY K G ++A M + G+ P +V++T +++ + G
Sbjct: 286 LMVQNGMRSNHHTFSIEIYAYCKCGRLDEASLTFIKMQQLGFMPDIVTYTTVIDGLCKIG 345
Query: 146 RYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQK 205
R +A + F +M G P+ +T+ ++ F K+++AEE+F ++D + PD
Sbjct: 346 RLDDAMSRFCQMIDDGLSPNIITFTTLIHGFSMYGKWEKAEELFYEMMDRG---IPPDVT 402
Query: 206 MFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNS--------------------- 244
+F MI K G +A+KLF LM G + + V+YN+
Sbjct: 403 IFTAMIDRLFKEGKVTEAQKLFDLMPRAGAKPNVVSYNTMIHGYFIAGEVGEVMKLLDDM 462
Query: 245 -LMSFETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEML 298
L+ + + + D M GL+PDV + LI++ + R E+ L +F EML
Sbjct: 463 LLIGLKPTAVTFNTLLDGMVSMGLKPDVDTCKTLIDSCCEDGRIEDILTLFREML 517
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/234 (23%), Positives = 102/234 (43%), Gaps = 6/234 (2%)
Query: 262 MQRAG---LQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAI 318
M RAG + PD+ ++ +LI+ A A +++ G+R A+ LL
Sbjct: 1 MARAGAKKVAPDIATFGILISCCCDAGCLNLGFAALGQIIKTGLRADAVAFTPLLRTLCA 60
Query: 319 SGMV-DQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDG--FVPN 375
D V + M C+PD+ SY+T+L E A + + +DG P+
Sbjct: 61 KKRTSDAMNIVLRRMPELGCTPDVFSYSTLLKGLCAEKKCEEAAELIHMMAEDGDNCPPD 120
Query: 376 VITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYK 435
V++Y T+I G+ K ++ K ++ KM +GI PN +++D K + D A +
Sbjct: 121 VVSYSTVIHGFFKEGDVGKAYTLFCKMLDHGIPPNVVTCNSVIDGLCKVQAMDKAEAVLQ 180
Query: 436 EMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGINGLSISVD 489
+M P+ N L+ ++ + EA +L + P + ++ +D
Sbjct: 181 QMIDEHIMPNCTTYNSLIHGYLSSGQWTEAVRILKEMSRDGQRPNVVTYNMLID 234
>gi|255661212|gb|ACU25775.1| pentatricopeptide repeat-containing protein [Bouchea fluminensis]
Length = 426
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 91/378 (24%), Positives = 182/378 (48%), Gaps = 41/378 (10%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
LI K D++KA + S + + G P +V++ +++ +G+ ++ A ++ M+ G
Sbjct: 50 LIELSRKLYDYSKAISIFSRLKRSGIVPDLVAYNSMINVFGKAKLFREARSLISEMRMVG 109
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFM------TLLD--------------------- 194
P ++Y +L ++VE KF EA VF LLD
Sbjct: 110 VVPDTVSYSTLLTMYVENQKFLEALSVFAEMREIKCLLDLTTCNIMIDVYGQLDMAKEAD 169
Query: 195 -----EEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSF- 248
K ++P+ ++ ++ +Y A + +A LF LM + ++Q+ VTYN++M
Sbjct: 170 KLFWSMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNTMMMIY 229
Query: 249 --ETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTH 306
+++ + + +M G++P+ ++Y+ +I+ +GK + + A +F+++ +GV H
Sbjct: 230 GKTLEHEKANNLIQEMHSRGIEPNAITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDH 289
Query: 307 KAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRR 366
Y ++ A+ +G+V A+ + ++R PD T + A +E A FR+
Sbjct: 290 VLYQTMIVAYERAGLVAHAKRLLHELKR----PDNIPRDTAIHILAGAGRIEEATWVFRQ 345
Query: 367 LKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKD 426
G V ++ + ++ ++K ++E+++KMR G P+ + +++AYGK +
Sbjct: 346 AIDAGEVKDITVFERMVDLFSKYKKYPNVVEVFEKMRGLGYFPDSNVIALVLNAYGKLHE 405
Query: 427 FDSAVVWYKEM--ESCGF 442
FD A Y EM E C F
Sbjct: 406 FDKANDVYLEMQDEGCVF 423
Score = 132 bits (333), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 85/322 (26%), Positives = 153/322 (47%), Gaps = 6/322 (1%)
Query: 161 GPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGY 220
G P TY ++ F + F +A ++ +++++ P D ++ +I + +K Y
Sbjct: 4 GLSPXRYTYSTLITHFGKEGLFDDALS-WLQKMEQDRVP--GDLVLYSNLIELSRKLYDY 60
Query: 221 EKARKLFALMAERGVQQSTVTYNSLMSF---ETNYKEVSKIYDQMQRAGLQPDVVSYALL 277
KA +F+ + G+ V YNS+++ ++E + +M+ G+ PD VSY+ L
Sbjct: 61 SKAISIFSRLKRSGIVPDLVAYNSMINVFGKAKLFREARSLISEMRMVGVVPDTVSYSTL 120
Query: 278 INAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRC 337
+ Y + ++ EAL+VF EM + NI++D + M +A +F MR+
Sbjct: 121 LTMYVENQKFLEALSVFAEMREIKCLLDLTTCNIMIDVYGQLDMAKEADKLFWSMRKMGI 180
Query: 338 SPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMME 397
P++ SY T+L Y +A A FR +++ NV+TY T++ Y K EK
Sbjct: 181 EPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNTMMMIYGKTLEHEKANN 240
Query: 398 IYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAK 457
+ +M GI+PN ++TI+ +GK D A + ++++ S G D ++ +
Sbjct: 241 LIQEMHSRGIEPNAITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDHVLYQTMIVAYE 300
Query: 458 TADERNEANELLGNFNHPNNEP 479
A A LL P+N P
Sbjct: 301 RAGLVAHAKRLLHELKRPDNIP 322
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 72/301 (23%), Positives = 154/301 (51%), Gaps = 6/301 (1%)
Query: 124 KKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFK 183
++G +P +++ L+ +G+ G + +A + ++M+ + Y +++L + +
Sbjct: 2 ERGLSPXRYTYSTLITHFGKEGLFDDALSWLQKMEQDRVPGDLVLYSNLIELSRKLYDYS 61
Query: 184 EAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYN 243
+A +F L ++S + PD ++ MI ++ KA + +AR L + M GV TV+Y+
Sbjct: 62 KAISIFSRL---KRSGIVPDLVAYNSMINVFGKAKLFREARSLISEMRMVGVVPDTVSYS 118
Query: 244 SLMSFET---NYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDA 300
+L++ + E ++ +M+ D+ + ++I+ YG+ +EA +F M
Sbjct: 119 TLLTMYVENQKFLEALSVFAEMREIKCLLDLTTCNIMIDVYGQLDMAKEADKLFWSMRKM 178
Query: 301 GVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGA 360
G+ P +YN LL + + + +A +F+ M+R ++ +Y TM+ Y + E A
Sbjct: 179 GIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNTMMMIYGKTLEHEKA 238
Query: 361 EKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDA 420
+ + G PN ITY T+I + KV L++ ++ K+R +G++ + ++ T++ A
Sbjct: 239 NNLIQEMHSRGIEPNAITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDHVLYQTMIVA 298
Query: 421 Y 421
Y
Sbjct: 299 Y 299
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/181 (24%), Positives = 84/181 (46%)
Query: 301 GVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGA 360
G+ P Y+ L+ F G+ D A + + M +DR D+ Y+ ++ D A
Sbjct: 4 GLSPXRYTYSTLITHFGKEGLFDDALSWLQKMEQDRVPGDLVLYSNLIELSRKLYDYSKA 63
Query: 361 EKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDA 420
F RLK+ G VP+++ Y ++I + K + + +MR+ G+ P+ ++T++
Sbjct: 64 ISIFSRLKRSGIVPDLVAYNSMINVFGKAKLFREARSLISEMRMVGVVPDTVSYSTLLTM 123
Query: 421 YGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPG 480
Y +N+ F A+ + EM D NI++ + D EA++L + EP
Sbjct: 124 YVENQKFLEALSVFAEMREIKCLLDLTTCNIMIDVYGQLDMAKEADKLFWSMRKMGIEPN 183
Query: 481 I 481
+
Sbjct: 184 V 184
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/244 (22%), Positives = 114/244 (46%), Gaps = 6/244 (2%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + + L+ YG F +A + M +K +VV++ +M YG+ ++ A +
Sbjct: 183 NVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNTMMMIYGKTLEHEKANNLI 242
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
+ M S G P+A+TY I+ ++ + K A +F L S ++ D ++ MI Y
Sbjct: 243 QEMHSRGIEPNAITYSTIISIWGKVGKLDRAAMLFQKL---RSSGVEIDHVLYQTMIVAY 299
Query: 215 KKAGGYEKARKLFA-LMAERGVQQSTVTYNSLMSFETNYKEVSKIYDQMQRAGLQPDVVS 273
++AG A++L L + + T + +++ +E + ++ Q AG D+
Sbjct: 300 ERAGLVAHAKRLLHELKRPDNIPRDTAIH--ILAGAGRIEEATWVFRQAIDAGEVKDITV 357
Query: 274 YALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMR 333
+ +++ + K ++ + VFE+M G P ++L+A+ D+A V+ M+
Sbjct: 358 FERMVDLFSKYKKYPNVVEVFEKMRGLGYFPDSNVIALVLNAYGKLHEFDKANDVYLEMQ 417
Query: 334 RDRC 337
+ C
Sbjct: 418 DEGC 421
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 66/309 (21%), Positives = 130/309 (42%), Gaps = 45/309 (14%)
Query: 101 MLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSS 160
++I YG+ +A+K+ M K G P+VVS+ L+ YG + A +FR MQ
Sbjct: 154 IMIDVYGQLDMAKEADKLFWSMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRK 213
Query: 161 GPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGY 220
+ +TY + M+ +Y K +
Sbjct: 214 NIEQNVVTY--------------------------------------NTMMMIYGKTLEH 235
Query: 221 EKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSK---IYDQMQRAGLQPDVVSYALL 277
EKA L M RG++ + +TY++++S ++ + ++ +++ +G++ D V Y +
Sbjct: 236 EKANNLIQEMHSRGIEPNAITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDHVLYQTM 295
Query: 278 INAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRC 337
I AY +A A + E+ P A +IL A +G +++A VF+
Sbjct: 296 IVAYERAGLVAHAKRLLHELKRPDNIPRDTAIHIL----AGAGRIEEATWVFRQAIDAGE 351
Query: 338 SPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMME 397
DI + M+ + + F +++ G+ P+ ++ Y K++ +K +
Sbjct: 352 VKDITVFERMVDLFSKYKKYPNVVEVFEKMRGLGYFPDSNVIALVLNAYGKLHEFDKAND 411
Query: 398 IYDKMRVNG 406
+Y +M+ G
Sbjct: 412 VYLEMQDEG 420
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 49/216 (22%), Positives = 93/216 (43%)
Query: 266 GLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQA 325
GL P +Y+ LI +GK ++AL+ ++M V Y+ L++ +A
Sbjct: 4 GLSPXRYTYSTLITHFGKEGLFDDALSWLQKMEQDRVPGDLVLYSNLIELSRKLYDYSKA 63
Query: 326 RTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKG 385
++F ++R PD+ +Y +M++ + A A ++ G VP+ ++Y TL+
Sbjct: 64 ISIFSRLKRSGIVPDLVAYNSMINVFGKAKLFREARSLISEMRMVGVVPDTVSYSTLLTM 123
Query: 386 YAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPD 445
Y + + + ++ +MR + T ++D YG+ A + M G P+
Sbjct: 124 YVENQKFLEALSVFAEMREIKCLLDLTTCNIMIDVYGQLDMAKEADKLFWSMRKMGIEPN 183
Query: 446 QKAKNILLSLAKTADERNEANELLGNFNHPNNEPGI 481
+ N LL + A+ EA L N E +
Sbjct: 184 VVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNV 219
>gi|414872431|tpg|DAA50988.1| TPA: hypothetical protein ZEAMMB73_390723 [Zea mays]
Length = 1627
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 97/387 (25%), Positives = 181/387 (46%), Gaps = 42/387 (10%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
+ + + LI+A+ K G + A ++L+ M + G P+ +T L+ + + A ++F
Sbjct: 1219 DTVTYSALISAFCKLGRRDSAIQLLNEMKEIGMQPTTKIYTMLIALFFKFNDAHGALSLF 1278
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
M+ RP TY +++ +A + EA F + ++ +PD + MI
Sbjct: 1279 EEMRHQYCRPDVFTYTELIRGLGKAGRIDEAYHFFCEM---QREGCRPDTVFMNNMINFL 1335
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSLMS--FETNYK--EVSKIYDQMQRAGLQPD 270
KAG + A KLF M S VTYN+++ FE+ + EV +++M+ +G+ P
Sbjct: 1336 GKAGRLDDAMKLFQEMETLRCIPSVVTYNTIIKALFESKSRASEVPSWFERMKESGISPS 1395
Query: 271 VVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDA--------------- 315
+Y++LI+ + K R E+A+ + EEM + G P AY L+DA
Sbjct: 1396 SFTYSILIDGFCKTNRMEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLACELFQ 1455
Query: 316 -------------FAI-------SGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNAS 355
+A+ +G +D A +F M + C+PD+ +Y ++S
Sbjct: 1456 ELKENCGSSSARVYAVMIKHLGKAGRLDDAINMFDEMNKLGCAPDVYAYNALMSGLARTG 1515
Query: 356 DMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFT 415
++ A RR+++ G +P++ +Y ++ G AK + ME+ M+ + ++P+ +
Sbjct: 1516 MLDEALSTMRRMQEHGCIPDINSYNIILNGLAKTGGPHRAMEMLSNMKQSTVRPDVVSYN 1575
Query: 416 TIMDAYGKNKDFDSAVVWYKEMESCGF 442
T++ A F+ A KEM + GF
Sbjct: 1576 TVLGALSHAGMFEEASKLMKEMNTLGF 1602
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 95/394 (24%), Positives = 185/394 (46%), Gaps = 15/394 (3%)
Query: 94 FNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYA-PSVVSHTALMEAYGRGGRYKNAEA 152
+N M +++ +G + K ++ + M+ +G+ P V+++AL+ A+ + GR +A
Sbjct: 1187 YNSMIIMLM-----HEGQYEKVHQLYNEMSTEGHCFPDTVTYSALISAFCKLGRRDSAIQ 1241
Query: 153 IFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIY 212
+ M+ G +P+ Y +++ LF KF +A + +PD + +I
Sbjct: 1242 LLNEMKEIGMQPTTKIYTMLIALFF---KFNDAHGALSLFEEMRHQYCRPDVFTYTELIR 1298
Query: 213 MYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSF---ETNYKEVSKIYDQMQRAGLQP 269
KAG ++A F M G + TV N++++F + K++ +M+ P
Sbjct: 1299 GLGKAGRIDEAYHFFCEMQREGCRPDTVFMNNMINFLGKAGRLDDAMKLFQEMETLRCIP 1358
Query: 270 DVVSYALLINAYGKAR-REEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTV 328
VV+Y +I A +++ R E + FE M ++G+ P+ Y+IL+D F + +++A +
Sbjct: 1359 SVVTYNTIIKALFESKSRASEVPSWFERMKESGISPSSFTYSILIDGFCKTNRMEKAMML 1418
Query: 329 FKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAK 388
+ M P +Y +++ A A + A + F+ LK++ + Y +IK K
Sbjct: 1419 LEEMDEKGFPPCPAAYCSLIDALGKAKRYDLACELFQELKENCGSSSARVYAVMIKHLGK 1478
Query: 389 VNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKA 448
L+ + ++D+M G P+ + +M + D A+ + M+ G PD +
Sbjct: 1479 AGRLDDAINMFDEMNKLGCAPDVYAYNALMSGLARTGMLDEALSTMRRMQEHGCIPDINS 1538
Query: 449 KNILLS-LAKTADERNEANELLGNFNHPNNEPGI 481
NI+L+ LAKT + A E+L N P +
Sbjct: 1539 YNIILNGLAKTGGP-HRAMEMLSNMKQSTVRPDV 1571
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 103/426 (24%), Positives = 187/426 (43%), Gaps = 47/426 (11%)
Query: 77 NVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTA 136
NV + W + ++ + ++ LI + + K++ M + VV+ T
Sbjct: 1094 NVKMQFFRWAAKRRNYEHDTSTYMALIHCLEVVEQYGEMWKMIQEMVRNPIC--VVTPTE 1151
Query: 137 L---MEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLL 193
L + G + A IF ++++ +P A Y ++ + + ++++ +++ +
Sbjct: 1152 LSDVVRMLGNAKMVRQAITIFYQIKTRKCQPIAQAYNSMIIMLMHEGQYEKVHQLYNEMS 1211
Query: 194 DEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYK 253
E PD + +I + K G + A +L M E G+Q +T Y L++ +
Sbjct: 1212 TEGHC--FPDTVTYSALISAFCKLGRRDSAIQLLNEMKEIGMQPTTKIYTMLIALFFKFN 1269
Query: 254 EVS---KIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYN 310
+ ++++M+ +PDV +Y LI GKA R +EA F EM G RP N
Sbjct: 1270 DAHGALSLFEEMRHQYCRPDVFTYTELIRGLGKAGRIDEAYHFFCEMQREGCRPDTVFMN 1329
Query: 311 ILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSA-YVNASDMEGAEKFFRRLKQ 369
+++ +G +D A +F+ M RC P + +Y T++ A + + S +F R+K+
Sbjct: 1330 NMINFLGKAGRLDDAMKLFQEMETLRCIPSVVTYNTIIKALFESKSRASEVPSWFERMKE 1389
Query: 370 DGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDS 429
G P+ TY LI G+ K N +EK M + ++M G P + +++DA GK K +D
Sbjct: 1390 SGISPSSFTYSILIDGFCKTNRMEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDL 1449
Query: 430 AVVWYKEM-ESCG----------------------------------FPPDQKAKNILLS 454
A ++E+ E+CG PD A N L+S
Sbjct: 1450 ACELFQELKENCGSSSARVYAVMIKHLGKAGRLDDAINMFDEMNKLGCAPDVYAYNALMS 1509
Query: 455 -LAKTA 459
LA+T
Sbjct: 1510 GLARTG 1515
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 85/325 (26%), Positives = 150/325 (46%), Gaps = 5/325 (1%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
LI GK G ++A M ++G P V ++ G+ GR +A +F+ M++
Sbjct: 1296 LIRGLGKAGRIDEAYHFFCEMQREGCRPDTVFMNNMINFLGKAGRLDDAMKLFQEMETLR 1355
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
PS +TY I+K E+ A EV ++S + P + ++I + K E
Sbjct: 1356 CIPSVVTYNTIIKALFESKS--RASEVPSWFERMKESGISPSSFTYSILIDGFCKTNRME 1413
Query: 222 KARKLFALMAERGVQQSTVTYNSL---MSFETNYKEVSKIYDQMQRAGLQPDVVSYALLI 278
KA L M E+G Y SL + Y +++ +++ YA++I
Sbjct: 1414 KAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLACELFQELKENCGSSSARVYAVMI 1473
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCS 338
GKA R ++A+ +F+EM G P AYN L+ A +GM+D+A + + M+ C
Sbjct: 1474 KHLGKAGRLDDAINMFDEMNKLGCAPDVYAYNALMSGLARTGMLDEALSTMRRMQEHGCI 1533
Query: 339 PDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEI 398
PDI SY +L+ A + +KQ P+V++Y T++ + E+ ++
Sbjct: 1534 PDINSYNIILNGLAKTGGPHRAMEMLSNMKQSTVRPDVVSYNTVLGALSHAGMFEEASKL 1593
Query: 399 YDKMRVNGIKPNQTIFTTIMDAYGK 423
+M G + + +++I++A GK
Sbjct: 1594 MKEMNTLGFEYDLITYSSILEAIGK 1618
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 81/295 (27%), Positives = 142/295 (48%), Gaps = 9/295 (3%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEA-YGRGGRYKNAEAIFRRMQSS 160
+I GK G + A K+ M PSVV++ +++A + R + F RM+ S
Sbjct: 1331 MINFLGKAGRLDDAMKLFQEMETLRCIPSVVTYNTIIKALFESKSRASEVPSWFERMKES 1390
Query: 161 GPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDE-EKSPLKPDQKMFHMMIYMYKKAGG 219
G PS+ TY I++ F + N+ ++A M LL+E ++ P + +I KA
Sbjct: 1391 GISPSSFTYSILIDGFCKTNRMEKA----MMLLEEMDEKGFPPCPAAYCSLIDALGKAKR 1446
Query: 220 YEKARKLFALMAERGVQQSTVTYNSLMSF---ETNYKEVSKIYDQMQRAGLQPDVVSYAL 276
Y+ A +LF + E S Y ++ + ++D+M + G PDV +Y
Sbjct: 1447 YDLACELFQELKENCGSSSARVYAVMIKHLGKAGRLDDAINMFDEMNKLGCAPDVYAYNA 1506
Query: 277 LINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDR 336
L++ + +EAL+ M + G P +YNI+L+ A +G +A + M++
Sbjct: 1507 LMSGLARTGMLDEALSTMRRMQEHGCIPDINSYNIILNGLAKTGGPHRAMEMLSNMKQST 1566
Query: 337 CSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNN 391
PD+ SY T+L A +A E A K + + GF ++ITY ++++ KV++
Sbjct: 1567 VRPDVVSYNTVLGALSHAGMFEEASKLMKEMNTLGFEYDLITYSSILEAIGKVDH 1621
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/245 (24%), Positives = 114/245 (46%), Gaps = 37/245 (15%)
Query: 80 SEVLEWLR--IQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTAL 137
SEV W +S + + +LI + K KA +L M++KG+ P ++ +L
Sbjct: 1378 SEVPSWFERMKESGISPSSFTYSILIDGFCKTNRMEKAMMLLEEMDEKGFPPCPAAYCSL 1437
Query: 138 MEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILK-------------LFVEANKFKE 184
++A G+ RY A +F+ ++ + SA Y +++K +F E NK
Sbjct: 1438 IDALGKAKRYDLACELFQELKENCGSSSARVYAVMIKHLGKAGRLDDAINMFDEMNKLGC 1497
Query: 185 AEEVF-----------MTLLDEEKSPLK--------PDQKMFHMMIYMYKKAGGYEKARK 225
A +V+ +LDE S ++ PD +++++ K GG +A +
Sbjct: 1498 APDVYAYNALMSGLARTGMLDEALSTMRRMQEHGCIPDINSYNIILNGLAKTGGPHRAME 1557
Query: 226 LFALMAERGVQQSTVTYNSLM---SFETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYG 282
+ + M + V+ V+YN+++ S ++E SK+ +M G + D+++Y+ ++ A G
Sbjct: 1558 MLSNMKQSTVRPDVVSYNTVLGALSHAGMFEEASKLMKEMNTLGFEYDLITYSSILEAIG 1617
Query: 283 KARRE 287
K E
Sbjct: 1618 KVDHE 1622
>gi|356529489|ref|XP_003533323.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
mitochondrial-like [Glycine max]
Length = 550
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 109/422 (25%), Positives = 191/422 (45%), Gaps = 11/422 (2%)
Query: 37 QIEEVGSAVAVLRSERTRGQPLPKDLVLGTLVRLKQLKKWNVVSEVLEWL--RIQSWWDF 94
+ +G A +VL RG L + L T+ +K L V + LE+ + +
Sbjct: 125 HLGHMGFAFSVLGMVLKRGYQL-NAITLTTI--MKGLCINGEVRKALEFHDSVVAQGFLL 181
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
+E+ + LI K G +A ++L M + P+VV + +++ + G A ++
Sbjct: 182 DEVTYGTLINGLCKIGLTREAFELLHKMEGQVVRPNVVIYNMIVDGLCKDGLVTEARDLY 241
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
+ G P TY ++ F +++E + ++D + + ++++I
Sbjct: 242 SDVVGRGIDPDVFTYTCLIHGFCGLGQWREVTRLLCDMVDRN---VNLNVYTYNILIDAL 298
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVS---KIYDQMQRAGLQPDV 271
K G KA + LM ERG + VT+N+LMS Y +V K++D G+ PDV
Sbjct: 299 CKKGMLGKAHDMRNLMIERGQRPDLVTFNTLMSGYCLYNDVVEARKLFDTFAECGITPDV 358
Query: 272 VSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKC 331
SY +LI Y K R +EAL++F +M + P Y+ L+D SG + A +F
Sbjct: 359 WSYNILIIGYCKNNRIDEALSLFNKMNYKKLAPNIVTYSSLIDGLCKSGRISYAWELFSA 418
Query: 332 MRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNN 391
+ SP++ +Y ML A ++ A + F + + G PNV +Y LI GY K
Sbjct: 419 IHDGGPSPNVITYNIMLDALCKIQLVDKAIELFNLMFERGLTPNVSSYNILINGYCKSKR 478
Query: 392 LEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNI 451
+++ M ++++M + P+ + ++D K+ A + M G P D NI
Sbjct: 479 IDEAMNLFEEMHRRNLVPDSVTYNCLIDGLCKSGRISHAWELFNVMHDGGPPVDVITYNI 538
Query: 452 LL 453
L
Sbjct: 539 LF 540
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 112/507 (22%), Positives = 219/507 (43%), Gaps = 52/507 (10%)
Query: 15 KVEVFKDAADEAGKKNWRRLMNQIEEVGSAVAVLRSERTRGQPLPK----DLVLGTLVRL 70
K VF ++ K+N ++ + + + AVA+ T PLP +++LG++V++
Sbjct: 34 KFSVFLRFFSDSQKQNAKK-KSGFDAIDDAVALFTRLITM-HPLPSVVEFNMILGSIVKM 91
Query: 71 KQLKKWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPS 130
K +S+ + I + + +LI Y G A VL + K+GY +
Sbjct: 92 KHYPTAISLSKQMGLRGITP----SIVTLSILINCYCHLGHMGFAFSVLGMVLKRGYQLN 147
Query: 131 VVSHTALMEA----------------------------YG-------RGGRYKNAEAIFR 155
++ T +M+ YG + G + A +
Sbjct: 148 AITLTTIMKGLCINGEVRKALEFHDSVVAQGFLLDEVTYGTLINGLCKIGLTREAFELLH 207
Query: 156 RMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYK 215
+M+ RP+ + Y +I+ + EA +++ D + PD + +I+ +
Sbjct: 208 KMEGQVVRPNVVIYNMIVDGLCKDGLVTEARDLYS---DVVGRGIDPDVFTYTCLIHGFC 264
Query: 216 KAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSKIYDQ---MQRAGLQPDVV 272
G + + +L M +R V + TYN L+ + K +D M G +PD+V
Sbjct: 265 GLGQWREVTRLLCDMVDRNVNLNVYTYNILIDALCKKGMLGKAHDMRNLMIERGQRPDLV 324
Query: 273 SYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCM 332
++ L++ Y EA +F+ + G+ P +YNIL+ + + +D+A ++F M
Sbjct: 325 TFNTLMSGYCLYNDVVEARKLFDTFAECGITPDVWSYNILIIGYCKNNRIDEALSLFNKM 384
Query: 333 RRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNL 392
+ +P+I +Y++++ + + A + F + G PNVITY ++ K+ +
Sbjct: 385 NYKKLAPNIVTYSSLIDGLCKSGRISYAWELFSAIHDGGPSPNVITYNIMLDALCKIQLV 444
Query: 393 EKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNIL 452
+K +E+++ M G+ PN + + +++ Y K+K D A+ ++EM PD N L
Sbjct: 445 DKAIELFNLMFERGLTPNVSSYNILINGYCKSKRIDEAMNLFEEMHRRNLVPDSVTYNCL 504
Query: 453 LSLAKTADERNEANELLGNFNHPNNEP 479
+ + + A EL N H P
Sbjct: 505 IDGLCKSGRISHAWELF-NVMHDGGPP 530
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 68/297 (22%), Positives = 142/297 (47%), Gaps = 6/297 (2%)
Query: 99 FLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQ 158
+ LI + G + + ++L M + +V ++ L++A + G A + M
Sbjct: 256 YTCLIHGFCGLGQWREVTRLLCDMVDRNVNLNVYTYNILIDALCKKGMLGKAHDMRNLMI 315
Query: 159 SSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAG 218
G RP +T+ ++ + N EA ++F T + + PD ++++I Y K
Sbjct: 316 ERGQRPDLVTFNTLMSGYCLYNDVVEARKLFDTF---AECGITPDVWSYNILIIGYCKNN 372
Query: 219 GYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVS---KIYDQMQRAGLQPDVVSYA 275
++A LF M + + + VTY+SL+ +S +++ + G P+V++Y
Sbjct: 373 RIDEALSLFNKMNYKKLAPNIVTYSSLIDGLCKSGRISYAWELFSAIHDGGPSPNVITYN 432
Query: 276 LLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRD 335
++++A K + ++A+ +F M + G+ P +YNIL++ + S +D+A +F+ M R
Sbjct: 433 IMLDALCKIQLVDKAIELFNLMFERGLTPNVSSYNILINGYCKSKRIDEAMNLFEEMHRR 492
Query: 336 RCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNL 392
PD +Y ++ + + A + F + G +VITY L ++K+ ++
Sbjct: 493 NLVPDSVTYNCLIDGLCKSGRISHAWELFNVMHDGGPPVDVITYNILFDAFSKIQHV 549
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 84/346 (24%), Positives = 139/346 (40%), Gaps = 10/346 (2%)
Query: 149 NAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKS--PLKPDQKM 206
+A A+F R+ + P PS + + +IL V+ + A L ++ + P
Sbjct: 61 DAVALFTRLITMHPLPSVVEFNMILGSIVKMKHYPTAIS-----LSKQMGLRGITPSIVT 115
Query: 207 FHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSK---IYDQMQ 263
++I Y G A + ++ +RG Q + +T ++M EV K +D +
Sbjct: 116 LSILINCYCHLGHMGFAFSVLGMVLKRGYQLNAITLTTIMKGLCINGEVRKALEFHDSVV 175
Query: 264 RAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVD 323
G D V+Y LIN K EA + +M VRP YN+++D G+V
Sbjct: 176 AQGFLLDEVTYGTLINGLCKIGLTREAFELLHKMEGQVVRPNVVIYNMIVDGLCKDGLVT 235
Query: 324 QARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLI 383
+AR ++ + PD+ +YT ++ + + + NV TY LI
Sbjct: 236 EARDLYSDVVGRGIDPDVFTYTCLIHGFCGLGQWREVTRLLCDMVDRNVNLNVYTYNILI 295
Query: 384 KGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFP 443
K L K ++ + M G +P+ F T+M Y D A + CG
Sbjct: 296 DALCKKGMLGKAHDMRNLMIERGQRPDLVTFNTLMSGYCLYNDVVEARKLFDTFAECGIT 355
Query: 444 PDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGINGLSISVD 489
PD + NIL+ + +EA L N+ P I S +D
Sbjct: 356 PDVWSYNILIIGYCKNNRIDEALSLFNKMNYKKLAPNIVTYSSLID 401
>gi|297739257|emb|CBI28908.3| unnamed protein product [Vitis vinifera]
Length = 658
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 98/384 (25%), Positives = 181/384 (47%), Gaps = 14/384 (3%)
Query: 91 WWDFNEMDFLMLITAY-------GKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGR 143
WW + +++ I Y DF++ + +KG+ +V + +L+ ++G
Sbjct: 143 WWAGKQKNYIHKIECYVSLIDVLSLSSDFDRVRCIFGEFKEKGFLMTVFAANSLIRSFGA 202
Query: 144 GGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPD 203
G + ++RRM+ SG PS T+ +L V + + AE VF + E + PD
Sbjct: 203 LGMVEELLWVWRRMKESGIEPSLYTFNFLLNGLVNSMFIESAERVFEVM---ECGKIGPD 259
Query: 204 QKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSF---ETNYKEVSKIYD 260
++ MI Y KAG +KA + F M +R ++ +TY +L+ E N+ +Y
Sbjct: 260 VVSYNTMIKGYCKAGNTKKAMEKFTDMEKRNLEPDKITYLTLIQACYSEGNFDSCLHLYQ 319
Query: 261 QMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISG 320
+M+ GL+ +Y+L+I K R E +VFE M G + Y L+DA+ +G
Sbjct: 320 EMEERGLEIPPHAYSLVIGGLCKDGRTVEGSSVFENMNKKGCKANVAIYTALIDAYGKNG 379
Query: 321 MVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYG 380
V++A +F+ M+ + PD +Y +++ + ++ A ++F K + N + Y
Sbjct: 380 NVNEAINLFERMKGEGFEPDDVTYGVIVNGLCKSGRLDEAVEYFEFCKDNEVAVNAMFYS 439
Query: 381 TLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESC 440
+LI G K +++ + +++M G + + ++DA K+ + A+V +K ME
Sbjct: 440 SLIDGLGKAGRVDEAEKFFEEMVERGCPQDSYCYNALIDALAKSGKMEEALVLFKRMEKE 499
Query: 441 GFPPDQKAKNILLSLAKTADERNE 464
G IL+S + RNE
Sbjct: 500 GCDQTVYTYTILIS-GLFKEHRNE 522
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 99/412 (24%), Positives = 170/412 (41%), Gaps = 48/412 (11%)
Query: 93 DFNEMDFLM-------LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGG 145
+F E FLM LI ++G G + V M + G PS+ + L+
Sbjct: 180 EFKEKGFLMTVFAANSLIRSFGALGMVEELLWVWRRMKESGIEPSLYTFNFLLNGLVNSM 239
Query: 146 RYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQK 205
++AE +F M+ P ++Y ++K + +A K+A E F D EK L+PD+
Sbjct: 240 FIESAERVFEVMECGKIGPDVVSYNTMIKGYCKAGNTKKAMEKFT---DMEKRNLEPDKI 296
Query: 206 MFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMS--------------FET- 250
+ +I G ++ L+ M ERG++ Y+ ++ FE
Sbjct: 297 TYLTLIQACYSEGNFDSCLHLYQEMEERGLEIPPHAYSLVIGGLCKDGRTVEGSSVFENM 356
Query: 251 -----------------------NYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARRE 287
N E ++++M+ G +PD V+Y +++N K+ R
Sbjct: 357 NKKGCKANVAIYTALIDAYGKNGNVNEAINLFERMKGEGFEPDDVTYGVIVNGLCKSGRL 416
Query: 288 EEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTM 347
+EA+ FE D V Y+ L+D +G VD+A F+ M C D Y +
Sbjct: 417 DEAVEYFEFCKDNEVAVNAMFYSSLIDGLGKAGRVDEAEKFFEEMVERGCPQDSYCYNAL 476
Query: 348 LSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGI 407
+ A + ME A F+R++++G V TY LI G K + E+ ++++D M GI
Sbjct: 477 IDALAKSGKMEEALVLFKRMEKEGCDQTVYTYTILISGLFKEHRNEEALKLWDLMIDKGI 536
Query: 408 KPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTA 459
P F + + A E+ G P+ ++++ L K
Sbjct: 537 TPTTASFRALSVGLCLSGKVARACKILDELAPMGVIPETAFEDMINVLCKAG 588
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 85/366 (23%), Positives = 161/366 (43%), Gaps = 11/366 (3%)
Query: 61 DLVLGTLVRLKQLKKWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLS 120
+ +L LV ++ V EV+E +I + + + +I Y K G+ KA + +
Sbjct: 229 NFLLNGLVNSMFIESAERVFEVMECGKIGP----DVVSYNTMIKGYCKAGNTKKAMEKFT 284
Query: 121 FMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEAN 180
M K+ P +++ L++A G + + +++ M+ G Y +++ +
Sbjct: 285 DMEKRNLEPDKITYLTLIQACYSEGNFDSCLHLYQEMEERGLEIPPHAYSLVIGGLCKDG 344
Query: 181 KFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTV 240
+ E VF + K K + ++ +I Y K G +A LF M G + V
Sbjct: 345 RTVEGSSVFENM---NKKGCKANVAIYTALIDAYGKNGNVNEAINLFERMKGEGFEPDDV 401
Query: 241 TYNSL---MSFETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEM 297
TY + + E + ++ + + + + Y+ LI+ GKA R +EA FEEM
Sbjct: 402 TYGVIVNGLCKSGRLDEAVEYFEFCKDNEVAVNAMFYSSLIDGLGKAGRVDEAEKFFEEM 461
Query: 298 LDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDM 357
++ G YN L+DA A SG +++A +FK M ++ C + +YT ++S
Sbjct: 462 VERGCPQDSYCYNALIDALAKSGKMEEALVLFKRMEKEGCDQTVYTYTILISGLFKEHRN 521
Query: 358 EGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTI 417
E A K + + G P ++ L G + + +I D++ G+ P +T F +
Sbjct: 522 EEALKLWDLMIDKGITPTTASFRALSVGLCLSGKVARACKILDELAPMGVIP-ETAFEDM 580
Query: 418 MDAYGK 423
++ K
Sbjct: 581 INVLCK 586
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 64/266 (24%), Positives = 118/266 (44%), Gaps = 35/266 (13%)
Query: 237 QSTVTYNSLMSFETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEE 296
+ V+ ++S +++ V I+ + + G V + LI ++G EE L V+
Sbjct: 156 ECYVSLIDVLSLSSDFDRVRCIFGEFKEKGFLMTVFAANSLIRSFGALGMVEELLWVWRR 215
Query: 297 MLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASD 356
M ++G+ P+ +N LL+ S ++ A VF+ M + PD+ SY TM+ Y A +
Sbjct: 216 MKESGIEPSLYTFNFLLNGLVNSMFIESAERVFEVMECGKIGPDVVSYNTMIKGYCKAGN 275
Query: 357 MEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGI--------- 407
+ A + F +++ P+ ITY TLI+ N + + +Y +M G+
Sbjct: 276 TKKAMEKFTDMEKRNLEPDKITYLTLIQACYSEGNFDSCLHLYQEMEERGLEIPPHAYSL 335
Query: 408 --------------------------KPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCG 441
K N I+T ++DAYGKN + + A+ ++ M+ G
Sbjct: 336 VIGGLCKDGRTVEGSSVFENMNKKGCKANVAIYTALIDAYGKNGNVNEAINLFERMKGEG 395
Query: 442 FPPDQKAKNILLSLAKTADERNEANE 467
F PD ++++ + +EA E
Sbjct: 396 FEPDDVTYGVIVNGLCKSGRLDEAVE 421
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 29/137 (21%), Positives = 63/137 (45%)
Query: 343 SYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKM 402
Y +++ +SD + F K+ GF+ V +LI+ + + +E+++ ++ +M
Sbjct: 157 CYVSLIDVLSLSSDFDRVRCIFGEFKEKGFLMTVFAANSLIRSFGALGMVEELLWVWRRM 216
Query: 403 RVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADER 462
+ +GI+P+ F +++ + +SA ++ ME PD + N ++ A
Sbjct: 217 KESGIEPSLYTFNFLLNGLVNSMFIESAERVFEVMECGKIGPDVVSYNTMIKGYCKAGNT 276
Query: 463 NEANELLGNFNHPNNEP 479
+A E + N EP
Sbjct: 277 KKAMEKFTDMEKRNLEP 293
>gi|449515696|ref|XP_004164884.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
mitochondrial-like [Cucumis sativus]
Length = 657
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 108/473 (22%), Positives = 217/473 (45%), Gaps = 24/473 (5%)
Query: 5 APRKFMQ-KRRKVEVFKDAADEAGKKNWRRLMNQIEEVGSAVAVLRSERTRGQPLPKDLV 63
A + F+Q K R VE+ D+ + L+ G A+++LR R G P+
Sbjct: 59 AEQHFLQAKARGVEL-----DQEAYSIFVHLLCLKPNSGYALSLLREMRAAGWIPPEGTF 113
Query: 64 LGTLVRLKQLKKWNVVSEVLEWLRIQ-----SWWDFNEMDFLMLITAYGKQGDFNKAEKV 118
T V +K+ NV E LR++ N L+ Y QG+ A +
Sbjct: 114 --TSVITACVKEGNVA----EALRLKDDMVNCGKSMNLAVATSLMKGYCMQGNLRSALVL 167
Query: 119 LSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVE 178
++ +++ G P+ V+++ L++ + G + A + M++ G R S + IL+ +++
Sbjct: 168 VNEISESGLVPNKVTYSVLIDGCCKNGNIEKAFEFYSEMKTKGIRSSVYSLNSILEGYLK 227
Query: 179 ANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQS 238
++ A +F L+ + + F+ ++ K G +A L+ + +G+ +
Sbjct: 228 CQSWQNAFTMFNDALESGLA----NVFTFNTLLSWLCKEGKMNEACNLWDEVIAKGISPN 283
Query: 239 TVTYNSLM---SFETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFE 295
V+YN+++ + N K+Y +M G P+ V++ +L++ Y K E A ++F
Sbjct: 284 VVSYNNIILGHCRKDNINAACKVYKEMLDNGFTPNAVTFTILMDGYFKKGDIENAFSIFH 343
Query: 296 EMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNAS 355
M DA + PT I++ +G + R +F P Y T++ ++
Sbjct: 344 RMKDANILPTDTTLGIIIKGLCKAGRSFEGRDLFNKFVSQGFVPTCMPYNTIIDGFIKEG 403
Query: 356 DMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFT 415
++ A +R + + G P+ +TY +LI G+ K NN++ +++ + M+ G+K + +
Sbjct: 404 NINLASNVYREMCEVGITPSTVTYTSLIDGFCKGNNIDLALKLLNDMKRKGLKMDIKAYG 463
Query: 416 TIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANEL 468
T++D + K +D SA E+ G P++ N +++ K + EA +L
Sbjct: 464 TLIDGFCKRRDMKSAHELLNELRGAGLSPNRFIYNSMITGFKNMNNVEEAIDL 516
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 102/420 (24%), Positives = 186/420 (44%), Gaps = 55/420 (13%)
Query: 79 VSEVLE-WLRIQSWWD----FNE---------MDFLMLITAYGKQGDFNKAEKVLSFMNK 124
++ +LE +L+ QSW + FN+ F L++ K+G N+A + +
Sbjct: 218 LNSILEGYLKCQSWQNAFTMFNDALESGLANVFTFNTLLSWLCKEGKMNEACNLWDEVIA 277
Query: 125 KGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKE 184
KG +P+VVS+ ++ + R A +++ M +G P+A+T+ I++ + + +
Sbjct: 278 KGISPNVVSYNNIILGHCRKDNINAACKVYKEMLDNGFTPNAVTFTILMDGYFKKGDIEN 337
Query: 185 AEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNS 244
A +F + D + + P ++I KAG + R LF +G + + YN+
Sbjct: 338 AFSIFHRMKD---ANILPTDTTLGIIIKGLCKAGRSFEGRDLFNKFVSQGFVPTCMPYNT 394
Query: 245 LMSF---ETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAG 301
++ E N S +Y +M G+ P V+Y LI+ + K + AL + +M G
Sbjct: 395 IIDGFIKEGNINLASNVYREMCEVGITPSTVTYTSLIDGFCKGNNIDLALKLLNDMKRKG 454
Query: 302 VRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAE 361
++ KAY L+D F C RR DM+ A
Sbjct: 455 LKMDIKAYGTLIDGF--------------CKRR---------------------DMKSAH 479
Query: 362 KFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAY 421
+ L+ G PN Y ++I G+ +NN+E+ +++Y KM GI + +T+++D
Sbjct: 480 ELLNELRGAGLSPNRFIYNSMITGFKNMNNVEEAIDLYKKMVNEGIPCDLKTYTSLIDGL 539
Query: 422 GKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGI 481
K+ A + EM S G PD +A +L++ + A ++L + N N P +
Sbjct: 540 LKSGRLLYASDIHTEMLSKGILPDDRAHTVLINGLCNKGQFENARKILEDMNGKNMIPSV 599
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 91/356 (25%), Positives = 165/356 (46%), Gaps = 6/356 (1%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
+I + ++ + N A KV M G+ P+ V+ T LM+ Y + G +NA +IF RM+ +
Sbjct: 290 IILGHCRKDNINAACKVYKEMLDNGFTPNAVTFTILMDGYFKKGDIENAFSIFHRMKDAN 349
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
P+ T II+K +A + E ++F + + P ++ +I + K G
Sbjct: 350 ILPTDTTLGIIIKGLCKAGRSFEGRDLFNKFVSQ---GFVPTCMPYNTIIDGFIKEGNIN 406
Query: 222 KARKLFALMAERGVQQSTVTYNSLM---SFETNYKEVSKIYDQMQRAGLQPDVVSYALLI 278
A ++ M E G+ STVTY SL+ N K+ + M+R GL+ D+ +Y LI
Sbjct: 407 LASNVYREMCEVGITPSTVTYTSLIDGFCKGNNIDLALKLLNDMKRKGLKMDIKAYGTLI 466
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCS 338
+ + K R + A + E+ AG+ P YN ++ F V++A ++K M +
Sbjct: 467 DGFCKRRDMKSAHELLNELRGAGLSPNRFIYNSMITGFKNMNNVEEAIDLYKKMVNEGIP 526
Query: 339 PDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEI 398
D+ +YT+++ + + + A + G +P+ + LI G E +I
Sbjct: 527 CDLKTYTSLIDGLLKSGRLLYASDIHTEMLSKGILPDDRAHTVLINGLCNKGQFENARKI 586
Query: 399 YDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLS 454
+ M + P+ I+ T++ + K + A + EM G PD +IL++
Sbjct: 587 LEDMNGKNMIPSVLIYNTLIAGHFKEGNLQEAFRLHDEMLDRGLVPDNITYDILVN 642
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 64/264 (24%), Positives = 126/264 (47%), Gaps = 6/264 (2%)
Query: 125 KGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKE 184
+G+ P+ + + +++ + + G A ++R M G PS +TY ++ F + N
Sbjct: 383 QGFVPTCMPYNTIIDGFIKEGNINLASNVYREMCEVGITPSTVTYTSLIDGFCKGNNIDL 442
Query: 185 AEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNS 244
A ++ L D ++ LK D K + +I + K + A +L + G+ + YNS
Sbjct: 443 ALKL---LNDMKRKGLKMDIKAYGTLIDGFCKRRDMKSAHELLNELRGAGLSPNRFIYNS 499
Query: 245 LMS-FET--NYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAG 301
+++ F+ N +E +Y +M G+ D+ +Y LI+ K+ R A + EML G
Sbjct: 500 MITGFKNMNNVEEAIDLYKKMVNEGIPCDLKTYTSLIDGLLKSGRLLYASDIHTEMLSKG 559
Query: 302 VRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAE 361
+ P +A+ +L++ G + AR + + M P + Y T+++ + +++ A
Sbjct: 560 ILPDDRAHTVLINGLCNKGQFENARKILEDMNGKNMIPSVLIYNTLIAGHFKEGNLQEAF 619
Query: 362 KFFRRLKQDGFVPNVITYGTLIKG 385
+ + G VP+ ITY L+ G
Sbjct: 620 RLHDEMLDRGLVPDNITYDILVNG 643
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/272 (22%), Positives = 116/272 (42%), Gaps = 4/272 (1%)
Query: 200 LKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSF---ETNYKEVS 256
+ P + ++++ + +AR+L M GV T + ++ E N E
Sbjct: 1 MTPSIQCMNILLTAMVRKNMTCEARELHNKMLLVGVTGDCFTLHVMLRACLKEGNILEAE 60
Query: 257 KIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAF 316
+ + Q + G++ D +Y++ ++ AL++ EM AG P + ++ A
Sbjct: 61 QHFLQAKARGVELDQEAYSIFVHLLCLKPNSGYALSLLREMRAAGWIPPEGTFTSVITAC 120
Query: 317 AISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNV 376
G V +A + M S ++ T+++ Y ++ A + + G VPN
Sbjct: 121 VKEGNVAEALRLKDDMVNCGKSMNLAVATSLMKGYCMQGNLRSALVLVNEISESGLVPNK 180
Query: 377 ITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKE 436
+TY LI G K N+EK E Y +M+ GI+ + +I++ Y K + + +A + +
Sbjct: 181 VTYSVLIDGCCKNGNIEKAFEFYSEMKTKGIRSSVYSLNSILEGYLKCQSWQNAFTMFND 240
Query: 437 MESCGFPPDQKAKNILLSLAKTADERNEANEL 468
G + N LLS + NEA L
Sbjct: 241 ALESGL-ANVFTFNTLLSWLCKEGKMNEACNL 271
>gi|226533082|ref|NP_001141414.1| uncharacterized protein LOC100273524 [Zea mays]
gi|194704512|gb|ACF86340.1| unknown [Zea mays]
Length = 637
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 85/327 (25%), Positives = 170/327 (51%), Gaps = 8/327 (2%)
Query: 99 FLMLITAYGKQGDFNKAEKVLSFMNKKGYA-PSVVSHTALMEAYGRGGRYKNAEAIFRRM 157
F LI YG G ++++V M +G P++ ++ L++A+ + A + +M
Sbjct: 175 FNTLIKGYGIVGKPEESQRVFDMMGVEGSVRPNLTTYNILVKAWCDHRNLEEAWGVVGKM 234
Query: 158 QSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKA 217
Q+ G P +TY I + ++ AEE L+ E ++ ++ ++ + ++I Y +
Sbjct: 235 QAGGFEPDIVTYNTIASAYANNDETWRAEE----LIVEIQTRVRTSERTWGIIIGGYCRE 290
Query: 218 GGYEKARKLFALMAERGVQQSTVTYNSLMS--FETN-YKEVSKIYDQMQRAGLQPDVVSY 274
G E+A + M + G + V +N+L+ + N V+KI M++ G++PD+V+Y
Sbjct: 291 GRLEEALRCVQQMKDAGSVPNVVIFNTLLKGFLDANDMAAVNKILGLMEKFGIKPDIVTY 350
Query: 275 ALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRR 334
+ +N + + + VF++M++AG+ P + Y+IL F + ++A + M
Sbjct: 351 SHQLNTFSSLGHMAKCMHVFDKMIEAGIEPDPQVYSILAKGFVRAQQPEKAEDLLLQMSH 410
Query: 335 DRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEK 394
P++ ++TT++S + + +DME A + + ++ + G PN+ T+ T I GY++ K
Sbjct: 411 LGLCPNVVTFTTVISGWCSVADMESAMRVYDKMCKSGVYPNLRTFETPIWGYSEQKQPWK 470
Query: 395 MMEIYDKMRVNGIKPNQTIFTTIMDAY 421
E+ MR G+KP Q+ + I DA+
Sbjct: 471 AEEVLQMMRETGVKPKQSTYCLIADAW 497
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 108/464 (23%), Positives = 186/464 (40%), Gaps = 83/464 (17%)
Query: 114 KAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIIL 173
+A V + +G+ PS+V++T L+ A +++ ++ ++ +G RP ++ + ++
Sbjct: 85 QAHSVFKHLMDEGHKPSLVTYTILLTALTNQRMFESIPSLLAEVELAGVRPDSIFFNALI 144
Query: 174 KLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAER 233
FVEA + EA F + + S P F+ +I Y G E+++++F +M
Sbjct: 145 NAFVEAKRMGEAINTFWKM---KHSGCHPTTSTFNTLIKGYGIVGKPEESQRVFDMMGVE 201
Query: 234 G-VQQSTVTYNSLMSF---ETNYKEVSKIYDQMQRAGLQPDVVSY--------------- 274
G V+ + TYN L+ N +E + +MQ G +PD+V+Y
Sbjct: 202 GSVRPNLTTYNILVKAWCDHRNLEEAWGVVGKMQAGGFEPDIVTYNTIASAYANNDETWR 261
Query: 275 -------------------ALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDA 315
++I Y + R EEAL ++M DAG P +N LL
Sbjct: 262 AEELIVEIQTRVRTSERTWGIIIGGYCREGRLEEALRCVQQMKDAGSVPNVVIFNTLLKG 321
Query: 316 FAISGMVDQARTVFKCMRRDRCSPDICSYTTMLS-------------------------- 349
F + + + M + PDI +Y+ L+
Sbjct: 322 FLDANDMAAVNKILGLMEKFGIKPDIVTYSHQLNTFSSLGHMAKCMHVFDKMIEAGIEPD 381
Query: 350 ---------AYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYD 400
+V A E AE ++ G PNV+T+ T+I G+ V ++E M +YD
Sbjct: 382 PQVYSILAKGFVRAQQPEKAEDLLLQMSHLGLCPNVVTFTTVISGWCSVADMESAMRVYD 441
Query: 401 KMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTAD 460
KM +G+ PN F T + Y + K A + M G P Q ++ K
Sbjct: 442 KMCKSGVYPNLRTFETPIWGYSEQKQPWKAEEVLQMMRETGVKPKQSTYCLIADAWK--- 498
Query: 461 ERNEANELLGNFNHPNNEPGINGLSISVDEEDDDDDDDEDDDDN 504
A L N N+ N P +D +D+ + +D+N
Sbjct: 499 ----AVGLTENINNSNGSPNGPYAIEKLDHSNDNCNVRISEDNN 538
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 88/371 (23%), Positives = 168/371 (45%), Gaps = 10/371 (2%)
Query: 116 EKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKL 175
+++ + K SV++ T M A + A ++F+ + G +PS +TY I+L
Sbjct: 52 QQLCTTCAKGHTCQSVINRTRQMRALIDSKKPYQAHSVFKHLMDEGHKPSLVTYTILLTA 111
Query: 176 FVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGV 235
F E + L + E + ++PD F+ +I + +A +A F M G
Sbjct: 112 LTNQRMF---ESIPSLLAEVELAGVRPDSIFFNALINAFVEAKRMGEAINTFWKMKHSGC 168
Query: 236 QQSTVTYNSLM---SFETNYKEVSKIYDQMQRAG-LQPDVVSYALLINAYGKARREEEAL 291
+T T+N+L+ +E +++D M G ++P++ +Y +L+ A+ R EEA
Sbjct: 169 HPTTSTFNTLIKGYGIVGKPEESQRVFDMMGVEGSVRPNLTTYNILVKAWCDHRNLEEAW 228
Query: 292 AVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQA-RTVFKCMRRDRCSPDICSYTTMLSA 350
V +M G P YN + A+A + +A + + R R S ++ ++
Sbjct: 229 GVVGKMQAGGFEPDIVTYNTIASAYANNDETWRAEELIVEIQTRVRTSER--TWGIIIGG 286
Query: 351 YVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPN 410
Y +E A + +++K G VPNV+ + TL+KG+ N++ + +I M GIKP+
Sbjct: 287 YCREGRLEEALRCVQQMKDAGSVPNVVIFNTLLKGFLDANDMAAVNKILGLMEKFGIKPD 346
Query: 411 QTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLG 470
++ ++ + + + +M G PD + +IL A + +A +LL
Sbjct: 347 IVTYSHQLNTFSSLGHMAKCMHVFDKMIEAGIEPDPQVYSILAKGFVRAQQPEKAEDLLL 406
Query: 471 NFNHPNNEPGI 481
+H P +
Sbjct: 407 QMSHLGLCPNV 417
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 52/241 (21%), Positives = 116/241 (48%), Gaps = 6/241 (2%)
Query: 86 LRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGG 145
+ IQ+ +E + ++I Y ++G +A + + M G P+VV L++ +
Sbjct: 267 VEIQTRVRTSERTWGIIIGGYCREGRLEEALRCVQQMKDAGSVPNVVIFNTLLKGFLDAN 326
Query: 146 RYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQK 205
I M+ G +P +TY L F + VF +++ + ++PD +
Sbjct: 327 DMAAVNKILGLMEKFGIKPDIVTYSHQLNTFSSLGHMAKCMHVFDKMIE---AGIEPDPQ 383
Query: 206 MFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVS---KIYDQM 262
++ ++ + +A EKA L M+ G+ + VT+ +++S + ++ ++YD+M
Sbjct: 384 VYSILAKGFVRAQQPEKAEDLLLQMSHLGLCPNVVTFTTVISGWCSVADMESAMRVYDKM 443
Query: 263 QRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMV 322
++G+ P++ ++ I Y + ++ +A V + M + GV+P Y ++ DA+ G+
Sbjct: 444 CKSGVYPNLRTFETPIWGYSEQKQPWKAEEVLQMMRETGVKPKQSTYCLIADAWKAVGLT 503
Query: 323 D 323
+
Sbjct: 504 E 504
>gi|359472741|ref|XP_003631192.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g19890-like [Vitis vinifera]
Length = 708
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 91/351 (25%), Positives = 169/351 (48%), Gaps = 7/351 (1%)
Query: 85 WLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRG 144
W ++ N ++F LI KQG +A ++L M ++G+ P+V +HT L++ +
Sbjct: 283 WKMVEMGLAPNVINFTALINGLCKQGSIKQAFELLEEMVRRGWKPNVYTHTTLIDGLCKK 342
Query: 145 GRYKNAEAIFRRM-QSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPD 203
G + A +F ++ +S G +P+ TY ++ + + +K AE M L ++ L P+
Sbjct: 343 GWTEKAFRLFLKLVRSDGYKPNVHTYTAMINGYCKEDKLNRAE---MLLSRMQEQGLVPN 399
Query: 204 QKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSL---MSFETNYKEVSKIYD 260
+ +I + K G + +A +L LM + G + TYN++ + + + E ++ +
Sbjct: 400 TNTYTTLIDGHCKVGNFVRAYELMDLMGKEGFSPNIYTYNAIIDGLCKKGSLDEAYRLLN 459
Query: 261 QMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISG 320
++ GLQ D V+Y +L++ + + +L F +ML G P +Y L+ F
Sbjct: 460 KVSVHGLQADGVTYTILMSVHCRQADTNRSLVFFNKMLKVGFTPDIHSYTTLISTFCRQK 519
Query: 321 MVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYG 380
+ ++ +F+ P +YT+M+ Y + A K F+R+ G P+ ITYG
Sbjct: 520 QMKESERLFEEAVSLGLIPTKKTYTSMICGYCRYGNTSLAVKLFQRMSNHGCAPDSITYG 579
Query: 381 TLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAV 431
LI G K + L+ +YD M G+ P + T+ Y K D +A+
Sbjct: 580 ALISGLCKESKLDDARNLYDAMMDKGLSPCEVTRLTLAYEYCKKDDSSTAI 630
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 84/326 (25%), Positives = 155/326 (47%), Gaps = 8/326 (2%)
Query: 81 EVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKV-LSFMNKKGYAPSVVSHTALME 139
E+LE + ++ W N LI K+G KA ++ L + GY P+V ++TA++
Sbjct: 315 ELLEEM-VRRGWKPNVYTHTTLIDGLCKKGWTEKAFRLFLKLVRSDGYKPNVHTYTAMIN 373
Query: 140 AYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSP 199
Y + + AE + RMQ G P+ TY ++ + F A E+ M L+ +E
Sbjct: 374 GYCKEDKLNRAEMLLSRMQEQGLVPNTNTYTTLIDGHCKVGNFVRAYEL-MDLMGKEG-- 430
Query: 200 LKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSK-- 257
P+ ++ +I K G ++A +L ++ G+Q VTY LMS + ++
Sbjct: 431 FSPNIYTYNAIIDGLCKKGSLDEAYRLLNKVSVHGLQADGVTYTILMSVHCRQADTNRSL 490
Query: 258 -IYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAF 316
+++M + G PD+ SY LI+ + + ++ +E+ +FEE + G+ PT K Y ++ +
Sbjct: 491 VFFNKMLKVGFTPDIHSYTTLISTFCRQKQMKESERLFEEAVSLGLIPTKKTYTSMICGY 550
Query: 317 AISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNV 376
G A +F+ M C+PD +Y ++S S ++ A + + G P
Sbjct: 551 CRYGNTSLAVKLFQRMSNHGCAPDSITYGALISGLCKESKLDDARNLYDAMMDKGLSPCE 610
Query: 377 ITYGTLIKGYAKVNNLEKMMEIYDKM 402
+T TL Y K ++ + + D++
Sbjct: 611 VTRLTLAYEYCKKDDSSTAINVLDRL 636
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 84/368 (22%), Positives = 155/368 (42%), Gaps = 42/368 (11%)
Query: 141 YGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPL 200
+ G+ K A + MQ+ G PS T +L + V + AE +F+ + SP
Sbjct: 164 FAENGKLKEAVNMVVEMQNQGLVPSTQTLNCVLDVAVGMGLVEIAENMFVEMCQRGVSP- 222
Query: 201 KPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSKI-- 258
D F +M+ G +A + M ERG T ++ V+++
Sbjct: 223 --DCVSFKLMVVACCNMGRVLEAERWLNAMVERGFIVDNATCTLIIDAFCQKGYVNRVVG 280
Query: 259 -YDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFA 317
+ +M GL P+V+++ LIN K ++A + EEM+ G +P + L+D
Sbjct: 281 YFWKMVEMGLAPNVINFTALINGLCKQGSIKQAFELLEEMVRRGWKPNVYTHTTLIDGLC 340
Query: 318 ISGMVDQA-RTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQ------- 369
G ++A R K +R D P++ +YT M++ Y + AE R+++
Sbjct: 341 KKGWTEKAFRLFLKLVRSDGYKPNVHTYTAMINGYCKEDKLNRAEMLLSRMQEQGLVPNT 400
Query: 370 ----------------------------DGFVPNVITYGTLIKGYAKVNNLEKMMEIYDK 401
+GF PN+ TY +I G K +L++ + +K
Sbjct: 401 NTYTTLIDGHCKVGNFVRAYELMDLMGKEGFSPNIYTYNAIIDGLCKKGSLDEAYRLLNK 460
Query: 402 MRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADE 461
+ V+G++ + +T +M + + D + ++V++ +M GF PD + L+S +
Sbjct: 461 VSVHGLQADGVTYTILMSVHCRQADTNRSLVFFNKMLKVGFTPDIHSYTTLISTFCRQKQ 520
Query: 462 RNEANELL 469
E+ L
Sbjct: 521 MKESERLF 528
Score = 108 bits (271), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 86/376 (22%), Positives = 170/376 (45%), Gaps = 13/376 (3%)
Query: 97 MDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRR 156
+ F +++ A G +AE+ L+ M ++G+ + T +++A+ + G F +
Sbjct: 225 VSFKLMVVACCNMGRVLEAERWLNAMVERGFIVDNATCTLIIDAFCQKGYVNRVVGYFWK 284
Query: 157 MQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEE-KSPLKPDQKMFHMMIYMYK 215
M G P+ + + ++ + K+A E LL+E + KP+ +I
Sbjct: 285 MVEMGLAPNVINFTALINGLCKQGSIKQAFE----LLEEMVRRGWKPNVYTHTTLIDGLC 340
Query: 216 KAGGYEKARKLFA-LMAERGVQQSTVTYNSLMSF---ETNYKEVSKIYDQMQRAGLQPDV 271
K G EKA +LF L+ G + + TY ++++ E + +MQ GL P+
Sbjct: 341 KKGWTEKAFRLFLKLVRSDGYKPNVHTYTAMINGYCKEDKLNRAEMLLSRMQEQGLVPNT 400
Query: 272 VSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKC 331
+Y LI+ + K A + + M G P YN ++D G +D+A +
Sbjct: 401 NTYTTLIDGHCKVGNFVRAYELMDLMGKEGFSPNIYTYNAIIDGLCKKGSLDEAYRLLNK 460
Query: 332 MRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNN 391
+ D +YT ++S + +D + FF ++ + GF P++ +Y TLI + +
Sbjct: 461 VSVHGLQADGVTYTILMSVHCRQADTNRSLVFFNKMLKVGFTPDIHSYTTLISTFCRQKQ 520
Query: 392 LEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNI 451
+++ ++++ G+ P + +T+++ Y + + AV ++ M + G PD
Sbjct: 521 MKESERLFEEAVSLGLIPTKKTYTSMICGYCRYGNTSLAVKLFQRMSNHGCAPDSITYGA 580
Query: 452 LLS-LAKTA---DERN 463
L+S L K + D RN
Sbjct: 581 LISGLCKESKLDDARN 596
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 77/319 (24%), Positives = 142/319 (44%), Gaps = 14/319 (4%)
Query: 170 QIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFAL 229
Q ++ F E K KEA + +++ + L P + + ++ + G E A +F
Sbjct: 158 QCMVMNFAENGKLKEAVNM---VVEMQNQGLVPSTQTLNCVLDVAVGMGLVEIAENMFVE 214
Query: 230 MAERGVQQSTVTYNSLMSFETNYK---EVSKIYDQMQRAGLQPDVVSYALLINAYGKARR 286
M +RGV V++ ++ N E + + M G D + L+I+A+ +
Sbjct: 215 MCQRGVSPDCVSFKLMVVACCNMGRVLEAERWLNAMVERGFIVDNATCTLIIDAFCQKGY 274
Query: 287 EEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTT 346
+ F +M++ G+ P + L++ G + QA + + M R P++ ++TT
Sbjct: 275 VNRVVGYFWKMVEMGLAPNVINFTALINGLCKQGSIKQAFELLEEMVRRGWKPNVYTHTT 334
Query: 347 MLSAYVNASDMEGAEKFFRRL-KQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVN 405
++ E A + F +L + DG+ PNV TY +I GY K + L + + +M+
Sbjct: 335 LIDGLCKKGWTEKAFRLFLKLVRSDGYKPNVHTYTAMINGYCKEDKLNRAEMLLSRMQEQ 394
Query: 406 GIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEA 465
G+ PN +TT++D + K +F A M GF P+ N ++ +EA
Sbjct: 395 GLVPNTNTYTTLIDGHCKVGNFVRAYELMDLMGKEGFSPNIYTYNAIIDGLCKKGSLDEA 454
Query: 466 NELLGNFNHPNNEPGINGL 484
LL N+ ++GL
Sbjct: 455 YRLL-------NKVSVHGL 466
>gi|356499433|ref|XP_003518545.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g06920-like [Glycine max]
Length = 905
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 96/375 (25%), Positives = 177/375 (47%), Gaps = 8/375 (2%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
+ + F LI G+ G N A + M G P+ V +T+L+ + + GR ++ I+
Sbjct: 480 DSVTFCSLIDGLGRHGKVNDAYMLYEKMLDSGQTPNAVVYTSLIRNFFKCGRKEDGHKIY 539
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSP-LKPDQKMFHMMIYM 213
+ M G P + + +A + ++ +F +E K+ L PD + + ++I+
Sbjct: 540 KEMMHRGCSPDLMLLNNYMDCVFKAGEIEKGRALF----EEIKAQGLTPDVRSYSILIHG 595
Query: 214 YKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSKIY---DQMQRAGLQPD 270
K G + KLF M E+G+ T YN ++ +V+K Y ++M+ GLQP
Sbjct: 596 LVKGGFSKDTYKLFYEMKEQGLHLDTRAYNIVIDGFCKSGKVNKAYQLLEEMKTKGLQPT 655
Query: 271 VVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFK 330
VV+Y +I+ K R +EA +FEE V Y+ L+D F G +D+A + +
Sbjct: 656 VVTYGSVIDGLAKIDRLDEAYMLFEEAKSKAVDLNVVVYSSLIDGFGKVGRIDEAYLILE 715
Query: 331 CMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVN 390
+ + +P+ ++ +L A V A +++ A F+ +K PN +TY ++ G KV
Sbjct: 716 ELMQKGLTPNTYTWNCLLDALVKAEEIDEALVCFQNMKNLKCPPNEVTYSIMVNGLCKVR 775
Query: 391 NLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKN 450
K + +M+ G+KPN +TT++ + + A ++ +S G PD N
Sbjct: 776 KFNKAFVFWQEMQKQGLKPNTITYTTMISGLARVGNVLEAKDLFERFKSSGGIPDSACYN 835
Query: 451 ILLSLAKTADERNEA 465
++ A++ +A
Sbjct: 836 AMIEGLSNANKAMDA 850
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 102/425 (24%), Positives = 182/425 (42%), Gaps = 40/425 (9%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFR------ 155
+I YG G FN+A +L +KG PSV+++ ++ GR G+ + A I
Sbjct: 348 MIMGYGSVGKFNEAYSLLERQKRKGCIPSVIAYNCILTCLGRKGKVEEALRILEAMKMDA 407
Query: 156 ----------------------------RMQSSGPRPSALTYQIILKLFVEANKFKEAEE 187
M+ +G P+ +T I++ +A + EA
Sbjct: 408 APNLTSYNILIDMLCKAGELEAALKVQDSMKEAGLFPNIITVNIMIDRLCKAQRLDEACS 467
Query: 188 VFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMS 247
+F+ L + PD F +I + G A L+ M + G + V Y SL+
Sbjct: 468 IFLGL---DHKVCTPDSVTFCSLIDGLGRHGKVNDAYMLYEKMLDSGQTPNAVVYTSLIR 524
Query: 248 --FETNYKE-VSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRP 304
F+ KE KIY +M G PD++ ++ KA E+ A+FEE+ G+ P
Sbjct: 525 NFFKCGRKEDGHKIYKEMMHRGCSPDLMLLNNYMDCVFKAGEIEKGRALFEEIKAQGLTP 584
Query: 305 THKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFF 364
++Y+IL+ G +F M+ D +Y ++ + + + A +
Sbjct: 585 DVRSYSILIHGLVKGGFSKDTYKLFYEMKEQGLHLDTRAYNIVIDGFCKSGKVNKAYQLL 644
Query: 365 RRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKN 424
+K G P V+TYG++I G AK++ L++ ++++ + + N ++++++D +GK
Sbjct: 645 EEMKTKGLQPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKAVDLNVVVYSSLIDGFGKV 704
Query: 425 KDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGINGL 484
D A + +E+ G P+ N LL A+E +EA N + P
Sbjct: 705 GRIDEAYLILEELMQKGLTPNTYTWNCLLDALVKAEEIDEALVCFQNMKNLKCPPNEVTY 764
Query: 485 SISVD 489
SI V+
Sbjct: 765 SIMVN 769
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 81/382 (21%), Positives = 176/382 (46%), Gaps = 6/382 (1%)
Query: 101 MLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSS 160
++I K ++A + ++ K P V+ +L++ GR G+ +A ++ +M S
Sbjct: 451 IMIDRLCKAQRLDEACSIFLGLDHKVCTPDSVTFCSLIDGLGRHGKVNDAYMLYEKMLDS 510
Query: 161 GPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGY 220
G P+A+ Y +++ F + + ++ +++ ++ SP D + + + KAG
Sbjct: 511 GQTPNAVVYTSLIRNFFKCGRKEDGHKIYKEMMHRGCSP---DLMLLNNYMDCVFKAGEI 567
Query: 221 EKARKLFALMAERGVQQSTVTYNSLMSFETN---YKEVSKIYDQMQRAGLQPDVVSYALL 277
EK R LF + +G+ +Y+ L+ K+ K++ +M+ GL D +Y ++
Sbjct: 568 EKGRALFEEIKAQGLTPDVRSYSILIHGLVKGGFSKDTYKLFYEMKEQGLHLDTRAYNIV 627
Query: 278 INAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRC 337
I+ + K+ + +A + EEM G++PT Y ++D A +D+A +F+ +
Sbjct: 628 IDGFCKSGKVNKAYQLLEEMKTKGLQPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKAV 687
Query: 338 SPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMME 397
++ Y++++ + ++ A L Q G PN T+ L+ K +++ +
Sbjct: 688 DLNVVVYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNTYTWNCLLDALVKAEEIDEALV 747
Query: 398 IYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAK 457
+ M+ PN+ ++ +++ K + F+ A V+++EM+ G P+ ++S
Sbjct: 748 CFQNMKNLKCPPNEVTYSIMVNGLCKVRKFNKAFVFWQEMQKQGLKPNTITYTTMISGLA 807
Query: 458 TADERNEANELLGNFNHPNNEP 479
EA +L F P
Sbjct: 808 RVGNVLEAKDLFERFKSSGGIP 829
Score = 125 bits (314), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 82/353 (23%), Positives = 157/353 (44%), Gaps = 7/353 (1%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
+++ F +I K ++A ++ ++ P V ++ ++ YG G++ A ++
Sbjct: 306 DDVTFTSMIGVLCKAERVDEAVELFEELDSNKSVPCVYAYNTMIMGYGSVGKFNEAYSLL 365
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
R + G PS + Y IL K +EA + +L+ K P+ ++++I M
Sbjct: 366 ERQKRKGCIPSVIAYNCILTCLGRKGKVEEA----LRILEAMKMDAAPNLTSYNILIDML 421
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSL---MSFETNYKEVSKIYDQMQRAGLQPDV 271
KAG E A K+ M E G+ + +T N + + E I+ + PD
Sbjct: 422 CKAGELEAALKVQDSMKEAGLFPNIITVNIMIDRLCKAQRLDEACSIFLGLDHKVCTPDS 481
Query: 272 VSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKC 331
V++ LI+ G+ + +A ++E+MLD+G P Y L+ F G + ++K
Sbjct: 482 VTFCSLIDGLGRHGKVNDAYMLYEKMLDSGQTPNAVVYTSLIRNFFKCGRKEDGHKIYKE 541
Query: 332 MRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNN 391
M CSPD+ + A ++E F +K G P+V +Y LI G K
Sbjct: 542 MMHRGCSPDLMLLNNYMDCVFKAGEIEKGRALFEEIKAQGLTPDVRSYSILIHGLVKGGF 601
Query: 392 LEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPP 444
+ +++ +M+ G+ + + ++D + K+ + A +EM++ G P
Sbjct: 602 SKDTYKLFYEMKEQGLHLDTRAYNIVIDGFCKSGKVNKAYQLLEEMKTKGLQP 654
Score = 112 bits (280), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 97/433 (22%), Positives = 185/433 (42%), Gaps = 58/433 (13%)
Query: 57 PLPKDLVLGTLVRLKQLKKWNVVSEVLEWL-----RIQSWWDFNEMDFLMLITAYGKQGD 111
P P +LV+G + RLK ++ V W+ ++ S +N + LM + +
Sbjct: 97 PQP-ELVVGVIRRLKDVR---VALHYFRWVERKTKQLHSPEAYNALLMLM-----ARTRN 147
Query: 112 FNKAEKVLSFMNKKGYAP----------SVVSHTALMEAYG-----RGGRYKNAEA---- 152
E++L M+ G+ P S V L EA+G R +++ A +
Sbjct: 148 LEYLEQILEEMSMAGFGPSNNTCIEMVASFVKSRKLREAFGVIETMRKFKFRPAYSAYTT 207
Query: 153 ----------------IFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEE 196
+ R+MQ G + + ++ +F + A ++LLDE
Sbjct: 208 LIGALSAAHEADPMLTLLRQMQEIGYEVTVHLFTTLICVFAREGRVDAA----LSLLDEM 263
Query: 197 KS-PLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYK-- 253
KS D ++++ I + K G + A K F + +G+ VT+ S++ +
Sbjct: 264 KSNSFNADLVLYNVCIDCFGKVGKVDMAWKFFHELKSQGLVPDDVTFTSMIGVLCKAERV 323
Query: 254 -EVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNIL 312
E ++++++ P V +Y +I YG + EA ++ E G P+ AYN +
Sbjct: 324 DEAVELFEELDSNKSVPCVYAYNTMIMGYGSVGKFNEAYSLLERQKRKGCIPSVIAYNCI 383
Query: 313 LDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGF 372
L G V++A + + M+ D +P++ SY ++ A ++E A K +K+ G
Sbjct: 384 LTCLGRKGKVEEALRILEAMKMDA-APNLTSYNILIDMLCKAGELEAALKVQDSMKEAGL 442
Query: 373 VPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVV 432
PN+IT +I K L++ I+ + P+ F +++D G++ + A +
Sbjct: 443 FPNIITVNIMIDRLCKAQRLDEACSIFLGLDHKVCTPDSVTFCSLIDGLGRHGKVNDAYM 502
Query: 433 WYKEMESCGFPPD 445
Y++M G P+
Sbjct: 503 LYEKMLDSGQTPN 515
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 78/360 (21%), Positives = 153/360 (42%), Gaps = 9/360 (2%)
Query: 123 NKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKF 182
K+ ++P ++ AL+ R + E I M +G PS T ++ FV++ K
Sbjct: 126 TKQLHSPE--AYNALLMLMARTRNLEYLEQILEEMSMAGFGPSNNTCIEMVASFVKSRKL 183
Query: 183 KEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTY 242
+EA V T+ K +P + +I A + L M E G + + +
Sbjct: 184 REAFGVIETM---RKFKFRPAYSAYTTLIGALSAAHEADPMLTLLRQMQEIGYEVTVHLF 240
Query: 243 NSLMSF---ETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLD 299
+L+ E + D+M+ D+V Y + I+ +GK + + A F E+
Sbjct: 241 TTLICVFAREGRVDAALSLLDEMKSNSFNADLVLYNVCIDCFGKVGKVDMAWKFFHELKS 300
Query: 300 AGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEG 359
G+ P + ++ + VD+A +F+ + ++ P + +Y TM+ Y +
Sbjct: 301 QGLVPDDVTFTSMIGVLCKAERVDEAVELFEELDSNKSVPCVYAYNTMIMGYGSVGKFNE 360
Query: 360 AEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMD 419
A R K+ G +P+VI Y ++ + +E+ + I + M+++ PN T + ++D
Sbjct: 361 AYSLLERQKRKGCIPSVIAYNCILTCLGRKGKVEEALRILEAMKMDA-APNLTSYNILID 419
Query: 420 AYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEP 479
K + ++A+ M+ G P+ NI++ A +EA + +H P
Sbjct: 420 MLCKAGELEAALKVQDSMKEAGLFPNIITVNIMIDRLCKAQRLDEACSIFLGLDHKVCTP 479
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/244 (23%), Positives = 113/244 (46%), Gaps = 5/244 (2%)
Query: 231 AERGVQQ--STVTYNSL---MSFETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKAR 285
ER +Q S YN+L M+ N + + +I ++M AG P + ++ ++ K+R
Sbjct: 122 VERKTKQLHSPEAYNALLMLMARTRNLEYLEQILEEMSMAGFGPSNNTCIEMVASFVKSR 181
Query: 286 REEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYT 345
+ EA V E M RP + AY L+ A + + D T+ + M+ + +T
Sbjct: 182 KLREAFGVIETMRKFKFRPAYSAYTTLIGALSAAHEADPMLTLLRQMQEIGYEVTVHLFT 241
Query: 346 TMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVN 405
T++ + ++ A +K + F +++ Y I + KV ++ + + +++
Sbjct: 242 TLICVFAREGRVDAALSLLDEMKSNSFNADLVLYNVCIDCFGKVGKVDMAWKFFHELKSQ 301
Query: 406 GIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEA 465
G+ P+ FT+++ K + D AV ++E++S P A N ++ + + NEA
Sbjct: 302 GLVPDDVTFTSMIGVLCKAERVDEAVELFEELDSNKSVPCVYAYNTMIMGYGSVGKFNEA 361
Query: 466 NELL 469
LL
Sbjct: 362 YSLL 365
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 64/271 (23%), Positives = 116/271 (42%), Gaps = 41/271 (15%)
Query: 101 MLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSH-------------------------- 134
++I + K G NKA ++L M KG P+VV++
Sbjct: 626 IVIDGFCKSGKVNKAYQLLEEMKTKGLQPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSK 685
Query: 135 ---------TALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEA 185
++L++ +G+ GR A I + G P+ T+ +L V+A + EA
Sbjct: 686 AVDLNVVVYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNTYTWNCLLDALVKAEEIDEA 745
Query: 186 EEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSL 245
F + K P P++ + +M+ K + KA + M ++G++ +T+TY ++
Sbjct: 746 LVCFQNM-KNLKCP--PNEVTYSIMVNGLCKVRKFNKAFVFWQEMQKQGLKPNTITYTTM 802
Query: 246 MSFET---NYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGV 302
+S N E ++++ + +G PD Y +I A + +A +FEE G
Sbjct: 803 ISGLARVGNVLEAKDLFERFKSSGGIPDSACYNAMIEGLSNANKAMDAYILFEETRLKGC 862
Query: 303 RPTHKAYNILLDAFAISGMVDQARTVFKCMR 333
R K +LLDA + ++QA V +R
Sbjct: 863 RIYSKTCVVLLDALHKADCLEQAAIVGAVLR 893
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/237 (22%), Positives = 104/237 (43%), Gaps = 1/237 (0%)
Query: 253 KEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNIL 312
+E + + M++ +P +Y LI A A + L + +M + G T + L
Sbjct: 184 REAFGVIETMRKFKFRPAYSAYTTLIGALSAAHEADPMLTLLRQMQEIGYEVTVHLFTTL 243
Query: 313 LDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGF 372
+ FA G VD A ++ M+ + + D+ Y + + ++ A KFF LK G
Sbjct: 244 ICVFAREGRVDAALSLLDEMKSNSFNADLVLYNVCIDCFGKVGKVDMAWKFFHELKSQGL 303
Query: 373 VPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVV 432
VP+ +T+ ++I K +++ +E+++++ N P + T++ YG F+ A
Sbjct: 304 VPDDVTFTSMIGVLCKAERVDEAVELFEELDSNKSVPCVYAYNTMIMGYGSVGKFNEAYS 363
Query: 433 WYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGINGLSISVD 489
+ + G P A N +L+ + EA +L + P + +I +D
Sbjct: 364 LLERQKRKGCIPSVIAYNCILTCLGRKGKVEEALRILEAMKM-DAAPNLTSYNILID 419
>gi|449461475|ref|XP_004148467.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
mitochondrial-like [Cucumis sativus]
Length = 775
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 110/473 (23%), Positives = 217/473 (45%), Gaps = 24/473 (5%)
Query: 5 APRKFMQ-KRRKVEVFKDAADEAGKKNWRRLMNQIEEVGSAVAVLRSERTRGQPLPKDLV 63
A + F+Q K R VE+ D+ + L+ G A+++LR R G P+
Sbjct: 177 AEQHFLQAKARGVEL-----DQEAYSIFVHLLCLKPNSGYALSLLREMRAAGWIPPEGTF 231
Query: 64 LGTLVRLKQLKKWNVVSEVLEWLRIQ-----SWWDFNEMDFLMLITAYGKQGDFNKAEKV 118
T V +K+ NV E LR++ N L+ Y QG+ A +
Sbjct: 232 --TSVITACVKEGNVA----EALRLKDDMVNCGKSMNLAVATSLMKGYCMQGNLRSALVL 285
Query: 119 LSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVE 178
++ +++ G P+ V+++ L++ + G + A + M++ G R S + IL+ +++
Sbjct: 286 VNEISESGLVPNKVTYSVLIDGCCKNGNIEKAFEFYSEMKTKGIRSSVYSLNSILEGYLK 345
Query: 179 ANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQS 238
++ A F D +S L + F+ ++ K G +A L+ + +G+ +
Sbjct: 346 CQSWQNA---FTMFNDALESGL-ANVFTFNTLLSWLCKEGKMNEACNLWDEVIAKGISPN 401
Query: 239 TVTYNSLM---SFETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFE 295
V+YN+++ + N K+Y +M G P+ V++ +L++ Y K E A ++F
Sbjct: 402 VVSYNNIILGHCRKDNINAACKVYKEMLDNGFTPNAVTFTILMDGYFKKGDIENAFSIFH 461
Query: 296 EMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNAS 355
M DA + PT I++ +G + R +F P Y T++ ++
Sbjct: 462 RMKDANILPTDTTLGIIIKGLCKAGRSFEGRDLFNKFVSQGFVPTCMPYNTIIDGFIKEG 521
Query: 356 DMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFT 415
++ A +R + + G P+ +TY +LI G+ K NN++ +++ + M+ G+K + +
Sbjct: 522 NINLASNVYREMCEVGITPSTVTYTSLIDGFCKGNNIDLALKLLNDMKRKGLKMDIKAYG 581
Query: 416 TIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANEL 468
T++D + K +D SA E+ G P++ N +++ K + EA +L
Sbjct: 582 TLIDGFCKRRDMKSAHELLNELRGAGLSPNRFIYNSMITGFKNMNNVEEAIDL 634
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 102/420 (24%), Positives = 186/420 (44%), Gaps = 55/420 (13%)
Query: 79 VSEVLE-WLRIQSWWD----FNE---------MDFLMLITAYGKQGDFNKAEKVLSFMNK 124
++ +LE +L+ QSW + FN+ F L++ K+G N+A + +
Sbjct: 336 LNSILEGYLKCQSWQNAFTMFNDALESGLANVFTFNTLLSWLCKEGKMNEACNLWDEVIA 395
Query: 125 KGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKE 184
KG +P+VVS+ ++ + R A +++ M +G P+A+T+ I++ + + +
Sbjct: 396 KGISPNVVSYNNIILGHCRKDNINAACKVYKEMLDNGFTPNAVTFTILMDGYFKKGDIEN 455
Query: 185 AEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNS 244
A +F + D + + P ++I KAG + R LF +G + + YN+
Sbjct: 456 AFSIFHRMKD---ANILPTDTTLGIIIKGLCKAGRSFEGRDLFNKFVSQGFVPTCMPYNT 512
Query: 245 LMSF---ETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAG 301
++ E N S +Y +M G+ P V+Y LI+ + K + AL + +M G
Sbjct: 513 IIDGFIKEGNINLASNVYREMCEVGITPSTVTYTSLIDGFCKGNNIDLALKLLNDMKRKG 572
Query: 302 VRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAE 361
++ KAY L+D F C RR DM+ A
Sbjct: 573 LKMDIKAYGTLIDGF--------------CKRR---------------------DMKSAH 597
Query: 362 KFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAY 421
+ L+ G PN Y ++I G+ +NN+E+ +++Y KM GI + +T+++D
Sbjct: 598 ELLNELRGAGLSPNRFIYNSMITGFKNMNNVEEAIDLYKKMVNEGIPCDLKTYTSLIDGL 657
Query: 422 GKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGI 481
K+ A + EM S G PD +A +L++ + A ++L + N N P +
Sbjct: 658 LKSGRLLYASDIHTEMLSKGILPDDRAHTVLINGLCNKGQFENARKILEDMNGKNMIPSV 717
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 92/363 (25%), Positives = 168/363 (46%), Gaps = 6/363 (1%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + + +I + ++ + N A KV M G+ P+ V+ T LM+ Y + G +NA +IF
Sbjct: 401 NVVSYNNIILGHCRKDNINAACKVYKEMLDNGFTPNAVTFTILMDGYFKKGDIENAFSIF 460
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
RM+ + P+ T II+K +A + E ++F + + P ++ +I +
Sbjct: 461 HRMKDANILPTDTTLGIIIKGLCKAGRSFEGRDLFNKFVSQ---GFVPTCMPYNTIIDGF 517
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSLM---SFETNYKEVSKIYDQMQRAGLQPDV 271
K G A ++ M E G+ STVTY SL+ N K+ + M+R GL+ D+
Sbjct: 518 IKEGNINLASNVYREMCEVGITPSTVTYTSLIDGFCKGNNIDLALKLLNDMKRKGLKMDI 577
Query: 272 VSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKC 331
+Y LI+ + K R + A + E+ AG+ P YN ++ F V++A ++K
Sbjct: 578 KAYGTLIDGFCKRRDMKSAHELLNELRGAGLSPNRFIYNSMITGFKNMNNVEEAIDLYKK 637
Query: 332 MRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNN 391
M + D+ +YT+++ + + + A + G +P+ + LI G
Sbjct: 638 MVNEGIPCDLKTYTSLIDGLLKSGRLLYASDIHTEMLSKGILPDDRAHTVLINGLCNKGQ 697
Query: 392 LEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNI 451
E +I + M + P+ I+ T++ + K + A + EM G PD +I
Sbjct: 698 FENARKILEDMNGKNMIPSVLIYNTLIAGHFKEGNLQEAFRLHDEMLDRGLVPDNITYDI 757
Query: 452 LLS 454
L++
Sbjct: 758 LVN 760
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 67/288 (23%), Positives = 134/288 (46%), Gaps = 6/288 (2%)
Query: 101 MLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSS 160
++I K G + + + +G+ P+ + + +++ + + G A ++R M
Sbjct: 477 IIIKGLCKAGRSFEGRDLFNKFVSQGFVPTCMPYNTIIDGFIKEGNINLASNVYREMCEV 536
Query: 161 GPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGY 220
G PS +TY ++ F + N A ++ L D ++ LK D K + +I + K
Sbjct: 537 GITPSTVTYTSLIDGFCKGNNIDLALKL---LNDMKRKGLKMDIKAYGTLIDGFCKRRDM 593
Query: 221 EKARKLFALMAERGVQQSTVTYNSLMS-FET--NYKEVSKIYDQMQRAGLQPDVVSYALL 277
+ A +L + G+ + YNS+++ F+ N +E +Y +M G+ D+ +Y L
Sbjct: 594 KSAHELLNELRGAGLSPNRFIYNSMITGFKNMNNVEEAIDLYKKMVNEGIPCDLKTYTSL 653
Query: 278 INAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRC 337
I+ K+ R A + EML G+ P +A+ +L++ G + AR + + M
Sbjct: 654 IDGLLKSGRLLYASDIHTEMLSKGILPDDRAHTVLINGLCNKGQFENARKILEDMNGKNM 713
Query: 338 SPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKG 385
P + Y T+++ + +++ A + + G VP+ ITY L+ G
Sbjct: 714 IPSVLIYNTLIAGHFKEGNLQEAFRLHDEMLDRGLVPDNITYDILVNG 761
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 72/305 (23%), Positives = 129/305 (42%), Gaps = 13/305 (4%)
Query: 165 SALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKAR 224
SAL Y +K +E K +A + + +L H Y++ + + R
Sbjct: 97 SALKYFERIKKKIEFAKCTDAVCILLLILTNSAET--------HRAQYLFDQFASGKSVR 148
Query: 225 KLFALMAERGVQQSTVTYNSLMSF-ETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGK 283
F+ + +R V+ T YN + E N E + + Q + G++ D +Y++ ++
Sbjct: 149 --FSCLMDRLVE-CTKLYNFPLDIQEGNILEAEQHFLQAKARGVELDQEAYSIFVHLLCL 205
Query: 284 ARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICS 343
AL++ EM AG P + ++ A G V +A + M S ++
Sbjct: 206 KPNSGYALSLLREMRAAGWIPPEGTFTSVITACVKEGNVAEALRLKDDMVNCGKSMNLAV 265
Query: 344 YTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMR 403
T+++ Y ++ A + + G VPN +TY LI G K N+EK E Y +M+
Sbjct: 266 ATSLMKGYCMQGNLRSALVLVNEISESGLVPNKVTYSVLIDGCCKNGNIEKAFEFYSEMK 325
Query: 404 VNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERN 463
GI+ + +I++ Y K + + +A + + G + N LLS + N
Sbjct: 326 TKGIRSSVYSLNSILEGYLKCQSWQNAFTMFNDALESGL-ANVFTFNTLLSWLCKEGKMN 384
Query: 464 EANEL 468
EA L
Sbjct: 385 EACNL 389
>gi|302762244|ref|XP_002964544.1| hypothetical protein SELMODRAFT_82221 [Selaginella moellendorffii]
gi|300168273|gb|EFJ34877.1| hypothetical protein SELMODRAFT_82221 [Selaginella moellendorffii]
Length = 528
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 100/422 (23%), Positives = 192/422 (45%), Gaps = 20/422 (4%)
Query: 58 LPKDLVLGTLVRLKQLKKWNVVSEVLEWLRIQSWWDFNEMDFLM---LITAYGKQGDFNK 114
L ++V+G L R +L+ V + D + DFL L+ K
Sbjct: 6 LLHNVVIGGLCRAGRLRHALGV--------YRQMNDAHPPDFLTYTKLVHGLSKARRLRD 57
Query: 115 AEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILK 174
A +VL M + P + T ++++ G R +A + M G +A+TY ++
Sbjct: 58 AVQVLQEMVSARHVPDNTTLTVVVQSLCLGDRVDDARELVEEMLHRGMAANAITYSALVD 117
Query: 175 LFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERG 234
+ + EA + T+ + +P ++ +I + +A ++A M G
Sbjct: 118 GLCKCERLDEAVALVETMAERGCAP---TVVTYNSIITGFCRARRVDEAHGFMEQMVAEG 174
Query: 235 VQQSTVTYNSLMSFETNYKEVSK---IYDQMQRAGLQPDVVSYALLINAYGKARREEEAL 291
+TY +L+ ++V + + ++ R G PD+V+Y+ +I+ KA R +A+
Sbjct: 175 CHPDIITYTALIGGFCKSRDVGRGLELLGEVTRRGFTPDIVTYSTVIDGLCKAGRLRDAV 234
Query: 292 AVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAY 351
+FEEM A PT YN L+ + +G +D+A + M D+C+PD+ +YTT++SA+
Sbjct: 235 DIFEEMSCA---PTAITYNSLIGGYCRAGDMDEAIRLLGKMVDDKCAPDVVTYTTLMSAF 291
Query: 352 VNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQ 411
++ A + F+++ + P+V+T+ +L+ G +E +E+ +++ G P
Sbjct: 292 CKMGRLDDAYELFQQMVANKLSPDVVTFTSLVDGLCGEGRMEDALELLEEITRRGCPPTI 351
Query: 412 TIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGN 471
+ ++D Y K A + S GF P+ NIL++ A ++A + L
Sbjct: 352 YTYNCVVDGYCKANQVRKAEELVADFRSRGFVPNTVTYNILVAGCCRAGRTDQALQYLDQ 411
Query: 472 FN 473
N
Sbjct: 412 LN 413
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 86/379 (22%), Positives = 167/379 (44%), Gaps = 39/379 (10%)
Query: 129 PSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEV 188
P + H ++ R GR ++A ++R+M + P P LTY ++ +A + ++A +V
Sbjct: 3 PGTLLHNVVIGGLCRAGRLRHALGVYRQMNDAHP-PDFLTYTKLVHGLSKARRLRDAVQV 61
Query: 189 FMTLLDEEKSP--------------------------------LKPDQKMFHMMIYMYKK 216
++ P + + + ++ K
Sbjct: 62 LQEMVSARHVPDNTTLTVVVQSLCLGDRVDDARELVEEMLHRGMAANAITYSALVDGLCK 121
Query: 217 AGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSKIY---DQMQRAGLQPDVVS 273
++A L MAERG + VTYNS+++ + V + + +QM G PD+++
Sbjct: 122 CERLDEAVALVETMAERGCAPTVVTYNSIITGFCRARRVDEAHGFMEQMVAEGCHPDIIT 181
Query: 274 YALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMR 333
Y LI + K+R L + E+ G P Y+ ++D +G + A +F+ M
Sbjct: 182 YTALIGGFCKSRDVGRGLELLGEVTRRGFTPDIVTYSTVIDGLCKAGRLRDAVDIFEEM- 240
Query: 334 RDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLE 393
C+P +Y +++ Y A DM+ A + ++ D P+V+TY TL+ + K+ L+
Sbjct: 241 --SCAPTAITYNSLIGGYCRAGDMDEAIRLLGKMVDDKCAPDVVTYTTLMSAFCKMGRLD 298
Query: 394 KMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILL 453
E++ +M N + P+ FT+++D + A+ +E+ G PP N ++
Sbjct: 299 DAYELFQQMVANKLSPDVVTFTSLVDGLCGEGRMEDALELLEEITRRGCPPTIYTYNCVV 358
Query: 454 SLAKTADERNEANELLGNF 472
A++ +A EL+ +F
Sbjct: 359 DGYCKANQVRKAEELVADF 377
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 94/404 (23%), Positives = 168/404 (41%), Gaps = 42/404 (10%)
Query: 115 AEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILK 174
A +++ M +G A + ++++AL++ + R A A+ M G P+ +TY I+
Sbjct: 93 ARELVEEMLHRGMAANAITYSALVDGLCKCERLDEAVALVETMAERGCAPTVVTYNSIIT 152
Query: 175 LFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERG 234
F A + EA FM + E PD + +I + K+ + +L + RG
Sbjct: 153 GFCRARRVDEAHG-FMEQMVAEGC--HPDIITYTALIGGFCKSRDVGRGLELLGEVTRRG 209
Query: 235 VQQSTVTYNSLMSFETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVF 294
VTY++++ + D + P ++Y LI Y +A +EA+ +
Sbjct: 210 FTPDIVTYSTVIDGLCKAGRLRDAVDIFEEMSCAPTAITYNSLIGGYCRAGDMDEAIRLL 269
Query: 295 EEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNA 354
+M+D P Y L+ AF G +D A +F+ M ++ SPD+ ++T+++
Sbjct: 270 GKMVDDKCAPDVVTYTTLMSAFCKMGRLDDAYELFQQMVANKLSPDVVTFTSLVDGLCGE 329
Query: 355 SDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQT-- 412
ME A + + + G P + TY ++ GY K N + K E+ R G PN
Sbjct: 330 GRMEDALELLEEITRRGCPPTIYTYNCVVDGYCKANQVRKAEELVADFRSRGFVPNTVTY 389
Query: 413 -----------------------------------IFTTIMDAYGKNKDFDSAVVWYKEM 437
++ I+DA ++ D AV +Y+EM
Sbjct: 390 NILVAGCCRAGRTDQALQYLDQLNSEGGPCPTSVAMYAIILDALCRDGRTDDAVQFYEEM 449
Query: 438 ESCGFPPDQKA-KNILLSLAKTADERNEANELLGNFNHPNNEPG 480
G+ P ++ +L K A + +A+ELL + PG
Sbjct: 450 IQRGYVPAAATFATVVFALCK-AHQPQQAHELLEEMIKYGHTPG 492
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 105/483 (21%), Positives = 196/483 (40%), Gaps = 56/483 (11%)
Query: 27 GKKNWRRLMNQIEEVGSAVAVLRSERTRGQPLPKDLVLGTLVRLKQLK-KWNVVSEVLEW 85
G RRL + AV VL+ E + +P + L +V+ L + + E++E
Sbjct: 48 GLSKARRLRD-------AVQVLQ-EMVSARHVPDNTTLTVVVQSLCLGDRVDDARELVEE 99
Query: 86 LRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGG 145
+ + N + + L+ K ++A ++ M ++G AP+VV++ +++ + R
Sbjct: 100 M-LHRGMAANAITYSALVDGLCKCERLDEAVALVETMAERGCAPTVVTYNSIITGFCRAR 158
Query: 146 RYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQK 205
R A +M + G P +TY ++ F ++ E+ L + + PD
Sbjct: 159 RVDEAHGFMEQMVAEGCHPDIITYTALIGGFCKSRDVGRGLEL---LGEVTRRGFTPDIV 215
Query: 206 MFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLM---SFETNYKEVSKIYDQM 262
+ +I KAG A +F E + +TYNSL+ + E ++ +M
Sbjct: 216 TYSTVIDGLCKAGRLRDAVDIFE---EMSCAPTAITYNSLIGGYCRAGDMDEAIRLLGKM 272
Query: 263 QRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMV 322
PDVV+Y L++A+ K R ++A +F++M+ + P + L+D G +
Sbjct: 273 VDDKCAPDVVTYTTLMSAFCKMGRLDDAYELFQQMVANKLSPDVVTFTSLVDGLCGEGRM 332
Query: 323 DQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTL 382
+ A + + + R C P I +Y ++ Y A+ + AE+ + GFVPN +TY L
Sbjct: 333 EDALELLEEITRRGCPPTIYTYNCVVDGYCKANQVRKAEELVADFRSRGFVPNTVTYNIL 392
Query: 383 IKGYAKVNNLEKMME-------------------------------------IYDKMRVN 405
+ G + ++ ++ Y++M
Sbjct: 393 VAGCCRAGRTDQALQYLDQLNSEGGPCPTSVAMYAIILDALCRDGRTDDAVQFYEEMIQR 452
Query: 406 GIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEA 465
G P F T++ A K A +EM G P + ++S A +A
Sbjct: 453 GYVPAAATFATVVFALCKAHQPQQAHELLEEMIKYGHTPGPGTCDAVVSAYCRAGMIQKA 512
Query: 466 NEL 468
+EL
Sbjct: 513 DEL 515
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 69/273 (25%), Positives = 130/273 (47%), Gaps = 10/273 (3%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
LI Y + GD ++A ++L M AP VV++T LM A+ + GR +A +F++M ++
Sbjct: 252 LIGGYCRAGDMDEAIRLLGKMVDDKCAPDVVTYTTLMSAFCKMGRLDDAYELFQQMVANK 311
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDE-EKSPLKPDQKMFHMMIYMYKKAGGY 220
P +T+ ++ + ++A E LL+E + P ++ ++ Y KA
Sbjct: 312 LSPDVVTFTSLVDGLCGEGRMEDALE----LLEEITRRGCPPTIYTYNCVVDGYCKANQV 367
Query: 221 EKARKLFALMAERGVQQSTVTYNSLMSFETN---YKEVSKIYDQMQRAG--LQPDVVSYA 275
KA +L A RG +TVTYN L++ + + DQ+ G V YA
Sbjct: 368 RKAEELVADFRSRGFVPNTVTYNILVAGCCRAGRTDQALQYLDQLNSEGGPCPTSVAMYA 427
Query: 276 LLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRD 335
++++A + R ++A+ +EEM+ G P + ++ A + QA + + M +
Sbjct: 428 IILDALCRDGRTDDAVQFYEEMIQRGYVPAAATFATVVFALCKAHQPQQAHELLEEMIKY 487
Query: 336 RCSPDICSYTTMLSAYVNASDMEGAEKFFRRLK 368
+P + ++SAY A ++ A++ L+
Sbjct: 488 GHTPGPGTCDAVVSAYCRAGMIQKADELASELR 520
>gi|15237575|ref|NP_198933.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75309191|sp|Q9FLL3.1|PP412_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g41170, mitochondrial; Flags: Precursor
gi|9759163|dbj|BAB09719.1| salt-inducible protein-like [Arabidopsis thaliana]
gi|66792708|gb|AAY56456.1| At5g41170 [Arabidopsis thaliana]
gi|332007267|gb|AED94650.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 527
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 90/364 (24%), Positives = 171/364 (46%), Gaps = 11/364 (3%)
Query: 97 MDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRR 156
+DF L+ K F+ + + G + + + LM + + + A + +
Sbjct: 73 IDFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCNLLMNCFCQSSQPYLASSFLGK 132
Query: 157 MQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEE-KSPLKPDQKMFHMMIYMYK 215
M G P +T+ ++ F N+ +EA M+++++ + +KPD M+ +I
Sbjct: 133 MMKLGFEPDIVTFTSLINGFCLGNRMEEA----MSMVNQMVEMGIKPDVVMYTTIIDSLC 188
Query: 216 KAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETN---YKEVSKIYDQMQRAGLQPDVV 272
K G A LF M G++ V Y SL++ N +++ + M + ++PDV+
Sbjct: 189 KNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVI 248
Query: 273 SYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCM 332
++ LI+A+ K + +A ++ EM+ + P Y L++ F + G VD+AR +F M
Sbjct: 249 TFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLM 308
Query: 333 RRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNL 392
C PD+ +YT++++ + ++ A K F + Q G N ITY TLI+G+ +V
Sbjct: 309 ETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKP 368
Query: 393 EKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEM---ESCGFPPDQKAK 449
E++ M G+ PN + ++ N A++ +++M E G P+
Sbjct: 369 NVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTY 428
Query: 450 NILL 453
N+LL
Sbjct: 429 NVLL 432
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 89/343 (25%), Positives = 170/343 (49%), Gaps = 9/343 (2%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
+I + K G N A + M G P VV +T+L+ GR+++A+++ R M
Sbjct: 183 IIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRK 242
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
+P +T+ ++ FV+ KF +AEE++ ++ + + P+ + +I + G +
Sbjct: 243 IKPDVITFNALIDAFVKEGKFLDAEELYNEMI---RMSIAPNIFTYTSLINGFCMEGCVD 299
Query: 222 KARKLFALMAERGVQQSTVTYNSLMSFETNYKEVS---KIYDQMQRAGLQPDVVSYALLI 278
+AR++F LM +G V Y SL++ K+V KI+ +M + GL + ++Y LI
Sbjct: 300 EARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLI 359
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRR---D 335
+G+ + A VF M+ GV P + YN+LL +G V +A +F+ M++ D
Sbjct: 360 QGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMD 419
Query: 336 RCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKM 395
+P+I +Y +L +E A F +++ +ITY +I+G K ++
Sbjct: 420 GVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNA 479
Query: 396 MEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEME 438
+ ++ + G+KPN +TT++ + A V +++M+
Sbjct: 480 VNLFCSLPSKGVKPNVVTYTTMISGLFREGLKHEAHVLFRKMK 522
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 81/345 (23%), Positives = 162/345 (46%), Gaps = 6/345 (1%)
Query: 112 FNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQI 171
FN+A + + M + PS++ T L+ + ++ + +Q G T +
Sbjct: 53 FNEALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCNL 112
Query: 172 ILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMA 231
++ F ++++ A ++ K +PD F +I + E+A + M
Sbjct: 113 LMNCFCQSSQPYLASSFLGKMM---KLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMV 169
Query: 232 ERGVQQSTVTYNSLMSFETNYKEVS---KIYDQMQRAGLQPDVVSYALLINAYGKARREE 288
E G++ V Y +++ V+ ++DQM+ G++PDVV Y L+N + R
Sbjct: 170 EMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWR 229
Query: 289 EALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTML 348
+A ++ M ++P +N L+DAF G A ++ M R +P+I +YT+++
Sbjct: 230 DADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLI 289
Query: 349 SAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIK 408
+ + ++ A + F ++ G P+V+ Y +LI G+ K ++ M+I+ +M G+
Sbjct: 290 NGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLT 349
Query: 409 PNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILL 453
N +TT++ +G+ + A + M S G PP+ + N+LL
Sbjct: 350 GNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLL 394
Score = 112 bits (279), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 75/340 (22%), Positives = 152/340 (44%), Gaps = 8/340 (2%)
Query: 146 RYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDE-EKSPLKPDQ 204
++ A +F M S P PS + + +L + + KF +V + L D + + D
Sbjct: 52 QFNEALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKF----DVVINLCDHLQIMGVSHDL 107
Query: 205 KMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLM---SFETNYKEVSKIYDQ 261
++++ + ++ A M + G + VT+ SL+ +E + +Q
Sbjct: 108 YTCNLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQ 167
Query: 262 MQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGM 321
M G++PDVV Y +I++ K AL++F++M + G+RP Y L++ SG
Sbjct: 168 MVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGR 227
Query: 322 VDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGT 381
A ++ + M + + PD+ ++ ++ A+V AE+ + + + PN+ TY +
Sbjct: 228 WRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTS 287
Query: 382 LIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCG 441
LI G+ +++ +++ M G P+ +T++++ + K K D A+ + EM G
Sbjct: 288 LINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKG 347
Query: 442 FPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGI 481
+ L+ + N A E+ + P I
Sbjct: 348 LTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNI 387
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 71/289 (24%), Positives = 136/289 (47%), Gaps = 6/289 (2%)
Query: 169 YQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFA 228
Y+ IL+ + + +F EA ++F +++ P D F ++ + K ++ L
Sbjct: 40 YREILRNGLHSLQFNEALDLFTHMVESRPLPSIID---FTKLLNVIAKMKKFDVVINLCD 96
Query: 229 LMAERGVQQSTVTYNSLMSFETNYKE---VSKIYDQMQRAGLQPDVVSYALLINAYGKAR 285
+ GV T N LM+ + S +M + G +PD+V++ LIN +
Sbjct: 97 HLQIMGVSHDLYTCNLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGN 156
Query: 286 REEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYT 345
R EEA+++ +M++ G++P Y ++D+ +G V+ A ++F M PD+ YT
Sbjct: 157 RMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYT 216
Query: 346 TMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVN 405
++++ N+ A+ R + + P+VIT+ LI + K E+Y++M
Sbjct: 217 SLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRM 276
Query: 406 GIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLS 454
I PN +T++++ + D A + ME+ G PD A L++
Sbjct: 277 SIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLIN 325
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/283 (23%), Positives = 120/283 (42%), Gaps = 44/283 (15%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + LI + +G ++A ++ M KG P VV++T+L+ + + + +A IF
Sbjct: 281 NIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIF 340
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
M G + +TY +++ F + K A+EV
Sbjct: 341 YEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEV-------------------------- 374
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSL---MSFETNYKEVSKIYDQMQRA---GLQ 268
F+ M RGV + TYN L + + K+ I++ MQ+ G+
Sbjct: 375 ------------FSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVA 422
Query: 269 PDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTV 328
P++ +Y +L++ + E+AL VFE+M + Y I++ +G V A +
Sbjct: 423 PNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNAVNL 482
Query: 329 FKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDG 371
F + P++ +YTTM+S A FR++K+DG
Sbjct: 483 FCSLPSKGVKPNVVTYTTMISGLFREGLKHEAHVLFRKMKEDG 525
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/201 (23%), Positives = 98/201 (48%)
Query: 289 EALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTML 348
EAL +F M+++ P+ + LL+ A D + ++ S D+ + ++
Sbjct: 55 EALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCNLLM 114
Query: 349 SAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIK 408
+ + +S A F ++ + GF P+++T+ +LI G+ N +E+ M + ++M GIK
Sbjct: 115 NCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIK 174
Query: 409 PNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANEL 468
P+ ++TTI+D+ KN + A+ + +ME+ G PD L++ + +A+ L
Sbjct: 175 PDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSL 234
Query: 469 LGNFNHPNNEPGINGLSISVD 489
L +P + + +D
Sbjct: 235 LRGMTKRKIKPDVITFNALID 255
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 99/204 (48%), Gaps = 3/204 (1%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
LI + K + A K+ M++KG + +++T L++ +G+ G+ A+ +F M S G
Sbjct: 323 LINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRG 382
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
P+ TY ++L K K+A +F + E + P+ ++++++ G E
Sbjct: 383 VPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLE 442
Query: 222 KARKLFALMAERGVQQSTVTYNSL---MSFETNYKEVSKIYDQMQRAGLQPDVVSYALLI 278
KA +F M +R + +TY + M K ++ + G++P+VV+Y +I
Sbjct: 443 KALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNAVNLFCSLPSKGVKPNVVTYTTMI 502
Query: 279 NAYGKARREEEALAVFEEMLDAGV 302
+ + + EA +F +M + GV
Sbjct: 503 SGLFREGLKHEAHVLFRKMKEDGV 526
>gi|5738362|emb|CAB52870.1| putative protein [Arabidopsis thaliana]
gi|7268785|emb|CAB78991.1| putative protein [Arabidopsis thaliana]
Length = 1302
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 93/342 (27%), Positives = 172/342 (50%), Gaps = 7/342 (2%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N ++F LI K+G +A ++L M + G+ P+V +HTAL++ + G + A +F
Sbjct: 887 NLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEKAFRLF 946
Query: 155 RRM-QSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYM 213
++ +S +P+ TY ++ + + +K AE +F + ++ L P+ + +I
Sbjct: 947 LKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRM---KEQGLFPNVNTYTTLING 1003
Query: 214 YKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSKIYDQMQRA---GLQPD 270
+ KAG + +A +L LM + G + TYN+ + + Y+ + +A GL+ D
Sbjct: 1004 HCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLNKAFSCGLEAD 1063
Query: 271 VVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFK 330
V+Y +LI K +ALA F M G + NIL+ AF + ++ +F+
Sbjct: 1064 GVTYTILIQEQCKQNDINQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKESERLFQ 1123
Query: 331 CMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVN 390
+ P +YT+M+S Y D++ A K+F +K+ G VP+ TYG+LI G K +
Sbjct: 1124 LVVSLGLIPTKETYTSMISCYCKEGDIDLALKYFHNMKRHGCVPDSFTYGSLISGLCKKS 1183
Query: 391 NLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVV 432
+++ ++Y+ M G+ P + T+ Y K D +A++
Sbjct: 1184 MVDEACKLYEAMIDRGLSPPEVTRVTLAYEYCKRNDSANAMI 1225
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 88/346 (25%), Positives = 155/346 (44%), Gaps = 12/346 (3%)
Query: 136 ALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDE 195
++ + GR A + MQ+ G PS++T +L++ VE + AE VF DE
Sbjct: 753 CMLRNFSEIGRLNEAVGMVMDMQNQGLTPSSITMNCVLEIAVELGLIEYAENVF----DE 808
Query: 196 -EKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKE 254
+ PD + +M+ + G ++A + M +RG T +++
Sbjct: 809 MSVRGVVPDSSSYKLMVIGCFRDGKIQEADRWLTGMIQRGFIPDNATCTLILTALCENGL 868
Query: 255 VSKI---YDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNI 311
V++ + +M G +P+++++ LI+ K ++A + EEM+ G +P +
Sbjct: 869 VNRAIWYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTA 928
Query: 312 LLDAFAISGMVDQA-RTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQD 370
L+D G ++A R K +R D P++ +YT+M+ Y + AE F R+K+
Sbjct: 929 LIDGLCKRGWTEKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQ 988
Query: 371 GFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSA 430
G PNV TY TLI G+ K + + E+ + M G PN + +D+ K A
Sbjct: 989 GLFPNVNTYTTLINGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEA 1048
Query: 431 VVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPN 476
+ SCG D IL+ + ++N+ N+ L F N
Sbjct: 1049 YELLNKAFSCGLEADGVTYTILI---QEQCKQNDINQALAFFCRMN 1091
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 73/357 (20%), Positives = 165/357 (46%), Gaps = 7/357 (1%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
++ + + G N+A ++ M +G PS ++ ++E G + AE +F M G
Sbjct: 754 MLRNFSEIGRLNEAVGMVMDMQNQGLTPSSITMNCVLEIAVELGLIEYAENVFDEMSVRG 813
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
P + +Y++++ K +EA+ ++ + PD +++ + G
Sbjct: 814 VVPDSSSYKLMVIGCFRDGKIQEADRWLTGMI---QRGFIPDNATCTLILTALCENGLVN 870
Query: 222 KARKLFALMAERGVQQSTVTYNSL---MSFETNYKEVSKIYDQMQRAGLQPDVVSYALLI 278
+A F M + G + + + + SL + + + K+ ++ ++M R G +P+V ++ LI
Sbjct: 871 RAIWYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALI 930
Query: 279 NAYGKARREEEALAVFEEMLDAGV-RPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRC 337
+ K E+A +F +++ + +P Y ++ + +++A +F M+
Sbjct: 931 DGLCKRGWTEKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGL 990
Query: 338 SPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMME 397
P++ +YTT+++ + A A + + +GF+PN+ TY I K + + E
Sbjct: 991 FPNVNTYTTLINGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYE 1050
Query: 398 IYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLS 454
+ +K G++ + +T ++ K D + A+ ++ M GF D + NIL++
Sbjct: 1051 LLNKAFSCGLEADGVTYTILIQEQCKQNDINQALAFFCRMNKTGFEADMRLNNILIA 1107
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 82/359 (22%), Positives = 156/359 (43%), Gaps = 8/359 (2%)
Query: 100 LMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQS 159
LM+I + + G +A++ L+ M ++G+ P + T ++ A G A FR+M
Sbjct: 823 LMVIGCF-RDGKIQEADRWLTGMIQRGFIPDNATCTLILTALCENGLVNRAIWYFRKMID 881
Query: 160 SGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGG 219
G +P+ + + ++ + K+A E+ ++ ++ KP+ +I K G
Sbjct: 882 LGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMV---RNGWKPNVYTHTALIDGLCKRGW 938
Query: 220 YEKARKLFALMAERGVQQSTV-TYNSLM---SFETNYKEVSKIYDQMQRAGLQPDVVSYA 275
EKA +LF + + V TY S++ E ++ +M+ GL P+V +Y
Sbjct: 939 TEKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYT 998
Query: 276 LLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRD 335
LIN + KA A + M D G P YN +D+ +A +
Sbjct: 999 TLINGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLNKAFSC 1058
Query: 336 RCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKM 395
D +YT ++ +D+ A FF R+ + GF ++ LI + + +++
Sbjct: 1059 GLEADGVTYTILIQEQCKQNDINQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKES 1118
Query: 396 MEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLS 454
++ + G+ P + +T+++ Y K D D A+ ++ M+ G PD L+S
Sbjct: 1119 ERLFQLVVSLGLIPTKETYTSMISCYCKEGDIDLALKYFHNMKRHGCVPDSFTYGSLIS 1177
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/315 (20%), Positives = 137/315 (43%), Gaps = 6/315 (1%)
Query: 181 KFKEAEEVFMTLLDE--EKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQS 238
KF+ +++ D L+ ++ M+ + + G +A + M +G+ S
Sbjct: 723 KFRHFMRLYLVTADSLLANGNLQKAHEVMRCMLRNFSEIGRLNEAVGMVMDMQNQGLTPS 782
Query: 239 TVTYNSLMSFETNYKEVS---KIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFE 295
++T N ++ + ++D+M G+ PD SY L++ + + +EA
Sbjct: 783 SITMNCVLEIAVELGLIEYAENVFDEMSVRGVVPDSSSYKLMVIGCFRDGKIQEADRWLT 842
Query: 296 EMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNAS 355
M+ G P + ++L A +G+V++A F+ M P++ ++T+++
Sbjct: 843 GMIQRGFIPDNATCTLILTALCENGLVNRAIWYFRKMIDLGFKPNLINFTSLIDGLCKKG 902
Query: 356 DMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKM-RVNGIKPNQTIF 414
++ A + + ++G+ PNV T+ LI G K EK ++ K+ R + KPN +
Sbjct: 903 SIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEKAFRLFLKLVRSDTYKPNVHTY 962
Query: 415 TTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNH 474
T+++ Y K + A + + M+ G P+ L++ A A EL+
Sbjct: 963 TSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGSFGRAYELMNLMGD 1022
Query: 475 PNNEPGINGLSISVD 489
P I + ++D
Sbjct: 1023 EGFMPNIYTYNAAID 1037
>gi|15240249|ref|NP_200948.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171473|sp|Q9FLJ4.1|PP440_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g61400
gi|9757861|dbj|BAB08495.1| unnamed protein product [Arabidopsis thaliana]
gi|332010079|gb|AED97462.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 654
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 91/341 (26%), Positives = 162/341 (47%), Gaps = 6/341 (1%)
Query: 99 FLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQ 158
+ +L KQG ++K EK+L M G P+V +T + R + + AE +F M+
Sbjct: 202 YFVLFQCCFKQGLYSKKEKLLDEMTSLGIKPNVYIYTIYILDLCRDNKMEEAEKMFELMK 261
Query: 159 SSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAG 218
G P+ TY ++ + + ++A ++ +L E L P+ +F ++ + KA
Sbjct: 262 KHGVLPNLYTYSAMIDGYCKTGNVRQAYGLYKEILVAE---LLPNVVVFGTLVDGFCKAR 318
Query: 219 GYEKARKLFALMAERGVQQSTVTYNSLMSFET---NYKEVSKIYDQMQRAGLQPDVVSYA 275
AR LF M + GV + YN L+ N E + +M+ L PDV +Y
Sbjct: 319 ELVTARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLNLSPDVFTYT 378
Query: 276 LLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRD 335
+LIN + EA +F++M + + P+ YN L+ + ++QA + M
Sbjct: 379 ILINGLCIEDQVAEANRLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQALDLCSEMTAS 438
Query: 336 RCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKM 395
P+I +++T++ Y N D++ A + + G VP+V+TY LI + K N+++
Sbjct: 439 GVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTALIDAHFKEANMKEA 498
Query: 396 MEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKE 436
+ +Y M GI PN F ++D + K A+ +Y+E
Sbjct: 499 LRLYSDMLEAGIHPNDHTFACLVDGFWKEGRLSVAIDFYQE 539
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 92/351 (26%), Positives = 172/351 (49%), Gaps = 11/351 (3%)
Query: 99 FLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQ 158
F +LI + + G F E+ L + +P + +++ R R+ + ++ M
Sbjct: 135 FSLLIMEFLEMGLF---EEALWVSREMKCSPDSKACLSILNGLVRRRRFDSVWVDYQLMI 191
Query: 159 SSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKS-PLKPDQKMFHMMIYMYKKA 217
S G P Y ++ + + + + E+ LLDE S +KP+ ++ + I +
Sbjct: 192 SRGLVPDVHIYFVLFQCCFKQGLYSKKEK----LLDEMTSLGIKPNVYIYTIYILDLCRD 247
Query: 218 GGYEKARKLFALMAERGVQQSTVTYNSLM---SFETNYKEVSKIYDQMQRAGLQPDVVSY 274
E+A K+F LM + GV + TY++++ N ++ +Y ++ A L P+VV +
Sbjct: 248 NKMEEAEKMFELMKKHGVLPNLYTYSAMIDGYCKTGNVRQAYGLYKEILVAELLPNVVVF 307
Query: 275 ALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRR 334
L++ + KAR A ++F M+ GV P YN L+ SG + +A + M
Sbjct: 308 GTLVDGFCKARELVTARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMES 367
Query: 335 DRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEK 394
SPD+ +YT +++ + A + F+++K + P+ TY +LI GY K N+E+
Sbjct: 368 LNLSPDVFTYTILINGLCIEDQVAEANRLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQ 427
Query: 395 MMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPD 445
+++ +M +G++PN F+T++D Y +D +A+ Y EM G PD
Sbjct: 428 ALDLCSEMTASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPD 478
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 80/340 (23%), Positives = 155/340 (45%), Gaps = 6/340 (1%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + F L+ + K + A + M K G P++ + L+ + + G A +
Sbjct: 303 NVVVFGTLVDGFCKARELVTARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLL 362
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
M+S P TY I++ ++ EA +F + +E + P ++ +I+ Y
Sbjct: 363 SEMESLNLSPDVFTYTILINGLCIEDQVAEANRLFQKMKNER---IFPSSATYNSLIHGY 419
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSK---IYDQMQRAGLQPDV 271
K E+A L + M GV+ + +T+++L+ N +++ +Y +M G+ PDV
Sbjct: 420 CKEYNMEQALDLCSEMTASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPDV 479
Query: 272 VSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKC 331
V+Y LI+A+ K +EAL ++ +ML+AG+ P + L+D F G + A ++
Sbjct: 480 VTYTALIDAHFKEANMKEALRLYSDMLEAGIHPNDHTFACLVDGFWKEGRLSVAIDFYQE 539
Query: 332 MRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNN 391
+ R + +T ++ + A +FF ++ G P++ +Y +++KG+ +
Sbjct: 540 NNQQRSCWNHVGFTCLIEGLCQNGYILRASRFFSDMRSCGITPDICSYVSMLKGHLQEKR 599
Query: 392 LEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAV 431
+ M + M GI PN + + Y N SA
Sbjct: 600 ITDTMMLQCDMIKTGILPNLLVNQLLARFYQANGYVKSAC 639
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 79/337 (23%), Positives = 135/337 (40%), Gaps = 31/337 (9%)
Query: 181 KFKEAEEVFMTLLDEEKSPLKP--DQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQS 238
K + AEE F +S + D + F +I++ A Y AR L + ER + S
Sbjct: 50 KCRSAEEAFKLFETSSRSRVSKSNDLQSFSAVIHVLTGAHKYTLARCLIKSLIERLKRHS 109
Query: 239 TVT------YNSLMSFETNYKEV---SKIYDQMQRAGL-------------QPDVVSYAL 276
+ +N+L ++ + S + + GL PD +
Sbjct: 110 EPSNMSHRLFNALEDIQSPKFSIGVFSLLIMEFLEMGLFEEALWVSREMKCSPDSKACLS 169
Query: 277 LINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDR 336
++N + RR + ++ M+ G+ P Y +L G+ + + M
Sbjct: 170 ILNGLVRRRRFDSVWVDYQLMISRGLVPDVHIYFVLFQCCFKQGLYSKKEKLLDEMTSLG 229
Query: 337 CSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMM 396
P++ YT + + ME AEK F +K+ G +PN+ TY +I GY K N+ +
Sbjct: 230 IKPNVYIYTIYILDLCRDNKMEEAEKMFELMKKHGVLPNLYTYSAMIDGYCKTGNVRQAY 289
Query: 397 EIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLA 456
+Y ++ V + PN +F T++D + K ++ +A + M G P+ N L+
Sbjct: 290 GLYKEILVAELLPNVVVFGTLVDGFCKARELVTARSLFVHMVKFGVDPNLYVYNCLIHGH 349
Query: 457 KTADERNEANELLGNFNHPNNEPG-------INGLSI 486
+ EA LL N P INGL I
Sbjct: 350 CKSGNMLEAVGLLSEMESLNLSPDVFTYTILINGLCI 386
>gi|115473997|ref|NP_001060597.1| Os07g0671200 [Oryza sativa Japonica Group]
gi|22831126|dbj|BAC15987.1| putative crp1(chloroplast RNA processing 1) protein [Oryza sativa
Japonica Group]
gi|113612133|dbj|BAF22511.1| Os07g0671200 [Oryza sativa Japonica Group]
Length = 551
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 91/373 (24%), Positives = 174/373 (46%), Gaps = 8/373 (2%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + + L+ AY ++ D ++ ++L M +G P+V ++T L++ EA+F
Sbjct: 177 NALCYNSLLDAYTREKDDDRVAEMLKVMENEGIEPTVGTYTILVDGLSAARDITKVEAVF 236
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDE-EKSPLKPDQKMFHMMIYM 213
M+S Y ++ + A + A EVF DE + ++P++ + +I
Sbjct: 237 EEMKSKNLSGDVYFYSSVINAYCRAGNVRRASEVF----DECVGNGIEPNEHTYGALING 292
Query: 214 YKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSKIYDQ---MQRAGLQPD 270
+ K G E A L M RGV + + +N+++ V K + M++ G++ D
Sbjct: 293 FCKIGQMEAAEMLVTDMQVRGVGINQIVFNTMIDGYCRKNMVDKALEIKMIMEKMGIELD 352
Query: 271 VVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFK 330
V +Y L +A R +EA + M++ GVRP H +Y L+ G + +AR +F+
Sbjct: 353 VYTYNTLACGLRRANRMDEAKNLLRIMIEKGVRPNHVSYTTLISIHCNEGDMVEARRLFR 412
Query: 331 CMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVN 390
M + P + +Y M+ Y+ + AE+F +++ G VP++ +Y L+ G+
Sbjct: 413 EMAGNGAEPSLVTYNVMMDGYIKKGSIREAERFKNEMEKKGLVPDIYSYAALVHGHCVNG 472
Query: 391 NLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKN 450
++ + ++++M+ G KPN +T ++ K + A Y M G PD +
Sbjct: 473 KVDVALRLFEEMKQRGSKPNLVAYTALISGLAKEGRSEEAFQLYDNMLGDGLTPDDALYS 532
Query: 451 ILLSLAKTADERN 463
L+ T ++N
Sbjct: 533 ALVGSLHTDKKQN 545
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 87/376 (23%), Positives = 170/376 (45%), Gaps = 8/376 (2%)
Query: 101 MLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSS 160
+++ Y K G A ++L M + G + + + +L++AY R + + M++
Sbjct: 148 VVVDGYCKSGRVAHARQLLDEMPRHGVKVNALCYNSLLDAYTREKDDDRVAEMLKVMENE 207
Query: 161 GPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSP-LKPDQKMFHMMIYMYKKAGG 219
G P+ TY I++ A + E VF +E KS L D + +I Y +AG
Sbjct: 208 GIEPTVGTYTILVDGLSAARDITKVEAVF----EEMKSKNLSGDVYFYSSVINAYCRAGN 263
Query: 220 YEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSK---IYDQMQRAGLQPDVVSYAL 276
+A ++F G++ + TY +L++ ++ + MQ G+ + + +
Sbjct: 264 VRRASEVFDECVGNGIEPNEHTYGALINGFCKIGQMEAAEMLVTDMQVRGVGINQIVFNT 323
Query: 277 LINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDR 336
+I+ Y + ++AL + M G+ YN L + +D+A+ + + M
Sbjct: 324 MIDGYCRKNMVDKALEIKMIMEKMGIELDVYTYNTLACGLRRANRMDEAKNLLRIMIEKG 383
Query: 337 CSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMM 396
P+ SYTT++S + N DM A + FR + +G P+++TY ++ GY K ++ +
Sbjct: 384 VRPNHVSYTTLISIHCNEGDMVEARRLFREMAGNGAEPSLVTYNVMMDGYIKKGSIREAE 443
Query: 397 EIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLA 456
++M G+ P+ + ++ + N D A+ ++EM+ G P+ A L+S
Sbjct: 444 RFKNEMEKKGLVPDIYSYAALVHGHCVNGKVDVALRLFEEMKQRGSKPNLVAYTALISGL 503
Query: 457 KTADERNEANELLGNF 472
EA +L N
Sbjct: 504 AKEGRSEEAFQLYDNM 519
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 71/279 (25%), Positives = 127/279 (45%), Gaps = 3/279 (1%)
Query: 214 YKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKE---VSKIYDQMQRAGLQPD 270
Y K+G AR+L M GV+ + + YNSL+ T K+ V+++ M+ G++P
Sbjct: 153 YCKSGRVAHARQLLDEMPRHGVKVNALCYNSLLDAYTREKDDDRVAEMLKVMENEGIEPT 212
Query: 271 VVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFK 330
V +Y +L++ AR + AVFEEM + Y+ +++A+ +G V +A VF
Sbjct: 213 VGTYTILVDGLSAARDITKVEAVFEEMKSKNLSGDVYFYSSVINAYCRAGNVRRASEVFD 272
Query: 331 CMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVN 390
+ P+ +Y +++ + ME AE ++ G N I + T+I GY + N
Sbjct: 273 ECVGNGIEPNEHTYGALINGFCKIGQMEAAEMLVTDMQVRGVGINQIVFNTMIDGYCRKN 332
Query: 391 NLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKN 450
++K +EI M GI+ + + T+ + D A + M G P+ +
Sbjct: 333 MVDKALEIKMIMEKMGIELDVYTYNTLACGLRRANRMDEAKNLLRIMIEKGVRPNHVSYT 392
Query: 451 ILLSLAKTADERNEANELLGNFNHPNNEPGINGLSISVD 489
L+S+ + EA L EP + ++ +D
Sbjct: 393 TLISIHCNEGDMVEARRLFREMAGNGAEPSLVTYNVMMD 431
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 71/272 (26%), Positives = 114/272 (41%), Gaps = 42/272 (15%)
Query: 263 QRAGLQPDVV---SYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFA-- 317
Q A PD V S +++++ Y K+ R A + +EM GV+ YN LLDA+
Sbjct: 132 QAATSCPDSVTPLSASVVVDGYCKSGRVAHARQLLDEMPRHGVKVNALCYNSLLDAYTRE 191
Query: 318 ----------------------------ISGM-----VDQARTVFKCMRRDRCSPDICSY 344
+ G+ + + VF+ M+ S D+ Y
Sbjct: 192 KDDDRVAEMLKVMENEGIEPTVGTYTILVDGLSAARDITKVEAVFEEMKSKNLSGDVYFY 251
Query: 345 TTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRV 404
+++++AY A ++ A + F +G PN TYG LI G+ K+ +E + M+V
Sbjct: 252 SSVINAYCRAGNVRRASEVFDECVGNGIEPNEHTYGALINGFCKIGQMEAAEMLVTDMQV 311
Query: 405 NGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNE 464
G+ NQ +F T++D Y + D A+ ME G D N L + A+ +E
Sbjct: 312 RGVGINQIVFNTMIDGYCRKNMVDKALEIKMIMEKMGIELDVYTYNTLACGLRRANRMDE 371
Query: 465 ANELLGNF----NHPNNEPGINGLSISVDEED 492
A LL PN+ +SI +E D
Sbjct: 372 AKNLLRIMIEKGVRPNHVSYTTLISIHCNEGD 403
>gi|222636130|gb|EEE66262.1| hypothetical protein OsJ_22447 [Oryza sativa Japonica Group]
Length = 876
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 101/410 (24%), Positives = 179/410 (43%), Gaps = 53/410 (12%)
Query: 92 WDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAE 151
W +N + + ++ K +KA +L+ M K G P+V+++T L++ + NA
Sbjct: 383 WTYNSLMYGLV-----KDKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQCDEHDFDNAF 437
Query: 152 AIFRRMQSSGPRPSALTYQIILKLFVEANKFKEA-----------EEVFMTLLDEEKSP- 199
+F M+ +G +P Y ++ +A + +EA +V+ T L + S
Sbjct: 438 RLFEMMEQNGLKPDEHAYAVLTDALCKAGRAEEAYSFIVRKGVALTKVYYTTLIDGFSKA 497
Query: 200 -----------------LKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTY 242
PD + ++++ K +A + M+ RG++ + Y
Sbjct: 498 GNTDFAATLIERMIDEGCTPDSYTYSVLLHALCKQKRLNEALPILDQMSLRGIKCTIFAY 557
Query: 243 NSL---MSFETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLD 299
L M E + ++Y++M +G +P +Y + IN+Y K R E+A + +M
Sbjct: 558 TILIDEMLREGKHDHAKRMYNEMTSSGHKPSATTYTVFINSYCKEGRLEDAEDLILKMER 617
Query: 300 AGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLS-------AYV 352
GV P YNIL+D G +D+A + K M C P+ +Y +L AYV
Sbjct: 618 EGVAPDVVTYNILIDGCGHMGYIDRAFSTLKRMVGASCEPNYWTYCLLLKHLLKGNLAYV 677
Query: 353 NASDMEG---------AEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMR 403
+ D G + R+ + G P V TY +LI G+ K LE+ + D M
Sbjct: 678 RSVDTSGMWNLIELDITWQLLERMVKHGLNPTVTTYSSLIAGFCKAGRLEEACLLLDHMC 737
Query: 404 VNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILL 453
G+ PN+ I+T ++ K F+ A+ + M CGF P ++ +L+
Sbjct: 738 GKGLSPNEDIYTLLIKCCCDTKFFEKALSFVSIMSECGFQPQLESYRLLV 787
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 109/464 (23%), Positives = 201/464 (43%), Gaps = 44/464 (9%)
Query: 62 LVLGTLVRLKQLKKWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSF 121
LVLG R +L+K + ++ + Q NE + +LI KA +
Sbjct: 109 LVLG-YCRTGELRKACWLFLMMPLMGCQR----NEYSYTILIQGLCDAKCVRKALVLFLM 163
Query: 122 MNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANK 181
M + G +P+V + T L+ + GR +A +F M +G PS +TY ++ + + +
Sbjct: 164 MKRDGCSPNVRAFTFLISGLCKSGRVGDARLLFDAMPQNGVVPSVMTYNAMIVGYSKLGR 223
Query: 182 FKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVT 241
+A ++ + EK+ PD ++ +IY E+A +L + G + VT
Sbjct: 224 MNDALKIKELM---EKNGCHPDDWTYNTLIYGLCDQKT-EEAEELLNNAVKEGFTPTVVT 279
Query: 242 YNSLM---SFETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEML 298
+ +L+ + + ++ ++M + + D+ + LIN+ K R +EA + E+
Sbjct: 280 FTNLINGYCMAEKFDDALRMKNKMMSSKCKLDLQVFGKLINSLIKKDRLKEAKELLNEIS 339
Query: 299 DAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDME 358
G+ P Y ++D + SG VD A V K M RD C P+ +Y +++ V +
Sbjct: 340 ANGLVPNVITYTSIIDGYCKSGKVDIALEVLKMMERDGCQPNAWTYNSLMYGLVKDKKLH 399
Query: 359 GAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQ------- 411
A ++++DG +PNVITY TL++G ++ + +++ M NG+KP++
Sbjct: 400 KAMALLTKMQKDGIIPNVITYTTLLQGQCDEHDFDNAFRLFEMMEQNGLKPDEHAYAVLT 459
Query: 412 -------------------------TIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQ 446
+TT++D + K + D A + M G PD
Sbjct: 460 DALCKAGRAEEAYSFIVRKGVALTKVYYTTLIDGFSKAGNTDFAATLIERMIDEGCTPDS 519
Query: 447 KAKNILLSLAKTADERNEANELLGNFNHPNNEPGINGLSISVDE 490
++LL NEA +L + + I +I +DE
Sbjct: 520 YTYSVLLHALCKQKRLNEALPILDQMSLRGIKCTIFAYTILIDE 563
Score = 134 bits (338), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 87/347 (25%), Positives = 167/347 (48%), Gaps = 14/347 (4%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + + +I Y K G + A +VL M + G P+ ++ +LM + + A A+
Sbjct: 346 NVITYTSIIDGYCKSGKVDIALEVLKMMERDGCQPNAWTYNSLMYGLVKDKKLHKAMALL 405
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
+MQ G P+ +TY +L+ + + F A +F + E++ LKPD+ + ++
Sbjct: 406 TKMQKDGIIPNVITYTTLLQGQCDEHDFDNAFRLFEMM---EQNGLKPDEHAYAVLTDAL 462
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSLM---SFETNYKEVSKIYDQMQRAGLQPDV 271
KAG E+A ++ + +GV + V Y +L+ S N + + ++M G PD
Sbjct: 463 CKAGRAEEA---YSFIVRKGVALTKVYYTTLIDGFSKAGNTDFAATLIERMIDEGCTPDS 519
Query: 272 VSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKC 331
+Y++L++A K +R EAL + ++M G++ T AY IL+D G D A+ ++
Sbjct: 520 YTYSVLLHALCKQKRLNEALPILDQMSLRGIKCTIFAYTILIDEMLREGKHDHAKRMYNE 579
Query: 332 MRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNN 391
M P +YT +++Y +E AE +++++G P+V+TY LI G +
Sbjct: 580 MTSSGHKPSATTYTVFINSYCKEGRLEDAEDLILKMEREGVAPDVVTYNILIDGCGHMGY 639
Query: 392 LEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKN-----KDFDSAVVW 433
+++ +M +PN + ++ K + D++ +W
Sbjct: 640 IDRAFSTLKRMVGASCEPNYWTYCLLLKHLLKGNLAYVRSVDTSGMW 686
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 95/380 (25%), Positives = 177/380 (46%), Gaps = 11/380 (2%)
Query: 114 KAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIIL 173
+AE++L+ K+G+ P+VV+ T L+ Y ++ +A + +M SS + + ++
Sbjct: 260 EAEELLNNAVKEGFTPTVVTFTNLINGYCMAEKFDDALRMKNKMMSSKCKLDLQVFGKLI 319
Query: 174 KLFVEANKFKEAEEVFMTLLDE-EKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAE 232
++ ++ KEA+E LL+E + L P+ + +I Y K+G + A ++ +M
Sbjct: 320 NSLIKKDRLKEAKE----LLNEISANGLVPNVITYTSIIDGYCKSGKVDIALEVLKMMER 375
Query: 233 RGVQQSTVTYNSLMSFETNYKEVSK---IYDQMQRAGLQPDVVSYALLINAYGKARREEE 289
G Q + TYNSLM K++ K + +MQ+ G+ P+V++Y L+ +
Sbjct: 376 DGCQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQCDEHDFDN 435
Query: 290 ALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLS 349
A +FE M G++P AY +L DA +G ++A + +R+ + YTT++
Sbjct: 436 AFRLFEMMEQNGLKPDEHAYAVLTDALCKAGRAEEAYSFI--VRKGVALTKV-YYTTLID 492
Query: 350 AYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKP 409
+ A + + A R+ +G P+ TY L+ K L + + I D+M + GIK
Sbjct: 493 GFSKAGNTDFAATLIERMIDEGCTPDSYTYSVLLHALCKQKRLNEALPILDQMSLRGIKC 552
Query: 410 NQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELL 469
+T ++D + D A Y EM S G P + ++ +A +L+
Sbjct: 553 TIFAYTILIDEMLREGKHDHAKRMYNEMTSSGHKPSATTYTVFINSYCKEGRLEDAEDLI 612
Query: 470 GNFNHPNNEPGINGLSISVD 489
P + +I +D
Sbjct: 613 LKMEREGVAPDVVTYNILID 632
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 90/384 (23%), Positives = 166/384 (43%), Gaps = 42/384 (10%)
Query: 153 IFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIY 212
++ ++ G P +TY ++K + + A F LL+ L+P+ + ++
Sbjct: 55 VYSQLVQDGLLPDTVTYNTMIKSYCKEGDLTTAHRYFRLLLE---GGLEPETFTCNALVL 111
Query: 213 MYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSK---IYDQMQRAGLQP 269
Y + G KA LF +M G Q++ +Y L+ + K V K ++ M+R G P
Sbjct: 112 GYCRTGELRKACWLFLMMPLMGCQRNEYSYTILIQGLCDAKCVRKALVLFLMMKRDGCSP 171
Query: 270 DVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVF 329
+V ++ LI+ K+ R +A +F+ M GV P+ YN ++ ++ G ++ A +
Sbjct: 172 NVRAFTFLISGLCKSGRVGDARLLFDAMPQNGVVPSVMTYNAMIVGYSKLGRMNDALKIK 231
Query: 330 KCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYA-- 387
+ M ++ C PD +Y T++ + E AE+ ++GF P V+T+ LI GY
Sbjct: 232 ELMEKNGCHPDDWTYNTLIYGLCD-QKTEEAEELLNNAVKEGFTPTVVTFTNLINGYCMA 290
Query: 388 ---------------------------------KVNNLEKMMEIYDKMRVNGIKPNQTIF 414
K + L++ E+ +++ NG+ PN +
Sbjct: 291 EKFDDALRMKNKMMSSKCKLDLQVFGKLINSLIKKDRLKEAKELLNEISANGLVPNVITY 350
Query: 415 TTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNH 474
T+I+D Y K+ D A+ K ME G P+ N L+ + ++A LL
Sbjct: 351 TSIIDGYCKSGKVDIALEVLKMMERDGCQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQK 410
Query: 475 PNNEPGINGLSISVDEEDDDDDDD 498
P + + + + D+ D D
Sbjct: 411 DGIIPNVITYTTLLQGQCDEHDFD 434
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 80/353 (22%), Positives = 155/353 (43%), Gaps = 5/353 (1%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
LI + K+ +A+++L+ ++ G P+V+++T++++ Y + G+ A + + M+ G
Sbjct: 318 LINSLIKKDRLKEAKELLNEISANGLVPNVITYTSIIDGYCKSGKVDIALEVLKMMERDG 377
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDE-EKSPLKPDQKMFHMMIYMYKKAGGY 220
+P+A TY ++ V+ K +A M LL + +K + P+ + ++ +
Sbjct: 378 CQPNAWTYNSLMYGLVKDKKLHKA----MALLTKMQKDGIIPNVITYTTLLQGQCDEHDF 433
Query: 221 EKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSKIYDQMQRAGLQPDVVSYALLINA 280
+ A +LF +M + G++ Y L + Y + R G+ V Y LI+
Sbjct: 434 DNAFRLFEMMEQNGLKPDEHAYAVLTDALCKAGRAEEAYSFIVRKGVALTKVYYTTLIDG 493
Query: 281 YGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPD 340
+ KA + A + E M+D G P Y++LL A +++A + M
Sbjct: 494 FSKAGNTDFAATLIERMIDEGCTPDSYTYSVLLHALCKQKRLNEALPILDQMSLRGIKCT 553
Query: 341 ICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYD 400
I +YT ++ + + A++ + + G P+ TY I Y K LE ++
Sbjct: 554 IFAYTILIDEMLREGKHDHAKRMYNEMTSSGHKPSATTYTVFINSYCKEGRLEDAEDLIL 613
Query: 401 KMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILL 453
KM G+ P+ + ++D G D A K M P+ +LL
Sbjct: 614 KMEREGVAPDVVTYNILIDGCGHMGYIDRAFSTLKRMVGASCEPNYWTYCLLL 666
Score = 108 bits (270), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 85/378 (22%), Positives = 162/378 (42%), Gaps = 27/378 (7%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
+E + +L A K G +AE+ SF+ +KG A + V +T L++ + + G A +
Sbjct: 451 DEHAYAVLTDALCKAG---RAEEAYSFIVRKGVALTKVYYTTLIDGFSKAGNTDFAATLI 507
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDE-EKSPLKPDQKMFHMMIYM 213
RM G P + TY ++L + + EA + +LD+ +K + ++I
Sbjct: 508 ERMIDEGCTPDSYTYSVLLHALCKQKRLNEA----LPILDQMSLRGIKCTIFAYTILIDE 563
Query: 214 YKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSF---ETNYKEVSKIYDQMQRAGLQPD 270
+ G ++ A++++ M G + S TY ++ E ++ + +M+R G+ PD
Sbjct: 564 MLREGKHDHAKRMYNEMTSSGHKPSATTYTVFINSYCKEGRLEDAEDLILKMEREGVAPD 623
Query: 271 VVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFA-----------IS 319
VV+Y +LI+ G + A + + M+ A P + Y +LL S
Sbjct: 624 VVTYNILIDGCGHMGYIDRAFSTLKRMVGASCEPNYWTYCLLLKHLLKGNLAYVRSVDTS 683
Query: 320 GM-----VDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVP 374
GM +D + + M + +P + +Y+++++ + A +E A + G P
Sbjct: 684 GMWNLIELDITWQLLERMVKHGLNPTVTTYSSLIAGFCKAGRLEEACLLLDHMCGKGLSP 743
Query: 375 NVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWY 434
N Y LIK EK + M G +P + ++ DF+ +
Sbjct: 744 NEDIYTLLIKCCCDTKFFEKALSFVSIMSECGFQPQLESYRLLVVGLCNEGDFEKVKSLF 803
Query: 435 KEMESCGFPPDQKAKNIL 452
++ G+ D+ A IL
Sbjct: 804 CDLLELGYNHDEVAWKIL 821
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 76/323 (23%), Positives = 149/323 (46%), Gaps = 25/323 (7%)
Query: 101 MLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSS 160
+L+ A KQ N+A +L M+ +G ++ ++T L++ R G++ +A+ ++ M SS
Sbjct: 524 VLLHALCKQKRLNEALPILDQMSLRGIKCTIFAYTILIDEMLREGKHDHAKRMYNEMTSS 583
Query: 161 GPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGY 220
G +PSA TY + + + + + ++AE++ +L E+ + PD ++++I G
Sbjct: 584 GHKPSATTYTVFINSYCKEGRLEDAEDL---ILKMEREGVAPDVVTYNILIDGCGHMGYI 640
Query: 221 EKARKLFALMAERGVQQSTVTYNSLM------------SFET----NYKEVS---KIYDQ 261
++A M + + TY L+ S +T N E+ ++ ++
Sbjct: 641 DRAFSTLKRMVGASCEPNYWTYCLLLKHLLKGNLAYVRSVDTSGMWNLIELDITWQLLER 700
Query: 262 MQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGM 321
M + GL P V +Y+ LI + KA R EEA + + M G+ P Y +L+ +
Sbjct: 701 MVKHGLNPTVTTYSSLIAGFCKAGRLEEACLLLDHMCGKGLSPNEDIYTLLIKCCCDTKF 760
Query: 322 VDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGT 381
++A + M P + SY ++ N D E + F L + G+ + + +
Sbjct: 761 FEKALSFVSIMSECGFQPQLESYRLLVVGLCNEGDFEKVKSLFCDLLELGYNHDEVAWKI 820
Query: 382 LIKGYAKVNNLE---KMMEIYDK 401
L G K ++ +M+ I +K
Sbjct: 821 LNDGLLKAGYVDICFQMLSIMEK 843
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 100/218 (45%), Gaps = 3/218 (1%)
Query: 255 VSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLD 314
+ ++Y Q+ + GL PD V+Y +I +Y K A F +L+ G+ P N L+
Sbjct: 52 MGRVYSQLVQDGLLPDTVTYNTMIKSYCKEGDLTTAHRYFRLLLEGGLEPETFTCNALVL 111
Query: 315 AFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVP 374
+ +G + +A +F M C + SYT ++ +A + A F +K+DG P
Sbjct: 112 GYCRTGELRKACWLFLMMPLMGCQRNEYSYTILIQGLCDAKCVRKALVLFLMMKRDGCSP 171
Query: 375 NVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWY 434
NV + LI G K + ++D M NG+ P+ + ++ Y K + A+
Sbjct: 172 NVRAFTFLISGLCKSGRVGDARLLFDAMPQNGVVPSVMTYNAMIVGYSKLGRMNDALKIK 231
Query: 435 KEMESCGFPPDQKAKNILLSLAKTADERN-EANELLGN 471
+ ME G PD N L+ D++ EA ELL N
Sbjct: 232 ELMEKNGCHPDDWTYNTLIY--GLCDQKTEEAEELLNN 267
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/256 (24%), Positives = 106/256 (41%), Gaps = 16/256 (6%)
Query: 99 FLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQ 158
+ + I +Y K+G AE ++ M ++G AP VV++ L++ G G A + +RM
Sbjct: 592 YTVFINSYCKEGRLEDAEDLILKMEREGVAPDVVTYNILIDGCGHMGYIDRAFSTLKRMV 651
Query: 159 SSGPRPSALTYQIILKLFVEAN-------------KFKEAEEVFMTLLDEEKSPLKPDQK 205
+ P+ TY ++LK ++ N E + + L K L P
Sbjct: 652 GASCEPNYWTYCLLLKHLLKGNLAYVRSVDTSGMWNLIELDITWQLLERMVKHGLNPTVT 711
Query: 206 MFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSK---IYDQM 262
+ +I + KAG E+A L M +G+ + Y L+ + K K M
Sbjct: 712 TYSSLIAGFCKAGRLEEACLLLDHMCGKGLSPNEDIYTLLIKCCCDTKFFEKALSFVSIM 771
Query: 263 QRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMV 322
G QP + SY LL+ E+ ++F ++L+ G A+ IL D +G V
Sbjct: 772 SECGFQPQLESYRLLVVGLCNEGDFEKVKSLFCDLLELGYNHDEVAWKILNDGLLKAGYV 831
Query: 323 DQARTVFKCMRRDRCS 338
D + M + C
Sbjct: 832 DICFQMLSIMEKRYCC 847
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 75/170 (44%)
Query: 285 RREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSY 344
R +A+ A + + K YN L + A M + V+ + +D PD +Y
Sbjct: 12 RVSADAIQAIRRTGSARLALSPKCYNFALRSLARFDMTEYMGRVYSQLVQDGLLPDTVTY 71
Query: 345 TTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRV 404
TM+ +Y D+ A ++FR L + G P T L+ GY + L K ++ M +
Sbjct: 72 NTMIKSYCKEGDLTTAHRYFRLLLEGGLEPETFTCNALVLGYCRTGELRKACWLFLMMPL 131
Query: 405 NGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLS 454
G + N+ +T ++ K A+V + M+ G P+ +A L+S
Sbjct: 132 MGCQRNEYSYTILIQGLCDAKCVRKALVLFLMMKRDGCSPNVRAFTFLIS 181
>gi|413952239|gb|AFW84888.1| hypothetical protein ZEAMMB73_407218 [Zea mays]
Length = 668
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 93/413 (22%), Positives = 180/413 (43%), Gaps = 44/413 (10%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + + +L+ A K F +A VL M KG P++V++ ++ R GR +A +
Sbjct: 176 NVVTYTVLLEAMCKNSGFEQAMAVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDARDLL 235
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
R+ S G +P ++Y +LK + ++ + EE+F ++++ P++ F M+I +
Sbjct: 236 NRLFSYGCQPDTVSYTTLLKGLCASKRWDDVEELFAEMMEKN---CMPNEVTFDMLIRFF 292
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVS---KIYDQMQRAGLQPDV 271
+ G E+A ++ M E +T N +++ V K + M G PD
Sbjct: 293 CRGGMVERAIQVLQQMTEHECATNTTLCNIVINSICKQGRVDDAFKFLNNMGSYGCNPDT 352
Query: 272 VSYALLINAYGKARR-----------------------------------EEEALAVFEE 296
+SY ++ +A R E+A+ + E+
Sbjct: 353 ISYTTVLKGLCRAERWNDAKELLKEMVRNNCPPNEVTFNTFICILCQKGLIEQAIMLIEQ 412
Query: 297 MLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASD 356
M + G YN L++ F + G +D A +F+ M C P+ +YTT+L+ NA
Sbjct: 413 MQEHGCTVGVVTYNALVNGFCVQGHIDSALELFRSM---PCKPNTITYTTLLTGLCNAER 469
Query: 357 MEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTT 416
++ A + + PNV+T+ L+ + + L++ +E+ ++M +G PN + T
Sbjct: 470 LDAAAELVAEMLHRDCPPNVVTFNVLVNFFCQKGFLDEAIELVEQMMEHGCTPNLITYNT 529
Query: 417 IMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELL 469
+ D K+ + A+ + S G PD + ++ + D EA ++
Sbjct: 530 LFDGITKDCSSEDALELLHGLVSKGVSPDVITFSSIIGILSKEDRVEEAIQMF 582
Score = 138 bits (347), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 96/412 (23%), Positives = 188/412 (45%), Gaps = 5/412 (1%)
Query: 59 PKDLVLGTLVR-LKQLKKWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEK 117
P + TL++ L K+W+ V E+ + ++ NE+ F MLI + + G +A +
Sbjct: 245 PDTVSYTTLLKGLCASKRWDDVEELFAEMMEKNCMP-NEVTFDMLIRFFCRGGMVERAIQ 303
Query: 118 VLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFV 177
VL M + A + ++ + + GR +A M S G P ++Y +LK
Sbjct: 304 VLQQMTEHECATNTTLCNIVINSICKQGRVDDAFKFLNNMGSYGCNPDTISYTTVLKGLC 363
Query: 178 EANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQ 237
A ++ +A+E+ ++ ++ P++ F+ I + + G E+A L M E G
Sbjct: 364 RAERWNDAKELLKEMV---RNNCPPNEVTFNTFICILCQKGLIEQAIMLIEQMQEHGCTV 420
Query: 238 STVTYNSLMSFETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEM 297
VTYN+L++ + + + +P+ ++Y L+ A R + A + EM
Sbjct: 421 GVVTYNALVNGFCVQGHIDSALELFRSMPCKPNTITYTTLLTGLCNAERLDAAAELVAEM 480
Query: 298 LDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDM 357
L P +N+L++ F G +D+A + + M C+P++ +Y T+
Sbjct: 481 LHRDCPPNVVTFNVLVNFFCQKGFLDEAIELVEQMMEHGCTPNLITYNTLFDGITKDCSS 540
Query: 358 EGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTI 417
E A + L G P+VIT+ ++I +K + +E+ ++++ + G++P ++ I
Sbjct: 541 EDALELLHGLVSKGVSPDVITFSSIIGILSKEDRVEEAIQMFHLAQDIGMRPKALVYNKI 600
Query: 418 MDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELL 469
+ K + D+A+ + M S G P++ IL+ EA +LL
Sbjct: 601 LLGLCKRHEIDNAIDFLAYMVSNGCMPNESTYIILIEGLAREGLLKEAQDLL 652
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 93/366 (25%), Positives = 153/366 (41%), Gaps = 47/366 (12%)
Query: 123 NKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKF 182
++ G AP V T L+ R GR +A + R + SG
Sbjct: 67 SRDGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAEGSG--------------------- 105
Query: 183 KEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTY 242
SP+ D ++ ++ Y + G + AR+L M V TY
Sbjct: 106 ---------------SPV--DVFAYNTLVAGYCRYGHLDAARRLIGSMP---VAPDAYTY 145
Query: 243 NSLMSFETNYKEVS---KIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLD 299
L+ + V+ + D M R G QP+VV+Y +L+ A K E+A+AV +EM
Sbjct: 146 TPLIRVLCDRGRVADALSLLDDMLRRGCQPNVVTYTVLLEAMCKNSGFEQAMAVLDEMRA 205
Query: 300 AGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEG 359
G P YN++++ G VD AR + + C PD SYTT+L + +
Sbjct: 206 KGCTPNIVTYNVIINGMCREGRVDDARDLLNRLFSYGCQPDTVSYTTLLKGLCASKRWDD 265
Query: 360 AEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMD 419
E+ F + + +PN +T+ LI+ + + +E+ +++ +M + N T+ +++
Sbjct: 266 VEELFAEMMEKNCMPNEVTFDMLIRFFCRGGMVERAIQVLQQMTEHECATNTTLCNIVIN 325
Query: 420 AYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNF---NHPN 476
+ K D A + M S G PD + +L A+ N+A ELL N P
Sbjct: 326 SICKQGRVDDAFKFLNNMGSYGCNPDTISYTTVLKGLCRAERWNDAKELLKEMVRNNCPP 385
Query: 477 NEPGIN 482
NE N
Sbjct: 386 NEVTFN 391
Score = 116 bits (290), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 95/411 (23%), Positives = 179/411 (43%), Gaps = 30/411 (7%)
Query: 43 SAVAVLRSERTRGQPLPKDLVLGTLVRLKQLKKWNVVSEVLEWLRIQSWWDFNEMDFLM- 101
+A A R E P P RL++L ++ + + + D D +
Sbjct: 25 AAAAATRPESPNVAPNPAS------ARLRRLIAREDLAGAARLVELSASRDGEAPDVYLC 78
Query: 102 --LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQS 159
LI ++G + A +VL G V ++ L+ Y R G A RR+
Sbjct: 79 TKLIRNLCRRGRTSDAARVLRAAEGSGSPVDVFAYNTLVAGYCRYGHLDAA----RRLIG 134
Query: 160 SGP-RPSALTYQIILKLFVEANKFKEAEEVFMTLLDEE-KSPLKPDQKMFHMMIYMYKKA 217
S P P A TY ++++ + + +A ++LLD+ + +P+ + +++ K
Sbjct: 135 SMPVAPDAYTYTPLIRVLCDRGRVADA----LSLLDDMLRRGCQPNVVTYTVLLEAMCKN 190
Query: 218 GGYEKARKLFALMAERGVQQSTVTYNSL---MSFETNYKEVSKIYDQMQRAGLQPDVVSY 274
G+E+A + M +G + VTYN + M E + + +++ G QPD VSY
Sbjct: 191 SGFEQAMAVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDARDLLNRLFSYGCQPDTVSY 250
Query: 275 ALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRR 334
L+ ++R ++ +F EM++ P +++L+ F GMV++A V + M
Sbjct: 251 TTLLKGLCASKRWDDVEELFAEMMEKNCMPNEVTFDMLIRFFCRGGMVERAIQVLQQMTE 310
Query: 335 DRCSPDICSYTTMLSAYVNASDMEG----AEKFFRRLKQDGFVPNVITYGTLIKGYAKVN 390
C+ + TT+ + +N+ +G A KF + G P+ I+Y T++KG +
Sbjct: 311 HECATN----TTLCNIVINSICKQGRVDDAFKFLNNMGSYGCNPDTISYTTVLKGLCRAE 366
Query: 391 NLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCG 441
E+ +M N PN+ F T + + + A++ ++M+ G
Sbjct: 367 RWNDAKELLKEMVRNNCPPNEVTFNTFICILCQKGLIEQAIMLIEQMQEHG 417
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 70/307 (22%), Positives = 141/307 (45%), Gaps = 10/307 (3%)
Query: 70 LKQLKKWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAP 129
L + ++WN E+L+ + +++ NE+ F I ++G +A ++ M + G
Sbjct: 362 LCRAERWNDAKELLKEM-VRNNCPPNEVTFNTFICILCQKGLIEQAIMLIEQMQEHGCTV 420
Query: 130 SVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVF 189
VV++ AL+ + G +A +FR M +P+ +TY +L A + A E+
Sbjct: 421 GVVTYNALVNGFCVQGHIDSALELFRSMPC---KPNTITYTTLLTGLCNAERLDAAAELV 477
Query: 190 MTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSL---M 246
+L + P+ F++++ + + G ++A +L M E G + +TYN+L +
Sbjct: 478 AEMLHRD---CPPNVVTFNVLVNFFCQKGFLDEAIELVEQMMEHGCTPNLITYNTLFDGI 534
Query: 247 SFETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTH 306
+ + + ++ ++ + G+ PDV++++ +I K R EEA+ +F D G+RP
Sbjct: 535 TKDCSSEDALELLHGLVSKGVSPDVITFSSIIGILSKEDRVEEAIQMFHLAQDIGMRPKA 594
Query: 307 KAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRR 366
YN +L +D A M + C P+ +Y ++ ++ A+
Sbjct: 595 LVYNKILLGLCKRHEIDNAIDFLAYMVSNGCMPNESTYIILIEGLAREGLLKEAQDLLSM 654
Query: 367 LKQDGFV 373
L G V
Sbjct: 655 LCSRGVV 661
>gi|449454139|ref|XP_004144813.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09820-like [Cucumis sativus]
gi|449524964|ref|XP_004169491.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09820-like [Cucumis sativus]
Length = 611
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 81/288 (28%), Positives = 150/288 (52%), Gaps = 6/288 (2%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + F +LI + K + + A KV M +G P+VV++ +L+ G+ A+ +
Sbjct: 302 NSVTFNVLIDGFCKDENLSAALKVFEEMQSQGLKPTVVTYNSLVNGLCNEGKLNEAKVLL 361
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
M SS +P+ +TY ++ + + +EA E+F + K L P+ F+ +++ Y
Sbjct: 362 DEMLSSNLKPNVITYNALINGYCKKKLLEEARELFDNI---GKQGLTPNVITFNTLLHGY 418
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSLM---SFETNYKEVSKIYDQMQRAGLQPDV 271
K G E+A L +M E+G + TYN L+ E +EV + ++MQ G++ D
Sbjct: 419 CKFGKMEEAFLLQKVMLEKGFLPNASTYNCLIVGFCREGKMEEVKNLLNEMQCRGVKADT 478
Query: 272 VSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKC 331
V+Y +LI+A+ + + ++A + +EMLD G++P+H YNILL+ + + G + A + K
Sbjct: 479 VTYNILISAWCEKKEPKKAARLIDEMLDKGLKPSHLTYNILLNGYCMEGNLRAALNLRKQ 538
Query: 332 MRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITY 379
M ++ ++ +Y ++ Y +E A + + G +PN TY
Sbjct: 539 MEKEGRWANVVTYNVLIQGYCRKGKLEDANGLLNEMLEKGLIPNRTTY 586
Score = 135 bits (339), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 87/364 (23%), Positives = 168/364 (46%), Gaps = 9/364 (2%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAY---GRGGRYKNAE 151
N + F +I K G NKA V+ M G+ P+VV++ L++ Y GR G+ A+
Sbjct: 229 NLITFNTVINGLCKVGKLNKAGDVVDDMKVWGFWPNVVTYNTLIDGYCKMGRVGKMYKAD 288
Query: 152 AIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMI 211
AI + M + P+++T+ +++ F + A +VF + + LKP ++ ++
Sbjct: 289 AILKEMVENKVSPNSVTFNVLIDGFCKDENLSAALKVFEEM---QSQGLKPTVVTYNSLV 345
Query: 212 YMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYK---EVSKIYDQMQRAGLQ 268
G +A+ L M ++ + +TYN+L++ K E +++D + + GL
Sbjct: 346 NGLCNEGKLNEAKVLLDEMLSSNLKPNVITYNALINGYCKKKLLEEARELFDNIGKQGLT 405
Query: 269 PDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTV 328
P+V+++ L++ Y K + EEA + + ML+ G P YN L+ F G +++ + +
Sbjct: 406 PNVITFNTLLHGYCKFGKMEEAFLLQKVMLEKGFLPNASTYNCLIVGFCREGKMEEVKNL 465
Query: 329 FKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAK 388
M+ D +Y ++SA+ + + A + + G P+ +TY L+ GY
Sbjct: 466 LNEMQCRGVKADTVTYNILISAWCEKKEPKKAARLIDEMLDKGLKPSHLTYNILLNGYCM 525
Query: 389 VNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKA 448
NL + + +M G N + ++ Y + + A EM G P++
Sbjct: 526 EGNLRAALNLRKQMEKEGRWANVVTYNVLIQGYCRKGKLEDANGLLNEMLEKGLIPNRTT 585
Query: 449 KNIL 452
I+
Sbjct: 586 YEII 589
Score = 135 bits (339), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 85/335 (25%), Positives = 163/335 (48%), Gaps = 11/335 (3%)
Query: 127 YAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAE 186
Y SV+S L+ A + + E +++ M P+ +T+ ++ + K +A
Sbjct: 191 YKLSVLSCNPLLSALVKENEFGGVEFVYKEMIRRKISPNLITFNTVINGLCKVGKLNKAG 250
Query: 187 EVFMTLLDEEKS-PLKPDQKMFHMMIYMYKKAGGYEKARKLFAL---MAERGVQQSTVTY 242
+V +D+ K P+ ++ +I Y K G K K A+ M E V ++VT+
Sbjct: 251 DV----VDDMKVWGFWPNVVTYNTLIDGYCKMGRVGKMYKADAILKEMVENKVSPNSVTF 306
Query: 243 NSLM---SFETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLD 299
N L+ + N K++++MQ GL+P VV+Y L+N + EA + +EML
Sbjct: 307 NVLIDGFCKDENLSAALKVFEEMQSQGLKPTVVTYNSLVNGLCNEGKLNEAKVLLDEMLS 366
Query: 300 AGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEG 359
+ ++P YN L++ + ++++AR +F + + +P++ ++ T+L Y ME
Sbjct: 367 SNLKPNVITYNALINGYCKKKLLEEARELFDNIGKQGLTPNVITFNTLLHGYCKFGKMEE 426
Query: 360 AEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMD 419
A + + + GF+PN TY LI G+ + +E++ + ++M+ G+K + + ++
Sbjct: 427 AFLLQKVMLEKGFLPNASTYNCLIVGFCREGKMEEVKNLLNEMQCRGVKADTVTYNILIS 486
Query: 420 AYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLS 454
A+ + K+ A EM G P NILL+
Sbjct: 487 AWCEKKEPKKAARLIDEMLDKGLKPSHLTYNILLN 521
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 84/371 (22%), Positives = 174/371 (46%), Gaps = 3/371 (0%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
L++A K+ +F E V M ++ +P++++ ++ + G+ A + M+ G
Sbjct: 201 LLSALVKENEFGGVEFVYKEMIRRKISPNLITFNTVINGLCKVGKLNKAGDVVDDMKVWG 260
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
P+ +TY ++ + + + + + L + ++ + P+ F+++I + K
Sbjct: 261 FWPNVVTYNTLIDGYCKMGRVGKMYKADAILKEMVENKVSPNSVTFNVLIDGFCKDENLS 320
Query: 222 KARKLFALMAERGVQQSTVTYNSLMSFETN---YKEVSKIYDQMQRAGLQPDVVSYALLI 278
A K+F M +G++ + VTYNSL++ N E + D+M + L+P+V++Y LI
Sbjct: 321 AALKVFEEMQSQGLKPTVVTYNSLVNGLCNEGKLNEAKVLLDEMLSSNLKPNVITYNALI 380
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCS 338
N Y K + EEA +F+ + G+ P +N LL + G +++A + K M
Sbjct: 381 NGYCKKKLLEEARELFDNIGKQGLTPNVITFNTLLHGYCKFGKMEEAFLLQKVMLEKGFL 440
Query: 339 PDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEI 398
P+ +Y ++ + ME + ++ G + +TY LI + + +K +
Sbjct: 441 PNASTYNCLIVGFCREGKMEEVKNLLNEMQCRGVKADTVTYNILISAWCEKKEPKKAARL 500
Query: 399 YDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKT 458
D+M G+KP+ + +++ Y + +A+ K+ME G + N+L+
Sbjct: 501 IDEMLDKGLKPSHLTYNILLNGYCMEGNLRAALNLRKQMEKEGRWANVVTYNVLIQGYCR 560
Query: 459 ADERNEANELL 469
+ +AN LL
Sbjct: 561 KGKLEDANGLL 571
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 90/344 (26%), Positives = 153/344 (44%), Gaps = 23/344 (6%)
Query: 133 SHTAL-MEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMT 191
S T L +EA+ R G Y+ ++ S P SAL V+ N+F E V+
Sbjct: 174 SKTVLGLEAFKRAGDYRYKLSVL----SCNPLLSAL---------VKENEFGGVEFVYKE 220
Query: 192 LLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETN 251
++ + + P+ F+ +I K G KA + M G + VTYN+L+
Sbjct: 221 MI---RRKISPNLITFNTVINGLCKVGKLNKAGDVVDDMKVWGFWPNVVTYNTLIDGYCK 277
Query: 252 YKEVSKIYD------QMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPT 305
V K+Y +M + P+ V++ +LI+ + K AL VFEEM G++PT
Sbjct: 278 MGRVGKMYKADAILKEMVENKVSPNSVTFNVLIDGFCKDENLSAALKVFEEMQSQGLKPT 337
Query: 306 HKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFR 365
YN L++ G +++A+ + M P++ +Y +++ Y +E A + F
Sbjct: 338 VVTYNSLVNGLCNEGKLNEAKVLLDEMLSSNLKPNVITYNALINGYCKKKLLEEARELFD 397
Query: 366 RLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNK 425
+ + G PNVIT+ TL+ GY K +E+ + M G PN + + ++ + +
Sbjct: 398 NIGKQGLTPNVITFNTLLHGYCKFGKMEEAFLLQKVMLEKGFLPNASTYNCLIVGFCREG 457
Query: 426 DFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELL 469
+ EM+ G D NIL+S E +A L+
Sbjct: 458 KMEEVKNLLNEMQCRGVKADTVTYNILISAWCEKKEPKKAARLI 501
>gi|125556563|gb|EAZ02169.1| hypothetical protein OsI_24261 [Oryza sativa Indica Group]
Length = 991
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 101/410 (24%), Positives = 179/410 (43%), Gaps = 53/410 (12%)
Query: 92 WDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAE 151
W +N + + ++ K +KA +L+ M K G P+V+++T L++ + NA
Sbjct: 498 WTYNSLMYGLV-----KDKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQCDEHDFDNAF 552
Query: 152 AIFRRMQSSGPRPSALTYQIILKLFVEANKFKEA-----------EEVFMTLLDEEKSP- 199
+F M+ +G +P Y ++ +A + +EA +V+ T L + S
Sbjct: 553 RLFEMMEQNGLKPDEHAYAVLTDALCKAGRAEEAYSFIVRKGVALTKVYYTTLIDGFSKA 612
Query: 200 -----------------LKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTY 242
PD + ++++ K +A + M+ RG++ + Y
Sbjct: 613 GNTDFAATLIERMIDEGCTPDSYTYSVLLHALCKQKRLNEALPILDQMSLRGIKCTIFAY 672
Query: 243 NSL---MSFETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLD 299
L M E + ++Y++M +G +P +Y + IN+Y K R E+A + +M
Sbjct: 673 TILIDEMLREGKHDHAKRMYNEMTSSGHKPSATTYTVFINSYCKEGRLEDAEDLILKMER 732
Query: 300 AGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLS-------AYV 352
GV P YNIL+D G +D+A + K M C P+ +Y +L AYV
Sbjct: 733 EGVAPDVVTYNILIDGCGHMGYIDRAFSTLKRMVGASCEPNYWTYCLLLKHLLKGNLAYV 792
Query: 353 NASDMEG---------AEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMR 403
+ D G + R+ + G P V TY +LI G+ K LE+ + D M
Sbjct: 793 RSVDTSGMWNLIELDITWQLLERMVKHGLNPTVTTYSSLIAGFCKAGRLEEACLLLDHMC 852
Query: 404 VNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILL 453
G+ PN+ I+T ++ K F+ A+ + M CGF P ++ +L+
Sbjct: 853 GKGLSPNEDIYTLLIKCCCDTKFFEKALSFVSIMSECGFQPQLESYRLLV 902
Score = 142 bits (357), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 97/401 (24%), Positives = 182/401 (45%), Gaps = 40/401 (9%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
+I +Y K+GD A + + + G P + AL+ Y R G + A +F M G
Sbjct: 189 MIKSYCKEGDLTTAHRCFRLLLEGGLEPETFTCNALVLGYCRTGELRKACWLFLMMPLMG 248
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
+ + +Y I+++ EA +EA +F+ + ++ P+ + F +I K+G
Sbjct: 249 CQRNEYSYTILIQGLCEAKCVREALVLFLMM---KRDGCSPNVRAFTFLISGLCKSGRVG 305
Query: 222 KARKLFALMAERGVQQSTVTYNSLMSFETNYKEVS---KIYDQMQRAGLQPD-------- 270
AR LF M + GV S +TYN+++ + ++ KI + M++ G PD
Sbjct: 306 DARLLFDAMPQNGVVPSVMTYNAMIVGYSKLGRMNDALKIKELMEKNGCHPDDWTYNTLI 365
Query: 271 --------------------------VVSYALLINAYGKARREEEALAVFEEMLDAGVRP 304
VV++ LIN Y A + ++AL + +M+ + +
Sbjct: 366 YGLCDQKTEEAEELLNNAVKEGFTPTVVTFTNLINGYCMAEKFDDALRMKNKMMSSKCKL 425
Query: 305 THKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFF 364
+ + L+++ + +A+ + + + P++ +YT+++ Y + ++ A +
Sbjct: 426 DLQVFGKLINSLIKKDRLKEAKELLNEISANGLVPNVITYTSIIDGYCKSGKVDIALEVL 485
Query: 365 RRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKN 424
+ +++DG PN TY +L+ G K L K M + KM+ +GI PN +TT++
Sbjct: 486 KMMERDGCQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQCDE 545
Query: 425 KDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEA 465
DFD+A ++ ME G PD+ A +L A EA
Sbjct: 546 HDFDNAFRLFEMMEQNGLKPDEHAYAVLTDALCKAGRAEEA 586
Score = 135 bits (340), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 100/431 (23%), Positives = 188/431 (43%), Gaps = 39/431 (9%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
NE + +LI + +A + M + G +P+V + T L+ + GR +A +F
Sbjct: 252 NEYSYTILIQGLCEAKCVREALVLFLMMKRDGCSPNVRAFTFLISGLCKSGRVGDARLLF 311
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
M +G PS +TY ++ + + + +A ++ + EK+ PD ++ +IY
Sbjct: 312 DAMPQNGVVPSVMTYNAMIVGYSKLGRMNDALKIKELM---EKNGCHPDDWTYNTLIYGL 368
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSLM---SFETNYKEVSKIYDQMQRAGLQPDV 271
E+A +L + G + VT+ +L+ + + ++ ++M + + D+
Sbjct: 369 CDQKT-EEAEELLNNAVKEGFTPTVVTFTNLINGYCMAEKFDDALRMKNKMMSSKCKLDL 427
Query: 272 VSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKC 331
+ LIN+ K R +EA + E+ G+ P Y ++D + SG VD A V K
Sbjct: 428 QVFGKLINSLIKKDRLKEAKELLNEISANGLVPNVITYTSIIDGYCKSGKVDIALEVLKM 487
Query: 332 MRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNN 391
M RD C P+ +Y +++ V + A ++++DG +PNVITY TL++G ++
Sbjct: 488 MERDGCQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQCDEHD 547
Query: 392 LEKMMEIYDKMRVNGIKPNQ--------------------------------TIFTTIMD 419
+ +++ M NG+KP++ +TT++D
Sbjct: 548 FDNAFRLFEMMEQNGLKPDEHAYAVLTDALCKAGRAEEAYSFIVRKGVALTKVYYTTLID 607
Query: 420 AYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEP 479
+ K + D A + M G PD ++LL NEA +L + +
Sbjct: 608 GFSKAGNTDFAATLIERMIDEGCTPDSYTYSVLLHALCKQKRLNEALPILDQMSLRGIKC 667
Query: 480 GINGLSISVDE 490
I +I +DE
Sbjct: 668 TIFAYTILIDE 678
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 87/347 (25%), Positives = 167/347 (48%), Gaps = 14/347 (4%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + + +I Y K G + A +VL M + G P+ ++ +LM + + A A+
Sbjct: 461 NVITYTSIIDGYCKSGKVDIALEVLKMMERDGCQPNAWTYNSLMYGLVKDKKLHKAMALL 520
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
+MQ G P+ +TY +L+ + + F A +F + E++ LKPD+ + ++
Sbjct: 521 TKMQKDGIIPNVITYTTLLQGQCDEHDFDNAFRLFEMM---EQNGLKPDEHAYAVLTDAL 577
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSLM---SFETNYKEVSKIYDQMQRAGLQPDV 271
KAG E+A ++ + +GV + V Y +L+ S N + + ++M G PD
Sbjct: 578 CKAGRAEEA---YSFIVRKGVALTKVYYTTLIDGFSKAGNTDFAATLIERMIDEGCTPDS 634
Query: 272 VSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKC 331
+Y++L++A K +R EAL + ++M G++ T AY IL+D G D A+ ++
Sbjct: 635 YTYSVLLHALCKQKRLNEALPILDQMSLRGIKCTIFAYTILIDEMLREGKHDHAKRMYNE 694
Query: 332 MRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNN 391
M P +YT +++Y +E AE +++++G P+V+TY LI G +
Sbjct: 695 MTSSGHKPSATTYTVFINSYCKEGRLEDAEDLILKMEREGVAPDVVTYNILIDGCGHMGY 754
Query: 392 LEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKN-----KDFDSAVVW 433
+++ +M +PN + ++ K + D++ +W
Sbjct: 755 IDRAFSTLKRMVGASCEPNYWTYCLLLKHLLKGNLAYVRSVDTSGMW 801
Score = 130 bits (326), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 95/380 (25%), Positives = 176/380 (46%), Gaps = 11/380 (2%)
Query: 114 KAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIIL 173
+AE++L+ K+G+ P+VV+ T L+ Y ++ +A + +M SS + + ++
Sbjct: 375 EAEELLNNAVKEGFTPTVVTFTNLINGYCMAEKFDDALRMKNKMMSSKCKLDLQVFGKLI 434
Query: 174 KLFVEANKFKEAEEVFMTLLDE-EKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAE 232
++ ++ KEA+E LL+E + L P+ + +I Y K+G + A ++ +M
Sbjct: 435 NSLIKKDRLKEAKE----LLNEISANGLVPNVITYTSIIDGYCKSGKVDIALEVLKMMER 490
Query: 233 RGVQQSTVTYNSLMSFETNYKEVSK---IYDQMQRAGLQPDVVSYALLINAYGKARREEE 289
G Q + TYNSLM K++ K + +MQ+ G+ P+V++Y L+ +
Sbjct: 491 DGCQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQCDEHDFDN 550
Query: 290 ALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLS 349
A +FE M G++P AY +L DA +G ++A + + R + YTT++
Sbjct: 551 AFRLFEMMEQNGLKPDEHAYAVLTDALCKAGRAEEA---YSFIVRKGVALTKVYYTTLID 607
Query: 350 AYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKP 409
+ A + + A R+ +G P+ TY L+ K L + + I D+M + GIK
Sbjct: 608 GFSKAGNTDFAATLIERMIDEGCTPDSYTYSVLLHALCKQKRLNEALPILDQMSLRGIKC 667
Query: 410 NQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELL 469
+T ++D + D A Y EM S G P + ++ +A +L+
Sbjct: 668 TIFAYTILIDEMLREGKHDHAKRMYNEMTSSGHKPSATTYTVFINSYCKEGRLEDAEDLI 727
Query: 470 GNFNHPNNEPGINGLSISVD 489
P + +I +D
Sbjct: 728 LKMEREGVAPDVVTYNILID 747
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 89/384 (23%), Positives = 165/384 (42%), Gaps = 42/384 (10%)
Query: 153 IFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIY 212
++ ++ G P +TY ++K + + A F LL+ L+P+ + ++
Sbjct: 170 VYSQLVQDGLLPDTVTYNTMIKSYCKEGDLTTAHRCFRLLLE---GGLEPETFTCNALVL 226
Query: 213 MYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSK---IYDQMQRAGLQP 269
Y + G KA LF +M G Q++ +Y L+ K V + ++ M+R G P
Sbjct: 227 GYCRTGELRKACWLFLMMPLMGCQRNEYSYTILIQGLCEAKCVREALVLFLMMKRDGCSP 286
Query: 270 DVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVF 329
+V ++ LI+ K+ R +A +F+ M GV P+ YN ++ ++ G ++ A +
Sbjct: 287 NVRAFTFLISGLCKSGRVGDARLLFDAMPQNGVVPSVMTYNAMIVGYSKLGRMNDALKIK 346
Query: 330 KCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYA-- 387
+ M ++ C PD +Y T++ + E AE+ ++GF P V+T+ LI GY
Sbjct: 347 ELMEKNGCHPDDWTYNTLIYGLCD-QKTEEAEELLNNAVKEGFTPTVVTFTNLINGYCMA 405
Query: 388 ---------------------------------KVNNLEKMMEIYDKMRVNGIKPNQTIF 414
K + L++ E+ +++ NG+ PN +
Sbjct: 406 EKFDDALRMKNKMMSSKCKLDLQVFGKLINSLIKKDRLKEAKELLNEISANGLVPNVITY 465
Query: 415 TTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNH 474
T+I+D Y K+ D A+ K ME G P+ N L+ + ++A LL
Sbjct: 466 TSIIDGYCKSGKVDIALEVLKMMERDGCQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQK 525
Query: 475 PNNEPGINGLSISVDEEDDDDDDD 498
P + + + + D+ D D
Sbjct: 526 DGIIPNVITYTTLLQGQCDEHDFD 549
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 80/353 (22%), Positives = 155/353 (43%), Gaps = 5/353 (1%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
LI + K+ +A+++L+ ++ G P+V+++T++++ Y + G+ A + + M+ G
Sbjct: 433 LINSLIKKDRLKEAKELLNEISANGLVPNVITYTSIIDGYCKSGKVDIALEVLKMMERDG 492
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDE-EKSPLKPDQKMFHMMIYMYKKAGGY 220
+P+A TY ++ V+ K +A M LL + +K + P+ + ++ +
Sbjct: 493 CQPNAWTYNSLMYGLVKDKKLHKA----MALLTKMQKDGIIPNVITYTTLLQGQCDEHDF 548
Query: 221 EKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSKIYDQMQRAGLQPDVVSYALLINA 280
+ A +LF +M + G++ Y L + Y + R G+ V Y LI+
Sbjct: 549 DNAFRLFEMMEQNGLKPDEHAYAVLTDALCKAGRAEEAYSFIVRKGVALTKVYYTTLIDG 608
Query: 281 YGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPD 340
+ KA + A + E M+D G P Y++LL A +++A + M
Sbjct: 609 FSKAGNTDFAATLIERMIDEGCTPDSYTYSVLLHALCKQKRLNEALPILDQMSLRGIKCT 668
Query: 341 ICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYD 400
I +YT ++ + + A++ + + G P+ TY I Y K LE ++
Sbjct: 669 IFAYTILIDEMLREGKHDHAKRMYNEMTSSGHKPSATTYTVFINSYCKEGRLEDAEDLIL 728
Query: 401 KMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILL 453
KM G+ P+ + ++D G D A K M P+ +LL
Sbjct: 729 KMEREGVAPDVVTYNILIDGCGHMGYIDRAFSTLKRMVGASCEPNYWTYCLLL 781
Score = 108 bits (269), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 85/378 (22%), Positives = 162/378 (42%), Gaps = 27/378 (7%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
+E + +L A K G +AE+ SF+ +KG A + V +T L++ + + G A +
Sbjct: 566 DEHAYAVLTDALCKAG---RAEEAYSFIVRKGVALTKVYYTTLIDGFSKAGNTDFAATLI 622
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDE-EKSPLKPDQKMFHMMIYM 213
RM G P + TY ++L + + EA + +LD+ +K + ++I
Sbjct: 623 ERMIDEGCTPDSYTYSVLLHALCKQKRLNEA----LPILDQMSLRGIKCTIFAYTILIDE 678
Query: 214 YKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSF---ETNYKEVSKIYDQMQRAGLQPD 270
+ G ++ A++++ M G + S TY ++ E ++ + +M+R G+ PD
Sbjct: 679 MLREGKHDHAKRMYNEMTSSGHKPSATTYTVFINSYCKEGRLEDAEDLILKMEREGVAPD 738
Query: 271 VVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFA-----------IS 319
VV+Y +LI+ G + A + + M+ A P + Y +LL S
Sbjct: 739 VVTYNILIDGCGHMGYIDRAFSTLKRMVGASCEPNYWTYCLLLKHLLKGNLAYVRSVDTS 798
Query: 320 GM-----VDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVP 374
GM +D + + M + +P + +Y+++++ + A +E A + G P
Sbjct: 799 GMWNLIELDITWQLLERMVKHGLNPTVTTYSSLIAGFCKAGRLEEACLLLDHMCGKGLSP 858
Query: 375 NVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWY 434
N Y LIK EK + M G +P + ++ DF+ +
Sbjct: 859 NEDIYTLLIKCCCDTKFFEKALSFVSIMSECGFQPQLESYRLLVVGLCNEGDFEKVKSLF 918
Query: 435 KEMESCGFPPDQKAKNIL 452
++ G+ D+ A IL
Sbjct: 919 CDLLELGYNHDEVAWKIL 936
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 76/323 (23%), Positives = 149/323 (46%), Gaps = 25/323 (7%)
Query: 101 MLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSS 160
+L+ A KQ N+A +L M+ +G ++ ++T L++ R G++ +A+ ++ M SS
Sbjct: 639 VLLHALCKQKRLNEALPILDQMSLRGIKCTIFAYTILIDEMLREGKHDHAKRMYNEMTSS 698
Query: 161 GPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGY 220
G +PSA TY + + + + + ++AE++ +L E+ + PD ++++I G
Sbjct: 699 GHKPSATTYTVFINSYCKEGRLEDAEDL---ILKMEREGVAPDVVTYNILIDGCGHMGYI 755
Query: 221 EKARKLFALMAERGVQQSTVTYNSLM------------SFET----NYKEVS---KIYDQ 261
++A M + + TY L+ S +T N E+ ++ ++
Sbjct: 756 DRAFSTLKRMVGASCEPNYWTYCLLLKHLLKGNLAYVRSVDTSGMWNLIELDITWQLLER 815
Query: 262 MQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGM 321
M + GL P V +Y+ LI + KA R EEA + + M G+ P Y +L+ +
Sbjct: 816 MVKHGLNPTVTTYSSLIAGFCKAGRLEEACLLLDHMCGKGLSPNEDIYTLLIKCCCDTKF 875
Query: 322 VDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGT 381
++A + M P + SY ++ N D E + F L + G+ + + +
Sbjct: 876 FEKALSFVSIMSECGFQPQLESYRLLVVGLCNEGDFEKVKSLFCDLLELGYNHDEVAWKI 935
Query: 382 LIKGYAKVNNLE---KMMEIYDK 401
L G K ++ +M+ I +K
Sbjct: 936 LNDGLLKAGYVDICFQMLSIMEK 958
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 79/327 (24%), Positives = 138/327 (42%), Gaps = 17/327 (5%)
Query: 156 RMQSSGPRPSALTYQIILKLFVEANKFK---EAEEVFMTLLDEEKSPLKPDQKMFHMMIY 212
R +S+ P P+ T + + F+ ++ + LL ++P + ++ + M+
Sbjct: 62 RAESTAPEPA--TALAFFEWLARRDGFRHTADSHAALLHLLSRRRAPAQYERLVVSMLNC 119
Query: 213 ------MYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFE-TNYKEVSKIYDQMQRA 265
M A + R+ + + SL F+ T Y + ++Y Q+ +
Sbjct: 120 SDTAEDMRVSADAIQAIRRTGSARLALSPKCYNFALRSLARFDMTEY--MGRVYSQLVQD 177
Query: 266 GLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQA 325
GL PD V+Y +I +Y K A F +L+ G+ P N L+ + +G + +A
Sbjct: 178 GLLPDTVTYNTMIKSYCKEGDLTTAHRCFRLLLEGGLEPETFTCNALVLGYCRTGELRKA 237
Query: 326 RTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKG 385
+F M C + SYT ++ A + A F +K+DG PNV + LI G
Sbjct: 238 CWLFLMMPLMGCQRNEYSYTILIQGLCEAKCVREALVLFLMMKRDGCSPNVRAFTFLISG 297
Query: 386 YAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPD 445
K + ++D M NG+ P+ + ++ Y K + A+ + ME G PD
Sbjct: 298 LCKSGRVGDARLLFDAMPQNGVVPSVMTYNAMIVGYSKLGRMNDALKIKELMEKNGCHPD 357
Query: 446 QKAKNILLSLAKTADERN-EANELLGN 471
N L+ D++ EA ELL N
Sbjct: 358 DWTYNTLIY--GLCDQKTEEAEELLNN 382
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 63/256 (24%), Positives = 106/256 (41%), Gaps = 16/256 (6%)
Query: 99 FLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQ 158
+ + I +Y K+G AE ++ M ++G AP VV++ L++ G G A + +RM
Sbjct: 707 YTVFINSYCKEGRLEDAEDLILKMEREGVAPDVVTYNILIDGCGHMGYIDRAFSTLKRMV 766
Query: 159 SSGPRPSALTYQIILKLFVEAN-------------KFKEAEEVFMTLLDEEKSPLKPDQK 205
+ P+ TY ++LK ++ N E + + L K L P
Sbjct: 767 GASCEPNYWTYCLLLKHLLKGNLAYVRSVDTSGMWNLIELDITWQLLERMVKHGLNPTVT 826
Query: 206 MFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSK---IYDQM 262
+ +I + KAG E+A L M +G+ + Y L+ + K K M
Sbjct: 827 TYSSLIAGFCKAGRLEEACLLLDHMCGKGLSPNEDIYTLLIKCCCDTKFFEKALSFVSIM 886
Query: 263 QRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMV 322
G QP + SY LL+ E+ ++F ++L+ G A+ IL D +G V
Sbjct: 887 SECGFQPQLESYRLLVVGLCNEGDFEKVKSLFCDLLELGYNHDEVAWKILNDGLLKAGYV 946
Query: 323 DQARTVFKCMRRDRCS 338
D + M + C
Sbjct: 947 DICFQMLSIMEKRYCC 962
>gi|297835316|ref|XP_002885540.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297331380|gb|EFH61799.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 841
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 108/453 (23%), Positives = 203/453 (44%), Gaps = 40/453 (8%)
Query: 68 VRLKQLKKWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGY 127
+ LK+ +W E+ EW + + ++ N + + +++ GK + + + M +KG
Sbjct: 158 IILKEQTRWERAVEIFEWFKSKGCYELNVIHYNIMLRILGKACKWRYVQSLWDEMIRKGI 217
Query: 128 APSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEE 187
P ++ L++ Y +GG +A +M G +P +T I+L+++ +A +F++AEE
Sbjct: 218 KPINSTYGTLIDVYSKGGLKVHALCWLGKMSKIGMQPDEVTTGIVLQMYKKAREFQKAEE 277
Query: 188 VFMTL-LDEEK--SPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNS 244
F DE K S + ++ MI Y K+G ++A + F M E G+ +TVT+N+
Sbjct: 278 FFKKWSCDENKADSHVCLSSYTYNTMIDTYGKSGQIKEASETFKRMLEEGIVPTTVTFNT 337
Query: 245 LMSFETN---YKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAG 301
++ N + EV+ + M + PD +Y +LI+ + K E A F+EM AG
Sbjct: 338 MIHVYGNNGQFGEVTSLMKTM-KFHCAPDTRTYNILISLHTKNNDIERAGTYFKEMKGAG 396
Query: 302 VRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAE 361
++P +Y LL AF+I MV +A + M + D + + + Y+ A +E +
Sbjct: 397 LKPDPVSYRTLLYAFSIRHMVKEAEELIAEMDDNDVEIDEYTQSALTRMYIEAEMLEKSW 456
Query: 362 KFFRR------LKQDGFVPNVITYG---------------------------TLIKGYAK 388
+F+R + +G+ N+ YG +IK Y
Sbjct: 457 SWFKRFHVAGNMSSEGYSANIDAYGERGYLSEAERVFICCQEVNKRTVLEYNVMIKAYGI 516
Query: 389 VNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKA 448
+ EK E+++ M G+ P++ + T++ D A + ++M G+ D
Sbjct: 517 SKSCEKACELFESMMSYGVTPDKCTYNTLVQILASADMPDKAKCYLEKMRETGYVSDCIP 576
Query: 449 KNILLSLAKTADERNEANELLGNFNHPNNEPGI 481
++S + N A E+ N EP +
Sbjct: 577 YCAVISSFVKLGQLNMAEEVYKEMVEYNIEPDV 609
Score = 128 bits (322), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 105/448 (23%), Positives = 187/448 (41%), Gaps = 61/448 (13%)
Query: 73 LKKWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVV 132
KKW+ + S + +N M I YGK G +A + M ++G P+ V
Sbjct: 279 FKKWSCDENKADSHVCLSSYTYNTM-----IDTYGKSGQIKEASETFKRMLEEGIVPTTV 333
Query: 133 SHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTL 192
+ ++ YG G++ ++ + M+ P TY I++ L + N + A F +
Sbjct: 334 TFNTMIHVYGNNGQFGEVTSLMKTMKFHCA-PDTRTYNILISLHTKNNDIERAGTYFKEM 392
Query: 193 LDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSL--MSFET 250
+ + LKPD + ++Y + ++A +L A M + V+ T ++L M E
Sbjct: 393 ---KGAGLKPDPVSYRTLLYAFSIRHMVKEAEELIAEMDDNDVEIDEYTQSALTRMYIEA 449
Query: 251 NYKEVS-------KIYDQMQRAGLQPD---------------------------VVSYAL 276
E S + M G + V+ Y +
Sbjct: 450 EMLEKSWSWFKRFHVAGNMSSEGYSANIDAYGERGYLSEAERVFICCQEVNKRTVLEYNV 509
Query: 277 LINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDR 336
+I AYG ++ E+A +FE M+ GV P YN L+ A + M D+A+ + MR
Sbjct: 510 MIKAYGISKSCEKACELFESMMSYGVTPDKCTYNTLVQILASADMPDKAKCYLEKMRETG 569
Query: 337 CSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMM 396
D Y ++S++V + AE+ ++ + + P+V+ YG LI +A N+++ M
Sbjct: 570 YVSDCIPYCAVISSFVKLGQLNMAEEVYKEMVEYNIEPDVVVYGVLINAFADTGNVQQAM 629
Query: 397 EIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSA-VVWYKEMESCGFP--PDQKAKNILL 453
+ M+ GI N I+ +++ Y K D A ++ K + SC PD N ++
Sbjct: 630 SYVEAMKEAGIPENSVIYNSLIKLYTKVGYLDEAEAIYRKLLRSCNETQYPDVYTSNCMI 689
Query: 454 SLA-------------KTADERNEANEL 468
+L ++ +R EANE
Sbjct: 690 NLYSQRSMVRKAEAIFESMKQRREANEF 717
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 92/374 (24%), Positives = 174/374 (46%), Gaps = 17/374 (4%)
Query: 134 HTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLL 193
++A ++AYG G AE +F Q R + L Y +++K + + ++A E+F +++
Sbjct: 473 YSANIDAYGERGYLSEAERVFICCQEVNKR-TVLEYNVMIKAYGISKSCEKACELFESMM 531
Query: 194 DEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYK 253
+ PD+ ++ ++ + A +KA+ M E G + Y +++S
Sbjct: 532 S---YGVTPDKCTYNTLVQILASADMPDKAKCYLEKMRETGYVSDCIPYCAVISSFVKLG 588
Query: 254 EVS---KIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYN 310
+++ ++Y +M ++PDVV Y +LINA+ ++A++ E M +AG+ YN
Sbjct: 589 QLNMAEEVYKEMVEYNIEPDVVVYGVLINAFADTGNVQQAMSYVEAMKEAGIPENSVIYN 648
Query: 311 ILLDAFAISGMVDQARTVFKCMRRDRCS----PDICSYTTMLSAYVNASDMEGAEKFFRR 366
L+ + G +D+A +++ + R C+ PD+ + M++ Y S + AE F
Sbjct: 649 SLIKLYTKVGYLDEAEAIYRKLLRS-CNETQYPDVYTSNCMINLYSQRSMVRKAEAIFES 707
Query: 367 LKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKD 426
+KQ N T+ ++ Y K E+ +I +MR I + + +++ Y +
Sbjct: 708 MKQRR-EANEFTFAMMLCMYKKNGRFEEATQIAKQMREMRILTDPLSYNSVLGLYALDGR 766
Query: 427 FDSAVVWYKEMESCGFPPD----QKAKNILLSLAKTADERNEANELLGNFNHPNNEPGIN 482
F AV +KEM S G PD + IL+ L + + E+ E I+
Sbjct: 767 FKEAVETFKEMVSSGIQPDDSTFKSLGTILIKLGMSKKAVRKIEEIRKKEIKRGLELWIS 826
Query: 483 GLSISVDEEDDDDD 496
LS V ED +D+
Sbjct: 827 TLSSLVGIEDCEDE 840
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 63/264 (23%), Positives = 119/264 (45%), Gaps = 2/264 (0%)
Query: 97 MDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRR 156
+ + +I+++ K G N AE+V M + P VV + L+ A+ G + A +
Sbjct: 575 IPYCAVISSFVKLGQLNMAEEVYKEMVEYNIEPDVVVYGVLINAFADTGNVQQAMSYVEA 634
Query: 157 MQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKK 216
M+ +G +++ Y ++KL+ + EAE ++ LL PD + MI +Y +
Sbjct: 635 MKEAGIPENSVIYNSLIKLYTKVGYLDEAEAIYRKLLRSCNETQYPDVYTSNCMINLYSQ 694
Query: 217 AGGYEKARKLFALMAERGVQQSTVTYNSLMSFETN--YKEVSKIYDQMQRAGLQPDVVSY 274
KA +F M +R L ++ N ++E ++I QM+ + D +SY
Sbjct: 695 RSMVRKAEAIFESMKQRREANEFTFAMMLCMYKKNGRFEEATQIAKQMREMRILTDPLSY 754
Query: 275 ALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRR 334
++ Y R +EA+ F+EM+ +G++P + L GM +A + +R+
Sbjct: 755 NSVLGLYALDGRFKEAVETFKEMVSSGIQPDDSTFKSLGTILIKLGMSKKAVRKIEEIRK 814
Query: 335 DRCSPDICSYTTMLSAYVNASDME 358
+ + + LS+ V D E
Sbjct: 815 KEIKRGLELWISTLSSLVGIEDCE 838
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 50/98 (51%), Gaps = 4/98 (4%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
NE F M++ Y K G F +A ++ M + +S+ +++ Y GR+K A F
Sbjct: 715 NEFTFAMMLCMYKKNGRFEEATQIAKQMREMRILTDPLSYNSVLGLYALDGRFKEAVETF 774
Query: 155 RRMQSSGPRPSALTYQ----IILKLFVEANKFKEAEEV 188
+ M SSG +P T++ I++KL + ++ EE+
Sbjct: 775 KEMVSSGIQPDDSTFKSLGTILIKLGMSKKAVRKIEEI 812
>gi|414875530|tpg|DAA52661.1| TPA: hypothetical protein ZEAMMB73_467633 [Zea mays]
Length = 987
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 100/401 (24%), Positives = 184/401 (45%), Gaps = 15/401 (3%)
Query: 92 WDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAE 151
W +N + + + G ++AE++L+ +G+ P+V++ T L+ Y + R +A
Sbjct: 355 WTYNSLIYGLC------GGKLDEAEELLNGAIARGFTPTVITFTNLINGYCKAERIDDAL 408
Query: 152 AIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMI 211
+ M SS + Y +++ + ++ + KEA+E TL + + L P+ ++ +I
Sbjct: 409 RVKSNMISSNCKLDLQAYGVLINVLIKKCRLKEAKE---TLNEMFANGLAPNVVIYTSII 465
Query: 212 YMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSK---IYDQMQRAGLQ 268
Y K G A ++F LM G + TY SL+ K++ K + +MQ G+
Sbjct: 466 DGYCKVGMVGAALEVFKLMEHEGCHPNAWTYGSLIYGLIQDKKLHKAMALITKMQEDGIT 525
Query: 269 PDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTV 328
P V++Y LI K + A +FE M G+ P +AYN+L DA SG ++A +
Sbjct: 526 PGVIAYTTLIQGQCKKHEFDNAFRLFEMMEKNGLTPDEQAYNVLTDALCKSGRAEEAYSF 585
Query: 329 FKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAK 388
+R+ + +YT+++ + A + + A ++ +G ++ TY L++ K
Sbjct: 586 L--VRKGVVLTKV-TYTSLVDGFSKAGNTDFAAVLIEKMVNEGCKADLYTYSVLLQALCK 642
Query: 389 VNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKA 448
L + + I D+M V+G+K N +T I+ K D A + EM S G P
Sbjct: 643 QKKLNEALSILDQMTVSGVKCNIVAYTIIISEMIKEGKHDHAKSLFNEMISSGHKPSATT 702
Query: 449 KNILLSLAKTADERNEANELLGNFNHPNNEPGINGLSISVD 489
+ +S + EA L+G P + I ++
Sbjct: 703 YTVFISSYCKIGQIEEAEHLIGEMERDGVTPDVVTYHIFIN 743
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 107/404 (26%), Positives = 177/404 (43%), Gaps = 38/404 (9%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
+I AY K+G A + + + G + AL+ Y R + A + M G
Sbjct: 185 MIMAYCKKGSLAIAHRYFCLLRESGMQMDTYTCNALLLGYCRTSDLRKACWLLMMMPLMG 244
Query: 162 PRPSALTYQIILKLFVEANKFKEAEE-VFMT----------------------------- 191
R + +Y I+++ EA +EA VFM
Sbjct: 245 CRRNEYSYTILIQGLYEARCVREALVLVFMMVQDGCSLNLHMYTLLIKGLCKEGRIHDAR 304
Query: 192 -LLDEEKSPLK---PDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMS 247
LLDE PL+ P ++ MI Y K+G + A + ALM + G TYNSL+
Sbjct: 305 GLLDE--MPLRGVVPSVWTYNAMIDGYCKSGRMKDALGIKALMEQNGCNPDDWTYNSLIY 362
Query: 248 FETNYK--EVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPT 305
K E ++ + G P V+++ LIN Y KA R ++AL V M+ + +
Sbjct: 363 GLCGGKLDEAEELLNGAIARGFTPTVITFTNLINGYCKAERIDDALRVKSNMISSNCKLD 422
Query: 306 HKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFR 365
+AY +L++ + +A+ M + +P++ YT+++ Y + A + F+
Sbjct: 423 LQAYGVLINVLIKKCRLKEAKETLNEMFANGLAPNVVIYTSIIDGYCKVGMVGAALEVFK 482
Query: 366 RLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNK 425
++ +G PN TYG+LI G + L K M + KM+ +GI P +TT++ K
Sbjct: 483 LMEHEGCHPNAWTYGSLIYGLIQDKKLHKAMALITKMQEDGITPGVIAYTTLIQGQCKKH 542
Query: 426 DFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELL 469
+FD+A ++ ME G PD++A N+L + EA L
Sbjct: 543 EFDNAFRLFEMMEKNGLTPDEQAYNVLTDALCKSGRAEEAYSFL 586
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 100/450 (22%), Positives = 177/450 (39%), Gaps = 68/450 (15%)
Query: 82 VLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAY 141
VL ++ +Q N + +LI K+G + A +L M +G PSV ++ A+++ Y
Sbjct: 270 VLVFMMVQDGCSLNLHMYTLLIKGLCKEGRIHDARGLLDEMPLRGVVPSVWTYNAMIDGY 329
Query: 142 GRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLK 201
+ GR K+A I M+ +G P TY ++ K EAEE+ + +P
Sbjct: 330 CKSGRMKDALGIKALMEQNGCNPDDWTYNSLIYGLC-GGKLDEAEELLNGAIARGFTP-- 386
Query: 202 PDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSKIYDQ 261
+I GY KA ++ + ++
Sbjct: 387 -------TVITFTNLINGYCKAERI--------------------------DDALRVKSN 413
Query: 262 MQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGM 321
M + + D+ +Y +LIN K R +EA EM G+ P Y ++D + GM
Sbjct: 414 MISSNCKLDLQAYGVLINVLIKKCRLKEAKETLNEMFANGLAPNVVIYTSIIDGYCKVGM 473
Query: 322 VDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGT 381
V A VFK M + C P+ +Y +++ + + A ++++DG P VI Y T
Sbjct: 474 VGAALEVFKLMEHEGCHPNAWTYGSLIYGLIQDKKLHKAMALITKMQEDGITPGVIAYTT 533
Query: 382 LIKGYAKVNNLEKMMEIYDKMRVNGIKPNQ------------------------------ 411
LI+G K + + +++ M NG+ P++
Sbjct: 534 LIQGQCKKHEFDNAFRLFEMMEKNGLTPDEQAYNVLTDALCKSGRAEEAYSFLVRKGVVL 593
Query: 412 --TIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELL 469
+T+++D + K + D A V ++M + G D ++LL + NEA +L
Sbjct: 594 TKVTYTSLVDGFSKAGNTDFAAVLIEKMVNEGCKADLYTYSVLLQALCKQKKLNEALSIL 653
Query: 470 GNFNHPNNEPGINGLSISVDEEDDDDDDDE 499
+ I +I + E + D
Sbjct: 654 DQMTVSGVKCNIVAYTIIISEMIKEGKHDH 683
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 97/474 (20%), Positives = 194/474 (40%), Gaps = 100/474 (21%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + + +I Y K G A +V M +G P+ ++ +L+ + + A A+
Sbjct: 457 NVVIYTSIIDGYCKVGMVGAALEVFKLMEHEGCHPNAWTYGSLIYGLIQDKKLHKAMALI 516
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
+MQ G P + Y +++ + ++F A +F + EK+ L PD++ ++++
Sbjct: 517 TKMQEDGITPGVIAYTTLIQGQCKKHEFDNAFRLFEMM---EKNGLTPDEQAYNVLTDAL 573
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSL----------------------------- 245
K+G E+A ++ + +GV + VTY SL
Sbjct: 574 CKSGRAEEA---YSFLVRKGVVLTKVTYTSLVDGFSKAGNTDFAAVLIEKMVNEGCKADL 630
Query: 246 ---------MSFETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEE 296
+ + E I DQM +G++ ++V+Y ++I+ K + + A ++F E
Sbjct: 631 YTYSVLLQALCKQKKLNEALSILDQMTVSGVKCNIVAYTIIISEMIKEGKHDHAKSLFNE 690
Query: 297 MLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSA------ 350
M+ +G +P+ Y + + ++ G +++A + M RD +PD+ +Y ++
Sbjct: 691 MISSGHKPSATTYTVFISSYCKIGQIEEAEHLIGEMERDGVTPDVVTYHIFINGCGHMGY 750
Query: 351 ---------------------------------------YVNASDM------EGAEKFFR 365
Y++ S M +
Sbjct: 751 MDRAFSTLKRMVDASCEPNCWTYWLLLKHFLKMSLINAHYIDTSGMWNWIELNTVWQLLE 810
Query: 366 RLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNK 425
R+ + G P V+TY ++I G+ K LE+ + D M I PN+ I+T ++ K
Sbjct: 811 RMMKHGLNPTVVTYSSIIAGFCKATRLEEACVLLDHMLGKAISPNEEIYTMLIKCCCDIK 870
Query: 426 DFDSAVVWYKEMESCGFPPDQKAKN-ILLSLAKTAD---ERNEANELLG-NFNH 474
F V + +M GF P ++ + +++ L D ++ +LLG ++NH
Sbjct: 871 LFGKDVSFVTDMIEFGFQPQLESYHYLIVGLCDEGDYDRAKSLFCDLLGMDYNH 924
Score = 115 bits (288), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 78/353 (22%), Positives = 155/353 (43%), Gaps = 3/353 (0%)
Query: 101 MLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSS 160
+LI K+ +A++ L+ M G AP+VV +T++++ Y + G A +F+ M+
Sbjct: 428 VLINVLIKKCRLKEAKETLNEMFANGLAPNVVIYTSIIDGYCKVGMVGAALEVFKLMEHE 487
Query: 161 GPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGY 220
G P+A TY ++ ++ K +A + + ++ + P + +I K +
Sbjct: 488 GCHPNAWTYGSLIYGLIQDKKLHKAMALITKM---QEDGITPGVIAYTTLIQGQCKKHEF 544
Query: 221 EKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSKIYDQMQRAGLQPDVVSYALLINA 280
+ A +LF +M + G+ YN L + Y + R G+ V+Y L++
Sbjct: 545 DNAFRLFEMMEKNGLTPDEQAYNVLTDALCKSGRAEEAYSFLVRKGVVLTKVTYTSLVDG 604
Query: 281 YGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPD 340
+ KA + A + E+M++ G + Y++LL A +++A ++ M +
Sbjct: 605 FSKAGNTDFAAVLIEKMVNEGCKADLYTYSVLLQALCKQKKLNEALSILDQMTVSGVKCN 664
Query: 341 ICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYD 400
I +YT ++S + + A+ F + G P+ TY I Y K+ +E+ +
Sbjct: 665 IVAYTIIISEMIKEGKHDHAKSLFNEMISSGHKPSATTYTVFISSYCKIGQIEEAEHLIG 724
Query: 401 KMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILL 453
+M +G+ P+ + ++ G D A K M P+ +LL
Sbjct: 725 EMERDGVTPDVVTYHIFINGCGHMGYMDRAFSTLKRMVDASCEPNCWTYWLLL 777
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 88/378 (23%), Positives = 167/378 (44%), Gaps = 27/378 (7%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
+E + +L A K G +AE+ SF+ +KG + V++T+L++ + + G A +
Sbjct: 562 DEQAYNVLTDALCKSG---RAEEAYSFLVRKGVVLTKVTYTSLVDGFSKAGNTDFAAVLI 618
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEK-SPLKPDQKMFHMMIYM 213
+M + G + TY ++L+ + K EA +++LD+ S +K + + ++I
Sbjct: 619 EKMVNEGCKADLYTYSVLLQALCKQKKLNEA----LSILDQMTVSGVKCNIVAYTIIISE 674
Query: 214 YKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFET---NYKEVSKIYDQMQRAGLQPD 270
K G ++ A+ LF M G + S TY +S +E + +M+R G+ PD
Sbjct: 675 MIKEGKHDHAKSLFNEMISSGHKPSATTYTVFISSYCKIGQIEEAEHLIGEMERDGVTPD 734
Query: 271 VVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFA-----------IS 319
VV+Y + IN G + A + + M+DA P Y +LL F S
Sbjct: 735 VVTYHIFINGCGHMGYMDRAFSTLKRMVDASCEPNCWTYWLLLKHFLKMSLINAHYIDTS 794
Query: 320 GMVD--QARTVFKCMRR---DRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVP 374
GM + + TV++ + R +P + +Y+++++ + A+ +E A + P
Sbjct: 795 GMWNWIELNTVWQLLERMMKHGLNPTVVTYSSIIAGFCKATRLEEACVLLDHMLGKAISP 854
Query: 375 NVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWY 434
N Y LIK + K + M G +P + ++ D+D A +
Sbjct: 855 NEEIYTMLIKCCCDIKLFGKDVSFVTDMIEFGFQPQLESYHYLIVGLCDEGDYDRAKSLF 914
Query: 435 KEMESCGFPPDQKAKNIL 452
++ + ++ A IL
Sbjct: 915 CDLLGMDYNHNEVAWKIL 932
Score = 95.1 bits (235), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 72/284 (25%), Positives = 120/284 (42%), Gaps = 8/284 (2%)
Query: 200 LKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLM---SFETNYKEVS 256
L PD ++ MI Y K G A + F L+ E G+Q T T N+L+ ++ ++
Sbjct: 175 LLPDTVTYNTMIMAYCKKGSLAIAHRYFCLLRESGMQMDTYTCNALLLGYCRTSDLRKAC 234
Query: 257 KIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAF 316
+ M G + + SY +LI +AR EAL + M+ G Y +L+
Sbjct: 235 WLLMMMPLMGCRRNEYSYTILIQGLYEARCVREALVLVFMMVQDGCSLNLHMYTLLIKGL 294
Query: 317 AISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNV 376
G + AR + M P + +Y M+ Y + M+ A ++Q+G P+
Sbjct: 295 CKEGRIHDARGLLDEMPLRGVVPSVWTYNAMIDGYCKSGRMKDALGIKALMEQNGCNPDD 354
Query: 377 ITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKE 436
TY +LI G L++ E+ + G P FT +++ Y K + D A+
Sbjct: 355 WTYNSLIYGLCG-GKLDEAEELLNGAIARGFTPTVITFTNLINGYCKAERIDDALRVKSN 413
Query: 437 MESCGFPPDQKAK----NILLSLAKTADERNEANELLGNFNHPN 476
M S D +A N+L+ + + + NE+ N PN
Sbjct: 414 MISSNCKLDLQAYGVLINVLIKKCRLKEAKETLNEMFANGLAPN 457
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 71/341 (20%), Positives = 145/341 (42%), Gaps = 36/341 (10%)
Query: 70 LKQLKKWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAP 129
L + KK N +L+ + + S N + + ++I+ K+G + A+ + + M G+ P
Sbjct: 640 LCKQKKLNEALSILDQMTV-SGVKCNIVAYTIIISEMIKEGKHDHAKSLFNEMISSGHKP 698
Query: 130 SVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVF 189
S ++T + +Y + G+ + AE + M+ G P +TY I + + F
Sbjct: 699 SATTYTVFISSYCKIGQIEEAEHLIGEMERDGVTPDVVTYHIFIN---GCGHMGYMDRAF 755
Query: 190 MTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFE 249
TL + +P+ + +++ + K +L+ + S + +N + E
Sbjct: 756 STLKRMVDASCEPNCWTYWLLLKHFLK----------MSLINAHYIDTSGM-WNWI---E 801
Query: 250 TNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAY 309
N V ++ ++M + GL P VV+Y+ +I + KA R EEA + + ML + P + Y
Sbjct: 802 LN--TVWQLLERMMKHGLNPTVVTYSSIIAGFCKATRLEEACVLLDHMLGKAISPNEEIY 859
Query: 310 NILLDAFA--------ISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAE 361
+L+ +S + D F+ P + SY ++ + D + A+
Sbjct: 860 TMLIKCCCDIKLFGKDVSFVTDMIEFGFQ--------PQLESYHYLIVGLCDEGDYDRAK 911
Query: 362 KFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKM 402
F L + N + + L G K +++ ++ M
Sbjct: 912 SLFCDLLGMDYNHNEVAWKILNDGLLKAGHVDFCSQLLAAM 952
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 76/296 (25%), Positives = 125/296 (42%), Gaps = 18/296 (6%)
Query: 185 AEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLF-ALMAERGVQQ-----S 238
+ + LL ++P D+ +++ M +G E R+ A+ A R V S
Sbjct: 88 SHAALLQLLARRRAPANYDK----LVLSMISCSGTAEDVREAVDAIQAIRRVGGKRLVLS 143
Query: 239 TVTYN----SLMSFE-TNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAV 293
YN SL+ F+ T Y + K+Y + + GL PD V+Y +I AY K A
Sbjct: 144 PKCYNLALRSLLRFDMTEY--MGKLYSHLVQEGLLPDTVTYNTMIMAYCKKGSLAIAHRY 201
Query: 294 FEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVN 353
F + ++G++ N LL + + + +A + M C + SYT ++
Sbjct: 202 FCLLRESGMQMDTYTCNALLLGYCRTSDLRKACWLLMMMPLMGCRRNEYSYTILIQGLYE 261
Query: 354 ASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTI 413
A + A + QDG N+ Y LIKG K + + D+M + G+ P+
Sbjct: 262 ARCVREALVLVFMMVQDGCSLNLHMYTLLIKGLCKEGRIHDARGLLDEMPLRGVVPSVWT 321
Query: 414 FTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELL 469
+ ++D Y K+ A+ ME G PD N L+ + +EA ELL
Sbjct: 322 YNAMIDGYCKSGRMKDALGIKALMEQNGCNPDDWTYNSLI-YGLCGGKLDEAEELL 376
>gi|224135613|ref|XP_002322117.1| predicted protein [Populus trichocarpa]
gi|222869113|gb|EEF06244.1| predicted protein [Populus trichocarpa]
Length = 854
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 100/393 (25%), Positives = 178/393 (45%), Gaps = 15/393 (3%)
Query: 105 AYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRP 164
AY K GD + ++ M +G +P+VVS + L++ + + GR A +F ++ G P
Sbjct: 386 AYVKIGDLGRVIQIYKRMLNEGISPNVVSCSILIKGFCQNGRILEACGLFVQILKLGFEP 445
Query: 165 SALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKAR 224
S LTY ++ F ++ ++ F D K +PD ++ ++I K G A
Sbjct: 446 SILTYSALIAGFCKSGNLRDG---FYLYEDMIKKRCEPDTIVYSVLINGLCKQGLVGDAL 502
Query: 225 KLFALMAERGVQQSTVTYNSLMSFETNYKEVS---KIYDQMQRAGLQPDVVSYALLINAY 281
+ F RG+ + T N+L+ K + K+Y M ++ D V+Y +LI
Sbjct: 503 RFFFQAVNRGLSPNVFTLNTLLDSFCRLKCIVGAMKVYYLMGMLNIKADTVTYTILIKGA 562
Query: 282 GKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDI 341
+ R +EAL +F +ML +P Y L+D +F M ++ +PDI
Sbjct: 563 AQFGRVDEALMLFFQMLKKDFKPDVITYCTLIDGLCKLKKSSAGLCIFDFMCKNAVAPDI 622
Query: 342 CSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDK 401
Y +++ + +E A F + + G P+V T+ T+I Y L+ ++++ K
Sbjct: 623 AIYNVLINMHSREGHLEAALGLFVHVVERGPKPDVFTFNTMICCYCNFKRLDDAVQLFAK 682
Query: 402 MRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADE 461
M ++PN FT ++DA+ + D A++ + +M G P+ + L+ +
Sbjct: 683 MTSEQLRPNAITFTILIDAFCREGRMDDAMLMFSKMLEEGPEPNLVTYSCLIHGYFKSQS 742
Query: 462 RNEA-----NELLGNFNHPNNEPGINGLSISVD 489
E+ NE+L N N P I SI +D
Sbjct: 743 MMESGLKLYNEMLEN----NIAPNIVSYSILID 771
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 78/314 (24%), Positives = 154/314 (49%), Gaps = 7/314 (2%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
L+ ++ + A KV M V++T L++ + GR A +F +M
Sbjct: 523 LLDSFCRLKCIVGAMKVYYLMGMLNIKADTVTYTILIKGAAQFGRVDEALMLFFQMLKKD 582
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
+P +TY ++ + K +F + K+ + PD +++++I M+ + G E
Sbjct: 583 FKPDVITYCTLIDGLCKLKKSSAGLCIFDFMC---KNAVAPDIAIYNVLINMHSREGHLE 639
Query: 222 KARKLFALMAERGVQQSTVTYNSLMSFETNYKEV---SKIYDQMQRAGLQPDVVSYALLI 278
A LF + ERG + T+N+++ N+K + +++ +M L+P+ +++ +LI
Sbjct: 640 AALGLFVHVVERGPKPDVFTFNTMICCYCNFKRLDDAVQLFAKMTSEQLRPNAITFTILI 699
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDA-FAISGMVDQARTVFKCMRRDRC 337
+A+ + R ++A+ +F +ML+ G P Y+ L+ F M++ ++ M +
Sbjct: 700 DAFCREGRMDDAMLMFSKMLEEGPEPNLVTYSCLIHGYFKSQSMMESGLKLYNEMLENNI 759
Query: 338 SPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMME 397
+P+I SY+ ++ M+ A FR +P+VI Y LI+GY KV L + M
Sbjct: 760 APNIVSYSILIDGLCKRGLMKEASCAFRCALDKHLLPDVIAYTILIRGYCKVGRLTEAMM 819
Query: 398 IYDKMRVNGIKPNQ 411
+YD M +N + P++
Sbjct: 820 LYDNMLLNRLTPDR 833
Score = 115 bits (288), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 80/341 (23%), Positives = 148/341 (43%), Gaps = 43/341 (12%)
Query: 109 QGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALT 168
Q D A+ + + + G P+VV+ + L++AY + G A +F M +G P +
Sbjct: 285 QNDIGVADDYFNMVVRIGPKPNVVTFSTLIDAYCKEGNLDKAFVLFDVMAGNGVTPDLIV 344
Query: 169 YQIIL-KLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLF 227
Y I++ LF KAG E ++L
Sbjct: 345 YSILIDGLF---------------------------------------KAGRLEDGQRLL 365
Query: 228 ALMAERGVQQSTVTYNSLMSFET---NYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKA 284
+ ++G++ V ++S M + V +IY +M G+ P+VVS ++LI + +
Sbjct: 366 LVALDKGIKLDVVGFSSAMDAYVKIGDLGRVIQIYKRMLNEGISPNVVSCSILIKGFCQN 425
Query: 285 RREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSY 344
R EA +F ++L G P+ Y+ L+ F SG + +++ M + RC PD Y
Sbjct: 426 GRILEACGLFVQILKLGFEPSILTYSALIAGFCKSGNLRDGFYLYEDMIKKRCEPDTIVY 485
Query: 345 TTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRV 404
+ +++ + A +FF + G PNV T TL+ + ++ + M++Y M +
Sbjct: 486 SVLINGLCKQGLVGDALRFFFQAVNRGLSPNVFTLNTLLDSFCRLKCIVGAMKVYYLMGM 545
Query: 405 NGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPD 445
IK + +T ++ + D A++ + +M F PD
Sbjct: 546 LNIKADTVTYTILIKGAAQFGRVDEALMLFFQMLKKDFKPD 586
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 63/327 (19%), Positives = 147/327 (44%), Gaps = 8/327 (2%)
Query: 132 VSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMT 191
V + L+E+Y R G + + IF + G S ++L ++++ EV +
Sbjct: 168 VVYGFLIESYCRKGMFDKSVDIFMHVCVKGIFVSPNVVYLLLGSLIDSH----CVEVIVD 223
Query: 192 LLDEEKSPLKPDQ-KMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMS--- 247
E S ++ ++ ++ + G E + + + G +T N ++
Sbjct: 224 KYGELCSAMREQPFSVYEFVMNRFMNKGEVEMGLRFHKALVQGGFGLDIITCNKILKGIW 283
Query: 248 FETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHK 307
+ + ++ + R G +P+VV+++ LI+AY K ++A +F+ M GV P
Sbjct: 284 MQNDIGVADDYFNMVVRIGPKPNVVTFSTLIDAYCKEGNLDKAFVLFDVMAGNGVTPDLI 343
Query: 308 AYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRL 367
Y+IL+D +G ++ + + D+ +++ + AYV D+ + ++R+
Sbjct: 344 VYSILIDGLFKAGRLEDGQRLLLVALDKGIKLDVVGFSSAMDAYVKIGDLGRVIQIYKRM 403
Query: 368 KQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDF 427
+G PNV++ LIKG+ + + + ++ ++ G +P+ ++ ++ + K+ +
Sbjct: 404 LNEGISPNVVSCSILIKGFCQNGRILEACGLFVQILKLGFEPSILTYSALIAGFCKSGNL 463
Query: 428 DSAVVWYKEMESCGFPPDQKAKNILLS 454
Y++M PD ++L++
Sbjct: 464 RDGFYLYEDMIKKRCEPDTIVYSVLIN 490
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/230 (23%), Positives = 113/230 (49%), Gaps = 3/230 (1%)
Query: 227 FALMAERGVQQSTVTYNSLM---SFETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGK 283
F ++ G + + VT+++L+ E N + ++D M G+ PD++ Y++LI+ K
Sbjct: 295 FNMVVRIGPKPNVVTFSTLIDAYCKEGNLDKAFVLFDVMAGNGVTPDLIVYSILIDGLFK 354
Query: 284 ARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICS 343
A R E+ + LD G++ ++ +DA+ G + + ++K M + SP++ S
Sbjct: 355 AGRLEDGQRLLLVALDKGIKLDVVGFSSAMDAYVKIGDLGRVIQIYKRMLNEGISPNVVS 414
Query: 344 YTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMR 403
+ ++ + + A F ++ + GF P+++TY LI G+ K NL +Y+ M
Sbjct: 415 CSILIKGFCQNGRILEACGLFVQILKLGFEPSILTYSALIAGFCKSGNLRDGFYLYEDMI 474
Query: 404 VNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILL 453
+P+ +++ +++ K A+ ++ + + G P+ N LL
Sbjct: 475 KKRCEPDTIVYSVLINGLCKQGLVGDALRFFFQAVNRGLSPNVFTLNTLL 524
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 96/213 (45%), Gaps = 8/213 (3%)
Query: 245 LMSFETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRP 304
+M F +Y + D V Y LI +Y + ++++ +F + G+
Sbjct: 141 IMQFGNDYDTLDAFRDGFCDLDSTNHSVVYGFLIESYCRKGMFDKSVDIFMHVCVKGIFV 200
Query: 305 THKAYNILL----DAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGA 360
+ +LL D+ + +VD+ + MR S Y +++ ++N ++E
Sbjct: 201 SPNVVYLLLGSLIDSHCVEVIVDKYGELCSAMREQPFS----VYEFVMNRFMNKGEVEMG 256
Query: 361 EKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDA 420
+F + L Q GF ++IT ++KG N++ + ++ + G KPN F+T++DA
Sbjct: 257 LRFHKALVQGGFGLDIITCNKILKGIWMQNDIGVADDYFNMVVRIGPKPNVVTFSTLIDA 316
Query: 421 YGKNKDFDSAVVWYKEMESCGFPPDQKAKNILL 453
Y K + D A V + M G PD +IL+
Sbjct: 317 YCKEGNLDKAFVLFDVMAGNGVTPDLIVYSILI 349
>gi|147798989|emb|CAN61637.1| hypothetical protein VITISV_008458 [Vitis vinifera]
Length = 708
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 91/351 (25%), Positives = 169/351 (48%), Gaps = 7/351 (1%)
Query: 85 WLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRG 144
W ++ N ++F LI KQG +A ++L M ++G+ P+V +HT L++ +
Sbjct: 283 WKMVEMGLAPNVINFTALINGLCKQGSIKQAFELLEEMVRRGWKPNVYTHTTLIDGLCKK 342
Query: 145 GRYKNAEAIFRRM-QSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPD 203
G + A +F ++ +S G +P+ TY ++ + + +K AE M L ++ L P+
Sbjct: 343 GWTEKAFRLFLKLVRSDGYKPNVHTYTAMINGYCKEDKLNRAE---MLLSRMQEQGLVPN 399
Query: 204 QKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSL---MSFETNYKEVSKIYD 260
+ +I + K G + +A +L LM + G + TYN++ + + + E ++ +
Sbjct: 400 TNTYTTLIDGHCKVGNFVRAYELMDLMGKEGFSPNIYTYNAIIDGLCKKGSLDEAYRLLN 459
Query: 261 QMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISG 320
++ GLQ D V+Y +L++ + + +L F +ML G P +Y L+ F
Sbjct: 460 KVSVHGLQADGVTYTILMSVHCRQADTNRSLVFFNKMLKVGFTPDIHSYTTLISXFCRQK 519
Query: 321 MVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYG 380
+ ++ +F+ P +YT+M+ Y + A K F+R+ G P+ ITYG
Sbjct: 520 QMKESERLFEEAVSLGLIPTKKTYTSMICGYCRYGNTSLAVKLFQRMSNHGCAPDSITYG 579
Query: 381 TLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAV 431
LI G K + L+ +YD M G+ P + T+ Y K D +A+
Sbjct: 580 ALISGLCKESKLDDARNLYDAMMDKGLSPCEVTRLTLAYEYCKKDDSSTAI 630
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 84/326 (25%), Positives = 155/326 (47%), Gaps = 8/326 (2%)
Query: 81 EVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKV-LSFMNKKGYAPSVVSHTALME 139
E+LE + ++ W N LI K+G KA ++ L + GY P+V ++TA++
Sbjct: 315 ELLEEM-VRRGWKPNVYTHTTLIDGLCKKGWTEKAFRLFLKLVRSDGYKPNVHTYTAMIN 373
Query: 140 AYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSP 199
Y + + AE + RMQ G P+ TY ++ + F A E+ M L+ +E
Sbjct: 374 GYCKEDKLNRAEMLLSRMQEQGLVPNTNTYTTLIDGHCKVGNFVRAYEL-MDLMGKEG-- 430
Query: 200 LKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSK-- 257
P+ ++ +I K G ++A +L ++ G+Q VTY LMS + ++
Sbjct: 431 FSPNIYTYNAIIDGLCKKGSLDEAYRLLNKVSVHGLQADGVTYTILMSVHCRQADTNRSL 490
Query: 258 -IYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAF 316
+++M + G PD+ SY LI+ + + ++ +E+ +FEE + G+ PT K Y ++ +
Sbjct: 491 VFFNKMLKVGFTPDIHSYTTLISXFCRQKQMKESERLFEEAVSLGLIPTKKTYTSMICGY 550
Query: 317 AISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNV 376
G A +F+ M C+PD +Y ++S S ++ A + + G P
Sbjct: 551 CRYGNTSLAVKLFQRMSNHGCAPDSITYGALISGLCKESKLDDARNLYDAMMDKGLSPCE 610
Query: 377 ITYGTLIKGYAKVNNLEKMMEIYDKM 402
+T TL Y K ++ + + D++
Sbjct: 611 VTRLTLAYEYCKKDDSSTAINVLDRL 636
Score = 115 bits (287), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 84/368 (22%), Positives = 154/368 (41%), Gaps = 42/368 (11%)
Query: 141 YGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPL 200
+ G+ K A + MQ+ G S T +L + V + AE +F+ + SP
Sbjct: 164 FAENGKLKEAVNMVVEMQNQGLVXSTQTLNCVLDVAVGMGLVEIAENMFVEMCQRGVSP- 222
Query: 201 KPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSKI-- 258
D F +M+ G +A K M ERG T ++ V+++
Sbjct: 223 --DCVSFKLMVVACCNMGRVLEAEKWLNAMVERGFIVDNATCTLIIDAFCQKGYVNRVVG 280
Query: 259 -YDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFA 317
+ +M GL P+V+++ LIN K ++A + EEM+ G +P + L+D
Sbjct: 281 YFWKMVEMGLAPNVINFTALINGLCKQGSIKQAFELLEEMVRRGWKPNVYTHTTLIDGLC 340
Query: 318 ISGMVDQA-RTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQ------- 369
G ++A R K +R D P++ +YT M++ Y + AE R+++
Sbjct: 341 KKGWTEKAFRLFLKLVRSDGYKPNVHTYTAMINGYCKEDKLNRAEMLLSRMQEQGLVPNT 400
Query: 370 ----------------------------DGFVPNVITYGTLIKGYAKVNNLEKMMEIYDK 401
+GF PN+ TY +I G K +L++ + +K
Sbjct: 401 NTYTTLIDGHCKVGNFVRAYELMDLMGKEGFSPNIYTYNAIIDGLCKKGSLDEAYRLLNK 460
Query: 402 MRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADE 461
+ V+G++ + +T +M + + D + ++V++ +M GF PD + L+S +
Sbjct: 461 VSVHGLQADGVTYTILMSVHCRQADTNRSLVFFNKMLKVGFTPDIHSYTTLISXFCRQKQ 520
Query: 462 RNEANELL 469
E+ L
Sbjct: 521 MKESERLF 528
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 87/376 (23%), Positives = 169/376 (44%), Gaps = 13/376 (3%)
Query: 97 MDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRR 156
+ F +++ A G +AEK L+ M ++G+ + T +++A+ + G F +
Sbjct: 225 VSFKLMVVACCNMGRVLEAEKWLNAMVERGFIVDNATCTLIIDAFCQKGYVNRVVGYFWK 284
Query: 157 MQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEE-KSPLKPDQKMFHMMIYMYK 215
M G P+ + + ++ + K+A E LL+E + KP+ +I
Sbjct: 285 MVEMGLAPNVINFTALINGLCKQGSIKQAFE----LLEEMVRRGWKPNVYTHTTLIDGLC 340
Query: 216 KAGGYEKARKLFA-LMAERGVQQSTVTYNSLM---SFETNYKEVSKIYDQMQRAGLQPDV 271
K G EKA +LF L+ G + + TY +++ E + +MQ GL P+
Sbjct: 341 KKGWTEKAFRLFLKLVRSDGYKPNVHTYTAMINGYCKEDKLNRAEMLLSRMQEQGLVPNT 400
Query: 272 VSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKC 331
+Y LI+ + K A + + M G P YN ++D G +D+A +
Sbjct: 401 NTYTTLIDGHCKVGNFVRAYELMDLMGKEGFSPNIYTYNAIIDGLCKKGSLDEAYRLLNK 460
Query: 332 MRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNN 391
+ D +YT ++S + +D + FF ++ + GF P++ +Y TLI + +
Sbjct: 461 VSVHGLQADGVTYTILMSVHCRQADTNRSLVFFNKMLKVGFTPDIHSYTTLISXFCRQKQ 520
Query: 392 LEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNI 451
+++ ++++ G+ P + +T+++ Y + + AV ++ M + G PD
Sbjct: 521 MKESERLFEEAVSLGLIPTKKTYTSMICGYCRYGNTSLAVKLFQRMSNHGCAPDSITYGA 580
Query: 452 LLS-LAKTA---DERN 463
L+S L K + D RN
Sbjct: 581 LISGLCKESKLDDARN 596
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 77/319 (24%), Positives = 141/319 (44%), Gaps = 14/319 (4%)
Query: 170 QIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFAL 229
Q ++ F E K KEA + +++ + L + + ++ + G E A +F
Sbjct: 158 QCMVMNFAENGKLKEAVNM---VVEMQNQGLVXSTQTLNCVLDVAVGMGLVEIAENMFVE 214
Query: 230 MAERGVQQSTVTYNSLMSFETNYK---EVSKIYDQMQRAGLQPDVVSYALLINAYGKARR 286
M +RGV V++ ++ N E K + M G D + L+I+A+ +
Sbjct: 215 MCQRGVSPDCVSFKLMVVACCNMGRVLEAEKWLNAMVERGFIVDNATCTLIIDAFCQKGY 274
Query: 287 EEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTT 346
+ F +M++ G+ P + L++ G + QA + + M R P++ ++TT
Sbjct: 275 VNRVVGYFWKMVEMGLAPNVINFTALINGLCKQGSIKQAFELLEEMVRRGWKPNVYTHTT 334
Query: 347 MLSAYVNASDMEGAEKFFRRL-KQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVN 405
++ E A + F +L + DG+ PNV TY +I GY K + L + + +M+
Sbjct: 335 LIDGLCKKGWTEKAFRLFLKLVRSDGYKPNVHTYTAMINGYCKEDKLNRAEMLLSRMQEQ 394
Query: 406 GIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEA 465
G+ PN +TT++D + K +F A M GF P+ N ++ +EA
Sbjct: 395 GLVPNTNTYTTLIDGHCKVGNFVRAYELMDLMGKEGFSPNIYTYNAIIDGLCKKGSLDEA 454
Query: 466 NELLGNFNHPNNEPGINGL 484
LL N+ ++GL
Sbjct: 455 YRLL-------NKVSVHGL 466
>gi|410110131|gb|AFV61145.1| pentatricopeptide repeat-containing protein 123, partial [Lippia
rehmannii]
Length = 379
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 97/371 (26%), Positives = 180/371 (48%), Gaps = 37/371 (9%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
LI K D++KA + S + + G+ P +V++ A++ +G+ ++ A ++ M+++G
Sbjct: 11 LIELSRKLCDYSKAIAIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLIGEMKTAG 70
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
P+ +Y +L ++VE KF EA VF + + E K L D ++MI +Y + G +
Sbjct: 71 VMPNTSSYSTLLTMYVENKKFLEALSVF-SEMREIKCLL--DLTTCNIMIDVYGQLGMAK 127
Query: 222 KARKLFALMAERGVQQSTVTYNSLMSFETN---YKEVSKIYDQMQRAGLQPDVVSYALLI 278
+A KLF M + G++ + V+YN+L+ + + E ++ MQR ++ +VV+Y ++
Sbjct: 128 EADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMM 187
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCS 338
YGK E+A + +EM G+ P Y+ ++ + G +D+A +F+ +R
Sbjct: 188 MIYGKTLEHEKANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVE 247
Query: 339 PDICSYTTMLSAY-------------------------------VNASDMEGAEKFFRRL 367
D + TM+ AY A +E A FR+
Sbjct: 248 IDQILFQTMIVAYERAGLVAHAKRLLHELKRPDNIPRDTAIHILAGAGRIEEATYVFRQA 307
Query: 368 KQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDF 427
G V ++ + +I +K ++E++DKMR G P+ + +++AYGK + F
Sbjct: 308 IDAGEVKDITVFERMIHLLSKYKKYANVVEVFDKMRGLGYFPDSNVIAVVLNAYGKLQXF 367
Query: 428 DSAVVWYKEME 438
D A Y EM+
Sbjct: 368 DKANDVYMEMQ 378
Score = 125 bits (315), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 76/280 (27%), Positives = 136/280 (48%), Gaps = 3/280 (1%)
Query: 203 DQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSF---ETNYKEVSKIY 259
D ++ +I + +K Y KA +F+ + G V YN++++ ++E +
Sbjct: 4 DLVLYSNLIELSRKLCDYSKAIAIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLI 63
Query: 260 DQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAIS 319
+M+ AG+ P+ SY+ L+ Y + ++ EAL+VF EM + NI++D +
Sbjct: 64 GEMKTAGVMPNTSSYSTLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQL 123
Query: 320 GMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITY 379
GM +A +F MR+ P++ SY T+L Y +A A FR +++ NV+TY
Sbjct: 124 GMAKEADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTY 183
Query: 380 GTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMES 439
+++ Y K EK + +M+ GI+PN ++TI+ +GK D A + ++++ S
Sbjct: 184 NSMMMIYGKTLEHEKANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRS 243
Query: 440 CGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEP 479
G DQ ++ + A A LL P+N P
Sbjct: 244 SGVEIDQILFQTMIVAYERAGLVAHAKRLLHELKRPDNIP 283
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/240 (23%), Positives = 114/240 (47%), Gaps = 6/240 (2%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + + L+ YG F +A + M +K +VV++ ++M YG+ ++ A +
Sbjct: 144 NVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLI 203
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
+ MQS G P+++TY I+ ++ + K A +F L S ++ DQ +F MI Y
Sbjct: 204 QEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKL---RSSGVEIDQILFQTMIVAY 260
Query: 215 KKAGGYEKARKLFA-LMAERGVQQSTVTYNSLMSFETNYKEVSKIYDQMQRAGLQPDVVS 273
++AG A++L L + + T + +++ +E + ++ Q AG D+
Sbjct: 261 ERAGLVAHAKRLLHELKRPDNIPRDTAIH--ILAGAGRIEEATYVFRQAIDAGEVKDITV 318
Query: 274 YALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMR 333
+ +I+ K ++ + VF++M G P ++L+A+ D+A V+ M+
Sbjct: 319 FERMIHLLSKYKKYANVVEVFDKMRGLGYFPDSNVIAVVLNAYGKLQXFDKANDVYMEMQ 378
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/142 (23%), Positives = 63/142 (44%)
Query: 340 DICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIY 399
D+ Y+ ++ D A F RLK+ GF P+++ Y +I + K + +
Sbjct: 4 DLVLYSNLIELSRKLCDYSKAIAIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLI 63
Query: 400 DKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTA 459
+M+ G+ PN + ++T++ Y +NK F A+ + EM D NI++ +
Sbjct: 64 GEMKTAGVMPNTSSYSTLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQL 123
Query: 460 DERNEANELLGNFNHPNNEPGI 481
EA++L EP +
Sbjct: 124 GMAKEADKLFWGMRKMGIEPNV 145
>gi|242058841|ref|XP_002458566.1| hypothetical protein SORBIDRAFT_03g035845 [Sorghum bicolor]
gi|241930541|gb|EES03686.1| hypothetical protein SORBIDRAFT_03g035845 [Sorghum bicolor]
Length = 796
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 109/462 (23%), Positives = 209/462 (45%), Gaps = 44/462 (9%)
Query: 48 LRSERTRGQPLPKDLVLGTLVR-LKQLKKWNVVSEVLEWLRIQSW-WDFNEMDFLMLITA 105
L+ G+ P + G L+ L + +++ V VL+ +Q + NE+ + +I
Sbjct: 268 LKGRMVEGRVRPSIVTFGILISGLARGQQFGEVGAVLQ--EMQGFGITPNEVIYNEMIGW 325
Query: 106 YGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPS 165
+ ++G ++A K+ M KG +VV++ + +A + G ++AE I M +G
Sbjct: 326 HCRKGHCSEALKLFDEMVSKGIKQTVVTYNLIAKALCKEGEMEHAEKILDEMLLAGMMVH 385
Query: 166 ALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARK 225
+ ++ + + V + + LKP+ + I K+G +E+A +
Sbjct: 386 CSLFNSVVAWHLRGT--GRLDLVLRLIREMLARFLKPNDALMTACIQELCKSGKHEEAAE 443
Query: 226 LFALMAERGVQQSTVTYNSL---MSFETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYG 282
++ + +G+ + T N+L + N KE +K+ M +G++ D ++Y ++I
Sbjct: 444 IWFQVLGKGLGVNVATSNALIHGLCQGNNMKEATKVLKAMVNSGVELDRITYNIMIQGCC 503
Query: 283 KARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDIC 342
KA + +EA+ + ++M+ G +P +NI L + G V++ + M+ + PDI
Sbjct: 504 KASKMDEAIQLRDDMIKRGFKPDLFTFNIFLHTYCNLGKVEEILHLLDQMKSEGLKPDIV 563
Query: 343 SYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKM 402
+Y T++ Y A DM A ++ L ++G PN + Y LI GY + N+ + I D M
Sbjct: 564 TYGTIIDGYCKAKDMHKANEYLTELMKNGLRPNAVIYNALIGGYGRNGNISDAIGILDTM 623
Query: 403 RVNGIKPN-------------------------QTI----------FTTIMDAYGKNKDF 427
+ NGI+P Q I +T I+ + K
Sbjct: 624 KYNGIQPTPVTYNSLMYWMCHAGLVEEVKAVFAQCIVKDIELGVIGYTIIIQGFCKIGKI 683
Query: 428 DSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELL 469
D AV+++KEM S G PP++ L+ + + EA++L
Sbjct: 684 DEAVMYFKEMHSRGIPPNKMTYTTLMFAYSKSGNKEEASKLF 725
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 84/323 (26%), Positives = 161/323 (49%), Gaps = 6/323 (1%)
Query: 135 TALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLD 194
TA ++ + G+++ A I+ ++ G + T ++ + N KEA +V +++
Sbjct: 426 TACIQELCKSGKHEEAAEIWFQVLGKGLGVNVATSNALIHGLCQGNNMKEATKVLKAMVN 485
Query: 195 EEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKE 254
S ++ D+ +++MI KA ++A +L M +RG + T+N + N +
Sbjct: 486 ---SGVELDRITYNIMIQGCCKASKMDEAIQLRDDMIKRGFKPDLFTFNIFLHTYCNLGK 542
Query: 255 VSKIY---DQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNI 311
V +I DQM+ GL+PD+V+Y +I+ Y KA+ +A E++ G+RP YN
Sbjct: 543 VEEILHLLDQMKSEGLKPDIVTYGTIIDGYCKAKDMHKANEYLTELMKNGLRPNAVIYNA 602
Query: 312 LLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDG 371
L+ + +G + A + M+ + P +Y +++ +A +E + F +
Sbjct: 603 LIGGYGRNGNISDAIGILDTMKYNGIQPTPVTYNSLMYWMCHAGLVEEVKAVFAQCIVKD 662
Query: 372 FVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAV 431
VI Y +I+G+ K+ +++ + + +M GI PN+ +TT+M AY K+ + + A
Sbjct: 663 IELGVIGYTIIIQGFCKIGKIDEAVMYFKEMHSRGIPPNKMTYTTLMFAYSKSGNKEEAS 722
Query: 432 VWYKEMESCGFPPDQKAKNILLS 454
+ EM S G PD + N L+S
Sbjct: 723 KLFDEMVSLGIVPDSVSYNTLIS 745
Score = 132 bits (331), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 90/348 (25%), Positives = 167/348 (47%), Gaps = 10/348 (2%)
Query: 98 DFLM--LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFR 155
D LM I K G +A ++ + KG +V + AL+ +G K A + +
Sbjct: 422 DALMTACIQELCKSGKHEEAAEIWFQVLGKGLGVNVATSNALIHGLCQGNNMKEATKVLK 481
Query: 156 RMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYK 215
M +SG +TY I+++ +A+K EA ++ ++ K KPD F++ ++ Y
Sbjct: 482 AMVNSGVELDRITYNIMIQGCCKASKMDEAIQLRDDMI---KRGFKPDLFTFNIFLHTYC 538
Query: 216 KAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSKI---YDQMQRAGLQPDVV 272
G E+ L M G++ VTY +++ K++ K ++ + GL+P+ V
Sbjct: 539 NLGKVEEILHLLDQMKSEGLKPDIVTYGTIIDGYCKAKDMHKANEYLTELMKNGLRPNAV 598
Query: 273 SYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVF-KC 331
Y LI YG+ +A+ + + M G++PT YN L+ +G+V++ + VF +C
Sbjct: 599 IYNALIGGYGRNGNISDAIGILDTMKYNGIQPTPVTYNSLMYWMCHAGLVEEVKAVFAQC 658
Query: 332 MRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNN 391
+ +D + YT ++ + ++ A +F+ + G PN +TY TL+ Y+K N
Sbjct: 659 IVKD-IELGVIGYTIIIQGFCKIGKIDEAVMYFKEMHSRGIPPNKMTYTTLMFAYSKSGN 717
Query: 392 LEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMES 439
E+ +++D+M GI P+ + T++ + + D V EM S
Sbjct: 718 KEEASKLFDEMVSLGIVPDSVSYNTLISGFCEVDSLDKMVESPAEMSS 765
Score = 114 bits (286), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 87/386 (22%), Positives = 175/386 (45%), Gaps = 11/386 (2%)
Query: 99 FLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQ 158
+ +I A + G+ + A +L+ + + G P+VV++ LM+A + GR + A + RM
Sbjct: 214 YTAMIKALCRAGEIDAAFAMLAELRRSGIQPTVVTYNVLMDALCKSGRVEEAFRLKGRMV 273
Query: 159 SSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAG 218
RPS +T+ I++ +F E V L + + + P++ +++ MI + + G
Sbjct: 274 EGRVRPSIVTFGILISGLARGQQFGEVGAV---LQEMQGFGITPNEVIYNEMIGWHCRKG 330
Query: 219 GYEKARKLFALMAERGVQQSTVTYNSL---MSFETNYKEVSKIYDQMQRAGLQPDVVSYA 275
+A KLF M +G++Q+ VTYN + + E + KI D+M AG+ +
Sbjct: 331 HCSEALKLFDEMVSKGIKQTVVTYNLIAKALCKEGEMEHAEKILDEMLLAGMMVHCSLFN 390
Query: 276 LLINAYGKAR-REEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRR 334
++ + + R + L + EML ++P + SG ++A ++ +
Sbjct: 391 SVVAWHLRGTGRLDLVLRLIREMLARFLKPNDALMTACIQELCKSGKHEEAAEIWFQVLG 450
Query: 335 DRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEK 394
++ + ++ ++M+ A K + + G + ITY +I+G K + +++
Sbjct: 451 KGLGVNVATSNALIHGLCQGNNMKEATKVLKAMVNSGVELDRITYNIMIQGCCKASKMDE 510
Query: 395 MMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLS 454
+++ D M G KP+ F + Y + + +M+S G PD ++
Sbjct: 511 AIQLRDDMIKRGFKPDLFTFNIFLHTYCNLGKVEEILHLLDQMKSEGLKPDIVTYGTIID 570
Query: 455 LAKTADERNEAN----ELLGNFNHPN 476
A + ++AN EL+ N PN
Sbjct: 571 GYCKAKDMHKANEYLTELMKNGLRPN 596
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 88/387 (22%), Positives = 172/387 (44%), Gaps = 10/387 (2%)
Query: 101 MLITAYGKQGDFNKAEKVLSFM-NKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQS 159
+L+ A G G + A KV M + K AP V ++TA+++A R G A A+ ++
Sbjct: 180 ILVEALGCGGQLDVARKVFGEMRDGKTVAPDVHTYTAMIKALCRAGEIDAAFAMLAELRR 239
Query: 160 SGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGG 219
SG +P+ +TY +++ ++ + +EA + +++ ++P F ++I +
Sbjct: 240 SGIQPTVVTYNVLMDALCKSGRVEEAFRLKGRMVEGR---VRPSIVTFGILISGLARGQQ 296
Query: 220 YEKARKLFALMAERGVQQSTVTYNSLMSFET---NYKEVSKIYDQMQRAGLQPDVVSYAL 276
+ + + M G+ + V YN ++ + + E K++D+M G++ VV+Y L
Sbjct: 297 FGEVGAVLQEMQGFGITPNEVIYNEMIGWHCRKGHCSEALKLFDEMVSKGIKQTVVTYNL 356
Query: 277 LINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAI--SGMVDQARTVFKCMRR 334
+ A K E A + +EML AG+ +N ++ A+ + +G +D + + M
Sbjct: 357 IAKALCKEGEMEHAEKILDEMLLAGMMVHCSLFNSVV-AWHLRGTGRLDLVLRLIREMLA 415
Query: 335 DRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEK 394
P+ T + + E A + + ++ G NV T LI G + NN+++
Sbjct: 416 RFLKPNDALMTACIQELCKSGKHEEAAEIWFQVLGKGLGVNVATSNALIHGLCQGNNMKE 475
Query: 395 MMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLS 454
++ M +G++ ++ + ++ K D A+ +M GF PD NI L
Sbjct: 476 ATKVLKAMVNSGVELDRITYNIMIQGCCKASKMDEAIQLRDDMIKRGFKPDLFTFNIFLH 535
Query: 455 LAKTADERNEANELLGNFNHPNNEPGI 481
+ E LL +P I
Sbjct: 536 TYCNLGKVEEILHLLDQMKSEGLKPDI 562
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/274 (23%), Positives = 115/274 (41%), Gaps = 34/274 (12%)
Query: 145 GRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQ 204
G A F + + G PS T I+++ + A +VF + D + + PD
Sbjct: 154 GSLSRAADAFLELSARGASPSIKTCSILVEALGCGGQLDVARKVFGEMRDGKT--VAPDV 211
Query: 205 KMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSKIYDQMQR 264
+ MI +AG + A FA++AE ++R
Sbjct: 212 HTYTAMIKALCRAGEIDAA---FAMLAE-----------------------------LRR 239
Query: 265 AGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQ 324
+G+QP VV+Y +L++A K+ R EEA + M++ VRP+ + IL+ A +
Sbjct: 240 SGIQPTVVTYNVLMDALCKSGRVEEAFRLKGRMVEGRVRPSIVTFGILISGLARGQQFGE 299
Query: 325 ARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIK 384
V + M+ +P+ Y M+ + A K F + G V+TY + K
Sbjct: 300 VGAVLQEMQGFGITPNEVIYNEMIGWHCRKGHCSEALKLFDEMVSKGIKQTVVTYNLIAK 359
Query: 385 GYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIM 418
K +E +I D+M + G+ + ++F +++
Sbjct: 360 ALCKEGEMEHAEKILDEMLLAGMMVHCSLFNSVV 393
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 53/224 (23%), Positives = 98/224 (43%), Gaps = 4/224 (1%)
Query: 218 GGYEKARKLFALMAERGVQQSTVTYNSL---MSFETNYKEVSKIYDQMQRA-GLQPDVVS 273
G +A F ++ RG S T + L + K++ +M+ + PDV +
Sbjct: 154 GSLSRAADAFLELSARGASPSIKTCSILVEALGCGGQLDVARKVFGEMRDGKTVAPDVHT 213
Query: 274 YALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMR 333
Y +I A +A + A A+ E+ +G++PT YN+L+DA SG V++A + M
Sbjct: 214 YTAMIKALCRAGEIDAAFAMLAELRRSGIQPTVVTYNVLMDALCKSGRVEEAFRLKGRMV 273
Query: 334 RDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLE 393
R P I ++ ++S + ++ G PN + Y +I + + +
Sbjct: 274 EGRVRPSIVTFGILISGLARGQQFGEVGAVLQEMQGFGITPNEVIYNEMIGWHCRKGHCS 333
Query: 394 KMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEM 437
+ ++++D+M GIK + I A K + + A EM
Sbjct: 334 EALKLFDEMVSKGIKQTVVTYNLIAKALCKEGEMEHAEKILDEM 377
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 48/212 (22%), Positives = 95/212 (44%), Gaps = 1/212 (0%)
Query: 259 YDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDA-GVRPTHKAYNILLDAFA 317
+ ++ G P + + ++L+ A G + + A VF EM D V P Y ++ A
Sbjct: 163 FLELSARGASPSIKTCSILVEALGCGGQLDVARKVFGEMRDGKTVAPDVHTYTAMIKALC 222
Query: 318 ISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVI 377
+G +D A + +RR P + +Y ++ A + +E A + R+ + P+++
Sbjct: 223 RAGEIDAAFAMLAELRRSGIQPTVVTYNVLMDALCKSGRVEEAFRLKGRMVEGRVRPSIV 282
Query: 378 TYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEM 437
T+G LI G A+ ++ + +M+ GI PN+ I+ ++ + + A+ + EM
Sbjct: 283 TFGILISGLARGQQFGEVGAVLQEMQGFGITPNEVIYNEMIGWHCRKGHCSEALKLFDEM 342
Query: 438 ESCGFPPDQKAKNILLSLAKTADERNEANELL 469
S G N++ E A ++L
Sbjct: 343 VSKGIKQTVVTYNLIAKALCKEGEMEHAEKIL 374
>gi|357139229|ref|XP_003571186.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g16010-like [Brachypodium distachyon]
Length = 628
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 107/445 (24%), Positives = 198/445 (44%), Gaps = 7/445 (1%)
Query: 33 RLMNQIEEVGSAVAVLRSERTRGQPLPKDLVLGTLVRLKQLKKWNVVSEVLEWLRIQSWW 92
R++ + + AVA+ + R ++ L ++ V E+ + +
Sbjct: 163 RMLGNAKMISKAVAIFYQIKVRKCQPTAQAYNSMIIMLMHEGQYEKVHELYNEMSNEGHC 222
Query: 93 DFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEA 152
+ + + LI+A+ K G + A ++L+ M G P+ +T L+ + + A
Sbjct: 223 FPDTVTYSALISAFCKLGRQDSAIRLLNEMKDNGMQPTAKIYTMLIALFFKLNNVHGALG 282
Query: 153 IFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIY 212
+F M+ RP TY +++ +A +F EA F + + +PD + + MI
Sbjct: 283 LFEEMRHQYCRPDVFTYTELIRGLGKAGRFDEAYNFFHEM---RREGCRPDTVVINNMIN 339
Query: 213 MYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMS--FETNYK--EVSKIYDQMQRAGLQ 268
KAG + A KLF M S VTYN+++ FE+ + E+S +++M+ +G+
Sbjct: 340 FLGKAGRLDDAVKLFEEMGTLQCIPSVVTYNTIIKALFESKSRISEISSWFERMKGSGIS 399
Query: 269 PDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTV 328
P +Y++LI+ + K R E+A+ + EEM + G P AY L+DA + D A +
Sbjct: 400 PSPFTYSILIDGFCKTNRTEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDIAHEL 459
Query: 329 FKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAK 388
F+ ++ + S Y M+ A ++ A F + + G PNV Y L+ G A+
Sbjct: 460 FQELKENCGSSSARVYAVMIKHLGKAGRLDDAVNLFDEMNKLGCTPNVYAYNALMSGLAR 519
Query: 389 VNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKA 448
L++ + +M+ +G P+ + I++ K A+ M+ PD +
Sbjct: 520 AGMLDEALTTMRRMQEHGCIPDINSYNIILNGLAKTGGPHRAMEMLSNMKQSAIKPDAVS 579
Query: 449 KNILLSLAKTADERNEANELLGNFN 473
N +L A EA +L+ N
Sbjct: 580 YNTVLGAMSHAGLFEEAAKLMKEMN 604
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 96/384 (25%), Positives = 184/384 (47%), Gaps = 10/384 (2%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYA-PSVVSHTALMEAYGRGGRYKNAEAIFRRMQSS 160
+I +G + K ++ + M+ +G+ P V+++AL+ A+ + GR +A + M+ +
Sbjct: 196 MIIMLMHEGQYEKVHELYNEMSNEGHCFPDTVTYSALISAFCKLGRQDSAIRLLNEMKDN 255
Query: 161 GPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGY 220
G +P+A Y +++ LF + N A +F + + +PD + +I KAG +
Sbjct: 256 GMQPTAKIYTMLIALFFKLNNVHGALGLFEEMRHQY---CRPDVFTYTELIRGLGKAGRF 312
Query: 221 EKARKLFALMAERGVQQSTVTYNSLMSF---ETNYKEVSKIYDQMQRAGLQPDVVSYALL 277
++A F M G + TV N++++F + K++++M P VV+Y +
Sbjct: 313 DEAYNFFHEMRREGCRPDTVVINNMINFLGKAGRLDDAVKLFEEMGTLQCIPSVVTYNTI 372
Query: 278 INAYGKAR-REEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDR 336
I A +++ R E + FE M +G+ P+ Y+IL+D F + ++A + + M
Sbjct: 373 IKALFESKSRISEISSWFERMKGSGISPSPFTYSILIDGFCKTNRTEKAMMLLEEMDEKG 432
Query: 337 CSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMM 396
P +Y +++ A A + A + F+ LK++ + Y +IK K L+ +
Sbjct: 433 FPPCPAAYCSLIDALGKAKRYDIAHELFQELKENCGSSSARVYAVMIKHLGKAGRLDDAV 492
Query: 397 EIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLS-L 455
++D+M G PN + +M + D A+ + M+ G PD + NI+L+ L
Sbjct: 493 NLFDEMNKLGCTPNVYAYNALMSGLARAGMLDEALTTMRRMQEHGCIPDINSYNIILNGL 552
Query: 456 AKTADERNEANELLGNFNHPNNEP 479
AKT + A E+L N +P
Sbjct: 553 AKTGGP-HRAMEMLSNMKQSAIKP 575
Score = 131 bits (330), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 83/310 (26%), Positives = 151/310 (48%), Gaps = 7/310 (2%)
Query: 137 LMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEE 196
++ G A AIF +++ +P+A Y ++ + + ++++ E++ + +E
Sbjct: 161 IIRMLGNAKMISKAVAIFYQIKVRKCQPTAQAYNSMIIMLMHEGQYEKVHELYNEMSNEG 220
Query: 197 KSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSF---ETNYK 253
PD + +I + K G + A +L M + G+Q + Y L++ N
Sbjct: 221 HC--FPDTVTYSALISAFCKLGRQDSAIRLLNEMKDNGMQPTAKIYTMLIALFFKLNNVH 278
Query: 254 EVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILL 313
++++M+ +PDV +Y LI GKA R +EA F EM G RP N ++
Sbjct: 279 GALGLFEEMRHQYCRPDVFTYTELIRGLGKAGRFDEAYNFFHEMRREGCRPDTVVINNMI 338
Query: 314 DAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSA-YVNASDMEGAEKFFRRLKQDGF 372
+ +G +D A +F+ M +C P + +Y T++ A + + S + +F R+K G
Sbjct: 339 NFLGKAGRLDDAVKLFEEMGTLQCIPSVVTYNTIIKALFESKSRISEISSWFERMKGSGI 398
Query: 373 VPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVV 432
P+ TY LI G+ K N EK M + ++M G P + +++DA GK K +D A
Sbjct: 399 SPSPFTYSILIDGFCKTNRTEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDIAHE 458
Query: 433 WYKEM-ESCG 441
++E+ E+CG
Sbjct: 459 LFQELKENCG 468
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 87/326 (26%), Positives = 150/326 (46%), Gaps = 7/326 (2%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
LI GK G F++A M ++G P V ++ G+ GR +A +F M +
Sbjct: 302 LIRGLGKAGRFDEAYNFFHEMRREGCRPDTVVINNMINFLGKAGRLDDAVKLFEEMGTLQ 361
Query: 162 PRPSALTYQIILK-LFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGY 220
PS +TY I+K LF ++ E F + + S + P + ++I + K
Sbjct: 362 CIPSVVTYNTIIKALFESKSRISEISSWFERM---KGSGISPSPFTYSILIDGFCKTNRT 418
Query: 221 EKARKLFALMAERGVQQSTVTYNSL---MSFETNYKEVSKIYDQMQRAGLQPDVVSYALL 277
EKA L M E+G Y SL + Y +++ +++ YA++
Sbjct: 419 EKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDIAHELFQELKENCGSSSARVYAVM 478
Query: 278 INAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRC 337
I GKA R ++A+ +F+EM G P AYN L+ A +GM+D+A T + M+ C
Sbjct: 479 IKHLGKAGRLDDAVNLFDEMNKLGCTPNVYAYNALMSGLARAGMLDEALTTMRRMQEHGC 538
Query: 338 SPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMME 397
PDI SY +L+ A + +KQ P+ ++Y T++ + E+ +
Sbjct: 539 IPDINSYNIILNGLAKTGGPHRAMEMLSNMKQSAIKPDAVSYNTVLGAMSHAGLFEEAAK 598
Query: 398 IYDKMRVNGIKPNQTIFTTIMDAYGK 423
+ +M V G + + +++I++A GK
Sbjct: 599 LMKEMNVLGFEYDLITYSSILEAIGK 624
Score = 115 bits (289), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 81/295 (27%), Positives = 140/295 (47%), Gaps = 9/295 (3%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEA-YGRGGRYKNAEAIFRRMQSS 160
+I GK G + A K+ M PSVV++ +++A + R + F RM+ S
Sbjct: 337 MINFLGKAGRLDDAVKLFEEMGTLQCIPSVVTYNTIIKALFESKSRISEISSWFERMKGS 396
Query: 161 GPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDE-EKSPLKPDQKMFHMMIYMYKKAGG 219
G PS TY I++ F + N+ ++A M LL+E ++ P + +I KA
Sbjct: 397 GISPSPFTYSILIDGFCKTNRTEKA----MMLLEEMDEKGFPPCPAAYCSLIDALGKAKR 452
Query: 220 YEKARKLFALMAERGVQQSTVTYNSLMSF---ETNYKEVSKIYDQMQRAGLQPDVVSYAL 276
Y+ A +LF + E S Y ++ + ++D+M + G P+V +Y
Sbjct: 453 YDIAHELFQELKENCGSSSARVYAVMIKHLGKAGRLDDAVNLFDEMNKLGCTPNVYAYNA 512
Query: 277 LINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDR 336
L++ +A +EAL M + G P +YNI+L+ A +G +A + M++
Sbjct: 513 LMSGLARAGMLDEALTTMRRMQEHGCIPDINSYNIILNGLAKTGGPHRAMEMLSNMKQSA 572
Query: 337 CSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNN 391
PD SY T+L A +A E A K + + GF ++ITY ++++ KV++
Sbjct: 573 IKPDAVSYNTVLGAMSHAGLFEEAAKLMKEMNVLGFEYDLITYSSILEAIGKVDH 627
Score = 75.1 bits (183), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 60/269 (22%), Positives = 125/269 (46%), Gaps = 38/269 (14%)
Query: 56 QPLPKDLVLGTLVRLKQLKKWNVVSEVLEWL-RIQ-SWWDFNEMDFLMLITAYGKQGDFN 113
Q +P + T+++ + + +SE+ W R++ S + + +LI + K
Sbjct: 361 QCIPSVVTYNTIIK-ALFESKSRISEISSWFERMKGSGISPSPFTYSILIDGFCKTNRTE 419
Query: 114 KAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIIL 173
KA +L M++KG+ P ++ +L++A G+ RY A +F+ ++ + SA Y +++
Sbjct: 420 KAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDIAHELFQELKENCGSSSARVYAVMI 479
Query: 174 K-------------LFVEANKFKEAEEVFMT-----------LLDEEKSPLK-------- 201
K LF E NK V+ +LDE + ++
Sbjct: 480 KHLGKAGRLDDAVNLFDEMNKLGCTPNVYAYNALMSGLARAGMLDEALTTMRRMQEHGCI 539
Query: 202 PDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSL---MSFETNYKEVSKI 258
PD +++++ K GG +A ++ + M + ++ V+YN++ MS ++E +K+
Sbjct: 540 PDINSYNIILNGLAKTGGPHRAMEMLSNMKQSAIKPDAVSYNTVLGAMSHAGLFEEAAKL 599
Query: 259 YDQMQRAGLQPDVVSYALLINAYGKARRE 287
+M G + D+++Y+ ++ A GK E
Sbjct: 600 MKEMNVLGFEYDLITYSSILEAIGKVDHE 628
>gi|224713520|gb|ACN62067.1| PPR-816 [Zea mays]
Length = 816
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 91/358 (25%), Positives = 171/358 (47%), Gaps = 8/358 (2%)
Query: 101 MLITAYGKQGDFNKAEKVLSFMNKKG--YAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQ 158
+L+ + QG +A+ +L M + G +P VV++ +++ + + G A +F+ M
Sbjct: 189 ILLKSLCNQGKSGQADDLLRMMAEGGTVCSPDVVAYNTVIDGFFKEGDVNKACDLFKEMV 248
Query: 159 SSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAG 218
G P +TY ++ +A +AE ++++ + PD ++ +IY Y G
Sbjct: 249 QRGIPPDLVTYSSVVHALCKARAMDKAEAFLRQMVNKG---VLPDNWTYNNLIYGYSSTG 305
Query: 219 GYEKARKLFALMAERGVQQSTVTYNSLMSFETNY---KEVSKIYDQMQRAGLQPDVVSYA 275
+++A ++F M + + V N+LM Y KE ++D M G PDV SY
Sbjct: 306 QWKEAVRVFKEMRRQSILPDVVALNTLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYT 365
Query: 276 LLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRD 335
+++N Y + +F+ ML G+ P +N+L+ A+A GM+D+A +F MR
Sbjct: 366 IMLNGYATKGCLVDMTDLFDLMLGDGIAPVICTFNVLIKAYANCGMLDKAMIIFNEMRDH 425
Query: 336 RCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKM 395
P + +Y T+++A M+ A + F ++ G VP+ Y LI+G+ +L K
Sbjct: 426 GVKPHVVTYMTVIAALCRIGKMDDAMEKFNQMIDQGVVPDKYAYHCLIQGFCTHGSLLKA 485
Query: 396 MEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILL 453
E+ ++ NG++ + F +I++ K A + + G PD N+L+
Sbjct: 486 KELISEIMNNGMRLDIVFFGSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLM 543
Score = 141 bits (356), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 100/364 (27%), Positives = 169/364 (46%), Gaps = 8/364 (2%)
Query: 113 NKAEKVLSFMN---KKGYAPSVVSHTALMEAYGRGGRYKNA-EAIFRRMQSSGPRPSALT 168
++ E L+F + G + + L++ + R A + + R G P +
Sbjct: 127 HRPELALAFFGQLLRTGLRVDAIIASHLLKGFCEAKRTDEALDILLHRTPELGCVPDVFS 186
Query: 169 YQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFA 228
Y I+LK K +A+++ + ++ E + PD ++ +I + K G KA LF
Sbjct: 187 YNILLKSLCNQGKSGQADDL-LRMMAEGGTVCSPDVVAYNTVIDGFFKEGDVNKACDLFK 245
Query: 229 LMAERGVQQSTVTYNSLMSFETNYKEVSK---IYDQMQRAGLQPDVVSYALLINAYGKAR 285
M +RG+ VTY+S++ + + K QM G+ PD +Y LI Y
Sbjct: 246 EMVQRGIPPDLVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPDNWTYNNLIYGYSSTG 305
Query: 286 REEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYT 345
+ +EA+ VF+EM + P A N L+ + G + +AR VF M +PD+ SYT
Sbjct: 306 QWKEAVRVFKEMRRQSILPDVVALNTLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYT 365
Query: 346 TMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVN 405
ML+ Y + F + DG P + T+ LIK YA L+K M I+++MR +
Sbjct: 366 IMLNGYATKGCLVDMTDLFDLMLGDGIAPVICTFNVLIKAYANCGMLDKAMIIFNEMRDH 425
Query: 406 GIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEA 465
G+KP+ + T++ A + D A+ + +M G PD+ A + L+ T +A
Sbjct: 426 GVKPHVVTYMTVIAALCRIGKMDDAMEKFNQMIDQGVVPDKYAYHCLIQGFCTHGSLLKA 485
Query: 466 NELL 469
EL+
Sbjct: 486 KELI 489
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 103/447 (23%), Positives = 185/447 (41%), Gaps = 46/447 (10%)
Query: 44 AVAVLRSERTRGQPLPKDLVLGTLVRLKQLKKWNVVSEVLEWLRIQSWWDFNE--MDFLM 101
AV V + R R LP + L TL + L K+ + E + + N + +
Sbjct: 310 AVRVFKEMR-RQSILPDVVALNTL--MGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYTI 366
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
++ Y +G + M G AP + + L++AY G A IF M+ G
Sbjct: 367 MLNGYATKGCLVDMTDLFDLMLGDGIAPVICTFNVLIKAYANCGMLDKAMIIFNEMRDHG 426
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
+P +TY ++ K +A E F ++D+ + PD+ +H +I + G
Sbjct: 427 VKPHVVTYMTVIAALCRIGKMDDAMEKFNQMIDQG---VVPDKYAYHCLIQGFCTHGSLL 483
Query: 222 KARKL-----------------------------------FALMAERGVQQSTVTYNSLM 246
KA++L F L G+ V YN LM
Sbjct: 484 KAKELISEIMNNGMRLDIVFFGSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLM 543
Query: 247 ---SFETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVR 303
++ +++D M AG++P+VV Y L+N Y K R +E L++F EML G++
Sbjct: 544 DGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQKGIK 603
Query: 304 PTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKF 363
P+ YNI++D +G A+ F M + + C+Y+ +L + A
Sbjct: 604 PSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYSIVLRGLFKNRCFDEAIFL 663
Query: 364 FRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGK 423
F+ L+ ++IT T+I G + +E+ +++ + +G+ P ++ ++ K
Sbjct: 664 FKELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDLFASISRSGLVPCAVTYSIMITNLIK 723
Query: 424 NKDFDSAVVWYKEMESCGFPPDQKAKN 450
+ A + M++ G PD + N
Sbjct: 724 EGLVEEAEDMFSSMQNAGCEPDSRLLN 750
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/232 (26%), Positives = 109/232 (46%), Gaps = 7/232 (3%)
Query: 233 RGVQQSTVTYNSLMSFET--NYKEVS-KIYDQMQRAGLQPDVVSYALLINAYGKARREEE 289
R + ++ TY LM T + E++ + Q+ R GL+ D + + L+ + +A+R +E
Sbjct: 107 RVLSPTSYTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDAIIASHLLKGFCEAKRTDE 166
Query: 290 ALAVF-EEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRR--DRCSPDICSYTT 346
AL + + G P +YNILL + G QA + + M CSPD+ +Y T
Sbjct: 167 ALDILLHRTPELGCVPDVFSYNILLKSLCNQGKSGQADDLLRMMAEGGTVCSPDVVAYNT 226
Query: 347 MLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNG 406
++ + D+ A F+ + Q G P+++TY +++ K ++K +M G
Sbjct: 227 VIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMDKAEAFLRQMVNKG 286
Query: 407 IKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILL-SLAK 457
+ P+ + ++ Y + AV +KEM PD A N L+ SL K
Sbjct: 287 VLPDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVALNTLMGSLCK 338
>gi|297797589|ref|XP_002866679.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297312514|gb|EFH42938.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 915
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 97/366 (26%), Positives = 180/366 (49%), Gaps = 10/366 (2%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + +LI + Q KA ++L M +KG P+V+++ AL+ Y + G ++A +
Sbjct: 357 NIHTYTVLIDSLCSQCKLEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDALDVV 416
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
M+S RP+ TY ++K + + N K A V +L+ + + PD ++ +I
Sbjct: 417 ELMESRNLRPNTRTYNELIKGYCKRNVHK-AMGVLNKMLERK---VLPDVVTYNSLIDGQ 472
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSK---IYDQMQRAGLQPDV 271
++G ++ A +L +LM +RG+ TY S++ K V + ++D +++ + P+V
Sbjct: 473 CRSGNFDSAYRLLSLMNDRGLVPDPWTYTSMIDSLCKSKRVEEACDLFDSLEQKDVIPNV 532
Query: 272 VSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKC 331
V Y LI+ Y KA + EA + E+ML P +N L+ G + +A + +
Sbjct: 533 VMYTALIDGYCKAGKVNEAHLMLEKMLSKNCLPNSLTFNALIHGLCTDGKLKEATLLEEK 592
Query: 332 MRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNN 391
M + P + + T ++ + D + A + F+++ G P+ TY T I+ Y +
Sbjct: 593 MVKIDLQPTVSTDTILIHRLLKDGDFDHAYRRFQQMLSSGTKPDAHTYTTFIQTYCREGR 652
Query: 392 LEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNI 451
L+ ++ KM+ NG+ P+ +++++ YG +SA V K M G P Q +
Sbjct: 653 LQDAEDMVAKMKENGVSPDLFTYSSLIKGYGDLGRTNSAFVVLKRMHDTGCEPSQ---HT 709
Query: 452 LLSLAK 457
LSL K
Sbjct: 710 FLSLIK 715
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 97/425 (22%), Positives = 191/425 (44%), Gaps = 12/425 (2%)
Query: 78 VVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTAL 137
V E+LE + + +N+M + Y K G+ +A + +S + + G P ++T+L
Sbjct: 205 VYMEMLEDKVCPNIYTYNKM-----VNGYCKVGNVEEANQYVSMIVEAGLDPDFFTYTSL 259
Query: 138 MEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEK 197
+ Y + +A +F+ M G R + + Y ++ + EA ++F+ + D++
Sbjct: 260 IMGYCQRKDLDSAFKVFKEMPLKGCRRNEVAYTHLIHGLCVERRIDEAMDLFVKMKDDD- 318
Query: 198 SPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSL---MSFETNYKE 254
P + + ++I + +A L M E+G++ + TY L + + ++
Sbjct: 319 --CYPTVRTYTVLIKALCGSERKSEALNLVKEMEEKGIKPNIHTYTVLIDSLCSQCKLEK 376
Query: 255 VSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLD 314
++ QM GL P+V++Y LIN Y K E+AL V E M +RP + YN L+
Sbjct: 377 ARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDALDVVELMESRNLRPNTRTYNELIK 436
Query: 315 AFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVP 374
+ V +A V M + PD+ +Y +++ + + + A + + G VP
Sbjct: 437 GYCKRN-VHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVP 495
Query: 375 NVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWY 434
+ TY ++I K +E+ +++D + + PN ++T ++D Y K + A +
Sbjct: 496 DPWTYTSMIDSLCKSKRVEEACDLFDSLEQKDVIPNVVMYTALIDGYCKAGKVNEAHLML 555
Query: 435 KEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGINGLSISVDEEDDD 494
++M S P+ N L+ T + EA L + +P ++ +I + D
Sbjct: 556 EKMLSKNCLPNSLTFNALIHGLCTDGKLKEATLLEEKMVKIDLQPTVSTDTILIHRLLKD 615
Query: 495 DDDDE 499
D D
Sbjct: 616 GDFDH 620
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 71/279 (25%), Positives = 133/279 (47%), Gaps = 6/279 (2%)
Query: 168 TYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLF 227
Y +L E ++V+M +L+++ + P+ ++ M+ Y K G E+A +
Sbjct: 185 CYNTLLNSLARFGLVDEMKQVYMEMLEDK---VCPNIYTYNKMVNGYCKVGNVEEANQYV 241
Query: 228 ALMAERGVQQSTVTYNSLMSFETNYKEVS---KIYDQMQRAGLQPDVVSYALLINAYGKA 284
+++ E G+ TY SL+ K++ K++ +M G + + V+Y LI+
Sbjct: 242 SMIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFKEMPLKGCRRNEVAYTHLIHGLCVE 301
Query: 285 RREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSY 344
RR +EA+ +F +M D PT + Y +L+ A S +A + K M P+I +Y
Sbjct: 302 RRIDEAMDLFVKMKDDDCYPTVRTYTVLIKALCGSERKSEALNLVKEMEEKGIKPNIHTY 361
Query: 345 TTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRV 404
T ++ + + +E A + ++ + G +PNVITY LI GY K +E +++ + M
Sbjct: 362 TVLIDSLCSQCKLEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDALDVVELMES 421
Query: 405 NGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFP 443
++PN + ++ Y K + V K +E P
Sbjct: 422 RNLRPNTRTYNELIKGYCKRNVHKAMGVLNKMLERKVLP 460
Score = 108 bits (271), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 80/350 (22%), Positives = 158/350 (45%), Gaps = 7/350 (2%)
Query: 99 FLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQ 158
+ +LI A ++A ++ M +KG P++ ++T L+++ + + A + +M
Sbjct: 326 YTVLIKALCGSERKSEALNLVKEMEEKGIKPNIHTYTVLIDSLCSQCKLEKARELLGQML 385
Query: 159 SSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAG 218
G P+ +TY ++ + + ++A +V + E L+P+ + ++ +I Y K
Sbjct: 386 EKGLMPNVITYNALINGYCKRGMIEDALDVVELM---ESRNLRPNTRTYNELIKGYCKRN 442
Query: 219 GYEKARKLFALMAERGVQQSTVTYNSLMSFET---NYKEVSKIYDQMQRAGLQPDVVSYA 275
+ KA + M ER V VTYNSL+ + N+ ++ M GL PD +Y
Sbjct: 443 VH-KAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDPWTYT 501
Query: 276 LLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRD 335
+I++ K++R EEA +F+ + V P Y L+D + +G V++A + + M
Sbjct: 502 SMIDSLCKSKRVEEACDLFDSLEQKDVIPNVVMYTALIDGYCKAGKVNEAHLMLEKMLSK 561
Query: 336 RCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKM 395
C P+ ++ ++ ++ A ++ + P V T LI K + +
Sbjct: 562 NCLPNSLTFNALIHGLCTDGKLKEATLLEEKMVKIDLQPTVSTDTILIHRLLKDGDFDHA 621
Query: 396 MEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPD 445
+ +M +G KP+ +TT + Y + A +M+ G PD
Sbjct: 622 YRRFQQMLSSGTKPDAHTYTTFIQTYCREGRLQDAEDMVAKMKENGVSPD 671
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 63/239 (26%), Positives = 111/239 (46%), Gaps = 3/239 (1%)
Query: 218 GGYEKARKLFALMAERGVQQSTVTYNSLMSFET---NYKEVSKIYDQMQRAGLQPDVVSY 274
G ++ ++++ M E V + TYN +++ N +E ++ + AGL PD +Y
Sbjct: 197 GLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKVGNVEEANQYVSMIVEAGLDPDFFTY 256
Query: 275 ALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRR 334
LI Y + + + A VF+EM G R AY L+ + +D+A +F M+
Sbjct: 257 TSLIMGYCQRKDLDSAFKVFKEMPLKGCRRNEVAYTHLIHGLCVERRIDEAMDLFVKMKD 316
Query: 335 DRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEK 394
D C P + +YT ++ A + A + +++ G PN+ TY LI LEK
Sbjct: 317 DDCYPTVRTYTVLIKALCGSERKSEALNLVKEMEEKGIKPNIHTYTVLIDSLCSQCKLEK 376
Query: 395 MMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILL 453
E+ +M G+ PN + +++ Y K + A+ + MES P+ + N L+
Sbjct: 377 ARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDALDVVELMESRNLRPNTRTYNELI 435
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/269 (23%), Positives = 128/269 (47%), Gaps = 19/269 (7%)
Query: 99 FLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQ 158
+ I Y ++G AE +++ M + G +P + ++++L++ YG GR +A + +RM
Sbjct: 640 YTTFIQTYCREGRLQDAEDMVAKMKENGVSPDLFTYSSLIKGYGDLGRTNSAFVVLKRMH 699
Query: 159 SSGPRPSALTYQIILKLFVEA--NKFKEAE------------EVFMTLLDE-EKSPLKPD 203
+G PS T+ ++K +E K K E ++ + LL++ + + P+
Sbjct: 700 DTGCEPSQHTFLSLIKHLLEMKYGKVKGGEPGVCVMSNMMEFDIVVELLEKMVEHGVTPN 759
Query: 204 QKMFHMMIYMYKKAGGYEKARKLFALMAER-GVQQSTVTYNSLMSFET---NYKEVSKIY 259
K + ++ + G A K+F M ++ G+ S + +N+L+S + E +K+
Sbjct: 760 AKSYEKLMLGICEIGNLRVAEKVFDHMQQKEGISPSELVFNALLSCCCKLEKHNEAAKVV 819
Query: 260 DQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAIS 319
D M G P + S +LI K +E +VF+ +L G A+ I++D
Sbjct: 820 DDMICVGHLPQLESCKILICRLYKKGEKERGTSVFQNLLQCGYYDDELAWKIIIDGVGKQ 879
Query: 320 GMVDQARTVFKCMRRDRCSPDICSYTTML 348
G+V+ +F M ++ C+ +Y+ ++
Sbjct: 880 GLVEAFYELFNVMEKNGCTFSSQTYSLLI 908
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 86/421 (20%), Positives = 162/421 (38%), Gaps = 69/421 (16%)
Query: 92 WDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAE 151
W + M I + K +A + + +K P+VV +TAL++ Y + G+ A
Sbjct: 498 WTYTSM-----IDSLCKSKRVEEACDLFDSLEQKDVIPNVVMYTALIDGYCKAGKVNEAH 552
Query: 152 AIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEE--KSPLKPDQKMFHM 209
+ +M S P++LT+ ++ K KEA TLL+E+ K L+P +
Sbjct: 553 LMLEKMLSKNCLPNSLTFNALIHGLCTDGKLKEA-----TLLEEKMVKIDLQPTVSTDTI 607
Query: 210 MIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSF---ETNYKEVSKIYDQMQRAG 266
+I+ K G ++ A + F M G + TY + + E ++ + +M+ G
Sbjct: 608 LIHRLLKDGDFDHAYRRFQQMLSSGTKPDAHTYTTFIQTYCREGRLQDAEDMVAKMKENG 667
Query: 267 LQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAF---------- 316
+ PD+ +Y+ LI YG R A V + M D G P+ + L+
Sbjct: 668 VSPDLFTYSSLIKGYGDLGRTNSAFVVLKRMHDTGCEPSQHTFLSLIKHLLEMKYGKVKG 727
Query: 317 ------AISGMV--DQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLK 368
+S M+ D + + M +P+ SY ++ ++ AEK F ++
Sbjct: 728 GEPGVCVMSNMMEFDIVVELLEKMVEHGVTPNAKSYEKLMLGICEIGNLRVAEKVFDHMQ 787
Query: 369 Q-DGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKP------------------ 409
Q +G P+ + + L+ K+ + ++ D M G P
Sbjct: 788 QKEGISPSELVFNALLSCCCKLEKHNEAAKVVDDMICVGHLPQLESCKILICRLYKKGEK 847
Query: 410 -----------------NQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNIL 452
++ + I+D GK ++ + ME G + ++L
Sbjct: 848 ERGTSVFQNLLQCGYYDDELAWKIIIDGVGKQGLVEAFYELFNVMEKNGCTFSSQTYSLL 907
Query: 453 L 453
+
Sbjct: 908 I 908
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 52/254 (20%), Positives = 118/254 (46%), Gaps = 7/254 (2%)
Query: 236 QQSTVTYNSLMSFETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFE 295
+ S +Y SL++ N V ++ D V+ L + + ++E+ +
Sbjct: 120 KHSVYSYASLLTLLINNGYVGVVFKIRLLMIKSCDSVADTLFVLDLCRKMNKDESFELKY 179
Query: 296 EMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNAS 355
+++ YN LL++ A G+VD+ + V+ M D+ P+I +Y M++ Y
Sbjct: 180 KLIIG-------CYNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKVG 232
Query: 356 DMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFT 415
++E A ++ + + G P+ TY +LI GY + +L+ +++ +M + G + N+ +T
Sbjct: 233 NVEEANQYVSMIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFKEMPLKGCRRNEVAYT 292
Query: 416 TIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHP 475
++ + D A+ + +M+ P + +L+ ++ ++EA L+
Sbjct: 293 HLIHGLCVERRIDEAMDLFVKMKDDDCYPTVRTYTVLIKALCGSERKSEALNLVKEMEEK 352
Query: 476 NNEPGINGLSISVD 489
+P I+ ++ +D
Sbjct: 353 GIKPNIHTYTVLID 366
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 70/307 (22%), Positives = 132/307 (42%), Gaps = 25/307 (8%)
Query: 101 MLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSS 160
+LI K GDF+ A + M G P ++T ++ Y R GR ++AE + +M+ +
Sbjct: 607 ILIHRLLKDGDFDHAYRRFQQMLSSGTKPDAHTYTTFIQTYCREGRLQDAEDMVAKMKEN 666
Query: 161 GPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMF-----HMMIYMYK 215
G P TY ++K + + + A F+ L + +P Q F H++ Y
Sbjct: 667 GVSPDLFTYSSLIKGYGDLGRTNSA---FVVLKRMHDTGCEPSQHTFLSLIKHLLEMKYG 723
Query: 216 KAGG-------------YEKARKLFALMAERGVQQSTVTYNSLMSFET---NYKEVSKIY 259
K G ++ +L M E GV + +Y LM N + K++
Sbjct: 724 KVKGGEPGVCVMSNMMEFDIVVELLEKMVEHGVTPNAKSYEKLMLGICEIGNLRVAEKVF 783
Query: 260 DQMQ-RAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAI 318
D MQ + G+ P + + L++ K + EA V ++M+ G P ++ IL+
Sbjct: 784 DHMQQKEGISPSELVFNALLSCCCKLEKHNEAAKVVDDMICVGHLPQLESCKILICRLYK 843
Query: 319 SGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVIT 378
G ++ +VF+ + + D ++ ++ +E + F ++++G + T
Sbjct: 844 KGEKERGTSVFQNLLQCGYYDDELAWKIIIDGVGKQGLVEAFYELFNVMEKNGCTFSSQT 903
Query: 379 YGTLIKG 385
Y LI+G
Sbjct: 904 YSLLIEG 910
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 91/198 (45%)
Query: 273 SYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCM 332
Y L+N+ + +E V+ EML+ V P YN +++ + G V++A +
Sbjct: 185 CYNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKVGNVEEANQYVSMI 244
Query: 333 RRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNL 392
PD +YT+++ Y D++ A K F+ + G N + Y LI G +
Sbjct: 245 VEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFKEMPLKGCRRNEVAYTHLIHGLCVERRI 304
Query: 393 EKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNIL 452
++ M+++ KM+ + P +T ++ A ++ A+ KEME G P+ +L
Sbjct: 305 DEAMDLFVKMKDDDCYPTVRTYTVLIKALCGSERKSEALNLVKEMEEKGIKPNIHTYTVL 364
Query: 453 LSLAKTADERNEANELLG 470
+ + + +A ELLG
Sbjct: 365 IDSLCSQCKLEKARELLG 382
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 95/217 (43%), Gaps = 3/217 (1%)
Query: 241 TYNSLMSFETNY---KEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEM 297
YN+L++ + E+ ++Y +M + P++ +Y ++N Y K EEA +
Sbjct: 185 CYNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKVGNVEEANQYVSMI 244
Query: 298 LDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDM 357
++AG+ P Y L+ + +D A VFK M C + +YT ++ +
Sbjct: 245 VEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFKEMPLKGCRRNEVAYTHLIHGLCVERRI 304
Query: 358 EGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTI 417
+ A F ++K D P V TY LIK + + + +M GIKPN +T +
Sbjct: 305 DEAMDLFVKMKDDDCYPTVRTYTVLIKALCGSERKSEALNLVKEMEEKGIKPNIHTYTVL 364
Query: 418 MDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLS 454
+D+ + A +M G P+ N L++
Sbjct: 365 IDSLCSQCKLEKARELLGQMLEKGLMPNVITYNALIN 401
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 73/348 (20%), Positives = 139/348 (39%), Gaps = 25/348 (7%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + F LI G +A + M K P+V + T L+ + G + +A F
Sbjct: 566 NSLTFNALIHGLCTDGKLKEATLLEEKMVKIDLQPTVSTDTILIHRLLKDGDFDHAYRRF 625
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
++M SSG +P A TY ++ + + ++AE++ + +++ + PD + +I Y
Sbjct: 626 QQMLSSGTKPDAHTYTTFIQTYCREGRLQDAEDMVAKM---KENGVSPDLFTYSSLIKGY 682
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSL---------------------MSFETNYK 253
G A + M + G + S T+ SL MS +
Sbjct: 683 GDLGRTNSAFVVLKRMHDTGCEPSQHTFLSLIKHLLEMKYGKVKGGEPGVCVMSNMMEFD 742
Query: 254 EVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDA-GVRPTHKAYNIL 312
V ++ ++M G+ P+ SY L+ + A VF+ M G+ P+ +N L
Sbjct: 743 IVVELLEKMVEHGVTPNAKSYEKLMLGICEIGNLRVAEKVFDHMQQKEGISPSELVFNAL 802
Query: 313 LDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGF 372
L ++A V M P + S ++ + E F+ L Q G+
Sbjct: 803 LSCCCKLEKHNEAAKVVDDMICVGHLPQLESCKILICRLYKKGEKERGTSVFQNLLQCGY 862
Query: 373 VPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDA 420
+ + + +I G K +E E+++ M NG + ++ +++
Sbjct: 863 YDDELAWKIIIDGVGKQGLVEAFYELFNVMEKNGCTFSSQTYSLLIEG 910
>gi|224713518|gb|ACN62066.1| PPR-817 [Zea mays]
Length = 817
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 92/355 (25%), Positives = 170/355 (47%), Gaps = 6/355 (1%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
++ A K +KAE L M K P+ ++ L+ Y G++K A +F+ M+
Sbjct: 263 VVHALCKARAMDKAEAFLRQMVNKRVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHS 322
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
P +T +++ + K KEA +VF T+ + ++P D +++M+ Y G
Sbjct: 323 ILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNP---DVFSYNIMLNGYATKGCLV 379
Query: 222 KARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSK---IYDQMQRAGLQPDVVSYALLI 278
LF LM G+ T+N L+ N + K I+++M+ G++PDVV+Y +I
Sbjct: 380 DMTDLFDLMLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVI 439
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCS 338
A + + ++A+ F +M+D GV P AYN L+ F G + +A+ + + +
Sbjct: 440 AALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMH 499
Query: 339 PDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEI 398
DI ++++++ + A+ F G P+ + Y L+ GY V +EK + +
Sbjct: 500 LDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRV 559
Query: 399 YDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILL 453
+D M GI+PN + T+++ Y K D + ++EM G P +I++
Sbjct: 560 FDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIII 614
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 90/363 (24%), Positives = 166/363 (45%), Gaps = 11/363 (3%)
Query: 91 WWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNA 150
++ FN +LI AY G +KA + + M G P VV++ ++ A R G+ +A
Sbjct: 397 FYTFN-----VLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDA 451
Query: 151 EAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMM 210
F +M G P Y +++ F +A+E+ +++ + + D F +
Sbjct: 452 MEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMN---NGMHLDIVFFSSI 508
Query: 211 IYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLM---SFETNYKEVSKIYDQMQRAGL 267
I K G A+ +F L G+ V YN LM ++ +++D M AG+
Sbjct: 509 INNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGI 568
Query: 268 QPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQART 327
+P+VV Y L+N Y K R +E L++F EML G++P+ Y+I++D +G A+
Sbjct: 569 EPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFEAGRTVPAKM 628
Query: 328 VFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYA 387
F M + DIC+Y +L + A F+ L+ N+IT T+I G
Sbjct: 629 KFHEMTESGIAMDICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIDGMF 688
Query: 388 KVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQK 447
+ +E+ +++ + + + P+ ++ ++ K + A + M++ G P+ +
Sbjct: 689 QTRRVEEAKDLFASISRSRLVPSVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPNSR 748
Query: 448 AKN 450
N
Sbjct: 749 LLN 751
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 97/364 (26%), Positives = 169/364 (46%), Gaps = 8/364 (2%)
Query: 113 NKAEKVLSFMN---KKGYAPSVVSHTALMEAYGRGGRYKNA-EAIFRRMQSSGPRPSALT 168
++ E L+F + G +++ L+E + R A + + R G P +
Sbjct: 128 HRPELALAFFGQLLRTGLRVNIIIANHLLEGFCEAKRTDEALDILLHRTPELGCVPDVFS 187
Query: 169 YQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFA 228
Y I+LK + K +A+++ + ++ E + P+ ++ +I + K G KA LF
Sbjct: 188 YSILLKSLCDQGKSGQADDL-LRMMAEGGAVCSPNVVAYNTVIDGFFKEGDVNKACDLFK 246
Query: 229 LMAERGVQQSTVTYNSLMSFETNYKEVSK---IYDQMQRAGLQPDVVSYALLINAYGKAR 285
M +RG+ VTYNS++ + + K QM + P+ +Y LI Y
Sbjct: 247 EMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPNNWTYNNLIYGYSSTG 306
Query: 286 REEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYT 345
+ +EA+ VF+EM + P ++L+ + G + +AR VF M +PD+ SY
Sbjct: 307 QWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYN 366
Query: 346 TMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVN 405
ML+ Y + F + DG P+ T+ LIK YA L+K M I+++MR +
Sbjct: 367 IMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDH 426
Query: 406 GIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEA 465
G+KP+ + T++ A + D A+ + +M G PD+ A N L+ T +A
Sbjct: 427 GVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKA 486
Query: 466 NELL 469
EL+
Sbjct: 487 KELI 490
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 85/326 (26%), Positives = 159/326 (48%), Gaps = 13/326 (3%)
Query: 128 APSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEE 187
+P+ ++ LM+ R R + A A F ++ +G R + + +L+ F EA + EA +
Sbjct: 111 SPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLEGFCEAKRTDEALD 170
Query: 188 VFMTLLDEEKSP---LKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQS--TVTY 242
+ + ++P PD + +++ G +A L +MAE G S V Y
Sbjct: 171 ILL-----HRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAY 225
Query: 243 NSLMSF---ETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLD 299
N+++ E + + ++ +M + G+ PD+V+Y +++A KAR ++A A +M++
Sbjct: 226 NTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVN 285
Query: 300 AGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEG 359
V P + YN L+ ++ +G +A VFK MRR PD+ + + ++ + ++
Sbjct: 286 KRVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKE 345
Query: 360 AEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMD 419
A F + G P+V +Y ++ GYA L M +++D M +GI P+ F ++
Sbjct: 346 ARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIK 405
Query: 420 AYGKNKDFDSAVVWYKEMESCGFPPD 445
AY D A++ + EM G PD
Sbjct: 406 AYANCGMLDKAMIIFNEMRDHGVKPD 431
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 106/225 (47%), Gaps = 7/225 (3%)
Query: 267 LQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQAR 326
L P +YA+L++ +A R E ALA F ++L G+R N LL+ F + D+A
Sbjct: 110 LSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLEGFCEAKRTDEAL 169
Query: 327 TVFKCMRRDR---CSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFV--PNVITYGT 381
+ + R C PD+ SY+ +L + + A+ R + + G V PNV+ Y T
Sbjct: 170 DIL--LHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAYNT 227
Query: 382 LIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCG 441
+I G+ K ++ K +++ +M GI P+ + +++ A K + D A + ++M +
Sbjct: 228 VIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKR 287
Query: 442 FPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGINGLSI 486
P+ N L+ + + EA + + P + LS+
Sbjct: 288 VLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSM 332
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/232 (24%), Positives = 104/232 (44%), Gaps = 7/232 (3%)
Query: 233 RGVQQSTVTYNSLMSFETNYKE---VSKIYDQMQRAGLQPDVVSYALLINAYGKARREEE 289
R + ++ TY LM T + Q+ R GL+ +++ L+ + +A+R +E
Sbjct: 108 RVLSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLEGFCEAKRTDE 167
Query: 290 ALAVF-EEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRD--RCSPDICSYTT 346
AL + + G P +Y+ILL + G QA + + M CSP++ +Y T
Sbjct: 168 ALDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAYNT 227
Query: 347 MLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNG 406
++ + D+ A F+ + Q G P+++TY +++ K ++K +M
Sbjct: 228 VIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKR 287
Query: 407 IKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILL-SLAK 457
+ PN + ++ Y + AV +KEM PD ++L+ SL K
Sbjct: 288 VLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCK 339
>gi|296089773|emb|CBI39592.3| unnamed protein product [Vitis vinifera]
Length = 577
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 101/388 (26%), Positives = 186/388 (47%), Gaps = 9/388 (2%)
Query: 88 IQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRY 147
+ SW N + ML+ AY K G+ + A + G+ S +S ++ + + GR
Sbjct: 151 LGSWGCANSIIVDMLVWAYVKNGEMDLALEGFDRAGDYGFRLSALSCNPMLVSLVKEGRI 210
Query: 148 KNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMF 207
E++++ M + +T+ +++ + KF++A +V + D + P +
Sbjct: 211 GVVESVYKEMIRRRIGVNVVTFDVVINGLCKVGKFQKAGDV---VEDMKAWGFSPSVITY 267
Query: 208 HMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLM---SFETNYKEVSKIYDQMQR 264
+ +I Y KAG KA L M + + + +T+N L+ + N K++++MQR
Sbjct: 268 NTIIDGYCKAGKMFKADALLKEMVAKRIHPNEITFNILIDGFCRDENVTAAKKVFEEMQR 327
Query: 265 AGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQ 324
GLQP+VV+Y LIN + +EAL + ++M G++P YN L++ F M+ +
Sbjct: 328 QGLQPNVVTYNSLINGLCSNGKLDEALGLQDKMSGMGLKPNVVTYNALINGFCKKKMLKE 387
Query: 325 ARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIK 384
AR + + + +P++ ++ T++ AY A M+ A + G PNV TY LI
Sbjct: 388 AREMLDDIGKRGLAPNVITFNTLIDAYGKAGRMDDAFLLRSMMLDTGVCPNVSTYNCLIV 447
Query: 385 GYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKE---MESCG 441
G+ + N+++ ++ +M NG+K + + ++DA K + AV E ME G
Sbjct: 448 GFCREGNVKEARKLAKEMEGNGLKADLVTYNILVDALCKKGETRKAVRLLDEMTLMEKKG 507
Query: 442 FPPDQKAKNILLSLAKTADERNEANELL 469
+ N+L+ + EAN LL
Sbjct: 508 RRANIVTYNVLIKGFCNKGKLEEANRLL 535
Score = 118 bits (296), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 101/433 (23%), Positives = 188/433 (43%), Gaps = 49/433 (11%)
Query: 27 GKKNWRRLMNQIEEVGSAVAVLRSERTRGQPLPKDLVLGTLVRLKQLKKWNVVSEVLEWL 86
K++W +L ++E + + + QP DL+L + Q K++ + V ++
Sbjct: 57 AKQHWSKLKTIVKETNPSSLLQHLFNSEAQP---DLIL-CYFKWTQ-KEFGAIHNVEQFC 111
Query: 87 RIQSWW----DFNEMDFLMLITAYGKQGDFNKAE--KVLSFMNKKGYAPSVVSHTALMEA 140
R+ ++N++ L+ ++ K ++ + LS + G A S++ L+ A
Sbjct: 112 RLLHLLANAKNYNKIR--ALLDSFAKNAHYSNSTIFHSLSVLGSWGCANSIIVDM-LVWA 168
Query: 141 YGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPL 200
Y + G A F R G R SAL+ +L V+ + E V+ ++ + +
Sbjct: 169 YVKNGEMDLALEGFDRAGDYGFRLSALSCNPMLVSLVKEGRIGVVESVYKEMI---RRRI 225
Query: 201 KPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSKIYD 260
+ F ++I K G ++KA + +
Sbjct: 226 GVNVVTFDVVINGLCKVGKFQKA--------------------------------GDVVE 253
Query: 261 QMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISG 320
M+ G P V++Y +I+ Y KA + +A A+ +EM+ + P +NIL+D F
Sbjct: 254 DMKAWGFSPSVITYNTIIDGYCKAGKMFKADALLKEMVAKRIHPNEITFNILIDGFCRDE 313
Query: 321 MVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYG 380
V A+ VF+ M+R P++ +Y ++++ + ++ A ++ G PNV+TY
Sbjct: 314 NVTAAKKVFEEMQRQGLQPNVVTYNSLINGLCSNGKLDEALGLQDKMSGMGLKPNVVTYN 373
Query: 381 TLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESC 440
LI G+ K L++ E+ D + G+ PN F T++DAYGK D A + M
Sbjct: 374 ALINGFCKKKMLKEAREMLDDIGKRGLAPNVITFNTLIDAYGKAGRMDDAFLLRSMMLDT 433
Query: 441 GFPPDQKAKNILL 453
G P+ N L+
Sbjct: 434 GVCPNVSTYNCLI 446
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 75/269 (27%), Positives = 121/269 (44%), Gaps = 44/269 (16%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
NE+ F +LI + + + A+KV M ++G P+VV++ +L+ G+ A +
Sbjct: 298 NEITFNILIDGFCRDENVTAAKKVFEEMQRQGLQPNVVTYNSLINGLCSNGKLDEALGLQ 357
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
+M G +P+ +TY ++ F + KEA E+ L D K L P+ F+ +I Y
Sbjct: 358 DKMSGMGLKPNVVTYNALINGFCKKKMLKEAREM---LDDIGKRGLAPNVITFNTLIDAY 414
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSLM---SFETNYKEVSKIYDQMQRAGLQPDV 271
KAG + A L ++M + GV + TYN L+ E N KE K+ +M+ GL+ D+
Sbjct: 415 GKAGRMDDAFLLRSMMLDTGVCPNVSTYNCLIVGFCREGNVKEARKLAKEMEGNGLKADL 474
Query: 272 VSYALLINAYGK--------------------ARRE------------------EEALAV 293
V+Y +L++A K RR EEA +
Sbjct: 475 VTYNILVDALCKKGETRKAVRLLDEMTLMEKKGRRANIVTYNVLIKGFCNKGKLEEANRL 534
Query: 294 FEEMLDAGVRPTHKAYNILLDAFAISGMV 322
EML+ G+ P Y+IL D G +
Sbjct: 535 LNEMLEKGLIPNRTTYDILRDEMMEKGFI 563
>gi|115468576|ref|NP_001057887.1| Os06g0565000 [Oryza sativa Japonica Group]
gi|113595927|dbj|BAF19801.1| Os06g0565000 [Oryza sativa Japonica Group]
gi|125597608|gb|EAZ37388.1| hypothetical protein OsJ_21726 [Oryza sativa Japonica Group]
Length = 687
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 109/426 (25%), Positives = 185/426 (43%), Gaps = 48/426 (11%)
Query: 67 LVRLKQLKKWNVVSEVLEWLRIQSWWDFN-EMDFLMLITAYGKQGDFNKAEKVLSFMNKK 125
L+RL + + +V + E L + + FN +DFL K+G+ +A + S M +
Sbjct: 164 LLRLARDRSGRLVRRLFEQLPAPNVFTFNIVIDFLC------KEGELAEARSLFSRMKEM 217
Query: 126 GYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEA 185
G P VV+ +L++ YG+ G E + M+ SG + +TY ++ F + + + A
Sbjct: 218 GCLPDVVTFNSLIDGYGKCGELDEVEQLVEEMRRSGCKADVVTYNALINCFCKFGRMETA 277
Query: 186 EEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSL 245
F + ++ + + F + + K G +A KLFA M RG+ + TY L
Sbjct: 278 YGYFAAM---KREGVMANVVTFSTFVDAFCKEGLVREAMKLFAQMRVRGMALNEFTYTCL 334
Query: 246 MSFETNYKEVSK---IYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGV 302
+ + + D+M R G+ +VV+Y +L++ K R+ EA V M AGV
Sbjct: 335 IDGTCKAGRLDDAIVLLDEMVRQGVPLNVVTYTVLVDGLCKERKVAEAEDVLRMMEKAGV 394
Query: 303 RPTHKAYNILLDAF------------------------------AISGM-----VDQART 327
R Y L+ I G+ +D+A++
Sbjct: 395 RANELLYTTLIHGHFMNKNSEKALGLLSEMKNKGLELDISLYGALIQGLCNVHKLDEAKS 454
Query: 328 VFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYA 387
+ M P+ YTTM+ A + + A +++ GF PNVITY LI G
Sbjct: 455 LLTKMDESGLEPNYIIYTTMMDACFKSGKVPEAIAMLQKILDSGFQPNVITYCALIDGLC 514
Query: 388 KVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQK 447
K ++++ + ++KMR G+ PN +T ++D KN + AV + EM G D+
Sbjct: 515 KAGSIDEAISHFNKMRDLGLDPNVQAYTALVDGLCKNGCLNEAVQLFNEMVHKGMSLDKV 574
Query: 448 AKNILL 453
LL
Sbjct: 575 VYTALL 580
Score = 132 bits (331), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 86/363 (23%), Positives = 171/363 (47%), Gaps = 6/363 (1%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + F + A+ K+G +A K+ + M +G A + ++T L++ + GR +A +
Sbjct: 292 NVVTFSTFVDAFCKEGLVREAMKLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIVLL 351
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
M G + +TY +++ + K EAE+V + EK+ ++ ++ ++ +I+ +
Sbjct: 352 DEMVRQGVPLNVVTYTVLVDGLCKERKVAEAEDVLRMM---EKAGVRANELLYTTLIHGH 408
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYK---EVSKIYDQMQRAGLQPDV 271
EKA L + M +G++ Y +L+ N E + +M +GL+P+
Sbjct: 409 FMNKNSEKALGLLSEMKNKGLELDISLYGALIQGLCNVHKLDEAKSLLTKMDESGLEPNY 468
Query: 272 VSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKC 331
+ Y +++A K+ + EA+A+ +++LD+G +P Y L+D +G +D+A + F
Sbjct: 469 IIYTTMMDACFKSGKVPEAIAMLQKILDSGFQPNVITYCALIDGLCKAGSIDEAISHFNK 528
Query: 332 MRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNN 391
MR P++ +YT ++ + A + F + G + + Y L+ GY K N
Sbjct: 529 MRDLGLDPNVQAYTALVDGLCKNGCLNEAVQLFNEMVHKGMSLDKVVYTALLDGYLKQGN 588
Query: 392 LEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNI 451
L + KM +G++ + +T + + A + EM G PD+ N
Sbjct: 589 LHDAFALKAKMIDSGLQLDLFCYTCFISGFCNLNMMPEAREVFSEMIGHGIAPDRAVYNC 648
Query: 452 LLS 454
L+S
Sbjct: 649 LIS 651
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 86/349 (24%), Positives = 167/349 (47%), Gaps = 8/349 (2%)
Query: 94 FNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAI 153
NE + LI K G + A +L M ++G +VV++T L++ + + AE +
Sbjct: 326 LNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQGVPLNVVTYTVLVDGLCKERKVAEAEDV 385
Query: 154 FRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSP-LKPDQKMFHMMIY 212
R M+ +G R + L Y + + + + E + LL E K+ L+ D ++ +I
Sbjct: 386 LRMMEKAGVRANELLYTTL----IHGHFMNKNSEKALGLLSEMKNKGLELDISLYGALIQ 441
Query: 213 MYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSKIYDQMQR---AGLQP 269
++A+ L M E G++ + + Y ++M +V + +Q+ +G QP
Sbjct: 442 GLCNVHKLDEAKSLLTKMDESGLEPNYIIYTTMMDACFKSGKVPEAIAMLQKILDSGFQP 501
Query: 270 DVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVF 329
+V++Y LI+ KA +EA++ F +M D G+ P +AY L+D +G +++A +F
Sbjct: 502 NVITYCALIDGLCKAGSIDEAISHFNKMRDLGLDPNVQAYTALVDGLCKNGCLNEAVQLF 561
Query: 330 KCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKV 389
M S D YT +L Y+ ++ A ++ G ++ Y I G+ +
Sbjct: 562 NEMVHKGMSLDKVVYTALLDGYLKQGNLHDAFALKAKMIDSGLQLDLFCYTCFISGFCNL 621
Query: 390 NNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEME 438
N + + E++ +M +GI P++ ++ ++ Y K + + A+ EME
Sbjct: 622 NMMPEAREVFSEMIGHGIAPDRAVYNCLISKYQKLGNLEEAISLQDEME 670
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 77/281 (27%), Positives = 132/281 (46%), Gaps = 3/281 (1%)
Query: 202 PDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLM---SFETNYKEVSKI 258
P+ F+++I K G +AR LF+ M E G VT+NSL+ EV ++
Sbjct: 186 PNVFTFNIVIDFLCKEGELAEARSLFSRMKEMGCLPDVVTFNSLIDGYGKCGELDEVEQL 245
Query: 259 YDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAI 318
++M+R+G + DVV+Y LIN + K R E A F M GV ++ +DAF
Sbjct: 246 VEEMRRSGCKADVVTYNALINCFCKFGRMETAYGYFAAMKREGVMANVVTFSTFVDAFCK 305
Query: 319 SGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVIT 378
G+V +A +F MR + + +YT ++ A ++ A + + G NV+T
Sbjct: 306 EGLVREAMKLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQGVPLNVVT 365
Query: 379 YGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEME 438
Y L+ G K + + ++ M G++ N+ ++TT++ + NK+ + A+ EM+
Sbjct: 366 YTVLVDGLCKERKVAEAEDVLRMMEKAGVRANELLYTTLIHGHFMNKNSEKALGLLSEMK 425
Query: 439 SCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEP 479
+ G D L+ + +EA LL + EP
Sbjct: 426 NKGLELDISLYGALIQGLCNVHKLDEAKSLLTKMDESGLEP 466
Score = 58.5 bits (140), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 64/135 (47%), Gaps = 3/135 (2%)
Query: 92 WDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAE 151
D N + L+ K G N+A ++ + M KG + V +TAL++ Y + G +A
Sbjct: 534 LDPNVQAYTALVDGLCKNGCLNEAVQLFNEMVHKGMSLDKVVYTALLDGYLKQGNLHDAF 593
Query: 152 AIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMI 211
A+ +M SG + Y + F N EA EVF ++ + PD+ +++ +I
Sbjct: 594 ALKAKMIDSGLQLDLFCYTCFISGFCNLNMMPEAREVFSEMIGH---GIAPDRAVYNCLI 650
Query: 212 YMYKKAGGYEKARKL 226
Y+K G E+A L
Sbjct: 651 SKYQKLGNLEEAISL 665
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 53/228 (23%), Positives = 88/228 (38%), Gaps = 43/228 (18%)
Query: 75 KWNVVSEVLEWLR--IQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVV 132
K V E + L+ + S + N + + LI K G ++A + M G P+V
Sbjct: 480 KSGKVPEAIAMLQKILDSGFQPNVITYCALIDGLCKAGSIDEAISHFNKMRDLGLDPNVQ 539
Query: 133 SHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTL 192
++TAL++ + G A +F M G M+L
Sbjct: 540 AYTALVDGLCKNGCLNEAVQLFNEMVHKG----------------------------MSL 571
Query: 193 LDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNY 252
D+ ++ ++ Y K G A L A M + G+Q Y +S N
Sbjct: 572 ----------DKVVYTALLDGYLKQGNLHDAFALKAKMIDSGLQLDLFCYTCFISGFCNL 621
Query: 253 K---EVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEM 297
E +++ +M G+ PD Y LI+ Y K EEA+++ +EM
Sbjct: 622 NMMPEAREVFSEMIGHGIAPDRAVYNCLISKYQKLGNLEEAISLQDEM 669
>gi|297809467|ref|XP_002872617.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297318454|gb|EFH48876.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 584
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 105/448 (23%), Positives = 209/448 (46%), Gaps = 18/448 (4%)
Query: 77 NVVSEVLEWLRIQSWWDF-NE---------MDFLMLITAYGKQGDFNKAEKVLSFMNKKG 126
N+++ V+ WW F NE F ++I + G+ K+ +L + + G
Sbjct: 134 NLLTFVVGSSSFNQWWCFFNESKIKVVLDVYSFGIVIKGCCEAGEIEKSFDLLVELREFG 193
Query: 127 YAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAE 186
++P+VV +T L++ + G + A+ +F M G + TY +++ + K+
Sbjct: 194 FSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKFGLVANEWTYTVLIHGLFKNGIKKQGF 253
Query: 187 EVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSL- 245
E++ + ++ + P+ ++ ++ K G + A K+F M ERGV + VTYN+L
Sbjct: 254 EMYEKM---QEHGVFPNLHTYNCVMNQLCKDGRTKDAFKVFDEMRERGVSCNIVTYNTLI 310
Query: 246 --MSFETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVR 303
+ E E +++ DQM+ G+ P++++Y LI+ + R+ +AL++ ++ G+
Sbjct: 311 GGLCREMKANEANEVMDQMKSDGINPNLITYNTLIDGFCGVRKLGKALSLCRDLKSRGLS 370
Query: 304 PTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKF 363
P+ YNIL+ F G A V K M P +YT ++ + + +ME A +
Sbjct: 371 PSLVTYNILVSGFCKKGDTSGAGKVVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQL 430
Query: 364 FRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGK 423
+++ G P+V TY LI G+ + + ++ M +PN+ I+ T++ Y K
Sbjct: 431 RSSMEELGLTPDVHTYSVLIHGFCIKGRMNEASRLFKSMVEKKFEPNEVIYNTMVLGYCK 490
Query: 424 NKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGING 483
A+ ++EME PP+ + ++ + + EA L+ P +
Sbjct: 491 EGSSYRALRLFREMEEKELPPNVASYRYMIEVLCKERKSKEAEGLVEKMIDSGIGPSDSI 550
Query: 484 LSISVDEEDDDDDD--DEDDDDNIYHDG 509
L++ ++D DE++ ++ DG
Sbjct: 551 LNLISRAKNDSHSRSMDEEEPASMVFDG 578
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/235 (24%), Positives = 105/235 (44%), Gaps = 13/235 (5%)
Query: 220 YEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSKIYDQMQRAGLQPDVVSYALLIN 279
Y A+ L + +Q T +SL+ + T E SK ++ Y ++IN
Sbjct: 55 YSHAQSLLLQVISGKIQSQFFTSSSLLHYLTE-SETSKTKSRL-----------YEVIIN 102
Query: 280 AYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSP 339
AY +++ + ++ F EM+D G P +N LL S +Q F + +
Sbjct: 103 AYVQSQSLDSSIYYFNEMVDKGFVPGSNCFNNLLTFVVGSSSFNQWWCFFN-ESKIKVVL 161
Query: 340 DICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIY 399
D+ S+ ++ A ++E + L++ GF PNV+ Y TLI G K +EK +++
Sbjct: 162 DVYSFGIVIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKKGEIEKAKDLF 221
Query: 400 DKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLS 454
+M G+ N+ +T ++ KN Y++M+ G P+ N +++
Sbjct: 222 FEMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEHGVFPNLHTYNCVMN 276
>gi|356513567|ref|XP_003525484.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74850,
chloroplastic-like [Glycine max]
Length = 857
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 97/401 (24%), Positives = 179/401 (44%), Gaps = 5/401 (1%)
Query: 76 WNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHT 135
W + ++++ Q W NE ++IT G++G +K +V M G +V S+T
Sbjct: 114 WQRSLRLFKYMQRQIWCKPNEHIHTIMITLLGREGLLDKCREVFDEMPSNGVVRTVYSYT 173
Query: 136 ALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDE 195
A++ AYGR G++ + + M+ PS LTY ++ + E + +
Sbjct: 174 AIINAYGRNGQFHASLELLNGMKQERVSPSILTYNTVINACARGGL--DWEGLLGLFAEM 231
Query: 196 EKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLM-SFE--TNY 252
++PD ++ ++ G ++A +F M E G+ TY+ L+ +F
Sbjct: 232 RHEGIQPDVITYNTLLGACAHRGLGDEAEMVFRTMNESGIVPDINTYSYLVQTFGKLNRL 291
Query: 253 KEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNIL 312
++VS++ +M+ G PD+ SY +L+ AY + +EA+ VF +M AG Y++L
Sbjct: 292 EKVSELLREMECGGNLPDITSYNVLLEAYAELGSIKEAMGVFRQMQAAGCVANAATYSVL 351
Query: 313 LDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGF 372
L+ + G D R +F M+ PD +Y ++ + + F + ++
Sbjct: 352 LNLYGKHGRYDDVRDLFLEMKVSNTDPDAGTYNILIQVFGEGGYFKEVVTLFHDMAEENV 411
Query: 373 VPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVV 432
PN+ TY LI K E +I M G+ P+ +T +++A+G+ ++ A+V
Sbjct: 412 EPNMQTYEGLIFACGKGGLYEDAKKILLHMNEKGVVPSSKAYTGVIEAFGQAALYEEALV 471
Query: 433 WYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFN 473
+ M G P + N L+ EA +L N
Sbjct: 472 MFNTMNEVGSNPTVETYNSLIHAFARGGLYKEAEAILSRMN 512
Score = 141 bits (356), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 93/339 (27%), Positives = 171/339 (50%), Gaps = 17/339 (5%)
Query: 101 MLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSS 160
+L+ AY + G +A V M G + +++ L+ YG+ GRY + +F M+ S
Sbjct: 315 VLLEAYAELGSIKEAMGVFRQMQAAGCVANAATYSVLLNLYGKHGRYDDVRDLFLEMKVS 374
Query: 161 GPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGY 220
P A TY I++++F E FKE +F + +E ++P+ + + +I+ K G Y
Sbjct: 375 NTDPDAGTYNILIQVFGEGGYFKEVVTLFHDMAEEN---VEPNMQTYEGLIFACGKGGLY 431
Query: 221 EKARKLFALMAERGVQQSTVTYNSLM-SF--ETNYKEVSKIYDQMQRAGLQPDVVSYALL 277
E A+K+ M E+GV S+ Y ++ +F Y+E +++ M G P V +Y L
Sbjct: 432 EDAKKILLHMNEKGVVPSSKAYTGVIEAFGQAALYEEALVMFNTMNEVGSNPTVETYNSL 491
Query: 278 INAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRC 337
I+A+ + +EA A+ M ++G++ ++N +++AF G ++A + M + C
Sbjct: 492 IHAFARGGLYKEAEAILSRMNESGLKRDVHSFNGVIEAFRQGGQYEEAVKSYVEMEKANC 551
Query: 338 SPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAK---VNNLEK 394
P+ + +LS Y +A ++ E+ F+ +K G +P+V+ Y ++ YAK +N+
Sbjct: 552 EPNELTLEAVLSIYCSAGLVDEGEEQFQEIKASGILPSVMCYCMMLALYAKNDRLNDAYN 611
Query: 395 MMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVW 433
+++ MRV+ I +Q I I DFD W
Sbjct: 612 LIDAMITMRVSDI--HQVIGQMI------KGDFDDESNW 642
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 89/371 (23%), Positives = 175/371 (47%), Gaps = 6/371 (1%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
L+ A +G ++AE V MN+ G P + +++ L++ +G+ R + + R M+ G
Sbjct: 246 LLGACAHRGLGDEAEMVFRTMNESGIVPDINTYSYLVQTFGKLNRLEKVSELLREMECGG 305
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
P +Y ++L+ + E KEA VF + + + + + +++ +Y K G Y+
Sbjct: 306 NLPDITSYNVLLEAYAELGSIKEAMGVFRQM---QAAGCVANAATYSVLLNLYGKHGRYD 362
Query: 222 KARKLFALMAERGVQQSTVTYNSLMSF--ETNY-KEVSKIYDQMQRAGLQPDVVSYALLI 278
R LF M TYN L+ E Y KEV ++ M ++P++ +Y LI
Sbjct: 363 DVRDLFLEMKVSNTDPDAGTYNILIQVFGEGGYFKEVVTLFHDMAEENVEPNMQTYEGLI 422
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCS 338
A GK E+A + M + GV P+ KAY +++AF + + ++A +F M +
Sbjct: 423 FACGKGGLYEDAKKILLHMNEKGVVPSSKAYTGVIEAFGQAALYEEALVMFNTMNEVGSN 482
Query: 339 PDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEI 398
P + +Y +++ A+ + AE R+ + G +V ++ +I+ + + E+ ++
Sbjct: 483 PTVETYNSLIHAFARGGLYKEAEAILSRMNESGLKRDVHSFNGVIEAFRQGGQYEEAVKS 542
Query: 399 YDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKT 458
Y +M +PN+ ++ Y D ++E+++ G P ++L+L
Sbjct: 543 YVEMEKANCEPNELTLEAVLSIYCSAGLVDEGEEQFQEIKASGILPSVMCYCMMLALYAK 602
Query: 459 ADERNEANELL 469
D N+A L+
Sbjct: 603 NDRLNDAYNLI 613
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 92/386 (23%), Positives = 173/386 (44%), Gaps = 7/386 (1%)
Query: 98 DFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGR-YKNAEAIFRR 156
+ +I AYG+ G F+ + ++L+ M ++ +PS++++ ++ A RGG ++ +F
Sbjct: 171 SYTAIINAYGRNGQFHASLELLNGMKQERVSPSILTYNTVINACARGGLDWEGLLGLFAE 230
Query: 157 MQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKK 216
M+ G +P +TY +L EAE VF T+ +S + PD + ++ + K
Sbjct: 231 MRHEGIQPDVITYNTLLGACAHRGLGDEAEMVFRTM---NESGIVPDINTYSYLVQTFGK 287
Query: 217 AGGYEKARKLFALMAERGVQQSTVTYNSLMSFET---NYKEVSKIYDQMQRAGLQPDVVS 273
EK +L M G +YN L+ + KE ++ QMQ AG + +
Sbjct: 288 LNRLEKVSELLREMECGGNLPDITSYNVLLEAYAELGSIKEAMGVFRQMQAAGCVANAAT 347
Query: 274 YALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMR 333
Y++L+N YGK R ++ +F EM + P YNIL+ F G + T+F M
Sbjct: 348 YSVLLNLYGKHGRYDDVRDLFLEMKVSNTDPDAGTYNILIQVFGEGGYFKEVVTLFHDMA 407
Query: 334 RDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLE 393
+ P++ +Y ++ A E A+K + + G VP+ Y +I+ + + E
Sbjct: 408 EENVEPNMQTYEGLIFACGKGGLYEDAKKILLHMNEKGVVPSSKAYTGVIEAFGQAALYE 467
Query: 394 KMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILL 453
+ + +++ M G P + +++ A+ + + A M G D + N ++
Sbjct: 468 EALVMFNTMNEVGSNPTVETYNSLIHAFARGGLYKEAEAILSRMNESGLKRDVHSFNGVI 527
Query: 454 SLAKTADERNEANELLGNFNHPNNEP 479
+ + EA + N EP
Sbjct: 528 EAFRQGGQYEEAVKSYVEMEKANCEP 553
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 79/355 (22%), Positives = 169/355 (47%), Gaps = 20/355 (5%)
Query: 145 GRYK-NAEAIFRRMQSSGPRPSALT-------------YQIILKLFVEANKFKEAEEVFM 190
G+Y + E + R+ + PR S + ++ K F + ++ + +F
Sbjct: 63 GKYSYDVETLINRLTALPPRGSIARCLDPFKNKLSLNDFALVFKEFAQRGDWQRSLRLFK 122
Query: 191 TLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSF-- 248
+ + + KP++ + +MI + + G +K R++F M GV ++ +Y ++++
Sbjct: 123 YM--QRQIWCKPNEHIHTIMITLLGREGLLDKCREVFDEMPSNGVVRTVYSYTAIINAYG 180
Query: 249 -ETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEAL-AVFEEMLDAGVRPTH 306
+ ++ + M++ + P +++Y +INA + + E L +F EM G++P
Sbjct: 181 RNGQFHASLELLNGMKQERVSPSILTYNTVINACARGGLDWEGLLGLFAEMRHEGIQPDV 240
Query: 307 KAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRR 366
YN LL A A G+ D+A VF+ M PDI +Y+ ++ + + +E + R
Sbjct: 241 ITYNTLLGACAHRGLGDEAEMVFRTMNESGIVPDINTYSYLVQTFGKLNRLEKVSELLRE 300
Query: 367 LKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKD 426
++ G +P++ +Y L++ YA++ ++++ M ++ +M+ G N ++ +++ YGK+
Sbjct: 301 MECGGNLPDITSYNVLLEAYAELGSIKEAMGVFRQMQAAGCVANAATYSVLLNLYGKHGR 360
Query: 427 FDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGI 481
+D + EM+ PD NIL+ + E L + N EP +
Sbjct: 361 YDDVRDLFLEMKVSNTDPDAGTYNILIQVFGEGGYFKEVVTLFHDMAEENVEPNM 415
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 47/218 (21%), Positives = 99/218 (45%), Gaps = 2/218 (0%)
Query: 274 YALLINAYGKARREEEALAVFEEM-LDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCM 332
+AL+ + + + +L +F+ M +P + I++ G++D+ R VF M
Sbjct: 101 FALVFKEFAQRGDWQRSLRLFKYMQRQIWCKPNEHIHTIMITLLGREGLLDKCREVFDEM 160
Query: 333 RRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVN-N 391
+ + SYT +++AY + + +KQ+ P+++TY T+I A+ +
Sbjct: 161 PSNGVVRTVYSYTAIINAYGRNGQFHASLELLNGMKQERVSPSILTYNTVINACARGGLD 220
Query: 392 LEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNI 451
E ++ ++ +MR GI+P+ + T++ A D A + ++ M G PD +
Sbjct: 221 WEGLLGLFAEMRHEGIQPDVITYNTLLGACAHRGLGDEAEMVFRTMNESGIVPDINTYSY 280
Query: 452 LLSLAKTADERNEANELLGNFNHPNNEPGINGLSISVD 489
L+ + + +ELL N P I ++ ++
Sbjct: 281 LVQTFGKLNRLEKVSELLREMECGGNLPDITSYNVLLE 318
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/242 (21%), Positives = 106/242 (43%), Gaps = 42/242 (17%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
+I A+G+ + +A + + MN+ G P+V ++ +L+ A+ RGG YK AEAI RM SG
Sbjct: 456 VIEAFGQAALYEEALVMFNTMNEVGSNPTVETYNSLIHAFARGGLYKEAEAILSRMNESG 515
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
+ ++ +++ F + +++EA + ++ + EK+ +P++ ++ +Y AG +
Sbjct: 516 LKRDVHSFNGVIEAFRQGGQYEEAVKSYVEM---EKANCEPNELTLEAVLSIYCSAGLVD 572
Query: 222 KARKLFALMAERGVQQSTVTYNSLMSF--------------------------------- 248
+ + F + G+ S + Y +++
Sbjct: 573 EGEEQFQEIKASGILPSVMCYCMMLALYAKNDRLNDAYNLIDAMITMRVSDIHQVIGQMI 632
Query: 249 ------ETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGV 302
E+N++ V ++D++ G + Y L+ A + E A V E G+
Sbjct: 633 KGDFDDESNWQIVEYVFDKLNSEGCGLGMRFYNALLEALWCMFQRERAARVLNEASKRGL 692
Query: 303 RP 304
P
Sbjct: 693 FP 694
>gi|297838419|ref|XP_002887091.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297332932|gb|EFH63350.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 568
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 97/406 (23%), Positives = 192/406 (47%), Gaps = 16/406 (3%)
Query: 77 NVVSEVLEWLRIQSWW----------DFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKG 126
N+++ V+ WW D + F ++I + G+ K+ +L + + G
Sbjct: 134 NLLTFVVGSSSFNQWWRFFNESKIKVDLDVYSFGIVIKGCCEAGEIEKSFDLLVELREFG 193
Query: 127 YAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAE 186
++P+VV +T L++ + G + A+ +F M G + TY +++ + K+
Sbjct: 194 FSPNVVIYTTLIDGCCKRGEIEKAKDLFFEMGKFGLVANEWTYTVLIHGLFKNGIKKQGF 253
Query: 187 EVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSL- 245
E++ + ++ + P+ ++ ++ + K G + A KLF M ERGV + VTYN+L
Sbjct: 254 EMYEKM---QEDGVFPNLYTYNCVMNQHCKDGRTKDAFKLFDEMRERGVSCNIVTYNTLI 310
Query: 246 --MSFETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVR 303
+ E E +K+ DQM+ G+ P++++Y LI+ + + +AL++ ++ G+
Sbjct: 311 GGLCREMKANEANKVMDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLS 370
Query: 304 PTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKF 363
P+ YNIL+ F G A V K M P +YT ++ + +ME A +
Sbjct: 371 PSLVTYNILVSGFCKKGDTSGAGKVVKEMEERGIKPSKITYTILIDTFARMDNMEKAIQL 430
Query: 364 FRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGK 423
+++ G P+V TY LI G+ + + ++ M ++PN+ I+ T++ Y K
Sbjct: 431 RSPMEELGLTPDVHTYSVLIHGFCIKGQMNEASRLFKLMVAKKLEPNKVIYNTMVLGYCK 490
Query: 424 NKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELL 469
A+ ++EME PP+ + ++ + + EA L+
Sbjct: 491 EGSSYRALRLFREMEEKELPPNVASYRYMIEVLCKERKSKEAEGLV 536
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 56/235 (23%), Positives = 106/235 (45%), Gaps = 13/235 (5%)
Query: 220 YEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSKIYDQMQRAGLQPDVVSYALLIN 279
Y A+ L + +Q T +SL+ + T E S+ ++ Y ++IN
Sbjct: 55 YSHAQSLLLQVISGKIQSQFFTSSSLLHYVTE-SETSETKSRL-----------YEVMIN 102
Query: 280 AYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSP 339
AY +++ + +++ F EM+D G P +N LL S +Q F + +
Sbjct: 103 AYVQSQSLDSSISYFNEMVDKGFVPGSNCFNNLLTFVVGSSSFNQWWRFFN-ESKIKVDL 161
Query: 340 DICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIY 399
D+ S+ ++ A ++E + L++ GF PNV+ Y TLI G K +EK +++
Sbjct: 162 DVYSFGIVIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKRGEIEKAKDLF 221
Query: 400 DKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLS 454
+M G+ N+ +T ++ KN Y++M+ G P+ N +++
Sbjct: 222 FEMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEDGVFPNLYTYNCVMN 276
>gi|225431703|ref|XP_002264696.1| PREDICTED: pentatricopeptide repeat-containing protein At2g13420,
mitochondrial [Vitis vinifera]
gi|296088528|emb|CBI37519.3| unnamed protein product [Vitis vinifera]
Length = 525
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 96/407 (23%), Positives = 189/407 (46%), Gaps = 21/407 (5%)
Query: 55 GQPLPKDLVLGTLVRLKQLKKWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNK 114
G L LV TL+RL+ + K + W + Q+ + + + ++I K F+
Sbjct: 78 GIALSTHLVHQTLLRLRNVSK--IALSFFLWAKDQAHHSHDVVSYNLIIDILAKVRQFDV 135
Query: 115 AEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPS-ALTYQIIL 173
A + + M++ P+ + L+ G + A F M + + + + +L
Sbjct: 136 AWQFIIEMDQNSLEPTSTTFRILIRRSVSAGLTRQAVRAFDDMSCFVEKDADSDDFCYLL 195
Query: 174 KLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAER 233
+ K A ++F ++ K + + KM+ ++IY + K A +L M ER
Sbjct: 196 DTLSKYGYVKLASQIF----NQRKFKFEANAKMYTILIYGWCKINRVSIAERLLGEMVER 251
Query: 234 GVQQSTVTYNSLMS-------------FETNYKEVSKIYDQMQRAGLQPDVVSYALLINA 280
G++ + VTYN L++ FE ++ K+ D+M++ G++PDV SY+++I+
Sbjct: 252 GIEANVVTYNVLLNGICRRASLHPDDRFERTIRDAEKVLDEMRQKGIEPDVTSYSIVIHV 311
Query: 281 YGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPD 340
Y +A + E L M D G+ PT Y ++ G ++ A + M +D SP
Sbjct: 312 YSRAHKPELTLDKLRMMKDKGIWPTVATYTSVVKCLCSCGRLEDAEELVSDMVKDGVSPS 371
Query: 341 ICSYTTMLSAYVNASDMEGAEKFFRRLKQD-GFVPNVITYGTLIKGYAKVNNLEKMMEIY 399
+Y Y D + A + +R++K++ +P++ TY L+ + K+N +E + EI+
Sbjct: 372 AATYNCFFKEYRGRKDSDNALRLYRKMKEEYSCLPDMHTYNILVGMFVKLNRMEIVQEIW 431
Query: 400 DKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQ 446
D M+ +G P+ +T ++ + + + A ++ EM G+ P +
Sbjct: 432 DDMKTSGAGPDLDSYTLLIHGLCEKQKWKEACHFFVEMIEKGYLPQK 478
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/321 (20%), Positives = 133/321 (41%), Gaps = 12/321 (3%)
Query: 98 DFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRM 157
DF L+ K G A ++ + K + + +T L+ + + R AE + M
Sbjct: 190 DFCYLLDTLSKYGYVKLASQIFN-QRKFKFEANAKMYTILIYGWCKINRVSIAERLLGEM 248
Query: 158 QSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEK-------SPLKPDQKMFHMM 210
G + +TY ++L + T+ D EK ++PD + ++
Sbjct: 249 VERGIEANVVTYNVLLNGICRRASLHPDDRFERTIRDAEKVLDEMRQKGIEPDVTSYSIV 308
Query: 211 IYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETN---YKEVSKIYDQMQRAGL 267
I++Y +A E +M ++G+ + TY S++ + ++ ++ M + G+
Sbjct: 309 IHVYSRAHKPELTLDKLRMMKDKGIWPTVATYTSVVKCLCSCGRLEDAEELVSDMVKDGV 368
Query: 268 QPDVVSYALLINAYGKARREEEALAVFEEMLDA-GVRPTHKAYNILLDAFAISGMVDQAR 326
P +Y Y + + AL ++ +M + P YNIL+ F ++ +
Sbjct: 369 SPSAATYNCFFKEYRGRKDSDNALRLYRKMKEEYSCLPDMHTYNILVGMFVKLNRMEIVQ 428
Query: 327 TVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGY 386
++ M+ PD+ SYT ++ + A FF + + G++P IT+ TL +G
Sbjct: 429 EIWDDMKTSGAGPDLDSYTLLIHGLCEKQKWKEACHFFVEMIEKGYLPQKITFETLYRGL 488
Query: 387 AKVNNLEKMMEIYDKMRVNGI 407
+ + L+ + K+ I
Sbjct: 489 IQSDMLKTWRRLKKKLEEESI 509
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 59/294 (20%), Positives = 115/294 (39%), Gaps = 37/294 (12%)
Query: 166 ALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARK 225
++Y +I+ + + +F A + +++ +++ L+P F ++I AG +A +
Sbjct: 117 VVSYNLIIDILAKVRQFDVAWQF---IIEMDQNSLEPTSTTFRILIRRSVSAGLTRQAVR 173
Query: 226 LF---ALMAERGVQQSTVTYNSLMSFETNY---KEVSKIYDQMQRAGLQPDVVSYALLIN 279
F + E+ Y L+ + Y K S+I++Q ++ + + Y +LI
Sbjct: 174 AFDDMSCFVEKDADSDDFCY--LLDTLSKYGYVKLASQIFNQ-RKFKFEANAKMYTILIY 230
Query: 280 AYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSP 339
+ K R A + EM++ G+ YN+LL+ RR P
Sbjct: 231 GWCKINRVSIAERLLGEMVERGIEANVVTYNVLLNGIC---------------RRASLHP 275
Query: 340 DICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIY 399
D T+ AEK ++Q G P+V +Y +I Y++ + E ++
Sbjct: 276 DDRFERTI----------RDAEKVLDEMRQKGIEPDVTSYSIVIHVYSRAHKPELTLDKL 325
Query: 400 DKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILL 453
M+ GI P +T+++ + A +M G P N
Sbjct: 326 RMMKDKGIWPTVATYTSVVKCLCSCGRLEDAEELVSDMVKDGVSPSAATYNCFF 379
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 52/247 (21%), Positives = 97/247 (39%), Gaps = 45/247 (18%)
Query: 270 DVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVF 329
DVVSY L+I+ K R+ + A EM + PT + IL+ +G+ QA F
Sbjct: 116 DVVSYNLIIDILAKVRQFDVAWQFIIEMDQNSLEPTSTTFRILIRRSVSAGLTRQAVRAF 175
Query: 330 ---KC-MRRDRCSPDIC-------------------------------SYTTMLSAYVNA 354
C + +D S D C YT ++ +
Sbjct: 176 DDMSCFVEKDADSDDFCYLLDTLSKYGYVKLASQIFNQRKFKFEANAKMYTILIYGWCKI 235
Query: 355 SDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNL------EKMM----EIYDKMRV 404
+ + AE+ + + G NV+TY L+ G + +L E+ + ++ D+MR
Sbjct: 236 NRVSIAERLLGEMVERGIEANVVTYNVLLNGICRRASLHPDDRFERTIRDAEKVLDEMRQ 295
Query: 405 NGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNE 464
GI+P+ T ++ ++ Y + + + + M+ G P ++ + +
Sbjct: 296 KGIEPDVTSYSIVIHVYSRAHKPELTLDKLRMMKDKGIWPTVATYTSVVKCLCSCGRLED 355
Query: 465 ANELLGN 471
A EL+ +
Sbjct: 356 AEELVSD 362
>gi|449467657|ref|XP_004151539.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g16010-like [Cucumis sativus]
Length = 637
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 98/399 (24%), Positives = 184/399 (46%), Gaps = 42/399 (10%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
LI+A+GK ++ A ++ M + G P+ +T ++ Y + + + A + M+ G
Sbjct: 236 LISAFGKLERYDFAFRLFDEMKENGLHPTEKIYTTILAMYFKLNKVEAALRLVEEMKGKG 295
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
P+ TY ++K + + +A +F +L K KPD + + +I + +AG E
Sbjct: 296 CAPTVFTYTELIKGLGKVGRVDDAYSLFFNML---KDGCKPDVVLINNLINILGRAGRLE 352
Query: 222 KARKLFALMAERGVQQSTVTYNSLMS--FETNY--KEVSKIYDQMQRAGLQPDVVSYALL 277
A KLF M + VTYN+++ FE+ E + +++M+ G+ P +YA+L
Sbjct: 353 DALKLFGKMDSLQCAPNVVTYNTVIKAIFESKAPASEAALWFEKMKANGIAPSSFTYAIL 412
Query: 278 INAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDA---------------------- 315
I+ + K R E+AL + EEM + G P AY L+D+
Sbjct: 413 IDGFCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLIDSLGRAKRYEAANELFQELKENCG 472
Query: 316 -------------FAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEK 362
F G + A +F M++ CSPD+ +Y ++S + A ++ A
Sbjct: 473 RSSARVYAVMIKHFGNCGRLSDAVDLFCEMKKLGCSPDVYTYNALMSGMIRAGMIDEAHS 532
Query: 363 FFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYG 422
R ++++G P++ ++ ++ G AK ++ +E++ KM+ + I P+ + TI+
Sbjct: 533 LMRNMRENGCTPDIKSHNIILNGLAKTGGPKRAIEMFTKMKESEIMPDAVSYNTILSCLS 592
Query: 423 KNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADE 461
+ F+ A +EM+ GF D + +L DE
Sbjct: 593 RAGMFEMAAKLMREMKLKGFEYDSITYSSILEAVGKVDE 631
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 94/448 (20%), Positives = 195/448 (43%), Gaps = 41/448 (9%)
Query: 81 EVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEA 140
+ +W + + + ++ LI + G ++ + + M + + + +++
Sbjct: 109 QFFKWAGKRQHFQHDSTTYMALIRCLEESGLVDEMWRTIQDMIRSPCSVGPAEWSEILKI 168
Query: 141 YGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPL 200
G+ A ++F +++ P+A Y ++ + + ++ E++ + E
Sbjct: 169 LGKAKMVNKALSVFYQIKGRKCNPTATVYNTLILMLMHEGHHEKIHELYNEICSEGNC-- 226
Query: 201 KPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSL--MSFETNYKEVS-K 257
PD + +I + K Y+ A +LF M E G+ + Y ++ M F+ N E + +
Sbjct: 227 SPDTITYSALISAFGKLERYDFAFRLFDEMKENGLHPTEKIYTTILAMYFKLNKVEAALR 286
Query: 258 IYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFA 317
+ ++M+ G P V +Y LI GK R ++A ++F ML G +P N L++
Sbjct: 287 LVEEMKGKGCAPTVFTYTELIKGLGKVGRVDDAYSLFFNMLKDGCKPDVVLINNLINILG 346
Query: 318 ISGMVDQARTVFKCMRRDRCSPDICSYTTMLSA-YVNASDMEGAEKFFRRLKQDGFVPNV 376
+G ++ A +F M +C+P++ +Y T++ A + + + A +F ++K +G P+
Sbjct: 347 RAGRLEDALKLFGKMDSLQCAPNVVTYNTVIKAIFESKAPASEAALWFEKMKANGIAPSS 406
Query: 377 ITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSA------ 430
TY LI G+ K N +EK + + ++M G P + +++D+ G+ K +++A
Sbjct: 407 FTYAILIDGFCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLIDSLGRAKRYEAANELFQE 466
Query: 431 -----------------------------VVWYKEMESCGFPPDQKAKNILLSLAKTADE 461
V + EM+ G PD N L+S A
Sbjct: 467 LKENCGRSSARVYAVMIKHFGNCGRLSDAVDLFCEMKKLGCSPDVYTYNALMSGMIRAGM 526
Query: 462 RNEANELLGNFNHPNNEPGINGLSISVD 489
+EA+ L+ N P I +I ++
Sbjct: 527 IDEAHSLMRNMRENGCTPDIKSHNIILN 554
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 85/378 (22%), Positives = 155/378 (41%), Gaps = 38/378 (10%)
Query: 130 SVVSHTALMEAYGRGGRYKNAE-AIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEV 188
S+ S ++ + R K E I + + S P P A + K+ + +E
Sbjct: 5 SLASKRSISSLHPLSTRIKQTENEIVQMFRVSTPSPEASNFSFNRKVLRRDPSVRTLDER 64
Query: 189 FMTLL-------DEEKS----PLKPDQKMFHMM----------IYMYKKAGGYEKARKLF 227
F+ +L D EK+ LK D ++ H + I +K AG R+ F
Sbjct: 65 FIRILKIFKWGSDAEKAIEVLKLKVDHRLVHQVLDIDVEIRAKIQFFKWAG----KRQHF 120
Query: 228 ALMAERGVQQSTVTYNSLMSFETNYKEVSKIYDQMQRAGLQPDVVS---YALLINAYGKA 284
Q + TY +L+ V +++ +Q P V ++ ++ GKA
Sbjct: 121 --------QHDSTTYMALIRCLEESGLVDEMWRTIQDMIRSPCSVGPAEWSEILKILGKA 172
Query: 285 RREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVF-KCMRRDRCSPDICS 343
+ +AL+VF ++ PT YN L+ G ++ ++ + CSPD +
Sbjct: 173 KMVNKALSVFYQIKGRKCNPTATVYNTLILMLMHEGHHEKIHELYNEICSEGNCSPDTIT 232
Query: 344 YTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMR 403
Y+ ++SA+ + A + F +K++G P Y T++ Y K+N +E + + ++M+
Sbjct: 233 YSALISAFGKLERYDFAFRLFDEMKENGLHPTEKIYTTILAMYFKLNKVEAALRLVEEMK 292
Query: 404 VNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERN 463
G P +T ++ GK D A + M G PD N L+++ A
Sbjct: 293 GKGCAPTVFTYTELIKGLGKVGRVDDAYSLFFNMLKDGCKPDVVLINNLINILGRAGRLE 352
Query: 464 EANELLGNFNHPNNEPGI 481
+A +L G + P +
Sbjct: 353 DALKLFGKMDSLQCAPNV 370
>gi|356529513|ref|XP_003533335.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
mitochondrial-like [Glycine max]
Length = 794
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 110/437 (25%), Positives = 203/437 (46%), Gaps = 15/437 (3%)
Query: 40 EVGSAVAVLRSERTRGQPLPKDLVLGTLVRLKQLKKWNVVSEVLEWL--RIQSWWDFNEM 97
++ +VL RG P P + L TL++ LK V + L + + + N++
Sbjct: 357 QITFGFSVLAKILKRGYP-PSTVTLNTLIKGLCLKGQ--VKKALHFHDKLLAQGFQLNQV 413
Query: 98 DFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRM 157
+ LI K GD A K+L ++ + P+V ++ +++A + A +F M
Sbjct: 414 SYATLINGVCKIGDTRGAIKLLRKIDGRLTKPNVEMYSTIIDALCKYQLVSEAYGLFSEM 473
Query: 158 QSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEK-SPLKPDQKMFHMMIYMYKK 216
G +TY ++ F K KEA + LL+E + PD + + +++ K
Sbjct: 474 TVKGISADVVTYSTLIYGFCIVGKLKEA----IGLLNEMVLKTINPDVRTYTILVDALGK 529
Query: 217 AGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSK---IYDQMQRAGLQPDVVS 273
G ++A+ + A+M + V+ TYN+LM+ EV K +++ M G+ PDV +
Sbjct: 530 EGKVKEAKSVLAVMLKACVKPDVFTYNTLMNGYLLVYEVKKAQHVFNAMSLMGVTPDVHT 589
Query: 274 YALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMR 333
Y +LIN + K++ +EAL +F+EM + P Y+ L+D SG + + M
Sbjct: 590 YTILINGFCKSKMVDEALNLFKEMHQKNMVPDTVTYSSLVDGLCKSGRISYVWDLIDEM- 648
Query: 334 RDRCSP-DICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNL 392
RDR P D+ +Y +++ ++ A F ++K G PN T+ L+ G K L
Sbjct: 649 RDRGQPADVITYNSLIDGLCKNGHLDKAIALFNKMKDQGIRPNTFTFTILLDGLCKGGRL 708
Query: 393 EKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNIL 452
+ E++ + G + I+ ++ + K + A+ +ME G P+ +I+
Sbjct: 709 KDAQEVFQDLLTKGYHLDVYIYNVMIYGHCKQGLLEEALTMLSKMEENGCIPNAVTFDII 768
Query: 453 LSLAKTADERNEANELL 469
++ DE ++A +LL
Sbjct: 769 INALFKKDENDKAEKLL 785
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 97/395 (24%), Positives = 183/395 (46%), Gaps = 12/395 (3%)
Query: 63 VLGTLVRLKQLKKWNVVSEVLEWLRIQS-WWDFNEMDFLMLITAYGKQGDFNKAEKVLSF 121
+L + ++K +S LE IQ + N +LI + G VL+
Sbjct: 313 ILDSFAKMKHYSTAVSLSHRLELKGIQPDLFTLN-----ILINCFCHMGQITFGFSVLAK 367
Query: 122 MNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANK 181
+ K+GY PS V+ L++ G+ K A ++ + G + + ++Y ++ K
Sbjct: 368 ILKRGYPPSTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYATLIN---GVCK 424
Query: 182 FKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVT 241
+ L + KP+ +M+ +I K +A LF+ M +G+ VT
Sbjct: 425 IGDTRGAIKLLRKIDGRLTKPNVEMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVT 484
Query: 242 YNSLM---SFETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEML 298
Y++L+ KE + ++M + PDV +Y +L++A GK + +EA +V ML
Sbjct: 485 YSTLIYGFCIVGKLKEAIGLLNEMVLKTINPDVRTYTILVDALGKEGKVKEAKSVLAVML 544
Query: 299 DAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDME 358
A V+P YN L++ + + V +A+ VF M +PD+ +YT +++ + + ++
Sbjct: 545 KACVKPDVFTYNTLMNGYLLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKSKMVD 604
Query: 359 GAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIM 418
A F+ + Q VP+ +TY +L+ G K + + ++ D+MR G + + +++
Sbjct: 605 EALNLFKEMHQKNMVPDTVTYSSLVDGLCKSGRISYVWDLIDEMRDRGQPADVITYNSLI 664
Query: 419 DAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILL 453
D KN D A+ + +M+ G P+ ILL
Sbjct: 665 DGLCKNGHLDKAIALFNKMKDQGIRPNTFTFTILL 699
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 117/494 (23%), Positives = 211/494 (42%), Gaps = 47/494 (9%)
Query: 37 QIEEVGSAVA--VLRSERTRGQPLPKDLVLGTLVRLKQLKKWNVVSEVLEWL--RIQSWW 92
I+ V AV+ VL RG P P + L TL++ LK V E L + + +
Sbjct: 38 SIQNVDDAVSLSVLTKILKRGYP-PDTVTLNTLIKGLCLKGQ--VKEALHFHDKLLAQGF 94
Query: 93 DFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEA 152
N++ + LI + GD A K L ++ + P+V + +++A + A
Sbjct: 95 QLNQVSYATLINGVCRIGDTRAAIKFLRKIDGRLAKPNVEMYNTIIDALCKYQLVSEAYG 154
Query: 153 IFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIY 212
+F M G + +TY ++ F K KEA + ++ + + P+ +++++
Sbjct: 155 LFSEMTVKGISANVVTYSTLIYGFCIVGKLKEALGLLNVMVLKT---INPNVCTYNILVD 211
Query: 213 MYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSK---IYDQMQRAGLQP 269
K G ++A+ + A+M + V+ + +TY++LM EV K +++ M G+ P
Sbjct: 212 ALCKEGKVKEAKSVLAVMLKACVKSNVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTP 271
Query: 270 DVVSYALLINAYGKARREEEALAVFEEM--------------LDA--------------- 300
DV SY ++IN + K +R ++AL +F+EM LD+
Sbjct: 272 DVHSYNIMINGFCKIKRVDKALNLFKEMILSRFPPIIQFNKILDSFAKMKHYSTAVSLSH 331
Query: 301 -----GVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNAS 355
G++P NIL++ F G + +V + + P + T++
Sbjct: 332 RLELKGIQPDLFTLNILINCFCHMGQITFGFSVLAKILKRGYPPSTVTLNTLIKGLCLKG 391
Query: 356 DMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFT 415
++ A F +L GF N ++Y TLI G K+ + +++ K+ KPN +++
Sbjct: 392 QVKKALHFHDKLLAQGFQLNQVSYATLINGVCKIGDTRGAIKLLRKIDGRLTKPNVEMYS 451
Query: 416 TIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHP 475
TI+DA K + A + EM G D + L+ + EA LL
Sbjct: 452 TIIDALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIYGFCIVGKLKEAIGLLNEMVLK 511
Query: 476 NNEPGINGLSISVD 489
P + +I VD
Sbjct: 512 TINPDVRTYTILVD 525
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 95/393 (24%), Positives = 185/393 (47%), Gaps = 28/393 (7%)
Query: 30 NWRRLMNQIEEVGSAVAVLRSERTRGQPLPKDLVLGTLVRLKQLKKWNVVSEVLEWLRIQ 89
++ L+N + ++G ++ R L K V + L K+ +VSE
Sbjct: 414 SYATLINGVCKIGDTRGAIKLLRKIDGRLTKPNVEMYSTIIDALCKYQLVSE-------- 465
Query: 90 SWWDFNEMD----------FLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALME 139
++ F+EM + LI + G +A +L+ M K P V ++T L++
Sbjct: 466 AYGLFSEMTVKGISADVVTYSTLIYGFCIVGKLKEAIGLLNEMVLKTINPDVRTYTILVD 525
Query: 140 AYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVF--MTLLDEEK 197
A G+ G+ K A+++ M + +P TY ++ ++ + K+A+ VF M+L+
Sbjct: 526 ALGKEGKVKEAKSVLAVMLKACVKPDVFTYNTLMNGYLLVYEVKKAQHVFNAMSLMG--- 582
Query: 198 SPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSK 257
+ PD + ++I + K+ ++A LF M ++ + TVTY+SL+ +S
Sbjct: 583 --VTPDVHTYTILINGFCKSKMVDEALNLFKEMHQKNMVPDTVTYSSLVDGLCKSGRISY 640
Query: 258 IYD---QMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLD 314
++D +M+ G DV++Y LI+ K ++A+A+F +M D G+RP + ILLD
Sbjct: 641 VWDLIDEMRDRGQPADVITYNSLIDGLCKNGHLDKAIALFNKMKDQGIRPNTFTFTILLD 700
Query: 315 AFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVP 374
G + A+ VF+ + D+ Y M+ + +E A +++++G +P
Sbjct: 701 GLCKGGRLKDAQEVFQDLLTKGYHLDVYIYNVMIYGHCKQGLLEEALTMLSKMEENGCIP 760
Query: 375 NVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGI 407
N +T+ +I K + +K ++ +M G+
Sbjct: 761 NAVTFDIIINALFKKDENDKAEKLLRQMIARGL 793
Score = 118 bits (295), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 94/420 (22%), Positives = 171/420 (40%), Gaps = 69/420 (16%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + +L+ A K+G +A+ VL+ M K +V++++ LM+ Y K A+ +F
Sbjct: 202 NVCTYNILVDALCKEGKVKEAKSVLAVMLKACVKSNVITYSTLMDGYFLVYEVKKAQHVF 261
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPL-------------- 200
M G P +Y I++ F + + +A +F ++ P+
Sbjct: 262 NAMSLMGVTPDVHSYNIMINGFCKIKRVDKALNLFKEMILSRFPPIIQFNKILDSFAKMK 321
Query: 201 -----------------KPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYN 243
+PD +++I + G + A + +RG STVT N
Sbjct: 322 HYSTAVSLSHRLELKGIQPDLFTLNILINCFCHMGQITFGFSVLAKILKRGYPPSTVTLN 381
Query: 244 SL---MSFETNYKEVSKIYDQMQRAGLQPDVVSYALLIN--------------------- 279
+L + + K+ +D++ G Q + VSYA LIN
Sbjct: 382 TLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYATLINGVCKIGDTRGAIKLLRKIDGR 441
Query: 280 --------------AYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQA 325
A K + EA +F EM G+ Y+ L+ F I G + +A
Sbjct: 442 LTKPNVEMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIYGFCIVGKLKEA 501
Query: 326 RTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKG 385
+ M +PD+ +YT ++ A ++ A+ + + P+V TY TL+ G
Sbjct: 502 IGLLNEMVLKTINPDVRTYTILVDALGKEGKVKEAKSVLAVMLKACVKPDVFTYNTLMNG 561
Query: 386 YAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPD 445
Y V ++K +++ M + G+ P+ +T +++ + K+K D A+ +KEM PD
Sbjct: 562 YLLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKSKMVDEALNLFKEMHQKNMVPD 621
Score = 105 bits (261), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 67/278 (24%), Positives = 132/278 (47%), Gaps = 6/278 (2%)
Query: 99 FLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQ 158
+ +L+ A GK+G +A+ VL+ M K P V ++ LM Y K A+ +F M
Sbjct: 520 YTILVDALGKEGKVKEAKSVLAVMLKACVKPDVFTYNTLMNGYLLVYEVKKAQHVFNAMS 579
Query: 159 SSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAG 218
G P TY I++ F ++ EA +F + + + PD + ++ K+G
Sbjct: 580 LMGVTPDVHTYTILINGFCKSKMVDEALNLFK---EMHQKNMVPDTVTYSSLVDGLCKSG 636
Query: 219 GYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSK---IYDQMQRAGLQPDVVSYA 275
L M +RG +TYNSL+ + K ++++M+ G++P+ ++
Sbjct: 637 RISYVWDLIDEMRDRGQPADVITYNSLIDGLCKNGHLDKAIALFNKMKDQGIRPNTFTFT 696
Query: 276 LLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRD 335
+L++ K R ++A VF+++L G YN+++ G++++A T+ M +
Sbjct: 697 ILLDGLCKGGRLKDAQEVFQDLLTKGYHLDVYIYNVMIYGHCKQGLLEEALTMLSKMEEN 756
Query: 336 RCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFV 373
C P+ ++ +++A + + AEK R++ G +
Sbjct: 757 GCIPNAVTFDIIINALFKKDENDKAEKLLRQMIARGLL 794
>gi|222630089|gb|EEE62221.1| hypothetical protein OsJ_17008 [Oryza sativa Japonica Group]
Length = 584
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 97/382 (25%), Positives = 173/382 (45%), Gaps = 12/382 (3%)
Query: 103 ITAYGKQGDFNKAEKVLSFMNKKGYA-PSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
I A+ + G ++A K + G P V + L++A R ++ M+ +G
Sbjct: 40 IGAFARAGSADRALKTFYRASDLGCRDPGVRVYNHLLDALLRENMVGAVVPVYDNMRKAG 99
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDE-EKSPLKPDQKMFHMMIYMYKKAGGY 220
P+ TY ++++ + ++ A + +LDE + PD+ ++ K G
Sbjct: 100 VDPNVYTYNLLIRALCQNDRVDAARK----MLDEMSRKGCHPDEVSHGTIVSGMCKLGRV 155
Query: 221 EKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSKIYDQMQRAGLQPDVVSYALLINA 280
E+AR A VQ S + E EV + ++M + GLQP+VV+Y +++A
Sbjct: 156 EEARGFLAETVP--VQASYNAVVHALCGEFRMWEVFSVVNEMVQRGLQPNVVTYTTIVDA 213
Query: 281 YGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPD 340
+ KAR A A+ M+ G P + L+ F G V A +++ M + +P
Sbjct: 214 FCKARELRMACAILARMVSMGCTPNVLTFTALVKGFFEDGKVHDALSMWHWMVDEGWAPS 273
Query: 341 ICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYD 400
SY ++ D++GA FF +K++ +PN TY TL+ G++ +L+ M I++
Sbjct: 274 TISYNVLIRGLCCIGDLKGALDFFNSMKRNALLPNATTYSTLVDGFSNAGDLDGAMLIWN 333
Query: 401 KMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLS----LA 456
+M+ +G KPN ++T ++D K FD A +M PP+ N L+
Sbjct: 334 EMKSSGCKPNVVVYTNMIDVLCKKMMFDQAESLIDKMLMDNCPPNTVTFNTLIGRLCDCG 393
Query: 457 KTADERNEANELLGNFNHPNNE 478
+ N + + N HPN+
Sbjct: 394 RVGRALNVFHGMRRNGCHPNDR 415
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 90/350 (25%), Positives = 169/350 (48%), Gaps = 8/350 (2%)
Query: 110 GDFNKAE--KVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSAL 167
G+F E V++ M ++G P+VV++T +++A+ + + A AI RM S G P+ L
Sbjct: 181 GEFRMWEVFSVVNEMVQRGLQPNVVTYTTIVDAFCKARELRMACAILARMVSMGCTPNVL 240
Query: 168 TYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLF 227
T+ ++K F E K +A ++ ++DE +P ++++I G + A F
Sbjct: 241 TFTALVKGFFEDGKVHDALSMWHWMVDEGWAP---STISYNVLIRGLCCIGDLKGALDFF 297
Query: 228 ALMAERGVQQSTVTYNSLMSFETNYKEVSK---IYDQMQRAGLQPDVVSYALLINAYGKA 284
M + + TY++L+ +N ++ I+++M+ +G +P+VV Y +I+ K
Sbjct: 298 NSMKRNALLPNATTYSTLVDGFSNAGDLDGAMLIWNEMKSSGCKPNVVVYTNMIDVLCKK 357
Query: 285 RREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSY 344
++A ++ ++ML P +N L+ G V +A VF MRR+ C P+ +Y
Sbjct: 358 MMFDQAESLIDKMLMDNCPPNTVTFNTLIGRLCDCGRVGRALNVFHGMRRNGCHPNDRTY 417
Query: 345 TTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRV 404
+L + + A + +GF +++TY T+I ++ + M + +M V
Sbjct: 418 NELLHGLFREGNHKDAFAMVIEMLNNGFELSLVTYNTVINCLCQMCMRKHAMLLLGRMMV 477
Query: 405 NGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLS 454
GI+P+ F I+ AY K A +M + P + A IL+S
Sbjct: 478 QGIQPDAFTFNAIIHAYCKEGKVSIAACLLGQMNAVNCPRNVVAYTILIS 527
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 88/384 (22%), Positives = 157/384 (40%), Gaps = 17/384 (4%)
Query: 93 DFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEA 152
D N + +LI A + + A K+L M++KG P VSH ++ + GR + A
Sbjct: 101 DPNVYTYNLLIRALCQNDRVDAARKMLDEMSRKGCHPDEVSHGTIVSGMCKLGRVEEARG 160
Query: 153 IFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIY 212
+ P +Y ++ +F+ EVF + + + L+P+ + ++
Sbjct: 161 FL-----AETVPVQASYNAVVHAL--CGEFR-MWEVFSVVNEMVQRGLQPNVVTYTTIVD 212
Query: 213 MYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSKIYDQ------MQRAG 266
+ KA A + A M G + +T+ +L+ + E K++D M G
Sbjct: 213 AFCKARELRMACAILARMVSMGCTPNVLTFTALVK---GFFEDGKVHDALSMWHWMVDEG 269
Query: 267 LQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQAR 326
P +SY +LI + AL F M + P Y+ L+D F+ +G +D A
Sbjct: 270 WAPSTISYNVLIRGLCCIGDLKGALDFFNSMKRNALLPNATTYSTLVDGFSNAGDLDGAM 329
Query: 327 TVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGY 386
++ M+ C P++ YT M+ + AE ++ D PN +T+ TLI
Sbjct: 330 LIWNEMKSSGCKPNVVVYTNMIDVLCKKMMFDQAESLIDKMLMDNCPPNTVTFNTLIGRL 389
Query: 387 AKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQ 446
+ + + ++ MR NG PN + ++ + + A EM + GF
Sbjct: 390 CDCGRVGRALNVFHGMRRNGCHPNDRTYNELLHGLFREGNHKDAFAMVIEMLNNGFELSL 449
Query: 447 KAKNILLSLAKTADERNEANELLG 470
N +++ R A LLG
Sbjct: 450 VTYNTVINCLCQMCMRKHAMLLLG 473
Score = 105 bits (261), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 66/305 (21%), Positives = 134/305 (43%), Gaps = 7/305 (2%)
Query: 84 EWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGR 143
W+ + W + + + +LI GD A + M + P+ +++ L++ +
Sbjct: 263 HWM-VDEGWAPSTISYNVLIRGLCCIGDLKGALDFFNSMKRNALLPNATTYSTLVDGFSN 321
Query: 144 GGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPD 203
G A I+ M+SSG +P+ + Y ++ + + F +AE + +L + P P+
Sbjct: 322 AGDLDGAMLIWNEMKSSGCKPNVVVYTNMIDVLCKKMMFDQAESLIDKML-MDNCP--PN 378
Query: 204 QKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSF---ETNYKEVSKIYD 260
F+ +I G +A +F M G + TYN L+ E N+K+ +
Sbjct: 379 TVTFNTLIGRLCDCGRVGRALNVFHGMRRNGCHPNDRTYNELLHGLFREGNHKDAFAMVI 438
Query: 261 QMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISG 320
+M G + +V+Y +IN + + A+ + M+ G++P +N ++ A+ G
Sbjct: 439 EMLNNGFELSLVTYNTVINCLCQMCMRKHAMLLLGRMMVQGIQPDAFTFNAIIHAYCKEG 498
Query: 321 MVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYG 380
V A + M C ++ +YT ++S N + A + ++ +G PN T+
Sbjct: 499 KVSIAACLLGQMNAVNCPRNVVAYTILISELCNQGKLSNAMVYLLKMLYEGICPNEATWN 558
Query: 381 TLIKG 385
L++
Sbjct: 559 VLVRA 563
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 78/385 (20%), Positives = 159/385 (41%), Gaps = 8/385 (2%)
Query: 72 QLKKWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSV 131
+ + W V S V E +Q N + + ++ A+ K + A +L+ M G P+V
Sbjct: 182 EFRMWEVFSVVNE--MVQRGLQPNVVTYTTIVDAFCKARELRMACAILARMVSMGCTPNV 239
Query: 132 VSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMT 191
++ TAL++ + G+ +A +++ M G PS ++Y ++++ K A + F +
Sbjct: 240 LTFTALVKGFFEDGKVHDALSMWHWMVDEGWAPSTISYNVLIRGLCCIGDLKGALDFFNS 299
Query: 192 LLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETN 251
+ +++ L P+ + ++ + AG + A ++ M G + + V Y +++
Sbjct: 300 M---KRNALLPNATTYSTLVDGFSNAGDLDGAMLIWNEMKSSGCKPNVVVYTNMIDVLCK 356
Query: 252 ---YKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKA 308
+ + + D+M P+ V++ LI R AL VF M G P +
Sbjct: 357 KMMFDQAESLIDKMLMDNCPPNTVTFNTLIGRLCDCGRVGRALNVFHGMRRNGCHPNDRT 416
Query: 309 YNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLK 368
YN LL G A + M + + +Y T+++ + A R+
Sbjct: 417 YNELLHGLFREGNHKDAFAMVIEMLNNGFELSLVTYNTVINCLCQMCMRKHAMLLLGRMM 476
Query: 369 QDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFD 428
G P+ T+ +I Y K + + +M N +T ++
Sbjct: 477 VQGIQPDAFTFNAIIHAYCKEGKVSIAACLLGQMNAVNCPRNVVAYTILISELCNQGKLS 536
Query: 429 SAVVWYKEMESCGFPPDQKAKNILL 453
+A+V+ +M G P++ N+L+
Sbjct: 537 NAMVYLLKMLYEGICPNEATWNVLV 561
Score = 99.0 bits (245), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 79/334 (23%), Positives = 140/334 (41%), Gaps = 8/334 (2%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + F L+ + + G + A + +M +G+APS +S+ L+ G K A F
Sbjct: 238 NVLTFTALVKGFFEDGKVHDALSMWHWMVDEGWAPSTISYNVLIRGLCCIGDLKGALDFF 297
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSP-LKPDQKMFHMMIYM 213
M+ + P+A TY ++ F A A M + +E KS KP+ ++ MI +
Sbjct: 298 NSMKRNALLPNATTYSTLVDGFSNAGDLDGA----MLIWNEMKSSGCKPNVVVYTNMIDV 353
Query: 214 YKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSK---IYDQMQRAGLQPD 270
K +++A L M +TVT+N+L+ + V + ++ M+R G P+
Sbjct: 354 LCKKMMFDQAESLIDKMLMDNCPPNTVTFNTLIGRLCDCGRVGRALNVFHGMRRNGCHPN 413
Query: 271 VVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFK 330
+Y L++ + ++A A+ EML+ G + YN +++ M A +
Sbjct: 414 DRTYNELLHGLFREGNHKDAFAMVIEMLNNGFELSLVTYNTVINCLCQMCMRKHAMLLLG 473
Query: 331 CMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVN 390
M PD ++ ++ AY + A ++ NV+ Y LI
Sbjct: 474 RMMVQGIQPDAFTFNAIIHAYCKEGKVSIAACLLGQMNAVNCPRNVVAYTILISELCNQG 533
Query: 391 NLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKN 424
L M KM GI PN+ + ++ A N
Sbjct: 534 KLSNAMVYLLKMLYEGICPNEATWNVLVRAIFTN 567
>gi|449453087|ref|XP_004144290.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
gi|449522905|ref|XP_004168466.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
Length = 915
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 92/362 (25%), Positives = 168/362 (46%), Gaps = 6/362 (1%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + +LI + + +F+ A+K+L+ M +KG PSVV++ AL++ Y + G +A I
Sbjct: 343 NVHTYTVLICSLCEDSNFDDAKKILNGMLEKGLIPSVVTYNALIDGYCKKGLSASALEIL 402
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
M+S+ P+A TY ++ F +A + +L+ + L+P+ ++++I+
Sbjct: 403 SLMESNNCSPNARTYNELILGFCRGKNIHKAMSLLHKMLERK---LQPNVVTYNILIHGQ 459
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETN---YKEVSKIYDQMQRAGLQPDV 271
K G A KL +LM E G+ TY+ + +E +++ ++ G++ +
Sbjct: 460 CKEGDLGSAYKLLSLMNESGLVPDEWTYSVFIDTLCKRGLVEEARSLFESLKEKGIKANE 519
Query: 272 VSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKC 331
V Y+ LI+ Y K + + + ++ML AG P YN L+D + +AR +
Sbjct: 520 VIYSTLIDGYCKVGKVSDGRFLLDKMLSAGCVPNSITYNSLIDGYCKEKNFKEARLLVDI 579
Query: 332 MRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNN 391
M + P +YT ++ + + + A F ++ G P+V Y I Y
Sbjct: 580 MIKRDIEPAADTYTILIDNLLKDDEFDQAHDMFDQMLSTGSHPDVFIYTAFIHAYCSHGR 639
Query: 392 LEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNI 451
L+ + KM GI P+ ++T +DAYG+ D A K M G P +
Sbjct: 640 LKDAEVLICKMNAKGIMPDTMLYTLFIDAYGRFGSIDGAFGILKRMHEVGCEPSYYTYSC 699
Query: 452 LL 453
L+
Sbjct: 700 LI 701
Score = 142 bits (357), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 98/404 (24%), Positives = 179/404 (44%), Gaps = 6/404 (1%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
++ Y K G+ +AE +S + + G + ++T+L+ Y R A AIF M + G
Sbjct: 210 MVNGYCKLGNVVEAELYVSKIVQAGLSLDTFTYTSLILGYCRNKNVDAANAIFLSMPNKG 269
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
+ ++Y ++ F EA + EA ++F + ++ P + + ++I+ + G
Sbjct: 270 CLRNEVSYTNLIHGFCEARRVDEALKLFSQMHEDN---CWPTVRTYTVIIFALCQLGRKT 326
Query: 222 KARKLFALMAERGVQQSTVTYNSLMSF---ETNYKEVSKIYDQMQRAGLQPDVVSYALLI 278
+A +F M E+ Q + TY L+ ++N+ + KI + M GL P VV+Y LI
Sbjct: 327 EALNMFKEMTEKHCQPNVHTYTVLICSLCEDSNFDDAKKILNGMLEKGLIPSVVTYNALI 386
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCS 338
+ Y K AL + M P + YN L+ F + +A ++ M +
Sbjct: 387 DGYCKKGLSASALEILSLMESNNCSPNARTYNELILGFCRGKNIHKAMSLLHKMLERKLQ 446
Query: 339 PDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEI 398
P++ +Y ++ D+ A K + + G VP+ TY I K +E+ +
Sbjct: 447 PNVVTYNILIHGQCKEGDLGSAYKLLSLMNESGLVPDEWTYSVFIDTLCKRGLVEEARSL 506
Query: 399 YDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKT 458
++ ++ GIK N+ I++T++D Y K +M S G P+ N L+
Sbjct: 507 FESLKEKGIKANEVIYSTLIDGYCKVGKVSDGRFLLDKMLSAGCVPNSITYNSLIDGYCK 566
Query: 459 ADERNEANELLGNFNHPNNEPGINGLSISVDEEDDDDDDDEDDD 502
EA L+ + EP + +I +D DD+ D+ D
Sbjct: 567 EKNFKEARLLVDIMIKRDIEPAADTYTILIDNLLKDDEFDQAHD 610
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 91/354 (25%), Positives = 170/354 (48%), Gaps = 6/354 (1%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
NE+ + LI + + ++A K+ S M++ P+V ++T ++ A + GR A +F
Sbjct: 273 NEVSYTNLIHGFCEARRVDEALKLFSQMHEDNCWPTVRTYTVIIFALCQLGRKTEALNMF 332
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
+ M +P+ TY +++ E + F +A+++ +L++ L P ++ +I Y
Sbjct: 333 KEMTEKHCQPNVHTYTVLICSLCEDSNFDDAKKILNGMLEK---GLIPSVVTYNALIDGY 389
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSK---IYDQMQRAGLQPDV 271
K G A ++ +LM + TYN L+ K + K + +M LQP+V
Sbjct: 390 CKKGLSASALEILSLMESNNCSPNARTYNELILGFCRGKNIHKAMSLLHKMLERKLQPNV 449
Query: 272 VSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKC 331
V+Y +LI+ K A + M ++G+ P Y++ +D G+V++AR++F+
Sbjct: 450 VTYNILIHGQCKEGDLGSAYKLLSLMNESGLVPDEWTYSVFIDTLCKRGLVEEARSLFES 509
Query: 332 MRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNN 391
++ + Y+T++ Y + ++ G VPN ITY +LI GY K N
Sbjct: 510 LKEKGIKANEVIYSTLIDGYCKVGKVSDGRFLLDKMLSAGCVPNSITYNSLIDGYCKEKN 569
Query: 392 LEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPD 445
++ + D M I+P +T ++D K+ +FD A + +M S G PD
Sbjct: 570 FKEARLLVDIMIKRDIEPAADTYTILIDNLLKDDEFDQAHDMFDQMLSTGSHPD 623
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 105/427 (24%), Positives = 184/427 (43%), Gaps = 14/427 (3%)
Query: 59 PKDLVLGTLVRLKQLKKWNVVSEVLEWLRI-QSWWDFNEMDFLMLITAYGKQGDFNKAEK 117
P L T+V K NVV L +I Q+ + + LI Y + + + A
Sbjct: 202 PNIFTLNTMVN-GYCKLGNVVEAELYVSKIVQAGLSLDTFTYTSLILGYCRNKNVDAANA 260
Query: 118 VLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFV 177
+ M KG + VS+T L+ + R A +F +M P+ TY +I+
Sbjct: 261 IFLSMPNKGCLRNEVSYTNLIHGFCEARRVDEALKLFSQMHEDNCWPTVRTYTVIIFALC 320
Query: 178 EANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQ 237
+ + EA +F + ++ +P+ + ++I + ++ A+K+ M E+G+
Sbjct: 321 QLGRKTEALNMFKEMTEKH---CQPNVHTYTVLICSLCEDSNFDDAKKILNGMLEKGLIP 377
Query: 238 STVTYNSLMSFETNYKEVS----KIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAV 293
S VTYN+L+ K +S +I M+ P+ +Y LI + + + +A+++
Sbjct: 378 SVVTYNALIDGYCK-KGLSASALEILSLMESNNCSPNARTYNELILGFCRGKNIHKAMSL 436
Query: 294 FEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVN 353
+ML+ ++P YNIL+ G + A + M PD +Y+ +
Sbjct: 437 LHKMLERKLQPNVVTYNILIHGQCKEGDLGSAYKLLSLMNESGLVPDEWTYSVFIDTLCK 496
Query: 354 ASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTI 413
+E A F LK+ G N + Y TLI GY KV + + DKM G PN
Sbjct: 497 RGLVEEARSLFESLKEKGIKANEVIYSTLIDGYCKVGKVSDGRFLLDKMLSAGCVPNSIT 556
Query: 414 FTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEAN----ELL 469
+ +++D Y K K+F A + M P IL+ DE ++A+ ++L
Sbjct: 557 YNSLIDGYCKEKNFKEARLLVDIMIKRDIEPAADTYTILIDNLLKDDEFDQAHDMFDQML 616
Query: 470 GNFNHPN 476
+HP+
Sbjct: 617 STGSHPD 623
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 94/395 (23%), Positives = 169/395 (42%), Gaps = 38/395 (9%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + + +LI K+GD A K+LS MN+ G P +++ ++ + G + A ++F
Sbjct: 448 NVVTYNILIHGQCKEGDLGSAYKLLSLMNESGLVPDEWTYSVFIDTLCKRGLVEEARSLF 507
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSP-LKPDQKMFHMMIYM 213
++ G + + + Y ++ + + K + LLD+ S P+ ++ +I
Sbjct: 508 ESLKEKGIKANEVIYSTLIDGYCKVGKVSDGR----FLLDKMLSAGCVPNSITYNSLIDG 563
Query: 214 YKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSF---ETNYKEVSKIYDQMQRAGLQPD 270
Y K +++AR L +M +R ++ + TY L+ + + + ++DQM G PD
Sbjct: 564 YCKEKNFKEARLLVDIMIKRDIEPAADTYTILIDNLLKDDEFDQAHDMFDQMLSTGSHPD 623
Query: 271 VVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFK 330
V Y I+AY R ++A + +M G+ P Y + +DA+ G +D A + K
Sbjct: 624 VFIYTAFIHAYCSHGRLKDAEVLICKMNAKGIMPDTMLYTLFIDAYGRFGSIDGAFGILK 683
Query: 331 CMRRDRCSPDICSYTTMLSAYVNAS-----------------------------DMEGAE 361
M C P +Y+ ++ NA D E
Sbjct: 684 RMHEVGCEPSYYTYSCLIKHLSNAKPKEVSSSSELSDLSSGVASNDFSNCWRRVDYEFTL 743
Query: 362 KFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAY 421
F ++ + G PN TYG I G KV LE ++D M+ G PN+ I+ +++
Sbjct: 744 DLFGKMAEHGCAPNANTYGKFITGLCKVGCLEVAHRLFDHMKEKGQSPNEDIYNSLLGCS 803
Query: 422 GKNKDFDSAVVWYKEM-ESCGFPPDQKAKNILLSL 455
+ + A+ W M E+ P K +L L
Sbjct: 804 CQLGLYGEAIRWLDIMIENRHLPHLDSCKLLLCGL 838
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 98/405 (24%), Positives = 173/405 (42%), Gaps = 34/405 (8%)
Query: 116 EKVLSFMN----KKGYAPSVVSHTALMEAYGRGGRYKNAE---------------AIF-- 154
+ L+F N K G+ +V SH +++ G + AE A+F
Sbjct: 91 QTALAFFNWIGQKHGFKHNVQSHVSMLNILVPNGYLRIAENMRILMIKSTDSSENALFVL 150
Query: 155 -------RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMF 207
RR+ + + + Y ++L L E + V++ +LD+ + P+
Sbjct: 151 EMLRSMNRRVDAFKFKLTLRCYNMLLMLLSRFLMIDEMKSVYLEMLDDM---VTPNIFTL 207
Query: 208 HMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEV---SKIYDQMQR 264
+ M+ Y K G +A + + + G+ T TY SL+ K V + I+ M
Sbjct: 208 NTMVNGYCKLGNVVEAELYVSKIVQAGLSLDTFTYTSLILGYCRNKNVDAANAIFLSMPN 267
Query: 265 AGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQ 324
G + VSY LI+ + +ARR +EAL +F +M + PT + Y +++ A G +
Sbjct: 268 KGCLRNEVSYTNLIHGFCEARRVDEALKLFSQMHEDNCWPTVRTYTVIIFALCQLGRKTE 327
Query: 325 ARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIK 384
A +FK M C P++ +YT ++ + S+ + A+K + + G +P+V+TY LI
Sbjct: 328 ALNMFKEMTEKHCQPNVHTYTVLICSLCEDSNFDDAKKILNGMLEKGLIPSVVTYNALID 387
Query: 385 GYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPP 444
GY K +EI M N PN + ++ + + K+ A+ +M P
Sbjct: 388 GYCKKGLSASALEILSLMESNNCSPNARTYNELILGFCRGKNIHKAMSLLHKMLERKLQP 447
Query: 445 DQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGINGLSISVD 489
+ NIL+ + A +LL N P S+ +D
Sbjct: 448 NVVTYNILIHGQCKEGDLGSAYKLLSLMNESGLVPDEWTYSVFID 492
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/220 (21%), Positives = 100/220 (45%), Gaps = 7/220 (3%)
Query: 287 EEEALAVFEEM------LDA-GVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSP 339
E AL V E + +DA + T + YN+LL + M+D+ ++V+ M D +P
Sbjct: 143 SENALFVLEMLRSMNRRVDAFKFKLTLRCYNMLLMLLSRFLMIDEMKSVYLEMLDDMVTP 202
Query: 340 DICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIY 399
+I + TM++ Y ++ AE + ++ Q G + TY +LI GY + N++ I+
Sbjct: 203 NIFTLNTMVNGYCKLGNVVEAELYVSKIVQAGLSLDTFTYTSLILGYCRNKNVDAANAIF 262
Query: 400 DKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTA 459
M G N+ +T ++ + + + D A+ + +M P + +++
Sbjct: 263 LSMPNKGCLRNEVSYTNLIHGFCEARRVDEALKLFSQMHEDNCWPTVRTYTVIIFALCQL 322
Query: 460 DERNEANELLGNFNHPNNEPGINGLSISVDEEDDDDDDDE 499
+ EA + + +P ++ ++ + +D + D+
Sbjct: 323 GRKTEALNMFKEMTEKHCQPNVHTYTVLICSLCEDSNFDD 362
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 67/295 (22%), Positives = 114/295 (38%), Gaps = 12/295 (4%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
I AY G AE ++ MN KG P + +T ++AYGR G A I +RM G
Sbjct: 630 FIHAYCSHGRLKDAEVLICKMNAKGIMPDTMLYTLFIDAYGRFGSIDGAFGILKRMHEVG 689
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
PS TY ++K A K KE + + YE
Sbjct: 690 CEPSYYTYSCLIKHLSNA-KPKEVSSSSELSDLSSGVASNDFSNCW--------RRVDYE 740
Query: 222 KARKLFALMAERGVQQSTVTYNSLMS--FETNYKEVS-KIYDQMQRAGLQPDVVSYALLI 278
LF MAE G + TY ++ + EV+ +++D M+ G P+ Y L+
Sbjct: 741 FTLDLFGKMAEHGCAPNANTYGKFITGLCKVGCLEVAHRLFDHMKEKGQSPNEDIYNSLL 800
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCS 338
+ EA+ + M++ P + +LL G ++A+ VF + +
Sbjct: 801 GCSCQLGLYGEAIRWLDIMIENRHLPHLDSCKLLLCGLYDEGNDEKAKRVFCSFLQCEYN 860
Query: 339 PDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLE 393
D + ++ + + F ++ G + TY LI+G+ + ++
Sbjct: 861 YDEMVWKVLIDGLLKKGLSDKCSDLFGIMETQGCQIHPKTYSMLIEGFDGIQEID 915
>gi|356523400|ref|XP_003530328.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g48810-like [Glycine max]
Length = 664
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 109/451 (24%), Positives = 201/451 (44%), Gaps = 45/451 (9%)
Query: 57 PLPKDLVLGTLVRLKQLKKWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAE 116
PL +++ L R +L + + ++ RI D F+ ++ +Y G ++A
Sbjct: 73 PLTYHVMIEKLGRNSELDALHYILHQMKIERIPCSQD----SFICVLNSYKNSGLGDRAL 128
Query: 117 KVLSFMNKKGYAPSVVSHTALMEAY--GRGGRYKNAEAIFRRMQSSGPRPSALTYQIILK 174
K+ + + G P+V + L++A G ++ A++ M+ G P+ TY ++LK
Sbjct: 129 KMFYRIKEFGCKPTVKIYNHLLDALLGESGNKFHMIGAVYENMRGEGMEPNVFTYNVLLK 188
Query: 175 LFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERG 234
+ K A ++ L++ K PD + ++ + G E+AR++ G
Sbjct: 189 ALCKNGKLDGACKL---LVEMSKRGCVPDGVSYTTVVAAMCEDGRVEEAREVARRFGAEG 245
Query: 235 VQQSTVTYNSLMSFETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVF 294
V + E EV + D+M G+ P+VVSY+ +I+ E ALAV
Sbjct: 246 VVSVCNALICGLCREGRVGEVFGLMDEMVGNGVDPNVVSYSSVISWLSDVGEVELALAVL 305
Query: 295 EEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNA 354
+M+ G RP ++ L+ + + G V + +++ M + P++ Y T+L+ +
Sbjct: 306 GKMIRRGCRPNVHTFSSLMKGYFLGGRVGEGVGLWRVMVLEGVRPNVVVYNTLLNGLCCS 365
Query: 355 SDMEGAEKFFRRLKQDGFV-PNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTI 413
++ A R+++D F PNV TY TL+ G+ K +L+ E+++KM G++PN +
Sbjct: 366 GNLAEAVDVCGRMEKDCFCRPNVTTYSTLVHGFVKAGDLQGASEVWNKMVNCGVRPNVVV 425
Query: 414 FTTIMDAYGKNKDFDSA-------------------------------VVW----YKEME 438
+T+++D KN FD A V+W +M+
Sbjct: 426 YTSMVDVLCKNSMFDQAYRLIDNMATDGCPPTVVTFNTFIKGLCCGGRVLWAMRVVDQMQ 485
Query: 439 SCGFPPDQKAKNILLSLAKTADERNEANELL 469
G PD + N LL + +E EA EL+
Sbjct: 486 RYGCLPDTRTYNELLDGLFSVNELKEACELI 516
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 77/339 (22%), Positives = 151/339 (44%), Gaps = 34/339 (10%)
Query: 93 DFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEA 152
D N + + +I+ G+ A VL M ++G P+V + ++LM+ Y GGR
Sbjct: 279 DPNVVSYSSVISWLSDVGEVELALAVLGKMIRRGCRPNVHTFSSLMKGYFLGGRVGEGVG 338
Query: 153 IFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIY 212
++R M G RP+ + Y +L + EA +V + E+ +P+ + +++
Sbjct: 339 LWRVMVLEGVRPNVVVYNTLLNGLCCSGNLAEAVDVCGRM--EKDCFCRPNVTTYSTLVH 396
Query: 213 MYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSKIYDQMQRAGLQPDVV 272
+ KAG + A S+++++M G++P+VV
Sbjct: 397 GFVKAGDLQGA--------------------------------SEVWNKMVNCGVRPNVV 424
Query: 273 SYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCM 332
Y +++ K ++A + + M G PT +N + G V A V M
Sbjct: 425 VYTSMVDVLCKNSMFDQAYRLIDNMATDGCPPTVVTFNTFIKGLCCGGRVLWAMRVVDQM 484
Query: 333 RRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNL 392
+R C PD +Y +L + ++++ A + R L++ N++TY T++ G++
Sbjct: 485 QRYGCLPDTRTYNELLDGLFSVNELKEACELIRELEERKVELNLVTYNTVMYGFSSHGKE 544
Query: 393 EKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAV 431
E ++++ +M VNG+KP+ ++ AY K +A+
Sbjct: 545 EWVLQVLGRMLVNGVKPDAITVNVVIYAYSKLGKVRTAI 583
Score = 116 bits (290), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 89/415 (21%), Positives = 180/415 (43%), Gaps = 40/415 (9%)
Query: 75 KWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSH 134
K++++ V E +R + + N + +L+ A K G + A K+L M+K+G P VS+
Sbjct: 160 KFHMIGAVYENMRGEGM-EPNVFTYNVLLKALCKNGKLDGACKLLVEMSKRGCVPDGVSY 218
Query: 135 TALMEAYGRGGRYKNAEAIFRR--------------------------------MQSSGP 162
T ++ A GR + A + RR M +G
Sbjct: 219 TTVVAAMCEDGRVEEAREVARRFGAEGVVSVCNALICGLCREGRVGEVFGLMDEMVGNGV 278
Query: 163 RPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEK 222
P+ ++Y ++ + + + A V ++ + +P+ F ++ Y G +
Sbjct: 279 DPNVVSYSSVISWLSDVGEVELALAVLGKMI---RRGCRPNVHTFSSLMKGYFLGGRVGE 335
Query: 223 ARKLFALMAERGVQQSTVTYNSLM---SFETNYKEVSKIYDQMQR-AGLQPDVVSYALLI 278
L+ +M GV+ + V YN+L+ N E + +M++ +P+V +Y+ L+
Sbjct: 336 GVGLWRVMVLEGVRPNVVVYNTLLNGLCCSGNLAEAVDVCGRMEKDCFCRPNVTTYSTLV 395
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCS 338
+ + KA + A V+ +M++ GVRP Y ++D + M DQA + M D C
Sbjct: 396 HGFVKAGDLQGASEVWNKMVNCGVRPNVVVYTSMVDVLCKNSMFDQAYRLIDNMATDGCP 455
Query: 339 PDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEI 398
P + ++ T + + A + ++++ G +P+ TY L+ G VN L++ E+
Sbjct: 456 PTVVTFNTFIKGLCCGGRVLWAMRVVDQMQRYGCLPDTRTYNELLDGLFSVNELKEACEL 515
Query: 399 YDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILL 453
++ ++ N + T+M + + + + M G PD N+++
Sbjct: 516 IRELEERKVELNLVTYNTVMYGFSSHGKEEWVLQVLGRMLVNGVKPDAITVNVVI 570
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 74/315 (23%), Positives = 132/315 (41%), Gaps = 48/315 (15%)
Query: 207 FHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVS------KIYD 260
+H+MI +K G + L ++ + +++ + +S + +YK K++
Sbjct: 76 YHVMI---EKLGRNSELDALHYILHQMKIERIPCSQDSFICVLNSYKNSGLGDRALKMFY 132
Query: 261 QMQRAGLQPDVVSYALLINAY-GKARREEEAL-AVFEEMLDAGVRPTHKAYNILLDAFAI 318
+++ G +P V Y L++A G++ + + AV+E M G+ P YN+LL A
Sbjct: 133 RIKEFGCKPTVKIYNHLLDALLGESGNKFHMIGAVYENMRGEGMEPNVFTYNVLLKALCK 192
Query: 319 SGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFV----- 373
+G +D A + M + C PD SYTT+++A +E A + RR +G V
Sbjct: 193 NGKLDGACKLLVEMSKRGCVPDGVSYTTVVAAMCEDGRVEEAREVARRFGAEGVVSVCNA 252
Query: 374 ---------------------------PNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNG 406
PNV++Y ++I + V +E + + KM G
Sbjct: 253 LICGLCREGRVGEVFGLMDEMVGNGVDPNVVSYSSVISWLSDVGEVELALAVLGKMIRRG 312
Query: 407 IKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEAN 466
+PN F+++M Y V ++ M G P+ N LL+ + EA
Sbjct: 313 CRPNVHTFSSLMKGYFLGGRVGEGVGLWRVMVLEGVRPNVVVYNTLLNGLCCSGNLAEAV 372
Query: 467 ELLGN-----FNHPN 476
++ G F PN
Sbjct: 373 DVCGRMEKDCFCRPN 387
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 92/208 (44%), Gaps = 13/208 (6%)
Query: 267 LQPDVVSYALLINAY-GKARREEE----ALAVFEEMLDA-GVRPTHKAYNILLDAFAISG 320
L P S +LL ++ A R E AL F+ + + + T Y+++++ +
Sbjct: 28 LNPPPSSASLLHESHVAHALRREPNVLYALQHFQYLTNTLAFKHTPLTYHVMIEKLGRNS 87
Query: 321 MVDQARTVFKCMRRDR--CSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVIT 378
+D + M+ +R CS D S+ +L++Y N+ + A K F R+K+ G P V
Sbjct: 88 ELDALHYILHQMKIERIPCSQD--SFICVLNSYKNSGLGDRALKMFYRIKEFGCKPTVKI 145
Query: 379 YGTLIKGYA--KVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKE 436
Y L+ N + +Y+ MR G++PN + ++ A KN D A E
Sbjct: 146 YNHLLDALLGESGNKFHMIGAVYENMRGEGMEPNVFTYNVLLKALCKNGKLDGACKLLVE 205
Query: 437 MESCGFPPDQKAKNILLSLAKTADERNE 464
M G PD + +++ A D R E
Sbjct: 206 MSKRGCVPDGVSYTTVVA-AMCEDGRVE 232
>gi|414882142|tpg|DAA59273.1| TPA: hypothetical protein ZEAMMB73_713491 [Zea mays]
Length = 987
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 107/404 (26%), Positives = 178/404 (44%), Gaps = 38/404 (9%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
+I AY K+G A + + + G + AL+ Y R + A + M G
Sbjct: 185 MIMAYCKKGSLAIAHRYFCLLRESGMQMDTYTCNALLLGYCRTSDLRKACWLLMMMPLMG 244
Query: 162 PRPSALTYQIILKLFVEANKFKEAEE-VFMT----------------------------- 191
R + +Y I+++ EA +EA VFM
Sbjct: 245 CRRNEYSYTILIQGLCEARCVREALVLVFMMVHDGCSLNLHTYTLLIKGLCKEGRIHDAR 304
Query: 192 -LLDEEKSPLK---PDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMS 247
LLDE PL+ P ++ MI Y K+G + A + ALM + G TYNSL+
Sbjct: 305 GLLDE--MPLRGVVPSVWTYNAMIDGYCKSGRMKDALGIKALMEQNGCNPDDWTYNSLIY 362
Query: 248 FETNYK--EVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPT 305
K E ++ + G P V+++ LIN Y KA R ++AL V M+ + +
Sbjct: 363 GLCGGKLDEAEELLNGAIARGFTPTVITFTNLINGYCKAERIDDALRVKSNMISSNCKLD 422
Query: 306 HKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFR 365
+AY +L++ + +A+ M + +P++ +YT+++ Y + A + F+
Sbjct: 423 LQAYGVLINVLIKKCRLKEAKETLNEMFANGLAPNVVTYTSIIDGYCKVGMVGAALEVFK 482
Query: 366 RLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNK 425
++ +G PN TYG+LI G + L K M + KM+ +GI P +TT++ K
Sbjct: 483 LMEHEGCHPNAWTYGSLIYGLIQDKKLHKAMALITKMQEDGITPGVITYTTLIQGQCKKH 542
Query: 426 DFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELL 469
+FD+A ++ ME G PD++A N+L + EA L
Sbjct: 543 EFDNAFRLFEMMEQNGLTPDEQAYNVLTDALCKSGRAEEAYSFL 586
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 100/401 (24%), Positives = 183/401 (45%), Gaps = 15/401 (3%)
Query: 92 WDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAE 151
W +N + + + G ++AE++L+ +G+ P+V++ T L+ Y + R +A
Sbjct: 355 WTYNSLIYGLC------GGKLDEAEELLNGAIARGFTPTVITFTNLINGYCKAERIDDAL 408
Query: 152 AIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMI 211
+ M SS + Y +++ + ++ + KEA+E TL + + L P+ + +I
Sbjct: 409 RVKSNMISSNCKLDLQAYGVLINVLIKKCRLKEAKE---TLNEMFANGLAPNVVTYTSII 465
Query: 212 YMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSK---IYDQMQRAGLQ 268
Y K G A ++F LM G + TY SL+ K++ K + +MQ G+
Sbjct: 466 DGYCKVGMVGAALEVFKLMEHEGCHPNAWTYGSLIYGLIQDKKLHKAMALITKMQEDGIT 525
Query: 269 PDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTV 328
P V++Y LI K + A +FE M G+ P +AYN+L DA SG ++A +
Sbjct: 526 PGVITYTTLIQGQCKKHEFDNAFRLFEMMEQNGLTPDEQAYNVLTDALCKSGRAEEAYSF 585
Query: 329 FKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAK 388
+R+ + +YT+++ + A + + A ++ +G ++ TY L++ K
Sbjct: 586 L--VRKGVVLTKV-TYTSLVDGFSKAGNTDFAAVLIEKMVNEGCKADLYTYSVLLQALCK 642
Query: 389 VNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKA 448
L + + I D+M V+G+K N +T I+ K D A + EM S G P
Sbjct: 643 QKKLNEALSILDQMTVSGVKCNIVAYTIIISEMIKEGKHDHAKSLFNEMISSGHKPSATT 702
Query: 449 KNILLSLAKTADERNEANELLGNFNHPNNEPGINGLSISVD 489
+ +S EA L+G P + +I ++
Sbjct: 703 YTVFISSYCKIGRIEEAEHLIGEMERDGVTPDVVTYNIFIN 743
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 96/389 (24%), Positives = 178/389 (45%), Gaps = 35/389 (8%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
+E + +L A K G +AE+ SF+ +KG + V++T+L++ + + G A +
Sbjct: 562 DEQAYNVLTDALCKSG---RAEEAYSFLVRKGVVLTKVTYTSLVDGFSKAGNTDFAAVLI 618
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEK-SPLKPDQKMFHMMIYM 213
+M + G + TY ++L+ + K EA +++LD+ S +K + + ++I
Sbjct: 619 EKMVNEGCKADLYTYSVLLQALCKQKKLNEA----LSILDQMTVSGVKCNIVAYTIIISE 674
Query: 214 YKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNY---KEVSKIYDQMQRAGLQPD 270
K G ++ A+ LF M G + S TY +S +E + +M+R G+ PD
Sbjct: 675 MIKEGKHDHAKSLFNEMISSGHKPSATTYTVFISSYCKIGRIEEAEHLIGEMERDGVTPD 734
Query: 271 VVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFK 330
VV+Y + IN G + A + + M+DA P Y +LL F +++
Sbjct: 735 VVTYNIFINGCGHMGYIDRAFSTLKRMVDASCEPNCWTYWLLLKHFLKMSLIN------- 787
Query: 331 CMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVN 390
++ S N ++ + R+ + G P V+TY ++I G+ K
Sbjct: 788 ------------AHYVDTSGMWNWIELNMVWQLLERMMKHGLNPTVVTYSSIIAGFCKAT 835
Query: 391 NLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKN 450
LE+ + D M I PN+ I+T ++ K F AV + +M GF P ++ +
Sbjct: 836 RLEEACVLLDHMLGKDISPNEEIYTMLIKCCCDIKLFGKAVSFVTDMIEFGFQPQLESYH 895
Query: 451 -ILLSLAKTAD---ERNEANELLG-NFNH 474
+++ L D ++ +LLG ++NH
Sbjct: 896 YLIVGLCDEGDYDRAKSLFCDLLGMDYNH 924
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 95/440 (21%), Positives = 186/440 (42%), Gaps = 39/440 (8%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
NE + +LI + +A ++ M G + ++ ++T L++ + GR +A +
Sbjct: 248 NEYSYTILIQGLCEARCVREALVLVFMMVHDGCSLNLHTYTLLIKGLCKEGRIHDARGLL 307
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
M G PS TY ++ + ++ + K+A + + E++ PD ++ +IY
Sbjct: 308 DEMPLRGVVPSVWTYNAMIDGYCKSGRMKDALGIKALM---EQNGCNPDDWTYNSLIYGL 364
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVS---KIYDQMQRAGLQPDV 271
G ++A +L RG + +T+ +L++ + + ++ M + + D+
Sbjct: 365 -CGGKLDEAEELLNGAIARGFTPTVITFTNLINGYCKAERIDDALRVKSNMISSNCKLDL 423
Query: 272 VSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKC 331
+Y +LIN K R +EA EM G+ P Y ++D + GMV A VFK
Sbjct: 424 QAYGVLINVLIKKCRLKEAKETLNEMFANGLAPNVVTYTSIIDGYCKVGMVGAALEVFKL 483
Query: 332 MRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNN 391
M + C P+ +Y +++ + + A ++++DG P VITY TLI+G K +
Sbjct: 484 MEHEGCHPNAWTYGSLIYGLIQDKKLHKAMALITKMQEDGITPGVITYTTLIQGQCKKHE 543
Query: 392 LEKMMEIYDKMRVNGIKPNQ--------------------------------TIFTTIMD 419
+ +++ M NG+ P++ +T+++D
Sbjct: 544 FDNAFRLFEMMEQNGLTPDEQAYNVLTDALCKSGRAEEAYSFLVRKGVVLTKVTYTSLVD 603
Query: 420 AYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEP 479
+ K + D A V ++M + G D ++LL + NEA +L +
Sbjct: 604 GFSKAGNTDFAAVLIEKMVNEGCKADLYTYSVLLQALCKQKKLNEALSILDQMTVSGVKC 663
Query: 480 GINGLSISVDEEDDDDDDDE 499
I +I + E + D
Sbjct: 664 NIVAYTIIISEMIKEGKHDH 683
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 78/353 (22%), Positives = 156/353 (44%), Gaps = 3/353 (0%)
Query: 101 MLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSS 160
+LI K+ +A++ L+ M G AP+VV++T++++ Y + G A +F+ M+
Sbjct: 428 VLINVLIKKCRLKEAKETLNEMFANGLAPNVVTYTSIIDGYCKVGMVGAALEVFKLMEHE 487
Query: 161 GPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGY 220
G P+A TY ++ ++ K +A + + ++ + P + +I K +
Sbjct: 488 GCHPNAWTYGSLIYGLIQDKKLHKAMALITKM---QEDGITPGVITYTTLIQGQCKKHEF 544
Query: 221 EKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSKIYDQMQRAGLQPDVVSYALLINA 280
+ A +LF +M + G+ YN L + Y + R G+ V+Y L++
Sbjct: 545 DNAFRLFEMMEQNGLTPDEQAYNVLTDALCKSGRAEEAYSFLVRKGVVLTKVTYTSLVDG 604
Query: 281 YGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPD 340
+ KA + A + E+M++ G + Y++LL A +++A ++ M +
Sbjct: 605 FSKAGNTDFAAVLIEKMVNEGCKADLYTYSVLLQALCKQKKLNEALSILDQMTVSGVKCN 664
Query: 341 ICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYD 400
I +YT ++S + + A+ F + G P+ TY I Y K+ +E+ +
Sbjct: 665 IVAYTIIISEMIKEGKHDHAKSLFNEMISSGHKPSATTYTVFISSYCKIGRIEEAEHLIG 724
Query: 401 KMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILL 453
+M +G+ P+ + ++ G D A K M P+ +LL
Sbjct: 725 EMERDGVTPDVVTYNIFINGCGHMGYIDRAFSTLKRMVDASCEPNCWTYWLLL 777
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 72/284 (25%), Positives = 120/284 (42%), Gaps = 8/284 (2%)
Query: 200 LKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLM---SFETNYKEVS 256
L PD ++ MI Y K G A + F L+ E G+Q T T N+L+ ++ ++
Sbjct: 175 LLPDTVTYNTMIMAYCKKGSLAIAHRYFCLLRESGMQMDTYTCNALLLGYCRTSDLRKAC 234
Query: 257 KIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAF 316
+ M G + + SY +LI +AR EAL + M+ G Y +L+
Sbjct: 235 WLLMMMPLMGCRRNEYSYTILIQGLCEARCVREALVLVFMMVHDGCSLNLHTYTLLIKGL 294
Query: 317 AISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNV 376
G + AR + M P + +Y M+ Y + M+ A ++Q+G P+
Sbjct: 295 CKEGRIHDARGLLDEMPLRGVVPSVWTYNAMIDGYCKSGRMKDALGIKALMEQNGCNPDD 354
Query: 377 ITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKE 436
TY +LI G L++ E+ + G P FT +++ Y K + D A+
Sbjct: 355 WTYNSLIYGLCG-GKLDEAEELLNGAIARGFTPTVITFTNLINGYCKAERIDDALRVKSN 413
Query: 437 MESCGFPPDQKAK----NILLSLAKTADERNEANELLGNFNHPN 476
M S D +A N+L+ + + + NE+ N PN
Sbjct: 414 MISSNCKLDLQAYGVLINVLIKKCRLKEAKETLNEMFANGLAPN 457
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 72/333 (21%), Positives = 144/333 (43%), Gaps = 20/333 (6%)
Query: 70 LKQLKKWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAP 129
L + KK N +L+ + + S N + + ++I+ K+G + A+ + + M G+ P
Sbjct: 640 LCKQKKLNEALSILDQMTV-SGVKCNIVAYTIIISEMIKEGKHDHAKSLFNEMISSGHKP 698
Query: 130 SVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVF 189
S ++T + +Y + GR + AE + M+ G P +TY I + + F
Sbjct: 699 SATTYTVFISSYCKIGRIEEAEHLIGEMERDGVTPDVVTYNIFIN---GCGHMGYIDRAF 755
Query: 190 MTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFE 249
TL + +P+ + +++ + K +L+ V S + +N + E
Sbjct: 756 STLKRMVDASCEPNCWTYWLLLKHFLK----------MSLINAHYVDTSGM-WNWI---E 801
Query: 250 TNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAY 309
N V ++ ++M + GL P VV+Y+ +I + KA R EEA + + ML + P + Y
Sbjct: 802 LNM--VWQLLERMMKHGLNPTVVTYSSIIAGFCKATRLEEACVLLDHMLGKDISPNEEIY 859
Query: 310 NILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQ 369
+L+ + +A + M P + SY ++ + D + A+ F L
Sbjct: 860 TMLIKCCCDIKLFGKAVSFVTDMIEFGFQPQLESYHYLIVGLCDEGDYDRAKSLFCDLLG 919
Query: 370 DGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKM 402
+ N + + L G K +++ ++ M
Sbjct: 920 MDYNHNEVAWKILNDGLLKAGHVDFCSQLLAAM 952
Score = 72.0 bits (175), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 76/296 (25%), Positives = 125/296 (42%), Gaps = 18/296 (6%)
Query: 185 AEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLF-ALMAERGVQ-----QS 238
+ + LL ++P D+ +++ M +G E R+ A+ A R V S
Sbjct: 88 SHAALLQLLARRRAPANYDK----LVLSMISCSGTAEDVREAVDAIQAIRRVGGKRLVLS 143
Query: 239 TVTYN----SLMSFE-TNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAV 293
YN SL+ F+ T Y + K+Y + + GL PD V+Y +I AY K A
Sbjct: 144 PKCYNLALRSLLRFDMTEY--MGKLYSHLVQEGLLPDTVTYNTMIMAYCKKGSLAIAHRY 201
Query: 294 FEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVN 353
F + ++G++ N LL + + + +A + M C + SYT ++
Sbjct: 202 FCLLRESGMQMDTYTCNALLLGYCRTSDLRKACWLLMMMPLMGCRRNEYSYTILIQGLCE 261
Query: 354 ASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTI 413
A + A + DG N+ TY LIKG K + + D+M + G+ P+
Sbjct: 262 ARCVREALVLVFMMVHDGCSLNLHTYTLLIKGLCKEGRIHDARGLLDEMPLRGVVPSVWT 321
Query: 414 FTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELL 469
+ ++D Y K+ A+ ME G PD N L+ + +EA ELL
Sbjct: 322 YNAMIDGYCKSGRMKDALGIKALMEQNGCNPDDWTYNSLI-YGLCGGKLDEAEELL 376
>gi|242095042|ref|XP_002438011.1| hypothetical protein SORBIDRAFT_10g006490 [Sorghum bicolor]
gi|241916234|gb|EER89378.1| hypothetical protein SORBIDRAFT_10g006490 [Sorghum bicolor]
Length = 1443
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 111/434 (25%), Positives = 195/434 (44%), Gaps = 57/434 (13%)
Query: 27 GKKNWRRLMNQIEEVGSAVAVLRSERTRGQPLPKDLVLGTLVRLKQLKKWNVVSEVLEWL 86
G+ +WRR ++ E + + A + R +VLG L R +Q ++ EV +L
Sbjct: 166 GESSWRRALDAFEWLARSTA--PASRAVA------VVLGVLGRARQ---DSIAEEV--FL 212
Query: 87 RIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGR 146
R ++ F ++ Y + G F+ A ++L M+ +G P +VS L+ A + G
Sbjct: 213 RFAGEGATVQV-FNAMMGVYARSGRFDDARQLLDTMHDRGIDPDLVSFNTLINARSKSGC 271
Query: 147 YKNAEAI--FRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQ 204
A+ ++ SG RP +TY ++ +++ ++A VF ++ E +PD
Sbjct: 272 LAAGVALDLLFEVRQSGLRPDVITYNTLISACSQSSNLEDAVTVFEEMIASE---CRPDL 328
Query: 205 KMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLM----------SFETNYKE 254
++ M+ ++ + G E+A +LF + E+G VTYNSL+ E +E
Sbjct: 329 WTYNAMVSVHGRCGKAEEAERLFGELVEKGFMPDAVTYNSLLYAFAKEGNVDKVEHTCEE 388
Query: 255 VSK----------------------------IYDQMQRAGLQPDVVSYALLINAYGKARR 286
+ K +YD+M+ G PD V+Y ++I++ GK +
Sbjct: 389 LVKAGFKKNEITYNTMIHMYGKMGRLDLAVGLYDEMRAVGCTPDAVTYTVMIDSLGKMDK 448
Query: 287 EEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTT 346
EA V E+M DAG++PT A++ L+ A+A G A F CM PD +Y
Sbjct: 449 IAEAGKVLEDMADAGLKPTLVAFSALICAYAKGGRRADAEKTFDCMIASGVKPDRLAYLV 508
Query: 347 MLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNG 406
ML + + + E + +R + D + P+ Y L+ AK + E++ EI M +
Sbjct: 509 MLDVFARSGETEKMLRLYRTMMNDNYRPDDDMYQVLLVALAKEDKCEEIEEIIQDMELLC 568
Query: 407 IKPNQTIFTTIMDA 420
I T ++ A
Sbjct: 569 QMSLGVISTILIKA 582
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 81/307 (26%), Positives = 155/307 (50%), Gaps = 10/307 (3%)
Query: 164 PSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKA 223
P++ ++L + A + AEEVF+ E + ++F+ M+ +Y ++G ++ A
Sbjct: 186 PASRAVAVVLGVLGRARQDSIAEEVFLRFAGEGAT-----VQVFNAMMGVYARSGRFDDA 240
Query: 224 RKLFALMAERGVQQSTVTYNSLMSFETNYKEVSK-----IYDQMQRAGLQPDVVSYALLI 278
R+L M +RG+ V++N+L++ + ++ + +++++GL+PDV++Y LI
Sbjct: 241 RQLLDTMHDRGIDPDLVSFNTLINARSKSGCLAAGVALDLLFEVRQSGLRPDVITYNTLI 300
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCS 338
+A ++ E+A+ VFEEM+ + RP YN ++ G ++A +F +
Sbjct: 301 SACSQSSNLEDAVTVFEEMIASECRPDLWTYNAMVSVHGRCGKAEEAERLFGELVEKGFM 360
Query: 339 PDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEI 398
PD +Y ++L A+ +++ E L + GF N ITY T+I Y K+ L+ + +
Sbjct: 361 PDAVTYNSLLYAFAKEGNVDKVEHTCEELVKAGFKKNEITYNTMIHMYGKMGRLDLAVGL 420
Query: 399 YDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKT 458
YD+MR G P+ +T ++D+ GK A ++M G P A + L+
Sbjct: 421 YDEMRAVGCTPDAVTYTVMIDSLGKMDKIAEAGKVLEDMADAGLKPTLVAFSALICAYAK 480
Query: 459 ADERNEA 465
R +A
Sbjct: 481 GGRRADA 487
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 93/375 (24%), Positives = 165/375 (44%), Gaps = 6/375 (1%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
LI AY + G + KA V M K G P+V S +M A GR + +Q
Sbjct: 786 LIHAYAESGLYEKARAVFDNMIKTGPLPTVDSVNGMMRALIVDGRLDELYVVVGELQDMD 845
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
+ S T ++L F +A E +++ + + + P+ ++ M + +
Sbjct: 846 FKISKSTVLLMLDAFAKAGDVFEVMKIYNGM---KAAGYLPNMHLYRSMTSLLCHHNRFR 902
Query: 222 KARKLFALMAERGVQQSTVTYNSLMSFET---NYKEVSKIYDQMQRAGLQPDVVSYALLI 278
+ A M G + +NSL++ T N+ +++Y + AGL+PD +Y LI
Sbjct: 903 DVELMIAEMEGAGFKPDLSIFNSLLNMYTAAGNFDRTTQVYQSILEAGLEPDEDTYNTLI 962
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCS 338
Y ++ R EE + EM G+ P ++Y LL A A + + +QA +F+ MR
Sbjct: 963 VMYCRSLRPEEGFTLLNEMGKRGLTPKLQSYKSLLAASAKAELREQADQLFEEMRSKSYQ 1022
Query: 339 PDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEI 398
+ Y M+ Y NA + AE +K+DG P + T L+ Y + +
Sbjct: 1023 LNRSIYHMMMKIYRNAGNHSKAENLLAVMKEDGIEPTIATMHILMTSYGTAGQPHEAENV 1082
Query: 399 YDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKT 458
+ ++ + ++ + ++T+ DAY KN D+D + EM+ G PD + + A
Sbjct: 1083 LNSLKSSSLEVSTLPYSTVFDAYLKNGDYDLGIKKLLEMKRDGVEPDHQVWTCFIRAASL 1142
Query: 459 ADERNEANELLGNFN 473
++ +A LL +
Sbjct: 1143 CEQTADAILLLKSLQ 1157
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 81/360 (22%), Positives = 165/360 (45%), Gaps = 10/360 (2%)
Query: 125 KGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKE 184
+ AP+ + ++ GR + AE +F R G + + ++ ++ + +F +
Sbjct: 182 RSTAPASRAVAVVLGVLGRARQDSIAEEVFLRFAGEGA--TVQVFNAMMGVYARSGRFDD 239
Query: 185 AEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAER--GVQQSTVTY 242
A ++ T+ D + PD F+ +I K+G L L R G++ +TY
Sbjct: 240 ARQLLDTMHDR---GIDPDLVSFNTLINARSKSGCLAAGVALDLLFEVRQSGLRPDVITY 296
Query: 243 NSLMSF---ETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLD 299
N+L+S +N ++ ++++M + +PD+ +Y +++ +G+ + EEA +F E+++
Sbjct: 297 NTLISACSQSSNLEDAVTVFEEMIASECRPDLWTYNAMVSVHGRCGKAEEAERLFGELVE 356
Query: 300 AGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEG 359
G P YN LL AFA G VD+ + + + + +Y TM+ Y ++
Sbjct: 357 KGFMPDAVTYNSLLYAFAKEGNVDKVEHTCEELVKAGFKKNEITYNTMIHMYGKMGRLDL 416
Query: 360 AEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMD 419
A + ++ G P+ +TY +I K++ + + ++ + M G+KP F+ ++
Sbjct: 417 AVGLYDEMRAVGCTPDAVTYTVMIDSLGKMDKIAEAGKVLEDMADAGLKPTLVAFSALIC 476
Query: 420 AYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEP 479
AY K A + M + G PD+ A ++L + + E + L + N P
Sbjct: 477 AYAKGGRRADAEKTFDCMIASGVKPDRLAYLVMLDVFARSGETEKMLRLYRTMMNDNYRP 536
Score = 92.4 bits (228), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 78/379 (20%), Positives = 160/379 (42%), Gaps = 36/379 (9%)
Query: 100 LMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQS 159
+++I AYG + +AE ++ + + + + AL+ AY G Y+ A A+F M
Sbjct: 750 VIIIEAYGNIKLWQQAEILVKGLRQASGIDRRIWN-ALIHAYAESGLYEKARAVFDNMIK 808
Query: 160 SGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGG 219
+GP P+ + +++ + + +E+++ + + + K + +M+ + KAG
Sbjct: 809 TGPLPTVDSVNGMMRALIVDGRL---DELYVVVGELQDMDFKISKSTVLLMLDAFAKAG- 864
Query: 220 YEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSKIYDQMQRAGLQPDVVSYALLIN 279
+ EV KIY+ M+ AG P++ Y + +
Sbjct: 865 -------------------------------DVFEVMKIYNGMKAAGYLPNMHLYRSMTS 893
Query: 280 AYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSP 339
R + + EM AG +P +N LL+ + +G D+ V++ + P
Sbjct: 894 LLCHHNRFRDVELMIAEMEGAGFKPDLSIFNSLLNMYTAAGNFDRTTQVYQSILEAGLEP 953
Query: 340 DICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIY 399
D +Y T++ Y + E + + G P + +Y +L+ AK E+ +++
Sbjct: 954 DEDTYNTLIVMYCRSLRPEEGFTLLNEMGKRGLTPKLQSYKSLLAASAKAELREQADQLF 1013
Query: 400 DKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTA 459
++MR + N++I+ +M Y + A M+ G P +IL++ TA
Sbjct: 1014 EEMRSKSYQLNRSIYHMMMKIYRNAGNHSKAENLLAVMKEDGIEPTIATMHILMTSYGTA 1073
Query: 460 DERNEANELLGNFNHPNNE 478
+ +EA +L + + E
Sbjct: 1074 GQPHEAENVLNSLKSSSLE 1092
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 72/329 (21%), Positives = 147/329 (44%), Gaps = 38/329 (11%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
+ + + ++I + GK +A KVL M G P++V+ +AL+ AY +GGR +AE F
Sbjct: 432 DAVTYTVMIDSLGKMDKIAEAGKVLEDMADAGLKPTLVAFSALICAYAKGGRRADAEKTF 491
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
M +SG +P L Y ++L +F + + ++ ++ T++++ +PD M+ +++
Sbjct: 492 DCMIASGVKPDRLAYLVMLDVFARSGETEKMLRLYRTMMNDN---YRPDDDMYQVLLVAL 548
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSKIYDQMQRAGLQPDVVSY 274
K E+ ++ M E Q S ++++ + K+ + G +PD S
Sbjct: 549 AKEDKCEEIEEIIQDM-ELLCQMSLGVISTILIKARCVSQGGKLLKKACLQGYKPDAKSL 607
Query: 275 ALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRR 334
++NAY + EE L++ E + D H + + ++ + + C ++
Sbjct: 608 WSIMNAYVMTEKHEEGLSLLECIRD------HVSSS--------QDLISECSIILLCRKQ 653
Query: 335 DRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEK 394
T +SAY E++ +RL N Y LI + +
Sbjct: 654 -----------TSISAY---------EQYSQRLMLKYPGQNCNLYEHLITCLVEAELFSE 693
Query: 395 MMEIYDKMRVNGIKPNQTIFTTIMDAYGK 423
+++ M+ GI+ ++ I+ +I+ Y K
Sbjct: 694 ACQVFCDMQFIGIEASKNIYESIISTYCK 722
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 77/388 (19%), Positives = 166/388 (42%), Gaps = 6/388 (1%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
LIT + F++A +V M G S + +++ Y + G + A + SG
Sbjct: 681 LITCLVEAELFSEACQVFCDMQFIGIEASKNIYESIISTYCKLGFPETAHGLMDDALQSG 740
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
+ L+ ++I+ K + E+ + L + D+++++ +I+ Y ++G YE
Sbjct: 741 IPLNILSCRVIIIEAYGNIKLWQQAEILVKGLRQASGI---DRRIWNALIHAYAESGLYE 797
Query: 222 KARKLFALMAERGVQQSTVTYNSLMS---FETNYKEVSKIYDQMQRAGLQPDVVSYALLI 278
KAR +F M + G + + N +M + E+ + ++Q + + L++
Sbjct: 798 KARAVFDNMIKTGPLPTVDSVNGMMRALIVDGRLDELYVVVGELQDMDFKISKSTVLLML 857
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCS 338
+A+ KA E + ++ M AG P Y + + M
Sbjct: 858 DAFAKAGDVFEVMKIYNGMKAAGYLPNMHLYRSMTSLLCHHNRFRDVELMIAEMEGAGFK 917
Query: 339 PDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEI 398
PD+ + ++L+ Y A + + + ++ + + G P+ TY TLI Y + E+ +
Sbjct: 918 PDLSIFNSLLNMYTAAGNFDRTTQVYQSILEAGLEPDEDTYNTLIVMYCRSLRPEEGFTL 977
Query: 399 YDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKT 458
++M G+ P + +++ A K + + A ++EM S + ++ ++++ + +
Sbjct: 978 LNEMGKRGLTPKLQSYKSLLAASAKAELREQADQLFEEMRSKSYQLNRSIYHMMMKIYRN 1037
Query: 459 ADERNEANELLGNFNHPNNEPGINGLSI 486
A ++A LL EP I + I
Sbjct: 1038 AGNHSKAENLLAVMKEDGIEPTIATMHI 1065
>gi|410110103|gb|AFV61131.1| pentatricopeptide repeat-containing protein 123, partial [Lippia
alba]
Length = 419
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 94/363 (25%), Positives = 177/363 (48%), Gaps = 37/363 (10%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
LI K D++KA + S + + G+ P +V++ A++ +G+ ++ A ++ M+++G
Sbjct: 56 LIELSRKLCDYSKAIAIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLIGEMKTAG 115
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
P+ +Y +L ++VE KF EA VF + + E K L D ++MI +Y + G +
Sbjct: 116 VMPNTSSYSTLLTMYVENKKFLEALSVF-SEMREIKCLL--DLTTCNIMIDVYGQLGMAK 172
Query: 222 KARKLFALMAERGVQQSTVTYNSLMSFETN---YKEVSKIYDQMQRAGLQPDVVSYALLI 278
+A KLF M + G++ + V+YN+L+ + + E ++ MQR ++ +VV+Y ++
Sbjct: 173 EADKLFWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMM 232
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCS 338
YGK E+A + +EM G+ P Y+ ++ + G +D+A +F+ +R
Sbjct: 233 MIYGKTLEHEKANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVE 292
Query: 339 PDICSYTTMLSAY-------------------------------VNASDMEGAEKFFRRL 367
D + TM+ AY A +E A FR+
Sbjct: 293 IDQILFQTMIVAYERAGLVAHAKRLLHELKRPDNIPRDTAIHILAGAGRIEEATYVFRQA 352
Query: 368 KQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDF 427
G V ++ + +I +K ++E++DKMR G P+ + +++AYGK ++F
Sbjct: 353 IDAGEVKDITVFERMIHLLSKYKKYXNVVEVFDKMRGLGYFPDSNVIAVVLNAYGKLQEF 412
Query: 428 DSA 430
D A
Sbjct: 413 DKA 415
Score = 132 bits (333), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 85/331 (25%), Positives = 158/331 (47%), Gaps = 6/331 (1%)
Query: 152 AIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMI 211
+F M+ P TY ++ F + F +A ++ +++++ P D ++ +I
Sbjct: 1 GLFDEMRQRALSPDRYTYSTLITHFGKEGLF-DAALSWLQKMEQDRVP--GDLVLYSNLI 57
Query: 212 YMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSF---ETNYKEVSKIYDQMQRAGLQ 268
+ +K Y KA +F+ + G V YN++++ ++E + +M+ AG+
Sbjct: 58 ELSRKLCDYSKAIAIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLIGEMKTAGVM 117
Query: 269 PDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTV 328
P+ SY+ L+ Y + ++ EAL+VF EM + NI++D + GM +A +
Sbjct: 118 PNTSSYSTLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKL 177
Query: 329 FKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAK 388
F MR+ P++ SY T+L Y +A A FR +++ NV+TY +++ Y K
Sbjct: 178 FWGMRKMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGK 237
Query: 389 VNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKA 448
EK + +M+ GI+PN ++TI+ +GK D A + ++++ S G DQ
Sbjct: 238 TLEHEKANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQIL 297
Query: 449 KNILLSLAKTADERNEANELLGNFNHPNNEP 479
++ + A A LL P+N P
Sbjct: 298 FQTMIVAYERAGLVAHAKRLLHELKRPDNIP 328
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 73/303 (24%), Positives = 153/303 (50%), Gaps = 6/303 (1%)
Query: 122 MNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANK 181
M ++ +P +++ L+ +G+ G + A + ++M+ + Y +++L +
Sbjct: 6 MRQRALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSRKLCD 65
Query: 182 FKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVT 241
+ +A +F L ++S PD ++ MI ++ KA + +AR L M GV +T +
Sbjct: 66 YSKAIAIFSRL---KRSGFTPDLVAYNAMINVFGKAKLFREARSLIGEMKTAGVMPNTSS 122
Query: 242 YNSLMSFETNYK---EVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEML 298
Y++L++ K E ++ +M+ D+ + ++I+ YG+ +EA +F M
Sbjct: 123 YSTLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWGMR 182
Query: 299 DAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDME 358
G+ P +YN LL + + + +A +F+ M+R ++ +Y +M+ Y + E
Sbjct: 183 KMGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHE 242
Query: 359 GAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIM 418
A + ++ G PN ITY T+I + KV L++ ++ K+R +G++ +Q +F T++
Sbjct: 243 KANNLIQEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDQILFQTMI 302
Query: 419 DAY 421
AY
Sbjct: 303 VAY 305
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 85/190 (44%)
Query: 292 AVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAY 351
+F+EM + P Y+ L+ F G+ D A + + M +DR D+ Y+ ++
Sbjct: 1 GLFDEMRQRALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELS 60
Query: 352 VNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQ 411
D A F RLK+ GF P+++ Y +I + K + + +M+ G+ PN
Sbjct: 61 RKLCDYSKAIAIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLIGEMKTAGVMPNT 120
Query: 412 TIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGN 471
+ ++T++ Y +NK F A+ + EM D NI++ + EA++L
Sbjct: 121 SSYSTLLTMYVENKKFLEALSVFSEMREIKCLLDLTTCNIMIDVYGQLGMAKEADKLFWG 180
Query: 472 FNHPNNEPGI 481
EP +
Sbjct: 181 MRKMGIEPNV 190
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 56/236 (23%), Positives = 112/236 (47%), Gaps = 6/236 (2%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + + L+ YG F +A + M +K +VV++ ++M YG+ ++ A +
Sbjct: 189 NVVSYNTLLRVYGDAELFGEAIHLFRLMQRKNIEQNVVTYNSMMMIYGKTLEHEKANNLI 248
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
+ MQS G P+++TY I+ ++ + K A +F L S ++ DQ +F MI Y
Sbjct: 249 QEMQSRGIEPNSITYSTIISIWGKVGKLDRAAMLFQKL---RSSGVEIDQILFQTMIVAY 305
Query: 215 KKAGGYEKARKLFA-LMAERGVQQSTVTYNSLMSFETNYKEVSKIYDQMQRAGLQPDVVS 273
++AG A++L L + + T + +++ +E + ++ Q AG D+
Sbjct: 306 ERAGLVAHAKRLLHELKRPDNIPRDTAIH--ILAGAGRIEEATYVFRQAIDAGEVKDITV 363
Query: 274 YALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVF 329
+ +I+ K ++ + VF++M G P ++L+A+ D+A V+
Sbjct: 364 FERMIHLLSKYKKYXNVVEVFDKMRGLGYFPDSNVIAVVLNAYGKLQEFDKANDVY 419
Score = 47.4 bits (111), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 27/123 (21%), Positives = 53/123 (43%)
Query: 363 FFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYG 422
F ++Q P+ TY TLI + K + + KM + + + +++ +++
Sbjct: 2 LFDEMRQRALSPDRYTYSTLITHFGKEGLFDAALSWLQKMEQDRVPGDLVLYSNLIELSR 61
Query: 423 KNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGIN 482
K D+ A+ + ++ GF PD A N ++++ A EA L+G P +
Sbjct: 62 KLCDYSKAIAIFSRLKRSGFTPDLVAYNAMINVFGKAKLFREARSLIGEMKTAGVMPNTS 121
Query: 483 GLS 485
S
Sbjct: 122 SYS 124
>gi|297849294|ref|XP_002892528.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297338370|gb|EFH68787.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 606
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 92/350 (26%), Positives = 168/350 (48%), Gaps = 45/350 (12%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAY---GRGGRYKNAE 151
N F ++I A K G NKA V+ M GY+P+VVS+ L++ Y G G+ A+
Sbjct: 222 NVFTFNVVINALCKTGKMNKARDVMEDMKVYGYSPNVVSYNTLIDGYCKLGGNGKMYKAD 281
Query: 152 AIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMI 211
A+ + M + P+ T+ I++ F + + + +VF +LD++ P
Sbjct: 282 AVLKEMVENEVSPNLTTFNILIDGFWKDDNLPGSLKVFKEMLDQDVIP------------ 329
Query: 212 YMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSK---IYDQMQRAGLQ 268
+ +TYNSL++ N ++++ + D+M AG+Q
Sbjct: 330 --------------------------NVITYNSLINGLCNGGKINEAIGMRDKMVSAGVQ 363
Query: 269 PDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTV 328
P++++Y LIN + K +EAL +F+ + G RPT + YN+L+DA+ G +D +
Sbjct: 364 PNLITYHSLINGFCKNGMMKEALDMFDSVKGQGTRPTTRMYNMLIDAYCKLGKIDDGFAL 423
Query: 329 FKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAK 388
+ M R+ PD+ +Y +++ ++E A+K F +L G +P+++T+ L++GY
Sbjct: 424 KEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTNKG-LPDLVTFHILMEGYCS 482
Query: 389 VNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEME 438
K + +M G+KP + +M Y K + +A +ME
Sbjct: 483 RGESRKAAMLLKEMSKMGLKPRHLTYNIMMKGYCKEGNLKAATNMRTQME 532
Score = 125 bits (314), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 88/359 (24%), Positives = 163/359 (45%), Gaps = 10/359 (2%)
Query: 101 MLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSS 160
ML+ AY F + GY S +S LM A + R + E +++ M
Sbjct: 158 MLVLAYANNSRFELGFEAFKRSGYYGYKLSAMSCKPLMVALLKQNRSADVEYLYKEMIRR 217
Query: 161 GPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGY 220
+P+ T+ +++ + K +A +V + D + P+ ++ +I Y K GG
Sbjct: 218 KIQPNVFTFNVVINALCKTGKMNKARDV---MEDMKVYGYSPNVVSYNTLIDGYCKLGGN 274
Query: 221 EKARKLFAL---MAERGVQQSTVTYNSLMSF---ETNYKEVSKIYDQMQRAGLQPDVVSY 274
K K A+ M E V + T+N L+ + N K++ +M + P+V++Y
Sbjct: 275 GKMYKADAVLKEMVENEVSPNLTTFNILIDGFWKDDNLPGSLKVFKEMLDQDVIPNVITY 334
Query: 275 ALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRR 334
LIN + EA+ + ++M+ AGV+P Y+ L++ F +GM+ +A +F ++
Sbjct: 335 NSLINGLCNGGKINEAIGMRDKMVSAGVQPNLITYHSLINGFCKNGMMKEALDMFDSVKG 394
Query: 335 DRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEK 394
P Y ++ AY ++ ++++G VP+V TY LI G + N+E
Sbjct: 395 QGTRPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEA 454
Query: 395 MMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILL 453
+++D++ G+ P+ F +M+ Y + A + KEM G P NI++
Sbjct: 455 AKKLFDQLTNKGL-PDLVTFHILMEGYCSRGESRKAAMLLKEMSKMGLKPRHLTYNIMM 512
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 76/289 (26%), Positives = 137/289 (47%), Gaps = 8/289 (2%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N F +LI + K + + KV M + P+V+++ +L+ GG+ A +
Sbjct: 295 NLTTFNILIDGFWKDDNLPGSLKVFKEMLDQDVIPNVITYNSLINGLCNGGKINEAIGMR 354
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
+M S+G +P+ +TY ++ F + KEA ++F ++ + +P +M++M+I Y
Sbjct: 355 DKMVSAGVQPNLITYHSLINGFCKNGMMKEALDMFDSV---KGQGTRPTTRMYNMLIDAY 411
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSL---MSFETNYKEVSKIYDQMQRAGLQPDV 271
K G + L M G+ TYN L + N + K++DQ+ GL PD+
Sbjct: 412 CKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTNKGL-PDL 470
Query: 272 VSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKC 331
V++ +L+ Y +A + +EM G++P H YNI++ + G + A +
Sbjct: 471 VTFHILMEGYCSRGESRKAAMLLKEMSKMGLKPRHLTYNIMMKGYCKEGNLKAATNMRTQ 530
Query: 332 MRRD-RCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITY 379
M ++ R ++ SY +L Y +E A + + G VPN ITY
Sbjct: 531 MEKERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEMLEKGLVPNRITY 579
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 76/321 (23%), Positives = 145/321 (45%), Gaps = 38/321 (11%)
Query: 137 LMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEE 196
L+ AY R++ F+R G + SA++ + ++ ++ N+ + E ++ ++
Sbjct: 159 LVLAYANNSRFELGFEAFKRSGYYGYKLSAMSCKPLMVALLKQNRSADVEYLYKEMI--- 215
Query: 197 KSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVS 256
+ ++P+ F+++I K G KAR
Sbjct: 216 RRKIQPNVFTFNVVINALCKTGKMNKARD------------------------------- 244
Query: 257 KIYDQMQRAGLQPDVVSYALLINAY---GKARREEEALAVFEEMLDAGVRPTHKAYNILL 313
+ + M+ G P+VVSY LI+ Y G + +A AV +EM++ V P +NIL+
Sbjct: 245 -VMEDMKVYGYSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENEVSPNLTTFNILI 303
Query: 314 DAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFV 373
D F + + VFK M P++ +Y ++++ N + A ++ G
Sbjct: 304 DGFWKDDNLPGSLKVFKEMLDQDVIPNVITYNSLINGLCNGGKINEAIGMRDKMVSAGVQ 363
Query: 374 PNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVW 433
PN+ITY +LI G+ K +++ ++++D ++ G +P ++ ++DAY K D
Sbjct: 364 PNLITYHSLINGFCKNGMMKEALDMFDSVKGQGTRPTTRMYNMLIDAYCKLGKIDDGFAL 423
Query: 434 YKEMESCGFPPDQKAKNILLS 454
+EME G PD N L++
Sbjct: 424 KEEMEREGIVPDVGTYNCLIA 444
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 107/232 (46%), Gaps = 8/232 (3%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + + LI + K G +A + + +G P+ + L++AY + G+ + A+
Sbjct: 365 NLITYHSLINGFCKNGMMKEALDMFDSVKGQGTRPTTRMYNMLIDAYCKLGKIDDGFALK 424
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
M+ G P TY ++ + A+++F D+ + PD FH+++ Y
Sbjct: 425 EEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLF----DQLTNKGLPDLVTFHILMEGY 480
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSLM---SFETNYKEVSKIYDQMQRAG-LQPD 270
G KA L M++ G++ +TYN +M E N K + + QM++ L+ +
Sbjct: 481 CSRGESRKAAMLLKEMSKMGLKPRHLTYNIMMKGYCKEGNLKAATNMRTQMEKERRLRMN 540
Query: 271 VVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMV 322
V SY +L+ Y + + E+A + EML+ G+ P Y I+ + G V
Sbjct: 541 VASYNVLLQGYSQKGKLEDANMLLNEMLEKGLVPNRITYEIVKEEMVDKGFV 592
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 47/193 (24%), Positives = 85/193 (44%), Gaps = 3/193 (1%)
Query: 276 LLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRD 335
+L+ AY R E F+ G + + + L+ A ++K M R
Sbjct: 158 MLVLAYANNSRFELGFEAFKRSGYYGYKLSAMSCKPLMVALLKQNRSADVEYLYKEMIRR 217
Query: 336 RCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKM 395
+ P++ ++ +++A M A +K G+ PNV++Y TLI GY K+ KM
Sbjct: 218 KIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGYSPNVVSYNTLIDGYCKLGGNGKM 277
Query: 396 ME---IYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNIL 452
+ + +M N + PN T F ++D + K+ + ++ +KEM P+ N L
Sbjct: 278 YKADAVLKEMVENEVSPNLTTFNILIDGFWKDDNLPGSLKVFKEMLDQDVIPNVITYNSL 337
Query: 453 LSLAKTADERNEA 465
++ + NEA
Sbjct: 338 INGLCNGGKINEA 350
>gi|357499275|ref|XP_003619926.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355494941|gb|AES76144.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 727
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 90/363 (24%), Positives = 173/363 (47%), Gaps = 6/363 (1%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
NE + LI G F + ++ M ++G SV T L++ + G A +F
Sbjct: 219 NEFTYGSLIRGLCGVGKFLEGFGLVDEMIRRGLDVSVYVFTVLIDGLCKNGMLVEAREMF 278
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
M + G P+ +T ++ + A E+F + + K D +++ I+ Y
Sbjct: 279 DEMVNRGYEPNIVTCTALMGGYCLKGNVDMARELFDAI---GEWGFKRDVWTYNVFIHGY 335
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVS---KIYDQMQRAGLQPDV 271
K G A ++F M GV + VTYNSL+ EVS +I M R+GL PD+
Sbjct: 336 CKVGRVRDAVRVFDEMCREGVVPNIVTYNSLIDCLCKAGEVSGAWEIVKTMHRSGLTPDI 395
Query: 272 VSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKC 331
V+ +L++ K++R ++A+ +F +++++G+ P +Y IL+ S + +A + +
Sbjct: 396 VTCCILLDGLCKSKRLDQAILLFNQLVESGLTPDVWSYTILIHGCCTSRRMGEAMNLLRD 455
Query: 332 MRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNN 391
M P I +Y+ ++ + + A + + G +P+ ITY L+ K +
Sbjct: 456 MHLKNLVPHIVTYSCLIDGLCRSGRISNAWRLLNEMHVKGPLPDTITYSILLDALWKKQH 515
Query: 392 LEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNI 451
L++ + ++++M G++P+ +T ++D Y K++ D A+ ++EM PD I
Sbjct: 516 LDEAVFLFNQMIKRGLEPDVMCYTIMIDGYCKSERIDEAINLFREMHMKNLVPDIVTYTI 575
Query: 452 LLS 454
L +
Sbjct: 576 LFN 578
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 114/462 (24%), Positives = 197/462 (42%), Gaps = 21/462 (4%)
Query: 55 GQPLPKDLVLGTLVRLKQLKKWNVVSEVLEWLR-----IQSWWDFNEMDFLMLITAYGKQ 109
G+ L + L T+ LK V VL+ L + + + NE+ + +LI +
Sbjct: 96 GKILKRGYGLDTVALNTVLKGLCVNGGVLKALEFHDEIVNNGFSLNEVSYGILINGLCEN 155
Query: 110 GDFNKAEKVLSFMNKK------GY--APSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
G N+A +L + K+ G+ +VV ++ +++ R G + M +G
Sbjct: 156 GRVNEAVNLLRMIEKEKEKEKDGFFVKGNVVMYSIVIDCLCRNGFVDEGFEFYNEMMGNG 215
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEE-KSPLKPDQKMFHMMIYMYKKAGGY 220
P+ TY +++ KF E L+DE + L +F ++I K G
Sbjct: 216 VCPNEFTYGSLIRGLCGVGKFLEG----FGLVDEMIRRGLDVSVYVFTVLIDGLCKNGML 271
Query: 221 EKARKLFALMAERGVQQSTVTYNSLM---SFETNYKEVSKIYDQMQRAGLQPDVVSYALL 277
+AR++F M RG + + VT +LM + N +++D + G + DV +Y +
Sbjct: 272 VEAREMFDEMVNRGYEPNIVTCTALMGGYCLKGNVDMARELFDAIGEWGFKRDVWTYNVF 331
Query: 278 INAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRC 337
I+ Y K R +A+ VF+EM GV P YN L+D +G V A + K M R
Sbjct: 332 IHGYCKVGRVRDAVRVFDEMCREGVVPNIVTYNSLIDCLCKAGEVSGAWEIVKTMHRSGL 391
Query: 338 SPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMME 397
+PDI + +L + ++ A F +L + G P+V +Y LI G + + M
Sbjct: 392 TPDIVTCCILLDGLCKSKRLDQAILLFNQLVESGLTPDVWSYTILIHGCCTSRRMGEAMN 451
Query: 398 IYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAK 457
+ M + + P+ ++ ++D ++ +A EM G PD +ILL
Sbjct: 452 LLRDMHLKNLVPHIVTYSCLIDGLCRSGRISNAWRLLNEMHVKGPLPDTITYSILLDALW 511
Query: 458 TADERNEANELLGNFNHPNNEPGINGLSISVDEEDDDDDDDE 499
+EA L EP + +I +D + DE
Sbjct: 512 KKQHLDEAVFLFNQMIKRGLEPDVMCYTIMIDGYCKSERIDE 553
Score = 125 bits (313), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 91/374 (24%), Positives = 171/374 (45%), Gaps = 16/374 (4%)
Query: 59 PKDLVLGTLVRL-----KQLKKWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFN 113
P + G+L+R K L+ + +V E+ I+ D + F +LI K G
Sbjct: 218 PNEFTYGSLIRGLCGVGKFLEGFGLVDEM-----IRRGLDVSVYVFTVLIDGLCKNGMLV 272
Query: 114 KAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIIL 173
+A ++ M +GY P++V+ TALM Y G A +F + G + TY + +
Sbjct: 273 EAREMFDEMVNRGYEPNIVTCTALMGGYCLKGNVDMARELFDAIGEWGFKRDVWTYNVFI 332
Query: 174 KLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAER 233
+ + + ++A VF + E + P+ ++ +I KAG A ++ M
Sbjct: 333 HGYCKVGRVRDAVRVFDEMCRE---GVVPNIVTYNSLIDCLCKAGEVSGAWEIVKTMHRS 389
Query: 234 GVQQSTVTYNSLMSFETNYKEVSK---IYDQMQRAGLQPDVVSYALLINAYGKARREEEA 290
G+ VT L+ K + + +++Q+ +GL PDV SY +LI+ +RR EA
Sbjct: 390 GLTPDIVTCCILLDGLCKSKRLDQAILLFNQLVESGLTPDVWSYTILIHGCCTSRRMGEA 449
Query: 291 LAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSA 350
+ + +M + P Y+ L+D SG + A + M PD +Y+ +L A
Sbjct: 450 MNLLRDMHLKNLVPHIVTYSCLIDGLCRSGRISNAWRLLNEMHVKGPLPDTITYSILLDA 509
Query: 351 YVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPN 410
++ A F ++ + G P+V+ Y +I GY K +++ + ++ +M + + P+
Sbjct: 510 LWKKQHLDEAVFLFNQMIKRGLEPDVMCYTIMIDGYCKSERIDEAINLFREMHMKNLVPD 569
Query: 411 QTIFTTIMDAYGKN 424
+T + +A K+
Sbjct: 570 IVTYTILFNAVFKS 583
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 74/299 (24%), Positives = 140/299 (46%), Gaps = 11/299 (3%)
Query: 84 EWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGR 143
EW + W +N + I Y K G A +V M ++G P++V++ +L++ +
Sbjct: 318 EWGFKRDVWTYN-----VFIHGYCKVGRVRDAVRVFDEMCREGVVPNIVTYNSLIDCLCK 372
Query: 144 GGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPD 203
G A I + M SG P +T I+L ++ + +A +F L++ S L PD
Sbjct: 373 AGEVSGAWEIVKTMHRSGLTPDIVTCCILLDGLCKSKRLDQAILLFNQLVE---SGLTPD 429
Query: 204 QKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVS---KIYD 260
+ ++I+ + +A L M + + VTY+ L+ +S ++ +
Sbjct: 430 VWSYTILIHGCCTSRRMGEAMNLLRDMHLKNLVPHIVTYSCLIDGLCRSGRISNAWRLLN 489
Query: 261 QMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISG 320
+M G PD ++Y++L++A K + +EA+ +F +M+ G+ P Y I++D + S
Sbjct: 490 EMHVKGPLPDTITYSILLDALWKKQHLDEAVFLFNQMIKRGLEPDVMCYTIMIDGYCKSE 549
Query: 321 MVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITY 379
+D+A +F+ M PDI +YT + +A + KF ++ P V+ Y
Sbjct: 550 RIDEAINLFREMHMKNLVPDIVTYTILFNAVFKSGSNSYEWKFVNVIRDINPPPRVLKY 608
Score = 40.0 bits (92), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 34/140 (24%), Positives = 62/140 (44%), Gaps = 8/140 (5%)
Query: 315 AFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVP 374
F G V + ++F + + D + T+L + A +F + +GF
Sbjct: 81 CFFHLGHVSFSFSIFGKILKRGYGLDTVALNTVLKGLCVNGGVLKALEFHDEIVNNGFSL 140
Query: 375 NVITYGTLIKGYA---KVN---NLEKMMEIYDKMRVNG--IKPNQTIFTTIMDAYGKNKD 426
N ++YG LI G +VN NL +M+E + +G +K N +++ ++D +N
Sbjct: 141 NEVSYGILINGLCENGRVNEAVNLLRMIEKEKEKEKDGFFVKGNVVMYSIVIDCLCRNGF 200
Query: 427 FDSAVVWYKEMESCGFPPDQ 446
D +Y EM G P++
Sbjct: 201 VDEGFEFYNEMMGNGVCPNE 220
>gi|108862162|gb|ABA95747.2| Cytochrome P450 family protein [Oryza sativa Japonica Group]
Length = 1595
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 97/355 (27%), Positives = 160/355 (45%), Gaps = 6/355 (1%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
LI GK+GD K + M K+G++P+V + ++++A A I ++M +SG
Sbjct: 1054 LINWLGKKGDLEKIGSLFLEMRKRGFSPNVQIYNSVIDALCNCRSATQAMVILKQMFASG 1113
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
P +T+ ++ ++AE + E L P+Q + +I+ + G
Sbjct: 1114 CDPDIITFNTLITGLCHEGHVRKAEHFLREAIRRE---LNPNQLSYTPLIHGFCMRGELM 1170
Query: 222 KARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSK---IYDQMQRAGLQPDVVSYALLI 278
A L M RG VT+ +L+ +VS+ + ++M + PDV Y +LI
Sbjct: 1171 VASDLLVEMMGRGHTPDVVTFGALIHGLVVAGKVSEALIVREKMTERQVFPDVNIYNVLI 1230
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCS 338
+ K R A + EEML+ V+P Y L+D F S + AR +F+ M
Sbjct: 1231 SGLCKKRMLPAAKNILEEMLEKNVQPDEFVYATLIDGFIRSENLGDARKIFEFMEHKGVC 1290
Query: 339 PDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEI 398
PDI S M+ Y M A +++ G +P+ TY T+I GYAK NL +
Sbjct: 1291 PDIVSCNAMIKGYCQFGMMSEAILCMSNMRKVGCIPDEFTYTTVISGYAKQGNLNGALRW 1350
Query: 399 YDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILL 453
M KPN ++++++ Y K D DSA + M++ P+ IL+
Sbjct: 1351 LCDMIKRKCKPNVVTYSSLINGYCKTGDTDSAEGLFANMQAEALSPNVVTYTILI 1405
Score = 131 bits (330), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 90/392 (22%), Positives = 170/392 (43%), Gaps = 8/392 (2%)
Query: 101 MLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSS 160
+LI Y ++GD + +L M G+ P++V++ +L+ G+ G + ++F M+
Sbjct: 1018 VLIDGYCRRGDMGRGLLLLGEMETNGFLPTLVTYGSLINWLGKKGDLEKIGSLFLEMRKR 1077
Query: 161 GPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGY 220
G P+ Y ++ + A + + L S PD F+ +I G
Sbjct: 1078 GFSPNVQIYNSVIDALCNC---RSATQAMVILKQMFASGCDPDIITFNTLITGLCHEGHV 1134
Query: 221 EKARKLFALMAERGVQQSTVTYNSLMSFETNYKEV---SKIYDQMQRAGLQPDVVSYALL 277
KA R + + ++Y L+ E+ S + +M G PDVV++ L
Sbjct: 1135 RKAEHFLREAIRRELNPNQLSYTPLIHGFCMRGELMVASDLLVEMMGRGHTPDVVTFGAL 1194
Query: 278 INAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRC 337
I+ A + EAL V E+M + V P YN+L+ M+ A+ + + M
Sbjct: 1195 IHGLVVAGKVSEALIVREKMTERQVFPDVNIYNVLISGLCKKRMLPAAKNILEEMLEKNV 1254
Query: 338 SPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMME 397
PD Y T++ ++ + ++ A K F ++ G P++++ +IKGY + + + +
Sbjct: 1255 QPDEFVYATLIDGFIRSENLGDARKIFEFMEHKGVCPDIVSCNAMIKGYCQFGMMSEAIL 1314
Query: 398 IYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLS-LA 456
MR G P++ +TT++ Y K + + A+ W +M P+ + L++
Sbjct: 1315 CMSNMRKVGCIPDEFTYTTVISGYAKQGNLNGALRWLCDMIKRKCKPNVVTYSSLINGYC 1374
Query: 457 KTADERNEANELLGNFNHPNNEPGINGLSISV 488
KT D + A L N P + +I +
Sbjct: 1375 KTGDT-DSAEGLFANMQAEALSPNVVTYTILI 1405
Score = 118 bits (295), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 78/331 (23%), Positives = 145/331 (43%), Gaps = 6/331 (1%)
Query: 93 DFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEA 152
D + + F LIT +G KAE L ++ P+ +S+T L+ + G A
Sbjct: 1115 DPDIITFNTLITGLCHEGHVRKAEHFLREAIRRELNPNQLSYTPLIHGFCMRGELMVASD 1174
Query: 153 IFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIY 212
+ M G P +T+ ++ V A K EA V + + + + PD +++++I
Sbjct: 1175 LLVEMMGRGHTPDVVTFGALIHGLVVAGKVSEALIVREKMTERQ---VFPDVNIYNVLIS 1231
Query: 213 MYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSF---ETNYKEVSKIYDQMQRAGLQP 269
K A+ + M E+ VQ Y +L+ N + KI++ M+ G+ P
Sbjct: 1232 GLCKKRMLPAAKNILEEMLEKNVQPDEFVYATLIDGFIRSENLGDARKIFEFMEHKGVCP 1291
Query: 270 DVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVF 329
D+VS +I Y + EA+ M G P Y ++ +A G ++ A
Sbjct: 1292 DIVSCNAMIKGYCQFGMMSEAILCMSNMRKVGCIPDEFTYTTVISGYAKQGNLNGALRWL 1351
Query: 330 KCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKV 389
M + +C P++ +Y+++++ Y D + AE F ++ + PNV+TY LI K
Sbjct: 1352 CDMIKRKCKPNVVTYSSLINGYCKTGDTDSAEGLFANMQAEALSPNVVTYTILIGSLFKK 1411
Query: 390 NNLEKMMEIYDKMRVNGIKPNQTIFTTIMDA 420
+ + + ++ M +N PN +++
Sbjct: 1412 DKVLRAGLYFETMLLNHCSPNDVTLHYLVNG 1442
Score = 102 bits (253), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 81/347 (23%), Positives = 144/347 (41%), Gaps = 7/347 (2%)
Query: 112 FNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSS-GPRPSALTYQ 170
F+ + L M+ G AP+ AL+ AY G A + R++ G P
Sbjct: 888 FDAVDDTLQSMSLAGAAPTRACLGALVAAYADAGMLGKATEMCERVREQYGSLPEVTHCN 947
Query: 171 IILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALM 230
+LKL VE ++ +A +++ +L ++ + + + ++ E+ KL
Sbjct: 948 RLLKLLVEQRRWDDARKLYDEMLGKDSGADNYSTCVLVRGLCLERRV---EEGLKLIEAR 1004
Query: 231 AERGVQQSTVTYNSLMSFETNYKEVSK---IYDQMQRAGLQPDVVSYALLINAYGKARRE 287
G V YN L+ ++ + + +M+ G P +V+Y LIN GK
Sbjct: 1005 WGAGCIPHVVFYNVLIDGYCRRGDMGRGLLLLGEMETNGFLPTLVTYGSLINWLGKKGDL 1064
Query: 288 EEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTM 347
E+ ++F EM G P + YN ++DA QA + K M C PDI ++ T+
Sbjct: 1065 EKIGSLFLEMRKRGFSPNVQIYNSVIDALCNCRSATQAMVILKQMFASGCDPDIITFNTL 1124
Query: 348 LSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGI 407
++ + + AE F R + PN ++Y LI G+ L ++ +M G
Sbjct: 1125 ITGLCHEGHVRKAEHFLREAIRRELNPNQLSYTPLIHGFCMRGELMVASDLLVEMMGRGH 1184
Query: 408 KPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLS 454
P+ F ++ A++ ++M PD N+L+S
Sbjct: 1185 TPDVVTFGALIHGLVVAGKVSEALIVREKMTERQVFPDVNIYNVLIS 1231
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 71/369 (19%), Positives = 160/369 (43%), Gaps = 21/369 (5%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N++ + LI + +G+ A +L M +G+ P VV+ AL+ G+ A +
Sbjct: 1152 NQLSYTPLIHGFCMRGELMVASDLLVEMMGRGHTPDVVTFGALIHGLVVAGKVSEALIVR 1211
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
+M P Y +++ + A+ + +L++ ++PD+ ++ +I +
Sbjct: 1212 EKMTERQVFPDVNIYNVLISGLCKKRMLPAAKNILEEMLEKN---VQPDEFVYATLIDGF 1268
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSK---IYDQMQRAGLQPDV 271
++ ARK+F M +GV V+ N+++ + +S+ M++ G PD
Sbjct: 1269 IRSENLGDARKIFEFMEHKGVCPDIVSCNAMIKGYCQFGMMSEAILCMSNMRKVGCIPDE 1328
Query: 272 VSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKC 331
+Y +I+ Y K AL +M+ +P Y+ L++ + +G D A +F
Sbjct: 1329 FTYTTVISGYAKQGNLNGALRWLCDMIKRKCKPNVVTYSSLINGYCKTGDTDSAEGLFAN 1388
Query: 332 MRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGY----- 386
M+ + SP++ +YT ++ + + A +F + + PN +T L+ G
Sbjct: 1389 MQAEALSPNVVTYTILIGSLFKKDKVLRAGLYFETMLLNHCSPNDVTLHYLVNGLTSCTP 1448
Query: 387 ----------AKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKE 436
++V+ + ++ ++ K+ + P + + I+ + ++ A+ +
Sbjct: 1449 CVINSICCNTSEVHGKDALLVVFKKLVFDIGDPRNSAYNAIIFSLCRHNMLREALDFKNR 1508
Query: 437 MESCGFPPD 445
M G+ P+
Sbjct: 1509 MAKKGYVPN 1517
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 71/307 (23%), Positives = 129/307 (42%), Gaps = 21/307 (6%)
Query: 101 MLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSS 160
+LI+ K+ A+ +L M +K P + L++ + R +A IF M+
Sbjct: 1228 VLISGLCKKRMLPAAKNILEEMLEKNVQPDEFVYATLIDGFIRSENLGDARKIFEFMEHK 1287
Query: 161 GPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGY 220
G P ++ ++K + + F E + + + K PD+ + +I Y K G
Sbjct: 1288 GVCPDIVSCNAMIKGYCQ---FGMMSEAILCMSNMRKVGCIPDEFTYTTVISGYAKQGNL 1344
Query: 221 EKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSK---IYDQMQRAGLQPDVVSYALL 277
A + M +R + + VTY+SL++ + ++ MQ L P+VV+Y +L
Sbjct: 1345 NGALRWLCDMIKRKCKPNVVTYSSLINGYCKTGDTDSAEGLFANMQAEALSPNVVTYTIL 1404
Query: 278 INAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAF------AISGMV--------- 322
I + K + A FE ML P + L++ I+ +
Sbjct: 1405 IGSLFKKDKVLRAGLYFETMLLNHCSPNDVTLHYLVNGLTSCTPCVINSICCNTSEVHGK 1464
Query: 323 DQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTL 382
D VFK + D P +Y ++ + + + A F R+ + G+VPN IT+ +L
Sbjct: 1465 DALLVVFKKLVFDIGDPRNSAYNAIIFSLCRHNMLREALDFKNRMAKKGYVPNPITFLSL 1524
Query: 383 IKGYAKV 389
+ G+ V
Sbjct: 1525 LYGFCSV 1531
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/231 (21%), Positives = 84/231 (36%), Gaps = 1/231 (0%)
Query: 252 YKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDA-GVRPTHKAYN 310
+ V M AG P L+ AY A +A + E + + G P N
Sbjct: 888 FDAVDDTLQSMSLAGAAPTRACLGALVAAYADAGMLGKATEMCERVREQYGSLPEVTHCN 947
Query: 311 ILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQD 370
LL D AR ++ M D S ++ +E K
Sbjct: 948 RLLKLLVEQRRWDDARKLYDEMLGKDSGADNYSTCVLVRGLCLERRVEEGLKLIEARWGA 1007
Query: 371 GFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSA 430
G +P+V+ Y LI GY + ++ + + + +M NG P + ++++ GK D +
Sbjct: 1008 GCIPHVVFYNVLIDGYCRRGDMGRGLLLLGEMETNGFLPTLVTYGSLINWLGKKGDLEKI 1067
Query: 431 VVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGI 481
+ EM GF P+ + N ++ +A +L +P I
Sbjct: 1068 GSLFLEMRKRGFSPNVQIYNSVIDALCNCRSATQAMVILKQMFASGCDPDI 1118
>gi|53793262|dbj|BAD54485.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
Length = 713
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 109/426 (25%), Positives = 185/426 (43%), Gaps = 48/426 (11%)
Query: 67 LVRLKQLKKWNVVSEVLEWLRIQSWWDFN-EMDFLMLITAYGKQGDFNKAEKVLSFMNKK 125
L+RL + + +V + E L + + FN +DFL K+G+ +A + S M +
Sbjct: 164 LLRLARDRSGRLVRRLFEQLPAPNVFTFNIVIDFLC------KEGELAEARSLFSRMKEM 217
Query: 126 GYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEA 185
G P VV+ +L++ YG+ G E + M+ SG + +TY ++ F + + + A
Sbjct: 218 GCLPDVVTFNSLIDGYGKCGELDEVEQLVEEMRRSGCKADVVTYNALINCFCKFGRMETA 277
Query: 186 EEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSL 245
F + ++ + + F + + K G +A KLFA M RG+ + TY L
Sbjct: 278 YGYFAAM---KREGVMANVVTFSTFVDAFCKEGLVREAMKLFAQMRVRGMALNEFTYTCL 334
Query: 246 MSFETNYKEVSK---IYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGV 302
+ + + D+M R G+ +VV+Y +L++ K R+ EA V M AGV
Sbjct: 335 IDGTCKAGRLDDAIVLLDEMVRQGVPLNVVTYTVLVDGLCKERKVAEAEDVLRMMEKAGV 394
Query: 303 RPTHKAYNILLDAF------------------------------AISGM-----VDQART 327
R Y L+ I G+ +D+A++
Sbjct: 395 RANELLYTTLIHGHFMNKNSEKALGLLSEMKNKGLELDISLYGALIQGLCNVHKLDEAKS 454
Query: 328 VFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYA 387
+ M P+ YTTM+ A + + A +++ GF PNVITY LI G
Sbjct: 455 LLTKMDESGLEPNYIIYTTMMDACFKSGKVPEAIAMLQKILDSGFQPNVITYCALIDGLC 514
Query: 388 KVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQK 447
K ++++ + ++KMR G+ PN +T ++D KN + AV + EM G D+
Sbjct: 515 KAGSIDEAISHFNKMRDLGLDPNVQAYTALVDGLCKNGCLNEAVQLFNEMVHKGMSLDKV 574
Query: 448 AKNILL 453
LL
Sbjct: 575 VYTALL 580
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 86/363 (23%), Positives = 171/363 (47%), Gaps = 6/363 (1%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + F + A+ K+G +A K+ + M +G A + ++T L++ + GR +A +
Sbjct: 292 NVVTFSTFVDAFCKEGLVREAMKLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIVLL 351
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
M G + +TY +++ + K EAE+V + EK+ ++ ++ ++ +I+ +
Sbjct: 352 DEMVRQGVPLNVVTYTVLVDGLCKERKVAEAEDVLRMM---EKAGVRANELLYTTLIHGH 408
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYK---EVSKIYDQMQRAGLQPDV 271
EKA L + M +G++ Y +L+ N E + +M +GL+P+
Sbjct: 409 FMNKNSEKALGLLSEMKNKGLELDISLYGALIQGLCNVHKLDEAKSLLTKMDESGLEPNY 468
Query: 272 VSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKC 331
+ Y +++A K+ + EA+A+ +++LD+G +P Y L+D +G +D+A + F
Sbjct: 469 IIYTTMMDACFKSGKVPEAIAMLQKILDSGFQPNVITYCALIDGLCKAGSIDEAISHFNK 528
Query: 332 MRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNN 391
MR P++ +YT ++ + A + F + G + + Y L+ GY K N
Sbjct: 529 MRDLGLDPNVQAYTALVDGLCKNGCLNEAVQLFNEMVHKGMSLDKVVYTALLDGYLKQGN 588
Query: 392 LEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNI 451
L + KM +G++ + +T + + A + EM G PD+ N
Sbjct: 589 LHDAFALKAKMIDSGLQLDLFCYTCFISGFCNLNMMPEAREVFSEMIGHGIAPDRAVYNC 648
Query: 452 LLS 454
L+S
Sbjct: 649 LIS 651
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 86/349 (24%), Positives = 167/349 (47%), Gaps = 8/349 (2%)
Query: 94 FNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAI 153
NE + LI K G + A +L M ++G +VV++T L++ + + AE +
Sbjct: 326 LNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQGVPLNVVTYTVLVDGLCKERKVAEAEDV 385
Query: 154 FRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSP-LKPDQKMFHMMIY 212
R M+ +G R + L Y + + + + E + LL E K+ L+ D ++ +I
Sbjct: 386 LRMMEKAGVRANELLYTTL----IHGHFMNKNSEKALGLLSEMKNKGLELDISLYGALIQ 441
Query: 213 MYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSKIYDQMQR---AGLQP 269
++A+ L M E G++ + + Y ++M +V + +Q+ +G QP
Sbjct: 442 GLCNVHKLDEAKSLLTKMDESGLEPNYIIYTTMMDACFKSGKVPEAIAMLQKILDSGFQP 501
Query: 270 DVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVF 329
+V++Y LI+ KA +EA++ F +M D G+ P +AY L+D +G +++A +F
Sbjct: 502 NVITYCALIDGLCKAGSIDEAISHFNKMRDLGLDPNVQAYTALVDGLCKNGCLNEAVQLF 561
Query: 330 KCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKV 389
M S D YT +L Y+ ++ A ++ G ++ Y I G+ +
Sbjct: 562 NEMVHKGMSLDKVVYTALLDGYLKQGNLHDAFALKAKMIDSGLQLDLFCYTCFISGFCNL 621
Query: 390 NNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEME 438
N + + E++ +M +GI P++ ++ ++ Y K + + A+ EME
Sbjct: 622 NMMPEAREVFSEMIGHGIAPDRAVYNCLISKYQKLGNLEEAISLQDEME 670
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 77/281 (27%), Positives = 132/281 (46%), Gaps = 3/281 (1%)
Query: 202 PDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLM---SFETNYKEVSKI 258
P+ F+++I K G +AR LF+ M E G VT+NSL+ EV ++
Sbjct: 186 PNVFTFNIVIDFLCKEGELAEARSLFSRMKEMGCLPDVVTFNSLIDGYGKCGELDEVEQL 245
Query: 259 YDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAI 318
++M+R+G + DVV+Y LIN + K R E A F M GV ++ +DAF
Sbjct: 246 VEEMRRSGCKADVVTYNALINCFCKFGRMETAYGYFAAMKREGVMANVVTFSTFVDAFCK 305
Query: 319 SGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVIT 378
G+V +A +F MR + + +YT ++ A ++ A + + G NV+T
Sbjct: 306 EGLVREAMKLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQGVPLNVVT 365
Query: 379 YGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEME 438
Y L+ G K + + ++ M G++ N+ ++TT++ + NK+ + A+ EM+
Sbjct: 366 YTVLVDGLCKERKVAEAEDVLRMMEKAGVRANELLYTTLIHGHFMNKNSEKALGLLSEMK 425
Query: 439 SCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEP 479
+ G D L+ + +EA LL + EP
Sbjct: 426 NKGLELDISLYGALIQGLCNVHKLDEAKSLLTKMDESGLEP 466
Score = 58.5 bits (140), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 64/135 (47%), Gaps = 3/135 (2%)
Query: 92 WDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAE 151
D N + L+ K G N+A ++ + M KG + V +TAL++ Y + G +A
Sbjct: 534 LDPNVQAYTALVDGLCKNGCLNEAVQLFNEMVHKGMSLDKVVYTALLDGYLKQGNLHDAF 593
Query: 152 AIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMI 211
A+ +M SG + Y + F N EA EVF ++ + PD+ +++ +I
Sbjct: 594 ALKAKMIDSGLQLDLFCYTCFISGFCNLNMMPEAREVFSEMIGHG---IAPDRAVYNCLI 650
Query: 212 YMYKKAGGYEKARKL 226
Y+K G E+A L
Sbjct: 651 SKYQKLGNLEEAISL 665
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 53/228 (23%), Positives = 88/228 (38%), Gaps = 43/228 (18%)
Query: 75 KWNVVSEVLEWLR--IQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVV 132
K V E + L+ + S + N + + LI K G ++A + M G P+V
Sbjct: 480 KSGKVPEAIAMLQKILDSGFQPNVITYCALIDGLCKAGSIDEAISHFNKMRDLGLDPNVQ 539
Query: 133 SHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTL 192
++TAL++ + G A +F M G M+L
Sbjct: 540 AYTALVDGLCKNGCLNEAVQLFNEMVHKG----------------------------MSL 571
Query: 193 LDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNY 252
D+ ++ ++ Y K G A L A M + G+Q Y +S N
Sbjct: 572 ----------DKVVYTALLDGYLKQGNLHDAFALKAKMIDSGLQLDLFCYTCFISGFCNL 621
Query: 253 K---EVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEM 297
E +++ +M G+ PD Y LI+ Y K EEA+++ +EM
Sbjct: 622 NMMPEAREVFSEMIGHGIAPDRAVYNCLISKYQKLGNLEEAISLQDEM 669
>gi|302826367|ref|XP_002994672.1| hypothetical protein SELMODRAFT_432576 [Selaginella moellendorffii]
gi|300137182|gb|EFJ04264.1| hypothetical protein SELMODRAFT_432576 [Selaginella moellendorffii]
Length = 816
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 96/416 (23%), Positives = 172/416 (41%), Gaps = 50/416 (12%)
Query: 101 MLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSS 160
++I + ++A ++ MN++ +P S+ L++ + G+ +A +F+++ S
Sbjct: 293 IVILGLCQNDRIDEAVQMFEKMNERNVSPDSWSYGILIDGLAKAGKLNDARNLFQKLLHS 352
Query: 161 GPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGY 220
G PS + Y ++ AN F +A E+F D + P +++MI K G
Sbjct: 353 GVTPSTVAYTSLIHGLCMANSFDDARELFA---DMNRRGCPPSPVTYNVMIDASCKRGML 409
Query: 221 EKARKLFALMAERGVQQSTVTYNSLM---SFETNYKEVSKIYDQMQRAGLQP-------- 269
E+A L M E G VTYN++M + +E ++++M+R G P
Sbjct: 410 EEACDLIKKMIEDGHVPDVVTYNTVMDGLCKSSRVEEALLLFNEMERLGCTPNRRSHNTI 469
Query: 270 ------------------------------------DVVSYALLINAYGKARREEEALAV 293
DVV+Y+ LI+ R ++A +
Sbjct: 470 ILGLCQQSKIDQACQRGKLDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHL 529
Query: 294 FEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVN 353
E+M+ +PT N L+ +G + +AR V M SPD+ +Y T++ +
Sbjct: 530 LEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCR 589
Query: 354 ASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTI 413
A E A + + G PNV+TY L+ G K N L + ++ +M+ +G PN
Sbjct: 590 AGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCAPNLFT 649
Query: 414 FTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELL 469
+T ++ + D + + EM G PD L + + A E+L
Sbjct: 650 YTALILGFCSAGQVDGGLKLFGEMVCAGISPDHVVYGTLAAELCKSGRSARALEIL 705
Score = 132 bits (331), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 103/399 (25%), Positives = 177/399 (44%), Gaps = 21/399 (5%)
Query: 101 MLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF--RRMQ 158
+L+ + +G +KA ++L M + AP VS+ +++ + GR + A +F R +
Sbjct: 217 VLLEGFCSRGQVDKARELLRAMPDEECAPDEVSYCTVLDGLCKAGRVEEAVRLFGDRELP 276
Query: 159 SSGPRPSALT----YQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
SS S+ Y I++ + ++ EA ++F + + SP D + ++I
Sbjct: 277 SSSSSSSSPPSLRGYNIVILGLCQNDRIDEAVQMFEKMNERNVSP---DSWSYGILIDGL 333
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSL---MSFETNYKEVSKIYDQMQRAGLQPDV 271
KAG AR LF + GV STV Y SL + ++ + +++ M R G P
Sbjct: 334 AKAGKLNDARNLFQKLLHSGVTPSTVAYTSLIHGLCMANSFDDARELFADMNRRGCPPSP 393
Query: 272 VSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKC 331
V+Y ++I+A K EEA + ++M++ G P YN ++D S V++A +F
Sbjct: 394 VTYNVMIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGLCKSSRVEEALLLFNE 453
Query: 332 MRRDRCSPDICSYTTMLSAYVNASDMEGAE---------KFFRRLKQDGFVPNVITYGTL 382
M R C+P+ S+ T++ S ++ A + +R+ DG VP+V+TY TL
Sbjct: 454 MERLGCTPNRRSHNTIILGLCQQSKIDQACQRGKLDEAFRLLKRMTDDGHVPDVVTYSTL 513
Query: 383 IKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGF 442
I G + ++ + + M KP T++ K A M S G
Sbjct: 514 ISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQ 573
Query: 443 PPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGI 481
PD N L+ A + A ELL + P +
Sbjct: 574 SPDVVTYNTLVHGHCRAGQTERARELLSDMVARGLAPNV 612
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 79/342 (23%), Positives = 162/342 (47%), Gaps = 15/342 (4%)
Query: 88 IQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRY 147
+ S + + + LI F+ A ++ + MN++G PS V++ +++A + G
Sbjct: 350 LHSGVTPSTVAYTSLIHGLCMANSFDDARELFADMNRRGCPPSPVTYNVMIDASCKRGML 409
Query: 148 KNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMF 207
+ A + ++M G P +TY ++ ++++ +EA +F + E+ P+++
Sbjct: 410 EEACDLIKKMIEDGHVPDVVTYNTVMDGLCKSSRVEEALLLFNEM---ERLGCTPNRRSH 466
Query: 208 HMMIY---------MYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEV--- 255
+ +I + G ++A +L M + G VTY++L+S + V
Sbjct: 467 NTIILGLCQQSKIDQACQRGKLDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDA 526
Query: 256 SKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDA 315
+ + M + +P VV+ LI+ KA R +EA V + M+ +G P YN L+
Sbjct: 527 RHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHG 586
Query: 316 FAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPN 375
+G ++AR + M +P++ +YT ++S A+ + A F ++K G PN
Sbjct: 587 HCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCAPN 646
Query: 376 VITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTI 417
+ TY LI G+ ++ ++++ +M GI P+ ++ T+
Sbjct: 647 LFTYTALILGFCSAGQVDGGLKLFGEMVCAGISPDHVVYGTL 688
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 98/419 (23%), Positives = 188/419 (44%), Gaps = 29/419 (6%)
Query: 81 EVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEA 140
++LE + + + +N +++ A K + A ++ M++K + S +++
Sbjct: 135 QLLEIMPVANSSAYN-----IVVVALCKAARVDDALELARTMSEKRIPLAAGSLDSVLVG 189
Query: 141 YGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPL 200
GR A ++R + P +T ++L+ F + +A E+ + DEE +P
Sbjct: 190 LMDSGRIDEALQVYRENRRE---PCLVTLNVLLEGFCSRGQVDKARELLRAMPDEECAP- 245
Query: 201 KPDQKMFHMMIYMYKKAGGYEKARKLFA------LMAERGVQQSTVTYN-SLMSFETNYK 253
D+ + ++ KAG E+A +LF + S YN ++ N +
Sbjct: 246 --DEVSYCTVLDGLCKAGRVEEAVRLFGDRELPSSSSSSSSPPSLRGYNIVILGLCQNDR 303
Query: 254 --EVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNI 311
E +++++M + PD SY +LI+ KA + +A +F+++L +GV P+ AY
Sbjct: 304 IDEAVQMFEKMNERNVSPDSWSYGILIDGLAKAGKLNDARNLFQKLLHSGVTPSTVAYTS 363
Query: 312 LLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDG 371
L+ ++ D AR +F M R C P +Y M+ A +E A +++ +DG
Sbjct: 364 LIHGLCMANSFDDARELFADMNRRGCPPSPVTYNVMIDASCKRGMLEEACDLIKKMIEDG 423
Query: 372 FVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTI---------MDAYG 422
VP+V+TY T++ G K + +E+ + ++++M G PN+ TI +D
Sbjct: 424 HVPDVVTYNTVMDGLCKSSRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQAC 483
Query: 423 KNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGI 481
+ D A K M G PD + L+S + ++A LL + +P +
Sbjct: 484 QRGKLDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHLLEDMVKRQCKPTV 542
Score = 118 bits (295), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 76/312 (24%), Positives = 142/312 (45%), Gaps = 9/312 (2%)
Query: 101 MLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSS 160
++I A K+G +A ++ M + G+ P VV++ +M+ + R + A +F M+
Sbjct: 398 VMIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGLCKSSRVEEALLLFNEMERL 457
Query: 161 GPRPSALTYQIILKLFVEANKFKEA------EEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
G P+ ++ I+ + +K +A +E F L PD + +I
Sbjct: 458 GCTPNRRSHNTIILGLCQQSKIDQACQRGKLDEAFRLLKRMTDDGHVPDVVTYSTLISGL 517
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSL---MSFETNYKEVSKIYDQMQRAGLQPDV 271
+ AR L M +R + + VT N+L + KE ++ D M +G PDV
Sbjct: 518 CSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDV 577
Query: 272 VSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKC 331
V+Y L++ + +A + E A + +M+ G+ P Y L+ + + +A VF
Sbjct: 578 VTYNTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQ 637
Query: 332 MRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNN 391
M+ C+P++ +YT ++ + +A ++G K F + G P+ + YGTL K
Sbjct: 638 MKSSGCAPNLFTYTALILGFCSAGQVDGGLKLFGEMVCAGISPDHVVYGTLAAELCKSGR 697
Query: 392 LEKMMEIYDKMR 403
+ +EI + R
Sbjct: 698 SARALEILREGR 709
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 86/425 (20%), Positives = 160/425 (37%), Gaps = 51/425 (12%)
Query: 99 FLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQ 158
F +I + G +A K+ S M ++ ++P + L+++ + + + + + M
Sbjct: 13 FTSVIQGWCNVGRTFEAVKIFSLM-EECHSPYPDVYNVLIDSLSKRQETEAVKKMVQVMV 71
Query: 159 SSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQ-KMFHMMIYMYKKA 217
G P + T+ IL +A K EAE V +DE +S + P + +
Sbjct: 72 DRGCFPDSFTFTTILCGLCKAGKMDEAELV----MDEMRSRMIPPYFATSSFLAHELCLR 127
Query: 218 GGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSKIYDQMQRAGLQPDVVSYALL 277
G E+A +L +M + +L + ++ M + S +
Sbjct: 128 GSMERAFQLLEIMPVANSSAYNIVVVALCK-AARVDDALELARTMSEKRIPLAAGSLDSV 186
Query: 278 INAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRC 337
+ + R +EAL V+ E P N+LL+ F G VD+AR + + M + C
Sbjct: 187 LVGLMDSGRIDEALQVYRENRR---EPCLVTLNVLLEGFCSRGQVDKARELLRAMPDEEC 243
Query: 338 SPDICSYTTMLSAYVNASDMEGAEKFF--------------------------------- 364
+PD SY T+L A +E A + F
Sbjct: 244 APDEVSYCTVLDGLCKAGRVEEAVRLFGDRELPSSSSSSSSPPSLRGYNIVILGLCQNDR 303
Query: 365 --------RRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTT 416
++ + P+ +YG LI G AK L ++ K+ +G+ P+ +T+
Sbjct: 304 IDEAVQMFEKMNERNVSPDSWSYGILIDGLAKAGKLNDARNLFQKLLHSGVTPSTVAYTS 363
Query: 417 IMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPN 476
++ FD A + +M G PP N+++ + EA +L+
Sbjct: 364 LIHGLCMANSFDDARELFADMNRRGCPPSPVTYNVMIDASCKRGMLEEACDLIKKMIEDG 423
Query: 477 NEPGI 481
+ P +
Sbjct: 424 HVPDV 428
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 103/226 (45%), Gaps = 13/226 (5%)
Query: 81 EVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEA 140
EVL+ + + S + + + L+ + + G +A ++LS M +G AP+VV++TAL+
Sbjct: 563 EVLDAM-VSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSG 621
Query: 141 YGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPL 200
+ R A +F +M+SSG P+ TY ++ F A + ++F ++ + +
Sbjct: 622 LCKANRLPEACGVFAQMKSSGCAPNLFTYTALILGFCSAGQVDGGLKLFGEMV---CAGI 678
Query: 201 KPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETN-YKEVSKI- 258
PD ++ + K+G AR L L R +S + + F + E K+
Sbjct: 679 SPDHVVYGTLAAELCKSG--RSARALEILREGRESLRSEAWGDEVYRFAVDGLLEAGKME 736
Query: 259 -----YDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLD 299
M R G P A L+ K+ + EA AV EE++D
Sbjct: 737 MALGFVRDMVRGGQLPAPERCASLVAGLCKSGQGGEARAVLEEIMD 782
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 70/332 (21%), Positives = 143/332 (43%), Gaps = 20/332 (6%)
Query: 157 MQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKK 216
M G P+ L + +++ + + EA ++F +L++E SP PD +++++I K
Sbjct: 1 MFQQGIFPAPLLFTSVIQGWCNVGRTFEAVKIF-SLMEECHSPY-PD--VYNVLIDSLSK 56
Query: 217 AGGYEKARKLFALMAERGVQQSTVTYNSLMSFETN---YKEVSKIYDQMQRAGLQPDVVS 273
E +K+ +M +RG + T+ +++ E + D+M+ + P +
Sbjct: 57 RQETEAVKKMVQVMVDRGCFPDSFTFTTILCGLCKAGKMDEAELVMDEMRSRMIPPYFAT 116
Query: 274 YALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMR 333
+ L + E A + E M A AYNI++ A + VD A + + M
Sbjct: 117 SSFLAHELCLRGSMERAFQLLEIMPVA----NSSAYNIVVVALCKAARVDDALELARTMS 172
Query: 334 RDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLE 393
R S ++L +++ ++ A + +R +++ P ++T L++G+ ++
Sbjct: 173 EKRIPLAAGSLDSVLVGLMDSGRIDEALQVYRENRRE---PCLVTLNVLLEGFCSRGQVD 229
Query: 394 KMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEME------SCGFPPDQK 447
K E+ M P++ + T++D K + AV + + E S PP +
Sbjct: 230 KARELLRAMPDEECAPDEVSYCTVLDGLCKAGRVEEAVRLFGDRELPSSSSSSSSPPSLR 289
Query: 448 AKNILLSLAKTADERNEANELLGNFNHPNNEP 479
NI++ D +EA ++ N N P
Sbjct: 290 GYNIVILGLCQNDRIDEAVQMFEKMNERNVSP 321
>gi|297823043|ref|XP_002879404.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297325243|gb|EFH55663.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 605
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 93/355 (26%), Positives = 163/355 (45%), Gaps = 6/355 (1%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
+I AY K DF+ EK+L M K G + V++T L+E + G+ + E +F M+ G
Sbjct: 246 IINAYLKHRDFSGVEKILKVMKKDGVVYNKVTYTLLIELSVKNGKMNDVEKLFDEMRERG 305
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
Y ++ K A F+ + + L P + +I K G
Sbjct: 306 IESDIHVYTSLISWNCRKGNIKRA---FLLFDELTEKGLLPSSHTYGALIDGVCKVGEMG 362
Query: 222 KARKLFALMAERGVQQSTVTYNSLMSFETN---YKEVSKIYDQMQRAGLQPDVVSYALLI 278
A L M +GV + V +N+L++ E S IYD M++ G Q DV + +
Sbjct: 363 AAEILMNEMQSKGVNITQVVFNTLINGYCRKGMIDEASMIYDVMEKKGFQADVFTCNTIA 422
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCS 338
+ + + +R +EA M++ GVR + +Y L+D + G V++A+ +F M
Sbjct: 423 SCFNRLKRYDEAKQWLFRMMEGGVRLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKEVQ 482
Query: 339 PDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEI 398
P+ +Y M+ AY ++ A K + +K +G P+ TY +LI G +N+++ M +
Sbjct: 483 PNAITYNVMIYAYCKQGKVKEARKLWANMKANGMDPDSYTYTSLIHGECIADNVDEAMRL 542
Query: 399 YDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILL 453
+ +M + G+ N +T ++ K D A Y E++ G+ D K L+
Sbjct: 543 FSEMGLKGLDQNSVTYTVMISGLSKAGKSDEAFGLYDEIKRKGYTIDNKVYTALI 597
Score = 128 bits (322), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 91/394 (23%), Positives = 172/394 (43%), Gaps = 13/394 (3%)
Query: 94 FNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAI 153
+E ++ + A K+ + + M G +V S T ++E R G + ++ +
Sbjct: 168 IDERSCIVFLVAAKKRRRIDLCLEFFRRMVDSGVKITVYSLTIVVEGLCRRGEVEKSKKL 227
Query: 154 FRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYM 213
+ G +P A TY I+ +++ F E++ + +K + ++ + ++I +
Sbjct: 228 IKEFSGKGIKPEAYTYNTIINAYLKHRDFSGVEKILKVM---KKDGVVYNKVTYTLLIEL 284
Query: 214 YKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFET---NYKEVSKIYDQMQRAGLQPD 270
K G KLF M ERG++ Y SL+S+ N K ++D++ GL P
Sbjct: 285 SVKNGKMNDVEKLFDEMRERGIESDIHVYTSLISWNCRKGNIKRAFLLFDELTEKGLLPS 344
Query: 271 VVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFK 330
+Y LI+ K A + EM GV T +N L++ + GM+D+A ++
Sbjct: 345 SHTYGALIDGVCKVGEMGAAEILMNEMQSKGVNITQVVFNTLINGYCRKGMIDEASMIYD 404
Query: 331 CMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVN 390
M + D+ + T+ S + + A+++ R+ + G + ++Y LI Y K
Sbjct: 405 VMEKKGFQADVFTCNTIASCFNRLKRYDEAKQWLFRMMEGGVRLSTVSYTNLIDVYCKEG 464
Query: 391 NLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKN 450
N+E+ ++ +M ++PN + ++ AY K A + M++ G PD
Sbjct: 465 NVEEAKRLFVEMSSKEVQPNAITYNVMIYAYCKQGKVKEARKLWANMKANGMDPDSYTYT 524
Query: 451 ILLSLAKTADERNEANELLGNFNHPNNEPGINGL 484
L+ AD +EA L +E G+ GL
Sbjct: 525 SLIHGECIADNVDEAMRLF-------SEMGLKGL 551
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 72/304 (23%), Positives = 134/304 (44%), Gaps = 6/304 (1%)
Query: 169 YQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFA 228
+ ++ +++V+ F+E VF ++ K L D++ + + KK + + F
Sbjct: 138 FDLVFRVYVDNGMFEEGLRVFDYMV---KKGLSIDERSCIVFLVAAKKRRRIDLCLEFFR 194
Query: 229 LMAERGVQQSTVTYNSLMSFETNYKEV---SKIYDQMQRAGLQPDVVSYALLINAYGKAR 285
M + GV+ + + ++ EV K+ + G++P+ +Y +INAY K R
Sbjct: 195 RMVDSGVKITVYSLTIVVEGLCRRGEVEKSKKLIKEFSGKGIKPEAYTYNTIINAYLKHR 254
Query: 286 REEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYT 345
+ + M GV Y +L++ +G ++ +F MR DI YT
Sbjct: 255 DFSGVEKILKVMKKDGVVYNKVTYTLLIELSVKNGKMNDVEKLFDEMRERGIESDIHVYT 314
Query: 346 TMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVN 405
+++S +++ A F L + G +P+ TYG LI G KV + + ++M+
Sbjct: 315 SLISWNCRKGNIKRAFLLFDELTEKGLLPSSHTYGALIDGVCKVGEMGAAEILMNEMQSK 374
Query: 406 GIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEA 465
G+ Q +F T+++ Y + D A + Y ME GF D N + S +EA
Sbjct: 375 GVNITQVVFNTLINGYCRKGMIDEASMIYDVMEKKGFQADVFTCNTIASCFNRLKRYDEA 434
Query: 466 NELL 469
+ L
Sbjct: 435 KQWL 438
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 62/252 (24%), Positives = 117/252 (46%), Gaps = 6/252 (2%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
LI K G+ AE +++ M KG + V L+ Y R G A I+ M+ G
Sbjct: 351 LIDGVCKVGEMGAAEILMNEMQSKGVNITQVVFNTLINGYCRKGMIDEASMIYDVMEKKG 410
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
+ T I F ++ EA++ +++ ++ + +I +Y K G E
Sbjct: 411 FQADVFTCNTIASCFNRLKRYDEAKQWLFRMME---GGVRLSTVSYTNLIDVYCKEGNVE 467
Query: 222 KARKLFALMAERGVQQSTVTYNSLM---SFETNYKEVSKIYDQMQRAGLQPDVVSYALLI 278
+A++LF M+ + VQ + +TYN ++ + KE K++ M+ G+ PD +Y LI
Sbjct: 468 EAKRLFVEMSSKEVQPNAITYNVMIYAYCKQGKVKEARKLWANMKANGMDPDSYTYTSLI 527
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCS 338
+ A +EA+ +F EM G+ Y +++ + +G D+A ++ ++R +
Sbjct: 528 HGECIADNVDEAMRLFSEMGLKGLDQNSVTYTVMISGLSKAGKSDEAFGLYDEIKRKGYT 587
Query: 339 PDICSYTTMLSA 350
D YT ++ +
Sbjct: 588 IDNKVYTALIGS 599
>gi|255764587|gb|ACU33853.1| PPR1 protein [Capsicum annuum]
Length = 577
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 92/404 (22%), Positives = 202/404 (50%), Gaps = 10/404 (2%)
Query: 59 PKDLVLGTLVRLKQLKKWNVVSEVLEWLRI--QSWWDFNEMDFLMLITAYGKQGDFNKAE 116
P +++ GT+ + L K + L LRI Q + + ++I A K + + A
Sbjct: 166 PNEVMYGTV--MNGLSKRGHTEKTLSLLRIMEQGNTKPDVRTYSIVIDALCKDINLDAAI 223
Query: 117 KVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLF 176
+L+ M +K P++ ++ +L++ + G+++ + + M + P+ T+ I++
Sbjct: 224 NLLNEMKQKNIPPNIFTYNSLIDGLCKLGQWEKVKTLLSEMVNLNINPNVHTFSILIDGL 283
Query: 177 VEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQ 236
+ K ++A+EV ++++ ++PD + ++ Y G ++AR++F ++ ++G++
Sbjct: 284 CKEGKVEDADEVMRHMIEKG---VEPDIITYSAIMDGYCLRGQVDRARRVFNVLRDKGIK 340
Query: 237 QSTVTYNSLMSFETNYKEVSK---IYDQMQRAGLQPDVVSYALLINAYGKARREEEALAV 293
+ +Y+ L++ K ++K ++ ++ + GL+PD V+Y+ +++ + R +A +
Sbjct: 341 PNIFSYSILINGYCKKKNLAKAMQLFGEISQKGLKPDTVTYSTILHGLIEVGRIGDAKKI 400
Query: 294 FEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVN 353
F+EML G P ++ LL + G+V++A +F + R+R +I YT +++
Sbjct: 401 FDEMLRVGPTPDICLHSTLLFGYFKYGLVEEAMLLFSKLERNREDTNISFYTVVINGLCK 460
Query: 354 ASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTI 413
+ A F +L G +P+V TY +I G+ + +++ I KM NG N
Sbjct: 461 NDRVREAHAIFEKLPSIGLIPDVRTYNVMITGFCREGLFDEVKGILRKMEDNGCPANNIT 520
Query: 414 FTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAK 457
+ IM + ++ V + KEM GF D +L+++ K
Sbjct: 521 YNVIMQGFFRSNKISEIVSFMKEMAGRGFSFDATTTGVLINVLK 564
Score = 125 bits (315), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 88/391 (22%), Positives = 183/391 (46%), Gaps = 9/391 (2%)
Query: 53 TRGQPLPKDLVLGTLVR-LKQLKKWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGD 111
R +PLP + L + + +K ++ V + +RI ++ ++ +Y +
Sbjct: 54 VRMKPLPSVIDFSKLFKTMINMKHYSAVVSLFREMRILGI-PISDSILNIVTNSYCLRHR 112
Query: 112 FNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRM-QSSGPRPSALTYQ 170
+ A VL K G +VV+ L+ + +A +F+++ + P+ + Y
Sbjct: 113 IDCAFSVLPIYLKTGIPFNVVTFNTLLGGLFAENKVTDAVVLFKKLVREKICEPNEVMYG 172
Query: 171 IILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALM 230
++ +K E+ L E+ KPD + + ++I K + A L M
Sbjct: 173 TVMN---GLSKRGHTEKTLSLLRIMEQGNTKPDVRTYSIVIDALCKDINLDAAINLLNEM 229
Query: 231 AERGVQQSTVTYNSLMSFET---NYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARRE 287
++ + + TYNSL+ +++V + +M + P+V ++++LI+ K +
Sbjct: 230 KQKNIPPNIFTYNSLIDGLCKLGQWEKVKTLLSEMVNLNINPNVHTFSILIDGLCKEGKV 289
Query: 288 EEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTM 347
E+A V M++ GV P Y+ ++D + + G VD+AR VF +R P+I SY+ +
Sbjct: 290 EDADEVMRHMIEKGVEPDIITYSAIMDGYCLRGQVDRARRVFNVLRDKGIKPNIFSYSIL 349
Query: 348 LSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGI 407
++ Y ++ A + F + Q G P+ +TY T++ G +V + +I+D+M G
Sbjct: 350 INGYCKKKNLAKAMQLFGEISQKGLKPDTVTYSTILHGLIEVGRIGDAKKIFDEMLRVGP 409
Query: 408 KPNQTIFTTIMDAYGKNKDFDSAVVWYKEME 438
P+ + +T++ Y K + A++ + ++E
Sbjct: 410 TPDICLHSTLLFGYFKYGLVEEAMLLFSKLE 440
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 74/326 (22%), Positives = 155/326 (47%), Gaps = 6/326 (1%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
LI K G + K + +LS M P+V + + L++ + G+ ++A+ + R M G
Sbjct: 244 LIDGLCKLGQWEKVKTLLSEMVNLNINPNVHTFSILIDGLCKEGKVEDADEVMRHMIEKG 303
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
P +TY I+ + + A VF L D+ +KP+ + ++I Y K
Sbjct: 304 VEPDIITYSAIMDGYCLRGQVDRARRVFNVLRDKG---IKPNIFSYSILINGYCKKKNLA 360
Query: 222 KARKLFALMAERGVQQSTVTYNSLMSFETNYKEVS---KIYDQMQRAGLQPDVVSYALLI 278
KA +LF ++++G++ TVTY++++ + KI+D+M R G PD+ ++ L+
Sbjct: 361 KAMQLFGEISQKGLKPDTVTYSTILHGLIEVGRIGDAKKIFDEMLRVGPTPDICLHSTLL 420
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCS 338
Y K EEA+ +F ++ Y ++++ + V +A +F+ +
Sbjct: 421 FGYFKYGLVEEAMLLFSKLERNREDTNISFYTVVINGLCKNDRVREAHAIFEKLPSIGLI 480
Query: 339 PDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEI 398
PD+ +Y M++ + + + R+++ +G N ITY +++G+ + N + +++
Sbjct: 481 PDVRTYNVMITGFCREGLFDEVKGILRKMEDNGCPANNITYNVIMQGFFRSNKISEIVSF 540
Query: 399 YDKMRVNGIKPNQTIFTTIMDAYGKN 424
+M G + T +++ +N
Sbjct: 541 MKEMAGRGFSFDATTTGVLINVLKEN 566
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 68/337 (20%), Positives = 139/337 (41%), Gaps = 11/337 (3%)
Query: 149 NAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVF--MTLLDEEKSPLKPDQKM 206
+A ++F RM P PS + + + K + + +F M +L S +
Sbjct: 45 DAVSLFHRMVRMKPLPSVIDFSKLFKTMINMKHYSAVVSLFREMRILGIPIS-----DSI 99
Query: 207 FHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMS---FETNYKEVSKIYDQMQ 263
+++ Y + A + + + G+ + VT+N+L+ E + ++ ++
Sbjct: 100 LNIVTNSYCLRHRIDCAFSVLPIYLKTGIPFNVVTFNTLLGGLFAENKVTDAVVLFKKLV 159
Query: 264 RAGL-QPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMV 322
R + +P+ V Y ++N K E+ L++ M +P + Y+I++DA +
Sbjct: 160 REKICEPNEVMYGTVMNGLSKRGHTEKTLSLLRIMEQGNTKPDVRTYSIVIDALCKDINL 219
Query: 323 DQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTL 382
D A + M++ P+I +Y +++ E + + PNV T+ L
Sbjct: 220 DAAINLLNEMKQKNIPPNIFTYNSLIDGLCKLGQWEKVKTLLSEMVNLNINPNVHTFSIL 279
Query: 383 IKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGF 442
I G K +E E+ M G++P+ ++ IMD Y D A + + G
Sbjct: 280 IDGLCKEGKVEDADEVMRHMIEKGVEPDIITYSAIMDGYCLRGQVDRARRVFNVLRDKGI 339
Query: 443 PPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEP 479
P+ + +IL++ +A +L G + +P
Sbjct: 340 KPNIFSYSILINGYCKKKNLAKAMQLFGEISQKGLKP 376
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/257 (22%), Positives = 115/257 (44%), Gaps = 10/257 (3%)
Query: 253 KEVS------KIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTH 306
KEVS ++ +M R P V+ ++ L + +++F EM G+ +
Sbjct: 38 KEVSCLDDAVSLFHRMVRMKPLPSVIDFSKLFKTMINMKHYSAVVSLFREMRILGIPISD 97
Query: 307 KAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRR 366
NI+ +++ + +D A +V + ++ ++ T+L + + A F++
Sbjct: 98 SILNIVTNSYCLRHRIDCAFSVLPIYLKTGIPFNVVTFNTLLGGLFAENKVTDAVVLFKK 157
Query: 367 LKQDGFV-PNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNK 425
L ++ PN + YGT++ G +K + EK + + M KP+ ++ ++DA K+
Sbjct: 158 LVREKICEPNEVMYGTVMNGLSKRGHTEKTLSLLRIMEQGNTKPDVRTYSIVIDALCKDI 217
Query: 426 DFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGINGLS 485
+ D+A+ EM+ PP+ N L+ + + LL + N P ++ S
Sbjct: 218 NLDAAINLLNEMKQKNIPPNIFTYNSLIDGLCKLGQWEKVKTLLSEMVNLNINPNVHTFS 277
Query: 486 ISVD---EEDDDDDDDE 499
I +D +E +D DE
Sbjct: 278 ILIDGLCKEGKVEDADE 294
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/279 (21%), Positives = 112/279 (40%), Gaps = 4/279 (1%)
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETN---YKEVSKIYDQMQRAGLQPDV 271
K+ + A LF M S + ++ L N Y V ++ +M+ G+
Sbjct: 38 KEVSCLDDAVSLFHRMVRMKPLPSVIDFSKLFKTMINMKHYSAVVSLFREMRILGIPISD 97
Query: 272 VSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKC 331
++ N+Y R + A +V L G+ +N LL V A +FK
Sbjct: 98 SILNIVTNSYCLRHRIDCAFSVLPIYLKTGIPFNVVTFNTLLGGLFAENKVTDAVVLFKK 157
Query: 332 MRRDR-CSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVN 390
+ R++ C P+ Y T+++ E R ++Q P+V TY +I K
Sbjct: 158 LVREKICEPNEVMYGTVMNGLSKRGHTEKTLSLLRIMEQGNTKPDVRTYSIVIDALCKDI 217
Query: 391 NLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKN 450
NL+ + + ++M+ I PN + +++D K ++ EM + P+ +
Sbjct: 218 NLDAAINLLNEMKQKNIPPNIFTYNSLIDGLCKLGQWEKVKTLLSEMVNLNINPNVHTFS 277
Query: 451 ILLSLAKTADERNEANELLGNFNHPNNEPGINGLSISVD 489
IL+ + +A+E++ + EP I S +D
Sbjct: 278 ILIDGLCKEGKVEDADEVMRHMIEKGVEPDIITYSAIMD 316
>gi|168049914|ref|XP_001777406.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162671255|gb|EDQ57810.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 570
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 94/391 (24%), Positives = 181/391 (46%), Gaps = 36/391 (9%)
Query: 70 LKQLKKWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAP 129
L LK W V + +WL+ + ++ N + +++ + + ++++ M G P
Sbjct: 17 LNTLKSWKVALSLFKWLQAEQNFNLNIYTYNVMLKVLRRGQQWELSQQIAEDMINAGIRP 76
Query: 130 SVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVF 189
++++ L+ R A A F RM + P A+TY ++ ++ + K+ EA ++
Sbjct: 77 DNITYSTLISCANRCNYQDAAMAWFDRMHDAQCVPDAVTYSTMIDVYGKVGKYDEAVALY 136
Query: 190 MTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFE 249
++ +KS KPD+ + M+ ++ +AG A +F
Sbjct: 137 ESV---KKSGWKPDKVTYGTMVRLFGRAGYISAAVSIF---------------------- 171
Query: 250 TNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAY 309
D+M+ +G+QP V Y ++I+ G+A R AL VF+EM AGV+P
Sbjct: 172 ----------DEMKGSGIQPGSVVYNIMISCLGRAGRMGHALKVFQEMKQAGVKPNAVTL 221
Query: 310 NILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQ 369
+ +++ ++ SG V + +F MR+D + DI Y ++ A + AE++ R + +
Sbjct: 222 STVMEIYSRSGKVMEGLGIFHHMRQDL-ACDIIVYNAVIKMCREAGLVPEAEQYLREMVE 280
Query: 370 DGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDS 429
G PN TY +I YAK + ++ ++ G +P+ +T+++ YG KD++
Sbjct: 281 YGHQPNDWTYRNMISLYAKNGMAVEAQRMFSQLVEAGYQPDVMSYTSLLQGYGNAKDYEK 340
Query: 430 AVVWYKEMESCGFPPDQKAKNILLSLAKTAD 460
EM S PD++ ++L+L D
Sbjct: 341 VQEILHEMVSANCAPDERLWCVILNLLDACD 371
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 92/374 (24%), Positives = 166/374 (44%), Gaps = 44/374 (11%)
Query: 130 SVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVF 189
++ ++ +++ RG +++ ++ I M ++G RP +TY ++ N A F
Sbjct: 42 NIYTYNVMLKVLRRGQQWELSQQIAEDMINAGIRPDNITYSTLISCANRCNYQDAAMAWF 101
Query: 190 MTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFE 249
+ D + PD + MI +Y K G Y++A L+ + + G + VTY +++
Sbjct: 102 DRMHDAQ---CVPDAVTYSTMIDVYGKVGKYDEAVALYESVKKSGWKPDKVTYGTMVRLF 158
Query: 250 TNYKEVS---KIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTH 306
+S I+D+M+ +G+QP V Y ++I+ G+A R AL VF+EM AGV+P
Sbjct: 159 GRAGYISAAVSIFDEMKGSGIQPGSVVYNIMISCLGRAGRMGHALKVFQEMKQAGVKPNA 218
Query: 307 KAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRR 366
+ +++ ++ SG V + +F MR+D + DI Y ++ A + AE++ R
Sbjct: 219 VTLSTVMEIYSRSGKVMEGLGIFHHMRQDL-ACDIIVYNAVIKMCREAGLVPEAEQYLRE 277
Query: 367 LKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPN-QTIFTTIMDAYGKNK 425
+ + G PN TY +I YAK NG+ Q +F+ +++A
Sbjct: 278 MVEYGHQPNDWTYRNMISLYAK----------------NGMAVEAQRMFSQLVEA----- 316
Query: 426 DFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGINGLS 485
G+ PD + LL A + + E+L N P
Sbjct: 317 ---------------GYQPDVMSYTSLLQGYGNAKDYEKVQEILHEMVSANCAPDERLWC 361
Query: 486 ISVDEEDDDDDDDE 499
+ ++ D D D E
Sbjct: 362 VILNLLDACDTDVE 375
Score = 105 bits (262), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 61/256 (23%), Positives = 124/256 (48%), Gaps = 9/256 (3%)
Query: 89 QSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYK 148
+S W +++ + ++ +G+ G + A + M G P V + ++ GR GR
Sbjct: 141 KSGWKPDKVTYGTMVRLFGRAGYISAAVSIFDEMKGSGIQPGSVVYNIMISCLGRAGRMG 200
Query: 149 NAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFH 208
+A +F+ M+ +G +P+A+T +++++ + K E +F + + L D +++
Sbjct: 201 HALKVFQEMKQAGVKPNAVTLSTVMEIYSRSGKVMEGLGIFHHM----RQDLACDIIVYN 256
Query: 209 MMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETN---YKEVSKIYDQMQRA 265
+I M ++AG +A + M E G Q + TY +++S E +++ Q+ A
Sbjct: 257 AVIKMCREAGLVPEAEQYLREMVEYGHQPNDWTYRNMISLYAKNGMAVEAQRMFSQLVEA 316
Query: 266 GLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQA 325
G QPDV+SY L+ YG A+ E+ + EM+ A P + + ++L+ +
Sbjct: 317 GYQPDVMSYTSLLQGYGNAKDYEKVQEILHEMVSANCAPDERLWCVILNLLDACDTDVEF 376
Query: 326 RTVFKCMRRDRCSPDI 341
+ C+R C+P +
Sbjct: 377 EILRSCLR--MCNPTM 390
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 72/157 (45%), Gaps = 1/157 (0%)
Query: 325 ARTVFKCMRRDR-CSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLI 383
A ++FK ++ ++ + +I +Y ML E +++ + G P+ ITY TLI
Sbjct: 26 ALSLFKWLQAEQNFNLNIYTYNVMLKVLRRGQQWELSQQIAEDMINAGIRPDNITYSTLI 85
Query: 384 KGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFP 443
+ N + M +D+M P+ ++T++D YGK +D AV Y+ ++ G+
Sbjct: 86 SCANRCNYQDAAMAWFDRMHDAQCVPDAVTYSTMIDVYGKVGKYDEAVALYESVKKSGWK 145
Query: 444 PDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPG 480
PD+ ++ L A + A + +PG
Sbjct: 146 PDKVTYGTMVRLFGRAGYISAAVSIFDEMKGSGIQPG 182
>gi|125557843|gb|EAZ03379.1| hypothetical protein OsI_25524 [Oryza sativa Indica Group]
Length = 716
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 99/429 (23%), Positives = 204/429 (47%), Gaps = 16/429 (3%)
Query: 44 AVAVLRSERTRGQPLPKDLVLGTLVRLKQLKKWNVVSEVLEWLRI--QSWWDFNEMDFLM 101
AVAV+R + R +++G L ++ ++ LE LR + ++ F
Sbjct: 32 AVAVMRRLKFRPAFSAYTVLIGALAEARRPER------ALELLRQMQEVGYEVGVHLFTT 85
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
L+ A ++G A ++ + P +V + ++ +G+ G A F +++ G
Sbjct: 86 LVRALAREGQVADALALVDEVKGSCLEPDIVLYNVCIDCFGKAGNVDMACKFFHELKAQG 145
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
+P ++Y ++ + +A + EAEE+F + E P ++ MI Y AG +E
Sbjct: 146 LKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPC---AYAYNTMIMGYGSAGRFE 202
Query: 222 KARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSK---IYDQMQRAGLQPDVVSYALLI 278
A KL + ERG S V++NS+++ ++V + +++ M++ +P+ +Y ++I
Sbjct: 203 DAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLFEVMKKDA-EPNSSTYNIII 261
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCS 338
+ R EEA + +EM A + P NI++D + +++A +F+ + C+
Sbjct: 262 DMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFESASQRGCN 321
Query: 339 PDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEI 398
PD +Y +++ ++ A + F ++ G N + Y +LI+ + E ++
Sbjct: 322 PDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGRKEDGHKV 381
Query: 399 YDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILL-SLAK 457
+ ++ G KP+ T+ T MD K + + + ++++ S GF PD ++ +IL+ L K
Sbjct: 382 FKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSILIHGLTK 441
Query: 458 TADERNEAN 466
R +N
Sbjct: 442 AGQARETSN 450
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 79/328 (24%), Positives = 162/328 (49%), Gaps = 6/328 (1%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + + LI + G KV + ++G P + M+ + G + IF
Sbjct: 358 NPVVYTSLIRNFFIHGRKEDGHKVFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIF 417
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
++S G P +Y I++ +A + +E +F + ++ D + ++ ++ +
Sbjct: 418 EDIRSYGFLPDVRSYSILIHGLTKAGQARETSNIFHAM---KQQGFALDARAYNAVVDGF 474
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSL---MSFETNYKEVSKIYDQMQRAGLQPDV 271
K+G KA ++ M E+ VQ + TY ++ ++ E ++++ + G++ +V
Sbjct: 475 CKSGKVHKAYEILEEMKEKCVQPTVATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNV 534
Query: 272 VSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKC 331
V Y+ LI+ +GK R +EA + EEM+ G+ P +N LLDA + +++A F+
Sbjct: 535 VLYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLLDALVKAEEINEALVCFQS 594
Query: 332 MRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNN 391
M+ +C P+ +Y+ +++ A F++ +++ G VPNV+TY T+I G AKV N
Sbjct: 595 MKEMKCPPNTYTYSILINGLCRVQKYNKAFVFWQDMQKQGLVPNVVTYTTMISGLAKVGN 654
Query: 392 LEKMMEIYDKMRVNGIKPNQTIFTTIMD 419
+ ++++ + NG P+ F +++
Sbjct: 655 ITDAYSLFERFKANGGIPDAASFNALIE 682
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 97/412 (23%), Positives = 185/412 (44%), Gaps = 8/412 (1%)
Query: 58 LPKDLVLGTLV-RLKQLKKWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAE 116
P L + +V RL + +K ++ E Q + + + + LI GK+G ++A
Sbjct: 286 FPNLLTVNIMVDRLCKARKLEEAYKIFESAS-QRGCNPDCVTYCSLIDGLGKKGQVDEAY 344
Query: 117 KVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLF 176
++ M G+ + V +T+L+ + GR ++ +F+ + G +P +
Sbjct: 345 RLFEKMLDAGHNANPVVYTSLIRNFFIHGRKEDGHKVFKELIRRGCKPDLTLLNTYMDCV 404
Query: 177 VEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQ 236
+A E E+ M D PD + + ++I+ KAG + +F M ++G
Sbjct: 405 FKAG---EVEKGRMIFEDIRSYGFLPDVRSYSILIHGLTKAGQARETSNIFHAMKQQGFA 461
Query: 237 QSTVTYNSLMSFETNYKEVSKIYD---QMQRAGLQPDVVSYALLINAYGKARREEEALAV 293
YN+++ +V K Y+ +M+ +QP V +Y +++ K R +EA +
Sbjct: 462 LDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTVATYGAIVDGLAKIDRLDEAYML 521
Query: 294 FEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVN 353
FEE G+ Y+ L+D F G +D+A + + M + +P++ ++ ++L A V
Sbjct: 522 FEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLLDALVK 581
Query: 354 ASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTI 413
A ++ A F+ +K+ PN TY LI G +V K + M+ G+ PN
Sbjct: 582 AEEINEALVCFQSMKEMKCPPNTYTYSILINGLCRVQKYNKAFVFWQDMQKQGLVPNVVT 641
Query: 414 FTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEA 465
+TT++ K + A ++ ++ G PD + N L+ A+ EA
Sbjct: 642 YTTMISGLAKVGNITDAYSLFERFKANGGIPDAASFNALIEGMSNANRAMEA 693
Score = 131 bits (330), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 104/436 (23%), Positives = 182/436 (41%), Gaps = 75/436 (17%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGR------------------ 143
+I YG G F A K+L + ++G PSVVS +++ G+
Sbjct: 191 MIMGYGSAGRFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLFEVMKKDA 250
Query: 144 ----------------GGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEE 187
GGR + A I M+ + P+ LT I++ +A K +EA +
Sbjct: 251 EPNSSTYNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYK 310
Query: 188 VFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSL-- 245
+F + + PD + +I K G ++A +LF M + G + V Y SL
Sbjct: 311 IFES---ASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIR 367
Query: 246 --------------------------MSFETNYK-------EVSK---IYDQMQRAGLQP 269
++ Y EV K I++ ++ G P
Sbjct: 368 NFFIHGRKEDGHKVFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLP 427
Query: 270 DVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVF 329
DV SY++LI+ KA + E +F M G +AYN ++D F SG V +A +
Sbjct: 428 DVRSYSILIHGLTKAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEIL 487
Query: 330 KCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKV 389
+ M+ P + +Y ++ ++ A F K G NV+ Y +LI G+ KV
Sbjct: 488 EEMKEKCVQPTVATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKV 547
Query: 390 NNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAK 449
+++ I ++M G+ PN + +++DA K ++ + A+V ++ M+ PP+
Sbjct: 548 GRIDEAYLILEEMMKKGLTPNVYTWNSLLDALVKAEEINEALVCFQSMKEMKCPPNTYTY 607
Query: 450 NILLSLAKTADERNEA 465
+IL++ + N+A
Sbjct: 608 SILINGLCRVQKYNKA 623
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 107/229 (46%), Gaps = 1/229 (0%)
Query: 261 QMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISG 320
QMQ G + V + L+ A + + +ALA+ +E+ + + P YN+ +D F +G
Sbjct: 70 QMQEVGYEVGVHLFTTLVRALAREGQVADALALVDEVKGSCLEPDIVLYNVCIDCFGKAG 129
Query: 321 MVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYG 380
VD A F ++ PD SYT+M+ A + AE+ F +++ + VP Y
Sbjct: 130 NVDMACKFFHELKAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYN 189
Query: 381 TLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESC 440
T+I GY E ++ +++R G P+ F +I+ GK + D A+ ++ M+
Sbjct: 190 TMIMGYGSAGRFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLFEVMKK- 248
Query: 441 GFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGINGLSISVD 489
P+ NI++ + EA +L H + P + ++I VD
Sbjct: 249 DAEPNSSTYNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVD 297
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/283 (22%), Positives = 133/283 (46%), Gaps = 4/283 (1%)
Query: 200 LKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSL---MSFETNYKEVS 256
+P + ++I +A E+A +L M E G + + +L ++ E +
Sbjct: 41 FRPAFSAYTVLIGALAEARRPERALELLRQMQEVGYEVGVHLFTTLVRALAREGQVADAL 100
Query: 257 KIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAF 316
+ D+++ + L+PD+V Y + I+ +GKA + A F E+ G++P +Y ++
Sbjct: 101 ALVDEVKGSCLEPDIVLYNVCIDCFGKAGNVDMACKFFHELKAQGLKPDDVSYTSMIWVL 160
Query: 317 AISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNV 376
+G + +A +F M +R P +Y TM+ Y +A E A K RL++ G +P+V
Sbjct: 161 CKAGRLGEAEELFAQMEAERSVPCAYAYNTMIMGYGSAGRFEDAYKLLERLRERGCIPSV 220
Query: 377 ITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKE 436
+++ +++ K +++ + +++ M+ + +PN + + I+D + A E
Sbjct: 221 VSFNSILTCLGKKRKVDEALSLFEVMKKDA-EPNSSTYNIIIDMLCLGGRVEEAYRILDE 279
Query: 437 MESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEP 479
ME P+ NI++ A + EA ++ + + P
Sbjct: 280 MEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFESASQRGCNP 322
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 35/158 (22%), Positives = 75/158 (47%)
Query: 322 VDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGT 381
+D A MRR + P +YT ++ A A E A + R++++ G+ V + T
Sbjct: 26 LDDAVLAVAVMRRLKFRPAFSAYTVLIGALAEARRPERALELLRQMQEVGYEVGVHLFTT 85
Query: 382 LIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCG 441
L++ A+ + + + D+++ + ++P+ ++ +D +GK + D A ++ E+++ G
Sbjct: 86 LVRALAREGQVADALALVDEVKGSCLEPDIVLYNVCIDCFGKAGNVDMACKFFHELKAQG 145
Query: 442 FPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEP 479
PD + ++ + A EA EL + P
Sbjct: 146 LKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVP 183
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 72/167 (43%), Gaps = 3/167 (1%)
Query: 93 DFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEA 152
+ N + + LI +GK G ++A +L M KKG P+V + +L++A + A
Sbjct: 531 ELNVVLYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLLDALVKAEEINEALV 590
Query: 153 IFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIY 212
F+ M+ P+ TY I++ K+ +A F+ D +K L P+ + MI
Sbjct: 591 CFQSMKEMKCPPNTYTYSILINGLCRVQKYNKA---FVFWQDMQKQGLVPNVVTYTTMIS 647
Query: 213 MYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSKIY 259
K G A LF G ++N+L+ +N + Y
Sbjct: 648 GLAKVGNITDAYSLFERFKANGGIPDAASFNALIEGMSNANRAMEAY 694
>gi|255547043|ref|XP_002514579.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223546183|gb|EEF47685.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 840
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 90/345 (26%), Positives = 168/345 (48%), Gaps = 6/345 (1%)
Query: 101 MLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSS 160
+L+ + K + A K+ M G P +++++ L+ + G + A ++ +M S+
Sbjct: 426 VLLGSLCKSRQVDVAFKLFCEMEANGLRPDLITYSTLIHGLCKQGEVQQAILLYEKMCSN 485
Query: 161 GPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGY 220
P++L + IL E K +A F L+ S L D ++++MI Y K G
Sbjct: 486 RIIPNSLIHGAILMGLCEKGKISQARMYFDYLI---TSNLSLDIILYNIMIDGYIKRGNT 542
Query: 221 EKARKLFALMAERGVQQSTVTYNSLM-SFETNYK--EVSKIYDQMQRAGLQPDVVSYALL 277
+A KL+ + E+G+ + VT+NSLM F N K + ++ D ++ GL+P+ V+Y L
Sbjct: 543 REAVKLYKQLGEKGISPTIVTFNSLMYGFCINRKLSQARRLLDTIKLHGLEPNAVTYTTL 602
Query: 278 INAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRC 337
+N Y + + L + EM + PTH Y +++ + ++ + + M
Sbjct: 603 MNVYCEEGNMQSLLELLSEMKAKAIGPTHITYTVVIKGLCKQWKLQESCQLLEDMDAVGL 662
Query: 338 SPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMME 397
+PD SY T++ A+ A DM A + + ++ P +TY LI G+ +L+
Sbjct: 663 TPDQVSYNTIIQAFCKARDMRKAFQLYDKMLLHNLEPTSVTYNILINGFCVYGDLKDADN 722
Query: 398 IYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGF 442
+ ++ + N+ +TTI+ A+ D D AVV++++M GF
Sbjct: 723 LLVSLQNRKVNLNKYAYTTIIKAHCAKGDVDKAVVYFRQMVEKGF 767
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 104/444 (23%), Positives = 189/444 (42%), Gaps = 48/444 (10%)
Query: 97 MDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRR 156
+ F +++ Y K G + A+ M K G P S+ L+ G A +
Sbjct: 282 VSFNTIMSRYCKLGFVDVAKSFFCMMLKHGLLPDAYSYNILIHGLCIAGSMGEALDLKND 341
Query: 157 MQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKK 216
M++ G P +TY I+ K F A + +L K P P+ + ++I + +
Sbjct: 342 MENHGLEPDMVTYNILAKGFRLLGLINGAWNIIQKMLI--KGP-NPNLVTYTVLICGHCQ 398
Query: 217 AGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVS---KIYDQMQRAGLQPDVVS 273
G E+A KL+ M G Q S ++ L+ ++V K++ +M+ GL+PD+++
Sbjct: 399 IGNVEEALKLYKEMISHGFQLSIISSTVLLGSLCKSRQVDVAFKLFCEMEANGLRPDLIT 458
Query: 274 YALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMR 333
Y+ LI+ K ++A+ ++E+M + P + +L G + QAR F +
Sbjct: 459 YSTLIHGLCKQGEVQQAILLYEKMCSNRIIPNSLIHGAILMGLCEKGKISQARMYFDYLI 518
Query: 334 RDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLE 393
S DI Y M+ Y+ + A K +++L + G P ++T+ +L+ G+ L
Sbjct: 519 TSNLSLDIILYNIMIDGYIKRGNTREAVKLYKQLGEKGISPTIVTFNSLMYGFCINRKLS 578
Query: 394 KMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEM---------------- 437
+ + D ++++G++PN +TT+M+ Y + + S + EM
Sbjct: 579 QARRLLDTIKLHGLEPNAVTYTTLMNVYCEEGNMQSLLELLSEMKAKAIGPTHITYTVVI 638
Query: 438 ----------ESC---------GFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNE 478
ESC G PDQ + N ++ A + +A +L N E
Sbjct: 639 KGLCKQWKLQESCQLLEDMDAVGLTPDQVSYNTIIQAFCKARDMRKAFQLYDKMLLHNLE 698
Query: 479 PG-------INGLSISVDEEDDDD 495
P ING + D +D D+
Sbjct: 699 PTSVTYNILINGFCVYGDLKDADN 722
Score = 132 bits (333), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 84/363 (23%), Positives = 175/363 (48%), Gaps = 6/363 (1%)
Query: 110 GDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTY 169
G N A ++ M KG P++V++T L+ + + G + A +++ M S G + S ++
Sbjct: 365 GLINGAWNIIQKMLIKGPNPNLVTYTVLICGHCQIGNVEEALKLYKEMISHGFQLSIISS 424
Query: 170 QIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFAL 229
++L K ++ + F + E + L+PD + +I+ K G ++A L+
Sbjct: 425 TVLLG---SLCKSRQVDVAFKLFCEMEANGLRPDLITYSTLIHGLCKQGEVQQAILLYEK 481
Query: 230 MAERGVQQSTVTYNSLMSFETNYKEVSK---IYDQMQRAGLQPDVVSYALLINAYGKARR 286
M + +++ + +++ ++S+ +D + + L D++ Y ++I+ Y K
Sbjct: 482 MCSNRIIPNSLIHGAILMGLCEKGKISQARMYFDYLITSNLSLDIILYNIMIDGYIKRGN 541
Query: 287 EEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTT 346
EA+ +++++ + G+ PT +N L+ F I+ + QAR + ++ P+ +YTT
Sbjct: 542 TREAVKLYKQLGEKGISPTIVTFNSLMYGFCINRKLSQARRLLDTIKLHGLEPNAVTYTT 601
Query: 347 MLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNG 406
+++ Y +M+ + +K P ITY +IKG K L++ ++ + M G
Sbjct: 602 LMNVYCEEGNMQSLLELLSEMKAKAIGPTHITYTVVIKGLCKQWKLQESCQLLEDMDAVG 661
Query: 407 IKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEAN 466
+ P+Q + TI+ A+ K +D A Y +M P NIL++ + +A+
Sbjct: 662 LTPDQVSYNTIIQAFCKARDMRKAFQLYDKMLLHNLEPTSVTYNILINGFCVYGDLKDAD 721
Query: 467 ELL 469
LL
Sbjct: 722 NLL 724
Score = 115 bits (289), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 72/345 (20%), Positives = 166/345 (48%), Gaps = 8/345 (2%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
++ ++G ++A ++ + ++ + +++ Y + G + A +++++ G
Sbjct: 497 ILMGLCEKGKISQARMYFDYLITSNLSLDIILYNIMIDGYIKRGNTREAVKLYKQLGEKG 556
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEK-SPLKPDQKMFHMMIYMYKKAGGY 220
P+ +T+ ++ F K +A LLD K L+P+ + ++ +Y + G
Sbjct: 557 ISPTIVTFNSLMYGFCINRKLSQARR----LLDTIKLHGLEPNAVTYTTLMNVYCEEGNM 612
Query: 221 EKARKLFALMAERGVQQSTVTYNSL---MSFETNYKEVSKIYDQMQRAGLQPDVVSYALL 277
+ +L + M + + + +TY + + + +E ++ + M GL PD VSY +
Sbjct: 613 QSLLELLSEMKAKAIGPTHITYTVVIKGLCKQWKLQESCQLLEDMDAVGLTPDQVSYNTI 672
Query: 278 INAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRC 337
I A+ KAR +A ++++ML + PT YNIL++ F + G + A + ++ +
Sbjct: 673 IQAFCKARDMRKAFQLYDKMLLHNLEPTSVTYNILINGFCVYGDLKDADNLLVSLQNRKV 732
Query: 338 SPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMME 397
+ + +YTT++ A+ D++ A +FR++ + GF ++ Y +I K + +
Sbjct: 733 NLNKYAYTTIIKAHCAKGDVDKAVVYFRQMVEKGFEVSIRDYSAVIGRLCKRCLVTEAKY 792
Query: 398 IYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGF 442
+ M +G+ P+Q +F +++A+ + +S EM G+
Sbjct: 793 FFCMMLSDGVCPDQDLFEVLLNAFHQCGHLNSEFELLAEMIKSGW 837
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 87/366 (23%), Positives = 163/366 (44%), Gaps = 11/366 (3%)
Query: 92 WDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAE 151
WD + + + ML AY + + A VL M + S+ ++ +L+ R+ N
Sbjct: 175 WDSSNVVWDMLACAYSRSAMVHDALFVLVKMKDLNFIVSIQTYNSLLYNL----RHSNIM 230
Query: 152 A-IFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMM 210
++ ++ SG S T I++ ++F++A F D E +P F+ +
Sbjct: 231 WDVYNEIKVSGTPQSEYTSSIVVDGLCRQSRFQDAVLFFQ---DTEGKEFQPSVVSFNTI 287
Query: 211 IYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSL---MSFETNYKEVSKIYDQMQRAGL 267
+ Y K G + A+ F +M + G+ +YN L + + E + + M+ GL
Sbjct: 288 MSRYCKLGFVDVAKSFFCMMLKHGLLPDAYSYNILIHGLCIAGSMGEALDLKNDMENHGL 347
Query: 268 QPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQART 327
+PD+V+Y +L + A + ++ML G P Y +L+ G V++A
Sbjct: 348 EPDMVTYNILAKGFRLLGLINGAWNIIQKMLIKGPNPNLVTYTVLICGHCQIGNVEEALK 407
Query: 328 VFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYA 387
++K M I S T +L + + ++ A K F ++ +G P++ITY TLI G
Sbjct: 408 LYKEMISHGFQLSIISSTVLLGSLCKSRQVDVAFKLFCEMEANGLRPDLITYSTLIHGLC 467
Query: 388 KVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQK 447
K +++ + +Y+KM N I PN I I+ + A +++ + + D
Sbjct: 468 KQGEVQQAILLYEKMCSNRIIPNSLIHGAILMGLCEKGKISQARMYFDYLITSNLSLDII 527
Query: 448 AKNILL 453
NI++
Sbjct: 528 LYNIMI 533
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/251 (22%), Positives = 115/251 (45%), Gaps = 1/251 (0%)
Query: 209 MMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSKIYDQMQRAGLQ 268
M+ Y ++ A + M + S TYNSL+ + + +Y++++ +G
Sbjct: 184 MLACAYSRSAMVHDALFVLVKMKDLNFIVSIQTYNSLLYNLRHSNIMWDVYNEIKVSGTP 243
Query: 269 PDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTV 328
+ +++++ + R ++A+ F++ +P+ ++N ++ + G VD A++
Sbjct: 244 QSEYTSSIVVDGLCRQSRFQDAVLFFQDTEGKEFQPSVVSFNTIMSRYCKLGFVDVAKSF 303
Query: 329 FKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAK 388
F M + PD SY ++ A M A ++ G P+++TY L KG+
Sbjct: 304 FCMMLKHGLLPDAYSYNILIHGLCIAGSMGEALDLKNDMENHGLEPDMVTYNILAKGFRL 363
Query: 389 VNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKA 448
+ + I KM + G PN +T ++ + + + + A+ YKEM S GF +
Sbjct: 364 LGLINGAWNIIQKMLIKGPNPNLVTYTVLICGHCQIGNVEEALKLYKEMISHGFQLSIIS 423
Query: 449 KNILL-SLAKT 458
+LL SL K+
Sbjct: 424 STVLLGSLCKS 434
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 41/210 (19%), Positives = 94/210 (44%), Gaps = 6/210 (2%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
+ + ++I KQ ++ ++L M+ G P VS+ +++A+ + + A ++
Sbjct: 630 THITYTVVIKGLCKQWKLQESCQLLEDMDAVGLTPDQVSYNTIIQAFCKARDMRKAFQLY 689
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
+M P+++TY I++ F K+A+ + ++L + + ++ + +I +
Sbjct: 690 DKMLLHNLEPTSVTYNILINGFCVYGDLKDADNLLVSL---QNRKVNLNKYAYTTIIKAH 746
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSL---MSFETNYKEVSKIYDQMQRAGLQPDV 271
G +KA F M E+G + S Y+++ + E + M G+ PD
Sbjct: 747 CAKGDVDKAVVYFRQMVEKGFEVSIRDYSAVIGRLCKRCLVTEAKYFFCMMLSDGVCPDQ 806
Query: 272 VSYALLINAYGKARREEEALAVFEEMLDAG 301
+ +L+NA+ + + EM+ +G
Sbjct: 807 DLFEVLLNAFHQCGHLNSEFELLAEMIKSG 836
>gi|359473479|ref|XP_002267299.2| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At1g13630-like [Vitis
vinifera]
Length = 829
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 91/376 (24%), Positives = 175/376 (46%), Gaps = 6/376 (1%)
Query: 97 MDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRR 156
+ F L++ + K G + A+ M K G P V S+ L+ G + A
Sbjct: 271 VSFNALMSGFCKMGSVDVAKSFFCMMIKYGLLPDVYSYNILLHGLCVAGSMEEALEFTND 330
Query: 157 MQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKK 216
M++ G P +TY I+ F A +V +L + L PD + ++I + +
Sbjct: 331 MENHGVEPDIVTYNILANGFRILGLISGAWKVVQRML---LNGLNPDLVTYTILICGHCQ 387
Query: 217 AGGYEKARKLFALMAERGVQQSTVTYNSLMSFETN---YKEVSKIYDQMQRAGLQPDVVS 273
G E++ KL M +G++ S VTY L+S E + +M+ GL+PD+++
Sbjct: 388 MGNIEESFKLKEKMLSQGLKLSIVTYTVLLSSLCKSGRIDEAVILLHEMEVIGLKPDLLT 447
Query: 274 YALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMR 333
Y++LI+ K EEA+ ++EEM + P + ++ G + +A+ F +
Sbjct: 448 YSVLIHGLCKRGAVEEAIELYEEMCSKRIYPNSFVCSAIISGLFEKGAISEAQMYFDSVT 507
Query: 334 RDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLE 393
+ + +I Y M+ Y ++ A + ++++ + G P ++T+ +LI G+ K L
Sbjct: 508 KSDVAEEIILYNIMIDGYAKLGNIGEAVRSYKQIIEKGISPTIVTFNSLIYGFCKKGKLA 567
Query: 394 KMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILL 453
+ +++ D ++V+G+ P +TT+M+ Y + D S EME+ P Q +++
Sbjct: 568 EAVKLLDTIKVHGLVPTSVTYTTLMNGYCEEGDMHSMFDMLHEMEAKAIKPTQITYTVVV 627
Query: 454 SLAKTADERNEANELL 469
+E+ +LL
Sbjct: 628 KGLCKEGRLHESVQLL 643
Score = 128 bits (322), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 85/373 (22%), Positives = 174/373 (46%), Gaps = 8/373 (2%)
Query: 101 MLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSS 160
+L + G + A KV+ M G P +V++T L+ + + G + + + +M S
Sbjct: 345 ILANGFRILGLISGAWKVVQRMLLNGLNPDLVTYTILICGHCQMGNIEESFKLKEKMLSQ 404
Query: 161 GPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDE-EKSPLKPDQKMFHMMIYMYKKAGG 219
G + S +TY ++L ++ + EA + LL E E LKPD + ++I+ K G
Sbjct: 405 GLKLSIVTYTVLLSSLCKSGRIDEA----VILLHEMEVIGLKPDLLTYSVLIHGLCKRGA 460
Query: 220 YEKARKLFALMAERGVQQSTVTYNSLMS--FETN-YKEVSKIYDQMQRAGLQPDVVSYAL 276
E+A +L+ M + + ++ ++++S FE E +D + ++ + +++ Y +
Sbjct: 461 VEEAIELYEEMCSKRIYPNSFVCSAIISGLFEKGAISEAQMYFDSVTKSDVAEEIILYNI 520
Query: 277 LINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDR 336
+I+ Y K EA+ ++++++ G+ PT +N L+ F G + +A + ++
Sbjct: 521 MIDGYAKLGNIGEAVRSYKQIIEKGISPTIVTFNSLIYGFCKKGKLAEAVKLLDTIKVHG 580
Query: 337 CSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMM 396
P +YTT+++ Y DM ++ P ITY ++KG K L + +
Sbjct: 581 LVPTSVTYTTLMNGYCEEGDMHSMFDMLHEMEAKAIKPTQITYTVVVKGLCKEGRLHESV 640
Query: 397 EIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLA 456
++ M G+ P+Q + T++ ++ K D A + +M P N+L++
Sbjct: 641 QLLKYMYARGLFPDQITYNTVIQSFCKAHDLQKAFQLHNQMLQHSLQPSPVTYNVLINGL 700
Query: 457 KTADERNEANELL 469
+A+ LL
Sbjct: 701 CVYGNLKDADRLL 713
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 83/381 (21%), Positives = 169/381 (44%), Gaps = 35/381 (9%)
Query: 97 MDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRR 156
+ + +LI + + G+ ++ K+ M +G S+V++T L+ + + GR A +
Sbjct: 376 VTYTILICGHCQMGNIEESFKLKEKMLSQGLKLSIVTYTVLLSSLCKSGRIDEAVILLHE 435
Query: 157 MQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEE-------------------- 196
M+ G +P LTY +++ + +EA E++ + +
Sbjct: 436 MEVIGLKPDLLTYSVLIHGLCKRGAVEEAIELYEEMCSKRIYPNSFVCSAIISGLFEKGA 495
Query: 197 ------------KSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNS 244
KS + + ++++MI Y K G +A + + + E+G+ + VT+NS
Sbjct: 496 ISEAQMYFDSVTKSDVAEEIILYNIMIDGYAKLGNIGEAVRSYKQIIEKGISPTIVTFNS 555
Query: 245 LM---SFETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAG 301
L+ + E K+ D ++ GL P V+Y L+N Y + + EM
Sbjct: 556 LIYGFCKKGKLAEAVKLLDTIKVHGLVPTSVTYTTLMNGYCEEGDMHSMFDMLHEMEAKA 615
Query: 302 VRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAE 361
++PT Y +++ G + ++ + K M PD +Y T++ ++ A D++ A
Sbjct: 616 IKPTQITYTVVVKGLCKEGRLHESVQLLKYMYARGLFPDQITYNTVIQSFCKAHDLQKAF 675
Query: 362 KFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAY 421
+ ++ Q P+ +TY LI G NL+ + ++ I+ + +TTI+ A+
Sbjct: 676 QLHNQMLQHSLQPSPVTYNVLINGLCVYGNLKDADRLLVTLQDQSIRLTKVAYTTIIKAH 735
Query: 422 GKNKDFDSAVVWYKEMESCGF 442
D +A+V++ +M GF
Sbjct: 736 CAKGDVQNALVFFHQMVERGF 756
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 72/344 (20%), Positives = 152/344 (44%), Gaps = 35/344 (10%)
Query: 101 MLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSS 160
++I Y K G+ +A + + +KG +P++V+ +L+ + + G+ A + ++
Sbjct: 520 IMIDGYAKLGNIGEAVRSYKQIIEKGISPTIVTFNSLIYGFCKKGKLAEAVKLLDTIKVH 579
Query: 161 GPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGY 220
G P+++TY ++ + E + +F L + E +KP Q + +++ K G
Sbjct: 580 GLVPTSVTYTTLMNGYCEEG---DMHSMFDMLHEMEAKAIKPTQITYTVVVKGLCKEGRL 636
Query: 221 EKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSKIYDQMQRAGLQPDVVSYALLINA 280
++ +L M RG L PD ++Y +I +
Sbjct: 637 HESVQLLKYMYARG--------------------------------LFPDQITYNTVIQS 664
Query: 281 YGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPD 340
+ KA ++A + +ML ++P+ YN+L++ + G + A + ++
Sbjct: 665 FCKAHDLQKAFQLHNQMLQHSLQPSPVTYNVLINGLCVYGNLKDADRLLVTLQDQSIRLT 724
Query: 341 ICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYD 400
+YTT++ A+ D++ A FF ++ + GF ++ Y +I K N + +
Sbjct: 725 KVAYTTIIKAHCAKGDVQNALVFFHQMVERGFEVSIRDYSAVINRLCKRNLITDAKFFFC 784
Query: 401 KMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPP 444
M +GI P+Q I +++A+ ++ D +S + M CG P
Sbjct: 785 MMLTHGIPPDQDICLVMLNAFHRSGDPNSVFEIFAMMIKCGLLP 828
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 82/358 (22%), Positives = 150/358 (41%), Gaps = 50/358 (13%)
Query: 161 GPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKP---------------DQK 205
G R S +++ I+ + + KE V +++EE S P +
Sbjct: 110 GFRHSRVSWFIVSHVVARKGQSKELRRVLNQMVEEEGSGSAPSLCELLCNSFRDWDLNNV 169
Query: 206 MFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSKIYDQMQRA 265
++ M+ Y +A A + A M +Q S TYNSL+ + + +Y++++ +
Sbjct: 170 VWDMLACAYSRAEMVHDALFVLAKMKVLNLQVSIATYNSLLYNLRHTDIMWDVYNEIKAS 229
Query: 266 GLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQA 325
G+ + + +LI+ + R ++A+ E P+ ++N L+ F G VD A
Sbjct: 230 GVPQNEYTNPILIDGLCRQSRLQDAVTFLRETGGEEFGPSVVSFNALMSGFCKMGSVDVA 289
Query: 326 RTVFKCMRRDRCSPDICSYTTMLSAYVNASDME--------------------------- 358
++ F M + PD+ SY +L A ME
Sbjct: 290 KSFFCMMIKYGLLPDVYSYNILLHGLCVAGSMEEALEFTNDMENHGVEPDIVTYNILANG 349
Query: 359 --------GAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPN 410
GA K +R+ +G P+++TY LI G+ ++ N+E+ ++ +KM G+K +
Sbjct: 350 FRILGLISGAWKVVQRMLLNGLNPDLVTYTILICGHCQMGNIEESFKLKEKMLSQGLKLS 409
Query: 411 QTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANEL 468
+T ++ + K+ D AV+ EME G PD ++L+ EA EL
Sbjct: 410 IVTYTVLLSSLCKSGRIDEAVILLHEMEVIGLKPDLLTYSVLIHGLCKRGAVEEAIEL 467
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 84/397 (21%), Positives = 160/397 (40%), Gaps = 38/397 (9%)
Query: 92 WDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALM------------- 138
WD N + + ML AY + + A VL+ M S+ ++ +L+
Sbjct: 164 WDLNNVVWDMLACAYSRAEMVHDALFVLAKMKVLNLQVSIATYNSLLYNLRHTDIMWDVY 223
Query: 139 -------------------EAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEA 179
+ R R ++A R PS +++ ++ F +
Sbjct: 224 NEIKASGVPQNEYTNPILIDGLCRQSRLQDAVTFLRETGGEEFGPSVVSFNALMSGFCKM 283
Query: 180 NKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQST 239
A+ F ++ K L PD ++++++ AG E+A + M GV+
Sbjct: 284 GSVDVAKSFFCMMI---KYGLLPDVYSYNILLHGLCVAGSMEEALEFTNDMENHGVEPDI 340
Query: 240 VTYNSLMSFETNYKEVSKIYDQMQRA---GLQPDVVSYALLINAYGKARREEEALAVFEE 296
VTYN L + +S + +QR GL PD+V+Y +LI + + EE+ + E+
Sbjct: 341 VTYNILANGFRILGLISGAWKVVQRMLLNGLNPDLVTYTILICGHCQMGNIEESFKLKEK 400
Query: 297 MLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASD 356
ML G++ + Y +LL + SG +D+A + M PD+ +Y+ ++
Sbjct: 401 MLSQGLKLSIVTYTVLLSSLCKSGRIDEAVILLHEMEVIGLKPDLLTYSVLIHGLCKRGA 460
Query: 357 MEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTT 416
+E A + + + PN +I G + + + +D + + + ++
Sbjct: 461 VEEAIELYEEMCSKRIYPNSFVCSAIISGLFEKGAISEAQMYFDSVTKSDVAEEIILYNI 520
Query: 417 IMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILL 453
++D Y K + AV YK++ G P N L+
Sbjct: 521 MIDGYAKLGNIGEAVRSYKQIIEKGISPTIVTFNSLI 557
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/214 (17%), Positives = 99/214 (46%), Gaps = 6/214 (2%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
++ + +++ K+G +++ ++L +M +G P +++ +++++ + + A +
Sbjct: 619 TQITYTVVVKGLCKEGRLHESVQLLKYMYARGLFPDQITYNTVIQSFCKAHDLQKAFQLH 678
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
+M +PS +TY +++ K+A+ + +TL D+ ++ + + +I +
Sbjct: 679 NQMLQHSLQPSPVTYNVLINGLCVYGNLKDADRLLVTLQDQS---IRLTKVAYTTIIKAH 735
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSK---IYDQMQRAGLQPDV 271
G + A F M ERG + S Y+++++ ++ + M G+ PD
Sbjct: 736 CAKGDVQNALVFFHQMVERGFEVSIRDYSAVINRLCKRNLITDAKFFFCMMLTHGIPPDQ 795
Query: 272 VSYALLINAYGKARREEEALAVFEEMLDAGVRPT 305
+++NA+ ++ +F M+ G+ P
Sbjct: 796 DICLVMLNAFHRSGDPNSVFEIFAMMIKCGLLPV 829
Score = 39.7 bits (91), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 40/174 (22%), Positives = 66/174 (37%), Gaps = 3/174 (1%)
Query: 308 AYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRL 367
+++L A++ + MV A V M+ I +Y ++L N + + +
Sbjct: 170 VWDMLACAYSRAEMVHDALFVLAKMKVLNLQVSIATYNSLL---YNLRHTDIMWDVYNEI 226
Query: 368 KQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDF 427
K G N T LI G + + L+ + + P+ F +M + K
Sbjct: 227 KASGVPQNEYTNPILIDGLCRQSRLQDAVTFLRETGGEEFGPSVVSFNALMSGFCKMGSV 286
Query: 428 DSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGI 481
D A ++ M G PD + NILL A EA E + + EP I
Sbjct: 287 DVAKSFFCMMIKYGLLPDVYSYNILLHGLCVAGSMEEALEFTNDMENHGVEPDI 340
>gi|225453062|ref|XP_002266822.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
chloroplastic-like [Vitis vinifera]
Length = 582
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 106/427 (24%), Positives = 179/427 (41%), Gaps = 40/427 (9%)
Query: 92 WDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVV------------------- 132
+DF E + L+ K G FN++ L + KGY P V+
Sbjct: 64 YDFRETHLMKLLNRSCKAGKFNESLYFLECLVNKGYTPDVILCTKLIKGFFNFKNIEKAS 123
Query: 133 -------SHT--------ALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFV 177
SHT A++ + + R + A + RM++ G P +TY I++
Sbjct: 124 RVMEILESHTEPDVFAYNAVISGFCKVNRIEAATQVLNRMKARGFLPDIVTYNIMIGSLC 183
Query: 178 EANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQ 237
K A +V LL + P + ++I GG +A KL M RG+
Sbjct: 184 NRRKLGLALKVLDQLLLDN---CMPTVITYTILIEATIVEGGINEAMKLLEEMLARGLLP 240
Query: 238 STVTYNSL---MSFETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVF 294
TYN++ M E + +++ + G +PDV+SY +L+ A+ + +E +
Sbjct: 241 DMYTYNAIIRGMCKEGMVERAAELITSLTSKGCKPDVISYNILLRAFLNQGKWDEGEKLV 300
Query: 295 EEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNA 354
EM G P Y+IL+ + G +D+A +V K M +PD SY ++SA
Sbjct: 301 AEMFSRGCEPNKVTYSILISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKE 360
Query: 355 SDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIF 414
++ A + +G +P+++ Y T++ K N + +EI++K+R G PN + +
Sbjct: 361 GRLDLAIGIMDYMISNGCLPDIVNYNTILAALCKNGNANQALEIFNKLRGMGCPPNVSSY 420
Query: 415 TTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNH 474
T++ A D A+ M S G PD+ N L+S EA LL +
Sbjct: 421 NTMISALWSCGDRSRALGMVPAMISKGVDPDEITYNSLISCLCRDGLVEEAIGLLDDMEQ 480
Query: 475 PNNEPGI 481
P +
Sbjct: 481 SGFRPTV 487
Score = 138 bits (348), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 99/408 (24%), Positives = 193/408 (47%), Gaps = 19/408 (4%)
Query: 61 DLVLGT-----LVRLKQLKKWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKA 115
D++L T K ++K + V E+LE + +N +I+ + K A
Sbjct: 102 DVILCTKLIKGFFNFKNIEKASRVMEILESHTEPDVFAYNA-----VISGFCKVNRIEAA 156
Query: 116 EKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKL 175
+VL+ M +G+ P +V++ ++ + + A + ++ P+ +TY I+++
Sbjct: 157 TQVLNRMKARGFLPDIVTYNIMIGSLCNRRKLGLALKVLDQLLLDNCMPTVITYTILIEA 216
Query: 176 FVEANKFKEAEEVFMTLLDEEKS-PLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERG 234
+ EA M LL+E + L PD ++ +I K G E+A +L + +G
Sbjct: 217 TIVEGGINEA----MKLLEEMLARGLLPDMYTYNAIIRGMCKEGMVERAAELITSLTSKG 272
Query: 235 VQQSTVTYNSLMSFETN---YKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEAL 291
+ ++YN L+ N + E K+ +M G +P+ V+Y++LI++ + R +EA+
Sbjct: 273 CKPDVISYNILLRAFLNQGKWDEGEKLVAEMFSRGCEPNKVTYSILISSLCRFGRIDEAI 332
Query: 292 AVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAY 351
+V + M++ + P +Y+ L+ A G +D A + M + C PDI +Y T+L+A
Sbjct: 333 SVLKVMIEKELTPDTYSYDPLISALCKEGRLDLAIGIMDYMISNGCLPDIVNYNTILAAL 392
Query: 352 VNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQ 411
+ A + F +L+ G PNV +Y T+I + + + + M G+ P++
Sbjct: 393 CKNGNANQALEIFNKLRGMGCPPNVSSYNTMISALWSCGDRSRALGMVPAMISKGVDPDE 452
Query: 412 TIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNI-LLSLAKT 458
+ +++ ++ + A+ +ME GF P + NI LL L K
Sbjct: 453 ITYNSLISCLCRDGLVEEAIGLLDDMEQSGFRPTVISYNIVLLGLCKV 500
Score = 135 bits (339), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 98/371 (26%), Positives = 167/371 (45%), Gaps = 6/371 (1%)
Query: 101 MLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSS 160
++I + + A KVL + P+V+++T L+EA G A + M +
Sbjct: 177 IMIGSLCNRRKLGLALKVLDQLLLDNCMPTVITYTILIEATIVEGGINEAMKLLEEMLAR 236
Query: 161 GPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGY 220
G P TY I++ + + A E+ +L + KPD +++++ + G +
Sbjct: 237 GLLPDMYTYNAIIRGMCKEGMVERAAELITSLTSKG---CKPDVISYNILLRAFLNQGKW 293
Query: 221 EKARKLFALMAERGVQQSTVTYNSLMSFETNYK---EVSKIYDQMQRAGLQPDVVSYALL 277
++ KL A M RG + + VTY+ L+S + E + M L PD SY L
Sbjct: 294 DEGEKLVAEMFSRGCEPNKVTYSILISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPL 353
Query: 278 INAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRC 337
I+A K R + A+ + + M+ G P YN +L A +G +QA +F +R C
Sbjct: 354 ISALCKEGRLDLAIGIMDYMISNGCLPDIVNYNTILAALCKNGNANQALEIFNKLRGMGC 413
Query: 338 SPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMME 397
P++ SY TM+SA + D A + G P+ ITY +LI + +E+ +
Sbjct: 414 PPNVSSYNTMISALWSCGDRSRALGMVPAMISKGVDPDEITYNSLISCLCRDGLVEEAIG 473
Query: 398 IYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAK 457
+ D M +G +P + ++ K + D A+ + EM G P++ +L+
Sbjct: 474 LLDDMEQSGFRPTVISYNIVLLGLCKVRRIDDAIGMFAEMIEKGCRPNETTYILLIEGIG 533
Query: 458 TADERNEANEL 468
A R EA EL
Sbjct: 534 FAGWRTEAMEL 544
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/235 (24%), Positives = 91/235 (38%), Gaps = 41/235 (17%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N++ + +LI++ + G ++A VL M +K P S+ L+ A + GR A I
Sbjct: 311 NKVTYSILISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGRLDLAIGIM 370
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
M S+G P + Y IL + +A E+F L P+ ++ MI
Sbjct: 371 DYMISNGCLPDIVNYNTILAALCKNGNANQALEIFNKL---RGMGCPPNVSSYNTMISAL 427
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETN---YKEVSKIYDQMQRAGLQPDV 271
G +A + M +GV +TYNSL+S +E + D M+++G +P V
Sbjct: 428 WSCGDRSRALGMVPAMISKGVDPDEITYNSLISCLCRDGLVEEAIGLLDDMEQSGFRPTV 487
Query: 272 VS-----------------------------------YALLINAYGKARREEEAL 291
+S Y LLI G A EA+
Sbjct: 488 ISYNIVLLGLCKVRRIDDAIGMFAEMIEKGCRPNETTYILLIEGIGFAGWRTEAM 542
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 74/157 (47%), Gaps = 5/157 (3%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
+I+A GD ++A ++ M KG P +++ +L+ R G + A + M+ SG
Sbjct: 423 MISALWSCGDRSRALGMVPAMISKGVDPDEITYNSLISCLCRDGLVEEAIGLLDDMEQSG 482
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
RP+ ++Y I+L + + +A +F ++++ +P++ + ++I AG
Sbjct: 483 FRPTVISYNIVLLGLCKVRRIDDAIGMFAEMIEKG---CRPNETTYILLIEGIGFAGWRT 539
Query: 222 KARKLFALMAERGV--QQSTVTYNSLMSFETNYKEVS 256
+A +L + R V Q S N YKE+S
Sbjct: 540 EAMELANSLFSRDVISQDSFKRLNKTFPMLDVYKELS 576
Score = 40.8 bits (94), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 27/109 (24%), Positives = 52/109 (47%)
Query: 88 IQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRY 147
I D +E+ + LI+ + G +A +L M + G+ P+V+S+ ++ + R
Sbjct: 444 ISKGVDPDEITYNSLISCLCRDGLVEEAIGLLDDMEQSGFRPTVISYNIVLLGLCKVRRI 503
Query: 148 KNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEE 196
+A +F M G RP+ TY ++++ A EA E+ +L +
Sbjct: 504 DDAIGMFAEMIEKGCRPNETTYILLIEGIGFAGWRTEAMELANSLFSRD 552
>gi|12324362|gb|AAG52154.1|AC022355_15 unknown protein; 19199-17308 [Arabidopsis thaliana]
Length = 558
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 95/350 (27%), Positives = 167/350 (47%), Gaps = 6/350 (1%)
Query: 99 FLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQ 158
F +I + K + A + M KG P+VV++++L+ GR+ +A + M
Sbjct: 187 FNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMI 246
Query: 159 SSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAG 218
P+ +T+ ++ FV+ KF EAE++ ++ K + PD ++ +I +
Sbjct: 247 EKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMI---KRSIDPDIFTYNSLINGFCMHD 303
Query: 219 GYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEV---SKIYDQMQRAGLQPDVVSYA 275
+KA+++F M + TYN+L+ K V ++++ +M GL D V+Y
Sbjct: 304 RLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYT 363
Query: 276 LLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRD 335
LI + A VF++M+ GV P Y+ILLD +G +++A VF M++
Sbjct: 364 TLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKS 423
Query: 336 RCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKM 395
DI YTTM+ A ++ F L G PNV+TY T+I G L++
Sbjct: 424 EIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEA 483
Query: 396 MEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPD 445
+ KM+ +G P+ + T++ A+ ++ D ++ +EM SC F D
Sbjct: 484 YALLKKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGD 533
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 106/454 (23%), Positives = 202/454 (44%), Gaps = 37/454 (8%)
Query: 53 TRGQPLPKDLVLGTLVR-LKQLKKWN-VVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQG 110
+ +PLP L+ + ++KK++ V+S L ++ ++ + + L+ Y
Sbjct: 34 VKSRPLPSIFEFNKLLSAIAKMKKFDLVISLALLGKMMKLGYEPSIVTLSSLLNGYCHGK 93
Query: 111 DFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQ 170
+ A ++ M + GY P ++ T L+ + A A+ RM G +P+ +TY
Sbjct: 94 RISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYG 153
Query: 171 IILKLF---------------VEANKFKEAEEVFMTLLDE-----------------EKS 198
+++ +EA K + +F T++D E
Sbjct: 154 VVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETK 213
Query: 199 PLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLM-SF--ETNYKEV 255
++P+ + +I G + A +L + M E+ + + VT+N+L+ +F E + E
Sbjct: 214 GIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEA 273
Query: 256 SKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDA 315
K++D M + + PD+ +Y LIN + R ++A +FE M+ P YN L+
Sbjct: 274 EKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKG 333
Query: 316 FAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPN 375
F S V+ +F+ M D +YTT++ + D + A+K F+++ DG P+
Sbjct: 334 FCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPD 393
Query: 376 VITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYK 435
++TY L+ G LEK +E++D M+ + IK + I+TT+++ K D +
Sbjct: 394 IMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFC 453
Query: 436 EMESCGFPPDQKAKNILLSLAKTADERNEANELL 469
+ G P+ N ++S + EA LL
Sbjct: 454 SLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALL 487
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 85/369 (23%), Positives = 172/369 (46%), Gaps = 6/369 (1%)
Query: 88 IQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRY 147
+Q N + + +++ K+GD + A +L+ M VV ++++ +
Sbjct: 141 VQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHV 200
Query: 148 KNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMF 207
+A +F+ M++ G RP+ +TY ++ ++ +A ++ +++++ + P+ F
Sbjct: 201 DDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKK---INPNLVTF 257
Query: 208 HMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSK---IYDQMQR 264
+ +I + K G + +A KL M +R + TYNSL++ + + K +++ M
Sbjct: 258 NALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVS 317
Query: 265 AGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQ 324
PD+ +Y LI + K++R E+ +F EM G+ Y L+ G D
Sbjct: 318 KDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDN 377
Query: 325 ARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIK 384
A+ VFK M D PDI +Y+ +L N +E A + F +++ ++ Y T+I+
Sbjct: 378 AQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIE 437
Query: 385 GYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPP 444
G K ++ +++ + + G+KPN + T++ + A K+M+ G P
Sbjct: 438 GMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLP 497
Query: 445 DQKAKNILL 453
D N L+
Sbjct: 498 DSGTYNTLI 506
Score = 98.2 bits (243), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 86/388 (22%), Positives = 153/388 (39%), Gaps = 76/388 (19%)
Query: 140 AYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEE-KS 198
++G+ + +A +F M S P PS + +L + KF + + LL + K
Sbjct: 16 SWGKDLKLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLV--ISLALLGKMMKL 73
Query: 199 PLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMS---FETNYKEV 255
+P ++ Y A L M E G + T+T+ +L+ E
Sbjct: 74 GYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEA 133
Query: 256 SKIYDQMQRAGLQPDVVSYALLIN-----------------------------------A 280
+ D+M + G QP++V+Y +++N +
Sbjct: 134 VALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDS 193
Query: 281 YGKARREEEALAVFEEMLDAGVRPTHKAY------------------------------- 309
K R ++AL +F+EM G+RP Y
Sbjct: 194 LCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPN 253
Query: 310 ----NILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFR 365
N L+DAF G +A + M + PDI +Y ++++ + ++ A++ F
Sbjct: 254 LVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFE 313
Query: 366 RLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNK 425
+ P++ TY TLIKG+ K +E E++ +M G+ + +TT++ +
Sbjct: 314 FMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDG 373
Query: 426 DFDSAVVWYKEMESCGFPPDQKAKNILL 453
D D+A +K+M S G PPD +ILL
Sbjct: 374 DCDNAQKVFKQMVSDGVPPDIMTYSILL 401
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/272 (22%), Positives = 116/272 (42%), Gaps = 40/272 (14%)
Query: 223 ARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSKIYD-----QMQRAGLQPDVVSYALL 277
A LF M + S +N L+S K+ + +M + G +P +V+ + L
Sbjct: 26 AIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLALLGKMMKLGYEPSIVTLSSL 85
Query: 278 INAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRC 337
+N Y +R +A+A+ ++M++ G RP
Sbjct: 86 LNGYCHGKRISDAVALVDQMVEMGYRP--------------------------------- 112
Query: 338 SPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMME 397
D ++TT++ + A R+ Q G PN++TYG ++ G K +++
Sbjct: 113 --DTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFN 170
Query: 398 IYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAK 457
+ +KM I+ + IF TI+D+ K + D A+ +KEME+ G P+ + L+S
Sbjct: 171 LLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLC 230
Query: 458 TADERNEANELLGNFNHPNNEPGINGLSISVD 489
+ ++A++LL + P + + +D
Sbjct: 231 SYGRWSDASQLLSDMIEKKINPNLVTFNALID 262
>gi|125525011|gb|EAY73125.1| hypothetical protein OsI_00999 [Oryza sativa Indica Group]
Length = 634
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 80/332 (24%), Positives = 176/332 (53%), Gaps = 11/332 (3%)
Query: 99 FLMLITAYGKQGDFNKAEKVLSFMNKKGYA------PSVVSHTALMEAYGRGGRYKNAEA 152
F LI YG G ++++V M G P++ ++ L++A+ GR + A
Sbjct: 187 FNTLIKGYGIAGRPEESQRVFDMMASGGAGGEAAVRPNLTTYNILVKAWCDAGRLEEAWR 246
Query: 153 IFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIY 212
+ RM++SG P +TY + + + ++ AEE+ + + +++ L+ ++ + +++
Sbjct: 247 VVARMRASGADPDVVTYNTLASAYAKNDETWRAEELVVEM--AQQAGLRTSERTWGIIVG 304
Query: 213 MYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSKIYDQ---MQRAGLQP 269
Y + G +A + M + GV + + +N+L+ + +++ + D M++ G++P
Sbjct: 305 GYCREGRLGEALRCVRQMKDSGVLPNVIVFNTLLKGFLDANDMAAVDDVLGLMEQFGIKP 364
Query: 270 DVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVF 329
D+V+Y+ +NA + + VF++M++AG+ P + Y+IL + + ++A +
Sbjct: 365 DIVTYSHQLNALSSMGHMAKCMKVFDKMIEAGIEPDPQVYSILAKGYVRAQQPEKAEELL 424
Query: 330 KCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKV 389
+ M R P++ ++TT++S + + +DM A + + ++ G PN+ T+ TLI GY+++
Sbjct: 425 RQMGRLGVRPNVVTFTTVISGWCSVADMGNAVRVYAAMRDAGVRPNLRTFETLIWGYSEL 484
Query: 390 NNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAY 421
K E+ M+ G++P QT + + DA+
Sbjct: 485 KQPWKAEEVLQMMQDAGVRPKQTTYCLVADAW 516
Score = 141 bits (356), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 95/364 (26%), Positives = 166/364 (45%), Gaps = 7/364 (1%)
Query: 97 MDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRR 156
+ + L+ A Q F+ +L+ + G P + AL+ A R A F R
Sbjct: 115 VTYTTLLAALTSQRAFDTIPWLLAEVEDAGLRPDSIFFNALINALVEARRMGEATNTFLR 174
Query: 157 MQSSGPRPSALTYQIILKLFVEANKFKEAEEVF---MTLLDEEKSPLKPDQKMFHMMIYM 213
M SG RP+A T+ ++K + A + +E++ VF + ++ ++P+ +++++
Sbjct: 175 MGHSGCRPTASTFNTLIKGYGIAGRPEESQRVFDMMASGGAGGEAAVRPNLTTYNILVKA 234
Query: 214 YKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSK----IYDQMQRAGLQP 269
+ AG E+A ++ A M G VTYN+L S E + + + Q+AGL+
Sbjct: 235 WCDAGRLEEAWRVVARMRASGADPDVVTYNTLASAYAKNDETWRAEELVVEMAQQAGLRT 294
Query: 270 DVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVF 329
++ +++ Y + R EAL +M D+GV P +N LL F + + V
Sbjct: 295 SERTWGIIVGGYCREGRLGEALRCVRQMKDSGVLPNVIVFNTLLKGFLDANDMAAVDDVL 354
Query: 330 KCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKV 389
M + PDI +Y+ L+A + M K F ++ + G P+ Y L KGY +
Sbjct: 355 GLMEQFGIKPDIVTYSHQLNALSSMGHMAKCMKVFDKMIEAGIEPDPQVYSILAKGYVRA 414
Query: 390 NNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAK 449
EK E+ +M G++PN FTT++ + D +AV Y M G P+ +
Sbjct: 415 QQPEKAEELLRQMGRLGVRPNVVTFTTVISGWCSVADMGNAVRVYAAMRDAGVRPNLRTF 474
Query: 450 NILL 453
L+
Sbjct: 475 ETLI 478
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 81/345 (23%), Positives = 168/345 (48%), Gaps = 17/345 (4%)
Query: 113 NKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQII 172
++A + G+ PS+V++T L+ A + + ++ +G RP ++ + +
Sbjct: 96 HQAHSAFRHLVDDGHRPSLVTYTTLLAALTSQRAFDTIPWLLAEVEDAGLRPDSIFFNAL 155
Query: 173 LKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALM-- 230
+ VEA + EA F+ + S +P F+ +I Y AG E+++++F +M
Sbjct: 156 INALVEARRMGEATNTFLRM---GHSGCRPTASTFNTLIKGYGIAGRPEESQRVFDMMAS 212
Query: 231 ----AERGVQQSTVTYNSLMSFETN---YKEVSKIYDQMQRAGLQPDVVSYALLINAYGK 283
E V+ + TYN L+ + +E ++ +M+ +G PDVV+Y L +AY K
Sbjct: 213 GGAGGEAAVRPNLTTYNILVKAWCDAGRLEEAWRVVARMRASGADPDVVTYNTLASAYAK 272
Query: 284 ---ARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPD 340
R EE V E AG+R + + + I++ + G + +A + M+ P+
Sbjct: 273 NDETWRAEE--LVVEMAQQAGLRTSERTWGIIVGGYCREGRLGEALRCVRQMKDSGVLPN 330
Query: 341 ICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYD 400
+ + T+L +++A+DM + ++Q G P+++TY + + + ++ K M+++D
Sbjct: 331 VIVFNTLLKGFLDANDMAAVDDVLGLMEQFGIKPDIVTYSHQLNALSSMGHMAKCMKVFD 390
Query: 401 KMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPD 445
KM GI+P+ +++ + Y + + + A ++M G P+
Sbjct: 391 KMIEAGIEPDPQVYSILAKGYVRAQQPEKAEELLRQMGRLGVRPN 435
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/234 (23%), Positives = 117/234 (50%), Gaps = 6/234 (2%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
+E + +++ Y ++G +A + + M G P+V+ L++ + + +
Sbjct: 295 SERTWGIIVGGYCREGRLGEALRCVRQMKDSGVLPNVIVFNTLLKGFLDANDMAAVDDVL 354
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
M+ G +P +TY L + +VF +++ + ++PD +++ ++ Y
Sbjct: 355 GLMEQFGIKPDIVTYSHQLNALSSMGHMAKCMKVFDKMIE---AGIEPDPQVYSILAKGY 411
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVS---KIYDQMQRAGLQPDV 271
+A EKA +L M GV+ + VT+ +++S + ++ ++Y M+ AG++P++
Sbjct: 412 VRAQQPEKAEELLRQMGRLGVRPNVVTFTTVISGWCSVADMGNAVRVYAAMRDAGVRPNL 471
Query: 272 VSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQA 325
++ LI Y + ++ +A V + M DAGVRP Y ++ DA+ G+V+ A
Sbjct: 472 RTFETLIWGYSELKQPWKAEEVLQMMQDAGVRPKQTTYCLVADAWKAVGLVENA 525
Score = 43.5 bits (101), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 27/123 (21%), Positives = 51/123 (41%), Gaps = 1/123 (0%)
Query: 331 CMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVN 390
C + C I + T + A ++A A FR L DG P+++TY TL+
Sbjct: 70 CGKGHTCQAVI-ARTRQMRAMIDARRPHQAHSAFRHLVDDGHRPSLVTYTTLLAALTSQR 128
Query: 391 NLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKN 450
+ + + ++ G++P+ F +++A + + A + M G P N
Sbjct: 129 AFDTIPWLLAEVEDAGLRPDSIFFNALINALVEARRMGEATNTFLRMGHSGCRPTASTFN 188
Query: 451 ILL 453
L+
Sbjct: 189 TLI 191
>gi|302792250|ref|XP_002977891.1| hypothetical protein SELMODRAFT_107819 [Selaginella moellendorffii]
gi|300154594|gb|EFJ21229.1| hypothetical protein SELMODRAFT_107819 [Selaginella moellendorffii]
Length = 385
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 91/314 (28%), Positives = 151/314 (48%), Gaps = 9/314 (2%)
Query: 128 APSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEE 187
P+ V++ +L+ + R A + M SG P TY ++ F ++ K +A
Sbjct: 51 VPTAVTYNSLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALR 110
Query: 188 VFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERG-VQQSTVTYNSLM 246
VF L+ +PD + +I K G ++A LF M + G +TVTYNSL+
Sbjct: 111 VFEQLVARG---FRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLI 167
Query: 247 S-FETNYK--EVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVR 303
S F K E + ++M G PDVV+Y L+N + K R ++A + +M G+
Sbjct: 168 SGFCRMGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLT 227
Query: 304 PTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKF 363
P + L+D + A + MRR CSP + +Y T+L Y + +E A KF
Sbjct: 228 PNVVTFTSLMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRVNQLEEARKF 287
Query: 364 FRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGK 423
L++ PNV+++ +I+G KVN + ME+ ++ R P+ ++TT++D +
Sbjct: 288 M--LEEMDCPPNVVSFNIMIRGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTVIDVLCR 345
Query: 424 NKDFDSAVVWYKEM 437
K D A Y++M
Sbjct: 346 EKKVDEACRVYRKM 359
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 78/337 (23%), Positives = 149/337 (44%), Gaps = 16/337 (4%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
LI+ K ++A +L M G P + ++T L+ + + + +A +F ++ + G
Sbjct: 60 LISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARG 119
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
RP +TY ++ + + KEA ++F ++ + P+ ++ +I + + G +
Sbjct: 120 FRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMI--KSGSCMPNTVTYNSLISGFCRMGKMD 177
Query: 222 KARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSKIYD---QMQRAGLQPDVVSYALLI 278
+A L MAE G VTY +LM+ + YD QM R GL P+VV++ L+
Sbjct: 178 EAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPNVVTFTSLM 237
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCS 338
+ + R +A+ + EM PT YN +LD + +++AR + C
Sbjct: 238 DGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRVNQLEEARKFM--LEEMDCP 295
Query: 339 PDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEI 398
P++ S+ M+ + A + ++ P+V+ Y T+I + +++ +
Sbjct: 296 PNVVSFNIMIRGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTVIDVLCREKKVDEACRV 355
Query: 399 YDKM-RVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWY 434
Y KM G PN ++T D+ WY
Sbjct: 356 YRKMLEEPGCLPNSITYSTF--------DYWPLQCWY 384
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 74/292 (25%), Positives = 135/292 (46%), Gaps = 6/292 (2%)
Query: 202 PDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYK---EVSKI 258
P ++ +I KA +A L M G TY +L++ K + ++
Sbjct: 52 PTAVTYNSLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRV 111
Query: 259 YDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAG-VRPTHKAYNILLDAFA 317
++Q+ G +PDVV+Y+ LI+ K R +EA+ +F M+ +G P YN L+ F
Sbjct: 112 FEQLVARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFC 171
Query: 318 ISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVI 377
G +D+A + + M SPD+ +YTT+++ + + ++ A ++ + G PNV+
Sbjct: 172 RMGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPNVV 231
Query: 378 TYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEM 437
T+ +L+ G + N L + I +MR P + TI+D Y + + A + E
Sbjct: 232 TFTSLMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRVNQLEEARKFMLEE 291
Query: 438 ESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGINGLSISVD 489
C PP+ + NI++ + +EA EL+ P + + +D
Sbjct: 292 MDC--PPNVVSFNIMIRGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTVID 341
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 76/289 (26%), Positives = 135/289 (46%), Gaps = 10/289 (3%)
Query: 99 FLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQ 158
+ LIT + K + A +V + +G+ P VV+++ L++ + GR K A +F RM
Sbjct: 92 YTTLITGFCKSKKSDDALRVFEQLVARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMI 151
Query: 159 SSGP-RPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKA 217
SG P+ +TY ++ F K EA + + + S PD + ++ + K
Sbjct: 152 KSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLERMAETGSS---PDVVTYTTLMNGFCKL 208
Query: 218 GGYEKARKLFALMAERGVQQSTVTYNSLM---SFETNYKEVSKIYDQMQRAGLQPDVVSY 274
+ A L M +G+ + VT+ SLM E + I +M+R P V +Y
Sbjct: 209 ARLDDAYDLLNQMTRKGLTPNVVTFTSLMDGLCRENRLSDAVHILGEMRRKSCSPTVYTY 268
Query: 275 ALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRR 334
+++ Y + + EEA E +D P ++NI++ +A + + RR
Sbjct: 269 NTILDGYCRVNQLEEARKFMLEEMDCP--PNVVSFNIMIRGLCKVNRSSEAMELVEEARR 326
Query: 335 DRCSPDICSYTTMLSAYVNASDMEGAEKFFRR-LKQDGFVPNVITYGTL 382
RC+PD+ YTT++ ++ A + +R+ L++ G +PN ITY T
Sbjct: 327 RRCNPDVVMYTTVIDVLCREKKVDEACRVYRKMLEEPGCLPNSITYSTF 375
>gi|449462483|ref|XP_004148970.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
Length = 917
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 92/355 (25%), Positives = 172/355 (48%), Gaps = 43/355 (12%)
Query: 101 MLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSS 160
+LI K+G +A K+L + ++G VV+ T L++ R A +F +MQ
Sbjct: 533 VLIDMLCKKGKVIEANKLLEVVIQRGCILDVVTCTTLVKGLCMKHRISKATQLFLKMQKL 592
Query: 161 GPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSP----LKPDQKMFHMMIYMYKK 216
G P+ +T ++K ++ K A E+ +L + SP KP+ + ++I K
Sbjct: 593 GCMPNVVTCATLMKGLCQSGNIKIALELHKNMLSD-TSPYGINCKPNAISYSIIIDGLCK 651
Query: 217 AGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSKIYDQMQRAGLQPDVVSYAL 276
G ++AR+LF +M+ G+ PDV+SY
Sbjct: 652 CGREDEARELF--------------------------------KEMKALGVIPDVISYTS 679
Query: 277 LINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDR 336
LI+ + ++ + ++A +F EM+D GV+P +++L+D G V +A + + M +
Sbjct: 680 LIHGFCRSGKWKDAKYLFNEMVDIGVQPDVTTFSVLIDMLCKEGKVIEANELLEVMIQRG 739
Query: 337 CSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMM 396
C P+ +YTT++ + A + F ++++ G +P+V+TYGTL+KG + N++ +
Sbjct: 740 CIPNTVTYTTLVKGLCMNDRISEATQLFMKMQKLGCLPDVVTYGTLMKGLCQTGNIKTAL 799
Query: 397 EIYDKMRVN------GIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPD 445
E++ KM + KP+ ++ I+D K+ D A +KEM++ G P+
Sbjct: 800 ELHKKMLSDTGQYGTNFKPDVISYSIIIDGLCKHGREDEARELFKEMKALGVIPN 854
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 89/377 (23%), Positives = 185/377 (49%), Gaps = 19/377 (5%)
Query: 129 PSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEV 188
P+++S++ +++ + R A +F+ M++ G P ++Y ++ F + K+++A+ +
Sbjct: 163 PTLISYSIIIDGLCKDRREDEARELFKEMKAQGMMPDVISYTSLIHGFCHSGKWEKAKCL 222
Query: 189 FMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSL--- 245
F +LD ++PD ++I M+ K G +A +L +M RG VTY++L
Sbjct: 223 FNEMLD---VGIQPDVTTSGVLIDMFCKEGKVIEANELLEVMVHRGCILDIVTYSTLIKG 279
Query: 246 MSFETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLD------ 299
+ + E ++++ M++ G +PD ++Y L+ + + AL + +EML+
Sbjct: 280 LCMKHRISEATQLFMSMKKLGCRPDAIAYGTLMKGLCQTGKINIALHLHQEMLNDTSQYG 339
Query: 300 -AGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDME 358
+RP ++L+D G V +A + + M + C DI +Y+T++ +
Sbjct: 340 IKCIRPDVTTSSMLIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMEHRIS 399
Query: 359 GAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVN----GIKPNQTI- 413
A F +++ G P+ ITYGTL+KG + N+ ++++ +M + GIK T+
Sbjct: 400 EATWLFMSMQKLGCRPDAITYGTLMKGLCQTGNINIALQLHQEMLNDTGRYGIKCKPTLI 459
Query: 414 -FTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNF 472
++ I+D K++ D A ++EM++ G PD + L+ + + +A L
Sbjct: 460 SYSIIIDGLCKDRREDEARELFEEMKAQGIMPDVISYTTLIHGFCLSGKWEKAKCLFNEM 519
Query: 473 NHPNNEPGINGLSISVD 489
+P + S+ +D
Sbjct: 520 LDVGIQPDVTTSSVLID 536
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 78/286 (27%), Positives = 150/286 (52%), Gaps = 14/286 (4%)
Query: 129 PSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEV 188
P+ +S++ +++ + GR A +F+ M++ G P ++Y ++ F + K+K+A+ +
Sbjct: 637 PNAISYSIIIDGLCKCGREDEARELFKEMKALGVIPDVISYTSLIHGFCRSGKWKDAKYL 696
Query: 189 FMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSL--- 245
F ++D ++PD F ++I M K G +A +L +M +RG +TVTY +L
Sbjct: 697 FNEMVD---IGVQPDVTTFSVLIDMLCKEGKVIEANELLEVMIQRGCIPNTVTYTTLVKG 753
Query: 246 MSFETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEML-DAG--- 301
+ E ++++ +MQ+ G PDVV+Y L+ + + AL + ++ML D G
Sbjct: 754 LCMNDRISEATQLFMKMQKLGCLPDVVTYGTLMKGLCQTGNIKTALELHKKMLSDTGQYG 813
Query: 302 --VRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEG 359
+P +Y+I++D G D+AR +FK M+ P++ SYT+++ + + +E
Sbjct: 814 TNFKPDVISYSIIIDGLCKHGREDEARELFKEMKALGVIPNVISYTSLIHGFCRSGKLED 873
Query: 360 AEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVN 405
A+ F + G N +TY +I G+ K ++K ++ KM N
Sbjct: 874 AKHLFNEMVDQGVQLNAVTYSVMIHGFCKEGQIDK--ALFQKMEAN 917
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 96/398 (24%), Positives = 180/398 (45%), Gaps = 41/398 (10%)
Query: 101 MLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSS 160
MLI K+G +A ++L M ++G +V+++ L++ R A +F MQ
Sbjct: 352 MLIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMEHRISEATWLFMSMQKL 411
Query: 161 GPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKS---PLKPDQKMFHMMIYMYKKA 217
G RP A+TY ++K + A ++ +L++ KP + ++I K
Sbjct: 412 GCRPDAITYGTLMKGLCQTGNINIALQLHQEMLNDTGRYGIKCKPTLISYSIIIDGLCKD 471
Query: 218 GGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSKIYDQMQRAGLQPDVVSYALL 277
++AR+LF ++M+ G+ PDV+SY L
Sbjct: 472 RREDEARELF--------------------------------EEMKAQGIMPDVISYTTL 499
Query: 278 INAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRC 337
I+ + + + E+A +F EMLD G++P ++L+D G V +A + + + + C
Sbjct: 500 IHGFCLSGKWEKAKCLFNEMLDVGIQPDVTTSSVLIDMLCKKGKVIEANKLLEVVIQRGC 559
Query: 338 SPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMME 397
D+ + TT++ + A + F ++++ G +PNV+T TL+KG + N++ +E
Sbjct: 560 ILDVVTCTTLVKGLCMKHRISKATQLFLKMQKLGCMPNVVTCATLMKGLCQSGNIKIALE 619
Query: 398 IYDKMRVN----GI--KPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNI 451
++ M + GI KPN ++ I+D K D A +KEM++ G PD +
Sbjct: 620 LHKNMLSDTSPYGINCKPNAISYSIIIDGLCKCGREDEARELFKEMKALGVIPDVISYTS 679
Query: 452 LLSLAKTADERNEANELLGNFNHPNNEPGINGLSISVD 489
L+ + + +A L +P + S+ +D
Sbjct: 680 LIHGFCRSGKWKDAKYLFNEMVDIGVQPDVTTFSVLID 717
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 90/391 (23%), Positives = 180/391 (46%), Gaps = 55/391 (14%)
Query: 129 PSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEV 188
P+++S++ +++ + R A +F M++ G P ++Y ++ F + K+++A+ +
Sbjct: 456 PTLISYSIIIDGLCKDRREDEARELFEEMKAQGIMPDVISYTTLIHGFCLSGKWEKAKCL 515
Query: 189 FMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSL--- 245
F +LD ++PD ++I M K G +A KL ++ +RG VT +L
Sbjct: 516 FNEMLD---VGIQPDVTTSSVLIDMLCKKGKVIEANKLLEVVIQRGCILDVVTCTTLVKG 572
Query: 246 MSFETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLD------ 299
+ + + ++++ +MQ+ G P+VV+ A L+ ++ + AL + + ML
Sbjct: 573 LCMKHRISKATQLFLKMQKLGCMPNVVTCATLMKGLCQSGNIKIALELHKNMLSDTSPYG 632
Query: 300 AGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEG 359
+P +Y+I++D G D+AR +FK M+ PD+ SYT+++ + + +
Sbjct: 633 INCKPNAISYSIIIDGLCKCGREDEARELFKEMKALGVIPDVISYTSLIHGFCRSGKWKD 692
Query: 360 AEKFFRRLK-----------------------------------QDGFVPNVITYGTLIK 384
A+ F + Q G +PN +TY TL+K
Sbjct: 693 AKYLFNEMVDIGVQPDVTTFSVLIDMLCKEGKVIEANELLEVMIQRGCIPNTVTYTTLVK 752
Query: 385 GYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMES----- 439
G + + + +++ KM+ G P+ + T+M + + +A+ +K+M S
Sbjct: 753 GLCMNDRISEATQLFMKMQKLGCLPDVVTYGTLMKGLCQTGNIKTALELHKKMLSDTGQY 812
Query: 440 -CGFPPDQKAKNILL-SLAKTADERNEANEL 468
F PD + +I++ L K E +EA EL
Sbjct: 813 GTNFKPDVISYSIIIDGLCKHGRE-DEAREL 842
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 81/333 (24%), Positives = 148/333 (44%), Gaps = 42/333 (12%)
Query: 101 MLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSS 160
MLI K+G +A ++L M ++G +V+++ L++ R A +F MQ
Sbjct: 59 MLIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMEHRISEATWLFMSMQKL 118
Query: 161 GPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKS---PLKPDQKMFHMMIYMYKKA 217
G RP A+TY ++K + A ++ +L++ KP + ++I K
Sbjct: 119 GCRPDAITYGTLMKGLCQTGNINIALQLHQEMLNDTGRYGIKCKPTLISYSIIIDGLCKD 178
Query: 218 GGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSKIYDQMQRAGLQPDVVSYALL 277
++AR+LF +M+ G+ PDV+SY L
Sbjct: 179 RREDEARELF--------------------------------KEMKAQGMMPDVISYTSL 206
Query: 278 INAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRC 337
I+ + + + E+A +F EMLD G++P +L+D F G V +A + + M C
Sbjct: 207 IHGFCHSGKWEKAKCLFNEMLDVGIQPDVTTSGVLIDMFCKEGKVIEANELLEVMVHRGC 266
Query: 338 SPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMME 397
DI +Y+T++ + A + F +K+ G P+ I YGTL+KG + + +
Sbjct: 267 ILDIVTYSTLIKGLCMKHRISEATQLFMSMKKLGCRPDAIAYGTLMKGLCQTGKINIALH 326
Query: 398 IYDKMR-------VNGIKPNQTIFTTIMDAYGK 423
++ +M + I+P+ T + ++D K
Sbjct: 327 LHQEMLNDTSQYGIKCIRPDVTTSSMLIDILCK 359
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 85/371 (22%), Positives = 157/371 (42%), Gaps = 59/371 (15%)
Query: 157 MQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSP------LKPDQKMFHMM 210
M+ +G P + T+ I++ + E ++ P ++PD M+
Sbjct: 1 MRLAGLFPDSFTFNILINCLCNVKRVNEGLAAMAGIMRRGYIPDIVTYSIRPDVTTSSML 60
Query: 211 IYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSL---MSFETNYKEVSKIYDQMQRAGL 267
I + K G +A +L +M +RG VTY++L + E E + ++ MQ+ G
Sbjct: 61 IDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMEHRISEATWLFMSMQKLGC 120
Query: 268 QPDVVSYALLINAYGKARREEEALAVFEEML-DAG-----VRPTHKAYNILLDAFAISGM 321
+PD ++Y L+ + AL + +EML D G +PT +Y+I++D
Sbjct: 121 RPDAITYGTLMKGLCQTGNINIALQLHQEMLNDTGRYGIKCKPTLISYSIIIDGLCKDRR 180
Query: 322 VDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNV----- 376
D+AR +FK M+ PD+ SYT+++ + ++ E A+ F + G P+V
Sbjct: 181 EDEARELFKEMKAQGMMPDVISYTSLIHGFCHSGKWEKAKCLFNEMLDVGIQPDVTTSGV 240
Query: 377 ------------------------------ITYGTLIKGYAKVNNLEKMMEIYDKMRVNG 406
+TY TLIKG + + + +++ M+ G
Sbjct: 241 LIDMFCKEGKVIEANELLEVMVHRGCILDIVTYSTLIKGLCMKHRISEATQLFMSMKKLG 300
Query: 407 IKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMES--------CGFPPDQKAKNILLSLAKT 458
+P+ + T+M + + A+ ++EM + C PD ++L+ +
Sbjct: 301 CRPDAIAYGTLMKGLCQTGKINIALHLHQEMLNDTSQYGIKC-IRPDVTTSSMLIDILCK 359
Query: 459 ADERNEANELL 469
+ EANELL
Sbjct: 360 EGKVIEANELL 370
>gi|357139998|ref|XP_003571561.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
distachyon]
Length = 807
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 108/457 (23%), Positives = 201/457 (43%), Gaps = 22/457 (4%)
Query: 18 VFKDAADEAGKKNWRRLMNQIEEVGSAVAVLRSERTRGQPLPKDLVLGTLVRLKQLKKWN 77
V K D+ G+ W A+ +LR +G P ++V+ + V + L K
Sbjct: 180 VLKSVCDD-GRSQW------------ALDILRMAVKQGGGCPCNVVVYSTV-VHGLFKEG 225
Query: 78 VVSEVLEWLR--IQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHT 135
V E + Q N + + +I A K +KA+ +L M G P V++
Sbjct: 226 KVGEACDLFHEMTQQGVPPNVVTYNSVIHALCKARAVDKAQGILRQMVGNGVQPDNVTYN 285
Query: 136 ALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDE 195
L+ Y G++K A +F+ M S G P+ +T + + + +EA E F ++L +
Sbjct: 286 TLIHGYSTLGQWKQAVRMFKEMTSRGVIPNTVTCSTFVAFLCKHGRIEEAREFFDSMLAK 345
Query: 196 EKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETN---Y 252
K + + +++ Y AG LF LM G+ + +N L++
Sbjct: 346 GH---KLNIISYSTLLHGYATAGCLVDMSNLFNLMVRDGIVPNQHVFNILVNGYAKCGMV 402
Query: 253 KEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNIL 312
+E I++ MQ+ GL PDV++Y +I+A+ + ++A+ F M+D GV P Y L
Sbjct: 403 REAMFIFEDMQKRGLNPDVLTYLAVIHAFCRMGSMDDAMDKFNHMIDKGVEPNFAVYQCL 462
Query: 313 LDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGF 372
+ F G + +A + +R P I S+ ++++ + A++ F + + G
Sbjct: 463 IQGFCTHGDLVKAEELVYEIRNKGLGPCILSFASLINHLCKEGRVFEAQRIFDMIIRTGE 522
Query: 373 VPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVV 432
+V + +LI GY + + + ++D M GI+P+ + T+++ KN D ++
Sbjct: 523 KADVNIFTSLIDGYCLIGKMSEAFRVHDAMVSVGIEPDIVTYGTLVNGCCKNGRIDDGLI 582
Query: 433 WYKEMESCGFPPDQKAKNILLSLAKTADERNEANELL 469
++E+ G P I+L A A E+
Sbjct: 583 LFRELLHKGVKPTTFTYGIILDGLFHAGRTAAAKEMF 619
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 93/385 (24%), Positives = 172/385 (44%), Gaps = 5/385 (1%)
Query: 101 MLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNA-EAIFRRMQS 159
+LI + + A + ++G V+ ++L+ R A + +F RM
Sbjct: 108 ILIDCCCRARRLDLAFAFFGCLLRQGMKADVIVVSSLLRGLCDAKRTDEAVDVLFHRMPE 167
Query: 160 SGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGG 219
G P A++Y +LK + + + A ++ + + ++ + ++ +++ K G
Sbjct: 168 LGCVPDAISYSTVLKSVCDDGRSQWALDI-LRMAVKQGGGCPCNVVVYSTVVHGLFKEGK 226
Query: 220 YEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSK---IYDQMQRAGLQPDVVSYAL 276
+A LF M ++GV + VTYNS++ + V K I QM G+QPD V+Y
Sbjct: 227 VGEACDLFHEMTQQGVPPNVVTYNSVIHALCKARAVDKAQGILRQMVGNGVQPDNVTYNT 286
Query: 277 LINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDR 336
LI+ Y + ++A+ +F+EM GV P + + G +++AR F M
Sbjct: 287 LIHGYSTLGQWKQAVRMFKEMTSRGVIPNTVTCSTFVAFLCKHGRIEEAREFFDSMLAKG 346
Query: 337 CSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMM 396
+I SY+T+L Y A + F + +DG VPN + L+ GYAK + + M
Sbjct: 347 HKLNIISYSTLLHGYATAGCLVDMSNLFNLMVRDGIVPNQHVFNILVNGYAKCGMVREAM 406
Query: 397 EIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLA 456
I++ M+ G+ P+ + ++ A+ + D A+ + M G P+ L+
Sbjct: 407 FIFEDMQKRGLNPDVLTYLAVIHAFCRMGSMDDAMDKFNHMIDKGVEPNFAVYQCLIQGF 466
Query: 457 KTADERNEANELLGNFNHPNNEPGI 481
T + +A EL+ + P I
Sbjct: 467 CTHGDLVKAEELVYEIRNKGLGPCI 491
Score = 121 bits (304), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 97/413 (23%), Positives = 171/413 (41%), Gaps = 41/413 (9%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N+ F +L+ Y K G +A + M K+G P V+++ A++ A+ R G +A F
Sbjct: 385 NQHVFNILVNGYAKCGMVREAMFIFEDMQKRGLNPDVLTYLAVIHAFCRMGSMDDAMDKF 444
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
M G P+ YQ +++ F +AEE+ + + L P F +I
Sbjct: 445 NHMIDKGVEPNFAVYQCLIQGFCTHGDLVKAEEL---VYEIRNKGLGPCILSFASLINHL 501
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSLM---SFETNYKEVSKIYDQMQRAGLQPDV 271
K G +A+++F ++ G + + SL+ E +++D M G++PD+
Sbjct: 502 CKEGRVFEAQRIFDMIIRTGEKADVNIFTSLIDGYCLIGKMSEAFRVHDAMVSVGIEPDI 561
Query: 272 VSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKC 331
V+Y L+N K R ++ L +F E+L GV+PT Y I+LD +G A+ +F+
Sbjct: 562 VTYGTLVNGCCKNGRIDDGLILFRELLHKGVKPTTFTYGIILDGLFHAGRTAAAKEMFQE 621
Query: 332 M-------------------RRDRCSP----------------DICSYTTMLSAYVNASD 356
M R+ C+ DI M+S A
Sbjct: 622 MIESGIAVTIPTYSILLTGLCRNNCTEEAITVFQKLCAMNVKFDIVILNIMISKMFKARR 681
Query: 357 MEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTT 416
E AE F + G VP V TY +++ K ++E+ ++ M +G+ P
Sbjct: 682 REEAEGLFASIPDYGLVPTVQTYTIMMENLIKEGSVEEAEGVFSVMLKSGLSPTSHFINV 741
Query: 417 IMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELL 469
I+ + + A ++ ++ + ++LLSL + E LL
Sbjct: 742 IVRTLLEKGEIVKAGIYMCRVDGKSILFEASTASMLLSLFSCKGKHREHLNLL 794
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 80/322 (24%), Positives = 152/322 (47%), Gaps = 7/322 (2%)
Query: 129 PSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEV 188
P+V +++ L++ R R A A F + G + + +L+ +A + EA +V
Sbjct: 101 PTVYTYSILIDCCCRARRLDLAFAFFGCLLRQGMKADVIVVSSLLRGLCDAKRTDEAVDV 160
Query: 189 FMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERG--VQQSTVTYNSLM 246
+ E PD + ++ G + A + + ++G + V Y++++
Sbjct: 161 LFHRMPELGC--VPDAISYSTVLKSVCDDGRSQWALDILRMAVKQGGGCPCNVVVYSTVV 218
Query: 247 SF---ETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVR 303
E E ++ +M + G+ P+VV+Y +I+A KAR ++A + +M+ GV+
Sbjct: 219 HGLFKEGKVGEACDLFHEMTQQGVPPNVVTYNSVIHALCKARAVDKAQGILRQMVGNGVQ 278
Query: 304 PTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKF 363
P + YN L+ ++ G QA +FK M P+ + +T ++ +E A +F
Sbjct: 279 PDNVTYNTLIHGYSTLGQWKQAVRMFKEMTSRGVIPNTVTCSTFVAFLCKHGRIEEAREF 338
Query: 364 FRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGK 423
F + G N+I+Y TL+ GYA L M +++ M +GI PNQ +F +++ Y K
Sbjct: 339 FDSMLAKGHKLNIISYSTLLHGYATAGCLVDMSNLFNLMVRDGIVPNQHVFNILVNGYAK 398
Query: 424 NKDFDSAVVWYKEMESCGFPPD 445
A+ +++M+ G PD
Sbjct: 399 CGMVREAMFIFEDMQKRGLNPD 420
Score = 119 bits (298), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 84/385 (21%), Positives = 167/385 (43%), Gaps = 6/385 (1%)
Query: 108 KQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSAL 167
K G +A + M KG+ +++S++ L+ Y G + +F M G P+
Sbjct: 328 KHGRIEEAREFFDSMLAKGHKLNIISYSTLLHGYATAGCLVDMSNLFNLMVRDGIVPNQH 387
Query: 168 TYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLF 227
+ I++ + + +EA +F D +K L PD + +I+ + + G + A F
Sbjct: 388 VFNILVNGYAKCGMVREAMFIFE---DMQKRGLNPDVLTYLAVIHAFCRMGSMDDAMDKF 444
Query: 228 ALMAERGVQQSTVTYNSLMSFETNYKEVSK---IYDQMQRAGLQPDVVSYALLINAYGKA 284
M ++GV+ + Y L+ + ++ K + +++ GL P ++S+A LIN K
Sbjct: 445 NHMIDKGVEPNFAVYQCLIQGFCTHGDLVKAEELVYEIRNKGLGPCILSFASLINHLCKE 504
Query: 285 RREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSY 344
R EA +F+ ++ G + + L+D + + G + +A V M PDI +Y
Sbjct: 505 GRVFEAQRIFDMIIRTGEKADVNIFTSLIDGYCLIGKMSEAFRVHDAMVSVGIEPDIVTY 564
Query: 345 TTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRV 404
T+++ ++ FR L G P TYG ++ G E++ +M
Sbjct: 565 GTLVNGCCKNGRIDDGLILFRELLHKGVKPTTFTYGIILDGLFHAGRTAAAKEMFQEMIE 624
Query: 405 NGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNE 464
+GI ++ ++ +N + A+ ++++ + D NI++S A R E
Sbjct: 625 SGIAVTIPTYSILLTGLCRNNCTEEAITVFQKLCAMNVKFDIVILNIMISKMFKARRREE 684
Query: 465 ANELLGNFNHPNNEPGINGLSISVD 489
A L + P + +I ++
Sbjct: 685 AEGLFASIPDYGLVPTVQTYTIMME 709
>gi|115435438|ref|NP_001042477.1| Os01g0228400 [Oryza sativa Japonica Group]
gi|17385740|dbj|BAB78680.1| putative leaf protein [Oryza sativa Japonica Group]
gi|113532008|dbj|BAF04391.1| Os01g0228400 [Oryza sativa Japonica Group]
gi|215740499|dbj|BAG97155.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 636
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 80/332 (24%), Positives = 176/332 (53%), Gaps = 11/332 (3%)
Query: 99 FLMLITAYGKQGDFNKAEKVLSFMNKKGYA------PSVVSHTALMEAYGRGGRYKNAEA 152
F LI YG G ++++V M G P++ ++ L++A+ GR + A
Sbjct: 187 FNTLIKGYGIAGRPEESQRVFDMMASGGAGGEAAVRPNLTTYNILVKAWCDAGRLEEAWR 246
Query: 153 IFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIY 212
+ RM++SG P +TY + + + ++ AEE+ + + +++ L+ ++ + +++
Sbjct: 247 VVARMRASGADPDVVTYNTLASAYAKNDETWRAEELVVEM--AQQAGLRTSERTWGIIVG 304
Query: 213 MYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSKIYDQ---MQRAGLQP 269
Y + G +A + M + GV + + +N+L+ + +++ + D M++ G++P
Sbjct: 305 GYCREGRLGEALRCVRQMKDSGVLPNVIVFNTLLKGFLDANDMAAVDDVLGLMEQFGIKP 364
Query: 270 DVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVF 329
D+V+Y+ +NA + + VF++M++AG+ P + Y+IL + + ++A +
Sbjct: 365 DIVTYSHQLNALSSMGHMAKCMKVFDKMIEAGIEPDPQVYSILAKGYVRAQQPEKAEELL 424
Query: 330 KCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKV 389
+ M R P++ ++TT++S + + +DM A + + ++ G PN+ T+ TLI GY+++
Sbjct: 425 RQMGRLGVRPNVVTFTTVISGWCSVADMGNAVRVYAAMRDAGVRPNLRTFETLIWGYSEL 484
Query: 390 NNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAY 421
K E+ M+ G++P QT + + DA+
Sbjct: 485 KQPWKAEEVLQMMQDAGVRPKQTTYCLVADAW 516
Score = 141 bits (356), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 95/364 (26%), Positives = 166/364 (45%), Gaps = 7/364 (1%)
Query: 97 MDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRR 156
+ + L+ A Q F+ +L+ + G P + AL+ A R A F R
Sbjct: 115 VTYTTLLAALTSQRAFDTIPWLLAEVEDAGLRPDSIFFNALINALVEARRMGEATNTFLR 174
Query: 157 MQSSGPRPSALTYQIILKLFVEANKFKEAEEVF---MTLLDEEKSPLKPDQKMFHMMIYM 213
M SG RP+A T+ ++K + A + +E++ VF + ++ ++P+ +++++
Sbjct: 175 MGHSGCRPTASTFNTLIKGYGIAGRPEESQRVFDMMASGGAGGEAAVRPNLTTYNILVKA 234
Query: 214 YKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSK----IYDQMQRAGLQP 269
+ AG E+A ++ A M G VTYN+L S E + + + Q+AGL+
Sbjct: 235 WCDAGRLEEAWRVVARMRASGADPDVVTYNTLASAYAKNDETWRAEELVVEMAQQAGLRT 294
Query: 270 DVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVF 329
++ +++ Y + R EAL +M D+GV P +N LL F + + V
Sbjct: 295 SERTWGIIVGGYCREGRLGEALRCVRQMKDSGVLPNVIVFNTLLKGFLDANDMAAVDDVL 354
Query: 330 KCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKV 389
M + PDI +Y+ L+A + M K F ++ + G P+ Y L KGY +
Sbjct: 355 GLMEQFGIKPDIVTYSHQLNALSSMGHMAKCMKVFDKMIEAGIEPDPQVYSILAKGYVRA 414
Query: 390 NNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAK 449
EK E+ +M G++PN FTT++ + D +AV Y M G P+ +
Sbjct: 415 QQPEKAEELLRQMGRLGVRPNVVTFTTVISGWCSVADMGNAVRVYAAMRDAGVRPNLRTF 474
Query: 450 NILL 453
L+
Sbjct: 475 ETLI 478
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 81/345 (23%), Positives = 168/345 (48%), Gaps = 17/345 (4%)
Query: 113 NKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQII 172
++A + G+ PS+V++T L+ A + + ++ +G RP ++ + +
Sbjct: 96 HQAHSAFRHLVDDGHRPSLVTYTTLLAALTSQRAFDTIPWLLAEVEDAGLRPDSIFFNAL 155
Query: 173 LKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALM-- 230
+ VEA + EA F+ + S +P F+ +I Y AG E+++++F +M
Sbjct: 156 INALVEARRMGEATNTFLRM---GHSGCRPTASTFNTLIKGYGIAGRPEESQRVFDMMAS 212
Query: 231 ----AERGVQQSTVTYNSLMSFETN---YKEVSKIYDQMQRAGLQPDVVSYALLINAYGK 283
E V+ + TYN L+ + +E ++ +M+ +G PDVV+Y L +AY K
Sbjct: 213 GGAGGEAAVRPNLTTYNILVKAWCDAGRLEEAWRVVARMRASGADPDVVTYNTLASAYAK 272
Query: 284 ---ARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPD 340
R EE V E AG+R + + + I++ + G + +A + M+ P+
Sbjct: 273 NDETWRAEE--LVVEMAQQAGLRTSERTWGIIVGGYCREGRLGEALRCVRQMKDSGVLPN 330
Query: 341 ICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYD 400
+ + T+L +++A+DM + ++Q G P+++TY + + + ++ K M+++D
Sbjct: 331 VIVFNTLLKGFLDANDMAAVDDVLGLMEQFGIKPDIVTYSHQLNALSSMGHMAKCMKVFD 390
Query: 401 KMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPD 445
KM GI+P+ +++ + Y + + + A ++M G P+
Sbjct: 391 KMIEAGIEPDPQVYSILAKGYVRAQQPEKAEELLRQMGRLGVRPN 435
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/234 (23%), Positives = 117/234 (50%), Gaps = 6/234 (2%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
+E + +++ Y ++G +A + + M G P+V+ L++ + + +
Sbjct: 295 SERTWGIIVGGYCREGRLGEALRCVRQMKDSGVLPNVIVFNTLLKGFLDANDMAAVDDVL 354
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
M+ G +P +TY L + +VF +++ + ++PD +++ ++ Y
Sbjct: 355 GLMEQFGIKPDIVTYSHQLNALSSMGHMAKCMKVFDKMIE---AGIEPDPQVYSILAKGY 411
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVS---KIYDQMQRAGLQPDV 271
+A EKA +L M GV+ + VT+ +++S + ++ ++Y M+ AG++P++
Sbjct: 412 VRAQQPEKAEELLRQMGRLGVRPNVVTFTTVISGWCSVADMGNAVRVYAAMRDAGVRPNL 471
Query: 272 VSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQA 325
++ LI Y + ++ +A V + M DAGVRP Y ++ DA+ G+V+ A
Sbjct: 472 RTFETLIWGYSELKQPWKAEEVLQMMQDAGVRPKQTTYCLVADAWKAVGLVENA 525
Score = 43.5 bits (101), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 27/123 (21%), Positives = 51/123 (41%), Gaps = 1/123 (0%)
Query: 331 CMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVN 390
C + C I + T + A ++A A FR L DG P+++TY TL+
Sbjct: 70 CGKGHTCQAVI-ARTRQMRAMIDARRPHQAHSAFRHLVDDGHRPSLVTYTTLLAALTSQR 128
Query: 391 NLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKN 450
+ + + ++ G++P+ F +++A + + A + M G P N
Sbjct: 129 AFDTIPWLLAEVEDAGLRPDSIFFNALINALVEARRMGEATNTFLRMGHSGCRPTASTFN 188
Query: 451 ILL 453
L+
Sbjct: 189 TLI 191
>gi|224096624|ref|XP_002310676.1| predicted protein [Populus trichocarpa]
gi|222853579|gb|EEE91126.1| predicted protein [Populus trichocarpa]
Length = 424
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 93/368 (25%), Positives = 171/368 (46%), Gaps = 9/368 (2%)
Query: 108 KQGDFNKAEKVLSFMNK---KGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRP 164
++G F + L+ N+ + P ++ L+ + R +Y+ ++F+ M+ G +
Sbjct: 14 RKGYFGNLDDALASFNRMLDRNPQPPIIEFNRLLSSVVRMKKYETVVSLFKEMEFRGIKY 73
Query: 165 SALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKAR 224
+ T I++ F + VF L K KPD +F +I + G E A
Sbjct: 74 NVCTLSILINCFCFLHHVDYGFSVFGKTL---KRGFKPDVVIFTTLIDGVCRIGKTELAA 130
Query: 225 KLFALMAERGVQQSTVTYNSLM---SFETNYKEVSKIYDQMQRAGLQPDVVSYALLINAY 281
L M G VT NSLM + +V KI+ M GL+PDV SY++ IN Y
Sbjct: 131 GLLKEMGLVGCVPDVVTCNSLMRGYCSQGKIDKVRKIFHLMVSKGLKPDVYSYSIFINGY 190
Query: 282 GKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDI 341
K + +EA+ +F+EM GV P YN L+ A + A+ +F+ M SPDI
Sbjct: 191 CKVEKIDEAMELFDEMSHRGVVPNAVTYNTLIKALCQALRPRDAQVLFRKMCACGLSPDI 250
Query: 342 CSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDK 401
+Y+T+L + +++ F+ +++ P+++ Y +I G + ++ E+ +
Sbjct: 251 LAYSTLLDGFCKQGNLDEMLVLFQEMQRRLVKPDLVVYTIIINGMCRSRKVKDAKEVLSR 310
Query: 402 MRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADE 461
+ V G+KP+ +T ++D + A+ +++ME G P + N+LL ++
Sbjct: 311 LIVEGLKPDVHTYTALVDGLCREGSIIEALRLFRKMEEDGCMPGSCSYNVLLQGCLQHND 370
Query: 462 RNEANELL 469
+ +L+
Sbjct: 371 TSTVVQLI 378
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 67/273 (24%), Positives = 124/273 (45%), Gaps = 3/273 (1%)
Query: 220 YEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVS---KIYDQMQRAGLQPDVVSYAL 276
YE LF M RG++ + T + L++ V ++ + + G +PDVV +
Sbjct: 56 YETVVSLFKEMEFRGIKYNVCTLSILINCFCFLHHVDYGFSVFGKTLKRGFKPDVVIFTT 115
Query: 277 LINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDR 336
LI+ + + E A + +EM G P N L+ + G +D+ R +F M
Sbjct: 116 LIDGVCRIGKTELAAGLLKEMGLVGCVPDVVTCNSLMRGYCSQGKIDKVRKIFHLMVSKG 175
Query: 337 CSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMM 396
PD+ SY+ ++ Y ++ A + F + G VPN +TY TLIK +
Sbjct: 176 LKPDVYSYSIFINGYCKVEKIDEAMELFDEMSHRGVVPNAVTYNTLIKALCQALRPRDAQ 235
Query: 397 EIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLA 456
++ KM G+ P+ ++T++D + K + D +V ++EM+ PD I+++
Sbjct: 236 VLFRKMCACGLSPDILAYSTLLDGFCKQGNLDEMLVLFQEMQRRLVKPDLVVYTIIINGM 295
Query: 457 KTADERNEANELLGNFNHPNNEPGINGLSISVD 489
+ + +A E+L +P ++ + VD
Sbjct: 296 CRSRKVKDAKEVLSRLIVEGLKPDVHTYTALVD 328
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/242 (23%), Positives = 111/242 (45%), Gaps = 2/242 (0%)
Query: 259 YDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAI 318
+++M QP ++ + L+++ + ++ E +++F+EM G++ +IL++ F
Sbjct: 28 FNRMLDRNPQPPIIEFNRLLSSVVRMKKYETVVSLFKEMEFRGIKYNVCTLSILINCFCF 87
Query: 319 SGMVDQARTVF-KCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVI 377
VD +VF K ++R PD+ +TT++ E A + + G VP+V+
Sbjct: 88 LHHVDYGFSVFGKTLKRGF-KPDVVIFTTLIDGVCRIGKTELAAGLLKEMGLVGCVPDVV 146
Query: 378 TYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEM 437
T +L++GY ++K+ +I+ M G+KP+ ++ ++ Y K + D A+ + EM
Sbjct: 147 TCNSLMRGYCSQGKIDKVRKIFHLMVSKGLKPDVYSYSIFINGYCKVEKIDEAMELFDEM 206
Query: 438 ESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGINGLSISVDEEDDDDDD 497
G P+ N L+ A +A L P I S +D +
Sbjct: 207 SHRGVVPNAVTYNTLIKALCQALRPRDAQVLFRKMCACGLSPDILAYSTLLDGFCKQGNL 266
Query: 498 DE 499
DE
Sbjct: 267 DE 268
>gi|357521009|ref|XP_003630793.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355524815|gb|AET05269.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 584
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 94/349 (26%), Positives = 171/349 (48%), Gaps = 9/349 (2%)
Query: 130 SVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVF 189
+V+S T LM R G+ A IF + G +P+ +TY ++ +F +
Sbjct: 42 TVISRTKLMSTLIRKGKPHEAVTIFNSLTEEGHKPTIITYTTLVAALTRLKRFNSIPSLL 101
Query: 190 MTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLM--- 246
+ E++ +KPD +F+ MI + +G +A K+F M E G + +T T+N+L+
Sbjct: 102 SKV---EENGVKPDSILFNAMINAFSDSGKVHEAMKIFRKMKECGCKPTTSTFNTLIKGF 158
Query: 247 SFETNYKEVSKIYDQM-QRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPT 305
E K+ + M Q ++P+ +Y +LI A+ EEA V +M+++G++P
Sbjct: 159 GIVGRPHEAMKLLEMMIQDGNVKPNERTYNILIQAWCTKNELEEAWNVMHKMVNSGMQPD 218
Query: 306 HKAYNILLDAFAISGMVDQARTVFKCMRR--DRCSPDICSYTTMLSAYVNASDMEGAEKF 363
YN L AFA +G D A + M++ ++ P+ + ++ Y +M A +F
Sbjct: 219 IVTYNTLARAFAQNGETDNAERLILKMQQYNNKVKPNERTCGIIIRGYCKEGNMTEALRF 278
Query: 364 FRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGK 423
++K+ G PN + + +LIKGY + + + + E M GIKP+ ++TIM+A+
Sbjct: 279 LYKMKELGVHPNPVVFNSLIKGYLDITDTDGVEEALTLMEEFGIKPDVVTYSTIMNAWSS 338
Query: 424 NKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNF 472
+ D+ + +M PD +A +IL A + ++A LL +
Sbjct: 339 SGLMDNCEEIFDDMVKAEIEPDIQAYSILAKGYVRAGQPDKAEALLNSM 387
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 91/378 (24%), Positives = 173/378 (45%), Gaps = 7/378 (1%)
Query: 97 MDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRR 156
+ + L+ A + FN +LS + + G P + A++ A+ G+ A IFR+
Sbjct: 79 ITYTTLVAALTRLKRFNSIPSLLSKVEENGVKPDSILFNAMINAFSDSGKVHEAMKIFRK 138
Query: 157 MQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKK 216
M+ G +P+ T+ ++K F + EA ++ ++ + +KP+++ ++++I +
Sbjct: 139 MKECGCKPTTSTFNTLIKGFGIVGRPHEAMKLLEMMIQDGN--VKPNERTYNILIQAWCT 196
Query: 217 AGGYEKARKLFALMAERGVQQSTVTYNSL-----MSFETNYKEVSKIYDQMQRAGLQPDV 271
E+A + M G+Q VTYN+L + ET+ E + Q ++P+
Sbjct: 197 KNELEEAWNVMHKMVNSGMQPDIVTYNTLARAFAQNGETDNAERLILKMQQYNNKVKPNE 256
Query: 272 VSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKC 331
+ ++I Y K EAL +M + GV P +N L+ + D
Sbjct: 257 RTCGIIIRGYCKEGNMTEALRFLYKMKELGVHPNPVVFNSLIKGYLDITDTDGVEEALTL 316
Query: 332 MRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNN 391
M PD+ +Y+T+++A+ ++ M+ E+ F + + P++ Y L KGY +
Sbjct: 317 MEEFGIKPDVVTYSTIMNAWSSSGLMDNCEEIFDDMVKAEIEPDIQAYSILAKGYVRAGQ 376
Query: 392 LEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNI 451
+K + + M G++ N IFTTI+ + D A+ Y++M G P + K
Sbjct: 377 PDKAEALLNSMTKYGLQANVVIFTTIISGWCAAGKMDCALRLYEKMNEMGTPLNLKTYET 436
Query: 452 LLSLAKTADERNEANELL 469
L+ A + +A ELL
Sbjct: 437 LIWGYGEAKQPWKAEELL 454
Score = 115 bits (289), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 77/318 (24%), Positives = 145/318 (45%), Gaps = 39/318 (12%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
NE + +LI A+ + + +A V+ M G P +V++ L A+ + G NAE +
Sbjct: 183 NERTYNILIQAWCTKNELEEAWNVMHKMVNSGMQPDIVTYNTLARAFAQNGETDNAERLI 242
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
+MQ + + +KP+++ ++I Y
Sbjct: 243 LKMQ------------------------------------QYNNKVKPNERTCGIIIRGY 266
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFE---TNYKEVSKIYDQMQRAGLQPDV 271
K G +A + M E GV + V +NSL+ T+ V + M+ G++PDV
Sbjct: 267 CKEGNMTEALRFLYKMKELGVHPNPVVFNSLIKGYLDITDTDGVEEALTLMEEFGIKPDV 326
Query: 272 VSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKC 331
V+Y+ ++NA+ + + +F++M+ A + P +AY+IL + +G D+A +
Sbjct: 327 VTYSTIMNAWSSSGLMDNCEEIFDDMVKAEIEPDIQAYSILAKGYVRAGQPDKAEALLNS 386
Query: 332 MRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNN 391
M + ++ +TT++S + A M+ A + + ++ + G N+ TY TLI GY +
Sbjct: 387 MTKYGLQANVVIFTTIISGWCAAGKMDCALRLYEKMNEMGTPLNLKTYETLIWGYGEAKQ 446
Query: 392 LEKMMEIYDKMRVNGIKP 409
K E+ M +G+ P
Sbjct: 447 PWKAEELLVTMEESGVAP 464
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/209 (23%), Positives = 95/209 (45%), Gaps = 1/209 (0%)
Query: 271 VVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFK 330
V+S L++ + + EA+ +F + + G +PT Y L+ A + ++
Sbjct: 43 VISRTKLMSTLIRKGKPHEAVTIFNSLTEEGHKPTIITYTTLVAALTRLKRFNSIPSLLS 102
Query: 331 CMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVN 390
+ + PD + M++A+ ++ + A K FR++K+ G P T+ TLIKG+ V
Sbjct: 103 KVEENGVKPDSILFNAMINAFSDSGKVHEAMKIFRKMKECGCKPTTSTFNTLIKGFGIVG 162
Query: 391 NLEKMMEIYDKMRVNG-IKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAK 449
+ M++ + M +G +KPN+ + ++ A+ + + A +M + G PD
Sbjct: 163 RPHEAMKLLEMMIQDGNVKPNERTYNILIQAWCTKNELEEAWNVMHKMVNSGMQPDIVTY 222
Query: 450 NILLSLAKTADERNEANELLGNFNHPNNE 478
N L E + A L+ NN+
Sbjct: 223 NTLARAFAQNGETDNAERLILKMQQYNNK 251
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 36/148 (24%), Positives = 69/148 (46%), Gaps = 2/148 (1%)
Query: 322 VDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGT 381
D++R + CM + C + S T ++S + A F L ++G P +ITY T
Sbjct: 26 CDESRCLI-CMGSNSCQ-TVISRTKLMSTLIRKGKPHEAVTIFNSLTEEGHKPTIITYTT 83
Query: 382 LIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCG 441
L+ ++ + + K+ NG+KP+ +F +++A+ + A+ +++M+ CG
Sbjct: 84 LVAALTRLKRFNSIPSLLSKVEENGVKPDSILFNAMINAFSDSGKVHEAMKIFRKMKECG 143
Query: 442 FPPDQKAKNILLSLAKTADERNEANELL 469
P N L+ +EA +LL
Sbjct: 144 CKPTTSTFNTLIKGFGIVGRPHEAMKLL 171
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 87/186 (46%), Gaps = 6/186 (3%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + F LI Y D + E+ L+ M + G P VV+++ +M A+ G N E IF
Sbjct: 290 NPVVFNSLIKGYLDITDTDGVEEALTLMEEFGIKPDVVTYSTIMNAWSSSGLMDNCEEIF 349
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
M + P Y I+ K +V A + +AE + ++ K L+ + +F +I +
Sbjct: 350 DDMVKAEIEPDIQAYSILAKGYVRAGQPDKAEALLNSM---TKYGLQANVVIFTTIISGW 406
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKE---VSKIYDQMQRAGLQPDV 271
AG + A +L+ M E G + TY +L+ K+ ++ M+ +G+ P++
Sbjct: 407 CAAGKMDCALRLYEKMNEMGTPLNLKTYETLIWGYGEAKQPWKAEELLVTMEESGVAPEM 466
Query: 272 VSYALL 277
+ L+
Sbjct: 467 STIELV 472
>gi|297800058|ref|XP_002867913.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297313749|gb|EFH44172.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 724
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 94/342 (27%), Positives = 175/342 (51%), Gaps = 7/342 (2%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N ++F LI K+G +A ++L M + G+ P+V +HTAL++ + G + A +F
Sbjct: 309 NLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEKAFRLF 368
Query: 155 RRM-QSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYM 213
++ +S +P+ TY ++ + + +K AE +F + ++ L P+ + +I
Sbjct: 369 LKLVRSDIYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRM---KEQGLFPNVNTYTTLING 425
Query: 214 YKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSKIYDQMQRA---GLQPD 270
+ KAG +++A +L LM + G + + TYN+++ + Y+ + +A GL+ D
Sbjct: 426 HCKAGNFDRAYELMNLMDDEGFRPNIYTYNAVIDSLCKKSRAPEAYELLNKAFSCGLEAD 485
Query: 271 VVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFK 330
V+Y +LI K ++ALA F M G + NIL+ AF + ++ +F+
Sbjct: 486 GVTYTILIQEQCKQSDIKQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKESERLFQ 545
Query: 331 CMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVN 390
+ P +YT+M+S Y D + A K+F +K+ G VP+ TYG+LI G K +
Sbjct: 546 LVVSLGLVPTKETYTSMISGYCKEGDFDLALKYFHNMKRHGCVPDSFTYGSLISGLCKKS 605
Query: 391 NLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVV 432
+++ ++Y+ M G+ P + T+ Y K D SA++
Sbjct: 606 MVDEACKLYEAMIDRGLSPPEVTRVTLAYEYCKRNDSASAMI 647
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 85/323 (26%), Positives = 149/323 (46%), Gaps = 9/323 (2%)
Query: 136 ALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDE 195
++ + GR A + MQ+ G PS++T +L++ +E+ AE VF DE
Sbjct: 175 CMLRNFSEIGRLNEAVGMVMDMQNQGLSPSSITMNCVLEIAIESGLIDYAENVF----DE 230
Query: 196 -EKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKE 254
+ PD F +M+ + G ++A + + M +RG T ++S
Sbjct: 231 MSVRGVCPDSSSFKLMVIGCFRDGKIQEADRWLSGMIQRGFIPDNATCTLILSALCENGL 290
Query: 255 VSKI---YDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNI 311
V++ + +M G +P+++++ LI+ K ++A + EEM+ G +P +
Sbjct: 291 VNRAIWYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTA 350
Query: 312 LLDAFAISGMVDQA-RTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQD 370
L+D G ++A R K +R D P++ +YT+M+ Y + AE F R+K+
Sbjct: 351 LIDGLCKRGWTEKAFRLFLKLVRSDIYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQ 410
Query: 371 GFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSA 430
G PNV TY TLI G+ K N ++ E+ + M G +PN + ++D+ K A
Sbjct: 411 GLFPNVNTYTTLINGHCKAGNFDRAYELMNLMDDEGFRPNIYTYNAVIDSLCKKSRAPEA 470
Query: 431 VVWYKEMESCGFPPDQKAKNILL 453
+ SCG D IL+
Sbjct: 471 YELLNKAFSCGLEADGVTYTILI 493
Score = 115 bits (287), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 84/361 (23%), Positives = 161/361 (44%), Gaps = 7/361 (1%)
Query: 98 DFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRM 157
F +++ + G +A++ LS M ++G+ P + T ++ A G A FR+M
Sbjct: 242 SFKLMVIGCFRDGKIQEADRWLSGMIQRGFIPDNATCTLILSALCENGLVNRAIWYFRKM 301
Query: 158 QSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKA 217
G +P+ + + ++ + K+A E+ ++ ++ KP+ +I K
Sbjct: 302 IDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMV---RNGWKPNVYTHTALIDGLCKR 358
Query: 218 GGYEKARKLFALMAERGVQQSTV-TYNSLM---SFETNYKEVSKIYDQMQRAGLQPDVVS 273
G EKA +LF + + + V TY S++ E ++ +M+ GL P+V +
Sbjct: 359 GWTEKAFRLFLKLVRSDIYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNT 418
Query: 274 YALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMR 333
Y LIN + KA + A + M D G RP YN ++D+ +A +
Sbjct: 419 YTTLINGHCKAGNFDRAYELMNLMDDEGFRPNIYTYNAVIDSLCKKSRAPEAYELLNKAF 478
Query: 334 RDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLE 393
D +YT ++ SD++ A FF R+ + GF ++ LI + + ++
Sbjct: 479 SCGLEADGVTYTILIQEQCKQSDIKQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMK 538
Query: 394 KMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILL 453
+ ++ + G+ P + +T+++ Y K DFD A+ ++ M+ G PD L+
Sbjct: 539 ESERLFQLVVSLGLVPTKETYTSMISGYCKEGDFDLALKYFHNMKRHGCVPDSFTYGSLI 598
Query: 454 S 454
S
Sbjct: 599 S 599
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/317 (21%), Positives = 140/317 (44%), Gaps = 10/317 (3%)
Query: 181 KFKEAEEVFMTLLDE--EKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQS 238
KF+ +++ D L+ ++ M+ + + G +A + M +G+ S
Sbjct: 145 KFRHFMRLYLVTADSLIANGNLQKAHEVMRCMLRNFSEIGRLNEAVGMVMDMQNQGLSPS 204
Query: 239 TVTYNSLMSFET-----NYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAV 293
++T N ++ +Y E ++D+M G+ PD S+ L++ + + +EA
Sbjct: 205 SITMNCVLEIAIESGLIDYAE--NVFDEMSVRGVCPDSSSFKLMVIGCFRDGKIQEADRW 262
Query: 294 FEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVN 353
M+ G P + ++L A +G+V++A F+ M P++ ++T+++
Sbjct: 263 LSGMIQRGFIPDNATCTLILSALCENGLVNRAIWYFRKMIDLGFKPNLINFTSLIDGLCK 322
Query: 354 ASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKM-RVNGIKPNQT 412
++ A + + ++G+ PNV T+ LI G K EK ++ K+ R + KPN
Sbjct: 323 KGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEKAFRLFLKLVRSDIYKPNVH 382
Query: 413 IFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNF 472
+T+++ Y K + A + + M+ G P+ L++ A + A EL+
Sbjct: 383 TYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGNFDRAYELMNLM 442
Query: 473 NHPNNEPGINGLSISVD 489
+ P I + +D
Sbjct: 443 DDEGFRPNIYTYNAVID 459
>gi|357120446|ref|XP_003561938.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g16880-like [Brachypodium distachyon]
Length = 787
Score = 142 bits (359), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 103/423 (24%), Positives = 195/423 (46%), Gaps = 18/423 (4%)
Query: 92 WDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKG-YAPSVVSHTALMEAYGRGGRYKNA 150
W +N +L + G ++A ++ M + G P VV++ L +A + +A
Sbjct: 310 WTYN-----VLAAGLCQAGKVDEAFRLKDEMERLGTLLPDVVTYNTLADACFKCRCSSDA 364
Query: 151 EAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMM 210
+ M+ G + + +T+ I++K + + + A + D+ L PD ++ +
Sbjct: 365 LRLLEEMREKGVKATLVTHNIVIKGLCKDGELEGALGCLNKMADDG---LAPDVITYNTL 421
Query: 211 IYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLM---SFETNYKEVSKIYDQMQRAGL 267
I+ + KAG KA L M RG++ T T N+++ E Y+E + + G
Sbjct: 422 IHAHCKAGNIAKAYTLMDEMVRRGLKLDTFTLNTVLYNLCKEKRYEEAQGLLQSPPQRGF 481
Query: 268 QPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQART 327
PD VSY ++ AY K E AL +++EM++ + P+ YN L+ + G + +A
Sbjct: 482 MPDEVSYGTVMAAYFKEYNSEPALRLWDEMIEKKLTPSISTYNTLIKGLSRMGRLKEAID 541
Query: 328 VFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYA 387
+ PD +Y ++ AY D+E A +F ++ ++ F P+V+T TL+ G
Sbjct: 542 KLNELMEKGLVPDDTTYNIIIHAYCKEGDLENAFQFHNKMVENSFKPDVVTCNTLMNGLC 601
Query: 388 KVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQK 447
L+K +++++ G K + + T++ K+ D D+A+ ++ +ME+ G PD
Sbjct: 602 LNGKLDKALKLFESWVEKGKKVDVITYNTLIQTMCKDGDVDTALHFFADMEARGLQPDAF 661
Query: 448 AKNILLSLAKTADERNEANELL------GNFNHPNNEPGINGLSISVDEEDDDDDDDEDD 501
N++LS A EA +L G + + P + S+ E D +E+
Sbjct: 662 TYNVVLSALSEAGRTEEAQNMLHKLAESGTLSQSFSSPLLKPSSVDEAESGKDAKTEEET 721
Query: 502 DDN 504
+N
Sbjct: 722 VEN 724
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 93/396 (23%), Positives = 172/396 (43%), Gaps = 36/396 (9%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N F +L+ + +G A LS M G +P V++ L+ A+ R G A A+
Sbjct: 203 NHYTFNLLVHTHCSKGTLADALSTLSTMQGFGLSPDAVTYNTLLNAHCRKGMLGEARALL 262
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSP--------------- 199
RM+ G P+ TY ++ + K+A +V + P
Sbjct: 263 ARMKKDGVAPTRPTYNTLVSAYARLGWIKQATKVVEAMTANGFEPDLWTYNVLAAGLCQA 322
Query: 200 ------------------LKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVT 241
L PD ++ + K A +L M E+GV+ + VT
Sbjct: 323 GKVDEAFRLKDEMERLGTLLPDVVTYNTLADACFKCRCSSDALRLLEEMREKGVKATLVT 382
Query: 242 YNSLMSFETNYKEVS---KIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEML 298
+N ++ E+ ++M GL PDV++Y LI+A+ KA +A + +EM+
Sbjct: 383 HNIVIKGLCKDGELEGALGCLNKMADDGLAPDVITYNTLIHAHCKAGNIAKAYTLMDEMV 442
Query: 299 DAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDME 358
G++ N +L ++A+ + + + PD SY T+++AY + E
Sbjct: 443 RRGLKLDTFTLNTVLYNLCKEKRYEEAQGLLQSPPQRGFMPDEVSYGTVMAAYFKEYNSE 502
Query: 359 GAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIM 418
A + + + + P++ TY TLIKG +++ L++ ++ +++ G+ P+ T + I+
Sbjct: 503 PALRLWDEMIEKKLTPSISTYNTLIKGLSRMGRLKEAIDKLNELMEKGLVPDDTTYNIII 562
Query: 419 DAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLS 454
AY K D ++A ++ +M F PD N L++
Sbjct: 563 HAYCKEGDLENAFQFHNKMVENSFKPDVVTCNTLMN 598
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 85/364 (23%), Positives = 154/364 (42%), Gaps = 42/364 (11%)
Query: 129 PSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEV 188
P+ + L+ + G +A + MQ G P A+TY +L EA +
Sbjct: 202 PNHYTFNLLVHTHCSKGTLADALSTLSTMQGFGLSPDAVTYNTLLNAHCRKGMLGEARAL 261
Query: 189 FMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSL--- 245
+ + +P +P ++ ++ Y + G ++A K+ M G + TYN L
Sbjct: 262 LARMKKDGVAPTRPT---YNTLVSAYARLGWIKQATKVVEAMTANGFEPDLWTYNVLAAG 318
Query: 246 MSFETNYKEVSKIYDQMQRAG-LQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRP 304
+ E ++ D+M+R G L PDVV+Y L +A K R +AL + EEM + GV+
Sbjct: 319 LCQAGKVDEAFRLKDEMERLGTLLPDVVTYNTLADACFKCRCSSDALRLLEEMREKGVKA 378
Query: 305 THKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDM------- 357
T +NI++ G ++ A M D +PD+ +Y T++ A+ A ++
Sbjct: 379 TLVTHNIVIKGLCKDGELEGALGCLNKMADDGLAPDVITYNTLIHAHCKAGNIAKAYTLM 438
Query: 358 ----------------------------EGAEKFFRRLKQDGFVPNVITYGTLIKGYAKV 389
E A+ + Q GF+P+ ++YGT++ Y K
Sbjct: 439 DEMVRRGLKLDTFTLNTVLYNLCKEKRYEEAQGLLQSPPQRGFMPDEVSYGTVMAAYFKE 498
Query: 390 NNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAK 449
N E + ++D+M + P+ + + T++ + A+ E+ G PD
Sbjct: 499 YNSEPALRLWDEMIEKKLTPSISTYNTLIKGLSRMGRLKEAIDKLNELMEKGLVPDDTTY 558
Query: 450 NILL 453
NI++
Sbjct: 559 NIII 562
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/290 (23%), Positives = 116/290 (40%), Gaps = 47/290 (16%)
Query: 200 LKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETN---YKEVS 256
L P+ F+++++ + G A + M G+ VTYN+L++ E
Sbjct: 200 LHPNHYTFNLLVHTHCSKGTLADALSTLSTMQGFGLSPDAVTYNTLLNAHCRKGMLGEAR 259
Query: 257 KIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAF 316
+ +M++ G+ P +Y L++AY + ++A V E M G P YN+L
Sbjct: 260 ALLARMKKDGVAPTRPTYNTLVSAYARLGWIKQATKVVEAMTANGFEPDLWTYNVLAAGL 319
Query: 317 AISGMVDQ------------------------ARTVFKCMRRDRCSPD------------ 340
+G VD+ A FKC RCS D
Sbjct: 320 CQAGKVDEAFRLKDEMERLGTLLPDVVTYNTLADACFKC----RCSSDALRLLEEMREKG 375
Query: 341 ----ICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMM 396
+ ++ ++ ++EGA ++ DG P+VITY TLI + K N+ K
Sbjct: 376 VKATLVTHNIVIKGLCKDGELEGALGCLNKMADDGLAPDVITYNTLIHAHCKAGNIAKAY 435
Query: 397 EIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQ 446
+ D+M G+K + T++ K K ++ A + GF PD+
Sbjct: 436 TLMDEMVRRGLKLDTFTLNTVLYNLCKEKRYEEAQGLLQSPPQRGFMPDE 485
Score = 78.6 bits (192), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 80/398 (20%), Positives = 149/398 (37%), Gaps = 76/398 (19%)
Query: 101 MLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSS 160
++I K G+ A L+ M G AP V+++ L+ A+ + G A + M
Sbjct: 385 IVIKGLCKDGELEGALGCLNKMADDGLAPDVITYNTLIHAHCKAGNIAKAYTLMDEMVRR 444
Query: 161 GPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGY 220
G + T +L + +++EA+ + + + PD+ + ++ Y K
Sbjct: 445 GLKLDTFTLNTVLYNLCKEKRYEEAQGLLQS---PPQRGFMPDEVSYGTVMAAYFKEYNS 501
Query: 221 EKARKLFALMAERGVQQSTVTYNSL---MSFETNYKEVSKIYDQMQRAGLQPDVVSYALL 277
E A +L+ M E+ + S TYN+L +S KE +++ GL PD +Y ++
Sbjct: 502 EPALRLWDEMIEKKLTPSISTYNTLIKGLSRMGRLKEAIDKLNELMEKGLVPDDTTYNII 561
Query: 278 INAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFK------- 330
I+AY K E A +M++ +P N L++ ++G +D+A +F+
Sbjct: 562 IHAYCKEGDLENAFQFHNKMVENSFKPDVVTCNTLMNGLCLNGKLDKALKLFESWVEKGK 621
Query: 331 --------------C--------------MRRDRCSPDICSYTTMLSAYVNASDMEGAEK 362
C M PD +Y +LSA A E A+
Sbjct: 622 KVDVITYNTLIQTMCKDGDVDTALHFFADMEARGLQPDAFTYNVVLSALSEAGRTEEAQN 681
Query: 363 FFRRLKQDGFV----------PNVI-------------------------TYGTLIKGYA 387
+L + G + P+ + Y L+ G
Sbjct: 682 MLHKLAESGTLSQSFSSPLLKPSSVDEAESGKDAKTEEETVENPQDSASEAYTKLVNGLC 741
Query: 388 KVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNK 425
++ I D+M G+ + + + T+M+ K +
Sbjct: 742 TSGQFKEAKAILDEMMQKGMSVDSSTYITLMEGLVKRQ 779
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 45/198 (22%), Positives = 89/198 (44%), Gaps = 3/198 (1%)
Query: 258 IYDQMQRAGLQPDVVSYALLINAYGKA--RREEEALAVFEEMLDAGVRPTHKAYNILLDA 315
++ +R ++P + + +++A ++ + +L F ++ + P H +N+L+
Sbjct: 154 LHSLRRRVRVRPSLQAANAVLSALARSPSTSPQASLDAFRSIVALRLHPNHYTFNLLVHT 213
Query: 316 FAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPN 375
G + A + M+ SPD +Y T+L+A+ + A R+K+DG P
Sbjct: 214 HCSKGTLADALSTLSTMQGFGLSPDAVTYNTLLNAHCRKGMLGEARALLARMKKDGVAPT 273
Query: 376 VITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYK 435
TY TL+ YA++ +++ ++ + M NG +P+ + + + D A
Sbjct: 274 RPTYNTLVSAYARLGWIKQATKVVEAMTANGFEPDLWTYNVLAAGLCQAGKVDEAFRLKD 333
Query: 436 EMESCG-FPPDQKAKNIL 452
EME G PD N L
Sbjct: 334 EMERLGTLLPDVVTYNTL 351
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/296 (21%), Positives = 125/296 (42%), Gaps = 41/296 (13%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
+E+ + ++ AY K+ + A ++ M +K PS+ ++ L++ R GR K A
Sbjct: 484 DEVSYGTVMAAYFKEYNSEPALRLWDEMIEKKLTPSISTYNTLIKGLSRMGRLKEAIDKL 543
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
+ G P TY II+ + + + A + +++ KPD + ++
Sbjct: 544 NELMEKGLVPDDTTYNIIIHAYCKEGDLENAFQFHNKMVENS---FKPDVVTCNTLMNGL 600
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSL---MSFETNYKEVSKIYDQMQRAGLQPDV 271
G +KA KLF E+G + +TYN+L M + + + M+ GLQPD
Sbjct: 601 CLNGKLDKALKLFESWVEKGKKVDVITYNTLIQTMCKDGDVDTALHFFADMEARGLQPDA 660
Query: 272 VSYALLINAYGKARREEEALAVFEEMLDAG----------VRPTH--------------- 306
+Y ++++A +A R EEA + ++ ++G ++P+
Sbjct: 661 FTYNVVLSALSEAGRTEEAQNMLHKLAESGTLSQSFSSPLLKPSSVDEAESGKDAKTEEE 720
Query: 307 ----------KAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYV 352
+AY L++ SG +A+ + M + S D +Y T++ V
Sbjct: 721 TVENPQDSASEAYTKLVNGLCTSGQFKEAKAILDEMMQKGMSVDSSTYITLMEGLV 776
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/194 (21%), Positives = 86/194 (44%), Gaps = 3/194 (1%)
Query: 278 INAYGKARREEEALAVFEEMLD-AGVRPTHKAYNILLDAFAISGMVDQARTV--FKCMRR 334
++AY + R A + + VRP+ +A N +L A A S ++ F+ +
Sbjct: 138 LSAYSRLRLPHLAAQLLHSLRRRVRVRPSLQAANAVLSALARSPSTSPQASLDAFRSIVA 197
Query: 335 DRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEK 394
R P+ ++ ++ + + + A ++ G P+ +TY TL+ + + L +
Sbjct: 198 LRLHPNHYTFNLLVHTHCSKGTLADALSTLSTMQGFGLSPDAVTYNTLLNAHCRKGMLGE 257
Query: 395 MMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLS 454
+ +M+ +G+ P + + T++ AY + A + M + GF PD N+L +
Sbjct: 258 ARALLARMKKDGVAPTRPTYNTLVSAYARLGWIKQATKVVEAMTANGFEPDLWTYNVLAA 317
Query: 455 LAKTADERNEANEL 468
A + +EA L
Sbjct: 318 GLCQAGKVDEAFRL 331
Score = 47.8 bits (112), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 47/224 (20%), Positives = 85/224 (37%), Gaps = 41/224 (18%)
Query: 101 MLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSS 160
++I AY K+GD A + + M + + P VV+ LM G+ A +F
Sbjct: 560 IIIHAYCKEGDLENAFQFHNKMVENSFKPDVVTCNTLMNGLCLNGKLDKALKLFESWVEK 619
Query: 161 GPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGY 220
G + +TY +++ + A F D E L+PD +++++ +AG
Sbjct: 620 GKKVDVITYNTLIQTMCKDGDVDTALHFFA---DMEARGLQPDAFTYNVVLSALSEAGRT 676
Query: 221 EKARKLFALMAERGV--------------------------QQSTV---------TYNSL 245
E+A+ + +AE G ++ TV Y L
Sbjct: 677 EEAQNMLHKLAESGTLSQSFSSPLLKPSSVDEAESGKDAKTEEETVENPQDSASEAYTKL 736
Query: 246 ---MSFETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARR 286
+ +KE I D+M + G+ D +Y L+ K ++
Sbjct: 737 VNGLCTSGQFKEAKAILDEMMQKGMSVDSSTYITLMEGLVKRQK 780
>gi|9758456|dbj|BAB08985.1| membrane-associated salt-inducible protein-like [Arabidopsis
thaliana]
Length = 949
Score = 142 bits (359), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 96/374 (25%), Positives = 173/374 (46%), Gaps = 38/374 (10%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
LI Y K G +KA +V M ++G ++ +++ ++ + + + NA A+F M G
Sbjct: 490 LINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMVKEG 549
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
+P + Y I+ F A T+ + +K +P + F +I+ Y K+G
Sbjct: 550 MKPDVILYNNIISAFCGMGNMDRA---IQTVKEMQKLRHRPTTRTFMPIIHGYAKSGDMR 606
Query: 222 KARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSKIYDQM------------------- 262
++ ++F +M G + T+N L++ ++ +I D+M
Sbjct: 607 RSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQAVEILDEMTLAGVSANEHTYTKIMQGY 666
Query: 263 ----------------QRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTH 306
Q GL D+ +Y L+ A K+ R + ALAV +EM +
Sbjct: 667 ASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSALAVTKEMSARNIPRNS 726
Query: 307 KAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRR 366
YNIL+D +A G V +A + + M+++ PDI +YT+ +SA A DM A +
Sbjct: 727 FVYNILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTSFISACSKAGDMNRATQTIEE 786
Query: 367 LKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKD 426
++ G PN+ TY TLIKG+A+ + EK + Y++M+ GIKP++ ++ ++ +
Sbjct: 787 MEALGVKPNIKTYTTLIKGWARASLPEKALSCYEEMKAMGIKPDKAVYHCLLTSLLSRAS 846
Query: 427 FDSAVVWYKEMESC 440
A ++ M C
Sbjct: 847 IAEAYIYSGVMTIC 860
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 95/383 (24%), Positives = 178/383 (46%), Gaps = 38/383 (9%)
Query: 98 DFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRM 157
+F +++ YG++GD ++A + M +G P+ +T+L+ AY G A + R+M
Sbjct: 311 EFGLMVKFYGRRGDMHRARETFERMRARGITPTSRIYTSLIHAYAVGRDMDEALSCVRKM 370
Query: 158 QSSGPRPSALTYQIILKLFVEANK-------FKEAEEVFMTL------------------ 192
+ G S +TY +I+ F +A F EA+ + TL
Sbjct: 371 KEEGIEMSLVTYSVIVGGFSKAGHAEAADYWFDEAKRIHKTLNASIYGKIIYAHCQTCNM 430
Query: 193 -------LDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSL 245
+ E+ + ++H M+ Y +K +F + E G + VTY L
Sbjct: 431 ERAEALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVFKRLKECGFTPTVVTYGCL 490
Query: 246 MSFETNYKEVSK---IYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGV 302
++ T ++SK + M+ G++ ++ +Y+++IN + K + A AVFE+M+ G+
Sbjct: 491 INLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMVKEGM 550
Query: 303 RPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEK 362
+P YN ++ AF G +D+A K M++ R P ++ ++ Y + DM + +
Sbjct: 551 KPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGDMRRSLE 610
Query: 363 FFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYG 422
F +++ G VP V T+ LI G + + +EI D+M + G+ N+ +T IM Y
Sbjct: 611 VFDMMRRCGCVPTVHTFNGLINGLVEKR---QAVEILDEMTLAGVSANEHTYTKIMQGYA 667
Query: 423 KNKDFDSAVVWYKEMESCGFPPD 445
D A ++ +++ G D
Sbjct: 668 SVGDTGKAFEYFTRLQNEGLDVD 690
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 51/218 (23%), Positives = 101/218 (46%), Gaps = 4/218 (1%)
Query: 251 NYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYN 310
N++ V ++++ + P + L++ YG+ A FE M G+ PT + Y
Sbjct: 293 NWQAVISAFEKISK----PSRTEFGLMVKFYGRRGDMHRARETFERMRARGITPTSRIYT 348
Query: 311 ILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQD 370
L+ A+A+ +D+A + + M+ + + +Y+ ++ + A E A+ +F K+
Sbjct: 349 SLIHAYAVGRDMDEALSCVRKMKEEGIEMSLVTYSVIVGGFSKAGHAEAADYWFDEAKRI 408
Query: 371 GFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSA 430
N YG +I + + N+E+ + +M GI I+ T+MD Y D
Sbjct: 409 HKTLNASIYGKIIYAHCQTCNMERAEALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKG 468
Query: 431 VVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANEL 468
+V +K ++ CGF P L++L + ++A E+
Sbjct: 469 LVVFKRLKECGFTPTVVTYGCLINLYTKVGKISKALEV 506
>gi|451798817|gb|AGF69112.1| PPR [Raphanus sativus]
Length = 479
Score = 142 bits (359), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 91/323 (28%), Positives = 155/323 (47%), Gaps = 16/323 (4%)
Query: 129 PSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEV 188
P+VV+ T LM R GR A A+ RM G +P+ +TY I+ + A +
Sbjct: 79 PNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKMGDTVSALNL 138
Query: 189 FMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMS- 247
+ EE S +KPD ++ +I K G + A+ LF M ++G+ VTY+ +++
Sbjct: 139 LRKM--EELSHIKPDVVIYSAIIDGLWKDGRHTDAQNLFIEMQDKGIFPDIVTYSCMING 196
Query: 248 FETN--YKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPT 305
F ++ + E ++ +M + PDVV+++ LINA K A + +EM+ +GV P
Sbjct: 197 FCSSGKWSEAQRLLQEMLVRKISPDVVTFSGLINALVKEGDLNSAQDLLQEMISSGVCPN 256
Query: 306 HKAYNILLDAFAISGMVDQARTVFKCMRR-----------DRCSPDICSYTTMLSAYVNA 354
N LLD SG + A +FK M++ + PD+ +Y ++S +N
Sbjct: 257 VVTCNTLLDGLCDSGKLKDALEMFKAMQKSMMDIDATHAFNGVEPDVQTYNILISGLINE 316
Query: 355 SDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIF 414
AE+ + + G VP+ +TY ++I G K + L++ +++D M PN F
Sbjct: 317 GKFLEAEELYEEMPHRGIVPDTVTYSSMINGLCKQSRLDEATQMFDSMGSKSFSPNIVTF 376
Query: 415 TTIMDAYGKNKDFDSAVVWYKEM 437
T++ Y K D + + EM
Sbjct: 377 NTLITGYCKAGMVDDGLELFCEM 399
Score = 142 bits (357), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 90/359 (25%), Positives = 174/359 (48%), Gaps = 18/359 (5%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYA-PSVVSHTALMEAYGRGGRYKNAEAI 153
N++ + ++ K GD A +L M + + P VV ++A+++ + GR+ +A+ +
Sbjct: 115 NQITYGTIVDGMCKMGDTVSALNLLRKMEELSHIKPDVVIYSAIIDGLWKDGRHTDAQNL 174
Query: 154 FRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYM 213
F MQ G P +TY ++ F + K+ EA+ + +L + SP D F +I
Sbjct: 175 FIEMQDKGIFPDIVTYSCMINGFCSSGKWSEAQRLLQEMLVRKISP---DVVTFSGLINA 231
Query: 214 YKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETN---YKEVSKIYDQMQRA----- 265
K G A+ L M GV + VT N+L+ + K+ +++ MQ++
Sbjct: 232 LVKEGDLNSAQDLLQEMISSGVCPNVVTCNTLLDGLCDSGKLKDALEMFKAMQKSMMDID 291
Query: 266 ------GLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAIS 319
G++PDV +Y +LI+ + EA ++EEM G+ P Y+ +++
Sbjct: 292 ATHAFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTVTYSSMINGLCKQ 351
Query: 320 GMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITY 379
+D+A +F M SP+I ++ T+++ Y A ++ + F + + G V N ITY
Sbjct: 352 SRLDEATQMFDSMGSKSFSPNIVTFNTLITGYCKAGMVDDGLELFCEMGRRGIVANAITY 411
Query: 380 GTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEME 438
TLI+G+ KV N+ ++I+ +M +G+ P+ ++ ++ A+ +E++
Sbjct: 412 ITLIRGFRKVGNINGSLDIFQEMISSGVYPDTITIRNMLTGLWSKEELKKALAMLEELQ 470
Score = 115 bits (289), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 77/366 (21%), Positives = 162/366 (44%), Gaps = 22/366 (6%)
Query: 131 VVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFM 190
+ S L++ + + A + F ++ G P+ +T+ +L ++ EA ++F
Sbjct: 15 IYSFNILIKCFCSCSKLPFALSTFGKLTKLGFHPTLVTFNTLLHGLCVEDRVSEALDLFH 74
Query: 191 TLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFET 250
+ KP+ F ++ + G +A L M E G+Q + +TY +++
Sbjct: 75 QMC-------KPNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMC 127
Query: 251 NYKEVSKIYDQMQR----AGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTH 306
+ + +++ + ++PDVV Y+ +I+ K R +A +F EM D G+ P
Sbjct: 128 KMGDTVSALNLLRKMEELSHIKPDVVIYSAIIDGLWKDGRHTDAQNLFIEMQDKGIFPDI 187
Query: 307 KAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRR 366
Y+ +++ F SG +A+ + + M + SPD+ +++ +++A V D+ A+ +
Sbjct: 188 VTYSCMINGFCSSGKWSEAQRLLQEMLVRKISPDVVTFSGLINALVKEGDLNSAQDLLQE 247
Query: 367 LKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMR-----------VNGIKPNQTIFT 415
+ G PNV+T TL+ G L+ +E++ M+ NG++P+ +
Sbjct: 248 MISSGVCPNVVTCNTLLDGLCDSGKLKDALEMFKAMQKSMMDIDATHAFNGVEPDVQTYN 307
Query: 416 TIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHP 475
++ F A Y+EM G PD + +++ +EA ++ +
Sbjct: 308 ILISGLINEGKFLEAEELYEEMPHRGIVPDTVTYSSMINGLCKQSRLDEATQMFDSMGSK 367
Query: 476 NNEPGI 481
+ P I
Sbjct: 368 SFSPNI 373
Score = 91.7 bits (226), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 102/209 (48%), Gaps = 7/209 (3%)
Query: 264 RAGLQ--PDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGM 321
+ GLQ D+ S+ +LI + + AL+ F ++ G PT +N LL +
Sbjct: 6 KHGLQIPCDIYSFNILIKCFCSCSKLPFALSTFGKLTKLGFHPTLVTFNTLLHGLCVEDR 65
Query: 322 VDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGT 381
V +A +F M C P++ ++TT+++ + A R+ +DG PN ITYGT
Sbjct: 66 VSEALDLFHQM----CKPNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGT 121
Query: 382 LIKGYAKVNNLEKMMEIYDKM-RVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESC 440
++ G K+ + + + KM ++ IKP+ I++ I+D K+ A + EM+
Sbjct: 122 IVDGMCKMGDTVSALNLLRKMEELSHIKPDVVIYSAIIDGLWKDGRHTDAQNLFIEMQDK 181
Query: 441 GFPPDQKAKNILLSLAKTADERNEANELL 469
G PD + +++ ++ + +EA LL
Sbjct: 182 GIFPDIVTYSCMINGFCSSGKWSEAQRLL 210
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 57/274 (20%), Positives = 100/274 (36%), Gaps = 79/274 (28%)
Query: 75 KWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSH 134
KW+ +L+ + ++ + + F LI A K+GD N A+ +L M G P+VV+
Sbjct: 202 KWSEAQRLLQEMLVRKISP-DVVTFSGLINALVKEGDLNSAQDLLQEMISSGVCPNVVTC 260
Query: 135 TALMEAYGRGGRYKNAEAIFRRMQSS-----------GPRPSALTYQIILKLFVEANKFK 183
L++ G+ K+A +F+ MQ S G P TY I++ + KF
Sbjct: 261 NTLLDGLCDSGKLKDALEMFKAMQKSMMDIDATHAFNGVEPDVQTYNILISGLINEGKFL 320
Query: 184 EAEEVF------------------------MTLLDEEKS--------PLKPDQKMFHMMI 211
EAEE++ + LDE P+ F+ +I
Sbjct: 321 EAEELYEEMPHRGIVPDTVTYSSMINGLCKQSRLDEATQMFDSMGSKSFSPNIVTFNTLI 380
Query: 212 YMYKKAGGYEKARKLFALMAERGVQQS--------------------------------- 238
Y KAG + +LF M RG+ +
Sbjct: 381 TGYCKAGMVDDGLELFCEMGRRGIVANAITYITLIRGFRKVGNINGSLDIFQEMISSGVY 440
Query: 239 --TVTYNSLMSFETNYKEVSKIYDQMQRAGLQPD 270
T+T ++++ + +E+ K ++ + D
Sbjct: 441 PDTITIRNMLTGLWSKEELKKALAMLEELQMSMD 474
>gi|357117807|ref|XP_003560653.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g02150-like [Brachypodium distachyon]
Length = 692
Score = 142 bits (359), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 92/321 (28%), Positives = 157/321 (48%), Gaps = 6/321 (1%)
Query: 128 APSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEE 187
AP+V + +++ + G A A+ RM++ G P +TY ++ + K E EE
Sbjct: 191 APNVFTFNIMIDFLCKEGDLAEARALLARMKAIGCSPDVVTYNSLIDGY---GKCGELEE 247
Query: 188 VFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLM- 246
V + + +PD ++ ++ + K G E+A FA M GV + VT+++ +
Sbjct: 248 VEKLVGEMRGCGCRPDVVTYNALVNCFCKFGRMERAYSYFAEMKREGVMANVVTFSTFVD 307
Query: 247 SFETN--YKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRP 304
+F N +E K++ QM+ G++P+ V+Y L++ KA R ++AL + EM+ GV
Sbjct: 308 AFCKNGMVREAMKLFAQMRMKGMKPNEVTYTCLVDGTCKAGRLDDALVLTNEMVQQGVPL 367
Query: 305 THKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFF 364
Y +L+D G V +A VF+ M R + YTT++ + + E A
Sbjct: 368 NVVTYTVLVDGLCKEGKVAEAEDVFRLMERAGIRANELLYTTLIHGHFVYKNSERALSLL 427
Query: 365 RRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKN 424
+K G +V YG LI G + L++ + +KM G+KPN I+T IMDA K
Sbjct: 428 SEMKDKGMELDVSLYGALIWGLCNLQKLDEAKSLLNKMDECGLKPNNVIYTNIMDACFKA 487
Query: 425 KDFDSAVVWYKEMESCGFPPD 445
+ A+ ++M GF P+
Sbjct: 488 RKESEAIALLQKMMDSGFRPN 508
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 91/341 (26%), Positives = 165/341 (48%), Gaps = 10/341 (2%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
LI YGK G+ + EK++ M G P VV++ AL+ + + GR + A + F M+ G
Sbjct: 235 LIDGYGKCGELEEVEKLVGEMRGCGCRPDVVTYNALVNCFCKFGRMERAYSYFAEMKREG 294
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
+ +T+ + F + +EA ++F + +KP++ + ++ KAG +
Sbjct: 295 VMANVVTFSTFVDAFCKNGMVREAMKLFAQM---RMKGMKPNEVTYTCLVDGTCKAGRLD 351
Query: 222 KARKLFALMAERGVQQSTVTYNSL---MSFETNYKEVSKIYDQMQRAGLQPDVVSYALLI 278
A L M ++GV + VTY L + E E ++ M+RAG++ + + Y LI
Sbjct: 352 DALVLTNEMVQQGVPLNVVTYTVLVDGLCKEGKVAEAEDVFRLMERAGIRANELLYTTLI 411
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCS 338
+ + + E AL++ EM D G+ Y L+ +D+A+++ + D C
Sbjct: 412 HGHFVYKNSERALSLLSEMKDKGMELDVSLYGALIWGLCNLQKLDEAKSLLN--KMDECG 469
Query: 339 --PDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMM 396
P+ YT ++ A A A +++ GF PN++TY L+ G K ++++ +
Sbjct: 470 LKPNNVIYTNIMDACFKARKESEAIALLQKMMDSGFRPNIVTYCALVDGLCKAGSIDEAI 529
Query: 397 EIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEM 437
++KM G++PN +T ++D KN D AV+ EM
Sbjct: 530 SHFNKMVDLGLEPNVQAYTALVDGLCKNGRLDKAVLLLDEM 570
Score = 125 bits (314), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 82/349 (23%), Positives = 173/349 (49%), Gaps = 8/349 (2%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
NE+ + L+ K G + A + + M ++G +VV++T L++ + G+ AE +F
Sbjct: 333 NEVTYTCLVDGTCKAGRLDDALVLTNEMVQQGVPLNVVTYTVLVDGLCKEGKVAEAEDVF 392
Query: 155 RRMQSSGPRPSALTYQIILK-LFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYM 213
R M+ +G R + L Y ++ FV +K +E L + + ++ D ++ +I+
Sbjct: 393 RLMERAGIRANELLYTTLIHGHFV----YKNSERALSLLSEMKDKGMELDVSLYGALIWG 448
Query: 214 YKKAGGYEKARKLFALMAERGVQQSTVTYNSLM--SFETNYK-EVSKIYDQMQRAGLQPD 270
++A+ L M E G++ + V Y ++M F+ + E + +M +G +P+
Sbjct: 449 LCNLQKLDEAKSLLNKMDECGLKPNNVIYTNIMDACFKARKESEAIALLQKMMDSGFRPN 508
Query: 271 VVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFK 330
+V+Y L++ KA +EA++ F +M+D G+ P +AY L+D +G +D+A +
Sbjct: 509 IVTYCALVDGLCKAGSIDEAISHFNKMVDLGLEPNVQAYTALVDGLCKNGRLDKAVLLLD 568
Query: 331 CMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVN 390
M S D T+++ ++ +++ A ++ G ++ Y + G+ +N
Sbjct: 569 EMIDKGMSLDNVVCTSLMDGHLKQGNLQDAFALKAKMINSGLQLDLYGYTCFVWGFCNLN 628
Query: 391 NLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMES 439
+++ E+ +M NGI P+ ++ +++ K + + A + EMES
Sbjct: 629 MIQEAREVLSEMIENGITPDAVVYNCLINKCQKLGNMEEAAILQNEMES 677
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 83/354 (23%), Positives = 162/354 (45%), Gaps = 41/354 (11%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + F + A+ K G +A K+ + M KG P+ V++T L++ + GR +A +
Sbjct: 298 NVVTFSTFVDAFCKNGMVREAMKLFAQMRMKGMKPNEVTYTCLVDGTCKAGRLDDALVLT 357
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
M G + +TY +++ + K EAE+VF + E++ ++ ++ ++ +I+ +
Sbjct: 358 NEMVQQGVPLNVVTYTVLVDGLCKEGKVAEAEDVFRLM---ERAGIRANELLYTTLIHGH 414
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYK---EVSKIYDQMQRAGLQPDV 271
E+A L + M ++G++ Y +L+ N + E + ++M GL+P+
Sbjct: 415 FVYKNSERALSLLSEMKDKGMELDVSLYGALIWGLCNLQKLDEAKSLLNKMDECGLKPNN 474
Query: 272 VSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKC 331
V Y +++A KAR+E EA+A+ ++M+D+G RP
Sbjct: 475 VIYTNIMDACFKARKESEAIALLQKMMDSGFRP--------------------------- 507
Query: 332 MRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNN 391
+I +Y ++ A ++ A F ++ G PNV Y L+ G K
Sbjct: 508 --------NIVTYCALVDGLCKAGSIDEAISHFNKMVDLGLEPNVQAYTALVDGLCKNGR 559
Query: 392 LEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPD 445
L+K + + D+M G+ + + T++MD + K + A +M + G D
Sbjct: 560 LDKAVLLLDEMIDKGMSLDNVVCTSLMDGHLKQGNLQDAFALKAKMINSGLQLD 613
>gi|125548803|gb|EAY94625.1| hypothetical protein OsI_16402 [Oryza sativa Indica Group]
Length = 769
Score = 142 bits (359), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 85/335 (25%), Positives = 161/335 (48%), Gaps = 24/335 (7%)
Query: 110 GDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTY 169
G F+KA +++ M +KG+ P +++ ++ + + A +F+ M+ G P TY
Sbjct: 436 GKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTY 495
Query: 170 QIILKLFVEANKFKEAEEVFMTLLDEEKSP-LKPDQKMFHMMIYMYKKAGGYEKARKLFA 228
I++ F +A ++A+ +F +E +S P + +I+ Y KA +A +F
Sbjct: 496 TILIDSFCKAGLIEQAQWLF----EEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFH 551
Query: 229 LMAERGVQQSTVTYNSLMSFETNYKEVSK---IYDQM----------------QRAGLQP 269
M + G + + VTY +L+ +SK +Y ++ R L P
Sbjct: 552 RMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAP 611
Query: 270 DVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVF 329
+VV+Y L++ KA + + A + + ML +G P H Y+ L+D F +G +D A+ VF
Sbjct: 612 NVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVF 671
Query: 330 KCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKV 389
M + P + +YT+++ ++ A K ++ +D PNV+TY +I G ++
Sbjct: 672 LQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRI 731
Query: 390 NNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKN 424
EK +++ M G PN +T ++D G++
Sbjct: 732 GESEKALKLLSLMEEKGCSPNVVTYTALIDGLGQS 766
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 99/445 (22%), Positives = 176/445 (39%), Gaps = 66/445 (14%)
Query: 105 AYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRP 164
A K+G + A L + ++ + V T ++ + A + RM+ + P
Sbjct: 253 ALCKEGRWADA---LDMIEREDFKLDTVLCTHMISGLMEASYFDEAMSFLHRMRCNSCIP 309
Query: 165 SALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKAR 224
+ +TY+ +L F++ + + + ++ E P+ +F+ +++ Y Y A
Sbjct: 310 NVVTYRTLLSGFLKKKQLGWCKRIINMMMTEG---CNPNPSLFNSLVHSYCNEKDYAYAY 366
Query: 225 KLFALMAERGVQQSTVTYNSLMSFETNYKEVS---------KIY---------------- 259
KL M G V YN + +++ KIY
Sbjct: 367 KLLNRMTTCGCPPGYVVYNIFIGSICGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVA 426
Query: 260 -------------------DQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDA 300
+M R G PD +Y+ +I A + E+A +F+EM
Sbjct: 427 NFARCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMV 486
Query: 301 GVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGA 360
GV P Y IL+D+F +G+++QA+ +F+ MR CSP + +YT ++ AY+ A + A
Sbjct: 487 GVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQA 546
Query: 361 EKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKM----------------RV 404
F R+ G PN +TYG L+ G K N+ K E+Y K+
Sbjct: 547 NDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDR 606
Query: 405 NGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNE 464
+ + PN + ++D K D A M S G P+ + L+ A + +
Sbjct: 607 HTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDS 666
Query: 465 ANELLGNFNHPNNEPGINGLSISVD 489
A E+ P ++ + +D
Sbjct: 667 AQEVFLQMTKCGYLPSVHTYTSLID 691
Score = 115 bits (289), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 98/452 (21%), Positives = 178/452 (39%), Gaps = 57/452 (12%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + + L++ + K+ +++++ M +G P+ +L+ +Y Y A +
Sbjct: 310 NVVTYRTLLSGFLKKKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLL 369
Query: 155 RRMQSSGPRPSALTYQIIL-------------------KLFVEA-------NKFKEA--- 185
RM + G P + Y I + K++ E NK A
Sbjct: 370 NRMTTCGCPPGYVVYNIFIGSICGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFA 429
Query: 186 ---------EEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQ 236
++ F + + + PD + +I A EKA LF M GV
Sbjct: 430 RCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVT 489
Query: 237 QSTVTYNSLM-SFETN--YKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAV 293
TY L+ SF ++ ++++M+ G P VV+Y LI+AY KA++ +A +
Sbjct: 490 PDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDI 549
Query: 294 FEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTV----------------FKCMRRDRC 337
F M+DAG RP Y L+D +G + +A V F C R
Sbjct: 550 FHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTL 609
Query: 338 SPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMME 397
+P++ +Y ++ A ++ A + + G PN I Y LI G+ K ++ E
Sbjct: 610 APNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQE 669
Query: 398 IYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAK 457
++ +M G P+ +T+++D K+ D A+ +M P+ ++
Sbjct: 670 VFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLC 729
Query: 458 TADERNEANELLGNFNHPNNEPGINGLSISVD 489
E +A +LL P + + +D
Sbjct: 730 RIGESEKALKLLSLMEEKGCSPNVVTYTALID 761
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 78/390 (20%), Positives = 155/390 (39%), Gaps = 19/390 (4%)
Query: 101 MLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSS 160
+L+ + G +N+A + L + GY PS V++ AL++ G+ + + M S
Sbjct: 179 VLVRRCCRGGMWNEALEELGRLKDFGYRPSKVTYNALVQVLSSAGQVDLGFRVQKEMSES 238
Query: 161 GPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGY 220
G T + ++ +A ++ E+ K D + MI +A +
Sbjct: 239 GFCMDRFTVGCFAHALCKEGRWADALDMI------EREDFKLDTVLCTHMISGLMEASYF 292
Query: 221 EKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVS---KIYDQMQRAGLQPDVVSYALL 277
++A M + VTY +L+S K++ +I + M G P+ + L
Sbjct: 293 DEAMSFLHRMRCNSCIPNVVTYRTLLSGFLKKKQLGWCKRIINMMMTEGCNPNPSLFNSL 352
Query: 278 INAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISG--------MVDQARTVF 329
+++Y + A + M G P + YNI + +I G ++D A ++
Sbjct: 353 VHSYCNEKDYAYAYKLLNRMTTCGCPPGYVVYNIFIG--SICGQEKLPSPDLLDLAEKIY 410
Query: 330 KCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKV 389
M C + + + A + + + + GFVP+ TY +I
Sbjct: 411 GEMLAANCVLNKVNVANFARCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHA 470
Query: 390 NNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAK 449
+EK ++ +M++ G+ P+ +T ++D++ K + A ++EM S G P
Sbjct: 471 TKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTY 530
Query: 450 NILLSLAKTADERNEANELLGNFNHPNNEP 479
L+ A + +AN++ P
Sbjct: 531 TALIHAYLKAKQVPQANDIFHRMVDAGCRP 560
Score = 65.5 bits (158), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 59/277 (21%), Positives = 115/277 (41%), Gaps = 50/277 (18%)
Query: 183 KEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTY 242
++AE + + +E++ L ++ ++++ + G + +A + + + G + S VTY
Sbjct: 156 RDAERLLREIGEEDREVLG---RLLNVLVRRCCRGGMWNEALEELGRLKDFGYRPSKVTY 212
Query: 243 NSLMSFETNYKEVS---KIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEE--- 296
N+L+ ++ +V ++ +M +G D + +A K R +AL + E
Sbjct: 213 NALVQVLSSAGQVDLGFRVQKEMSESGFCMDRFTVGCFAHALCKEGRWADALDMIEREDF 272
Query: 297 MLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASD 356
LD V TH ++ + D+A + MR + C P++ +Y T+LS
Sbjct: 273 KLDT-VLCTH-----MISGLMEASYFDEAMSFLHRMRCNSCIPNVVTYRTLLSG------ 320
Query: 357 MEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTT 416
F + KQ G+ +I + M G PN ++F +
Sbjct: 321 -------FLKKKQLGWCKRII----------------------NMMMTEGCNPNPSLFNS 351
Query: 417 IMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILL 453
++ +Y KD+ A M +CG PP NI +
Sbjct: 352 LVHSYCNEKDYAYAYKLLNRMTTCGCPPGYVVYNIFI 388
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 78/189 (41%), Gaps = 40/189 (21%)
Query: 59 PKDLVLGTLV-RLKQLKKWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEK 117
P + G LV L + K + E+L+ + + S + N + + LI + K G + A++
Sbjct: 611 PNVVTYGALVDGLCKAHKVDHAHELLDAM-LSSGCEPNHIVYDALIDGFCKAGKIDSAQE 669
Query: 118 VLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFV 177
V M K GY PSV ++T+L++ + GR A + +M P+ +TY
Sbjct: 670 VFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYT------- 722
Query: 178 EANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQ 237
MI + G EKA KL +LM E+G
Sbjct: 723 -------------------------------AMIDGLCRIGESEKALKLLSLMEEKGCSP 751
Query: 238 STVTYNSLM 246
+ VTY +L+
Sbjct: 752 NVVTYTALI 760
Score = 39.7 bits (91), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 32/49 (65%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGR 143
N + + +I + G+ KA K+LS M +KG +P+VV++TAL++ G+
Sbjct: 717 NVVTYTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTALIDGLGQ 765
>gi|297803282|ref|XP_002869525.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297315361|gb|EFH45784.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 707
Score = 142 bits (359), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 116/466 (24%), Positives = 200/466 (42%), Gaps = 46/466 (9%)
Query: 65 GTLVRLKQLKKWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNK 124
G L Q++K VL L ++ + FN ++ +L+ + +F KA +L M +
Sbjct: 112 GLLECFVQMRKTGFAHGVLA-LMLKRGFAFNVYNYNILLKGLCRNLEFGKAVSLLREMRQ 170
Query: 125 KGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKE 184
P VVS+ ++ + G + A + MQ SG S +T+ I++ F +A K E
Sbjct: 171 NSLMPDVVSYNTVIRGFCEGKELEKALQLANEMQGSGCSWSLVTWGILIDAFCKAGKMDE 230
Query: 185 AEEVFMTLLDEEKSP-LKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYN 243
A M LL E K L+ D ++ +I + G ++ + LF + ERG +TYN
Sbjct: 231 A----MGLLKEMKHKGLEADLIVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYN 286
Query: 244 SLMSFETN---YKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDA 300
+L+ KE S+I++ M G++P+V +Y LI+ + +EAL + ML
Sbjct: 287 TLIRGFCKLGRLKEASEIFEFMMERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMLQK 346
Query: 301 GVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGA 360
P YNI+++ +V A + + M++ R PD +Y ++L D++ A
Sbjct: 347 DEEPNVVTYNIIINKLCKDSLVADALEIVELMKKRRTRPDNITYNSLLGGLCAKGDLDEA 406
Query: 361 EK-FFRRLKQDGFV-PNVITYGTLIKGYAKVNNLEKMMEIYD------------------ 400
K + LK + P+VI++ LI G K N L + ++IYD
Sbjct: 407 SKLLYLMLKDSSYTDPDVISFNALIHGLCKGNRLHQALDIYDLLVEKLGAGDIVTTNILL 466
Query: 401 -----------------KMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFP 443
++ + I PN +TT++D + K + A +M P
Sbjct: 467 NSTLKSGDVNKAMELWKQISNSKIVPNSDTYTTMIDGFCKTGMLNVAKGLLCKMRLSELP 526
Query: 444 PDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGINGLSISVD 489
P N LLS ++A L ++ P + +I +D
Sbjct: 527 PSVFDYNCLLSSLCKKGTLDQAWRLFEEMQRDDSFPDVISFNIMID 572
Score = 125 bits (315), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 89/408 (21%), Positives = 181/408 (44%), Gaps = 43/408 (10%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
LI + G+ ++ + + + ++G +P +++ L+ + + GR K A IF M G
Sbjct: 253 LIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGRLKEASEIFEFMMERG 312
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
RP+ TY ++ K KEA ++ +L +++ +P+ ++++I K
Sbjct: 313 VRPNVYTYTGLIDGLCGVGKTKEALQLLNLMLQKDE---EPNVVTYNIIINKLCKDSLVA 369
Query: 222 KARKLFALMAERGVQQSTVTYNSLM---SFETNYKEVSKIYDQMQR--AGLQPDVVSYAL 276
A ++ LM +R + +TYNSL+ + + E SK+ M + + PDV+S+
Sbjct: 370 DALEIVELMKKRRTRPDNITYNSLLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISFNA 429
Query: 277 LINAYGKARREEEALAVFE---EMLDAG-------------------------------- 301
LI+ K R +AL +++ E L AG
Sbjct: 430 LIHGLCKGNRLHQALDIYDLLVEKLGAGDIVTTNILLNSTLKSGDVNKAMELWKQISNSK 489
Query: 302 VRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAE 361
+ P Y ++D F +GM++ A+ + MR P + Y +LS+ ++ A
Sbjct: 490 IVPNSDTYTTMIDGFCKTGMLNVAKGLLCKMRLSELPPSVFDYNCLLSSLCKKGTLDQAW 549
Query: 362 KFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAY 421
+ F +++D P+VI++ +I G K +++ + M G+ P+ ++ +++ +
Sbjct: 550 RLFEEMQRDDSFPDVISFNIMIDGSLKAGDIKSAESLLVGMSHAGLSPDLFTYSKLINRF 609
Query: 422 GKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELL 469
K D A+ ++ +M GF PD + +L + E ++ E +
Sbjct: 610 LKLGYLDEAISFFDKMIDSGFEPDAHICDSVLKYCISQGETDKLTEFV 657
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 76/336 (22%), Positives = 153/336 (45%), Gaps = 6/336 (1%)
Query: 137 LMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEE 196
LM R ++ A + +R+M + + ++ +L+ FV+ K A V +L
Sbjct: 78 LMATLVRSRNHEVAFSFYRKMLETDTFINFVSLSGLLECFVQMRKTGFAHGVLALML--- 134
Query: 197 KSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVS 256
K + +++++ + + KA L M + + V+YN+++ KE+
Sbjct: 135 KRGFAFNVYNYNILLKGLCRNLEFGKAVSLLREMRQNSLMPDVVSYNTVIRGFCEGKELE 194
Query: 257 K---IYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILL 313
K + ++MQ +G +V++ +LI+A+ KA + +EA+ + +EM G+ Y L+
Sbjct: 195 KALQLANEMQGSGCSWSLVTWGILIDAFCKAGKMDEAMGLLKEMKHKGLEADLIVYTSLI 254
Query: 314 DAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFV 373
F G +D+ + +F + SP +Y T++ + ++ A + F + + G
Sbjct: 255 RGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGRLKEASEIFEFMMERGVR 314
Query: 374 PNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVW 433
PNV TY LI G V ++ +++ + M +PN + I++ K+ A+
Sbjct: 315 PNVYTYTGLIDGLCGVGKTKEALQLLNLMLQKDEEPNVVTYNIIINKLCKDSLVADALEI 374
Query: 434 YKEMESCGFPPDQKAKNILLSLAKTADERNEANELL 469
+ M+ PD N LL + +EA++LL
Sbjct: 375 VELMKKRRTRPDNITYNSLLGGLCAKGDLDEASKLL 410
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 82/400 (20%), Positives = 168/400 (42%), Gaps = 41/400 (10%)
Query: 59 PKDLVLGTLVR-LKQLKKWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEK 117
P + TL+R +L + SE+ E++ ++ N + LI G +A +
Sbjct: 280 PCAITYNTLIRGFCKLGRLKEASEIFEFM-MERGVRPNVYTYTGLIDGLCGVGKTKEALQ 338
Query: 118 VLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFV 177
+L+ M +K P+VV++ ++ + +A I M+ RP +TY +L
Sbjct: 339 LLNLMLQKDEEPNVVTYNIIINKLCKDSLVADALEIVELMKKRRTRPDNITYNSLLGGLC 398
Query: 178 EANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQ 237
EA ++ +L ++ S PD F+ +I+ K +A ++ L+ E+
Sbjct: 399 AKGDLDEASKLLYLML-KDSSYTDPDVISFNALIHGLCKGNRLHQALDIYDLLVEKLGAG 457
Query: 238 STVTYNSLMSFETNYKEVSK---IYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVF 294
VT N L++ +V+K ++ Q+ + + P+ +Y +I+ + K A +
Sbjct: 458 DIVTTNILLNSTLKSGDVNKAMELWKQISNSKIVPNSDTYTTMIDGFCKTGMLNVAKGLL 517
Query: 295 EEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRD------------------- 335
+M + + P+ YN LL + G +DQA +F+ M+RD
Sbjct: 518 CKMRLSELPPSVFDYNCLLSSLCKKGTLDQAWRLFEEMQRDDSFPDVISFNIMIDGSLKA 577
Query: 336 ----------------RCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITY 379
SPD+ +Y+ +++ ++ ++ A FF ++ GF P+
Sbjct: 578 GDIKSAESLLVGMSHAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMIDSGFEPDAHIC 637
Query: 380 GTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMD 419
+++K +K+ E K+ + ++ + T+MD
Sbjct: 638 DSVLKYCISQGETDKLTEFVKKLVDKDVVLDKELTCTVMD 677
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 57/271 (21%), Positives = 108/271 (39%), Gaps = 38/271 (14%)
Query: 223 ARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSK---IYDQMQRAGLQPDVVSYALLIN 279
A + ALM +RG + YN L+ E K + +M++ L PDVVSY +I
Sbjct: 126 AHGVLALMLKRGFAFNVYNYNILLKGLCRNLEFGKAVSLLREMRQNSLMPDVVSYNTVIR 185
Query: 280 AYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSP 339
+ + + E+AL + EM +G CS
Sbjct: 186 GFCEGKELEKALQLANEMQGSG-----------------------------------CSW 210
Query: 340 DICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIY 399
+ ++ ++ A+ A M+ A + +K G ++I Y +LI+G+ L++ ++
Sbjct: 211 SLVTWGILIDAFCKAGKMDEAMGLLKEMKHKGLEADLIVYTSLIRGFCDCGELDRGKALF 270
Query: 400 DKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTA 459
D++ G P + T++ + K A ++ M G P+ L+
Sbjct: 271 DEVLERGDSPCAITYNTLIRGFCKLGRLKEASEIFEFMMERGVRPNVYTYTGLIDGLCGV 330
Query: 460 DERNEANELLGNFNHPNNEPGINGLSISVDE 490
+ EA +LL + EP + +I +++
Sbjct: 331 GKTKEALQLLNLMLQKDEEPNVVTYNIIINK 361
>gi|334183592|ref|NP_001185295.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75179660|sp|Q9LQ15.1|PPR95_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g62914, mitochondrial; Flags: Precursor
gi|8493579|gb|AAF75802.1|AC011000_5 Contains a RepB PF|01051 protein domain and multiple PPR PF|01535
repeats. EST gb|AA728420 comes from this gene
[Arabidopsis thaliana]
gi|332195900|gb|AEE34021.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 528
Score = 142 bits (359), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 97/409 (23%), Positives = 205/409 (50%), Gaps = 18/409 (4%)
Query: 54 RGQPLPKDLVLGTLVR-LKQLKKWNVV---SEVLEWLRI-QSWWDFNEMDFLMLITAYGK 108
+ +P P + L+ + ++ K+++V E +E L I + + +N +LI + +
Sbjct: 71 QSRPFPSIIEFSKLLSAIAKMNKFDLVISFGEKMEILGISHNLYTYN-----ILINCFCR 125
Query: 109 QGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALT 168
+ A +L M K GY P +V+ +L+ + G R +A A+ +M G +P +T
Sbjct: 126 CSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGYKPDTVT 185
Query: 169 YQIILKLFVEANKFKEAEEVFMTLLDEE-KSPLKPDQKMFHMMIYMYKKAGGYEKARKLF 227
+ ++ NK EA + L+D + +PD + ++ K G + A L
Sbjct: 186 FTTLIHGLFLHNKASEA----VALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLL 241
Query: 228 ALMAERGVQQSTVTYNSLMSFETNYK---EVSKIYDQMQRAGLQPDVVSYALLINAYGKA 284
M ++ + V Y++++ Y+ + ++ +M+ G++P+V++Y+ LI+
Sbjct: 242 NKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNY 301
Query: 285 RREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSY 344
R +A + +M++ + P ++ L+DAF G + +A +++ M + P+I +Y
Sbjct: 302 GRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTY 361
Query: 345 TTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRV 404
+++++ + + A++ + + +PNV+TY TLI G+ K ++K ME++ +M
Sbjct: 362 SSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQ 421
Query: 405 NGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILL 453
G+ N +TT++ + + +D D+A + +K+M S G P+ NILL
Sbjct: 422 RGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILL 470
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 81/368 (22%), Positives = 164/368 (44%), Gaps = 35/368 (9%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
L+ + + A ++ M + GY P V+ T L+ + A A+ RM G
Sbjct: 154 LLNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRG 213
Query: 162 PRPSALTYQII-------------LKLF--VEANKFKEAEEVFMTLLDE----------- 195
+P +TY + L L +EA K + ++ T++D
Sbjct: 214 CQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDAL 273
Query: 196 ------EKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLM-SF 248
E ++P+ + +I G + A +L + M ER + + VT+++L+ +F
Sbjct: 274 NLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAF 333
Query: 249 ETNYKEVS--KIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTH 306
K V K+Y++M + + P++ +Y+ LIN + R EA + E M+ P
Sbjct: 334 VKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNV 393
Query: 307 KAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRR 366
YN L++ F + VD+ +F+ M + + +YTT++ + A D + A+ F++
Sbjct: 394 VTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQ 453
Query: 367 LKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKD 426
+ G PN++TY L+ G K L K M +++ ++ + ++P+ + +++ K
Sbjct: 454 MVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGK 513
Query: 427 FDSAVVWY 434
+ +++
Sbjct: 514 WKMGGIYF 521
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 55/229 (24%), Positives = 122/229 (53%), Gaps = 6/229 (2%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + + LI+ G ++ A ++LS M ++ P++V+ +AL++A+ + G+ AE ++
Sbjct: 287 NVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLY 346
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
M P+ TY ++ F ++ EA+++ ++ ++ P+ ++ +I +
Sbjct: 347 EEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKD---CLPNVVTYNTLINGF 403
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSLMS--FET-NYKEVSKIYDQMQRAGLQPDV 271
KA +K +LF M++RG+ +TVTY +L+ F+ + ++ QM G+ P++
Sbjct: 404 CKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNI 463
Query: 272 VSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISG 320
++Y +L++ K + +A+ VFE + + + P YNI+++ +G
Sbjct: 464 LTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAG 512
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 75/326 (23%), Positives = 134/326 (41%), Gaps = 10/326 (3%)
Query: 149 NAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMF- 207
+A +F M S P PS + + +L + NKF + E+ L ++
Sbjct: 61 DAIGLFGVMAQSRPFPSIIEFSKLLSAIAKMNKFD-----LVISFGEKMEILGISHNLYT 115
Query: 208 -HMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVS---KIYDQMQ 263
+++I + + A L M + G + VT NSL++ + +S + DQM
Sbjct: 116 YNILINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMV 175
Query: 264 RAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVD 323
G +PD V++ LI+ + EA+A+ + M+ G +P Y +++ G D
Sbjct: 176 EMGYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTD 235
Query: 324 QARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLI 383
A + M + ++ Y+T++ + + A F ++ G PNVITY +LI
Sbjct: 236 LALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLI 295
Query: 384 KGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFP 443
+ M I PN F+ ++DA+ K A Y+EM
Sbjct: 296 SCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSID 355
Query: 444 PDQKAKNILLSLAKTADERNEANELL 469
P+ + L++ D EA ++L
Sbjct: 356 PNIFTYSSLINGFCMLDRLGEAKQML 381
Score = 85.1 bits (209), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 65/270 (24%), Positives = 123/270 (45%), Gaps = 3/270 (1%)
Query: 223 ARKLFALMAERGVQQSTVTYNSLMSF---ETNYKEVSKIYDQMQRAGLQPDVVSYALLIN 279
A LF +MA+ S + ++ L+S + V ++M+ G+ ++ +Y +LIN
Sbjct: 62 AIGLFGVMAQSRPFPSIIEFSKLLSAIAKMNKFDLVISFGEKMEILGISHNLYTYNILIN 121
Query: 280 AYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSP 339
+ + R ALA+ +M+ G P N LL+ F + A + M P
Sbjct: 122 CFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGYKP 181
Query: 340 DICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIY 399
D ++TT++ + A R+ Q G P+++TYG ++ G K + + + +
Sbjct: 182 DTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLL 241
Query: 400 DKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTA 459
+KM I+ N I++T++D+ K + D A+ + EME+ G P+ + L+S
Sbjct: 242 NKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNY 301
Query: 460 DERNEANELLGNFNHPNNEPGINGLSISVD 489
++A+ LL + P + S +D
Sbjct: 302 GRWSDASRLLSDMIERKINPNLVTFSALID 331
Score = 45.4 bits (106), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 33/158 (20%), Positives = 65/158 (41%)
Query: 322 VDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGT 381
+D A +F M + R P I ++ +LSA + + F +++ G N+ TY
Sbjct: 59 LDDAIGLFGVMAQSRPFPSIIEFSKLLSAIAKMNKFDLVISFGEKMEILGISHNLYTYNI 118
Query: 382 LIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCG 441
LI + + + L + + KM G +P+ ++++ + AV +M G
Sbjct: 119 LINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMG 178
Query: 442 FPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEP 479
+ PD L+ ++ +EA L+ +P
Sbjct: 179 YKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQP 216
Score = 44.3 bits (103), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 22/89 (24%), Positives = 44/89 (49%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + + LI + + D + A+ V M G P+++++ L++ + G+ A +F
Sbjct: 427 NTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVF 486
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFK 183
+Q S P TY I+++ +A K+K
Sbjct: 487 EYLQRSTMEPDIYTYNIMIEGMCKAGKWK 515
Score = 38.5 bits (88), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 27/124 (21%), Positives = 54/124 (43%)
Query: 331 CMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVN 390
C RR Y +L ++ +++ A F + Q P++I + L+ AK+N
Sbjct: 33 CRRRAFSGKTSYDYREVLRTGLSDIELDDAIGLFGVMAQSRPFPSIIEFSKLLSAIAKMN 92
Query: 391 NLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKN 450
+ ++ +KM + GI N + +++ + + A+ +M G+ PD N
Sbjct: 93 KFDLVISFGEKMEILGISHNLYTYNILINCFCRCSRLSLALALLGKMMKLGYEPDIVTLN 152
Query: 451 ILLS 454
LL+
Sbjct: 153 SLLN 156
>gi|451798815|gb|AGF69111.1| PPR [Raphanus sativus]
Length = 479
Score = 142 bits (359), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 91/323 (28%), Positives = 155/323 (47%), Gaps = 16/323 (4%)
Query: 129 PSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEV 188
P+VV+ T LM R GR A A+ RM G +P+ +TY I+ + A +
Sbjct: 79 PNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKMGDTVSALNL 138
Query: 189 FMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMS- 247
+ EE S +KPD ++ +I K G + A+ LF M ++G+ VTY+ +++
Sbjct: 139 LRKM--EELSHIKPDVVIYSAIIDGLWKDGRHTDAQNLFIEMQDKGIFPDIVTYSCMING 196
Query: 248 FETN--YKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPT 305
F ++ + E ++ +M + PDVV+++ LINA K A + +EM+ +GV P
Sbjct: 197 FCSSGKWSEAQRLLQEMLVRKISPDVVTFSGLINALVKEGDLNSAQDLLQEMISSGVCPN 256
Query: 306 HKAYNILLDAFAISGMVDQARTVFKCMRR-----------DRCSPDICSYTTMLSAYVNA 354
N LLD SG + A +FK M++ + PD+ +Y ++S +N
Sbjct: 257 VVTCNTLLDGLCDSGKLKDALEMFKAMQKSMMDIDATHAFNGVEPDVQTYNILISGLINE 316
Query: 355 SDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIF 414
AE+ + + G VP+ +TY ++I G K + L++ +++D M PN F
Sbjct: 317 GKFLEAEELYEEMPHRGIVPDTVTYSSMINGLCKQSRLDEATQMFDSMGSKSFSPNIVTF 376
Query: 415 TTIMDAYGKNKDFDSAVVWYKEM 437
T++ Y K D + + EM
Sbjct: 377 NTLITGYCKAGMVDDGLELFCEM 399
Score = 141 bits (356), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 90/359 (25%), Positives = 174/359 (48%), Gaps = 18/359 (5%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYA-PSVVSHTALMEAYGRGGRYKNAEAI 153
N++ + ++ K GD A +L M + + P VV ++A+++ + GR+ +A+ +
Sbjct: 115 NQITYGTIVDGMCKMGDTVSALNLLRKMEELSHIKPDVVIYSAIIDGLWKDGRHTDAQNL 174
Query: 154 FRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYM 213
F MQ G P +TY ++ F + K+ EA+ + +L + SP D F +I
Sbjct: 175 FIEMQDKGIFPDIVTYSCMINGFCSSGKWSEAQRLLQEMLVRKISP---DVVTFSGLINA 231
Query: 214 YKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETN---YKEVSKIYDQMQRA----- 265
K G A+ L M GV + VT N+L+ + K+ +++ MQ++
Sbjct: 232 LVKEGDLNSAQDLLQEMISSGVCPNVVTCNTLLDGLCDSGKLKDALEMFKAMQKSMMDID 291
Query: 266 ------GLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAIS 319
G++PDV +Y +LI+ + EA ++EEM G+ P Y+ +++
Sbjct: 292 ATHAFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTVTYSSMINGLCKQ 351
Query: 320 GMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITY 379
+D+A +F M SP+I ++ T+++ Y A ++ + F + + G V N ITY
Sbjct: 352 SRLDEATQMFDSMGSKSFSPNIVTFNTLITGYCKAGMVDDGLELFCEMGRRGIVANAITY 411
Query: 380 GTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEME 438
TLI+G+ KV N+ ++I+ +M +G+ P+ ++ ++ A+ +E++
Sbjct: 412 ITLIRGFRKVGNINGSLDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRALAMLEELQ 470
Score = 115 bits (289), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 77/366 (21%), Positives = 162/366 (44%), Gaps = 22/366 (6%)
Query: 131 VVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFM 190
+ S L++ + + A + F ++ G P+ +T+ +L ++ EA ++F
Sbjct: 15 IYSFNILIKCFCSCSKLPFALSTFGKLTKLGFHPTLVTFNTLLHGLCVEDRVSEALDLFH 74
Query: 191 TLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFET 250
+ KP+ F ++ + G +A L M E G+Q + +TY +++
Sbjct: 75 QMC-------KPNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMC 127
Query: 251 NYKEVSKIYDQMQR----AGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTH 306
+ + +++ + ++PDVV Y+ +I+ K R +A +F EM D G+ P
Sbjct: 128 KMGDTVSALNLLRKMEELSHIKPDVVIYSAIIDGLWKDGRHTDAQNLFIEMQDKGIFPDI 187
Query: 307 KAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRR 366
Y+ +++ F SG +A+ + + M + SPD+ +++ +++A V D+ A+ +
Sbjct: 188 VTYSCMINGFCSSGKWSEAQRLLQEMLVRKISPDVVTFSGLINALVKEGDLNSAQDLLQE 247
Query: 367 LKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMR-----------VNGIKPNQTIFT 415
+ G PNV+T TL+ G L+ +E++ M+ NG++P+ +
Sbjct: 248 MISSGVCPNVVTCNTLLDGLCDSGKLKDALEMFKAMQKSMMDIDATHAFNGVEPDVQTYN 307
Query: 416 TIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHP 475
++ F A Y+EM G PD + +++ +EA ++ +
Sbjct: 308 ILISGLINEGKFLEAEELYEEMPHRGIVPDTVTYSSMINGLCKQSRLDEATQMFDSMGSK 367
Query: 476 NNEPGI 481
+ P I
Sbjct: 368 SFSPNI 373
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 102/209 (48%), Gaps = 7/209 (3%)
Query: 264 RAGLQ--PDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGM 321
+ GLQ D+ S+ +LI + + AL+ F ++ G PT +N LL +
Sbjct: 6 KHGLQIPCDIYSFNILIKCFCSCSKLPFALSTFGKLTKLGFHPTLVTFNTLLHGLCVEDR 65
Query: 322 VDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGT 381
V +A +F M C P++ ++TT+++ + A R+ +DG PN ITYGT
Sbjct: 66 VSEALDLFHQM----CKPNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGT 121
Query: 382 LIKGYAKVNNLEKMMEIYDKM-RVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESC 440
++ G K+ + + + KM ++ IKP+ I++ I+D K+ A + EM+
Sbjct: 122 IVDGMCKMGDTVSALNLLRKMEELSHIKPDVVIYSAIIDGLWKDGRHTDAQNLFIEMQDK 181
Query: 441 GFPPDQKAKNILLSLAKTADERNEANELL 469
G PD + +++ ++ + +EA LL
Sbjct: 182 GIFPDIVTYSCMINGFCSSGKWSEAQRLL 210
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 54/251 (21%), Positives = 91/251 (36%), Gaps = 79/251 (31%)
Query: 75 KWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSH 134
KW+ +L+ + ++ + + F LI A K+GD N A+ +L M G P+VV+
Sbjct: 202 KWSEAQRLLQEMLVRKISP-DVVTFSGLINALVKEGDLNSAQDLLQEMISSGVCPNVVTC 260
Query: 135 TALMEAYGRGGRYKNAEAIFRRMQSS-----------GPRPSALTYQIILKLFVEANKFK 183
L++ G+ K+A +F+ MQ S G P TY I++ + KF
Sbjct: 261 NTLLDGLCDSGKLKDALEMFKAMQKSMMDIDATHAFNGVEPDVQTYNILISGLINEGKFL 320
Query: 184 EAEEVF------------------------MTLLDEEKS--------PLKPDQKMFHMMI 211
EAEE++ + LDE P+ F+ +I
Sbjct: 321 EAEELYEEMPHRGIVPDTVTYSSMINGLCKQSRLDEATQMFDSMGSKSFSPNIVTFNTLI 380
Query: 212 YMYKKAGGYEKARKLFALMAERGVQQS--------------------------------- 238
Y KAG + +LF M RG+ +
Sbjct: 381 TGYCKAGMVDDGLELFCEMGRRGIVANAITYITLIRGFRKVGNINGSLDIFQEMISSGVY 440
Query: 239 --TVTYNSLMS 247
T+T ++++
Sbjct: 441 PDTITIRNMLT 451
>gi|317106735|dbj|BAJ53231.1| JHL06P13.11 [Jatropha curcas]
Length = 826
Score = 142 bits (359), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 100/356 (28%), Positives = 166/356 (46%), Gaps = 8/356 (2%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEA-YGRGGRYKNAEAIFRRMQSS 160
+I A+ K+G F +K+L M ++G A S+ +++A + G + A+A+ R M S
Sbjct: 278 MINAFCKKGKFEAVDKLLVEMKERGLAVSLQIFNGIIDARFKHGCEIEAADAV-RWMIES 336
Query: 161 GPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGY 220
G P TY ++ K +EAEE+ L + L P++ + +I+ + K G Y
Sbjct: 337 GCEPDMATYNTLINGSCSKGKVREAEEL---LEHAIRRGLFPNKFSYTPLIHAFSKNGEY 393
Query: 221 EKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVS---KIYDQMQRAGLQPDVVSYALL 277
+A +L M+ERG + Y +L+ EV + D+M G+ PD Y +L
Sbjct: 394 VRASELLIEMSERGHTLDLIAYGALVHGLVVAGEVDVALTVRDKMMERGILPDANIYNVL 453
Query: 278 INAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRC 337
++ K R A + EMLD V P L+D F G +D+A+ +F+
Sbjct: 454 MSGLCKKGRFPAAKQLLVEMLDQNVTPDAFVNATLVDGFIRHGNLDEAKKLFQLTIERGI 513
Query: 338 SPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMME 397
+ M+ Y M A F+R+ P+ TY T+I GY K N+L +
Sbjct: 514 DTSVVECNAMIKGYCKYGMMNDALLCFKRMFNGVHSPDEFTYSTIIDGYVKQNDLRGALR 573
Query: 398 IYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILL 453
++ M KPN FT++++ + +N D + A ++EM S GF P+ IL+
Sbjct: 574 MFGLMLKKTCKPNVVTFTSLINGFCRNGDLNRAEKVFEEMRSFGFEPNVVTYTILI 629
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 76/330 (23%), Positives = 149/330 (45%), Gaps = 35/330 (10%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N+ + LI A+ K G++ +A ++L M+++G+ ++++ AL+ G A +
Sbjct: 376 NKFSYTPLIHAFSKNGEYVRASELLIEMSERGHTLDLIAYGALVHGLVVAGEVDVALTVR 435
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
+M G P A Y +++ + +F A+++ + +LD+ + PD + ++ +
Sbjct: 436 DKMMERGILPDANIYNVLMSGLCKKGRFPAAKQLLVEMLDQN---VTPDAFVNATLVDGF 492
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSKIYDQMQRAGLQPDVVSY 274
+ G ++A+KLF L ERG+ S V N++
Sbjct: 493 IRHGNLDEAKKLFQLTIERGIDTSVVECNAM----------------------------- 523
Query: 275 ALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRR 334
I Y K +AL F+ M + P Y+ ++D + + A +F M +
Sbjct: 524 ---IKGYCKYGMMNDALLCFKRMFNGVHSPDEFTYSTIIDGYVKQNDLRGALRMFGLMLK 580
Query: 335 DRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEK 394
C P++ ++T++++ + D+ AEK F ++ GF PNV+TY LI + K L K
Sbjct: 581 KTCKPNVVTFTSLINGFCRNGDLNRAEKVFEEMRSFGFEPNVVTYTILIGYFCKEGKLTK 640
Query: 395 MMEIYDKMRVNGIKPNQTIFTTIMDAYGKN 424
+++M +N PN F +++ N
Sbjct: 641 ACFFFEQMLINKCIPNDATFNYLVNGLTNN 670
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 81/379 (21%), Positives = 154/379 (40%), Gaps = 11/379 (2%)
Query: 83 LEWLRIQSWWDFNEMDFLM---LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALME 139
EW QS N +D + L+ + F + E +L M K P+ + + ++
Sbjct: 81 FEWASKQSTLS-NSLDGFVCSSLLKLLARFRVFKEIENLLETMKSKELIPTCEALSFVIS 139
Query: 140 AYGRGGRYKNAEAIFRR-MQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKS 198
AY G K A ++ + P +L L V K + A +V+ ++D
Sbjct: 140 AYAGSGLVKEALELYNTVIDVHNCVPDVFACNSLLNLLVHHGKVEIARKVYDEMVDRNGD 199
Query: 199 PLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSK- 257
D ++ K G E+ R L +G + V YN+L+ ++ +
Sbjct: 200 V---DNYTVCIVTKGLCKEGKVEEGRHLIEKRWGKGCVPNIVFYNTLIDGYCKNGDIERA 256
Query: 258 --IYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDA 315
++ +++ G P V +Y +INA+ K + E + EM + G+ + + +N ++DA
Sbjct: 257 NLLFKELKVKGFLPTVKTYGAMINAFCKKGKFEAVDKLLVEMKERGLAVSLQIFNGIIDA 316
Query: 316 FAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPN 375
G +A + M C PD+ +Y T+++ + + AE+ + G PN
Sbjct: 317 RFKHGCEIEAADAVRWMIESGCEPDMATYNTLINGSCSKGKVREAEELLEHAIRRGLFPN 376
Query: 376 VITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYK 435
+Y LI ++K + E+ +M G + + ++ + D A+
Sbjct: 377 KFSYTPLIHAFSKNGEYVRASELLIEMSERGHTLDLIAYGALVHGLVVAGEVDVALTVRD 436
Query: 436 EMESCGFPPDQKAKNILLS 454
+M G PD N+L+S
Sbjct: 437 KMMERGILPDANIYNVLMS 455
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 77/301 (25%), Positives = 125/301 (41%), Gaps = 40/301 (13%)
Query: 172 ILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMA 231
+LKL FKE E + T+ +E L P + +I Y +G ++A +L
Sbjct: 102 LLKLLARFRVFKEIENLLETMKSKE---LIPTCEALSFVISAYAGSGLVKEALEL----- 153
Query: 232 ERGVQQSTVTYNSLMSFETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEAL 291
YN+++ PDV + L+N + E A
Sbjct: 154 ----------YNTVIDVHN----------------CVPDVFACNSLLNLLVHHGKVEIAR 187
Query: 292 AVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAY 351
V++EM+D + I+ G V++ R + + C P+I Y T++ Y
Sbjct: 188 KVYDEMVDRNGDVDNYTVCIVTKGLCKEGKVEEGRHLIEKRWGKGCVPNIVFYNTLIDGY 247
Query: 352 VNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQ 411
D+E A F+ LK GF+P V TYG +I + K E + ++ +M+ G+ +
Sbjct: 248 CKNGDIERANLLFKELKVKGFLPTVKTYGAMINAFCKKGKFEAVDKLLVEMKERGLAVSL 307
Query: 412 TIFTTIMDA---YGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANEL 468
IF I+DA +G + AV W M G PD N L++ + + + EA EL
Sbjct: 308 QIFNGIIDARFKHGCEIEAADAVRW---MIESGCEPDMATYNTLINGSCSKGKVREAEEL 364
Query: 469 L 469
L
Sbjct: 365 L 365
>gi|224133034|ref|XP_002327945.1| predicted protein [Populus trichocarpa]
gi|222837354|gb|EEE75733.1| predicted protein [Populus trichocarpa]
Length = 1450
Score = 142 bits (359), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 106/437 (24%), Positives = 181/437 (41%), Gaps = 80/437 (18%)
Query: 56 QPLPKDLVLGTLVRLKQLKKWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGK------- 108
Q P D +V+ + W+ EV EWL ++ W+ N ++ GK
Sbjct: 184 QMTPTDFCF--VVKSVGQESWHRAFEVYEWLNLRHWYSPNARMLSTILAVLGKANQEPLA 241
Query: 109 ---------------------------QGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAY 141
G FNK +++ M ++G P +VS L+ A
Sbjct: 242 VEVFTRAEPSVENTVKVYNAMMGVYARSGKFNKVQELFDLMRERGCEPDLVSFNTLINAR 301
Query: 142 GRGGRYKNAEAI--FRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSP 199
+ G AI ++ SG RP +TY ++ A+ +EA VF ++
Sbjct: 302 LKAGEMTPNLAIELLTEVRRSGLRPDIITYNTLISACSRASNLEEAVNVFDDMVAHH--- 358
Query: 200 LKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLM---SFETNYKEVS 256
+PD ++ MI +Y + G KA +LF + RG V+YNS + + E N ++V
Sbjct: 359 CEPDLWTYNAMISVYGRCGLSGKAEQLFNDLESRGFFPDAVSYNSFLYAFAREGNVEKVK 418
Query: 257 KI-----------------------------------YDQMQRAGLQPDVVSYALLINAY 281
I Y M+ +G PDV++Y +LI++
Sbjct: 419 DICEEMVKIGFGKDEMTYNTMIHMYGKQGQNDLALQLYRDMKSSGRNPDVITYTVLIDSL 478
Query: 282 GKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDI 341
GK + EEA + EML+ GV+PT + Y+ L+ +A +G +A F CM R PD
Sbjct: 479 GKTNKIEEAAGMMSEMLNTGVKPTLRTYSALICGYAKAGKPVEAEETFDCMLRSGTRPDQ 538
Query: 342 CSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDK 401
+Y+ ML ++ ++ + A F++ + DG +P Y +++ N +E + +
Sbjct: 539 LAYSVMLDIHLRFNEPKRAMTFYKEMIHDGIMPEHSLYELMLRTLGNANKVEDIGRVVRD 598
Query: 402 M-RVNGIKPNQTIFTTI 417
M V G+ P + +
Sbjct: 599 MEEVCGMNPQAISYILV 615
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 91/401 (22%), Positives = 184/401 (45%), Gaps = 7/401 (1%)
Query: 72 QLKKWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSV 131
+LK W V +R QS N + LI AY G + +A V + M K G +P+V
Sbjct: 792 RLKLWQKAESVAGNMR-QSCITVNRKVWNALIEAYAASGCYERARAVFNTMMKDGPSPTV 850
Query: 132 VSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMT 191
S L++A GR + + + +Q G + S + ++L F A E ++++
Sbjct: 851 DSINGLLQALIVDGRLEELYVVVQELQDIGFKISKSSILLMLDAFARAGNIFEVKKIYHG 910
Query: 192 LLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFET- 250
+ + + P ++ +M + + + + M E G + +NS++
Sbjct: 911 M---KAAGYFPSMHLYRVMAQLLCRGKQVRDVEAMLSEMEEAGFKPDLSIWNSVLKMYVA 967
Query: 251 --NYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKA 308
++++ ++IY +++ GL+PD +Y +LI Y + R +E L + +EM G+ P
Sbjct: 968 IDDFRKTTQIYQRIKEDGLEPDEDTYNILIVMYCRDHRPKEGLVLMDEMRTVGLEPKLDT 1027
Query: 309 YNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLK 368
Y L+ +F +V+QA +F+ ++ C D Y M+ Y N+ A++ F +K
Sbjct: 1028 YKSLVASFGKQQLVEQAEELFEELQSTGCKLDRSFYHIMMKIYRNSGSHSKAQRLFSMMK 1087
Query: 369 QDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFD 428
+G P + T L+ Y ++ ++ ++ + +++++DAY +N D++
Sbjct: 1088 DEGVEPTIATMHLLMVSYGSSGQPQEAEKVLSNLKETDANLSTLPYSSVIDAYVRNGDYN 1147
Query: 429 SAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELL 469
+ + K+++ G PD + + A + +EA LL
Sbjct: 1148 AGIQKLKQVKEEGLEPDHRIWTCFIRAASLSQHTSEAILLL 1188
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 84/331 (25%), Positives = 161/331 (48%), Gaps = 9/331 (2%)
Query: 164 PSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKA 223
P+A IL + +AN+ A EVF + ++ K+++ M+ +Y ++G + K
Sbjct: 220 PNARMLSTILAVLGKANQEPLAVEVF----TRAEPSVENTVKVYNAMMGVYARSGKFNKV 275
Query: 224 RKLFALMAERGVQQSTVTYNSLMSFETNYKEVS-----KIYDQMQRAGLQPDVVSYALLI 278
++LF LM ERG + V++N+L++ E++ ++ +++R+GL+PD+++Y LI
Sbjct: 276 QELFDLMRERGCEPDLVSFNTLINARLKAGEMTPNLAIELLTEVRRSGLRPDIITYNTLI 335
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCS 338
+A +A EEA+ VF++M+ P YN ++ + G+ +A +F +
Sbjct: 336 SACSRASNLEEAVNVFDDMVAHHCEPDLWTYNAMISVYGRCGLSGKAEQLFNDLESRGFF 395
Query: 339 PDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEI 398
PD SY + L A+ ++E + + + GF + +TY T+I Y K + +++
Sbjct: 396 PDAVSYNSFLYAFAREGNVEKVKDICEEMVKIGFGKDEMTYNTMIHMYGKQGQNDLALQL 455
Query: 399 YDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKT 458
Y M+ +G P+ +T ++D+ GK + A EM + G P + + L+
Sbjct: 456 YRDMKSSGRNPDVITYTVLIDSLGKTNKIEEAAGMMSEMLNTGVKPTLRTYSALICGYAK 515
Query: 459 ADERNEANELLGNFNHPNNEPGINGLSISVD 489
A + EA E P S+ +D
Sbjct: 516 AGKPVEAEETFDCMLRSGTRPDQLAYSVMLD 546
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 82/392 (20%), Positives = 179/392 (45%), Gaps = 7/392 (1%)
Query: 99 FLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQ 158
F LI + F +A +V S M G S + ++M Y + G + A + +
Sbjct: 712 FEALIQCCLENELFTEASQVFSDMRFCGIKASECLYQSMMLLYCKMGFPETAHHLIDLTE 771
Query: 159 SSGPRPSALT-YQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKA 217
+ G + ++ Y +++ + +++AE V + +S + ++K+++ +I Y +
Sbjct: 772 TDGTVLNNISVYVDVIEAYGRLKLWQKAESVAGNM---RQSCITVNRKVWNALIEAYAAS 828
Query: 218 GGYEKARKLFALMAERGVQQSTVTYNSLMS---FETNYKEVSKIYDQMQRAGLQPDVVSY 274
G YE+AR +F M + G + + N L+ + +E+ + ++Q G + S
Sbjct: 829 GCYERARAVFNTMMKDGPSPTVDSINGLLQALIVDGRLEELYVVVQELQDIGFKISKSSI 888
Query: 275 ALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRR 334
L+++A+ +A E ++ M AG P+ Y ++ V + M
Sbjct: 889 LLMLDAFARAGNIFEVKKIYHGMKAAGYFPSMHLYRVMAQLLCRGKQVRDVEAMLSEMEE 948
Query: 335 DRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEK 394
PD+ + ++L YV D + ++R+K+DG P+ TY LI Y + + ++
Sbjct: 949 AGFKPDLSIWNSVLKMYVAIDDFRKTTQIYQRIKEDGLEPDEDTYNILIVMYCRDHRPKE 1008
Query: 395 MMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLS 454
+ + D+MR G++P + +++ ++GK + + A ++E++S G D+ +I++
Sbjct: 1009 GLVLMDEMRTVGLEPKLDTYKSLVASFGKQQLVEQAEELFEELQSTGCKLDRSFYHIMMK 1068
Query: 455 LAKTADERNEANELLGNFNHPNNEPGINGLSI 486
+ + + ++A L EP I + +
Sbjct: 1069 IYRNSGSHSKAQRLFSMMKDEGVEPTIATMHL 1100
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 60/342 (17%), Positives = 136/342 (39%), Gaps = 42/342 (12%)
Query: 145 GRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQ 204
GR+ A + ++ PR S + + ++ + +A + A + + + +
Sbjct: 653 GRHSVALDLLELLKEHTPRSSQMITEALVVMLCKAQQLDTALKEYS---NSRELGFTGSF 709
Query: 205 KMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSF--ETNYKEVSK-IYDQ 261
MF +I + + +A ++F+ M G++ S Y S+M + + E + + D
Sbjct: 710 TMFEALIQCCLENELFTEASQVFSDMRFCGIKASECLYQSMMLLYCKMGFPETAHHLIDL 769
Query: 262 MQRAGLQPDVVS-YALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISG 320
+ G + +S Y +I AYG+ + ++A +V M + + K +N L++A+A SG
Sbjct: 770 TETDGTVLNNISVYVDVIEAYGRLKLWQKAESVAGNMRQSCITVNRKVWNALIEAYAASG 829
Query: 321 MVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYG 380
++AR V F + +DG P V +
Sbjct: 830 CYERARAV-----------------------------------FNTMMKDGPSPTVDSIN 854
Query: 381 TLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESC 440
L++ LE++ + +++ G K +++ ++DA+ + + Y M++
Sbjct: 855 GLLQALIVDGRLEELYVVVQELQDIGFKISKSSILLMLDAFARAGNIFEVKKIYHGMKAA 914
Query: 441 GFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGIN 482
G+ P ++ L + + +L +P ++
Sbjct: 915 GYFPSMHLYRVMAQLLCRGKQVRDVEAMLSEMEEAGFKPDLS 956
>gi|414591656|tpg|DAA42227.1| TPA: PPR-814a [Zea mays]
Length = 816
Score = 142 bits (359), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 91/358 (25%), Positives = 171/358 (47%), Gaps = 8/358 (2%)
Query: 101 MLITAYGKQGDFNKAEKVLSFMNKKG--YAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQ 158
+L+ + QG +A+ +L M + G +P VV++ +++ + + G A +F+ M
Sbjct: 189 ILLKSLCNQGKSGQADDLLRMMAEGGTVCSPDVVAYNTVIDGFFKEGDVNKACDLFKEMV 248
Query: 159 SSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAG 218
G P +TY ++ +A +AE ++++ + PD ++ +IY Y G
Sbjct: 249 QRGIPPDLVTYSSVVHALCKARAMDKAEAFLRQMVNKG---VLPDNWTYNNLIYGYSSTG 305
Query: 219 GYEKARKLFALMAERGVQQSTVTYNSLMSFETNY---KEVSKIYDQMQRAGLQPDVVSYA 275
+++A ++F M + + V N+LM Y KE ++D M G PDV SY
Sbjct: 306 QWKEAVRVFKEMRRQSILPDVVALNTLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYT 365
Query: 276 LLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRD 335
+++N Y + +F+ ML G+ P +N+L+ A+A GM+D+A +F MR
Sbjct: 366 IMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFNVLIKAYANCGMLDKAMIIFNEMRDH 425
Query: 336 RCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKM 395
P + +Y T+++A M+ A + F ++ G VP+ Y LI+G+ +L K
Sbjct: 426 GVKPHVVTYMTVIAALCRIGKMDDAMEKFNQMIDQGVVPDKYAYHCLIQGFCTHGSLLKA 485
Query: 396 MEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILL 453
E+ ++ NG++ + F +I++ K A + + G PD N+L+
Sbjct: 486 KELISEIMNNGMRLDIVFFGSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLM 543
Score = 142 bits (357), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 100/364 (27%), Positives = 170/364 (46%), Gaps = 8/364 (2%)
Query: 113 NKAEKVLSFMN---KKGYAPSVVSHTALMEAYGRGGRYKNA-EAIFRRMQSSGPRPSALT 168
++ E L+F + G + + L++ + R A + + R G P +
Sbjct: 127 HRPELALAFFGQLLRTGLRVDAIIASHLLKGFCEAKRTDEALDILLHRTPELGCVPDVFS 186
Query: 169 YQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFA 228
Y I+LK K +A+++ + ++ E + PD ++ +I + K G KA LF
Sbjct: 187 YNILLKSLCNQGKSGQADDL-LRMMAEGGTVCSPDVVAYNTVIDGFFKEGDVNKACDLFK 245
Query: 229 LMAERGVQQSTVTYNSLMSFETNYKEVSK---IYDQMQRAGLQPDVVSYALLINAYGKAR 285
M +RG+ VTY+S++ + + K QM G+ PD +Y LI Y
Sbjct: 246 EMVQRGIPPDLVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPDNWTYNNLIYGYSSTG 305
Query: 286 REEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYT 345
+ +EA+ VF+EM + P A N L+ + G + +AR VF M +PD+ SYT
Sbjct: 306 QWKEAVRVFKEMRRQSILPDVVALNTLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYT 365
Query: 346 TMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVN 405
ML+ Y + F + DG P++ T+ LIK YA L+K M I+++MR +
Sbjct: 366 IMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFNVLIKAYANCGMLDKAMIIFNEMRDH 425
Query: 406 GIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEA 465
G+KP+ + T++ A + D A+ + +M G PD+ A + L+ T +A
Sbjct: 426 GVKPHVVTYMTVIAALCRIGKMDDAMEKFNQMIDQGVVPDKYAYHCLIQGFCTHGSLLKA 485
Query: 466 NELL 469
EL+
Sbjct: 486 KELI 489
Score = 139 bits (349), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 103/447 (23%), Positives = 185/447 (41%), Gaps = 46/447 (10%)
Query: 44 AVAVLRSERTRGQPLPKDLVLGTLVRLKQLKKWNVVSEVLEWLRIQSWWDFNE--MDFLM 101
AV V + R R LP + L TL + L K+ + E + + N + +
Sbjct: 310 AVRVFKEMR-RQSILPDVVALNTL--MGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYTI 366
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
++ Y +G + M G AP + + L++AY G A IF M+ G
Sbjct: 367 MLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFNVLIKAYANCGMLDKAMIIFNEMRDHG 426
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
+P +TY ++ K +A E F ++D+ + PD+ +H +I + G
Sbjct: 427 VKPHVVTYMTVIAALCRIGKMDDAMEKFNQMIDQG---VVPDKYAYHCLIQGFCTHGSLL 483
Query: 222 KARKL-----------------------------------FALMAERGVQQSTVTYNSLM 246
KA++L F L G+ V YN LM
Sbjct: 484 KAKELISEIMNNGMRLDIVFFGSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLM 543
Query: 247 ---SFETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVR 303
++ +++D M AG++P+VV Y L+N Y K R +E L++F EML G++
Sbjct: 544 DGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQKGIK 603
Query: 304 PTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKF 363
P+ YNI++D +G A+ F M + + C+Y+ +L + A
Sbjct: 604 PSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYSIVLRGLFKNRCFDEAIFL 663
Query: 364 FRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGK 423
F+ L+ ++IT T+I G + +E+ +++ + +G+ P ++ ++ K
Sbjct: 664 FKELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDLFASISRSGLVPCAVTYSIMITNLLK 723
Query: 424 NKDFDSAVVWYKEMESCGFPPDQKAKN 450
+ A + M++ G PD + N
Sbjct: 724 EGLVEEAEDMFSSMQNAGCEPDSRLLN 750
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 108/494 (21%), Positives = 204/494 (41%), Gaps = 56/494 (11%)
Query: 40 EVGSAVAVLRSERTRGQPLPKDLVLGTLVRLKQLKKWNVVSEVLEWLR-------IQSWW 92
+V A + + RG +P DLV + V + L K + + +LR + W
Sbjct: 236 DVNKACDLFKEMVQRG--IPPDLVTYSSV-VHALCKARAMDKAEAFLRQMVNKGVLPDNW 292
Query: 93 DFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEA 152
+N LI Y G + +A +V M ++ P VV+ LM + + G+ K A
Sbjct: 293 TYNN-----LIYGYSSTGQWKEAVRVFKEMRRQSILPDVVALNTLMGSLCKYGKIKEARD 347
Query: 153 IFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIY 212
+F M G P +Y I+L + + ++F +L + + PD F+++I
Sbjct: 348 VFDTMAMKGQNPDVFSYTIMLNGYATKGCLVDMTDLFDLMLGDG---IAPDIYTFNVLIK 404
Query: 213 MYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMS------------------------- 247
Y G +KA +F M + GV+ VTY ++++
Sbjct: 405 AYANCGMLDKAMIIFNEMRDHGVKPHVVTYMTVIAALCRIGKMDDAMEKFNQMIDQGVVP 464
Query: 248 -----------FETN--YKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVF 294
F T+ + ++ ++ G++ D+V + +IN K R +A +F
Sbjct: 465 DKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMRLDIVFFGSIINNLCKLGRVMDAQNIF 524
Query: 295 EEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNA 354
+ ++ G+ P YN+L+D + + G +++A VF M P++ Y T+++ Y
Sbjct: 525 DLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKI 584
Query: 355 SDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIF 414
++ FR + Q G P+ I Y +I G + + +M +GI N+ +
Sbjct: 585 GRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTY 644
Query: 415 TTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNH 474
+ ++ KN+ FD A+ +KE+ + D N +++ EA +L + +
Sbjct: 645 SIVLRGLFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDLFASISR 704
Query: 475 PNNEPGINGLSISV 488
P SI +
Sbjct: 705 SGLVPCAVTYSIMI 718
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/232 (26%), Positives = 105/232 (45%), Gaps = 7/232 (3%)
Query: 233 RGVQQSTVTYNSLMSFETNYKE---VSKIYDQMQRAGLQPDVVSYALLINAYGKARREEE 289
R + ++ TY LM T + Q+ R GL+ D + + L+ + +A+R +E
Sbjct: 107 RVLSPTSYTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDAIIASHLLKGFCEAKRTDE 166
Query: 290 ALAVF-EEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRR--DRCSPDICSYTT 346
AL + + G P +YNILL + G QA + + M CSPD+ +Y T
Sbjct: 167 ALDILLHRTPELGCVPDVFSYNILLKSLCNQGKSGQADDLLRMMAEGGTVCSPDVVAYNT 226
Query: 347 MLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNG 406
++ + D+ A F+ + Q G P+++TY +++ K ++K +M G
Sbjct: 227 VIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMDKAEAFLRQMVNKG 286
Query: 407 IKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILL-SLAK 457
+ P+ + ++ Y + AV +KEM PD A N L+ SL K
Sbjct: 287 VLPDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVALNTLMGSLCK 338
>gi|356560325|ref|XP_003548443.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
mitochondrial-like [Glycine max]
Length = 746
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 94/364 (25%), Positives = 172/364 (47%), Gaps = 16/364 (4%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
L+T G+ D + ++L+ M K+ PSVV+ L+ + R A +F R++ G
Sbjct: 287 LLTWLGRGRDIKRMNELLAEMEKRKIRPSVVTFGILVNHLCKARRIDEALQVFDRLRGKG 346
Query: 162 ------PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEK--SPLKPDQKMFHMMIYM 213
P + + ++ + K EE ++LL+E K + +P+ ++ +I
Sbjct: 347 GSNWVGVEPDVVLFNTLIDGLCKVGK----EEDGLSLLEEMKMGNINRPNTVTYNCLIDG 402
Query: 214 YKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSK---IYDQMQRAGLQPD 270
+ KAG +++A +LF M E GVQ + +T N+L+ + V + +++M+ GL+ +
Sbjct: 403 FFKAGNFDRAHELFRQMNEEGVQPNVITLNTLVDGLCKHGRVHRAVEFFNEMKGKGLKGN 462
Query: 271 VVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFK 330
+Y LI+A+ A+ FEEML +G P Y L+ I+G ++ A V
Sbjct: 463 AATYTALISAFCGVNNINRAMQCFEEMLSSGCSPDAVVYYSLISGLCIAGRMNDASVVVS 522
Query: 331 CMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVN 390
++ S D Y ++S + +E + +++ G P+ ITY TLI K
Sbjct: 523 KLKLAGFSLDRSCYNVLISGFCKKKKLERVYELLTEMEETGVKPDTITYNTLISYLGKTG 582
Query: 391 NLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCG-FPPDQKAK 449
+ ++ +KM G++P+ + I+ AY K+ D + + EM S PP+
Sbjct: 583 DFATASKVMEKMIKEGLRPSVVTYGAIIHAYCSKKNVDEGMKIFGEMCSTSKVPPNTVIY 642
Query: 450 NILL 453
NIL+
Sbjct: 643 NILI 646
Score = 140 bits (352), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 105/396 (26%), Positives = 177/396 (44%), Gaps = 26/396 (6%)
Query: 76 WNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDF-------------------NKAE 116
++V E++ ++S F + + + L+ G++G F A
Sbjct: 207 FSVTGEIVFGELVRSGRSFPDGEVVGLVAKLGERGVFPDGFKLTQLVGKLCGDQKNGVAW 266
Query: 117 KVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLF 176
+VL + + G A S AL+ GRG K + M+ RPS +T+ I++
Sbjct: 267 EVLHCVMRLGGAVDAASCNALLTWLGRGRDIKRMNELLAEMEKRKIRPSVVTFGILVNHL 326
Query: 177 VEANKFKEAEEVFMTLLDEEKS---PLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAER 233
+A + EA +VF L + S ++PD +F+ +I K G E L M
Sbjct: 327 CKARRIDEALQVFDRLRGKGGSNWVGVEPDVVLFNTLIDGLCKVGKEEDGLSLLEEMKMG 386
Query: 234 GVQQ-STVTYNSLMS--FET-NYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEE 289
+ + +TVTYN L+ F+ N+ +++ QM G+QP+V++ L++ K R
Sbjct: 387 NINRPNTVTYNCLIDGFFKAGNFDRAHELFRQMNEEGVQPNVITLNTLVDGLCKHGRVHR 446
Query: 290 ALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLS 349
A+ F EM G++ Y L+ AF +++A F+ M CSPD Y +++S
Sbjct: 447 AVEFFNEMKGKGLKGNAATYTALISAFCGVNNINRAMQCFEEMLSSGCSPDAVVYYSLIS 506
Query: 350 AYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKP 409
A M A +LK GF + Y LI G+ K LE++ E+ +M G+KP
Sbjct: 507 GLCIAGRMNDASVVVSKLKLAGFSLDRSCYNVLISGFCKKKKLERVYELLTEMEETGVKP 566
Query: 410 NQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPD 445
+ + T++ GK DF +A ++M G P
Sbjct: 567 DTITYNTLISYLGKTGDFATASKVMEKMIKEGLRPS 602
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 85/337 (25%), Positives = 156/337 (46%), Gaps = 36/337 (10%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + + LI + K G+F++A ++ MN++G P+V++ L++ + GR A F
Sbjct: 392 NTVTYNCLIDGFFKAGNFDRAHELFRQMNEEGVQPNVITLNTLVDGLCKHGRVHRAVEFF 451
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSP--------------- 199
M+ G + +A TY ++ F N A + F +L SP
Sbjct: 452 NEMKGKGLKGNAATYTALISAFCGVNNINRAMQCFEEMLSSGCSPDAVVYYSLISGLCIA 511
Query: 200 -----------------LKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTY 242
D+ ++++I + K E+ +L M E GV+ T+TY
Sbjct: 512 GRMNDASVVVSKLKLAGFSLDRSCYNVLISGFCKKKKLERVYELLTEMEETGVKPDTITY 571
Query: 243 NSLMSF---ETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLD 299
N+L+S+ ++ SK+ ++M + GL+P VV+Y +I+AY + +E + +F EM
Sbjct: 572 NTLISYLGKTGDFATASKVMEKMIKEGLRPSVVTYGAIIHAYCSKKNVDEGMKIFGEMCS 631
Query: 300 AG-VRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDME 358
V P YNIL+DA + VD+A ++ + M+ R P+ +Y +L + +
Sbjct: 632 TSKVPPNTVIYNILIDALCRNNDVDRAISLMEDMKVKRVRPNTTTYNAILKGVRDKKMLH 691
Query: 359 GAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKM 395
A + R+ ++ P+ IT L + + V +EK+
Sbjct: 692 KAFELMDRMVEEACRPDYITMEVLTEWLSAVGEIEKL 728
Score = 115 bits (288), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 98/444 (22%), Positives = 182/444 (40%), Gaps = 20/444 (4%)
Query: 21 DAADEAGKKNWRRLMNQIEEVGSAVAVLRSERTRGQPLPKDLVLGTLV-RLKQLKKWNVV 79
DAA W I+ + +A + + R P + G LV L + ++ +
Sbjct: 280 DAASCNALLTWLGRGRDIKRMNELLAEMEKRKIR----PSVVTFGILVNHLCKARRIDEA 335
Query: 80 SEVLEWLRIQ--SWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYA----PSVVS 133
+V + LR + S W E D ++ T K E LS + + P+ V+
Sbjct: 336 LQVFDRLRGKGGSNWVGVEPDVVLFNTLIDGLCKVGKEEDGLSLLEEMKMGNINRPNTVT 395
Query: 134 HTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLL 193
+ L++ + + G + A +FR+M G +P+ +T ++ + + A E F
Sbjct: 396 YNCLIDGFFKAGNFDRAHELFRQMNEEGVQPNVITLNTLVDGLCKHGRVHRAVEFF---- 451
Query: 194 DEEKSP-LKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMS---FE 249
+E K LK + + +I + +A + F M G V Y SL+S
Sbjct: 452 NEMKGKGLKGNAATYTALISAFCGVNNINRAMQCFEEMLSSGCSPDAVVYYSLISGLCIA 511
Query: 250 TNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAY 309
+ S + +++ AG D Y +LI+ + K ++ E + EM + GV+P Y
Sbjct: 512 GRMNDASVVVSKLKLAGFSLDRSCYNVLISGFCKKKKLERVYELLTEMEETGVKPDTITY 571
Query: 310 NILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQ 369
N L+ +G A V + M ++ P + +Y ++ AY + +++ K F +
Sbjct: 572 NTLISYLGKTGDFATASKVMEKMIKEGLRPSVVTYGAIIHAYCSKKNVDEGMKIFGEMCS 631
Query: 370 DGFVP-NVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFD 428
VP N + Y LI + N++++ + + + M+V ++PN T + I+ K
Sbjct: 632 TSKVPPNTVIYNILIDALCRNNDVDRAISLMEDMKVKRVRPNTTTYNAILKGVRDKKMLH 691
Query: 429 SAVVWYKEMESCGFPPDQKAKNIL 452
A M PD +L
Sbjct: 692 KAFELMDRMVEEACRPDYITMEVL 715
Score = 108 bits (270), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 116/221 (52%), Gaps = 7/221 (3%)
Query: 253 KEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLD------AGVRPTH 306
K ++++ +M++ ++P VV++ +L+N KARR +EAL VF+ + GV P
Sbjct: 298 KRMNELLAEMEKRKIRPSVVTFGILVNHLCKARRIDEALQVFDRLRGKGGSNWVGVEPDV 357
Query: 307 KAYNILLDAFAISGMVDQARTVFKCMRRDRCS-PDICSYTTMLSAYVNASDMEGAEKFFR 365
+N L+D G + ++ + M+ + P+ +Y ++ + A + + A + FR
Sbjct: 358 VLFNTLIDGLCKVGKEEDGLSLLEEMKMGNINRPNTVTYNCLIDGFFKAGNFDRAHELFR 417
Query: 366 RLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNK 425
++ ++G PNVIT TL+ G K + + +E +++M+ G+K N +T ++ A+
Sbjct: 418 QMNEEGVQPNVITLNTLVDGLCKHGRVHRAVEFFNEMKGKGLKGNAATYTALISAFCGVN 477
Query: 426 DFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEAN 466
+ + A+ ++EM S G PD L+S A N+A+
Sbjct: 478 NINRAMQCFEEMLSSGCSPDAVVYYSLISGLCIAGRMNDAS 518
Score = 104 bits (260), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 70/286 (24%), Positives = 125/286 (43%), Gaps = 46/286 (16%)
Query: 221 EKARKLFALMAERGVQQSTVTYNSLMSFETNYK---EVSKIYDQMQR------AGLQPDV 271
++ +L A M +R ++ S VT+ L++ + E +++D+++ G++PDV
Sbjct: 298 KRMNELLAEMEKRKIRPSVVTFGILVNHLCKARRIDEALQVFDRLRGKGGSNWVGVEPDV 357
Query: 272 VSYALLINAYGKARREEEALAVFEEMLDAGV-RPTHKAYNILLDAFAISGMVDQARTVFK 330
V + LI+ K +EE+ L++ EEM + RP YN L+D F +G D+A +F+
Sbjct: 358 VLFNTLIDGLCKVGKEEDGLSLLEEMKMGNINRPNTVTYNCLIDGFFKAGNFDRAHELFR 417
Query: 331 CMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVN 390
M + P++ + T++ + A +FF +K G N TY LI + VN
Sbjct: 418 QMNEEGVQPNVITLNTLVDGLCKHGRVHRAVEFFNEMKGKGLKGNAATYTALISAFCGVN 477
Query: 391 NLEKMMEIYDKMRVNGIKPNQTIF-----------------------------------T 415
N+ + M+ +++M +G P+ ++
Sbjct: 478 NINRAMQCFEEMLSSGCSPDAVVYYSLISGLCIAGRMNDASVVVSKLKLAGFSLDRSCYN 537
Query: 416 TIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLS-LAKTAD 460
++ + K K + EME G PD N L+S L KT D
Sbjct: 538 VLISGFCKKKKLERVYELLTEMEETGVKPDTITYNTLISYLGKTGD 583
>gi|414882130|tpg|DAA59261.1| TPA: hypothetical protein ZEAMMB73_845952 [Zea mays]
Length = 1603
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 112/450 (24%), Positives = 200/450 (44%), Gaps = 51/450 (11%)
Query: 47 VLRSERTRGQ-PLPKDL----VLGTLVRLKQLKKWNVVSEVLEWLRIQSWWDFNEMDFLM 101
+L+ TRG LP D+ V+ L R L++ +E++E +R+ + +
Sbjct: 1141 LLKEMETRGSGCLPNDVTYNVVITGLTRKGDLEE---AAELVEGMRLSK--KASSFTYNP 1195
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
LIT +G K + M +G P+VV++ A++ + G + A+ F M++ G
Sbjct: 1196 LITGLLARGCVKKVYDLQLEMENEGIMPTVVTYNAMIHGLLQSGLVEAAQVKFAEMRAMG 1255
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
P +TY +L + +A KEA +F D ++ L P ++++I Y + G E
Sbjct: 1256 LLPDVITYNSLLNGYCKAGNLKEALLLFG---DLRRAGLAPTVLTYNILIDGYCRLGDLE 1312
Query: 222 KARKLFALMAERGVQQSTVTYNSLMSFETNYKEVS---KIYDQMQRAGLQPDV------- 271
+AR L M E+G + TY LM N + ++ + +D+M GLQPD
Sbjct: 1313 EARILKEEMGEQGCLPNVCTYTILMKGSLNVRSLAMAREFFDEMLSKGLQPDCFAYNTRI 1372
Query: 272 ----------------------------VSYALLINAYGKARREEEALAVFEEMLDAGVR 303
V+Y +LI+ K ++A + +M+ G++
Sbjct: 1373 CAELILGDIARAFELREVLMLEGISSDTVTYNILIHGLCKTGNLKDAKELQMKMVSNGLQ 1432
Query: 304 PTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKF 363
P Y L+ A G++ +AR +F M D P ++T ++ AY ++ A +
Sbjct: 1433 PDCITYTCLIHAHCERGLLREARKIFNNMISDGLLPSAVTFTVIIHAYCRRGNLYSAYGW 1492
Query: 364 FRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGK 423
FR++ ++G PN ITY LI ++ + + +M G+ N+ +T ++D K
Sbjct: 1493 FRKMLEEGVEPNEITYNVLIHALCRMGRTQLASHHFHEMLERGLVANKYTYTLLIDGNCK 1552
Query: 424 NKDFDSAVVWYKEMESCGFPPDQKAKNILL 453
+++ A+ +Y EM G PD LL
Sbjct: 1553 VGNWEDAMRFYFEMHQNGIHPDYLTHKALL 1582
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 87/356 (24%), Positives = 168/356 (47%), Gaps = 9/356 (2%)
Query: 122 MNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQS--SGPRPSALTYQIILKLFVEA 179
M + G PS+V++ L++++ + GR + + M++ SG P+ +TY +++
Sbjct: 1110 MLELGIEPSIVTYNTLLDSFLKEGRKDKVAMLLKEMETRGSGCLPNDVTYNVVITGLTRK 1169
Query: 180 NKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQST 239
+EA E L++ + K ++ +I G +K L M G+ +
Sbjct: 1170 GDLEEAAE----LVEGMRLSKKASSFTYNPLITGLLARGCVKKVYDLQLEMENEGIMPTV 1225
Query: 240 VTYNSLMS--FETNYKEVSKI-YDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEE 296
VTYN+++ ++ E +++ + +M+ GL PDV++Y L+N Y KA +EAL +F +
Sbjct: 1226 VTYNAMIHGLLQSGLVEAAQVKFAEMRAMGLLPDVITYNSLLNGYCKAGNLKEALLLFGD 1285
Query: 297 MLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASD 356
+ AG+ PT YNIL+D + G +++AR + + M C P++C+YT ++ +N
Sbjct: 1286 LRRAGLAPTVLTYNILIDGYCRLGDLEEARILKEEMGEQGCLPNVCTYTILMKGSLNVRS 1345
Query: 357 MEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTT 416
+ A +FF + G P+ Y T I + ++ + E+ + + + GI + +
Sbjct: 1346 LAMAREFFDEMLSKGLQPDCFAYNTRICAELILGDIARAFELREVLMLEGISSDTVTYNI 1405
Query: 417 IMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNF 472
++ K + A +M S G PD L+ EA ++ N
Sbjct: 1406 LIHGLCKTGNLKDAKELQMKMVSNGLQPDCITYTCLIHAHCERGLLREARKIFNNM 1461
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 86/323 (26%), Positives = 148/323 (45%), Gaps = 6/323 (1%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
L+ Y K G+ +A + + + G AP+V+++ L++ Y R G + A + M G
Sbjct: 1266 LLNGYCKAGNLKEALLLFGDLRRAGLAPTVLTYNILIDGYCRLGDLEEARILKEEMGEQG 1325
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
P+ TY I++K + A E F +L + L+PD ++ I G
Sbjct: 1326 CLPNVCTYTILMKGSLNVRSLAMAREFFDEMLSKG---LQPDCFAYNTRICAELILGDIA 1382
Query: 222 KARKLFALMAERGVQQSTVTYNSL---MSFETNYKEVSKIYDQMQRAGLQPDVVSYALLI 278
+A +L ++ G+ TVTYN L + N K+ ++ +M GLQPD ++Y LI
Sbjct: 1383 RAFELREVLMLEGISSDTVTYNILIHGLCKTGNLKDAKELQMKMVSNGLQPDCITYTCLI 1442
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCS 338
+A+ + EA +F M+ G+ P+ + +++ A+ G + A F+ M +
Sbjct: 1443 HAHCERGLLREARKIFNNMISDGLLPSAVTFTVIIHAYCRRGNLYSAYGWFRKMLEEGVE 1502
Query: 339 PDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEI 398
P+ +Y ++ A + A F + + G V N TY LI G KV N E M
Sbjct: 1503 PNEITYNVLIHALCRMGRTQLASHHFHEMLERGLVANKYTYTLLIDGNCKVGNWEDAMRF 1562
Query: 399 YDKMRVNGIKPNQTIFTTIMDAY 421
Y +M NGI P+ ++ +
Sbjct: 1563 YFEMHQNGIHPDYLTHKALLKGF 1585
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 56/266 (21%), Positives = 117/266 (43%), Gaps = 39/266 (14%)
Query: 227 FALMAERGVQQSTVTYNSLMSF---ETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGK 283
F MA GV N ++ + ++ ++++M G++P +V+Y L++++ K
Sbjct: 1072 FREMASHGVAPDVKDCNRVLRVLRDAARWDDICAVHEEMLELGIEPSIVTYNTLLDSFLK 1131
Query: 284 ARREEEALAVFEEM--LDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDR----- 336
R+++ + +EM +G P YN+++ G +++A + + MR +
Sbjct: 1132 EGRKDKVAMLLKEMETRGSGCLPNDVTYNVVITGLTRKGDLEEAAELVEGMRLSKKASSF 1191
Query: 337 -------------CS----------------PDICSYTTMLSAYVNASDMEGAEKFFRRL 367
C P + +Y M+ + + +E A+ F +
Sbjct: 1192 TYNPLITGLLARGCVKKVYDLQLEMENEGIMPTVVTYNAMIHGLLQSGLVEAAQVKFAEM 1251
Query: 368 KQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDF 427
+ G +P+VITY +L+ GY K NL++ + ++ +R G+ P + ++D Y + D
Sbjct: 1252 RAMGLLPDVITYNSLLNGYCKAGNLKEALLLFGDLRRAGLAPTVLTYNILIDGYCRLGDL 1311
Query: 428 DSAVVWYKEMESCGFPPDQKAKNILL 453
+ A + +EM G P+ IL+
Sbjct: 1312 EEARILKEEMGEQGCLPNVCTYTILM 1337
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 62/235 (26%), Positives = 104/235 (44%), Gaps = 7/235 (2%)
Query: 259 YDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAI 318
+ +M G+ PDV ++ A R ++ AV EEML+ G+ P+ YN LLD+F
Sbjct: 1072 FREMASHGVAPDVKDCNRVLRVLRDAARWDDICAVHEEMLELGIEPSIVTYNTLLDSFLK 1131
Query: 319 SGMVDQARTVFKCM--RRDRCSPDICSYTTMLSAYVNASDMEGAEKFFR--RLKQDGFVP 374
G D+ + K M R C P+ +Y +++ D+E A + RL +
Sbjct: 1132 EGRKDKVAMLLKEMETRGSGCLPNDVTYNVVITGLTRKGDLEEAAELVEGMRLSKKA--- 1188
Query: 375 NVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWY 434
+ TY LI G ++K+ ++ +M GI P + ++ ++ ++A V +
Sbjct: 1189 SSFTYNPLITGLLARGCVKKVYDLQLEMENEGIMPTVVTYNAMIHGLLQSGLVEAAQVKF 1248
Query: 435 KEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGINGLSISVD 489
EM + G PD N LL+ A EA L G+ P + +I +D
Sbjct: 1249 AEMRAMGLLPDVITYNSLLNGYCKAGNLKEALLLFGDLRRAGLAPTVLTYNILID 1303
>gi|32489924|emb|CAE05516.1| OSJNBa0038P21.9 [Oryza sativa Japonica Group]
Length = 825
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 92/329 (27%), Positives = 164/329 (49%), Gaps = 9/329 (2%)
Query: 150 AEAIFRRM-QSSGPR--PSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKM 206
A +F+RM + + P P+ TY I++ + A + VF LL ++ L PD
Sbjct: 170 AVELFKRMDRCACPEAAPTIYTYNILINCYRRARRPDLGLPVFGRLL---RTGLGPDVFS 226
Query: 207 FHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSK---IYDQMQ 263
++ +I + K G +KA LF M E+G+ + VTY+SL++ KE+ K + QM
Sbjct: 227 YNALIDGFSKEGEVDKAHDLFYKMEEQGIMPNVVTYSSLINGLCKTKEMDKAERVLRQMV 286
Query: 264 RAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVD 323
AG++P+ ++Y LI+ Y + +E++ VF+EM + + P N + A G +
Sbjct: 287 GAGVRPNNMTYNCLIHGYSTSGMWKESVRVFKEMSSSLLVPDVGNCNSFMTALCKHGRIK 346
Query: 324 QARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLI 383
+AR +F M PD+ SY +L Y A + G + F + +G VP+ + TLI
Sbjct: 347 EARDIFDSMVLKGPKPDVISYGALLHGYATAGCIAGMDNLFNVMVCEGVVPDRHVFNTLI 406
Query: 384 KGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFP 443
YA++ ++K + +++ M G+ P+ F+T++ A+ + D A+ + M G P
Sbjct: 407 NAYARLGMMDKSLLMFEDMTKQGVNPDIITFSTVISAFCRLGRLDDAMEKFNHMIDTGVP 466
Query: 444 PDQKAKNILLSLAKTADERNEANELLGNF 472
PD + L+ + +A EL+ +
Sbjct: 467 PDTAVYSCLIQGQCNRRDLVKAKELISDM 495
Score = 135 bits (341), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 93/375 (24%), Positives = 175/375 (46%), Gaps = 42/375 (11%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
LI + K+G+ +KA + M ++G P+VV++++L+ + AE + R+M +G
Sbjct: 230 LIDGFSKEGEVDKAHDLFYKMEEQGIMPNVVTYSSLINGLCKTKEMDKAERVLRQMVGAG 289
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
RP+ +TY ++ + + +KE+ VF + S L PD + + K G +
Sbjct: 290 VRPNNMTYNCLIHGYSTSGMWKESVRVFKEM---SSSLLVPDVGNCNSFMTALCKHGRIK 346
Query: 222 KARKLFALMAERGVQQSTVTYNSLMSFETNYKEVS---KIYDQMQRAGLQPDVVSYALLI 278
+AR +F M +G + ++Y +L+ ++ +++ M G+ PD + LI
Sbjct: 347 EARDIFDSMVLKGPKPDVISYGALLHGYATAGCIAGMDNLFNVMVCEGVVPDRHVFNTLI 406
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCS 338
NAY + +++L +FE+M GV P ++ ++ AF G +D A F M
Sbjct: 407 NAYARLGMMDKSLLMFEDMTKQGVNPDIITFSTVISAFCRLGRLDDAMEKFNHMIDTGVP 466
Query: 339 PDICSYTTMLSAYVNASDMEGAE----------------KFF----RRLKQDGFV----- 373
PD Y+ ++ N D+ A+ KFF L ++G V
Sbjct: 467 PDTAVYSCLIQGQCNRRDLVKAKELISDMLSKGIPPPCIKFFTSIINNLCKEGRVAEGKD 526
Query: 374 -----------PNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYG 422
PN+IT+ +L+ GY V N+++ + + D M G++P+ + T++D Y
Sbjct: 527 VVDLIIHTGQRPNLITFNSLVDGYCLVGNMKEAVGLLDSMESVGVEPDIYTYNTLVDGYC 586
Query: 423 KNKDFDSAVVWYKEM 437
K+ D A+ +++M
Sbjct: 587 KHGRIDDALTLFRDM 601
Score = 135 bits (339), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 93/392 (23%), Positives = 172/392 (43%), Gaps = 42/392 (10%)
Query: 101 MLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSS 160
+LI Y + + V + + G P V S+ AL++ + + G A +F +M+
Sbjct: 194 ILINCYRRARRPDLGLPVFGRLLRTGLGPDVFSYNALIDGFSKEGEVDKAHDLFYKMEEQ 253
Query: 161 GPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGY 220
G P+ +TY ++ + + +AE V ++ + ++P+ ++ +I+ Y +G +
Sbjct: 254 GIMPNVVTYSSLINGLCKTKEMDKAERVLRQMVG---AGVRPNNMTYNCLIHGYSTSGMW 310
Query: 221 EKARKLFALMAERGVQQSTVTYNSLMSFETNY---KEVSKIYDQMQRAGLQPDVVSYALL 277
+++ ++F M+ + NS M+ + KE I+D M G +PDV+SY L
Sbjct: 311 KESVRVFKEMSSSLLVPDVGNCNSFMTALCKHGRIKEARDIFDSMVLKGPKPDVISYGAL 370
Query: 278 INAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRC 337
++ Y A +F M+ GV P +N L++A+A GM+D++ +F+ M +
Sbjct: 371 LHGYATAGCIAGMDNLFNVMVCEGVVPDRHVFNTLINAYARLGMMDKSLLMFEDMTKQGV 430
Query: 338 SPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMME 397
+PDI +++T++SA+ ++ A + F + G P+ Y LI+G +L K E
Sbjct: 431 NPDIITFSTVISAFCRLGRLDDAMEKFNHMIDTGVPPDTAVYSCLIQGQCNRRDLVKAKE 490
Query: 398 IYDKMRVNGI------------------------------------KPNQTIFTTIMDAY 421
+ M GI +PN F +++D Y
Sbjct: 491 LISDMLSKGIPPPCIKFFTSIINNLCKEGRVAEGKDVVDLIIHTGQRPNLITFNSLVDGY 550
Query: 422 GKNKDFDSAVVWYKEMESCGFPPDQKAKNILL 453
+ AV MES G PD N L+
Sbjct: 551 CLVGNMKEAVGLLDSMESVGVEPDIYTYNTLV 582
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 75/276 (27%), Positives = 141/276 (51%), Gaps = 6/276 (2%)
Query: 202 PDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSKIYD- 260
P ++++I Y++A + +F + G+ +YN+L+ + EV K +D
Sbjct: 187 PTIYTYNILINCYRRARRPDLGLPVFGRLLRTGLGPDVFSYNALIDGFSKEGEVDKAHDL 246
Query: 261 --QMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAI 318
+M+ G+ P+VV+Y+ LIN K + ++A V +M+ AGVRP + YN L+ ++
Sbjct: 247 FYKMEEQGIMPNVVTYSSLINGLCKTKEMDKAERVLRQMVGAGVRPNNMTYNCLIHGYST 306
Query: 319 SGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVIT 378
SGM ++ VFK M PD+ + + ++A ++ A F + G P+VI+
Sbjct: 307 SGMWKESVRVFKEMSSSLLVPDVGNCNSFMTALCKHGRIKEARDIFDSMVLKGPKPDVIS 366
Query: 379 YGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEME 438
YG L+ GYA + M +++ M G+ P++ +F T+++AY + D +++ +++M
Sbjct: 367 YGALLHGYATAGCIAGMDNLFNVMVCEGVVPDRHVFNTLINAYARLGMMDKSLLMFEDMT 426
Query: 439 SCGFPPDQKAKNILLSLAKTADERNEANELLGNFNH 474
G PD + ++S ++A E FNH
Sbjct: 427 KQGVNPDIITFSTVISAFCRLGRLDDAME---KFNH 459
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 77/320 (24%), Positives = 152/320 (47%), Gaps = 6/320 (1%)
Query: 128 APSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEE 187
AP++ ++ L+ Y R R +F R+ +G P +Y ++ F + + +A +
Sbjct: 186 APTIYTYNILINCYRRARRPDLGLPVFGRLLRTGLGPDVFSYNALIDGFSKEGEVDKAHD 245
Query: 188 VFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLM- 246
+F + E+ + P+ + +I K +KA ++ M GV+ + +TYN L+
Sbjct: 246 LFYKM---EEQGIMPNVVTYSSLINGLCKTKEMDKAERVLRQMVGAGVRPNNMTYNCLIH 302
Query: 247 --SFETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRP 304
S +KE +++ +M + L PDV + + A K R +EA +F+ M+ G +P
Sbjct: 303 GYSTSGMWKESVRVFKEMSSSLLVPDVGNCNSFMTALCKHGRIKEARDIFDSMVLKGPKP 362
Query: 305 THKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFF 364
+Y LL +A +G + +F M + PD + T+++AY M+ + F
Sbjct: 363 DVISYGALLHGYATAGCIAGMDNLFNVMVCEGVVPDRHVFNTLINAYARLGMMDKSLLMF 422
Query: 365 RRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKN 424
+ + G P++IT+ T+I + ++ L+ ME ++ M G+ P+ +++ ++
Sbjct: 423 EDMTKQGVNPDIITFSTVISAFCRLGRLDDAMEKFNHMIDTGVPPDTAVYSCLIQGQCNR 482
Query: 425 KDFDSAVVWYKEMESCGFPP 444
+D A +M S G PP
Sbjct: 483 RDLVKAKELISDMLSKGIPP 502
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 88/378 (23%), Positives = 167/378 (44%), Gaps = 5/378 (1%)
Query: 99 FLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQ 158
F LI AY + G +K+ + M K+G P +++ + ++ A+ R GR +A F M
Sbjct: 402 FNTLINAYARLGMMDKSLLMFEDMTKQGVNPDIITFSTVISAFCRLGRLDDAMEKFNHMI 461
Query: 159 SSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAG 218
+G P Y +++ +A+E+ +L + P P K F +I K G
Sbjct: 462 DTGVPPDTAVYSCLIQGQCNRRDLVKAKELISDMLSKGIPP--PCIKFFTSIINNLCKEG 519
Query: 219 GYEKARKLFALMAERGVQQSTVTYNSLM---SFETNYKEVSKIYDQMQRAGLQPDVVSYA 275
+ + + L+ G + + +T+NSL+ N KE + D M+ G++PD+ +Y
Sbjct: 520 RVAEGKDVVDLIIHTGQRPNLITFNSLVDGYCLVGNMKEAVGLLDSMESVGVEPDIYTYN 579
Query: 276 LLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRD 335
L++ Y K R ++AL +F +ML V T +YNI+L + A+ +F M
Sbjct: 580 TLVDGYCKHGRIDDALTLFRDMLHKRVTLTSVSYNIILHGLFQARRTIVAKEMFHEMIES 639
Query: 336 RCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKM 395
+ I +Y T+L + + A +L +++T+ +I+ KV ++
Sbjct: 640 GMAVSIHTYATVLGGLCRNNCTDEANMLLEKLFSMNVKFDILTFNIVIRAMFKVGRRQEA 699
Query: 396 MEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSL 455
E++ + G+ P + ++ K + F+ A + ME PD + N ++ +
Sbjct: 700 KELFAAISTYGLVPTILTYRVMITNLIKEESFEDADNLFSSMEKSSCTPDSRILNEIIRM 759
Query: 456 AKTADERNEANELLGNFN 473
E +A L +
Sbjct: 760 LLNKGEVAKAGNYLSKID 777
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 78/383 (20%), Positives = 158/383 (41%), Gaps = 9/383 (2%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
L+ Y G + + + M +G P L+ AY R G + +F M G
Sbjct: 370 LLHGYATAGCIAGMDNLFNVMVCEGVVPDRHVFNTLINAYARLGMMDKSLLMFEDMTKQG 429
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
P +T+ ++ F + +A E F ++D + + PD ++ +I
Sbjct: 430 VNPDIITFSTVISAFCRLGRLDDAMEKFNHMID---TGVPPDTAVYSCLIQGQCNRRDLV 486
Query: 222 KARKLFALMAERGVQQSTVTY-----NSLMSFETNYKEVSKIYDQMQRAGLQPDVVSYAL 276
KA++L + M +G+ + + N+L E E + D + G +P+++++
Sbjct: 487 KAKELISDMLSKGIPPPCIKFFTSIINNLCK-EGRVAEGKDVVDLIIHTGQRPNLITFNS 545
Query: 277 LINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDR 336
L++ Y +EA+ + + M GV P YN L+D + G +D A T+F+ M R
Sbjct: 546 LVDGYCLVGNMKEAVGLLDSMESVGVEPDIYTYNTLVDGYCKHGRIDDALTLFRDMLHKR 605
Query: 337 CSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMM 396
+ SY +L A A++ F + + G ++ TY T++ G + N ++
Sbjct: 606 VTLTSVSYNIILHGLFQARRTIVAKEMFHEMIESGMAVSIHTYATVLGGLCRNNCTDEAN 665
Query: 397 EIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLA 456
+ +K+ +K + F ++ A K A + + + G P ++++
Sbjct: 666 MLLEKLFSMNVKFDILTFNIVIRAMFKVGRRQEAKELFAAISTYGLVPTILTYRVMITNL 725
Query: 457 KTADERNEANELLGNFNHPNNEP 479
+ +A+ L + + P
Sbjct: 726 IKEESFEDADNLFSSMEKSSCTP 748
Score = 75.1 bits (183), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 63/301 (20%), Positives = 122/301 (40%), Gaps = 41/301 (13%)
Query: 86 LRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGG 145
L I + N + F L+ Y G+ +A +L M G P + ++ L++ Y + G
Sbjct: 530 LIIHTGQRPNLITFNSLVDGYCLVGNMKEAVGLLDSMESVGVEPDIYTYNTLVDGYCKHG 589
Query: 146 RYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQK 205
R +A +FR M ++++Y IIL +A + A+E
Sbjct: 590 RIDDALTLFRDMLHKRVTLTSVSYNIILHGLFQARRTIVAKE------------------ 631
Query: 206 MFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSL---MSFETNYKEVSKIYDQM 262
MFH MI E G+ S TY ++ + E + + +++
Sbjct: 632 MFHEMI--------------------ESGMAVSIHTYATVLGGLCRNNCTDEANMLLEKL 671
Query: 263 QRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMV 322
++ D++++ ++I A K R +EA +F + G+ PT Y +++
Sbjct: 672 FSMNVKFDILTFNIVIRAMFKVGRRQEAKELFAAISTYGLVPTILTYRVMITNLIKEESF 731
Query: 323 DQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTL 382
+ A +F M + C+PD ++ +N ++ A + ++ + G +P T L
Sbjct: 732 EDADNLFSSMEKSSCTPDSRILNEIIRMLLNKGEVAKAGNYLSKIDKKGILPEATTTSLL 791
Query: 383 I 383
I
Sbjct: 792 I 792
>gi|449446855|ref|XP_004141186.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g55840-like [Cucumis sativus]
Length = 1079
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 103/471 (21%), Positives = 203/471 (43%), Gaps = 50/471 (10%)
Query: 41 VGSAVAVLRSERTRG-QP--LPKDLVLGTLVR-LKQLKKWNVVSEVLEWLRIQSWWDFNE 96
VG AV S RG +P ++++ ++V+ + W+ ++L + FN
Sbjct: 121 VGHAVNTFSSMLIRGFKPSVYTCNMIMASMVKNCRAHLVWSFFKQMLTSRVCPNVSSFN- 179
Query: 97 MDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRR 156
+LI+ QG KA +L+ M + GY P++VS+ L+ + GR+K A +
Sbjct: 180 ----ILISVLCVQGKLKKAVNILTMMERNGYVPTIVSYNTLLSWCCKKGRFKFALVLIHH 235
Query: 157 MQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKK 216
M+ G + TY + + ++ + + ++ L + P++ ++ +I + K
Sbjct: 236 MECKGIQADVCTYNMFIDSLCRNSR---SAQGYLVLKKMRNKMITPNEVSYNTLINGFVK 292
Query: 217 AGGYEKARKLFALMAERGVQQSTVTYNSLM---SFETNYKEVSKIYDQMQRAGLQPDVVS 273
G A ++F M E + + +TYN L+ N++E ++ D M+ ++P+ V+
Sbjct: 293 EGKIGVATRVFNEMIELNLSPNLITYNILINGYCINGNFEEALRVLDVMEANDVRPNEVT 352
Query: 274 YALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMR 333
L+N K+ + + A + E ++ +++D +G++D+A + M
Sbjct: 353 IGTLLNGLYKSAKFDVARNILERYCINRTSLNCISHTVMIDGLCRNGLLDEAFQLLIEMC 412
Query: 334 RDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLE 393
+D PDI +++ +++ + ++ A++ ++ ++GFVPN + + TLI KV N+
Sbjct: 413 KDGVHPDIITFSVLINGFCKVGNINKAKEVMSKIYREGFVPNNVIFSTLIYNSCKVGNVY 472
Query: 394 KMMEIYDKMRVNG-----------------------------------IKPNQTIFTTIM 418
+ M+ Y M +NG + PN F I+
Sbjct: 473 EAMKFYAAMNLNGQNADNFTCNSLVASLCENGKLVEAEEFLHHISRIGLVPNSVTFDCII 532
Query: 419 DAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELL 469
+ Y D A + M SCG P LL + EA +LL
Sbjct: 533 NGYANVGDGSGAFSVFDRMISCGHHPSPFTYGSLLKVLCKGQNFWEARKLL 583
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 99/409 (24%), Positives = 170/409 (41%), Gaps = 32/409 (7%)
Query: 97 MDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRR 156
+ F +LI + K G+ NKA++V+S + ++G+ P+ V + L+ + G A +
Sbjct: 421 ITFSVLINGFCKVGNINKAKEVMSKIYREGFVPNNVIFSTLIYNSCKVGNVYEAMKFYAA 480
Query: 157 MQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKK 216
M +G T ++ E K EAEE + + L P+ F +I Y
Sbjct: 481 MNLNGQNADNFTCNSLVASLCENGKLVEAEEFLHHI---SRIGLVPNSVTFDCIINGYAN 537
Query: 217 AGGYEKARKLFALMAERGVQQSTVTYNSLMSFET---NYKEVSKIYDQMQRAGLQPDVVS 273
G A +F M G S TY SL+ N+ E K+ ++ L D +S
Sbjct: 538 VGDGSGAFSVFDRMISCGHHPSPFTYGSLLKVLCKGQNFWEARKLLKKLHCIPLAVDTIS 597
Query: 274 YALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVF---- 329
Y LI K+ EA+ +FEEM+ + P Y +L SG++ + R V
Sbjct: 598 YNTLIVEISKSGNLLEAVRLFEEMIQNNILPDSYTYTCIL-----SGLIREGRLVCAFIF 652
Query: 330 --KCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYA 387
+ M+++ + + YT + A + A F+ +++ G ++I ++ GY+
Sbjct: 653 LGRLMQKEILTLNSIVYTCFIDGLFKAGQSKAALYLFKEMEEKGLSLDLIALNSITDGYS 712
Query: 388 KVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQK 447
++ + + K R + PN T F ++ Y + +D S Y M GF P++
Sbjct: 713 RMGKVFSASSLISKTRNKNVIPNLTTFNILLHGYSRGQDIMSCFKLYNLMRRSGFFPNRL 772
Query: 448 AKNILLSLAKTADERNEANELLGNFNHPNNEPGINGLSISVDEEDDDDD 496
+ L +LG NH E GI L + + E DD
Sbjct: 773 TYHSL---------------ILGLCNHGMLELGIKMLKMFIAESSTIDD 806
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 82/353 (23%), Positives = 149/353 (42%), Gaps = 27/353 (7%)
Query: 83 LEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYG 142
L+W+ Q + N + ++ IT + VL GYA S++ H A
Sbjct: 39 LKWVIKQPGLEPNHLTHILGITTH-----------VLVKARLYGYAKSILKHLA------ 81
Query: 143 RGGRYKNAEAIFRRMQSSGPRPSA--LTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPL 200
+ + +F + + P S+ + +++++++ A F ++L
Sbjct: 82 --QKNSGSNFLFGVLMDTYPLCSSNPAVFDLLIRVYLRQGMVGHAVNTFSSMLIR---GF 136
Query: 201 KPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSF---ETNYKEVSK 257
KP +M++ K F M V + ++N L+S + K+
Sbjct: 137 KPSVYTCNMIMASMVKNCRAHLVWSFFKQMLTSRVCPNVSSFNILISVLCVQGKLKKAVN 196
Query: 258 IYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFA 317
I M+R G P +VSY L++ K R + AL + M G++ YN+ +D+
Sbjct: 197 ILTMMERNGYVPTIVSYNTLLSWCCKKGRFKFALVLIHHMECKGIQADVCTYNMFIDSLC 256
Query: 318 ISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVI 377
+ Q V K MR +P+ SY T+++ +V + A + F + + PN+I
Sbjct: 257 RNSRSAQGYLVLKKMRNKMITPNEVSYNTLINGFVKEGKIGVATRVFNEMIELNLSPNLI 316
Query: 378 TYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSA 430
TY LI GY N E+ + + D M N ++PN+ T+++ K+ FD A
Sbjct: 317 TYNILINGYCINGNFEEALRVLDVMEANDVRPNEVTIGTLLNGLYKSAKFDVA 369
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 69/286 (24%), Positives = 125/286 (43%), Gaps = 7/286 (2%)
Query: 179 ANKFKEAEEVFMTLLDEEKSPL-KPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQ 237
A K + +F L+D PL + +F ++I +Y + G A F+ M RG +
Sbjct: 81 AQKNSGSNFLFGVLMDTY--PLCSSNPAVFDLLIRVYLRQGMVGHAVNTFSSMLIRGFKP 138
Query: 238 STVTYNSLM-SFETNYKE--VSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVF 294
S T N +M S N + V + QM + + P+V S+ +LI+ + ++A+ +
Sbjct: 139 SVYTCNMIMASMVKNCRAHLVWSFFKQMLTSRVCPNVSSFNILISVLCVQGKLKKAVNIL 198
Query: 295 EEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNA 354
M G PT +YN LL G A + M D+C+Y + +
Sbjct: 199 TMMERNGYVPTIVSYNTLLSWCCKKGRFKFALVLIHHMECKGIQADVCTYNMFIDSLCRN 258
Query: 355 SDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIF 414
S ++++ PN ++Y TLI G+ K + ++++M + PN +
Sbjct: 259 SRSAQGYLVLKKMRNKMITPNEVSYNTLINGFVKEGKIGVATRVFNEMIELNLSPNLITY 318
Query: 415 TTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLS-LAKTA 459
+++ Y N +F+ A+ ME+ P++ LL+ L K+A
Sbjct: 319 NILINGYCINGNFEEALRVLDVMEANDVRPNEVTIGTLLNGLYKSA 364
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 66/307 (21%), Positives = 119/307 (38%), Gaps = 28/307 (9%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N F +L+ Y + D K+ + M + G+ P+ +++ +L+ G + +
Sbjct: 735 NLTTFNILLHGYSRGQDIMSCFKLYNLMRRSGFFPNRLTYHSLILGLCNHGMLELGIKML 794
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEA------EEVFMTLLDEEKSPLKPD----- 203
+ + LT+ ++++ E N + EVF LD++ D
Sbjct: 795 KMFIAESSTIDDLTFNMLIRKCCEINDLDKVIDLTHNMEVFRVSLDKDTQKAVTDVLVRR 854
Query: 204 ---QKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSKIYD 260
Q F M M KK G+ K + M +R M + + K+ D
Sbjct: 855 MVSQNYFVFMHEMLKK--GFIPTSKQYCTMMKR------------MCRVGDIQGAFKLKD 900
Query: 261 QMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISG 320
QM G+ D + ++ + EEA+ + + ML PT + L+ F
Sbjct: 901 QMVALGISLDDAAECAMVRGLALCGKIEEAMWILQRMLRMKKIPTTSTFTTLMHVFCKKD 960
Query: 321 MVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYG 380
+A + M R DI +Y ++SA D+ A F+ +KQ G +PN+ TY
Sbjct: 961 NFKEAHNLKILMEHYRVKLDIVAYNVLISACCANGDVITALDFYEEIKQKGLLPNMTTYR 1020
Query: 381 TLIKGYA 387
L+ +
Sbjct: 1021 VLVSAIS 1027
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 86/478 (17%), Positives = 184/478 (38%), Gaps = 25/478 (5%)
Query: 7 RKFMQKRRKVEVFKDAADEAGKKNWRRLMNQIEEVGSAVAVLR--SERTRGQPLPKD--- 61
RK ++K + + D + L+ +I + G+ + +R E + LP
Sbjct: 580 RKLLKKLHCIPLAVDTIS------YNTLIVEISKSGNLLEAVRLFEEMIQNNILPDSYTY 633
Query: 62 -LVLGTLVRLKQLKKWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLS 120
+L L+R +L + L L + N + + I K G A +
Sbjct: 634 TCILSGLIREGRLVCAFIF---LGRLMQKEILTLNSIVYTCFIDGLFKAGQSKAALYLFK 690
Query: 121 FMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEAN 180
M +KG + +++ ++ + Y R G+ +A ++ + ++ P+ T+ I+L +
Sbjct: 691 EMEEKGLSLDLIALNSITDGYSRMGKVFSASSLISKTRNKNVIPNLTTFNILLHGYSRGQ 750
Query: 181 KFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTV 240
+++ + +S P++ +H +I G E K+ + +
Sbjct: 751 DIMSCFKLYNLM---RRSGFFPNRLTYHSLILGLCNHGMLELGIKMLKMFIAESSTIDDL 807
Query: 241 TYNSLMSFETNYKEVSKIYD-----QMQRAGLQPDVVSYALLINAYGKARREEEALAVFE 295
T+N L+ ++ K+ D ++ R L D + + + + +
Sbjct: 808 TFNMLIRKCCEINDLDKVIDLTHNMEVFRVSLDKD--TQKAVTDVLVRRMVSQNYFVFMH 865
Query: 296 EMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNAS 355
EML G PT K Y ++ G + A + M S D + M+
Sbjct: 866 EMLKKGFIPTSKQYCTMMKRMCRVGDIQGAFKLKDQMVALGISLDDAAECAMVRGLALCG 925
Query: 356 DMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFT 415
+E A +R+ + +P T+ TL+ + K +N ++ + M +K + +
Sbjct: 926 KIEEAMWILQRMLRMKKIPTTSTFTTLMHVFCKKDNFKEAHNLKILMEHYRVKLDIVAYN 985
Query: 416 TIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFN 473
++ A N D +A+ +Y+E++ G P+ +L+S T + +L + N
Sbjct: 986 VLISACCANGDVITALDFYEEIKQKGLLPNMTTYRVLVSAISTKHYVSRGEIVLKDLN 1043
>gi|116309556|emb|CAH66618.1| OSIGBa0144C23.4 [Oryza sativa Indica Group]
Length = 845
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 98/405 (24%), Positives = 196/405 (48%), Gaps = 14/405 (3%)
Query: 58 LPKDLVLGTLVR-LKQLKKWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAE 116
LPK L+ ++++ L ++K+ + +++ + + S + + ++I K +KAE
Sbjct: 242 LPKILICNSIIKELCKMKEMDKAESIVQKM-VDSGIAPDLFTYSLIIDGLCKSKAMDKAE 300
Query: 117 KVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLF 176
+VL M + G P+ +++ +L+ Y G + + +F++M S G P+ +
Sbjct: 301 RVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQMSSCGVIPTVDNCNSFIHAL 360
Query: 177 VEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHM----MIYMYKKAGGYEKARKLFALMAE 232
+ + EA+ +F +++ K P KPD + + Y Y + +F LM
Sbjct: 361 FKHGRTNEAKCIFDSMV--LKGP-KPDIISYSTNASWVCYWYVTV-VWVMWHNIFNLMLT 416
Query: 233 RGVQQSTVTYNSLMSFETNYKEVSK---IYDQMQRAGLQPDVVSYALLINAYGKARREEE 289
+G+ + +N L++ + K I++ MQ G+ PD V++A +I++ + R ++
Sbjct: 417 KGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDD 476
Query: 290 ALAVFEEMLDAGVRPTHKAYNILLDAFAISG-MVDQARTVFKCMRRDRCSPDICSYTTML 348
AL F M+D GV P+ Y L+ G +V + + M +D P + +++++
Sbjct: 477 ALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSII 536
Query: 349 SAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIK 408
+ + + + Q G PNV+T+ +L++GY V N+E+ + D M GI+
Sbjct: 537 NNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIE 596
Query: 409 PNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILL 453
PN I+ T++D Y KN D A+ +++M G P +I+L
Sbjct: 597 PNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIIL 641
Score = 132 bits (333), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 94/376 (25%), Positives = 170/376 (45%), Gaps = 9/376 (2%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N+ F +LI AY + G +KA + M KG P V+ ++ + R GR +A F
Sbjct: 422 NKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHKF 481
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
M G PS Y +++ + +A+E+ +++++ P P K F +I
Sbjct: 482 NHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPP--PGVKYFSSIINNL 539
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSLM---SFETNYKEVSKIYDQMQRAGLQPDV 271
K G + + + +M + G + + VT+NSLM N +E + D M G++P+
Sbjct: 540 CKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNC 599
Query: 272 VSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKC 331
Y L++ Y K R ++AL VF +ML GV+PT Y+I+L + A+ +F
Sbjct: 600 YIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTAAKKMFHE 659
Query: 332 MRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNN 391
M + I +Y +L + + A +L ++IT+ +I KV
Sbjct: 660 MIESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISAMFKVGR 719
Query: 392 LEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKN- 450
++ E++D + G+ PN ++ ++ K + ++ A + +E G D + N
Sbjct: 720 RQEAKELFDAISTYGLVPNIQTYSMMITNLIKEESYEEADNLFISVEKSGHASDSRLLNH 779
Query: 451 ---ILLSLAKTADERN 463
+LL+ A+ A N
Sbjct: 780 IVRMLLNKAEVAKASN 795
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 93/333 (27%), Positives = 165/333 (49%), Gaps = 19/333 (5%)
Query: 153 IFRRM-QSSGPR---PSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFH 208
+F+RM + + PR P+ TY I++ + ++ + LL K+ L PD +
Sbjct: 159 LFKRMDRWACPRHSPPTIHTYNILIDCYRRVHRPDLGLAIVGRLL---KNGLGPDDFSYS 215
Query: 209 MMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSK---IYDQMQRA 265
+ IY + K G +KA LF M E+GV + NS++ KE+ K I +M +
Sbjct: 216 L-IYGFVKDGEVDKAHCLFLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDS 274
Query: 266 GLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQA 325
G+ PD+ +Y+L+I+ K++ ++A V E+M++AG RP YN L+ ++ISGM +++
Sbjct: 275 GIAPDLFTYSLIIDGLCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNES 334
Query: 326 RTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIK- 384
VFK M P + + + + A A+ F + G P++I+Y T
Sbjct: 335 VRVFKQMSSCGVIPTVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTNASW 394
Query: 385 -GYAKVNNLEKMME-IYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGF 442
Y V + M I++ M GI PN+ +F +++AY + D A++ +++M++ G
Sbjct: 395 VCYWYVTVVWVMWHNIFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGM 454
Query: 443 PPDQKA-KNILLSLAKTADERNEANELLGNFNH 474
PD ++ SL + ++ L FNH
Sbjct: 455 IPDTVTFATVISSLCRIG----RLDDALHKFNH 483
Score = 114 bits (286), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 83/358 (23%), Positives = 152/358 (42%), Gaps = 7/358 (1%)
Query: 116 EKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKL 175
+ + M KG AP+ L+ AY R G A IF MQ+ G P +T+ ++
Sbjct: 408 HNIFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISS 467
Query: 176 FVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGV 235
+ +A F ++D + P + ++ +I G KA++L + M + +
Sbjct: 468 LCRIGRLDDALHKFNHMVD---IGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDI 524
Query: 236 QQSTVTYNSL----MSFETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEAL 291
V Y S + E E I D M + G +P+VV++ L+ Y EEA
Sbjct: 525 PPPGVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAF 584
Query: 292 AVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAY 351
A+ + M G+ P Y L+D + +G +D A TVF+ M P Y+ +L
Sbjct: 585 ALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGL 644
Query: 352 VNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQ 411
A A+K F + + G ++ TYG ++ G + N ++ + +K+ +K +
Sbjct: 645 FQARRTTAAKKMFHEMIESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDI 704
Query: 412 TIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELL 469
F ++ A K A + + + G P+ + +++++ + EA+ L
Sbjct: 705 ITFNIVISAMFKVGRRQEAKELFDAISTYGLVPNIQTYSMMITNLIKEESYEEADNLF 762
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 101/501 (20%), Positives = 200/501 (39%), Gaps = 53/501 (10%)
Query: 61 DLVLGTLVRLKQLKKWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLS 120
L++ L + K + K VLE + +++ N + + LI Y G +N++ +V
Sbjct: 284 SLIIDGLCKSKAMDK---AERVLEQM-VEAGTRPNSITYNSLIHGYSISGMWNESVRVFK 339
Query: 121 FMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQI----ILKLF 176
M+ G P+V + + + A + GR A+ IF M GP+P ++Y + +
Sbjct: 340 QMSSCGVIPTVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTNASWVCYWY 399
Query: 177 VEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQ 236
V + +F +L + + P++ +F+++I Y + G +KA +F M +G+
Sbjct: 400 VTV-VWVMWHNIFNLMLTKG---IAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMI 455
Query: 237 QSTVT-----------------------------------YNSLMSFETNYKEVSK---- 257
TVT Y L+ N+ E+ K
Sbjct: 456 PDTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKEL 515
Query: 258 IYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFA 317
I + M + P V ++ +IN K R E + + M+ G RP +N L++ +
Sbjct: 516 ISEMMNKDIPPPGVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYC 575
Query: 318 ISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVI 377
+ G +++A + M P+ Y T++ Y ++ A FR + G P +
Sbjct: 576 LVGNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSV 635
Query: 378 TYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEM 437
Y ++ G + +++ +M +G + + ++ +N D A + +++
Sbjct: 636 LYSIILHGLFQARRTTAAKKMFHEMIESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKL 695
Query: 438 ESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGINGLSISVDEEDDDDDD 497
+ D NI++S R EA EL + P I S+ + ++
Sbjct: 696 FAMNVKFDIITFNIVISAMFKVGRRQEAKELFDAISTYGLVPNIQTYSMMITNLIKEESY 755
Query: 498 DEDDDDNIYHDGDGDGDGDDN 518
+E DN++ + G D+
Sbjct: 756 EE--ADNLFISVEKSGHASDS 774
>gi|297797449|ref|XP_002866609.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297312444|gb|EFH42868.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 724
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 107/463 (23%), Positives = 209/463 (45%), Gaps = 55/463 (11%)
Query: 35 MNQIEEVGSAVAVLRSERTRGQPLPKDLVLGTLVRLKQLKKWNVVSEVLEWLR------- 87
+ + EV SA++VLR + T+ +P ++ TL+ L K N V+E L+ L
Sbjct: 221 LCAVNEVDSALSVLR-DMTKHGCVPNSVIYQTLIH--SLSKCNRVNEALQLLEEMFLMGC 277
Query: 88 IQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRY 147
+ FN++ I K N+A K+++ M +G+ P +++ LM + GR
Sbjct: 278 VPDAETFNDV-----ILGLCKFDRINEAAKMVNRMLIRGFTPDDITYGYLMNGLCKIGRV 332
Query: 148 KNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFM----------------- 190
A+ +F R+ P+P+++ + ++ FV + +A+ V
Sbjct: 333 DAAKDLFYRI----PKPTSVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNS 388
Query: 191 ----------------TLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERG 234
L D KP+ + +++ + K G ++A L M+ G
Sbjct: 389 LIYGYWKKGLVGLALEVLRDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNLLNEMSADG 448
Query: 235 VQQSTVTYNSLMSF---ETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEAL 291
++ +TV +N L+S E E +I+ +M R G +PDV ++ LI+ + + AL
Sbjct: 449 LKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHAL 508
Query: 292 AVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAY 351
+ +M+ GV YN L++AF G + +AR + M D +Y +++
Sbjct: 509 WLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSLLDEITYNSLIKGL 568
Query: 352 VNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQ 411
A +++ A F ++ +DG VP+ I+ LI G + +E+ +E +M + G P+
Sbjct: 569 CRAGEVDKARSLFEKMLRDGLVPSSISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDI 628
Query: 412 TIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLS 454
F ++++ + + + ++++++ G PPD N L+S
Sbjct: 629 VTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTYNTLMS 671
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 102/379 (26%), Positives = 178/379 (46%), Gaps = 12/379 (3%)
Query: 99 FLMLITAYGKQGDFNKAEKVLS-FMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRM 157
F LI + G + A+ VLS + G P V ++ +L+ Y + G A + R M
Sbjct: 350 FNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKKGLVGLALEVLRDM 409
Query: 158 QSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKS-PLKPDQKMFHMMIYMYKK 216
++ G +P+ +Y I++ F + K EA LL+E + LKP+ F+ +I + K
Sbjct: 410 RNKGCKPNVYSYTILVDGFCKLGKIDEA----YNLLNEMSADGLKPNTVGFNCLISAFCK 465
Query: 217 AGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSK---IYDQMQRAGLQPDVVS 273
+A ++F M +G + T+NSL+S E+ + M G+ + V+
Sbjct: 466 EHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVT 525
Query: 274 YALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMR 333
Y LINA+ + +EA + EM+ G YN L+ +G VD+AR++F+ M
Sbjct: 526 YNTLINAFLRRGEIKEARKLVNEMVFQGSLLDEITYNSLIKGLCRAGEVDKARSLFEKML 585
Query: 334 RDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLE 393
RD P S +++ + +E A +F + + G P+++T+ +LI G + +E
Sbjct: 586 RDGLVPSSISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIE 645
Query: 394 KMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILL 453
+ ++ K++ GI P+ + T+M K A + E GF P+ + +ILL
Sbjct: 646 DGLTMFRKLQAEGIPPDTVTYNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNDRTWSILL 705
Query: 454 -SLA--KTADERNEANELL 469
SL +T D R N +
Sbjct: 706 QSLVPQETLDRRTFYNAVF 724
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 88/375 (23%), Positives = 164/375 (43%), Gaps = 11/375 (2%)
Query: 99 FLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQ 158
F +++ A + + A VL M K G P+ V + L+ + + R A + M
Sbjct: 214 FGVVMKALCAVNEVDSALSVLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMF 273
Query: 159 SSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAG 218
G P A T+ ++ + ++ EA ++ +L PD + ++ K G
Sbjct: 274 LMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRG---FTPDDITYGYLMNGLCKIG 330
Query: 219 GYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEV----SKIYDQMQRAGLQPDVVSY 274
+ A+ LF R + ++V +N+L+ + + + + D + G+ PDV +Y
Sbjct: 331 RVDAAKDLFY----RIPKPTSVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTY 386
Query: 275 ALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRR 334
LI Y K AL V +M + G +P +Y IL+D F G +D+A + M
Sbjct: 387 NSLIYGYWKKGLVGLALEVLRDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNLLNEMSA 446
Query: 335 DRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEK 394
D P+ + ++SA+ + A + FR + + G P+V T+ +LI G +V+ ++
Sbjct: 447 DGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKH 506
Query: 395 MMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLS 454
+ + M G+ N + T+++A+ + + A EM G D+ N L+
Sbjct: 507 ALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSLLDEITYNSLIK 566
Query: 455 LAKTADERNEANELL 469
A E ++A L
Sbjct: 567 GLCRAGEVDKARSLF 581
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 86/360 (23%), Positives = 156/360 (43%), Gaps = 13/360 (3%)
Query: 115 AEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILK 174
A V M + P++ + +M+A +A ++ R M G P+++ YQ ++
Sbjct: 195 AANVFYDMLSRKIPPTLFTFGVVMKALCAVNEVDSALSVLRDMTKHGCVPNSVIYQTLIH 254
Query: 175 LFVEANKFKEA----EEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALM 230
+ N+ EA EE+F+ PD + F+ +I K +A K+ M
Sbjct: 255 SLSKCNRVNEALQLLEEMFLM-------GCVPDAETFNDVILGLCKFDRINEAAKMVNRM 307
Query: 231 AERGVQQSTVTYNSLMSFETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEA 290
RG +TY LM+ V D R +P V + LI+ + R ++A
Sbjct: 308 LIRGFTPDDITYGYLMNGLCKIGRVDAAKDLFYRIP-KPTSVIFNTLIHGFVTHGRLDDA 366
Query: 291 LAVFEEMLDA-GVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLS 349
AV +M+ + G+ P YN L+ + G+V A V + MR C P++ SYT ++
Sbjct: 367 KAVLSDMVTSYGIVPDVCTYNSLIYGYWKKGLVGLALEVLRDMRNKGCKPNVYSYTILVD 426
Query: 350 AYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKP 409
+ ++ A + DG PN + + LI + K + + + +EI+ +M G KP
Sbjct: 427 GFCKLGKIDEAYNLLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKP 486
Query: 410 NQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELL 469
+ F +++ + + A+ ++M S G + N L++ E EA +L+
Sbjct: 487 DVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLV 546
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 92/392 (23%), Positives = 155/392 (39%), Gaps = 45/392 (11%)
Query: 94 FNEMDFLMLITAYGKQGDFNKAEKV-LSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEA 152
F E F+ ++ Y K G + ++ L N P+ S+ ++E G +K A
Sbjct: 138 FKESLFISIMRDYDKAGFPGQTTRLMLEMRNVYSCEPTFKSYNVVLEILVSGNCHKVAAN 197
Query: 153 IFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIY 212
+F M S P+ T+ +++K N E + L D K P+ ++ +I+
Sbjct: 198 VFYDMLSRKIPPTLFTFGVVMKALCAVN---EVDSALSVLRDMTKHGCVPNSVIYQTLIH 254
Query: 213 MYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNY---KEVSKIYDQMQRAGLQP 269
K +A +L M G T+N ++ + E +K+ ++M G P
Sbjct: 255 SLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFTP 314
Query: 270 DVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVF 329
D ++Y L+N K R + A +F + +PT +N L+ F G +D A+ V
Sbjct: 315 DDITYGYLMNGLCKIGRVDAAKDLFYRI----PKPTSVIFNTLIHGFVTHGRLDDAKAVL 370
Query: 330 KCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKV 389
+ M+++Y G VP+V TY +LI GY K
Sbjct: 371 ---------------SDMVTSY-------------------GIVPDVCTYNSLIYGYWKK 396
Query: 390 NNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAK 449
+ +E+ MR G KPN +T ++D + K D A EM + G P+
Sbjct: 397 GLVGLALEVLRDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNLLNEMSADGLKPNTVGF 456
Query: 450 NILLSLAKTADERNEANELLGNFNHPNNEPGI 481
N L+S EA E+ +P +
Sbjct: 457 NCLISAFCKEHRIPEAVEIFREMPRKGCKPDV 488
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 88/359 (24%), Positives = 147/359 (40%), Gaps = 46/359 (12%)
Query: 41 VGSAVAVLRSERTRGQPLPKDLVLGTLVRLKQLKKWNVVSEVLEWLRIQSWWDF--NEMD 98
VG A+ VLR R +G K V + + K + E L S N +
Sbjct: 399 VGLALEVLRDMRNKGC---KPNVYSYTILVDGFCKLGKIDEAYNLLNEMSADGLKPNTVG 455
Query: 99 FLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQ 158
F LI+A+ K+ +A ++ M +KG P V + +L+ K+A + R M
Sbjct: 456 FNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMI 515
Query: 159 SSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAG 218
S G + +TY ++ F+ + KE
Sbjct: 516 SEGVVANTVTYNTLINAFLRRGEIKE---------------------------------- 541
Query: 219 GYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSK---IYDQMQRAGLQPDVVSYA 275
ARKL M +G +TYNSL+ EV K ++++M R GL P +S
Sbjct: 542 ----ARKLVNEMVFQGSLLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGLVPSSISCN 597
Query: 276 LLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRD 335
+LIN ++ EEA+ +EM+ G P +N L++ +G ++ T+F+ ++ +
Sbjct: 598 ILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAE 657
Query: 336 RCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEK 394
PD +Y T++S + A +DGFVPN T+ L++ L++
Sbjct: 658 GIPPDTVTYNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNDRTWSILLQSLVPQETLDR 716
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 74/335 (22%), Positives = 138/335 (41%), Gaps = 14/335 (4%)
Query: 161 GPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGY 220
G R S YQ+++ +FK + + M + DE + + +F ++ Y KAG
Sbjct: 100 GYRHSFDVYQVLIGKLGSNGEFKTIDRLLMQMKDEG---IVFKESLFISIMRDYDKAGFP 156
Query: 221 EKARKLFALM-----AERGVQQSTVTYNSLMSFETNYKEVSKIYDQMQRAGLQPDVVSYA 275
+ +L M E + V L+S + + YD + R + P + ++
Sbjct: 157 GQTTRLMLEMRNVYSCEPTFKSYNVVLEILVSGNCHKVAANVFYDMLSRK-IPPTLFTFG 215
Query: 276 LLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRD 335
+++ A + AL+V +M G P Y L+ + + V++A + + M
Sbjct: 216 VVMKALCAVNEVDSALSVLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLM 275
Query: 336 RCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKM 395
C PD ++ ++ + A K R+ GF P+ ITYG L+ G K+ ++
Sbjct: 276 GCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFTPDDITYGYLMNGLCKIGRVDAA 335
Query: 396 MEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEM-ESCGFPPDQKAKNILLS 454
+++ ++ KP IF T++ + + D A +M S G PD N L+
Sbjct: 336 KDLFYRIP----KPTSVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIY 391
Query: 455 LAKTADERNEANELLGNFNHPNNEPGINGLSISVD 489
A E+L + + +P + +I VD
Sbjct: 392 GYWKKGLVGLALEVLRDMRNKGCKPNVYSYTILVD 426
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/219 (22%), Positives = 97/219 (44%), Gaps = 4/219 (1%)
Query: 231 AERGVQQSTVTYNSLMS-FETN--YKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARRE 287
+++G + S Y L+ +N +K + ++ QM+ G+ + ++ Y KA
Sbjct: 97 SQKGYRHSFDVYQVLIGKLGSNGEFKTIDRLLMQMKDEGIVFKESLFISIMRDYDKAGFP 156
Query: 288 EEALAVFEEMLDA-GVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTT 346
+ + EM + PT K+YN++L+ A VF M + P + ++
Sbjct: 157 GQTTRLMLEMRNVYSCEPTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGV 216
Query: 347 MLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNG 406
++ A ++++ A R + + G VPN + Y TLI +K N + + +++ ++M + G
Sbjct: 217 VMKALCAVNEVDSALSVLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMG 276
Query: 407 IKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPD 445
P+ F ++ K + A M GF PD
Sbjct: 277 CVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFTPD 315
>gi|222628658|gb|EEE60790.1| hypothetical protein OsJ_14375 [Oryza sativa Japonica Group]
Length = 754
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 92/328 (28%), Positives = 164/328 (50%), Gaps = 9/328 (2%)
Query: 150 AEAIFRRM-QSSGPR--PSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKM 206
A +F+RM + + P P+ TY I++ + A + VF LL ++ L PD
Sbjct: 99 AVELFKRMDRCACPEAAPTIYTYNILINCYRRARRPDLGLPVFGRLL---RTGLGPDVFS 155
Query: 207 FHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSK---IYDQMQ 263
++ +I + K G +KA LF M E+G+ + VTY+SL++ KE+ K + QM
Sbjct: 156 YNALIDGFSKEGEVDKAHDLFYKMEEQGIMPNVVTYSSLINGLCKTKEMDKAERVLRQMV 215
Query: 264 RAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVD 323
AG++P+ ++Y LI+ Y + +E++ VF+EM + + P N + A G +
Sbjct: 216 GAGVRPNNMTYNCLIHGYSTSGMWKESVRVFKEMSSSLLVPDVGNCNSFMTALCKHGRIK 275
Query: 324 QARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLI 383
+AR +F M PD+ SY +L Y A + G + F + +G VP+ + TLI
Sbjct: 276 EARDIFDSMVLKGPKPDVISYGALLHGYATAGCIAGMDNLFNVMVCEGVVPDRHVFNTLI 335
Query: 384 KGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFP 443
YA++ ++K + +++ M G+ P+ F+T++ A+ + D A+ + M G P
Sbjct: 336 NAYARLGMMDKSLLMFEDMTKQGVNPDIITFSTVISAFCRLGRLDDAMEKFNHMIDTGVP 395
Query: 444 PDQKAKNILLSLAKTADERNEANELLGN 471
PD + L+ + +A EL+ +
Sbjct: 396 PDTAVYSCLIQGQCNRRDLVKAKELISD 423
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 93/375 (24%), Positives = 175/375 (46%), Gaps = 42/375 (11%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
LI + K+G+ +KA + M ++G P+VV++++L+ + AE + R+M +G
Sbjct: 159 LIDGFSKEGEVDKAHDLFYKMEEQGIMPNVVTYSSLINGLCKTKEMDKAERVLRQMVGAG 218
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
RP+ +TY ++ + + +KE+ VF + S L PD + + K G +
Sbjct: 219 VRPNNMTYNCLIHGYSTSGMWKESVRVFKEM---SSSLLVPDVGNCNSFMTALCKHGRIK 275
Query: 222 KARKLFALMAERGVQQSTVTYNSLMSFETNYKEVS---KIYDQMQRAGLQPDVVSYALLI 278
+AR +F M +G + ++Y +L+ ++ +++ M G+ PD + LI
Sbjct: 276 EARDIFDSMVLKGPKPDVISYGALLHGYATAGCIAGMDNLFNVMVCEGVVPDRHVFNTLI 335
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCS 338
NAY + +++L +FE+M GV P ++ ++ AF G +D A F M
Sbjct: 336 NAYARLGMMDKSLLMFEDMTKQGVNPDIITFSTVISAFCRLGRLDDAMEKFNHMIDTGVP 395
Query: 339 PDICSYTTMLSAYVNASDMEGAE----------------KFF----RRLKQDGFV----- 373
PD Y+ ++ N D+ A+ KFF L ++G V
Sbjct: 396 PDTAVYSCLIQGQCNRRDLVKAKELISDMLSKGIPPPCIKFFTSIINNLCKEGRVAEGKD 455
Query: 374 -----------PNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYG 422
PN+IT+ +L+ GY V N+++ + + D M G++P+ + T++D Y
Sbjct: 456 VVDLIIHTGQRPNLITFNSLVDGYCLVGNMKEAVGLLDSMESVGVEPDIYTYNTLVDGYC 515
Query: 423 KNKDFDSAVVWYKEM 437
K+ D A+ +++M
Sbjct: 516 KHGRIDDALTLFRDM 530
Score = 135 bits (339), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 93/392 (23%), Positives = 172/392 (43%), Gaps = 42/392 (10%)
Query: 101 MLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSS 160
+LI Y + + V + + G P V S+ AL++ + + G A +F +M+
Sbjct: 123 ILINCYRRARRPDLGLPVFGRLLRTGLGPDVFSYNALIDGFSKEGEVDKAHDLFYKMEEQ 182
Query: 161 GPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGY 220
G P+ +TY ++ + + +AE V ++ + ++P+ ++ +I+ Y +G +
Sbjct: 183 GIMPNVVTYSSLINGLCKTKEMDKAERVLRQMVG---AGVRPNNMTYNCLIHGYSTSGMW 239
Query: 221 EKARKLFALMAERGVQQSTVTYNSLMSFETNY---KEVSKIYDQMQRAGLQPDVVSYALL 277
+++ ++F M+ + NS M+ + KE I+D M G +PDV+SY L
Sbjct: 240 KESVRVFKEMSSSLLVPDVGNCNSFMTALCKHGRIKEARDIFDSMVLKGPKPDVISYGAL 299
Query: 278 INAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRC 337
++ Y A +F M+ GV P +N L++A+A GM+D++ +F+ M +
Sbjct: 300 LHGYATAGCIAGMDNLFNVMVCEGVVPDRHVFNTLINAYARLGMMDKSLLMFEDMTKQGV 359
Query: 338 SPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMME 397
+PDI +++T++SA+ ++ A + F + G P+ Y LI+G +L K E
Sbjct: 360 NPDIITFSTVISAFCRLGRLDDAMEKFNHMIDTGVPPDTAVYSCLIQGQCNRRDLVKAKE 419
Query: 398 IYDKMRVNGI------------------------------------KPNQTIFTTIMDAY 421
+ M GI +PN F +++D Y
Sbjct: 420 LISDMLSKGIPPPCIKFFTSIINNLCKEGRVAEGKDVVDLIIHTGQRPNLITFNSLVDGY 479
Query: 422 GKNKDFDSAVVWYKEMESCGFPPDQKAKNILL 453
+ AV MES G PD N L+
Sbjct: 480 CLVGNMKEAVGLLDSMESVGVEPDIYTYNTLV 511
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 75/276 (27%), Positives = 141/276 (51%), Gaps = 6/276 (2%)
Query: 202 PDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSKIYD- 260
P ++++I Y++A + +F + G+ +YN+L+ + EV K +D
Sbjct: 116 PTIYTYNILINCYRRARRPDLGLPVFGRLLRTGLGPDVFSYNALIDGFSKEGEVDKAHDL 175
Query: 261 --QMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAI 318
+M+ G+ P+VV+Y+ LIN K + ++A V +M+ AGVRP + YN L+ ++
Sbjct: 176 FYKMEEQGIMPNVVTYSSLINGLCKTKEMDKAERVLRQMVGAGVRPNNMTYNCLIHGYST 235
Query: 319 SGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVIT 378
SGM ++ VFK M PD+ + + ++A ++ A F + G P+VI+
Sbjct: 236 SGMWKESVRVFKEMSSSLLVPDVGNCNSFMTALCKHGRIKEARDIFDSMVLKGPKPDVIS 295
Query: 379 YGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEME 438
YG L+ GYA + M +++ M G+ P++ +F T+++AY + D +++ +++M
Sbjct: 296 YGALLHGYATAGCIAGMDNLFNVMVCEGVVPDRHVFNTLINAYARLGMMDKSLLMFEDMT 355
Query: 439 SCGFPPDQKAKNILLSLAKTADERNEANELLGNFNH 474
G PD + ++S ++A E FNH
Sbjct: 356 KQGVNPDIITFSTVISAFCRLGRLDDAME---KFNH 388
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 77/320 (24%), Positives = 152/320 (47%), Gaps = 6/320 (1%)
Query: 128 APSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEE 187
AP++ ++ L+ Y R R +F R+ +G P +Y ++ F + + +A +
Sbjct: 115 APTIYTYNILINCYRRARRPDLGLPVFGRLLRTGLGPDVFSYNALIDGFSKEGEVDKAHD 174
Query: 188 VFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLM- 246
+F + E+ + P+ + +I K +KA ++ M GV+ + +TYN L+
Sbjct: 175 LFYKM---EEQGIMPNVVTYSSLINGLCKTKEMDKAERVLRQMVGAGVRPNNMTYNCLIH 231
Query: 247 --SFETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRP 304
S +KE +++ +M + L PDV + + A K R +EA +F+ M+ G +P
Sbjct: 232 GYSTSGMWKESVRVFKEMSSSLLVPDVGNCNSFMTALCKHGRIKEARDIFDSMVLKGPKP 291
Query: 305 THKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFF 364
+Y LL +A +G + +F M + PD + T+++AY M+ + F
Sbjct: 292 DVISYGALLHGYATAGCIAGMDNLFNVMVCEGVVPDRHVFNTLINAYARLGMMDKSLLMF 351
Query: 365 RRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKN 424
+ + G P++IT+ T+I + ++ L+ ME ++ M G+ P+ +++ ++
Sbjct: 352 EDMTKQGVNPDIITFSTVISAFCRLGRLDDAMEKFNHMIDTGVPPDTAVYSCLIQGQCNR 411
Query: 425 KDFDSAVVWYKEMESCGFPP 444
+D A +M S G PP
Sbjct: 412 RDLVKAKELISDMLSKGIPP 431
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 88/378 (23%), Positives = 167/378 (44%), Gaps = 5/378 (1%)
Query: 99 FLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQ 158
F LI AY + G +K+ + M K+G P +++ + ++ A+ R GR +A F M
Sbjct: 331 FNTLINAYARLGMMDKSLLMFEDMTKQGVNPDIITFSTVISAFCRLGRLDDAMEKFNHMI 390
Query: 159 SSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAG 218
+G P Y +++ +A+E+ +L + P P K F +I K G
Sbjct: 391 DTGVPPDTAVYSCLIQGQCNRRDLVKAKELISDMLSKGIPP--PCIKFFTSIINNLCKEG 448
Query: 219 GYEKARKLFALMAERGVQQSTVTYNSLM---SFETNYKEVSKIYDQMQRAGLQPDVVSYA 275
+ + + L+ G + + +T+NSL+ N KE + D M+ G++PD+ +Y
Sbjct: 449 RVAEGKDVVDLIIHTGQRPNLITFNSLVDGYCLVGNMKEAVGLLDSMESVGVEPDIYTYN 508
Query: 276 LLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRD 335
L++ Y K R ++AL +F +ML V T +YNI+L + A+ +F M
Sbjct: 509 TLVDGYCKHGRIDDALTLFRDMLHKRVTLTSVSYNIILHGLFQARRTIVAKEMFHEMIES 568
Query: 336 RCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKM 395
+ I +Y T+L + + A +L +++T+ +I+ KV ++
Sbjct: 569 GMAVSIHTYATVLGGLCRNNCTDEANMLLEKLFSMNVKFDILTFNIVIRAMFKVGRRQEA 628
Query: 396 MEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSL 455
E++ + G+ P + ++ K + F+ A + ME PD + N ++ +
Sbjct: 629 KELFAAISTYGLVPTILTYRVMITNLIKEESFEDADNLFSSMEKSSCTPDSRILNEIIRM 688
Query: 456 AKTADERNEANELLGNFN 473
E +A L +
Sbjct: 689 LLNKGEVAKAGNYLSKID 706
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 78/383 (20%), Positives = 158/383 (41%), Gaps = 9/383 (2%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
L+ Y G + + + M +G P L+ AY R G + +F M G
Sbjct: 299 LLHGYATAGCIAGMDNLFNVMVCEGVVPDRHVFNTLINAYARLGMMDKSLLMFEDMTKQG 358
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
P +T+ ++ F + +A E F ++D + + PD ++ +I
Sbjct: 359 VNPDIITFSTVISAFCRLGRLDDAMEKFNHMID---TGVPPDTAVYSCLIQGQCNRRDLV 415
Query: 222 KARKLFALMAERGVQQSTVTY-----NSLMSFETNYKEVSKIYDQMQRAGLQPDVVSYAL 276
KA++L + M +G+ + + N+L E E + D + G +P+++++
Sbjct: 416 KAKELISDMLSKGIPPPCIKFFTSIINNLCK-EGRVAEGKDVVDLIIHTGQRPNLITFNS 474
Query: 277 LINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDR 336
L++ Y +EA+ + + M GV P YN L+D + G +D A T+F+ M R
Sbjct: 475 LVDGYCLVGNMKEAVGLLDSMESVGVEPDIYTYNTLVDGYCKHGRIDDALTLFRDMLHKR 534
Query: 337 CSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMM 396
+ SY +L A A++ F + + G ++ TY T++ G + N ++
Sbjct: 535 VTLTSVSYNIILHGLFQARRTIVAKEMFHEMIESGMAVSIHTYATVLGGLCRNNCTDEAN 594
Query: 397 EIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLA 456
+ +K+ +K + F ++ A K A + + + G P ++++
Sbjct: 595 MLLEKLFSMNVKFDILTFNIVIRAMFKVGRRQEAKELFAAISTYGLVPTILTYRVMITNL 654
Query: 457 KTADERNEANELLGNFNHPNNEP 479
+ +A+ L + + P
Sbjct: 655 IKEESFEDADNLFSSMEKSSCTP 677
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 63/301 (20%), Positives = 122/301 (40%), Gaps = 41/301 (13%)
Query: 86 LRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGG 145
L I + N + F L+ Y G+ +A +L M G P + ++ L++ Y + G
Sbjct: 459 LIIHTGQRPNLITFNSLVDGYCLVGNMKEAVGLLDSMESVGVEPDIYTYNTLVDGYCKHG 518
Query: 146 RYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQK 205
R +A +FR M ++++Y IIL +A + A+E
Sbjct: 519 RIDDALTLFRDMLHKRVTLTSVSYNIILHGLFQARRTIVAKE------------------ 560
Query: 206 MFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSL---MSFETNYKEVSKIYDQM 262
MFH MI E G+ S TY ++ + E + + +++
Sbjct: 561 MFHEMI--------------------ESGMAVSIHTYATVLGGLCRNNCTDEANMLLEKL 600
Query: 263 QRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMV 322
++ D++++ ++I A K R +EA +F + G+ PT Y +++
Sbjct: 601 FSMNVKFDILTFNIVIRAMFKVGRRQEAKELFAAISTYGLVPTILTYRVMITNLIKEESF 660
Query: 323 DQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTL 382
+ A +F M + C+PD ++ +N ++ A + ++ + G +P T L
Sbjct: 661 EDADNLFSSMEKSSCTPDSRILNEIIRMLLNKGEVAKAGNYLSKIDKKGILPEATTTSLL 720
Query: 383 I 383
I
Sbjct: 721 I 721
>gi|302754868|ref|XP_002960858.1| hypothetical protein SELMODRAFT_75631 [Selaginella moellendorffii]
gi|300171797|gb|EFJ38397.1| hypothetical protein SELMODRAFT_75631 [Selaginella moellendorffii]
Length = 699
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 88/351 (25%), Positives = 167/351 (47%), Gaps = 8/351 (2%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N+ + +LI + GD + A ++L M G+ + V HT LM+ GR A F
Sbjct: 56 NKFTYGILIRGFSSAGDLDIAIQLLEEMKSSGFEGNAVVHTTLMKGLCDAGRVVEALEHF 115
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
R M P +TY ++ +A KF EA+ + ++ + +P D F +I
Sbjct: 116 RAMAKDCA-PDVMTYTALVHALCKAGKFDEAQGMLREMVAQGCAP---DTVTFSTLIDGL 171
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETN-YKEV---SKIYDQMQRAGLQPD 270
K G E+A ++ + +RG+ S + +++ N Y V SK+ + G P
Sbjct: 172 CKFGSEEQAFRVLEDVIQRGMGNSDAAFETIIQRLCNKYNSVELASKVLGVVIAKGFTPT 231
Query: 271 VVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFK 330
V+ + L+IN + KA+ + A + E M++ G P + IL+ + V +A+ + +
Sbjct: 232 VLMFNLVINGFCKAKDLDSAYKLLEVMIEKGCVPNVFTFTILITGLCKANRVGEAQQLLE 291
Query: 331 CMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVN 390
M CSP++ +Y+T+++ ++ A + F+ +++ PNV+T+ LI G K
Sbjct: 292 KMVMGGCSPNVVTYSTVINGLCKQGQVDDAYELFQLMERRNCPPNVVTHNILIDGLCKAK 351
Query: 391 NLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCG 441
+E+ ++Y +MR G P+ + +++D K+ D A ++ + G
Sbjct: 352 RIEEARQLYHRMRETGCAPDIITYNSLIDGLCKSFQVDEAFQLFQTIPESG 402
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 97/423 (22%), Positives = 193/423 (45%), Gaps = 13/423 (3%)
Query: 44 AVAVLRSERTRGQPLPKDLVLGTLVR-LKQLKKWNVVSEVLEWLRIQSWWDFNEMDFLML 102
A+A+ R+ R +P G L+R ++ ++LE ++ S ++ N + L
Sbjct: 41 ALALFRNAMAR-ICMPNKFTYGILIRGFSSAGDLDIAIQLLEEMK-SSGFEGNAVVHTTL 98
Query: 103 ITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGP 162
+ G +A + M K AP V+++TAL+ A + G++ A+ + R M + G
Sbjct: 99 MKGLCDAGRVVEALEHFRAMAKD-CAPDVMTYTALVHALCKAGKFDEAQGMLREMVAQGC 157
Query: 163 RPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIY-MYKKAGGYE 221
P +T+ ++ KF E+ F L D + + F +I + K E
Sbjct: 158 APDTVTFSTLIDGLC---KFGSEEQAFRVLEDVIQRGMGNSDAAFETIIQRLCNKYNSVE 214
Query: 222 KARKLFALMAERGVQQSTVTYNSLMSFETNYKEVS---KIYDQMQRAGLQPDVVSYALLI 278
A K+ ++ +G + + +N +++ K++ K+ + M G P+V ++ +LI
Sbjct: 215 LASKVLGVVIAKGFTPTVLMFNLVINGFCKAKDLDSAYKLLEVMIEKGCVPNVFTFTILI 274
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCS 338
KA R EA + E+M+ G P Y+ +++ G VD A +F+ M R C
Sbjct: 275 TGLCKANRVGEAQQLLEKMVMGGCSPNVVTYSTVINGLCKQGQVDDAYELFQLMERRNCP 334
Query: 339 PDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEI 398
P++ ++ ++ A +E A + + R+++ G P++ITY +LI G K +++ ++
Sbjct: 335 PNVVTHNILIDGLCKAKRIEEARQLYHRMRETGCAPDIITYNSLIDGLCKSFQVDEAFQL 394
Query: 399 YDKMRVNGIK-PNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKA-KNILLSLA 456
+ + +G+ N ++T+ Y A + + GF PD +++L
Sbjct: 395 FQTIPESGVSAANAVTYSTLFHGYAALGRMADACRIFSMLVDKGFSPDLATYTSLILEYC 454
Query: 457 KTA 459
KT+
Sbjct: 455 KTS 457
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 85/373 (22%), Positives = 169/373 (45%), Gaps = 14/373 (3%)
Query: 115 AEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILK 174
A KVL + KG+ P+V+ ++ + + +A + M G P+ T+ I++
Sbjct: 216 ASKVLGVVIAKGFTPTVLMFNLVINGFCKAKDLDSAYKLLEVMIEKGCVPNVFTFTILIT 275
Query: 175 LFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERG 234
+AN+ EA+++ ++ P+ + +I K G + A +LF LM R
Sbjct: 276 GLCKANRVGEAQQLLEKMV---MGGCSPNVVTYSTVINGLCKQGQVDDAYELFQLMERRN 332
Query: 235 VQQSTVTYNSLMSFETNYK---EVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEAL 291
+ VT+N L+ K E ++Y +M+ G PD+++Y LI+ K+ + +EA
Sbjct: 333 CPPNVVTHNILIDGLCKAKRIEEARQLYHRMRETGCAPDIITYNSLIDGLCKSFQVDEAF 392
Query: 292 AVFEEMLDAGVRPTHKA-YNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSA 350
+F+ + ++GV + Y+ L +A G + A +F + SPD+ +YT+++
Sbjct: 393 QLFQTIPESGVSAANAVTYSTLFHGYAALGRMADACRIFSMLVDKGFSPDLATYTSLILE 452
Query: 351 YVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPN 410
Y S + + GF P V T ++ G + N+ E+ ++++D M G +
Sbjct: 453 YCKTSRAVEVVELVEEMASKGFPPRVNTLSAVLGGLFEGNHTERAIQLFDSMAARGCTDD 512
Query: 411 QTIFTTIMDAYGKNKDFDSAVVWYKEM---ESCGFPPDQKAKNILLSLAKTADERNEANE 467
I+ +++ + D A+ +++ F P A + L+ + ++A +
Sbjct: 513 ALIYNLVVEGMARASKHDKALAVLEQVIDKRDRKFNPSSSAVDALVESLCQVGKTDDAKQ 572
Query: 468 LLGNFNHPNNEPG 480
LL H +E G
Sbjct: 573 LL----HKMSERG 581
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 91/376 (24%), Positives = 163/376 (43%), Gaps = 12/376 (3%)
Query: 113 NKAEKVLSFMN--KKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQ 170
+K E VL F + + +V S ++ R R + A A+FR + P+ TY
Sbjct: 2 DKPELVLLFFDWARSRVGHNVFSCNCALDMLCRLNRRQEALALFRNAMARICMPNKFTYG 61
Query: 171 IILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFH-MMIYMYKKAGGYEKARKLFAL 229
I+++ F A ++ + LL+E KS + H ++ AG +A + F
Sbjct: 62 ILIRGFSSAGDL----DIAIQLLEEMKSSGFEGNAVVHTTLMKGLCDAGRVVEALEHFRA 117
Query: 230 MAERGVQQSTVTYNSL---MSFETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARR 286
MA + +TY +L + + E + +M G PD V+++ LI+ K
Sbjct: 118 MA-KDCAPDVMTYTALVHALCKAGKFDEAQGMLREMVAQGCAPDTVTFSTLIDGLCKFGS 176
Query: 287 EEEALAVFEEMLDAGVRPTHKAYNILLDAFAIS-GMVDQARTVFKCMRRDRCSPDICSYT 345
EE+A V E+++ G+ + A+ ++ V+ A V + +P + +
Sbjct: 177 EEQAFRVLEDVIQRGMGNSDAAFETIIQRLCNKYNSVELASKVLGVVIAKGFTPTVLMFN 236
Query: 346 TMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVN 405
+++ + A D++ A K + + G VPNV T+ LI G K N + + ++ +KM +
Sbjct: 237 LVINGFCKAKDLDSAYKLLEVMIEKGCVPNVFTFTILITGLCKANRVGEAQQLLEKMVMG 296
Query: 406 GIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEA 465
G PN ++T+++ K D A ++ ME PP+ NIL+ A EA
Sbjct: 297 GCSPNVVTYSTVINGLCKQGQVDDAYELFQLMERRNCPPNVVTHNILIDGLCKAKRIEEA 356
Query: 466 NELLGNFNHPNNEPGI 481
+L P I
Sbjct: 357 RQLYHRMRETGCAPDI 372
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 88/423 (20%), Positives = 177/423 (41%), Gaps = 80/423 (18%)
Query: 68 VRLKQLKKWNVVSEVLEWLR--IQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKK 125
+ + L K N V E + L + N + + +I KQG + A ++ M ++
Sbjct: 272 ILITGLCKANRVGEAQQLLEKMVMGGCSPNVVTYSTVINGLCKQGQVDDAYELFQLMERR 331
Query: 126 GYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEA 185
P+VV+H L++ + R + A ++ RM+ +G P +TY ++ ++ + EA
Sbjct: 332 NCPPNVVTHNILIDGLCKAKRIEEARQLYHRMRETGCAPDIITYNSLIDGLCKSFQVDEA 391
Query: 186 EEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSL 245
++F T+ E + + + + Y G A ++F+++ ++G TY SL
Sbjct: 392 FQLFQTI--PESGVSAANAVTYSTLFHGYAALGRMADACRIFSMLVDKGFSPDLATYTSL 449
Query: 246 MS-------------------------------------FETNYKEVS-KIYDQMQRAGL 267
+ FE N+ E + +++D M G
Sbjct: 450 ILEYCKTSRAVEVVELVEEMASKGFPPRVNTLSAVLGGLFEGNHTERAIQLFDSMAARGC 509
Query: 268 QPDVVSYALLINAYGKARREEEALAVFEEMLDAGVR---PTHKAYNILLDAFA------- 317
D + Y L++ +A + ++ALAV E+++D R P+ A + L+++
Sbjct: 510 TDDALIYNLVVEGMARASKHDKALAVLEQVIDKRDRKFNPSSSAVDALVESLCQVGKTDD 569
Query: 318 -----------------------ISGMV-----DQARTVFKCMRRDRCSPDICSYTTMLS 349
+SG+ D+A VF+ M +P+I + ++S
Sbjct: 570 AKQLLHKMSERGFAAAVSSYNRLLSGLSRLQRWDEATQVFEAMVSAGPAPEISTVNVVIS 629
Query: 350 AYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKP 409
+A+ ++ A + +R+ + G P++ T TLI GY K + ++ ++M G++P
Sbjct: 630 WLCSAAKVDDAYELVQRMSKLGCCPDIETCNTLIGGYCKSGRADLARKLLEEMTEAGLEP 689
Query: 410 NQT 412
N T
Sbjct: 690 NDT 692
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 64/294 (21%), Positives = 128/294 (43%), Gaps = 9/294 (3%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + + L Y G A ++ S + KG++P + ++T+L+ Y + R +
Sbjct: 407 NAVTYSTLFHGYAALGRMADACRIFSMLVDKGFSPDLATYTSLILEYCKTSRAVEVVELV 466
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
M S G P T +L E N + A ++F ++ D ++++++
Sbjct: 467 EEMASKGFPPRVNTLSAVLGGLFEGNHTERAIQLFDSM---AARGCTDDALIYNLVVEGM 523
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSKIYD------QMQRAGLQ 268
+A ++KA + + ++ ++ + +++ + + +V K D +M G
Sbjct: 524 ARASKHDKALAVLEQVIDKRDRKFNPSSSAVDALVESLCQVGKTDDAKQLLHKMSERGFA 583
Query: 269 PDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTV 328
V SY L++ + +R +EA VFE M+ AG P N+++ + VD A +
Sbjct: 584 AAVSSYNRLLSGLSRLQRWDEATQVFEAMVSAGPAPEISTVNVVISWLCSAAKVDDAYEL 643
Query: 329 FKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTL 382
+ M + C PDI + T++ Y + + A K + + G PN T+ L
Sbjct: 644 VQRMSKLGCCPDIETCNTLIGGYCKSGRADLARKLLEEMTEAGLEPNDTTHDLL 697
>gi|449491568|ref|XP_004158939.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
mitochondrial-like [Cucumis sativus]
Length = 412
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 100/385 (25%), Positives = 176/385 (45%), Gaps = 29/385 (7%)
Query: 111 DFNKAEKVLSFMN---KKGYAPSVVSHTALMEAYGRGGRYKNAEAI-------------- 153
+ N+ + L+ M ++GY P +V++ L++ R R A I
Sbjct: 22 NLNRVSEGLAAMTGILRRGYIPDIVTYNTLIKGLCRVHRISVATCIIIDGLCKVGHEDEA 81
Query: 154 ---FRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMM 210
F M++ G P+ ++Y ++ F A K +E++ +F ++D+ ++P+ F+++
Sbjct: 82 KEIFEEMKAQGMIPNVISYSSLVHGFCCAGKLEESKRLFNEMVDQ---GVQPNLVQFNVL 138
Query: 211 IYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVS---KIYDQMQRAGL 267
I + K G +A+KL + +RG+ VTYNSL+ ++S K++ M G
Sbjct: 139 IDILCKEGKVIEAKKLLEVTIQRGIILDLVTYNSLIDGFCKIGDLSSARKLFLSMPSKGC 198
Query: 268 QPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQART 327
+ + +SY +LIN Y K + EEA+ ++ EM G RP K Y+ LL +G V A
Sbjct: 199 EHNEISYTILINGYCKIWKVEEAMNLYNEMPQVGKRPNVKTYSTLLTGLLQTGKVGDANK 258
Query: 328 VFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYA 387
+F M+ S D C Y L + A + F LK F + +Y LI G
Sbjct: 259 LFGVMKASGISVDSCIYVIFLDGLCKNGVLFEAMELFNELKSYNFKLDFESYSRLIDGLC 318
Query: 388 KVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESC---GFPP 444
K +E E + ++ G++PN ++ + + + D A + +++ME G P
Sbjct: 319 KAGKVEIAWEFFKQLSQEGLQPNVVTCNIMIHGFCRVEQVDKANILFEKMEKMEENGCTP 378
Query: 445 DQKAKNILLSLAKTADERNEANELL 469
D N LL +++ E LL
Sbjct: 379 DIITYNTLLRGFCESNKLEEVVNLL 403
Score = 102 bits (253), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 80/370 (21%), Positives = 155/370 (41%), Gaps = 24/370 (6%)
Query: 122 MNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANK 181
M+ G +P + + L R A + G P +TY ++K ++
Sbjct: 1 MHLAGLSPDLFTLNILANCLCNLNRVSEGLAAMTGILRRGYIPDIVTYNTLIKGLCRVHR 60
Query: 182 FKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVT 241
A + + L K G ++A+++F M +G+ + ++
Sbjct: 61 ISVATCIIIDGLC---------------------KVGHEDEAKEIFEEMKAQGMIPNVIS 99
Query: 242 YNSLM---SFETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEML 298
Y+SL+ +E +++++M G+QP++V + +LI+ K + EA + E +
Sbjct: 100 YSSLVHGFCCAGKLEESKRLFNEMVDQGVQPNLVQFNVLIDILCKEGKVIEAKKLLEVTI 159
Query: 299 DAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDME 358
G+ YN L+D F G + AR +F M C + SYT +++ Y +E
Sbjct: 160 QRGIILDLVTYNSLIDGFCKIGDLSSARKLFLSMPSKGCEHNEISYTILINGYCKIWKVE 219
Query: 359 GAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIM 418
A + + Q G PNV TY TL+ G + + +++ M+ +GI + I+ +
Sbjct: 220 EAMNLYNEMPQVGKRPNVKTYSTLLTGLLQTGKVGDANKLFGVMKASGISVDSCIYVIFL 279
Query: 419 DAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNE 478
D KN A+ + E++S F D ++ + L+ A + A E + +
Sbjct: 280 DGLCKNGVLFEAMELFNELKSYNFKLDFESYSRLIDGLCKAGKVEIAWEFFKQLSQEGLQ 339
Query: 479 PGINGLSISV 488
P + +I +
Sbjct: 340 PNVVTCNIMI 349
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/275 (23%), Positives = 124/275 (45%), Gaps = 42/275 (15%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
LI + K GD + A K+ M KG + +S+T L+ Y + + + A ++ M G
Sbjct: 173 LIDGFCKIGDLSSARKLFLSMPSKGCEHNEISYTILINGYCKIWKVEEAMNLYNEMPQVG 232
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
RP+ TY +L ++ K +A K+F +M KA G
Sbjct: 233 KRPNVKTYSTLLTGLLQTGKVGDA------------------NKLFGVM-----KASGIS 269
Query: 222 KARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSKIYDQMQRAGLQPDVVSYALLINAY 281
++ + + G+ ++ V + E +++++++ + D SY+ LI+
Sbjct: 270 VDSCIYVIFLD-GLCKNGVLF-----------EAMELFNELKSYNFKLDFESYSRLIDGL 317
Query: 282 GKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRR---DRCS 338
KA + E A F+++ G++P NI++ F VD+A +F+ M + + C+
Sbjct: 318 CKAGKVEIAWEFFKQLSQEGLQPNVVTCNIMIHGFCRVEQVDKANILFEKMEKMEENGCT 377
Query: 339 PDICSYTTMLSAYVNASDMEGA----EKFFRRLKQ 369
PDI +Y T+L + ++ +E K F+R++
Sbjct: 378 PDIITYNTLLRGFCESNKLEEVVNLLHKMFKRMRH 412
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 106/214 (49%), Gaps = 11/214 (5%)
Query: 92 WDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAE 151
+ NE+ + +LI Y K +A + + M + G P+V +++ L+ + G+ +A
Sbjct: 198 CEHNEISYTILINGYCKIWKVEEAMNLYNEMPQVGKRPNVKTYSTLLTGLLQTGKVGDAN 257
Query: 152 AIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKS-PLKPDQKMFHMM 210
+F M++SG + Y I L + EA E+F +E KS K D + + +
Sbjct: 258 KLFGVMKASGISVDSCIYVIFLDGLCKNGVLFEAMELF----NELKSYNFKLDFESYSRL 313
Query: 211 IYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSK---IYDQMQRA-- 265
I KAG E A + F +++ G+Q + VT N ++ ++V K ++++M++
Sbjct: 314 IDGLCKAGKVEIAWEFFKQLSQEGLQPNVVTCNIMIHGFCRVEQVDKANILFEKMEKMEE 373
Query: 266 -GLQPDVVSYALLINAYGKARREEEALAVFEEML 298
G PD+++Y L+ + ++ + EE + + +M
Sbjct: 374 NGCTPDIITYNTLLRGFCESNKLEEVVNLLHKMF 407
>gi|225430029|ref|XP_002281569.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g25630-like [Vitis vinifera]
Length = 635
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 87/360 (24%), Positives = 172/360 (47%), Gaps = 5/360 (1%)
Query: 97 MDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRR 156
+ + L+ A Q F+ ++S + + G P + A++ A+ G + A F +
Sbjct: 108 VTYTTLLAALTIQKHFDSIHSIISQVEENGMEPDSIFFNAVINAFSESGNMQEAMKYFWK 167
Query: 157 MQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKK 216
M+ SG +P+ T+ ++K + A + +E++++ + +E ++P+ + +++++ +
Sbjct: 168 MKESGSKPTTSTFNTLIKGYGIAGEPEESQKLLELMSQDEN--VRPNLRTYNVLVRAWCN 225
Query: 217 AGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSK---IYDQMQRAGLQPDVVS 273
KA + M G+Q VTYN++ + E S+ I +MQ + +QP+ +
Sbjct: 226 KKNIMKAWNVVYKMVASGLQPDAVTYNTIATAYAQNGEASQAEGIILEMQNSNVQPNERT 285
Query: 274 YALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMR 333
++I Y K + +EAL M D G++P +N L+ F + D V M
Sbjct: 286 CCIIIGGYCKEGKIKEALQFVYRMKDLGLQPNLVVFNSLIKGFIDAVDRDGVNEVLTLME 345
Query: 334 RDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLE 393
PD+ +++T+++A+ A M+ + F + + P+ Y L KGY + E
Sbjct: 346 EFGVKPDVITFSTIMNAWSAAGFMDKCREIFDDMVKARIQPDAHVYSILAKGYVRAGEPE 405
Query: 394 KMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILL 453
K EI + M +G PN IFTTI++ + + A+ +++M CG P+ K L+
Sbjct: 406 KAEEILNAMIKSGFHPNVVIFTTIINGWCSAGRMEYAIKIFEKMCECGIAPNLKTFETLI 465
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 91/368 (24%), Positives = 171/368 (46%), Gaps = 12/368 (3%)
Query: 117 KVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLF 176
+ +S ++K +V S T LM GR + ++I + G +PS +TY +L
Sbjct: 59 RCISCLSKTS-CRTVRSRTKLMNIMIEKGRPQEVQSILDSIIEGGHKPSLVTYTTLLAAL 117
Query: 177 VEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQ 236
F + + E++ ++PD F+ +I + ++G ++A K F M E G +
Sbjct: 118 TIQKHFDSIHSIISQV---EENGMEPDSIFFNAVINAFSESGNMQEAMKYFWKMKESGSK 174
Query: 237 QSTVTYNSLM---SFETNYKEVSKIYDQM-QRAGLQPDVVSYALLINAYGKARREEEALA 292
+T T+N+L+ +E K+ + M Q ++P++ +Y +L+ A+ + +A
Sbjct: 175 PTTSTFNTLIKGYGIAGEPEESQKLLELMSQDENVRPNLRTYNVLVRAWCNKKNIMKAWN 234
Query: 293 VFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYV 352
V +M+ +G++P YN + A+A +G QA + M+ P+ + ++ Y
Sbjct: 235 VVYKMVASGLQPDAVTYNTIATAYAQNGEASQAEGIILEMQNSNVQPNERTCCIIIGGYC 294
Query: 353 NASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQT 412
++ A +F R+K G PN++ + +LIKG+ + + + E+ M G+KP+
Sbjct: 295 KEGKIKEALQFVYRMKDLGLQPNLVVFNSLIKGFIDAVDRDGVNEVLTLMEEFGVKPDVI 354
Query: 413 IFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNF 472
F+TIM+A+ D + +M PD +IL A E +A E+L
Sbjct: 355 TFSTIMNAWSAAGFMDKCREIFDDMVKARIQPDAHVYSILAKGYVRAGEPEKAEEILNAM 414
Query: 473 N----HPN 476
HPN
Sbjct: 415 IKSGFHPN 422
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 74/324 (22%), Positives = 142/324 (43%), Gaps = 41/324 (12%)
Query: 101 MLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSS 160
+L+ A+ + + KA V+ M G P V++ + AY + G AE I MQ+S
Sbjct: 218 VLVRAWCNKKNIMKAWNVVYKMVASGLQPDAVTYNTIATAYAQNGEASQAEGIILEMQNS 277
Query: 161 GPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGY 220
+P+ T II+ + + K KEA + + D L+P+ +F+ +I + A
Sbjct: 278 NVQPNERTCCIIIGGYCKEGKIKEALQFVYRMKD---LGLQPNLVVFNSLIKGFIDAVDR 334
Query: 221 EKARKLFALMAERGVQQSTVTYNSLM---SFETNYKEVSKIYDQMQRAGLQPDVVSYALL 277
+ ++ LM E GV+ +T++++M S + +I+D M +A +QPD Y++L
Sbjct: 335 DGVNEVLTLMEEFGVKPDVITFSTIMNAWSAAGFMDKCREIFDDMVKARIQPDAHVYSIL 394
Query: 278 INAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRC 337
Y +A E+A + M+ +G P + +++ + +G ++ A +F+
Sbjct: 395 AKGYVRAGEPEKAEEILNAMIKSGFHPNVVIFTTIINGWCSAGRMEYAIKIFE------- 447
Query: 338 SPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMME 397
++ + G PN+ T+ TLI GY + K E
Sbjct: 448 ----------------------------KMCECGIAPNLKTFETLIWGYGEARQPWKSEE 479
Query: 398 IYDKMRVNGIKPNQTIFTTIMDAY 421
+ M ++P +T + +A+
Sbjct: 480 VLQIMEEFNVQPEKTTLLLVAEAW 503
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 76/324 (23%), Positives = 146/324 (45%), Gaps = 16/324 (4%)
Query: 73 LKKWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVV 132
+K WNVV ++ + S + + + + TAY + G+ ++AE ++ M P+
Sbjct: 230 MKAWNVVYKM-----VASGLQPDAVTYNTIATAYAQNGEASQAEGIILEMQNSNVQPNER 284
Query: 133 SHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTL 192
+ ++ Y + G+ K A RM+ G +P+ + + ++K F++A EV +TL
Sbjct: 285 TCCIIIGGYCKEGKIKEALQFVYRMKDLGLQPNLVVFNSLIKGFIDAVDRDGVNEV-LTL 343
Query: 193 LDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNY 252
++E +KPD F ++ + AG +K R++F M + +Q Y+ L
Sbjct: 344 MEE--FGVKPDVITFSTIMNAWSAAGFMDKCREIFDDMVKARIQPDAHVYSILAKGYVRA 401
Query: 253 KEVSK---IYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAY 309
E K I + M ++G P+VV + +IN + A R E A+ +FE+M + G+ P K +
Sbjct: 402 GEPEKAEEILNAMIKSGFHPNVVIFTTIINGWCSAGRMEYAIKIFEKMCECGIAPNLKTF 461
Query: 310 NILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQ 369
L+ + + ++ V + M P+ + + A+ + A + +K
Sbjct: 462 ETLIWGYGEARQPWKSEEVLQIMEEFNVQPEKTTLLLVAEAWRATGLKKEANRILSAVKN 521
Query: 370 DGFVPNV-----ITYGTLIKGYAK 388
+ I G+L K Y K
Sbjct: 522 EEMTHETDREDKIPVGSLEKHYQK 545
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/210 (22%), Positives = 97/210 (46%), Gaps = 1/210 (0%)
Query: 271 VVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFK 330
V S L+N + R +E ++ + +++ G +P+ Y LL A I D ++
Sbjct: 72 VRSRTKLMNIMIEKGRPQEVQSILDSIIEGGHKPSLVTYTTLLAALTIQKHFDSIHSIIS 131
Query: 331 CMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVN 390
+ + PD + +++A+ + +M+ A K+F ++K+ G P T+ TLIKGY
Sbjct: 132 QVEENGMEPDSIFFNAVINAFSESGNMQEAMKYFWKMKESGSKPTTSTFNTLIKGYGIAG 191
Query: 391 NLEKMMEIYDKMRVN-GIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAK 449
E+ ++ + M + ++PN + ++ A+ K+ A +M + G PD
Sbjct: 192 EPEESQKLLELMSQDENVRPNLRTYNVLVRAWCNKKNIMKAWNVVYKMVASGLQPDAVTY 251
Query: 450 NILLSLAKTADERNEANELLGNFNHPNNEP 479
N + + E ++A ++ + N +P
Sbjct: 252 NTIATAYAQNGEASQAEGIILEMQNSNVQP 281
>gi|449443726|ref|XP_004139628.1| PREDICTED: pentatricopeptide repeat-containing protein At5g48730,
chloroplastic-like [Cucumis sativus]
Length = 456
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 104/382 (27%), Positives = 183/382 (47%), Gaps = 14/382 (3%)
Query: 51 ERTRG-----QPLPKDLVLGTLVRLKQLKKWNVVSEVLEWLRIQSWWDFNEMDFLMLITA 105
ER RG + LP+ ++ R+ L+ W +V E LR Q W+ ++ LI
Sbjct: 51 ERKRGPNNSKKLLPRTVLEALHDRITTLR-WESALKVFELLREQLWYRPYAGMYIKLIVM 109
Query: 106 YGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG-PRP 164
GK KA ++ M ++G S S+TAL+ AY R G A +I M++S +P
Sbjct: 110 LGKCKQQEKAYELFQEMIEEGCEVSHESYTALLSAYSRSGLLDEAFSILNEMKNSPDCQP 169
Query: 165 SALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKAR 224
TY I++K ++ F +A+ + L D +KP+ ++ I Y KA + +
Sbjct: 170 DVHTYSILIKSCLQVFAFNKAQTL---LSDMVTRGIKPNTITYNTFIDAYGKAKMFAEME 226
Query: 225 KLFA-LMAERGVQQSTVTYNS-LMSF--ETNYKEVSKIYDQMQRAGLQPDVVSYALLINA 280
+ ++ + G + T NS L +F + + K Y++ Q AG+QP + ++ +L+++
Sbjct: 227 SILVDMLNDDGCKPDVWTMNSTLRAFGRSGQLETMEKCYEKFQEAGIQPSIQTFNILLDS 286
Query: 281 YGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPD 340
YGKA E+ AV E M T YNI++DAF +G + Q +F+ MR +R P
Sbjct: 287 YGKAESYEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGNLKQMEHLFRLMRSERIKPS 346
Query: 341 ICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYD 400
+ +++ AY A E + ++ + + + Y L+ Y ++ +M ++
Sbjct: 347 CVTLCSLVRAYGQAGKREKIDSVLNLVENSDIMLDTVFYNCLVDAYGRLECFAEMKKVLG 406
Query: 401 KMRVNGIKPNQTIFTTIMDAYG 422
M G KP++T + T+ AY
Sbjct: 407 MMEQRGCKPDKTTYRTMARAYS 428
Score = 43.1 bits (100), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 28/105 (26%), Positives = 49/105 (46%), Gaps = 5/105 (4%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
L+ AYG+ G K + VL+ + V + L++AYGR + + + M+ G
Sbjct: 353 LVRAYGQAGKREKIDSVLNLVENSDIMLDTVFYNCLVDAYGRLECFAEMKKVLGMMEQRG 412
Query: 162 PRPSALTYQIILKLFVE---ANKFKEAEEVFMTLLDEEKSPLKPD 203
+P TY+ + + + + AN KE +E+ T E +PD
Sbjct: 413 CKPDKTTYRTMARAYSDGGMANHAKEIQELITT--AEPSKRTRPD 455
>gi|224086334|ref|XP_002307852.1| predicted protein [Populus trichocarpa]
gi|222853828|gb|EEE91375.1| predicted protein [Populus trichocarpa]
Length = 670
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 96/404 (23%), Positives = 188/404 (46%), Gaps = 41/404 (10%)
Query: 78 VVSEVLEWLRIQSWWD--FNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHT 135
+V E ++ L + W D F + + +LI + + G + A K+ S M K P++
Sbjct: 269 LVDEAIKLLGDKKWNDPVFEDNLYHLLICSCKELGHLDSAVKIYSLMPKSDDRPNLHISC 328
Query: 136 ALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDE 195
+++ Y G++ E ++ +++SSG + + I+++++V+A K+A V T+ E
Sbjct: 329 TMIDIYTTMGQFNEGEKLYMKLKSSGIGLDVIAFSIVIRMYVKAGSLKDACSVLETM--E 386
Query: 196 EKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETN---Y 252
++ + PD +F M+ +Y++ G +K L+ + + GV YN L++
Sbjct: 387 KEKDMVPDIYLFRDMLRVYQQCGMMDKLNDLYFKILKSGVVWDQELYNCLINCCARALPV 446
Query: 253 KEVSKIYDQMQRAGLQP----------------------------------DVVSYALLI 278
E+S+++++M + G P DV+SY +I
Sbjct: 447 GELSRLFNEMLQRGFDPNTITFNVMLDVYAKAKLFNKARELFMMARKRGLVDVISYNTII 506
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCS 338
AYG+ R + + M G + +AYN +LDA+ G ++ R+V + M+ C+
Sbjct: 507 AAYGRKRDFKNMASTIHTMQFDGFSVSLEAYNCVLDAYGKEGQMESFRSVLQRMKNSSCT 566
Query: 339 PDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEI 398
D +Y M++ Y ++ L++ G P++ +Y TLIK Y +E + +
Sbjct: 567 ADHYTYNIMMNIYGELGWIDEVAGVLTELRECGLGPDLCSYNTLIKAYGIAGMVEDAVGL 626
Query: 399 YDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGF 442
+MR NG++P++ +T ++ KN + AV W M+ G
Sbjct: 627 VKEMRQNGVEPDKITYTNLITTLQKNDKYLEAVKWSLWMKQRGL 670
Score = 108 bits (271), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 98/425 (23%), Positives = 185/425 (43%), Gaps = 63/425 (14%)
Query: 94 FNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAI 153
N ++L+L+ AY +QG KAE++L M + ++P++V++ L+ YG+ A+ +
Sbjct: 78 LNLENWLVLLNAYSQQGKLEKAEQLLVAMQEAKFSPTIVAYNILITGYGKASNMVAAQRL 137
Query: 154 FRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYM 213
F +Q++G P TY+ +++ + +KEAE + L ++ KP+ + +I +
Sbjct: 138 FSGIQNAGLEPDDTTYRSMIEGWGRVGNYKEAEWYYKEL---KRLGFKPNSPNLYTLINL 194
Query: 214 YKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSKIYDQMQRAGLQPDVV- 272
+ G E A + M + G Q S++ L ++E + KI ++ + Q V
Sbjct: 195 QAEHGDEEGACRTLDDMLKIGCQYSSILGTLLKAYE-KVGRIDKIPFLLKGSFYQHVTVN 253
Query: 273 --SYALLINAYGKARREEEAL----------AVFEEMLDAGVRPTHKAYNILLDAFAISG 320
S ++L+ AY K +EA+ VFE+ L Y++L+ + G
Sbjct: 254 QNSCSILVIAYVKNLLVDEAIKLLGDKKWNDPVFEDNL----------YHLLICSCKELG 303
Query: 321 MVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYG 380
+D A ++ M + P++ TM+ Y EK + +LK G +VI +
Sbjct: 304 HLDSAVKIYSLMPKSDDRPNLHISCTMIDIYTTMGQFNEGEKLYMKLKSSGIGLDVIAFS 363
Query: 381 TLIKGYAKVNNLEKMMEIYDKM-RVNGIKPNQTIFTTIMDAYGKN-----------KDFD 428
+I+ Y K +L+ + + M + + P+ +F ++ Y + K
Sbjct: 364 IVIRMYVKAGSLKDACSVLETMEKEKDMVPDIYLFRDMLRVYQQCGMMDKLNDLYFKILK 423
Query: 429 SAVVWYKEMESC------------------------GFPPDQKAKNILLSLAKTADERNE 464
S VVW +E+ +C GF P+ N++L + A N+
Sbjct: 424 SGVVWDQELYNCLINCCARALPVGELSRLFNEMLQRGFDPNTITFNVMLDVYAKAKLFNK 483
Query: 465 ANELL 469
A EL
Sbjct: 484 ARELF 488
Score = 99.4 bits (246), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 107/208 (51%), Gaps = 2/208 (0%)
Query: 262 MQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGM 321
M G+QP+V ++ +++ Y K EEA F +M G+ AY+ ++ + +
Sbjct: 2 MLELGVQPNVATFGMVMGLYQKGWNVEEAEFSFAQMRSFGI-ICQSAYSAMITIYTRLSL 60
Query: 322 VDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGT 381
D+A V MR D+ ++ ++ +L+AY +E AE+ +++ F P ++ Y
Sbjct: 61 YDKAEEVIGLMRDDKVVLNLENWLVLLNAYSQQGKLEKAEQLLVAMQEAKFSPTIVAYNI 120
Query: 382 LIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCG 441
LI GY K +N+ ++ ++ G++P+ T + ++++ +G+ ++ A +YKE++ G
Sbjct: 121 LITGYGKASNMVAAQRLFSGIQNAGLEPDDTTYRSMIEGWGRVGNYKEAEWYYKELKRLG 180
Query: 442 FPPDQKAKNILLSL-AKTADERNEANEL 468
F P+ L++L A+ DE L
Sbjct: 181 FKPNSPNLYTLINLQAEHGDEEGACRTL 208
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 91/411 (22%), Positives = 174/411 (42%), Gaps = 37/411 (9%)
Query: 59 PKDLVLGTLVRLKQLKKWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKV 118
P G ++ L Q K WNV + +++S+ + + +IT Y + ++KAE+V
Sbjct: 9 PNVATFGMVMGLYQ-KGWNVEEAEFSFAQMRSFGIICQSAYSAMITIYTRLSLYDKAEEV 67
Query: 119 LSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVE 178
+ M ++ + L+ AY + G+ + AE + MQ + P+ + Y I++ + +
Sbjct: 68 IGLMRDDKVVLNLENWLVLLNAYSQQGKLEKAEQLLVAMQEAKFSPTIVAYNILITGYGK 127
Query: 179 ANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQS 238
A+ A+ +F + + + L+PD + MI + + G
Sbjct: 128 ASNMVAAQRLFSGI---QNAGLEPDDTTYRSMIEGWGRVG-------------------- 164
Query: 239 TVTYNSLMSFETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEML 298
NYKE Y +++R G +P+ + LIN + EE A ++ML
Sbjct: 165 ------------NYKEAEWYYKELKRLGFKPNSPNLYTLINLQAEHGDEEGACRTLDDML 212
Query: 299 DAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDME 358
G + + LL A+ G +D+ + K + + S + ++ AYV ++
Sbjct: 213 KIGCQYS-SILGTLLKAYEKVGRIDKIPFLLKGSFYQHVTVNQNSCSILVIAYVKNLLVD 271
Query: 359 GAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIM 418
A K K + V Y LI ++ +L+ ++IY M + +PN I T++
Sbjct: 272 EAIKLLGDKKWNDPVFEDNLYHLLICSCKELGHLDSAVKIYSLMPKSDDRPNLHISCTMI 331
Query: 419 DAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELL 469
D Y F+ Y +++S G D A +I++ + A +A +L
Sbjct: 332 DIYTTMGQFNEGEKLYMKLKSSGIGLDVIAFSIVIRMYVKAGSLKDACSVL 382
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 72/294 (24%), Positives = 134/294 (45%), Gaps = 16/294 (5%)
Query: 229 LMAERGVQQSTVTYNSLMSFET---NYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKAR 285
+M E GVQ + T+ +M N +E + QM+ G+ +Y+ +I Y +
Sbjct: 1 MMLELGVQPNVATFGMVMGLYQKGWNVEEAEFSFAQMRSFGIICQS-AYSAMITIYTRLS 59
Query: 286 REEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYT 345
++A V M D V + + +LL+A++ G +++A + M+ + SP I +Y
Sbjct: 60 LYDKAEEVIGLMRDDKVVLNLENWLVLLNAYSQQGKLEKAEQLLVAMQEAKFSPTIVAYN 119
Query: 346 TMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVN 405
+++ Y AS+M A++ F ++ G P+ TY ++I+G+ +V N ++ Y +++
Sbjct: 120 ILITGYGKASNMVAAQRLFSGIQNAGLEPDDTTYRSMIEGWGRVGNYKEAEWYYKELKRL 179
Query: 406 GIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEA 465
G KPN T+++ ++ D + A +M G +L + K
Sbjct: 180 GFKPNSPNLYTLINLQAEHGDEEGACRTLDDMLKIGCQYSSILGTLLKAYEKVGRIDKIP 239
Query: 466 NELLGNF-NHPN-NEPGINGLSIS------VDEE----DDDDDDDEDDDDNIYH 507
L G+F H N+ + L I+ VDE D +D +DN+YH
Sbjct: 240 FLLKGSFYQHVTVNQNSCSILVIAYVKNLLVDEAIKLLGDKKWNDPVFEDNLYH 293
Score = 75.5 bits (184), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 75/306 (24%), Positives = 139/306 (45%), Gaps = 25/306 (8%)
Query: 200 LKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETN---YKEVS 256
++P+ F M++ +Y+K E+A FA M G+ + Y+++++ T Y +
Sbjct: 7 VQPNVATFGMVMGLYQKGWNVEEAEFSFAQMRSFGIICQS-AYSAMITIYTRLSLYDKAE 65
Query: 257 KIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAF 316
++ M+ + ++ ++ +L+NAY + + E+A + M +A PT AYNIL+ +
Sbjct: 66 EVIGLMRDDKVVLNLENWLVLLNAYSQQGKLEKAEQLLVAMQEAKFSPTIVAYNILITGY 125
Query: 317 AISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNV 376
+ + A+ +F ++ PD +Y +M+ + + + AE +++ LK+ GF PN
Sbjct: 126 GKASNMVAAQRLFSGIQNAGLEPDDTTYRSMIEGWGRVGNYKEAEWYYKELKRLGFKPNS 185
Query: 377 ITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYK- 435
TLI A+ + E D M G + + +I T++ AY K D K
Sbjct: 186 PNLYTLINLQAEHGDEEGACRTLDDMLKIGCQYS-SILGTLLKAYEKVGRIDKIPFLLKG 244
Query: 436 --------EMESCGFPPDQKAKNILLSLAKTADERNEANELLGN--FNHPNNEPGINGLS 485
SC KN+L+ +EA +LLG+ +N P E + L
Sbjct: 245 SFYQHVTVNQNSCSILVIAYVKNLLV---------DEAIKLLGDKKWNDPVFEDNLYHLL 295
Query: 486 ISVDEE 491
I +E
Sbjct: 296 ICSCKE 301
>gi|147857775|emb|CAN80799.1| hypothetical protein VITISV_019809 [Vitis vinifera]
Length = 1099
Score = 142 bits (358), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 106/440 (24%), Positives = 193/440 (43%), Gaps = 18/440 (4%)
Query: 70 LKQLKKWNVVSEV----LEWLRIQ---SWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFM 122
L L K+ ++ E+ LE L Q + + FN M + Y K G+ +AE S +
Sbjct: 166 LMSLSKFLLIDEMKTVYLELLNNQISPNIYTFNAM-----VNGYCKIGNVVEAELYASKI 220
Query: 123 NKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKF 182
+ G P ++T+L+ + R NA +F M G + + ++Y ++ EA +
Sbjct: 221 VQAGLHPDTFTYTSLILGHCRNKGVDNAYEVFLIMPQKGCQRNEVSYTNLIHGLCEAGRI 280
Query: 183 KEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTY 242
EA ++F + ++ P + + ++IY +G +A LF M E+G + + TY
Sbjct: 281 NEALKLFADMTEDNCCP---TVRTYTVLIYALSGSGRKVEALNLFNEMKEKGCEPNVHTY 337
Query: 243 NSL---MSFETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLD 299
L + E E K+ +M GL P VV+Y LI+ Y K ++A + + M
Sbjct: 338 TVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYNALIDGYCKEGMIDDAFEILDLMES 397
Query: 300 AGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEG 359
P + YN L+ V +A + M + SP + +Y +++ +D+E
Sbjct: 398 NSCGPNTRTYNELICGLCKKRKVHKAMALLNKMLERKLSPSLITYNSLIHGQCKVNDLES 457
Query: 360 AEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMD 419
A + + ++G VP+ TY I K +E+ ++D ++ G+K N+ I+T ++D
Sbjct: 458 AYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFDSVKAKGVKANEVIYTALID 517
Query: 420 AYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEP 479
Y K D A + M + P+ N+L+ + EA+ L+ +P
Sbjct: 518 GYCKVGKIDVAYSLLERMLNDACLPNSYTYNVLIEGLCKEKKMKEASSLVAKMLTMGVKP 577
Query: 480 GINGLSISVDEEDDDDDDDE 499
+ +I + E D D
Sbjct: 578 TVVTYTILIGEMLKDGAFDH 597
Score = 142 bits (357), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 97/398 (24%), Positives = 176/398 (44%), Gaps = 6/398 (1%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
NE+ + LI + G N+A K+ + M + P+V ++T L+ A GR A +F
Sbjct: 263 NEVSYTNLIHGLCEAGRINEALKLFADMTEDNCCPTVRTYTVLIYALSGSGRKVEALNLF 322
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
M+ G P+ TY +++ + NK EA ++ L + + L P ++ +I Y
Sbjct: 323 NEMKEKGCEPNVHTYTVLIDGLCKENKMDEARKM---LSEMSEKGLIPSVVTYNALIDGY 379
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSK---IYDQMQRAGLQPDV 271
K G + A ++ LM +T TYN L+ ++V K + ++M L P +
Sbjct: 380 CKEGMIDDAFEILDLMESNSCGPNTRTYNELICGLCKKRKVHKAMALLNKMLERKLSPSL 439
Query: 272 VSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKC 331
++Y LI+ K E A + M + G+ P Y++ +D G V++A T+F
Sbjct: 440 ITYNSLIHGQCKVNDLESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFDS 499
Query: 332 MRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNN 391
++ + YT ++ Y ++ A R+ D +PN TY LI+G K
Sbjct: 500 VKAKGVKANEVIYTALIDGYCKVGKIDVAYSLLERMLNDACLPNSYTYNVLIEGLCKEKK 559
Query: 392 LEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNI 451
+++ + KM G+KP +T ++ K+ FD A+ + M S G+ PD
Sbjct: 560 MKEASSLVAKMLTMGVKPTVVTYTILIGEMLKDGAFDHALKVFNHMVSLGYQPDVCTYTA 619
Query: 452 LLSLAKTADERNEANELLGNFNHPNNEPGINGLSISVD 489
L + E ++++ N P + ++ +D
Sbjct: 620 FLHAYFSQGMLEEVDDVIAKMNEEGILPDLVTYTVLID 657
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 94/380 (24%), Positives = 175/380 (46%), Gaps = 16/380 (4%)
Query: 87 RIQSWWDFNEM----------DFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTA 136
++++ FNEM + +LI K+ ++A K+LS M++KG PSVV++ A
Sbjct: 315 KVEALNLFNEMKEKGCEPNVHTYTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYNA 374
Query: 137 LMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEE 196
L++ Y + G +A I M+S+ P+ TY ++ + K +A + +L+ +
Sbjct: 375 LIDGYCKEGMIDDAFEILDLMESNSCGPNTRTYNELICGLCKKRKVHKAMALLNKMLERK 434
Query: 197 KSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSL---MSFETNYK 253
L P ++ +I+ K E A +L +LM E G+ TY+ + E +
Sbjct: 435 ---LSPSLITYNSLIHGQCKVNDLESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVE 491
Query: 254 EVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILL 313
E ++D ++ G++ + V Y LI+ Y K + + A ++ E ML+ P YN+L+
Sbjct: 492 EAGTLFDSVKAKGVKANEVIYTALIDGYCKVGKIDVAYSLLERMLNDACLPNSYTYNVLI 551
Query: 314 DAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFV 373
+ + +A ++ M P + +YT ++ + + A K F + G+
Sbjct: 552 EGLCKEKKMKEASSLVAKMLTMGVKPTVVTYTILIGEMLKDGAFDHALKVFNHMVSLGYQ 611
Query: 374 PNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVW 433
P+V TY + Y LE++ ++ KM GI P+ +T ++D Y + A +
Sbjct: 612 PDVCTYTAFLHAYFSQGMLEEVDDVIAKMNEEGILPDLVTYTVLIDGYARLGLTHRAFDF 671
Query: 434 YKEMESCGFPPDQKAKNILL 453
K M G P +IL+
Sbjct: 672 LKCMVDTGCKPSLYIVSILI 691
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 88/327 (26%), Positives = 146/327 (44%), Gaps = 9/327 (2%)
Query: 153 IFRRMQSSGP---RPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHM 209
+FR+M + G +P+ Y IL + E + V++ LL+ + SP + F+
Sbjct: 143 VFRKMNADGEFKFKPTLRCYNTILMSLSKFLLIDEMKTVYLELLNNQISP---NIYTFNA 199
Query: 210 MIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSKIYDQ---MQRAG 266
M+ Y K G +A + + + G+ T TY SL+ K V Y+ M + G
Sbjct: 200 MVNGYCKIGNVVEAELYASKIVQAGLHPDTFTYTSLILGHCRNKGVDNAYEVFLIMPQKG 259
Query: 267 LQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQAR 326
Q + VSY LI+ +A R EAL +F +M + PT + Y +L+ A + SG +A
Sbjct: 260 CQRNEVSYTNLIHGLCEAGRINEALKLFADMTEDNCCPTVRTYTVLIYALSGSGRKVEAL 319
Query: 327 TVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGY 386
+F M+ C P++ +YT ++ + M+ A K + + G +P+V+TY LI GY
Sbjct: 320 NLFNEMKEKGCEPNVHTYTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYNALIDGY 379
Query: 387 AKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQ 446
K ++ EI D M N PN + ++ K + A+ +M P
Sbjct: 380 CKEGMIDDAFEILDLMESNSCGPNTRTYNELICGLCKKRKVHKAMALLNKMLERKLSPSL 439
Query: 447 KAKNILLSLAKTADERNEANELLGNFN 473
N L+ ++ A LL N
Sbjct: 440 ITYNSLIHGQCKVNDLESAYRLLSLMN 466
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 97/426 (22%), Positives = 184/426 (43%), Gaps = 40/426 (9%)
Query: 61 DLVLGTLVRLKQLKKWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLS 120
+L+ G + K K +++++LE S +N LI K D A ++LS
Sbjct: 409 ELICGLCKKRKVHKAMALLNKMLERKLSPSLITYNS-----LIHGQCKVNDLESAYRLLS 463
Query: 121 FMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEAN 180
MN+ G P +++ ++ + GR + A +F +++ G + + + Y ++ + +
Sbjct: 464 LMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFDSVKAKGVKANEVIYTALIDGYCKVG 523
Query: 181 KFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTV 240
K A + +L++ P+ ++++I K ++A L A M GV+ + V
Sbjct: 524 KIDVAYSLLERMLNDA---CLPNSYTYNVLIEGLCKEKKMKEASSLVAKMLTMGVKPTVV 580
Query: 241 TYNSL---MSFETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEM 297
TY L M + + K+++ M G QPDV +Y ++AY EE V +M
Sbjct: 581 TYTILIGEMLKDGAFDHALKVFNHMVSLGYQPDVCTYTAFLHAYFSQGMLEEVDDVIAKM 640
Query: 298 LDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLS-------- 349
+ G+ P Y +L+D +A G+ +A KCM C P + + ++
Sbjct: 641 NEEGILPDLVTYTVLIDGYARLGLTHRAFDFLKCMVDTGCKPSLYIVSILIKNLSHENRM 700
Query: 350 ------------AYVNASDM---------EGAEKFFRRLKQDGFVPNVITYGTLIKGYAK 388
+ VN+ D+ E A K F ++ + G +V YG LI G+ +
Sbjct: 701 KETRSEIGIDSVSNVNSVDIADVWKTLEYEIALKLFEKMVEHGCTIDVSIYGALIAGFCQ 760
Query: 389 VNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKA 448
LE+ + M+ G+ P++ I+ +++D K + AV M G P ++
Sbjct: 761 QERLEEAQGLVHHMKERGMSPSEDIYNSLLDCCCKLGVYAEAVRLVDAMVENGLLPLLES 820
Query: 449 KNILLS 454
+L+
Sbjct: 821 YKLLVC 826
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 79/341 (23%), Positives = 140/341 (41%), Gaps = 37/341 (10%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + +LI K+ +A +++ M G P+VV++T L+ + G + +A +F
Sbjct: 543 NSYTYNVLIEGLCKEKKMKEASSLVAKMLTMGVKPTVVTYTILIGEMLKDGAFDHALKVF 602
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
M S G +P TY L + +E ++V + +E + PD + ++I Y
Sbjct: 603 NHMVSLGYQPDVCTYTAFLHAYFSQGMLEEVDDVIAKMNEEG---ILPDLVTYTVLIDGY 659
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSL---MSFETNYKEVS--------------- 256
+ G +A M + G + S + L +S E KE
Sbjct: 660 ARLGLTHRAFDFLKCMVDTGCKPSLYIVSILIKNLSHENRMKETRSEIGIDSVSNVNSVD 719
Query: 257 --------------KIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGV 302
K++++M G DV Y LI + + R EEA + M + G+
Sbjct: 720 IADVWKTLEYEIALKLFEKMVEHGCTIDVSIYGALIAGFCQQERLEEAQGLVHHMKERGM 779
Query: 303 RPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSA-YVNASDMEGAE 361
P+ YN LLD G+ +A + M + P + SY ++ Y+ S+ E A+
Sbjct: 780 SPSEDIYNSLLDCCCKLGVYAEAVRLVDAMVENGLLPLLESYKLLVCGLYIEGSN-EKAK 838
Query: 362 KFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKM 402
F L G+ + + + LI G K + +++ E+ D M
Sbjct: 839 AVFHGLLSCGYNYDEVAWKVLIDGLLKRDLVDECSELIDIM 879
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 83/319 (26%), Positives = 132/319 (41%), Gaps = 43/319 (13%)
Query: 103 ITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGP 162
+ AY QG + + V++ MN++G P +V++T L++ Y R G A + M +G
Sbjct: 621 LHAYFSQGMLEEVDDVIAKMNEEGILPDLVTYTVLIDGYARLGLTHRAFDFLKCMVDTGC 680
Query: 163 RPSALTYQIILKLFVEANKFKEAE-----------------EVFMTLLDEEKSPLKPDQK 205
+PS I++K N+ KE +V+ TL E + LK +K
Sbjct: 681 KPSLYIVSILIKNLSHENRMKETRSEIGIDSVSNVNSVDIADVWKTL--EYEIALKLFEK 738
Query: 206 M-----------FHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETN--- 251
M + +I + + E+A+ L M ERG+ S YNSL+
Sbjct: 739 MVEHGCTIDVSIYGALIAGFCQQERLEEAQGLVHHMKERGMSPSEDIYNSLLDCCCKLGV 798
Query: 252 YKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNI 311
Y E ++ D M GL P + SY LL+ E+A AVF +L G A+ +
Sbjct: 799 YAEAVRLVDAMVENGLLPLLESYKLLVCGLYIEGSNEKAKAVFHGLLSCGYNYDEVAWKV 858
Query: 312 LLDAFAISGMVDQARTVFKCMRRDRCS--PDICSYTTMLSAYVNAS-------DMEGAEK 362
L+D +VD+ + M + DI M A N++ ++ G
Sbjct: 859 LIDGLLKRDLVDECSELIDIMEEKDATAQADIACAALMRLAAANSTKGALEDHELRGLSV 918
Query: 363 FFRRLKQ-DGFVPNVITYG 380
L Q G V N+I+ G
Sbjct: 919 NHGELTQLSGLVNNLISVG 937
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 57/281 (20%), Positives = 124/281 (44%), Gaps = 24/281 (8%)
Query: 243 NSLMSFETNYKEVSKIYDQMQ-RAGLQPDVVSYALLINAYGKARREEEA----------- 290
+SL +F + + ++ + R G + +V SY+ ++N +AR A
Sbjct: 72 SSLFAFNLDPQTALSFFNWIALRPGFKHNVHSYSSMLNILIRARLLGVAEKIRISMIKSC 131
Query: 291 ---------LAVFEEMLDAG---VRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCS 338
L VF +M G +PT + YN +L + + ++D+ +TV+ + ++ S
Sbjct: 132 CSIEDVLFVLEVFRKMNADGEFKFKPTLRCYNTILMSLSKFLLIDEMKTVYLELLNNQIS 191
Query: 339 PDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEI 398
P+I ++ M++ Y ++ AE + ++ Q G P+ TY +LI G+ + ++ E+
Sbjct: 192 PNIYTFNAMVNGYCKIGNVVEAELYASKIVQAGLHPDTFTYTSLILGHCRNKGVDNAYEV 251
Query: 399 YDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKT 458
+ M G + N+ +T ++ + + A+ + +M P + +L+
Sbjct: 252 FLIMPQKGCQRNEVSYTNLIHGLCEAGRINEALKLFADMTEDNCCPTVRTYTVLIYALSG 311
Query: 459 ADERNEANELLGNFNHPNNEPGINGLSISVDEEDDDDDDDE 499
+ + EA L EP ++ ++ +D ++ DE
Sbjct: 312 SGRKVEALNLFNEMKEKGCEPNVHTYTVLIDGLCKENKMDE 352
>gi|296087909|emb|CBI35192.3| unnamed protein product [Vitis vinifera]
Length = 1001
Score = 142 bits (358), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 95/390 (24%), Positives = 172/390 (44%), Gaps = 6/390 (1%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
+ +DF L+T+ K + + M+ G P V + ++ + R A +
Sbjct: 44 STVDFNRLLTSIAKTKHHSTLLSLSRQMDSFGIPPDVYTLAIVINSLCHLNRVDFAFSAL 103
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
++ G +P A T+ +++ K EA +F ++ E +P+ + +I
Sbjct: 104 AKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGEG---FQPNVVTYGTLINGL 160
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSL---MSFETNYKEVSKIYDQMQRAGLQPDV 271
K +A +F+ M +G+ + VTYNSL + +K V+ + ++M + + PDV
Sbjct: 161 CKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDV 220
Query: 272 VSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKC 331
+ +++A K EA V + M+ GV P YN L+D + VD A VF
Sbjct: 221 FTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDT 280
Query: 332 MRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNN 391
M C ++ SY T+++ Y ++ A F + + PN +TY TLI G V
Sbjct: 281 MVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGR 340
Query: 392 LEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNI 451
L+ + ++ +M G P+ + T+ D KN+ D A+ K +E + PD +
Sbjct: 341 LQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTT 400
Query: 452 LLSLAKTADERNEANELLGNFNHPNNEPGI 481
+L A E +A +L N + +P +
Sbjct: 401 ILDGMCRAGELEDARDLFSNLSSKGLQPNV 430
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 98/395 (24%), Positives = 164/395 (41%), Gaps = 41/395 (10%)
Query: 99 FLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQ 158
F LI +G +A + M +G+ P+VV++ L+ + + A IF M
Sbjct: 118 FTTLIRGLCVEGKIGEALHLFDKMIGEGFQPNVVTYGTLINGLCKDRQVTEAFNIFSEMI 177
Query: 159 SSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAG 218
+ G P+ +TY ++ + ++K + ++D S + PD + ++ K G
Sbjct: 178 TKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVD---SKIMPDVFTLNTVVDALCKEG 234
Query: 219 GYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVS---KIYDQMQRAGLQPDVVSYA 275
+A + +M RGV+ + VTYN+LM EV K++D M +V+SY
Sbjct: 235 MVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDCVANVISYN 294
Query: 276 LLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISG--------------- 320
LIN Y K + ++A+ +FEEM + P YN L+ G
Sbjct: 295 TLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISLFHEMVAR 354
Query: 321 --------------------MVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGA 360
+D+A + K + PDI YTT+L A ++E A
Sbjct: 355 GQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTILDGMCRAGELEDA 414
Query: 361 EKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDA 420
F L G PNV TY +I G K L + +++ +M NG PN + I
Sbjct: 415 RDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEMNKNGCSPNDCTYNLITRG 474
Query: 421 YGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSL 455
+ +N + + +EM + GF D +L+ +
Sbjct: 475 FLRNNEALRTIELLEEMLARGFSVDVSTTTLLVGM 509
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 93/383 (24%), Positives = 161/383 (42%), Gaps = 22/383 (5%)
Query: 112 FNKAEKVLSFMNKKGY---APSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALT 168
FN + LS N+ + PS V T L+ + + Y ++ +M S G P T
Sbjct: 559 FNTLDDALSSFNRMLHMHPPPSTVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYT 618
Query: 169 YQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFA 228
I++ F + A V LL K +PD + ++ G K
Sbjct: 619 LNILINSFCHLRRLGYAFSVLAKLL---KLGFQPDVVTYGTLM------NGLCK------ 663
Query: 229 LMAERGVQQSTVTYNSLMSFETN---YKEVSKIYDQMQRAGLQPDVVSYALLINAYGKAR 285
M +G+ TYNSL+ N +K V+ + ++M + + P+VV ++ +++A K
Sbjct: 664 -MITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDALCKEG 722
Query: 286 REEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYT 345
A V + M+ GV P Y L+D + +D+A VF M C P++ SY
Sbjct: 723 MIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYN 782
Query: 346 TMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVN 405
+++ Y M+ A ++ G + + +TY TLI G V L+ + ++ +M +
Sbjct: 783 ILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHEMVAS 842
Query: 406 GIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEA 465
G P+ + ++D KN A+V K +E D NI + A E A
Sbjct: 843 GQIPDLVTYRILLDYLCKNHHLAEAMVLLKAIEGSNLDADILVYNIAIDGMCRAGELEAA 902
Query: 466 NELLGNFNHPNNEPGINGLSISV 488
+L N + +P + +I +
Sbjct: 903 RDLFSNLSSKGLQPDVRTYNIMI 925
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 85/343 (24%), Positives = 148/343 (43%), Gaps = 17/343 (4%)
Query: 149 NAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFH 208
+A + F RM P PS + + KL K K V + + PD +
Sbjct: 564 DALSSFNRMLHMHPPPSTVDFT---KLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTLN 620
Query: 209 MMI--YMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSKIYDQMQRAG 266
++I + + + GY A + A + + G Q VTY +LM+ +M G
Sbjct: 621 ILINSFCHLRRLGY--AFSVLAKLLKLGFQPDVVTYGTLMNGLC----------KMITKG 668
Query: 267 LQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQAR 326
+ PD+ +Y LI+A + + EM+++ + P ++ ++DA GM+ A
Sbjct: 669 ISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDALCKEGMIAIAH 728
Query: 327 TVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGY 386
V M + PD+ +YT ++ + S+M+ A K F + G VPNV +Y LI GY
Sbjct: 729 DVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYNILINGY 788
Query: 387 AKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQ 446
++ ++K M + ++M + G+ + + T++ A+ + EM + G PD
Sbjct: 789 CQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHEMVASGQIPDL 848
Query: 447 KAKNILLSLAKTADERNEANELLGNFNHPNNEPGINGLSISVD 489
ILL EA LL N + I +I++D
Sbjct: 849 VTYRILLDYLCKNHHLAEAMVLLKAIEGSNLDADILVYNIAID 891
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 78/342 (22%), Positives = 144/342 (42%), Gaps = 21/342 (6%)
Query: 101 MLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSS 160
+LI ++ A VL+ + K G+ P VV++ LM +M +
Sbjct: 621 ILINSFCHLRRLGYAFSVLAKLLKLGFQPDVVTYGTLMNG-------------LCKMITK 667
Query: 161 GPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEE-KSPLKPDQKMFHMMIYMYKKAGG 219
G P TY ++ ++K TLL+E S + P+ +F ++ K G
Sbjct: 668 GISPDIFTYNSLIHALCNLCEWKHVT----TLLNEMVNSKIMPNVVVFSTVVDALCKEGM 723
Query: 220 YEKARKLFALMAERGVQQSTVTYNSLM---SFETNYKEVSKIYDQMQRAGLQPDVVSYAL 276
A + +M +RGV+ VTY +LM + E K++D M G P+V SY +
Sbjct: 724 IAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYNI 783
Query: 277 LINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDR 336
LIN Y + +R ++A+ + E+M G+ YN L+ G + A +F M
Sbjct: 784 LINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHEMVASG 843
Query: 337 CSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMM 396
PD+ +Y +L + A + ++ +++ Y I G + LE
Sbjct: 844 QIPDLVTYRILLDYLCKNHHLAEAMVLLKAIEGSNLDADILVYNIAIDGMCRAGELEAAR 903
Query: 397 EIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEME 438
+++ + G++P+ + ++ K D A +++M+
Sbjct: 904 DLFSNLSSKGLQPDVRTYNIMIHGLCKRGLLDEANKLFRKMD 945
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 91/469 (19%), Positives = 187/469 (39%), Gaps = 53/469 (11%)
Query: 30 NWRRLMNQIEEVG---SAVAVLRSERTRGQPLPKDLVLGTL----VRLKQLKKWNVVSEV 82
+ L++ + VG A+++ RGQ +P + TL + + L K + +
Sbjct: 327 TYNTLIHGLCHVGRLQDAISLFHEMVARGQ-IPDLVTYRTLSDYLCKNRHLDKAMALLKA 385
Query: 83 LEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYG 142
+E S WD + + ++ + G+ A + S ++ KG P+V ++ ++
Sbjct: 386 IE----GSNWDPDIQIYTTILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLC 441
Query: 143 RGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKP 202
+ G A +F M +G P+ TY +I + F+ N+ E+ +L S
Sbjct: 442 KQGLLAEASKLFSEMNKNGCSPNDCTYNLITRGFLRNNEALRTIELLEEMLARGFS---V 498
Query: 203 DQKMFHMMIYMYKKAGGYEKARKLFALMAE----RGVQQSTV-----------TYNSLMS 247
D +++ M G + +++ + G Q ++ ++
Sbjct: 499 DVSTTTLLVGMLSDDGLDQSVKQILCKPSSSSRPSGTQMRSLPPLFLSSSHNSLHSRSPH 558
Query: 248 FETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHK 307
F T +S +++M P V + L+ + K + L++ +M G+ P
Sbjct: 559 FNTLDDALSS-FNRMLHMHPPPSTVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVY 617
Query: 308 AYNILLDAF--------AISGMVDQARTVFK-------------C-MRRDRCSPDICSYT 345
NIL+++F A S + + F+ C M SPDI +Y
Sbjct: 618 TLNILINSFCHLRRLGYAFSVLAKLLKLGFQPDVVTYGTLMNGLCKMITKGISPDIFTYN 677
Query: 346 TMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVN 405
+++ A N + + + +PNV+ + T++ K + ++ D M
Sbjct: 678 SLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDALCKEGMIAIAHDVVDMMIKR 737
Query: 406 GIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLS 454
G++P+ +T +MD + + D AV + M G P+ ++ NIL++
Sbjct: 738 GVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYNILIN 786
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/265 (24%), Positives = 120/265 (45%), Gaps = 9/265 (3%)
Query: 70 LKQLKKWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAP 129
L L +W V+ +L + + S N + F ++ A K+G A V+ M K+G P
Sbjct: 683 LCNLCEWKHVTTLLNEM-VNSKIMPNVVVFSTVVDALCKEGMIAIAHDVVDMMIKRGVEP 741
Query: 130 SVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVF 189
VV++TALM+ + A +F M G P+ +Y I++ + + + +A
Sbjct: 742 DVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYNILINGYCQIQRMDKA---- 797
Query: 190 MTLLDE-EKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSF 248
M LL++ L D ++ +I+ G + A LF M G VTY L+ +
Sbjct: 798 MGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHEMVASGQIPDLVTYRILLDY 857
Query: 249 ET---NYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPT 305
+ E + ++ + L D++ Y + I+ +A E A +F + G++P
Sbjct: 858 LCKNHHLAEAMVLLKAIEGSNLDADILVYNIAIDGMCRAGELEAARDLFSNLSSKGLQPD 917
Query: 306 HKAYNILLDAFAISGMVDQARTVFK 330
+ YNI++ G++D+A +F+
Sbjct: 918 VRTYNIMIHGLCKRGLLDEANKLFR 942
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/264 (21%), Positives = 101/264 (38%), Gaps = 38/264 (14%)
Query: 221 EKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSKIYD---QMQRAGLQPDVVSYALL 277
++A F M + STV +N L++ K S + QM G+ PDV + A++
Sbjct: 27 DEALSTFNRMLHKQPPPSTVDFNRLLTSIAKTKHHSTLLSLSRQMDSFGIPPDVYTLAIV 86
Query: 278 INAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRC 337
IN+ R + A + ++L G +P + L+ + G + +
Sbjct: 87 INSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGE------------- 133
Query: 338 SPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMME 397
A F ++ +GF PNV+TYGTLI G K + +
Sbjct: 134 ----------------------ALHLFDKMIGEGFQPNVVTYGTLINGLCKDRQVTEAFN 171
Query: 398 IYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAK 457
I+ +M GI PN + +++ K ++ EM PD N ++
Sbjct: 172 IFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVVDALC 231
Query: 458 TADERNEANELLGNFNHPNNEPGI 481
EA++++ H EP +
Sbjct: 232 KEGMVAEAHDVVDMMIHRGVEPNV 255
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 46/203 (22%), Positives = 85/203 (41%), Gaps = 41/203 (20%)
Query: 101 MLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSS 160
+LI Y + +KA +L M+ +G V++ L+ GR ++A A+F M +S
Sbjct: 783 ILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHEMVAS 842
Query: 161 GPRPSALTYQIILKLFVEANKFKEAEEVFMTL----LDEE-------------------- 196
G P +TY+I+L + + EA + + LD +
Sbjct: 843 GQIPDLVTYRILLDYLCKNHHLAEAMVLLKAIEGSNLDADILVYNIAIDGMCRAGELEAA 902
Query: 197 --------KSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGV--------QQSTV 240
L+PD + +++MI+ K G ++A KLF M E + Q ++
Sbjct: 903 RDLFSNLSSKGLQPDVRTYNIMIHGLCKRGLLDEANKLFRKMDENDIWSNSTSSRNQKSL 962
Query: 241 TYNSLMSFETNYK-EVSKIYDQM 262
Y +M E + +S ++++M
Sbjct: 963 IYQKIMLPEIDLVYSISVMFEKM 985
>gi|147784915|emb|CAN72973.1| hypothetical protein VITISV_019486 [Vitis vinifera]
Length = 550
Score = 142 bits (358), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 104/410 (25%), Positives = 195/410 (47%), Gaps = 23/410 (5%)
Query: 89 QSWWDFNEM---------DFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALME 139
++W FNE F ++I + G +K +VL M + G +P+VV +T L++
Sbjct: 135 KAWRVFNETKGNVKLDVYSFGIMIKGCCEVGYLDKGFEVLGQMEEMGLSPNVVVYTTLID 194
Query: 140 AYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSP 199
+ G + + +F +M + TY +++ F + K+ E++ + + +
Sbjct: 195 GCCKNGDIERGKQLFYKMGELDVVANQYTYTVLINGFFKMGLKKDGIELYEKM---KLTG 251
Query: 200 LKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSL---MSFETNYKEVS 256
+ P+ ++ MI G A +LF M ERGV + VTYN+L + E E
Sbjct: 252 IVPNVYTYNSMICRCCNDGKLNNAFELFDEMRERGVACNVVTYNTLIGGLCQERRVLEAE 311
Query: 257 KIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAF 316
++ +M+R GL P+++SY LI+ Y ++A ++F +M +G P+ YNIL+ F
Sbjct: 312 RLMCRMKRDGLSPNLISYNTLIDGYCSIGNLDKASSLFNQMKSSGQSPSLATYNILIAGF 371
Query: 317 A----ISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGF 372
+ +G+ D R M SP +YT ++ A V + ++E A + + +++ G
Sbjct: 372 SEAKNSAGVTDMVRE----MEARGLSPSKVTYTILMDALVRSDNIEKAFQIYSSMEKAGL 427
Query: 373 VPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVV 432
V ++ YG LI G V ++++ +++ + +KPN I+ T++ Y K A+
Sbjct: 428 VADIYIYGVLIHGLCVVGDMKEASKLFKSLDEMHLKPNDVIYNTMIYGYCKEGSSYRALR 487
Query: 433 WYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGIN 482
KEM G P+ + N + + ++ EA LL + +P I+
Sbjct: 488 LLKEMGENGMVPNVASYNSTIXILCKDEKWTEAEVLLKDMIELGLKPSIS 537
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 95/391 (24%), Positives = 176/391 (45%), Gaps = 42/391 (10%)
Query: 127 YAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAE 186
+ V+ H A++ A+ R + A +M G P + T+ +L L +++N F++A
Sbjct: 78 FPTHVLIHEAIINAHVRSQLPEQALFYXNQMIGRGLVPGSNTFNNLLILLIKSNFFEKAW 137
Query: 187 EVFMTLLDEEKSPLKPDQKMFHMMI-------YMYK------------------------ 215
VF +E K +K D F +MI Y+ K
Sbjct: 138 RVF----NETKGNVKLDVYSFGIMIKGCCEVGYLDKGFEVLGQMEEMGLSPNVVVYTTLI 193
Query: 216 ----KAGGYEKARKLFALMAERGVQQSTVTYNSLMS--FETNYKEVS-KIYDQMQRAGLQ 268
K G E+ ++LF M E V + TY L++ F+ K+ ++Y++M+ G+
Sbjct: 194 DGCCKNGDIERGKQLFYKMGELDVVANQYTYTVLINGFFKMGLKKDGIELYEKMKLTGIV 253
Query: 269 PDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTV 328
P+V +Y +I + A +F+EM + GV YN L+ V +A +
Sbjct: 254 PNVYTYNSMICRCCNDGKLNNAFELFDEMRERGVACNVVTYNTLIGGLCQERRVLEAERL 313
Query: 329 FKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAK 388
M+RD SP++ SY T++ Y + +++ A F ++K G P++ TY LI G+++
Sbjct: 314 MCRMKRDGLSPNLISYNTLIDGYCSIGNLDKASSLFNQMKSSGQSPSLATYNILIAGFSE 373
Query: 389 VNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKA 448
N + ++ +M G+ P++ +T +MDA ++ + + A Y ME G D
Sbjct: 374 AKNSAGVTDMVREMEARGLSPSKVTYTILMDALVRSDNIEKAFQIYSSMEKAGLVADIYI 433
Query: 449 KNILLSLAKTADERNEANELLGNFNHPNNEP 479
+L+ + EA++L + + + +P
Sbjct: 434 YGVLIHGLCVVGDMKEASKLFKSLDEMHLKP 464
Score = 108 bits (271), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 78/329 (23%), Positives = 147/329 (44%), Gaps = 6/329 (1%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N+ + +LI + K G ++ M G P+V ++ +++ G+ NA +F
Sbjct: 220 NQYTYTVLINGFFKMGLKKDGIELYEKMKLTGIVPNVYTYNSMICRCCNDGKLNNAFELF 279
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
M+ G + +TY ++ + + EAE + + ++ L P+ ++ +I Y
Sbjct: 280 DEMRERGVACNVVTYNTLIGGLCQERRVLEAERLMCRM---KRDGLSPNLISYNTLIDGY 336
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSKIYD---QMQRAGLQPDV 271
G +KA LF M G S TYN L++ + K + + D +M+ GL P
Sbjct: 337 CSIGNLDKASSLFNQMKSSGQSPSLATYNILIAGFSEAKNSAGVTDMVREMEARGLSPSK 396
Query: 272 VSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKC 331
V+Y +L++A ++ E+A ++ M AG+ Y +L+ + G + +A +FK
Sbjct: 397 VTYTILMDALVRSDNIEKAFQIYSSMEKAGLVADIYIYGVLIHGLCVVGDMKEASKLFKS 456
Query: 332 MRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNN 391
+ P+ Y TM+ Y A + + + ++G VPNV +Y + I K
Sbjct: 457 LDEMHLKPNDVIYNTMIYGYCKEGSSYRALRLLKEMGENGMVPNVASYNSTIXILCKDEK 516
Query: 392 LEKMMEIYDKMRVNGIKPNQTIFTTIMDA 420
+ + M G+KP+ +I+ I A
Sbjct: 517 WTEAEVLLKDMIELGLKPSISIWNMISKA 545
>gi|357137687|ref|XP_003570431.1| PREDICTED: pentatricopeptide repeat-containing protein At5g14770,
mitochondrial-like [Brachypodium distachyon]
Length = 938
Score = 142 bits (358), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 99/380 (26%), Positives = 176/380 (46%), Gaps = 11/380 (2%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
L+ K G KAE + MN++G V++T L++ + G A + + +
Sbjct: 495 LVNGLKKNGKIEKAEALFREMNERGVLLDHVNYTTLIDGLFKTGNLPAAFKVGQELTEKN 554
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSP-LKPDQKMFHMMIYMYKKAGGY 220
P A+ Y + + K KEAE + L+E +S LKPDQ ++ MI + G
Sbjct: 555 LLPDAVVYNVFINCLCMLGKSKEAE----SFLEEMQSTGLKPDQVTYNTMIAAQSREGKT 610
Query: 221 EKARKLFALMAERGVQQSTVTYNSLMS--FETNYKEVSK-IYDQMQRAGLQPDVVSYALL 277
KA KL M ++ + +TY++L+ FE E +K + ++M +G P +++ +
Sbjct: 611 AKALKLLNGMKRSSIKPNLITYSTLIVGLFEAGAVEKAKYLLNEMSSSGFSPTSLTHRRV 670
Query: 278 INAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRC 337
+ A + RR + L + E M++AG+ YN L+ +GM +A V + M
Sbjct: 671 LQACSQGRRSDLILEIHEWMMNAGLCADITVYNTLVRVLCYNGMTRKAMVVLEEMSGRGI 730
Query: 338 SPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMME 397
+PD ++ ++ + + ++ A + ++ G PNV T+ TL+ G + +
Sbjct: 731 APDTITFNALILGHFKSGHLDNAFSTYDQMLYHGISPNVATFNTLLGGLESAGRIGESDM 790
Query: 398 IYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAK 457
+ ++M+ GI+P+ + ++ YGK + AV Y EM GF P N L+S
Sbjct: 791 VLNEMKKRGIEPSNLTYDILVTGYGKQSNKVEAVRLYCEMVGKGFLPKVSTYNALISDFS 850
Query: 458 TADERNEANELLGNFNHPNN 477
++A EL FN N
Sbjct: 851 KVGMMSQAKEL---FNEMQN 867
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 83/349 (23%), Positives = 169/349 (48%), Gaps = 8/349 (2%)
Query: 94 FNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPS--VVSHTALMEAYGRGGRYKNAE 151
F+ + ++ + G ++A + M + G VV +L++ Y + G + A
Sbjct: 135 FDAVTVNTVLVGLCRDGRVDRAAALAEVMVRGGGIGGLDVVGWNSLVDGYCKVGDMETAF 194
Query: 152 AIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMI 211
A+ RM++ G + Y ++ A + A ++ T+ ++ ++P+ + M I
Sbjct: 195 AVAERMKAQGVGVDVVGYNSLVAGLCRAGEVDAARDMVDTM---KRDGVEPNVVTYTMFI 251
Query: 212 YMYKKAGGYEKARKLFALMAERGVQQSTVTYNSL---MSFETNYKEVSKIYDQMQRAGLQ 268
Y + + A L+ M +GV VT ++L + + + E ++ +M++ G
Sbjct: 252 VEYCRRNAVDDAFSLYEEMVRKGVLPDVVTLSALVGGLCKDGRFSEAYALFREMEKIGAA 311
Query: 269 PDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTV 328
P+ V+Y +LI+ KA+R E+L++ E++ GV Y L+D G +D+A+ +
Sbjct: 312 PNHVTYCMLIDTLAKAQRGNESLSLLGEVVSRGVVMDLIMYTALMDWLCKEGKIDEAKDM 371
Query: 329 FKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAK 388
F+ D +P+ +YT ++ A A +++GAE+ +++ PNV+T+ ++I G K
Sbjct: 372 FRHALSDNHTPNGVTYTVLIDALCKAGNVDGAEQVLSEMEEKSISPNVVTFSSIINGLVK 431
Query: 389 VNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEM 437
+ K + +M+ GI PN + T++D K ++A+ Y EM
Sbjct: 432 RGWVGKATDYMREMKERGIDPNVVTYGTVIDGSFKCLGQEAALDVYHEM 480
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 86/364 (23%), Positives = 166/364 (45%), Gaps = 6/364 (1%)
Query: 94 FNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAI 153
+ +++ LI K G+ A KV + +K P V + + G+ K AE+
Sbjct: 522 LDHVNYTTLIDGLFKTGNLPAAFKVGQELTEKNLLPDAVVYNVFINCLCMLGKSKEAESF 581
Query: 154 FRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYM 213
MQS+G +P +TY ++ K +A ++ + ++S +KP+ + +I
Sbjct: 582 LEEMQSTGLKPDQVTYNTMIAAQSREGKTAKALKLLNGM---KRSSIKPNLITYSTLIVG 638
Query: 214 YKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKE---VSKIYDQMQRAGLQPD 270
+AG EKA+ L M+ G +++T+ ++ + + + +I++ M AGL D
Sbjct: 639 LFEAGAVEKAKYLLNEMSSSGFSPTSLTHRRVLQACSQGRRSDLILEIHEWMMNAGLCAD 698
Query: 271 VVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFK 330
+ Y L+ +A+ V EEM G+ P +N L+ SG +D A + +
Sbjct: 699 ITVYNTLVRVLCYNGMTRKAMVVLEEMSGRGIAPDTITFNALILGHFKSGHLDNAFSTYD 758
Query: 331 CMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVN 390
M SP++ ++ T+L +A + ++ +K+ G P+ +TY L+ GY K +
Sbjct: 759 QMLYHGISPNVATFNTLLGGLESAGRIGESDMVLNEMKKRGIEPSNLTYDILVTGYGKQS 818
Query: 391 NLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKN 450
N + + +Y +M G P + + ++ + K A + EM++ G P +
Sbjct: 819 NKVEAVRLYCEMVGKGFLPKVSTYNALISDFSKVGMMSQAKELFNEMQNRGVLPTSCTYD 878
Query: 451 ILLS 454
IL+S
Sbjct: 879 ILVS 882
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 103/423 (24%), Positives = 191/423 (45%), Gaps = 14/423 (3%)
Query: 46 AVLRSERTRGQP---LPKDLVLGTLVRLKQLKKWNVVSEVLEWLRIQSWWDFNEMDFLML 102
A+L RG P + + VL L R ++ + ++EV+ +R + + + L
Sbjct: 123 ALLAEMCKRGVPFDAVTVNTVLVGLCRDGRVDRAAALAEVM--VRGGGIGGLDVVGWNSL 180
Query: 103 ITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGP 162
+ Y K GD A V M +G VV + +L+ R G A + M+ G
Sbjct: 181 VDGYCKVGDMETAFAVAERMKAQGVGVDVVGYNSLVAGLCRAGEVDAARDMVDTMKRDGV 240
Query: 163 RPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEK 222
P+ +TY + + + N +A ++ ++ + + PD ++ K G + +
Sbjct: 241 EPNVVTYTMFIVEYCRRNAVDDAFSLYEEMV---RKGVLPDVVTLSALVGGLCKDGRFSE 297
Query: 223 ARKLFALMAERGVQQSTVTY----NSLMSFETNYKEVSKIYDQMQRAGLQPDVVSYALLI 278
A LF M + G + VTY ++L + + +S + + + R G+ D++ Y L+
Sbjct: 298 AYALFREMEKIGAAPNHVTYCMLIDTLAKAQRGNESLSLLGEVVSR-GVVMDLIMYTALM 356
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCS 338
+ K + +EA +F L P Y +L+DA +G VD A V M S
Sbjct: 357 DWLCKEGKIDEAKDMFRHALSDNHTPNGVTYTVLIDALCKAGNVDGAEQVLSEMEEKSIS 416
Query: 339 PDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEI 398
P++ +++++++ V + A + R +K+ G PNV+TYGT+I G K E +++
Sbjct: 417 PNVVTFSSIINGLVKRGWVGKATDYMREMKERGIDPNVVTYGTVIDGSFKCLGQEAALDV 476
Query: 399 YDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILL-SLAK 457
Y +M G++ N+ I ++++ KN + A ++EM G D L+ L K
Sbjct: 477 YHEMLCEGVEVNKFIVDSLVNGLKKNGKIEKAEALFREMNERGVLLDHVNYTTLIDGLFK 536
Query: 458 TAD 460
T +
Sbjct: 537 TGN 539
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 94/420 (22%), Positives = 181/420 (43%), Gaps = 35/420 (8%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + + M I Y ++ + A + M +KG P VV+ +AL+ + GR+ A A+F
Sbjct: 243 NVVTYTMFIVEYCRRNAVDDAFSLYEEMVRKGVLPDVVTLSALVGGLCKDGRFSEAYALF 302
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEA---------EEVFMTLL------------ 193
R M+ G P+ +TY +++ +A + E+ V M L+
Sbjct: 303 REMEKIGAAPNHVTYCMLIDTLAKAQRGNESLSLLGEVVSRGVVMDLIMYTALMDWLCKE 362
Query: 194 ---DEEKSPLK--------PDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTY 242
DE K + P+ + ++I KAG + A ++ + M E+ + + VT+
Sbjct: 363 GKIDEAKDMFRHALSDNHTPNGVTYTVLIDALCKAGNVDGAEQVLSEMEEKSISPNVVTF 422
Query: 243 NSLMSFETNYKEVSKIYD---QMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLD 299
+S+++ V K D +M+ G+ P+VV+Y +I+ K +E AL V+ EML
Sbjct: 423 SSIINGLVKRGWVGKATDYMREMKERGIDPNVVTYGTVIDGSFKCLGQEAALDVYHEMLC 482
Query: 300 AGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEG 359
GV + L++ +G +++A +F+ M D +YTT++ ++
Sbjct: 483 EGVEVNKFIVDSLVNGLKKNGKIEKAEALFREMNERGVLLDHVNYTTLIDGLFKTGNLPA 542
Query: 360 AEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMD 419
A K + L + +P+ + Y I + ++ ++M+ G+KP+Q + T++
Sbjct: 543 AFKVGQELTEKNLLPDAVVYNVFINCLCMLGKSKEAESFLEEMQSTGLKPDQVTYNTMIA 602
Query: 420 AYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEP 479
A + A+ M+ P+ + L+ A +A LL + P
Sbjct: 603 AQSREGKTAKALKLLNGMKRSSIKPNLITYSTLIVGLFEAGAVEKAKYLLNEMSSSGFSP 662
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 70/291 (24%), Positives = 128/291 (43%), Gaps = 8/291 (2%)
Query: 203 DQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLM---SFETNYKEVSKIY 259
D +++++ + + GG L A M +RGV VT N+++ + + +
Sbjct: 102 DTVSYNVVMSGFSEQGGLAP-EALLAEMCKRGVPFDAVTVNTVLVGLCRDGRVDRAAALA 160
Query: 260 DQMQRAGL--QPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFA 317
+ M R G DVV + L++ Y K E A AV E M GV YN L+
Sbjct: 161 EVMVRGGGIGGLDVVGWNSLVDGYCKVGDMETAFAVAERMKAQGVGVDVVGYNSLVAGLC 220
Query: 318 ISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVI 377
+G VD AR + M+RD P++ +YT + Y + ++ A + + + G +P+V+
Sbjct: 221 RAGEVDAARDMVDTMKRDGVEPNVVTYTMFIVEYCRRNAVDDAFSLYEEMVRKGVLPDVV 280
Query: 378 TYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEM 437
T L+ G K + ++ +M G PN + ++D K + + ++ E+
Sbjct: 281 TLSALVGGLCKDGRFSEAYALFREMEKIGAAPNHVTYCMLIDTLAKAQRGNESLSLLGEV 340
Query: 438 ESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGINGLSISV 488
S G D L+ + +EA ++ + N+ P NG++ +V
Sbjct: 341 VSRGVVMDLIMYTALMDWLCKEGKIDEAKDMFRHALSDNHTP--NGVTYTV 389
>gi|356497651|ref|XP_003517673.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39710-like [Glycine max]
Length = 827
Score = 142 bits (358), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 111/469 (23%), Positives = 212/469 (45%), Gaps = 50/469 (10%)
Query: 35 MNQIEEVGSAVAVLRSERTRGQPLPK----DLVLGTLVRLKQLKKWNVVSEVLEWLRIQS 90
+ ++ V +A+ ++R+ QPL D++ G R + + V+ E+ +
Sbjct: 366 LCKVGNVEAALMLIRNLHYTNQPLNSHSFNDVIYGFCKRGEVFEALQVLEEMKSSGILPD 425
Query: 91 WWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNA 150
+ ++ +LI A+ +GD K ++ M PS+VS+T+L+ + +NA
Sbjct: 426 VYSYS-----ILINAFCGKGDVMKCLDLMEEMEHSQIKPSIVSYTSLIHGLCKKNMLQNA 480
Query: 151 EAIFRRMQSSGPR-----------------------------------PSALTYQIILKL 175
IF + +S + P+A + + +++
Sbjct: 481 VDIFHSIGASSCKYDSTVYETLIDGFCMQGDMDSAIKLLEEMICNELVPTAFSCRSLIRG 540
Query: 176 FVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGV 235
+ + F +A EVF +L + + PD + ++ +AG +++A L E G
Sbjct: 541 YYKLGLFDQALEVFNAML---RDGIWPDTIACNYILDGSCRAGYFKEALTLLEDFQEHGF 597
Query: 236 QQSTVTYNSLMS--FETNYKEVS-KIYDQMQRAGLQPDVVSYALLINAYGKARREEEALA 292
+ +YN+++ + Y E + ++ +M + + P VV+Y+ LI+ + K + A+
Sbjct: 598 NLNPHSYNAIIYKLCKEGYPERALELLPRMLKRNVLPSVVNYSTLISGFAKQSNFKRAVN 657
Query: 293 VFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYV 352
+F M+ G+ Y IL+ F+ S + +A +FK M+ D SYTT++ +
Sbjct: 658 LFTRMVKVGITFNIATYTILMSIFSHSHKMHEAYGIFKEMKERGLCLDQISYTTLIVGFC 717
Query: 353 NASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQT 412
N +M+ A F + ++G PNVITY +I G+ K N ++ ++DKM + + P+
Sbjct: 718 NNREMKKAWALFEEMSREGCSPNVITYTCIIDGFCKSNRIDLATWVFDKMNRDSVIPDVV 777
Query: 413 IFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADE 461
+T ++D Y K+ FD A Y M+ G PD N+L A T E
Sbjct: 778 TYTVLIDWYHKHGYFDQAHKLYDVMKDKGVLPDDITHNVLGLKAGTVQE 826
Score = 111 bits (278), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 84/369 (22%), Positives = 155/369 (42%), Gaps = 15/369 (4%)
Query: 99 FLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQ 158
F +LI+ + A V S G P + + L++ R + +F ++
Sbjct: 250 FDVLISVFASNSMLENALDVFSNAKHVGLEPDIRTCNFLLKCLVEANRVEFVRRVFEELK 309
Query: 159 SSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDE-EKSPLKPDQKMFHMMIYMYKKA 217
GP P+ TY I++ + +L + +S KP + I+ K
Sbjct: 310 DRGPSPNIYTYTIMMNFYCSDVGCDAGMRQAAVILGKIYRSGEKPTVVTYSTYIHGLCKV 369
Query: 218 GGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYK--------EVSKIYDQMQRAGLQP 269
G E A LM R + + NS + Y E ++ ++M+ +G+ P
Sbjct: 370 GNVEAA-----LMLIRNLHYTNQPLNSHSFNDVIYGFCKRGEVFEALQVLEEMKSSGILP 424
Query: 270 DVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVF 329
DV SY++LINA+ + L + EEM + ++P+ +Y L+ M+ A +F
Sbjct: 425 DVYSYSILINAFCGKGDVMKCLDLMEEMEHSQIKPSIVSYTSLIHGLCKKNMLQNAVDIF 484
Query: 330 KCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKV 389
+ C D Y T++ + DM+ A K + + VP + +LI+GY K+
Sbjct: 485 HSIGASSCKYDSTVYETLIDGFCMQGDMDSAIKLLEEMICNELVPTAFSCRSLIRGYYKL 544
Query: 390 NNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAK 449
++ +E+++ M +GI P+ I+D + F A+ ++ + GF + +
Sbjct: 545 GLFDQALEVFNAMLRDGIWPDTIACNYILDGSCRAGYFKEALTLLEDFQEHGFNLNPHSY 604
Query: 450 N-ILLSLAK 457
N I+ L K
Sbjct: 605 NAIIYKLCK 613
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 86/415 (20%), Positives = 164/415 (39%), Gaps = 47/415 (11%)
Query: 93 DFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAY----GRGGRYK 148
D +FL+ + +F +V + +G +P++ ++T +M Y G +
Sbjct: 281 DIRTCNFLLKCLVEANRVEF--VRRVFEELKDRGPSPNIYTYTIMMNFYCSDVGCDAGMR 338
Query: 149 NAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFH 208
A I ++ SG +P+ +TY + + EA + + L PL + F+
Sbjct: 339 QAAVILGKIYRSGEKPTVVTYSTYIHGLCKVGNV-EAALMLIRNLHYTNQPL--NSHSFN 395
Query: 209 MMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSKIYD---QMQRA 265
+IY + K G +A ++ M G+ +Y+ L++ +V K D +M+ +
Sbjct: 396 DVIYGFCKRGEVFEALQVLEEMKSSGILPDVYSYSILINAFCGKGDVMKCLDLMEEMEHS 455
Query: 266 GLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISG----- 320
++P +VSY LI+ K + A+ +F + + + Y L+D F + G
Sbjct: 456 QIKPSIVSYTSLIHGLCKKNMLQNAVDIFHSIGASSCKYDSTVYETLIDGFCMQGDMDSA 515
Query: 321 ------------------------------MVDQARTVFKCMRRDRCSPDICSYTTMLSA 350
+ DQA VF M RD PD + +L
Sbjct: 516 IKLLEEMICNELVPTAFSCRSLIRGYYKLGLFDQALEVFNAMLRDGIWPDTIACNYILDG 575
Query: 351 YVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPN 410
A + A ++ GF N +Y +I K E+ +E+ +M + P+
Sbjct: 576 SCRAGYFKEALTLLEDFQEHGFNLNPHSYNAIIYKLCKEGYPERALELLPRMLKRNVLPS 635
Query: 411 QTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEA 465
++T++ + K +F AV + M G + IL+S+ + + +EA
Sbjct: 636 VVNYSTLISGFAKQSNFKRAVNLFTRMVKVGITFNIATYTILMSIFSHSHKMHEA 690
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 100/225 (44%), Gaps = 9/225 (4%)
Query: 261 QMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISG 320
++R+G+ DV LI+ + E AL VF G+ P + N LL +
Sbjct: 242 HVERSGVVFDV-----LISVFASNSMLENALDVFSNAKHVGLEPDIRTCNFLLKCLVEAN 296
Query: 321 MVDQARTVFKCMRRDRCSPDICSYTTMLSAYVN----ASDMEGAEKFFRRLKQDGFVPNV 376
V+ R VF+ ++ SP+I +YT M++ Y + + M A ++ + G P V
Sbjct: 297 RVEFVRRVFEELKDRGPSPNIYTYTIMMNFYCSDVGCDAGMRQAAVILGKIYRSGEKPTV 356
Query: 377 ITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKE 436
+TY T I G KV N+E + + + N F ++ + K + A+ +E
Sbjct: 357 VTYSTYIHGLCKVGNVEAALMLIRNLHYTNQPLNSHSFNDVIYGFCKRGEVFEALQVLEE 416
Query: 437 MESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGI 481
M+S G PD + +IL++ + + +L+ H +P I
Sbjct: 417 MKSSGILPDVYSYSILINAFCGKGDVMKCLDLMEEMEHSQIKPSI 461
>gi|326510773|dbj|BAJ91734.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 711
Score = 142 bits (358), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 94/358 (26%), Positives = 167/358 (46%), Gaps = 11/358 (3%)
Query: 129 PSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEV 188
P++ ++ +M R R + A F R+ +G + +LK + +A +V
Sbjct: 6 PTIFTYGVVMNGCCRARRPELGLAFFGRLLRTGLKADKTAANTVLKCLCCTKRTDDAVKV 65
Query: 189 FMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMA-ERGVQQS-TVTYNSLM 246
+ + E PD + +++ ++A L +MA E GV VTYN+++
Sbjct: 66 LLRRMTELGCV--PDAFSYAIVLKRLCDDNRSQQALDLLRMMAKEEGVCSPDVVTYNTVI 123
Query: 247 SF---ETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVR 303
E + +Y +M + G PDVV++ +INA KAR + A + +M+D GV
Sbjct: 124 HGFFKEGKIGKACNLYHEMMQQGFVPDVVTHNSIINALCKARAVDNAELLLRQMVDNGVP 183
Query: 304 PTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKF 363
P Y ++ ++ G ++A +F+ M PDI S+ + + + + A +
Sbjct: 184 PNKVTYTSMIHGYSTLGRWEEATKMFREMTGRGLIPDIVSWNSFMDSLCKHGRSKEAAEI 243
Query: 364 FRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGK 423
F + G PN++TYG L+ GYA MM ++ M+ +GI N +FT ++DAY K
Sbjct: 244 FYSMAAKGHRPNIVTYGILLHGYATEGCFADMMSFFNTMKGDGIVANCLVFTILIDAYAK 303
Query: 424 NKDFDSAVVWYKEMESCGFPPDQKAKNILLS----LAKTADERNEANELLGNFNHPNN 477
D A++ EM+ G PD + L+S + + AD ++ N+++G PN
Sbjct: 304 RGMMDEAMLILSEMQGQGLSPDVFTYSTLISALCRMGRLADAVDKFNQMIGTGVQPNT 361
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 116/495 (23%), Positives = 209/495 (42%), Gaps = 52/495 (10%)
Query: 23 ADEAGKKNWRRLMNQIEEVGSAVAVLRSERTRGQPLPKDLVLGTLVRLKQLKKWNVVSEV 82
AD+ + + + AV VL T +P + LK+L N +
Sbjct: 41 ADKTAANTVLKCLCCTKRTDDAVKVLLRRMTELGCVPD--AFSYAIVLKRLCDDNRSQQA 98
Query: 83 LEWLRI----QSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALM 138
L+ LR+ + + + + +I + K+G KA + M ++G+ P VV+H +++
Sbjct: 99 LDLLRMMAKEEGVCSPDVVTYNTVIHGFFKEGKIGKACNLYHEMMQQGFVPDVVTHNSII 158
Query: 139 EAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKS 198
A + NAE + R+M +G P+ +TY ++ + +++EA ++F +
Sbjct: 159 NALCKARAVDNAELLLRQMVDNGVPPNKVTYTSMIHGYSTLGRWEEATKMFREMTGRG-- 216
Query: 199 PLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSL------------- 245
L PD ++ + K G ++A ++F MA +G + + VTY L
Sbjct: 217 -LIPDIVSWNSFMDSLCKHGRSKEAAEIFYSMAAKGHRPNIVTYGILLHGYATEGCFADM 275
Query: 246 MSFETNYK-------------------------EVSKIYDQMQRAGLQPDVVSYALLINA 280
MSF K E I +MQ GL PDV +Y+ LI+A
Sbjct: 276 MSFFNTMKGDGIVANCLVFTILIDAYAKRGMMDEAMLILSEMQGQGLSPDVFTYSTLISA 335
Query: 281 YGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISG-MVDQARTVFKCMRRDRCSP 339
+ R +A+ F +M+ GV+P Y+ L+ F G +V V++ M P
Sbjct: 336 LCRMGRLADAVDKFNQMIGTGVQPNTVVYHSLIQGFCTHGDLVKAKELVYEMMNNGIPRP 395
Query: 340 DICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIY 399
+I + +++ + + A F +K G ++I + TLI GY V + K +
Sbjct: 396 NIAFFNSIVHSICKEGRVMDAHHIFDLVKDIGERSDIIMFNTLIDGYCLVGEMGKAFSVL 455
Query: 400 DKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILL----SL 455
D M GI P+ + T+++ Y K+ D + ++EM P NI+L
Sbjct: 456 DAMISAGIGPDTFTYNTLVNGYFKSGRIDDGLNLFREMSDKKIKPTTVTYNIILDGLFRA 515
Query: 456 AKTADERNEANELLG 470
+T + +E++G
Sbjct: 516 GRTVAAQKMLHEMIG 530
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 95/366 (25%), Positives = 169/366 (46%), Gaps = 45/366 (12%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + F +LI AY K+G ++A +LS M +G +P V +++ L+ A R GR +A F
Sbjct: 290 NCLVFTILIDAYAKRGMMDEAMLILSEMQGQGLSPDVFTYSTLISALCRMGRLADAVDKF 349
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
+M +G +P+ + Y +++ F +A+E+ +++ +P+ F+ +++
Sbjct: 350 NQMIGTGVQPNTVVYHSLIQGFCTHGDLVKAKELVYEMMNNGIP--RPNIAFFNSIVHSI 407
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSK---IYDQMQRAGLQPDV 271
K G A +F L+ + G + + +N+L+ E+ K + D M AG+ PD
Sbjct: 408 CKEGRVMDAHHIFDLVKDIGERSDIIMFNTLIDGYCLVGEMGKAFSVLDAMISAGIGPDT 467
Query: 272 VSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISG----------- 320
+Y L+N Y K+ R ++ L +F EM D ++PT YNI+LD +G
Sbjct: 468 FTYNTLVNGYFKSGRIDDGLNLFREMSDKKIKPTTVTYNIILDGLFRAGRTVAAQKMLHE 527
Query: 321 MVDQARTV--------FKCMRRDRCSP----------------DICSYTTMLSAYVNASD 356
M+ TV K + R+ C+ +I + TM+++
Sbjct: 528 MIGCGTTVSLPTYNIILKGLCRNNCTDEAIVMFQKLCTMNVKFNITTLNTMINSMYTVQR 587
Query: 357 MEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKP-----NQ 411
E A+ F + G VPN TYG +I+ K ++E+ ++ M +G P N
Sbjct: 588 REEAKDLFSAISDSGLVPNASTYGIMIRNLLKEGSVEEADNMFSSMEKSGCAPCSRLLND 647
Query: 412 TIFTTI 417
TI T +
Sbjct: 648 TIRTLL 653
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 93/444 (20%), Positives = 181/444 (40%), Gaps = 36/444 (8%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N++ + +I Y G + +A K+ M +G P +VS + M++ + GR K A IF
Sbjct: 185 NKVTYTSMIHGYSTLGRWEEATKMFREMTGRGLIPDIVSWNSFMDSLCKHGRSKEAAEIF 244
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTL---------------------- 192
M + G RP+ +TY I+L + F + F T+
Sbjct: 245 YSMAAKGHRPNIVTYGILLHGYATEGCFADMMSFFNTMKGDGIVANCLVFTILIDAYAKR 304
Query: 193 --LDE--------EKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTY 242
+DE + L PD + +I + G A F M GVQ +TV Y
Sbjct: 305 GMMDEAMLILSEMQGQGLSPDVFTYSTLISALCRMGRLADAVDKFNQMIGTGVQPNTVVY 364
Query: 243 NSLMSFETNYKEVSK----IYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEML 298
+SL+ + ++ K +Y+ M +P++ + ++++ K R +A +F+ +
Sbjct: 365 HSLIQGFCTHGDLVKAKELVYEMMNNGIPRPNIAFFNSIVHSICKEGRVMDAHHIFDLVK 424
Query: 299 DAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDME 358
D G R +N L+D + + G + +A +V M PD +Y T+++ Y + ++
Sbjct: 425 DIGERSDIIMFNTLIDGYCLVGEMGKAFSVLDAMISAGIGPDTFTYNTLVNGYFKSGRID 484
Query: 359 GAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIM 418
FR + P +TY ++ G + ++ +M G + + I+
Sbjct: 485 DGLNLFREMSDKKIKPTTVTYNIILDGLFRAGRTVAAQKMLHEMIGCGTTVSLPTYNIIL 544
Query: 419 DAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNE 478
+N D A+V ++++ + + N +++ T R EA +L +
Sbjct: 545 KGLCRNNCTDEAIVMFQKLCTMNVKFNITTLNTMINSMYTVQRREEAKDLFSAISDSGLV 604
Query: 479 PGINGLSISVDEEDDDDDDDEDDD 502
P + I + + +E D+
Sbjct: 605 PNASTYGIMIRNLLKEGSVEEADN 628
Score = 85.5 bits (210), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 54/227 (23%), Positives = 105/227 (46%), Gaps = 5/227 (2%)
Query: 259 YDQMQRAGLQPDVVSYALLINAYGKARREEEALAVF-EEMLDAGVRPTHKAYNILLDAFA 317
+ ++ R GL+ D + ++ +R ++A+ V M + G P +Y I+L
Sbjct: 31 FGRLLRTGLKADKTAANTVLKCLCCTKRTDDAVKVLLRRMTELGCVPDAFSYAIVLKRLC 90
Query: 318 ISGMVDQARTVFKCMRRDR--CSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPN 375
QA + + M ++ CSPD+ +Y T++ + + A + + Q GFVP+
Sbjct: 91 DDNRSQQALDLLRMMAKEEGVCSPDVVTYNTVIHGFFKEGKIGKACNLYHEMMQQGFVPD 150
Query: 376 VITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYK 435
V+T+ ++I K ++ + +M NG+ PN+ +T+++ Y ++ A ++
Sbjct: 151 VVTHNSIINALCKARAVDNAELLLRQMVDNGVPPNKVTYTSMIHGYSTLGRWEEATKMFR 210
Query: 436 EMESCGFPPDQKAKNILL-SLAKTADERNEANELLGNFNHPNNEPGI 481
EM G PD + N + SL K + EA E+ + + P I
Sbjct: 211 EMTGRGLIPDIVSWNSFMDSLCKHGRSK-EAAEIFYSMAAKGHRPNI 256
>gi|302815701|ref|XP_002989531.1| hypothetical protein SELMODRAFT_130008 [Selaginella moellendorffii]
gi|300142709|gb|EFJ09407.1| hypothetical protein SELMODRAFT_130008 [Selaginella moellendorffii]
Length = 436
Score = 142 bits (358), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 102/418 (24%), Positives = 191/418 (45%), Gaps = 22/418 (5%)
Query: 69 RLKQLKKWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYA 128
RL+Q+K EV + + +++ + + +LI+ K G+F++A K+L M K +
Sbjct: 25 RLEQVK------EVYQGM-VEAGYTLRASGYGILISCLCKVGNFDEAYKLLHTMRLKRFK 77
Query: 129 PSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEV 188
++++ ++ + R + A + +M P P ALTY I++ K K ++
Sbjct: 78 RKAIAYSTIINWLCKLNRVEEARELIEKMARYAP-PDALTYGPIVERLC---KTKRIDDA 133
Query: 189 FMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMS- 247
T+ + +KPD +++ ++ + E+AR LF M ++ + + VTYN+L++
Sbjct: 134 LATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEEARLLFEKMVKQRINPNVVTYNTLING 193
Query: 248 ------FETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAG 301
ET Y+ ++ +M G P VSY LI+ + K + A VF++M+ +
Sbjct: 194 LCKAWRIETAYE----LFKEMAGKGYVPTEVSYNTLIDGFCKKKDLVAAKDVFDKMVRSN 249
Query: 302 VRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAE 361
P Y L+D + SG V A V M + +P++ +Y+ ++ + ++ A
Sbjct: 250 CVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVTPNVATYSCLIDGFCKVRRVDEAH 309
Query: 362 KFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAY 421
K ++ G P V+TY L+ + + LE +++ M P + T++ A
Sbjct: 310 KLLEQMVTQGIAPTVVTYNILLNSLCRADKLEDAFKLFRGMAQRRCHPTVVTYNTLLRAL 369
Query: 422 GKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEP 479
+K D A Y EM + G PPD + L A + +EA EL+ P
Sbjct: 370 CHHKQLDGAHRLYAEMIAKGCPPDAITYDTLAWGLTRAGKVHEAQELMEKMKLTKRNP 427
Score = 125 bits (315), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 77/309 (24%), Positives = 155/309 (50%), Gaps = 7/309 (2%)
Query: 164 PSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKA 223
P A T+ + F +A + ++ +EV+ ++ E L+ + ++I K G +++A
Sbjct: 8 PGAATFNTVADGFAKAGRLEQVKEVYQGMV-EAGYTLRASG--YGILISCLCKVGNFDEA 64
Query: 224 RKLFALMAERGVQQSTVTYNSLMSFETNY---KEVSKIYDQMQRAGLQPDVVSYALLINA 280
KL M + ++ + Y++++++ +E ++ ++M R PD ++Y ++
Sbjct: 65 YKLLHTMRLKRFKRKAIAYSTIINWLCKLNRVEEARELIEKMARYA-PPDALTYGPIVER 123
Query: 281 YGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPD 340
K +R ++ALA EEM G++P YN +L V++AR +F+ M + R +P+
Sbjct: 124 LCKTKRIDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEEARLLFEKMVKQRINPN 183
Query: 341 ICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYD 400
+ +Y T+++ A +E A + F+ + G+VP ++Y TLI G+ K +L +++D
Sbjct: 184 VVTYNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLIDGFCKKKDLVAAKDVFD 243
Query: 401 KMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTAD 460
KM + PN +TT++D K+ +A M G P+ + L+
Sbjct: 244 KMVRSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVTPNVATYSCLIDGFCKVR 303
Query: 461 ERNEANELL 469
+EA++LL
Sbjct: 304 RVDEAHKLL 312
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 84/356 (23%), Positives = 157/356 (44%), Gaps = 7/356 (1%)
Query: 129 PSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEV 188
P + + + + + GR + + +++ M +G A Y I++ + F EA ++
Sbjct: 8 PGAATFNTVADGFAKAGRLEQVKEVYQGMVEAGYTLRASGYGILISCLCKVGNFDEAYKL 67
Query: 189 FMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSF 248
T+ + K + +I K E+AR+L MA R +TY ++
Sbjct: 68 LHTMRLKR---FKRKAIAYSTIINWLCKLNRVEEARELIEKMA-RYAPPDALTYGPIVER 123
Query: 249 ETNYKEVS---KIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPT 305
K + ++M G++PD Y +++ + + EEA +FE+M+ + P
Sbjct: 124 LCKTKRIDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEEARLLFEKMVKQRINPN 183
Query: 306 HKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFR 365
YN L++ + ++ A +FK M P SY T++ + D+ A+ F
Sbjct: 184 VVTYNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLIDGFCKKKDLVAAKDVFD 243
Query: 366 RLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNK 425
++ + VPNV+TY TLI G +K ++ E+ D M G+ PN ++ ++D + K +
Sbjct: 244 KMVRSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVTPNVATYSCLIDGFCKVR 303
Query: 426 DFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGI 481
D A ++M + G P NILL+ AD+ +A +L P +
Sbjct: 304 RVDEAHKLLEQMVTQGIAPTVVTYNILLNSLCRADKLEDAFKLFRGMAQRRCHPTV 359
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 74/168 (44%), Gaps = 2/168 (1%)
Query: 302 VRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAE 361
V P +N + D FA +G ++Q + V++ M + Y ++S + + A
Sbjct: 6 VIPGAATFNTVADGFAKAGRLEQVKEVYQGMVEAGYTLRASGYGILISCLCKVGNFDEAY 65
Query: 362 KFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAY 421
K ++ F I Y T+I K+N +E+ E+ +KM P+ + I++
Sbjct: 66 KLLHTMRLKRFKRKAIAYSTIINWLCKLNRVEEARELIEKM-ARYAPPDALTYGPIVERL 124
Query: 422 GKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELL 469
K K D A+ +EM + G PD N +LS +E+ E LL
Sbjct: 125 CKTKRIDDALATVEEMATRGIKPDAFIYNFVLS-GLCQEEKVEEARLL 171
>gi|346703131|emb|CBX25230.1| hypothetical_protein [Oryza brachyantha]
Length = 746
Score = 142 bits (358), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 91/378 (24%), Positives = 176/378 (46%), Gaps = 12/378 (3%)
Query: 75 KWNVVSEVLEWLR--IQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVV 132
K V + L +++ I + ++ +++ + + + G A KV+ M ++G+ P V
Sbjct: 267 KLGRVEDALGYIQQEIANGFEPDQITYNTFVNGLCQNGHVGHALKVMDVMVQEGHDPDVF 326
Query: 133 SHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVF--M 190
++ ++ + G+ + A+ I +M G P T+ ++ N+ +EA ++ +
Sbjct: 327 TYNIVVNCLCKNGQLEEAKGILNQMVERGCLPDITTFNTLIVALCSGNRLEEALDLARQV 386
Query: 191 TLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFET 250
TL L PD F+++I K G + A +LF M G VTYN+L+
Sbjct: 387 TL-----KGLSPDVYTFNILINALCKVGDPQLALRLFEEMKSSGCTPDEVTYNTLIDNLC 441
Query: 251 NYKEVSKIYD---QMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHK 307
+ ++ K D +M+ AG V+Y +I+ K R EEA VF++M G+
Sbjct: 442 SLGKLGKALDLLKEMESAGCPRSTVTYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAI 501
Query: 308 AYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRL 367
+N L+D +D A + M + P+ +Y ++L+ Y D++ A + +
Sbjct: 502 TFNTLIDGLCKDKRIDDANQLISQMISEGLQPNNITYNSILTHYCKQGDIKKAADILQTM 561
Query: 368 KQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDF 427
+GF +V+TYGTLI G K + +++ MR+ G++ + ++ + + +
Sbjct: 562 TANGFEVDVVTYGTLINGLCKAGRTQVALKLLRGMRIKGMRATPKAYNPVIQSLFRRNNT 621
Query: 428 DSAVVWYKEMESCGFPPD 445
A+ ++EM G PPD
Sbjct: 622 RDAMNLFREMTEVGEPPD 639
Score = 141 bits (356), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 97/378 (25%), Positives = 170/378 (44%), Gaps = 6/378 (1%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
+E F L+ + ++G A +V + M + G +P+ V+ L+ Y + GR ++A
Sbjct: 219 DETTFTTLMQGFVEEGSIKAALRVKARMLEMGCSPTKVTVNVLINGYCKLGRVEDALGYI 278
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
++ ++G P +TY + + A +V ++ E P D +++++
Sbjct: 279 QQEIANGFEPDQITYNTFVNGLCQNGHVGHALKVMDVMVQEGHDP---DVFTYNIVVNCL 335
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSKIYD---QMQRAGLQPDV 271
K G E+A+ + M ERG T+N+L+ + + + D Q+ GL PDV
Sbjct: 336 CKNGQLEEAKGILNQMVERGCLPDITTFNTLIVALCSGNRLEEALDLARQVTLKGLSPDV 395
Query: 272 VSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKC 331
++ +LINA K + AL +FEEM +G P YN L+D G + +A + K
Sbjct: 396 YTFNILINALCKVGDPQLALRLFEEMKSSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKE 455
Query: 332 MRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNN 391
M C +Y T++ +E AE+ F ++ G N IT+ TLI G K
Sbjct: 456 MESAGCPRSTVTYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKR 515
Query: 392 LEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNI 451
++ ++ +M G++PN + +I+ Y K D A + M + GF D
Sbjct: 516 IDDANQLISQMISEGLQPNNITYNSILTHYCKQGDIKKAADILQTMTANGFEVDVVTYGT 575
Query: 452 LLSLAKTADERNEANELL 469
L++ A A +LL
Sbjct: 576 LINGLCKAGRTQVALKLL 593
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 103/389 (26%), Positives = 166/389 (42%), Gaps = 36/389 (9%)
Query: 116 EKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKL 175
E V S M ++G P VV+ LM+A R + + A + M SSG P T+ +++
Sbjct: 170 ETVYSEMGERGIKPDVVTFNTLMKALCRAHQVRTAVLMLEEMSSSGVAPDETTFTTLMQG 229
Query: 176 FVEANKFKEAEEVFMTLLDEEKSPLK--------------------------------PD 203
FVE K A V +L+ SP K PD
Sbjct: 230 FVEEGSIKAALRVKARMLEMGCSPTKVTVNVLINGYCKLGRVEDALGYIQQEIANGFEPD 289
Query: 204 QKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFET---NYKEVSKIYD 260
Q ++ + + G A K+ +M + G TYN +++ +E I +
Sbjct: 290 QITYNTFVNGLCQNGHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILN 349
Query: 261 QMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISG 320
QM G PD+ ++ LI A R EEAL + ++ G+ P +NIL++A G
Sbjct: 350 QMVERGCLPDITTFNTLIVALCSGNRLEEALDLARQVTLKGLSPDVYTFNILINALCKVG 409
Query: 321 MVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYG 380
A +F+ M+ C+PD +Y T++ + + A + ++ G + +TY
Sbjct: 410 DPQLALRLFEEMKSSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKEMESAGCPRSTVTYN 469
Query: 381 TLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESC 440
T+I G K +E+ E++D+M + GI N F T++D K+K D A +M S
Sbjct: 470 TIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKRIDDANQLISQMISE 529
Query: 441 GFPPDQKAKN-ILLSLAKTADERNEANEL 468
G P+ N IL K D + A+ L
Sbjct: 530 GLQPNNITYNSILTHYCKQGDIKKAADIL 558
Score = 102 bits (253), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 93/355 (26%), Positives = 154/355 (43%), Gaps = 15/355 (4%)
Query: 37 QIEEVGSAVAVLRSERTRGQPLPKDLVLGTLVRLKQLKKWNVVSEVLEWLRIQSWWDFNE 96
Q+EE A +L RG LP TL+ L N + E L+ R + +
Sbjct: 340 QLEE---AKGILNQMVERGC-LPDITTFNTLI--VALCSGNRLEEALDLARQVTLKGLSP 393
Query: 97 --MDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
F +LI A K GD A ++ M G P V++ L++ G+ A +
Sbjct: 394 DVYTFNILINALCKVGDPQLALRLFEEMKSSGCTPDEVTYNTLIDNLCSLGKLGKALDLL 453
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
+ M+S+G S +TY I+ + + +EAEEVF + + + + F+ +I
Sbjct: 454 KEMESAGCPRSTVTYNTIIDGLCKKMRIEEAEEVFDQM---DLQGISRNAITFNTLIDGL 510
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSLMSF---ETNYKEVSKIYDQMQRAGLQPDV 271
K + A +L + M G+Q + +TYNS+++ + + K+ + I M G + DV
Sbjct: 511 CKDKRIDDANQLISQMISEGLQPNNITYNSILTHYCKQGDIKKAADILQTMTANGFEVDV 570
Query: 272 VSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKC 331
V+Y LIN KA R + AL + M G+R T KAYN ++ + A +F+
Sbjct: 571 VTYGTLINGLCKAGRTQVALKLLRGMRIKGMRATPKAYNPVIQSLFRRNNTRDAMNLFRE 630
Query: 332 MRRDRCSPDICSYTTMLSAYV-NASDMEGAEKFFRRLKQDGFVPNVITYGTLIKG 385
M PD +Y + + A F + GF+P ++ L +G
Sbjct: 631 MTEVGEPPDAFTYKIVFRGLCRGGGSIREAFDFLLEMVDKGFIPEFSSFRMLAEG 685
Score = 102 bits (253), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 83/395 (21%), Positives = 171/395 (43%), Gaps = 47/395 (11%)
Query: 102 LITAYGKQGDFNKAEKVL-SFMNKKGYAPSVVSHTALMEAYGRGGRYKN-AEAIFRRMQS 159
L+TA +Q D + A ++L + + ++ +AP + ++ G + + + M+
Sbjct: 47 LLTALREQPDPDAALRMLNAALAREDFAPGPEVYEEIIRKLGAAAGAADLMKVLVTEMRR 106
Query: 160 SGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPL---KPDQKMFHMMIYMYKK 216
G + L+ + F +A ++ + LD PL + D +++ ++ + +
Sbjct: 107 EGHQVRVGVVHSFLESYARQQLFVDAVDLVLNQLD----PLFGIQADTVVYNHLLNVLVE 162
Query: 217 AGGYEKARKLFALMAERGVQQSTVTYNSLM-----------------------------S 247
+ +++ M ERG++ VT+N+LM +
Sbjct: 163 GSKMKLLETVYSEMGERGIKPDVVTFNTLMKALCRAHQVRTAVLMLEEMSSSGVAPDETT 222
Query: 248 FET---------NYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEML 298
F T + K ++ +M G P V+ +LIN Y K R E+AL ++ +
Sbjct: 223 FTTLMQGFVEEGSIKAALRVKARMLEMGCSPTKVTVNVLINGYCKLGRVEDALGYIQQEI 282
Query: 299 DAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDME 358
G P YN ++ +G V A V M ++ PD+ +Y +++ +E
Sbjct: 283 ANGFEPDQITYNTFVNGLCQNGHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLE 342
Query: 359 GAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIM 418
A+ ++ + G +P++ T+ TLI N LE+ +++ ++ + G+ P+ F ++
Sbjct: 343 EAKGILNQMVERGCLPDITTFNTLIVALCSGNRLEEALDLARQVTLKGLSPDVYTFNILI 402
Query: 419 DAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILL 453
+A K D A+ ++EM+S G PD+ N L+
Sbjct: 403 NALCKVGDPQLALRLFEEMKSSGCTPDEVTYNTLI 437
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 61/238 (25%), Positives = 109/238 (45%), Gaps = 3/238 (1%)
Query: 234 GVQQSTVTYNSLMSF---ETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEA 290
G+Q TV YN L++ + K + +Y +M G++PDVV++ L+ A +A + A
Sbjct: 145 GIQADTVVYNHLLNVLVEGSKMKLLETVYSEMGERGIKPDVVTFNTLMKALCRAHQVRTA 204
Query: 291 LAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSA 350
+ + EEM +GV P + L+ F G + A V M CSP + +++
Sbjct: 205 VLMLEEMSSSGVAPDETTFTTLMQGFVEEGSIKAALRVKARMLEMGCSPTKVTVNVLING 264
Query: 351 YVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPN 410
Y +E A + ++ +GF P+ ITY T + G + ++ +++ D M G P+
Sbjct: 265 YCKLGRVEDALGYIQQEIANGFEPDQITYNTFVNGLCQNGHVGHALKVMDVMVQEGHDPD 324
Query: 411 QTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANEL 468
+ +++ KN + A +M G PD N L+ + + EA +L
Sbjct: 325 VFTYNIVVNCLCKNGQLEEAKGILNQMVERGCLPDITTFNTLIVALCSGNRLEEALDL 382
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 69/339 (20%), Positives = 143/339 (42%), Gaps = 41/339 (12%)
Query: 88 IQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRY 147
+Q D + + +++ K G +A+ +L+ M ++G P + + L+ A G R
Sbjct: 317 VQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVERGCLPDITTFNTLIVALCSGNRL 376
Query: 148 KNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMF 207
+ A + R++ G P T+ I++ + + A +F + + S PD+ +
Sbjct: 377 EEALDLARQVTLKGLSPDVYTFNILINALCKVGDPQLALRLFEEM---KSSGCTPDEVTY 433
Query: 208 HMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSL---MSFETNYKEVSKIYDQMQR 264
+ +I G KA L M G +STVTYN++ + + +E +++DQM
Sbjct: 434 NTLIDNLCSLGKLGKALDLLKEMESAGCPRSTVTYNTIIDGLCKKMRIEEAEEVFDQMDL 493
Query: 265 AGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQ 324
G+ + +++ LI+ K +R ++A + +M+ G++P + YN +L + G + +
Sbjct: 494 QGISRNAITFNTLIDGLCKDKRIDDANQLISQMISEGLQPNNITYNSILTHYCKQGDIKK 553
Query: 325 ARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKF--------------------- 363
A + + M + D+ +Y T+++ A + A K
Sbjct: 554 AADILQTMTANGFEVDVVTYGTLINGLCKAGRTQVALKLLRGMRIKGMRATPKAYNPVIQ 613
Query: 364 --------------FRRLKQDGFVPNVITYGTLIKGYAK 388
FR + + G P+ TY + +G +
Sbjct: 614 SLFRRNNTRDAMNLFREMTEVGEPPDAFTYKIVFRGLCR 652
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 64/297 (21%), Positives = 128/297 (43%), Gaps = 11/297 (3%)
Query: 34 LMNQIEEVGSAVAVLR--SERTRGQPLPKDLVLGTLV-RLKQLKKWNVVSEVLEWLRIQS 90
L+N + +VG LR E P ++ TL+ L L K ++L+ + +
Sbjct: 401 LINALCKVGDPQLALRLFEEMKSSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKEME-SA 459
Query: 91 WWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNA 150
+ + + +I K+ +AE+V M+ +G + + ++ L++ + R +A
Sbjct: 460 GCPRSTVTYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKRIDDA 519
Query: 151 EAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMM 210
+ +M S G +P+ +TY IL + + K+A ++ T+ + + D + +
Sbjct: 520 NQLISQMISEGLQPNNITYNSILTHYCKQGDIKKAADILQTM---TANGFEVDVVTYGTL 576
Query: 211 IYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSF---ETNYKEVSKIYDQMQRAGL 267
I KAG + A KL M +G++ + YN ++ N ++ ++ +M G
Sbjct: 577 INGLCKAGRTQVALKLLRGMRIKGMRATPKAYNPVIQSLFRRNNTRDAMNLFREMTEVGE 636
Query: 268 QPDVVSYALLINAYGKARRE-EEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVD 323
PD +Y ++ + EA EM+D G P ++ +L + GM D
Sbjct: 637 PPDAFTYKIVFRGLCRGGGSIREAFDFLLEMVDKGFIPEFSSFRMLAEGLLNLGMDD 693
>gi|7413543|emb|CAB86023.1| putative protein [Arabidopsis thaliana]
Length = 880
Score = 142 bits (358), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 96/374 (25%), Positives = 173/374 (46%), Gaps = 38/374 (10%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
LI Y K G +KA +V M ++G ++ +++ ++ + + + NA A+F M G
Sbjct: 490 LINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMVKEG 549
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
+P + Y I+ F A T+ + +K +P + F +I+ Y K+G
Sbjct: 550 MKPDVILYNNIISAFCGMGNMDRA---IQTVKEMQKLRHRPTTRTFMPIIHGYAKSGDMR 606
Query: 222 KARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSKIYDQM------------------- 262
++ ++F +M G + T+N L++ ++ +I D+M
Sbjct: 607 RSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQAVEILDEMTLAGVSANEHTYTKIMQGY 666
Query: 263 ----------------QRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTH 306
Q GL D+ +Y L+ A K+ R + ALAV +EM +
Sbjct: 667 ASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSALAVTKEMSARNIPRNS 726
Query: 307 KAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRR 366
YNIL+D +A G V +A + + M+++ PDI +YT+ +SA A DM A +
Sbjct: 727 FVYNILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTSFISACSKAGDMNRATQTIEE 786
Query: 367 LKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKD 426
++ G PN+ TY TLIKG+A+ + EK + Y++M+ GIKP++ ++ ++ +
Sbjct: 787 MEALGVKPNIKTYTTLIKGWARASLPEKALSCYEEMKAMGIKPDKAVYHCLLTSLLSRAS 846
Query: 427 FDSAVVWYKEMESC 440
A ++ M C
Sbjct: 847 IAEAYIYSGVMTIC 860
Score = 139 bits (349), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 95/383 (24%), Positives = 178/383 (46%), Gaps = 38/383 (9%)
Query: 98 DFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRM 157
+F +++ YG++GD ++A + M +G P+ +T+L+ AY G A + R+M
Sbjct: 311 EFGLMVKFYGRRGDMHRARETFERMRARGITPTSRIYTSLIHAYAVGRDMDEALSCVRKM 370
Query: 158 QSSGPRPSALTYQIILKLFVEANK-------FKEAEEVFMTL------------------ 192
+ G S +TY +I+ F +A F EA+ + TL
Sbjct: 371 KEEGIEMSLVTYSVIVGGFSKAGHAEAADYWFDEAKRIHKTLNASIYGKIIYAHCQTCNM 430
Query: 193 -------LDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSL 245
+ E+ + ++H M+ Y +K +F + E G + VTY L
Sbjct: 431 ERAEALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVFKRLKECGFTPTVVTYGCL 490
Query: 246 MSFETNYKEVSK---IYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGV 302
++ T ++SK + M+ G++ ++ +Y+++IN + K + A AVFE+M+ G+
Sbjct: 491 INLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMVKEGM 550
Query: 303 RPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEK 362
+P YN ++ AF G +D+A K M++ R P ++ ++ Y + DM + +
Sbjct: 551 KPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGDMRRSLE 610
Query: 363 FFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYG 422
F +++ G VP V T+ LI G + + +EI D+M + G+ N+ +T IM Y
Sbjct: 611 VFDMMRRCGCVPTVHTFNGLINGLVEKR---QAVEILDEMTLAGVSANEHTYTKIMQGYA 667
Query: 423 KNKDFDSAVVWYKEMESCGFPPD 445
D A ++ +++ G D
Sbjct: 668 SVGDTGKAFEYFTRLQNEGLDVD 690
Score = 88.6 bits (218), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 51/218 (23%), Positives = 101/218 (46%), Gaps = 4/218 (1%)
Query: 251 NYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYN 310
N++ V ++++ + P + L++ YG+ A FE M G+ PT + Y
Sbjct: 293 NWQAVISAFEKISK----PSRTEFGLMVKFYGRRGDMHRARETFERMRARGITPTSRIYT 348
Query: 311 ILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQD 370
L+ A+A+ +D+A + + M+ + + +Y+ ++ + A E A+ +F K+
Sbjct: 349 SLIHAYAVGRDMDEALSCVRKMKEEGIEMSLVTYSVIVGGFSKAGHAEAADYWFDEAKRI 408
Query: 371 GFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSA 430
N YG +I + + N+E+ + +M GI I+ T+MD Y D
Sbjct: 409 HKTLNASIYGKIIYAHCQTCNMERAEALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKG 468
Query: 431 VVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANEL 468
+V +K ++ CGF P L++L + ++A E+
Sbjct: 469 LVVFKRLKECGFTPTVVTYGCLINLYTKVGKISKALEV 506
>gi|302762673|ref|XP_002964758.1| hypothetical protein SELMODRAFT_82857 [Selaginella moellendorffii]
gi|300166991|gb|EFJ33596.1| hypothetical protein SELMODRAFT_82857 [Selaginella moellendorffii]
Length = 552
Score = 142 bits (358), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 84/363 (23%), Positives = 171/363 (47%), Gaps = 9/363 (2%)
Query: 97 MDFLMLITAYGKQGDFNKAEKVLS--FMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
+ F ++I K+G+ A +V+ FM + G +P V++ ++++ + R +A +F
Sbjct: 172 ITFGLIIKGLCKEGEIEAAFRVVDEMFMIESGLSPDVITFNSVLDGLCKEQRILDAHNVF 231
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
+R G RP+ +TY ++ + K EA ++ +++ + + + ++
Sbjct: 232 KRALERGCRPNVVTYSTLIDGLSKMAKMDEALQLLAKMVE---LGCRANTVTYSTVVDGL 288
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSLMSF---ETNYKEVSKIYDQMQRAGLQPDV 271
K G E A + M + G VTYN+L+ +E + +M AG P V
Sbjct: 289 LKVGRMEDAVVVLRQMRDAGCLPDAVTYNTLIDGFFKRQRLREAVGLLREMLEAGFHPSV 348
Query: 272 VSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKC 331
V+Y L + ++ R +EA+ + + M G P Y+ ++D +G V +A F+
Sbjct: 349 VTYTTLCHGLCRSGRFDEAVEILDYMAARGCAPNAITYSSIVDGLCKAGRVTEALGYFEK 408
Query: 332 MRRDRC-SPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVN 390
M RD +P + +Y+ ++ A ++ A +F R+ + G +P+V+T+ LI G
Sbjct: 409 MARDEVVAPHVIAYSALIDGLCKAGKIDEAYEFLERMIRAGRIPDVVTFSILINGLCDAG 468
Query: 391 NLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKN 450
++ +E++ M G P+ + T++D + D A +++M S G PD+ +
Sbjct: 469 RIDTGLELFRGMAERGCVPDMVTYATLVDRLCRASRVDEAFDLFQQMRSDGLSPDRSTRR 528
Query: 451 ILL 453
++
Sbjct: 529 TMI 531
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 92/370 (24%), Positives = 168/370 (45%), Gaps = 9/370 (2%)
Query: 126 GYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEA 185
G+ P+VV+++ L++ R + M G P+A+TY ++ + + KEA
Sbjct: 96 GFRPTVVTYSTLIDGLCRDHEVDKGCKLLEEMAGRGCAPNAVTYNTLVNALLGQGRSKEA 155
Query: 186 EEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLF--ALMAERGVQQSTVTYN 243
F L + P+ F ++I K G E A ++ M E G+ +T+N
Sbjct: 156 ---FSLLEQMAANGCPPELITFGLIIKGLCKEGEIEAAFRVVDEMFMIESGLSPDVITFN 212
Query: 244 SLMSFETNYKEVSKIYDQMQRA---GLQPDVVSYALLINAYGKARREEEALAVFEEMLDA 300
S++ + + ++ +RA G +P+VV+Y+ LI+ K + +EAL + +M++
Sbjct: 213 SVLDGLCKEQRILDAHNVFKRALERGCRPNVVTYSTLIDGLSKMAKMDEALQLLAKMVEL 272
Query: 301 GVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGA 360
G R Y+ ++D G ++ A V + MR C PD +Y T++ + + A
Sbjct: 273 GCRANTVTYSTVVDGLLKVGRMEDAVVVLRQMRDAGCLPDAVTYNTLIDGFFKRQRLREA 332
Query: 361 EKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDA 420
R + + GF P+V+TY TL G + ++ +EI D M G PN +++I+D
Sbjct: 333 VGLLREMLEAGFHPSVVTYTTLCHGLCRSGRFDEAVEILDYMAARGCAPNAITYSSIVDG 392
Query: 421 YGKNKDFDSAVVWYKEM-ESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEP 479
K A+ ++++M P A + L+ A + +EA E L P
Sbjct: 393 LCKAGRVTEALGYFEKMARDEVVAPHVIAYSALIDGLCKAGKIDEAYEFLERMIRAGRIP 452
Query: 480 GINGLSISVD 489
+ SI ++
Sbjct: 453 DVVTFSILIN 462
Score = 138 bits (348), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 104/419 (24%), Positives = 188/419 (44%), Gaps = 44/419 (10%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
LI + + +K K+L M +G AP+ V++ L+ A GR K A ++ +M ++G
Sbjct: 107 LIDGLCRDHEVDKGCKLLEEMAGRGCAPNAVTYNTLVNALLGQGRSKEAFSLLEQMAANG 166
Query: 162 PRPSALTYQIILKLFVEANK----FKEAEEVFM-------------TLLD---EEKSPL- 200
P +T+ +I+K + + F+ +E+FM ++LD +E+ L
Sbjct: 167 CPPELITFGLIIKGLCKEGEIEAAFRVVDEMFMIESGLSPDVITFNSVLDGLCKEQRILD 226
Query: 201 -------------KPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMS 247
+P+ + +I K ++A +L A M E G + +TVTY++++
Sbjct: 227 AHNVFKRALERGCRPNVVTYSTLIDGLSKMAKMDEALQLLAKMVELGCRANTVTYSTVVD 286
Query: 248 FETNYKEVSKIYD------QMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAG 301
+V ++ D QM+ AG PD V+Y LI+ + K +R EA+ + EML+AG
Sbjct: 287 ---GLLKVGRMEDAVVVLRQMRDAGCLPDAVTYNTLIDGFFKRQRLREAVGLLREMLEAG 343
Query: 302 VRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAE 361
P+ Y L SG D+A + M C+P+ +Y++++ A + A
Sbjct: 344 FHPSVVTYTTLCHGLCRSGRFDEAVEILDYMAARGCAPNAITYSSIVDGLCKAGRVTEAL 403
Query: 362 KFFRRLKQDGFV-PNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDA 420
+F ++ +D V P+VI Y LI G K +++ E ++M G P+ F+ +++
Sbjct: 404 GYFEKMARDEVVAPHVIAYSALIDGLCKAGKIDEAYEFLERMIRAGRIPDVVTFSILING 463
Query: 421 YGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEP 479
D+ + ++ M G PD L+ A +EA +L P
Sbjct: 464 LCDAGRIDTGLELFRGMAERGCVPDMVTYATLVDRLCRASRVDEAFDLFQQMRSDGLSP 522
Score = 138 bits (347), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 95/375 (25%), Positives = 170/375 (45%), Gaps = 11/375 (2%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
+I K +KA + M K P VV++ AL++ G+ R K A +F ++ G
Sbjct: 1 MIDGLCKSRKVDKAITLFKQMVDKAIYPDVVTYGALIDGLGKQRRVKEAYDLFEEARAKG 60
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKS--PLKPDQKMFHMMIYMYKKAGG 219
P+ +TY ++ + + + A +TL D+ +P + +I +
Sbjct: 61 CHPTVVTYNTMIDGLCKCGRIENA----LTLYDDMAIHFGFRPTVVTYSTLIDGLCRDHE 116
Query: 220 YEKARKLFALMAERGVQQSTVTYNSLMSF---ETNYKEVSKIYDQMQRAGLQPDVVSYAL 276
+K KL MA RG + VTYN+L++ + KE + +QM G P+++++ L
Sbjct: 117 VDKGCKLLEEMAGRGCAPNAVTYNTLVNALLGQGRSKEAFSLLEQMAANGCPPELITFGL 176
Query: 277 LINAYGKARREEEALAVFEE--MLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRR 334
+I K E A V +E M+++G+ P +N +LD + A VFK
Sbjct: 177 IIKGLCKEGEIEAAFRVVDEMFMIESGLSPDVITFNSVLDGLCKEQRILDAHNVFKRALE 236
Query: 335 DRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEK 394
C P++ +Y+T++ + M+ A + ++ + G N +TY T++ G KV +E
Sbjct: 237 RGCRPNVVTYSTLIDGLSKMAKMDEALQLLAKMVELGCRANTVTYSTVVDGLLKVGRMED 296
Query: 395 MMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLS 454
+ + +MR G P+ + T++D + K + AV +EM GF P L
Sbjct: 297 AVVVLRQMRDAGCLPDAVTYNTLIDGFFKRQRLREAVGLLREMLEAGFHPSVVTYTTLCH 356
Query: 455 LAKTADERNEANELL 469
+ +EA E+L
Sbjct: 357 GLCRSGRFDEAVEIL 371
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 77/311 (24%), Positives = 159/311 (51%), Gaps = 7/311 (2%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + + LI K ++A ++L+ M + G + V+++ +++ + GR ++A +
Sbjct: 242 NVVTYSTLIDGLSKMAKMDEALQLLAKMVELGCRANTVTYSTVVDGLLKVGRMEDAVVVL 301
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
R+M+ +G P A+TY ++ F + + +EA + +L+ + P + + +
Sbjct: 302 RQMRDAGCLPDAVTYNTLIDGFFKRQRLREAVGLLREMLE---AGFHPSVVTYTTLCHGL 358
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSKI---YDQMQR-AGLQPD 270
++G +++A ++ MA RG + +TY+S++ V++ +++M R + P
Sbjct: 359 CRSGRFDEAVEILDYMAARGCAPNAITYSSIVDGLCKAGRVTEALGYFEKMARDEVVAPH 418
Query: 271 VVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFK 330
V++Y+ LI+ KA + +EA E M+ AG P ++IL++ +G +D +F+
Sbjct: 419 VIAYSALIDGLCKAGKIDEAYEFLERMIRAGRIPDVVTFSILINGLCDAGRIDTGLELFR 478
Query: 331 CMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVN 390
M C PD+ +Y T++ AS ++ A F++++ DG P+ T T+I G +VN
Sbjct: 479 GMAERGCVPDMVTYATLVDRLCRASRVDEAFDLFQQMRSDGLSPDRSTRRTMIHGLLEVN 538
Query: 391 NLEKMMEIYDK 401
E I D+
Sbjct: 539 RDEDAKRIQDE 549
>gi|296081889|emb|CBI20894.3| unnamed protein product [Vitis vinifera]
Length = 608
Score = 142 bits (358), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 87/360 (24%), Positives = 172/360 (47%), Gaps = 5/360 (1%)
Query: 97 MDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRR 156
+ + L+ A Q F+ ++S + + G P + A++ A+ G + A F +
Sbjct: 108 VTYTTLLAALTIQKHFDSIHSIISQVEENGMEPDSIFFNAVINAFSESGNMQEAMKYFWK 167
Query: 157 MQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKK 216
M+ SG +P+ T+ ++K + A + +E++++ + +E ++P+ + +++++ +
Sbjct: 168 MKESGSKPTTSTFNTLIKGYGIAGEPEESQKLLELMSQDEN--VRPNLRTYNVLVRAWCN 225
Query: 217 AGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSK---IYDQMQRAGLQPDVVS 273
KA + M G+Q VTYN++ + E S+ I +MQ + +QP+ +
Sbjct: 226 KKNIMKAWNVVYKMVASGLQPDAVTYNTIATAYAQNGEASQAEGIILEMQNSNVQPNERT 285
Query: 274 YALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMR 333
++I Y K + +EAL M D G++P +N L+ F + D V M
Sbjct: 286 CCIIIGGYCKEGKIKEALQFVYRMKDLGLQPNLVVFNSLIKGFIDAVDRDGVNEVLTLME 345
Query: 334 RDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLE 393
PD+ +++T+++A+ A M+ + F + + P+ Y L KGY + E
Sbjct: 346 EFGVKPDVITFSTIMNAWSAAGFMDKCREIFDDMVKARIQPDAHVYSILAKGYVRAGEPE 405
Query: 394 KMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILL 453
K EI + M +G PN IFTTI++ + + A+ +++M CG P+ K L+
Sbjct: 406 KAEEILNAMIKSGFHPNVVIFTTIINGWCSAGRMEYAIKIFEKMCECGIAPNLKTFETLI 465
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 91/368 (24%), Positives = 171/368 (46%), Gaps = 12/368 (3%)
Query: 117 KVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLF 176
+ +S ++K +V S T LM GR + ++I + G +PS +TY +L
Sbjct: 59 RCISCLSKTS-CRTVRSRTKLMNIMIEKGRPQEVQSILDSIIEGGHKPSLVTYTTLLAAL 117
Query: 177 VEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQ 236
F + + E++ ++PD F+ +I + ++G ++A K F M E G +
Sbjct: 118 TIQKHFDSIHSIISQV---EENGMEPDSIFFNAVINAFSESGNMQEAMKYFWKMKESGSK 174
Query: 237 QSTVTYNSLM---SFETNYKEVSKIYDQM-QRAGLQPDVVSYALLINAYGKARREEEALA 292
+T T+N+L+ +E K+ + M Q ++P++ +Y +L+ A+ + +A
Sbjct: 175 PTTSTFNTLIKGYGIAGEPEESQKLLELMSQDENVRPNLRTYNVLVRAWCNKKNIMKAWN 234
Query: 293 VFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYV 352
V +M+ +G++P YN + A+A +G QA + M+ P+ + ++ Y
Sbjct: 235 VVYKMVASGLQPDAVTYNTIATAYAQNGEASQAEGIILEMQNSNVQPNERTCCIIIGGYC 294
Query: 353 NASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQT 412
++ A +F R+K G PN++ + +LIKG+ + + + E+ M G+KP+
Sbjct: 295 KEGKIKEALQFVYRMKDLGLQPNLVVFNSLIKGFIDAVDRDGVNEVLTLMEEFGVKPDVI 354
Query: 413 IFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNF 472
F+TIM+A+ D + +M PD +IL A E +A E+L
Sbjct: 355 TFSTIMNAWSAAGFMDKCREIFDDMVKARIQPDAHVYSILAKGYVRAGEPEKAEEILNAM 414
Query: 473 N----HPN 476
HPN
Sbjct: 415 IKSGFHPN 422
Score = 102 bits (255), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 74/324 (22%), Positives = 142/324 (43%), Gaps = 41/324 (12%)
Query: 101 MLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSS 160
+L+ A+ + + KA V+ M G P V++ + AY + G AE I MQ+S
Sbjct: 218 VLVRAWCNKKNIMKAWNVVYKMVASGLQPDAVTYNTIATAYAQNGEASQAEGIILEMQNS 277
Query: 161 GPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGY 220
+P+ T II+ + + K KEA + + D L+P+ +F+ +I + A
Sbjct: 278 NVQPNERTCCIIIGGYCKEGKIKEALQFVYRMKD---LGLQPNLVVFNSLIKGFIDAVDR 334
Query: 221 EKARKLFALMAERGVQQSTVTYNSLM---SFETNYKEVSKIYDQMQRAGLQPDVVSYALL 277
+ ++ LM E GV+ +T++++M S + +I+D M +A +QPD Y++L
Sbjct: 335 DGVNEVLTLMEEFGVKPDVITFSTIMNAWSAAGFMDKCREIFDDMVKARIQPDAHVYSIL 394
Query: 278 INAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRC 337
Y +A E+A + M+ +G P + +++ + +G ++ A +F+
Sbjct: 395 AKGYVRAGEPEKAEEILNAMIKSGFHPNVVIFTTIINGWCSAGRMEYAIKIFE------- 447
Query: 338 SPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMME 397
++ + G PN+ T+ TLI GY + K E
Sbjct: 448 ----------------------------KMCECGIAPNLKTFETLIWGYGEARQPWKSEE 479
Query: 398 IYDKMRVNGIKPNQTIFTTIMDAY 421
+ M ++P +T + +A+
Sbjct: 480 VLQIMEEFNVQPEKTTLLLVAEAW 503
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 76/324 (23%), Positives = 146/324 (45%), Gaps = 16/324 (4%)
Query: 73 LKKWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVV 132
+K WNVV ++ + S + + + + TAY + G+ ++AE ++ M P+
Sbjct: 230 MKAWNVVYKM-----VASGLQPDAVTYNTIATAYAQNGEASQAEGIILEMQNSNVQPNER 284
Query: 133 SHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTL 192
+ ++ Y + G+ K A RM+ G +P+ + + ++K F++A EV +TL
Sbjct: 285 TCCIIIGGYCKEGKIKEALQFVYRMKDLGLQPNLVVFNSLIKGFIDAVDRDGVNEV-LTL 343
Query: 193 LDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNY 252
++E +KPD F ++ + AG +K R++F M + +Q Y+ L
Sbjct: 344 MEE--FGVKPDVITFSTIMNAWSAAGFMDKCREIFDDMVKARIQPDAHVYSILAKGYVRA 401
Query: 253 KEVSK---IYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAY 309
E K I + M ++G P+VV + +IN + A R E A+ +FE+M + G+ P K +
Sbjct: 402 GEPEKAEEILNAMIKSGFHPNVVIFTTIINGWCSAGRMEYAIKIFEKMCECGIAPNLKTF 461
Query: 310 NILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQ 369
L+ + + ++ V + M P+ + + A+ + A + +K
Sbjct: 462 ETLIWGYGEARQPWKSEEVLQIMEEFNVQPEKTTLLLVAEAWRATGLKKEANRILSAVKN 521
Query: 370 DGFVPNV-----ITYGTLIKGYAK 388
+ I G+L K Y K
Sbjct: 522 EEMTHETDREDKIPVGSLEKHYQK 545
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 47/210 (22%), Positives = 97/210 (46%), Gaps = 1/210 (0%)
Query: 271 VVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFK 330
V S L+N + R +E ++ + +++ G +P+ Y LL A I D ++
Sbjct: 72 VRSRTKLMNIMIEKGRPQEVQSILDSIIEGGHKPSLVTYTTLLAALTIQKHFDSIHSIIS 131
Query: 331 CMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVN 390
+ + PD + +++A+ + +M+ A K+F ++K+ G P T+ TLIKGY
Sbjct: 132 QVEENGMEPDSIFFNAVINAFSESGNMQEAMKYFWKMKESGSKPTTSTFNTLIKGYGIAG 191
Query: 391 NLEKMMEIYDKMRVN-GIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAK 449
E+ ++ + M + ++PN + ++ A+ K+ A +M + G PD
Sbjct: 192 EPEESQKLLELMSQDENVRPNLRTYNVLVRAWCNKKNIMKAWNVVYKMVASGLQPDAVTY 251
Query: 450 NILLSLAKTADERNEANELLGNFNHPNNEP 479
N + + E ++A ++ + N +P
Sbjct: 252 NTIATAYAQNGEASQAEGIILEMQNSNVQP 281
>gi|359481393|ref|XP_002276762.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g32630-like [Vitis vinifera]
Length = 625
Score = 142 bits (358), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 92/369 (24%), Positives = 172/369 (46%), Gaps = 6/369 (1%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + + I Y K+ D ++L+ M K+G A +VV++T L+ + G+ + A+ +F
Sbjct: 259 NVVTYNAFIEGYFKRLDLGGVAEILTLMEKEGVACNVVTYTLLIHGFSNIGKIEEAQRLF 318
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
M+ G Y I+ + K A +F + D+ L P + +I+
Sbjct: 319 EEMREKGIEADVYVYTSIISCNCRSGNVKRALVLFDEMTDK---GLIPSAHTYGALIHGV 375
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETN---YKEVSKIYDQMQRAGLQPDV 271
KAG E A+ L M +G+ + V +N+L+ E ++ M++ GL+ DV
Sbjct: 376 CKAGQMEAAQMLVNEMQGKGIDLNPVIFNTLIDGYCESGMVDEALRLQVVMEKKGLESDV 435
Query: 272 VSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKC 331
+Y + + K R++EA + M++ GV P ++ L+D + G +A+ VF+
Sbjct: 436 FAYNSIASGLCKLNRKDEAKGLLFSMVERGVSPNTMSFTTLIDIYCKEGNFVEAKRVFRE 495
Query: 332 MRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNN 391
M P+I +Y ++ Y +M+ A K L+ G +P+V T +LI G
Sbjct: 496 MEEKGNVPNIITYNVLIDGYSKRGNMKEAHKLKDELENRGLIPDVYTCTSLIHGECIDGK 555
Query: 392 LEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNI 451
++ ++++D+M G+ PN +T ++ K+ + A Y EM+ G PD +
Sbjct: 556 VDMALKLFDEMPQRGLVPNVVTYTAMISGLSKDGRSEEAFKLYDEMKETGLTPDDTVYSS 615
Query: 452 LLSLAKTAD 460
L+ +A+
Sbjct: 616 LVGSLHSAE 624
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 105/444 (23%), Positives = 184/444 (41%), Gaps = 77/444 (17%)
Query: 94 FNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAI 153
F E F +L Y F +A + M KKG+ S + A RGG+ +
Sbjct: 153 FKEKFFDLLFRVYADNKMFGEALEAFEHMEKKGFHIDERSCLVYLLALRRGGQVDSCLRF 212
Query: 154 FRRM-----------------------------------QSSGPRPSALTYQIILKLFVE 178
FRRM + G + + +TY ++ + +
Sbjct: 213 FRRMVNLDVEVTVYSLTIVLDGLCKRGDVEMGRKLMDEVAAKGVKANVVTYNAFIEGYFK 272
Query: 179 ANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQS 238
E+ +TL+ EK + + + ++I+ + G E+A++LF M E+G++
Sbjct: 273 RLDLGGVAEI-LTLM--EKEGVACNVVTYTLLIHGFSNIGKIEEAQRLFEEMREKGIEAD 329
Query: 239 TVTYNSLMSFET---NYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFE 295
Y S++S N K ++D+M GL P +Y LI+ KA + E A +
Sbjct: 330 VYVYTSIISCNCRSGNVKRALVLFDEMTDKGLIPSAHTYGALIHGVCKAGQMEAAQMLVN 389
Query: 296 EMLDAGVRPTHKAYNILLDAFAISGMVDQA-----------------------RTVFKCM 332
EM G+ +N L+D + SGMVD+A + K
Sbjct: 390 EMQGKGIDLNPVIFNTLIDGYCESGMVDEALRLQVVMEKKGLESDVFAYNSIASGLCKLN 449
Query: 333 RRDRC------------SPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYG 380
R+D SP+ S+TT++ Y + A++ FR +++ G VPN+ITY
Sbjct: 450 RKDEAKGLLFSMVERGVSPNTMSFTTLIDIYCKEGNFVEAKRVFREMEEKGNVPNIITYN 509
Query: 381 TLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESC 440
LI GY+K N+++ ++ D++ G+ P+ T+++ + D A+ + EM
Sbjct: 510 VLIDGYSKRGNMKEAHKLKDELENRGLIPDVYTCTSLIHGECIDGKVDMALKLFDEMPQR 569
Query: 441 GFPPDQKAKNILLSLAKTADERNE 464
G P+ ++S + D R+E
Sbjct: 570 GLVPNVVTYTAMIS-GLSKDGRSE 592
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 73/324 (22%), Positives = 140/324 (43%), Gaps = 6/324 (1%)
Query: 169 YQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFA 228
+ ++ +++ + F EA E F + EK D++ + + ++ G + + F
Sbjct: 158 FDLLFRVYADNKMFGEALEAFEHM---EKKGFHIDERSCLVYLLALRRGGQVDSCLRFFR 214
Query: 229 LMAERGVQQSTVTYNSLMSFETNYKEVS---KIYDQMQRAGLQPDVVSYALLINAYGKAR 285
M V+ + + ++ +V K+ D++ G++ +VV+Y I Y K
Sbjct: 215 RMVNLDVEVTVYSLTIVLDGLCKRGDVEMGRKLMDEVAAKGVKANVVTYNAFIEGYFKRL 274
Query: 286 REEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYT 345
+ M GV Y +L+ F+ G +++A+ +F+ MR D+ YT
Sbjct: 275 DLGGVAEILTLMEKEGVACNVVTYTLLIHGFSNIGKIEEAQRLFEEMREKGIEADVYVYT 334
Query: 346 TMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVN 405
+++S + +++ A F + G +P+ TYG LI G K +E + ++M+
Sbjct: 335 SIISCNCRSGNVKRALVLFDEMTDKGLIPSAHTYGALIHGVCKAGQMEAAQMLVNEMQGK 394
Query: 406 GIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEA 465
GI N IF T++D Y ++ D A+ ME G D A N + S + ++EA
Sbjct: 395 GIDLNPVIFNTLIDGYCESGMVDEALRLQVVMEKKGLESDVFAYNSIASGLCKLNRKDEA 454
Query: 466 NELLGNFNHPNNEPGINGLSISVD 489
LL + P + +D
Sbjct: 455 KGLLFSMVERGVSPNTMSFTTLID 478
>gi|225434273|ref|XP_002276453.1| PREDICTED: pentatricopeptide repeat-containing protein At5g65560
[Vitis vinifera]
gi|296084392|emb|CBI24780.3| unnamed protein product [Vitis vinifera]
Length = 890
Score = 142 bits (357), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 106/440 (24%), Positives = 193/440 (43%), Gaps = 18/440 (4%)
Query: 70 LKQLKKWNVVSEV----LEWLRIQ---SWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFM 122
L L K+ ++ E+ LE L Q + + FN M + Y K G+ +AE S +
Sbjct: 166 LMSLSKFLLIDEMKTVYLELLNNQISPNIYTFNAM-----VNGYCKIGNVVEAELYASKI 220
Query: 123 NKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKF 182
+ G P ++T+L+ + R NA +F M G + + ++Y ++ EA +
Sbjct: 221 VQAGLHPDTFTYTSLILGHCRNKGVDNAYEVFLIMPQKGCQRNEVSYTNLIHGLCEAGRI 280
Query: 183 KEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTY 242
EA ++F + ++ P + + ++IY +G +A LF M E+G + + TY
Sbjct: 281 NEALKLFADMTEDNCCP---TVRTYTVLIYALSGSGRKVEALNLFNEMKEKGCEPNVHTY 337
Query: 243 NSL---MSFETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLD 299
L + E E K+ +M GL P VV+Y LI+ Y K ++A + + M
Sbjct: 338 TVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYNALIDGYCKEGMIDDAFEILDLMES 397
Query: 300 AGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEG 359
P + YN L+ V +A + M + SP + +Y +++ +D+E
Sbjct: 398 NSCGPNTRTYNELICGLCKKRKVHKAMALLNKMLERKLSPSLITYNSLIHGQCKVNDLES 457
Query: 360 AEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMD 419
A + + ++G VP+ TY I K +E+ ++D ++ G+K N+ I+T ++D
Sbjct: 458 AYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFDSVKAKGVKANEVIYTALID 517
Query: 420 AYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEP 479
Y K D A + M + P+ N+L+ + EA+ L+ +P
Sbjct: 518 GYCKVGKIDVAYSLLERMLNDACLPNSYTYNVLIEGLCKEKKMKEASSLVAKMLTMGVKP 577
Query: 480 GINGLSISVDEEDDDDDDDE 499
+ +I + E D D
Sbjct: 578 TVVTYTILIGEMLKDGAFDH 597
Score = 141 bits (355), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 97/398 (24%), Positives = 176/398 (44%), Gaps = 6/398 (1%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
NE+ + LI + G N+A K+ + M + P+V ++T L+ A GR A +F
Sbjct: 263 NEVSYTNLIHGLCEAGRINEALKLFADMTEDNCCPTVRTYTVLIYALSGSGRKVEALNLF 322
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
M+ G P+ TY +++ + NK EA ++ L + + L P ++ +I Y
Sbjct: 323 NEMKEKGCEPNVHTYTVLIDGLCKENKMDEARKM---LSEMSEKGLIPSVVTYNALIDGY 379
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSK---IYDQMQRAGLQPDV 271
K G + A ++ LM +T TYN L+ ++V K + ++M L P +
Sbjct: 380 CKEGMIDDAFEILDLMESNSCGPNTRTYNELICGLCKKRKVHKAMALLNKMLERKLSPSL 439
Query: 272 VSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKC 331
++Y LI+ K E A + M + G+ P Y++ +D G V++A T+F
Sbjct: 440 ITYNSLIHGQCKVNDLESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFDS 499
Query: 332 MRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNN 391
++ + YT ++ Y ++ A R+ D +PN TY LI+G K
Sbjct: 500 VKAKGVKANEVIYTALIDGYCKVGKIDVAYSLLERMLNDACLPNSYTYNVLIEGLCKEKK 559
Query: 392 LEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNI 451
+++ + KM G+KP +T ++ K+ FD A+ + M S G+ PD
Sbjct: 560 MKEASSLVAKMLTMGVKPTVVTYTILIGEMLKDGAFDHALKVFNHMVSLGYQPDVCTYTA 619
Query: 452 LLSLAKTADERNEANELLGNFNHPNNEPGINGLSISVD 489
L + E ++++ N P + ++ +D
Sbjct: 620 FLHAYFSQGMLEEVDDVIAKMNEEGILPDLVTYTVLID 657
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 94/380 (24%), Positives = 175/380 (46%), Gaps = 16/380 (4%)
Query: 87 RIQSWWDFNEM----------DFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTA 136
++++ FNEM + +LI K+ ++A K+LS M++KG PSVV++ A
Sbjct: 315 KVEALNLFNEMKEKGCEPNVHTYTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYNA 374
Query: 137 LMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEE 196
L++ Y + G +A I M+S+ P+ TY ++ + K +A + +L+ +
Sbjct: 375 LIDGYCKEGMIDDAFEILDLMESNSCGPNTRTYNELICGLCKKRKVHKAMALLNKMLERK 434
Query: 197 KSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSL---MSFETNYK 253
L P ++ +I+ K E A +L +LM E G+ TY+ + E +
Sbjct: 435 ---LSPSLITYNSLIHGQCKVNDLESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVE 491
Query: 254 EVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILL 313
E ++D ++ G++ + V Y LI+ Y K + + A ++ E ML+ P YN+L+
Sbjct: 492 EAGTLFDSVKAKGVKANEVIYTALIDGYCKVGKIDVAYSLLERMLNDACLPNSYTYNVLI 551
Query: 314 DAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFV 373
+ + +A ++ M P + +YT ++ + + A K F + G+
Sbjct: 552 EGLCKEKKMKEASSLVAKMLTMGVKPTVVTYTILIGEMLKDGAFDHALKVFNHMVSLGYQ 611
Query: 374 PNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVW 433
P+V TY + Y LE++ ++ KM GI P+ +T ++D Y + A +
Sbjct: 612 PDVCTYTAFLHAYFSQGMLEEVDDVIAKMNEEGILPDLVTYTVLIDGYARLGLTHRAFDF 671
Query: 434 YKEMESCGFPPDQKAKNILL 453
K M G P +IL+
Sbjct: 672 LKCMVDTGCKPSLYIVSILI 691
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 95/415 (22%), Positives = 181/415 (43%), Gaps = 29/415 (6%)
Query: 61 DLVLGTLVRLKQLKKWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLS 120
+L+ G + K K +++++LE S +N LI K D A ++LS
Sbjct: 409 ELICGLCKKRKVHKAMALLNKMLERKLSPSLITYNS-----LIHGQCKVNDLESAYRLLS 463
Query: 121 FMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEAN 180
MN+ G P +++ ++ + GR + A +F +++ G + + + Y ++ + +
Sbjct: 464 LMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFDSVKAKGVKANEVIYTALIDGYCKVG 523
Query: 181 KFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTV 240
K A + +L++ P+ ++++I K ++A L A M GV+ + V
Sbjct: 524 KIDVAYSLLERMLND---ACLPNSYTYNVLIEGLCKEKKMKEASSLVAKMLTMGVKPTVV 580
Query: 241 TYNSL---MSFETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEM 297
TY L M + + K+++ M G QPDV +Y ++AY EE V +M
Sbjct: 581 TYTILIGEMLKDGAFDHALKVFNHMVSLGYQPDVCTYTAFLHAYFSQGMLEEVDDVIAKM 640
Query: 298 LDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLS-------- 349
+ G+ P Y +L+D +A G+ +A KCM C P + + ++
Sbjct: 641 NEEGILPDLVTYTVLIDGYARLGLTHRAFDFLKCMVDTGCKPSLYIVSILIKNLSHENRM 700
Query: 350 ----------AYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIY 399
+ N + E A K F ++ + G +V YG LI G+ + LE+ +
Sbjct: 701 KETRSEIGIDSVSNTLEYEIALKLFEKMVEHGCTIDVSIYGALIAGFCQQERLEEAQGLV 760
Query: 400 DKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLS 454
M+ G+ P++ I+ +++D K + AV M G P ++ +L+
Sbjct: 761 HHMKERGMSPSEDIYNSLLDCCCKLGVYAEAVRLVDAMVENGLLPLLESYKLLVC 815
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 88/327 (26%), Positives = 146/327 (44%), Gaps = 9/327 (2%)
Query: 153 IFRRMQSSGP---RPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHM 209
+FR+M + G +P+ Y IL + E + V++ LL+ + SP + F+
Sbjct: 143 VFRKMNADGEFKFKPTLRCYNTILMSLSKFLLIDEMKTVYLELLNNQISP---NIYTFNA 199
Query: 210 MIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSKIYDQ---MQRAG 266
M+ Y K G +A + + + G+ T TY SL+ K V Y+ M + G
Sbjct: 200 MVNGYCKIGNVVEAELYASKIVQAGLHPDTFTYTSLILGHCRNKGVDNAYEVFLIMPQKG 259
Query: 267 LQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQAR 326
Q + VSY LI+ +A R EAL +F +M + PT + Y +L+ A + SG +A
Sbjct: 260 CQRNEVSYTNLIHGLCEAGRINEALKLFADMTEDNCCPTVRTYTVLIYALSGSGRKVEAL 319
Query: 327 TVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGY 386
+F M+ C P++ +YT ++ + M+ A K + + G +P+V+TY LI GY
Sbjct: 320 NLFNEMKEKGCEPNVHTYTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYNALIDGY 379
Query: 387 AKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQ 446
K ++ EI D M N PN + ++ K + A+ +M P
Sbjct: 380 CKEGMIDDAFEILDLMESNSCGPNTRTYNELICGLCKKRKVHKAMALLNKMLERKLSPSL 439
Query: 447 KAKNILLSLAKTADERNEANELLGNFN 473
N L+ ++ A LL N
Sbjct: 440 ITYNSLIHGQCKVNDLESAYRLLSLMN 466
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 82/348 (23%), Positives = 149/348 (42%), Gaps = 26/348 (7%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + +LI K+ +A +++ M G P+VV++T L+ + G + +A +F
Sbjct: 543 NSYTYNVLIEGLCKEKKMKEASSLVAKMLTMGVKPTVVTYTILIGEMLKDGAFDHALKVF 602
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
M S G +P TY L + +E ++V + +E + PD + ++I Y
Sbjct: 603 NHMVSLGYQPDVCTYTAFLHAYFSQGMLEEVDDVIAKMNEE---GILPDLVTYTVLIDGY 659
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSL---MSFETNYKEVS--------------- 256
+ G +A M + G + S + L +S E KE
Sbjct: 660 ARLGLTHRAFDFLKCMVDTGCKPSLYIVSILIKNLSHENRMKETRSEIGIDSVSNTLEYE 719
Query: 257 ---KIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILL 313
K++++M G DV Y LI + + R EEA + M + G+ P+ YN LL
Sbjct: 720 IALKLFEKMVEHGCTIDVSIYGALIAGFCQQERLEEAQGLVHHMKERGMSPSEDIYNSLL 779
Query: 314 DAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSA-YVNASDMEGAEKFFRRLKQDGF 372
D G+ +A + M + P + SY ++ Y+ S+ E A+ F L G+
Sbjct: 780 DCCCKLGVYAEAVRLVDAMVENGLLPLLESYKLLVCGLYIEGSN-EKAKAVFHGLLSCGY 838
Query: 373 VPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDA 420
+ + + LI G K + +++ E+ D M G +PN ++ +++
Sbjct: 839 NYDEVAWKVLIDGLLKRDLVDECSELIDIMEEKGCQPNPLTYSLLIEG 886
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 57/281 (20%), Positives = 124/281 (44%), Gaps = 24/281 (8%)
Query: 243 NSLMSFETNYKEVSKIYDQMQ-RAGLQPDVVSYALLINAYGKARREEEA----------- 290
+SL +F + + ++ + R G + +V SY+ ++N +AR A
Sbjct: 72 SSLFAFNLDPQTALSFFNWIALRPGFKHNVHSYSSMLNILIRARLLGVAEKIRISMIKSC 131
Query: 291 ---------LAVFEEMLDAG---VRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCS 338
L VF +M G +PT + YN +L + + ++D+ +TV+ + ++ S
Sbjct: 132 CSIEDVLFVLEVFRKMNADGEFKFKPTLRCYNTILMSLSKFLLIDEMKTVYLELLNNQIS 191
Query: 339 PDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEI 398
P+I ++ M++ Y ++ AE + ++ Q G P+ TY +LI G+ + ++ E+
Sbjct: 192 PNIYTFNAMVNGYCKIGNVVEAELYASKIVQAGLHPDTFTYTSLILGHCRNKGVDNAYEV 251
Query: 399 YDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKT 458
+ M G + N+ +T ++ + + A+ + +M P + +L+
Sbjct: 252 FLIMPQKGCQRNEVSYTNLIHGLCEAGRINEALKLFADMTEDNCCPTVRTYTVLIYALSG 311
Query: 459 ADERNEANELLGNFNHPNNEPGINGLSISVDEEDDDDDDDE 499
+ + EA L EP ++ ++ +D ++ DE
Sbjct: 312 SGRKVEALNLFNEMKEKGCEPNVHTYTVLIDGLCKENKMDE 352
>gi|147767583|emb|CAN60200.1| hypothetical protein VITISV_039678 [Vitis vinifera]
Length = 525
Score = 142 bits (357), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 97/412 (23%), Positives = 190/412 (46%), Gaps = 21/412 (5%)
Query: 50 SERTRGQPLPKDLVLGTLVRLKQLKKWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQ 109
S + G L LV TL+RL+ + K + W + Q+ + + + ++I K
Sbjct: 73 SLQLNGIALSTHLVHQTLLRLRNVSK--IALSFFLWAKDQAHHSHDVVSYNLIIDILAKV 130
Query: 110 GDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPS-ALT 168
F+ A + + M++ P+ + L+ G + A F M + + +
Sbjct: 131 RQFDVAWQFIIEMDQNSLEPTSTTFRILIRRSVSAGLTRQAVRAFDDMSCFVEKDADSDD 190
Query: 169 YQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFA 228
+ +L + K A ++F ++ K + + KM+ ++IY + K A +L
Sbjct: 191 FCYLLDTLSKYGYVKLASQIF----NQRKFKFEANAKMYTILIYGWCKINRVSIAERLLG 246
Query: 229 LMAERGVQQSTVTYNSLMS-------------FETNYKEVSKIYDQMQRAGLQPDVVSYA 275
M ERG+ + VTYN L++ FE ++ K+ D+M++ G++PDV SY+
Sbjct: 247 EMVERGJXANVVTYNVLLNGICRXASLHPDDRFERTIRDAEKVLDEMRQXGIEPDVTSYS 306
Query: 276 LLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRD 335
++I+ Y +A + E L M D G+ PT Y ++ G ++ A + M +D
Sbjct: 307 IVIHVYSRAHKPELTLDKLRMMKDKGIWPTVATYTSVVKCLCSCGRLEDAEELVSDMVKD 366
Query: 336 RCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQD-GFVPNVITYGTLIKGYAKVNNLEK 394
SP +Y Y D + A + +R++K++ +P++ TY L+ + K+N +E
Sbjct: 367 GVSPSAATYNCFFKEYRGRKDSDNALRLYRKMKEEYSCLPDMHTYNILVGMFVKLNRMEI 426
Query: 395 MMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQ 446
+ EI+D M+ +G P+ +T ++ + + + A ++ EM G+ P +
Sbjct: 427 VQEIWDDMKTSGAGPDLDSYTLLIHGLCEKQKWKEACHFFVEMIEKGYLPQK 478
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/321 (20%), Positives = 133/321 (41%), Gaps = 12/321 (3%)
Query: 98 DFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRM 157
DF L+ K G A ++ + K + + +T L+ + + R AE + M
Sbjct: 190 DFCYLLDTLSKYGYVKLASQIFN-QRKFKFEANAKMYTILIYGWCKINRVSIAERLLGEM 248
Query: 158 QSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEK-------SPLKPDQKMFHMM 210
G + +TY ++L + T+ D EK ++PD + ++
Sbjct: 249 VERGJXANVVTYNVLLNGICRXASLHPDDRFERTIRDAEKVLDEMRQXGIEPDVTSYSIV 308
Query: 211 IYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETN---YKEVSKIYDQMQRAGL 267
I++Y +A E +M ++G+ + TY S++ + ++ ++ M + G+
Sbjct: 309 IHVYSRAHKPELTLDKLRMMKDKGIWPTVATYTSVVKCLCSCGRLEDAEELVSDMVKDGV 368
Query: 268 QPDVVSYALLINAYGKARREEEALAVFEEMLDA-GVRPTHKAYNILLDAFAISGMVDQAR 326
P +Y Y + + AL ++ +M + P YNIL+ F ++ +
Sbjct: 369 SPSAATYNCFFKEYRGRKDSDNALRLYRKMKEEYSCLPDMHTYNILVGMFVKLNRMEIVQ 428
Query: 327 TVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGY 386
++ M+ PD+ SYT ++ + A FF + + G++P IT+ TL +G
Sbjct: 429 EIWDDMKTSGAGPDLDSYTLLIHGLCEKQKWKEACHFFVEMIEKGYLPQKITFETLYRGL 488
Query: 387 AKVNNLEKMMEIYDKMRVNGI 407
+ + L+ + K+ I
Sbjct: 489 IQSDMLKTWRRLKKKLEEESI 509
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/247 (21%), Positives = 97/247 (39%), Gaps = 45/247 (18%)
Query: 270 DVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVF 329
DVVSY L+I+ K R+ + A EM + PT + IL+ +G+ QA F
Sbjct: 116 DVVSYNLIIDILAKVRQFDVAWQFIIEMDQNSLEPTSTTFRILIRRSVSAGLTRQAVRAF 175
Query: 330 ---KC-MRRDRCSPDIC-------------------------------SYTTMLSAYVNA 354
C + +D S D C YT ++ +
Sbjct: 176 DDMSCFVEKDADSDDFCYLLDTLSKYGYVKLASQIFNQRKFKFEANAKMYTILIYGWCKI 235
Query: 355 SDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNL------EKMM----EIYDKMRV 404
+ + AE+ + + G NV+TY L+ G + +L E+ + ++ D+MR
Sbjct: 236 NRVSIAERLLGEMVERGJXANVVTYNVLLNGICRXASLHPDDRFERTIRDAEKVLDEMRQ 295
Query: 405 NGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNE 464
GI+P+ T ++ ++ Y + + + + M+ G P ++ + +
Sbjct: 296 XGIEPDVTSYSIVIHVYSRAHKPELTLDKLRMMKDKGIWPTVATYTSVVKCLCSCGRLED 355
Query: 465 ANELLGN 471
A EL+ +
Sbjct: 356 AEELVSD 362
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 56/294 (19%), Positives = 114/294 (38%), Gaps = 37/294 (12%)
Query: 166 ALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARK 225
++Y +I+ + + +F A + +++ +++ L+P F ++I AG +A +
Sbjct: 117 VVSYNLIIDILAKVRQFDVAWQF---IIEMDQNSLEPTSTTFRILIRRSVSAGLTRQAVR 173
Query: 226 LF---ALMAERGVQQSTVTYNSLMSFETNY---KEVSKIYDQMQRAGLQPDVVSYALLIN 279
F + E+ Y L+ + Y K S+I++Q ++ + + Y +LI
Sbjct: 174 AFDDMSCFVEKDADSDDFCY--LLDTLSKYGYVKLASQIFNQ-RKFKFEANAKMYTILIY 230
Query: 280 AYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSP 339
+ K R A + EM++ G+ YN+LL+
Sbjct: 231 GWCKINRVSIAERLLGEMVERGJXANVVTYNVLLNG------------------------ 266
Query: 340 DICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIY 399
IC ++ + AEK ++Q G P+V +Y +I Y++ + E ++
Sbjct: 267 -ICRXASLHPDDRFERTIRDAEKVLDEMRQXGIEPDVTSYSIVIHVYSRAHKPELTLDKL 325
Query: 400 DKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILL 453
M+ GI P +T+++ + A +M G P N
Sbjct: 326 RMMKDKGIWPTVATYTSVVKCLCSCGRLEDAEELVSDMVKDGVSPSAATYNCFF 379
>gi|449477018|ref|XP_004154904.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g19290-like [Cucumis sativus]
Length = 567
Score = 142 bits (357), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 100/389 (25%), Positives = 183/389 (47%), Gaps = 6/389 (1%)
Query: 84 EWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGR 143
E + + + F+ F M++ Y ++G A V M K G PS+ S +L+ +
Sbjct: 174 ELVSVYREFSFSPTVFDMILKVYAEKGMTKFALCVFDNMGKCGRVPSLRSCNSLLSNLVQ 233
Query: 144 GGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPD 203
G A ++ +M + G P +Y I++ + + + EA F + + E+S +P+
Sbjct: 234 NGEAFKALLVYEQMIALGILPDIFSYTIMVNAYCKEGRVDEA---FNFVKEMERSCCEPN 290
Query: 204 QKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLM---SFETNYKEVSKIYD 260
++ +I Y G A+K+ ALM+E+G+ +++ TY L+ ++ K++
Sbjct: 291 VVTYNSLIDGYVSLGDVCGAKKVLALMSEKGIPENSRTYTLLIKGYCKRGQMEQAEKLFG 350
Query: 261 QMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISG 320
M L D Y +LI+AY A R ++AL + + ML G++ N L++ + G
Sbjct: 351 CMMEKNLFVDEHVYGVLIHAYCTAGRVDDALRIRDAMLKVGLKMNTVICNSLINGYCKLG 410
Query: 321 MVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYG 380
V++A V M+ PD Y T+L + D A K + G V+TY
Sbjct: 411 HVNKAAEVLVSMKDWNLKPDSYGYNTLLDGFCKQEDFIKAFKLCDEMHNKGVNFTVVTYN 470
Query: 381 TLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESC 440
TL+K V ++E + I++ M G+ PN+ + T++DA+ K FD A++ +K+ S
Sbjct: 471 TLLKNLFHVGHVEHALHIWNLMHKRGVAPNEVTYCTLLDAFFKVGTFDRAMMIWKDALSK 530
Query: 441 GFPPDQKAKNILLSLAKTADERNEANELL 469
GF N ++ ++ +A E+
Sbjct: 531 GFTKSITLYNTMICGFCKMEKLVQAQEIF 559
Score = 116 bits (290), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 76/309 (24%), Positives = 155/309 (50%), Gaps = 6/309 (1%)
Query: 98 DFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRM 157
+ +++ AY K+G ++A + M + P+VV++ +L++ Y G A+ + M
Sbjct: 258 SYTIMVNAYCKEGRVDEAFNFVKEMERSCCEPNVVTYNSLIDGYVSLGDVCGAKKVLALM 317
Query: 158 QSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKA 217
G ++ TY +++K + + + ++AE++F ++++ L D+ ++ ++I+ Y A
Sbjct: 318 SEKGIPENSRTYTLLIKGYCKRGQMEQAEKLFGCMMEKN---LFVDEHVYGVLIHAYCTA 374
Query: 218 GGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSK---IYDQMQRAGLQPDVVSY 274
G + A ++ M + G++ +TV NSL++ V+K + M+ L+PD Y
Sbjct: 375 GRVDDALRIRDAMLKVGLKMNTVICNSLINGYCKLGHVNKAAEVLVSMKDWNLKPDSYGY 434
Query: 275 ALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRR 334
L++ + K +A + +EM + GV T YN LL G V+ A ++ M +
Sbjct: 435 NTLLDGFCKQEDFIKAFKLCDEMHNKGVNFTVVTYNTLLKNLFHVGHVEHALHIWNLMHK 494
Query: 335 DRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEK 394
+P+ +Y T+L A+ + A ++ GF ++ Y T+I G+ K+ L +
Sbjct: 495 RGVAPNEVTYCTLLDAFFKVGTFDRAMMIWKDALSKGFTKSITLYNTMICGFCKMEKLVQ 554
Query: 395 MMEIYDKMR 403
EI+ KM+
Sbjct: 555 AQEIFLKMK 563
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 86/321 (26%), Positives = 134/321 (41%), Gaps = 21/321 (6%)
Query: 154 FRRMQSSGP--RPSALTYQIILKLFVEANKFKEAEEVFMTLL-------------DEEKS 198
F ++ S P RP +Y I+ + A +KE L+ DE S
Sbjct: 118 FFKLASKQPKFRPDVSSYCKIVHILSRARMYKEVRVYLNELVVLCKNNYIASAVWDELVS 177
Query: 199 PLKP---DQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEV 255
+ +F M++ +Y + G + A +F M + G S + NSL+S E
Sbjct: 178 VYREFSFSPTVFDMILKVYAEKGMTKFALCVFDNMGKCGRVPSLRSCNSLLSNLVQNGEA 237
Query: 256 SK---IYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNIL 312
K +Y+QM G+ PD+ SY +++NAY K R +EA +EM + P YN L
Sbjct: 238 FKALLVYEQMIALGILPDIFSYTIMVNAYCKEGRVDEAFNFVKEMERSCCEPNVVTYNSL 297
Query: 313 LDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGF 372
+D + G V A+ V M + +YT ++ Y ME AEK F + +
Sbjct: 298 IDGYVSLGDVCGAKKVLALMSEKGIPENSRTYTLLIKGYCKRGQMEQAEKLFGCMMEKNL 357
Query: 373 VPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVV 432
+ YG LI Y ++ + I D M G+K N I ++++ Y K + A
Sbjct: 358 FVDEHVYGVLIHAYCTAGRVDDALRIRDAMLKVGLKMNTVICNSLINGYCKLGHVNKAAE 417
Query: 433 WYKEMESCGFPPDQKAKNILL 453
M+ PD N LL
Sbjct: 418 VLVSMKDWNLKPDSYGYNTLL 438
Score = 91.7 bits (226), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 71/284 (25%), Positives = 131/284 (46%), Gaps = 6/284 (2%)
Query: 89 QSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYK 148
+S + N + + LI Y GD A+KVL+ M++KG + ++T L++ Y + G+ +
Sbjct: 284 RSCCEPNVVTYNSLIDGYVSLGDVCGAKKVLALMSEKGIPENSRTYTLLIKGYCKRGQME 343
Query: 149 NAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFH 208
AE +F M Y +++ + A + +A + +L K LK + + +
Sbjct: 344 QAEKLFGCMMEKNLFVDEHVYGVLIHAYCTAGRVDDALRIRDAML---KVGLKMNTVICN 400
Query: 209 MMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLM---SFETNYKEVSKIYDQMQRA 265
+I Y K G KA ++ M + ++ + YN+L+ + ++ + K+ D+M
Sbjct: 401 SLINGYCKLGHVNKAAEVLVSMKDWNLKPDSYGYNTLLDGFCKQEDFIKAFKLCDEMHNK 460
Query: 266 GLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQA 325
G+ VV+Y L+ E AL ++ M GV P Y LLDAF G D+A
Sbjct: 461 GVNFTVVTYNTLLKNLFHVGHVEHALHIWNLMHKRGVAPNEVTYCTLLDAFFKVGTFDRA 520
Query: 326 RTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQ 369
++K + I Y TM+ + + A++ F ++K+
Sbjct: 521 MMIWKDALSKGFTKSITLYNTMICGFCKMEKLVQAQEIFLKMKE 564
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/277 (22%), Positives = 119/277 (42%), Gaps = 21/277 (7%)
Query: 193 LDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNY 252
L ++ +PD + ++++ +A Y++ R V N L+ N
Sbjct: 121 LASKQPKFRPDVSSYCKIVHILSRARMYKEVR---------------VYLNELVVLCKNN 165
Query: 253 KEVSKIYDQM----QRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKA 308
S ++D++ + P V + +++ Y + + AL VF+ M G P+ ++
Sbjct: 166 YIASAVWDELVSVYREFSFSPTV--FDMILKVYAEKGMTKFALCVFDNMGKCGRVPSLRS 223
Query: 309 YNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLK 368
N LL +G +A V++ M PDI SYT M++AY ++ A F + ++
Sbjct: 224 CNSLLSNLVQNGEAFKALLVYEQMIALGILPDIFSYTIMVNAYCKEGRVDEAFNFVKEME 283
Query: 369 QDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFD 428
+ PNV+TY +LI GY + ++ ++ M GI N +T ++ Y K +
Sbjct: 284 RSCCEPNVVTYNSLIDGYVSLGDVCGAKKVLALMSEKGIPENSRTYTLLIKGYCKRGQME 343
Query: 429 SAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEA 465
A + M D+ +L+ TA ++A
Sbjct: 344 QAEKLFGCMMEKNLFVDEHVYGVLIHAYCTAGRVDDA 380
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 47/225 (20%), Positives = 93/225 (41%), Gaps = 23/225 (10%)
Query: 267 LQPDVVSYALLINAYGKARREEE-----------------ALAVFEEMLDA----GVRPT 305
+PDV SY +++ +AR +E A AV++E++ PT
Sbjct: 128 FRPDVSSYCKIVHILSRARMYKEVRVYLNELVVLCKNNYIASAVWDELVSVYREFSFSPT 187
Query: 306 HKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFR 365
++++L +A GM A VF M + P + S ++LS V + A +
Sbjct: 188 --VFDMILKVYAEKGMTKFALCVFDNMGKCGRVPSLRSCNSLLSNLVQNGEAFKALLVYE 245
Query: 366 RLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNK 425
++ G +P++ +Y ++ Y K +++ +M + +PN + +++D Y
Sbjct: 246 QMIALGILPDIFSYTIMVNAYCKEGRVDEAFNFVKEMERSCCEPNVVTYNSLIDGYVSLG 305
Query: 426 DFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLG 470
D A M G P + + +L+ + +A +L G
Sbjct: 306 DVCGAKKVLALMSEKGIPENSRTYTLLIKGYCKRGQMEQAEKLFG 350
>gi|242076206|ref|XP_002448039.1| hypothetical protein SORBIDRAFT_06g020090 [Sorghum bicolor]
gi|241939222|gb|EES12367.1| hypothetical protein SORBIDRAFT_06g020090 [Sorghum bicolor]
Length = 481
Score = 142 bits (357), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 98/341 (28%), Positives = 165/341 (48%), Gaps = 14/341 (4%)
Query: 129 PSVVSHTALMEAYGRGGRYKNAEAIFRRM-QSSGPRPSALTYQIILKLFVEANKFKEAEE 187
P+ V++ ++ + GR + A + R M + G P TY ++ + + + ++A +
Sbjct: 145 PNAVTYNTVIAGFCARGRVQAALEVMREMRERGGIAPDKYTYATLISGWCKIGRMEDAAK 204
Query: 188 VFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMS 247
VF +L + + + P M++ +I Y G + A + M +RGV + TYN L+
Sbjct: 205 VFDEMLTQGE--VAPSAVMYNALIGGYCDRGKLDVALQYREDMVQRGVAMTVATYNLLVH 262
Query: 248 ---FETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRP 304
+ + + ++MQR GL PDV +Y +LIN Y K E++AL VFEEM GVR
Sbjct: 263 ALFMDGRASDAYAVLEEMQRNGLSPDVFTYNILINGYCKEGNEKKALEVFEEMSRKGVRA 322
Query: 305 THKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFF 364
T Y L+ AF+ G V + +FK + PD+ Y +++++ DME A +
Sbjct: 323 TAVTYTSLIYAFSRKGQVQETDRLFKVAVKKGIRPDVVMYNALINSHCAGGDMERAFEIM 382
Query: 365 RRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKN 424
+++ P+ +TY TLI+G+ + L++ + D+M GI+P+ + KN
Sbjct: 383 AEMEKKRIPPDDVTYNTLIRGFCLLGRLDEARGLIDEMTKRGIQPDLGLC--------KN 434
Query: 425 KDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEA 465
D A KEM G PD L+ T DE+ A
Sbjct: 435 GQGDDAENLMKEMVGKGITPDDSTYISLIEGLTTVDEQMSA 475
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 85/376 (22%), Positives = 156/376 (41%), Gaps = 49/376 (13%)
Query: 145 GRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQ 204
G+ A + R+M PRP+A+TY ++ F + + A EV + E+ + PD+
Sbjct: 130 GKPVRALELLRQM----PRPNAVTYNTVIAGFCARGRVQAALEVMREM--RERGGIAPDK 183
Query: 205 KMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSKIYDQMQR 264
+ +I + K G E A +K++D+M
Sbjct: 184 YTYATLISGWCKIGRMEDA--------------------------------AKVFDEMLT 211
Query: 265 AG-LQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVD 323
G + P V Y LI Y + + AL E+M+ GV T YN+L+ A + G
Sbjct: 212 QGEVAPSAVMYNALIGGYCDRGKLDVALQYREDMVQRGVAMTVATYNLLVHALFMDGRAS 271
Query: 324 QARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLI 383
A V + M+R+ SPD+ +Y +++ Y + + A + F + + G +TY +LI
Sbjct: 272 DAYAVLEEMQRNGLSPDVFTYNILINGYCKEGNEKKALEVFEEMSRKGVRATAVTYTSLI 331
Query: 384 KGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFP 443
+++ +++ ++ GI+P+ ++ +++++ D + A EME P
Sbjct: 332 YAFSRKGQVQETDRLFKVAVKKGIRPDVVMYNALINSHCAGGDMERAFEIMAEMEKKRIP 391
Query: 444 PDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGINGLSISVDEEDDDDDDDEDDDD 503
PD N L+ +EA L+ +P + GL + DD +
Sbjct: 392 PDDVTYNTLIRGFCLLGRLDEARGLIDEMTKRGIQPDL-GLC---------KNGQGDDAE 441
Query: 504 NIYHDGDGDGDGDDNE 519
N+ + G G D+
Sbjct: 442 NLMKEMVGKGITPDDS 457
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 86/354 (24%), Positives = 148/354 (41%), Gaps = 50/354 (14%)
Query: 41 VGSAVAVLRSERTRGQPLPKDLVLGTLVR-LKQLKKWNVVSEVLEWLRIQSWWDFNEMDF 99
V +A+ V+R R RG P TL+ ++ + ++V + + Q + + +
Sbjct: 163 VQAALEVMREMRERGGIAPDKYTYATLISGWCKIGRMEDAAKVFDEMLTQGEVAPSAVMY 222
Query: 100 LMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQS 159
LI Y +G + A + M ++G A +V ++ L+ A GR +A A+ MQ
Sbjct: 223 NALIGGYCDRGKLDVALQYREDMVQRGVAMTVATYNLLVHALFMDGRASDAYAVLEEMQR 282
Query: 160 SGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGG 219
+G P TY I++ + + K+A EVF EE
Sbjct: 283 NGLSPDVFTYNILINGYCKEGNEKKALEVF-----EE----------------------- 314
Query: 220 YEKARKLFALMAERGVQQSTVTYNSLM---SFETNYKEVSKIYDQMQRAGLQPDVVSYAL 276
M+ +GV+ + VTY SL+ S + +E +++ + G++PDVV Y
Sbjct: 315 ----------MSRKGVRATAVTYTSLIYAFSRKGQVQETDRLFKVAVKKGIRPDVVMYNA 364
Query: 277 LINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDR 336
LIN++ E A + EM + P YN L+ F + G +D+AR + M +
Sbjct: 365 LINSHCAGGDMERAFEIMAEMEKKRIPPDDVTYNTLIRGFCLLGRLDEARGLIDEMTKRG 424
Query: 337 CSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVN 390
PD+ + AE + + G P+ TY +LI+G V+
Sbjct: 425 IQPDL--------GLCKNGQGDDAENLMKEMVGKGITPDDSTYISLIEGLTTVD 470
>gi|357494043|ref|XP_003617310.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355518645|gb|AET00269.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 716
Score = 142 bits (357), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 93/384 (24%), Positives = 174/384 (45%), Gaps = 22/384 (5%)
Query: 82 VLEWLRIQSWWD----FNEM----------DFLMLITAYGKQGDFNKAEKVLSFMNKKGY 127
++E R + W+ FNEM F ++ + + G+ +A M G
Sbjct: 336 LVESCRKEDVWEAERVFNEMLQRGVVPDLISFSSIVGVFSRNGELGRALAYFEKMKGVGL 395
Query: 128 APSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEE 187
P V +T L+ Y R A + M G +TY +L +A+E
Sbjct: 396 VPDTVIYTILINGYCRNDDVSGALKMRNEMVERGCVMDVVTYNTLLNGLCRGKMLDDADE 455
Query: 188 VFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMS 247
+F +++ + PD +I+ Y K G KA LF M R ++ VTYN+LM
Sbjct: 456 LFKEMVERG---VFPDFYTLTTLIHGYCKDGNMTKALSLFETMTLRSLKPDVVTYNTLMD 512
Query: 248 FETNYKEVSKI----YDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVR 303
E+ K YD + R + P +S+++LIN + EA +++EM + G++
Sbjct: 513 GFCKVGEMEKAKELWYDMISRE-IFPSYISFSILINGFCSLGLVSEAFRLWDEMKEKGIK 571
Query: 304 PTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKF 363
PT N ++ + +G + +A M + PD +Y T+++++V + + A
Sbjct: 572 PTLVTCNTIIKGYLRAGNLSKANDFLNTMISEGVPPDCITYNTLINSFVKEENFDRAFFL 631
Query: 364 FRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGK 423
+++ G +PN++TY ++ G+++ +++ + KM GI P+++ +T++++ Y
Sbjct: 632 INNMEERGLLPNLVTYNAILGGFSRHGRMQEAEMVLHKMIDKGINPDKSTYTSLINGYVS 691
Query: 424 NKDFDSAVVWYKEMESCGFPPDQK 447
+ A + EM GF PD K
Sbjct: 692 KDNMKEAFRVHDEMLQRGFVPDDK 715
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 102/416 (24%), Positives = 182/416 (43%), Gaps = 39/416 (9%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
L+ AY ++G ++A ++ M KG P + ++ AL+ + G Y+ A+ + M G
Sbjct: 265 LVNAYCRRGLVSEAFGLVDCMAGKGLKPGLFTYNALINGLCKEGSYERAKRVLDEMLGVG 324
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSP---------------------- 199
P+A T+ +L EAE VF +L P
Sbjct: 325 LCPNAATFNPMLVESCRKEDVWEAERVFNEMLQRGVVPDLISFSSIVGVFSRNGELGRAL 384
Query: 200 ----------LKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFE 249
L PD ++ ++I Y + A K+ M ERG VTYN+L++
Sbjct: 385 AYFEKMKGVGLVPDTVIYTILINGYCRNDDVSGALKMRNEMVERGCVMDVVTYNTLLNGL 444
Query: 250 TNYK---EVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTH 306
K + +++ +M G+ PD + LI+ Y K +AL++FE M ++P
Sbjct: 445 CRGKMLDDADELFKEMVERGVFPDFYTLTTLIHGYCKDGNMTKALSLFETMTLRSLKPDV 504
Query: 307 KAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRR 366
YN L+D F G +++A+ ++ M P S++ +++ + + + A + +
Sbjct: 505 VTYNTLMDGFCKVGEMEKAKELWYDMISREIFPSYISFSILINGFCSLGLVSEAFRLWDE 564
Query: 367 LKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKD 426
+K+ G P ++T T+IKGY + NL K + + M G+ P+ + T+++++ K ++
Sbjct: 565 MKEKGIKPTLVTCNTIIKGYLRAGNLSKANDFLNTMISEGVPPDCITYNTLINSFVKEEN 624
Query: 427 FDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGIN 482
FD A ME G P+ N +L EA +L H + GIN
Sbjct: 625 FDRAFFLINNMEERGLLPNLVTYNAILGGFSRHGRMQEAEMVL----HKMIDKGIN 676
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 84/368 (22%), Positives = 175/368 (47%), Gaps = 7/368 (1%)
Query: 101 MLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSS 160
ML+ + K+ D +AE+V + M ++G P ++S ++++ + R G A A F +M+
Sbjct: 335 MLVESCRKE-DVWEAERVFNEMLQRGVVPDLISFSSIVGVFSRNGELGRALAYFEKMKGV 393
Query: 161 GPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGY 220
G P + Y I++ + + A ++ +++ D ++ ++ +
Sbjct: 394 GLVPDTVIYTILINGYCRNDDVSGALKMRNEMVERG---CVMDVVTYNTLLNGLCRGKML 450
Query: 221 EKARKLFALMAERGVQQSTVTYNSLM---SFETNYKEVSKIYDQMQRAGLQPDVVSYALL 277
+ A +LF M ERGV T +L+ + N + +++ M L+PDVV+Y L
Sbjct: 451 DDADELFKEMVERGVFPDFYTLTTLIHGYCKDGNMTKALSLFETMTLRSLKPDVVTYNTL 510
Query: 278 INAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRC 337
++ + K E+A ++ +M+ + P++ +++IL++ F G+V +A ++ M+
Sbjct: 511 MDGFCKVGEMEKAKELWYDMISREIFPSYISFSILINGFCSLGLVSEAFRLWDEMKEKGI 570
Query: 338 SPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMME 397
P + + T++ Y+ A ++ A F + +G P+ ITY TLI + K N ++
Sbjct: 571 KPTLVTCNTIIKGYLRAGNLSKANDFLNTMISEGVPPDCITYNTLINSFVKEENFDRAFF 630
Query: 398 IYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAK 457
+ + M G+ PN + I+ + ++ A + +M G PD+ L++
Sbjct: 631 LINNMEERGLLPNLVTYNAILGGFSRHGRMQEAEMVLHKMIDKGINPDKSTYTSLINGYV 690
Query: 458 TADERNEA 465
+ D EA
Sbjct: 691 SKDNMKEA 698
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 96/390 (24%), Positives = 183/390 (46%), Gaps = 17/390 (4%)
Query: 61 DLVLGTLVRLKQLKKWNVVSEVLEWLRIQSWW-DFNEMDFLMLITAYGKQGDFNKAEKVL 119
DL++ T V+ ++L++ SE + LR + + N + L+ A K G + A KV
Sbjct: 158 DLLIRTYVQARKLREG---SEAFQLLRKRGFCVSINACN--ALLGAIVKVGWVDLAWKVY 212
Query: 120 SFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEA 179
K G +V + ++ A + G+ N M+ G +TY ++ +
Sbjct: 213 EDFVKSGNIVNVYTLNIMVNALCKDGKLDNVGVYLSEMEEKGVYADLVTYNTLVNAYCRR 272
Query: 180 NKFKEAEEVFMTLLDEEKSP-LKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQS 238
EA L+D LKP ++ +I K G YE+A+++ M G+ +
Sbjct: 273 GLVSEA----FGLVDCMAGKGLKPGLFTYNALINGLCKEGSYERAKRVLDEMLGVGLCPN 328
Query: 239 TVTYNSLMSFETNYKE----VSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVF 294
T+N ++ E+ KE +++++M + G+ PD++S++ ++ + + ALA F
Sbjct: 329 AATFNPML-VESCRKEDVWEAERVFNEMLQRGVVPDLISFSSIVGVFSRNGELGRALAYF 387
Query: 295 EEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNA 354
E+M G+ P Y IL++ + + V A + M C D+ +Y T+L+
Sbjct: 388 EKMKGVGLVPDTVIYTILINGYCRNDDVSGALKMRNEMVERGCVMDVVTYNTLLNGLCRG 447
Query: 355 SDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIF 414
++ A++ F+ + + G P+ T TLI GY K N+ K + +++ M + +KP+ +
Sbjct: 448 KMLDDADELFKEMVERGVFPDFYTLTTLIHGYCKDGNMTKALSLFETMTLRSLKPDVVTY 507
Query: 415 TTIMDAYGKNKDFDSAV-VWYKEMESCGFP 443
T+MD + K + + A +WY + FP
Sbjct: 508 NTLMDGFCKVGEMEKAKELWYDMISREIFP 537
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 70/307 (22%), Positives = 139/307 (45%), Gaps = 6/307 (1%)
Query: 166 ALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARK 225
+ + ++++ +V+A K +E E F L K + ++ K G + A K
Sbjct: 154 VVVFDLLIRTYVQARKLREGSEAFQLL---RKRGFCVSINACNALLGAIVKVGWVDLAWK 210
Query: 226 LFALMAERGVQQSTVTYNSL---MSFETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYG 282
++ + G + T N + + + V +M+ G+ D+V+Y L+NAY
Sbjct: 211 VYEDFVKSGNIVNVYTLNIMVNALCKDGKLDNVGVYLSEMEEKGVYADLVTYNTLVNAYC 270
Query: 283 KARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDIC 342
+ EA + + M G++P YN L++ G ++A+ V M P+
Sbjct: 271 RRGLVSEAFGLVDCMAGKGLKPGLFTYNALINGLCKEGSYERAKRVLDEMLGVGLCPNAA 330
Query: 343 SYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKM 402
++ ML D+ AE+ F + Q G VP++I++ +++ +++ L + + ++KM
Sbjct: 331 TFNPMLVESCRKEDVWEAERVFNEMLQRGVVPDLISFSSIVGVFSRNGELGRALAYFEKM 390
Query: 403 RVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADER 462
+ G+ P+ I+T +++ Y +N D A+ EM G D N LL+
Sbjct: 391 KGVGLVPDTVIYTILINGYCRNDDVSGALKMRNEMVERGCVMDVVTYNTLLNGLCRGKML 450
Query: 463 NEANELL 469
++A+EL
Sbjct: 451 DDADELF 457
Score = 98.6 bits (244), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 82/350 (23%), Positives = 150/350 (42%), Gaps = 41/350 (11%)
Query: 99 FLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQ 158
F +LI Y + + + + K+G+ S+ + AL+ A + G A ++
Sbjct: 157 FDLLIRTYVQARKLREGSEAFQLLRKRGFCVSINACNALLGAIVKVGWVDLAWKVYEDFV 216
Query: 159 SSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAG 218
SG + T I++ + L D K+ ++ +Y+ +
Sbjct: 217 KSGNIVNVYTLNIMV------------------------NALCKDGKLDNVGVYLSE--- 249
Query: 219 GYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSKIY---DQMQRAGLQPDVVSYA 275
M E+GV VTYN+L++ VS+ + D M GL+P + +Y
Sbjct: 250 -----------MEEKGVYADLVTYNTLVNAYCRRGLVSEAFGLVDCMAGKGLKPGLFTYN 298
Query: 276 LLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRD 335
LIN K E A V +EML G+ P +N +L V +A VF M +
Sbjct: 299 ALINGLCKEGSYERAKRVLDEMLGVGLCPNAATFNPMLVESCRKEDVWEAERVFNEMLQR 358
Query: 336 RCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKM 395
PD+ S+++++ + ++ A +F ++K G VP+ + Y LI GY + +++
Sbjct: 359 GVVPDLISFSSIVGVFSRNGELGRALAYFEKMKGVGLVPDTVIYTILINGYCRNDDVSGA 418
Query: 396 MEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPD 445
+++ ++M G + + T+++ + K D A +KEM G PD
Sbjct: 419 LKMRNEMVERGCVMDVVTYNTLLNGLCRGKMLDDADELFKEMVERGVFPD 468
>gi|302818914|ref|XP_002991129.1| hypothetical protein SELMODRAFT_236212 [Selaginella moellendorffii]
gi|300141060|gb|EFJ07775.1| hypothetical protein SELMODRAFT_236212 [Selaginella moellendorffii]
Length = 614
Score = 142 bits (357), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 93/395 (23%), Positives = 180/395 (45%), Gaps = 13/395 (3%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + + LI K + ++A+++ M +PS+V++ L++ R G+ + A A+F
Sbjct: 113 NVVTYNSLIDGLCKNNEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGKLERAMALF 172
Query: 155 RRM-------QSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMF 207
+ M P+ +TY +++ +AN+ +A E+ ++ + PD +
Sbjct: 173 QEMLDRRSHDMDDRCSPNVITYSVLIDGLCKANRVSQAVELLESM---KARGCSPDVITY 229
Query: 208 HMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVS---KIYDQMQR 264
+++ K A ++ M + G + VTYNSL+ + VS + M
Sbjct: 230 TILVDGLCKESKVAAAWEVLREMLDAGCVPNLVTYNSLLHGLCRARRVSDALALMRDMTC 289
Query: 265 AGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQ 324
G P+VV+Y LI+ K R ++A A+ +M+D G P YN+L++ + VD+
Sbjct: 290 RGCTPNVVTYGTLIDGLCKVGRVKDACAMLADMIDKGGTPDLMIYNMLINGLCKADQVDE 349
Query: 325 ARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIK 384
+ + + PD+ +Y++++ ++ ++ A + +K G P+VI Y TLI
Sbjct: 350 SIALLRRAVSGGIKPDVVTYSSVIYGLCRSNRLDEACRLLLYVKSRGCPPDVILYSTLID 409
Query: 385 GYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPP 444
G K +++ ++Y+ M +G + ++T++D K D A + M G PP
Sbjct: 410 GLCKAGKVDEAFDLYEVMAGDGCDADVVTYSTLIDGLCKAGRVDEAHLLLARMVRMGTPP 469
Query: 445 DQKAKNILLSLAKTADERNEANELLGNFNHPNNEP 479
N L+ + +EA EL+ N P
Sbjct: 470 STMTYNSLIKGLCDLNHLDEAIELVEEMERSNCAP 504
Score = 138 bits (347), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 93/388 (23%), Positives = 168/388 (43%), Gaps = 7/388 (1%)
Query: 99 FLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQ 158
+ L++ K+ ++A +L M G P+VV++ +L++ + A+ +F M+
Sbjct: 82 YTALLSGLWKEKRLDQALAILHEMRDHGCEPNVVTYNSLIDGLCKNNEPDRAQELFEHMK 141
Query: 159 SSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPL----KPDQKMFHMMIYMY 214
S PS +TY +L K + A +F +LD + P+ + ++I
Sbjct: 142 SVECSPSMVTYNTLLDGLFRTGKLERAMALFQEMLDRRSHDMDDRCSPNVITYSVLIDGL 201
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSL---MSFETNYKEVSKIYDQMQRAGLQPDV 271
KA +A +L M RG +TY L + E+ ++ +M AG P++
Sbjct: 202 CKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAAAWEVLREMLDAGCVPNL 261
Query: 272 VSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKC 331
V+Y L++ +ARR +ALA+ +M G P Y L+D G V A +
Sbjct: 262 VTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDGLCKVGRVKDACAMLAD 321
Query: 332 MRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNN 391
M +PD+ Y +++ A ++ + RR G P+V+TY ++I G + N
Sbjct: 322 MIDKGGTPDLMIYNMLINGLCKADQVDESIALLRRAVSGGIKPDVVTYSSVIYGLCRSNR 381
Query: 392 LEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNI 451
L++ + ++ G P+ +++T++D K D A Y+ M G D +
Sbjct: 382 LDEACRLLLYVKSRGCPPDVILYSTLIDGLCKAGKVDEAFDLYEVMAGDGCDADVVTYST 441
Query: 452 LLSLAKTADERNEANELLGNFNHPNNEP 479
L+ A +EA+ LL P
Sbjct: 442 LIDGLCKAGRVDEAHLLLARMVRMGTPP 469
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 86/351 (24%), Positives = 158/351 (45%), Gaps = 13/351 (3%)
Query: 129 PSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEV 188
P V ++ AL+ + RGG A+ F M+S P+ I++ +A + +A
Sbjct: 7 PDVYTYAALLRGFCRGGEIDQAQRCFDEMRSKNLVPNVFLCSILIDGLCKAKRSIDALRC 66
Query: 189 FMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSF 248
F + + S + D ++ ++ K ++A + M + G + + VTYNSL+
Sbjct: 67 FRAM---QGSGIVADTVIYTALLSGLWKEKRLDQALAILHEMRDHGCEPNVVTYNSLIDG 123
Query: 249 ETNYKE---VSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDA----- 300
E ++++ M+ P +V+Y L++ + + E A+A+F+EMLD
Sbjct: 124 LCKNNEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGKLERAMALFQEMLDRRSHDM 183
Query: 301 --GVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDME 358
P Y++L+D + V QA + + M+ CSPD+ +YT ++ S +
Sbjct: 184 DDRCSPNVITYSVLIDGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVA 243
Query: 359 GAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIM 418
A + R + G VPN++TY +L+ G + + + + M G PN + T++
Sbjct: 244 AAWEVLREMLDAGCVPNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLI 303
Query: 419 DAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELL 469
D K A +M G PD N+L++ AD+ +E+ LL
Sbjct: 304 DGLCKVGRVKDACAMLADMIDKGGTPDLMIYNMLINGLCKADQVDESIALL 354
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 83/348 (23%), Positives = 169/348 (48%), Gaps = 6/348 (1%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + + +LI K ++A ++L M +G +P V+++T L++ + + A +
Sbjct: 190 NVITYSVLIDGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAAAWEVL 249
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
R M +G P+ +TY +L A + +A + D P+ + +I
Sbjct: 250 REMLDAGCVPNLVTYNSLLHGLCRARRVSDA---LALMRDMTCRGCTPNVVTYGTLIDGL 306
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSKIYDQMQRA---GLQPDV 271
K G + A + A M ++G + YN L++ +V + ++RA G++PDV
Sbjct: 307 CKVGRVKDACAMLADMIDKGGTPDLMIYNMLINGLCKADQVDESIALLRRAVSGGIKPDV 366
Query: 272 VSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKC 331
V+Y+ +I ++ R +EA + + G P Y+ L+D +G VD+A +++
Sbjct: 367 VTYSSVIYGLCRSNRLDEACRLLLYVKSRGCPPDVILYSTLIDGLCKAGKVDEAFDLYEV 426
Query: 332 MRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNN 391
M D C D+ +Y+T++ A ++ A R+ + G P+ +TY +LIKG +N+
Sbjct: 427 MAGDGCDADVVTYSTLIDGLCKAGRVDEAHLLLARMVRMGTPPSTMTYNSLIKGLCDLNH 486
Query: 392 LEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMES 439
L++ +E+ ++M + P+ + ++ + + DSAVV ++ ++
Sbjct: 487 LDEAIELVEEMERSNCAPSAVTYNILIHGMCRMERVDSAVVLLEQAKA 534
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 93/412 (22%), Positives = 185/412 (44%), Gaps = 13/412 (3%)
Query: 68 VRLKQLKKWNVVSEVLEWLRIQSWWDFNE--MDFLMLITAYGKQGDFNKAEKVLSFMNKK 125
V + L K N VS+ +E L + + + +L+ K+ A +VL M
Sbjct: 196 VLIDGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAAAWEVLREMLDA 255
Query: 126 GYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEA 185
G P++V++ +L+ R R +A A+ R M G P+ +TY ++ + + K+A
Sbjct: 256 GCVPNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDGLCKVGRVKDA 315
Query: 186 EEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSL 245
+ ++D+ +P D +++M+I KA +++ L G++ VTY+S+
Sbjct: 316 CAMLADMIDKGGTP---DLMIYNMLINGLCKADQVDESIALLRRAVSGGIKPDVVTYSSV 372
Query: 246 ---MSFETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGV 302
+ E ++ ++ G PDV+ Y+ LI+ KA + +EA ++E M G
Sbjct: 373 IYGLCRSNRLDEACRLLLYVKSRGCPPDVILYSTLIDGLCKAGKVDEAFDLYEVMAGDGC 432
Query: 303 RPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEK 362
Y+ L+D +G VD+A + M R P +Y +++ + + ++ A +
Sbjct: 433 DADVVTYSTLIDGLCKAGRVDEAHLLLARMVRMGTPPSTMTYNSLIKGLCDLNHLDEAIE 492
Query: 363 FFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTI----- 417
+++ P+ +TY LI G ++ ++ + + ++ + + T TI
Sbjct: 493 LVEEMERSNCAPSAVTYNILIHGMCRMERVDSAVVLLEQAKARCVAAGGTALDTIAYSSL 552
Query: 418 MDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELL 469
+D K A+ +++EM G PD +ILL K + + +E L+
Sbjct: 553 IDGLCKAGRVAEALDYFQEMIDNGVIPDHITYSILLEGLKKSKDLHELRHLV 604
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 90/378 (23%), Positives = 163/378 (43%), Gaps = 13/378 (3%)
Query: 101 MLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSS 160
+LI K A + M G V +TAL+ + R A AI M+
Sbjct: 49 ILIDGLCKAKRSIDALRCFRAMQGSGIVADTVIYTALLSGLWKEKRLDQALAILHEMRDH 108
Query: 161 GPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGY 220
G P+ +TY ++ + N+ A+E+F + E S P ++ ++ + G
Sbjct: 109 GCEPNVVTYNSLIDGLCKNNEPDRAQELFEHMKSVECS---PSMVTYNTLLDGLFRTGKL 165
Query: 221 EKARKLFALMAER-------GVQQSTVTYNSLMSFETNYKEVSK---IYDQMQRAGLQPD 270
E+A LF M +R + +TY+ L+ VS+ + + M+ G PD
Sbjct: 166 ERAMALFQEMLDRRSHDMDDRCSPNVITYSVLIDGLCKANRVSQAVELLESMKARGCSPD 225
Query: 271 VVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFK 330
V++Y +L++ K + A V EMLDAG P YN LL + V A + +
Sbjct: 226 VITYTILVDGLCKESKVAAAWEVLREMLDAGCVPNLVTYNSLLHGLCRARRVSDALALMR 285
Query: 331 CMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVN 390
M C+P++ +Y T++ ++ A + G P+++ Y LI G K +
Sbjct: 286 DMTCRGCTPNVVTYGTLIDGLCKVGRVKDACAMLADMIDKGGTPDLMIYNMLINGLCKAD 345
Query: 391 NLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKN 450
+++ + + + GIKP+ +++++ ++ D A ++S G PPD +
Sbjct: 346 QVDESIALLRRAVSGGIKPDVVTYSSVIYGLCRSNRLDEACRLLLYVKSRGCPPDVILYS 405
Query: 451 ILLSLAKTADERNEANEL 468
L+ A + +EA +L
Sbjct: 406 TLIDGLCKAGKVDEAFDL 423
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 76/329 (23%), Positives = 149/329 (45%), Gaps = 6/329 (1%)
Query: 128 APSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEE 187
+P+V++++ L++ + R A + M++ G P +TY I++ + +K A E
Sbjct: 188 SPNVITYSVLIDGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAAAWE 247
Query: 188 VFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSL-- 245
V +LD + P+ ++ +++ +A A L M RG + VTY +L
Sbjct: 248 VLREMLD---AGCVPNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLID 304
Query: 246 -MSFETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRP 304
+ K+ + M G PD++ Y +LIN KA + +E++A+ + G++P
Sbjct: 305 GLCKVGRVKDACAMLADMIDKGGTPDLMIYNMLINGLCKADQVDESIALLRRAVSGGIKP 364
Query: 305 THKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFF 364
Y+ ++ S +D+A + ++ C PD+ Y+T++ A ++ A +
Sbjct: 365 DVVTYSSVIYGLCRSNRLDEACRLLLYVKSRGCPPDVILYSTLIDGLCKAGKVDEAFDLY 424
Query: 365 RRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKN 424
+ DG +V+TY TLI G K +++ + +M G P+ + +++
Sbjct: 425 EVMAGDGCDADVVTYSTLIDGLCKAGRVDEAHLLLARMVRMGTPPSTMTYNSLIKGLCDL 484
Query: 425 KDFDSAVVWYKEMESCGFPPDQKAKNILL 453
D A+ +EME P NIL+
Sbjct: 485 NHLDEAIELVEEMERSNCAPSAVTYNILI 513
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/231 (23%), Positives = 101/231 (43%), Gaps = 11/231 (4%)
Query: 268 QPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQART 327
QPDV +YA L+ + + ++A F+EM + P +IL+D + A
Sbjct: 6 QPDVYTYAALLRGFCRGGEIDQAQRCFDEMRSKNLVPNVFLCSILIDGLCKAKRSIDALR 65
Query: 328 VFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYA 387
F+ M+ D YT +LS ++ A ++ G PNV+TY +LI G
Sbjct: 66 CFRAMQGSGIVADTVIYTALLSGLWKEKRLDQALAILHEMRDHGCEPNVVTYNSLIDGLC 125
Query: 388 KVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEM---------E 438
K N ++ E+++ M+ P+ + T++D + + A+ ++EM +
Sbjct: 126 KNNEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGKLERAMALFQEMLDRRSHDMDD 185
Query: 439 SCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGINGLSISVD 489
C P+ ++L+ A+ ++A ELL + P + +I VD
Sbjct: 186 RCS--PNVITYSVLIDGLCKANRVSQAVELLESMKARGCSPDVITYTILVD 234
Score = 65.1 bits (157), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 35/145 (24%), Positives = 61/145 (42%)
Query: 337 CSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMM 396
C PD+ +Y +L + +++ A++ F ++ VPNV LI G K +
Sbjct: 5 CQPDVYTYAALLRGFCRGGEIDQAQRCFDEMRSKNLVPNVFLCSILIDGLCKAKRSIDAL 64
Query: 397 EIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLA 456
+ M+ +GI + I+T ++ K K D A+ EM G P+ N L+
Sbjct: 65 RCFRAMQGSGIVADTVIYTALLSGLWKEKRLDQALAILHEMRDHGCEPNVVTYNSLIDGL 124
Query: 457 KTADERNEANELLGNFNHPNNEPGI 481
+E + A EL + P +
Sbjct: 125 CKNNEPDRAQELFEHMKSVECSPSM 149
>gi|449455469|ref|XP_004145475.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g19890-like [Cucumis sativus]
Length = 728
Score = 142 bits (357), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 93/342 (27%), Positives = 171/342 (50%), Gaps = 7/342 (2%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N +++ +I+ K+G +A ++L M K G+ P+V +HT+L+ + G + A +F
Sbjct: 313 NLINYSSMISGLCKRGSVKQAFELLEEMVKNGWKPNVYTHTSLIHGLCKKGWTERAFRLF 372
Query: 155 RRM-QSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYM 213
++ +S +P+ TY ++ + + K AE +F + ++ L P+ + +I
Sbjct: 373 LKLIRSDNYKPNVHTYTAMISGYCKEEKLSRAEMLFERM---KEQGLVPNTNTYTTLIDG 429
Query: 214 YKKAGGYEKARKLFALMAERGVQQSTVTYNSL---MSFETNYKEVSKIYDQMQRAGLQPD 270
+ KAG + KA +L LM+ G +T TYNS+ + +E K+ + + ++ D
Sbjct: 430 HCKAGNFSKAYELMELMSNEGFFPNTCTYNSIVDGLCKRGRAEEAFKLLNTGFQNQIEAD 489
Query: 271 VVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFK 330
V+Y +LI+ K +AL +M G +P Y L+ AF M+ + +F
Sbjct: 490 GVTYTILISEQCKRADMNQALVFLNKMFKVGFQPDIHLYTTLIAAFCRQNMMKDSEKLFD 549
Query: 331 CMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVN 390
+ + +P +YT+M+ Y + A KFF+++ G P+ I+YG LI G K +
Sbjct: 550 EVIKLGLAPTKETYTSMICGYCREKKVSLAVKFFQKMSDHGCAPDSISYGALISGLCKES 609
Query: 391 NLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVV 432
L++ ++YD M G+ P + T+ Y K +DF SA+V
Sbjct: 610 RLDEARQLYDTMIDKGLSPCEVTRVTLTYEYCKTEDFASAMV 651
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 86/372 (23%), Positives = 178/372 (47%), Gaps = 9/372 (2%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
+I Y + G+ +A++ + M ++G+ + T ++ A+ A F ++ G
Sbjct: 250 IIVGYCRNGNVLEADRWICEMMERGFVVDNATLTLIITAFCEKSLVNRAVWFFHKVTKMG 309
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEE-KSPLKPDQKMFHMMIYMYKKAGGY 220
P+ + Y ++ + K+A E LL+E K+ KP+ +I+ K G
Sbjct: 310 LSPNLINYSSMISGLCKRGSVKQAFE----LLEEMVKNGWKPNVYTHTSLIHGLCKKGWT 365
Query: 221 EKARKLFA-LMAERGVQQSTVTYNSLMSFETNYKEVSK---IYDQMQRAGLQPDVVSYAL 276
E+A +LF L+ + + TY +++S +++S+ ++++M+ GL P+ +Y
Sbjct: 366 ERAFRLFLKLIRSDNYKPNVHTYTAMISGYCKEEKLSRAEMLFERMKEQGLVPNTNTYTT 425
Query: 277 LINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDR 336
LI+ + KA +A + E M + G P YN ++D G ++A + +++
Sbjct: 426 LIDGHCKAGNFSKAYELMELMSNEGFFPNTCTYNSIVDGLCKRGRAEEAFKLLNTGFQNQ 485
Query: 337 CSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMM 396
D +YT ++S +DM A F ++ + GF P++ Y TLI + + N ++
Sbjct: 486 IEADGVTYTILISEQCKRADMNQALVFLNKMFKVGFQPDIHLYTTLIAAFCRQNMMKDSE 545
Query: 397 EIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLA 456
+++D++ G+ P + +T+++ Y + K AV ++++M G PD + L+S
Sbjct: 546 KLFDEVIKLGLAPTKETYTSMICGYCREKKVSLAVKFFQKMSDHGCAPDSISYGALISGL 605
Query: 457 KTADERNEANEL 468
+EA +L
Sbjct: 606 CKESRLDEARQL 617
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 78/328 (23%), Positives = 136/328 (41%), Gaps = 46/328 (14%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPS--VVSHTALMEAYGRGGRYKNAEAIFRRMQS 159
++ + + G +A ++ M +G + V++ L+ A R Y A +F M +
Sbjct: 180 MVGVFAEIGKLKEAVDMILDMRNQGLVLTTRVMNRIILVAAEMRLVEY--AGNVFDEMSA 237
Query: 160 SGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGG 219
G P + TY+ I I Y + G
Sbjct: 238 RGVYPDSCTYKYI--------------------------------------IVGYCRNGN 259
Query: 220 YEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSK---IYDQMQRAGLQPDVVSYAL 276
+A + M ERG T +++ V++ + ++ + GL P++++Y+
Sbjct: 260 VLEADRWICEMMERGFVVDNATLTLIITAFCEKSLVNRAVWFFHKVTKMGLSPNLINYSS 319
Query: 277 LINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQA-RTVFKCMRRD 335
+I+ K ++A + EEM+ G +P + L+ G ++A R K +R D
Sbjct: 320 MISGLCKRGSVKQAFELLEEMVKNGWKPNVYTHTSLIHGLCKKGWTERAFRLFLKLIRSD 379
Query: 336 RCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKM 395
P++ +YT M+S Y + AE F R+K+ G VPN TY TLI G+ K N K
Sbjct: 380 NYKPNVHTYTAMISGYCKEEKLSRAEMLFERMKEQGLVPNTNTYTTLIDGHCKAGNFSKA 439
Query: 396 MEIYDKMRVNGIKPNQTIFTTIMDAYGK 423
E+ + M G PN + +I+D K
Sbjct: 440 YELMELMSNEGFFPNTCTYNSIVDGLCK 467
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 69/285 (24%), Positives = 131/285 (45%), Gaps = 7/285 (2%)
Query: 170 QIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFAL 229
+ ++ +F E K KEA ++ +LD L ++ + +I + + E A +F
Sbjct: 178 ECMVGVFAEIGKLKEAVDM---ILDMRNQGLVLTTRVMNRIILVAAEMRLVEYAGNVFDE 234
Query: 230 MAERGVQQSTVTYNSLM---SFETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARR 286
M+ RGV + TY ++ N E + +M G D + L+I A+ +
Sbjct: 235 MSARGVYPDSCTYKYIIVGYCRNGNVLEADRWICEMMERGFVVDNATLTLIITAFCEKSL 294
Query: 287 EEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTT 346
A+ F ++ G+ P Y+ ++ G V QA + + M ++ P++ ++T+
Sbjct: 295 VNRAVWFFHKVTKMGLSPNLINYSSMISGLCKRGSVKQAFELLEEMVKNGWKPNVYTHTS 354
Query: 347 MLSAYVNASDMEGAEKFFRRL-KQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVN 405
++ E A + F +L + D + PNV TY +I GY K L + ++++M+
Sbjct: 355 LIHGLCKKGWTERAFRLFLKLIRSDNYKPNVHTYTAMISGYCKEEKLSRAEMLFERMKEQ 414
Query: 406 GIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKN 450
G+ PN +TT++D + K +F A + M + GF P+ N
Sbjct: 415 GLVPNTNTYTTLIDGHCKAGNFSKAYELMELMSNEGFFPNTCTYN 459
Score = 85.9 bits (211), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 61/277 (22%), Positives = 128/277 (46%), Gaps = 4/277 (1%)
Query: 197 KSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEV- 255
K L+ ++ M+ ++ + G ++A + M +G+ +T N ++ + V
Sbjct: 167 KCNLERAHEVVECMVGVFAEIGKLKEAVDMILDMRNQGLVLTTRVMNRIILVAAEMRLVE 226
Query: 256 --SKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILL 313
++D+M G+ PD +Y +I Y + EA EM++ G + +++
Sbjct: 227 YAGNVFDEMSARGVYPDSCTYKYIIVGYCRNGNVLEADRWICEMMERGFVVDNATLTLII 286
Query: 314 DAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFV 373
AF +V++A F + + SP++ +Y++M+S ++ A + + ++G+
Sbjct: 287 TAFCEKSLVNRAVWFFHKVTKMGLSPNLINYSSMISGLCKRGSVKQAFELLEEMVKNGWK 346
Query: 374 PNVITYGTLIKGYAKVNNLEKMMEIYDKM-RVNGIKPNQTIFTTIMDAYGKNKDFDSAVV 432
PNV T+ +LI G K E+ ++ K+ R + KPN +T ++ Y K + A +
Sbjct: 347 PNVYTHTSLIHGLCKKGWTERAFRLFLKLIRSDNYKPNVHTYTAMISGYCKEEKLSRAEM 406
Query: 433 WYKEMESCGFPPDQKAKNILLSLAKTADERNEANELL 469
++ M+ G P+ L+ A ++A EL+
Sbjct: 407 LFERMKEQGLVPNTNTYTTLIDGHCKAGNFSKAYELM 443
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 41/177 (23%), Positives = 80/177 (45%), Gaps = 19/177 (10%)
Query: 23 ADEAGKKNWRRLMNQIEEVGSAVAVLRSERTRGQPLPKDLVLGTLVRLKQLKKWNVVSEV 82
A+EA K NQIE G +L SE+ + + + LV L ++ K ++
Sbjct: 471 AEEAFKLLNTGFQNQIEADGVTYTILISEQCKRADMNQALVF-----LNKMFKVGFQPDI 525
Query: 83 LEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYG 142
+ LI A+ +Q +EK+ + K G AP+ ++T+++ Y
Sbjct: 526 --------------HLYTTLIAAFCRQNMMKDSEKLFDEVIKLGLAPTKETYTSMICGYC 571
Query: 143 RGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSP 199
R + A F++M G P +++Y ++ + ++ EA +++ T++D+ SP
Sbjct: 572 REKKVSLAVKFFQKMSDHGCAPDSISYGALISGLCKESRLDEARQLYDTMIDKGLSP 628
>gi|302768505|ref|XP_002967672.1| hypothetical protein SELMODRAFT_88400 [Selaginella moellendorffii]
gi|300164410|gb|EFJ31019.1| hypothetical protein SELMODRAFT_88400 [Selaginella moellendorffii]
Length = 717
Score = 142 bits (357), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 102/379 (26%), Positives = 177/379 (46%), Gaps = 42/379 (11%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + F ++I Y + +K E++L M P + +L+ A+ G AE+I
Sbjct: 265 NTLTFNVMIKLYARVEKLDKLEQILHTMADADVDPDATTFNSLVAAFVGLGELSLAESIV 324
Query: 155 RRMQSSG----------PR---------PSALTYQIILKLFVEANKFKEAEEVFMTLLDE 195
+ ++ G P+ P TY ++K +V+ N+ +A ++ + + E
Sbjct: 325 QSLRGEGEHQKRVPALLPKLREHSAKFQPDVRTYTTLMKGYVQHNRVSDAMQLLVAMQQE 384
Query: 196 EKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMS----FE-T 250
+ S P++ F I K G ++AR + MA + V + VTYN+L+ F T
Sbjct: 385 KTSAAMPNEVTFTTAIRACAKMGLLDEARVILQEMATQKVAANVVTYNTLLQGVCVFPIT 444
Query: 251 NYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYN 310
+ K +I + M+ AG++ DVVSY LIN Y +A E+ALAVF M +A V + Y
Sbjct: 445 DMKRALEIVEDMKEAGVELDVVSYNTLINGYLEAGDNEQALAVFTRMREAKVPASKVTYG 504
Query: 311 ILLDAFAISGMVDQARTVFKCMRRD-RCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQ 369
L+ AFA SG + VF M D R D+ ++ T++ AY A + A + +K
Sbjct: 505 TLMKAFARSGRTELVVKVFTQMALDPRVRVDVVAWNTLIDAYARAGLEQDATRALEDMKS 564
Query: 370 DGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMR-----------------VNGIKPNQT 412
GF P TY TL+K Y + N +++ ++ ++ V +KP+
Sbjct: 565 RGFSPTNATYNTLVKTYGRSRNFGQLILLWKEINARSVEEDSAAVRDKPLVVGALKPDAA 624
Query: 413 IFTTIMDAYGKNKDFDSAV 431
+ +++D++ + F A+
Sbjct: 625 LLDSLIDSFVRGGYFQLAL 643
Score = 105 bits (263), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 81/356 (22%), Positives = 155/356 (43%), Gaps = 37/356 (10%)
Query: 129 PSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEV 188
P + A + A G + AE ++ M + G + + LT+ +++KL+ K + E++
Sbjct: 229 PDTGAFNAALNACANIGNLERAEQLWELMPAFGVKANTLTFNVMIKLYARVEKLDKLEQI 288
Query: 189 FMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTV-------- 240
T+ D + + PD F+ ++ + G A + + G Q V
Sbjct: 289 LHTMADAD---VDPDATTFNSLVAAFVGLGELSLAESIVQSLRGEGEHQKRVPALLPKLR 345
Query: 241 -----------TYNSLMSFETNYKEVSKIYDQMQ---------RAGLQPDVVSYALLINA 280
TY +LM Y + +++ D MQ + P+ V++ I A
Sbjct: 346 EHSAKFQPDVRTYTTLMK---GYVQHNRVSDAMQLLVAMQQEKTSAAMPNEVTFTTAIRA 402
Query: 281 YGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQART--VFKCMRRDRCS 338
K +EA + +EM V YN LL + + D R + + M+
Sbjct: 403 CAKMGLLDEARVILQEMATQKVAANVVTYNTLLQGVCVFPITDMKRALEIVEDMKEAGVE 462
Query: 339 PDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEI 398
D+ SY T+++ Y+ A D E A F R+++ + +TYGTL+K +A+ E ++++
Sbjct: 463 LDVVSYNTLINGYLEAGDNEQALAVFTRMREAKVPASKVTYGTLMKAFARSGRTELVVKV 522
Query: 399 YDKMRVNG-IKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILL 453
+ +M ++ ++ + + T++DAY + A ++M+S GF P N L+
Sbjct: 523 FTQMALDPRVRVDVVAWNTLIDAYARAGLEQDATRALEDMKSRGFSPTNATYNTLV 578
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 63/263 (23%), Positives = 116/263 (44%), Gaps = 26/263 (9%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYG--RGGRYKNAEA 152
NE+ F I A K G ++A +L M + A +VV++ L++ K A
Sbjct: 392 NEVTFTTAIRACAKMGLLDEARVILQEMATQKVAANVVTYNTLLQGVCVFPITDMKRALE 451
Query: 153 IFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIY 212
I M+ +G ++Y ++ ++EA ++A VF T + E K P + + ++
Sbjct: 452 IVEDMKEAGVELDVVSYNTLINGYLEAGDNEQALAVF-TRMREAKVP--ASKVTYGTLMK 508
Query: 213 MYKKAGGYEKARKLFALMA-ERGVQQSTVTYNSLMSFETNY---KEVSKIYDQMQRAGLQ 268
+ ++G E K+F MA + V+ V +N+L+ ++ ++ + M+ G
Sbjct: 509 AFARSGRTELVVKVFTQMALDPRVRVDVVAWNTLIDAYARAGLEQDATRALEDMKSRGFS 568
Query: 269 PDVVSYALLINAYGKARR----------------EEEALAVFEEMLDAG-VRPTHKAYNI 311
P +Y L+ YG++R EE++ AV ++ L G ++P +
Sbjct: 569 PTNATYNTLVKTYGRSRNFGQLILLWKEINARSVEEDSAAVRDKPLVVGALKPDAALLDS 628
Query: 312 LLDAFAISGMVDQARTVFKCMRR 334
L+D+F G A V CM R
Sbjct: 629 LIDSFVRGGYFQLALQVVDCMDR 651
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/214 (22%), Positives = 91/214 (42%), Gaps = 29/214 (13%)
Query: 225 KLFALMAERGVQQSTVTYNSLMSFETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKA 284
+L A + +G S +M ++VS++ D + LL+ A +
Sbjct: 110 RLVAQLCHQGTAASVSKAQQIMVELRQKRKVSELVD----------CDAMGLLVMASARV 159
Query: 285 RREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFK-------CM----- 332
+L V ML+ G P K ++ ++ + VD A+ K C+
Sbjct: 160 GTAHYSLGVLRTMLELGYHPPVKVWSAVVSKLGKN--VDDAQLALKVFDEVCQCVVEQGM 217
Query: 333 -----RRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYA 387
+ +R PD ++ L+A N ++E AE+ + + G N +T+ +IK YA
Sbjct: 218 IQLHRKMERMKPDTGAFNAALNACANIGNLERAEQLWELMPAFGVKANTLTFNVMIKLYA 277
Query: 388 KVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAY 421
+V L+K+ +I M + P+ T F +++ A+
Sbjct: 278 RVEKLDKLEQILHTMADADVDPDATTFNSLVAAF 311
>gi|356527777|ref|XP_003532484.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g21222-like [Glycine max]
Length = 583
Score = 142 bits (357), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 94/356 (26%), Positives = 172/356 (48%), Gaps = 7/356 (1%)
Query: 130 SVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVF 189
+V + T LM G+ A+A+F + G +P+ +TY ++ +FK +
Sbjct: 21 TVHARTKLMNTLIGKGKPHEAQAVFNNLTEEGHKPTLITYTTLVAALTRQKRFKSIPALL 80
Query: 190 MTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLM--- 246
+ D + +KPD + + MI + ++G ++A K+F M E G + +T TYN+L+
Sbjct: 81 SKVAD---NGMKPDSILLNAMINAFSESGKVDEAMKIFQKMKEYGCKPTTSTYNTLIKGF 137
Query: 247 SFETNYKEVSKIYDQM-QRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPT 305
E K+ + M Q ++P+ +Y +LI A+ ++ EEA V +M+ +G++P
Sbjct: 138 GIAGRPYESMKLLEMMGQDENVKPNDRTYNILIQAWCTKKKLEEAWNVLHKMVASGIQPD 197
Query: 306 HKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFR 365
YN + A+A +G ++A + M + P+ + ++S Y +M A +F
Sbjct: 198 VVTYNTMARAYAQNGETERAERLILKMPYNIVKPNERTCGIIISGYCKEGNMPEALRFLY 257
Query: 366 RLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNK 425
R+K+ G PN + + +LIKGY + + E M GIKP+ F+TIM+A+
Sbjct: 258 RMKELGVDPNPVVFNSLIKGYLDTTDTNGVDEALTLMEEFGIKPDVVTFSTIMNAWSSAG 317
Query: 426 DFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGI 481
++ + +M G PD A +IL A + +A LL + + +P +
Sbjct: 318 LMENCEEIFNDMVKAGIEPDIHAYSILAKGYVRAGQPRKAEALLTSMSKYGVQPNV 373
Score = 134 bits (338), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 105/433 (24%), Positives = 193/433 (44%), Gaps = 30/433 (6%)
Query: 97 MDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRR 156
+ + L+ A +Q F +LS + G P + A++ A+ G+ A IF++
Sbjct: 58 ITYTTLVAALTRQKRFKSIPALLSKVADNGMKPDSILLNAMINAFSESGKVDEAMKIFQK 117
Query: 157 MQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKK 216
M+ G +P+ TY ++K F A + E+ ++ + +E +KP+ + ++++I +
Sbjct: 118 MKEYGCKPTTSTYNTLIKGFGIAGRPYESMKLLEMMGQDEN--VKPNDRTYNILIQAWCT 175
Query: 217 AGGYEKARKLFALMAERGVQQSTVTYNSLM-SFETN--YKEVSKIYDQMQRAGLQPDVVS 273
E+A + M G+Q VTYN++ ++ N + ++ +M ++P+ +
Sbjct: 176 KKKLEEAWNVLHKMVASGIQPDVVTYNTMARAYAQNGETERAERLILKMPYNIVKPNERT 235
Query: 274 YALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNIL----LDAFAISGMVDQARTVF 329
++I+ Y K EAL M + GV P +N L LD +G VD+A T+
Sbjct: 236 CGIIISGYCKEGNMPEALRFLYRMKELGVDPNPVVFNSLIKGYLDTTDTNG-VDEALTL- 293
Query: 330 KCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKV 389
M PD+ +++T+++A+ +A ME E+ F + + G P++ Y L KGY +
Sbjct: 294 --MEEFGIKPDVVTFSTIMNAWSSAGLMENCEEIFNDMVKAGIEPDIHAYSILAKGYVRA 351
Query: 390 NNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAK 449
K + M G++PN IFTTI+ + D A ++M G P+ K
Sbjct: 352 GQPRKAEALLTSMSKYGVQPNVVIFTTIISGWCAAGKMDRAFRLCEKMHEMGTSPNLKTY 411
Query: 450 NILLSLAKTADERNEANELLGNFNHPNNEPGINGLSISVD-----------------EED 492
L+ A + +A ELL P ++ + + D E+
Sbjct: 412 ETLIWGYGEAKQPWKAEELLTTMEERGVVPEMSTMQLVADAWRAIGLFKEANRILNGSEE 471
Query: 493 DDDDDDEDDDDNI 505
+ + D E D D I
Sbjct: 472 ESELDQEFDSDKI 484
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 83/330 (25%), Positives = 146/330 (44%), Gaps = 41/330 (12%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N+ + +LI A+ + +A VL M G P VV++ + AY + G + AE +
Sbjct: 162 NDRTYNILIQAWCTKKKLEEAWNVLHKMVASGIQPDVVTYNTMARAYAQNGETERAERLI 221
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
+M Y I+ KP+++ ++I Y
Sbjct: 222 LKMP----------YNIV----------------------------KPNERTCGIIISGY 243
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSLMSF---ETNYKEVSKIYDQMQRAGLQPDV 271
K G +A + M E GV + V +NSL+ T+ V + M+ G++PDV
Sbjct: 244 CKEGNMPEALRFLYRMKELGVDPNPVVFNSLIKGYLDTTDTNGVDEALTLMEEFGIKPDV 303
Query: 272 VSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKC 331
V+++ ++NA+ A E +F +M+ AG+ P AY+IL + +G +A +
Sbjct: 304 VTFSTIMNAWSSAGLMENCEEIFNDMVKAGIEPDIHAYSILAKGYVRAGQPRKAEALLTS 363
Query: 332 MRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNN 391
M + P++ +TT++S + A M+ A + ++ + G PN+ TY TLI GY +
Sbjct: 364 MSKYGVQPNVVIFTTIISGWCAAGKMDRAFRLCEKMHEMGTSPNLKTYETLIWGYGEAKQ 423
Query: 392 LEKMMEIYDKMRVNGIKPNQTIFTTIMDAY 421
K E+ M G+ P + + DA+
Sbjct: 424 PWKAEELLTTMEERGVVPEMSTMQLVADAW 453
Score = 79.0 bits (193), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 57/237 (24%), Positives = 102/237 (43%), Gaps = 35/237 (14%)
Query: 93 DFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEA 152
D N + F LI Y D N ++ L+ M + G P VV+ + +M A+ G +N E
Sbjct: 265 DPNPVVFNSLIKGYLDTTDTNGVDEALTLMEEFGIKPDVVTFSTIMNAWSSAGLMENCEE 324
Query: 153 IFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIY 212
IF M +G P Y I+ K +V A + ++AE + ++ K ++P+ +F +I
Sbjct: 325 IFNDMVKAGIEPDIHAYSILAKGYVRAGQPRKAEALLTSM---SKYGVQPNVVIFTTIIS 381
Query: 213 MYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSKIYDQMQRAGLQPDVV 272
+ AG ++A +L ++M G P++
Sbjct: 382 GWCAAGKMDRAFRLC--------------------------------EKMHEMGTSPNLK 409
Query: 273 SYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVF 329
+Y LI YG+A++ +A + M + GV P ++ DA+ G+ +A +
Sbjct: 410 TYETLIWGYGEAKQPWKAEELLTTMEERGVVPEMSTMQLVADAWRAIGLFKEANRIL 466
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/138 (21%), Positives = 64/138 (46%)
Query: 332 MRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNN 391
+R + + + T +++ + A+ F L ++G P +ITY TL+ +
Sbjct: 13 LRGNNSCQTVHARTKLMNTLIGKGKPHEAQAVFNNLTEEGHKPTLITYTTLVAALTRQKR 72
Query: 392 LEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNI 451
+ + + K+ NG+KP+ + +++A+ ++ D A+ +++M+ G P N
Sbjct: 73 FKSIPALLSKVADNGMKPDSILLNAMINAFSESGKVDEAMKIFQKMKEYGCKPTTSTYNT 132
Query: 452 LLSLAKTADERNEANELL 469
L+ A E+ +LL
Sbjct: 133 LIKGFGIAGRPYESMKLL 150
>gi|224054827|ref|XP_002298371.1| predicted protein [Populus trichocarpa]
gi|222845629|gb|EEE83176.1| predicted protein [Populus trichocarpa]
Length = 915
Score = 142 bits (357), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 105/439 (23%), Positives = 190/439 (43%), Gaps = 75/439 (17%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
LI + K G+ + A M KG P+VVS+T+L+ Y G+ A ++ M G
Sbjct: 442 LINGHCKLGNLSAAVSFFDEMIDKGLKPTVVSYTSLISGYCNKGKLHEAFRLYHEMTGKG 501
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
P+ T+ ++ AN+ +A +F +L++ + P++ +++MI + K G
Sbjct: 502 IAPNTYTFTTLISALFRANRMTDAFRLFDEMLEQN---MMPNEVTYNVMIEGHCKEGNTV 558
Query: 222 KARKLFALMAERGVQQSTVTYNSLMSFETNYKEVS---KIYDQMQRAGLQPDVVSYALLI 278
KA +L M ++G+ T TY L+S + V K D + R + + + Y+ L+
Sbjct: 559 KAFELLNQMVQKGLVPDTYTYRPLISSLCSTGRVCEAKKFIDDLHREHFKLNEMCYSALL 618
Query: 279 NAYGKARREEEALAVFEEMLDAGV-----------------------------------R 303
+ Y K R +AL V EM+ GV R
Sbjct: 619 HGYCKEGRLRDALGVCREMVKRGVDMDLVCYAVLIDGTIKEQDTSAVFGLLKNMHDQRLR 678
Query: 304 PTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKF 363
P Y ++D ++ +G V +A ++ M + C+P+I +YTT+++ A M+ AE
Sbjct: 679 PDKVIYTSMIDGYSKAGSVKKAFGIWDIMIDEGCTPNIVTYTTLINELCKAGLMDKAELL 738
Query: 364 FR-------------------------------RLKQD---GFVPNVITYGTLIKGYAKV 389
++ +L D G + N ++Y L++G+ K+
Sbjct: 739 WKEMLVSNSTPNHVTYCCFLDHLAREGSMEKAVQLHNDMLKGLLANTVSYNILVRGFCKL 798
Query: 390 NNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAK 449
+E+ ++ D+M N I P+ ++TI+ + + D A+ ++ M + G PD A
Sbjct: 799 GRVEEATKLLDEMIDNAIFPDCITYSTIIYQCCRRGNLDGAIEFWDTMLNKGLKPDTLAY 858
Query: 450 NILLSLAKTADERNEANEL 468
N L+ A E +A EL
Sbjct: 859 NFLIYGCCIAGELGKAFEL 877
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 81/348 (23%), Positives = 159/348 (45%), Gaps = 6/348 (1%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
L+ ++G A +++ + K G PS+ + AL+ + + G++ AE +F+ M G
Sbjct: 337 LVEGLRRKGKVVDAFDLVNRVKKVGAMPSLFVYNALINSLCKDGKFDEAELLFKEMGEKG 396
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
+ +TY I++ F K A ++ + +K ++ +I + K G
Sbjct: 397 LCANDVTYSILIDSFCRRGKLDTAIHFLGKMI---MAGIKITVYPYNSLINGHCKLGNLS 453
Query: 222 KARKLFALMAERGVQQSTVTYNSLMSFETN---YKEVSKIYDQMQRAGLQPDVVSYALLI 278
A F M ++G++ + V+Y SL+S N E ++Y +M G+ P+ ++ LI
Sbjct: 454 AAVSFFDEMIDKGLKPTVVSYTSLISGYCNKGKLHEAFRLYHEMTGKGIAPNTYTFTTLI 513
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCS 338
+A +A R +A +F+EML+ + P YN++++ G +A + M +
Sbjct: 514 SALFRANRMTDAFRLFDEMLEQNMMPNEVTYNVMIEGHCKEGNTVKAFELLNQMVQKGLV 573
Query: 339 PDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEI 398
PD +Y ++S+ + + A+KF L ++ F N + Y L+ GY K L + +
Sbjct: 574 PDTYTYRPLISSLCSTGRVCEAKKFIDDLHREHFKLNEMCYSALLHGYCKEGRLRDALGV 633
Query: 399 YDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQ 446
+M G+ + + ++D K +D + K M PD+
Sbjct: 634 CREMVKRGVDMDLVCYAVLIDGTIKEQDTSAVFGLLKNMHDQRLRPDK 681
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 80/330 (24%), Positives = 161/330 (48%), Gaps = 9/330 (2%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
LI++ G +A+K + ++++ + + + ++AL+ Y + GR ++A + R M G
Sbjct: 582 LISSLCSTGRVCEAKKFIDDLHREHFKLNEMCYSALLHGYCKEGRLRDALGVCREMVKRG 641
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
+ Y +++ + K ++ VF L + L+PD+ ++ MI Y KAG +
Sbjct: 642 VDMDLVCYAVLIDGTI---KEQDTSAVFGLLKNMHDQRLRPDKVIYTSMIDGYSKAGSVK 698
Query: 222 KARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSK---IYDQMQRAGLQPDVVSYALLI 278
KA ++ +M + G + VTY +L++ + K ++ +M + P+ V+Y +
Sbjct: 699 KAFGIWDIMIDEGCTPNIVTYTTLINELCKAGLMDKAELLWKEMLVSNSTPNHVTYCCFL 758
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCS 338
+ + E+A+ + +ML G+ +YNIL+ F G V++A + M +
Sbjct: 759 DHLAREGSMEKAVQLHNDMLK-GLLANTVSYNILVRGFCKLGRVEEATKLLDEMIDNAIF 817
Query: 339 PDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEI 398
PD +Y+T++ +++GA +F+ + G P+ + Y LI G L K E+
Sbjct: 818 PDCITYSTIIYQCCRRGNLDGAIEFWDTMLNKGLKPDTLAYNFLIYGCCIAGELGKAFEL 877
Query: 399 YDKMRVNGIKPNQTIFTTIMDAYGKNKDFD 428
D M G+KPNQ ++ ++G ++ F
Sbjct: 878 RDDMIRRGVKPNQATHKSL--SHGASRKFS 905
Score = 116 bits (290), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 85/369 (23%), Positives = 155/369 (42%), Gaps = 6/369 (1%)
Query: 88 IQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRY 147
IQ +E+ + L+ K +F V+ M + G+ P+ + ++L+E R G+
Sbjct: 288 IQKGLTASEVTYCTLVLGLCKVQEFEVGAGVMDEMIELGFVPTEAALSSLVEGLRRKGKV 347
Query: 148 KNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMF 207
+A + R++ G PS Y ++ + KF EAE +F + EK L + +
Sbjct: 348 VDAFDLVNRVKKVGAMPSLFVYNALINSLCKDGKFDEAELLFKEM--GEKG-LCANDVTY 404
Query: 208 HMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFET---NYKEVSKIYDQMQR 264
++I + + G + A M G++ + YNSL++ N +D+M
Sbjct: 405 SILIDSFCRRGKLDTAIHFLGKMIMAGIKITVYPYNSLINGHCKLGNLSAAVSFFDEMID 464
Query: 265 AGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQ 324
GL+P VVSY LI+ Y + EA ++ EM G+ P + L+ A + +
Sbjct: 465 KGLKPTVVSYTSLISGYCNKGKLHEAFRLYHEMTGKGIAPNTYTFTTLISALFRANRMTD 524
Query: 325 ARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIK 384
A +F M P+ +Y M+ + + A + ++ Q G VP+ TY LI
Sbjct: 525 AFRLFDEMLEQNMMPNEVTYNVMIEGHCKEGNTVKAFELLNQMVQKGLVPDTYTYRPLIS 584
Query: 385 GYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPP 444
+ + + D + K N+ ++ ++ Y K A+ +EM G
Sbjct: 585 SLCSTGRVCEAKKFIDDLHREHFKLNEMCYSALLHGYCKEGRLRDALGVCREMVKRGVDM 644
Query: 445 DQKAKNILL 453
D +L+
Sbjct: 645 DLVCYAVLI 653
Score = 105 bits (262), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 85/392 (21%), Positives = 169/392 (43%), Gaps = 11/392 (2%)
Query: 93 DF-NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAE 151
DF + + F +LI +Y ++ + + M + P V + ++ + R
Sbjct: 154 DFISSLGFDLLIQSYVQEKRMFDSVLIFRLMRQCELMPQVRTLGEVLNGLAKIRRVDMVL 213
Query: 152 AIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMI 211
+F + S G RP Y +++ F E F +A+E+ + E S L + +++++I
Sbjct: 214 VLFGEILSMGIRPDIYIYVAVIRSFCELKNFAKAKEMIQRM---ESSDL--NVVVYNVLI 268
Query: 212 YMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEV---SKIYDQMQRAGLQ 268
+ K +A ++ + ++G+ S VTY +L+ +E + + D+M G
Sbjct: 269 HGLCKNKRVWEAVEIKNGLIQKGLTASEVTYCTLVLGLCKVQEFEVGAGVMDEMIELGFV 328
Query: 269 PDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTV 328
P + + L+ + + +A + + G P+ YN L+++ G D+A +
Sbjct: 329 PTEAALSSLVEGLRRKGKVVDAFDLVNRVKKVGAMPSLFVYNALINSLCKDGKFDEAELL 388
Query: 329 FKCM-RRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYA 387
FK M + C+ D+ +Y+ ++ ++ ++ A F ++ G V Y +LI G+
Sbjct: 389 FKEMGEKGLCANDV-TYSILIDSFCRRGKLDTAIHFLGKMIMAGIKITVYPYNSLINGHC 447
Query: 388 KVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQK 447
K+ NL + +D+M G+KP +T+++ Y A Y EM G P+
Sbjct: 448 KLGNLSAAVSFFDEMIDKGLKPTVVSYTSLISGYCNKGKLHEAFRLYHEMTGKGIAPNTY 507
Query: 448 AKNILLSLAKTADERNEANELLGNFNHPNNEP 479
L+S A+ +A L N P
Sbjct: 508 TFTTLISALFRANRMTDAFRLFDEMLEQNMMP 539
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 79/379 (20%), Positives = 165/379 (43%), Gaps = 10/379 (2%)
Query: 99 FLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQ 158
++ +I ++ + +F KA++++ M +VV + L+ + R A I +
Sbjct: 231 YVAVIRSFCELKNFAKAKEMIQRMESSDL--NVVVYNVLIHGLCKNKRVWEAVEIKNGLI 288
Query: 159 SSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEE-KSPLKPDQKMFHMMIYMYKKA 217
G S +TY ++ + +F EV ++DE + P + ++ ++
Sbjct: 289 QKGLTASEVTYCTLVLGLCKVQEF----EVGAGVMDEMIELGFVPTEAALSSLVEGLRRK 344
Query: 218 GGYEKARKLFALMAERGVQQSTVTYNSL---MSFETNYKEVSKIYDQMQRAGLQPDVVSY 274
G A L + + G S YN+L + + + E ++ +M GL + V+Y
Sbjct: 345 GKVVDAFDLVNRVKKVGAMPSLFVYNALINSLCKDGKFDEAELLFKEMGEKGLCANDVTY 404
Query: 275 ALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRR 334
++LI+++ + + + A+ +M+ AG++ T YN L++ G + A + F M
Sbjct: 405 SILIDSFCRRGKLDTAIHFLGKMIMAGIKITVYPYNSLINGHCKLGNLSAAVSFFDEMID 464
Query: 335 DRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEK 394
P + SYT+++S Y N + A + + + G PN T+ TLI + N +
Sbjct: 465 KGLKPTVVSYTSLISGYCNKGKLHEAFRLYHEMTGKGIAPNTYTFTTLISALFRANRMTD 524
Query: 395 MMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLS 454
++D+M + PN+ + +++ + K + A +M G PD L+S
Sbjct: 525 AFRLFDEMLEQNMMPNEVTYNVMIEGHCKEGNTVKAFELLNQMVQKGLVPDTYTYRPLIS 584
Query: 455 LAKTADERNEANELLGNFN 473
+ EA + + + +
Sbjct: 585 SLCSTGRVCEAKKFIDDLH 603
>gi|224131362|ref|XP_002328520.1| predicted protein [Populus trichocarpa]
gi|222838235|gb|EEE76600.1| predicted protein [Populus trichocarpa]
Length = 501
Score = 142 bits (357), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 88/355 (24%), Positives = 170/355 (47%), Gaps = 6/355 (1%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
+ + K+ ++ + + M+ G A + + L+ + R A ++ +M G
Sbjct: 92 FLGSIAKKKQYSTVVSLCNQMDLFGVAHNDYTLNILINSLCRLSHIHFAVSVLSKMFKLG 151
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
+P ++T+ ++ + KEA E+F + + P+ F +++ + K G
Sbjct: 152 IQPDSVTFTTLINGLCNEGRIKEAVELFNEMAGRDA---MPNTVTFTILVDVLCKKGMVS 208
Query: 222 KARKLFALMAERGVQQSTVTYNSLM---SFETNYKEVSKIYDQMQRAGLQPDVVSYALLI 278
+AR +F M E+GV+ + TYN+LM + SK+++ M G P V SY++LI
Sbjct: 209 EARCVFETMTEKGVEPNIYTYNALMNGYCLRLEMNDASKVFEIMVGKGCAPSVHSYSILI 268
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCS 338
N Y K+RR +EA A+ +M + + P YN L+ + + +A+ +FK M
Sbjct: 269 NGYCKSRRIDEAKALLTQMSEKELIPNTVTYNTLMQGLCHASSLLEAQELFKKMCSSGML 328
Query: 339 PDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEI 398
P++ +Y+ +L +E A K +++ P+++ Y LI+G LE E+
Sbjct: 329 PNLRTYSILLDGLCKHGHLEEALKLLTSMQERKLEPDIVLYNILIQGMFIAGKLEVAKEL 388
Query: 399 YDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILL 453
+ K+ NGI+P+ + ++ K D A +++ME GF PD + N+++
Sbjct: 389 FSKLFANGIRPSVRTYNIMIKGLLKEGLSDEAYKLFRKMEDDGFLPDSCSYNVII 443
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 83/350 (23%), Positives = 161/350 (46%), Gaps = 20/350 (5%)
Query: 149 NAEAIFRRMQSSGPRPSALTYQIILKLFVEANKF------KEAEEVFMTLLDE-EKSPLK 201
+A A F RM PRPS FVE KF K+ ++L ++ + +
Sbjct: 69 DAMASFYRMIHMNPRPS----------FVELGKFLGSIAKKKQYSTVVSLCNQMDLFGVA 118
Query: 202 PDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETN---YKEVSKI 258
+ +++I + A + + M + G+Q +VT+ +L++ N KE ++
Sbjct: 119 HNDYTLNILINSLCRLSHIHFAVSVLSKMFKLGIQPDSVTFTTLINGLCNEGRIKEAVEL 178
Query: 259 YDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAI 318
+++M P+ V++ +L++ K EA VFE M + GV P YN L++ + +
Sbjct: 179 FNEMAGRDAMPNTVTFTILVDVLCKKGMVSEARCVFETMTEKGVEPNIYTYNALMNGYCL 238
Query: 319 SGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVIT 378
++ A VF+ M C+P + SY+ +++ Y + ++ A+ ++ + +PN +T
Sbjct: 239 RLEMNDASKVFEIMVGKGCAPSVHSYSILINGYCKSRRIDEAKALLTQMSEKELIPNTVT 298
Query: 379 YGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEME 438
Y TL++G ++L + E++ KM +G+ PN ++ ++D K+ + A+ M+
Sbjct: 299 YNTLMQGLCHASSLLEAQELFKKMCSSGMLPNLRTYSILLDGLCKHGHLEEALKLLTSMQ 358
Query: 439 SCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGINGLSISV 488
PD NIL+ A + A EL P + +I +
Sbjct: 359 ERKLEPDIVLYNILIQGMFIAGKLEVAKELFSKLFANGIRPSVRTYNIMI 408
>gi|50878351|gb|AAT85126.1| hypothetical protein [Oryza sativa Japonica Group]
Length = 920
Score = 142 bits (357), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 92/414 (22%), Positives = 194/414 (46%), Gaps = 7/414 (1%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKG-YAPSVVSHTALMEAYGRGGRYKNAEAI 153
N + + +L+ Y K G +AE+V+ M + G V++ ++ Y + GR +A +
Sbjct: 287 NVVTYTLLVKGYCKDGRMEEAERVVKEMKETGDIVVDEVAYGMMINGYCQRGRMDDATRV 346
Query: 154 FRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYM 213
M+ +G + Y ++ + + +E ++V L + E ++PD+ ++ +I
Sbjct: 347 RNEMRDAGIHVNLFVYNTMINGLCKLGRMEEVQKV---LQEMEDVGMRPDKYSYNTLIDG 403
Query: 214 YKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVS---KIYDQMQRAGLQPD 270
Y + G KA ++ +M G+ +T+TYN+L+ + + +++ M + G+ P+
Sbjct: 404 YCREGSMRKAFEMCRMMVRNGLAATTLTYNTLLKGFCSLHAIDDALRLWFLMLKRGVAPN 463
Query: 271 VVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFK 330
+S + L++ KA + E+AL +++E L G+ +N +++ G + +A +
Sbjct: 464 EISCSTLLDGLFKAGKTEQALNLWKETLARGLAKNVITFNTVINGLCKIGRMAEAEELLD 523
Query: 331 CMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVN 390
M+ RC PD +Y T+ Y + A +++ GF P+V + + I G+
Sbjct: 524 RMKELRCPPDSLTYRTLFDGYCKLGQLGTATHLMNKMEHLGFAPSVEMFNSFITGHFIAK 583
Query: 391 NLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKN 450
K+ +I+ +M G+ PN + ++ + K + A Y EM + G P+ +
Sbjct: 584 QWHKVNDIHSEMSARGLSPNLVTYGALIAGWCKEGNLHEACNLYFEMVNNGMNPNVFICS 643
Query: 451 ILLSLAKTADERNEANELLGNFNHPNNEPGINGLSISVDEEDDDDDDDEDDDDN 504
L+S + +EAN +L + + PG + +I +D+ D D + +
Sbjct: 644 ALMSCFYKEGKVDEANLVLQKLVNIDMIPGCSISTIEIDKISHVVDTIADGNPH 697
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 93/377 (24%), Positives = 177/377 (46%), Gaps = 5/377 (1%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
+E ++ AY + G +A + + M G ++V++ A+M+ Y G ++A I
Sbjct: 217 DEFTVAIMAKAYCRDGRVAQAVEFVEEMEGMGLEVNLVAYHAVMDCYCGMGWTEDARRIL 276
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
+Q G P+ +TY +++K + + + +EAE V + +E + D+ + MMI Y
Sbjct: 277 ESLQRKGLSPNVVTYTLLVKGYCKDGRMEEAERVVKEM--KETGDIVVDEVAYGMMINGY 334
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNY---KEVSKIYDQMQRAGLQPDV 271
+ G + A ++ M + G+ + YN++++ +EV K+ +M+ G++PD
Sbjct: 335 CQRGRMDDATRVRNEMRDAGIHVNLFVYNTMINGLCKLGRMEEVQKVLQEMEDVGMRPDK 394
Query: 272 VSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKC 331
SY LI+ Y + +A + M+ G+ T YN LL F +D A ++
Sbjct: 395 YSYNTLIDGYCREGSMRKAFEMCRMMVRNGLAATTLTYNTLLKGFCSLHAIDDALRLWFL 454
Query: 332 MRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNN 391
M + +P+ S +T+L A E A ++ G NVIT+ T+I G K+
Sbjct: 455 MLKRGVAPNEISCSTLLDGLFKAGKTEQALNLWKETLARGLAKNVITFNTVINGLCKIGR 514
Query: 392 LEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNI 451
+ + E+ D+M+ P+ + T+ D Y K +A +ME GF P + N
Sbjct: 515 MAEAEELLDRMKELRCPPDSLTYRTLFDGYCKLGQLGTATHLMNKMEHLGFAPSVEMFNS 574
Query: 452 LLSLAKTADERNEANEL 468
++ A + ++ N++
Sbjct: 575 FITGHFIAKQWHKVNDI 591
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 92/382 (24%), Positives = 175/382 (45%), Gaps = 7/382 (1%)
Query: 92 WDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAE 151
+ F+ + F +L+ A+ G + A V M K G PS+ S L+ + G A
Sbjct: 144 FTFSAVSFDLLLRAHADAGQLSSALNVFDGMGKVGCRPSLRSCNRLLNKLVQSGDPGMAA 203
Query: 152 AIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMI 211
++ +M+ +G P T I+ K + + +A E + E L+ + +H ++
Sbjct: 204 MVYGQMRIAGVLPDEFTVAIMAKAYCRDGRVAQAVEFVEEM---EGMGLEVNLVAYHAVM 260
Query: 212 YMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLM---SFETNYKEVSKIYDQMQRAG-L 267
Y G E AR++ + +G+ + VTY L+ + +E ++ +M+ G +
Sbjct: 261 DCYCGMGWTEDARRILESLQRKGLSPNVVTYTLLVKGYCKDGRMEEAERVVKEMKETGDI 320
Query: 268 QPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQART 327
D V+Y ++IN Y + R ++A V EM DAG+ YN +++ G +++ +
Sbjct: 321 VVDEVAYGMMINGYCQRGRMDDATRVRNEMRDAGIHVNLFVYNTMINGLCKLGRMEEVQK 380
Query: 328 VFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYA 387
V + M PD SY T++ Y M A + R + ++G +TY TL+KG+
Sbjct: 381 VLQEMEDVGMRPDKYSYNTLIDGYCREGSMRKAFEMCRMMVRNGLAATTLTYNTLLKGFC 440
Query: 388 KVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQK 447
++ ++ + ++ M G+ PN+ +T++D K + A+ +KE + G +
Sbjct: 441 SLHAIDDALRLWFLMLKRGVAPNEISCSTLLDGLFKAGKTEQALNLWKETLARGLAKNVI 500
Query: 448 AKNILLSLAKTADERNEANELL 469
N +++ EA ELL
Sbjct: 501 TFNTVINGLCKIGRMAEAEELL 522
Score = 118 bits (296), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 81/358 (22%), Positives = 161/358 (44%), Gaps = 32/358 (8%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
NE+ L+ K G +A + +G A +V++ ++ + GR AE +
Sbjct: 463 NEISCSTLLDGLFKAGKTEQALNLWKETLARGLAKNVITFNTVINGLCKIGRMAEAEELL 522
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
RM+ P +LTY+ + + + + A + + E P +MF+ I +
Sbjct: 523 DRMKELRCPPDSLTYRTLFDGYCKLGQLGTATHLMNKM---EHLGFAPSVEMFNSFITGH 579
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSLMSF---ETNYKEVSKIYDQMQRAGLQPDV 271
A + K + + M+ RG+ + VTY +L++ E N E +Y +M G+ P+V
Sbjct: 580 FIAKQWHKVNDIHSEMSARGLSPNLVTYGALIAGWCKEGNLHEACNLYFEMVNNGMNPNV 639
Query: 272 VSYALLINAYGKARREEEALAVFEEMLDAGVRP-----------------------THKA 308
+ L++ + K + +EA V +++++ + P H A
Sbjct: 640 FICSALMSCFYKEGKVDEANLVLQKLVNIDMIPGCSISTIEIDKISHVVDTIADGNPHSA 699
Query: 309 ---YNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFR 365
+N+++ SG + A+++F+ +R R PD +Y++++ + ++ A
Sbjct: 700 NVMWNVIIFGLCKSGRIADAKSLFESLRNKRFLPDNFTYSSLIHGCAASGSIDEAFSLRD 759
Query: 366 RLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGK 423
+ G PN+ITY +LI G K L + + +++K++ GI PN + T++D Y K
Sbjct: 760 VMLSAGLTPNIITYNSLIYGLCKSGKLSRAVNLFNKLQSKGISPNGITYNTLIDEYCK 817
Score = 115 bits (289), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 82/329 (24%), Positives = 148/329 (44%), Gaps = 29/329 (8%)
Query: 129 PSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEV 188
PS+VSH L+ R R+ +A A+ + S P L F EV
Sbjct: 98 PSLVSHAQLLHILARARRFHDARAL---LSSLPPHAEPL--------------FPHLAEV 140
Query: 189 FMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSF 248
+ S F +++ + AG A +F M + G + S + N L++
Sbjct: 141 YRDFTFSAVS--------FDLLLRAHADAGQLSSALNVFDGMGKVGCRPSLRSCNRLLNK 192
Query: 249 ETNYKE---VSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPT 305
+ + +Y QM+ AG+ PD + A++ AY + R +A+ EEM G+
Sbjct: 193 LVQSGDPGMAAMVYGQMRIAGVLPDEFTVAIMAKAYCRDGRVAQAVEFVEEMEGMGLEVN 252
Query: 306 HKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFR 365
AY+ ++D + G + AR + + ++R SP++ +YT ++ Y ME AE+ +
Sbjct: 253 LVAYHAVMDCYCGMGWTEDARRILESLQRKGLSPNVVTYTLLVKGYCKDGRMEEAERVVK 312
Query: 366 RLKQDG-FVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKN 424
+K+ G V + + YG +I GY + ++ + ++MR GI N ++ T+++ K
Sbjct: 313 EMKETGDIVVDEVAYGMMINGYCQRGRMDDATRVRNEMRDAGIHVNLFVYNTMINGLCKL 372
Query: 425 KDFDSAVVWYKEMESCGFPPDQKAKNILL 453
+ +EME G PD+ + N L+
Sbjct: 373 GRMEEVQKVLQEMEDVGMRPDKYSYNTLI 401
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 74/334 (22%), Positives = 150/334 (44%), Gaps = 31/334 (9%)
Query: 99 FLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQ 158
F IT + ++K + S M+ +G +P++V++ AL+ + + G A ++ M
Sbjct: 572 FNSFITGHFIAKQWHKVNDIHSEMSARGLSPNLVTYGALIAGWCKEGNLHEACNLYFEMV 631
Query: 159 SSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAG 218
++G P+ ++ F + K EA V L++ + + P + + I
Sbjct: 632 NNGMNPNVFICSALMSCFYKEGKVDEANLVLQKLVNID---MIPGCSISTIEI------- 681
Query: 219 GYEKARKLFALMAERGVQQSTVTYNSL---MSFETNYKEVSKIYDQMQRAGLQPDVVSYA 275
+K + +A+ + V +N + + + +++ ++ PD +Y+
Sbjct: 682 --DKISHVVDTIADGNPHSANVMWNVIIFGLCKSGRIADAKSLFESLRNKRFLPDNFTYS 739
Query: 276 LLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRD 335
LI+ + +EA ++ + ML AG+ P YN L+ SG + +A +F ++
Sbjct: 740 SLIHGCAASGSIDEAFSLRDVMLSAGLTPNIITYNSLIYGLCKSGKLSRAVNLFNKLQSK 799
Query: 336 RCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFV----------------PNVITY 379
SP+ +Y T++ Y A K +++ ++G++ PN ITY
Sbjct: 800 GISPNGITYNTLIDEYCKEGKTTEAFKLKQKMVEEGYMEEAIKLLDQMIENNVDPNYITY 859
Query: 380 GTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTI 413
TLI GY K N+E++ ++YD+M + G+ P I
Sbjct: 860 CTLIHGYIKSGNMEEISKLYDEMHIRGLLPTNWI 893
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 77/372 (20%), Positives = 160/372 (43%), Gaps = 25/372 (6%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
+ + + L Y K G A +++ M G+APSV + + + ++ I
Sbjct: 533 DSLTYRTLFDGYCKLGQLGTATHLMNKMEHLGFAPSVEMFNSFITGHFIAKQWHKVNDIH 592
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
M + G P+ +TY ++ + + EA ++ +++ + + P+ + ++ +
Sbjct: 593 SEMSARGLSPNLVTYGALIAGWCKEGNLHEACNLYFEMVN---NGMNPNVFICSALMSCF 649
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSKIYDQMQRAGLQPDVVSY 274
K G ++A L+ ++ V + S+ + E + ++S + D + V +
Sbjct: 650 YKEGKVDEAN----LVLQKLVNIDMIPGCSISTIEID--KISHVVDTIADGNPHSANVMW 703
Query: 275 ALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRR 334
++I K+ R +A ++FE + + P + Y+ L+ A SG +D+A ++ M
Sbjct: 704 NVIIFGLCKSGRIADAKSLFESLRNKRFLPDNFTYSSLIHGCAASGSIDEAFSLRDVMLS 763
Query: 335 DRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNN--- 391
+P+I +Y +++ + + A F +L+ G PN ITY TLI Y K
Sbjct: 764 AGLTPNIITYNSLIYGLCKSGKLSRAVNLFNKLQSKGISPNGITYNTLIDEYCKEGKTTE 823
Query: 392 -------------LEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEME 438
+E+ +++ D+M N + PN + T++ Y K+ + + Y EM
Sbjct: 824 AFKLKQKMVEEGYMEEAIKLLDQMIENNVDPNYITYCTLIHGYIKSGNMEEISKLYDEMH 883
Query: 439 SCGFPPDQKAKN 450
G P N
Sbjct: 884 IRGLLPTNWIGN 895
>gi|297746072|emb|CBI16128.3| unnamed protein product [Vitis vinifera]
Length = 563
Score = 142 bits (357), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 104/410 (25%), Positives = 195/410 (47%), Gaps = 23/410 (5%)
Query: 89 QSWWDFNEM---------DFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALME 139
++W FNE F ++I + G +K +VL M + G +P+VV +T L++
Sbjct: 148 KAWRVFNETKGNVKLDVYSFGIMIKGCCEVGYLDKGFEVLGQMEEMGLSPNVVVYTTLID 207
Query: 140 AYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSP 199
+ G + + +F +M + TY +++ F + K+ E++ + + +
Sbjct: 208 GCCKNGDIERGKQLFYKMGELDVVANQYTYTVLINGFFKMGLKKDGIELYEKM---KLTG 264
Query: 200 LKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSL---MSFETNYKEVS 256
+ P+ ++ MI G A +LF M ERGV + VTYN+L + E E
Sbjct: 265 IVPNVYTYNSMICRCCNDGKLNNAFELFDEMRERGVACNVVTYNTLIGGLCQERRVLEAE 324
Query: 257 KIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAF 316
++ +M+R GL P+++SY LI+ Y ++A ++F +M +G P+ YNIL+ F
Sbjct: 325 RLMCRMKRDGLSPNLISYNTLIDGYCSIGNLDKASSLFNQMKSSGQSPSLATYNILIAGF 384
Query: 317 A----ISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGF 372
+ +G+ D R M SP +YT ++ A V + ++E A + + +++ G
Sbjct: 385 SEAKNSAGVTDMVRE----MEARGLSPSKVTYTILMDALVRSDNIEKAFQIYSSMEKAGL 440
Query: 373 VPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVV 432
V ++ YG LI G V ++++ +++ + +KPN I+ T++ Y K A+
Sbjct: 441 VADIYIYGVLIHGLCVVGDMKEASKLFKSLDEMHLKPNDVIYNTMIYGYCKEGSSYRALR 500
Query: 433 WYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGIN 482
KEM G P+ + N + + ++ EA LL + +P I+
Sbjct: 501 LLKEMGENGMVPNVASYNSTIQILCKDEKWTEAEVLLKDMIELGLKPSIS 550
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 96/391 (24%), Positives = 177/391 (45%), Gaps = 42/391 (10%)
Query: 127 YAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAE 186
+ V+ H A++ A+ R + A F +M G P + T+ +L L +++N F++A
Sbjct: 91 FPTHVLIHEAIINAHVRSQLPEQALFYFNQMIGRGLVPGSNTFNNLLILLIKSNFFEKAW 150
Query: 187 EVFMTLLDEEKSPLKPDQKMFHMMI-------YMYK------------------------ 215
VF +E K +K D F +MI Y+ K
Sbjct: 151 RVF----NETKGNVKLDVYSFGIMIKGCCEVGYLDKGFEVLGQMEEMGLSPNVVVYTTLI 206
Query: 216 ----KAGGYEKARKLFALMAERGVQQSTVTYNSLMS--FETNYKEVS-KIYDQMQRAGLQ 268
K G E+ ++LF M E V + TY L++ F+ K+ ++Y++M+ G+
Sbjct: 207 DGCCKNGDIERGKQLFYKMGELDVVANQYTYTVLINGFFKMGLKKDGIELYEKMKLTGIV 266
Query: 269 PDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTV 328
P+V +Y +I + A +F+EM + GV YN L+ V +A +
Sbjct: 267 PNVYTYNSMICRCCNDGKLNNAFELFDEMRERGVACNVVTYNTLIGGLCQERRVLEAERL 326
Query: 329 FKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAK 388
M+RD SP++ SY T++ Y + +++ A F ++K G P++ TY LI G+++
Sbjct: 327 MCRMKRDGLSPNLISYNTLIDGYCSIGNLDKASSLFNQMKSSGQSPSLATYNILIAGFSE 386
Query: 389 VNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKA 448
N + ++ +M G+ P++ +T +MDA ++ + + A Y ME G D
Sbjct: 387 AKNSAGVTDMVREMEARGLSPSKVTYTILMDALVRSDNIEKAFQIYSSMEKAGLVADIYI 446
Query: 449 KNILLSLAKTADERNEANELLGNFNHPNNEP 479
+L+ + EA++L + + + +P
Sbjct: 447 YGVLIHGLCVVGDMKEASKLFKSLDEMHLKP 477
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 78/329 (23%), Positives = 148/329 (44%), Gaps = 6/329 (1%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N+ + +LI + K G ++ M G P+V ++ +++ G+ NA +F
Sbjct: 233 NQYTYTVLINGFFKMGLKKDGIELYEKMKLTGIVPNVYTYNSMICRCCNDGKLNNAFELF 292
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
M+ G + +TY ++ + + EAE + + ++ L P+ ++ +I Y
Sbjct: 293 DEMRERGVACNVVTYNTLIGGLCQERRVLEAERLMCRM---KRDGLSPNLISYNTLIDGY 349
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSKIYD---QMQRAGLQPDV 271
G +KA LF M G S TYN L++ + K + + D +M+ GL P
Sbjct: 350 CSIGNLDKASSLFNQMKSSGQSPSLATYNILIAGFSEAKNSAGVTDMVREMEARGLSPSK 409
Query: 272 VSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKC 331
V+Y +L++A ++ E+A ++ M AG+ Y +L+ + G + +A +FK
Sbjct: 410 VTYTILMDALVRSDNIEKAFQIYSSMEKAGLVADIYIYGVLIHGLCVVGDMKEASKLFKS 469
Query: 332 MRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNN 391
+ P+ Y TM+ Y A + + + ++G VPNV +Y + I+ K
Sbjct: 470 LDEMHLKPNDVIYNTMIYGYCKEGSSYRALRLLKEMGENGMVPNVASYNSTIQILCKDEK 529
Query: 392 LEKMMEIYDKMRVNGIKPNQTIFTTIMDA 420
+ + M G+KP+ +I+ I A
Sbjct: 530 WTEAEVLLKDMIELGLKPSISIWNMISKA 558
>gi|357122825|ref|XP_003563115.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g11690-like [Brachypodium distachyon]
Length = 410
Score = 142 bits (357), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 93/371 (25%), Positives = 175/371 (47%), Gaps = 41/371 (11%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
L+ Y + GD +A++V M + G P+ V+ TAL+ Y GR + A+F +M+ G
Sbjct: 44 LVHGYCRSGDVAEAQRVFDVMPRLGLTPNEVTFTALIHGYFIHGRREKGLALFEKMRIGG 103
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
P+ TY I L+ E + + G +E
Sbjct: 104 IEPNLYTYNI--------------------LVGE------------------WCRTGEFE 125
Query: 222 KARKLFALMAERGVQQSTVTYNSLMSFETNY---KEVSKIYDQMQRAGLQPDVVSYALLI 278
+AR LF M +G+ ++ V+YN+L++ Y K+ +++ + M+R G++P VV++ LL+
Sbjct: 126 RARLLFEEMPAKGITRNVVSYNTLIAGLCRYRKMKDATQLLELMRREGIRPSVVTFNLLV 185
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCS 338
+ YGKA + AL +M AG +P+ YN L+ F + + +A F M+ +
Sbjct: 186 DGYGKAGKMSNALHFSNQMRMAGYQPSAVTYNALIAGFCRARDMIRANRAFSDMKERGLA 245
Query: 339 PDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEI 398
P +YT ++ A+ +DM+ A + F +++ G +V TYG L+ N++ ++
Sbjct: 246 PTKVTYTILIDAFARENDMDKAFEMFAGMEKAGLEVDVRTYGVLVHALCMEGNMKDARKL 305
Query: 399 YDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKT 458
+ + G++ I+ ++ YG+ A+ EM GF P+ + + + +
Sbjct: 306 FQSIGEKGLQVGNVIYDMLIYGYGREGSSYKAMKLIMEMRKKGFVPNSASYGLTIRILCN 365
Query: 459 ADERNEANELL 469
+ +EA L+
Sbjct: 366 DGKCSEAEALI 376
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 57/235 (24%), Positives = 116/235 (49%)
Query: 254 EVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILL 313
E +++D M R GL P+ V++ LI+ Y R E+ LA+FE+M G+ P YNIL+
Sbjct: 56 EAQRVFDVMPRLGLTPNEVTFTALIHGYFIHGRREKGLALFEKMRIGGIEPNLYTYNILV 115
Query: 314 DAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFV 373
+ +G ++AR +F+ M + ++ SY T+++ M+ A + ++++G
Sbjct: 116 GEWCRTGEFERARLLFEEMPAKGITRNVVSYNTLIAGLCRYRKMKDATQLLELMRREGIR 175
Query: 374 PNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVW 433
P+V+T+ L+ GY K + + ++MR+ G +P+ + ++ + + +D A
Sbjct: 176 PSVVTFNLLVDGYGKAGKMSNALHFSNQMRMAGYQPSAVTYNALIAGFCRARDMIRANRA 235
Query: 434 YKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGINGLSISV 488
+ +M+ G P + IL+ ++ ++A E+ E + + V
Sbjct: 236 FSDMKERGLAPTKVTYTILIDAFARENDMDKAFEMFAGMEKAGLEVDVRTYGVLV 290
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 72/263 (27%), Positives = 131/263 (49%), Gaps = 10/263 (3%)
Query: 61 DLVLGTLVRLKQLKKWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLS 120
+ ++ L R +++K +++LE +R + + + F +L+ YGK G + A +
Sbjct: 147 NTLIAGLCRYRKMKD---ATQLLELMRREGIRP-SVVTFNLLVDGYGKAGKMSNALHFSN 202
Query: 121 FMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEAN 180
M GY PS V++ AL+ + R A F M+ G P+ +TY I++ F N
Sbjct: 203 QMRMAGYQPSAVTYNALIAGFCRARDMIRANRAFSDMKERGLAPTKVTYTILIDAFAREN 262
Query: 181 KFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTV 240
+A E+F + EK+ L+ D + + ++++ G + ARKLF + E+G+Q V
Sbjct: 263 DMDKAFEMFAGM---EKAGLEVDVRTYGVLVHALCMEGNMKDARKLFQSIGEKGLQVGNV 319
Query: 241 TYNSLM---SFETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEM 297
Y+ L+ E + + K+ +M++ G P+ SY L I + EA A+ ++M
Sbjct: 320 IYDMLIYGYGREGSSYKAMKLIMEMRKKGFVPNSASYGLTIRILCNDGKCSEAEALIDDM 379
Query: 298 LDAGVRPTHKAYNILLDAFAISG 320
+ AGV+ + +LL+A A G
Sbjct: 380 VRAGVQTSESVRQVLLNAKARQG 402
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 54/230 (23%), Positives = 102/230 (44%)
Query: 270 DVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVF 329
DV + L++ Y ++ EA VF+ M G+ P + L+ + I G ++ +F
Sbjct: 37 DVAACTALVHGYCRSGDVAEAQRVFDVMPRLGLTPNEVTFTALIHGYFIHGRREKGLALF 96
Query: 330 KCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKV 389
+ MR P++ +Y ++ + + E A F + G NV++Y TLI G +
Sbjct: 97 EKMRIGGIEPNLYTYNILVGEWCRTGEFERARLLFEEMPAKGITRNVVSYNTLIAGLCRY 156
Query: 390 NNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAK 449
++ ++ + MR GI+P+ F ++D YGK +A+ + +M G+ P
Sbjct: 157 RKMKDATQLLELMRREGIRPSVVTFNLLVDGYGKAGKMSNALHFSNQMRMAGYQPSAVTY 216
Query: 450 NILLSLAKTADERNEANELLGNFNHPNNEPGINGLSISVDEEDDDDDDDE 499
N L++ A + AN + P +I +D ++D D+
Sbjct: 217 NALIAGFCRARDMIRANRAFSDMKERGLAPTKVTYTILIDAFARENDMDK 266
>gi|449475395|ref|XP_004154439.1| PREDICTED: pentatricopeptide repeat-containing protein At5g48730,
chloroplastic-like [Cucumis sativus]
Length = 511
Score = 142 bits (357), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 104/382 (27%), Positives = 183/382 (47%), Gaps = 14/382 (3%)
Query: 51 ERTRG-----QPLPKDLVLGTLVRLKQLKKWNVVSEVLEWLRIQSWWDFNEMDFLMLITA 105
ER RG + LP+ ++ R+ L+ W +V E LR Q W+ ++ LI
Sbjct: 106 ERKRGPNNSKKLLPRTVLEALHDRITTLR-WESALKVFELLREQLWYRPYAGMYIKLIVM 164
Query: 106 YGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG-PRP 164
GK KA ++ M ++G S S+TAL+ AY R G A +I M++S +P
Sbjct: 165 LGKCKQQEKAYELFQEMIEEGCEVSHESYTALLSAYSRSGLLDEAFSILNEMKNSPDCQP 224
Query: 165 SALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKAR 224
TY I++K ++ F +A+ + L D +KP+ ++ I Y KA + +
Sbjct: 225 DVHTYSILIKSCLQVFAFNKAQTL---LSDMVTRGIKPNTITYNTFIDAYGKAKMFAEME 281
Query: 225 KLFA-LMAERGVQQSTVTYNS-LMSF--ETNYKEVSKIYDQMQRAGLQPDVVSYALLINA 280
+ ++ + G + T NS L +F + + K Y++ Q AG+QP + ++ +L+++
Sbjct: 282 SILVDMLNDDGCKPDVWTMNSTLRAFGRSGQLETMEKCYEKFQEAGIQPSIQTFNILLDS 341
Query: 281 YGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPD 340
YGKA E+ AV E M T YNI++DAF +G + Q +F+ MR +R P
Sbjct: 342 YGKAESYEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGNLKQMEHLFRLMRSERIKPS 401
Query: 341 ICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYD 400
+ +++ AY A E + ++ + + + Y L+ Y ++ +M ++
Sbjct: 402 CVTLCSLVRAYGQAGKREKIDSVLNLVENSDIMLDTVFYNCLVDAYGRLECFAEMKKVLG 461
Query: 401 KMRVNGIKPNQTIFTTIMDAYG 422
M G KP++T + T+ AY
Sbjct: 462 MMEQRGCKPDKTTYRTMARAYS 483
Score = 42.4 bits (98), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 27/105 (25%), Positives = 51/105 (48%), Gaps = 5/105 (4%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
L+ AYG+ G K + VL+ + V + L++AYGR + + + M+ G
Sbjct: 408 LVRAYGQAGKREKIDSVLNLVENSDIMLDTVFYNCLVDAYGRLECFAEMKKVLGMMEQRG 467
Query: 162 PRPSALTYQIILKLFVE---ANKFKEAEEVFMTLLDEEKSPLKPD 203
+P TY+ + + + + AN KE +E+ T +++ +PD
Sbjct: 468 CKPDKTTYRTMARAYSDGGMANHAKEIQELITTAEPSKRT--RPD 510
>gi|357111070|ref|XP_003557338.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g06920-like [Brachypodium distachyon]
Length = 878
Score = 142 bits (357), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 80/330 (24%), Positives = 162/330 (49%), Gaps = 6/330 (1%)
Query: 93 DFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEA 152
D N + + LI + G K+ M ++G P + M+ + G + A
Sbjct: 487 DANPIIYTSLIRNFFMHGRKEDGHKIYKEMIRRGGRPDLTLLNTYMDCVFKAGEVEKGRA 546
Query: 153 IFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIY 212
IF M+S G P +Y I++ +A + +E +F + + D + ++ ++
Sbjct: 547 IFEDMKSFGFLPDVRSYSILIHGLTKAGQARETSNIFQAM---SQQGFALDARAYNAVVD 603
Query: 213 MYKKAGGYEKARKLFALMAERGVQQSTVTYNSL---MSFETNYKEVSKIYDQMQRAGLQP 269
K+G +KA ++ M + V + TY S+ ++ E ++++ + G++
Sbjct: 604 GLCKSGKVDKAYEVLEEMKVKHVHPTVATYGSIVDGLAKIDRLDEAYMLFEEAKSKGIEL 663
Query: 270 DVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVF 329
+V+ Y+ LI+ +GK R +EA + EEM+ G+ P +N L+DA + +D+A F
Sbjct: 664 NVILYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLMDALVKTEEIDEALICF 723
Query: 330 KCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKV 389
+ M+ +CSP+ +Y+ +++ A F++ +++ G +PNV+TY T+I G AKV
Sbjct: 724 QSMKEMKCSPNTYTYSILINGLCRVQKYNKAFVFWQEMQKQGLIPNVVTYTTMISGLAKV 783
Query: 390 NNLEKMMEIYDKMRVNGIKPNQTIFTTIMD 419
N+ ++++ + NG P+ F +++
Sbjct: 784 GNITDAYSLFERFKTNGGIPDSASFNALIE 813
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 101/436 (23%), Positives = 206/436 (47%), Gaps = 16/436 (3%)
Query: 37 QIEEVGSAVAVLRSERTRGQPLPKDLVLGTLVRLKQLKKWNVVSEVLEWLRIQS--WWDF 94
++E+ + +R + R +++G L +Q ++ LE LR ++
Sbjct: 156 RLEDAFRVIGAMRHLKFRPPFSAYTVLIGALAEARQPER------ALELLRQMQDVGYEV 209
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
+ F L+ A ++G A ++ + P +V + ++ +G+ G A F
Sbjct: 210 SVPLFTTLVRALAREGQMEPALALVDEVKGSCLEPDIVLYNVCIDCFGKAGSVDMAWKFF 269
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
+++ G RP ++Y ++ + +A + EAEE+F + E P ++ MI Y
Sbjct: 270 HELKAHGLRPDDVSYTSMVWVLCKAGRLGEAEELFGQMEAERDVPC---AYAYNTMIMGY 326
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSK---IYDQMQRAGLQPDV 271
A ++ A KL + ERG S V++NS+++ ++V + ++D M++ +P++
Sbjct: 327 GSAERFDDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALTLFDVMKKDA-KPNI 385
Query: 272 VSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKC 331
+Y ++I+ A R EA + +EM AG+ P + NI++D + +++A +F+
Sbjct: 386 STYNIIIDMLCMAGRVNEAYKIRDEMELAGLFPNLLSVNIMVDRLCKANQLEEAHRIFES 445
Query: 332 MRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNN 391
C+P+ +Y +++ ++ A + F ++ G N I Y +LI+ +
Sbjct: 446 ASERGCNPNSVTYCSLIDGLGKKGKIDDAYRLFEKMLDAGHDANPIIYTSLIRNFFMHGR 505
Query: 392 LEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNI 451
E +IY +M G +P+ T+ T MD K + + +++M+S GF PD ++ +I
Sbjct: 506 KEDGHKIYKEMIRRGGRPDLTLLNTYMDCVFKAGEVEKGRAIFEDMKSFGFLPDVRSYSI 565
Query: 452 LL-SLAKTADERNEAN 466
L+ L K R +N
Sbjct: 566 LIHGLTKAGQARETSN 581
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 86/378 (22%), Positives = 174/378 (46%), Gaps = 6/378 (1%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + + LI GK+G + A ++ M G+ + + +T+L+ + GR ++ I+
Sbjct: 454 NSVTYCSLIDGLGKKGKIDDAYRLFEKMLDAGHDANPIIYTSLIRNFFMHGRKEDGHKIY 513
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
+ M G RP + +A + ++ +F D + PD + + ++I+
Sbjct: 514 KEMIRRGGRPDLTLLNTYMDCVFKAGEVEKGRAIFE---DMKSFGFLPDVRSYSILIHGL 570
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSKIYD---QMQRAGLQPDV 271
KAG + +F M+++G YN+++ +V K Y+ +M+ + P V
Sbjct: 571 TKAGQARETSNIFQAMSQQGFALDARAYNAVVDGLCKSGKVDKAYEVLEEMKVKHVHPTV 630
Query: 272 VSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKC 331
+Y +++ K R +EA +FEE G+ Y+ L+D F G +D+A + +
Sbjct: 631 ATYGSIVDGLAKIDRLDEAYMLFEEAKSKGIELNVILYSSLIDGFGKVGRIDEAYLILEE 690
Query: 332 MRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNN 391
M + +P++ ++ +++ A V +++ A F+ +K+ PN TY LI G +V
Sbjct: 691 MMKKGLTPNVYTWNSLMDALVKTEEIDEALICFQSMKEMKCSPNTYTYSILINGLCRVQK 750
Query: 392 LEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNI 451
K + +M+ G+ PN +TT++ K + A ++ ++ G PD + N
Sbjct: 751 YNKAFVFWQEMQKQGLIPNVVTYTTMISGLAKVGNITDAYSLFERFKTNGGIPDSASFNA 810
Query: 452 LLSLAKTADERNEANELL 469
L+ A+ EA ++
Sbjct: 811 LIEGMSNANRPMEAYQVF 828
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 91/359 (25%), Positives = 168/359 (46%), Gaps = 10/359 (2%)
Query: 101 MLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSS 160
++I G N+A K+ M G P+++S +++ + + + A IF
Sbjct: 390 IIIDMLCMAGRVNEAYKIRDEMELAGLFPNLLSVNIMVDRLCKANQLEEAHRIFESASER 449
Query: 161 GPRPSALTYQIILKLFVEANKFKEAEEVFMTLLD--EEKSPLKPDQKMFHMMIYMYKKAG 218
G P+++TY ++ + K +A +F +LD + +P+ ++ +I + G
Sbjct: 450 GCNPNSVTYCSLIDGLGKKGKIDDAYRLFEKMLDAGHDANPI-----IYTSLIRNFFMHG 504
Query: 219 GYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSK---IYDQMQRAGLQPDVVSYA 275
E K++ M RG + N+ M EV K I++ M+ G PDV SY+
Sbjct: 505 RKEDGHKIYKEMIRRGGRPDLTLLNTYMDCVFKAGEVEKGRAIFEDMKSFGFLPDVRSYS 564
Query: 276 LLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRD 335
+LI+ KA + E +F+ M G +AYN ++D SG VD+A V + M+
Sbjct: 565 ILIHGLTKAGQARETSNIFQAMSQQGFALDARAYNAVVDGLCKSGKVDKAYEVLEEMKVK 624
Query: 336 RCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKM 395
P + +Y +++ ++ A F K G NVI Y +LI G+ KV +++
Sbjct: 625 HVHPTVATYGSIVDGLAKIDRLDEAYMLFEEAKSKGIELNVILYSSLIDGFGKVGRIDEA 684
Query: 396 MEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLS 454
I ++M G+ PN + ++MDA K ++ D A++ ++ M+ P+ +IL++
Sbjct: 685 YLILEEMMKKGLTPNVYTWNSLMDALVKTEEIDEALICFQSMKEMKCSPNTYTYSILIN 743
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 87/366 (23%), Positives = 156/366 (42%), Gaps = 36/366 (9%)
Query: 111 DFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQ 170
D EKVL M+ GY + AL+ R R ++A + M+ RP Y
Sbjct: 121 DLAALEKVLEEMSHLGYGLPNPACAALVATLVRSRRLEDAFRVIGAMRHLKFRPPFSAYT 180
Query: 171 IILKLFVEANKFKEAEEVF-------------------------------MTLLDEEK-S 198
+++ EA + + A E+ + L+DE K S
Sbjct: 181 VLIGALAEARQPERALELLRQMQDVGYEVSVPLFTTLVRALAREGQMEPALALVDEVKGS 240
Query: 199 PLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSL---MSFETNYKEV 255
L+PD ++++ I + KAG + A K F + G++ V+Y S+ + E
Sbjct: 241 CLEPDIVLYNVCIDCFGKAGSVDMAWKFFHELKAHGLRPDDVSYTSMVWVLCKAGRLGEA 300
Query: 256 SKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDA 315
+++ QM+ P +Y +I YG A R ++A + E + + G P+ ++N +L
Sbjct: 301 EELFGQMEAERDVPCAYAYNTMIMGYGSAERFDDAYKLLERLRERGCIPSVVSFNSILTC 360
Query: 316 FAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPN 375
VD+A T+F M++D P+I +Y ++ A + A K ++ G PN
Sbjct: 361 LGKKRKVDEALTLFDVMKKD-AKPNISTYNIIIDMLCMAGRVNEAYKIRDEMELAGLFPN 419
Query: 376 VITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYK 435
+++ ++ K N LE+ I++ G PN + +++D GK D A ++
Sbjct: 420 LLSVNIMVDRLCKANQLEEAHRIFESASERGCNPNSVTYCSLIDGLGKKGKIDDAYRLFE 479
Query: 436 EMESCG 441
+M G
Sbjct: 480 KMLDAG 485
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 73/370 (19%), Positives = 171/370 (46%), Gaps = 7/370 (1%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + +++ K +A ++ +++G P+ V++ +L++ G+ G+ +A +F
Sbjct: 419 NLLSVNIMVDRLCKANQLEEAHRIFESASERGCNPNSVTYCSLIDGLGKKGKIDDAYRLF 478
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
+M +G + + Y +++ F + ++ +++ ++ +PD + + +
Sbjct: 479 EKMLDAGHDANPIIYTSLIRNFFMHGRKEDGHKIYKEMIRRGG---RPDLTLLNTYMDCV 535
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFET---NYKEVSKIYDQMQRAGLQPDV 271
KAG EK R +F M G +Y+ L+ T +E S I+ M + G D
Sbjct: 536 FKAGEVEKGRAIFEDMKSFGFLPDVRSYSILIHGLTKAGQARETSNIFQAMSQQGFALDA 595
Query: 272 VSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKC 331
+Y +++ K+ + ++A V EEM V PT Y ++D A +D+A +F+
Sbjct: 596 RAYNAVVDGLCKSGKVDKAYEVLEEMKVKHVHPTVATYGSIVDGLAKIDRLDEAYMLFEE 655
Query: 332 MRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNN 391
+ ++ Y++++ + ++ A + + G PNV T+ +L+ K
Sbjct: 656 AKSKGIELNVILYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLMDALVKTEE 715
Query: 392 LEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNI 451
+++ + + M+ PN ++ +++ + + ++ A V+++EM+ G P+
Sbjct: 716 IDEALICFQSMKEMKCSPNTYTYSILINGLCRVQKYNKAFVFWQEMQKQGLIPNVVTYTT 775
Query: 452 LLS-LAKTAD 460
++S LAK +
Sbjct: 776 MISGLAKVGN 785
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 106/229 (46%), Gaps = 1/229 (0%)
Query: 261 QMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISG 320
QMQ G + V + L+ A + + E ALA+ +E+ + + P YN+ +D F +G
Sbjct: 201 QMQDVGYEVSVPLFTTLVRALAREGQMEPALALVDEVKGSCLEPDIVLYNVCIDCFGKAG 260
Query: 321 MVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYG 380
VD A F ++ PD SYT+M+ A + AE+ F +++ + VP Y
Sbjct: 261 SVDMAWKFFHELKAHGLRPDDVSYTSMVWVLCKAGRLGEAEELFGQMEAERDVPCAYAYN 320
Query: 381 TLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESC 440
T+I GY + ++ +++R G P+ F +I+ GK + D A+ + M+
Sbjct: 321 TMIMGYGSAERFDDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALTLFDVMKK- 379
Query: 441 GFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGINGLSISVD 489
P+ NI++ + A NEA ++ P + ++I VD
Sbjct: 380 DAKPNISTYNIIIDMLCMAGRVNEAYKIRDEMELAGLFPNLLSVNIMVD 428
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 50/213 (23%), Positives = 96/213 (45%), Gaps = 4/213 (1%)
Query: 267 LQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQAR 326
L PD + L ++ A E+ V EEM G + A L+ S ++ A
Sbjct: 106 LPPDAYNAVLPFLSHDLAALEK----VLEEMSHLGYGLPNPACAALVATLVRSRRLEDAF 161
Query: 327 TVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGY 386
V MR + P +YT ++ A A E A + R+++ G+ +V + TL++
Sbjct: 162 RVIGAMRHLKFRPPFSAYTVLIGALAEARQPERALELLRQMQDVGYEVSVPLFTTLVRAL 221
Query: 387 AKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQ 446
A+ +E + + D+++ + ++P+ ++ +D +GK D A ++ E+++ G PD
Sbjct: 222 AREGQMEPALALVDEVKGSCLEPDIVLYNVCIDCFGKAGSVDMAWKFFHELKAHGLRPDD 281
Query: 447 KAKNILLSLAKTADERNEANELLGNFNHPNNEP 479
+ ++ + A EA EL G + P
Sbjct: 282 VSYTSMVWVLCKAGRLGEAEELFGQMEAERDVP 314
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 94/207 (45%), Gaps = 6/207 (2%)
Query: 125 KGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKE 184
KG +V+ +++L++ +G+ GR A I M G P+ T+ ++ V+ + E
Sbjct: 659 KGIELNVILYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLMDALVKTEEIDE 718
Query: 185 AEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNS 244
A F ++ + + SP + + ++I + Y KA + M ++G+ + VTY +
Sbjct: 719 ALICFQSMKEMKCSP---NTYTYSILINGLCRVQKYNKAFVFWQEMQKQGLIPNVVTYTT 775
Query: 245 LMSFETNYKEVSKIYDQMQR---AGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAG 301
++S ++ Y +R G PD S+ LI A R EA VFEE G
Sbjct: 776 MISGLAKVGNITDAYSLFERFKTNGGIPDSASFNALIEGMSNANRPMEAYQVFEETRLRG 835
Query: 302 VRPTHKAYNILLDAFAISGMVDQARTV 328
R K LLDA + ++QA V
Sbjct: 836 CRLNVKTCISLLDALNKTECLEQAAIV 862
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 64/334 (19%), Positives = 139/334 (41%), Gaps = 11/334 (3%)
Query: 153 IFRRMQSSGPRP---SALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHM 209
I R++ S+ P P + L+ +++ LF + + L +P +
Sbjct: 24 IHRQLSSNSPPPVTSNTLSVELLRLLFAAPAWTPDLAGAVSSTLSSAPAPAH------DV 77
Query: 210 MIYMYKKAGGYEKARKLFALMAERGVQQSTV-TYNSLMSFETN-YKEVSKIYDQMQRAGL 267
++Y+ + A F L + Q YN+++ F ++ + K+ ++M G
Sbjct: 78 VVYVLRSLKNPSLAAPFFLLASASSSQPLPPDAYNAVLPFLSHDLAALEKVLEEMSHLGY 137
Query: 268 QPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQART 327
+ A L+ ++RR E+A V M RP AY +L+ A A + ++A
Sbjct: 138 GLPNPACAALVATLVRSRRLEDAFRVIGAMRHLKFRPPFSAYTVLIGALAEARQPERALE 197
Query: 328 VFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYA 387
+ + M+ + +TT++ A ME A +K P+++ Y I +
Sbjct: 198 LLRQMQDVGYEVSVPLFTTLVRALAREGQMEPALALVDEVKGSCLEPDIVLYNVCIDCFG 257
Query: 388 KVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQK 447
K +++ + + +++ +G++P+ +T+++ K A + +ME+ P
Sbjct: 258 KAGSVDMAWKFFHELKAHGLRPDDVSYTSMVWVLCKAGRLGEAEELFGQMEAERDVPCAY 317
Query: 448 AKNILLSLAKTADERNEANELLGNFNHPNNEPGI 481
A N ++ +A+ ++A +LL P +
Sbjct: 318 AYNTMIMGYGSAERFDDAYKLLERLRERGCIPSV 351
>gi|357121285|ref|XP_003562351.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Brachypodium distachyon]
Length = 624
Score = 142 bits (357), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 84/362 (23%), Positives = 174/362 (48%), Gaps = 6/362 (1%)
Query: 114 KAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIIL 173
K + LS M + G P + + +++ + G ++ A I RM S G +P+ + Y +L
Sbjct: 249 KVHEALSQMAQHGCTPDIRMYATIIDGICKEGHHEVANEILSRMPSYGLKPNVVCYNTVL 308
Query: 174 KLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAER 233
K A+++++AEE +T + ++ PL D F++++ + + G ++ +L M E
Sbjct: 309 KGICSADRWEKAEE-LLTEMYQKNCPL--DDVTFNILVDFFCQNGLVDRVIELLEQMLEH 365
Query: 234 GVQQSTVTYNSLMSF---ETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEA 290
G +TY ++++ E E + M G +P+ +SY +++ R +A
Sbjct: 366 GCMPDVITYTTVINGFCKEGLIDEAVMLLKNMPSCGCKPNTISYTIVLKGLCSTERWVDA 425
Query: 291 LAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSA 350
+ M+ G P +N +++ G+V+QA + K M + C+PD+ SY+T++
Sbjct: 426 EELMSRMIQQGCLPNPVTFNTIINFLCKKGLVEQAIELLKQMLVNGCNPDLISYSTVIDG 485
Query: 351 YVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPN 410
A E A + + G PNVITY ++ A+ ++K+++++D ++ I+ +
Sbjct: 486 LGKAGKTEEALELLNVMINKGITPNVITYSSMAFALAREGRIDKVIQMFDNIQDATIRSD 545
Query: 411 QTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLG 470
++ ++ + K ++ D A+ + M S G P++ L+ + EA +LL
Sbjct: 546 AVLYNAVISSLCKRRETDLAIDFLAYMVSNGCMPNESTYTALIKGLASEGLLCEAQDLLS 605
Query: 471 NF 472
Sbjct: 606 EL 607
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 72/317 (22%), Positives = 142/317 (44%), Gaps = 42/317 (13%)
Query: 75 KWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSH 134
+W E+L + Q +++ F +L+ + + G ++ ++L M + G P V+++
Sbjct: 316 RWEKAEELLTEMY-QKNCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCMPDVITY 374
Query: 135 TALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLD 194
T ++ + + G A + + M S G +P+ ++Y I+LK ++ +AEE
Sbjct: 375 TTVINGFCKEGLIDEAVMLLKNMPSCGCKPNTISYTIVLKGLCSTERWVDAEE------- 427
Query: 195 EEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETN--- 251
L + M ++G + VT+N++++F
Sbjct: 428 -------------------------------LMSRMIQQGCLPNPVTFNTIINFLCKKGL 456
Query: 252 YKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNI 311
++ ++ QM G PD++SY+ +I+ GKA + EEAL + M++ G+ P Y+
Sbjct: 457 VEQAIELLKQMLVNGCNPDLISYSTVIDGLGKAGKTEEALELLNVMINKGITPNVITYSS 516
Query: 312 LLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDG 371
+ A A G +D+ +F ++ D Y ++S+ + + A F + +G
Sbjct: 517 MAFALAREGRIDKVIQMFDNIQDATIRSDAVLYNAVISSLCKRRETDLAIDFLAYMVSNG 576
Query: 372 FVPNVITYGTLIKGYAK 388
+PN TY LIKG A
Sbjct: 577 CMPNESTYTALIKGLAS 593
Score = 105 bits (263), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 89/391 (22%), Positives = 166/391 (42%), Gaps = 32/391 (8%)
Query: 82 VLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAY 141
VL+ + +S M + ++I + + G ++ A +VL ++ KG + ++ A
Sbjct: 138 VLDEMTSRSCVPIPPM-YHVIIESACRSGGYSSALRVLEALHAKGSTLDTGNCNLVINAI 196
Query: 142 GRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLK 201
G + R++ G ++Y +LK A ++ + EE L+DE
Sbjct: 197 CDQGCVDEGLEMLRKLPLFGCEADIVSYNAVLKGLCAAKRWGDVEE----LMDE------ 246
Query: 202 PDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLM---SFETNYKEVSKI 258
M+ K + + MA+ G Y +++ E +++ ++I
Sbjct: 247 --------MV----------KVHEALSQMAQHGCTPDIRMYATIIDGICKEGHHEVANEI 288
Query: 259 YDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAI 318
+M GL+P+VV Y ++ A R E+A + EM +NIL+D F
Sbjct: 289 LSRMPSYGLKPNVVCYNTVLKGICSADRWEKAEELLTEMYQKNCPLDDVTFNILVDFFCQ 348
Query: 319 SGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVIT 378
+G+VD+ + + M C PD+ +YTT+++ + ++ A + + G PN I+
Sbjct: 349 NGLVDRVIELLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLKNMPSCGCKPNTIS 408
Query: 379 YGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEME 438
Y ++KG E+ +M G PN F TI++ K + A+ K+M
Sbjct: 409 YTIVLKGLCSTERWVDAEELMSRMIQQGCLPNPVTFNTIINFLCKKGLVEQAIELLKQML 468
Query: 439 SCGFPPDQKAKNILLSLAKTADERNEANELL 469
G PD + + ++ A + EA ELL
Sbjct: 469 VNGCNPDLISYSTVIDGLGKAGKTEEALELL 499
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 88/416 (21%), Positives = 167/416 (40%), Gaps = 62/416 (14%)
Query: 103 ITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGP 162
+ G+ D +A ++ G A VV + A++ Y R G+ + A RR+ ++ P
Sbjct: 62 LCVAGRTADAVRA------LDAAGNAAGVVDYNAMVAGYCRVGQVEAA----RRLAAAVP 111
Query: 163 -RPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
P+A TY +++ + +A V + P+ P M+H++I ++GGY
Sbjct: 112 VPPNAYTYFPVVRGLCGRGRIADALAVLDEMTSRSCVPIPP---MYHVIIESACRSGGYS 168
Query: 222 KA-RKLFALMAER----------------------------------GVQQSTVTYNSLM 246
A R L AL A+ G + V+YN+++
Sbjct: 169 SALRVLEALHAKGSTLDTGNCNLVINAICDQGCVDEGLEMLRKLPLFGCEADIVSYNAVL 228
Query: 247 S----------FETNYKEVSKIYD---QMQRAGLQPDVVSYALLINAYGKARREEEALAV 293
E E+ K+++ QM + G PD+ YA +I+ K E A +
Sbjct: 229 KGLCAAKRWGDVEELMDEMVKVHEALSQMAQHGCTPDIRMYATIIDGICKEGHHEVANEI 288
Query: 294 FEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVN 353
M G++P YN +L + ++A + M + C D ++ ++ +
Sbjct: 289 LSRMPSYGLKPNVVCYNTVLKGICSADRWEKAEELLTEMYQKNCPLDDVTFNILVDFFCQ 348
Query: 354 ASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTI 413
++ + ++ + G +P+VITY T+I G+ K +++ + + M G KPN
Sbjct: 349 NGLVDRVIELLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLKNMPSCGCKPNTIS 408
Query: 414 FTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELL 469
+T ++ + + A M G P+ N +++ +A ELL
Sbjct: 409 YTIVLKGLCSTERWVDAEELMSRMIQQGCLPNPVTFNTIINFLCKKGLVEQAIELL 464
>gi|302775252|ref|XP_002971043.1| hypothetical protein SELMODRAFT_94769 [Selaginella moellendorffii]
gi|300161025|gb|EFJ27641.1| hypothetical protein SELMODRAFT_94769 [Selaginella moellendorffii]
Length = 457
Score = 142 bits (357), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 95/357 (26%), Positives = 171/357 (47%), Gaps = 9/357 (2%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + F L+ + KQG E++L M +G P+VVS+ L+E + R+ AE +
Sbjct: 9 NSVTFNALVNGFSKQGRPGDCERLLETMAARGIQPNVVSYNGLLEGLCKLERWHEAEELV 68
Query: 155 RRMQSSGPR--PSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIY 212
R M S G R P +TY +L + +A K +E+ E+ ++ L+PD M+ ++
Sbjct: 69 RDMISRGGRSTPDLVTYSTLLSGYCKAGKVEESRELLKEVISR---GLRPDALMYTKVMA 125
Query: 213 MYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSF---ETNYKEVSKIYDQMQRAGLQP 269
K+ +A +L M G + +T+N+L+S E N + + M +G++
Sbjct: 126 SLCKSARLGEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSLLQTMAASGVKA 185
Query: 270 DVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVF 329
DVV+Y L++ KA R +EA + E M +G P AY+ + SG V A V
Sbjct: 186 DVVTYNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGKVLNAHQVL 245
Query: 330 KCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRL-KQDGFVPNVITYGTLIKGYAK 388
+ MR P++ +Y T+L + ++ A + ++ DG NV+ Y T++ G K
Sbjct: 246 EQMRDSDHDPNVVTYNTILDGLCKSGKIDTALEMMEQMASSDGCGLNVVGYSTVVDGLCK 305
Query: 389 VNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPD 445
+ ++ + + M G +P+ ++++++ K + AV +EM G P+
Sbjct: 306 LGRTQEARSVMEAMARAGCRPDVVTYSSLVNGLCKAGKIEEAVEAVREMAMEGCKPN 362
Score = 125 bits (314), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 77/310 (24%), Positives = 146/310 (47%), Gaps = 12/310 (3%)
Query: 88 IQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRY 147
I++ + F LI+ ++ + A+ +L M G VV++ LM+ + GR
Sbjct: 144 IRAGCCPTLITFNTLISGCCREKNLEMADSLLQTMAASGVKADVVTYNTLMDGLCKAGRL 203
Query: 148 KNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMF 207
+ AE + RM++SG P + Y + ++ K A +V + D + P + +
Sbjct: 204 QEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGKVLNAHQVLEQMRDSDHDP---NVVTY 260
Query: 208 HMMIYMYKKAGGYEKARKLFALMAER-GVQQSTVTYNSLMSFETNY---KEVSKIYDQMQ 263
+ ++ K+G + A ++ MA G + V Y++++ +E + + M
Sbjct: 261 NTILDGLCKSGKIDTALEMMEQMASSDGCGLNVVGYSTVVDGLCKLGRTQEARSVMEAMA 320
Query: 264 RAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVD 323
RAG +PDVV+Y+ L+N KA + EEA+ EM G +P Y L+ G +
Sbjct: 321 RAGCRPDVVTYSSLVNGLCKAGKIEEAVEAVREMAMEGCKPNAVTYCSLVHGLCSCGRLA 380
Query: 324 QARTVFKCMRR-----DRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVIT 378
+A + + M D C P + +Y ++ A ++ A KFF+R++ G P+ ++
Sbjct: 381 EAERMVEEMSSGGGGGDHCPPSVSTYNALIGGLCKAGRIDDALKFFQRMRSQGCDPDGVS 440
Query: 379 YGTLIKGYAK 388
Y T+++G A+
Sbjct: 441 YSTIVEGLAR 450
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 61/263 (23%), Positives = 129/263 (49%), Gaps = 5/263 (1%)
Query: 196 EKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLM----SFETN 251
+++ P+ F+ ++ + K G +L MA RG+Q + V+YN L+ E
Sbjct: 2 DRTGCPPNSVTFNALVNGFSKQGRPGDCERLLETMAARGIQPNVVSYNGLLEGLCKLERW 61
Query: 252 YKEVSKIYDQMQRAGLQ-PDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYN 310
++ + D + R G PD+V+Y+ L++ Y KA + EE+ + +E++ G+RP Y
Sbjct: 62 HEAEELVRDMISRGGRSTPDLVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDALMYT 121
Query: 311 ILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQD 370
++ + S + +A + + M R C P + ++ T++S ++E A+ + +
Sbjct: 122 KVMASLCKSARLGEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSLLQTMAAS 181
Query: 371 GFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSA 430
G +V+TY TL+ G K L++ ++ ++M+ +G P+ +++ + K+ +A
Sbjct: 182 GVKADVVTYNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGKVLNA 241
Query: 431 VVWYKEMESCGFPPDQKAKNILL 453
++M P+ N +L
Sbjct: 242 HQVLEQMRDSDHDPNVVTYNTIL 264
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 63/258 (24%), Positives = 108/258 (41%), Gaps = 39/258 (15%)
Query: 262 MQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGM 321
M R G P+ V++ L+N + K R + + E M G++P +YN LL+
Sbjct: 1 MDRTGCPPNSVTFNALVNGFSKQGRPGDCERLLETMAARGIQPNVVSYNGLLEGLCKLER 60
Query: 322 VDQARTVFKCM--RRDRCSPDICSYTTMLSAYVNASDMEGAEKFF-----RRLKQD---- 370
+A + + M R R +PD+ +Y+T+LS Y A +E + + R L+ D
Sbjct: 61 WHEAEELVRDMISRGGRSTPDLVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDALMY 120
Query: 371 --------------------------GFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRV 404
G P +IT+ TLI G + NLE + M
Sbjct: 121 TKVMASLCKSARLGEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSLLQTMAA 180
Query: 405 NGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKA-KNILLSLAKTADERN 463
+G+K + + T+MD K A + M++ G PD A + + L K+ N
Sbjct: 181 SGVKADVVTYNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGKVLN 240
Query: 464 EANELLGNFNHPNNEPGI 481
A+++L +++P +
Sbjct: 241 -AHQVLEQMRDSDHDPNV 257
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/219 (22%), Positives = 99/219 (45%), Gaps = 13/219 (5%)
Query: 81 EVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFM-NKKGYAPSVVSHTALME 139
+VLE +R S D N + + ++ K G + A +++ M + G +VV ++ +++
Sbjct: 243 QVLEQMR-DSDHDPNVVTYNTILDGLCKSGKIDTALEMMEQMASSDGCGLNVVGYSTVVD 301
Query: 140 AYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSP 199
+ GR + A ++ M +G RP +TY ++ +A K +EA E + E
Sbjct: 302 GLCKLGRTQEARSVMEAMARAGCRPDVVTYSSLVNGLCKAGKIEEAVEAVREMAMEG--- 358
Query: 200 LKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERG-----VQQSTVTYNSLMSFETNYKE 254
KP+ + +++ G +A ++ M+ G S TYN+L+
Sbjct: 359 CKPNAVTYCSLVHGLCSCGRLAEAERMVEEMSSGGGGGDHCPPSVSTYNALIGGLCKAGR 418
Query: 255 VS---KIYDQMQRAGLQPDVVSYALLINAYGKARREEEA 290
+ K + +M+ G PD VSY+ ++ ++ R +A
Sbjct: 419 IDDALKFFQRMRSQGCDPDGVSYSTIVEGLARSGRALQA 457
>gi|218196467|gb|EEC78894.1| hypothetical protein OsI_19266 [Oryza sativa Indica Group]
gi|222630938|gb|EEE63070.1| hypothetical protein OsJ_17878 [Oryza sativa Japonica Group]
Length = 939
Score = 142 bits (357), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 92/414 (22%), Positives = 194/414 (46%), Gaps = 7/414 (1%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKG-YAPSVVSHTALMEAYGRGGRYKNAEAI 153
N + + +L+ Y K G +AE+V+ M + G V++ ++ Y + GR +A +
Sbjct: 287 NVVTYTLLVKGYCKDGRMEEAERVVKEMKETGDIVVDEVAYGMMINGYCQRGRMDDATRV 346
Query: 154 FRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYM 213
M+ +G + Y ++ + + +E ++V L + E ++PD+ ++ +I
Sbjct: 347 RNEMRDAGIHVNLFVYNTMINGLCKLGRMEEVQKV---LQEMEDVGMRPDKYSYNTLIDG 403
Query: 214 YKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVS---KIYDQMQRAGLQPD 270
Y + G KA ++ +M G+ +T+TYN+L+ + + +++ M + G+ P+
Sbjct: 404 YCREGSMRKAFEMCRMMVRNGLAATTLTYNTLLKGFCSLHAIDDALRLWFLMLKRGVAPN 463
Query: 271 VVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFK 330
+S + L++ KA + E+AL +++E L G+ +N +++ G + +A +
Sbjct: 464 EISCSTLLDGLFKAGKTEQALNLWKETLARGLAKNVITFNTVINGLCKIGRMAEAEELLD 523
Query: 331 CMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVN 390
M+ RC PD +Y T+ Y + A +++ GF P+V + + I G+
Sbjct: 524 RMKELRCPPDSLTYRTLFDGYCKLGQLGTATHLMNKMEHLGFAPSVEMFNSFITGHFIAK 583
Query: 391 NLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKN 450
K+ +I+ +M G+ PN + ++ + K + A Y EM + G P+ +
Sbjct: 584 QWHKVNDIHSEMSARGLSPNLVTYGALIAGWCKEGNLHEACNLYFEMVNNGMNPNVFICS 643
Query: 451 ILLSLAKTADERNEANELLGNFNHPNNEPGINGLSISVDEEDDDDDDDEDDDDN 504
L+S + +EAN +L + + PG + +I +D+ D D + +
Sbjct: 644 ALMSCFYKEGKVDEANLVLQKLVNIDMIPGCSISTIEIDKISHVVDTIADGNPH 697
Score = 139 bits (349), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 93/377 (24%), Positives = 177/377 (46%), Gaps = 5/377 (1%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
+E ++ AY + G +A + + M G ++V++ A+M+ Y G ++A I
Sbjct: 217 DEFTVAIMAKAYCRDGRVAQAVEFVEEMEGMGLEVNLVAYHAVMDCYCGMGWTEDARRIL 276
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
+Q G P+ +TY +++K + + + +EAE V + +E + D+ + MMI Y
Sbjct: 277 ESLQRKGLSPNVVTYTLLVKGYCKDGRMEEAERVVKEM--KETGDIVVDEVAYGMMINGY 334
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNY---KEVSKIYDQMQRAGLQPDV 271
+ G + A ++ M + G+ + YN++++ +EV K+ +M+ G++PD
Sbjct: 335 CQRGRMDDATRVRNEMRDAGIHVNLFVYNTMINGLCKLGRMEEVQKVLQEMEDVGMRPDK 394
Query: 272 VSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKC 331
SY LI+ Y + +A + M+ G+ T YN LL F +D A ++
Sbjct: 395 YSYNTLIDGYCREGSMRKAFEMCRMMVRNGLAATTLTYNTLLKGFCSLHAIDDALRLWFL 454
Query: 332 MRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNN 391
M + +P+ S +T+L A E A ++ G NVIT+ T+I G K+
Sbjct: 455 MLKRGVAPNEISCSTLLDGLFKAGKTEQALNLWKETLARGLAKNVITFNTVINGLCKIGR 514
Query: 392 LEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNI 451
+ + E+ D+M+ P+ + T+ D Y K +A +ME GF P + N
Sbjct: 515 MAEAEELLDRMKELRCPPDSLTYRTLFDGYCKLGQLGTATHLMNKMEHLGFAPSVEMFNS 574
Query: 452 LLSLAKTADERNEANEL 468
++ A + ++ N++
Sbjct: 575 FITGHFIAKQWHKVNDI 591
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 92/382 (24%), Positives = 175/382 (45%), Gaps = 7/382 (1%)
Query: 92 WDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAE 151
+ F+ + F +L+ A+ G + A V M K G PS+ S L+ + G A
Sbjct: 144 FTFSAVSFDLLLRAHADAGQLSSALNVFDGMGKVGCRPSLRSCNRLLNKLVQSGDPGMAA 203
Query: 152 AIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMI 211
++ +M+ +G P T I+ K + + +A E + E L+ + +H ++
Sbjct: 204 MVYGQMRIAGVLPDEFTVAIMAKAYCRDGRVAQAVEFVEEM---EGMGLEVNLVAYHAVM 260
Query: 212 YMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLM---SFETNYKEVSKIYDQMQRAG-L 267
Y G E AR++ + +G+ + VTY L+ + +E ++ +M+ G +
Sbjct: 261 DCYCGMGWTEDARRILESLQRKGLSPNVVTYTLLVKGYCKDGRMEEAERVVKEMKETGDI 320
Query: 268 QPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQART 327
D V+Y ++IN Y + R ++A V EM DAG+ YN +++ G +++ +
Sbjct: 321 VVDEVAYGMMINGYCQRGRMDDATRVRNEMRDAGIHVNLFVYNTMINGLCKLGRMEEVQK 380
Query: 328 VFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYA 387
V + M PD SY T++ Y M A + R + ++G +TY TL+KG+
Sbjct: 381 VLQEMEDVGMRPDKYSYNTLIDGYCREGSMRKAFEMCRMMVRNGLAATTLTYNTLLKGFC 440
Query: 388 KVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQK 447
++ ++ + ++ M G+ PN+ +T++D K + A+ +KE + G +
Sbjct: 441 SLHAIDDALRLWFLMLKRGVAPNEISCSTLLDGLFKAGKTEQALNLWKETLARGLAKNVI 500
Query: 448 AKNILLSLAKTADERNEANELL 469
N +++ EA ELL
Sbjct: 501 TFNTVINGLCKIGRMAEAEELL 522
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 94/414 (22%), Positives = 180/414 (43%), Gaps = 32/414 (7%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
NE+ L+ K G +A + +G A +V++ ++ + GR AE +
Sbjct: 463 NEISCSTLLDGLFKAGKTEQALNLWKETLARGLAKNVITFNTVINGLCKIGRMAEAEELL 522
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
RM+ P +LTY+ + + + + A + + E P +MF+ I +
Sbjct: 523 DRMKELRCPPDSLTYRTLFDGYCKLGQLGTATHLMNKM---EHLGFAPSVEMFNSFITGH 579
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSLMSF---ETNYKEVSKIYDQMQRAGLQPDV 271
A + K + + M+ RG+ + VTY +L++ E N E +Y +M G+ P+V
Sbjct: 580 FIAKQWHKVNDIHSEMSARGLSPNLVTYGALIAGWCKEGNLHEACNLYFEMVNNGMNPNV 639
Query: 272 VSYALLINAYGKARREEEALAVFEEMLDAGVRP-----------------------THKA 308
+ L++ + K + +EA V +++++ + P H A
Sbjct: 640 FICSALMSCFYKEGKVDEANLVLQKLVNIDMIPGCSISTIEIDKISHVVDTIADGNPHSA 699
Query: 309 ---YNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFR 365
+N+++ SG + A+++F+ +R R PD +Y++++ + ++ A
Sbjct: 700 NVMWNVIIFGLCKSGRIADAKSLFESLRNKRFLPDNFTYSSLIHGCAASGSIDEAFSLRD 759
Query: 366 RLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNK 425
+ G PN+ITY +LI G K L + + +++K++ GI PN + T++D Y K
Sbjct: 760 VMLSAGLTPNIITYNSLIYGLCKSGKLSRAVNLFNKLQSKGISPNGITYNTLIDEYCKEG 819
Query: 426 DFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEP 479
A ++M G P +IL+ T EA +LL N +P
Sbjct: 820 KTTEAFKLKQKMVEEGIQPTVITYSILIYGLCTQGYMEEAIKLLDQMIENNVDP 873
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 82/341 (24%), Positives = 158/341 (46%), Gaps = 26/341 (7%)
Query: 99 FLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQ 158
F IT + ++K + S M+ +G +P++V++ AL+ + + G A ++ M
Sbjct: 572 FNSFITGHFIAKQWHKVNDIHSEMSARGLSPNLVTYGALIAGWCKEGNLHEACNLYFEMV 631
Query: 159 SSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSP------LKPDQ-------- 204
++G P+ ++ F + K EA V L++ + P ++ D+
Sbjct: 632 NNGMNPNVFICSALMSCFYKEGKVDEANLVLQKLVNIDMIPGCSISTIEIDKISHVVDTI 691
Query: 205 ---------KMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLM---SFETNY 252
M++++I+ K+G A+ LF + + TY+SL+ + +
Sbjct: 692 ADGNPHSANVMWNVIIFGLCKSGRIADAKSLFESLRNKRFLPDNFTYSSLIHGCAASGSI 751
Query: 253 KEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNIL 312
E + D M AGL P++++Y LI K+ + A+ +F ++ G+ P YN L
Sbjct: 752 DEAFSLRDVMLSAGLTPNIITYNSLIYGLCKSGKLSRAVNLFNKLQSKGISPNGITYNTL 811
Query: 313 LDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGF 372
+D + G +A + + M + P + +Y+ ++ ME A K ++ ++
Sbjct: 812 IDEYCKEGKTTEAFKLKQKMVEEGIQPTVITYSILIYGLCTQGYMEEAIKLLDQMIENNV 871
Query: 373 VPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTI 413
PN ITY TLI GY K N+E++ ++YD+M + G+ P I
Sbjct: 872 DPNYITYCTLIHGYIKSGNMEEISKLYDEMHIRGLLPTNWI 912
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 82/329 (24%), Positives = 148/329 (44%), Gaps = 29/329 (8%)
Query: 129 PSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEV 188
PS+VSH L+ R R+ +A A+ + S P L F EV
Sbjct: 98 PSLVSHAQLLHILARARRFHDARAL---LSSLPPHAEPL--------------FPHLAEV 140
Query: 189 FMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSF 248
+ S F +++ + AG A +F M + G + S + N L++
Sbjct: 141 YRDFTFSAVS--------FDLLLRAHADAGQLSSALNVFDGMGKVGCRPSLRSCNRLLNK 192
Query: 249 ETNYKE---VSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPT 305
+ + +Y QM+ AG+ PD + A++ AY + R +A+ EEM G+
Sbjct: 193 LVQSGDPGMAAMVYGQMRIAGVLPDEFTVAIMAKAYCRDGRVAQAVEFVEEMEGMGLEVN 252
Query: 306 HKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFR 365
AY+ ++D + G + AR + + ++R SP++ +YT ++ Y ME AE+ +
Sbjct: 253 LVAYHAVMDCYCGMGWTEDARRILESLQRKGLSPNVVTYTLLVKGYCKDGRMEEAERVVK 312
Query: 366 RLKQDG-FVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKN 424
+K+ G V + + YG +I GY + ++ + ++MR GI N ++ T+++ K
Sbjct: 313 EMKETGDIVVDEVAYGMMINGYCQRGRMDDATRVRNEMRDAGIHVNLFVYNTMINGLCKL 372
Query: 425 KDFDSAVVWYKEMESCGFPPDQKAKNILL 453
+ +EME G PD+ + N L+
Sbjct: 373 GRMEEVQKVLQEMEDVGMRPDKYSYNTLI 401
>gi|115471383|ref|NP_001059290.1| Os07g0249100 [Oryza sativa Japonica Group]
gi|33146978|dbj|BAC80051.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|50508482|dbj|BAD30659.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113610826|dbj|BAF21204.1| Os07g0249100 [Oryza sativa Japonica Group]
gi|215767773|dbj|BAH00002.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 882
Score = 142 bits (357), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 101/429 (23%), Positives = 207/429 (48%), Gaps = 16/429 (3%)
Query: 44 AVAVLRSERTRGQPLPKDLVLGTLVRLKQLKKWNVVSEVLEWLRI--QSWWDFNEMDFLM 101
AVAV+R + R +++G L ++ ++ LE LR + ++ F
Sbjct: 166 AVAVMRRLKFRPAFSAYTVLIGALAEARRPER------ALELLRQMQEVGYEVGVHLFTT 219
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
L+ A ++G A ++ + P +V + ++ +G+ G A F +++ G
Sbjct: 220 LVRALAREGQVADALALVDEVKGSCLEPDIVLYNVCIDCFGKAGNVDMAWKFFHELKAQG 279
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
+P ++Y ++ + +A + EAEE+F + + E+S P ++ MI Y AG +E
Sbjct: 280 LKPDDVSYTSMIWVLCKAGRLGEAEELFAQM-EAERS--VPCAYAYNTMIMGYGSAGRFE 336
Query: 222 KARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSK---IYDQMQRAGLQPDVVSYALLI 278
A KL + ERG S V++NS+++ ++V + +++ M++ +P+ +Y ++I
Sbjct: 337 DAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLFEVMKKDA-EPNSSTYNIII 395
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCS 338
+ R EEA + +EM A + P NI++D + +++A +F+ + C+
Sbjct: 396 DMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFESASQRGCN 455
Query: 339 PDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEI 398
PD +Y +++ ++ A + F ++ G N + Y +LI+ + E +I
Sbjct: 456 PDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGRKEDGHKI 515
Query: 399 YDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILL-SLAK 457
+ ++ G KP+ T+ T MD K + + + ++++ S GF PD ++ +IL+ L K
Sbjct: 516 FKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSILIHGLTK 575
Query: 458 TADERNEAN 466
R +N
Sbjct: 576 AGQARETSN 584
Score = 138 bits (348), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 78/328 (23%), Positives = 162/328 (49%), Gaps = 6/328 (1%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + + LI + G K+ + ++G P + M+ + G + IF
Sbjct: 492 NPVVYTSLIRNFFIHGRKEDGHKIFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIF 551
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
++S G P +Y I++ +A + +E +F + ++ D + ++ ++ +
Sbjct: 552 EDIRSYGFLPDVRSYSILIHGLTKAGQARETSNIFHAM---KQQGFALDARAYNAVVDGF 608
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSL---MSFETNYKEVSKIYDQMQRAGLQPDV 271
K+G KA ++ M E+ VQ + TY ++ ++ E ++++ + G++ +V
Sbjct: 609 CKSGKVHKAYEILEEMKEKCVQPTVATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNV 668
Query: 272 VSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKC 331
V Y+ LI+ +GK R +EA + EEM+ G+ P +N LLDA + +++A F+
Sbjct: 669 VLYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLLDALVKAEEINEALVCFQS 728
Query: 332 MRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNN 391
M+ +C P+ +Y+ +++ A F++ +++ G VPNV+TY T+I G AKV N
Sbjct: 729 MKEMKCPPNTYTYSILINGLCRVQKYNKAFVFWQDMQKQGLVPNVVTYTTMISGLAKVGN 788
Query: 392 LEKMMEIYDKMRVNGIKPNQTIFTTIMD 419
+ ++++ + NG P+ F +++
Sbjct: 789 ITDAYSLFERFKANGGIPDAASFNALIE 816
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 96/416 (23%), Positives = 188/416 (45%), Gaps = 8/416 (1%)
Query: 58 LPKDLVLGTLV-RLKQLKKWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAE 116
P L + +V RL + +K ++ E Q + + + + LI GK+G ++A
Sbjct: 420 FPNLLTVNIMVDRLCKARKLEEAYKIFESAS-QRGCNPDCVTYCSLIDGLGKKGQVDEAY 478
Query: 117 KVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLF 176
++ M G+ + V +T+L+ + GR ++ IF+ + G +P +
Sbjct: 479 RLFEKMLDAGHNANPVVYTSLIRNFFIHGRKEDGHKIFKELIRRGCKPDLTLLNTYMDCV 538
Query: 177 VEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQ 236
+A + ++ +F D PD + + ++I+ KAG + +F M ++G
Sbjct: 539 FKAGEVEKGRMIFE---DIRSYGFLPDVRSYSILIHGLTKAGQARETSNIFHAMKQQGFA 595
Query: 237 QSTVTYNSLMSFETNYKEVSKIYD---QMQRAGLQPDVVSYALLINAYGKARREEEALAV 293
YN+++ +V K Y+ +M+ +QP V +Y +++ K R +EA +
Sbjct: 596 LDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTVATYGAIVDGLAKIDRLDEAYML 655
Query: 294 FEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVN 353
FEE G+ Y+ L+D F G +D+A + + M + +P++ ++ ++L A V
Sbjct: 656 FEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLLDALVK 715
Query: 354 ASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTI 413
A ++ A F+ +K+ PN TY LI G +V K + M+ G+ PN
Sbjct: 716 AEEINEALVCFQSMKEMKCPPNTYTYSILINGLCRVQKYNKAFVFWQDMQKQGLVPNVVT 775
Query: 414 FTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELL 469
+TT++ K + A ++ ++ G PD + N L+ A+ EA ++
Sbjct: 776 YTTMISGLAKVGNITDAYSLFERFKANGGIPDAASFNALIEGMSNANRAMEAYQVF 831
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 102/425 (24%), Positives = 178/425 (41%), Gaps = 75/425 (17%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGR------------------ 143
+I YG G F A K+L + ++G PSVVS +++ G+
Sbjct: 325 MIMGYGSAGRFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLFEVMKKDA 384
Query: 144 ----------------GGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEE 187
GGR + A I M+ + P+ LT I++ +A K +EA +
Sbjct: 385 EPNSSTYNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYK 444
Query: 188 VFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSL-- 245
+F + + PD + +I K G ++A +LF M + G + V Y SL
Sbjct: 445 IFES---ASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIR 501
Query: 246 --------------------------MSFETNYK-------EVSK---IYDQMQRAGLQP 269
++ Y EV K I++ ++ G P
Sbjct: 502 NFFIHGRKEDGHKIFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLP 561
Query: 270 DVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVF 329
DV SY++LI+ KA + E +F M G +AYN ++D F SG V +A +
Sbjct: 562 DVRSYSILIHGLTKAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEIL 621
Query: 330 KCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKV 389
+ M+ P + +Y ++ ++ A F K G NV+ Y +LI G+ KV
Sbjct: 622 EEMKEKCVQPTVATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKV 681
Query: 390 NNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAK 449
+++ I ++M G+ PN + +++DA K ++ + A+V ++ M+ PP+
Sbjct: 682 GRIDEAYLILEEMMKKGLTPNVYTWNSLLDALVKAEEINEALVCFQSMKEMKCPPNTYTY 741
Query: 450 NILLS 454
+IL++
Sbjct: 742 SILIN 746
Score = 99.0 bits (245), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 107/229 (46%), Gaps = 1/229 (0%)
Query: 261 QMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISG 320
QMQ G + V + L+ A + + +ALA+ +E+ + + P YN+ +D F +G
Sbjct: 204 QMQEVGYEVGVHLFTTLVRALAREGQVADALALVDEVKGSCLEPDIVLYNVCIDCFGKAG 263
Query: 321 MVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYG 380
VD A F ++ PD SYT+M+ A + AE+ F +++ + VP Y
Sbjct: 264 NVDMAWKFFHELKAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYN 323
Query: 381 TLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESC 440
T+I GY E ++ +++R G P+ F +I+ GK + D A+ ++ M+
Sbjct: 324 TMIMGYGSAGRFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLFEVMKK- 382
Query: 441 GFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGINGLSISVD 489
P+ NI++ + EA +L H + P + ++I VD
Sbjct: 383 DAEPNSSTYNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVD 431
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 84/372 (22%), Positives = 159/372 (42%), Gaps = 42/372 (11%)
Query: 111 DFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAE---AIFRRMQSSGPRPSAL 167
D EKVL M GY + L A R R +A A+ RR++ RP+
Sbjct: 124 DLAALEKVLEEMAVLGYGLPNQACAHLAAALVRARRLDDAVLAVAVMRRLKF---RPAFS 180
Query: 168 TYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLF 227
Y +++ EA + + A E+ L+ Q++ GYE LF
Sbjct: 181 AYTVLIGALAEARRPERALEL-----------LRQMQEV------------GYEVGVHLF 217
Query: 228 ALMAERGVQQSTVTYNSLMSFETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARRE 287
T ++ E + + D+++ + L+PD+V Y + I+ +GKA
Sbjct: 218 ------------TTLVRALAREGQVADALALVDEVKGSCLEPDIVLYNVCIDCFGKAGNV 265
Query: 288 EEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTM 347
+ A F E+ G++P +Y ++ +G + +A +F M +R P +Y TM
Sbjct: 266 DMAWKFFHELKAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTM 325
Query: 348 LSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGI 407
+ Y +A E A K RL++ G +P+V+++ +++ K +++ + +++ M+ +
Sbjct: 326 IMGYGSAGRFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLFEVMKKDA- 384
Query: 408 KPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANE 467
+PN + + I+D + A EME P+ NI++ A + EA +
Sbjct: 385 EPNSSTYNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYK 444
Query: 468 LLGNFNHPNNEP 479
+ + + P
Sbjct: 445 IFESASQRGCNP 456
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 98/212 (46%), Gaps = 6/212 (2%)
Query: 125 KGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKE 184
KG +VV +++L++ +G+ GR A I M G P+ T+ +L V+A + E
Sbjct: 662 KGIELNVVLYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLLDALVKAEEINE 721
Query: 185 AEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNS 244
A F ++ E K P P+ + ++I + Y KA + M ++G+ + VTY +
Sbjct: 722 ALVCFQSM-KEMKCP--PNTYTYSILINGLCRVQKYNKAFVFWQDMQKQGLVPNVVTYTT 778
Query: 245 LMSFETNYKEVSKIYDQMQR---AGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAG 301
++S ++ Y +R G PD S+ LI A R EA VFEE G
Sbjct: 779 MISGLAKVGNITDAYSLFERFKANGGIPDAASFNALIEGMSNANRAMEAYQVFEETRLRG 838
Query: 302 VRPTHKAYNILLDAFAISGMVDQARTVFKCMR 333
R K+ LLDA S ++QA V +R
Sbjct: 839 CRINIKSCISLLDALNKSECLEQAAIVGAVLR 870
>gi|359482557|ref|XP_002277683.2| PREDICTED: pentatricopeptide repeat-containing protein At5g39710
[Vitis vinifera]
Length = 990
Score = 141 bits (356), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 83/371 (22%), Positives = 178/371 (47%), Gaps = 9/371 (2%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
+E + ++I GK G +++ + M +KGY P+++++ +++A +F
Sbjct: 111 DEYTYTIMIRMTGKIGKADESLTLFQEMTEKGYTPNLIAYNTMIQALANNRMVDKTIFLF 170
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
+M + RP+ T+ +IL + V + +EV E S ++ ++ ++
Sbjct: 171 SKMVENNCRPNGFTFSVILNVLVAEGQLGRLDEVV------EVSNKFMNKSIYAYLVRTL 224
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSKIYDQMQRAG---LQPDV 271
K G +A +LF M + Y S++ + + ++ D + + + D
Sbjct: 225 SKLGHASEAHRLFCNMWSFHDEGDRDAYMSMLESLCDAGKTTEALDLLSKIHEKRISTDT 284
Query: 272 VSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKC 331
V Y +++A GK ++ + ++E+M G P +YNIL+ +F +G V++A +F+
Sbjct: 285 VMYNTVLSALGKLKKTSDLHDLYEKMKQDGPSPDIFSYNILISSFGRAGRVEEAVKIFEE 344
Query: 332 MRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNN 391
+ C PDI S+ ++++ D++ A F+ ++++G P+V+TY TLI+ + K +
Sbjct: 345 LENSSCKPDIISFNSLINCLGKNGDIDEAHMRFKEMREEGLSPDVVTYSTLIECFGKTDK 404
Query: 392 LEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNI 451
+E ++D+M G PN + ++D ++ AV Y +++ G PD +
Sbjct: 405 VEMACRLFDEMLAEGCSPNIVTYNILLDCLERSGRTAEAVDLYAKLKQQGLTPDSITYAV 464
Query: 452 LLSLAKTADER 462
L L + ++
Sbjct: 465 LERLQSGSHQK 475
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 92/424 (21%), Positives = 183/424 (43%), Gaps = 41/424 (9%)
Query: 101 MLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSS 160
+LI +G D E+ + K + ++ L++A+ R A ++ ++
Sbjct: 15 ILIGIFGGGAD---VERCFDLVKKWDLQMNCYTYKCLLQAHLRSNNSNKAFEVYVELRRR 71
Query: 161 GPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGY 220
G + Y ++L + NK ++V+M D ++ +PD+ + +MI M K G
Sbjct: 72 GYKLDIFAYNMLLDALAKDNK---VDQVYMVFKDMKRKHCEPDEYTYTIMIRMTGKIGKA 128
Query: 221 EKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSK---IYDQMQRAGLQPDVVSYALL 277
+++ LF M E+G + + YN+++ N + V K ++ +M +P+ +++++
Sbjct: 129 DESLTLFQEMTEKGYTPNLIAYNTMIQALANNRMVDKTIFLFSKMVENNCRPNGFTFSVI 188
Query: 278 IN---AYGKARREEEALAVFEEMLDAG-----VRPTHK---------------------- 307
+N A G+ R +E + V + ++ VR K
Sbjct: 189 LNVLVAEGQLGRLDEVVEVSNKFMNKSIYAYLVRTLSKLGHASEAHRLFCNMWSFHDEGD 248
Query: 308 --AYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFR 365
AY +L++ +G +A + + R S D Y T+LSA +
Sbjct: 249 RDAYMSMLESLCDAGKTTEALDLLSKIHEKRISTDTVMYNTVLSALGKLKKTSDLHDLYE 308
Query: 366 RLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNK 425
++KQDG P++ +Y LI + + +E+ ++I++++ + KP+ F ++++ GKN
Sbjct: 309 KMKQDGPSPDIFSYNILISSFGRAGRVEEAVKIFEELENSSCKPDIISFNSLINCLGKNG 368
Query: 426 DFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGINGLS 485
D D A + +KEM G PD + L+ D+ A L P I +
Sbjct: 369 DIDEAHMRFKEMREEGLSPDVVTYSTLIECFGKTDKVEMACRLFDEMLAEGCSPNIVTYN 428
Query: 486 ISVD 489
I +D
Sbjct: 429 ILLD 432
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 57/191 (29%), Positives = 97/191 (50%)
Query: 230 MAERGVQQSTVTYNSLMSFETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEE 289
M GV+ S T N L+ +V + +D +++ LQ + +Y L+ A+ ++ +
Sbjct: 1 MERCGVRGSISTINILIGIFGGGADVERCFDLVKKWDLQMNCYTYKCLLQAHLRSNNSNK 60
Query: 290 ALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLS 349
A V+ E+ G + AYN+LLDA A VDQ VFK M+R C PD +YT M+
Sbjct: 61 AFEVYVELRRRGYKLDIFAYNMLLDALAKDNKVDQVYMVFKDMKRKHCEPDEYTYTIMIR 120
Query: 350 AYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKP 409
+ + F+ + + G+ PN+I Y T+I+ A ++K + ++ KM N +P
Sbjct: 121 MTGKIGKADESLTLFQEMTEKGYTPNLIAYNTMIQALANNRMVDKTIFLFSKMVENNCRP 180
Query: 410 NQTIFTTIMDA 420
N F+ I++
Sbjct: 181 NGFTFSVILNV 191
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 79/378 (20%), Positives = 159/378 (42%), Gaps = 41/378 (10%)
Query: 157 MQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKK 216
M+ G R S T I++ +F + E F + +K L+ + + ++ + +
Sbjct: 1 MERCGVRGSISTINILIGIF---GGGADVERCFDLV---KKWDLQMNCYTYKCLLQAHLR 54
Query: 217 AGGYEKARKLFALMAERGVQQSTVTYNSLM---SFETNYKEVSKIYDQMQRAGLQPDVVS 273
+ KA +++ + RG + YN L+ + + +V ++ M+R +PD +
Sbjct: 55 SNNSNKAFEVYVELRRRGYKLDIFAYNMLLDALAKDNKVDQVYMVFKDMKRKHCEPDEYT 114
Query: 274 YALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMR 333
Y ++I GK + +E+L +F+EM + G P AYN ++ A A + MVD+ +F M
Sbjct: 115 YTIMIRMTGKIGKADESLTLFQEMTEKGYTPNLIAYNTMIQALANNRMVDKTIFLFSKMV 174
Query: 334 RDRCSPDICSYTTMLSAYVNASDM-------EGAEKFF---------RRLKQDGFVPNVI 377
+ C P+ +++ +L+ V + E + KF R L + G
Sbjct: 175 ENNCRPNGFTFSVILNVLVAEGQLGRLDEVVEVSNKFMNKSIYAYLVRTLSKLGHASEAH 234
Query: 378 ----------------TYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAY 421
Y ++++ + +++ K+ I + ++ T++ A
Sbjct: 235 RLFCNMWSFHDEGDRDAYMSMLESLCDAGKTTEALDLLSKIHEKRISTDTVMYNTVLSAL 294
Query: 422 GKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGI 481
GK K Y++M+ G PD + NIL+S A EA ++ + + +P I
Sbjct: 295 GKLKKTSDLHDLYEKMKQDGPSPDIFSYNILISSFGRAGRVEEAVKIFEELENSSCKPDI 354
Query: 482 NGLSISVDEEDDDDDDDE 499
+ ++ + D DE
Sbjct: 355 ISFNSLINCLGKNGDIDE 372
>gi|359480144|ref|XP_002269420.2| PREDICTED: pentatricopeptide repeat-containing protein At5g48730,
chloroplastic-like [Vitis vinifera]
gi|297744374|emb|CBI37344.3| unnamed protein product [Vitis vinifera]
Length = 497
Score = 141 bits (356), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 95/369 (25%), Positives = 185/369 (50%), Gaps = 9/369 (2%)
Query: 58 LPKDLVLGTLVRLKQLKKWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEK 117
LP+ ++ R+ L+ W +V E LR Q W+ N ++ LI GK KA
Sbjct: 101 LPRTVLEALHERITALR-WESALKVFELLREQLWYRPNSGIYIKLIVMLGKCKQPEKAHA 159
Query: 118 VLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG-PRPSALTYQIILKLF 176
+ M +G + ++TAL+ AY R G + A ++ +M+++ +P TY +++K
Sbjct: 160 LFLAMIDEGCVVNHEAYTALLSAYSRSGLFDKAFSLLEKMKNTPDCQPDVHTYSVLIKSC 219
Query: 177 VEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGY-EKARKLFALMAERGV 235
++ F ++V + L D +KP+ ++ +I Y KA + E L ++ E
Sbjct: 220 LQVVAF---DKVPVLLSDMANQGIKPNTVTYNTLIDAYGKAKRFAEMESTLLEMLREGKC 276
Query: 236 QQSTVTYNS-LMSFETN--YKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALA 292
+ T NS L +F ++ + + K Y++ Q AG++P++ ++ +L+++YGKA + E+ A
Sbjct: 277 EPDVWTMNSTLRAFGSSGQIETMEKCYEKFQSAGIEPNIKTFNILLDSYGKAEKYEKMSA 336
Query: 293 VFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYV 352
V E M T YN+++DAF +G + Q +F+ MR +R P + +++ AY
Sbjct: 337 VMEYMQKYHFSWTIVTYNVVIDAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYG 396
Query: 353 NASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQT 412
A E R ++ + +++ + L+ Y ++ +M + + M+ G KP++
Sbjct: 397 RAGKAEKIGGVLRFIENSDVMLDIVFFNCLVDAYGRLGCFAEMKGVLEMMKKKGCKPDKI 456
Query: 413 IFTTIMDAY 421
+ T++ AY
Sbjct: 457 TYRTMIKAY 465
Score = 41.6 bits (96), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 52/100 (52%), Gaps = 6/100 (6%)
Query: 47 VLRSERTRGQPLPKDLVLGTLVR-LKQLKKWNVVSEVLEWLRIQSWWDFNEMDFLMLITA 105
++RSER + P + L +LVR + K + VL ++ S + + F L+ A
Sbjct: 375 LMRSERIK----PSCVTLCSLVRAYGRAGKAEKIGGVLRFIE-NSDVMLDIVFFNCLVDA 429
Query: 106 YGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGG 145
YG+ G F + + VL M KKG P +++ +++AY GG
Sbjct: 430 YGRLGCFAEMKGVLEMMKKKGCKPDKITYRTMIKAYKIGG 469
>gi|8778269|gb|AAF79278.1|AC068602_1 F14D16.2 [Arabidopsis thaliana]
Length = 977
Score = 141 bits (356), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 84/317 (26%), Positives = 152/317 (47%), Gaps = 6/317 (1%)
Query: 70 LKQLKKWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAP 129
LKQ+ + WL+ Q + + + ++ G+ F K+L M + G P
Sbjct: 455 LKQMNDYGNALGFFYWLKRQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQP 514
Query: 130 SVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVF 189
+ V++ L+ +YGR A +F +MQ +G +P +TY ++ + +A A +++
Sbjct: 515 NTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMY 574
Query: 190 MTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFE 249
+ + L PD + ++I KAG A KLF M ++G + VTYN +M
Sbjct: 575 QRM---QAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLH 631
Query: 250 T---NYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTH 306
NY+ K+Y MQ AG +PD V+Y++++ G EEA AVF EM P
Sbjct: 632 AKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDE 691
Query: 307 KAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRR 366
Y +L+D + +G V++A ++ M P++ + ++LS ++ + + A + +
Sbjct: 692 PVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQN 751
Query: 367 LKQDGFVPNVITYGTLI 383
+ G P++ TY L+
Sbjct: 752 MLALGLRPSLQTYTLLL 768
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 88/329 (26%), Positives = 158/329 (48%), Gaps = 8/329 (2%)
Query: 146 RYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQK 205
R++ A +Q+ G R A +LK + N + A F L + + K D
Sbjct: 428 RFRWGPAAEEALQNLGLRIDAYQANQVLK---QMNDYGNALGFFYWL--KRQPGFKHDGH 482
Query: 206 MFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSF--ETNY-KEVSKIYDQM 262
+ M+ +A + KL M G Q +TVTYN L+ NY E +++QM
Sbjct: 483 TYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQM 542
Query: 263 QRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMV 322
Q AG +PD V+Y LI+ + KA + A+ +++ M G+ P Y+++++ +G +
Sbjct: 543 QEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHL 602
Query: 323 DQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTL 382
A +F M C+P++ +Y M+ + A + + A K +R ++ GF P+ +TY +
Sbjct: 603 PAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIV 662
Query: 383 IKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGF 442
++ LE+ ++ +M+ P++ ++ ++D +GK + + A WY+ M G
Sbjct: 663 MEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGL 722
Query: 443 PPDQKAKNILLSLAKTADERNEANELLGN 471
P+ N LLS ++ EA ELL N
Sbjct: 723 RPNVPTCNSLLSTFLRVNKIAEAYELLQN 751
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 86/339 (25%), Positives = 157/339 (46%), Gaps = 16/339 (4%)
Query: 147 YKNAEAIFRRMQ-SSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEE-KSPLKPDQ 204
Y NA F ++ G + TY ++ A +F + LLDE + +P+
Sbjct: 461 YGNALGFFYWLKRQPGFKHDGHTYTTMVGNLGRAKQFGAINK----LLDEMVRDGCQPNT 516
Query: 205 KMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSF--ETNYKEVS-KIYDQ 261
++ +I+ Y +A +A +F M E G + VTY +L+ + + +++ +Y +
Sbjct: 517 VTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQR 576
Query: 262 MQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGM 321
MQ GL PD +Y+++IN GKA A +F EM+D G P YNI++D A +
Sbjct: 577 MQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARN 636
Query: 322 VDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGT 381
A +++ M+ PD +Y+ ++ + +E AE F ++Q ++P+ YG
Sbjct: 637 YQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGL 696
Query: 382 LIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCG 441
L+ + K N+EK + Y M G++PN +++ + + A + M + G
Sbjct: 697 LVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALG 756
Query: 442 FPPDQKAKNILLSLAKTADERNE-----ANELLGNFNHP 475
P + +LLS D R++ +L+ + HP
Sbjct: 757 LRPSLQTYTLLLSCC--TDGRSKLDMGFCGQLMASTGHP 793
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 67/259 (25%), Positives = 128/259 (49%), Gaps = 3/259 (1%)
Query: 226 LFALMAERGVQQSTVTYNSL---MSFETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYG 282
+ L + G + TY ++ + + ++K+ D+M R G QP+ V+Y LI++YG
Sbjct: 468 FYWLKRQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYG 527
Query: 283 KARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDIC 342
+A EA+ VF +M +AG +P Y L+D A +G +D A +++ M+ SPD
Sbjct: 528 RANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTF 587
Query: 343 SYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKM 402
+Y+ +++ A + A K F + G PN++TY ++ +AK N + +++Y M
Sbjct: 588 TYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDM 647
Query: 403 RVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADER 462
+ G +P++ ++ +M+ G + A + EM+ + PD+ +L+ L A
Sbjct: 648 QNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNV 707
Query: 463 NEANELLGNFNHPNNEPGI 481
+A + H P +
Sbjct: 708 EKAWQWYQAMLHAGLRPNV 726
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 78/291 (26%), Positives = 145/291 (49%), Gaps = 10/291 (3%)
Query: 63 VLGTLVRLKQLKKWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFM 122
++G L R KQ + ++++L+ + ++ N + + LI +YG+ N+A V + M
Sbjct: 487 MVGNLGRAKQ---FGAINKLLDEM-VRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQM 542
Query: 123 NKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKF 182
+ G P V++ L++ + + G A +++RMQ+ G P TY +I+ +A
Sbjct: 543 QEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHL 602
Query: 183 KEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTY 242
A ++F ++D+ P+ +++M+ ++ KA Y+ A KL+ M G + VTY
Sbjct: 603 PAAHKLFCEMVDQG---CTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTY 659
Query: 243 NSLMSF--ETNY-KEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLD 299
+ +M Y +E ++ +MQ+ PD Y LL++ +GKA E+A ++ ML
Sbjct: 660 SIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLH 719
Query: 300 AGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSA 350
AG+RP N LL F + +A + + M P + +YT +LS
Sbjct: 720 AGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYTLLLSC 770
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 116/218 (53%), Gaps = 10/218 (4%)
Query: 99 FLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQ 158
+ ++I GK G A K+ M +G P++V++ +M+ + + Y+NA ++R MQ
Sbjct: 589 YSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQ 648
Query: 159 SSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAG 218
++G P +TY I++++ +EAE VF + ++K+ + PD+ ++ +++ ++ KAG
Sbjct: 649 NAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEM--QQKNWI-PDEPVYGLLVDLWGKAG 705
Query: 219 GYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSKIYDQMQRA---GLQPDVVSYA 275
EKA + + M G++ + T NSL+S ++++ Y+ +Q GL+P + +Y
Sbjct: 706 NVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYT 765
Query: 276 LLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILL 313
LL++ R + + + M G H A+ LL
Sbjct: 766 LLLSCCTDGRSKLDMGFCGQLMASTG----HPAHMFLL 799
>gi|334182677|ref|NP_001185030.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332191659|gb|AEE29780.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 886
Score = 141 bits (356), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 84/317 (26%), Positives = 152/317 (47%), Gaps = 6/317 (1%)
Query: 70 LKQLKKWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAP 129
LKQ+ + WL+ Q + + + ++ G+ F K+L M + G P
Sbjct: 338 LKQMNDYGNALGFFYWLKRQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQP 397
Query: 130 SVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVF 189
+ V++ L+ +YGR A +F +MQ +G +P +TY ++ + +A A +++
Sbjct: 398 NTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMY 457
Query: 190 MTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFE 249
+ + L PD + ++I KAG A KLF M ++G + VTYN +M
Sbjct: 458 QRM---QAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLH 514
Query: 250 T---NYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTH 306
NY+ K+Y MQ AG +PD V+Y++++ G EEA AVF EM P
Sbjct: 515 AKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDE 574
Query: 307 KAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRR 366
Y +L+D + +G V++A ++ M P++ + ++LS ++ + + A + +
Sbjct: 575 PVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQN 634
Query: 367 LKQDGFVPNVITYGTLI 383
+ G P++ TY L+
Sbjct: 635 MLALGLRPSLQTYTLLL 651
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 88/330 (26%), Positives = 158/330 (47%), Gaps = 8/330 (2%)
Query: 146 RYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQK 205
R++ A +Q+ G R A +LK + N + A F L + + K D
Sbjct: 311 RFRWGPAAEEALQNLGLRIDAYQANQVLK---QMNDYGNALGFFYWL--KRQPGFKHDGH 365
Query: 206 MFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSF--ETNY-KEVSKIYDQM 262
+ M+ +A + KL M G Q +TVTYN L+ NY E +++QM
Sbjct: 366 TYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQM 425
Query: 263 QRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMV 322
Q AG +PD V+Y LI+ + KA + A+ +++ M G+ P Y+++++ +G +
Sbjct: 426 QEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHL 485
Query: 323 DQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTL 382
A +F M C+P++ +Y M+ + A + + A K +R ++ GF P+ +TY +
Sbjct: 486 PAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIV 545
Query: 383 IKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGF 442
++ LE+ ++ +M+ P++ ++ ++D +GK + + A WY+ M G
Sbjct: 546 MEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGL 605
Query: 443 PPDQKAKNILLSLAKTADERNEANELLGNF 472
P+ N LLS ++ EA ELL N
Sbjct: 606 RPNVPTCNSLLSTFLRVNKIAEAYELLQNM 635
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 86/339 (25%), Positives = 157/339 (46%), Gaps = 16/339 (4%)
Query: 147 YKNAEAIFRRMQ-SSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDE-EKSPLKPDQ 204
Y NA F ++ G + TY ++ A +F + LLDE + +P+
Sbjct: 344 YGNALGFFYWLKRQPGFKHDGHTYTTMVGNLGRAKQFGAINK----LLDEMVRDGCQPNT 399
Query: 205 KMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSF--ETNYKEVS-KIYDQ 261
++ +I+ Y +A +A +F M E G + VTY +L+ + + +++ +Y +
Sbjct: 400 VTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQR 459
Query: 262 MQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGM 321
MQ GL PD +Y+++IN GKA A +F EM+D G P YNI++D A +
Sbjct: 460 MQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARN 519
Query: 322 VDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGT 381
A +++ M+ PD +Y+ ++ + +E AE F ++Q ++P+ YG
Sbjct: 520 YQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGL 579
Query: 382 LIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCG 441
L+ + K N+EK + Y M G++PN +++ + + A + M + G
Sbjct: 580 LVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALG 639
Query: 442 FPPDQKAKNILLSLAKTADERNE-----ANELLGNFNHP 475
P + +LLS D R++ +L+ + HP
Sbjct: 640 LRPSLQTYTLLLSCC--TDGRSKLDMGFCGQLMASTGHP 676
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 78/291 (26%), Positives = 145/291 (49%), Gaps = 10/291 (3%)
Query: 63 VLGTLVRLKQLKKWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFM 122
++G L R KQ + ++++L+ + ++ N + + LI +YG+ N+A V + M
Sbjct: 370 MVGNLGRAKQ---FGAINKLLDEM-VRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQM 425
Query: 123 NKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKF 182
+ G P V++ L++ + + G A +++RMQ+ G P TY +I+ +A
Sbjct: 426 QEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHL 485
Query: 183 KEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTY 242
A ++F ++D+ P+ +++M+ ++ KA Y+ A KL+ M G + VTY
Sbjct: 486 PAAHKLFCEMVDQG---CTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTY 542
Query: 243 NSLMSF--ETNY-KEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLD 299
+ +M Y +E ++ +MQ+ PD Y LL++ +GKA E+A ++ ML
Sbjct: 543 SIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLH 602
Query: 300 AGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSA 350
AG+RP N LL F + +A + + M P + +YT +LS
Sbjct: 603 AGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYTLLLSC 653
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 116/218 (53%), Gaps = 10/218 (4%)
Query: 99 FLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQ 158
+ ++I GK G A K+ M +G P++V++ +M+ + + Y+NA ++R MQ
Sbjct: 472 YSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQ 531
Query: 159 SSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAG 218
++G P +TY I++++ +EAE VF + ++K+ + PD+ ++ +++ ++ KAG
Sbjct: 532 NAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEM--QQKNWI-PDEPVYGLLVDLWGKAG 588
Query: 219 GYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSKIYDQMQRA---GLQPDVVSYA 275
EKA + + M G++ + T NSL+S ++++ Y+ +Q GL+P + +Y
Sbjct: 589 NVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYT 648
Query: 276 LLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILL 313
LL++ R + + + M G H A+ LL
Sbjct: 649 LLLSCCTDGRSKLDMGFCGQLMASTG----HPAHMFLL 682
>gi|297807691|ref|XP_002871729.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297317566|gb|EFH47988.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 504
Score = 141 bits (356), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 103/433 (23%), Positives = 185/433 (42%), Gaps = 43/433 (9%)
Query: 53 TRGQPLPKDLVLGTLVR-LKQLKKWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGD 111
+ +PLP L+ + ++KK++VV + E +++ N +L+ + +
Sbjct: 73 VQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGI-PHNLCTCNILLNCFCRCSQ 131
Query: 112 FNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQI 171
+ A L M K G+ P +V+ +L+ + RG R +A +F RM G P+ + Y
Sbjct: 132 LSLALSFLGKMMKLGHEPDIVTFGSLLNGFCRGDRIYDALYMFDRMVEMGYEPNVVIYNT 191
Query: 172 ILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMA 231
I+ ++ + + A L M
Sbjct: 192 IIDGLCKSKQV--------------------------------------DNALDLLNRME 213
Query: 232 ERGVQQSTVTYNSLMSFETN---YKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREE 288
G++ VTYNSL+S N + + +++ M + + PDV ++ LI+A K R
Sbjct: 214 VDGIRPDAVTYNSLISGLCNSGRWDDATRMVSCMTKREIYPDVFTFNALIDACVKEGRIS 273
Query: 289 EALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTML 348
EA ++EEM+ + P Y++L+ + +D+A +F M C PD+ +Y+ ++
Sbjct: 274 EAEELYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEQMFGFMVSKGCFPDVVTYSILI 333
Query: 349 SAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIK 408
+ Y + +E K F + Q G V N +TY LI+GY + L EI+ M G+
Sbjct: 334 NGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTVLIQGYCRAGKLNVAEEIFKWMVFCGVP 393
Query: 409 PNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANEL 468
PN + ++ N + A+V +M+ G D NI++ A E +A +L
Sbjct: 394 PNIITYNVLLHGLCDNGKIEKALVILADMQKSGMDADIVTYNIIIRGMCKAGEVADAWDL 453
Query: 469 LGNFNHPNNEPGI 481
+ N P I
Sbjct: 454 YCSLNLKGLTPDI 466
Score = 131 bits (330), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 80/328 (24%), Positives = 155/328 (47%), Gaps = 6/328 (1%)
Query: 122 MNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANK 181
M + GY P+VV + +++ + + NA + RM+ G RP A+TY ++ + +
Sbjct: 177 MVEMGYEPNVVIYNTIIDGLCKSKQVDNALDLLNRMEVDGIRPDAVTYNSLISGLCNSGR 236
Query: 182 FKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVT 241
+ +A + + E + PD F+ +I K G +A +L+ M R + VT
Sbjct: 237 WDDATRMVSCMTKRE---IYPDVFTFNALIDACVKEGRISEAEELYEEMIRRSLDPDIVT 293
Query: 242 YNSL---MSFETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEML 298
Y+ L + + E +++ M G PDVV+Y++LIN Y K+++ E + +F EM
Sbjct: 294 YSLLIYGLCMYSRLDEAEQMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMS 353
Query: 299 DAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDME 358
GV Y +L+ + +G ++ A +FK M P+I +Y +L + +E
Sbjct: 354 QRGVVRNTVTYTVLIQGYCRAGKLNVAEEIFKWMVFCGVPPNIITYNVLLHGLCDNGKIE 413
Query: 359 GAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIM 418
A +++ G +++TY +I+G K + ++Y + + G+ P+ +T +M
Sbjct: 414 KALVILADMQKSGMDADIVTYNIIIRGMCKAGEVADAWDLYCSLNLKGLTPDIWTYTAMM 473
Query: 419 DAYGKNKDFDSAVVWYKEMESCGFPPDQ 446
K A +++M+ G P++
Sbjct: 474 LGLYKKGLRGEADALFRKMKEDGILPNE 501
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/247 (24%), Positives = 118/247 (47%), Gaps = 6/247 (2%)
Query: 99 FLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQ 158
F LI A K+G ++AE++ M ++ P +V+++ L+ R AE +F M
Sbjct: 259 FNALIDACVKEGRISEAEELYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEQMFGFMV 318
Query: 159 SSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAG 218
S G P +TY I++ + ++ K + ++F + + + + + ++I Y +AG
Sbjct: 319 SKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEM---SQRGVVRNTVTYTVLIQGYCRAG 375
Query: 219 GYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSK---IYDQMQRAGLQPDVVSYA 275
A ++F M GV + +TYN L+ + ++ K I MQ++G+ D+V+Y
Sbjct: 376 KLNVAEEIFKWMVFCGVPPNIITYNVLLHGLCDNGKIEKALVILADMQKSGMDADIVTYN 435
Query: 276 LLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRD 335
++I KA +A ++ + G+ P Y ++ G+ +A +F+ M+ D
Sbjct: 436 IIIRGMCKAGEVADAWDLYCSLNLKGLTPDIWTYTAMMLGLYKKGLRGEADALFRKMKED 495
Query: 336 RCSPDIC 342
P+ C
Sbjct: 496 GILPNEC 502
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 50/231 (21%), Positives = 104/231 (45%)
Query: 258 IYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFA 317
++ M + P + ++ L++A K ++ + + ++E+M G+ NILL+ F
Sbjct: 68 LFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCFC 127
Query: 318 ISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVI 377
+ A + M + PDI ++ ++L+ + + A F R+ + G+ PNV+
Sbjct: 128 RCSQLSLALSFLGKMMKLGHEPDIVTFGSLLNGFCRGDRIYDALYMFDRMVEMGYEPNVV 187
Query: 378 TYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEM 437
Y T+I G K ++ +++ ++M V+GI+P+ + +++ + +D A M
Sbjct: 188 IYNTIIDGLCKSKQVDNALDLLNRMEVDGIRPDAVTYNSLISGLCNSGRWDDATRMVSCM 247
Query: 438 ESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGINGLSISV 488
PD N L+ +EA EL + +P I S+ +
Sbjct: 248 TKREIYPDVFTFNALIDACVKEGRISEAEELYEEMIRRSLDPDIVTYSLLI 298
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/202 (21%), Positives = 96/202 (47%)
Query: 288 EEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTM 347
+++L +F M+ P+ ++ LL A + D +++ M+ ++C+ +
Sbjct: 63 DDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNIL 122
Query: 348 LSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGI 407
L+ + S + A F ++ + G P+++T+G+L+ G+ + + + + ++D+M G
Sbjct: 123 LNCFCRCSQLSLALSFLGKMMKLGHEPDIVTFGSLLNGFCRGDRIYDALYMFDRMVEMGY 182
Query: 408 KPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANE 467
+PN I+ TI+D K+K D+A+ ME G PD N L+S + ++A
Sbjct: 183 EPNVVIYNTIIDGLCKSKQVDNALDLLNRMEVDGIRPDAVTYNSLISGLCNSGRWDDATR 242
Query: 468 LLGNFNHPNNEPGINGLSISVD 489
++ P + + +D
Sbjct: 243 MVSCMTKREIYPDVFTFNALID 264
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 71/142 (50%), Gaps = 5/142 (3%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + + +LI Y + G N AE++ +M G P+++++ L+ G+ + A I
Sbjct: 360 NTVTYTVLIQGYCRAGKLNVAEEIFKWMVFCGVPPNIITYNVLLHGLCDNGKIEKALVIL 419
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFH-MMIYM 213
MQ SG +TY II++ +A + +A +++ +L L PD + MM+ +
Sbjct: 420 ADMQKSGMDADIVTYNIIIRGMCKAGEVADAWDLYCSL---NLKGLTPDIWTYTAMMLGL 476
Query: 214 YKKAGGYEKARKLFALMAERGV 235
YKK G +A LF M E G+
Sbjct: 477 YKK-GLRGEADALFRKMKEDGI 497
>gi|15240891|ref|NP_195731.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75174092|sp|Q9LFC5.1|PP360_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g01110
gi|6759434|emb|CAB69839.1| putative protein [Arabidopsis thaliana]
gi|28973740|gb|AAO64186.1| unknown protein [Arabidopsis thaliana]
gi|110736884|dbj|BAF00399.1| hypothetical protein [Arabidopsis thaliana]
gi|332002917|gb|AED90300.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 729
Score = 141 bits (356), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 105/421 (24%), Positives = 187/421 (44%), Gaps = 12/421 (2%)
Query: 37 QIEEVGSAVAVLRSERTRGQPLPKDLVLGTLVRLKQLK-KWNVVSEVLEWLRIQSWWDFN 95
++ E A +LRS+ + ++G+LVR+ ++ W V E+ +S N
Sbjct: 180 KLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVYQEI-----SRSGVGIN 234
Query: 96 EMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFR 155
+++ A K G K LS + +KG P +V++ L+ AY G + A +
Sbjct: 235 VYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAFELMN 294
Query: 156 RMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYK 215
M G P TY ++ + K++ A+EVF +L +S L PD + ++
Sbjct: 295 AMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEML---RSGLSPDSTTYRSLLMEAC 351
Query: 216 KAGGYEKARKLFALMAERGVQQSTVTYNSLMSFET---NYKEVSKIYDQMQRAGLQPDVV 272
K G + K+F+ M R V V ++S+MS T N + ++ ++ AGL PD V
Sbjct: 352 KKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNV 411
Query: 273 SYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCM 332
Y +LI Y + A+ + EML G YN +L M+ +A +F M
Sbjct: 412 IYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEM 471
Query: 333 RRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNL 392
PD + T ++ + +++ A + F+++K+ +V+TY TL+ G+ KV ++
Sbjct: 472 TERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDI 531
Query: 393 EKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNIL 452
+ EI+ M I P ++ +++A A + EM S P N +
Sbjct: 532 DTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSM 591
Query: 453 L 453
+
Sbjct: 592 I 592
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 88/355 (24%), Positives = 168/355 (47%), Gaps = 6/355 (1%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
LI+AY +G +A ++++ M KG++P V ++ ++ + G+Y+ A+ +F M SG
Sbjct: 276 LISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSG 335
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
P + TY+ +L + E E+VF D + PD F M+ ++ ++G +
Sbjct: 336 LSPDSTTYRSLLMEACKKGDVVETEKVFS---DMRSRDVVPDLVCFSSMMSLFTRSGNLD 392
Query: 222 KARKLFALMAERGVQQSTVTYNSLMSFETNYKEVS---KIYDQMQRAGLQPDVVSYALLI 278
KA F + E G+ V Y L+ +S + ++M + G DVV+Y ++
Sbjct: 393 KALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTIL 452
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCS 338
+ K + EA +F EM + + P IL+D G + A +F+ M+ R
Sbjct: 453 HGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIR 512
Query: 339 PDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEI 398
D+ +Y T+L + D++ A++ + + +P I+Y L+ +L + +
Sbjct: 513 LDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRV 572
Query: 399 YDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILL 453
+D+M IKP I +++ Y ++ + + ++M S GF PD + N L+
Sbjct: 573 WDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLI 627
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 87/354 (24%), Positives = 167/354 (47%), Gaps = 8/354 (2%)
Query: 99 FLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQ 158
F +++ + + G+ +KA + + + G P V +T L++ Y R G A + M
Sbjct: 378 FSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEML 437
Query: 159 SSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAG 218
G +TY IL + EA+++F + + L PD ++I + K G
Sbjct: 438 QQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTER---ALFPDSYTLTILIDGHCKLG 494
Query: 219 GYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEV---SKIYDQMQRAGLQPDVVSYA 275
+ A +LF M E+ ++ VTYN+L+ ++ +I+ M + P +SY+
Sbjct: 495 NLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYS 554
Query: 276 LLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRD 335
+L+NA EA V++EM+ ++PT N ++ + SG + + M +
Sbjct: 555 ILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISE 614
Query: 336 RCSPDICSYTTMLSAYVNASDMEGAEKFFRRLK--QDGFVPNVITYGTLIKGYAKVNNLE 393
PD SY T++ +V +M A ++++ Q G VP+V TY +++ G+ + N ++
Sbjct: 615 GFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMK 674
Query: 394 KMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQK 447
+ + KM G+ P+++ +T +++ + + A + EM GF PD K
Sbjct: 675 EAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDEMLQRGFSPDDK 728
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 61/308 (19%), Positives = 145/308 (47%), Gaps = 17/308 (5%)
Query: 163 RPSALTYQIILKLFVEANKFKEAEEVFMTL--------------LDEEKSPLKPDQKMFH 208
+ ++L+ ++ + V + + +A+ + + LD S + +F
Sbjct: 110 KHTSLSLSAMIHILVRSGRLSDAQSCLLRMIRRSGVSRLEIVNSLDSTFSNCGSNDSVFD 169
Query: 209 MMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMS--FETNYKEVS-KIYDQMQRA 265
++I Y +A +A + F L+ +G S N+L+ + E++ +Y ++ R+
Sbjct: 170 LLIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVYQEISRS 229
Query: 266 GLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQA 325
G+ +V + +++NA K + E+ ++ + GV P YN L+ A++ G++++A
Sbjct: 230 GVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEA 289
Query: 326 RTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKG 385
+ M SP + +Y T+++ E A++ F + + G P+ TY +L+
Sbjct: 290 FELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLME 349
Query: 386 YAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPD 445
K ++ + +++ MR + P+ F+++M + ++ + D A++++ ++ G PD
Sbjct: 350 ACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPD 409
Query: 446 QKAKNILL 453
IL+
Sbjct: 410 NVIYTILI 417
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 86/177 (48%), Gaps = 4/177 (2%)
Query: 97 MDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRR 156
+ + +L+ A +G +A +V M K P+V+ ++++ Y R G + E+ +
Sbjct: 551 ISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEK 610
Query: 157 MQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKK 216
M S G P ++Y ++ FV +A + + ++EE+ L PD ++ +++ + +
Sbjct: 611 MISEGFVPDCISYNTLIYGFVREENMSKAFGL-VKKMEEEQGGLVPDVFTYNSILHGFCR 669
Query: 217 AGGYEKARKLFALMAERGVQQSTVTYNSLMS---FETNYKEVSKIYDQMQRAGLQPD 270
++A + M ERGV TY +++ + N E +I+D+M + G PD
Sbjct: 670 QNQMKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDEMLQRGFSPD 726
Score = 44.3 bits (103), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 33/156 (21%), Positives = 62/156 (39%), Gaps = 7/156 (4%)
Query: 337 CSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMM 396
C + + ++ YV A + A + F L+ GF ++ LI ++ +E
Sbjct: 161 CGSNDSVFDLLIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAW 220
Query: 397 EIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLA 456
+Y ++ +G+ N +++A K+ + + +++ G PD N L+S
Sbjct: 221 GVYQEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAY 280
Query: 457 KTADERNEANELLGNFNHPNNEPG-------INGLS 485
+ EA EL+ PG INGL
Sbjct: 281 SSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLC 316
Score = 39.7 bits (91), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 47/245 (19%), Positives = 82/245 (33%), Gaps = 50/245 (20%)
Query: 210 MIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSKIYDQMQRAGLQP 269
MI++ ++G A+ M R NSL S +N ++D
Sbjct: 119 MIHILVRSGRLSDAQSCLLRMIRRSGVSRLEIVNSLDSTFSNCGSNDSVFD--------- 169
Query: 270 DVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVF 329
LLI Y +AR+ EA F + G + A N L+ + G V+ A V+
Sbjct: 170 ------LLIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVY 223
Query: 330 KCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKV 389
+ + + G NV T ++ K
Sbjct: 224 Q-----------------------------------EISRSGVGINVYTLNIMVNALCKD 248
Query: 390 NNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAK 449
+EK+ +++ G+ P+ + T++ AY + A M GF P
Sbjct: 249 GKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTY 308
Query: 450 NILLS 454
N +++
Sbjct: 309 NTVIN 313
>gi|242048026|ref|XP_002461759.1| hypothetical protein SORBIDRAFT_02g007610 [Sorghum bicolor]
gi|241925136|gb|EER98280.1| hypothetical protein SORBIDRAFT_02g007610 [Sorghum bicolor]
Length = 896
Score = 141 bits (356), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 78/328 (23%), Positives = 163/328 (49%), Gaps = 6/328 (1%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + + LI + G K+ MN++G P + M+ + G + AIF
Sbjct: 495 NPVVYTSLIRNFFMHGRKEDGHKIFKEMNRRGCQPDLTLLNTYMDCVFKAGDVEKGRAIF 554
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
++ G P +Y I++ +A + +E +F + ++ D + ++ ++ +
Sbjct: 555 EDIKGYGFLPDVRSYSILIHGLTKAGQARETSSIFHAM---KQQGFALDARAYNAVVDGF 611
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSL---MSFETNYKEVSKIYDQMQRAGLQPDV 271
K+G +KA ++ M + V + TY S+ ++ E ++++ + G++ +V
Sbjct: 612 CKSGKLDKAYEVLEEMKVKRVPPTVATYGSIIDGLAKIDRLDEAYMLFEEAKSKGIELNV 671
Query: 272 VSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKC 331
+ Y+ LI+ +GK R +EA + EEM+ G+ P +N L+DA + +++A F+
Sbjct: 672 IVYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLMDALVKAEEINEALICFQS 731
Query: 332 MRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNN 391
M+ +CSP+ +Y+ +++ A F++ +++ G VPNV+TY T+I G AKV N
Sbjct: 732 MKEMKCSPNTYTYSILINGLCRVQKYNKAFVFWQEMQKQGLVPNVVTYTTMIAGLAKVGN 791
Query: 392 LEKMMEIYDKMRVNGIKPNQTIFTTIMD 419
+ ++++ + NG P+ F +++
Sbjct: 792 ITDACSLFERFKANGGTPDAASFNALIE 819
Score = 138 bits (348), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 116/455 (25%), Positives = 192/455 (42%), Gaps = 55/455 (12%)
Query: 57 PLPKDLVLGTLVRLKQLKKWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAE 116
P DLV LVR ++L V + L+ + + + +LI A + +A
Sbjct: 148 PACADLV-SALVRTRRLDDAERVIAAMRRLKFRPAFS----AYTVLIGAMAEARQPERAL 202
Query: 117 KVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLF 176
++L M + GY V T L+ A R GR + A A+ ++ S P + Y + + F
Sbjct: 203 ELLRQMQEVGYEVGVPLFTTLVRALAREGRVEGALALVDEVKGSCLEPDIVLYNVCIDCF 262
Query: 177 VEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQ 236
+A A + F L + LKPD + MI++ KAG +A +LF M
Sbjct: 263 GKAGNVDMAWKFFHEL---KSQGLKPDDVSYTSMIWVLCKAGRLSEAEELFGQMETERAV 319
Query: 237 QSTVTYNSLM-------SFETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEE 289
YN+++ FE YK + DQ++ G P VVS+ ++ GK R+ +E
Sbjct: 320 PCAYAYNTMIMGYGSAGQFENAYK----LLDQLKERGCIPSVVSFNSILTCLGKKRKVDE 375
Query: 290 ALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLS 349
AL +FE M P YNI++D ++G V++A + M P++ + M+
Sbjct: 376 ALTLFEAM-KKDAEPNSSTYNIIIDMLCMAGKVEEAYMIRDEMEHAGLFPNLLTVNIMVD 434
Query: 350 AYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNL-------EKMME----- 397
A E A + F Q G PN +TY +LI G K N+ E M++
Sbjct: 435 RLCKAKKFEPAYEMFETASQRGCNPNSVTYCSLIDGLGKKGNVDDAYRLFENMLDTGHNA 494
Query: 398 -----------------------IYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWY 434
I+ +M G +P+ T+ T MD K D + +
Sbjct: 495 NPVVYTSLIRNFFMHGRKEDGHKIFKEMNRRGCQPDLTLLNTYMDCVFKAGDVEKGRAIF 554
Query: 435 KEMESCGFPPDQKAKNILLSLAKTADERNEANELL 469
++++ GF PD ++ +IL+ A + E + +
Sbjct: 555 EDIKGYGFLPDVRSYSILIHGLTKAGQARETSSIF 589
Score = 138 bits (347), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 100/423 (23%), Positives = 191/423 (45%), Gaps = 8/423 (1%)
Query: 47 VLRSERTRGQPLPKDLVLGTLV-RLKQLKKWNVVSEVLEWLRIQSWWDFNEMDFLMLITA 105
++R E P L + +V RL + KK+ E+ E Q + N + + LI
Sbjct: 412 MIRDEMEHAGLFPNLLTVNIMVDRLCKAKKFEPAYEMFETAS-QRGCNPNSVTYCSLIDG 470
Query: 106 YGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPS 165
GK+G+ + A ++ M G+ + V +T+L+ + GR ++ IF+ M G +P
Sbjct: 471 LGKKGNVDDAYRLFENMLDTGHNANPVVYTSLIRNFFMHGRKEDGHKIFKEMNRRGCQPD 530
Query: 166 ALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARK 225
+ +A ++ +F D + PD + + ++I+ KAG +
Sbjct: 531 LTLLNTYMDCVFKAGDVEKGRAIFE---DIKGYGFLPDVRSYSILIHGLTKAGQARETSS 587
Query: 226 LFALMAERGVQQSTVTYNSLMSFETNYKEVSKIYD---QMQRAGLQPDVVSYALLINAYG 282
+F M ++G YN+++ ++ K Y+ +M+ + P V +Y +I+
Sbjct: 588 IFHAMKQQGFALDARAYNAVVDGFCKSGKLDKAYEVLEEMKVKRVPPTVATYGSIIDGLA 647
Query: 283 KARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDIC 342
K R +EA +FEE G+ Y+ L+D F G +D+A + + M + +P++
Sbjct: 648 KIDRLDEAYMLFEEAKSKGIELNVIVYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVY 707
Query: 343 SYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKM 402
++ +++ A V A ++ A F+ +K+ PN TY LI G +V K + +M
Sbjct: 708 TWNSLMDALVKAEEINEALICFQSMKEMKCSPNTYTYSILINGLCRVQKYNKAFVFWQEM 767
Query: 403 RVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADER 462
+ G+ PN +TT++ K + A ++ ++ G PD + N L+ A+
Sbjct: 768 QKQGLVPNVVTYTTMIAGLAKVGNITDACSLFERFKANGGTPDAASFNALIEGMSHANRA 827
Query: 463 NEA 465
EA
Sbjct: 828 IEA 830
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 106/436 (24%), Positives = 188/436 (43%), Gaps = 30/436 (6%)
Query: 34 LMNQIEEVGSAV----------AVLRSERTRGQPLPKDLVLGTLVRLKQLKKWNVVSEVL 83
L+ Q++EVG V A+ R R G D V G+ + + +NV +
Sbjct: 204 LLRQMQEVGYEVGVPLFTTLVRALAREGRVEGALALVDEVKGSCLE-PDIVLYNVCIDCF 262
Query: 84 -EWLRIQSWWDF-----------NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSV 131
+ + W F +++ + +I K G ++AE++ M + P
Sbjct: 263 GKAGNVDMAWKFFHELKSQGLKPDDVSYTSMIWVLCKAGRLSEAEELFGQMETERAVPCA 322
Query: 132 VSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMT 191
++ ++ YG G+++NA + +++ G PS +++ IL + K EA +T
Sbjct: 323 YAYNTMIMGYGSAGQFENAYKLLDQLKERGCIPSVVSFNSILTCLGKKRKVDEA----LT 378
Query: 192 LLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETN 251
L + K +P+ ++++I M AG E+A + M G+ + +T N ++
Sbjct: 379 LFEAMKKDAEPNSSTYNIIIDMLCMAGKVEEAYMIRDEMEHAGLFPNLLTVNIMVDRLCK 438
Query: 252 YKEVSKIYDQMQRA---GLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKA 308
K+ Y+ + A G P+ V+Y LI+ GK ++A +FE MLD G
Sbjct: 439 AKKFEPAYEMFETASQRGCNPNSVTYCSLIDGLGKKGNVDDAYRLFENMLDTGHNANPVV 498
Query: 309 YNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLK 368
Y L+ F + G + +FK M R C PD+ T + A D+E F +K
Sbjct: 499 YTSLIRNFFMHGRKEDGHKIFKEMNRRGCQPDLTLLNTYMDCVFKAGDVEKGRAIFEDIK 558
Query: 369 QDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFD 428
GF+P+V +Y LI G K + I+ M+ G + + ++D + K+ D
Sbjct: 559 GYGFLPDVRSYSILIHGLTKAGQARETSSIFHAMKQQGFALDARAYNAVVDGFCKSGKLD 618
Query: 429 SAVVWYKEMESCGFPP 444
A +EM+ PP
Sbjct: 619 KAYEVLEEMKVKRVPP 634
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 107/425 (25%), Positives = 180/425 (42%), Gaps = 75/425 (17%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGR------------------ 143
+I YG G F A K+L + ++G PSVVS +++ G+
Sbjct: 328 MIMGYGSAGQFENAYKLLDQLKERGCIPSVVSFNSILTCLGKKRKVDEALTLFEAMKKDA 387
Query: 144 ----------------GGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEE 187
G+ + A I M+ +G P+ LT I++ +A KF+ A E
Sbjct: 388 EPNSSTYNIIIDMLCMAGKVEEAYMIRDEMEHAGLFPNLLTVNIMVDRLCKAKKFEPAYE 447
Query: 188 VFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMS 247
+F T + P+ + +I K G + A +LF M + G + V Y SL+
Sbjct: 448 MFET---ASQRGCNPNSVTYCSLIDGLGKKGNVDDAYRLFENMLDTGHNANPVVYTSLIR 504
Query: 248 --FETNYKE-VSKIYDQMQRAGLQPD---------------------------------- 270
F KE KI+ +M R G QPD
Sbjct: 505 NFFMHGRKEDGHKIFKEMNRRGCQPDLTLLNTYMDCVFKAGDVEKGRAIFEDIKGYGFLP 564
Query: 271 -VVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVF 329
V SY++LI+ KA + E ++F M G +AYN ++D F SG +D+A V
Sbjct: 565 DVRSYSILIHGLTKAGQARETSSIFHAMKQQGFALDARAYNAVVDGFCKSGKLDKAYEVL 624
Query: 330 KCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKV 389
+ M+ R P + +Y +++ ++ A F K G NVI Y +LI G+ KV
Sbjct: 625 EEMKVKRVPPTVATYGSIIDGLAKIDRLDEAYMLFEEAKSKGIELNVIVYSSLIDGFGKV 684
Query: 390 NNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAK 449
+++ I ++M G+ PN + ++MDA K ++ + A++ ++ M+ P+
Sbjct: 685 GRIDEAYLILEEMMKKGLTPNVYTWNSLMDALVKAEEINEALICFQSMKEMKCSPNTYTY 744
Query: 450 NILLS 454
+IL++
Sbjct: 745 SILIN 749
Score = 103 bits (256), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 62/229 (27%), Positives = 107/229 (46%), Gaps = 1/229 (0%)
Query: 261 QMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISG 320
QMQ G + V + L+ A + R E ALA+ +E+ + + P YN+ +D F +G
Sbjct: 207 QMQEVGYEVGVPLFTTLVRALAREGRVEGALALVDEVKGSCLEPDIVLYNVCIDCFGKAG 266
Query: 321 MVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYG 380
VD A F ++ PD SYT+M+ A + AE+ F +++ + VP Y
Sbjct: 267 NVDMAWKFFHELKSQGLKPDDVSYTSMIWVLCKAGRLSEAEELFGQMETERAVPCAYAYN 326
Query: 381 TLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESC 440
T+I GY E ++ D+++ G P+ F +I+ GK + D A+ ++ M+
Sbjct: 327 TMIMGYGSAGQFENAYKLLDQLKERGCIPSVVSFNSILTCLGKKRKVDEALTLFEAMKK- 385
Query: 441 GFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGINGLSISVD 489
P+ NI++ + A + EA + H P + ++I VD
Sbjct: 386 DAEPNSSTYNIIIDMLCMAGKVEEAYMIRDEMEHAGLFPNLLTVNIMVD 434
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/187 (25%), Positives = 89/187 (47%)
Query: 293 VFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYV 352
V EEM G + A L+ A + +D A V MRR + P +YT ++ A
Sbjct: 134 VLEEMSVLGYGVPNPACADLVSALVRTRRLDDAERVIAAMRRLKFRPAFSAYTVLIGAMA 193
Query: 353 NASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQT 412
A E A + R++++ G+ V + TL++ A+ +E + + D+++ + ++P+
Sbjct: 194 EARQPERALELLRQMQEVGYEVGVPLFTTLVRALAREGRVEGALALVDEVKGSCLEPDIV 253
Query: 413 IFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNF 472
++ +D +GK + D A ++ E++S G PD + ++ + A +EA EL G
Sbjct: 254 LYNVCIDCFGKAGNVDMAWKFFHELKSQGLKPDDVSYTSMIWVLCKAGRLSEAEELFGQM 313
Query: 473 NHPNNEP 479
P
Sbjct: 314 ETERAVP 320
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 98/207 (47%), Gaps = 6/207 (2%)
Query: 125 KGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKE 184
KG +V+ +++L++ +G+ GR A I M G P+ T+ ++ V+A + E
Sbjct: 665 KGIELNVIVYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLMDALVKAEEINE 724
Query: 185 AEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNS 244
A F ++ + + SP + + ++I + Y KA + M ++G+ + VTY +
Sbjct: 725 ALICFQSMKEMKCSP---NTYTYSILINGLCRVQKYNKAFVFWQEMQKQGLVPNVVTYTT 781
Query: 245 LMSFET---NYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAG 301
+++ N + ++++ + G PD S+ LI A R EA VFEE G
Sbjct: 782 MIAGLAKVGNITDACSLFERFKANGGTPDAASFNALIEGMSHANRAIEAYHVFEETRLKG 841
Query: 302 VRPTHKAYNILLDAFAISGMVDQARTV 328
R KA LLDA + ++QA V
Sbjct: 842 CRINVKACISLLDALNKAECLEQAAVV 868
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/242 (21%), Positives = 106/242 (43%), Gaps = 1/242 (0%)
Query: 241 TYNSLMSFETN-YKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLD 299
YN+++ F ++ + K+ ++M G + A L++A + RR ++A V M
Sbjct: 116 AYNAVLPFLSHDLAAMEKVLEEMSVLGYGVPNPACADLVSALVRTRRLDDAERVIAAMRR 175
Query: 300 AGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEG 359
RP AY +L+ A A + ++A + + M+ + +TT++ A +EG
Sbjct: 176 LKFRPAFSAYTVLIGAMAEARQPERALELLRQMQEVGYEVGVPLFTTLVRALAREGRVEG 235
Query: 360 AEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMD 419
A +K P+++ Y I + K N++ + + +++ G+KP+ +T+++
Sbjct: 236 ALALVDEVKGSCLEPDIVLYNVCIDCFGKAGNVDMAWKFFHELKSQGLKPDDVSYTSMIW 295
Query: 420 AYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEP 479
K A + +ME+ P A N ++ +A + A +LL P
Sbjct: 296 VLCKAGRLSEAEELFGQMETERAVPCAYAYNTMIMGYGSAGQFENAYKLLDQLKERGCIP 355
Query: 480 GI 481
+
Sbjct: 356 SV 357
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 49/95 (51%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + +LI + +NKA M K+G P+VV++T ++ + G +A ++F
Sbjct: 740 NTYTYSILINGLCRVQKYNKAFVFWQEMQKQGLVPNVVTYTTMIAGLAKVGNITDACSLF 799
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVF 189
R +++G P A ++ +++ AN+ EA VF
Sbjct: 800 ERFKANGGTPDAASFNALIEGMSHANRAIEAYHVF 834
>gi|413917168|gb|AFW57100.1| hypothetical protein ZEAMMB73_992270 [Zea mays]
Length = 442
Score = 141 bits (356), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 99/413 (23%), Positives = 196/413 (47%), Gaps = 41/413 (9%)
Query: 68 VRLKQLKKWNVVSEVLEWLRIQSWWD--FNEMDFLMLITAYGKQGDFNKAEKVLSFMNKK 125
+ + L + +++ E L LR + W D F + + +LI + + G++N A ++ + M K
Sbjct: 24 ILVTSLVQNSLLEEALYILREKKWKDSAFEDNLYHILICSCKEGGNYNDAVRIYNQMPKS 83
Query: 126 GYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEA 185
P+ +++ + R+ +AE I +++S + Y +I++++++A + K+A
Sbjct: 84 ETHPNPRISCTMIDVFSTMERFADAETILLELKASASVLDMIAYSVIVRMYIKARRLKDA 143
Query: 186 EEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSL 245
V + E++ + PD+ +F M+ Y+K G EK + + + V+ YN +
Sbjct: 144 CSVLAEM--EKQKEIIPDKYLFLDMLRTYQKCGLLEKLADTYYWIRKSQVKCDEAMYNCI 201
Query: 246 MSF---ETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVF-------- 294
++ E+S+I+D+M + G + V++ +L++ YGKA A VF
Sbjct: 202 INCCGRAIPVDELSRIFDEMLQQGHLANTVTFNVLLDIYGKAGLFNRAEKVFIMARKQGL 261
Query: 295 --------------------------EEMLDAGVRPTHKAYNILLDAFAISGMVDQARTV 328
+ M DAG + +AYN +LDA+ +G +++ +V
Sbjct: 262 ADIISYNTIIAAYAKGGNFLSMNYFVQMMQDAGFPVSLEAYNCMLDAYGKAGRLEEFASV 321
Query: 329 FKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAK 388
+ M+R +C D +Y M++ Y ++ LK G P++ +Y TLIK Y
Sbjct: 322 LQKMKRAKCKFDHYTYNIMINIYGRRGWIQDVSNVLAELKDRGVEPDLYSYNTLIKAYGI 381
Query: 389 VNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCG 441
E +++ +MRV GI P++ + ++ A +N++F AV W M+ G
Sbjct: 382 ARMPEDAVKLMQEMRVKGISPDRVTYANLIAALQRNENFLEAVKWSLWMKQTG 434
>gi|15221893|ref|NP_173324.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|42571539|ref|NP_973860.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75151479|sp|Q8GYP6.1|PPR49_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g18900
gi|26450017|dbj|BAC42129.1| unknown protein [Arabidopsis thaliana]
gi|28827402|gb|AAO50545.1| unknown protein [Arabidopsis thaliana]
gi|332191657|gb|AEE29778.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332191658|gb|AEE29779.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 860
Score = 141 bits (356), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 84/317 (26%), Positives = 152/317 (47%), Gaps = 6/317 (1%)
Query: 70 LKQLKKWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAP 129
LKQ+ + WL+ Q + + + ++ G+ F K+L M + G P
Sbjct: 338 LKQMNDYGNALGFFYWLKRQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQP 397
Query: 130 SVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVF 189
+ V++ L+ +YGR A +F +MQ +G +P +TY ++ + +A A +++
Sbjct: 398 NTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMY 457
Query: 190 MTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFE 249
+ + L PD + ++I KAG A KLF M ++G + VTYN +M
Sbjct: 458 QRM---QAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLH 514
Query: 250 T---NYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTH 306
NY+ K+Y MQ AG +PD V+Y++++ G EEA AVF EM P
Sbjct: 515 AKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDE 574
Query: 307 KAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRR 366
Y +L+D + +G V++A ++ M P++ + ++LS ++ + + A + +
Sbjct: 575 PVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQN 634
Query: 367 LKQDGFVPNVITYGTLI 383
+ G P++ TY L+
Sbjct: 635 MLALGLRPSLQTYTLLL 651
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 88/330 (26%), Positives = 158/330 (47%), Gaps = 8/330 (2%)
Query: 146 RYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQK 205
R++ A +Q+ G R A +LK + N + A F L + + K D
Sbjct: 311 RFRWGPAAEEALQNLGLRIDAYQANQVLK---QMNDYGNALGFFYWL--KRQPGFKHDGH 365
Query: 206 MFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSF--ETNY-KEVSKIYDQM 262
+ M+ +A + KL M G Q +TVTYN L+ NY E +++QM
Sbjct: 366 TYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQM 425
Query: 263 QRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMV 322
Q AG +PD V+Y LI+ + KA + A+ +++ M G+ P Y+++++ +G +
Sbjct: 426 QEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHL 485
Query: 323 DQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTL 382
A +F M C+P++ +Y M+ + A + + A K +R ++ GF P+ +TY +
Sbjct: 486 PAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIV 545
Query: 383 IKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGF 442
++ LE+ ++ +M+ P++ ++ ++D +GK + + A WY+ M G
Sbjct: 546 MEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGL 605
Query: 443 PPDQKAKNILLSLAKTADERNEANELLGNF 472
P+ N LLS ++ EA ELL N
Sbjct: 606 RPNVPTCNSLLSTFLRVNKIAEAYELLQNM 635
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 86/339 (25%), Positives = 157/339 (46%), Gaps = 16/339 (4%)
Query: 147 YKNAEAIFRRMQ-SSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDE-EKSPLKPDQ 204
Y NA F ++ G + TY ++ A +F + LLDE + +P+
Sbjct: 344 YGNALGFFYWLKRQPGFKHDGHTYTTMVGNLGRAKQFGAINK----LLDEMVRDGCQPNT 399
Query: 205 KMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSF--ETNYKEVS-KIYDQ 261
++ +I+ Y +A +A +F M E G + VTY +L+ + + +++ +Y +
Sbjct: 400 VTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQR 459
Query: 262 MQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGM 321
MQ GL PD +Y+++IN GKA A +F EM+D G P YNI++D A +
Sbjct: 460 MQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARN 519
Query: 322 VDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGT 381
A +++ M+ PD +Y+ ++ + +E AE F ++Q ++P+ YG
Sbjct: 520 YQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGL 579
Query: 382 LIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCG 441
L+ + K N+EK + Y M G++PN +++ + + A + M + G
Sbjct: 580 LVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALG 639
Query: 442 FPPDQKAKNILLSLAKTADERNE-----ANELLGNFNHP 475
P + +LLS D R++ +L+ + HP
Sbjct: 640 LRPSLQTYTLLLSCC--TDGRSKLDMGFCGQLMASTGHP 676
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 78/291 (26%), Positives = 145/291 (49%), Gaps = 10/291 (3%)
Query: 63 VLGTLVRLKQLKKWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFM 122
++G L R KQ + ++++L+ + ++ N + + LI +YG+ N+A V + M
Sbjct: 370 MVGNLGRAKQ---FGAINKLLDEM-VRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQM 425
Query: 123 NKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKF 182
+ G P V++ L++ + + G A +++RMQ+ G P TY +I+ +A
Sbjct: 426 QEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHL 485
Query: 183 KEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTY 242
A ++F ++D+ P+ +++M+ ++ KA Y+ A KL+ M G + VTY
Sbjct: 486 PAAHKLFCEMVDQG---CTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTY 542
Query: 243 NSLMSF--ETNY-KEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLD 299
+ +M Y +E ++ +MQ+ PD Y LL++ +GKA E+A ++ ML
Sbjct: 543 SIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLH 602
Query: 300 AGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSA 350
AG+RP N LL F + +A + + M P + +YT +LS
Sbjct: 603 AGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYTLLLSC 653
Score = 99.4 bits (246), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 116/218 (53%), Gaps = 10/218 (4%)
Query: 99 FLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQ 158
+ ++I GK G A K+ M +G P++V++ +M+ + + Y+NA ++R MQ
Sbjct: 472 YSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQ 531
Query: 159 SSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAG 218
++G P +TY I++++ +EAE VF + ++K+ + PD+ ++ +++ ++ KAG
Sbjct: 532 NAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEM--QQKNWI-PDEPVYGLLVDLWGKAG 588
Query: 219 GYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSKIYDQMQRA---GLQPDVVSYA 275
EKA + + M G++ + T NSL+S ++++ Y+ +Q GL+P + +Y
Sbjct: 589 NVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYT 648
Query: 276 LLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILL 313
LL++ R + + + M G H A+ LL
Sbjct: 649 LLLSCCTDGRSKLDMGFCGQLMASTG----HPAHMFLL 682
>gi|326490553|dbj|BAJ84940.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 856
Score = 141 bits (356), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 88/336 (26%), Positives = 163/336 (48%), Gaps = 11/336 (3%)
Query: 70 LKQLKKWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAP 129
LK L N+ WL+ Q + + + +I G+ F K+L M+ P
Sbjct: 337 LKLLHDHNIALGFFHWLKRQPGFKHDGHTYTTMIGILGQAKQFGTMRKLLDEMSSVNCKP 396
Query: 130 SVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVF 189
+VV++ ++ AYGR + A +F M+ +G +P +TY ++ + ++ + A +++
Sbjct: 397 TVVTYNRIIHAYGRANYLREAVKVFEEMEGAGYQPDRVTYCTLIDIHAKSGYLEVAMDLY 456
Query: 190 MTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFE 249
+ ++ L PD + M+ K G A KLF M + G + VTYN +++ +
Sbjct: 457 GRM---QEVGLSPDTFTYSAMVNCLGKGGQLAAAYKLFCEMIDNGCTPNLVTYNIIIALQ 513
Query: 250 T---NYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTH 306
NY V K+Y MQ AG +PD ++Y++++ G +EA AVF EM P
Sbjct: 514 AKARNYDNVVKLYRDMQIAGFRPDKITYSIVMEVLGHCGHLDEAEAVFLEMRRDWA-PDE 572
Query: 307 KAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRR 366
Y +L+D + +G VD+A + M +D P++ + ++LSA++ + + A +
Sbjct: 573 PVYGLLVDLWGKAGNVDKALGWYHAMLQDGLQPNVPTCNSLLSAFLKLNRFQDAYGVLQN 632
Query: 367 LKQDGFVPNVITYGTLIK----GYAKVNNLEKMMEI 398
+ G VP++ TY L+ +A++ ++M I
Sbjct: 633 MLAQGLVPSLQTYTLLLSCCTDAHAQMGLCCQLMAI 668
Score = 128 bits (321), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 88/355 (24%), Positives = 173/355 (48%), Gaps = 15/355 (4%)
Query: 70 LKQLKKWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKK-GYA 128
L+Q+K + VL+ LR + F L L+ D N A ++ ++ G+
Sbjct: 308 LQQMKWGPMTEHVLDGLRCKID-AFQANQVLKLLH------DHNIALGFFHWLKRQPGFK 360
Query: 129 PSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEV 188
++T ++ G+ ++ + M S +P+ +TY I+ + AN +EA +V
Sbjct: 361 HDGHTYTTMIGILGQAKQFGTMRKLLDEMSSVNCKPTVVTYNRIIHAYGRANYLREAVKV 420
Query: 189 FMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSF 248
F + E + +PD+ + +I ++ K+G E A L+ M E G+ T TY+++++
Sbjct: 421 FEEM---EGAGYQPDRVTYCTLIDIHAKSGYLEVAMDLYGRMQEVGLSPDTFTYSAMVNC 477
Query: 249 ETNYKEVS---KIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPT 305
+++ K++ +M G P++V+Y ++I KAR + + ++ +M AG RP
Sbjct: 478 LGKGGQLAAAYKLFCEMIDNGCTPNLVTYNIIIALQAKARNYDNVVKLYRDMQIAGFRPD 537
Query: 306 HKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFR 365
Y+I+++ G +D+A VF MRRD +PD Y ++ + A +++ A ++
Sbjct: 538 KITYSIVMEVLGHCGHLDEAEAVFLEMRRDW-APDEPVYGLLVDLWGKAGNVDKALGWYH 596
Query: 366 RLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDA 420
+ QDG PNV T +L+ + K+N + + M G+ P+ +T ++
Sbjct: 597 AMLQDGLQPNVPTCNSLLSAFLKLNRFQDAYGVLQNMLAQGLVPSLQTYTLLLSC 651
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 84/313 (26%), Positives = 149/313 (47%), Gaps = 10/313 (3%)
Query: 168 TYQIILKLFVEANKFKEAEEVFMTLLDEEKSP-LKPDQKMFHMMIYMYKKAGGYEKARKL 226
TY ++ + +A +F + LLDE S KP ++ +I+ Y +A +A K+
Sbjct: 365 TYTTMIGILGQAKQFGTMRK----LLDEMSSVNCKPTVVTYNRIIHAYGRANYLREAVKV 420
Query: 227 FALMAERGVQQSTVTYNSLMSF--ETNYKEVS-KIYDQMQRAGLQPDVVSYALLINAYGK 283
F M G Q VTY +L+ ++ Y EV+ +Y +MQ GL PD +Y+ ++N GK
Sbjct: 421 FEEMEGAGYQPDRVTYCTLIDIHAKSGYLEVAMDLYGRMQEVGLSPDTFTYSAMVNCLGK 480
Query: 284 ARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICS 343
+ A +F EM+D G P YNI++ A + D +++ M+ PD +
Sbjct: 481 GGQLAAAYKLFCEMIDNGCTPNLVTYNIIIALQAKARNYDNVVKLYRDMQIAGFRPDKIT 540
Query: 344 YTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMR 403
Y+ ++ + ++ AE F +++D + P+ YG L+ + K N++K + Y M
Sbjct: 541 YSIVMEVLGHCGHLDEAEAVFLEMRRD-WAPDEPVYGLLVDLWGKAGNVDKALGWYHAML 599
Query: 404 VNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTAD-ER 462
+G++PN +++ A+ K F A + M + G P + +LLS A +
Sbjct: 600 QDGLQPNVPTCNSLLSAFLKLNRFQDAYGVLQNMLAQGLVPSLQTYTLLLSCCTDAHAQM 659
Query: 463 NEANELLGNFNHP 475
+L+ HP
Sbjct: 660 GLCCQLMAITGHP 672
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 68/240 (28%), Positives = 121/240 (50%), Gaps = 4/240 (1%)
Query: 229 LMAERGVQQSTVTYNSLMSFETNYKE---VSKIYDQMQRAGLQPDVVSYALLINAYGKAR 285
L + G + TY +++ K+ + K+ D+M +P VV+Y +I+AYG+A
Sbjct: 353 LKRQPGFKHDGHTYTTMIGILGQAKQFGTMRKLLDEMSSVNCKPTVVTYNRIIHAYGRAN 412
Query: 286 REEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYT 345
EA+ VFEEM AG +P Y L+D A SG ++ A ++ M+ SPD +Y+
Sbjct: 413 YLREAVKVFEEMEGAGYQPDRVTYCTLIDIHAKSGYLEVAMDLYGRMQEVGLSPDTFTYS 472
Query: 346 TMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVN 405
M++ + A K F + +G PN++TY +I AK N + ++++Y M++
Sbjct: 473 AMVNCLGKGGQLAAAYKLFCEMIDNGCTPNLVTYNIIIALQAKARNYDNVVKLYRDMQIA 532
Query: 406 GIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEA 465
G +P++ ++ +M+ G D A + EM + PD+ +L+ L A ++A
Sbjct: 533 GFRPDKITYSIVMEVLGHCGHLDEAEAVFLEMRR-DWAPDEPVYGLLVDLWGKAGNVDKA 591
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 68/258 (26%), Positives = 132/258 (51%), Gaps = 4/258 (1%)
Query: 200 LKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSF--ETNY-KEVS 256
K D + MI + +A + RKL M+ + + VTYN ++ NY +E
Sbjct: 359 FKHDGHTYTTMIGILGQAKQFGTMRKLLDEMSSVNCKPTVVTYNRIIHAYGRANYLREAV 418
Query: 257 KIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAF 316
K++++M+ AG QPD V+Y LI+ + K+ E A+ ++ M + G+ P Y+ +++
Sbjct: 419 KVFEEMEGAGYQPDRVTYCTLIDIHAKSGYLEVAMDLYGRMQEVGLSPDTFTYSAMVNCL 478
Query: 317 AISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNV 376
G + A +F M + C+P++ +Y +++ A + + K +R ++ GF P+
Sbjct: 479 GKGGQLAAAYKLFCEMIDNGCTPNLVTYNIIIALQAKARNYDNVVKLYRDMQIAGFRPDK 538
Query: 377 ITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKE 436
ITY +++ +L++ ++ +MR + P++ ++ ++D +GK + D A+ WY
Sbjct: 539 ITYSIVMEVLGHCGHLDEAEAVFLEMRRD-WAPDEPVYGLLVDLWGKAGNVDKALGWYHA 597
Query: 437 MESCGFPPDQKAKNILLS 454
M G P+ N LLS
Sbjct: 598 MLQDGLQPNVPTCNSLLS 615
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 50/112 (44%), Gaps = 1/112 (0%)
Query: 360 AEKFFRRLK-QDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIM 418
A FF LK Q GF + TY T+I + M ++ D+M KP + I+
Sbjct: 346 ALGFFHWLKRQPGFKHDGHTYTTMIGILGQAKQFGTMRKLLDEMSSVNCKPTVVTYNRII 405
Query: 419 DAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLG 470
AYG+ AV ++EME G+ PD+ L+ + + A +L G
Sbjct: 406 HAYGRANYLREAVKVFEEMEGAGYQPDRVTYCTLIDIHAKSGYLEVAMDLYG 457
>gi|242047602|ref|XP_002461547.1| hypothetical protein SORBIDRAFT_02g004530 [Sorghum bicolor]
gi|241924924|gb|EER98068.1| hypothetical protein SORBIDRAFT_02g004530 [Sorghum bicolor]
Length = 696
Score = 141 bits (356), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 82/322 (25%), Positives = 161/322 (50%), Gaps = 6/322 (1%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
+I K +KAE VL M + P+ ++ +L+ Y G++ A I + M G
Sbjct: 293 VIDGLCKVQAMDKAEAVLQQMIDEHIMPNCTTYNSLIHGYLSSGQWTEAVRILKEMSRDG 352
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
RP+ +TY +++ ++ EA E+F +++ +S KP+ + +++ Y G
Sbjct: 353 QRPNVVTYSMLIDCLCKSGLHAEAREIFNSMI---QSGQKPNASTYGSLLHGYATEGNLV 409
Query: 222 KARKLFALMAERGVQQSTVTYN-SLMSFETNYK--EVSKIYDQMQRAGLQPDVVSYALLI 278
+ LM + G++ +N + ++ + E S +++MQ+ G PD+V+Y +I
Sbjct: 410 DMNNVKDLMVQNGMRPGRHVFNIEIYAYCKCGRLDEASLTFNKMQQQGFMPDIVAYTTVI 469
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCS 338
+ K R ++A++ F +M+D G+ P +N L+ FA+ G ++A +F M
Sbjct: 470 DGLCKIGRLDDAMSRFCQMIDDGLSPDIITFNTLIHGFALHGKWEKAEELFYEMMDRGIP 529
Query: 339 PDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEI 398
P++ ++ +M+ + A K F + + G PNV++Y T+I GY + ++M++
Sbjct: 530 PNVNTFNSMIDKLFKEGKVTEARKLFDLMPRAGAKPNVVSYNTMIHGYFIAGEVGEVMKL 589
Query: 399 YDKMRVNGIKPNQTIFTTIMDA 420
D M + G+KP F T++D
Sbjct: 590 LDDMLLIGLKPTAVTFNTLLDG 611
Score = 138 bits (347), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 91/361 (25%), Positives = 173/361 (47%), Gaps = 8/361 (2%)
Query: 114 KAEKVLSFMNKKG--YAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQI 171
+A +++ M + G P+VVS+T ++ + + G A +F +M G P+ +T
Sbjct: 233 EAAELIHMMAEDGDNCPPNVVSYTTVIHGFFKEGDVGKAYTLFCKMLDHGIPPNVVTCNS 292
Query: 172 ILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMA 231
++ + +AE V ++DE + P+ ++ +I+ Y +G + +A ++ M+
Sbjct: 293 VIDGLCKVQAMDKAEAVLQQMIDEH---IMPNCTTYNSLIHGYLSSGQWTEAVRILKEMS 349
Query: 232 ERGVQQSTVTYNSLMSFETN---YKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREE 288
G + + VTY+ L+ + E +I++ M ++G +P+ +Y L++ Y
Sbjct: 350 RDGQRPNVVTYSMLIDCLCKSGLHAEAREIFNSMIQSGQKPNASTYGSLLHGYATEGNLV 409
Query: 289 EALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTML 348
+ V + M+ G+RP +NI + A+ G +D+A F M++ PDI +YTT++
Sbjct: 410 DMNNVKDLMVQNGMRPGRHVFNIEIYAYCKCGRLDEASLTFNKMQQQGFMPDIVAYTTVI 469
Query: 349 SAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIK 408
++ A F ++ DG P++IT+ TLI G+A EK E++ +M GI
Sbjct: 470 DGLCKIGRLDDAMSRFCQMIDDGLSPDIITFNTLIHGFALHGKWEKAEELFYEMMDRGIP 529
Query: 409 PNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANEL 468
PN F +++D K A + M G P+ + N ++ A E E +L
Sbjct: 530 PNVNTFNSMIDKLFKEGKVTEARKLFDLMPRAGAKPNVVSYNTMIHGYFIAGEVGEVMKL 589
Query: 469 L 469
L
Sbjct: 590 L 590
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 85/342 (24%), Positives = 162/342 (47%), Gaps = 28/342 (8%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
LI Y G + +A ++L M++ G P+VV+++ L++ + G + A IF M SG
Sbjct: 328 LIHGYLSSGQWTEAVRILKEMSRDGQRPNVVTYSMLIDCLCKSGLHAEAREIFNSMIQSG 387
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
+P+A TY +L + + V ++ ++ ++P + +F++ IY Y K G +
Sbjct: 388 QKPNASTYGSLLHGYATEGNLVDMNNVKDLMV---QNGMRPGRHVFNIEIYAYCKCGRLD 444
Query: 222 KARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSKIYDQMQRA------GLQPDVVSYA 275
+A F M ++G V Y +++ ++ ++ D M R GL PD++++
Sbjct: 445 EASLTFNKMQQQGFMPDIVAYTTVID---GLCKIGRLDDAMSRFCQMIDDGLSPDIITFN 501
Query: 276 LLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRD 335
LI+ + + E+A +F EM+D G+ P +N ++D G V +AR +F M R
Sbjct: 502 TLIHGFALHGKWEKAEELFYEMMDRGIPPNVNTFNSMIDKLFKEGKVTEARKLFDLMPRA 561
Query: 336 RCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKM 395
P++ SY TM+ Y A ++ K + G P +T+ TL+ G +
Sbjct: 562 GAKPNVVSYNTMIHGYFIAGEVGEVMKLLDDMLLIGLKPTAVTFNTLLDGMVSM------ 615
Query: 396 MEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEM 437
G+KP+ T++D+ ++ + + ++EM
Sbjct: 616 ----------GLKPDVVTCKTLIDSCCEDGRIEDILTLFREM 647
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 92/362 (25%), Positives = 169/362 (46%), Gaps = 6/362 (1%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + + +I + K+GD KA + M G P+VV+ ++++ + AEA+
Sbjct: 251 NVVSYTTVIHGFFKEGDVGKAYTLFCKMLDHGIPPNVVTCNSVIDGLCKVQAMDKAEAVL 310
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
++M P+ TY ++ ++ + ++ EA + L + + +P+ + M+I
Sbjct: 311 QQMIDEHIMPNCTTYNSLIHGYLSSGQWTEAVRI---LKEMSRDGQRPNVVTYSMLIDCL 367
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSLM---SFETNYKEVSKIYDQMQRAGLQPDV 271
K+G + +AR++F M + G + + TY SL+ + E N +++ + D M + G++P
Sbjct: 368 CKSGLHAEAREIFNSMIQSGQKPNASTYGSLLHGYATEGNLVDMNNVKDLMVQNGMRPGR 427
Query: 272 VSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKC 331
+ + I AY K R +EA F +M G P AY ++D G +D A + F
Sbjct: 428 HVFNIEIYAYCKCGRLDEASLTFNKMQQQGFMPDIVAYTTVIDGLCKIGRLDDAMSRFCQ 487
Query: 332 MRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNN 391
M D SPDI ++ T++ + E AE+ F + G PNV T+ ++I K
Sbjct: 488 MIDDGLSPDIITFNTLIHGFALHGKWEKAEELFYEMMDRGIPPNVNTFNSMIDKLFKEGK 547
Query: 392 LEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNI 451
+ + +++D M G KPN + T++ Y + + +M G P N
Sbjct: 548 VTEARKLFDLMPRAGAKPNVVSYNTMIHGYFIAGEVGEVMKLLDDMLLIGLKPTAVTFNT 607
Query: 452 LL 453
LL
Sbjct: 608 LL 609
Score = 132 bits (333), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 100/422 (23%), Positives = 173/422 (40%), Gaps = 40/422 (9%)
Query: 99 FLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNA-EAIFRRM 157
F +LI+ G N L + K G V+ T L+ R +A + RRM
Sbjct: 147 FGILISCCCDAGCLNLGFAALGQIIKTGLRAQAVTFTPLLRTLCAEKRTSDAMNIVLRRM 206
Query: 158 QSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKA 217
G P +Y +LK K +EA E + ++ E+ P+ + +I+ + K
Sbjct: 207 PELGCTPDVFSYTTLLKGLCAEKKCEEAAE-LIHMMAEDGDNCPPNVVSYTTVIHGFFKE 265
Query: 218 GGYEKARKLFALMAERGVQQSTVTYNS-------------------------LMSFETNY 252
G KA LF M + G+ + VT NS +M T Y
Sbjct: 266 GDVGKAYTLFCKMLDHGIPPNVVTCNSVIDGLCKVQAMDKAEAVLQQMIDEHIMPNCTTY 325
Query: 253 -------------KEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLD 299
E +I +M R G +P+VV+Y++LI+ K+ EA +F M+
Sbjct: 326 NSLIHGYLSSGQWTEAVRILKEMSRDGQRPNVVTYSMLIDCLCKSGLHAEAREIFNSMIQ 385
Query: 300 AGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEG 359
+G +P Y LL +A G + V M ++ P + + AY ++
Sbjct: 386 SGQKPNASTYGSLLHGYATEGNLVDMNNVKDLMVQNGMRPGRHVFNIEIYAYCKCGRLDE 445
Query: 360 AEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMD 419
A F +++Q GF+P+++ Y T+I G K+ L+ M + +M +G+ P+ F T++
Sbjct: 446 ASLTFNKMQQQGFMPDIVAYTTVIDGLCKIGRLDDAMSRFCQMIDDGLSPDIITFNTLIH 505
Query: 420 AYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEP 479
+ + ++ A + EM G PP+ N ++ + EA +L +P
Sbjct: 506 GFALHGKWEKAEELFYEMMDRGIPPNVNTFNSMIDKLFKEGKVTEARKLFDLMPRAGAKP 565
Query: 480 GI 481
+
Sbjct: 566 NV 567
>gi|115446945|ref|NP_001047252.1| Os02g0582300 [Oryza sativa Japonica Group]
gi|50253069|dbj|BAD29317.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113536783|dbj|BAF09166.1| Os02g0582300 [Oryza sativa Japonica Group]
Length = 845
Score = 141 bits (356), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 95/347 (27%), Positives = 160/347 (46%), Gaps = 10/347 (2%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
+I + ++ D +A + LS M + G+ P + +L+ Y R + A +F +M G
Sbjct: 159 VIRSLCRRADLARALRYLSLMVRSGWRPDAYTFNSLIVGYCRTNQVDVARDLFDKMPLRG 218
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
++Y +++ EA + EA E+F + D+ PD M+ ++ A E
Sbjct: 219 FAQDVVSYATLIEGLCEAGRIDEAVELFGEM-DQ------PDMHMYAALVKGLCNAERGE 271
Query: 222 KARKLFALMAERGVQQSTVTYNSLMSF---ETNYKEVSKIYDQMQRAGLQPDVVSYALLI 278
+ + M E G + ST Y +++ F E KE ++ +M GL P VV+ +I
Sbjct: 272 EGLLMLRRMKELGWRPSTRAYAAVVDFRCRERKAKEAEEMLQEMFEKGLAPCVVTCTAVI 331
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCS 338
NAY K R +AL V E M G +P YN L+ F G V +A T+ MR +
Sbjct: 332 NAYCKEGRMSDALRVLELMKLRGCKPNVWTYNALVQGFCNEGKVHKAMTLLNKMRACGVN 391
Query: 339 PDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEI 398
PD +Y ++ +E A + R ++ DG + + TY LI K ++ +
Sbjct: 392 PDAVTYNLLIRGQCIDGHIESAFRLLRLMEGDGLIADQYTYNALINALCKDGRTDQACSL 451
Query: 399 YDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPD 445
+D + GIKPN F ++++ K+ D A + ++M S G PD
Sbjct: 452 FDSLETRGIKPNAVTFNSLINGLCKSGKADIAWKFLEKMVSAGCTPD 498
Score = 125 bits (313), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 95/394 (24%), Positives = 162/394 (41%), Gaps = 37/394 (9%)
Query: 86 LRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGG 145
L ++S W + F LI Y + + A + M +G+A VVS+ L+E G
Sbjct: 178 LMVRSGWRPDAYTFNSLIVGYCRTNQVDVARDLFDKMPLRGFAQDVVSYATLIEGLCEAG 237
Query: 146 RYKNAEAIF-------------------------------RRMQSSGPRPSALTYQIILK 174
R A +F RRM+ G RPS Y ++
Sbjct: 238 RIDEAVELFGEMDQPDMHMYAALVKGLCNAERGEEGLLMLRRMKELGWRPSTRAYAAVVD 297
Query: 175 LFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERG 234
K KEAEE+ + ++ L P +I Y K G A ++ LM RG
Sbjct: 298 FRCRERKAKEAEEMLQEMFEKG---LAPCVVTCTAVINAYCKEGRMSDALRVLELMKLRG 354
Query: 235 VQQSTVTYNSLMSFETNYKEVSK---IYDQMQRAGLQPDVVSYALLINAYGKARREEEAL 291
+ + TYN+L+ N +V K + ++M+ G+ PD V+Y LLI E A
Sbjct: 355 CKPNVWTYNALVQGFCNEGKVHKAMTLLNKMRACGVNPDAVTYNLLIRGQCIDGHIESAF 414
Query: 292 AVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAY 351
+ M G+ YN L++A G DQA ++F + P+ ++ ++++
Sbjct: 415 RLLRLMEGDGLIADQYTYNALINALCKDGRTDQACSLFDSLETRGIKPNAVTFNSLINGL 474
Query: 352 VNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQ 411
+ + A KF ++ G P+ TY + I+ K+ ++ + +M +KP+
Sbjct: 475 CKSGKADIAWKFLEKMVSAGCTPDTYTYSSFIEHLCKMKGSQEGLSFIGEMLQKDVKPST 534
Query: 412 TIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPD 445
+T ++ K +++ + EM S G PD
Sbjct: 535 VNYTIVIHKLLKERNYGLVARTWGEMVSSGCNPD 568
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 96/391 (24%), Positives = 170/391 (43%), Gaps = 23/391 (5%)
Query: 101 MLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSS 160
+LI G A ++L M G ++ AL+ A + GR A ++F +++
Sbjct: 399 LLIRGQCIDGHIESAFRLLRLMEGDGLIADQYTYNALINALCKDGRTDQACSLFDSLETR 458
Query: 161 GPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGY 220
G +P+A+T+ ++ ++ K A + ++ + PD + I K G
Sbjct: 459 GIKPNAVTFNSLINGLCKSGKADIAWKFLEKMVS---AGCTPDTYTYSSFIEHLCKMKGS 515
Query: 221 EKARKLFALMAERGVQQSTVTYNSLMSF---ETNYKEVSKIYDQMQRAGLQPDVVSYALL 277
++ M ++ V+ STV Y ++ E NY V++ + +M +G PDVV+Y
Sbjct: 516 QEGLSFIGEMLQKDVKPSTVNYTIVIHKLLKERNYGLVARTWGEMVSSGCNPDVVTYTTS 575
Query: 278 INAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRC 337
+ AY R EA V EM GV AYN L+D A G D A ++ K M
Sbjct: 576 MRAYCIEGRLNEAENVLMEMSKNGVTVDTMAYNTLMDGHASIGQTDHAVSILKQMTSVAS 635
Query: 338 SPDICSYTTMLSAYV-----------------NASDMEGAEKFFRRLKQDGFVPNVITYG 380
P+ +Y +L V A ++ F +K++ F+PN TY
Sbjct: 636 VPNQFTYFILLRHLVRMRLVEDVLPLTPAGVWKAIELTDVFGLFDVMKKNEFLPNSGTYS 695
Query: 381 TLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESC 440
++++G+++ E+ + M+ + I N+ I+T ++ + K+K + A V M
Sbjct: 696 SILEGFSEDGRTEEATSLVSLMKEDSISLNEDIYTALVTCFCKSKRYLDAWVLVCSMIQH 755
Query: 441 GFPPDQKAKNILLSLAKTADERNEANELLGN 471
GF P + LLS + ++A E+ N
Sbjct: 756 GFIPQLMSYQHLLSGLICEGQTDKAKEIFMN 786
Score = 115 bits (288), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 90/394 (22%), Positives = 173/394 (43%), Gaps = 63/394 (15%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
+I AY K+G + A +VL M +G P+V ++ AL++ + G+ A + +M++ G
Sbjct: 330 VINAYCKEGRMSDALRVLELMKLRGCKPNVWTYNALVQGFCNEGKVHKAMTLLNKMRACG 389
Query: 162 PRPSALTYQIILK-LFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGY 220
P A+TY ++++ ++ + E F L E L DQ ++ +I K G
Sbjct: 390 VNPDAVTYNLLIRGQCIDGH----IESAFRLLRLMEGDGLIADQYTYNALINALCKDGRT 445
Query: 221 EKARKLFALMAERGVQQSTVTYNSLMS--FETNYKEVS-KIYDQMQRAGLQPDVVSYALL 277
++A LF + RG++ + VT+NSL++ ++ +++ K ++M AG PD +Y+
Sbjct: 446 DQACSLFDSLETRGIKPNAVTFNSLINGLCKSGKADIAWKFLEKMVSAGCTPDTYTYSSF 505
Query: 278 INAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLD----------------------- 314
I K + +E L+ EML V+P+ Y I++
Sbjct: 506 IEHLCKMKGSQEGLSFIGEMLQKDVKPSTVNYTIVIHKLLKERNYGLVARTWGEMVSSGC 565
Query: 315 ------------AFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEK 362
A+ I G +++A V M ++ + D +Y T++ + + + A
Sbjct: 566 NPDVVTYTTSMRAYCIEGRLNEAENVLMEMSKNGVTVDTMAYNTLMDGHASIGQTDHAVS 625
Query: 363 FFRRLKQDGFVPNVITYGTLIK-----------------GYAKVNNLEKMMEIYDKMRVN 405
+++ VPN TY L++ G K L + ++D M+ N
Sbjct: 626 ILKQMTSVASVPNQFTYFILLRHLVRMRLVEDVLPLTPAGVWKAIELTDVFGLFDVMKKN 685
Query: 406 GIKPNQTIFTTIMDAY---GKNKDFDSAVVWYKE 436
PN +++I++ + G+ ++ S V KE
Sbjct: 686 EFLPNSGTYSSILEGFSEDGRTEEATSLVSLMKE 719
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 91/362 (25%), Positives = 155/362 (42%), Gaps = 16/362 (4%)
Query: 136 ALMEAYGRGGRYKNAEAIFRRMQ-SSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLD 194
+L+ R A +F M + P P+A TY +++ A +++L+
Sbjct: 122 SLLAHLSRFALAPLALRLFAHMHRHAPPAPTAPTYNAVIRSLCRRADLARALR-YLSLM- 179
Query: 195 EEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKE 254
+S +PD F+ +I Y + + AR LF M RG Q V+Y +L+ E
Sbjct: 180 -VRSGWRPDAYTFNSLIVGYCRTNQVDVARDLFDKMPLRGFAQDVVSYATLIE---GLCE 235
Query: 255 VSKIYDQMQRAGL--QPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNIL 312
+I + ++ G QPD+ YA L+ A R EE L + M + G RP+ +AY +
Sbjct: 236 AGRIDEAVELFGEMDQPDMHMYAALVKGLCNAERGEEGLLMLRRMKELGWRPSTRAYAAV 295
Query: 313 LDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGF 372
+D +A + + M +P + + T +++AY M A + +K G
Sbjct: 296 VDFRCRERKAKEAEEMLQEMFEKGLAPCVVTCTAVINAYCKEGRMSDALRVLELMKLRGC 355
Query: 373 VPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVV 432
PNV TY L++G+ + K M + +KMR G+ P+ + ++ + +SA
Sbjct: 356 KPNVWTYNALVQGFCNEGKVHKAMTLLNKMRACGVNPDAVTYNLLIRGQCIDGHIESAFR 415
Query: 433 WYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPG-------INGLS 485
+ ME G DQ N L++ ++A L + +P INGL
Sbjct: 416 LLRLMEGDGLIADQYTYNALINALCKDGRTDQACSLFDSLETRGIKPNAVTFNSLINGLC 475
Query: 486 IS 487
S
Sbjct: 476 KS 477
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 71/354 (20%), Positives = 137/354 (38%), Gaps = 23/354 (6%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + F LI K G + A K L M G P ++++ +E + + +
Sbjct: 463 NAVTFNSLINGLCKSGKADIAWKFLEKMVSAGCTPDTYTYSSFIEHLCKMKGSQEGLSFI 522
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
M +PS + Y I++ ++ + + ++ S PD + + Y
Sbjct: 523 GEMLQKDVKPSTVNYTIVIHKLLKERNYGLVARTWGEMVS---SGCNPDVVTYTTSMRAY 579
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVS---KIYDQMQRAGLQPDV 271
G +A + M++ GV T+ YN+LM + + I QM P+
Sbjct: 580 CIEGRLNEAENVLMEMSKNGVTVDTMAYNTLMDGHASIGQTDHAVSILKQMTSVASVPNQ 639
Query: 272 VSYALLINAYGKARREEEAL-----------------AVFEEMLDAGVRPTHKAYNILLD 314
+Y +L+ + R E+ L +F+ M P Y+ +L+
Sbjct: 640 FTYFILLRHLVRMRLVEDVLPLTPAGVWKAIELTDVFGLFDVMKKNEFLPNSGTYSSILE 699
Query: 315 AFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVP 374
F+ G ++A ++ M+ D S + YT +++ + + A + Q GF+P
Sbjct: 700 GFSEDGRTEEATSLVSLMKEDSISLNEDIYTALVTCFCKSKRYLDAWVLVCSMIQHGFIP 759
Query: 375 NVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFD 428
+++Y L+ G +K EI+ R P++ ++ I+D K D
Sbjct: 760 QLMSYQHLLSGLICEGQTDKAKEIFMNSRWKDYSPDEIVWKVIIDGLIKKGHSD 813
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 63/315 (20%), Positives = 122/315 (38%), Gaps = 53/315 (16%)
Query: 105 AYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRP 164
AY +G N+AE VL M+K G +++ LM+ + G+ +A +I ++M S P
Sbjct: 578 AYCIEGRLNEAENVLMEMSKNGVTVDTMAYNTLMDGHASIGQTDHAVSILKQMTSVASVP 637
Query: 165 SALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKAR 224
+ TY I+L+ V + + E+V PL P G KA
Sbjct: 638 NQFTYFILLRHLV---RMRLVEDVL---------PLTP---------------AGVWKAI 670
Query: 225 KLFALMAERGVQQSTVTYNSLMSFETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKA 284
+L +V ++D M++ P+ +Y+ ++ + +
Sbjct: 671 EL--------------------------TDVFGLFDVMKKNEFLPNSGTYSSILEGFSED 704
Query: 285 RREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSY 344
R EEA ++ M + + Y L+ F S A + M + P + SY
Sbjct: 705 GRTEEATSLVSLMKEDSISLNEDIYTALVTCFCKSKRYLDAWVLVCSMIQHGFIPQLMSY 764
Query: 345 TTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRV 404
+LS + + A++ F + + P+ I + +I G K + + E+ +
Sbjct: 765 QHLLSGLICEGQTDKAKEIFMNSRWKDYSPDEIVWKVIIDGLIKKGHSDISREMIIMLER 824
Query: 405 NGIKPNQTIFTTIMD 419
+P+ + + +
Sbjct: 825 MNCRPSHQTYAMLTE 839
>gi|15238505|ref|NP_201359.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75180383|sp|Q9LSL9.1|PP445_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g65560
gi|8978284|dbj|BAA98175.1| unnamed protein product [Arabidopsis thaliana]
gi|110737310|dbj|BAF00601.1| hypothetical protein [Arabidopsis thaliana]
gi|332010688|gb|AED98071.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 915
Score = 141 bits (356), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 97/366 (26%), Positives = 179/366 (48%), Gaps = 10/366 (2%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + +LI + Q F KA ++L M +KG P+V+++ AL+ Y + G ++A +
Sbjct: 357 NIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVV 416
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
M+S P+ TY ++K + ++N K A V +L+ + + PD ++ +I
Sbjct: 417 ELMESRKLSPNTRTYNELIKGYCKSNVHK-AMGVLNKMLERK---VLPDVVTYNSLIDGQ 472
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSK---IYDQMQRAGLQPDV 271
++G ++ A +L +LM +RG+ TY S++ K V + ++D +++ G+ P+V
Sbjct: 473 CRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNV 532
Query: 272 VSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKC 331
V Y LI+ Y KA + +EA + E+ML P +N L+ G + +A + +
Sbjct: 533 VMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEK 592
Query: 332 MRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNN 391
M + P + + T ++ + D + A F+++ G P+ TY T I+ Y +
Sbjct: 593 MVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGR 652
Query: 392 LEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNI 451
L ++ KMR NG+ P+ +++++ YG + A K M G P Q +
Sbjct: 653 LLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQ---HT 709
Query: 452 LLSLAK 457
LSL K
Sbjct: 710 FLSLIK 715
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 86/353 (24%), Positives = 167/353 (47%), Gaps = 5/353 (1%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
NE+ + LI ++A + M P+V ++T L+++ R A +
Sbjct: 287 NEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLV 346
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
+ M+ +G +P+ TY +++ KF++A E+ +L++ L P+ ++ +I Y
Sbjct: 347 KEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKG---LMPNVITYNALINGY 403
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSLMS--FETNYKEVSKIYDQMQRAGLQPDVV 272
K G E A + LM R + +T TYN L+ ++N + + ++M + PDVV
Sbjct: 404 CKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCKSNVHKAMGVLNKMLERKVLPDVV 463
Query: 273 SYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCM 332
+Y LI+ ++ + A + M D G+ P Y ++D+ S V++A +F +
Sbjct: 464 TYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSL 523
Query: 333 RRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNL 392
+ +P++ YT ++ Y A ++ A ++ +PN +T+ LI G L
Sbjct: 524 EQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKL 583
Query: 393 EKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPD 445
++ + +KM G++P + T ++ K+ DFD A +++M S G PD
Sbjct: 584 KEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPD 636
Score = 115 bits (287), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 79/327 (24%), Positives = 152/327 (46%), Gaps = 7/327 (2%)
Query: 122 MNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANK 181
M + G P++ ++T L+++ +++ A + +M G P+ +TY ++ + +
Sbjct: 349 MEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGM 408
Query: 182 FKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVT 241
++A +V + L++ K L P+ + ++ +I Y K+ + KA + M ER V VT
Sbjct: 409 IEDAVDV-VELMESRK--LSPNTRTYNELIKGYCKSNVH-KAMGVLNKMLERKVLPDVVT 464
Query: 242 YNSLMSFET---NYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEML 298
YNSL+ + N+ ++ M GL PD +Y +I++ K++R EEA +F+ +
Sbjct: 465 YNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLE 524
Query: 299 DAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDME 358
GV P Y L+D + +G VD+A + + M C P+ ++ ++ ++
Sbjct: 525 QKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLK 584
Query: 359 GAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIM 418
A ++ + G P V T LI K + + + +M +G KP+ +TT +
Sbjct: 585 EATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFI 644
Query: 419 DAYGKNKDFDSAVVWYKEMESCGFPPD 445
Y + A +M G PD
Sbjct: 645 QTYCREGRLLDAEDMMAKMRENGVSPD 671
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 89/390 (22%), Positives = 163/390 (41%), Gaps = 39/390 (10%)
Query: 92 WDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAE 151
W + M I + K +A + + +KG P+VV +TAL++ Y + G+ A
Sbjct: 498 WTYTSM-----IDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAH 552
Query: 152 AIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEE--KSPLKPDQKMFHM 209
+ +M S P++LT+ ++ K KEA TLL+E+ K L+P +
Sbjct: 553 LMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEA-----TLLEEKMVKIGLQPTVSTDTI 607
Query: 210 MIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSKIYD------QMQ 263
+I+ K G ++ A F M G + TY +F Y ++ D +M+
Sbjct: 608 LIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYT---TFIQTYCREGRLLDAEDMMAKMR 664
Query: 264 RAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVD 323
G+ PD+ +Y+ LI YG + A V + M D G P+ + L+
Sbjct: 665 ENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHL------- 717
Query: 324 QARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLI 383
K ++ P++C+ + M+ + + + ++ + PN +Y LI
Sbjct: 718 ---LEMKYGKQKGSEPELCAMSNMM-------EFDTVVELLEKMVEHSVTPNAKSYEKLI 767
Query: 384 KGYAKVNNLEKMMEIYDKMRVN-GIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGF 442
G +V NL +++D M+ N GI P++ +F ++ K K + A +M G
Sbjct: 768 LGICEVGNLRVAEKVFDHMQRNEGISPSELVFNALLSCCCKLKKHNEAAKVVDDMICVGH 827
Query: 443 PPDQKAKNILLSLAKTADERNEANELLGNF 472
P ++ +L+ E+ + N
Sbjct: 828 LPQLESCKVLICGLYKKGEKERGTSVFQNL 857
Score = 112 bits (279), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 86/390 (22%), Positives = 166/390 (42%), Gaps = 12/390 (3%)
Query: 100 LMLITAYGKQGDFNKAEKVLSFMNKK-----GYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
L++I + GD + MNK Y + + L+ + R G + ++
Sbjct: 147 LLMIKSCDSVGDALYVLDLCRKMNKDERFELKYKLIIGCYNTLLNSLARFGLVDEMKQVY 206
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
M P+ TY ++ + + +EA + +++ + L PD + +I Y
Sbjct: 207 MEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIVE---AGLDPDFFTYTSLIMGY 263
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSL---MSFETNYKEVSKIYDQMQRAGLQPDV 271
+ + A K+F M +G +++ V Y L + E ++ +M+ P V
Sbjct: 264 CQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTV 323
Query: 272 VSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKC 331
+Y +LI + + R+ EAL + +EM + G++P Y +L+D+ ++AR +
Sbjct: 324 RTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQ 383
Query: 332 MRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNN 391
M P++ +Y +++ Y +E A ++ PN TY LIKGY K +N
Sbjct: 384 MLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCK-SN 442
Query: 392 LEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNI 451
+ K M + +KM + P+ + +++D ++ +FDSA M G PDQ
Sbjct: 443 VHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTS 502
Query: 452 LLSLAKTADERNEANELLGNFNHPNNEPGI 481
++ + EA +L + P +
Sbjct: 503 MIDSLCKSKRVEEACDLFDSLEQKGVNPNV 532
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 88/381 (23%), Positives = 152/381 (39%), Gaps = 25/381 (6%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + + LI Y K G ++A +L M K P+ ++ AL+ G+ K A +
Sbjct: 531 NVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLE 590
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
+M G +P+ T I++ ++ F A F +L S KPD + I Y
Sbjct: 591 EKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLS---SGTKPDAHTYTTFIQTY 647
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSKIYDQMQR---AGLQPDV 271
+ G A + A M E GV TY+SL+ + + + +D ++R G +P
Sbjct: 648 CREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQ 707
Query: 272 VSYALLIN-----AYGKARREEEALA-------------VFEEMLDAGVRPTHKAYNILL 313
++ LI YGK + E L + E+M++ V P K+Y L+
Sbjct: 708 HTFLSLIKHLLEMKYGKQKGSEPELCAMSNMMEFDTVVELLEKMVEHSVTPNAKSYEKLI 767
Query: 314 DAFAISGMVDQARTVFKCMRRDR-CSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGF 372
G + A VF M+R+ SP + +LS A K + G
Sbjct: 768 LGICEVGNLRVAEKVFDHMQRNEGISPSELVFNALLSCCCKLKKHNEAAKVVDDMICVGH 827
Query: 373 VPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVV 432
+P + + LI G K E+ ++ + G ++ + I+D GK ++
Sbjct: 828 LPQLESCKVLICGLYKKGEKERGTSVFQNLLQCGYYEDELAWKIIIDGVGKQGLVEAFYE 887
Query: 433 WYKEMESCGFPPDQKAKNILL 453
+ ME G + ++L+
Sbjct: 888 LFNVMEKNGCKFSSQTYSLLI 908
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 42/182 (23%), Positives = 94/182 (51%)
Query: 308 AYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRL 367
YN LL++ A G+VD+ + V+ M D+ P+I +Y M++ Y ++E A ++ ++
Sbjct: 185 CYNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKI 244
Query: 368 KQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDF 427
+ G P+ TY +LI GY + +L+ +++++M + G + N+ +T ++ +
Sbjct: 245 VEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRI 304
Query: 428 DSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGINGLSIS 487
D A+ + +M+ P + +L+ ++ ++EA L+ +P I+ ++
Sbjct: 305 DEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVL 364
Query: 488 VD 489
+D
Sbjct: 365 ID 366
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 72/306 (23%), Positives = 127/306 (41%), Gaps = 54/306 (17%)
Query: 99 FLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQ 158
+ I Y ++G AE +++ M + G +P + ++++L++ YG G+ A + +RM+
Sbjct: 640 YTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMR 699
Query: 159 SSGPRPSALTYQIILKLFVEA----NKFKEAEEVFMTLLDE--------EK---SPLKPD 203
+G PS T+ ++K +E K E E M+ + E EK + P+
Sbjct: 700 DTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPELCAMSNMMEFDTVVELLEKMVEHSVTPN 759
Query: 204 QKMFHMMIYMYKKAGGYEKARKLFALMAE-RGVQQSTVTYNSLMSFETNYK---EVSKIY 259
K + +I + G A K+F M G+ S + +N+L+S K E +K+
Sbjct: 760 AKSYEKLILGICEVGNLRVAEKVFDHMQRNEGISPSELVFNALLSCCCKLKKHNEAAKVV 819
Query: 260 DQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAIS 319
D M G P + S +LI K +E +VF+ +L G A+ I++D
Sbjct: 820 DDMICVGHLPQLESCKVLICGLYKKGEKERGTSVFQNLLQCGYYEDELAWKIIIDGVGKQ 879
Query: 320 GMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITY 379
G+V+ +F M ++ C KF + TY
Sbjct: 880 GLVEAFYELFNVMEKNGC------------------------KFSSQ-----------TY 904
Query: 380 GTLIKG 385
LI+G
Sbjct: 905 SLLIEG 910
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 75/348 (21%), Positives = 140/348 (40%), Gaps = 25/348 (7%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + F LI G +A + M K G P+V + T L+ + G + +A + F
Sbjct: 566 NSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRF 625
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
++M SSG +P A TY ++ + + +AE++ + ++ + PD + +I Y
Sbjct: 626 QQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKM---RENGVSPDLFTYSSLIKGY 682
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSL---------------------MSFETNYK 253
G A + M + G + S T+ SL MS +
Sbjct: 683 GDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPELCAMSNMMEFD 742
Query: 254 EVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEM-LDAGVRPTHKAYNIL 312
V ++ ++M + P+ SY LI + A VF+ M + G+ P+ +N L
Sbjct: 743 TVVELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGISPSELVFNAL 802
Query: 313 LDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGF 372
L ++A V M P + S ++ + E F+ L Q G+
Sbjct: 803 LSCCCKLKKHNEAAKVVDDMICVGHLPQLESCKVLICGLYKKGEKERGTSVFQNLLQCGY 862
Query: 373 VPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDA 420
+ + + +I G K +E E+++ M NG K + ++ +++
Sbjct: 863 YEDELAWKIIIDGVGKQGLVEAFYELFNVMEKNGCKFSSQTYSLLIEG 910
>gi|302767472|ref|XP_002967156.1| hypothetical protein SELMODRAFT_144844 [Selaginella moellendorffii]
gi|300165147|gb|EFJ31755.1| hypothetical protein SELMODRAFT_144844 [Selaginella moellendorffii]
Length = 651
Score = 141 bits (356), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 88/351 (25%), Positives = 166/351 (47%), Gaps = 8/351 (2%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N+ + +LI + GD + A ++L M G+ + V HT LM+ GR A F
Sbjct: 8 NKFTYGILIRGFSSAGDLDIAIQLLEEMKSNGFEGNAVVHTTLMKGLCDAGRVVEALEHF 67
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
R M P +TY ++ +A KF EA+ + ++ +P D F +I
Sbjct: 68 RAMAKDCA-PDVMTYTALVHALCKAGKFDEAQGMLREMIARGCAP---DTVTFSTLIDGL 123
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETN-YKEV---SKIYDQMQRAGLQPD 270
K G E+A ++ + +RG+ S + +++ N Y V SK+ + G P
Sbjct: 124 CKFGSEEQAFRVLEDVIQRGMGNSDAAFETIIQRLCNKYNSVELASKVLGVVIAKGFTPT 183
Query: 271 VVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFK 330
V+ + L+IN + KA+ + A + E M++ G P + IL+ + V +A+ + +
Sbjct: 184 VLMFNLVINGFCKAKDLDSAYKLLEVMIEKGCVPNVFTFTILITGLCKANRVGEAQQLLE 243
Query: 331 CMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVN 390
M CSP++ +Y+T+++ ++ A + F+ +++ PNV+T+ LI G K
Sbjct: 244 KMVTGGCSPNVVTYSTVINGLCKQGQVDDAYELFQLMERRNCPPNVVTHNILIDGLCKAK 303
Query: 391 NLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCG 441
+E+ ++Y +MR G P+ + +++D K+ D A ++ + G
Sbjct: 304 RIEEARQLYHRMRETGCAPDIITYNSLIDGLCKSFQVDEAFQLFQTIPESG 354
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 92/409 (22%), Positives = 186/409 (45%), Gaps = 12/409 (2%)
Query: 58 LPKDLVLGTLVR-LKQLKKWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAE 116
+P G L+R ++ ++LE ++ + ++ N + L+ G +A
Sbjct: 6 MPNKFTYGILIRGFSSAGDLDIAIQLLEEMK-SNGFEGNAVVHTTLMKGLCDAGRVVEAL 64
Query: 117 KVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLF 176
+ M K AP V+++TAL+ A + G++ A+ + R M + G P +T+ ++
Sbjct: 65 EHFRAMAKD-CAPDVMTYTALVHALCKAGKFDEAQGMLREMIARGCAPDTVTFSTLIDGL 123
Query: 177 VEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIY-MYKKAGGYEKARKLFALMAERGV 235
KF E+ F L D + + F +I + K E A K+ ++ +G
Sbjct: 124 C---KFGSEEQAFRVLEDVIQRGMGNSDAAFETIIQRLCNKYNSVELASKVLGVVIAKGF 180
Query: 236 QQSTVTYNSLMSFETNYKEVS---KIYDQMQRAGLQPDVVSYALLINAYGKARREEEALA 292
+ + +N +++ K++ K+ + M G P+V ++ +LI KA R EA
Sbjct: 181 TPTVLMFNLVINGFCKAKDLDSAYKLLEVMIEKGCVPNVFTFTILITGLCKANRVGEAQQ 240
Query: 293 VFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYV 352
+ E+M+ G P Y+ +++ G VD A +F+ M R C P++ ++ ++
Sbjct: 241 LLEKMVTGGCSPNVVTYSTVINGLCKQGQVDDAYELFQLMERRNCPPNVVTHNILIDGLC 300
Query: 353 NASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIK-PNQ 411
A +E A + + R+++ G P++ITY +LI G K +++ +++ + +G+ N
Sbjct: 301 KAKRIEEARQLYHRMRETGCAPDIITYNSLIDGLCKSFQVDEAFQLFQTIPESGVSAANA 360
Query: 412 TIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKA-KNILLSLAKTA 459
++T+ Y A + + GF PD +++L KT+
Sbjct: 361 VTYSTLFHGYAALGRMADACRIFSMLVDKGFSPDLATYTSLILEYCKTS 409
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 85/373 (22%), Positives = 169/373 (45%), Gaps = 14/373 (3%)
Query: 115 AEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILK 174
A KVL + KG+ P+V+ ++ + + +A + M G P+ T+ I++
Sbjct: 168 ASKVLGVVIAKGFTPTVLMFNLVINGFCKAKDLDSAYKLLEVMIEKGCVPNVFTFTILIT 227
Query: 175 LFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERG 234
+AN+ EA+++ ++ SP + + +I K G + A +LF LM R
Sbjct: 228 GLCKANRVGEAQQLLEKMVTGGCSP---NVVTYSTVINGLCKQGQVDDAYELFQLMERRN 284
Query: 235 VQQSTVTYNSLMSFETNYK---EVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEAL 291
+ VT+N L+ K E ++Y +M+ G PD+++Y LI+ K+ + +EA
Sbjct: 285 CPPNVVTHNILIDGLCKAKRIEEARQLYHRMRETGCAPDIITYNSLIDGLCKSFQVDEAF 344
Query: 292 AVFEEMLDAGVRPTHKA-YNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSA 350
+F+ + ++GV + Y+ L +A G + A +F + SPD+ +YT+++
Sbjct: 345 QLFQTIPESGVSAANAVTYSTLFHGYAALGRMADACRIFSMLVDKGFSPDLATYTSLILE 404
Query: 351 YVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPN 410
Y S + + GF P V T ++ G + N+ E+ ++++D M G +
Sbjct: 405 YCKTSRAVEVVELVEEMASKGFPPRVNTLSAVLGGLFEGNHTERAIQLFDSMAARGCTDD 464
Query: 411 QTIFTTIMDAYGKNKDFDSAVVWYKEM---ESCGFPPDQKAKNILLSLAKTADERNEANE 467
I+ +++ + + A+ +++ F P A + L+ ++A +
Sbjct: 465 ALIYNLVVEGMARASKHNKALAVLEQVIDKRDRKFNPSSSAVDALVESLCQVGRTDDAKQ 524
Query: 468 LLGNFNHPNNEPG 480
LL H +E G
Sbjct: 525 LL----HKMSERG 533
Score = 109 bits (272), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 88/423 (20%), Positives = 176/423 (41%), Gaps = 80/423 (18%)
Query: 68 VRLKQLKKWNVVSEVLEWLR--IQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKK 125
+ + L K N V E + L + N + + +I KQG + A ++ M ++
Sbjct: 224 ILITGLCKANRVGEAQQLLEKMVTGGCSPNVVTYSTVINGLCKQGQVDDAYELFQLMERR 283
Query: 126 GYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEA 185
P+VV+H L++ + R + A ++ RM+ +G P +TY ++ ++ + EA
Sbjct: 284 NCPPNVVTHNILIDGLCKAKRIEEARQLYHRMRETGCAPDIITYNSLIDGLCKSFQVDEA 343
Query: 186 EEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSL 245
++F T+ E + + + + Y G A ++F+++ ++G TY SL
Sbjct: 344 FQLFQTI--PESGVSAANAVTYSTLFHGYAALGRMADACRIFSMLVDKGFSPDLATYTSL 401
Query: 246 MS-------------------------------------FETNYKEVS-KIYDQMQRAGL 267
+ FE N+ E + +++D M G
Sbjct: 402 ILEYCKTSRAVEVVELVEEMASKGFPPRVNTLSAVLGGLFEGNHTERAIQLFDSMAARGC 461
Query: 268 QPDVVSYALLINAYGKARREEEALAVFEEMLDAGVR---PTHKAYNILLDAFA------- 317
D + Y L++ +A + +ALAV E+++D R P+ A + L+++
Sbjct: 462 TDDALIYNLVVEGMARASKHNKALAVLEQVIDKRDRKFNPSSSAVDALVESLCQVGRTDD 521
Query: 318 -----------------------ISGMV-----DQARTVFKCMRRDRCSPDICSYTTMLS 349
+SG+ D+A VF+ M +P+I + ++S
Sbjct: 522 AKQLLHKMSERGFAAAVSSYNGLLSGLSRLQRWDEATQVFEAMVSAGPAPEISTVNVVIS 581
Query: 350 AYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKP 409
+A+ ++ A + +R+ + G P++ T TLI GY K + ++ ++M G++P
Sbjct: 582 WLCSAAKVDDAYELVQRMSKLGCCPDIETCNTLIGGYCKSGRADLARKLLEEMTEAGLEP 641
Query: 410 NQT 412
N T
Sbjct: 642 NDT 644
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/294 (21%), Positives = 127/294 (43%), Gaps = 9/294 (3%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + + L Y G A ++ S + KG++P + ++T+L+ Y + R +
Sbjct: 359 NAVTYSTLFHGYAALGRMADACRIFSMLVDKGFSPDLATYTSLILEYCKTSRAVEVVELV 418
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
M S G P T +L E N + A ++F ++ D ++++++
Sbjct: 419 EEMASKGFPPRVNTLSAVLGGLFEGNHTERAIQLFDSM---AARGCTDDALIYNLVVEGM 475
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSKIYD------QMQRAGLQ 268
+A + KA + + ++ ++ + +++ + + +V + D +M G
Sbjct: 476 ARASKHNKALAVLEQVIDKRDRKFNPSSSAVDALVESLCQVGRTDDAKQLLHKMSERGFA 535
Query: 269 PDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTV 328
V SY L++ + +R +EA VFE M+ AG P N+++ + VD A +
Sbjct: 536 AAVSSYNGLLSGLSRLQRWDEATQVFEAMVSAGPAPEISTVNVVISWLCSAAKVDDAYEL 595
Query: 329 FKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTL 382
+ M + C PDI + T++ Y + + A K + + G PN T+ L
Sbjct: 596 VQRMSKLGCCPDIETCNTLIGGYCKSGRADLARKLLEEMTEAGLEPNDTTHDLL 649
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 71/319 (22%), Positives = 130/319 (40%), Gaps = 40/319 (12%)
Query: 202 PDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSKIYDQ 261
P++ + ++I + AG + A +L M G + + V + +LM + V + +
Sbjct: 7 PNKFTYGILIRGFSSAGDLDIAIQLLEEMKSNGFEGNAVVHTTLMKGLCDAGRVVEALEH 66
Query: 262 MQRAG--LQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAIS 319
+ PDV++Y L++A KA + +EA + EM+ G P ++ L+D
Sbjct: 67 FRAMAKDCAPDVMTYTALVHALCKAGKFDEAQGMLREMIARGCAPDTVTFSTLIDGLCKF 126
Query: 320 GMVDQA-RTVFKCMRRDRCSPDICSYTTMLSAYVNA-SDMEGAEKFFRRLKQDGFVPNVI 377
G +QA R + ++R + D ++ T++ N + +E A K + GF P V+
Sbjct: 127 GSEEQAFRVLEDVIQRGMGNSDA-AFETIIQRLCNKYNSVELASKVLGVVIAKGFTPTVL 185
Query: 378 TYGTLIKGYAKVNNLE---KMMEI--------------------------------YDKM 402
+ +I G+ K +L+ K++E+ +KM
Sbjct: 186 MFNLVINGFCKAKDLDSAYKLLEVMIEKGCVPNVFTFTILITGLCKANRVGEAQQLLEKM 245
Query: 403 RVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADER 462
G PN ++T+++ K D A ++ ME PP+ NIL+ A
Sbjct: 246 VTGGCSPNVVTYSTVINGLCKQGQVDDAYELFQLMERRNCPPNVVTHNILIDGLCKAKRI 305
Query: 463 NEANELLGNFNHPNNEPGI 481
EA +L P I
Sbjct: 306 EEARQLYHRMRETGCAPDI 324
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/117 (24%), Positives = 55/117 (47%), Gaps = 1/117 (0%)
Query: 337 CSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMM 396
C P+ +Y ++ + +A D++ A + +K +GF N + + TL+KG + + +
Sbjct: 5 CMPNKFTYGILIRGFSSAGDLDIAIQLLEEMKSNGFEGNAVVHTTLMKGLCDAGRVVEAL 64
Query: 397 EIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILL 453
E + M P+ +T ++ A K FD A +EM + G PD + L+
Sbjct: 65 EHFRAM-AKDCAPDVMTYTALVHALCKAGKFDEAQGMLREMIARGCAPDTVTFSTLI 120
>gi|302786208|ref|XP_002974875.1| hypothetical protein SELMODRAFT_150113 [Selaginella moellendorffii]
gi|300157770|gb|EFJ24395.1| hypothetical protein SELMODRAFT_150113 [Selaginella moellendorffii]
Length = 382
Score = 141 bits (356), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 82/323 (25%), Positives = 162/323 (50%), Gaps = 10/323 (3%)
Query: 129 PSVVSHTALMEAYGRGGRYKNAEAIFRRMQSS-GPRPSALTYQIILKLFVEANKFKEAEE 187
P VVS+T L+ + GR A +FR+M ++ G RP+A TY ++ + ++ A
Sbjct: 44 PDVVSYTTLINGLCKLGRVDAAFDLFRKMVAAGGCRPNAFTYNALVDGLCKQDRLDAARA 103
Query: 188 VFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMS 247
V + + K PD ++ ++ + G ++A F M E G + V++N++++
Sbjct: 104 V---IAEARKRDFAPDVVTYNTLMAALFQLGRVDEALATFTQMTEEGYVPTLVSFNAIIT 160
Query: 248 FETNYKEVS---KIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRP 304
+ ++ +++++M P++V+Y+++I+ K+ + +EA + + M+ G RP
Sbjct: 161 GLCRARRLADALEVFNEMIDRDFHPNLVTYSVVIDGLCKSDQLDEAQQLLDRMVSEGCRP 220
Query: 305 THKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFF 364
AY L+ F+ +G +D A + + M C PD+ +YT ++ ++ A + F
Sbjct: 221 DLVAYTPLVLGFSAAGRLDSALGLLRRMVSQGCIPDVVTYTVVIDKLCKVGRVDDAHEIF 280
Query: 365 RRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKN 424
R L + PNV+TY LI GY + + +++ ++ MR +PN + T++
Sbjct: 281 RELVANKCSPNVVTYSALIGGYCRASRVDEGGKV---MREMACRPNVVTYNTMIWGLSMV 337
Query: 425 KDFDSAVVWYKEMESCGFPPDQK 447
+ A ++EM CGF PD +
Sbjct: 338 DRNEEAYGMFREMSECGFVPDAR 360
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 77/300 (25%), Positives = 136/300 (45%), Gaps = 9/300 (3%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + L+ KQ + A V++ K+ +AP VV++ LM A + GR A A F
Sbjct: 81 NAFTYNALVDGLCKQDRLDAARAVIAEARKRDFAPDVVTYNTLMAALFQLGRVDEALATF 140
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
+M G P+ +++ I+ A + +A EVF ++D + P+ + ++I
Sbjct: 141 TQMTEEGYVPTLVSFNAIITGLCRARRLADALEVFNEMIDRD---FHPNLVTYSVVIDGL 197
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSLM---SFETNYKEVSKIYDQMQRAGLQPDV 271
K+ ++A++L M G + V Y L+ S + +M G PDV
Sbjct: 198 CKSDQLDEAQQLLDRMVSEGCRPDLVAYTPLVLGFSAAGRLDSALGLLRRMVSQGCIPDV 257
Query: 272 VSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKC 331
V+Y ++I+ K R ++A +F E++ P Y+ L+ + + VD+ V
Sbjct: 258 VTYTVVIDKLCKVGRVDDAHEIFRELVANKCSPNVVTYSALIGGYCRASRVDEGGKV--- 314
Query: 332 MRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNN 391
MR C P++ +Y TM+ E A FR + + GFVP+ TY L + +++
Sbjct: 315 MREMACRPNVVTYNTMIWGLSMVDRNEEAYGMFREMSECGFVPDARTYRGLKRALRMIDH 374
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 63/231 (27%), Positives = 108/231 (46%), Gaps = 1/231 (0%)
Query: 261 QMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAG-VRPTHKAYNILLDAFAIS 319
++ A QPDVVSY LIN K R + A +F +M+ AG RP YN L+D
Sbjct: 36 SLELAHAQPDVVSYTTLINGLCKLGRVDAAFDLFRKMVAAGGCRPNAFTYNALVDGLCKQ 95
Query: 320 GMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITY 379
+D AR V R+ +PD+ +Y T+++A ++ A F ++ ++G+VP ++++
Sbjct: 96 DRLDAARAVIAEARKRDFAPDVVTYNTLMAALFQLGRVDEALATFTQMTEEGYVPTLVSF 155
Query: 380 GTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMES 439
+I G + L +E++++M PN ++ ++D K+ D A M S
Sbjct: 156 NAIITGLCRARRLADALEVFNEMIDRDFHPNLVTYSVVIDGLCKSDQLDEAQQLLDRMVS 215
Query: 440 CGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGINGLSISVDE 490
G PD A L+ A + A LL P + ++ +D+
Sbjct: 216 EGCRPDLVAYTPLVLGFSAAGRLDSALGLLRRMVSQGCIPDVVTYTVVIDK 266
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 78/182 (42%), Gaps = 6/182 (3%)
Query: 301 GVRPTHKAYNILLDAFAISGMVDQARTVF-KCMRRDRCSPDICSYTTMLSAYVNASDMEG 359
G++ + +I+L G V QA F + PD+ SYTT+++ ++
Sbjct: 5 GMQCNDRTTSIILQGLCRCGRVAQALEHFDASLELAHAQPDVVSYTTLINGLCKLGRVDA 64
Query: 360 AEKFFRRL-KQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIM 418
A FR++ G PN TY L+ G K + L+ + + R P+ + T+M
Sbjct: 65 AFDLFRKMVAAGGCRPNAFTYNALVDGLCKQDRLDAARAVIAEARKRDFAPDVVTYNTLM 124
Query: 419 DAYGKNKDFDSAVVWYKEMESCGFPPDQKAKN-ILLSLAKT---ADERNEANELLGNFNH 474
A + D A+ + +M G+ P + N I+ L + AD NE++ H
Sbjct: 125 AALFQLGRVDEALATFTQMTEEGYVPTLVSFNAIITGLCRARRLADALEVFNEMIDRDFH 184
Query: 475 PN 476
PN
Sbjct: 185 PN 186
>gi|225456802|ref|XP_002275673.1| PREDICTED: pentatricopeptide repeat-containing protein At5g50280,
chloroplastic [Vitis vinifera]
gi|147821419|emb|CAN76897.1| hypothetical protein VITISV_010606 [Vitis vinifera]
Length = 692
Score = 141 bits (356), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 108/415 (26%), Positives = 191/415 (46%), Gaps = 48/415 (11%)
Query: 103 ITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRY-KNAEAIFRRMQSSG 161
I+ G ++ A KV M P V+ + ++ + G K+A F+RM G
Sbjct: 249 ISGLSSCGRYDDAWKVYDEMETNNIRPDHVTCSIMITVMRKDGHSAKDAWEFFQRMNRKG 308
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
+ S ++K F + EA + + EK + + +++ ++ Y K+ E
Sbjct: 309 VKWSLEVLGALIKSFCDEGLKNEA---LIIQSEMEKKGISSNAIVYNTLMDAYSKSNRVE 365
Query: 222 KARKLFALMAERGVQQSTVTYNSLM---SFETNYKEVSKIYDQMQRAGLQPDVVSYALLI 278
+A LF M +GV ++ TYN LM S + + + +MQ GL+P+V SY LI
Sbjct: 366 EAEGLFGEMKAKGVMPTSATYNILMDAYSRRMQPEIIENLLLEMQDMGLEPNVKSYTCLI 425
Query: 279 NAYGKARREEEALA-VFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRC 337
+AYG+ ++ + A F M G++PT +Y L+ A+++ G ++A T F+ M+R+
Sbjct: 426 SAYGRQKKMSDMAADAFLRMKKVGIKPTSHSYTALIHAYSVGGWHEKAYTAFENMKREGI 485
Query: 338 SPDICSYTTMLSAYVNASDMEGAEKFFRRLKQD--------------------------- 370
P I +YT +L A+ A D + K ++ + D
Sbjct: 486 KPSIETYTALLDAFRRAGDTQTLMKIWKLMLSDKIEGTRVTFNILLDGFAKQGHYMEARD 545
Query: 371 --------GFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYG 422
GF P V+TY L+ YA+ ++ ++ +M +KP+ ++T++ AY
Sbjct: 546 VIFEFGKIGFQPTVMTYNMLMNAYARGGQHSRLPQLLKEMTSLNLKPDSITYSTMIYAYV 605
Query: 423 KNKDFDSAVVWYKEMESCGFPPD----QKAKNILLSLAKTADERNEANELLGNFN 473
+ +DF A ++K+M G PD QK ++IL A T + R + + +LG N
Sbjct: 606 RVRDFKRAFFYHKQMVKSGQVPDPQSYQKLRSILDVKAATKN-RKDRSAILGIVN 659
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 99/362 (27%), Positives = 165/362 (45%), Gaps = 13/362 (3%)
Query: 129 PSVVSHTA---LMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEA 185
PS+V+ A L GR G + + R + + Y + ++ +A
Sbjct: 202 PSLVTARACSLLFPMLGRAGMGDDLMVLLRNLPKTRQFRDVRIYNSAISGLSSCGRYDDA 261
Query: 186 EEVFMTLLDE-EKSPLKPDQKMFHMMIYMYKKAGGYEK-ARKLFALMAERGVQQSTVTYN 243
+V+ DE E + ++PD +MI + +K G K A + F M +GV+ S
Sbjct: 262 WKVY----DEMETNNIRPDHVTCSIMITVMRKDGHSAKDAWEFFQRMNRKGVKWSLEVLG 317
Query: 244 SLM-SF--ETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDA 300
+L+ SF E E I +M++ G+ + + Y L++AY K+ R EEA +F EM
Sbjct: 318 ALIKSFCDEGLKNEALIIQSEMEKKGISSNAIVYNTLMDAYSKSNRVEEAEGLFGEMKAK 377
Query: 301 GVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDM-EG 359
GV PT YNIL+DA++ + + M+ P++ SYT ++SAY M +
Sbjct: 378 GVMPTSATYNILMDAYSRRMQPEIIENLLLEMQDMGLEPNVKSYTCLISAYGRQKKMSDM 437
Query: 360 AEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMD 419
A F R+K+ G P +Y LI Y+ EK ++ M+ GIKP+ +T ++D
Sbjct: 438 AADAFLRMKKVGIKPTSHSYTALIHAYSVGGWHEKAYTAFENMKREGIKPSIETYTALLD 497
Query: 420 AYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEP 479
A+ + D + + +K M S + NILL EA +++ F +P
Sbjct: 498 AFRRAGDTQTLMKIWKLMLSDKIEGTRVTFNILLDGFAKQGHYMEARDVIFEFGKIGFQP 557
Query: 480 GI 481
+
Sbjct: 558 TV 559
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 94/425 (22%), Positives = 183/425 (43%), Gaps = 21/425 (4%)
Query: 60 KDLVLGTLVRLKQLKKWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVL 119
+DLV+G L EW+ +Q +L G+ G + +L
Sbjct: 184 EDLVMGCLY-------------FFEWMGLQEPSLVTARACSLLFPMLGRAGMGDDLMVLL 230
Query: 120 SFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLF-VE 178
+ K V + + + GRY +A ++ M+++ RP +T I++ + +
Sbjct: 231 RNLPKTRQFRDVRIYNSAISGLSSCGRYDDAWKVYDEMETNNIRPDHVTCSIMITVMRKD 290
Query: 179 ANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQS 238
+ K+A E F + + +K ++ +I + G +A + + M ++G+ +
Sbjct: 291 GHSAKDAWEFFQRM---NRKGVKWSLEVLGALIKSFCDEGLKNEALIIQSEMEKKGISSN 347
Query: 239 TVTYNSLM---SFETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFE 295
+ YN+LM S +E ++ +M+ G+ P +Y +L++AY + + E +
Sbjct: 348 AIVYNTLMDAYSKSNRVEEAEGLFGEMKAKGVMPTSATYNILMDAYSRRMQPEIIENLLL 407
Query: 296 EMLDAGVRPTHKAYNILLDAFAISG-MVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNA 354
EM D G+ P K+Y L+ A+ M D A F M++ P SYT ++ AY
Sbjct: 408 EMQDMGLEPNVKSYTCLISAYGRQKKMSDMAADAFLRMKKVGIKPTSHSYTALIHAYSVG 467
Query: 355 SDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIF 414
E A F +K++G P++ TY L+ + + + + +M+I+ M + I+ + F
Sbjct: 468 GWHEKAYTAFENMKREGIKPSIETYTALLDAFRRAGDTQTLMKIWKLMLSDKIEGTRVTF 527
Query: 415 TTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNH 474
++D + K + A E GF P N+L++ + + +LL
Sbjct: 528 NILLDGFAKQGHYMEARDVIFEFGKIGFQPTVMTYNMLMNAYARGGQHSRLPQLLKEMTS 587
Query: 475 PNNEP 479
N +P
Sbjct: 588 LNLKP 592
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 48/87 (55%)
Query: 99 FLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQ 158
F +L+ + KQG + +A V+ K G+ P+V+++ LM AY RGG++ + + M
Sbjct: 527 FNILLDGFAKQGHYMEARDVIFEFGKIGFQPTVMTYNMLMNAYARGGQHSRLPQLLKEMT 586
Query: 159 SSGPRPSALTYQIILKLFVEANKFKEA 185
S +P ++TY ++ +V FK A
Sbjct: 587 SLNLKPDSITYSTMIYAYVRVRDFKRA 613
>gi|359473521|ref|XP_002273398.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g02150-like [Vitis vinifera]
Length = 755
Score = 141 bits (356), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 96/377 (25%), Positives = 180/377 (47%), Gaps = 6/377 (1%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + + I A+ K+G +A K M + P+ ++T+L++A + G A +
Sbjct: 359 NVVTYSTFIDAFCKEGMLQEAIKFFVDMRRVALTPNEFTYTSLIDANCKAGNLAEALKLV 418
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
+ +G + + +TY +L E + KEAEEVF +L+ + + P+Q+ + +++ +
Sbjct: 419 EEILQAGIKLNVVTYTALLDGLCEEGRMKEAEEVFRAMLN---AGVAPNQETYTALVHGF 475
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSLM---SFETNYKEVSKIYDQMQRAGLQPDV 271
KA E A+ + M E+ ++ + Y +++ E+ +E + +++ +G+ +
Sbjct: 476 IKAKEMEYAKDILKEMKEKCIKPDLLLYGTILWGLCNESRLEEAKLLIGEIKESGINTNA 535
Query: 272 VSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKC 331
V Y L++AY K+ + EAL + EEMLD G+ T Y L+D SG+V +A F
Sbjct: 536 VIYTTLMDAYFKSGQATEALTLLEEMLDLGLIATEVTYCALIDGLCKSGLVQEAMHHFGR 595
Query: 332 MRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNN 391
M P++ YT ++ + E A+K F + G +P+ I Y LI G K N
Sbjct: 596 MSEIGLQPNVAVYTALVDGLCKNNCFEVAKKLFDEMLDKGMMPDKIAYTALIDGNMKHGN 655
Query: 392 LEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNI 451
L++ + + D+M G++ + +T ++ + A EM G PD+
Sbjct: 656 LQEALNLRDRMIEIGMELDLHAYTALIWGLSHSGQVQKARNLLDEMIGKGVLPDEVVYMC 715
Query: 452 LLSLAKTADERNEANEL 468
L+ + +EA EL
Sbjct: 716 LIKKYYALGKVDEALEL 732
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 95/389 (24%), Positives = 174/389 (44%), Gaps = 35/389 (8%)
Query: 101 MLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSS 160
++I K+GD A + + M + G+ P +V++ +L++ +G+ G IF +M+ +
Sbjct: 260 IMIDYLCKEGDLEMARSLFTQMKEAGFTPDIVTYNSLIDGHGKLGLLDECICIFEQMKDA 319
Query: 161 GPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGY 220
P +TY ++ F KF+ + F L + + + LKP+ + I + K G
Sbjct: 320 DCDPDVITYNALINCFC---KFERMPKAFEFLHEMKANGLKPNVVTYSTFIDAFCKEGML 376
Query: 221 EKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSKIYDQMQRAGLQPDVVSYALLINA 280
++A K + M+R L P+ +Y LI+A
Sbjct: 377 QEA--------------------------------IKFFVDMRRVALTPNEFTYTSLIDA 404
Query: 281 YGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPD 340
KA EAL + EE+L AG++ Y LLD G + +A VF+ M +P+
Sbjct: 405 NCKAGNLAEALKLVEEILQAGIKLNVVTYTALLDGLCEEGRMKEAEEVFRAMLNAGVAPN 464
Query: 341 ICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYD 400
+YT ++ ++ A +ME A+ + +K+ P+++ YGT++ G + LE+ +
Sbjct: 465 QETYTALVHGFIKAKEMEYAKDILKEMKEKCIKPDLLLYGTILWGLCNESRLEEAKLLIG 524
Query: 401 KMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTAD 460
+++ +GI N I+TT+MDAY K+ A+ +EM G + L+ +
Sbjct: 525 EIKESGINTNAVIYTTLMDAYFKSGQATEALTLLEEMLDLGLIATEVTYCALIDGLCKSG 584
Query: 461 ERNEANELLGNFNHPNNEPGINGLSISVD 489
EA G + +P + + VD
Sbjct: 585 LVQEAMHHFGRMSEIGLQPNVAVYTALVD 613
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 117/424 (27%), Positives = 175/424 (41%), Gaps = 49/424 (11%)
Query: 63 VLGTLVRLKQ-LKKWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSF 121
VL L+ L++ L W+V ++L R F D L +A + G +A +
Sbjct: 154 VLKELICLRRVLPSWDVF-DLLWATRNVCVPGFGVFD--ALFSALIELGMLEEASECFLK 210
Query: 122 MNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANK 181
M K P S AL+ + GR + F+ M ++G + S TY I
Sbjct: 211 MRKFRVFPKPRSCNALLHRLSKVGRGDLSRKFFKDMGAAGIKRSVFTYNI---------- 260
Query: 182 FKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVT 241
MI K G E AR LF M E G VT
Sbjct: 261 ----------------------------MIDYLCKEGDLEMARSLFTQMKEAGFTPDIVT 292
Query: 242 YNSLMSFETNY---KEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEML 298
YNSL+ E I++QM+ A PDV++Y LIN + K R +A EM
Sbjct: 293 YNSLIDGHGKLGLLDECICIFEQMKDADCDPDVITYNALINCFCKFERMPKAFEFLHEMK 352
Query: 299 DAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDME 358
G++P Y+ +DAF GM+ +A F MRR +P+ +YT+++ A A ++
Sbjct: 353 ANGLKPNVVTYSTFIDAFCKEGMLQEAIKFFVDMRRVALTPNEFTYTSLIDANCKAGNLA 412
Query: 359 GAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIM 418
A K + Q G NV+TY L+ G + +++ E++ M G+ PNQ +T ++
Sbjct: 413 EALKLVEEILQAGIKLNVVTYTALLDGLCEEGRMKEAEEVFRAMLNAGVAPNQETYTALV 472
Query: 419 DAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNE 478
+ K K+ + A KEM+ PD +L EA L+G E
Sbjct: 473 HGFIKAKEMEYAKDILKEMKEKCIKPDLLLYGTILWGLCNESRLEEAKLLIGEI----KE 528
Query: 479 PGIN 482
GIN
Sbjct: 529 SGIN 532
Score = 122 bits (305), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 86/346 (24%), Positives = 168/346 (48%), Gaps = 6/346 (1%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
NE + LI A K G+ +A K++ + + G +VV++TAL++ GR K AE +F
Sbjct: 394 NEFTYTSLIDANCKAGNLAEALKLVEEILQAGIKLNVVTYTALLDGLCEEGRMKEAEEVF 453
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
R M ++G P+ TY ++ F++A + + A+++ L + ++ +KPD ++ +++
Sbjct: 454 RAMLNAGVAPNQETYTALVHGFIKAKEMEYAKDI---LKEMKEKCIKPDLLLYGTILWGL 510
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSLMS--FET-NYKEVSKIYDQMQRAGLQPDV 271
E+A+ L + E G+ + V Y +LM F++ E + ++M GL
Sbjct: 511 CNESRLEEAKLLIGEIKESGINTNAVIYTTLMDAYFKSGQATEALTLLEEMLDLGLIATE 570
Query: 272 VSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKC 331
V+Y LI+ K+ +EA+ F M + G++P Y L+D + + A+ +F
Sbjct: 571 VTYCALIDGLCKSGLVQEAMHHFGRMSEIGLQPNVAVYTALVDGLCKNNCFEVAKKLFDE 630
Query: 332 MRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNN 391
M PD +YT ++ + +++ A R+ + G ++ Y LI G +
Sbjct: 631 MLDKGMMPDKIAYTALIDGNMKHGNLQEALNLRDRMIEIGMELDLHAYTALIWGLSHSGQ 690
Query: 392 LEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEM 437
++K + D+M G+ P++ ++ ++ Y D A+ EM
Sbjct: 691 VQKARNLLDEMIGKGVLPDEVVYMCLIKKYYALGKVDEALELQNEM 736
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 73/324 (22%), Positives = 141/324 (43%), Gaps = 35/324 (10%)
Query: 88 IQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRY 147
+Q+ N + + L+ ++G +AE+V M G AP+ ++TAL+ + +
Sbjct: 422 LQAGIKLNVVTYTALLDGLCEEGRMKEAEEVFRAMLNAGVAPNQETYTALVHGFIKAKEM 481
Query: 148 KNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAE---------------EVFMTL 192
+ A+ I + M+ +P L Y IL ++ +EA+ ++ TL
Sbjct: 482 EYAKDILKEMKEKCIKPDLLLYGTILWGLCNESRLEEAKLLIGEIKESGINTNAVIYTTL 541
Query: 193 LD------EEKSPLKPDQKMFHM-----------MIYMYKKAGGYEKARKLFALMAERGV 235
+D + L ++M + +I K+G ++A F M+E G+
Sbjct: 542 MDAYFKSGQATEALTLLEEMLDLGLIATEVTYCALIDGLCKSGLVQEAMHHFGRMSEIGL 601
Query: 236 QQSTVTYNSLMS--FETNYKEVSK-IYDQMQRAGLQPDVVSYALLINAYGKARREEEALA 292
Q + Y +L+ + N EV+K ++D+M G+ PD ++Y LI+ K +EAL
Sbjct: 602 QPNVAVYTALVDGLCKNNCFEVAKKLFDEMLDKGMMPDKIAYTALIDGNMKHGNLQEALN 661
Query: 293 VFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYV 352
+ + M++ G+ AY L+ + SG V +AR + M PD Y ++ Y
Sbjct: 662 LRDRMIEIGMELDLHAYTALIWGLSHSGQVQKARNLLDEMIGKGVLPDEVVYMCLIKKYY 721
Query: 353 NASDMEGAEKFFRRLKQDGFVPNV 376
++ A + + + G + +
Sbjct: 722 ALGKVDEALELQNEMAKRGMITGL 745
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/244 (21%), Positives = 97/244 (39%), Gaps = 18/244 (7%)
Query: 264 RAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAG------------------VRPT 305
R G Q +Y +L++ AR +A AV +E++ P
Sbjct: 125 RIGFQHTSEAYCILVHILFCARFYSDANAVLKELICLRRVLPSWDVFDLLWATRNVCVPG 184
Query: 306 HKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFR 365
++ L A GM+++A F MR+ R P S +L + + KFF+
Sbjct: 185 FGVFDALFSALIELGMLEEASECFLKMRKFRVFPKPRSCNALLHRLSKVGRGDLSRKFFK 244
Query: 366 RLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNK 425
+ G +V TY +I K +LE ++ +M+ G P+ + +++D +GK
Sbjct: 245 DMGAAGIKRSVFTYNIMIDYLCKEGDLEMARSLFTQMKEAGFTPDIVTYNSLIDGHGKLG 304
Query: 426 DFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGINGLS 485
D + +++M+ PD N L++ + +A E L +P + S
Sbjct: 305 LLDECICIFEQMKDADCDPDVITYNALINCFCKFERMPKAFEFLHEMKANGLKPNVVTYS 364
Query: 486 ISVD 489
+D
Sbjct: 365 TFID 368
>gi|413924821|gb|AFW64753.1| hypothetical protein ZEAMMB73_344298 [Zea mays]
Length = 698
Score = 141 bits (356), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 85/340 (25%), Positives = 161/340 (47%), Gaps = 7/340 (2%)
Query: 101 MLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSS 160
+LI Y ++GD + +L M KG P+VV++ A++ GR G E++ M++
Sbjct: 121 VLIDGYCRRGDIGRGLLLLGEMETKGIIPTVVTYGAIIHWLGRKGDLTKVESLLGEMRAR 180
Query: 161 GPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGY 220
G P+ Y ++ + +A ++ ++ KS PD F+ MI + + G
Sbjct: 181 GLSPNVQIYNTVINALCKCRSASQASDMLNQMV---KSRFNPDVVTFNTMIAGFCREGDV 237
Query: 221 EKARKLFALMAERGVQQSTVTYNSLMSFETNYKE---VSKIYDQMQRAGLQPDVVSYALL 277
+A KL RG++ + ++Y L+ E S + +M G PD+++ L
Sbjct: 238 REALKLLREAIRRGLEPNQLSYTPLIHGFCVRGEAMVASDLLVEMMGRGHTPDMITLGAL 297
Query: 278 INAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRC 337
I+ + + +AL V E+M + V P YN+L+ M+ A+ + + M +
Sbjct: 298 IHGLVVSGQVNDALIVREKMAERQVMPDANIYNVLISGLCKKRMLSAAKNLLEEMLEQKV 357
Query: 338 SPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMME 397
PD YTT++ +V + + A K F +++ P+++ Y +IKGY K +++ +
Sbjct: 358 QPDKFIYTTLIDGFVRSDKLSDARKIFEFMEEKA-CPDIVAYNVMIKGYCKFGMMKEAVT 416
Query: 398 IYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEM 437
MR G P++ +TT++D Y K D +++ +M
Sbjct: 417 CMSSMRKAGCIPDEFTYTTLVDGYAKKGDISASLRLLCDM 456
Score = 124 bits (312), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 89/369 (24%), Positives = 172/369 (46%), Gaps = 10/369 (2%)
Query: 46 AVLRSERTRGQPLPKDLVLGTLVR-LKQLKKWNVVSEVLEWLRIQSWWDFNEMDFLMLIT 104
++L R RG P + T++ L + + + S++L + ++S ++ + + F +I
Sbjct: 172 SLLGEMRARGLS-PNVQIYNTVINALCKCRSASQASDMLNQM-VKSRFNPDVVTFNTMIA 229
Query: 105 AYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRP 164
+ ++GD +A K+L ++G P+ +S+T L+ + G A + M G P
Sbjct: 230 GFCREGDVREALKLLREAIRRGLEPNQLSYTPLIHGFCVRGEAMVASDLLVEMMGRGHTP 289
Query: 165 SALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKAR 224
+T ++ V + + +A V + + + + PD +++++I K A+
Sbjct: 290 DMITLGALIHGLVVSGQVNDALIVREKMAERQ---VMPDANIYNVLISGLCKKRMLSAAK 346
Query: 225 KLFALMAERGVQQSTVTYNSLMSFETNYKEVS---KIYDQMQRAGLQPDVVSYALLINAY 281
L M E+ VQ Y +L+ ++S KI++ M+ PD+V+Y ++I Y
Sbjct: 347 NLLEEMLEQKVQPDKFIYTTLIDGFVRSDKLSDARKIFEFMEEKAC-PDIVAYNVMIKGY 405
Query: 282 GKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDI 341
K +EA+ M AG P Y L+D +A G + + + M + RC P+I
Sbjct: 406 CKFGMMKEAVTCMSSMRKAGCIPDEFTYTTLVDGYAKKGDISASLRLLCDMMKRRCKPNI 465
Query: 342 CSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDK 401
+Y +++ Y N D AE F +++ +G PNV+ Y LI K + + + ++
Sbjct: 466 FTYASLICGYCNIGDTYSAEDLFAKMQSEGLFPNVVHYTVLIGSLFKKDKVIQAAAYFEH 525
Query: 402 MRVNGIKPN 410
M +N PN
Sbjct: 526 MLLNHCPPN 534
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 95/419 (22%), Positives = 186/419 (44%), Gaps = 10/419 (2%)
Query: 40 EVGSAVAVLRSERTRGQPLPKDLVLGTLVR-LKQLKKWNVVSEVLEWLRIQSWWDFNEMD 98
++G + +L T+G +P + G ++ L + V +L +R + N
Sbjct: 131 DIGRGLLLLGEMETKGI-IPTVVTYGAIIHWLGRKGDLTKVESLLGEMRARGLSP-NVQI 188
Query: 99 FLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQ 158
+ +I A K ++A +L+ M K + P VV+ ++ + R G + A + R
Sbjct: 189 YNTVINALCKCRSASQASDMLNQMVKSRFNPDVVTFNTMIAGFCREGDVREALKLLREAI 248
Query: 159 SSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAG 218
G P+ L+Y ++ F + A ++ + ++ +P D +I+ +G
Sbjct: 249 RRGLEPNQLSYTPLIHGFCVRGEAMVASDLLVEMMGRGHTP---DMITLGALIHGLVVSG 305
Query: 219 GYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVS---KIYDQMQRAGLQPDVVSYA 275
A + MAER V YN L+S + +S + ++M +QPD Y
Sbjct: 306 QVNDALIVREKMAERQVMPDANIYNVLISGLCKKRMLSAAKNLLEEMLEQKVQPDKFIYT 365
Query: 276 LLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRD 335
LI+ + ++ + +A +FE M + P AYN+++ + GM+ +A T MR+
Sbjct: 366 TLIDGFVRSDKLSDARKIFEFMEEKAC-PDIVAYNVMIKGYCKFGMMKEAVTCMSSMRKA 424
Query: 336 RCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKM 395
C PD +YTT++ Y D+ + + + + PN+ TY +LI GY + +
Sbjct: 425 GCIPDEFTYTTLVDGYAKKGDISASLRLLCDMMKRRCKPNIFTYASLICGYCNIGDTYSA 484
Query: 396 MEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLS 454
+++ KM+ G+ PN +T ++ + K A +++ M PP+ + L++
Sbjct: 485 EDLFAKMQSEGLFPNVVHYTVLIGSLFKKDKVIQAAAYFEHMLLNHCPPNDATVHYLVN 543
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 57/271 (21%), Positives = 117/271 (43%), Gaps = 3/271 (1%)
Query: 202 PDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSF---ETNYKEVSKI 258
P ++++I Y + G + L M +G+ + VTY +++ + + + +V +
Sbjct: 114 PGAVFYNVLIDGYCRRGDIGRGLLLLGEMETKGIIPTVVTYGAIIHWLGRKGDLTKVESL 173
Query: 259 YDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAI 318
+M+ GL P+V Y +INA K R +A + +M+ + P +N ++ F
Sbjct: 174 LGEMRARGLSPNVQIYNTVINALCKCRSASQASDMLNQMVKSRFNPDVVTFNTMIAGFCR 233
Query: 319 SGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVIT 378
G V +A + + R P+ SYT ++ + + A + G P++IT
Sbjct: 234 EGDVREALKLLREAIRRGLEPNQLSYTPLIHGFCVRGEAMVASDLLVEMMGRGHTPDMIT 293
Query: 379 YGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEME 438
G LI G + + + +KM + P+ I+ ++ K + +A +EM
Sbjct: 294 LGALIHGLVVSGQVNDALIVREKMAERQVMPDANIYNVLISGLCKKRMLSAAKNLLEEML 353
Query: 439 SCGFPPDQKAKNILLSLAKTADERNEANELL 469
PD+ L+ +D+ ++A ++
Sbjct: 354 EQKVQPDKFIYTTLIDGFVRSDKLSDARKIF 384
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 53/240 (22%), Positives = 102/240 (42%), Gaps = 3/240 (1%)
Query: 218 GGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSK---IYDQMQRAGLQPDVVSY 274
G E+ R L G V YN L+ ++ + + +M+ G+ P VV+Y
Sbjct: 95 GRVEEGRGLIEARWGEGCVPGAVFYNVLIDGYCRRGDIGRGLLLLGEMETKGIIPTVVTY 154
Query: 275 ALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRR 334
+I+ G+ + ++ EM G+ P + YN +++A QA + M +
Sbjct: 155 GAIIHWLGRKGDLTKVESLLGEMRARGLSPNVQIYNTVINALCKCRSASQASDMLNQMVK 214
Query: 335 DRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEK 394
R +PD+ ++ TM++ + D+ A K R + G PN ++Y LI G+
Sbjct: 215 SRFNPDVVTFNTMIAGFCREGDVREALKLLREAIRRGLEPNQLSYTPLIHGFCVRGEAMV 274
Query: 395 MMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLS 454
++ +M G P+ ++ + + A++ ++M PD N+L+S
Sbjct: 275 ASDLLVEMMGRGHTPDMITLGALIHGLVVSGQVNDALIVREKMAERQVMPDANIYNVLIS 334
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/183 (23%), Positives = 80/183 (43%), Gaps = 2/183 (1%)
Query: 288 EEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTM 347
E A ++ EML + +++ + G V++ R + + + C P Y +
Sbjct: 63 ERARGLYGEMLVREGGADDYSTCVMVRGLCLEGRVEEGRGLIEARWGEGCVPGAVFYNVL 122
Query: 348 LSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGI 407
+ Y D+ ++ G +P V+TYG +I + +L K+ + +MR G+
Sbjct: 123 IDGYCRRGDIGRGLLLLGEMETKGIIPTVVTYGAIIHWLGRKGDLTKVESLLGEMRARGL 182
Query: 408 KPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLS-LAKTADERNEAN 466
PN I+ T+++A K + A +M F PD N +++ + D R EA
Sbjct: 183 SPNVQIYNTVINALCKCRSASQASDMLNQMVKSRFNPDVVTFNTMIAGFCREGDVR-EAL 241
Query: 467 ELL 469
+LL
Sbjct: 242 KLL 244
Score = 58.9 bits (141), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 40/197 (20%), Positives = 77/197 (39%)
Query: 273 SYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCM 332
S +++ R EE + E G P YN+L+D + G + + + M
Sbjct: 83 STCVMVRGLCLEGRVEEGRGLIEARWGEGCVPGAVFYNVLIDGYCRRGDIGRGLLLLGEM 142
Query: 333 RRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNL 392
P + +Y ++ D+ E ++ G PNV Y T+I K +
Sbjct: 143 ETKGIIPTVVTYGAIIHWLGRKGDLTKVESLLGEMRARGLSPNVQIYNTVINALCKCRSA 202
Query: 393 EKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNIL 452
+ ++ ++M + P+ F T++ + + D A+ +E G P+Q + L
Sbjct: 203 SQASDMLNQMVKSRFNPDVVTFNTMIAGFCREGDVREALKLLREAIRRGLEPNQLSYTPL 262
Query: 453 LSLAKTADERNEANELL 469
+ E A++LL
Sbjct: 263 IHGFCVRGEAMVASDLL 279
>gi|296087921|emb|CBI35204.3| unnamed protein product [Vitis vinifera]
Length = 543
Score = 141 bits (356), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 93/393 (23%), Positives = 174/393 (44%), Gaps = 12/393 (3%)
Query: 106 YGKQGDFNKAEKVLSFMNKK---GYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGP 162
+ K FN + +S N+ PS V L+ + + + ++ +M S G
Sbjct: 33 HSKSLHFNTIDGAISSFNRMLRMQPPPSTVDFNKLLTSIAKMKHHSTLLSLSHQMDSFGI 92
Query: 163 RPSALTYQIILKLFVEAN--KFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGY 220
P+ T I++ F N K EA +F ++ E +PD + +I K G
Sbjct: 93 PPNIYTLHILINSFCHLNRGKIGEALHLFDKMIGEG---FRPDVVTYGTLINGLCKVGNT 149
Query: 221 EKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSK---IYDQMQRAGLQPDVVSYALL 277
A +L M ++ Q + YN+++ ++V++ ++ +M G+ PD+ +Y L
Sbjct: 150 SAAIRLLGSMVQKNCQPNVFAYNTIIDSLCKDRQVTEAFNLFSEMVTKGISPDIFTYNSL 209
Query: 278 INAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVF-KCMRRDR 336
I+A + + EM+D+ + P ++N ++DA G V +A V K ++R
Sbjct: 210 IHALCNLCEWKHVATLLNEMVDSKIMPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGG 269
Query: 337 CSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMM 396
C P++ SY T+++ Y ++ A F + + +P+ +TY TLI G V L+ +
Sbjct: 270 CMPNVISYNTLINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQDAI 329
Query: 397 EIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLA 456
++ +M PN + ++D KN+ A+ K +E PD + NI +
Sbjct: 330 ALFHEMVACSQIPNLVTYRILLDYLCKNRYLAEAMALLKAIEGSNLDPDIQVNNIAIDGM 389
Query: 457 KTADERNEANELLGNFNHPNNEPGINGLSISVD 489
A E A +L N + +P + SI ++
Sbjct: 390 CRAGELEAARDLFSNLSSKGLQPDVWTYSIMIN 422
Score = 132 bits (333), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 86/358 (24%), Positives = 162/358 (45%), Gaps = 7/358 (1%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
LI K G+ + A ++L M +K P+V ++ ++++ + + A +F M + G
Sbjct: 139 LINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAYNTIIDSLCKDRQVTEAFNLFSEMVTKG 198
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
P TY ++ ++K + ++D S + PD F+ ++ K G
Sbjct: 199 ISPDIFTYNSLIHALCNLCEWKHVATLLNEMVD---SKIMPDVVSFNTVVDALCKEGKVT 255
Query: 222 KARKLFALMAERG-VQQSTVTYNSLMSFETNYKEVSK---IYDQMQRAGLQPDVVSYALL 277
+A + M +RG + ++YN+L++ + + K ++ +M R L PD V+Y+ L
Sbjct: 256 EAHDVVDKMIQRGGCMPNVISYNTLINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTL 315
Query: 278 INAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRC 337
I+ R ++A+A+F EM+ P Y ILLD + + +A + K +
Sbjct: 316 IHGLCHVERLQDAIALFHEMVACSQIPNLVTYRILLDYLCKNRYLAEAMALLKAIEGSNL 375
Query: 338 SPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMME 397
PDI + A ++E A F L G P+V TY +I G + L++ +
Sbjct: 376 DPDIQVNNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVWTYSIMINGLCRRGLLDEASK 435
Query: 398 IYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSL 455
++ +M NG N I+ TI + +N + A+ +EM + GF D + + +
Sbjct: 436 LFREMDENGCTLNGCIYNTITRGFLRNNETSRAIQLLQEMVARGFSADASTMTLFVKM 493
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/247 (24%), Positives = 110/247 (44%), Gaps = 12/247 (4%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + + LI Y K +KA + M ++ P V+++ L+ R ++A A+F
Sbjct: 273 NVISYNTLINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQDAIALF 332
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDE-EKSPLKPDQKMFHMMIYM 213
M + P+ +TY+I+L + EA M LL E S L PD ++ ++ I
Sbjct: 333 HEMVACSQIPNLVTYRILLDYLCKNRYLAEA----MALLKAIEGSNLDPDIQVNNIAIDG 388
Query: 214 YKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETN---YKEVSKIYDQMQRAGLQPD 270
+AG E AR LF+ ++ +G+Q TY+ +++ E SK++ +M G +
Sbjct: 389 MCRAGELEAARDLFSNLSSKGLQPDVWTYSIMINGLCRRGLLDEASKLFREMDENGCTLN 448
Query: 271 VVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFK 330
Y + + + A+ + +EM+ G + + + G+ DQ+ K
Sbjct: 449 GCIYNTITRGFLRNNETSRAIQLLQEMVARGFSADASTMTLFVKMLSDDGL-DQS---LK 504
Query: 331 CMRRDRC 337
+ RD C
Sbjct: 505 QILRDFC 511
>gi|356507117|ref|XP_003522317.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At5g61400-like [Glycine max]
Length = 498
Score = 141 bits (356), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 96/350 (27%), Positives = 170/350 (48%), Gaps = 17/350 (4%)
Query: 101 MLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSS 160
+L+ QGDF+ A+KV M ++G P+VV YG+ G AE +F RM+ S
Sbjct: 44 ILMNCCCAQGDFSNAQKVFDEMLERGIEPNVV-------IYGQMGE---AEGVFGRMRES 93
Query: 161 GP-RPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGG 219
G P+ TY+ ++ + + + + VF D K L PD F +I + +K G
Sbjct: 94 GVVTPNLYTYKTLMDGY---SMMGDVKRVFYLYCDMLKPGLYPDVVTFATLIDVLRKMGD 150
Query: 220 YEKARKLFALMAERGVQQSTVTYNSLMSFET---NYKEVSKIYDQMQRAGLQPDVVSYAL 276
+ A FA MA+ V + YNSL+ + E + +M+R G+ DVV+Y +
Sbjct: 151 LKAAXNCFAYMAKFDVVPNGHAYNSLIHGYCKAGDLLEAMWLRLEMERCGIFSDVVTYNI 210
Query: 277 LINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDR 336
LI R EEA+ + E+M + V +N+++D G +++A V M +
Sbjct: 211 LIKGLCDICRLEEAMGLMEKMDEVEVFANSVXFNVVIDGCCKIGDMEKAIEVCSQMTEEX 270
Query: 337 CSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMM 396
P++ +++ ++ + N ++ A + + G VP+V+TY LI G+ KV N ++
Sbjct: 271 IEPNVITFSILIDGFCNKGNVRAAMGLYTEMVIKGIVPDVVTYTALIDGHCKVGNTKEAF 330
Query: 397 EIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQ 446
++ +M G+ PN + ++D K+ + A+ + E G+P D+
Sbjct: 331 RLHKEMLDAGLSPNMFTVSCVIDGLLKDGRTNDAIKMFLEKTGAGYPGDK 380
Score = 115 bits (289), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 84/348 (24%), Positives = 162/348 (46%), Gaps = 18/348 (5%)
Query: 99 FLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQ 158
F LI K GD A ++M K P+ ++ +L+ Y + G A + M+
Sbjct: 138 FATLIDVLRKMGDLKAAXNCFAYMAKFDVVPNGHAYNSLIHGYCKAGDLLEAMWLRLEME 197
Query: 159 SSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDE-EKSPLKPDQKMFHMMIYMYKKA 217
G +TY I++K + + +EA M L+++ ++ + + F+++I K
Sbjct: 198 RCGIFSDVVTYNILIKGLCDICRLEEA----MGLMEKMDEVEVFANSVXFNVVIDGCCKI 253
Query: 218 GGYEKARKLFALMAERGVQQSTVTYNSLM---SFETNYKEVSKIYDQMQRAGLQPDVVSY 274
G EKA ++ + M E ++ + +T++ L+ + N + +Y +M G+ PDVV+Y
Sbjct: 254 GDMEKAIEVCSQMTEEXIEPNVITFSILIDGFCNKGNVRAAMGLYTEMVIKGIVPDVVTY 313
Query: 275 ALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVF----- 329
LI+ + K +EA + +EMLDAG+ P + ++D G + A +F
Sbjct: 314 TALIDGHCKVGNTKEAFRLHKEMLDAGLSPNMFTVSCVIDGLLKDGRTNDAIKMFLEKTG 373
Query: 330 -----KCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIK 384
M CSP+ Y ++ + A KFF +K +GF P+++ Y T+++
Sbjct: 374 AGYPGDKMDSRFCSPNSMMYAILIQGLCEDGXIFKATKFFAEMKWNGFKPDMLVYVTMLQ 433
Query: 385 GYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVV 432
+ + ++ +M ++ M G+ N I+ + Y +N SA++
Sbjct: 434 AHFQSKHMIDVMMLHADMVKMGVIQNTFIYRVLSRGYRENGYLKSALM 481
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 87/367 (23%), Positives = 154/367 (41%), Gaps = 21/367 (5%)
Query: 129 PSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEV 188
P++ AL+ + + + ++ M S P+ +TY I++ F A++V
Sbjct: 2 PTLQPCNALLHGLVKTQMFDSLWEVYVDMMSRRFSPTVITYGILMNCCCAQGDFSNAQKV 61
Query: 189 FMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTV-TYNSLM- 246
F +L+ P +++IY G +A +F M E GV + TY +LM
Sbjct: 62 FDEMLERGIEP--------NVVIY-----GQMGEAEGVFGRMRESGVVTPNLYTYKTLMD 108
Query: 247 --SFETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRP 304
S + K V +Y M + GL PDVV++A LI+ K + A F M V P
Sbjct: 109 GYSMMGDVKRVFYLYCDMLKPGLYPDVVTFATLIDVLRKMGDLKAAXNCFAYMAKFDVVP 168
Query: 305 THKAYNILLDAFAISGMVDQARTVFKCMRRDRCS--PDICSYTTMLSAYVNASDMEGAEK 362
AYN L+ + +G D ++ + +RC D+ +Y ++ + +E A
Sbjct: 169 NGHAYNSLIHGYCKAG--DLLEAMWLRLEMERCGIFSDVVTYNILIKGLCDICRLEEAMG 226
Query: 363 FFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYG 422
++ + N + + +I G K+ ++EK +E+ +M I+PN F+ ++D +
Sbjct: 227 LMEKMDEVEVFANSVXFNVVIDGCCKIGDMEKAIEVCSQMTEEXIEPNVITFSILIDGFC 286
Query: 423 KNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGIN 482
+ +A+ Y EM G PD L+ EA L P +
Sbjct: 287 NKGNVRAAMGLYTEMVIKGIVPDVVTYTALIDGHCKVGNTKEAFRLHKEMLDAGLSPNMF 346
Query: 483 GLSISVD 489
+S +D
Sbjct: 347 TVSCVID 353
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/246 (20%), Positives = 107/246 (43%), Gaps = 20/246 (8%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + F ++I K GD KA +V S M ++ P+V++ + L++ + G + A ++
Sbjct: 239 NSVXFNVVIDGCCKIGDMEKAIEVCSQMTEEXIEPNVITFSILIDGFCNKGNVRAAMGLY 298
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSP------------LKP 202
M G P +TY ++ + KEA + +LD SP LK
Sbjct: 299 TEMVIKGIVPDVVTYTALIDGHCKVGNTKEAFRLHKEMLDAGLSPNMFTVSCVIDGLLKD 358
Query: 203 DQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSL---MSFETNYKEVSKIY 259
+ + +++ K GY + M R +++ Y L + + + +K +
Sbjct: 359 GRTNDAIKMFLEKTGAGYPGDK-----MDSRFCSPNSMMYAILIQGLCEDGXIFKATKFF 413
Query: 260 DQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAIS 319
+M+ G +PD++ Y ++ A+ +++ + + + +M+ GV Y +L + +
Sbjct: 414 AEMKWNGFKPDMLVYVTMLQAHFQSKHMIDVMMLHADMVKMGVIQNTFIYRVLSRGYREN 473
Query: 320 GMVDQA 325
G + A
Sbjct: 474 GYLKSA 479
>gi|15221377|ref|NP_177613.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75207514|sp|Q9SSF9.1|PP123_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g74750
gi|5882748|gb|AAD55301.1|AC008263_32 Contains 2 PF|01535 DUF domains [Arabidopsis thaliana]
gi|332197508|gb|AEE35629.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 855
Score = 141 bits (356), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 84/317 (26%), Positives = 153/317 (48%), Gaps = 6/317 (1%)
Query: 70 LKQLKKWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAP 129
LKQ+ + WL+ Q + + + ++ G+ F + K+L M + G P
Sbjct: 333 LKQMDNYANALGFFYWLKRQPGFKHDGHTYTTMVGNLGRAKQFGEINKLLDEMVRDGCKP 392
Query: 130 SVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVF 189
+ V++ L+ +YGR K A +F +MQ +G P +TY ++ + +A A +++
Sbjct: 393 NTVTYNRLIHSYGRANYLKEAMNVFNQMQEAGCEPDRVTYCTLIDIHAKAGFLDIAMDMY 452
Query: 190 MTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFE 249
+ +++ L PD + ++I KAG A +LF M +G + VT+N +++
Sbjct: 453 QRM---QEAGLSPDTFTYSVIINCLGKAGHLPAAHRLFCEMVGQGCTPNLVTFNIMIALH 509
Query: 250 T---NYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTH 306
NY+ K+Y MQ AG QPD V+Y++++ G EEA VF EM P
Sbjct: 510 AKARNYETALKLYRDMQNAGFQPDKVTYSIVMEVLGHCGFLEEAEGVFAEMQRKNWVPDE 569
Query: 307 KAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRR 366
Y +L+D + +G VD+A ++ M + P++ + ++LS ++ M A +
Sbjct: 570 PVYGLLVDLWGKAGNVDKAWQWYQAMLQAGLRPNVPTCNSLLSTFLRVHRMSEAYNLLQS 629
Query: 367 LKQDGFVPNVITYGTLI 383
+ G P++ TY L+
Sbjct: 630 MLALGLHPSLQTYTLLL 646
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 87/327 (26%), Positives = 159/327 (48%), Gaps = 8/327 (2%)
Query: 146 RYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQK 205
R+K A + + G R A +LK + + + A F L + + K D
Sbjct: 306 RFKWGHAAEEALHNFGFRMDAYQANQVLK---QMDNYANALGFFYWL--KRQPGFKHDGH 360
Query: 206 MFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSF--ETNY-KEVSKIYDQM 262
+ M+ +A + + KL M G + +TVTYN L+ NY KE +++QM
Sbjct: 361 TYTTMVGNLGRAKQFGEINKLLDEMVRDGCKPNTVTYNRLIHSYGRANYLKEAMNVFNQM 420
Query: 263 QRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMV 322
Q AG +PD V+Y LI+ + KA + A+ +++ M +AG+ P Y+++++ +G +
Sbjct: 421 QEAGCEPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQEAGLSPDTFTYSVIINCLGKAGHL 480
Query: 323 DQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTL 382
A +F M C+P++ ++ M++ + A + E A K +R ++ GF P+ +TY +
Sbjct: 481 PAAHRLFCEMVGQGCTPNLVTFNIMIALHAKARNYETALKLYRDMQNAGFQPDKVTYSIV 540
Query: 383 IKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGF 442
++ LE+ ++ +M+ P++ ++ ++D +GK + D A WY+ M G
Sbjct: 541 MEVLGHCGFLEEAEGVFAEMQRKNWVPDEPVYGLLVDLWGKAGNVDKAWQWYQAMLQAGL 600
Query: 443 PPDQKAKNILLSLAKTADERNEANELL 469
P+ N LLS +EA LL
Sbjct: 601 RPNVPTCNSLLSTFLRVHRMSEAYNLL 627
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 84/337 (24%), Positives = 158/337 (46%), Gaps = 12/337 (3%)
Query: 147 YKNAEAIFRRMQ-SSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDE-EKSPLKPDQ 204
Y NA F ++ G + TY ++ A +F E + LLDE + KP+
Sbjct: 339 YANALGFFYWLKRQPGFKHDGHTYTTMVGNLGRAKQFGEINK----LLDEMVRDGCKPNT 394
Query: 205 KMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSF--ETNYKEVS-KIYDQ 261
++ +I+ Y +A ++A +F M E G + VTY +L+ + + +++ +Y +
Sbjct: 395 VTYNRLIHSYGRANYLKEAMNVFNQMQEAGCEPDRVTYCTLIDIHAKAGFLDIAMDMYQR 454
Query: 262 MQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGM 321
MQ AGL PD +Y+++IN GKA A +F EM+ G P +NI++ A +
Sbjct: 455 MQEAGLSPDTFTYSVIINCLGKAGHLPAAHRLFCEMVGQGCTPNLVTFNIMIALHAKARN 514
Query: 322 VDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGT 381
+ A +++ M+ PD +Y+ ++ + +E AE F +++ +VP+ YG
Sbjct: 515 YETALKLYRDMQNAGFQPDKVTYSIVMEVLGHCGFLEEAEGVFAEMQRKNWVPDEPVYGL 574
Query: 382 LIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCG 441
L+ + K N++K + Y M G++PN +++ + + A + M + G
Sbjct: 575 LVDLWGKAGNVDKAWQWYQAMLQAGLRPNVPTCNSLLSTFLRVHRMSEAYNLLQSMLALG 634
Query: 442 FPPDQKAKNILLSL---AKTADERNEANELLGNFNHP 475
P + +LLS A++ + +L+ HP
Sbjct: 635 LHPSLQTYTLLLSCCTDARSNFDMGFCGQLMAVSGHP 671
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 53/230 (23%), Positives = 110/230 (47%), Gaps = 1/230 (0%)
Query: 251 NYKEVSKIYDQMQR-AGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAY 309
NY + ++R G + D +Y ++ G+A++ E + +EM+ G +P Y
Sbjct: 338 NYANALGFFYWLKRQPGFKHDGHTYTTMVGNLGRAKQFGEINKLLDEMVRDGCKPNTVTY 397
Query: 310 NILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQ 369
N L+ ++ + + +A VF M+ C PD +Y T++ + A ++ A ++R+++
Sbjct: 398 NRLIHSYGRANYLKEAMNVFNQMQEAGCEPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQE 457
Query: 370 DGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDS 429
G P+ TY +I K +L ++ +M G PN F ++ + K +++++
Sbjct: 458 AGLSPDTFTYSVIINCLGKAGHLPAAHRLFCEMVGQGCTPNLVTFNIMIALHAKARNYET 517
Query: 430 AVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEP 479
A+ Y++M++ GF PD+ +I++ + EA + N P
Sbjct: 518 ALKLYRDMQNAGFQPDKVTYSIVMEVLGHCGFLEEAEGVFAEMQRKNWVP 567
Score = 42.4 bits (98), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 44/88 (50%)
Query: 92 WDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAE 151
W +E + +L+ +GK G+ +KA + M + G P+V + +L+ + R R A
Sbjct: 565 WVPDEPVYGLLVDLWGKAGNVDKAWQWYQAMLQAGLRPNVPTCNSLLSTFLRVHRMSEAY 624
Query: 152 AIFRRMQSSGPRPSALTYQIILKLFVEA 179
+ + M + G PS TY ++L +A
Sbjct: 625 NLLQSMLALGLHPSLQTYTLLLSCCTDA 652
>gi|302763321|ref|XP_002965082.1| hypothetical protein SELMODRAFT_83088 [Selaginella moellendorffii]
gi|300167315|gb|EFJ33920.1| hypothetical protein SELMODRAFT_83088 [Selaginella moellendorffii]
Length = 731
Score = 141 bits (356), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 107/396 (27%), Positives = 183/396 (46%), Gaps = 14/396 (3%)
Query: 70 LKQLKKWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAP 129
L + + W EV W + Q ++ N + +L+ G+ + +K S M + P
Sbjct: 91 LSEQRDWRKAIEVFSWFQRQDNYEANVFLYNILLRTLGRAAKWELLQKYWSEMLGERVPP 150
Query: 130 SVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVF 189
++ +++ L++ +GR G A +R M SG P + + L +EAE+ F
Sbjct: 151 TIFTYSILVDVHGRAGMKDEAIRFYRHMIESGVEPDEVMVSTYMNLQRRFGDLEEAEKAF 210
Query: 190 MTLLDEE------KSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYN 243
L E K P P+ ++ MI Y + + + K+FA M + GV+ +TVT+N
Sbjct: 211 WGLFSENLVDGTTKRPENPET--YNTMISFYGEHAKFAEGSKVFAEMMKAGVELTTVTFN 268
Query: 244 SLMSF---ETNYKEVSKIYDQM-QRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLD 299
+++ +E + M QR PDV +Y LI Y K + E E M D
Sbjct: 269 AMIHVYGKAGRTREAELLVTNMKQRKDCCPDVATYNSLIEMYVKNDKLELVSGCLERMRD 328
Query: 300 AGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEG 359
+GV + L+ A+A + +V +A + + M D YT M++ YV A D+
Sbjct: 329 SGVSADQVTFRTLISAYAANNVVWKAEALVQEMEGSGFLIDQAMYTVMIAMYVRARDVPK 388
Query: 360 AEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMD 419
AE FR L G + V TY ++ YA+ L++ E+++ + G+K +++ +M
Sbjct: 389 AESVFRFLHSRGGL-EVSTYVGVMDVYAEHKCLDQAREVFELAKNAGLK-TPSLYNVMMK 446
Query: 420 AYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSL 455
AYG F AV ++ ME G P++ + N L+ L
Sbjct: 447 AYGACDRFTDAVTVFEAMEKDGASPNEASFNSLIQL 482
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 95/400 (23%), Positives = 185/400 (46%), Gaps = 13/400 (3%)
Query: 93 DFNEMDFLMLITAYGKQGDFNKAEKVLSFM-NKKGYAPSVVSHTALMEAYGRGGRYKNAE 151
+ + F +I YGK G +AE +++ M +K P V ++ +L+E Y + + +
Sbjct: 261 ELTTVTFNAMIHVYGKAGRTREAELLVTNMKQRKDCCPDVATYNSLIEMYVKNDKLELVS 320
Query: 152 AIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMI 211
RM+ SG +T++ ++ + N +AE + + E S DQ M+ +MI
Sbjct: 321 GCLERMRDSGVSADQVTFRTLISAYAANNVVWKAEALVQEM---EGSGFLIDQAMYTVMI 377
Query: 212 YMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYK---EVSKIYDQMQRAGLQ 268
MY +A KA +F + RG + + TY +M +K + ++++ + AGL+
Sbjct: 378 AMYVRARDVPKAESVFRFLHSRGGLEVS-TYVGVMDVYAEHKCLDQAREVFELAKNAGLK 436
Query: 269 PDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTV 328
+ Y +++ AYG R +A+ VFE M G P ++N L+ +++ + V
Sbjct: 437 TPSL-YNVMMKAYGACDRFTDAVTVFEAMEKDGASPNEASFNSLIQLLCKGRLLEILQRV 495
Query: 329 FKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAK 388
++ P + S ++++S Y + + AE+ F+ + G +VI Y L+ YA+
Sbjct: 496 LVLVKAAGFKPSLASCSSVVSFYGDMGRVREAERVFKEMLASGVEADVICYSALLNAYAE 555
Query: 389 VNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKA 448
+ + D ++ G P+ ++T++M Y A Y+E+ PD A
Sbjct: 556 AGFAREAQQTLDSLKAAGFVPDTIVYTSMMKLYSNLGLIAEAEKIYEEISR--LSPDVFA 613
Query: 449 KNILLSLAKTADERNEANELLGNFNHPNNEPGINGLSISV 488
N +L+L + EA +L +PG+N ++ ++
Sbjct: 614 ANTMLNLYIKSGMFTEAEQLFRAMQR--GKPGLNEVACTM 651
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 80/351 (22%), Positives = 169/351 (48%), Gaps = 10/351 (2%)
Query: 99 FLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQ 158
+ ++I Y + D KAE V F++ +G V ++ +M+ Y A +F +
Sbjct: 373 YTVMIAMYVRARDVPKAESVFRFLHSRG-GLEVSTYVGVMDVYAEHKCLDQAREVFELAK 431
Query: 159 SSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAG 218
++G + +L Y +++K + ++F +A VF + EK P++ F+ +I + K
Sbjct: 432 NAGLKTPSL-YNVMMKAYGACDRFTDAVTVFEAM---EKDGASPNEASFNSLIQLLCKGR 487
Query: 219 GYEKARKLFALMAERGVQQSTVTYNSLMSFETN---YKEVSKIYDQMQRAGLQPDVVSYA 275
E +++ L+ G + S + +S++SF + +E +++ +M +G++ DV+ Y+
Sbjct: 488 LLEILQRVLVLVKAAGFKPSLASCSSVVSFYGDMGRVREAERVFKEMLASGVEADVICYS 547
Query: 276 LLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRD 335
L+NAY +A EA + + AG P Y ++ ++ G++ +A +++ +
Sbjct: 548 ALLNAYAEAGFAREAQQTLDSLKAAGFVPDTIVYTSMMKLYSNLGLIAEAEKIYEEI--S 605
Query: 336 RCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKM 395
R SPD+ + TML+ Y+ + AE+ FR +++ N + ++K Y + +E+
Sbjct: 606 RLSPDVFAANTMLNLYIKSGMFTEAEQLFRAMQRGKPGLNEVACTMMLKLYREAGKIEQG 665
Query: 396 MEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQ 446
+++ M + + F ++ Y K A+ KEM G P +
Sbjct: 666 LDVARVMSRRFLITDARAFNVVIAMYVKAGLMREALEALKEMRRAGLVPSR 716
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 104/226 (46%), Gaps = 14/226 (6%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
+++ YG G +AE+V M G V+ ++AL+ AY G + A+ ++++G
Sbjct: 514 VVSFYGDMGRVREAERVFKEMLASGVEADVICYSALLNAYAEAGFAREAQQTLDSLKAAG 573
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
P + Y ++KL+ EAE+++ EE S L PD + M+ +Y K+G +
Sbjct: 574 FVPDTIVYTSMMKLYSNLGLIAEAEKIY-----EEISRLSPDVFAANTMLNLYIKSGMFT 628
Query: 222 KARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSKIYDQ------MQRAGLQPDVVSYA 275
+A +LF M + V ++ Y+E KI M R L D ++
Sbjct: 629 EAEQLFRAMQRGKPGLNEVACTMMLKL---YREAGKIEQGLDVARVMSRRFLITDARAFN 685
Query: 276 LLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGM 321
++I Y KA EAL +EM AG+ P+ ++ + +GM
Sbjct: 686 VVIAMYVKAGLMREALEALKEMRRAGLVPSRSTFSCFEEILERAGM 731
>gi|218184813|gb|EEC67240.1| hypothetical protein OsI_34171 [Oryza sativa Indica Group]
Length = 458
Score = 141 bits (356), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 87/364 (23%), Positives = 170/364 (46%), Gaps = 9/364 (2%)
Query: 99 FLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNA-EAIFRRM 157
+ +LI + G + L + KKG+ ++ L++ R +A + + RRM
Sbjct: 98 YSILIGCCCRAGRLDLGFAALGNVIKKGFRVEAITFAPLLKGLCADKRTSDAMDIVLRRM 157
Query: 158 QSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKA 217
P + I+LK + N+ +EA E+ + D+ PD + +I + K
Sbjct: 158 TELSCMPDVFSCTILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFKE 217
Query: 218 GGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSK---IYDQMQRAGLQPDVVSY 274
G +KA + M R + + VTY+S+++ + + K + + M + G+ PD ++Y
Sbjct: 218 GDSDKAYSTYHEMLGRRISPNVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTY 277
Query: 275 ALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRR 334
+ +++ Y + + +E + +M GV P Y L++ +G +AR +F M +
Sbjct: 278 SSILHGYCSSGQPKEDIGTLNKMRSDGVEPNVVTYRSLMNYLCKNGRCTKARKIFDSMTK 337
Query: 335 DRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEK 394
PDI +Y T+L Y + + ++G P+ + LI YAK +++
Sbjct: 338 RGLEPDIATYRTLLQGYATKGALVEMHALLDLMVRNGIQPDHHVFNILICAYAKQEKVDQ 397
Query: 395 MMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLS 454
M ++ KMR +G+ PN + T++D K+ D A++++++M G P NI+LS
Sbjct: 398 AMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQMIDEGLTP-----NIILS 452
Query: 455 LAKT 458
++
Sbjct: 453 VSSV 456
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 76/287 (26%), Positives = 133/287 (46%), Gaps = 11/287 (3%)
Query: 63 VLGTLVRLKQLKKWNVVSEVLEWLRIQS-----WWDFNEMDFLMLITAYGKQGDFNKAEK 117
V + LK L N E LE L + + + + + +I + K+GD +KA
Sbjct: 166 VFSCTILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFKEGDSDKAYS 225
Query: 118 VLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFV 177
M + +P+VV++++++ A + A + M +G P +TY IL +
Sbjct: 226 TYHEMLGRRISPNVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYSSILHGYC 285
Query: 178 EANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQ 237
+ + KE TL ++P+ + ++ K G KARK+F M +RG++
Sbjct: 286 SSGQPKED---IGTLNKMRSDGVEPNVVTYRSLMNYLCKNGRCTKARKIFDSMTKRGLEP 342
Query: 238 STVTYNSLM---SFETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVF 294
TY +L+ + + E+ + D M R G+QPD + +LI AY K + ++A+ VF
Sbjct: 343 DIATYRTLLQGYATKGALVEMHALLDLMVRNGIQPDHHVFNILICAYAKQEKVDQAMLVF 402
Query: 295 EEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDI 341
+M G+ P Y ++D SG VD A F+ M + +P+I
Sbjct: 403 SKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQMIDEGLTPNI 449
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 122/277 (44%), Gaps = 7/277 (2%)
Query: 200 LKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSKIY 259
+ PD + ++I +AG + + ++G + +T+ L+ K S
Sbjct: 91 VTPDLCTYSILIGCCCRAGRLDLGFAALGNVIKKGFRVEAITFAPLLKGLCADKRTSDAM 150
Query: 260 D----QMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLD---AGVRPTHKAYNIL 312
D +M PDV S +L+ R +EAL + M D G P +Y +
Sbjct: 151 DIVLRRMTELSCMPDVFSCTILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTV 210
Query: 313 LDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGF 372
++ F G D+A + + M R SP++ +Y+++++A A M+ A + + ++G
Sbjct: 211 INGFFKEGDSDKAYSTYHEMLGRRISPNVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGV 270
Query: 373 VPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVV 432
+P+ +TY +++ GY ++ + +KMR +G++PN + ++M+ KN A
Sbjct: 271 MPDCMTYSSILHGYCSSGQPKEDIGTLNKMRSDGVEPNVVTYRSLMNYLCKNGRCTKARK 330
Query: 433 WYKEMESCGFPPDQKAKNILLSLAKTADERNEANELL 469
+ M G PD LL T E + LL
Sbjct: 331 IFDSMTKRGLEPDIATYRTLLQGYATKGALVEMHALL 367
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 67/307 (21%), Positives = 126/307 (41%), Gaps = 44/307 (14%)
Query: 219 GYEKARKLFALMAERGVQQSTVTYNSLMS--FETNYKEVSKIYDQMQRAG---LQPDVVS 273
G E AR + + RG S ++N ++ + ++++M RAG + PD+ +
Sbjct: 38 GTEGARHVLDELPLRGWGASIYSFNRTLTDVARDSPAAAVSLFNRMARAGADEVTPDLCT 97
Query: 274 YALLINAYGKARREEEALAVFEEMLDAGVRP-----------------THKAYNILL--- 313
Y++LI +A R + A ++ G R T A +I+L
Sbjct: 98 YSILIGCCCRAGRLDLGFAALGNVIKKGFRVEAITFAPLLKGLCADKRTSDAMDIVLRRM 157
Query: 314 -------DAFAIS----GMVDQART-----VFKCMRRDR---CSPDICSYTTMLSAYVNA 354
D F+ + G+ D+ R+ + M DR PD+ SYTT+++ +
Sbjct: 158 TELSCMPDVFSCTILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFKE 217
Query: 355 SDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIF 414
D + A + + PNV+TY ++I K ++K ME+ + M NG+ P+ +
Sbjct: 218 GDSDKAYSTYHEMLGRRISPNVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTY 277
Query: 415 TTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNH 474
++I+ Y + + +M S G P+ L++ +A ++ +
Sbjct: 278 SSILHGYCSSGQPKEDIGTLNKMRSDGVEPNVVTYRSLMNYLCKNGRCTKARKIFDSMTK 337
Query: 475 PNNEPGI 481
EP I
Sbjct: 338 RGLEPDI 344
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/154 (22%), Positives = 66/154 (42%), Gaps = 3/154 (1%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + + L+ K G KA K+ M K+G P + ++ L++ Y G A+
Sbjct: 308 NVVTYRSLMNYLCKNGRCTKARKIFDSMTKRGLEPDIATYRTLLQGYATKGALVEMHALL 367
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
M +G +P + I++ + + K +A VF + + L P+ + +I +
Sbjct: 368 DLMVRNGIQPDHHVFNILICAYAKQEKVDQAMLVFSKM---RQHGLNPNVVCYGTVIDVL 424
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSLMSF 248
K+G + A F M + G+ + + S + F
Sbjct: 425 CKSGSVDDAMLYFEQMIDEGLTPNIILSVSSVLF 458
>gi|356528730|ref|XP_003532952.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g73710-like [Glycine max]
Length = 963
Score = 141 bits (355), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 95/368 (25%), Positives = 175/368 (47%), Gaps = 13/368 (3%)
Query: 92 WDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAE 151
W FN M F+ G QGD +AE +L M +KG AP + + Y A
Sbjct: 307 WTFNTMIFVC-----GSQGDLAEAEALLGMMEEKGVAPDTKTFNIFLSLYAEARDIGAAV 361
Query: 152 AIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDE-EKSPLKPDQKMFHMM 210
++R++ +G P +TY+ +L + N +E E+ L+DE E++ + D+ +
Sbjct: 362 LCYKRIREAGLCPDEVTYRALLGVLCRKNMVREVED----LIDEMERAFVSVDEHCVPGI 417
Query: 211 IYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETN--YKEVSKI-YDQMQRAGL 267
+ MY G +KA L G S + + F ++E + Y AG
Sbjct: 418 VEMYVGEGDVDKAFDLLKKFQVNGEMSSNIRSAIMDVFAEKGLWEEAEDVFYRGRNLAGR 477
Query: 268 QPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQART 327
+ DV+ ++I AYGKA+ ++A+++F+ M + G P YN L+ + + +VDQA
Sbjct: 478 KRDVLECNVMIKAYGKAKLYDKAISLFKGMKNHGTWPNESTYNSLVQMLSGADLVDQAMD 537
Query: 328 VFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYA 387
+ M+ P +++ ++ Y + A F+ + + G PN + YG+LI G+A
Sbjct: 538 LVDEMQEVGFKPPCQTFSAVIGCYARLGQLSDAVSVFKEMVRTGVKPNEVVYGSLINGFA 597
Query: 388 KVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQK 447
+ +LE+ ++ + M +G+ N + T+++ +Y K + + A Y+ M++ D
Sbjct: 598 EHGSLEEALKYFHMMEESGLSSNLVVLTSLLKSYCKVGNLEGAKAIYERMKNMEGGLDLV 657
Query: 448 AKNILLSL 455
A N ++ L
Sbjct: 658 ACNSMIGL 665
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 89/367 (24%), Positives = 161/367 (43%), Gaps = 40/367 (10%)
Query: 136 ALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDE 195
++E Y G A + ++ Q +G S + I+ +F E ++EAE+VF
Sbjct: 416 GIVEMYVGEGDVDKAFDLLKKFQVNGEMSSNIR-SAIMDVFAEKGLWEEAEDVFYR--GR 472
Query: 196 EKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEV 255
+ K D ++MI Y KA Y+KA LF M G + TYNSL+ + V
Sbjct: 473 NLAGRKRDVLECNVMIKAYGKAKLYDKAISLFKGMKNHGTWPNESTYNSLVQMLSGADLV 532
Query: 256 SK---IYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNIL 312
+ + D+MQ G +P +++ +I Y + + +A++VF+EM+ GV+P Y L
Sbjct: 533 DQAMDLVDEMQEVGFKPPCQTFSAVIGCYARLGQLSDAVSVFKEMVRTGVKPNEVVYGSL 592
Query: 313 LDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQD-- 370
++ FA G +++A F M S ++ T++L +Y ++EGA+ + R+K
Sbjct: 593 INGFAEHGSLEEALKYFHMMEESGLSSNLVVLTSLLKSYCKVGNLEGAKAIYERMKNMEG 652
Query: 371 -----------------GFV---------------PNVITYGTLIKGYAKVNNLEKMMEI 398
G V + I+Y T++ Y V +++ +EI
Sbjct: 653 GLDLVACNSMIGLFADLGLVSEAKLAFENLREMGRADAISYATIMYLYKGVGLIDEAIEI 712
Query: 399 YDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKT 458
++M+++G+ + + ++ Y N F EM S P+ +L ++ K
Sbjct: 713 AEEMKLSGLLRDCVSYNKVLVCYAANGQFYECGELIHEMISQKLLPNDGTFKVLFTILKK 772
Query: 459 ADERNEA 465
EA
Sbjct: 773 GGIPTEA 779
Score = 105 bits (263), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 121/479 (25%), Positives = 196/479 (40%), Gaps = 83/479 (17%)
Query: 75 KWNVVSEVLEWLRIQSWWDF--NEMDFLMLITAYGKQGDFNKA----------------- 115
K +V E L W+R F +E+ ++ GDF++A
Sbjct: 152 KAGLVQEALLWIRHMRVRGFFPDEVTMCTVVKVLKDVGDFDRAHRFYKGWCEGKVELNDL 211
Query: 116 --EKVLSFMNKK-GYAPSVVSHTALM--EAYGRGGRYK-NAEAIFRRMQSS---GPRPSA 166
E L N G A +S + E + GGR + EA R SS GP+
Sbjct: 212 ELEDSLGINNSSNGSASMGISFKQFLSTELFKIGGRAPVSGEA--RSTNSSSLNGPQKPR 269
Query: 167 L--TYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKAR 224
L TY +++ L+ +A + EA EVF +L K+ + D F+ MI++ G +A
Sbjct: 270 LSNTYNVLIDLYGKAGRLSEAAEVFAEML---KAGVAVDVWTFNTMIFVCGSQGDLAEAE 326
Query: 225 KLFALMAERGVQQSTVTYNSLMSFETNYKEVSK---IYDQMQRAGLQPDVVSYALLINAY 281
L +M E+GV T T+N +S +++ Y +++ AGL PD V+Y L+
Sbjct: 327 ALLGMMEEKGVAPDTKTFNIFLSLYAEARDIGAAVLCYKRIREAGLCPDEVTYRALLGVL 386
Query: 282 GKARREEEALAVFEEM------LDAGVRP-----------THKAYNIL------------ 312
+ E + +EM +D P KA+++L
Sbjct: 387 CRKNMVREVEDLIDEMERAFVSVDEHCVPGIVEMYVGEGDVDKAFDLLKKFQVNGEMSSN 446
Query: 313 -----LDAFAISGMVDQARTVFKCMR----RDRCSPDICSYTTMLSAYVNASDMEGAEKF 363
+D FA G+ ++A VF R R R D+ M+ AY A + A
Sbjct: 447 IRSAIMDVFAEKGLWEEAEDVFYRGRNLAGRKR---DVLECNVMIKAYGKAKLYDKAISL 503
Query: 364 FRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGK 423
F+ +K G PN TY +L++ + + +++ M++ D+M+ G KP F+ ++ Y +
Sbjct: 504 FKGMKNHGTWPNESTYNSLVQMLSGADLVDQAMDLVDEMQEVGFKPPCQTFSAVIGCYAR 563
Query: 424 NKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGIN 482
AV +KEM G P++ SL E E L F H E G++
Sbjct: 564 LGQLSDAVSVFKEMVRTGVKPNEVVYG---SLINGFAEHGSLEEALKYF-HMMEESGLS 618
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 89/379 (23%), Positives = 176/379 (46%), Gaps = 13/379 (3%)
Query: 63 VLGTLVRLKQLKKWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFM 122
V+G RL QL + VS E +R + NE+ + LI + + G +A K M
Sbjct: 557 VIGCYARLGQLS--DAVSVFKEMVR--TGVKPNEVVYGSLINGFAEHGSLEEALKYFHMM 612
Query: 123 NKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKF 182
+ G + ++V T+L+++Y + G + A+AI+ RM++ + ++ LF +
Sbjct: 613 EESGLSSNLVVLTSLLKSYCKVGNLEGAKAIYERMKNMEGGLDLVACNSMIGLFADLGLV 672
Query: 183 KEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTY 242
EA+ F L + ++ D + ++Y+YK G ++A ++ M G+ + V+Y
Sbjct: 673 SEAKLAFENLREMGRA----DAISYATIMYLYKGVGLIDEAIEIAEEMKLSGLLRDCVSY 728
Query: 243 NS-LMSFETN--YKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLD 299
N L+ + N + E ++ +M L P+ ++ +L K EA+A E
Sbjct: 729 NKVLVCYAANGQFYECGELIHEMISQKLLPNDGTFKVLFTILKKGGIPTEAVAQLESSYQ 788
Query: 300 AGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEG 359
G +P + +++ GM + A + D ++ + AY +A D+
Sbjct: 789 EG-KPYARQ-TTFTALYSLVGMHNLALESAQTFIESEVDLDSSAFNVAIYAYGSAGDINK 846
Query: 360 AEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMD 419
A + +++ + P+++TY L+ Y K +E + +IY ++ I+ N+++F I+D
Sbjct: 847 ALNIYMKMRDEHLGPDLVTYIYLVGCYGKAGMVEGVKQIYSQLEYGEIESNESLFKAIID 906
Query: 420 AYGKNKDFDSAVVWYKEME 438
AY D A + +EM+
Sbjct: 907 AYKICNRKDLAELVSQEMK 925
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 103/499 (20%), Positives = 202/499 (40%), Gaps = 68/499 (13%)
Query: 53 TRGQPL-PKDLVLGTLVRLKQLKKWNVVSEVLEWLRIQSW-------------------- 91
T PL PK++ V LK+ W + + EW + Q+W
Sbjct: 65 TLPSPLSPKEIT----VLLKEQSTWQRAARIFEWFKSQTWYTPNAIHYNVVLRALGKAQQ 120
Query: 92 WDFNEMDFL---------------MLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTA 136
WD + +L ML+ YGK G +A + M +G+ P V+
Sbjct: 121 WDQLRLCWLDMAKNGVLPTNNTYSMLVDVYGKAGLVQEALLWIRHMRVRGFFPDEVTMCT 180
Query: 137 LMEAYGRGGRYKNAEAIFR--------------------RMQSSGPRPSALTYQIIL--K 174
+++ G + A ++ S+G ++++ L +
Sbjct: 181 VVKVLKDVGDFDRAHRFYKGWCEGKVELNDLELEDSLGINNSSNGSASMGISFKQFLSTE 240
Query: 175 LFVEANKFKEAEEVFMTLLDEEKSPLKPD-QKMFHMMIYMYKKAGGYEKARKLFALMAER 233
LF + + E T P KP ++++I +Y KAG +A ++FA M +
Sbjct: 241 LFKIGGRAPVSGEARSTNSSSLNGPQKPRLSNTYNVLIDLYGKAGRLSEAAEVFAEMLKA 300
Query: 234 GVQQSTVTYNSLM---SFETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEA 290
GV T+N+++ + + E + M+ G+ PD ++ + ++ Y +AR A
Sbjct: 301 GVAVDVWTFNTMIFVCGSQGDLAEAEALLGMMEEKGVAPDTKTFNIFLSLYAEARDIGAA 360
Query: 291 LAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSA 350
+ ++ + +AG+ P Y LL MV + + M R S D ++
Sbjct: 361 VLCYKRIREAGLCPDEVTYRALLGVLCRKNMVREVEDLIDEMERAFVSVDEHCVPGIVEM 420
Query: 351 YVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMR-VNGIKP 409
YV D++ A ++ + +G + + I ++ +A+ E+ +++ + R + G K
Sbjct: 421 YVGEGDVDKAFDLLKKFQVNGEMSSNIR-SAIMDVFAEKGLWEEAEDVFYRGRNLAGRKR 479
Query: 410 NQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELL 469
+ ++ AYGK K +D A+ +K M++ G P++ N L+ + AD ++A +L+
Sbjct: 480 DVLECNVMIKAYGKAKLYDKAISLFKGMKNHGTWPNESTYNSLVQMLSGADLVDQAMDLV 539
Query: 470 GNFNHPNNEPGINGLSISV 488
+P S +
Sbjct: 540 DEMQEVGFKPPCQTFSAVI 558
>gi|147812173|emb|CAN61517.1| hypothetical protein VITISV_033966 [Vitis vinifera]
Length = 635
Score = 141 bits (355), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 93/411 (22%), Positives = 187/411 (45%), Gaps = 40/411 (9%)
Query: 97 MDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRR 156
+ + L+ A Q F+ ++S + + G P + A++ A+ G + A F +
Sbjct: 108 VTYTTLLAALTIQKHFDSIHSIISQVEENGMEPDSIFFNAVINAFSESGNMQEAMKYFWK 167
Query: 157 MQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKK 216
M+ SG +P+ T+ ++K + A + +E++++ + +E ++P+ + +++++ +
Sbjct: 168 MKESGSKPTTSTFNTLIKGYGIAGEPEESQKLLZLMSQDEN--VRPNLRTYNVLVRAWCN 225
Query: 217 AGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSK---IYDQMQRAGLQPDVVS 273
KA + M G+Q VTYN++ + E S+ I +MQ + +QP+ +
Sbjct: 226 KXNIMKAWNVVYKMVASGLQPDAVTYNTIATAYAQNGEASQAEGIILEMQNSNVQPNERT 285
Query: 274 YALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILL-------------------- 313
++I Y K + +EAL M D G++P +N L+
Sbjct: 286 CCIIIGGYCKEGKIKEALQFVYRMKDLGLQPNLVVFNSLIKGFIDAVDRDGVNEVLTLME 345
Query: 314 ---------------DAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDME 358
+A++ +G +D+ R +F M + R PD Y+ + YV A + E
Sbjct: 346 EFGVKPDVITFSTIMNAWSAAGFMDKCREIFDDMVKARIQPDAHVYSILAKGYVRAGEPE 405
Query: 359 GAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIM 418
AE+ + + GF PNV+ + T+I G+ +E ++I++KM GI PN F T++
Sbjct: 406 KAEEILNAMIKSGFHPNVVMFTTIINGWCSAGRMEYAIKIFEKMCECGIAPNLKTFETLI 465
Query: 419 DAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELL 469
YG+ + + + ME P++ ++ + + EAN +L
Sbjct: 466 WGYGEARQPWKSEEVLQIMEEFNVQPEKTTLLLVAEAWRATGLKKEANRIL 516
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 91/368 (24%), Positives = 170/368 (46%), Gaps = 12/368 (3%)
Query: 117 KVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLF 176
+ +S ++K +V S T LM GR + ++I + G +PS +TY +L
Sbjct: 59 RCISCLSKTS-CRTVRSRTKLMNIMIEKGRPQEVQSILDSIIEGGHKPSLVTYTTLLAAL 117
Query: 177 VEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQ 236
F + + E++ ++PD F+ +I + ++G ++A K F M E G +
Sbjct: 118 TIQKHFDSIHSIISQV---EENGMEPDSIFFNAVINAFSESGNMQEAMKYFWKMKESGSK 174
Query: 237 QSTVTYNSLM---SFETNYKEVSKIYDQM-QRAGLQPDVVSYALLINAYGKARREEEALA 292
+T T+N+L+ +E K+ + M Q ++P++ +Y +L+ A+ +A
Sbjct: 175 PTTSTFNTLIKGYGIAGEPEESQKLLZLMSQDENVRPNLRTYNVLVRAWCNKXNIMKAWN 234
Query: 293 VFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYV 352
V +M+ +G++P YN + A+A +G QA + M+ P+ + ++ Y
Sbjct: 235 VVYKMVASGLQPDAVTYNTIATAYAQNGEASQAEGIILEMQNSNVQPNERTCCIIIGGYC 294
Query: 353 NASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQT 412
++ A +F R+K G PN++ + +LIKG+ + + + E+ M G+KP+
Sbjct: 295 KEGKIKEALQFVYRMKDLGLQPNLVVFNSLIKGFIDAVDRDGVNEVLTLMEEFGVKPDVI 354
Query: 413 IFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNF 472
F+TIM+A+ D + +M PD +IL A E +A E+L
Sbjct: 355 TFSTIMNAWSAAGFMDKCREIFDDMVKARIQPDAHVYSILAKGYVRAGEPEKAEEILNAM 414
Query: 473 N----HPN 476
HPN
Sbjct: 415 IKSGFHPN 422
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 70/279 (25%), Positives = 133/279 (47%), Gaps = 14/279 (5%)
Query: 73 LKKWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVV 132
+K WNVV ++ + S + + + + TAY + G+ ++AE ++ M P+
Sbjct: 230 MKAWNVVYKM-----VASGLQPDAVTYNTIATAYAQNGEASQAEGIILEMQNSNVQPNER 284
Query: 133 SHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTL 192
+ ++ Y + G+ K A RM+ G +P+ + + ++K F++A EV +TL
Sbjct: 285 TCCIIIGGYCKEGKIKEALQFVYRMKDLGLQPNLVVFNSLIKGFIDAVDRDGVNEV-LTL 343
Query: 193 LDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNY 252
++E +KPD F ++ + AG +K R++F M + +Q Y+ L
Sbjct: 344 MEE--FGVKPDVITFSTIMNAWSAAGFMDKCREIFDDMVKARIQPDAHVYSILAKGYVRA 401
Query: 253 KEVSK---IYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAY 309
E K I + M ++G P+VV + +IN + A R E A+ +FE+M + G+ P K +
Sbjct: 402 GEPEKAEEILNAMIKSGFHPNVVMFTTIINGWCSAGRMEYAIKIFEKMCECGIAPNLKTF 461
Query: 310 NILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTML 348
L+ + + ++ V + M P+ TT+L
Sbjct: 462 ETLIWGYGEARQPWKSEEVLQIMEEFNVQPE---KTTLL 497
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/210 (21%), Positives = 96/210 (45%), Gaps = 1/210 (0%)
Query: 271 VVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFK 330
V S L+N + R +E ++ + +++ G +P+ Y LL A I D ++
Sbjct: 72 VRSRTKLMNIMIEKGRPQEVQSILDSIIEGGHKPSLVTYTTLLAALTIQKHFDSIHSIIS 131
Query: 331 CMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVN 390
+ + PD + +++A+ + +M+ A K+F ++K+ G P T+ TLIKGY
Sbjct: 132 QVEENGMEPDSIFFNAVINAFSESGNMQEAMKYFWKMKESGSKPTTSTFNTLIKGYGIAG 191
Query: 391 NLEKMMEIYDKMRVN-GIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAK 449
E+ ++ + M + ++PN + ++ A+ + A +M + G PD
Sbjct: 192 EPEESQKLLZLMSQDENVRPNLRTYNVLVRAWCNKXNIMKAWNVVYKMVASGLQPDAVTY 251
Query: 450 NILLSLAKTADERNEANELLGNFNHPNNEP 479
N + + E ++A ++ + N +P
Sbjct: 252 NTIATAYAQNGEASQAEGIILEMQNSNVQP 281
>gi|357160857|ref|XP_003578899.1| PREDICTED: pentatricopeptide repeat-containing protein At1g22960,
mitochondrial-like [Brachypodium distachyon]
Length = 714
Score = 141 bits (355), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 86/324 (26%), Positives = 163/324 (50%), Gaps = 10/324 (3%)
Query: 118 VLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQS--SGPRPSALTYQIILKL 175
V S M + G PS+ ++ L++++ + GR A A+ + M++ +G P+ +TY +++
Sbjct: 216 VYSDMLQLGVEPSIFTYNTLLDSFCKAGRMDQAVALLKDMEARAAGCLPNDVTYNVVING 275
Query: 176 FVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGV 235
+ ++A + L+D + K ++ +I EKA L M G+
Sbjct: 276 LARKGELEKAAQ----LVDIMRLSKKASAFTYNPLITGLLARDFVEKAGALLLEMENEGI 331
Query: 236 QQSTVTYNSLMS--FETNYKEVSKI-YDQMQRAGLQPDVVSYALLINAYGKARREEEALA 292
+ VTYN+L+ F+T E +++ +D+M+ GL PD+++Y LIN Y KA ++AL
Sbjct: 332 VPTVVTYNTLIDGLFKTGNAEAAQVKFDEMRAKGLLPDLITYNSLINGYCKAGNLKQALC 391
Query: 293 VFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYV 352
+F ++ AG+ PT YNIL+D + G ++ AR + + M + C PD+C+YT +++
Sbjct: 392 LFGDLKRAGLGPTVLTYNILIDGYCRLGDLEGARRLKEEMTEEDCLPDVCTYTILMNGSC 451
Query: 353 NASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQT 412
++ FF + G P+ Y T I + + ++ ++M + GI +
Sbjct: 452 MVRNLAMVRIFFDEMLSKGLEPDCFAYNTRISAELTIGAITNAFQLREEMMLRGISSDTV 511
Query: 413 IFTTIMDAYGKNKDF-DSAVVWYK 435
+ ++D K D+ V+W K
Sbjct: 512 TYNVLIDGLCKTGSLKDAYVLWMK 535
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 108/418 (25%), Positives = 188/418 (44%), Gaps = 16/418 (3%)
Query: 44 AVAVLRSERTRGQ-PLPKDL----VLGTLVRLKQLKKWNVVSEVLEWLRIQSWWDFNEMD 98
AVA+L+ R LP D+ V+ L R +L+K + +++ + S + +N
Sbjct: 248 AVALLKDMEARAAGCLPNDVTYNVVINGLARKGELEKAAQLVDIMRLSKKASAFTYNP-- 305
Query: 99 FLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQ 158
LIT + KA +L M +G P+VV++ L++ + G + A+ F M+
Sbjct: 306 ---LITGLLARDFVEKAGALLLEMENEGIVPTVVTYNTLIDGLFKTGNAEAAQVKFDEMR 362
Query: 159 SSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAG 218
+ G P +TY ++ + +A K+A +F D +++ L P ++++I Y + G
Sbjct: 363 AKGLLPDLITYNSLINGYCKAGNLKQALCLFG---DLKRAGLGPTVLTYNILIDGYCRLG 419
Query: 219 GYEKARKLFALMAERGVQQSTVTYNSLMSFET---NYKEVSKIYDQMQRAGLQPDVVSYA 275
E AR+L M E TY LM+ N V +D+M GL+PD +Y
Sbjct: 420 DLEGARRLKEEMTEEDCLPDVCTYTILMNGSCMVRNLAMVRIFFDEMLSKGLEPDCFAYN 479
Query: 276 LLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRD 335
I+A A + EEM+ G+ YN+L+D +G + A ++ M D
Sbjct: 480 TRISAELTIGAITNAFQLREEMMLRGISSDTVTYNVLIDGLCKTGSLKDAYVLWMKMVTD 539
Query: 336 RCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKM 395
D +YT ++ A+ + A+ F + G P+V+TY I Y + NL
Sbjct: 540 GLRLDCVTYTCLIHAHCERGRLIEAKNIFDGMVASGLSPSVVTYTIFIHTYCRRGNLYLA 599
Query: 396 MEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILL 453
+ KM G++PN+ + +M A + +SA + EM G P++ +L+
Sbjct: 600 YGWFRKMLEEGVEPNEVTYNVLMHALCRMGRTESAYQHFHEMLERGLVPNKYTYTLLI 657
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 84/332 (25%), Positives = 144/332 (43%), Gaps = 6/332 (1%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
LI Y K G+ +A + + + G P+V+++ L++ Y R G + A + M
Sbjct: 376 LINGYCKAGNLKQALCLFGDLKRAGLGPTVLTYNILIDGYCRLGDLEGARRLKEEMTEED 435
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
P TY I++ F +L + L+PD ++ I G
Sbjct: 436 CLPDVCTYTILMNGSCMVRNLAMVRIFFDEMLSKG---LEPDCFAYNTRISAELTIGAIT 492
Query: 222 KARKLFALMAERGVQQSTVTYNSL---MSFETNYKEVSKIYDQMQRAGLQPDVVSYALLI 278
A +L M RG+ TVTYN L + + K+ ++ +M GL+ D V+Y LI
Sbjct: 493 NAFQLREEMMLRGISSDTVTYNVLIDGLCKTGSLKDAYVLWMKMVTDGLRLDCVTYTCLI 552
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCS 338
+A+ + R EA +F+ M+ +G+ P+ Y I + + G + A F+ M +
Sbjct: 553 HAHCERGRLIEAKNIFDGMVASGLSPSVVTYTIFIHTYCRRGNLYLAYGWFRKMLEEGVE 612
Query: 339 PDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEI 398
P+ +Y ++ A E A + F + + G VPN TY LI G K N + +
Sbjct: 613 PNEVTYNVLMHALCRMGRTESAYQHFHEMLERGLVPNKYTYTLLIDGSCKEGNWVHAIRL 672
Query: 399 YDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSA 430
Y +M GI P+ + +G+ +D+
Sbjct: 673 YCEMHQKGIHPDHCTHNALFKGFGEGHMYDAV 704
Score = 109 bits (272), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 86/347 (24%), Positives = 148/347 (42%), Gaps = 34/347 (9%)
Query: 122 MNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANK 181
M + G AP V ++ R+ + A++ M G PS TY +L F +A +
Sbjct: 185 MARHGVAPFVKECNCVLRVLRDAARWDDMRAVYSDMLQLGVEPSIFTYNTLLDSFCKAGR 244
Query: 182 FKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVT 241
+A + + + + P+ ++++I + G EKA +L +M + S T
Sbjct: 245 MDQAVALLKDM-EARAAGCLPNDVTYNVVINGLARKGELEKAAQLVDIM-RLSKKASAFT 302
Query: 242 YNSLMSFETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAG 301
YN L++ L D V E+A A+ EM + G
Sbjct: 303 YNPLIT-----------------GLLARDFV---------------EKAGALLLEMENEG 330
Query: 302 VRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAE 361
+ PT YN L+D +G + A+ F MR PD+ +Y ++++ Y A +++ A
Sbjct: 331 IVPTVVTYNTLIDGLFKTGNAEAAQVKFDEMRAKGLLPDLITYNSLINGYCKAGNLKQAL 390
Query: 362 KFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAY 421
F LK+ G P V+TY LI GY ++ +LE + ++M P+ +T +M+
Sbjct: 391 CLFGDLKRAGLGPTVLTYNILIDGYCRLGDLEGARRLKEEMTEEDCLPDVCTYTILMNGS 450
Query: 422 GKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANEL 468
++ +++ EM S G PD A N +S T A +L
Sbjct: 451 CMVRNLAMVRIFFDEMLSKGLEPDCFAYNTRISAELTIGAITNAFQL 497
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 64/235 (27%), Positives = 107/235 (45%), Gaps = 7/235 (2%)
Query: 259 YDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAI 318
+ +M R G+ P V ++ A R ++ AV+ +ML GV P+ YN LLD+F
Sbjct: 182 FQEMARHGVAPFVKECNCVLRVLRDAARWDDMRAVYSDMLQLGVEPSIFTYNTLLDSFCK 241
Query: 319 SGMVDQARTVFKCM--RRDRCSPDICSYTTMLSAYVNASDMEGAEKF--FRRLKQDGFVP 374
+G +DQA + K M R C P+ +Y +++ ++E A + RL +
Sbjct: 242 AGRMDQAVALLKDMEARAAGCLPNDVTYNVVINGLARKGELEKAAQLVDIMRLSKKA--- 298
Query: 375 NVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWY 434
+ TY LI G + +EK + +M GI P + T++D K + ++A V +
Sbjct: 299 SAFTYNPLITGLLARDFVEKAGALLLEMENEGIVPTVVTYNTLIDGLFKTGNAEAAQVKF 358
Query: 435 KEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGINGLSISVD 489
EM + G PD N L++ A +A L G+ P + +I +D
Sbjct: 359 DEMRAKGLLPDLITYNSLINGYCKAGNLKQALCLFGDLKRAGLGPTVLTYNILID 413
>gi|242045792|ref|XP_002460767.1| hypothetical protein SORBIDRAFT_02g034620 [Sorghum bicolor]
gi|241924144|gb|EER97288.1| hypothetical protein SORBIDRAFT_02g034620 [Sorghum bicolor]
Length = 762
Score = 141 bits (355), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 88/363 (24%), Positives = 176/363 (48%), Gaps = 6/363 (1%)
Query: 94 FNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAI 153
+E + +++ + +GD A + M +KG A V++T L+ R G K AE +
Sbjct: 362 LDEAVYTTVLSGFCNKGDLVSARRWFDEMQRKGLATDGVTYTTLINGLCRAGELKEAEKV 421
Query: 154 FRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYM 213
+ M + +TY +++ + + K EA +V T++ + + P+ + +
Sbjct: 422 LQEMLARRLDVDEVTYTVLVDGYCKRGKMAEAFQVHNTMV---QRGVAPNVVTYTALSDG 478
Query: 214 YKKAGGYEKARKLFALMAERGVQQSTVTYNSLMS--FETNY-KEVSKIYDQMQRAGLQPD 270
K G + A +L M+ +G++ + TYNSL++ + Y + + M AGL+PD
Sbjct: 479 LCKQGDVQAANELLHEMSNKGLELNACTYNSLINGLCKAGYLDQAMRTMADMDAAGLKPD 538
Query: 271 VVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFK 330
V +Y LI+A K+ + A + +EMLD G++PT YN+L++ F +SG V+ + + +
Sbjct: 539 VYTYTTLIDALCKSGELDRAHDLLQEMLDNGIKPTIVTYNVLMNGFCMSGRVEGGKKLLE 598
Query: 331 CMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVN 390
M P+ +Y +++ Y ++M+ + ++ + PN TY LIKG+ K
Sbjct: 599 WMLEKNIHPNATTYNSLMKQYCIGNNMKSTTEIYKGMCSRNVEPNENTYNILIKGHCKAR 658
Query: 391 NLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKN 450
++++ +++M G + + ++ ++ K K F A + +M GF + N
Sbjct: 659 SMKEAQYFHNEMIEKGFRLTASSYSALIRLLNKKKKFVEARKLFHDMRKEGFTAEPDVYN 718
Query: 451 ILL 453
+
Sbjct: 719 FYI 721
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 99/407 (24%), Positives = 180/407 (44%), Gaps = 41/407 (10%)
Query: 101 MLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNA---------- 150
+LI Y G+ A K+L M +G P+ +T+++ GR +A
Sbjct: 299 ILIHGYCALGELENAVKLLDDMVARGVEPNATVYTSVVALLCDKGRVSDALTVVEDMVHH 358
Query: 151 -----EAIF----------------RR----MQSSGPRPSALTYQIILKLFVEANKFKEA 185
EA++ RR MQ G +TY ++ A + KEA
Sbjct: 359 KVILDEAVYTTVLSGFCNKGDLVSARRWFDEMQRKGLATDGVTYTTLINGLCRAGELKEA 418
Query: 186 EEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSL 245
E+V +L L D+ + +++ Y K G +A ++ M +RGV + VTY +L
Sbjct: 419 EKVLQEMLARR---LDVDEVTYTVLVDGYCKRGKMAEAFQVHNTMVQRGVAPNVVTYTAL 475
Query: 246 ---MSFETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGV 302
+ + + + +++ +M GL+ + +Y LIN KA ++A+ +M AG+
Sbjct: 476 SDGLCKQGDVQAANELLHEMSNKGLELNACTYNSLINGLCKAGYLDQAMRTMADMDAAGL 535
Query: 303 RPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEK 362
+P Y L+DA SG +D+A + + M + P I +Y +++ + + +EG +K
Sbjct: 536 KPDVYTYTTLIDALCKSGELDRAHDLLQEMLDNGIKPTIVTYNVLMNGFCMSGRVEGGKK 595
Query: 363 FFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYG 422
+ + PN TY +L+K Y NN++ EIY M ++PN+ + ++ +
Sbjct: 596 LLEWMLEKNIHPNATTYNSLMKQYCIGNNMKSTTEIYKGMCSRNVEPNENTYNILIKGHC 655
Query: 423 KNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELL 469
K + A ++ EM GF + + L+ L + EA +L
Sbjct: 656 KARSMKEAQYFHNEMIEKGFRLTASSYSALIRLLNKKKKFVEARKLF 702
Score = 125 bits (313), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 87/331 (26%), Positives = 143/331 (43%), Gaps = 44/331 (13%)
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
P + +Y I+LK+ A + ++A ++F DE SP PD + ++I+ Y G E
Sbjct: 258 PDKNVCSYNILLKVLCGAGRVEDARQLF----DEMASP--PDVVTYGILIHGYCALGELE 311
Query: 222 KARKLFALMAERGVQQSTVTYNSLMSFETNYKEVS------------------------- 256
A KL M RGV+ + Y S+++ + VS
Sbjct: 312 NAVKLLDDMVARGVEPNATVYTSVVALLCDKGRVSDALTVVEDMVHHKVILDEAVYTTVL 371
Query: 257 -------------KIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVR 303
+ +D+MQR GL D V+Y LIN +A +EA V +EML +
Sbjct: 372 SGFCNKGDLVSARRWFDEMQRKGLATDGVTYTTLINGLCRAGELKEAEKVLQEMLARRLD 431
Query: 304 PTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKF 363
Y +L+D + G + +A V M + +P++ +YT + D++ A +
Sbjct: 432 VDEVTYTVLVDGYCKRGKMAEAFQVHNTMVQRGVAPNVVTYTALSDGLCKQGDVQAANEL 491
Query: 364 FRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGK 423
+ G N TY +LI G K L++ M M G+KP+ +TT++DA K
Sbjct: 492 LHEMSNKGLELNACTYNSLINGLCKAGYLDQAMRTMADMDAAGLKPDVYTYTTLIDALCK 551
Query: 424 NKDFDSAVVWYKEMESCGFPPDQKAKNILLS 454
+ + D A +EM G P N+L++
Sbjct: 552 SGELDRAHDLLQEMLDNGIKPTIVTYNVLMN 582
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 92/403 (22%), Positives = 163/403 (40%), Gaps = 44/403 (10%)
Query: 89 QSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYK 148
Q D N + +L+ G A ++ M P VV++ L+ Y G +
Sbjct: 255 QGLPDKNVCSYNILLKVLCGAGRVEDARQLFDEM---ASPPDVVTYGILIHGYCALGELE 311
Query: 149 NAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFH 208
NA + M + G P+A Y ++ L + + +A V ++ + + D+ ++
Sbjct: 312 NAVKLLDDMVARGVEPNATVYTSVVALLCDKGRVSDALTVVEDMVHHK---VILDEAVYT 368
Query: 209 MMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSL---MSFETNYKEVSKIYDQMQRA 265
++ + G AR+ F M +G+ VTY +L + KE K+ +M
Sbjct: 369 TVLSGFCNKGDLVSARRWFDEMQRKGLATDGVTYTTLINGLCRAGELKEAEKVLQEMLAR 428
Query: 266 GLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRP---THKA-------------- 308
L D V+Y +L++ Y K + EA V M+ GV P T+ A
Sbjct: 429 RLDVDEVTYTVLVDGYCKRGKMAEAFQVHNTMVQRGVAPNVVTYTALSDGLCKQGDVQAA 488
Query: 309 ------------------YNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSA 350
YN L++ +G +DQA M PD+ +YTT++ A
Sbjct: 489 NELLHEMSNKGLELNACTYNSLINGLCKAGYLDQAMRTMADMDAAGLKPDVYTYTTLIDA 548
Query: 351 YVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPN 410
+ +++ A + + +G P ++TY L+ G+ +E ++ + M I PN
Sbjct: 549 LCKSGELDRAHDLLQEMLDNGIKPTIVTYNVLMNGFCMSGRVEGGKKLLEWMLEKNIHPN 608
Query: 411 QTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILL 453
T + ++M Y + S YK M S P++ NIL+
Sbjct: 609 ATTYNSLMKQYCIGNNMKSTTEIYKGMCSRNVEPNENTYNILI 651
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 85/366 (23%), Positives = 154/366 (42%), Gaps = 46/366 (12%)
Query: 63 VLGTLVRLKQLKKWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFM 122
++ L R +LK+ V + + R+ D +E+ + +L+ Y K+G +A +V + M
Sbjct: 405 LINGLCRAGELKEAEKVLQEMLARRL----DVDEVTYTVLVDGYCKRGKMAEAFQVHNTM 460
Query: 123 NKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKF 182
++G AP+VV++TAL + + G + A + M + G +A TY ++ +A
Sbjct: 461 VQRGVAPNVVTYTALSDGLCKQGDVQAANELLHEMSNKGLELNACTYNSLINGLCKAGYL 520
Query: 183 KEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTY 242
+A T+ D + + LKPD + +I K+G ++A L M + G++ + VTY
Sbjct: 521 DQA---MRTMADMDAAGLKPDVYTYTTLIDALCKSGELDRAHDLLQEMLDNGIKPTIVTY 577
Query: 243 NSLMSFETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGV 302
N LM N + + R E + E ML+ +
Sbjct: 578 NVLM--------------------------------NGFCMSGRVEGGKKLLEWMLEKNI 605
Query: 303 RPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEK 362
P YN L+ + I + ++K M P+ +Y ++ + A M+ A+
Sbjct: 606 HPNATTYNSLMKQYCIGNNMKSTTEIYKGMCSRNVEPNENTYNILIKGHCKARSMKEAQY 665
Query: 363 FFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYG 422
F + + GF +Y LI+ K + +++ MR G FT D Y
Sbjct: 666 FHNEMIEKGFRLTASSYSALIRLLNKKKKFVEARKLFHDMRKEG-------FTAEPDVYN 718
Query: 423 KNKDFD 428
DF+
Sbjct: 719 FYIDFN 724
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 81/342 (23%), Positives = 145/342 (42%), Gaps = 21/342 (6%)
Query: 153 IFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKM--FHMM 210
+ RR++ G PS +L EA E+F L PD+ + ++++
Sbjct: 222 LLRRVRQYGISPSPEACNAVLSRL----PLDEAIELFQGL---------PDKNVCSYNIL 268
Query: 211 IYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVS---KIYDQMQRAGL 267
+ + AG E AR+LF MA VTY L+ E+ K+ D M G+
Sbjct: 269 LKVLCGAGRVEDARQLFDEMAS---PPDVVTYGILIHGYCALGELENAVKLLDDMVARGV 325
Query: 268 QPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQART 327
+P+ Y ++ R +AL V E+M+ V Y +L F G + AR
Sbjct: 326 EPNATVYTSVVALLCDKGRVSDALTVVEDMVHHKVILDEAVYTTVLSGFCNKGDLVSARR 385
Query: 328 VFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYA 387
F M+R + D +YTT+++ A +++ AEK + + + +TY L+ GY
Sbjct: 386 WFDEMQRKGLATDGVTYTTLINGLCRAGELKEAEKVLQEMLARRLDVDEVTYTVLVDGYC 445
Query: 388 KVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQK 447
K + + ++++ M G+ PN +T + D K D +A EM + G +
Sbjct: 446 KRGKMAEAFQVHNTMVQRGVAPNVVTYTALSDGLCKQGDVQAANELLHEMSNKGLELNAC 505
Query: 448 AKNILLSLAKTADERNEANELLGNFNHPNNEPGINGLSISVD 489
N L++ A ++A + + + +P + + +D
Sbjct: 506 TYNSLINGLCKAGYLDQAMRTMADMDAAGLKPDVYTYTTLID 547
>gi|255661208|gb|ACU25773.1| pentatricopeptide repeat-containing protein [Stachytarpheta
cayennensis]
Length = 426
Score = 141 bits (355), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 90/378 (23%), Positives = 182/378 (48%), Gaps = 41/378 (10%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
LI K D++KA + S + + G P +V++ +++ +G+ ++ A ++ M+ +G
Sbjct: 50 LIELSRKLCDYSKAISIFSRLKRAGIKPDLVAYNSMINVFGKAKLFREARSLISEMREAG 109
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFM------TLLD--------------------- 194
P ++Y +L ++VE KF EA VF LLD
Sbjct: 110 VVPDTVSYSTLLTMYVENQKFLEALSVFAEMREIKCLLDLTTCNIMIDVYGQLDMAKEAD 169
Query: 195 -----EEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSF- 248
K ++P+ ++ ++ +Y A + +A LF LM + ++Q+ VTYN++M
Sbjct: 170 KLFWSMRKVGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKDIEQNVVTYNTMMMIY 229
Query: 249 --ETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTH 306
+++ + + +M G++P+ ++Y+ +I+ +GK + + A +F+++ +GV H
Sbjct: 230 GKTLEHEKANNLIQEMHNRGIEPNAITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDH 289
Query: 307 KAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRR 366
Y ++ A+ +G+V A+ + ++R PD T + A +E A FR+
Sbjct: 290 VLYQTMIVAYERAGLVAHAKRLLHELKR----PDNIPRDTAIHILAGAGRIEEATWVFRQ 345
Query: 367 LKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKD 426
G V ++ + +I ++K ++E+++KMR G + + + +++AYGK +
Sbjct: 346 AIDAGEVKDITVFERMIDLFSKYKKYPNVVEVFEKMRGLGYFSDSNVISLVLNAYGKLHE 405
Query: 427 FDSAVVWYKEM--ESCGF 442
FD A Y M E C F
Sbjct: 406 FDKANDMYMGMQDEGCVF 423
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 86/326 (26%), Positives = 156/326 (47%), Gaps = 6/326 (1%)
Query: 164 PSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKA 223
P TY ++ F + F +A ++ +++++ P D ++ +I + +K Y KA
Sbjct: 7 PDRYTYSTLITHFGKEGLFDDALS-WLQKMEQDRVP--GDLVLYSNLIELSRKLCDYSKA 63
Query: 224 RKLFALMAERGVQQSTVTYNSLMSF---ETNYKEVSKIYDQMQRAGLQPDVVSYALLINA 280
+F+ + G++ V YNS+++ ++E + +M+ AG+ PD VSY+ L+
Sbjct: 64 ISIFSRLKRAGIKPDLVAYNSMINVFGKAKLFREARSLISEMREAGVVPDTVSYSTLLTM 123
Query: 281 YGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPD 340
Y + ++ EAL+VF EM + NI++D + M +A +F MR+ P+
Sbjct: 124 YVENQKFLEALSVFAEMREIKCLLDLTTCNIMIDVYGQLDMAKEADKLFWSMRKVGIEPN 183
Query: 341 ICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYD 400
+ SY T+L Y +A A FR +++ NV+TY T++ Y K EK +
Sbjct: 184 VVSYNTLLRVYGDAELFGEAIHLFRLMQRKDIEQNVVTYNTMMMIYGKTLEHEKANNLIQ 243
Query: 401 KMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTAD 460
+M GI+PN ++TI+ +GK D A + ++++ S G D ++ + A
Sbjct: 244 EMHNRGIEPNAITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDHVLYQTMIVAYERAG 303
Query: 461 ERNEANELLGNFNHPNNEPGINGLSI 486
A LL P+N P + I
Sbjct: 304 LVAHAKRLLHELKRPDNIPRDTAIHI 329
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 72/301 (23%), Positives = 155/301 (51%), Gaps = 6/301 (1%)
Query: 124 KKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFK 183
++ +P +++ L+ +G+ G + +A + ++M+ + Y +++L + +
Sbjct: 2 ERALSPDRYTYSTLITHFGKEGLFDDALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDYS 61
Query: 184 EAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYN 243
+A +F L +++ +KPD ++ MI ++ KA + +AR L + M E GV TV+Y+
Sbjct: 62 KAISIFSRL---KRAGIKPDLVAYNSMINVFGKAKLFREARSLISEMREAGVVPDTVSYS 118
Query: 244 SLMSFET---NYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDA 300
+L++ + E ++ +M+ D+ + ++I+ YG+ +EA +F M
Sbjct: 119 TLLTMYVENQKFLEALSVFAEMREIKCLLDLTTCNIMIDVYGQLDMAKEADKLFWSMRKV 178
Query: 301 GVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGA 360
G+ P +YN LL + + + +A +F+ M+R ++ +Y TM+ Y + E A
Sbjct: 179 GIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKDIEQNVVTYNTMMMIYGKTLEHEKA 238
Query: 361 EKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDA 420
+ + G PN ITY T+I + KV L++ ++ K+R +G++ + ++ T++ A
Sbjct: 239 NNLIQEMHNRGIEPNAITYSTIISIWGKVGKLDRAAMLFQKLRSSGVEIDHVLYQTMIVA 298
Query: 421 Y 421
Y
Sbjct: 299 Y 299
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 58/251 (23%), Positives = 121/251 (48%), Gaps = 3/251 (1%)
Query: 232 ERGVQQSTVTYNSLMSF---ETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREE 288
ER + TY++L++ E + + +M++ + D+V Y+ LI K
Sbjct: 2 ERALSPDRYTYSTLITHFGKEGLFDDALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDYS 61
Query: 289 EALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTML 348
+A+++F + AG++P AYN +++ F + + +AR++ MR PD SY+T+L
Sbjct: 62 KAISIFSRLKRAGIKPDLVAYNSMINVFGKAKLFREARSLISEMREAGVVPDTVSYSTLL 121
Query: 349 SAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIK 408
+ YV A F +++ + ++ T +I Y +++ ++ +++ MR GI+
Sbjct: 122 TMYVENQKFLEALSVFAEMREIKCLLDLTTCNIMIDVYGQLDMAKEADKLFWSMRKVGIE 181
Query: 409 PNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANEL 468
PN + T++ YG + F A+ ++ M+ + N ++ + E +AN L
Sbjct: 182 PNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKDIEQNVVTYNTMMMIYGKTLEHEKANNL 241
Query: 469 LGNFNHPNNEP 479
+ ++ EP
Sbjct: 242 IQEMHNRGIEP 252
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/181 (23%), Positives = 81/181 (44%)
Query: 301 GVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGA 360
+ P Y+ L+ F G+ D A + + M +DR D+ Y+ ++ D A
Sbjct: 4 ALSPDRYTYSTLITHFGKEGLFDDALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDYSKA 63
Query: 361 EKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDA 420
F RLK+ G P+++ Y ++I + K + + +MR G+ P+ ++T++
Sbjct: 64 ISIFSRLKRAGIKPDLVAYNSMINVFGKAKLFREARSLISEMREAGVVPDTVSYSTLLTM 123
Query: 421 YGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPG 480
Y +N+ F A+ + EM D NI++ + D EA++L + EP
Sbjct: 124 YVENQKFLEALSVFAEMREIKCLLDLTTCNIMIDVYGQLDMAKEADKLFWSMRKVGIEPN 183
Query: 481 I 481
+
Sbjct: 184 V 184
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/244 (22%), Positives = 114/244 (46%), Gaps = 6/244 (2%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + + L+ YG F +A + M +K +VV++ +M YG+ ++ A +
Sbjct: 183 NVVSYNTLLRVYGDAELFGEAIHLFRLMQRKDIEQNVVTYNTMMMIYGKTLEHEKANNLI 242
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
+ M + G P+A+TY I+ ++ + K A +F L S ++ D ++ MI Y
Sbjct: 243 QEMHNRGIEPNAITYSTIISIWGKVGKLDRAAMLFQKL---RSSGVEIDHVLYQTMIVAY 299
Query: 215 KKAGGYEKARKLFA-LMAERGVQQSTVTYNSLMSFETNYKEVSKIYDQMQRAGLQPDVVS 273
++AG A++L L + + T + +++ +E + ++ Q AG D+
Sbjct: 300 ERAGLVAHAKRLLHELKRPDNIPRDTAIH--ILAGAGRIEEATWVFRQAIDAGEVKDITV 357
Query: 274 YALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMR 333
+ +I+ + K ++ + VFE+M G +++L+A+ D+A ++ M+
Sbjct: 358 FERMIDLFSKYKKYPNVVEVFEKMRGLGYFSDSNVISLVLNAYGKLHEFDKANDMYMGMQ 417
Query: 334 RDRC 337
+ C
Sbjct: 418 DEGC 421
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 77/334 (23%), Positives = 146/334 (43%), Gaps = 20/334 (5%)
Query: 48 LRSERTRGQPLPKDLVLGTLVRL-----KQLKKWNVVSEVLEWLRIQSWWDFNEMDFLML 102
L SE +P + TL+ + K L+ +V +E+ E I+ D + ++
Sbjct: 101 LISEMREAGVVPDTVSYSTLLTMYVENQKFLEALSVFAEMRE---IKCLLDLTTCN--IM 155
Query: 103 ITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGP 162
I YG+ +A+K+ M K G P+VVS+ L+ YG + A +FR MQ
Sbjct: 156 IDVYGQLDMAKEADKLFWSMRKVGIEPNVVSYNTLLRVYGDAELFGEAIHLFRLMQRKDI 215
Query: 163 RPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEK 222
+ +TY ++ ++ K E E+ + + ++P+ + +I ++ K G ++
Sbjct: 216 EQNVVTYNTMMMIY---GKTLEHEKANNLIQEMHNRGIEPNAITYSTIISIWGKVGKLDR 272
Query: 223 ARKLFALMAERGVQQSTVTYNSLM-SFETN--YKEVSKIYDQMQRAGLQPDVVSYALLIN 279
A LF + GV+ V Y +++ ++E ++ +++R PD + I+
Sbjct: 273 AAMLFQKLRSSGVEIDHVLYQTMIVAYERAGLVAHAKRLLHELKR----PDNIPRDTAIH 328
Query: 280 AYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSP 339
A R EEA VF + +DAG + ++D F+ VF+ MR
Sbjct: 329 ILAGAGRIEEATWVFRQAIDAGEVKDITVFERMIDLFSKYKKYPNVVEVFEKMRGLGYFS 388
Query: 340 DICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFV 373
D + +L+AY + + A + ++ +G V
Sbjct: 389 DSNVISLVLNAYGKLHEFDKANDMYMGMQDEGCV 422
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 65/123 (52%)
Query: 333 RRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNL 392
R SPD +Y+T+++ + + A + ++++QD +++ Y LI+ K+ +
Sbjct: 1 RERALSPDRYTYSTLITHFGKEGLFDDALSWLQKMEQDRVPGDLVLYSNLIELSRKLCDY 60
Query: 393 EKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNIL 452
K + I+ +++ GIKP+ + ++++ +GK K F A EM G PD + + L
Sbjct: 61 SKAISIFSRLKRAGIKPDLVAYNSMINVFGKAKLFREARSLISEMREAGVVPDTVSYSTL 120
Query: 453 LSL 455
L++
Sbjct: 121 LTM 123
>gi|449460167|ref|XP_004147817.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g19290-like [Cucumis sativus]
Length = 942
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 97/374 (25%), Positives = 176/374 (47%), Gaps = 6/374 (1%)
Query: 84 EWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGR 143
E + + + F+ F M++ + ++G A V M K G PS+ S +L+ +
Sbjct: 174 ELVSVYREFSFSPTVFDMILKVFAEKGMTKFALCVFDNMGKCGRVPSLRSCNSLLSNLVQ 233
Query: 144 GGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPD 203
G A ++ +M + G P +Y I++ + + + EA F + + E+S +P+
Sbjct: 234 NGEAFKALLVYEQMIALGILPDIFSYTIMVNAYCKEGRVDEA---FNFVKEMERSCCEPN 290
Query: 204 QKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLM---SFETNYKEVSKIYD 260
++ +I Y G A+K+ ALM+E+G+ +++ TY L+ ++ K+
Sbjct: 291 VVTYNSLIDGYVSLGDVCGAKKVLALMSEKGIPENSRTYTLLIKGYCKRGQMEQAEKLIG 350
Query: 261 QMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISG 320
M L D Y +LI+AY A R ++AL + + ML G++ N L++ + G
Sbjct: 351 CMMEKNLFVDEHVYGVLIHAYCTAGRVDDALRIRDAMLKVGLKMNTVICNSLINGYCKLG 410
Query: 321 MVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYG 380
V++A V M+ PD Y T+L + D A K + G V+TY
Sbjct: 411 HVNKAAEVLVSMKDWNLKPDSYGYNTLLDGFCKQEDFIKAFKLCDEMHNKGVNFTVVTYN 470
Query: 381 TLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESC 440
TL+K V ++E + I++ M G+ PN+ + T++DA+ K FD A++ +K+ S
Sbjct: 471 TLLKNLFHVGHVEHALHIWNLMHKRGVAPNEVTYCTLLDAFFKVGTFDRAMMIWKDALSK 530
Query: 441 GFPPDQKAKNILLS 454
GF N ++
Sbjct: 531 GFTKSITLYNTMIC 544
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 91/387 (23%), Positives = 185/387 (47%), Gaps = 6/387 (1%)
Query: 98 DFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRM 157
+ +++ AY K+G ++A + M + P+VV++ +L++ Y G A+ + M
Sbjct: 258 SYTIMVNAYCKEGRVDEAFNFVKEMERSCCEPNVVTYNSLIDGYVSLGDVCGAKKVLALM 317
Query: 158 QSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKA 217
G ++ TY +++K + + + ++AE++ ++++ L D+ ++ ++I+ Y A
Sbjct: 318 SEKGIPENSRTYTLLIKGYCKRGQMEQAEKLIGCMMEKN---LFVDEHVYGVLIHAYCTA 374
Query: 218 GGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSK---IYDQMQRAGLQPDVVSY 274
G + A ++ M + G++ +TV NSL++ V+K + M+ L+PD Y
Sbjct: 375 GRVDDALRIRDAMLKVGLKMNTVICNSLINGYCKLGHVNKAAEVLVSMKDWNLKPDSYGY 434
Query: 275 ALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRR 334
L++ + K +A + +EM + GV T YN LL G V+ A ++ M +
Sbjct: 435 NTLLDGFCKQEDFIKAFKLCDEMHNKGVNFTVVTYNTLLKNLFHVGHVEHALHIWNLMHK 494
Query: 335 DRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEK 394
+P+ +Y T+L A+ + A ++ GF ++ Y T+I G+ K+ L +
Sbjct: 495 RGVAPNEVTYCTLLDAFFKVGTFDRAMMIWKDALSKGFTKSITLYNTMICGFCKMEKLVQ 554
Query: 395 MMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLS 454
EI+ KM+ G P++ + T++D Y K + A+ E G + N L++
Sbjct: 555 AQEIFLKMKELGFPPDEITYRTLIDGYCKVGNLVEALKLKDMSERDGISSSTEMYNSLIT 614
Query: 455 LAKTADERNEANELLGNFNHPNNEPGI 481
++E + N LL + P +
Sbjct: 615 GVFRSEELQKLNGLLAEMKNRELSPNV 641
Score = 125 bits (314), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 91/360 (25%), Positives = 170/360 (47%), Gaps = 6/360 (1%)
Query: 89 QSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYK 148
+S + N + + LI Y GD A+KVL+ M++KG + ++T L++ Y + G+ +
Sbjct: 284 RSCCEPNVVTYNSLIDGYVSLGDVCGAKKVLALMSEKGIPENSRTYTLLIKGYCKRGQME 343
Query: 149 NAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFH 208
AE + M Y +++ + A + +A + +L K LK + + +
Sbjct: 344 QAEKLIGCMMEKNLFVDEHVYGVLIHAYCTAGRVDDALRIRDAML---KVGLKMNTVICN 400
Query: 209 MMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLM---SFETNYKEVSKIYDQMQRA 265
+I Y K G KA ++ M + ++ + YN+L+ + ++ + K+ D+M
Sbjct: 401 SLINGYCKLGHVNKAAEVLVSMKDWNLKPDSYGYNTLLDGFCKQEDFIKAFKLCDEMHNK 460
Query: 266 GLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQA 325
G+ VV+Y L+ E AL ++ M GV P Y LLDAF G D+A
Sbjct: 461 GVNFTVVTYNTLLKNLFHVGHVEHALHIWNLMHKRGVAPNEVTYCTLLDAFFKVGTFDRA 520
Query: 326 RTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKG 385
++K + I Y TM+ + + A++ F ++K+ GF P+ ITY TLI G
Sbjct: 521 MMIWKDALSKGFTKSITLYNTMICGFCKMEKLVQAQEIFLKMKELGFPPDEITYRTLIDG 580
Query: 386 YAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPD 445
Y KV NL + +++ D +GI + ++ +++ ++++ EM++ P+
Sbjct: 581 YCKVGNLVEALKLKDMSERDGISSSTEMYNSLITGVFRSEELQKLNGLLAEMKNRELSPN 640
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 91/378 (24%), Positives = 175/378 (46%), Gaps = 6/378 (1%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + +LI Y K+G +AEK++ M +K + L+ AY GR +A I
Sbjct: 325 NSRTYTLLIKGYCKRGQMEQAEKLIGCMMEKNLFVDEHVYGVLIHAYCTAGRVDDALRIR 384
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
M G + + + ++ + + +A EV +++ D LKPD ++ ++ +
Sbjct: 385 DAMLKVGLKMNTVICNSLINGYCKLGHVNKAAEVLVSMKDWN---LKPDSYGYNTLLDGF 441
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSLMS--FETNYKEVS-KIYDQMQRAGLQPDV 271
K + KA KL M +GV + VTYN+L+ F + E + I++ M + G+ P+
Sbjct: 442 CKQEDFIKAFKLCDEMHNKGVNFTVVTYNTLLKNLFHVGHVEHALHIWNLMHKRGVAPNE 501
Query: 272 VSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKC 331
V+Y L++A+ K + A+ ++++ L G + YN ++ F + QA+ +F
Sbjct: 502 VTYCTLLDAFFKVGTFDRAMMIWKDALSKGFTKSITLYNTMICGFCKMEKLVQAQEIFLK 561
Query: 332 MRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNN 391
M+ PD +Y T++ Y ++ A K ++DG + Y +LI G +
Sbjct: 562 MKELGFPPDEITYRTLIDGYCKVGNLVEALKLKDMSERDGISSSTEMYNSLITGVFRSEE 621
Query: 392 LEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNI 451
L+K+ + +M+ + PN + +++ + D A Y +M G P+ +
Sbjct: 622 LQKLNGLLAEMKNRELSPNVVTYGSLIAGWCDKGMMDKAYNAYFKMIDKGIAPNIIIGSK 681
Query: 452 LLSLAKTADERNEANELL 469
++S + +EAN +L
Sbjct: 682 IVSSLYRHGKIDEANLIL 699
Score = 102 bits (253), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 84/321 (26%), Positives = 133/321 (41%), Gaps = 21/321 (6%)
Query: 154 FRRMQSSGP--RPSALTYQIILKLFVEANKFKEAEEVFMTLL-------------DEEKS 198
F ++ S P RP +Y I+ + A +KE L+ DE S
Sbjct: 118 FFKLASKQPKFRPDVSSYCKIVHILSRARMYKEVRVYLNELVVLCKNNYIASAVWDELVS 177
Query: 199 PLKP---DQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEV 255
+ +F M++ ++ + G + A +F M + G S + NSL+S E
Sbjct: 178 VYREFSFSPTVFDMILKVFAEKGMTKFALCVFDNMGKCGRVPSLRSCNSLLSNLVQNGEA 237
Query: 256 SK---IYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNIL 312
K +Y+QM G+ PD+ SY +++NAY K R +EA +EM + P YN L
Sbjct: 238 FKALLVYEQMIALGILPDIFSYTIMVNAYCKEGRVDEAFNFVKEMERSCCEPNVVTYNSL 297
Query: 313 LDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGF 372
+D + G V A+ V M + +YT ++ Y ME AEK + +
Sbjct: 298 IDGYVSLGDVCGAKKVLALMSEKGIPENSRTYTLLIKGYCKRGQMEQAEKLIGCMMEKNL 357
Query: 373 VPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVV 432
+ YG LI Y ++ + I D M G+K N I ++++ Y K + A
Sbjct: 358 FVDEHVYGVLIHAYCTAGRVDDALRIRDAMLKVGLKMNTVICNSLINGYCKLGHVNKAAE 417
Query: 433 WYKEMESCGFPPDQKAKNILL 453
M+ PD N LL
Sbjct: 418 VLVSMKDWNLKPDSYGYNTLL 438
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 85/414 (20%), Positives = 171/414 (41%), Gaps = 41/414 (9%)
Query: 93 DFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEA 152
+F + + L+ G A + + M+K+G AP+ V++ L++A+ + G + A
Sbjct: 463 NFTVVTYNTLLKNLFHVGHVEHALHIWNLMHKRGVAPNEVTYCTLLDAFFKVGTFDRAMM 522
Query: 153 IFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIY 212
I++ S G S Y ++ F + K +A+E+F+ + ++ PD+ + +I
Sbjct: 523 IWKDALSKGFTKSITLYNTMICGFCKMEKLVQAQEIFLKM---KELGFPPDEITYRTLID 579
Query: 213 MYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSKI---YDQMQRAGLQP 269
Y K G +A KL + G+ ST YNSL++ +E+ K+ +M+ L P
Sbjct: 580 GYCKVGNLVEALKLKDMSERDGISSSTEMYNSLITGVFRSEELQKLNGLLAEMKNRELSP 639
Query: 270 DVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVF 329
+VV+Y LI + ++A + +M+D G+ P + ++ + G +D+A +
Sbjct: 640 NVVTYGSLIAGWCDKGMMDKAYNAYFKMIDKGIAPNIIIGSKIVSSLYRHGKIDEANLIL 699
Query: 330 KCM---------------------------------RRDRCSP--DICSYTTMLSAYVNA 354
+ ++ P + Y ++ +
Sbjct: 700 HQIADIDPIAAHAHSVELPKSDLRHLETQKIVDSFGKKAMSIPISNNIVYNIAITGLCKS 759
Query: 355 SDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIF 414
+++ + L GF P+ TY +LI + V + + + D M G+ PN ++
Sbjct: 760 KNIDDVRRILSDLLLKGFCPDNYTYCSLIHACSAVGKVNEAFCLRDDMINAGLVPNIVVY 819
Query: 415 TTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANEL 468
+++ K+ + D A + ++ G P N L+ EA EL
Sbjct: 820 NALINGLCKSGNLDRARRLFNKLARKGLSPTVVTYNTLIDGYCKGGRTTEALEL 873
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 91/421 (21%), Positives = 173/421 (41%), Gaps = 78/421 (18%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
NE+ + L+ A+ K G F++A + KG+ S+ + ++ + + + A+ IF
Sbjct: 500 NEVTYCTLLDAFFKVGTFDRAMMIWKDALSKGFTKSITLYNTMICGFCKMEKLVQAQEIF 559
Query: 155 RRMQSSGPRPSALTYQIILKLF------VEANKFKEAEE-----------------VFMT 191
+M+ G P +TY+ ++ + VEA K K+ E VF +
Sbjct: 560 LKMKELGFPPDEITYRTLIDGYCKVGNLVEALKLKDMSERDGISSSTEMYNSLITGVFRS 619
Query: 192 --------LLDEEKS-PLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTY 242
LL E K+ L P+ + +I + G +KA + M ++G+ + +
Sbjct: 620 EELQKLNGLLAEMKNRELSPNVVTYGSLIAGWCDKGMMDKAYNAYFKMIDKGIAPNIIIG 679
Query: 243 NSLMSF--------ETN---------------------------YKEVSKIYDQMQRAGL 267
+ ++S E N + E KI D + +
Sbjct: 680 SKIVSSLYRHGKIDEANLILHQIADIDPIAAHAHSVELPKSDLRHLETQKIVDSFGKKAM 739
Query: 268 QPDV---VSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQ 324
+ + Y + I K++ ++ + ++L G P + Y L+ A + G V++
Sbjct: 740 SIPISNNIVYNIAITGLCKSKNIDDVRRILSDLLLKGFCPDNYTYCSLIHACSAVGKVNE 799
Query: 325 ARTVFKCMRRDRCS----PDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYG 380
A C+R D + P+I Y +++ + +++ A + F +L + G P V+TY
Sbjct: 800 AF----CLRDDMINAGLVPNIVVYNALINGLCKSGNLDRARRLFNKLARKGLSPTVVTYN 855
Query: 381 TLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESC 440
TLI GY K + +E+ DKMR GI P+ ++T++ + +V EM
Sbjct: 856 TLIDGYCKGGRTTEALELKDKMREEGICPSSITYSTLIHGLYMEGKSEQSVGLLNEMMKA 915
Query: 441 G 441
G
Sbjct: 916 G 916
Score = 91.7 bits (226), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 75/331 (22%), Positives = 146/331 (44%), Gaps = 13/331 (3%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
LIT + + K +L+ M + +P+VV++ +L+ + G A + +M G
Sbjct: 612 LITGVFRSEELQKLNGLLAEMKNRELSPNVVTYGSLIAGWCDKGMMDKAYNAYFKMIDKG 671
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
P+ + I+ K EA + + D + P H + + K +
Sbjct: 672 IAPNIIIGSKIVSSLYRHGKIDEANLILHQIAD-----IDPIAAHAHS-VELPKSDLRHL 725
Query: 222 KARKLFALMAERGVQ---QSTVTYN---SLMSFETNYKEVSKIYDQMQRAGLQPDVVSYA 275
+ +K+ ++ + + + YN + + N +V +I + G PD +Y
Sbjct: 726 ETQKIVDSFGKKAMSIPISNNIVYNIAITGLCKSKNIDDVRRILSDLLLKGFCPDNYTYC 785
Query: 276 LLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRD 335
LI+A + EA + ++M++AG+ P YN L++ SG +D+AR +F + R
Sbjct: 786 SLIHACSAVGKVNEAFCLRDDMINAGLVPNIVVYNALINGLCKSGNLDRARRLFNKLARK 845
Query: 336 RCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKM 395
SP + +Y T++ Y A + +++++G P+ ITY TLI G E+
Sbjct: 846 GLSPTVVTYNTLIDGYCKGGRTTEALELKDKMREEGICPSSITYSTLIHGLYMEGKSEQS 905
Query: 396 MEIYDKMRVNGIKPNQTIFTTIMDAYGKNKD 426
+ + ++M G K + + + AY K +D
Sbjct: 906 VGLLNEMMKAG-KGSSVMDPLVARAYVKWRD 935
>gi|18397002|ref|NP_566237.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75207286|sp|Q9SR00.1|PP213_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g04760, chloroplastic; Flags: Precursor
gi|6175176|gb|AAF04902.1|AC011437_17 hypothetical protein [Arabidopsis thaliana]
gi|15810359|gb|AAL07067.1| unknown protein [Arabidopsis thaliana]
gi|22136960|gb|AAM91709.1| unknown protein [Arabidopsis thaliana]
gi|332640611|gb|AEE74132.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 602
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 108/429 (25%), Positives = 195/429 (45%), Gaps = 22/429 (5%)
Query: 61 DLVLGT-----LVRLKQLKKWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKA 115
D++L T L+ + K V E+LE + +N LI + K + A
Sbjct: 123 DVILCTKLIKGFFTLRNIPKAVRVMEILEKFGQPDVFAYNA-----LINGFCKMNRIDDA 177
Query: 116 EKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKL 175
+VL M K ++P V++ ++ + G+ A + ++ S +P+ +TY I+
Sbjct: 178 TRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLLSDNCQPTVITYTIL--- 234
Query: 176 FVEANKFKEAEEVFMTLLDEEKS-PLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERG 234
+EA + + + L+DE S LKPD ++ +I K G ++A ++ + +G
Sbjct: 235 -IEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKG 293
Query: 235 VQQSTVTYNSLMSFETN---YKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEAL 291
+ ++YN L+ N ++E K+ +M P+VV+Y++LI + + EEA+
Sbjct: 294 CEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAM 353
Query: 292 AVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAY 351
+ + M + G+ P +Y+ L+ AF G +D A + M D C PDI +Y T+L+
Sbjct: 354 NLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATL 413
Query: 352 VNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQ 411
+ A + F +L + G PN +Y T+ + + + + +M NGI P++
Sbjct: 414 CKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDE 473
Query: 412 TIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNI-LLSLAKTA---DERNEANE 467
+ +++ + D A +M SC F P NI LL K D N
Sbjct: 474 ITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLES 533
Query: 468 LLGNFNHPN 476
++GN PN
Sbjct: 534 MVGNGCRPN 542
Score = 139 bits (349), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 95/383 (24%), Positives = 174/383 (45%), Gaps = 7/383 (1%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
LI + + KA +V+ + K G P V ++ AL+ + + R +A + RM+S
Sbjct: 130 LIKGFFTLRNIPKAVRVMEILEKFG-QPDVFAYNALINGFCKMNRIDDATRVLDRMRSKD 188
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
P +TY I++ K A +V LL + +P + ++I GG +
Sbjct: 189 FSPDTVTYNIMIGSLCSRGKLDLALKVLNQLLSDN---CQPTVITYTILIEATMLEGGVD 245
Query: 222 KARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSKIYD---QMQRAGLQPDVVSYALLI 278
+A KL M RG++ TYN+++ V + ++ ++ G +PDV+SY +L+
Sbjct: 246 EALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILL 305
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCS 338
A + EE + +M P Y+IL+ G +++A + K M+ +
Sbjct: 306 RALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLT 365
Query: 339 PDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEI 398
PD SY +++A+ ++ A +F + DG +P+++ Y T++ K ++ +EI
Sbjct: 366 PDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEI 425
Query: 399 YDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKT 458
+ K+ G PN + + T+ A + D A+ EM S G PD+ N ++S
Sbjct: 426 FGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCR 485
Query: 459 ADERNEANELLGNFNHPNNEPGI 481
+EA ELL + P +
Sbjct: 486 EGMVDEAFELLVDMRSCEFHPSV 508
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 94/371 (25%), Positives = 162/371 (43%), Gaps = 6/371 (1%)
Query: 101 MLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSS 160
++I + +G + A KVL+ + P+V+++T L+EA G A + M S
Sbjct: 198 IMIGSLCSRGKLDLALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSR 257
Query: 161 GPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGY 220
G +P TY I++ + A E+ L E +PD +++++ G +
Sbjct: 258 GLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNL---ELKGCEPDVISYNILLRALLNQGKW 314
Query: 221 EKARKLFALMAERGVQQSTVTYNSLMSF---ETNYKEVSKIYDQMQRAGLQPDVVSYALL 277
E+ KL M + VTY+ L++ + +E + M+ GL PD SY L
Sbjct: 315 EEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPL 374
Query: 278 INAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRC 337
I A+ + R + A+ E M+ G P YN +L +G DQA +F + C
Sbjct: 375 IAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGC 434
Query: 338 SPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMME 397
SP+ SY TM SA ++ D A + +G P+ ITY ++I + +++ E
Sbjct: 435 SPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFE 494
Query: 398 IYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAK 457
+ MR P+ + ++ + K + A+ + M G P++ +L+
Sbjct: 495 LLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGIG 554
Query: 458 TADERNEANEL 468
A R EA EL
Sbjct: 555 FAGYRAEAMEL 565
Score = 121 bits (304), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 90/387 (23%), Positives = 162/387 (41%), Gaps = 38/387 (9%)
Query: 94 FNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAI 153
F + L + + G++ ++ +L M +KGY P V+ T L++ + A +
Sbjct: 87 FRDTQMLKIFHRSCRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRV 146
Query: 154 FRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSP-LKPDQKMFHMMIY 212
++ G +P Y ++ F + N+ +A V LD +S PD +++MI
Sbjct: 147 MEILEKFG-QPDVFAYNALINGFCKMNRIDDATRV----LDRMRSKDFSPDTVTYNIMIG 201
Query: 213 MYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSKIYDQMQRAGLQPDVV 272
G + A K + +Q+ QP V+
Sbjct: 202 SLCSRGKLDLALK--------------------------------VLNQLLSDNCQPTVI 229
Query: 273 SYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCM 332
+Y +LI A +EAL + +EML G++P YN ++ GMVD+A + + +
Sbjct: 230 TYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNL 289
Query: 333 RRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNL 392
C PD+ SY +L A +N E EK ++ + PNV+TY LI + +
Sbjct: 290 ELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKI 349
Query: 393 EKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNIL 452
E+ M + M+ G+ P+ + ++ A+ + D A+ + + M S G PD N +
Sbjct: 350 EEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTV 409
Query: 453 LSLAKTADERNEANELLGNFNHPNNEP 479
L+ + ++A E+ G P
Sbjct: 410 LATLCKNGKADQALEIFGKLGEVGCSP 436
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 66/238 (27%), Positives = 106/238 (44%), Gaps = 1/238 (0%)
Query: 251 NYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYN 310
NY E + + M R G PDV+ LI + R +A+ V E +L+ +P AYN
Sbjct: 104 NYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVME-ILEKFGQPDVFAYN 162
Query: 311 ILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQD 370
L++ F +D A V MR SPD +Y M+ + + ++ A K +L D
Sbjct: 163 ALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLLSD 222
Query: 371 GFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSA 430
P VITY LI+ +++ +++ D+M G+KP+ + TI+ K D A
Sbjct: 223 NCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRA 282
Query: 431 VVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGINGLSISV 488
+ +E G PD + NILL + E +L+ +P + SI +
Sbjct: 283 FEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILI 340
Score = 41.2 bits (95), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 27/121 (22%), Positives = 56/121 (46%), Gaps = 1/121 (0%)
Query: 369 QDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFD 428
+ G+ P+VI LIKG+ + N+ K + + + + G +P+ + +++ + K D
Sbjct: 117 RKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFG-QPDVFAYNALINGFCKMNRID 175
Query: 429 SAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGINGLSISV 488
A M S F PD NI++ + + + A ++L N +P + +I +
Sbjct: 176 DATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLLSDNCQPTVITYTILI 235
Query: 489 D 489
+
Sbjct: 236 E 236
>gi|357124917|ref|XP_003564143.1| PREDICTED: pentatricopeptide repeat-containing protein At3g18110,
chloroplastic-like [Brachypodium distachyon]
Length = 1285
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 86/361 (23%), Positives = 172/361 (47%), Gaps = 10/361 (2%)
Query: 99 FLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEA--IFRR 156
F ++ Y + G F+ ++L M + P +VS L+ A + G A +
Sbjct: 66 FNAMMGVYARSGRFDDVRQLLDAMRGQELEPDLVSFNTLINARAKSGCLAPGSAFDLLLE 125
Query: 157 MQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKK 216
++ G RP +TY ++ + + +A VF ++ E +PD ++ M+ ++ +
Sbjct: 126 VRQVGLRPDVITYNTLISACSQGSNLDDAVAVFEEMMASE---CRPDLWTYNAMVSVHGR 182
Query: 217 AGGYEKARKLFALMAERGVQQSTVTYNSLM---SFETNYKEVSKIYDQMQRAGLQPDVVS 273
G + A ++F + E+G + VTYNSL+ + E + V ++ +++ RAG + D ++
Sbjct: 183 CGKAQDAERMFRELVEKGFKPDAVTYNSLLYAFAKEGDADTVERVCEELVRAGFKKDGIT 242
Query: 274 YALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMR 333
Y +I+ YGK R + AL +++EM G P Y +L+D+ + A V + M
Sbjct: 243 YNTMIHMYGKMGRLDLALGLYDEMRALGCTPDAVTYTVLIDSLGKMDRISDAGKVLEEMA 302
Query: 334 RDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLE 393
P + +++ ++ AY E A + F + G P+ + Y ++ A+ ++
Sbjct: 303 DAGLKPTLVTFSALICAYAKGGRREEAVRTFSHMVASGVKPDRLAYLVMLDIIARSGDMR 362
Query: 394 KMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEME-SCGFPPDQKAKNIL 452
K+M +Y M +G +P+ ++ ++ A K ++D ++ME C P Q +IL
Sbjct: 363 KLMALYQTMMNDGYRPDNALYQVMLAALAKGNEYDEIEAVVQDMEVVCQMNP-QLVSSIL 421
Query: 453 L 453
+
Sbjct: 422 I 422
Score = 135 bits (340), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 102/403 (25%), Positives = 190/403 (47%), Gaps = 19/403 (4%)
Query: 75 KWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDF--NKAEKVLSFMNKKGYAPSVV 132
+++ V ++L+ +R Q + + + F LI A K G A +L + + G P V+
Sbjct: 78 RFDDVRQLLDAMRGQEL-EPDLVSFNTLINARAKSGCLAPGSAFDLLLEVRQVGLRPDVI 136
Query: 133 SHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTL 192
++ L+ A +G +A A+F M +S RP TY ++ + K ++AE +F L
Sbjct: 137 TYNTLISACSQGSNLDDAVAVFEEMMASECRPDLWTYNAMVSVHGRCGKAQDAERMFREL 196
Query: 193 LDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNY 252
+++ KPD ++ ++Y + K G + ++ + G ++ +TYN+++ Y
Sbjct: 197 VEK---GFKPDAVTYNSLLYAFAKEGDADTVERVCEELVRAGFKKDGITYNTMIHM---Y 250
Query: 253 KEVSKI------YDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTH 306
++ ++ YD+M+ G PD V+Y +LI++ GK R +A V EEM DAG++PT
Sbjct: 251 GKMGRLDLALGLYDEMRALGCTPDAVTYTVLIDSLGKMDRISDAGKVLEEMADAGLKPTL 310
Query: 307 KAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRR 366
++ L+ A+A G ++A F M PD +Y ML + DM ++
Sbjct: 311 VTFSALICAYAKGGRREEAVRTFSHMVASGVKPDRLAYLVMLDIIARSGDMRKLMALYQT 370
Query: 367 LKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKD 426
+ DG+ P+ Y ++ AK N +++ + M V + N + ++I+ K +
Sbjct: 371 MMNDGYRPDNALYQVMLAALAKGNEYDEIEAVVQDMEVV-CQMNPQLVSSILI---KAEC 426
Query: 427 FDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELL 469
K+ G PD K+ +L +T + E LL
Sbjct: 427 ISQGAKLLKKACLQGHEPDSKSLLSILDAYETTGKHEEGLSLL 469
Score = 125 bits (314), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 86/374 (22%), Positives = 169/374 (45%), Gaps = 6/374 (1%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
LI AY + G + A V M +KG P++ S +M A GR I + +Q G
Sbjct: 630 LIHAYAESGLYEHARAVFDIMIEKGPLPTIDSVNGMMRALIIDGRLDELYVIVQELQDMG 689
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
+ S T ++L F +A E +++ + +++ P+ ++ MI + + Y
Sbjct: 690 FKISKSTVILMLDAFTKAGDIFEVMKIYNGM---KEAGYLPNMHIYRSMISLLCRNKRYR 746
Query: 222 KARKLFALMAERGVQQSTVTYNSLMSFET---NYKEVSKIYDQMQRAGLQPDVVSYALLI 278
+ M G + N+L+ T N+ + ++Y + AGL+P+ +Y LI
Sbjct: 747 DVELMVVEMERAGFEPDLTILNTLLLMYTGNGNFDKTVEVYHSILEAGLEPNEDTYNTLI 806
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCS 338
Y + R EE + EM G+ P ++Y LL A + + +QA +F+ +R
Sbjct: 807 VMYSRNLRPEEGFTLLNEMGKKGLTPKLESYKSLLAASGKAKLWEQAEQLFEEIRSKGYR 866
Query: 339 PDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEI 398
+ Y ++ Y +A + AE+ +K+DG P + T L+ Y + ++ ++
Sbjct: 867 LNRSLYHMLMKIYRDACNHSKAEQLLASMKEDGIEPTIATMHILMTSYGTAGHPDEAEKV 926
Query: 399 YDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKT 458
+ ++ + ++ + ++T+ +AY KN D++ + EM++ G PD + + A
Sbjct: 927 LNSLKSSSLEVSTLPYSTVFNAYLKNGDYNLGITKLLEMKADGVKPDHQVWTCFIRAASL 986
Query: 459 ADERNEANELLGNF 472
+ +A LL +
Sbjct: 987 CERTADAILLLNSL 1000
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 72/275 (26%), Positives = 136/275 (49%), Gaps = 8/275 (2%)
Query: 205 KMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSK-----IY 259
++F+ M+ +Y ++G ++ R+L M + ++ V++N+L++ ++ +
Sbjct: 64 QVFNAMMGVYARSGRFDDVRQLLDAMRGQELEPDLVSFNTLINARAKSGCLAPGSAFDLL 123
Query: 260 DQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAIS 319
++++ GL+PDV++Y LI+A + ++A+AVFEEM+ + RP YN ++
Sbjct: 124 LEVRQVGLRPDVITYNTLISACSQGSNLDDAVAVFEEMMASECRPDLWTYNAMVSVHGRC 183
Query: 320 GMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITY 379
G A +F+ + PD +Y ++L A+ D + E+ L + GF + ITY
Sbjct: 184 GKAQDAERMFRELVEKGFKPDAVTYNSLLYAFAKEGDADTVERVCEELVRAGFKKDGITY 243
Query: 380 GTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMES 439
T+I Y K+ L+ + +YD+MR G P+ +T ++D+ GK A +EM
Sbjct: 244 NTMIHMYGKMGRLDLALGLYDEMRALGCTPDAVTYTVLIDSLGKMDRISDAGKVLEEMAD 303
Query: 440 CGFPPDQKAKNILLSLAKTADERNEANELLGNFNH 474
G P + L+ R EA + F+H
Sbjct: 304 AGLKPTLVTFSALICAYAKGGRREEA---VRTFSH 335
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 89/388 (22%), Positives = 177/388 (45%), Gaps = 6/388 (1%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
LIT + F +A +V S M G PS + +++ AY + G + A + SG
Sbjct: 525 LITCLEEAEFFPEASQVFSDMQFIGIEPSRKIYESMISAYCKLGFPETAHQLMDEAVQSG 584
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
+ L+ ++ + K + E F+ L +E S D+++++ +I+ Y ++G YE
Sbjct: 585 ISLNILSSRVTMIEAYGKIKLWQHAENFVKGLKQEPSI---DRRIWNALIHAYAESGLYE 641
Query: 222 KARKLFALMAERGVQQSTVTYNSLMS---FETNYKEVSKIYDQMQRAGLQPDVVSYALLI 278
AR +F +M E+G + + N +M + E+ I ++Q G + + L++
Sbjct: 642 HARAVFDIMIEKGPLPTIDSVNGMMRALIIDGRLDELYVIVQELQDMGFKISKSTVILML 701
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCS 338
+A+ KA E + ++ M +AG P Y ++ + + M R
Sbjct: 702 DAFTKAGDIFEVMKIYNGMKEAGYLPNMHIYRSMISLLCRNKRYRDVELMVVEMERAGFE 761
Query: 339 PDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEI 398
PD+ T+L Y + + + + + + G PN TY TLI Y++ E+ +
Sbjct: 762 PDLTILNTLLLMYTGNGNFDKTVEVYHSILEAGLEPNEDTYNTLIVMYSRNLRPEEGFTL 821
Query: 399 YDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKT 458
++M G+ P + +++ A GK K ++ A ++E+ S G+ ++ ++L+ + +
Sbjct: 822 LNEMGKKGLTPKLESYKSLLAASGKAKLWEQAEQLFEEIRSKGYRLNRSLYHMLMKIYRD 881
Query: 459 ADERNEANELLGNFNHPNNEPGINGLSI 486
A ++A +LL + EP I + I
Sbjct: 882 ACNHSKAEQLLASMKEDGIEPTIATMHI 909
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 74/343 (21%), Positives = 151/343 (44%), Gaps = 35/343 (10%)
Query: 100 LMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQS 159
++++ A+ K GD + K+ + M + GY P++ + +++ R RY++ E + M+
Sbjct: 698 ILMLDAFTKAGDIFEVMKIYNGMKEAGYLPNMHIYRSMISLLCRNKRYRDVELMVVEMER 757
Query: 160 SGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGG 219
+G P +L ++ F + EV+ ++L+ + L+P++ ++ +I MY +
Sbjct: 758 AGFEPDLTILNTLLLMYTGNGNFDKTVEVYHSILE---AGLEPNEDTYNTLIVMYSR--- 811
Query: 220 YEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSKIYDQMQRAGLQPDVVSYALLIN 279
L E G + ++M + GL P + SY L+
Sbjct: 812 --------NLRPEEGF---------------------TLLNEMGKKGLTPKLESYKSLLA 842
Query: 280 AYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSP 339
A GKA+ E+A +FEE+ G R Y++L+ + + +A + M+ D P
Sbjct: 843 ASGKAKLWEQAEQLFEEIRSKGYRLNRSLYHMLMKIYRDACNHSKAEQLLASMKEDGIEP 902
Query: 340 DICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIY 399
I + ++++Y A + AEK LK + + Y T+ Y K + +
Sbjct: 903 TIATMHILMTSYGTAGHPDEAEKVLNSLKSSSLEVSTLPYSTVFNAYLKNGDYNLGITKL 962
Query: 400 DKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGF 442
+M+ +G+KP+ ++T + A + A++ + C F
Sbjct: 963 LEMKADGVKPDHQVWTCFIRAASLCERTADAILLLNSLRDCEF 1005
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 77/346 (22%), Positives = 163/346 (47%), Gaps = 5/346 (1%)
Query: 112 FNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQI 171
++ K+L +G+ P S ++++AY G+++ ++ + ++ P L +
Sbjct: 427 ISQGAKLLKKACLQGHEPDSKSLLSILDAYETTGKHEEGLSLLQFIREHVPSSCNLISEC 486
Query: 172 ILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMA 231
+ L + K A + + ++ + D ++ +I ++A + +A ++F+ M
Sbjct: 487 SIMLLCKNQKIAAAMQEYSSMQMLKCGSFGQDCNLYEYLITCLEEAEFFPEASQVFSDMQ 546
Query: 232 ERGVQQSTVTYNSLMS--FETNYKEVS-KIYDQMQRAGLQPDVVSYAL-LINAYGKARRE 287
G++ S Y S++S + + E + ++ D+ ++G+ +++S + +I AYGK +
Sbjct: 547 FIGIEPSRKIYESMISAYCKLGFPETAHQLMDEAVQSGISLNILSSRVTMIEAYGKIKLW 606
Query: 288 EEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTM 347
+ A F + L + +N L+ A+A SG+ + AR VF M P I S M
Sbjct: 607 QHA-ENFVKGLKQEPSIDRRIWNALIHAYAESGLYEHARAVFDIMIEKGPLPTIDSVNGM 665
Query: 348 LSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGI 407
+ A + ++ + L+ GF + T ++ + K ++ ++M+IY+ M+ G
Sbjct: 666 MRALIIDGRLDELYVIVQELQDMGFKISKSTVILMLDAFTKAGDIFEVMKIYNGMKEAGY 725
Query: 408 KPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILL 453
PN I+ +++ +NK + + EME GF PD N LL
Sbjct: 726 LPNMHIYRSMISLLCRNKRYRDVELMVVEMERAGFEPDLTILNTLL 771
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/138 (23%), Positives = 64/138 (46%), Gaps = 4/138 (2%)
Query: 74 KKWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVS 133
K W ++ E +R + + N + ML+ Y + +KAE++L+ M + G P++ +
Sbjct: 848 KLWEQAEQLFEEIRSKGY-RLNRSLYHMLMKIYRDACNHSKAEQLLASMKEDGIEPTIAT 906
Query: 134 HTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLL 193
LM +YG G AE + ++SS S L Y + +++ + LL
Sbjct: 907 MHILMTSYGTAGHPDEAEKVLNSLKSSSLEVSTLPYSTVFNAYLKNGDYNLG---ITKLL 963
Query: 194 DEEKSPLKPDQKMFHMMI 211
+ + +KPD +++ I
Sbjct: 964 EMKADGVKPDHQVWTCFI 981
>gi|242041853|ref|XP_002468321.1| hypothetical protein SORBIDRAFT_01g043770 [Sorghum bicolor]
gi|241922175|gb|EER95319.1| hypothetical protein SORBIDRAFT_01g043770 [Sorghum bicolor]
Length = 794
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 123/477 (25%), Positives = 210/477 (44%), Gaps = 30/477 (6%)
Query: 59 PKDLVLGTLV----RLKQLKKWNVVSEVLEWLRIQS-WWDFNEMDFLMLITAYGKQGDFN 113
P TLV RL +K+ V E + + W +N +L + G +
Sbjct: 278 PTRATYNTLVSAYARLGWIKQATNVVEAMTAFGFEPDLWTYN-----VLAAGLCQAGKVD 332
Query: 114 KAEKVLSFMNKKG-YAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQII 172
+A K+ M +P VV++ L++A + R +A + M+ G + S +T+ I+
Sbjct: 333 EAFKLKDEMEHLSIVSPDVVTYNTLVDACFKYQRSSDALNLLEEMRDKGVKSSLVTHNIV 392
Query: 173 LKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAE 232
+K + +EA + +E L PD ++ +I Y KA KA L M
Sbjct: 393 VKGLCREGQLEEALGRLKMMTEEG---LAPDVITYNTLIDAYCKARNVAKAFVLMDEMVR 449
Query: 233 RGVQQSTVTYNSLM---SFETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEE 289
G++ T T N+L+ E Y+E ++ + G PD VSY ++ AY K + E
Sbjct: 450 SGLKMDTFTLNTLLYNLCKEKRYEEAEELLRSPPQRGFVPDEVSYGTVMAAYFKENKPEP 509
Query: 290 ALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLS 349
AL +++EM + P+ YN L+ G + +A + + PD +Y ++
Sbjct: 510 ALYLWDEMSKRKLTPSIYTYNTLIKGLCTIGKLTEAIDKLNELMKKGLVPDDTTYNIIIH 569
Query: 350 AYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKP 409
AY D+E A +F ++ ++ F P+V+T TL+ G LEK +++++ G K
Sbjct: 570 AYCKEGDLEKAFQFHNKMLENYFKPDVVTCNTLMNGLCLHGKLEKAIKLFESWAEKGKKV 629
Query: 410 NQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELL 469
+ + T++ A K+ D D+A+ ++ +ME+ G PD N++LS A EA +L
Sbjct: 630 DVITYNTLIQALCKDGDVDTALHFFADMEARGLQPDAFTYNVVLSALSEAGRSEEAQNML 689
Query: 470 ------GNFNHPNNEPGINGLSISVDEEDDDDDDDEDDDDNIYHDGDGDGDGDDNED 520
G + + P I S EE D E D + G+ G D E
Sbjct: 690 HKLDESGKLSERFSYPLIK----SSAEEVKTGKDPEVKSDC---ESGGNAKGGDQES 739
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 114/453 (25%), Positives = 187/453 (41%), Gaps = 46/453 (10%)
Query: 44 AVAVLRSERTRGQPLPK----DLVLGTLVRLKQLKKWNV--VSEVLEWLRIQSWWDFNEM 97
A +L S R RG P + VL L R V L LR+ N
Sbjct: 156 AAQLLHSFRRRGHVRPSLQAANAVLSALARSPSTSPQASLDVFRSLIALRLHP----NHY 211
Query: 98 DFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRM 157
F +L+ + +G A LS M G +P VV++ L++A+ R G A + RM
Sbjct: 212 TFNLLVHTHCSKGTLADALSTLSTMQGFGLSPDVVTYNTLLKAHCRKGMLGEARTLLARM 271
Query: 158 QSSGPRPSALTYQIILKLFVEANKFKEAEEVF--MTLLD--------------------- 194
+ G P+ TY ++ + K+A V MT
Sbjct: 272 KKEGIAPTRATYNTLVSAYARLGWIKQATNVVEAMTAFGFEPDLWTYNVLAAGLCQAGKV 331
Query: 195 ----------EEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNS 244
E S + PD ++ ++ K A L M ++GV+ S VT+N
Sbjct: 332 DEAFKLKDEMEHLSIVSPDVVTYNTLVDACFKYQRSSDALNLLEEMRDKGVKSSLVTHNI 391
Query: 245 L---MSFETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAG 301
+ + E +E M GL PDV++Y LI+AY KAR +A + +EM+ +G
Sbjct: 392 VVKGLCREGQLEEALGRLKMMTEEGLAPDVITYNTLIDAYCKARNVAKAFVLMDEMVRSG 451
Query: 302 VRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAE 361
++ N LL ++A + + + PD SY T+++AY + E A
Sbjct: 452 LKMDTFTLNTLLYNLCKEKRYEEAEELLRSPPQRGFVPDEVSYGTVMAAYFKENKPEPAL 511
Query: 362 KFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAY 421
+ + + P++ TY TLIKG + L + ++ +++ G+ P+ T + I+ AY
Sbjct: 512 YLWDEMSKRKLTPSIYTYNTLIKGLCTIGKLTEAIDKLNELMKKGLVPDDTTYNIIIHAY 571
Query: 422 GKNKDFDSAVVWYKEMESCGFPPDQKAKNILLS 454
K D + A ++ +M F PD N L++
Sbjct: 572 CKEGDLEKAFQFHNKMLENYFKPDVVTCNTLMN 604
Score = 99.4 bits (246), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 69/274 (25%), Positives = 117/274 (42%), Gaps = 4/274 (1%)
Query: 200 LKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETN---YKEVS 256
L P+ F+++++ + G A + M G+ VTYN+L+ E
Sbjct: 206 LHPNHYTFNLLVHTHCSKGTLADALSTLSTMQGFGLSPDVVTYNTLLKAHCRKGMLGEAR 265
Query: 257 KIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAF 316
+ +M++ G+ P +Y L++AY + ++A V E M G P YN+L
Sbjct: 266 TLLARMKKEGIAPTRATYNTLVSAYARLGWIKQATNVVEAMTAFGFEPDLWTYNVLAAGL 325
Query: 317 AISGMVDQARTVFKCMRR-DRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPN 375
+G VD+A + M SPD+ +Y T++ A A ++ G +
Sbjct: 326 CQAGKVDEAFKLKDEMEHLSIVSPDVVTYNTLVDACFKYQRSSDALNLLEEMRDKGVKSS 385
Query: 376 VITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYK 435
++T+ ++KG + LE+ + M G+ P+ + T++DAY K ++ A V
Sbjct: 386 LVTHNIVVKGLCREGQLEEALGRLKMMTEEGLAPDVITYNTLIDAYCKARNVAKAFVLMD 445
Query: 436 EMESCGFPPDQKAKNILLSLAKTADERNEANELL 469
EM G D N LL EA ELL
Sbjct: 446 EMVRSGLKMDTFTLNTLLYNLCKEKRYEEAEELL 479
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 84/400 (21%), Positives = 154/400 (38%), Gaps = 79/400 (19%)
Query: 101 MLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSS 160
+++ ++G +A L M ++G AP V+++ L++AY + A + M S
Sbjct: 391 IVVKGLCREGQLEEALGRLKMMTEEGLAPDVITYNTLIDAYCKARNVAKAFVLMDEMVRS 450
Query: 161 GPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGY 220
G + T +L + +++EAEE+ L + PD+ + ++ Y K
Sbjct: 451 GLKMDTFTLNTLLYNLCKEKRYEEAEEL---LRSPPQRGFVPDEVSYGTVMAAYFKENKP 507
Query: 221 EKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSKIYD---QMQRAGLQPDVVSYALL 277
E A L+ M++R + S TYN+L+ ++++ D ++ + GL PD +Y ++
Sbjct: 508 EPALYLWDEMSKRKLTPSIYTYNTLIKGLCTIGKLTEAIDKLNELMKKGLVPDDTTYNII 567
Query: 278 INAYGK-----------------------------------ARREEEALAVFEEMLDAGV 302
I+AY K + E+A+ +FE + G
Sbjct: 568 IHAYCKEGDLEKAFQFHNKMLENYFKPDVVTCNTLMNGLCLHGKLEKAIKLFESWAEKGK 627
Query: 303 RPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEK 362
+ YN L+ A G VD A F M PD +Y +LSA A E A+
Sbjct: 628 KVDVITYNTLIQALCKDGDVDTALHFFADMEARGLQPDAFTYNVVLSALSEAGRSEEAQN 687
Query: 363 FFRRLKQDGFVPNVITYGTLIKGYAKV--------------------------------- 389
+L + G + +Y LIK A+
Sbjct: 688 MLHKLDESGKLSERFSY-PLIKSSAEEVKTGKDPEVKSDCESGGNAKGGDQESYNKSVKE 746
Query: 390 ----NNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNK 425
L++ + D+M G+ + + + T+M+ K +
Sbjct: 747 LCVGGQLKEAKAVLDEMMQKGMSVDSSTYITLMEGLIKRQ 786
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 80/175 (45%), Gaps = 2/175 (1%)
Query: 302 VRPTHKAYNILLDAFAISGMVDQART--VFKCMRRDRCSPDICSYTTMLSAYVNASDMEG 359
VRP+ +A N +L A A S + VF+ + R P+ ++ ++ + + +
Sbjct: 169 VRPSLQAANAVLSALARSPSTSPQASLDVFRSLIALRLHPNHYTFNLLVHTHCSKGTLAD 228
Query: 360 AEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMD 419
A ++ G P+V+TY TL+K + + L + + +M+ GI P + + T++
Sbjct: 229 ALSTLSTMQGFGLSPDVVTYNTLLKAHCRKGMLGEARTLLARMKKEGIAPTRATYNTLVS 288
Query: 420 AYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNH 474
AY + A + M + GF PD N+L + A + +EA +L H
Sbjct: 289 AYARLGWIKQATNVVEAMTAFGFEPDLWTYNVLAAGLCQAGKVDEAFKLKDEMEH 343
>gi|413955492|gb|AFW88141.1| hypothetical protein ZEAMMB73_138069 [Zea mays]
Length = 1091
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 100/419 (23%), Positives = 192/419 (45%), Gaps = 35/419 (8%)
Query: 99 FLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQ 158
+ +L+ A+GK+ D + +L+ M +G P+V S+T + G+ R+ A I +M+
Sbjct: 209 YSVLMVAFGKKRDVDTVLWLLNEMEARGVKPNVYSYTICIRVLGQAARFDEAYHILGKME 268
Query: 159 SSGPRPSALTYQIILKLFVEANKFKEAEEVF---------------MTLLD------EEK 197
SG +P +T+ +I+++ +A + +A+ VF +TLLD + +
Sbjct: 269 DSGCKPDVVTHTVIIQVLCDAGRLSDAKAVFWKMKASDQKPDRVTYITLLDKCGDSGDSQ 328
Query: 198 SPLKPDQKM-----------FHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLM 246
S ++ M + ++ + G ++A +F M E+G+ +YNSL+
Sbjct: 329 SVVEVWNAMVADGYNDNIVSYTAVVDALCQVGRVDEALAVFDEMKEKGMSPEQYSYNSLI 388
Query: 247 SFETN---YKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVR 303
S + ++++ M G P+ ++ L IN YGK+ + +A+ +E M G+
Sbjct: 389 SGFLKADMFDRALELFNHMNACGPSPNGYTHVLFINYYGKSGQSLKAIQRYEHMKSKGIV 448
Query: 304 PTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKF 363
P A N +L + A SG + A+ VF ++ SPD +YT M+ AS + A F
Sbjct: 449 PDVAAANAVLYSLAGSGRLGMAKRVFYELKAMGVSPDTITYTMMIKCCSKASKADEAMNF 508
Query: 364 FRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGK 423
F + + G VP+V+ +LI K + +++ K++ I+P + T++ G+
Sbjct: 509 FSDMVESGCVPDVLALNSLIDTLYKGGKGNEAWQLFHKLKEMKIEPTNGTYNTLLSGLGR 568
Query: 424 NKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGIN 482
+ +EM +PP+ N +L E N A ++L + P ++
Sbjct: 569 EGKVKEVMQLLEEMTRTIYPPNLITYNTVLDCLSKNGEVNCAIDMLYSMTEKGCAPDLS 627
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 107/440 (24%), Positives = 189/440 (42%), Gaps = 43/440 (9%)
Query: 70 LKQLKKWNVVSEVLEWLR--IQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGY 127
L L + V EV++ L ++ + N + + ++ K G+ N A +L M +KG
Sbjct: 563 LSGLGREGKVKEVMQLLEEMTRTIYPPNLITYNTVLDCLSKNGEVNCAIDMLYSMTEKGC 622
Query: 128 APSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEE 187
AP + S+ +M + R + A +F +M+ P T IL FV+ KEA
Sbjct: 623 APDLSSYNTVMYGLIKEERLEEAFRMFCQMKKI-LAPDYATLCTILPSFVKNGLMKEALH 681
Query: 188 VFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEK------------------------- 222
+ K+ D+ FH ++ K G EK
Sbjct: 682 TVKEYI--LKAGCNVDKSSFHSLMEGILKKAGVEKSIEFAENIASRGILLNDFFLCPLIR 739
Query: 223 ----------ARKLFALMAERGVQQSTVTYNSLMS--FETNYKEVSK-IYDQMQRAGLQP 269
A +LF GV T +YNSL+ + N ++++ ++ +M+R G P
Sbjct: 740 HLCKHKKALEAHQLFNKFKGLGVSLKTGSYNSLIRGLVDENLIDIAEDLFTEMKRLGCGP 799
Query: 270 DVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVF 329
D +Y L+++A GK+ R EE L V +EM G T+ YN ++ S ++QA ++
Sbjct: 800 DEFTYNLILDAMGKSMRVEEMLKVQKEMHRKGYESTYVTYNTIISGLVKSKRLEQAIDLY 859
Query: 330 KCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKV 389
+ + SP C+Y +L + + M AE F + + G PN Y L+ G+
Sbjct: 860 YNLMSEGFSPTPCTYGPLLDGLLKSGKMVDAENLFNEMLEYGCEPNCTIYNILLNGHRIA 919
Query: 390 NNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAK 449
N E + ++++KM GI P+ +T ++D + + +++++ G PD
Sbjct: 920 GNTENVCQLFEKMVEQGINPDIKSYTILIDTLCTAGRLNDGLCYFRQLHELGLEPDLIVY 979
Query: 450 NILLSLAKTADERNEANELL 469
N+L+ ++ EA L
Sbjct: 980 NLLIDGLGKSERIEEAVSLF 999
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 94/365 (25%), Positives = 168/365 (46%), Gaps = 10/365 (2%)
Query: 99 FLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQ 158
L L+ A+G+ GD +V M K+ +V + + G G ++A M+
Sbjct: 107 MLELMRAHGRVGDM---AQVFDLMQKQVVKTNVGTFATIFGGVGVEGGLRSAPVALPVMR 163
Query: 159 SSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAG 218
+G +A TY ++ V++ EA EV+ ++++ SP + + +++ + K
Sbjct: 164 EAGMSLNAYTYNGLIYFLVKSGFDAEAMEVYKAMVEDGISP---SVRTYSVLMVAFGKKR 220
Query: 219 GYEKARKLFALMAERGVQQSTVTYN---SLMSFETNYKEVSKIYDQMQRAGLQPDVVSYA 275
+ L M RGV+ + +Y ++ + E I +M+ +G +PDVV++
Sbjct: 221 DVDTVLWLLNEMEARGVKPNVYSYTICIRVLGQAARFDEAYHILGKMEDSGCKPDVVTHT 280
Query: 276 LLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRD 335
++I A R +A AVF +M + +P Y LLD SG V+ M D
Sbjct: 281 VIIQVLCDAGRLSDAKAVFWKMKASDQKPDRVTYITLLDKCGDSGDSQSVVEVWNAMVAD 340
Query: 336 RCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKM 395
+ +I SYT ++ A ++ A F +K+ G P +Y +LI G+ K + ++
Sbjct: 341 GYNDNIVSYTAVVDALCQVGRVDEALAVFDEMKEKGMSPEQYSYNSLISGFLKADMFDRA 400
Query: 396 MEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKN-ILLS 454
+E+++ M G PN ++ YGK+ A+ Y+ M+S G PD A N +L S
Sbjct: 401 LELFNHMNACGPSPNGYTHVLFINYYGKSGQSLKAIQRYEHMKSKGIVPDVAAANAVLYS 460
Query: 455 LAKTA 459
LA +
Sbjct: 461 LAGSG 465
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 74/303 (24%), Positives = 149/303 (49%), Gaps = 6/303 (1%)
Query: 115 AEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILK 174
AE + + M + G P ++ +++A G+ R + + + M G + +TY I+
Sbjct: 785 AEDLFTEMKRLGCGPDEFTYNLILDAMGKSMRVEEMLKVQKEMHRKGYESTYVTYNTIIS 844
Query: 175 LFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERG 234
V++ + ++A +++ L+ E SP + ++ K+G A LF M E G
Sbjct: 845 GLVKSKRLEQAIDLYYNLMSEGFSP---TPCTYGPLLDGLLKSGKMVDAENLFNEMLEYG 901
Query: 235 VQQSTVTYNSLMS---FETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEAL 291
+ + YN L++ N + V +++++M G+ PD+ SY +LI+ A R + L
Sbjct: 902 CEPNCTIYNILLNGHRIAGNTENVCQLFEKMVEQGINPDIKSYTILIDTLCTAGRLNDGL 961
Query: 292 AVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAY 351
F ++ + G+ P YN+L+D S +++A ++F M++ P++ +Y +++
Sbjct: 962 CYFRQLHELGLEPDLIVYNLLIDGLGKSERIEEAVSLFNEMKKKGIIPNLYTYNSLILHL 1021
Query: 352 VNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQ 411
A A + + L + G+ P+V TY LI+GY+ + + Y +M V G +PN
Sbjct: 1022 GKAGKAAEAAQMYEELLRKGWKPSVFTYNALIRGYSVSGSTDNAYAAYGQMIVGGCQPNS 1081
Query: 412 TIF 414
+ +
Sbjct: 1082 STY 1084
Score = 122 bits (305), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 85/366 (23%), Positives = 169/366 (46%), Gaps = 6/366 (1%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
+ + ++ L+ G GD +V + M GY ++VS+TA+++A + GR A A+F
Sbjct: 310 DRVTYITLLDKCGDSGDSQSVVEVWNAMVADGYNDNIVSYTAVVDALCQVGRVDEALAVF 369
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
M+ G P +Y ++ F++A+ F A E+F + SP +F I Y
Sbjct: 370 DEMKEKGMSPEQYSYNSLISGFLKADMFDRALELFNHMNACGPSPNGYTHVLF---INYY 426
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSLM---SFETNYKEVSKIYDQMQRAGLQPDV 271
K+G KA + + M +G+ N+++ + +++ +++ G+ PD
Sbjct: 427 GKSGQSLKAIQRYEHMKSKGIVPDVAAANAVLYSLAGSGRLGMAKRVFYELKAMGVSPDT 486
Query: 272 VSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKC 331
++Y ++I KA + +EA+ F +M+++G P A N L+D G ++A +F
Sbjct: 487 ITYTMMIKCCSKASKADEAMNFFSDMVESGCVPDVLALNSLIDTLYKGGKGNEAWQLFHK 546
Query: 332 MRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNN 391
++ + P +Y T+LS ++ + + + + PN+ITY T++ +K
Sbjct: 547 LKEMKIEPTNGTYNTLLSGLGREGKVKEVMQLLEEMTRTIYPPNLITYNTVLDCLSKNGE 606
Query: 392 LEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNI 451
+ +++ M G P+ + + T+M K + + A + +M+ P I
Sbjct: 607 VNCAIDMLYSMTEKGCAPDLSSYNTVMYGLIKEERLEEAFRMFCQMKKILAPDYATLCTI 666
Query: 452 LLSLAK 457
L S K
Sbjct: 667 LPSFVK 672
Score = 115 bits (288), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 76/272 (27%), Positives = 129/272 (47%), Gaps = 7/272 (2%)
Query: 218 GGYEKARKLFALMAERGVQQSTVTYNSLMSFETNY---KEVSKIYDQMQRAGLQPDVVSY 274
GG A +M E G+ + TYN L+ F E ++Y M G+ P V +Y
Sbjct: 150 GGLRSAPVALPVMREAGMSLNAYTYNGLIYFLVKSGFDAEAMEVYKAMVEDGISPSVRTY 209
Query: 275 ALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRR 334
++L+ A+GK R + L + EM GV+P +Y I + + D+A + M
Sbjct: 210 SVLMVAFGKKRDVDTVLWLLNEMEARGVKPNVYSYTICIRVLGQAARFDEAYHILGKMED 269
Query: 335 DRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEK 394
C PD+ ++T ++ +A + A+ F ++K P+ +TY TL+ + +
Sbjct: 270 SGCKPDVVTHTVIIQVLCDAGRLSDAKAVFWKMKASDQKPDRVTYITLLDKCGDSGDSQS 329
Query: 395 MMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLS 454
++E+++ M +G N +T ++DA + D A+ + EM+ G P+Q + N L+S
Sbjct: 330 VVEVWNAMVADGYNDNIVSYTAVVDALCQVGRVDEALAVFDEMKEKGMSPEQYSYNSLIS 389
Query: 455 LAKTADERNEANELLGNFNHPN-NEPGINGLS 485
AD + A EL FNH N P NG +
Sbjct: 390 GFLKADMFDRALEL---FNHMNACGPSPNGYT 418
Score = 111 bits (278), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 84/398 (21%), Positives = 171/398 (42%), Gaps = 6/398 (1%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N F + G +G A L M + G + + ++ L+ + G A ++
Sbjct: 135 NVGTFATIFGGVGVEGGLRSAPVALPVMREAGMSLNAYTYNGLIYFLVKSGFDAEAMEVY 194
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
+ M G PS TY +++ F K ++ + V L + E +KP+ + + I +
Sbjct: 195 KAMVEDGISPSVRTYSVLMVAF---GKKRDVDTVLWLLNEMEARGVKPNVYSYTICIRVL 251
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVS---KIYDQMQRAGLQPDV 271
+A +++A + M + G + VT+ ++ + +S ++ +M+ + +PD
Sbjct: 252 GQAARFDEAYHILGKMEDSGCKPDVVTHTVIIQVLCDAGRLSDAKAVFWKMKASDQKPDR 311
Query: 272 VSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKC 331
V+Y L++ G + + + V+ M+ G +Y ++DA G VD+A VF
Sbjct: 312 VTYITLLDKCGDSGDSQSVVEVWNAMVADGYNDNIVSYTAVVDALCQVGRVDEALAVFDE 371
Query: 332 MRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNN 391
M+ SP+ SY +++S ++ A + A + F + G PN T+ I Y K
Sbjct: 372 MKEKGMSPEQYSYNSLISGFLKADMFDRALELFNHMNACGPSPNGYTHVLFINYYGKSGQ 431
Query: 392 LEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNI 451
K ++ Y+ M+ GI P+ ++ + + A + E+++ G PD +
Sbjct: 432 SLKAIQRYEHMKSKGIVPDVAAANAVLYSLAGSGRLGMAKRVFYELKAMGVSPDTITYTM 491
Query: 452 LLSLAKTADERNEANELLGNFNHPNNEPGINGLSISVD 489
++ A + +EA + P + L+ +D
Sbjct: 492 MIKCCSKASKADEAMNFFSDMVESGCVPDVLALNSLID 529
Score = 111 bits (278), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 77/307 (25%), Positives = 147/307 (47%), Gaps = 6/307 (1%)
Query: 150 AEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHM 209
A +F + + G +Y +++ V+ N AE++F + ++ PD+ +++
Sbjct: 750 AHQLFNKFKGLGVSLKTGSYNSLIRGLVDENLIDIAEDLFTEM---KRLGCGPDEFTYNL 806
Query: 210 MIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSK---IYDQMQRAG 266
++ K+ E+ K+ M +G + + VTYN+++S K + + +Y + G
Sbjct: 807 ILDAMGKSMRVEEMLKVQKEMHRKGYESTYVTYNTIISGLVKSKRLEQAIDLYYNLMSEG 866
Query: 267 LQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQAR 326
P +Y L++ K+ + +A +F EML+ G P YNILL+ I+G +
Sbjct: 867 FSPTPCTYGPLLDGLLKSGKMVDAENLFNEMLEYGCEPNCTIYNILLNGHRIAGNTENVC 926
Query: 327 TVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGY 386
+F+ M +PDI SYT ++ A + +FR+L + G P++I Y LI G
Sbjct: 927 QLFEKMVEQGINPDIKSYTILIDTLCTAGRLNDGLCYFRQLHELGLEPDLIVYNLLIDGL 986
Query: 387 AKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQ 446
K +E+ + ++++M+ GI PN + +++ GK A Y+E+ G+ P
Sbjct: 987 GKSERIEEAVSLFNEMKKKGIIPNLYTYNSLILHLGKAGKAAEAAQMYEELLRKGWKPSV 1046
Query: 447 KAKNILL 453
N L+
Sbjct: 1047 FTYNALI 1053
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 77/177 (43%)
Query: 305 THKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFF 364
T ++ N +L+ G V VF M++ ++ ++ T+ + A
Sbjct: 100 TTESCNYMLELMRAHGRVGDMAQVFDLMQKQVVKTNVGTFATIFGGVGVEGGLRSAPVAL 159
Query: 365 RRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKN 424
+++ G N TY LI K + ME+Y M +GI P+ ++ +M A+GK
Sbjct: 160 PVMREAGMSLNAYTYNGLIYFLVKSGFDAEAMEVYKAMVEDGISPSVRTYSVLMVAFGKK 219
Query: 425 KDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGI 481
+D D+ + EME+ G P+ + I + + A +EA +LG +P +
Sbjct: 220 RDVDTVLWLLNEMEARGVKPNVYSYTICIRVLGQAARFDEAYHILGKMEDSGCKPDV 276
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/274 (20%), Positives = 109/274 (39%), Gaps = 39/274 (14%)
Query: 210 MIYMYKKAGGYEKARKLFALMAERGVQ-QSTVTYN---SLMSFETNYKEVSKIYDQMQRA 265
+++M + A +A +LF A + + +T + N LM ++++++D MQ+
Sbjct: 71 VVHMLRSAPDPAEALELFTAAARQPTKVHTTESCNYMLELMRAHGRVGDMAQVFDLMQKQ 130
Query: 266 GLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQA 325
++ +V ++A + G A M +AG+ YN L+ SG +A
Sbjct: 131 VVKTNVGTFATIFGGVGVEGGLRSAPVALPVMREAGMSLNAYTYNGLIYFLVKSGFDAEA 190
Query: 326 RTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKG 385
V+K M +DG P+V TY L+
Sbjct: 191 MEVYKAMV-----------------------------------EDGISPSVRTYSVLMVA 215
Query: 386 YAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPD 445
+ K +++ ++ + ++M G+KPN +T + G+ FD A +ME G PD
Sbjct: 216 FGKKRDVDTVLWLLNEMEARGVKPNVYSYTICIRVLGQAARFDEAYHILGKMEDSGCKPD 275
Query: 446 QKAKNILLSLAKTADERNEANELLGNFNHPNNEP 479
+++ + A ++A + + +P
Sbjct: 276 VVTHTVIIQVLCDAGRLSDAKAVFWKMKASDQKP 309
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 52/251 (20%), Positives = 103/251 (41%), Gaps = 46/251 (18%)
Query: 62 LVLGTLVRLKQLKKWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSF 121
L+ G L K + N+ +E+LE+ + N + +L+ + G+ ++
Sbjct: 877 LLDGLLKSGKMVDAENLFNEMLEY-----GCEPNCTIYNILLNGHRIAGNTENVCQLFEK 931
Query: 122 MNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANK 181
M ++G P + S+T L++ GR + FR++ G P + Y +++ +
Sbjct: 932 MVEQGINPDIKSYTILIDTLCTAGRLNDGLCYFRQLHELGLEPDLIVYNLLI------DG 985
Query: 182 FKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVT 241
++E + E+A LF M ++G+ + T
Sbjct: 986 LGKSERI--------------------------------EEAVSLFNEMKKKGIIPNLYT 1013
Query: 242 YNSL---MSFETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEML 298
YNSL + E +++Y+++ R G +P V +Y LI Y + + A A + +M+
Sbjct: 1014 YNSLILHLGKAGKAAEAAQMYEELLRKGWKPSVFTYNALIRGYSVSGSTDNAYAAYGQMI 1073
Query: 299 DAGVRPTHKAY 309
G +P Y
Sbjct: 1074 VGGCQPNSSTY 1084
>gi|357439849|ref|XP_003590202.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355479250|gb|AES60453.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 772
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 100/428 (23%), Positives = 184/428 (42%), Gaps = 29/428 (6%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + L+ AY + D +++L M K+ SV +++ L++ Y G + AE IF
Sbjct: 251 NVFTYNTLLNAYVGRKDRKGVDEILKLMEKEQVVFSVATYSILIQWYSSSGDIEEAEKIF 310
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDE-EKSPLKPDQKMFHMMIYM 213
M+ Y ++ K A L DE + + P+ + +I
Sbjct: 311 EEMREKNIEMDVYVYSSMISWSRRLGNMKRA----FALFDEMSQRDIVPNAHTYGALIGG 366
Query: 214 YKKAGGYEKARKLFALMAERGVQQSTVTYNSLM---SFETNYKEVSKIYDQMQRAGLQPD 270
KAG E A L M +GV + V +N+ M E ++ M++ G+ D
Sbjct: 367 VCKAGQMEAAEILLLEMQSKGVDLNLVIFNTTMDGYCRRGKMDEALRLQAIMEKKGINAD 426
Query: 271 VVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFK 330
V +Y +L N K R +EA + M++ GV+P + + ++ + G + +A +F+
Sbjct: 427 VFTYNILANGLCKLHRYDEAKCILNSMVEKGVKPNVVTFTMFIEIYCKEGNLAEAERLFR 486
Query: 331 CMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVN 390
M + P+I +Y T++ AY ++ A K + G +P++ TY +LI G V
Sbjct: 487 DMEKKGEVPNIITYNTLIDAYCKKEKVKQAHKIKSEMINKGLLPDLYTYSSLIHGECIVG 546
Query: 391 NLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKN 450
+++ ++++++MR+ GI N +T+++ K D A Y EM G PD +
Sbjct: 547 RVDEALKLFNEMRLKGITRNVATYTSMISGLSKEGRADEAFKLYDEMMKIGLIPDDRV-- 604
Query: 451 ILLSLAKTADERNEANELLGNFNHPNNEPGINGLSISVDEEDDDDDDDEDDDDNIYHDGD 510
L+G+F+ P G++ + + D D ++ +
Sbjct: 605 --------------FTSLVGSFHKPLTHAGLD-----IQKASDSDSVLRRENCCTWPLIS 645
Query: 511 GDGDGDDN 518
+ DG DN
Sbjct: 646 AEHDGQDN 653
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 88/333 (26%), Positives = 161/333 (48%), Gaps = 6/333 (1%)
Query: 94 FNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAI 153
F+ + +LI Y GD +AEK+ M +K V +++++ R G K A A+
Sbjct: 285 FSVATYSILIQWYSSSGDIEEAEKIFEEMREKNIEMDVYVYSSMISWSRRLGNMKRAFAL 344
Query: 154 FRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYM 213
F M P+A TY ++ +A + + AE + LL+ + + + +F+ +
Sbjct: 345 FDEMSQRDIVPNAHTYGALIGGVCKAGQMEAAE---ILLLEMQSKGVDLNLVIFNTTMDG 401
Query: 214 YKKAGGYEKARKLFALMAERGVQQSTVTYNSL---MSFETNYKEVSKIYDQMQRAGLQPD 270
Y + G ++A +L A+M ++G+ TYN L + Y E I + M G++P+
Sbjct: 402 YCRRGKMDEALRLQAIMEKKGINADVFTYNILANGLCKLHRYDEAKCILNSMVEKGVKPN 461
Query: 271 VVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFK 330
VV++ + I Y K EA +F +M G P YN L+DA+ V QA +
Sbjct: 462 VVTFTMFIEIYCKEGNLAEAERLFRDMEKKGEVPNIITYNTLIDAYCKKEKVKQAHKIKS 521
Query: 331 CMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVN 390
M PD+ +Y++++ ++ A K F ++ G NV TY ++I G +K
Sbjct: 522 EMINKGLLPDLYTYSSLIHGECIVGRVDEALKLFNEMRLKGITRNVATYTSMISGLSKEG 581
Query: 391 NLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGK 423
++ ++YD+M G+ P+ +FT+++ ++ K
Sbjct: 582 RADEAFKLYDEMMKIGLIPDDRVFTSLVGSFHK 614
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 113/227 (49%), Gaps = 6/227 (2%)
Query: 93 DFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEA 152
D N + F + Y ++G ++A ++ + M KKG V ++ L + RY A+
Sbjct: 389 DLNLVIFNTTMDGYCRRGKMDEALRLQAIMEKKGINADVFTYNILANGLCKLHRYDEAKC 448
Query: 153 IFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIY 212
I M G +P+ +T+ + ++++ + EAE +F D EK P+ ++ +I
Sbjct: 449 ILNSMVEKGVKPNVVTFTMFIEIYCKEGNLAEAERLFR---DMEKKGEVPNIITYNTLID 505
Query: 213 MYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFET---NYKEVSKIYDQMQRAGLQP 269
Y K ++A K+ + M +G+ TY+SL+ E E K++++M+ G+
Sbjct: 506 AYCKKEKVKQAHKIKSEMINKGLLPDLYTYSSLIHGECIVGRVDEALKLFNEMRLKGITR 565
Query: 270 DVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAF 316
+V +Y +I+ K R +EA +++EM+ G+ P + + L+ +F
Sbjct: 566 NVATYTSMISGLSKEGRADEAFKLYDEMMKIGLIPDDRVFTSLVGSF 612
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 46/222 (20%), Positives = 108/222 (48%), Gaps = 6/222 (2%)
Query: 252 YKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAG---VRPTHKA 308
+ E ++YD ++ GL + S +L+ A + + + F M+++ +R ++
Sbjct: 161 FDETIRVYDYVEEKGLVIEERSCFVLLLALKRCGEVDFCVRFFHRMVESNKFEIRV--QS 218
Query: 309 YNILLDAFAISGMVDQARTVFKCMR-RDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRL 367
+++D G V++A+ + M + P++ +Y T+L+AYV D +G ++ + +
Sbjct: 219 LTLVIDVLCRRGEVEKAKELMDEMVGKGIVKPNVFTYNTLLNAYVGRKDRKGVDEILKLM 278
Query: 368 KQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDF 427
+++ V +V TY LI+ Y+ ++E+ +I+++MR I+ + ++++++ + +
Sbjct: 279 EKEQVVFSVATYSILIQWYSSSGDIEEAEKIFEEMREKNIEMDVYVYSSMISWSRRLGNM 338
Query: 428 DSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELL 469
A + EM P+ L+ A + A LL
Sbjct: 339 KRAFALFDEMSQRDIVPNAHTYGALIGGVCKAGQMEAAEILL 380
>gi|218184398|gb|EEC66825.1| hypothetical protein OsI_33257 [Oryza sativa Indica Group]
Length = 948
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 105/416 (25%), Positives = 190/416 (45%), Gaps = 14/416 (3%)
Query: 44 AVAVLRSERTRGQPLPKDLVLGTLVRLKQLKKWNVVSEVLEWLRIQSWWDF--NEMDFLM 101
A+A+ R R + P G R L + +E L LR + + + +
Sbjct: 158 ALALYRRMVHRDRVPPTTFTFGVAAR--ALCRLGRANEALALLRGMARHGCVPDAVLYQT 215
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
+I A QG +A +L+ M G A V + ++ GR + A + RM + G
Sbjct: 216 VIHALCDQGGVTEAATLLNEMLLMGCAADVNTFDDVVRGMCGLGRVREAARLVDRMMTKG 275
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
P +TY +L+ + EA + + P + + +F+ +I G
Sbjct: 276 CMPGVMTYGFLLQGLCRVRQADEARAML------GRVP-ELNVVLFNTVIGGCLAEGKLA 328
Query: 222 KARKLFALMAERGVQQSTVTYNSLMSFETNYKEVS---KIYDQMQRAGLQPDVVSYALLI 278
+A +L+ M +G Q TY+ LM +S ++ +M++ G P+VV+Y +++
Sbjct: 329 EATELYETMGLKGCQPDAHTYSILMHGLCKLGRISSAVRLLREMEKKGFAPNVVTYTIVL 388
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCS 338
+++ K ++ A+ EEM G+ + YN ++ A G +D+A + + MR C+
Sbjct: 389 HSFCKNGMWDDTRALLEEMSAKGLTLNSQGYNGMIYALCKDGRMDEAMGLIQEMRSQGCN 448
Query: 339 PDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEI 398
PDICSY T++ N ME AE F L ++G V N ITY T+I + + + +
Sbjct: 449 PDICSYNTIIYHLCNNEQMEEAEHMFENLLEEGVVANGITYNTIIHALLRDGRWQDAVRL 508
Query: 399 YDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLS 454
+M ++G + + ++ A K+ + D ++V +EM G P+ + NIL+S
Sbjct: 509 AKEMILHGCSLDVVSYNGLIKAMCKDGNVDRSLVLLEEMAEKGIKPNNVSYNILIS 564
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 80/299 (26%), Positives = 146/299 (48%), Gaps = 8/299 (2%)
Query: 99 FLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQ 158
+ +L+ K G + A ++L M KKG+AP+VV++T ++ ++ + G + + A+ M
Sbjct: 349 YSILMHGLCKLGRISSAVRLLREMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMS 408
Query: 159 SSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSP-LKPDQKMFHMMIYMYKKA 217
+ G ++ Y ++ + + EA M L+ E +S PD ++ +IY
Sbjct: 409 AKGLTLNSQGYNGMIYALCKDGRMDEA----MGLIQEMRSQGCNPDICSYNTIIYHLCNN 464
Query: 218 GGYEKARKLFALMAERGVQQSTVTYNSLMSF---ETNYKEVSKIYDQMQRAGLQPDVVSY 274
E+A +F + E GV + +TYN+++ + +++ ++ +M G DVVSY
Sbjct: 465 EQMEEAEHMFENLLEEGVVANGITYNTIIHALLRDGRWQDAVRLAKEMILHGCSLDVVSY 524
Query: 275 ALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRR 334
LI A K + +L + EEM + G++P + +YNIL+ V A + K M
Sbjct: 525 NGLIKAMCKDGNVDRSLVLLEEMAEKGIKPNNVSYNILISELCKERRVRDALELSKQMLN 584
Query: 335 DRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLE 393
+PDI +Y T+++ M A +L + P++ITY LI + KV L+
Sbjct: 585 QGLAPDIVTYNTLINGLCKMGWMHAALNLLEKLHNENVHPDIITYNILISWHCKVRLLD 643
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 90/417 (21%), Positives = 184/417 (44%), Gaps = 25/417 (5%)
Query: 93 DFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEA 152
+ N + F +I +G +A ++ M KG P +++ LM + GR +A
Sbjct: 308 ELNVVLFNTVIGGCLAEGKLAEATELYETMGLKGCQPDAHTYSILMHGLCKLGRISSAVR 367
Query: 153 IFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSP-LKPDQKMFHMMI 211
+ R M+ G P+ +TY I+L F + + + LL+E + L + + ++ MI
Sbjct: 368 LLREMEKKGFAPNVVTYTIVLHSFCKNGMWDDTR----ALLEEMSAKGLTLNSQGYNGMI 423
Query: 212 YMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETN---YKEVSKIYDQMQRAGLQ 268
Y K G ++A L M +G +YN+++ N +E +++ + G+
Sbjct: 424 YALCKDGRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQMEEAEHMFENLLEEGVV 483
Query: 269 PDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTV 328
+ ++Y +I+A + R ++A+ + +EM+ G +YN L+ A G VD++ +
Sbjct: 484 ANGITYNTIIHALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMCKDGNVDRSLVL 543
Query: 329 FKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAK 388
+ M P+ SY ++S + A + +++ G P+++TY TLI G K
Sbjct: 544 LEEMAEKGIKPNNVSYNILISELCKERRVRDALELSKQMLNQGLAPDIVTYNTLINGLCK 603
Query: 389 VNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFP----- 443
+ + + + +K+ + P+ + ++ + K + D A + + P
Sbjct: 604 MGWMHAALNLLEKLHNENVHPDIITYNILISWHCKVRLLDDAAMLLNRAMAAVCPVGDRR 663
Query: 444 -----PDQKAKNILLSLAKTADERNEANELLGNF------NHPNNEPGINGLSISVD 489
PD+ K + L + + ANE N + ++ P + G+S+S+D
Sbjct: 664 IMQILPDKNFK-LYLHTKDSYLYCSRANECKANILLEQSTSFIDSAPKVGGVSLSID 719
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/255 (23%), Positives = 102/255 (40%), Gaps = 35/255 (13%)
Query: 234 GVQQSTVTYNSLMSFETN---YKEVSKIYDQM-QRAGLQPDVVSYALLINAYGKARREEE 289
GVQ S +YN ++S + + +Y +M R + P ++ + A + R E
Sbjct: 134 GVQPSFRSYNVVLSVLARADCHADALALYRRMVHRDRVPPTTFTFGVAARALCRLGRANE 193
Query: 290 ALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLS 349
ALA+ M G P Y ++ A G V +A T+ M C+ D+ ++ ++
Sbjct: 194 ALALLRGMARHGCVPDAVLYQTVIHALCDQGGVTEAATLLNEMLLMGCAADVNTFDDVVR 253
Query: 350 AYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKV-------------------- 389
+ A + R+ G +P V+TYG L++G +V
Sbjct: 254 GMCGLGRVREAARLVDRMMTKGCMPGVMTYGFLLQGLCRVRQADEARAMLGRVPELNVVL 313
Query: 390 -----------NNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEME 438
L + E+Y+ M + G +P+ ++ +M K SAV +EME
Sbjct: 314 FNTVIGGCLAEGKLAEATELYETMGLKGCQPDAHTYSILMHGLCKLGRISSAVRLLREME 373
Query: 439 SCGFPPDQKAKNILL 453
GF P+ I+L
Sbjct: 374 KKGFAPNVVTYTIVL 388
>gi|326491875|dbj|BAJ98162.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 628
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 101/376 (26%), Positives = 173/376 (46%), Gaps = 7/376 (1%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
LI+A+ K G + A +L+ M G P+ +T LM + A +F M+
Sbjct: 232 LISAFCKLGRQDSAIWLLNEMKDNGMQPTAKIYTMLMALLFKLDNVHGALGLFEEMRHQY 291
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
RP TY +++ +A + EA F + + +PD + + MI KAG +
Sbjct: 292 CRPDVFTYTELIRGLGKAGRLDEAYNFFHEM---RREGCRPDTVLMNNMINFLGKAGRLD 348
Query: 222 KARKLFALMAERGVQQSTVTYNSLMS--FETNYK--EVSKIYDQMQRAGLQPDVVSYALL 277
A KLF M S VTYN+++ FE+ + E+S +++M+ +G+ P +Y++L
Sbjct: 349 DAIKLFEEMETLRCIPSVVTYNTIIKALFESKSRVSEISSWFERMKGSGISPSPFTYSIL 408
Query: 278 INAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRC 337
I+ + K R E+A+ + EEM + G P AY L+DA + D A +F+ ++ +
Sbjct: 409 IDGFCKTNRTEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLANELFQELKENCG 468
Query: 338 SPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMME 397
S Y M+ A ++ A F + + G PNV Y L+ G A+ L++ +
Sbjct: 469 SSSARVYAVMIKHLGKAGRLDDAVDLFDEMNRLGCTPNVYAYNALMSGLARAGMLDEALT 528
Query: 398 IYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAK 457
+M+ +G P+ + I++A K D A+ M+ PD + N +L
Sbjct: 529 TMRRMQDHGCIPDINSYNIILNALAKTGGPDRAMGMLCNMKQSAIKPDAVSYNTVLGALS 588
Query: 458 TADERNEANELLGNFN 473
A EA +L+ N
Sbjct: 589 HAGMFEEAAKLMKEMN 604
Score = 135 bits (339), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 92/350 (26%), Positives = 166/350 (47%), Gaps = 8/350 (2%)
Query: 137 LMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEE 196
++ G A AIF ++++ +P+A Y ++ + + ++++ E++ + +E
Sbjct: 161 IIRMLGNAKMISKAVAIFYQIKARKCQPTAHAYNSMIIMLMHEGEYEKVHELYNEMSNEG 220
Query: 197 KSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVS 256
+ PD + +I + K G + A L M + G+Q + Y LM+ V
Sbjct: 221 QC--FPDTVTYSALISAFCKLGRQDSAIWLLNEMKDNGMQPTAKIYTMLMALLFKLDNVH 278
Query: 257 K---IYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILL 313
++++M+ +PDV +Y LI GKA R +EA F EM G RP N ++
Sbjct: 279 GALGLFEEMRHQYCRPDVFTYTELIRGLGKAGRLDEAYNFFHEMRREGCRPDTVLMNNMI 338
Query: 314 DAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSA-YVNASDMEGAEKFFRRLKQDGF 372
+ +G +D A +F+ M RC P + +Y T++ A + + S + +F R+K G
Sbjct: 339 NFLGKAGRLDDAIKLFEEMETLRCIPSVVTYNTIIKALFESKSRVSEISSWFERMKGSGI 398
Query: 373 VPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVV 432
P+ TY LI G+ K N EK M + ++M G P + +++DA GK K +D A
Sbjct: 399 SPSPFTYSILIDGFCKTNRTEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLANE 458
Query: 433 WYKEM-ESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGI 481
++E+ E+CG + ++ L K A ++A +L N P +
Sbjct: 459 LFQELKENCGSSSARVYAVMIKHLGK-AGRLDDAVDLFDEMNRLGCTPNV 507
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 93/384 (24%), Positives = 183/384 (47%), Gaps = 10/384 (2%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYA-PSVVSHTALMEAYGRGGRYKNAEAIFRRMQSS 160
+I +G++ K ++ + M+ +G P V+++AL+ A+ + GR +A + M+ +
Sbjct: 196 MIIMLMHEGEYEKVHELYNEMSNEGQCFPDTVTYSALISAFCKLGRQDSAIWLLNEMKDN 255
Query: 161 GPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGY 220
G +P+A Y +++ L + + A +F + + +PD + +I KAG
Sbjct: 256 GMQPTAKIYTMLMALLFKLDNVHGALGLFEEMRHQY---CRPDVFTYTELIRGLGKAGRL 312
Query: 221 EKARKLFALMAERGVQQSTVTYNSLMSF---ETNYKEVSKIYDQMQRAGLQPDVVSYALL 277
++A F M G + TV N++++F + K++++M+ P VV+Y +
Sbjct: 313 DEAYNFFHEMRREGCRPDTVLMNNMINFLGKAGRLDDAIKLFEEMETLRCIPSVVTYNTI 372
Query: 278 INAYGKAR-REEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDR 336
I A +++ R E + FE M +G+ P+ Y+IL+D F + ++A + + M
Sbjct: 373 IKALFESKSRVSEISSWFERMKGSGISPSPFTYSILIDGFCKTNRTEKAMMLLEEMDEKG 432
Query: 337 CSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMM 396
P +Y +++ A A + A + F+ LK++ + Y +IK K L+ +
Sbjct: 433 FPPCPAAYCSLIDALGKAKRYDLANELFQELKENCGSSSARVYAVMIKHLGKAGRLDDAV 492
Query: 397 EIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILL-SL 455
+++D+M G PN + +M + D A+ + M+ G PD + NI+L +L
Sbjct: 493 DLFDEMNRLGCTPNVYAYNALMSGLARAGMLDEALTTMRRMQDHGCIPDINSYNIILNAL 552
Query: 456 AKTADERNEANELLGNFNHPNNEP 479
AKT + A +L N +P
Sbjct: 553 AKTGGP-DRAMGMLCNMKQSAIKP 575
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/246 (21%), Positives = 115/246 (46%), Gaps = 37/246 (15%)
Query: 79 VSEVLEWL-RIQ-SWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTA 136
VSE+ W R++ S + + +LI + K KA +L M++KG+ P ++ +
Sbjct: 383 VSEISSWFERMKGSGISPSPFTYSILIDGFCKTNRTEKAMMLLEEMDEKGFPPCPAAYCS 442
Query: 137 LMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVF------- 189
L++A G+ RY A +F+ ++ + SA Y +++K +A + +A ++F
Sbjct: 443 LIDALGKAKRYDLANELFQELKENCGSSSARVYAVMIKHLGKAGRLDDAVDLFDEMNRLG 502
Query: 190 -----------------MTLLDEEKSPLK--------PDQKMFHMMIYMYKKAGGYEKAR 224
+LDE + ++ PD +++++ K GG ++A
Sbjct: 503 CTPNVYAYNALMSGLARAGMLDEALTTMRRMQDHGCIPDINSYNIILNALAKTGGPDRAM 562
Query: 225 KLFALMAERGVQQSTVTYNSLM---SFETNYKEVSKIYDQMQRAGLQPDVVSYALLINAY 281
+ M + ++ V+YN+++ S ++E +K+ +M G D+++Y+ ++ A
Sbjct: 563 GMLCNMKQSAIKPDAVSYNTVLGALSHAGMFEEAAKLMKEMNAIGFDYDLITYSSILEAI 622
Query: 282 GKARRE 287
GK +E
Sbjct: 623 GKVDQE 628
>gi|147789724|emb|CAN67401.1| hypothetical protein VITISV_025967 [Vitis vinifera]
Length = 592
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 105/427 (24%), Positives = 178/427 (41%), Gaps = 40/427 (9%)
Query: 92 WDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVV------------------- 132
+DF E + L+ K G FN++ L + KGY P V+
Sbjct: 74 YDFRETHLMKLLNRSCKAGKFNESLYFLECLVNKGYTPDVILCTKLIKGFFNFKNIEKAS 133
Query: 133 -------SHT--------ALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFV 177
SHT A++ + + + + A + RM++ G P +TY I++
Sbjct: 134 RVMEILESHTEPDVFAYNAVISGFCKVNQIEAATQVLNRMKARGFLPDIVTYNIMIGSLC 193
Query: 178 EANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQ 237
K A V LL + P + ++I GG +A KL M RG+
Sbjct: 194 NRRKLGLALTVLDQLLLDN---CMPTVITYTILIEATIVEGGINEAMKLLEEMLARGLLP 250
Query: 238 STVTYNSL---MSFETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVF 294
TYN++ M E + +++ + G +PDV+SY +L+ A+ + +E +
Sbjct: 251 DMYTYNAIIRGMCKEGMVERAAELITSLTSKGCEPDVISYNILLRAFLNQGKWDEGEKLV 310
Query: 295 EEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNA 354
EM G P Y+IL+ + G +D+A +V K M +PD SY ++SA
Sbjct: 311 AEMFSRGCEPNKVTYSILISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKE 370
Query: 355 SDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIF 414
++ A + +G +P+++ Y T++ K N + +EI++K+R G PN + +
Sbjct: 371 GRLDLAIGIMDYMISNGCLPDIVNYNTILAALCKNGNANQALEIFNKLRGMGCPPNVSSY 430
Query: 415 TTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNH 474
T++ A D A+ M S G PD+ N L+S EA LL +
Sbjct: 431 NTMISALWSCGDRSRALGMVPAMISKGIDPDEITYNSLISCLCRDGLVEEAIGLLDDMEQ 490
Query: 475 PNNEPGI 481
P +
Sbjct: 491 SGFRPTV 497
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 100/408 (24%), Positives = 193/408 (47%), Gaps = 19/408 (4%)
Query: 61 DLVLGT-----LVRLKQLKKWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKA 115
D++L T K ++K + V E+LE + +N +I+ + K A
Sbjct: 112 DVILCTKLIKGFFNFKNIEKASRVMEILESHTEPDVFAYNA-----VISGFCKVNQIEAA 166
Query: 116 EKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKL 175
+VL+ M +G+ P +V++ ++ + + A + ++ P+ +TY I+++
Sbjct: 167 TQVLNRMKARGFLPDIVTYNIMIGSLCNRRKLGLALTVLDQLLLDNCMPTVITYTILIEA 226
Query: 176 FVEANKFKEAEEVFMTLLDEEKS-PLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERG 234
+ EA M LL+E + L PD ++ +I K G E+A +L + +G
Sbjct: 227 TIVEGGINEA----MKLLEEMLARGLLPDMYTYNAIIRGMCKEGMVERAAELITSLTSKG 282
Query: 235 VQQSTVTYNSLMSFETN---YKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEAL 291
+ ++YN L+ N + E K+ +M G +P+ V+Y++LI++ + R +EA+
Sbjct: 283 CEPDVISYNILLRAFLNQGKWDEGEKLVAEMFSRGCEPNKVTYSILISSLCRFGRIDEAI 342
Query: 292 AVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAY 351
+V + M++ + P +Y+ L+ A G +D A + M + C PDI +Y T+L+A
Sbjct: 343 SVLKVMIEKELTPDTYSYDPLISALCKEGRLDLAIGIMDYMISNGCLPDIVNYNTILAAL 402
Query: 352 VNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQ 411
+ A + F +L+ G PNV +Y T+I + + + + M GI P++
Sbjct: 403 CKNGNANQALEIFNKLRGMGCPPNVSSYNTMISALWSCGDRSRALGMVPAMISKGIDPDE 462
Query: 412 TIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNI-LLSLAKT 458
+ +++ ++ + A+ +ME GF P + NI LL L K
Sbjct: 463 ITYNSLISCLCRDGLVEEAIGLLDDMEQSGFRPTVISYNIVLLGLCKV 510
Score = 132 bits (333), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 92/343 (26%), Positives = 157/343 (45%), Gaps = 6/343 (1%)
Query: 129 PSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEV 188
P+V+++T L+EA G A + M + G P TY I++ + + A E+
Sbjct: 215 PTVITYTILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNAIIRGMCKEGMVERAAEL 274
Query: 189 FMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSF 248
+L + +PD +++++ + G +++ KL A M RG + + VTY+ L+S
Sbjct: 275 ITSLTSKG---CEPDVISYNILLRAFLNQGKWDEGEKLVAEMFSRGCEPNKVTYSILISS 331
Query: 249 ETNYK---EVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPT 305
+ E + M L PD SY LI+A K R + A+ + + M+ G P
Sbjct: 332 LCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGRLDLAIGIMDYMISNGCLPD 391
Query: 306 HKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFR 365
YN +L A +G +QA +F +R C P++ SY TM+SA + D A
Sbjct: 392 IVNYNTILAALCKNGNANQALEIFNKLRGMGCPPNVSSYNTMISALWSCGDRSRALGMVP 451
Query: 366 RLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNK 425
+ G P+ ITY +LI + +E+ + + D M +G +P + ++ K +
Sbjct: 452 AMISKGIDPDEITYNSLISCLCRDGLVEEAIGLLDDMEQSGFRPTVISYNIVLLGLCKVR 511
Query: 426 DFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANEL 468
D A+ + EM G P++ +L+ A R EA EL
Sbjct: 512 RIDDAIGMFAEMIEKGCRPNETTYILLIEGIGFAGWRTEAMEL 554
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 71/287 (24%), Positives = 129/287 (44%), Gaps = 6/287 (2%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
+I K+G +A ++++ + KG P V+S+ L+ A+ G++ E + M S G
Sbjct: 258 IIRGMCKEGMVERAAELITSLTSKGCEPDVISYNILLRAFLNQGKWDEGEKLVAEMFSRG 317
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
P+ +TY I++ + EA V ++++E L PD + +I K G +
Sbjct: 318 CEPNKVTYSILISSLCRFGRIDEAISVLKVMIEKE---LTPDTYSYDPLISALCKEGRLD 374
Query: 222 KARKLFALMAERGVQQSTVTYNSLMSFET---NYKEVSKIYDQMQRAGLQPDVVSYALLI 278
A + M G V YN++++ N + +I+++++ G P+V SY +I
Sbjct: 375 LAIGIMDYMISNGCLPDIVNYNTILAALCKNGNANQALEIFNKLRGMGCPPNVSSYNTMI 434
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCS 338
+A AL + M+ G+ P YN L+ G+V++A + M +
Sbjct: 435 SALWSCGDRSRALGMVPAMISKGIDPDEITYNSLISCLCRDGLVEEAIGLLDDMEQSGFR 494
Query: 339 PDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKG 385
P + SY +L ++ A F + + G PN TY LI+G
Sbjct: 495 PTVISYNIVLLGLCKVRRIDDAIGMFAEMIEKGCRPNETTYILLIEG 541
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/235 (23%), Positives = 91/235 (38%), Gaps = 41/235 (17%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N++ + +LI++ + G ++A VL M +K P S+ L+ A + GR A I
Sbjct: 321 NKVTYSILISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGRLDLAIGIM 380
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
M S+G P + Y IL + +A E+F L P+ ++ MI
Sbjct: 381 DYMISNGCLPDIVNYNTILAALCKNGNANQALEIFNKL---RGMGCPPNVSSYNTMISAL 437
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETN---YKEVSKIYDQMQRAGLQPDV 271
G +A + M +G+ +TYNSL+S +E + D M+++G +P V
Sbjct: 438 WSCGDRSRALGMVPAMISKGIDPDEITYNSLISCLCRDGLVEEAIGLLDDMEQSGFRPTV 497
Query: 272 VS-----------------------------------YALLINAYGKARREEEAL 291
+S Y LLI G A EA+
Sbjct: 498 ISYNIVLLGLCKVRRIDDAIGMFAEMIEKGCRPNETTYILLIEGIGFAGWRTEAM 552
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 74/157 (47%), Gaps = 5/157 (3%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
+I+A GD ++A ++ M KG P +++ +L+ R G + A + M+ SG
Sbjct: 433 MISALWSCGDRSRALGMVPAMISKGIDPDEITYNSLISCLCRDGLVEEAIGLLDDMEQSG 492
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
RP+ ++Y I+L + + +A +F ++++ +P++ + ++I AG
Sbjct: 493 FRPTVISYNIVLLGLCKVRRIDDAIGMFAEMIEKG---CRPNETTYILLIEGIGFAGWRT 549
Query: 222 KARKLFALMAERGV--QQSTVTYNSLMSFETNYKEVS 256
+A +L + R V Q S N YKE+S
Sbjct: 550 EAMELANSLFSRDVISQDSFKRLNKTFPMLDVYKELS 586
Score = 40.8 bits (94), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 27/109 (24%), Positives = 52/109 (47%)
Query: 88 IQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRY 147
I D +E+ + LI+ + G +A +L M + G+ P+V+S+ ++ + R
Sbjct: 454 ISKGIDPDEITYNSLISCLCRDGLVEEAIGLLDDMEQSGFRPTVISYNIVLLGLCKVRRI 513
Query: 148 KNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEE 196
+A +F M G RP+ TY ++++ A EA E+ +L +
Sbjct: 514 DDAIGMFAEMIEKGCRPNETTYILLIEGIGFAGWRTEAMELANSLFSRD 562
>gi|15225722|ref|NP_180822.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75160493|sp|Q8S8P6.1|PP180_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g32630
gi|20197234|gb|AAM14987.1| putative salt-inducible protein [Arabidopsis thaliana]
gi|330253613|gb|AEC08707.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 624
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 95/355 (26%), Positives = 163/355 (45%), Gaps = 6/355 (1%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
+I AY KQ DF+ E VL M K G + V++T LME + G+ +AE +F M+ G
Sbjct: 265 IINAYVKQRDFSGVEGVLKVMKKDGVVYNKVTYTLLMELSVKNGKMSDAEKLFDEMRERG 324
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
Y ++ K A F+ + + L P + +I K G
Sbjct: 325 IESDVHVYTSLISWNCRKGNMKRA---FLLFDELTEKGLSPSSYTYGALIDGVCKVGEMG 381
Query: 222 KARKLFALMAERGVQQSTVTYNSLM---SFETNYKEVSKIYDQMQRAGLQPDVVSYALLI 278
A L M +GV + V +N+L+ + E S IYD M++ G Q DV + +
Sbjct: 382 AAEILMNEMQSKGVNITQVVFNTLIDGYCRKGMVDEASMIYDVMEQKGFQADVFTCNTIA 441
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCS 338
+ + + +R +EA M++ GV+ + +Y L+D + G V++A+ +F M
Sbjct: 442 SCFNRLKRYDEAKQWLFRMMEGGVKLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKGVQ 501
Query: 339 PDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEI 398
P+ +Y M+ AY ++ A K ++ +G P+ TY +LI G +N+++ M +
Sbjct: 502 PNAITYNVMIYAYCKQGKIKEARKLRANMEANGMDPDSYTYTSLIHGECIADNVDEAMRL 561
Query: 399 YDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILL 453
+ +M + G+ N +T ++ K D A Y EM+ G+ D K L+
Sbjct: 562 FSEMGLKGLDQNSVTYTVMISGLSKAGKSDEAFGLYDEMKRKGYTIDNKVYTALI 616
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 97/400 (24%), Positives = 175/400 (43%), Gaps = 13/400 (3%)
Query: 88 IQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRY 147
++ +E ++ + A K+ + ++ M G +V S T ++E R G
Sbjct: 181 VKKGLSIDERSCIVFLVAAKKRRRIDLCLEIFRRMVDSGVKITVYSLTIVVEGLCRRGEV 240
Query: 148 KNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMF 207
+ ++ + + G +P A TY I+ +V+ F E V + +K + ++ +
Sbjct: 241 EKSKKLIKEFSVKGIKPEAYTYNTIINAYVKQRDFSGVEGVLKVM---KKDGVVYNKVTY 297
Query: 208 HMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFET---NYKEVSKIYDQMQR 264
+++ + K G A KLF M ERG++ Y SL+S+ N K ++D++
Sbjct: 298 TLLMELSVKNGKMSDAEKLFDEMRERGIESDVHVYTSLISWNCRKGNMKRAFLLFDELTE 357
Query: 265 AGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQ 324
GL P +Y LI+ K A + EM GV T +N L+D + GMVD+
Sbjct: 358 KGLSPSSYTYGALIDGVCKVGEMGAAEILMNEMQSKGVNITQVVFNTLIDGYCRKGMVDE 417
Query: 325 ARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIK 384
A ++ M + D+ + T+ S + + A+++ R+ + G + ++Y LI
Sbjct: 418 ASMIYDVMEQKGFQADVFTCNTIASCFNRLKRYDEAKQWLFRMMEGGVKLSTVSYTNLID 477
Query: 385 GYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPP 444
Y K N+E+ ++ +M G++PN + ++ AY K A ME+ G P
Sbjct: 478 VYCKEGNVEEAKRLFVEMSSKGVQPNAITYNVMIYAYCKQGKIKEARKLRANMEANGMDP 537
Query: 445 DQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGINGL 484
D L+ AD +EA L +E G+ GL
Sbjct: 538 DSYTYTSLIHGECIADNVDEAMRLF-------SEMGLKGL 570
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 65/252 (25%), Positives = 118/252 (46%), Gaps = 6/252 (2%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
LI K G+ AE +++ M KG + V L++ Y R G A I+ M+ G
Sbjct: 370 LIDGVCKVGEMGAAEILMNEMQSKGVNITQVVFNTLIDGYCRKGMVDEASMIYDVMEQKG 429
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
+ T I F ++ EA++ +++ +K + +I +Y K G E
Sbjct: 430 FQADVFTCNTIASCFNRLKRYDEAKQWLFRMME---GGVKLSTVSYTNLIDVYCKEGNVE 486
Query: 222 KARKLFALMAERGVQQSTVTYNSLM---SFETNYKEVSKIYDQMQRAGLQPDVVSYALLI 278
+A++LF M+ +GVQ + +TYN ++ + KE K+ M+ G+ PD +Y LI
Sbjct: 487 EAKRLFVEMSSKGVQPNAITYNVMIYAYCKQGKIKEARKLRANMEANGMDPDSYTYTSLI 546
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCS 338
+ A +EA+ +F EM G+ Y +++ + +G D+A ++ M+R +
Sbjct: 547 HGECIADNVDEAMRLFSEMGLKGLDQNSVTYTVMISGLSKAGKSDEAFGLYDEMKRKGYT 606
Query: 339 PDICSYTTMLSA 350
D YT ++ +
Sbjct: 607 IDNKVYTALIGS 618
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 102/202 (50%)
Query: 252 YKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNI 311
++E +++D M + GL D S + + A K RR + L +F M+D+GV+ T + I
Sbjct: 170 FEEGLRVFDYMVKKGLSIDERSCIVFLVAAKKRRRIDLCLEIFRRMVDSGVKITVYSLTI 229
Query: 312 LLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDG 371
+++ G V++++ + K P+ +Y T+++AYV D G E + +K+DG
Sbjct: 230 VVEGLCRRGEVEKSKKLIKEFSVKGIKPEAYTYNTIINAYVKQRDFSGVEGVLKVMKKDG 289
Query: 372 FVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAV 431
V N +TY L++ K + +++D+MR GI+ + ++T+++ + + A
Sbjct: 290 VVYNKVTYTLLMELSVKNGKMSDAEKLFDEMRERGIESDVHVYTSLISWNCRKGNMKRAF 349
Query: 432 VWYKEMESCGFPPDQKAKNILL 453
+ + E+ G P L+
Sbjct: 350 LLFDELTEKGLSPSSYTYGALI 371
>gi|414879860|tpg|DAA56991.1| TPA: hypothetical protein ZEAMMB73_837882 [Zea mays]
Length = 677
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 101/394 (25%), Positives = 190/394 (48%), Gaps = 24/394 (6%)
Query: 103 ITAYGKQGDFNKAEKVLSF-MNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
+ AY K A+++L M G AP +++ ++ A R GR+ A ++F M++
Sbjct: 254 VAAYCKSDLLRDAKRMLLHDMPADGVAPDAETYSPILAALARRGRHLAAVSLFSHMRAVA 313
Query: 162 -PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGY 220
+P + IIL + + + +EA+ +F ++ ++ + P ++ M+ +Y AG +
Sbjct: 314 RVKPDISVFNIILNAYGQLDLAREADRLFWSM---RRAGVPPSVVTYNTMLRVYGDAGLF 370
Query: 221 EKARKLFALM---------AERGVQQSTVTYNSLMSFETNYKE---VSKIYDQMQRAGLQ 268
+A LF LM A V+ + VTYN++++ E ++ +MQ G+Q
Sbjct: 371 GEAVHLFDLMRSTSDGNGGAGSSVKPNVVTYNTMITIYGKSLEDEKAGRLVQEMQAIGVQ 430
Query: 269 PDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTV 328
PD ++Y+ +++ + KA + + A +FE++ +AG Y ++ A+ +G+V QA+ +
Sbjct: 431 PDAITYSTILSIWVKAGKLDRAARLFEKLREAGTEIDPVLYQTMVVAYERAGLVSQAKRL 490
Query: 329 FKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAK 388
RD P+ T + +A +E A FRR G + + + ++ YAK
Sbjct: 491 L----RDLKDPEGIPKETAIKILASAGRLEEAAWLFRRAVNTGEIKDSSVHRAMMDLYAK 546
Query: 389 VNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKA 448
++E++D+MR G P+ I T M+AYGK K+FD A Y+ M G +
Sbjct: 547 NRRHRNVIEVFDEMRKLGQLPDSEIIATAMNAYGKLKEFDKAAALYQAMREAGCVFSDRV 606
Query: 449 KNILLSLAKTADERNEANELLGNFNHPNNEPGIN 482
++SL + L+G +H +P I+
Sbjct: 607 HFQMISLLGAQKDFKALEVLVGELSH---DPSID 637
Score = 118 bits (295), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 89/370 (24%), Positives = 165/370 (44%), Gaps = 17/370 (4%)
Query: 131 VVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFM 190
++ + L+ + R G + A + M+ G P A +Y +L A A F+
Sbjct: 142 LIPYNLLLRSACRAGELRLASGLLLEMRERGVTPDAFSYSTLLAALTRAGHLDHAL-TFL 200
Query: 191 TLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMS--F 248
L++++ + PD +F +I++ + G KA LF+ + G++ YN+ ++
Sbjct: 201 PLMEDDA--VAPDLILFSNLIHLALRGGDAPKALALFSRLRAAGIRPDLKAYNAAVAAYC 258
Query: 249 ETNYKEVSK--IYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLD-AGVRPT 305
+++ +K + M G+ PD +Y+ ++ A + R A+++F M A V+P
Sbjct: 259 KSDLLRDAKRMLLHDMPADGVAPDAETYSPILAALARRGRHLAAVSLFSHMRAVARVKPD 318
Query: 306 HKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFF- 364
+NI+L+A+ + +A +F MRR P + +Y TML Y +A A F
Sbjct: 319 ISVFNIILNAYGQLDLAREADRLFWSMRRAGVPPSVVTYNTMLRVYGDAGLFGEAVHLFD 378
Query: 365 -RRLKQDG-------FVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTT 416
R DG PNV+TY T+I Y K EK + +M+ G++P+ ++T
Sbjct: 379 LMRSTSDGNGGAGSSVKPNVVTYNTMITIYGKSLEDEKAGRLVQEMQAIGVQPDAITYST 438
Query: 417 IMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPN 476
I+ + K D A ++++ G D ++ + A ++A LL + P
Sbjct: 439 ILSIWVKAGKLDRAARLFEKLREAGTEIDPVLYQTMVVAYERAGLVSQAKRLLRDLKDPE 498
Query: 477 NEPGINGLSI 486
P + I
Sbjct: 499 GIPKETAIKI 508
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 67/312 (21%), Positives = 131/312 (41%), Gaps = 15/312 (4%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNK---------KGYAPSVVSHTALMEAYGRGGRYKNAEA 152
++ YG G F +A + M P+VV++ ++ YG+ + A
Sbjct: 360 MLRVYGDAGLFGEAVHLFDLMRSTSDGNGGAGSSVKPNVVTYNTMITIYGKSLEDEKAGR 419
Query: 153 IFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIY 212
+ + MQ+ G +P A+TY IL ++V+A K A +F L ++ + D ++ M+
Sbjct: 420 LVQEMQAIGVQPDAITYSTILSIWVKAGKLDRAARLFEKL---REAGTEIDPVLYQTMVV 476
Query: 213 MYKKAGGYEKARKLFA-LMAERGVQQSTVTYNSLMSFETNYKEVSKIYDQMQRAGLQPDV 271
Y++AG +A++L L G+ + T +++ +E + ++ + G D
Sbjct: 477 AYERAGLVSQAKRLLRDLKDPEGIPKETAI--KILASAGRLEEAAWLFRRAVNTGEIKDS 534
Query: 272 VSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKC 331
+ +++ Y K RR + VF+EM G P + ++A+ D+A +++
Sbjct: 535 SVHRAMMDLYAKNRRHRNVIEVFDEMRKLGQLPDSEIIATAMNAYGKLKEFDKAAALYQA 594
Query: 332 MRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNN 391
MR C + M+S D + E L D + Y Y +
Sbjct: 595 MREAGCVFSDRVHFQMISLLGAQKDFKALEVLVGELSHDPSIDKRELYLVAAGVYERAYK 654
Query: 392 LEKMMEIYDKMR 403
+K +I ++R
Sbjct: 655 FDKASQIISQIR 666
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 49/210 (23%), Positives = 101/210 (48%), Gaps = 10/210 (4%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + + +IT YGK + KA +++ M G P ++++ ++ + + G+ A +F
Sbjct: 397 NVVTYNTMITIYGKSLEDEKAGRLVQEMQAIGVQPDAITYSTILSIWVKAGKLDRAARLF 456
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
+++ +G + YQ ++ + A +A+ + L D E P + K+
Sbjct: 457 EKLREAGTEIDPVLYQTMVVAYERAGLVSQAKRLLRDLKDPEGIPKETAIKIL------- 509
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSLMSF---ETNYKEVSKIYDQMQRAGLQPDV 271
AG E+A LF G + + + ++M ++ V +++D+M++ G PD
Sbjct: 510 ASAGRLEEAAWLFRRAVNTGEIKDSSVHRAMMDLYAKNRRHRNVIEVFDEMRKLGQLPDS 569
Query: 272 VSYALLINAYGKARREEEALAVFEEMLDAG 301
A +NAYGK + ++A A+++ M +AG
Sbjct: 570 EIIATAMNAYGKLKEFDKAAALYQAMREAG 599
>gi|357115764|ref|XP_003559656.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
distachyon]
Length = 867
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 88/368 (23%), Positives = 177/368 (48%), Gaps = 12/368 (3%)
Query: 74 KKWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVS 133
K N+ +E+++ + + +N ++ A K +KAE VL M P V+
Sbjct: 290 KACNLFNEMVQKGVVPNVVTYNS-----IVHALCKARAMDKAELVLRQMFDNSIQPDEVT 344
Query: 134 HTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLL 193
+TA++ Y GR+K A +F+ M G P +T+ ++ + + KEA E+F ++
Sbjct: 345 YTAMIHGYSCLGRWKEAAKMFKEMTREGLIPDIVTFNSLMDSLCKHKRSKEAAEIFHSIA 404
Query: 194 DEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETN-- 251
+ KPD + ++++ Y G + LF M + G+ + +N L++
Sbjct: 405 TKGH---KPDIISYSILLHGYATEGRFVDMNNLFHSMTDNGIVADSHCFNILINAHAKRG 461
Query: 252 -YKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYN 310
E I+ +M+ G+ P+VV+YA +I A + R +A+ +M+ G++P Y+
Sbjct: 462 MMDEALLIFTEMRGQGVSPNVVTYATVIAALCRMGRLADAMEKLSQMISIGLKPNTVVYH 521
Query: 311 ILLDAFAISG-MVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQ 369
L+ F G ++ V + M + P+I +++++ + N + A+ F +
Sbjct: 522 SLIQGFCTHGDLIKAKELVSEMMDQGIPRPNITFFSSIIHSLCNEGRVMNAQDVFNLVIH 581
Query: 370 DGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDS 429
G P++ T+ +LI GY V ++K + D M G +P+ ++T+++ Y K+ D
Sbjct: 582 IGDRPDIFTFNSLIDGYCLVGKMDKAFGVLDAMVSAGTEPDVVTYSTLINGYFKSGRIDD 641
Query: 430 AVVWYKEM 437
++ ++EM
Sbjct: 642 GLILFREM 649
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 93/358 (25%), Positives = 169/358 (47%), Gaps = 11/358 (3%)
Query: 99 FLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQ 158
F +LI A+ K+G ++A + + M +G +P+VV++ ++ A R GR +A +M
Sbjct: 450 FNILINAHAKRGMMDEALLIFTEMRGQGVSPNVVTYATVIAALCRMGRLADAMEKLSQMI 509
Query: 159 SSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAG 218
S G +P+ + Y +++ F +A+E+ ++D+ +P+ F +I+ G
Sbjct: 510 SIGLKPNTVVYHSLIQGFCTHGDLIKAKELVSEMMDQGIP--RPNITFFSSIIHSLCNEG 567
Query: 219 GYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSK------IYDQMQRAGLQPDVV 272
A+ +F L+ G + T+NSL+ Y V K + D M AG +PDVV
Sbjct: 568 RVMNAQDVFNLVIHIGDRPDIFTFNSLID---GYCLVGKMDKAFGVLDAMVSAGTEPDVV 624
Query: 273 SYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCM 332
+Y+ LIN Y K+ R ++ L +F EML V+PT Y+++LD +G A+ +F M
Sbjct: 625 TYSTLINGYFKSGRIDDGLILFREMLCKRVKPTTVTYSLVLDGLFRAGRTSAAKKMFHEM 684
Query: 333 RRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNL 392
+ I +YT +L + + A F +L + T+I KV
Sbjct: 685 IESGTAMSISTYTIILQGLCRNNCTDEAITLFHKLGAMNLKFEIAILNTMIHALYKVKRR 744
Query: 393 EKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKN 450
E+ +++ + +G+ PN + + ++ K + A + + ME G P + N
Sbjct: 745 EEAHDLFASVSASGLVPNASTYGVMIINLLKEGSVEEADIMFSSMEKTGCAPSSRLLN 802
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 86/321 (26%), Positives = 144/321 (44%), Gaps = 41/321 (12%)
Query: 126 GYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEA 185
G +P VVS+T ++ G A +F M G P+ +TY I+ +A +A
Sbjct: 267 GCSPDVVSYTMVIHGLFMEGEISKACNLFNEMVQKGVVPNVVTYNSIVHALCKARAMDKA 326
Query: 186 EEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSL 245
E V + D ++PD+ + MI+ Y G +++A K+F M G+ VT+NSL
Sbjct: 327 ELVLRQMFDNS---IQPDEVTYTAMIHGYSCLGRWKEAAKMFKEMTREGLIPDIVTFNSL 383
Query: 246 MSFETNYK---EVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGV 302
M +K E ++I+ + G +PD++SY++L++ Y R + +F M D G+
Sbjct: 384 MDSLCKHKRSKEAAEIFHSIATKGHKPDIISYSILLHGYATEGRFVDMNNLFHSMTDNGI 443
Query: 303 RPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEK 362
+NIL++A A GM+D+A +F ++M G
Sbjct: 444 VADSHCFNILINAHAKRGMMDEALLIF-------------------------TEMRG--- 475
Query: 363 FFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYG 422
G PNV+TY T+I ++ L ME +M G+KPN ++ +++ +
Sbjct: 476 -------QGVSPNVVTYATVIAALCRMGRLADAMEKLSQMISIGLKPNTVVYHSLIQGFC 528
Query: 423 KNKDFDSAVVWYKEMESCGFP 443
+ D A EM G P
Sbjct: 529 THGDLIKAKELVSEMMDQGIP 549
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 86/363 (23%), Positives = 169/363 (46%), Gaps = 7/363 (1%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
+E+ + +I Y G + +A K+ M ++G P +V+ +LM++ + R K A IF
Sbjct: 341 DEVTYTAMIHGYSCLGRWKEAAKMFKEMTREGLIPDIVTFNSLMDSLCKHKRSKEAAEIF 400
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
+ + G +P ++Y I+L + +F + +F ++ D + + D F+++I +
Sbjct: 401 HSIATKGHKPDIISYSILLHGYATEGRFVDMNNLFHSMTD---NGIVADSHCFNILINAH 457
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSKIYD---QMQRAGLQPDV 271
K G ++A +F M +GV + VTY ++++ ++ + QM GL+P+
Sbjct: 458 AKRGMMDEALLIFTEMRGQGVSPNVVTYATVIAALCRMGRLADAMEKLSQMISIGLKPNT 517
Query: 272 VSYALLINAYGKARREEEALAVFEEMLDAGV-RPTHKAYNILLDAFAISGMVDQARTVFK 330
V Y LI + +A + EM+D G+ RP ++ ++ + G V A+ VF
Sbjct: 518 VVYHSLIQGFCTHGDLIKAKELVSEMMDQGIPRPNITFFSSIIHSLCNEGRVMNAQDVFN 577
Query: 331 CMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVN 390
+ PDI ++ +++ Y M+ A + G P+V+TY TLI GY K
Sbjct: 578 LVIHIGDRPDIFTFNSLIDGYCLVGKMDKAFGVLDAMVSAGTEPDVVTYSTLINGYFKSG 637
Query: 391 NLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKN 450
++ + ++ +M +KP ++ ++D + +A + EM G
Sbjct: 638 RIDDGLILFREMLCKRVKPTTVTYSLVLDGLFRAGRTSAAKKMFHEMIESGTAMSISTYT 697
Query: 451 ILL 453
I+L
Sbjct: 698 IIL 700
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 81/320 (25%), Positives = 144/320 (45%), Gaps = 5/320 (1%)
Query: 153 IFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIY 212
+ RM G P A +Y ++K ++ +EA ++ + + + PD + M+I+
Sbjct: 223 LLHRMSELGCVPDAFSYNTVIKSLCGGSRSQEALDMLLRMTKGDGC--SPDVVSYTMVIH 280
Query: 213 MYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSK---IYDQMQRAGLQP 269
G KA LF M ++GV + VTYNS++ + + K + QM +QP
Sbjct: 281 GLFMEGEISKACNLFNEMVQKGVVPNVVTYNSIVHALCKARAMDKAELVLRQMFDNSIQP 340
Query: 270 DVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVF 329
D V+Y +I+ Y R +EA +F+EM G+ P +N L+D+ +A +F
Sbjct: 341 DEVTYTAMIHGYSCLGRWKEAAKMFKEMTREGLIPDIVTFNSLMDSLCKHKRSKEAAEIF 400
Query: 330 KCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKV 389
+ PDI SY+ +L Y F + +G V + + LI +AK
Sbjct: 401 HSIATKGHKPDIISYSILLHGYATEGRFVDMNNLFHSMTDNGIVADSHCFNILINAHAKR 460
Query: 390 NNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAK 449
+++ + I+ +MR G+ PN + T++ A + A+ +M S G P+
Sbjct: 461 GMMDEALLIFTEMRGQGVSPNVVTYATVIAALCRMGRLADAMEKLSQMISIGLKPNTVVY 520
Query: 450 NILLSLAKTADERNEANELL 469
+ L+ T + +A EL+
Sbjct: 521 HSLIQGFCTHGDLIKAKELV 540
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 81/356 (22%), Positives = 157/356 (44%), Gaps = 10/356 (2%)
Query: 130 SVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVF 189
+V ++ LM+ R R A F R+ +G R + LK A + EA +
Sbjct: 164 TVHTYGILMDCCCRARRPDLGPAFFARLLRAGLRTDGIVTNTFLKCLCYAKRTDEALSML 223
Query: 190 MTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAER-GVQQSTVTYNSLMSF 248
+ + E PD ++ +I ++A + M + G V+Y ++
Sbjct: 224 LHRMSELGC--VPDAFSYNTVIKSLCGGSRSQEALDMLLRMTKGDGCSPDVVSYTMVIHG 281
Query: 249 ETNYKEVSK---IYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPT 305
E+SK ++++M + G+ P+VV+Y +++A KAR ++A V +M D ++P
Sbjct: 282 LFMEGEISKACNLFNEMVQKGVVPNVVTYNSIVHALCKARAMDKAELVLRQMFDNSIQPD 341
Query: 306 HKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFR 365
Y ++ ++ G +A +FK M R+ PDI ++ +++ + + A + F
Sbjct: 342 EVTYTAMIHGYSCLGRWKEAAKMFKEMTREGLIPDIVTFNSLMDSLCKHKRSKEAAEIFH 401
Query: 366 RLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNK 425
+ G P++I+Y L+ GYA M ++ M NGI + F +++A+ K
Sbjct: 402 SIATKGHKPDIISYSILLHGYATEGRFVDMNNLFHSMTDNGIVADSHCFNILINAHAKRG 461
Query: 426 DFDSAVVWYKEMESCGFPPD----QKAKNILLSLAKTADERNEANELLGNFNHPNN 477
D A++ + EM G P+ L + + AD + ++++ PN
Sbjct: 462 MMDEALLIFTEMRGQGVSPNVVTYATVIAALCRMGRLADAMEKLSQMISIGLKPNT 517
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 63/263 (23%), Positives = 117/263 (44%), Gaps = 4/263 (1%)
Query: 259 YDQMQRAGLQPDVVSYALLINAYGKARREEEALA-VFEEMLDAGVRPTHKAYNILLDAFA 317
+ ++ RAGL+ D + + A+R +EAL+ + M + G P +YN ++ +
Sbjct: 188 FARLLRAGLRTDGIVTNTFLKCLCYAKRTDEALSMLLHRMSELGCVPDAFSYNTVIKSLC 247
Query: 318 ISGMVDQAR-TVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNV 376
+A + + + D CSPD+ SYT ++ ++ A F + Q G VPNV
Sbjct: 248 GGSRSQEALDMLLRMTKGDGCSPDVVSYTMVIHGLFMEGEISKACNLFNEMVQKGVVPNV 307
Query: 377 ITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKE 436
+TY +++ K ++K + +M N I+P++ +T ++ Y + A +KE
Sbjct: 308 VTYNSIVHALCKARAMDKAELVLRQMFDNSIQPDEVTYTAMIHGYSCLGRWKEAAKMFKE 367
Query: 437 MESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGINGLSISVDEEDDDDD 496
M G PD N L+ EA E+ + ++P I +S S+ +
Sbjct: 368 MTREGLIPDIVTFNSLMDSLCKHKRSKEAAEIFHSIATKGHKPDI--ISYSILLHGYATE 425
Query: 497 DDEDDDDNIYHDGDGDGDGDDNE 519
D +N++H +G D+
Sbjct: 426 GRFVDMNNLFHSMTDNGIVADSH 448
>gi|357477483|ref|XP_003609027.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355510082|gb|AES91224.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 583
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 80/288 (27%), Positives = 143/288 (49%), Gaps = 6/288 (2%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
NE+ F LI + K + A+K M K+G P++V++ +L+ G+ + A ++
Sbjct: 272 NEVTFNTLIDGFCKDENVAAAKKAFEEMQKQGLKPNIVTYNSLINGLCNNGKLEEAIDLW 331
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
+M G +P+ +TY ++ F + KEA +VF D K L P+ F+ MI Y
Sbjct: 332 DKMVGLGLKPNIVTYNALINGFCKKKMMKEATKVFD---DVSKQELVPNVITFNTMIDAY 388
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSL---MSFETNYKEVSKIYDQMQRAGLQPDV 271
K G E+ L + M + G+ + TYN L + + + + ++ ++M+ GL+ DV
Sbjct: 389 CKEGMMEEGFSLCSSMLDEGILPNVSTYNCLIAGLCRKQDLQAAKELLNEMENKGLKGDV 448
Query: 272 VSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKC 331
V+Y +LI+ K + A + EM + G++P H YN L+D + + G + A V
Sbjct: 449 VTYNILIDGLCKNDKSRNAEKLLNEMFNLGLKPNHVTYNTLMDGYCMEGKLKAALNVRTR 508
Query: 332 MRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITY 379
M ++R P++ +Y ++ Y + +E A + + G PN TY
Sbjct: 509 MEKERKQPNVVTYNVLIKGYCKINKLEAANGLLNEMLEKGLNPNRTTY 556
Score = 138 bits (347), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 90/360 (25%), Positives = 165/360 (45%), Gaps = 9/360 (2%)
Query: 99 FLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAY---GRGGRYKNAEAIFR 155
F + I + G NKAE + M G +P+VV++ L++ Y G G+ AEA +
Sbjct: 203 FNIFINGLCRAGKLNKAEDAIEDMKAWGISPNVVTYNTLVDGYCKRGSAGKMYKAEAFMK 262
Query: 156 RMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYK 215
M ++ P+ +T+ ++ F + A++ F + +K LKP+ ++ +I
Sbjct: 263 EMLANKICPNEVTFNTLIDGFCKDENVAAAKKAFEEM---QKQGLKPNIVTYNSLINGLC 319
Query: 216 KAGGYEKARKLFALMAERGVQQSTVTYNSLMSF---ETNYKEVSKIYDQMQRAGLQPDVV 272
G E+A L+ M G++ + VTYN+L++ + KE +K++D + + L P+V+
Sbjct: 320 NNGKLEEAIDLWDKMVGLGLKPNIVTYNALINGFCKKKMMKEATKVFDDVSKQELVPNVI 379
Query: 273 SYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCM 332
++ +I+AY K EE ++ MLD G+ P YN L+ + A+ + M
Sbjct: 380 TFNTMIDAYCKEGMMEEGFSLCSSMLDEGILPNVSTYNCLIAGLCRKQDLQAAKELLNEM 439
Query: 333 RRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNL 392
D+ +Y ++ AEK + G PN +TY TL+ GY L
Sbjct: 440 ENKGLKGDVVTYNILIDGLCKNDKSRNAEKLLNEMFNLGLKPNHVTYNTLMDGYCMEGKL 499
Query: 393 EKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNIL 452
+ + + +M +PN + ++ Y K ++A EM G P++ +I+
Sbjct: 500 KAALNVRTRMEKERKQPNVVTYNVLIKGYCKINKLEAANGLLNEMLEKGLNPNRTTYDIV 559
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 90/359 (25%), Positives = 169/359 (47%), Gaps = 9/359 (2%)
Query: 101 MLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSS 160
ML+ AY K + + A + + G+ S+ S L+ A + + + E +++ M
Sbjct: 135 MLVLAYVKNLELHCAYEAFTRAKDYGFKLSLTSCNPLLSALVKENKIGDVEYVYKEMIKR 194
Query: 161 GPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGY 220
+ T+ I + A K +AE+ + D + + P+ ++ ++ Y K G
Sbjct: 195 RIHTNLNTFNIFINGLCRAGKLNKAED---AIEDMKAWGISPNVVTYNTLVDGYCKRGSA 251
Query: 221 EKARKLFALMAE---RGVQQSTVTYNSLM---SFETNYKEVSKIYDQMQRAGLQPDVVSY 274
K K A M E + + VT+N+L+ + N K +++MQ+ GL+P++V+Y
Sbjct: 252 GKMYKAEAFMKEMLANKICPNEVTFNTLIDGFCKDENVAAAKKAFEEMQKQGLKPNIVTY 311
Query: 275 ALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRR 334
LIN + EEA+ ++++M+ G++P YN L++ F M+ +A VF + +
Sbjct: 312 NSLINGLCNNGKLEEAIDLWDKMVGLGLKPNIVTYNALINGFCKKKMMKEATKVFDDVSK 371
Query: 335 DRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEK 394
P++ ++ TM+ AY ME + +G +PNV TY LI G + +L+
Sbjct: 372 QELVPNVITFNTMIDAYCKEGMMEEGFSLCSSMLDEGILPNVSTYNCLIAGLCRKQDLQA 431
Query: 395 MMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILL 453
E+ ++M G+K + + ++D KN +A EM + G P+ N L+
Sbjct: 432 AKELLNEMENKGLKGDVVTYNILIDGLCKNDKSRNAEKLLNEMFNLGLKPNHVTYNTLM 490
Score = 135 bits (339), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 91/374 (24%), Positives = 179/374 (47%), Gaps = 9/374 (2%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
L++A K+ E V M K+ ++ + + R G+ AE M++ G
Sbjct: 171 LLSALVKENKIGDVEYVYKEMIKRRIHTNLNTFNIFINGLCRAGKLNKAEDAIEDMKAWG 230
Query: 162 PRPSALTYQIILKLFVE---ANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAG 218
P+ +TY ++ + + A K +AE +L + + P++ F+ +I + K
Sbjct: 231 ISPNVVTYNTLVDGYCKRGSAGKMYKAEAFMKEMLANK---ICPNEVTFNTLIDGFCKDE 287
Query: 219 GYEKARKLFALMAERGVQQSTVTYNSLMSFETN---YKEVSKIYDQMQRAGLQPDVVSYA 275
A+K F M ++G++ + VTYNSL++ N +E ++D+M GL+P++V+Y
Sbjct: 288 NVAAAKKAFEEMQKQGLKPNIVTYNSLINGLCNNGKLEEAIDLWDKMVGLGLKPNIVTYN 347
Query: 276 LLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRD 335
LIN + K + +EA VF+++ + P +N ++DA+ GM+++ ++ M +
Sbjct: 348 ALINGFCKKKMMKEATKVFDDVSKQELVPNVITFNTMIDAYCKEGMMEEGFSLCSSMLDE 407
Query: 336 RCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKM 395
P++ +Y +++ D++ A++ ++ G +V+TY LI G K +
Sbjct: 408 GILPNVSTYNCLIAGLCRKQDLQAAKELLNEMENKGLKGDVVTYNILIDGLCKNDKSRNA 467
Query: 396 MEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSL 455
++ ++M G+KPN + T+MD Y +A+ ME P+ N+L+
Sbjct: 468 EKLLNEMFNLGLKPNHVTYNTLMDGYCMEGKLKAALNVRTRMEKERKQPNVVTYNVLIKG 527
Query: 456 AKTADERNEANELL 469
++ AN LL
Sbjct: 528 YCKINKLEAANGLL 541
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 84/365 (23%), Positives = 162/365 (44%), Gaps = 19/365 (5%)
Query: 115 AEKVLSFM-NKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRP--SALTYQI 171
KVL F+ N K Y+ + ++++ + ++ ++F + G RP +AL +
Sbjct: 81 TSKVLHFLANSKRYSKV----RSFLDSFVKNEKH-TVSSVFHSLLLDGGRPGATALIIDM 135
Query: 172 ILKLFVEANKFKEAEEVFMTLLDEE-KSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALM 230
++ +V+ + A E F D K L + ++ K ++ M
Sbjct: 136 LVLAYVKNLELHCAYEAFTRAKDYGFKLSLTSCNPLLSALV----KENKIGDVEYVYKEM 191
Query: 231 AERGVQQSTVTYNSLMSFETNYKEVSKIYDQ---MQRAGLQPDVVSYALLINAY---GKA 284
+R + + T+N ++ +++K D M+ G+ P+VV+Y L++ Y G A
Sbjct: 192 IKRRIHTNLNTFNIFINGLCRAGKLNKAEDAIEDMKAWGISPNVVTYNTLVDGYCKRGSA 251
Query: 285 RREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSY 344
+ +A A +EML + P +N L+D F V A+ F+ M++ P+I +Y
Sbjct: 252 GKMYKAEAFMKEMLANKICPNEVTFNTLIDGFCKDENVAAAKKAFEEMQKQGLKPNIVTY 311
Query: 345 TTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRV 404
++++ N +E A + ++ G PN++TY LI G+ K +++ +++D +
Sbjct: 312 NSLINGLCNNGKLEEAIDLWDKMVGLGLKPNIVTYNALINGFCKKKMMKEATKVFDDVSK 371
Query: 405 NGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNE 464
+ PN F T++DAY K + M G P+ N L++ +
Sbjct: 372 QELVPNVITFNTMIDAYCKEGMMEEGFSLCSSMLDEGILPNVSTYNCLIAGLCRKQDLQA 431
Query: 465 ANELL 469
A ELL
Sbjct: 432 AKELL 436
Score = 39.3 bits (90), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 20/78 (25%), Positives = 37/78 (47%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + + L+ Y +G A V + M K+ P+VV++ L++ Y + + + A +
Sbjct: 482 NHVTYNTLMDGYCMEGKLKAALNVRTRMEKERKQPNVVTYNVLIKGYCKINKLEAANGLL 541
Query: 155 RRMQSSGPRPSALTYQII 172
M G P+ TY I+
Sbjct: 542 NEMLEKGLNPNRTTYDIV 559
>gi|297733647|emb|CBI14894.3| unnamed protein product [Vitis vinifera]
Length = 746
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 108/415 (26%), Positives = 191/415 (46%), Gaps = 48/415 (11%)
Query: 103 ITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRY-KNAEAIFRRMQSSG 161
I+ G ++ A KV M P V+ + ++ + G K+A F+RM G
Sbjct: 249 ISGLSSCGRYDDAWKVYDEMETNNIRPDHVTCSIMITVMRKDGHSAKDAWEFFQRMNRKG 308
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
+ S ++K F + EA + + EK + + +++ ++ Y K+ E
Sbjct: 309 VKWSLEVLGALIKSFCDEGLKNEA---LIIQSEMEKKGISSNAIVYNTLMDAYSKSNRVE 365
Query: 222 KARKLFALMAERGVQQSTVTYNSLM---SFETNYKEVSKIYDQMQRAGLQPDVVSYALLI 278
+A LF M +GV ++ TYN LM S + + + +MQ GL+P+V SY LI
Sbjct: 366 EAEGLFGEMKAKGVMPTSATYNILMDAYSRRMQPEIIENLLLEMQDMGLEPNVKSYTCLI 425
Query: 279 NAYGKARREEEALA-VFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRC 337
+AYG+ ++ + A F M G++PT +Y L+ A+++ G ++A T F+ M+R+
Sbjct: 426 SAYGRQKKMSDMAADAFLRMKKVGIKPTSHSYTALIHAYSVGGWHEKAYTAFENMKREGI 485
Query: 338 SPDICSYTTMLSAYVNASDMEGAEKFFRRLKQD--------------------------- 370
P I +YT +L A+ A D + K ++ + D
Sbjct: 486 KPSIETYTALLDAFRRAGDTQTLMKIWKLMLSDKIEGTRVTFNILLDGFAKQGHYMEARD 545
Query: 371 --------GFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYG 422
GF P V+TY L+ YA+ ++ ++ +M +KP+ ++T++ AY
Sbjct: 546 VIFEFGKIGFQPTVMTYNMLMNAYARGGQHSRLPQLLKEMTSLNLKPDSITYSTMIYAYV 605
Query: 423 KNKDFDSAVVWYKEMESCGFPPD----QKAKNILLSLAKTADERNEANELLGNFN 473
+ +DF A ++K+M G PD QK ++IL A T + R + + +LG N
Sbjct: 606 RVRDFKRAFFYHKQMVKSGQVPDPQSYQKLRSILDVKAATKN-RKDRSAILGIVN 659
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 99/362 (27%), Positives = 165/362 (45%), Gaps = 13/362 (3%)
Query: 129 PSVVSHTA---LMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEA 185
PS+V+ A L GR G + + R + + Y + ++ +A
Sbjct: 202 PSLVTARACSLLFPMLGRAGMGDDLMVLLRNLPKTRQFRDVRIYNSAISGLSSCGRYDDA 261
Query: 186 EEVFMTLLDE-EKSPLKPDQKMFHMMIYMYKKAGGYEK-ARKLFALMAERGVQQSTVTYN 243
+V+ DE E + ++PD +MI + +K G K A + F M +GV+ S
Sbjct: 262 WKVY----DEMETNNIRPDHVTCSIMITVMRKDGHSAKDAWEFFQRMNRKGVKWSLEVLG 317
Query: 244 SLM-SF--ETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDA 300
+L+ SF E E I +M++ G+ + + Y L++AY K+ R EEA +F EM
Sbjct: 318 ALIKSFCDEGLKNEALIIQSEMEKKGISSNAIVYNTLMDAYSKSNRVEEAEGLFGEMKAK 377
Query: 301 GVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDM-EG 359
GV PT YNIL+DA++ + + M+ P++ SYT ++SAY M +
Sbjct: 378 GVMPTSATYNILMDAYSRRMQPEIIENLLLEMQDMGLEPNVKSYTCLISAYGRQKKMSDM 437
Query: 360 AEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMD 419
A F R+K+ G P +Y LI Y+ EK ++ M+ GIKP+ +T ++D
Sbjct: 438 AADAFLRMKKVGIKPTSHSYTALIHAYSVGGWHEKAYTAFENMKREGIKPSIETYTALLD 497
Query: 420 AYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEP 479
A+ + D + + +K M S + NILL EA +++ F +P
Sbjct: 498 AFRRAGDTQTLMKIWKLMLSDKIEGTRVTFNILLDGFAKQGHYMEARDVIFEFGKIGFQP 557
Query: 480 GI 481
+
Sbjct: 558 TV 559
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 94/425 (22%), Positives = 183/425 (43%), Gaps = 21/425 (4%)
Query: 60 KDLVLGTLVRLKQLKKWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVL 119
+DLV+G L EW+ +Q +L G+ G + +L
Sbjct: 184 EDLVMGCLY-------------FFEWMGLQEPSLVTARACSLLFPMLGRAGMGDDLMVLL 230
Query: 120 SFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLF-VE 178
+ K V + + + GRY +A ++ M+++ RP +T I++ + +
Sbjct: 231 RNLPKTRQFRDVRIYNSAISGLSSCGRYDDAWKVYDEMETNNIRPDHVTCSIMITVMRKD 290
Query: 179 ANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQS 238
+ K+A E F + + +K ++ +I + G +A + + M ++G+ +
Sbjct: 291 GHSAKDAWEFFQRM---NRKGVKWSLEVLGALIKSFCDEGLKNEALIIQSEMEKKGISSN 347
Query: 239 TVTYNSLM---SFETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFE 295
+ YN+LM S +E ++ +M+ G+ P +Y +L++AY + + E +
Sbjct: 348 AIVYNTLMDAYSKSNRVEEAEGLFGEMKAKGVMPTSATYNILMDAYSRRMQPEIIENLLL 407
Query: 296 EMLDAGVRPTHKAYNILLDAFAISG-MVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNA 354
EM D G+ P K+Y L+ A+ M D A F M++ P SYT ++ AY
Sbjct: 408 EMQDMGLEPNVKSYTCLISAYGRQKKMSDMAADAFLRMKKVGIKPTSHSYTALIHAYSVG 467
Query: 355 SDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIF 414
E A F +K++G P++ TY L+ + + + + +M+I+ M + I+ + F
Sbjct: 468 GWHEKAYTAFENMKREGIKPSIETYTALLDAFRRAGDTQTLMKIWKLMLSDKIEGTRVTF 527
Query: 415 TTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNH 474
++D + K + A E GF P N+L++ + + +LL
Sbjct: 528 NILLDGFAKQGHYMEARDVIFEFGKIGFQPTVMTYNMLMNAYARGGQHSRLPQLLKEMTS 587
Query: 475 PNNEP 479
N +P
Sbjct: 588 LNLKP 592
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 49/89 (55%)
Query: 97 MDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRR 156
+ F +L+ + KQG + +A V+ K G+ P+V+++ LM AY RGG++ + +
Sbjct: 525 VTFNILLDGFAKQGHYMEARDVIFEFGKIGFQPTVMTYNMLMNAYARGGQHSRLPQLLKE 584
Query: 157 MQSSGPRPSALTYQIILKLFVEANKFKEA 185
M S +P ++TY ++ +V FK A
Sbjct: 585 MTSLNLKPDSITYSTMIYAYVRVRDFKRA 613
>gi|297844848|ref|XP_002890305.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297336147|gb|EFH66564.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 860
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 84/317 (26%), Positives = 152/317 (47%), Gaps = 6/317 (1%)
Query: 70 LKQLKKWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAP 129
LKQ+ + WL+ Q + + + ++ G+ F K+L M + G P
Sbjct: 338 LKQMNDYGNALGFFYWLKRQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQP 397
Query: 130 SVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVF 189
+ V++ L+ +YGR A +F +MQ +G +P +TY ++ + +A A +++
Sbjct: 398 NTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMY 457
Query: 190 MTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFE 249
+ + L PD + ++I KAG A KLF M ++G + VTYN +M
Sbjct: 458 QRM---QAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLH 514
Query: 250 T---NYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTH 306
NY+ K+Y MQ AG +PD V+Y++++ G EEA AVF EM P
Sbjct: 515 AKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDE 574
Query: 307 KAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRR 366
Y +L+D + +G V++A ++ M P++ + ++LS ++ + + A + +
Sbjct: 575 PVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLLPNVPTCNSLLSTFLRVNKIAEAYELLQN 634
Query: 367 LKQDGFVPNVITYGTLI 383
+ G P++ TY L+
Sbjct: 635 MLALGLRPSLQTYTLLL 651
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 88/330 (26%), Positives = 158/330 (47%), Gaps = 8/330 (2%)
Query: 146 RYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQK 205
R++ A +Q+ G R A +LK + N + A F L + + K D
Sbjct: 311 RFRWGPAAEEALQNLGLRIDAYQANQVLK---QMNDYGNALGFFYWL--KRQPGFKHDGH 365
Query: 206 MFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSF--ETNY-KEVSKIYDQM 262
+ M+ +A + KL M G Q +TVTYN L+ NY E +++QM
Sbjct: 366 TYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQM 425
Query: 263 QRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMV 322
Q AG +PD V+Y LI+ + KA + A+ +++ M G+ P Y+++++ +G +
Sbjct: 426 QEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHL 485
Query: 323 DQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTL 382
A +F M C+P++ +Y M+ + A + + A K +R ++ GF P+ +TY +
Sbjct: 486 PAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQSALKLYRDMQNAGFEPDKVTYSIV 545
Query: 383 IKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGF 442
++ LE+ ++ +M+ P++ ++ ++D +GK + + A WY+ M G
Sbjct: 546 MEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGL 605
Query: 443 PPDQKAKNILLSLAKTADERNEANELLGNF 472
P+ N LLS ++ EA ELL N
Sbjct: 606 LPNVPTCNSLLSTFLRVNKIAEAYELLQNM 635
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 86/339 (25%), Positives = 156/339 (46%), Gaps = 16/339 (4%)
Query: 147 YKNAEAIFRRMQ-SSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEE-KSPLKPDQ 204
Y NA F ++ G + TY ++ A +F + LLDE + +P+
Sbjct: 344 YGNALGFFYWLKRQPGFKHDGHTYTTMVGNLGRAKQFGAINK----LLDEMVRDGCQPNT 399
Query: 205 KMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSF--ETNYKEVS-KIYDQ 261
++ +I+ Y +A +A +F M E G + VTY +L+ + + +++ +Y +
Sbjct: 400 VTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQR 459
Query: 262 MQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGM 321
MQ GL PD +Y+++IN GKA A +F EM+D G P YNI++D A +
Sbjct: 460 MQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARN 519
Query: 322 VDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGT 381
A +++ M+ PD +Y+ ++ + +E AE F ++Q ++P+ YG
Sbjct: 520 YQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGL 579
Query: 382 LIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCG 441
L+ + K N+EK + Y M G+ PN +++ + + A + M + G
Sbjct: 580 LVDLWGKAGNVEKAWQWYQAMLHAGLLPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALG 639
Query: 442 FPPDQKAKNILLSLAKTADERNE-----ANELLGNFNHP 475
P + +LLS D R++ +L+ + HP
Sbjct: 640 LRPSLQTYTLLLSCC--TDGRSKLDMGYCGQLMASTGHP 676
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 77/291 (26%), Positives = 144/291 (49%), Gaps = 10/291 (3%)
Query: 63 VLGTLVRLKQLKKWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFM 122
++G L R KQ + ++++L+ + ++ N + + LI +YG+ N+A V + M
Sbjct: 370 MVGNLGRAKQ---FGAINKLLDEM-VRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQM 425
Query: 123 NKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKF 182
+ G P V++ L++ + + G A +++RMQ+ G P TY +I+ +A
Sbjct: 426 QEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHL 485
Query: 183 KEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTY 242
A ++F ++D+ P+ +++M+ ++ KA Y+ A KL+ M G + VTY
Sbjct: 486 PAAHKLFCEMVDQG---CTPNLVTYNIMMDLHAKARNYQSALKLYRDMQNAGFEPDKVTY 542
Query: 243 NSLMSF--ETNY-KEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLD 299
+ +M Y +E ++ +MQ+ PD Y LL++ +GKA E+A ++ ML
Sbjct: 543 SIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLH 602
Query: 300 AGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSA 350
AG+ P N LL F + +A + + M P + +YT +LS
Sbjct: 603 AGLLPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYTLLLSC 653
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 51/217 (23%), Positives = 106/217 (48%)
Query: 263 QRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMV 322
++ G + D +Y ++ G+A++ + +EM+ G +P YN L+ ++ + +
Sbjct: 356 RQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYL 415
Query: 323 DQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTL 382
++A VF M+ C PD +Y T++ + A ++ A ++R++ G P+ TY +
Sbjct: 416 NEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVI 475
Query: 383 IKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGF 442
I K +L +++ +M G PN + +MD + K +++ SA+ Y++M++ GF
Sbjct: 476 INCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQSALKLYRDMQNAGF 535
Query: 443 PPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEP 479
PD+ +I++ + EA + N P
Sbjct: 536 EPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIP 572
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 115/218 (52%), Gaps = 10/218 (4%)
Query: 99 FLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQ 158
+ ++I GK G A K+ M +G P++V++ +M+ + + Y++A ++R MQ
Sbjct: 472 YSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQSALKLYRDMQ 531
Query: 159 SSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAG 218
++G P +TY I++++ +EAE VF + ++K+ + PD+ ++ +++ ++ KAG
Sbjct: 532 NAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEM--QQKNWI-PDEPVYGLLVDLWGKAG 588
Query: 219 GYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSKIYDQMQRA---GLQPDVVSYA 275
EKA + + M G+ + T NSL+S ++++ Y+ +Q GL+P + +Y
Sbjct: 589 NVEKAWQWYQAMLHAGLLPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYT 648
Query: 276 LLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILL 313
LL++ R + + + M G H A+ LL
Sbjct: 649 LLLSCCTDGRSKLDMGYCGQLMASTG----HPAHMFLL 682
>gi|346703736|emb|CBX24404.1| hypothetical_protein [Oryza glaberrima]
Length = 1765
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 96/355 (27%), Positives = 160/355 (45%), Gaps = 6/355 (1%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
LI GK+GD K + M K+G++P+V + ++++A + A I ++M +SG
Sbjct: 1223 LINWLGKKGDLEKIGSLFLEMRKRGFSPNVQIYNSVIDALCKCRSATQAMVILKQMFASG 1282
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
P +T+ ++ ++AE + E L P+Q + +I+ + G
Sbjct: 1283 CDPDIITFNTLITGLCHEGHVRKAEHFLREAIRRE---LNPNQLSYTPLIHGFCMRGELM 1339
Query: 222 KARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSK---IYDQMQRAGLQPDVVSYALLI 278
A L M RG VT+ +L+ +VS+ + ++M + PDV Y +LI
Sbjct: 1340 VASDLLVEMMGRGHTPDVVTFGALIHGLVVAGKVSEALIVREKMTERQVFPDVNIYNVLI 1399
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCS 338
+ K R A + EEML+ V+P Y L+D F S + AR +F+ M
Sbjct: 1400 SGLCKKRMLPAAKNILEEMLEKNVQPDEFVYATLIDGFIRSENLGDARKIFEFMEHKGIC 1459
Query: 339 PDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEI 398
PDI S M+ Y M A +++ G +P+ TY T+I GYAK NL +
Sbjct: 1460 PDIVSCNAMIKGYCQFGMMSEAILCMSNMRKVGCIPDEFTYTTVISGYAKQGNLNGALRW 1519
Query: 399 YDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILL 453
M KPN ++++++ Y K D D A + M++ P+ IL+
Sbjct: 1520 LCDMIKRKCKPNVVTYSSLINGYCKTGDTDFAEGLFANMQAEALSPNVVTYTILI 1574
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 82/340 (24%), Positives = 154/340 (45%), Gaps = 6/340 (1%)
Query: 101 MLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSS 160
+LI Y ++GD + +L M KG+ P++V++ +L+ G+ G + ++F M+
Sbjct: 1187 VLIDGYCRRGDMGRGLLLLGEMETKGFLPTLVTYGSLINWLGKKGDLEKIGSLFLEMRKR 1246
Query: 161 GPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGY 220
G P+ Y ++ K + A + + L S PD F+ +I G
Sbjct: 1247 GFSPNVQIYNSVIDALC---KCRSATQAMVILKQMFASGCDPDIITFNTLITGLCHEGHV 1303
Query: 221 EKARKLFALMAERGVQQSTVTYNSLMSFETNYKEV---SKIYDQMQRAGLQPDVVSYALL 277
KA R + + ++Y L+ E+ S + +M G PDVV++ L
Sbjct: 1304 RKAEHFLREAIRRELNPNQLSYTPLIHGFCMRGELMVASDLLVEMMGRGHTPDVVTFGAL 1363
Query: 278 INAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRC 337
I+ A + EAL V E+M + V P YN+L+ M+ A+ + + M
Sbjct: 1364 IHGLVVAGKVSEALIVREKMTERQVFPDVNIYNVLISGLCKKRMLPAAKNILEEMLEKNV 1423
Query: 338 SPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMME 397
PD Y T++ ++ + ++ A K F ++ G P++++ +IKGY + + + +
Sbjct: 1424 QPDEFVYATLIDGFIRSENLGDARKIFEFMEHKGICPDIVSCNAMIKGYCQFGMMSEAIL 1483
Query: 398 IYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEM 437
MR G P++ +TT++ Y K + + A+ W +M
Sbjct: 1484 CMSNMRKVGCIPDEFTYTTVISGYAKQGNLNGALRWLCDM 1523
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 88/394 (22%), Positives = 167/394 (42%), Gaps = 10/394 (2%)
Query: 30 NWRRLMNQIEEVGSAVAVLRSERTRGQPLPKDLVLGTLVRLKQLKKWNVVSEVLEWLRIQ 89
NW +E++GS +R + V+ L + + + V+ + +
Sbjct: 1225 NWLGKKGDLEKIGSLFLEMRKRGFSPNVQIYNSVIDALCKCRSATQAMVILKQM----FA 1280
Query: 90 SWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKN 149
S D + + F LIT +G KAE L ++ P+ +S+T L+ + G
Sbjct: 1281 SGCDPDIITFNTLITGLCHEGHVRKAEHFLREAIRRELNPNQLSYTPLIHGFCMRGELMV 1340
Query: 150 AEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHM 209
A + M G P +T+ ++ V A K EA V + + + + PD ++++
Sbjct: 1341 ASDLLVEMMGRGHTPDVVTFGALIHGLVVAGKVSEALIVREKMTERQ---VFPDVNIYNV 1397
Query: 210 MIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSF---ETNYKEVSKIYDQMQRAG 266
+I K A+ + M E+ VQ Y +L+ N + KI++ M+ G
Sbjct: 1398 LISGLCKKRMLPAAKNILEEMLEKNVQPDEFVYATLIDGFIRSENLGDARKIFEFMEHKG 1457
Query: 267 LQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQAR 326
+ PD+VS +I Y + EA+ M G P Y ++ +A G ++ A
Sbjct: 1458 ICPDIVSCNAMIKGYCQFGMMSEAILCMSNMRKVGCIPDEFTYTTVISGYAKQGNLNGAL 1517
Query: 327 TVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGY 386
M + +C P++ +Y+++++ Y D + AE F ++ + PNV+TY LI
Sbjct: 1518 RWLCDMIKRKCKPNVVTYSSLINGYCKTGDTDFAEGLFANMQAEALSPNVVTYTILIGSL 1577
Query: 387 AKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDA 420
K + + + ++ M +N PN +++
Sbjct: 1578 FKKDKVLRAGLYFETMLLNHCSPNDVTLHYLVNG 1611
Score = 102 bits (254), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 83/406 (20%), Positives = 166/406 (40%), Gaps = 36/406 (8%)
Query: 112 FNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSS-GPRPSALTYQ 170
F+ + L M+ G AP+ AL+ AY G A + R++ G P
Sbjct: 1057 FDAVDDTLQSMSLAGAAPTRACLGALVAAYADAGMLGKATKMCERVREQYGSLPEVTHCN 1116
Query: 171 IILKLFVEANKFKEAEEVFMTLLDEEKSP---------------------LK-------- 201
+LKL VE ++ +A +++ +L ++ LK
Sbjct: 1117 RLLKLLVEQRRWDDARKLYDEMLGKDSGADNYSTCVLVRGLCLERRVEEGLKLIEARWGA 1176
Query: 202 ---PDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSF---ETNYKEV 255
P ++++I Y + G + L M +G + VTY SL+++ + + +++
Sbjct: 1177 GCIPHVVFYNVLIDGYCRRGDMGRGLLLLGEMETKGFLPTLVTYGSLINWLGKKGDLEKI 1236
Query: 256 SKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDA 315
++ +M++ G P+V Y +I+A K R +A+ + ++M +G P +N L+
Sbjct: 1237 GSLFLEMRKRGFSPNVQIYNSVIDALCKCRSATQAMVILKQMFASGCDPDIITFNTLITG 1296
Query: 316 FAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPN 375
G V +A + R +P+ SYT ++ + ++ A + G P+
Sbjct: 1297 LCHEGHVRKAEHFLREAIRRELNPNQLSYTPLIHGFCMRGELMVASDLLVEMMGRGHTPD 1356
Query: 376 VITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYK 435
V+T+G LI G + + + + +KM + P+ I+ ++ K + +A +
Sbjct: 1357 VVTFGALIHGLVVAGKVSEALIVREKMTERQVFPDVNIYNVLISGLCKKRMLPAAKNILE 1416
Query: 436 EMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGI 481
EM PD+ L+ ++ +A ++ H P I
Sbjct: 1417 EMLEKNVQPDEFVYATLIDGFIRSENLGDARKIFEFMEHKGICPDI 1462
Score = 98.6 bits (244), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 70/369 (18%), Positives = 160/369 (43%), Gaps = 21/369 (5%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N++ + LI + +G+ A +L M +G+ P VV+ AL+ G+ A +
Sbjct: 1321 NQLSYTPLIHGFCMRGELMVASDLLVEMMGRGHTPDVVTFGALIHGLVVAGKVSEALIVR 1380
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
+M P Y +++ + A+ + +L++ ++PD+ ++ +I +
Sbjct: 1381 EKMTERQVFPDVNIYNVLISGLCKKRMLPAAKNILEEMLEKN---VQPDEFVYATLIDGF 1437
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSK---IYDQMQRAGLQPDV 271
++ ARK+F M +G+ V+ N+++ + +S+ M++ G PD
Sbjct: 1438 IRSENLGDARKIFEFMEHKGICPDIVSCNAMIKGYCQFGMMSEAILCMSNMRKVGCIPDE 1497
Query: 272 VSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKC 331
+Y +I+ Y K AL +M+ +P Y+ L++ + +G D A +F
Sbjct: 1498 FTYTTVISGYAKQGNLNGALRWLCDMIKRKCKPNVVTYSSLINGYCKTGDTDFAEGLFAN 1557
Query: 332 MRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGY----- 386
M+ + SP++ +YT ++ + + A +F + + PN +T L+ G
Sbjct: 1558 MQAEALSPNVVTYTILIGSLFKKDKVLRAGLYFETMLLNHCSPNDVTLHYLVNGLTSCTP 1617
Query: 387 ----------AKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKE 436
++V+ + ++ ++ K+ + P + + I+ + ++ A+ +
Sbjct: 1618 CVINSICCNTSEVHGKDALLVVFKKLVFDIGDPRNSAYNAIIFSLCRHNMLREALDFKNR 1677
Query: 437 MESCGFPPD 445
M G+ P+
Sbjct: 1678 MAKKGYVPN 1686
Score = 95.1 bits (235), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 70/332 (21%), Positives = 136/332 (40%), Gaps = 6/332 (1%)
Query: 126 GYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEA 185
G P VV + L++ Y R G + M++ G P+ +TY ++ K +
Sbjct: 1177 GCIPHVVFYNVLIDGYCRRGDMGRGLLLLGEMETKGFLPTLVTYGSLINWL---GKKGDL 1233
Query: 186 EEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSL 245
E++ L+ K P+ ++++ +I K +A + M G +T+N+L
Sbjct: 1234 EKIGSLFLEMRKRGFSPNVQIYNSVIDALCKCRSATQAMVILKQMFASGCDPDIITFNTL 1293
Query: 246 MS---FETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGV 302
++ E + ++ + R L P+ +SY LI+ + A + EM+ G
Sbjct: 1294 ITGLCHEGHVRKAEHFLREAIRRELNPNQLSYTPLIHGFCMRGELMVASDLLVEMMGRGH 1353
Query: 303 RPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEK 362
P + L+ ++G V +A V + M + PD+ Y ++S + A+
Sbjct: 1354 TPDVVTFGALIHGLVVAGKVSEALIVREKMTERQVFPDVNIYNVLISGLCKKRMLPAAKN 1413
Query: 363 FFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYG 422
+ + P+ Y TLI G+ + NL +I++ M GI P+ ++ Y
Sbjct: 1414 ILEEMLEKNVQPDEFVYATLIDGFIRSENLGDARKIFEFMEHKGICPDIVSCNAMIKGYC 1473
Query: 423 KNKDFDSAVVWYKEMESCGFPPDQKAKNILLS 454
+ A++ M G PD+ ++S
Sbjct: 1474 QFGMMSEAILCMSNMRKVGCIPDEFTYTTVIS 1505
Score = 85.9 bits (211), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 73/309 (23%), Positives = 133/309 (43%), Gaps = 25/309 (8%)
Query: 101 MLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSS 160
+LI+ K+ A+ +L M +K P + L++ + R +A IF M+
Sbjct: 1397 VLISGLCKKRMLPAAKNILEEMLEKNVQPDEFVYATLIDGFIRSENLGDARKIFEFMEHK 1456
Query: 161 GPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGY 220
G P ++ ++K + + F E + + + K PD+ + +I Y K G
Sbjct: 1457 GICPDIVSCNAMIKGYCQ---FGMMSEAILCMSNMRKVGCIPDEFTYTTVISGYAKQGNL 1513
Query: 221 EKARKLFALMAERGVQQSTVTYNSLM-----SFETNYKEVSKIYDQMQRAGLQPDVVSYA 275
A + M +R + + VTY+SL+ + +T++ E ++ MQ L P+VV+Y
Sbjct: 1514 NGALRWLCDMIKRKCKPNVVTYSSLINGYCKTGDTDFAE--GLFANMQAEALSPNVVTYT 1571
Query: 276 LLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAF------AISGMV------- 322
+LI + K + A FE ML P + L++ I+ +
Sbjct: 1572 ILIGSLFKKDKVLRAGLYFETMLLNHCSPNDVTLHYLVNGLTSCTPCVINSICCNTSEVH 1631
Query: 323 --DQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYG 380
D VFK + D P +Y ++ + + + A F R+ + G+VPN IT+
Sbjct: 1632 GKDALLVVFKKLVFDIGDPRNSAYNAIIFSLCRHNMLREALDFKNRMAKKGYVPNPITFL 1691
Query: 381 TLIKGYAKV 389
+L+ G+ V
Sbjct: 1692 SLLYGFCSV 1700
>gi|225454948|ref|XP_002277434.1| PREDICTED: pentatricopeptide repeat-containing protein At5g14770,
mitochondrial-like [Vitis vinifera]
Length = 835
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 92/365 (25%), Positives = 173/365 (47%), Gaps = 7/365 (1%)
Query: 108 KQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSAL 167
+ G +A+++ M +G P V++T++M+ + + G+ +A I + M +
Sbjct: 344 RSGRMEEADELFKDMMSRGLLPDRVNYTSMMDGFFKAGKESDAFNIAQEMTEKSSGFDVV 403
Query: 168 TYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLF 227
Y +++ + K++ E F T + + L PD F+ MI Y K G A KL
Sbjct: 404 AYNVLINGLFKLGKYES--ESFHTGM--RQLGLAPDSATFNTMINAYCKEGNLGNALKLL 459
Query: 228 ALMAERGVQQSTVTYNSLMSFETNYKEVSKIYD---QMQRAGLQPDVVSYALLINAYGKA 284
M G++ +++T N L+ E+ K D M G P ++ +++A K+
Sbjct: 460 NEMKSYGLKPNSITCNILVQRLCAAGEIEKTMDLLNDMLVMGFHPTPTTHKAVLDASSKS 519
Query: 285 RREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSY 344
RR + L + ++++ GV+ YN L+ F GM+ +A VFK M DI +Y
Sbjct: 520 RRADVILHMHDQLVGMGVKLDLSTYNTLISTFCRLGMIRRATLVFKDMMGKGILADIITY 579
Query: 345 TTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRV 404
++ Y +S ++ A ++ +G PNV TY L+ G + +++ + ++M+
Sbjct: 580 NALIHGYCISSHLKKAFAVHSQMLTEGVSPNVETYNILLGGLSAARLIKEAAGLVNQMKE 639
Query: 405 NGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNE 464
G+ PN T + ++ +GK + V Y EM + GF P + N+L+S + ++
Sbjct: 640 RGLVPNATTYDILVSGHGKIGNMKECVKLYCEMITKGFVPKTRTYNVLISCFAKGKKMSQ 699
Query: 465 ANELL 469
A EL+
Sbjct: 700 AKELM 704
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 85/352 (24%), Positives = 168/352 (47%), Gaps = 8/352 (2%)
Query: 99 FLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQ 158
F +LI Y + G+ ++A ++L M +G AP +V++ LM + + G A+ + +
Sbjct: 20 FNVLIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGFCKIGDLFTAKKLMGEIS 79
Query: 159 SSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEK-SPLKPDQKMFHMMIYMYKKA 217
P+ +TY ++ + ++ ++A + + DE L PD + ++ K+
Sbjct: 80 LVNLEPNVITYTTLIDAYCKSQCLEDA----LYMYDEMTVKSLVPDVVTYTCIMNGLCKS 135
Query: 218 GGYEKARKLFALMAERGVQQSTVTYNSLMSF---ETNYKEVSKIYDQMQRAGLQPDVVSY 274
G E+A+ +F M E GV + +Y +L+ E N E + +M G+ DVV Y
Sbjct: 136 GKVEEAKSVFREMEEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVVRGIGFDVVVY 195
Query: 275 ALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRR 334
L++ KA A +F+ +L+ + P Y+ L+D G V++ + + M
Sbjct: 196 TALMDGLFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKGELLLQEMEE 255
Query: 335 DRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEK 394
P++ Y++++ Y + A R++ Q +PNV YGTLI GY K +
Sbjct: 256 KHIFPNVIVYSSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTLIDGYFKADQRGI 315
Query: 395 MMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQ 446
++++ +M+ G++ N + + ++ ++ + A +K+M S G PD+
Sbjct: 316 ALDLFKEMKSRGLEENNFVIDSFVNNLKRSGRMEEADELFKDMMSRGLLPDR 367
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 83/345 (24%), Positives = 159/345 (46%), Gaps = 10/345 (2%)
Query: 130 SVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVF 189
SV L++ Y R G A + M++ GP P +TY ++ F + A+++
Sbjct: 16 SVEHFNVLIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGFCKIGDLFTAKKLM 75
Query: 190 --MTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMS 247
++L++ L+P+ + +I Y K+ E A ++ M + + VTY +M+
Sbjct: 76 GEISLVN-----LEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIMN 130
Query: 248 F---ETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRP 304
+E ++ +M+ G+ P+ SYA LI++ K EA + M+ G+
Sbjct: 131 GLCKSGKVEEAKSVFREMEEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVVRGIGF 190
Query: 305 THKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFF 364
Y L+D +GM + A +F+ + + P+ +Y+ ++ + D+ E
Sbjct: 191 DVVVYTALMDGLFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKGELLL 250
Query: 365 RRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKN 424
+ +++ PNVI Y +++ GY K L + M++ KM I PN ++ T++D Y K
Sbjct: 251 QEMEEKHIFPNVIVYSSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTLIDGYFKA 310
Query: 425 KDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELL 469
A+ +KEM+S G + + ++ K + EA+EL
Sbjct: 311 DQRGIALDLFKEMKSRGLEENNFVIDSFVNNLKRSGRMEEADELF 355
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 123/498 (24%), Positives = 210/498 (42%), Gaps = 58/498 (11%)
Query: 13 RRKVEVFKDAADEAGKKNWRRLMNQIEEVGSAVAVLRSERTRGQPLPKDLVLGTLVR-LK 71
RR VE F D + E+ AV +L +T G P P + TL+
Sbjct: 14 RRSVEHFNVLIDGYCRNG---------EISRAVELLEGMKTEG-PAPDIVTYNTLMNGFC 63
Query: 72 QLKKWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSV 131
++ +++ + + + + N + + LI AY K A + M K P V
Sbjct: 64 KIGDLFTAKKLMGEISLVNL-EPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDV 122
Query: 132 VSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIIL-KLFVEANK--------- 181
V++T +M + G+ + A+++FR M+ G P+ +Y ++ LF E N
Sbjct: 123 VTYTCIMNGLCKSGKVEEAKSVFREMEEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGR 182
Query: 182 --------------------FK-----EAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKK 216
FK AE++F LL+E L P+ + +I + K
Sbjct: 183 MVVRGIGFDVVVYTALMDGLFKAGMANNAEDMFQVLLEES---LVPNCVTYSALIDGHCK 239
Query: 217 AGGYEKARKLFALMAERGVQQSTVTYNSLMSFETN---YKEVSKIYDQMQRAGLQPDVVS 273
G K L M E+ + + + Y+S++ T E + +M + + P+V
Sbjct: 240 LGDVNKGELLLQEMEEKHIFPNVIVYSSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVFV 299
Query: 274 YALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMR 333
Y LI+ Y KA + AL +F+EM G+ + + ++ SG +++A +FK M
Sbjct: 300 YGTLIDGYFKADQRGIALDLFKEMKSRGLEENNFVIDSFVNNLKRSGRMEEADELFKDMM 359
Query: 334 RDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRL--KQDGFVPNVITYGTLIKGYAKVNN 391
PD +YT+M+ + A A + + K GF +V+ Y LI G K+
Sbjct: 360 SRGLLPDRVNYTSMMDGFFKAGKESDAFNIAQEMTEKSSGF--DVVAYNVLINGLFKLGK 417
Query: 392 LEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNI 451
E + MR G+ P+ F T+++AY K + +A+ EM+S G P+ NI
Sbjct: 418 YES-ESFHTGMRQLGLAPDSATFNTMINAYCKEGNLGNALKLLNEMKSYGLKPNSITCNI 476
Query: 452 LLSLAKTADERNEANELL 469
L+ A E + +LL
Sbjct: 477 LVQRLCAAGEIEKTMDLL 494
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 95/412 (23%), Positives = 168/412 (40%), Gaps = 40/412 (9%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + + LI + K GD NK E +L M +K P+V+ ++++++ Y + G A +
Sbjct: 226 NCVTYSALIDGHCKLGDVNKGELLLQEMEEKHIFPNVIVYSSIVDGYTKKGLLNEAMDVM 285
Query: 155 RRMQSSGPRPSALTYQ-------------IILKLF-------VEANKF------------ 182
R+M P+ Y I L LF +E N F
Sbjct: 286 RKMVQRNILPNVFVYGTLIDGYFKADQRGIALDLFKEMKSRGLEENNFVIDSFVNNLKRS 345
Query: 183 ---KEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQST 239
+EA+E+F ++ L PD+ + M+ + KAG A + M E+
Sbjct: 346 GRMEEADELFKDMMSR---GLLPDRVNYTSMMDGFFKAGKESDAFNIAQEMTEKSSGFDV 402
Query: 240 VTYNSLMS--FETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEM 297
V YN L++ F+ E + M++ GL PD ++ +INAY K AL + EM
Sbjct: 403 VAYNVLINGLFKLGKYESESFHTGMRQLGLAPDSATFNTMINAYCKEGNLGNALKLLNEM 462
Query: 298 LDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDM 357
G++P NIL+ +G +++ + M P ++ +L A +
Sbjct: 463 KSYGLKPNSITCNILVQRLCAAGEIEKTMDLLNDMLVMGFHPTPTTHKAVLDASSKSRRA 522
Query: 358 EGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTI 417
+ +L G ++ TY TLI + ++ + + ++ M GI + + +
Sbjct: 523 DVILHMHDQLVGMGVKLDLSTYNTLISTFCRLGMIRRATLVFKDMMGKGILADIITYNAL 582
Query: 418 MDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELL 469
+ Y + A + +M + G P+ + NILL A EA L+
Sbjct: 583 IHGYCISSHLKKAFAVHSQMLTEGVSPNVETYNILLGGLSAARLIKEAAGLV 634
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/295 (21%), Positives = 131/295 (44%), Gaps = 18/295 (6%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + +L+ G+ K +L+ M G+ P+ +H A+++A + R +
Sbjct: 470 NSITCNILVQRLCAAGEIEKTMDLLNDMLVMGFHPTPTTHKAVLDASSKSRRADVILHMH 529
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
++ G + TY ++ F + A VF ++ + + D ++ +I+ Y
Sbjct: 530 DQLVGMGVKLDLSTYNTLISTFCRLGMIRRATLVFKDMMGK---GILADIITYNALIHGY 586
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSLM---SFETNYKEVSKIYDQMQRAGLQPDV 271
+ +KA + + M GV + TYN L+ S KE + + +QM+ GL P+
Sbjct: 587 CISSHLKKAFAVHSQMLTEGVSPNVETYNILLGGLSAARLIKEAAGLVNQMKERGLVPNA 646
Query: 272 VSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKC 331
+Y +L++ +GK +E + ++ EM+ G P + YN+L+ FA + QA+ + +
Sbjct: 647 TTYDILVSGHGKIGNMKECVKLYCEMITKGFVPKTRTYNVLISCFAKGKKMSQAKELMQE 706
Query: 332 MRRDRCSPDICSYTTMLSAYVNASD------------MEGAEKFFRRLKQDGFVP 374
M+ P+ +Y ++ + S A++ F + + GF+P
Sbjct: 707 MQVRGIPPNSSTYDILICGWYKLSKQPELNKSLKRSYQAEAKRLFEEMNEKGFIP 761
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 79/145 (54%)
Query: 302 VRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAE 361
+R + + +N+L+D + +G + +A + + M+ + +PDI +Y T+++ + D+ A+
Sbjct: 13 IRRSVEHFNVLIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGFCKIGDLFTAK 72
Query: 362 KFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAY 421
K + PNVITY TLI Y K LE + +YD+M V + P+ +T IM+
Sbjct: 73 KLMGEISLVNLEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIMNGL 132
Query: 422 GKNKDFDSAVVWYKEMESCGFPPDQ 446
K+ + A ++EME G P++
Sbjct: 133 CKSGKVEEAKSVFREMEEVGVVPNR 157
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 42/175 (24%), Positives = 81/175 (46%)
Query: 263 QRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMV 322
Q ++ V + +LI+ Y + A+ + E M G P YN L++ F G +
Sbjct: 9 QHPEIRRSVEHFNVLIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGFCKIGDL 68
Query: 323 DQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTL 382
A+ + + P++ +YTT++ AY + +E A + + VP+V+TY +
Sbjct: 69 FTAKKLMGEISLVNLEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCI 128
Query: 383 IKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEM 437
+ G K +E+ ++ +M G+ PN+ + T++D+ K + A V M
Sbjct: 129 MNGLCKSGKVEEAKSVFREMEEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGRM 183
>gi|302756535|ref|XP_002961691.1| hypothetical protein SELMODRAFT_403786 [Selaginella moellendorffii]
gi|300170350|gb|EFJ36951.1| hypothetical protein SELMODRAFT_403786 [Selaginella moellendorffii]
Length = 545
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 95/399 (23%), Positives = 182/399 (45%), Gaps = 44/399 (11%)
Query: 87 RIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGR 146
+++ ++ +E+ + L+ + K GD KA + M G A + SH ++ GG+
Sbjct: 128 HMKNVFEPDEVSYNTLMNGFFKAGDVKKALALFGEMKDSGIA-VLRSHNIVLRGLCSGGK 186
Query: 147 YKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKM 206
A +F+ M S P+ ++Y I++ ++ K +A +F ++D+ + PD
Sbjct: 187 ISMAWEVFKDM-SGIFSPNLISYTIMIDGLCKSRKVDKAITLFKQMVDKA---IYPDVVT 242
Query: 207 FHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVS---KIYDQMQ 263
+ +I K ++A LF +G + VTYN+++ + +YD M
Sbjct: 243 YGALIDGLGKQRRVKEAYDLFEEARAKGCHPTVVTYNTMIDGLCKCGRIENALTLYDDMV 302
Query: 264 R-AGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMV 322
R L+PD+ +Y+ LIN + R E+A ++EEMLD G P YN LLD SG
Sbjct: 303 REPHLKPDMFTYSALINGLNLSNRGEKAYELYEEMLDTGCSPDVVTYNTLLDGLCKSGCE 362
Query: 323 DQARTVFKCM-RRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGT 381
D+A +F+ M + C P++ +YT ++ + + A K + ++ +P+ +T+ T
Sbjct: 363 DKAMEIFRKMGVGNVCDPNVITYTVLIDRFCKVDRLGDAVKLAKEMEGRSLLPDAVTFTT 422
Query: 382 LIK----------------------------------GYAKVNNLEKMMEIYDKMRVNGI 407
+I+ GY K+ ++ +++D+M +G
Sbjct: 423 VIQKLCKESRIDEAHELFESIGKTCKPDSVLFNTMLAGYCKITRIDDAKKLHDRMLDSGC 482
Query: 408 KPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQ 446
P +T ++ + + + A++ Y EM GFPP++
Sbjct: 483 APTLATYTALVTGFCRTGRYSDALIMYHEMIEMGFPPER 521
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 117/428 (27%), Positives = 180/428 (42%), Gaps = 45/428 (10%)
Query: 55 GQPLPKDLVLGTLVRLKQLKKWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNK 114
G L DLV + R+ N EV +W QS + N L++ Y K
Sbjct: 64 GDILVPDLVGKVIHRIPD---PNTAWEVFQWAGKQSKFTHNRFTCNNLLSVYVKARRVED 120
Query: 115 AEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILK 174
A K + P VS+ LM + + G K A A+F M+ SG ++ I+L+
Sbjct: 121 AHLFFQSHMKNVFEPDEVSYNTLMNGFFKAGDVKKALALFGEMKDSG-IAVLRSHNIVLR 179
Query: 175 LFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERG 234
K A EVF + P+ + +MI K+ +KA LF M ++
Sbjct: 180 GLCSGGKISMAWEVF----KDMSGIFSPNLISYTIMIDGLCKSRKVDKAITLFKQMVDKA 235
Query: 235 VQQSTVTYNSLMSFETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVF 294
+ PDVV+Y LI+ GK RR +EA +F
Sbjct: 236 IY--------------------------------PDVVTYGALIDGLGKQRRVKEAYDLF 263
Query: 295 EEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRD-RCSPDICSYTTMLSAYVN 353
EE G PT YN ++D G ++ A T++ M R+ PD+ +Y+ +++
Sbjct: 264 EEARAKGCHPTVVTYNTMIDGLCKCGRIENALTLYDDMVREPHLKPDMFTYSALINGLNL 323
Query: 354 ASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRV-NGIKPNQT 412
++ E A + + + G P+V+TY TL+ G K +K MEI+ KM V N PN
Sbjct: 324 SNRGEKAYELYEEMLDTGCSPDVVTYNTLLDGLCKSGCEDKAMEIFRKMGVGNVCDPNVI 383
Query: 413 IFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKA-KNILLSLAKTA--DERNEANELL 469
+T ++D + K AV KEME PD ++ L K + DE +E E +
Sbjct: 384 TYTVLIDRFCKVDRLGDAVKLAKEMEGRSLLPDAVTFTTVIQKLCKESRIDEAHELFESI 443
Query: 470 GNFNHPNN 477
G P++
Sbjct: 444 GKTCKPDS 451
Score = 43.5 bits (101), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 63/129 (48%), Gaps = 4/129 (3%)
Query: 37 QIEEVGSAVAVLRSERTRGQPLPKDLVLGTLVRLKQLKKWNVVSEVLEWLR-IQSWWDFN 95
+++ +G AV + ++ G+ L D V T V +++L K + + E E I +
Sbjct: 394 KVDRLGDAVKL--AKEMEGRSLLPDAVTFTTV-IQKLCKESRIDEAHELFESIGKTCKPD 450
Query: 96 EMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFR 155
+ F ++ Y K + A+K+ M G AP++ ++TAL+ + R GRY +A ++
Sbjct: 451 SVLFNTMLAGYCKITRIDDAKKLHDRMLDSGCAPTLATYTALVTGFCRTGRYSDALIMYH 510
Query: 156 RMQSSGPRP 164
M G P
Sbjct: 511 EMIEMGFPP 519
>gi|357449261|ref|XP_003594907.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355483955|gb|AES65158.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1385
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 108/432 (25%), Positives = 195/432 (45%), Gaps = 34/432 (7%)
Query: 41 VGSAVAVLRSERTRG---QPLPKDLVLGTLVRLKQLKK-WNVVSEVLEWLRIQSWWDFNE 96
VG AV R RG ++VLG+LV+ +++ W+ E+ I + N
Sbjct: 125 VGDAVEAFRLMGFRGFSPSVFTCNMVLGSLVKDREVDLFWSFFKEM-----IANRVSPNV 179
Query: 97 MDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRR 156
F +L+ A ++G F A +L M++ G+ P+ V++ L+ Y + GRYK A +
Sbjct: 180 ATFNILLNALCERGKFKSAGVLLRKMDETGHFPTAVTYNTLLNWYCKKGRYKAASELIDA 239
Query: 157 MQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKK 216
M S G TY +++ ++ + + ++ L K+ + P++ ++ +I K
Sbjct: 240 MASKGIAADVCTYNVLIDDLCRKSR---SAKGYLILRRMRKNMVYPNEITYNTLINGLVK 296
Query: 217 AGGYEKARKLFALMAERGVQQSTVTYNSLM---SFETNYKEVSKIYDQMQRAGLQPDVVS 273
G A K+F M+ + ++VTYN+L+ N +E ++ D M GL+P+ V+
Sbjct: 297 EGKIGVATKVFEEMSLCNLLPNSVTYNTLIFGHCSNGNIEEALRLCDVMVSHGLRPNEVT 356
Query: 274 YALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMR 333
Y L+N K + +V E M GVR H +Y ++D +G++++A + M
Sbjct: 357 YGALLNGISKHAQFGLVSSVLERMRMDGVRVGHISYTTMIDGLCKNGLLEEAVQLLDDML 416
Query: 334 RDRCSPDICSYT-------------------TMLSAYVNASDMEGAEKFFRRLKQDGFVP 374
+ SPDI +++ T++ Y +++ A + + Q G V
Sbjct: 417 KVSVSPDIVTFSVLVNGFLKTGLVPNRVLHSTLIYNYCKMGNLKEALNAYAVMNQSGHVS 476
Query: 375 NVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWY 434
+ T L+ + + LE+ D M G+ P+ F I+D YG + D A +
Sbjct: 477 DHFTSSVLVASFCRCGRLEEAEYFVDHMSRMGLAPSSVTFDCIIDTYGNSGDALKAFSVF 536
Query: 435 KEMESCGFPPDQ 446
+M S G P Q
Sbjct: 537 DKMNSLGHLPSQ 548
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 87/358 (24%), Positives = 160/358 (44%), Gaps = 7/358 (1%)
Query: 101 MLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSS 160
+L+ ++ + G +AE + M++ G APS V+ +++ YG G A ++F +M S
Sbjct: 483 VLVASFCRCGRLEEAEYFVDHMSRMGLAPSSVTFDCIIDTYGNSGDALKAFSVFDKMNSL 542
Query: 161 GPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGY 220
G PS TY+ +LK + EA+ +FM P ++ M+ + ++G
Sbjct: 543 GHLPSQFTYEGLLKGLLIGGHINEAK-IFMH--RPSSIPYAIGSTFYNTMLTLTSRSGNL 599
Query: 221 EKARKLFALMAERGVQQSTVTYNSLMS-FETNYKEVSKIY---DQMQRAGLQPDVVSYAL 276
A L M + TY SL++ K V + +++ L P+ Y
Sbjct: 600 SNAVALLDEMVMNNFVPDSFTYTSLIAGLCRKGKMVPALLLSGRAIEKGLLSPNPAMYTS 659
Query: 277 LINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDR 336
L++ K + AL +FE+ML+ GV+P A+N+LLD ++ G + + + MR
Sbjct: 660 LVDGLLKEGHSKAALYMFEDMLNEGVQPDAIAFNVLLDRYSRKGKMSKVNDILSTMRSRS 719
Query: 337 CSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMM 396
++ +Y +L Y M K + + GF P+ +T+ +LI GY K +L+ +
Sbjct: 720 LCFNLATYNILLHGYSKRHGMARCSKLYNEMIIHGFAPDRLTWHSLILGYCKSGSLDVAV 779
Query: 397 EIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLS 454
+ K+ V G K + ++ + + A K++ G P+ N L +
Sbjct: 780 KFLRKITVEGFKVDCFTLNVLVSKLCERNEIKMAFDLVKQLNMLGVTPNVDTYNSLFN 837
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 87/361 (24%), Positives = 153/361 (42%), Gaps = 35/361 (9%)
Query: 126 GYAPSVVSHT------------ALMEAYG-----------------RGGRYKNAEAIFRR 156
GYA + +SH ALME Y R +A FR
Sbjct: 75 GYAKTTLSHMLHMDVGFNNVFGALMETYPFCNSNPAVFDLLIRVCLRENMVGDAVEAFRL 134
Query: 157 MQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKK 216
M G PS T ++L V+ + F ++ SP + F++++ +
Sbjct: 135 MGFRGFSPSVFTCNMVLGSLVKDREVDLFWSFFKEMIANRVSP---NVATFNILLNALCE 191
Query: 217 AGGYEKARKLFALMAERGVQQSTVTYNSLMSF---ETNYKEVSKIYDQMQRAGLQPDVVS 273
G ++ A L M E G + VTYN+L+++ + YK S++ D M G+ DV +
Sbjct: 192 RGKFKSAGVLLRKMDETGHFPTAVTYNTLLNWYCKKGRYKAASELIDAMASKGIAADVCT 251
Query: 274 YALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMR 333
Y +LI+ + R + + M V P YN L++ G + A VF+ M
Sbjct: 252 YNVLIDDLCRKSRSAKGYLILRRMRKNMVYPNEITYNTLINGLVKEGKIGVATKVFEEMS 311
Query: 334 RDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLE 393
P+ +Y T++ + + ++E A + + G PN +TYG L+ G +K
Sbjct: 312 LCNLLPNSVTYNTLIFGHCSNGNIEEALRLCDVMVSHGLRPNEVTYGALLNGISKHAQFG 371
Query: 394 KMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILL 453
+ + ++MR++G++ +TT++D KN + AV +M PD ++L+
Sbjct: 372 LVSSVLERMRMDGVRVGHISYTTMIDGLCKNGLLEEAVQLLDDMLKVSVSPDIVTFSVLV 431
Query: 454 S 454
+
Sbjct: 432 N 432
Score = 105 bits (263), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 90/386 (23%), Positives = 163/386 (42%), Gaps = 25/386 (6%)
Query: 91 WWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNA 150
+ + N F +LI ++ A + M +G++PSV + ++ + +
Sbjct: 104 FCNSNPAVFDLLIRVCLRENMVGDAVEAFRLMGFRGFSPSVFTCNMVLGSLVKDREVDLF 163
Query: 151 EAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMM 210
+ F+ M ++ P+ T+ I+L E KFK A V + +DE P ++ +
Sbjct: 164 WSFFKEMIANRVSPNVATFNILLNALCERGKFKSAG-VLLRKMDETGH--FPTAVTYNTL 220
Query: 211 IYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSK---IYDQMQRAGL 267
+ Y K G Y+ A +L MA +G+ TYN L+ +K I +M++ +
Sbjct: 221 LNWYCKKGRYKAASELIDAMASKGIAADVCTYNVLIDDLCRKSRSAKGYLILRRMRKNMV 280
Query: 268 QPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQART 327
P+ ++Y LIN K + A VFEEM + P YN L+ +G +++A
Sbjct: 281 YPNEITYNTLINGLVKEGKIGVATKVFEEMSLCNLLPNSVTYNTLIFGHCSNGNIEEALR 340
Query: 328 VFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYA 387
+ M P+ +Y +L+ + R++ DG I+Y T+I G
Sbjct: 341 LCDVMVSHGLRPNEVTYGALLNGISKHAQFGLVSSVLERMRMDGVRVGHISYTTMIDGLC 400
Query: 388 KVNNLEKMMEIYDKM--------------RVN-----GIKPNQTIFTTIMDAYGKNKDFD 428
K LE+ +++ D M VN G+ PN+ + +T++ Y K +
Sbjct: 401 KNGLLEEAVQLLDDMLKVSVSPDIVTFSVLVNGFLKTGLVPNRVLHSTLIYNYCKMGNLK 460
Query: 429 SAVVWYKEMESCGFPPDQKAKNILLS 454
A+ Y M G D ++L++
Sbjct: 461 EALNAYAVMNQSGHVSDHFTSSVLVA 486
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 83/392 (21%), Positives = 161/392 (41%), Gaps = 42/392 (10%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
++T + G+ + A +L M + P ++T+L+ R G+ A + R G
Sbjct: 589 MLTLTSRSGNLSNAVALLDEMVMNNFVPDSFTYTSLIAGLCRKGKMVPALLLSGRAIEKG 648
Query: 162 P-RPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGY 220
P+ Y ++ ++ K A +F +L+E ++PD F++++ Y + G
Sbjct: 649 LLSPNPAMYTSLVDGLLKEGHSKAALYMFEDMLNEG---VQPDAIAFNVLLDRYSRKGKM 705
Query: 221 EKARKLFALMAERGVQQSTVTYNSLM---SFETNYKEVSKIYDQMQRAGLQPDVVSYALL 277
K + + M R + + TYN L+ S SK+Y++M G PD +++ L
Sbjct: 706 SKVNDILSTMRSRSLCFNLATYNILLHGYSKRHGMARCSKLYNEMIIHGFAPDRLTWHSL 765
Query: 278 INAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRC 337
I Y K+ + A+ ++ G + N+L+ + A + K +
Sbjct: 766 ILGYCKSGSLDVAVKFLRKITVEGFKVDCFTLNVLVSKLCERNEIKMAFDLVKQLNMLGV 825
Query: 338 SPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMME 397
+P++ +Y ++ + +V + A L ++G+ P + TLI+G ++ N++ ME
Sbjct: 826 TPNVDTYNSLFNGFVRTCSFDEARCILHALLENGYAPTCKQFTTLIRGMCRMGNVKGAME 885
Query: 398 IYDKMRVNGIK-----------------------------------PNQTIFTTIMDAYG 422
+ D+M++ G+ P FTT+M Y
Sbjct: 886 LQDEMKILGVSSQGVAMSAIIRGLARSRKTDEATRILGIMLEMQIIPTVATFTTLMHTYC 945
Query: 423 KNKDFDSAVVWYKEMESCGFPPDQKAKNILLS 454
K + A+ ME C D A N+L+S
Sbjct: 946 KEGNVAKALELRSVMEQCHVKLDVAAYNVLIS 977
Score = 95.5 bits (236), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 80/372 (21%), Positives = 153/372 (41%), Gaps = 7/372 (1%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
L+ K+G A + M +G P ++ L++ Y R G+ I M+S
Sbjct: 660 LVDGLLKEGHSKAALYMFEDMLNEGVQPDAIAFNVLLDRYSRKGKMSKVNDILSTMRSRS 719
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
+ TY I+L + + + +++ ++ PD+ +H +I Y K+G +
Sbjct: 720 LCFNLATYNILLHGYSKRHGMARCSKLYNEMIIHG---FAPDRLTWHSLILGYCKSGSLD 776
Query: 222 KARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSKIYD---QMQRAGLQPDVVSYALLI 278
A K + G + T N L+S E+ +D Q+ G+ P+V +Y L
Sbjct: 777 VAVKFLRKITVEGFKVDCFTLNVLVSKLCERNEIKMAFDLVKQLNMLGVTPNVDTYNSLF 836
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCS 338
N + + +EA + +L+ G PT K + L+ G V A + M+ S
Sbjct: 837 NGFVRTCSFDEARCILHALLENGYAPTCKQFTTLIRGMCRMGNVKGAMELQDEMKILGVS 896
Query: 339 PDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEI 398
+ + ++ + + A + + + +P V T+ TL+ Y K N+ K +E+
Sbjct: 897 SQGVAMSAIIRGLARSRKTDEATRILGIMLEMQIIPTVATFTTLMHTYCKEGNVAKALEL 956
Query: 399 YDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILL-SLAK 457
M +K + + ++ + D +A Y+EME P+ +L+ S
Sbjct: 957 RSVMEQCHVKLDVAAYNVLISGLCADGDIQAAFKLYEEMEQRDIWPNTSIYIVLIDSFLC 1016
Query: 458 TADERNEANELL 469
T + E+ +LL
Sbjct: 1017 TGNYIVESEKLL 1028
Score = 91.7 bits (226), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 66/320 (20%), Positives = 140/320 (43%), Gaps = 7/320 (2%)
Query: 75 KWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSH 134
K + V+++L +R +S FN + +L+ Y K+ + K+ + M G+AP ++
Sbjct: 704 KMSKVNDILSTMRSRSLC-FNLATYNILLHGYSKRHGMARCSKLYNEMIIHGFAPDRLTW 762
Query: 135 TALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLD 194
+L+ Y + G A R++ G + T +++ E N+ K A ++ L
Sbjct: 763 HSLILGYCKSGSLDVAVKFLRKITVEGFKVDCFTLNVLVSKLCERNEIKMAFDLVKQL-- 820
Query: 195 EEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSL---MSFETN 251
+ P+ ++ + + + +++AR + + E G + + +L M N
Sbjct: 821 -NMLGVTPNVDTYNSLFNGFVRTCSFDEARCILHALLENGYAPTCKQFTTLIRGMCRMGN 879
Query: 252 YKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNI 311
K ++ D+M+ G+ V+ + +I ++R+ +EA + ML+ + PT +
Sbjct: 880 VKGAMELQDEMKILGVSSQGVAMSAIIRGLARSRKTDEATRILGIMLEMQIIPTVATFTT 939
Query: 312 LLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDG 371
L+ + G V +A + M + D+ +Y ++S D++ A K + ++Q
Sbjct: 940 LMHTYCKEGNVAKALELRSVMEQCHVKLDVAAYNVLISGLCADGDIQAAFKLYEEMEQRD 999
Query: 372 FVPNVITYGTLIKGYAKVNN 391
PN Y LI + N
Sbjct: 1000 IWPNTSIYIVLIDSFLCTGN 1019
Score = 44.7 bits (104), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 28/110 (25%), Positives = 48/110 (43%)
Query: 360 AEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMD 419
A + FR + GF P+V T ++ K ++ + +M N + PN F +++
Sbjct: 128 AVEAFRLMGFRGFSPSVFTCNMVLGSLVKDREVDLFWSFFKEMIANRVSPNVATFNILLN 187
Query: 420 AYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELL 469
A + F SA V ++M+ G P N LL+ A+EL+
Sbjct: 188 ALCERGKFKSAGVLLRKMDETGHFPTAVTYNTLLNWYCKKGRYKAASELI 237
>gi|297837161|ref|XP_002886462.1| binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297332303|gb|EFH62721.1| binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 550
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 92/346 (26%), Positives = 164/346 (47%), Gaps = 12/346 (3%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
+I + K N A + +KG P+VV++TAL+ GR+ +A + R M
Sbjct: 196 IIDSLCKTRRVNDALDFFKEIGRKGIRPNVVTYTALVNGLCNSGRWNDAARLLRDMIKRK 255
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
P+ +TY +L FV+ K EA+E+F ++ + + PD + +I +
Sbjct: 256 ITPNVITYSALLDAFVKNGKVLEAKEIFEEMV---RMSIDPDIVTYSSLINGLCLHDRID 312
Query: 222 KARKLFALMAERGVQQSTVTYNSLMSFETNYKEVS---KIYDQMQRAGLQPDVVSYALLI 278
+A ++F LM +G V+YN+L++ K V K++ +M + GL + V+Y LI
Sbjct: 313 EANQMFDLMVSKGCFPDVVSYNTLINGFCKAKRVEDGMKLFRKMSQRGLVNNTVTYNTLI 372
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCS 338
+ + ++A F +M GV P YNILL +G++++A +F+ M++
Sbjct: 373 QGFFQVGDVDKAQEFFSQMDSFGVSPDIWTYNILLGGLCDNGLLEKALVIFEDMQKSEMD 432
Query: 339 PDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEI 398
DI +YTT++ +E A F L G P+++TY T++ G ++ +
Sbjct: 433 LDIVTYTTVIQGMCKTGKVEDAWGLFCSLSLKGLKPDIVTYTTMMSGLCTKGLQHEVEAL 492
Query: 399 YDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPP 444
Y KM+ G+ N ++ + D + K+M SCG+ P
Sbjct: 493 YTKMKQEGLMKNDSMLCL------GDGDITISAELIKKMLSCGYAP 532
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 96/403 (23%), Positives = 191/403 (47%), Gaps = 52/403 (12%)
Query: 44 AVAVLRSERTRGQPLPKDLVLGTLVR-LKQLKKWNVVSEV---LEWLRIQS-WWDFNEMD 98
A+ + R E + +P P + L+ + ++KK++VV + +E L I++ + FN
Sbjct: 69 AINLFR-EMVKTRPFPSIVDFNRLLSAIVKMKKYDVVISLGKKMEVLGIRNDLYTFN--- 124
Query: 99 FLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQ 158
++I + + A VL M K GY P V+ +L+ + R R +A ++ +M
Sbjct: 125 --IVINCFCCCFQVSLALSVLGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMV 182
Query: 159 SSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAG 218
G RP + Y I+ + + +A + F K+ G
Sbjct: 183 EIGYRPDIVAYNAIIDSLCKTRRVNDALDFF-------------------------KEIG 217
Query: 219 GYEKARKLFALMAERGVQQSTVTYNSLMSFETN---YKEVSKIYDQMQRAGLQPDVVSYA 275
+G++ + VTY +L++ N + + +++ M + + P+V++Y+
Sbjct: 218 -------------RKGIRPNVVTYTALVNGLCNSGRWNDAARLLRDMIKRKITPNVITYS 264
Query: 276 LLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRD 335
L++A+ K + EA +FEEM+ + P Y+ L++ + +D+A +F M
Sbjct: 265 ALLDAFVKNGKVLEAKEIFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSK 324
Query: 336 RCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKM 395
C PD+ SY T+++ + A +E K FR++ Q G V N +TY TLI+G+ +V +++K
Sbjct: 325 GCFPDVVSYNTLINGFCKAKRVEDGMKLFRKMSQRGLVNNTVTYNTLIQGFFQVGDVDKA 384
Query: 396 MEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEME 438
E + +M G+ P+ + ++ N + A+V +++M+
Sbjct: 385 QEFFSQMDSFGVSPDIWTYNILLGGLCDNGLLEKALVIFEDMQ 427
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 86/328 (26%), Positives = 159/328 (48%), Gaps = 6/328 (1%)
Query: 129 PSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEV 188
PS+V L+ A + +Y ++ ++M+ G R T+ I++ F + A V
Sbjct: 83 PSIVDFNRLLSAIVKMKKYDVVISLGKKMEVLGIRNDLYTFNIVINCFCCCFQVSLALSV 142
Query: 189 FMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSF 248
+L K +PD+ ++ + + A L M E G + V YN+++
Sbjct: 143 LGKML---KLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYRPDIVAYNAIIDS 199
Query: 249 ETNYKEVSKIYD---QMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPT 305
+ V+ D ++ R G++P+VV+Y L+N + R +A + +M+ + P
Sbjct: 200 LCKTRRVNDALDFFKEIGRKGIRPNVVTYTALVNGLCNSGRWNDAARLLRDMIKRKITPN 259
Query: 306 HKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFR 365
Y+ LLDAF +G V +A+ +F+ M R PDI +Y+++++ ++ A + F
Sbjct: 260 VITYSALLDAFVKNGKVLEAKEIFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFD 319
Query: 366 RLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNK 425
+ G P+V++Y TLI G+ K +E M+++ KM G+ N + T++ + +
Sbjct: 320 LMVSKGCFPDVVSYNTLINGFCKAKRVEDGMKLFRKMSQRGLVNNTVTYNTLIQGFFQVG 379
Query: 426 DFDSAVVWYKEMESCGFPPDQKAKNILL 453
D D A ++ +M+S G PD NILL
Sbjct: 380 DVDKAQEFFSQMDSFGVSPDIWTYNILL 407
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/202 (20%), Positives = 90/202 (44%)
Query: 288 EEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTM 347
+A+ +F EM+ P+ +N LL A D ++ K M D+ ++ +
Sbjct: 67 HDAINLFREMVKTRPFPSIVDFNRLLSAIVKMKKYDVVISLGKKMEVLGIRNDLYTFNIV 126
Query: 348 LSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGI 407
++ + + A ++ + G+ P+ +T G+L+ G+ + N + + + DKM G
Sbjct: 127 INCFCCCFQVSLALSVLGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGY 186
Query: 408 KPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANE 467
+P+ + I+D+ K + + A+ ++KE+ G P+ L++ + N+A
Sbjct: 187 RPDIVAYNAIIDSLCKTRRVNDALDFFKEIGRKGIRPNVVTYTALVNGLCNSGRWNDAAR 246
Query: 468 LLGNFNHPNNEPGINGLSISVD 489
LL + P + S +D
Sbjct: 247 LLRDMIKRKITPNVITYSALLD 268
>gi|356529495|ref|XP_003533326.1| PREDICTED: uncharacterized protein LOC100779660 [Glycine max]
Length = 1205
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 95/394 (24%), Positives = 184/394 (46%), Gaps = 10/394 (2%)
Query: 63 VLGTLVRLKQLKKWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFM 122
+L + ++K +S LE IQ D ++ +LI + G VL+ +
Sbjct: 65 ILDSFAKMKHYSTAVSLSHRLELKGIQP--DLITLN--ILINCFCHMGQITFGFSVLAKI 120
Query: 123 NKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKF 182
K+GY P V+ L++ G+ K A ++ + G + + ++Y ++ +
Sbjct: 121 LKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYGTLINGVCKIGDT 180
Query: 183 KEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTY 242
+ A ++ + + KP+ M+ +I K +A LF+ M +G+ VTY
Sbjct: 181 RAAIKLLQKI---DGRLTKPNVVMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVTY 237
Query: 243 NSLM---SFETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLD 299
++L+ E KE + ++M + P+V +Y +L++A K + +EA +V ML
Sbjct: 238 STLIYGFCIEGKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKSVLAVMLK 297
Query: 300 AGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEG 359
A V+P Y+ L+D + + V +A+ VF M +PD+ +YT +++ + ++
Sbjct: 298 ACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKNKMVDE 357
Query: 360 AEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMD 419
A F+ + Q VP ++TY +LI G K + + ++ D+M G N +++++D
Sbjct: 358 ALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRIPYVWDLIDEMHDRGQPANVITYSSLID 417
Query: 420 AYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILL 453
KN D A+ + +M+ G P+ ILL
Sbjct: 418 GLCKNGHLDRAIALFNKMKDQGIRPNTFTFTILL 451
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 106/429 (24%), Positives = 195/429 (45%), Gaps = 15/429 (3%)
Query: 40 EVGSAVAVLRSERTRGQPLPKDLVLGTLVRLKQLKKWNVVSEVLEWL--RIQSWWDFNEM 97
++ +VL RG P P + L TL++ LK V + L + + + N++
Sbjct: 109 QITFGFSVLAKILKRGYP-PDTVTLNTLIKGLCLKGQ--VKKALHFHDKLLAQGFQLNQV 165
Query: 98 DFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRM 157
+ LI K GD A K+L ++ + P+VV ++ +++A + A +F M
Sbjct: 166 SYGTLINGVCKIGDTRAAIKLLQKIDGRLTKPNVVMYSTIIDALCKYQLVSEAYGLFSEM 225
Query: 158 QSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEK-SPLKPDQKMFHMMIYMYKK 216
G +TY ++ F K KEA + LL+E + P+ +++++ K
Sbjct: 226 TVKGISADVVTYSTLIYGFCIEGKLKEA----IGLLNEMVLKTINPNVYTYNILVDALCK 281
Query: 217 AGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSK---IYDQMQRAGLQPDVVS 273
G ++A+ + A+M + V+ +TY++LM EV K +++ M G+ PDV +
Sbjct: 282 EGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHT 341
Query: 274 YALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMR 333
Y +LIN + K + +EAL +F+EM + P Y+ L+D SG + + M
Sbjct: 342 YTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRIPYVWDLIDEMH 401
Query: 334 RDRCSP-DICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNL 392
DR P ++ +Y++++ ++ A F ++K G PN T+ L+ G K L
Sbjct: 402 -DRGQPANVITYSSLIDGLCKNGHLDRAIALFNKMKDQGIRPNTFTFTILLDGLCKGGRL 460
Query: 393 EKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNIL 452
+ E++ + G N + ++D + K + A+ +ME G PD I+
Sbjct: 461 KDAQEVFQDLLTKGYHLNVYTYNVMIDGHCKQGLLEEALTMLSKMEDNGCIPDAVTFEII 520
Query: 453 LSLAKTADE 461
+ DE
Sbjct: 521 IIALFKKDE 529
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 78/344 (22%), Positives = 140/344 (40%), Gaps = 6/344 (1%)
Query: 149 NAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFH 208
+A + F RM P + + IL F + + A + L E ++PD +
Sbjct: 42 DAVSQFNRMLCMRHTPPIIQFNKILDSFAKMKHYSTAVSLSHRL---ELKGIQPDLITLN 98
Query: 209 MMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSL---MSFETNYKEVSKIYDQMQRA 265
++I + G + A + +RG TVT N+L + + K+ +D++
Sbjct: 99 ILINCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQ 158
Query: 266 GLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQA 325
G Q + VSY LIN K A+ + +++ +P Y+ ++DA +V +A
Sbjct: 159 GFQLNQVSYGTLINGVCKIGDTRAAIKLLQKIDGRLTKPNVVMYSTIIDALCKYQLVSEA 218
Query: 326 RTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKG 385
+F M S D+ +Y+T++ + ++ A + PNV TY L+
Sbjct: 219 YGLFSEMTVKGISADVVTYSTLIYGFCIEGKLKEAIGLLNEMVLKTINPNVYTYNILVDA 278
Query: 386 YAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPD 445
K +++ + M +KP+ ++T+MD Y + A + M G PD
Sbjct: 279 LCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPD 338
Query: 446 QKAKNILLSLAKTADERNEANELLGNFNHPNNEPGINGLSISVD 489
IL++ +EA L + N PGI S +D
Sbjct: 339 VHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLID 382
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 60/255 (23%), Positives = 113/255 (44%), Gaps = 5/255 (1%)
Query: 220 YEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVS---KIYDQMQRAGLQPDVVSYAL 276
Y A L + +G+Q T N L++ + +++ I ++ + G PD +++
Sbjct: 942 YSTAVSLSHRLELKGIQPDLFTLNILINCFCHMGQITFNFSILAKILKRGYHPDTITFTT 1001
Query: 277 LINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDR 336
LIN + +AL +++L G + +Y L++ G A + + +
Sbjct: 1002 LINGLCLKGQVNKALHFHDKLLAQGFQLNQVSYGTLINGVCKIGDTRAAIKLLRKIDGRL 1061
Query: 337 CSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMM 396
PD+ Y T++ A + A F + G +V+TY TLI G+ V L++ +
Sbjct: 1062 TKPDVVMYNTIIDALCKHQLVSKAYGLFFEMNVKGISADVVTYNTLIYGFCIVGKLKEAI 1121
Query: 397 EIYDKMRVNGIKPNQTIFTTIMDAYGK-NKD-FDSAVVWYKEMESCGFPPDQKAKNILLS 454
+ +KM + I PN + ++DA K KD D ++ +ME G + I++S
Sbjct: 1122 GLLNKMVLKTINPNVRTYNILVDALCKEGKDLLDESLSMLSKMEDNGCKANAVTFEIIIS 1181
Query: 455 LAKTADERNEANELL 469
DE ++ +LL
Sbjct: 1182 ALFEKDENDKVEKLL 1196
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/252 (23%), Positives = 107/252 (42%), Gaps = 5/252 (1%)
Query: 196 EKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEV 255
E ++PD +++I + G + A + +RG T+T+ +L++ +V
Sbjct: 953 ELKGIQPDLFTLNILINCFCHMGQITFNFSILAKILKRGYHPDTITFTTLINGLCLKGQV 1012
Query: 256 SK---IYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNIL 312
+K +D++ G Q + VSY LIN K A+ + ++ +P YN +
Sbjct: 1013 NKALHFHDKLLAQGFQLNQVSYGTLINGVCKIGDTRAAIKLLRKIDGRLTKPDVVMYNTI 1072
Query: 313 LDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGF 372
+DA +V +A +F M S D+ +Y T++ + ++ A ++
Sbjct: 1073 IDALCKHQLVSKAYGLFFEMNVKGISADVVTYNTLIYGFCIVGKLKEAIGLLNKMVLKTI 1132
Query: 373 VPNVITYGTLIKGYAKVNN--LEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSA 430
PNV TY L+ K L++ + + KM NG K N F I+ A + + D
Sbjct: 1133 NPNVRTYNILVDALCKEGKDLLDESLSMLSKMEDNGCKANAVTFEIIISALFEKDENDKV 1192
Query: 431 VVWYKEMESCGF 442
EM + G
Sbjct: 1193 EKLLHEMIARGL 1204
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 47/189 (24%), Positives = 82/189 (43%)
Query: 301 GVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGA 360
G++P NIL++ F G + ++ + + PD ++TT+++ + A
Sbjct: 956 GIQPDLFTLNILINCFCHMGQITFNFSILAKILKRGYHPDTITFTTLINGLCLKGQVNKA 1015
Query: 361 EKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDA 420
F +L GF N ++YGTLI G K+ + +++ K+ KP+ ++ TI+DA
Sbjct: 1016 LHFHDKLLAQGFQLNQVSYGTLINGVCKIGDTRAAIKLLRKIDGRLTKPDVVMYNTIIDA 1075
Query: 421 YGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPG 480
K++ A + EM G D N L+ + EA LL P
Sbjct: 1076 LCKHQLVSKAYGLFFEMNVKGISADVVTYNTLIYGFCIVGKLKEAIGLLNKMVLKTINPN 1135
Query: 481 INGLSISVD 489
+ +I VD
Sbjct: 1136 VRTYNILVD 1144
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 48/221 (21%), Positives = 100/221 (45%), Gaps = 8/221 (3%)
Query: 101 MLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSS 160
+LI + G +L+ + K+GY P ++ T L+ G+ A ++ +
Sbjct: 966 ILINCFCHMGQITFNFSILAKILKRGYHPDTITFTTLINGLCLKGQVNKALHFHDKLLAQ 1025
Query: 161 GPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGY 220
G + + ++Y ++ + + A ++ + + KPD M++ +I K
Sbjct: 1026 GFQLNQVSYGTLINGVCKIGDTRAAIKLLRKI---DGRLTKPDVVMYNTIIDALCKHQLV 1082
Query: 221 EKARKLFALMAERGVQQSTVTYNSLM---SFETNYKEVSKIYDQMQRAGLQPDVVSYALL 277
KA LF M +G+ VTYN+L+ KE + ++M + P+V +Y +L
Sbjct: 1083 SKAYGLFFEMNVKGISADVVTYNTLIYGFCIVGKLKEAIGLLNKMVLKTINPNVRTYNIL 1142
Query: 278 INAYGKARRE--EEALAVFEEMLDAGVRPTHKAYNILLDAF 316
++A K ++ +E+L++ +M D G + + I++ A
Sbjct: 1143 VDALCKEGKDLLDESLSMLSKMEDNGCKANAVTFEIIISAL 1183
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 31/151 (20%), Positives = 71/151 (47%)
Query: 288 EEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTM 347
++A++ F ML P +N +LD+FA A ++ + PD+ + +
Sbjct: 41 DDAVSQFNRMLCMRHTPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITLNIL 100
Query: 348 LSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGI 407
++ + + + ++ + G+ P+ +T TLIKG ++K + +DK+ G
Sbjct: 101 INCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGF 160
Query: 408 KPNQTIFTTIMDAYGKNKDFDSAVVWYKEME 438
+ NQ + T+++ K D +A+ ++++
Sbjct: 161 QLNQVSYGTLINGVCKIGDTRAAIKLLQKID 191
Score = 47.4 bits (111), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 39/181 (21%), Positives = 83/181 (45%), Gaps = 8/181 (4%)
Query: 92 WDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAE 151
+ N++ + LI K GD A K+L ++ + P VV + +++A + A
Sbjct: 1027 FQLNQVSYGTLINGVCKIGDTRAAIKLLRKIDGRLTKPDVVMYNTIIDALCKHQLVSKAY 1086
Query: 152 AIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMI 211
+F M G +TY ++ F K KEA + ++ + + P+ + +++++
Sbjct: 1087 GLFFEMNVKGISADVVTYNTLIYGFCIVGKLKEAIGLLNKMVLKT---INPNVRTYNILV 1143
Query: 212 YMYKKAGG--YEKARKLFALMAERGVQQSTVTYNSLMS--FETNYKE-VSKIYDQMQRAG 266
K G +++ + + M + G + + VT+ ++S FE + + V K+ +M G
Sbjct: 1144 DALCKEGKDLLDESLSMLSKMEDNGCKANAVTFEIIISALFEKDENDKVEKLLHEMIARG 1203
Query: 267 L 267
L
Sbjct: 1204 L 1204
>gi|326506436|dbj|BAJ86536.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 616
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 89/394 (22%), Positives = 185/394 (46%), Gaps = 16/394 (4%)
Query: 82 VLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAY 141
VL+ L + WD +++ LM+ + + + LS M + G P + + +++
Sbjct: 219 VLKGLCMAKRWD--DVEELMV--------EMVRVHEALSQMPEHGCTPDLRMYATIIDGI 268
Query: 142 GRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLK 201
+ G ++ A I RM S G +P+ + Y +LK A +++EAE++ + E+ PL
Sbjct: 269 CKDGHHEVANDILSRMPSYGLKPNVVCYNTVLKGLCSAERWEEAEDLLAEMFQED-CPL- 326
Query: 202 PDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSF---ETNYKEVSKI 258
D F++++ + + G ++ +L M E G +TY ++++ E E +
Sbjct: 327 -DDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCIPDVITYTTVINGFCKEGLVDEAVML 385
Query: 259 YDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAI 318
M G +P+ +SY +++ +A R +A + M+ G P +N L++
Sbjct: 386 LKNMSACGCKPNTISYTIVLKGLCRAERWVDAQELISHMIQQGCLPNPVTFNTLINFMCK 445
Query: 319 SGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVIT 378
G+ +QA + K M + CSPD+ SY+T++ A E A + + G PN I
Sbjct: 446 KGLAEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMINKGITPNTII 505
Query: 379 YGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEME 438
Y ++ ++ +K+++++D ++ ++ + ++ ++ + K + D A+ ++ M
Sbjct: 506 YSSMASALSREGRTDKIIQMFDSIQDATVRSDAALYNAVISSLCKRWETDRAIDFFAYMV 565
Query: 439 SCGFPPDQKAKNILLSLAKTADERNEANELLGNF 472
S G P++ IL+ + EA +LL
Sbjct: 566 SNGCMPNESTYTILIRGLASEGLVREAQDLLSEL 599
Score = 128 bits (322), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 85/355 (23%), Positives = 163/355 (45%), Gaps = 10/355 (2%)
Query: 101 MLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSS 160
+++ A + G F A + L ++ KG + ++ A G + R++ S
Sbjct: 148 VILEAACRGGGFRSAVRALQVLHAKGCTLDSGNCNLVVSAICEQGCVDEGVELLRKLPSF 207
Query: 161 GPRPSALTYQIILKLFVEANKFKEAEEVF--MTLLDEEKSPL-----KPDQKMFHMMIYM 213
G P ++Y +LK A ++ + EE+ M + E S + PD +M+ +I
Sbjct: 208 GCEPDIVSYNAVLKGLCMAKRWDDVEELMVEMVRVHEALSQMPEHGCTPDLRMYATIIDG 267
Query: 214 YKKAGGYEKARKLFALMAERGVQQSTVTYNSL---MSFETNYKEVSKIYDQMQRAGLQPD 270
K G +E A + + M G++ + V YN++ + ++E + +M + D
Sbjct: 268 ICKDGHHEVANDILSRMPSYGLKPNVVCYNTVLKGLCSAERWEEAEDLLAEMFQEDCPLD 327
Query: 271 VVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFK 330
V++ +L++ + + + + + E+ML+ G P Y +++ F G+VD+A + K
Sbjct: 328 DVTFNILVDFFCQNGLVDRVIELLEQMLEHGCIPDVITYTTVINGFCKEGLVDEAVMLLK 387
Query: 331 CMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVN 390
M C P+ SYT +L A A++ + Q G +PN +T+ TLI K
Sbjct: 388 NMSACGCKPNTISYTIVLKGLCRAERWVDAQELISHMIQQGCLPNPVTFNTLINFMCKKG 447
Query: 391 NLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPD 445
E+ +E+ +M VNG P+ ++T++D GK + A+ M + G P+
Sbjct: 448 LAEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMINKGITPN 502
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 91/438 (20%), Positives = 167/438 (38%), Gaps = 66/438 (15%)
Query: 103 ITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGP 162
+ A G+ D +A ++ G A VV++ A++ Y R G+ A + +
Sbjct: 54 LCAAGRTADAARA------LDTAGDAAGVVAYNAMIAGYCRAGQVAAARRLAAAVPVP-- 105
Query: 163 RPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLK---PDQKMFHMMIYMYKKAGG 219
P+A TY I++ +A +T+LDE PL+ M H+++ + GG
Sbjct: 106 -PNAYTYFPIVRSLCARGLIADA----LTVLDE--MPLRGCAATPPMCHVILEAACRGGG 158
Query: 220 YEKARKLFALMAERGVQQSTVTYNSLMSF---ETNYKEVSKIYDQMQRAGLQPDVVSYAL 276
+ A + ++ +G + N ++S + E ++ ++ G +PD+VSY
Sbjct: 159 FRSAVRALQVLHAKGCTLDSGNCNLVVSAICEQGCVDEGVELLRKLPSFGCEPDIVSYNA 218
Query: 277 LINAYGKARR--EEEALAV--------FEEMLDAGVRPTHKAYNILLDAFAISGMVDQAR 326
++ A+R + E L V +M + G P + Y ++D G + A
Sbjct: 219 VLKGLCMAKRWDDVEELMVEMVRVHEALSQMPEHGCTPDLRMYATIIDGICKDGHHEVAN 278
Query: 327 TVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQD---------------- 370
+ M P++ Y T+L +A E AE + Q+
Sbjct: 279 DILSRMPSYGLKPNVVCYNTVLKGLCSAERWEEAEDLLAEMFQEDCPLDDVTFNILVDFF 338
Query: 371 -------------------GFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQ 411
G +P+VITY T+I G+ K +++ + + M G KPN
Sbjct: 339 CQNGLVDRVIELLEQMLEHGCIPDVITYTTVINGFCKEGLVDEAVMLLKNMSACGCKPNT 398
Query: 412 TIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGN 471
+T ++ + + + A M G P+ N L++ +A ELL
Sbjct: 399 ISYTIVLKGLCRAERWVDAQELISHMIQQGCLPNPVTFNTLINFMCKKGLAEQAIELLKQ 458
Query: 472 FNHPNNEPGINGLSISVD 489
P + S +D
Sbjct: 459 MLVNGCSPDLISYSTVID 476
>gi|302821471|ref|XP_002992398.1| hypothetical protein SELMODRAFT_135281 [Selaginella moellendorffii]
gi|300139814|gb|EFJ06548.1| hypothetical protein SELMODRAFT_135281 [Selaginella moellendorffii]
Length = 698
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 94/379 (24%), Positives = 184/379 (48%), Gaps = 21/379 (5%)
Query: 63 VLGTLVRLKQLKKWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFM 122
+LG R QL++ + V +L + N++ + +LI AY + G ++ E + M
Sbjct: 323 LLGGYSRKGQLQQIDTVKTLLR----DTGMSINKITYCLLIDAYARAGLMDRLEALYQEM 378
Query: 123 NKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKF 182
P+ + ++ Y G+++ + R MQ +G P A Y +I+ F +
Sbjct: 379 RDCDIRPNTYMYARMITIYRDTGQWQKGVKLLREMQQAGVTPDAHVYNVIINTFGRTRQL 438
Query: 183 KEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTY 242
++A F + D ++PD ++ +I KAG +ARKL+ M G + T+
Sbjct: 439 EQARIAFFKMQD---GGIEPDVVSWNSLIDACCKAGQPLEARKLYYKMVNDGCAPTAQTF 495
Query: 243 NSLMSFETNYK---EVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLD 299
N ++ +K +V+++ ++M+ G+ P+VV+Y L++ Y +AR ++A+ + M +
Sbjct: 496 NIVIHGLGEHKRWNDVNEMVEEMRSKGMFPNVVTYTTLVDVYAQARLFQDAVECLQTMKE 555
Query: 300 AGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEG 359
G+ P+ AY+ L +A+A GM +Q V + M ++ ++ +++A+ A +
Sbjct: 556 DGMGPSPTAYSALANAYAQLGMCEQTLHVLQTMEKENIEINLAMLNLLINAFSMAGRSQE 615
Query: 360 AEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMD 419
A F +K+ G + ITY TL+K + L+++ ++D+M G +P+
Sbjct: 616 AFAVFEYIKEAGLTADKITYTTLMKALIRAEKLDEVSGVFDEMIKAGCRPD--------- 666
Query: 420 AYGKNKDFDSAVVWYKEME 438
GK KD + +KE E
Sbjct: 667 --GKAKDMLRSAFRFKERE 683
Score = 138 bits (347), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 86/371 (23%), Positives = 178/371 (47%), Gaps = 6/371 (1%)
Query: 99 FLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQ 158
++ L+ + GK G +AE +L M G P++ ++ L+ Y R G+ + + + ++
Sbjct: 285 YISLMLSLGKHGRTAEAEALLEEMKWYGLRPNLKAYNTLLGGYSRKGQLQQIDTVKTLLR 344
Query: 159 SSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAG 218
+G + +TY +++ + A E ++ + D ++P+ M+ MI +Y+ G
Sbjct: 345 DTGMSINKITYCLLIDAYARAGLMDRLEALYQEMRD---CDIRPNTYMYARMITIYRDTG 401
Query: 219 GYEKARKLFALMAERGVQQSTVTYNSLMSF--ETNYKEVSKI-YDQMQRAGLQPDVVSYA 275
++K KL M + GV YN +++ T E ++I + +MQ G++PDVVS+
Sbjct: 402 QWQKGVKLLREMQQAGVTPDAHVYNVIINTFGRTRQLEQARIAFFKMQDGGIEPDVVSWN 461
Query: 276 LLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRD 335
LI+A KA + EA ++ +M++ G PT + +NI++ + + + MR
Sbjct: 462 SLIDACCKAGQPLEARKLYYKMVNDGCAPTAQTFNIVIHGLGEHKRWNDVNEMVEEMRSK 521
Query: 336 RCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKM 395
P++ +YTT++ Y A + A + + +K+DG P+ Y L YA++ E+
Sbjct: 522 GMFPNVVTYTTLVDVYAQARLFQDAVECLQTMKEDGMGPSPTAYSALANAYAQLGMCEQT 581
Query: 396 MEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSL 455
+ + M I+ N + +++A+ A ++ ++ G D+ L+
Sbjct: 582 LHVLQTMEKENIEINLAMLNLLINAFSMAGRSQEAFAVFEYIKEAGLTADKITYTTLMKA 641
Query: 456 AKTADERNEAN 466
A++ +E +
Sbjct: 642 LIRAEKLDEVS 652
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 87/367 (23%), Positives = 172/367 (46%), Gaps = 6/367 (1%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
LI A G+ N+ L + G S+ +LM + G+ GR AEA+ M+ G
Sbjct: 253 LIFACGQAHKPNEGMFFLEKLQASGLVADRDSYISLMLSLGKHGRTAEAEALLEEMKWYG 312
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
RP+ Y +L + + ++ + V L D + + ++ + ++I Y +AG +
Sbjct: 313 LRPNLKAYNTLLGGYSRKGQLQQIDTVKTLLRD---TGMSINKITYCLLIDAYARAGLMD 369
Query: 222 KARKLFALMAERGVQQSTVTYNSLMSF---ETNYKEVSKIYDQMQRAGLQPDVVSYALLI 278
+ L+ M + ++ +T Y +++ +++ K+ +MQ+AG+ PD Y ++I
Sbjct: 370 RLEALYQEMRDCDIRPNTYMYARMITIYRDTGQWQKGVKLLREMQQAGVTPDAHVYNVII 429
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCS 338
N +G+ R+ E+A F +M D G+ P ++N L+DA +G +AR ++ M D C+
Sbjct: 430 NTFGRTRQLEQARIAFFKMQDGGIEPDVVSWNSLIDACCKAGQPLEARKLYYKMVNDGCA 489
Query: 339 PDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEI 398
P ++ ++ + ++ G PNV+TY TL+ YA+ + +E
Sbjct: 490 PTAQTFNIVIHGLGEHKRWNDVNEMVEEMRSKGMFPNVVTYTTLVDVYAQARLFQDAVEC 549
Query: 399 YDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKT 458
M+ +G+ P+ T ++ + +AY + + + + ME + N+L++
Sbjct: 550 LQTMKEDGMGPSPTAYSALANAYAQLGMCEQTLHVLQTMEKENIEINLAMLNLLINAFSM 609
Query: 459 ADERNEA 465
A EA
Sbjct: 610 AGRSQEA 616
Score = 125 bits (313), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 95/391 (24%), Positives = 174/391 (44%), Gaps = 44/391 (11%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGR-YKNAEAIFRRMQSS 160
L+ AY + D+ KA + LS M G+ P VVS+T +++A G +F+ MQ+
Sbjct: 182 LVGAYAQNRDYGKALETLSKMKTLGFPPDVVSYTHVIQACRHGVVDIYTGFRLFQEMQAE 241
Query: 161 GPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDE-EKSPLKPDQKMFHMMIYMYKKAGG 219
G + Y ++ +A+K E M L++ + S L D+ + ++ K G
Sbjct: 242 GVQVDGKVYNDLIFACGQAHKPNEG----MFFLEKLQASGLVADRDSYISLMLSLGKHGR 297
Query: 220 YEKARKLFALMAERGVQQSTVTYNSLM---SFETNYKEVSKIYDQMQRAGLQPDVVSYAL 276
+A L M G++ + YN+L+ S + +++ + ++ G+ + ++Y L
Sbjct: 298 TAEAEALLEEMKWYGLRPNLKAYNTLLGGYSRKGQLQQIDTVKTLLRDTGMSINKITYCL 357
Query: 277 LINAYGKARREEEALAVFEEMLD-----------------------------------AG 301
LI+AY +A + A+++EM D AG
Sbjct: 358 LIDAYARAGLMDRLEALYQEMRDCDIRPNTYMYARMITIYRDTGQWQKGVKLLREMQQAG 417
Query: 302 VRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAE 361
V P YN++++ F + ++QAR F M+ PD+ S+ +++ A A A
Sbjct: 418 VTPDAHVYNVIINTFGRTRQLEQARIAFFKMQDGGIEPDVVSWNSLIDACCKAGQPLEAR 477
Query: 362 KFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAY 421
K + ++ DG P T+ +I G + + E+ ++MR G+ PN +TT++D Y
Sbjct: 478 KLYYKMVNDGCAPTAQTFNIVIHGLGEHKRWNDVNEMVEEMRSKGMFPNVVTYTTLVDVY 537
Query: 422 GKNKDFDSAVVWYKEMESCGFPPDQKAKNIL 452
+ + F AV + M+ G P A + L
Sbjct: 538 AQARLFQDAVECLQTMKEDGMGPSPTAYSAL 568
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 115/472 (24%), Positives = 205/472 (43%), Gaps = 59/472 (12%)
Query: 27 GKKNWRRLMNQIEE---VGSAVAVLRSERTRGQPLPKDLVLGTLVRLKQLKKWNVVSEVL 83
G W+ L+ +E +G AV E+ R +P+ L L + + SE+L
Sbjct: 77 GGLPWKALLGSLERENAIGEKFAV---EQFR--KVPERAWHWLLQELCVSGRSSFASELL 131
Query: 84 EWLRIQSWWDFNEMDFLMLITAYGKQGDFNKA----EKVLSFMNKKGYAPSVVSHTALME 139
EWLR S+ ++ ++I YG++ +KA EK+ S + ++GY AL+
Sbjct: 132 EWLRENSFCRTYDVLDSVVIHGYGRERKLHKALEVAEKLGSNLQRRGY-------NALVG 184
Query: 140 AYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSP 199
AY + Y A +M++ G P ++Y ++
Sbjct: 185 AYAQNRDYGKALETLSKMKTLGFPPDVVSYTHVI-------------------------- 218
Query: 200 LKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLM-SFETNYKEVSKI 258
Q H ++ +Y G+ +LF M GVQ YN L+ + +K +
Sbjct: 219 ----QACRHGVVDIYT---GF----RLFQEMQAEGVQVDGKVYNDLIFACGQAHKPNEGM 267
Query: 259 Y--DQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAF 316
+ +++Q +GL D SY L+ + GK R EA A+ EEM G+RP KAYN LL +
Sbjct: 268 FFLEKLQASGLVADRDSYISLMLSLGKHGRTAEAEALLEEMKWYGLRPNLKAYNTLLGGY 327
Query: 317 AISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNV 376
+ G + Q TV +R S + +Y ++ AY A M+ E ++ ++ PN
Sbjct: 328 SRKGQLQQIDTVKTLLRDTGMSINKITYCLLIDAYARAGLMDRLEALYQEMRDCDIRPNT 387
Query: 377 ITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKE 436
Y +I Y +K +++ +M+ G+ P+ ++ I++ +G+ + + A + + +
Sbjct: 388 YMYARMITIYRDTGQWQKGVKLLREMQQAGVTPDAHVYNVIINTFGRTRQLEQARIAFFK 447
Query: 437 MESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGINGLSISV 488
M+ G PD + N L+ A + EA +L + P +I +
Sbjct: 448 MQDGGIEPDVVSWNSLIDACCKAGQPLEARKLYYKMVNDGCAPTAQTFNIVI 499
>gi|242065566|ref|XP_002454072.1| hypothetical protein SORBIDRAFT_04g024190 [Sorghum bicolor]
gi|241933903|gb|EES07048.1| hypothetical protein SORBIDRAFT_04g024190 [Sorghum bicolor]
Length = 820
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 95/365 (26%), Positives = 163/365 (44%), Gaps = 11/365 (3%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
LI A ++ D A++ LS M + G+ P + +L+ Y R + A+ +F +M G
Sbjct: 135 LIRALCRRADLRHAQRYLSLMVRSGWRPDAFTFNSLILGYCRTQQLDVAQDLFDKMPLRG 194
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
A++Y +++ F E + EA E+F L +PD ++ A E
Sbjct: 195 FSQDAVSYAALIEGFCETGRVDEALELFRELE-------QPDMYTHAALVKGLCDARRGE 247
Query: 222 KARKLFALMAERGVQQSTVTYNSLMSF---ETNYKEVSKIYDQMQRAGLQPDVVSYALLI 278
+ + M E G + +T Y +L+ E +E K+ ++M GL P V+ ++
Sbjct: 248 EGLYMLQKMKELGWRPATRAYAALVDLWCREQKAEEAEKMLNEMFDNGLVPCAVTCTAVV 307
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCS 338
NAY + R A+ VFE M G P YN ++ F G V +A + MR
Sbjct: 308 NAYCREGRMSGAVRVFESMKLKGCEPNVWTYNAMVQGFCNVGKVYKAMALLDQMRECGVE 367
Query: 339 PDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEI 398
PD+ +Y ++ +E A + R ++ +G + TY LI K +++ +
Sbjct: 368 PDVVTYNLLIRGQCIDGHIESAFRLLRLMEGNGLAADQYTYNVLIDALCKTGKVDEACSL 427
Query: 399 YDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILL-SLAK 457
+D + GI+PN F T+++ K FD A + ++M S G PD + + +L K
Sbjct: 428 FDGLEYRGIRPNSVTFNTVINGLCKGGKFDVACTFLEKMVSAGCAPDTYTYSPFIENLCK 487
Query: 458 TADER 462
T R
Sbjct: 488 TKGSR 492
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 94/394 (23%), Positives = 168/394 (42%), Gaps = 37/394 (9%)
Query: 86 LRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGG 145
L ++S W + F LI Y + + A+ + M +G++ VS+ AL+E + G
Sbjct: 154 LMVRSGWRPDAFTFNSLILGYCRTQQLDVAQDLFDKMPLRGFSQDAVSYAALIEGFCETG 213
Query: 146 RYKNAEAIFR-------------------------------RMQSSGPRPSALTYQIILK 174
R A +FR +M+ G RP+ Y ++
Sbjct: 214 RVDEALELFRELEQPDMYTHAALVKGLCDARRGEEGLYMLQKMKELGWRPATRAYAALVD 273
Query: 175 LFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERG 234
L+ K +EAE++ + D L P ++ Y + G A ++F M +G
Sbjct: 274 LWCREQKAEEAEKMLNEMFDNG---LVPCAVTCTAVVNAYCREGRMSGAVRVFESMKLKG 330
Query: 235 VQQSTVTYNSLMSFETNYKEVSK---IYDQMQRAGLQPDVVSYALLINAYGKARREEEAL 291
+ + TYN+++ N +V K + DQM+ G++PDVV+Y LLI E A
Sbjct: 331 CEPNVWTYNAMVQGFCNVGKVYKAMALLDQMRECGVEPDVVTYNLLIRGQCIDGHIESAF 390
Query: 292 AVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAY 351
+ M G+ YN+L+DA +G VD+A ++F + P+ ++ T+++
Sbjct: 391 RLLRLMEGNGLAADQYTYNVLIDALCKTGKVDEACSLFDGLEYRGIRPNSVTFNTVINGL 450
Query: 352 VNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQ 411
+ A F ++ G P+ TY I+ K + + D+M +KP+
Sbjct: 451 CKGGKFDVACTFLEKMVSAGCAPDTYTYSPFIENLCKTKGSREGLSFIDEMLQKDVKPST 510
Query: 412 TIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPD 445
+T ++D K +++ A + +M S G PD
Sbjct: 511 VNYTIVIDRLFKERNYGLATRIWGQMVSLGCSPD 544
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 92/344 (26%), Positives = 162/344 (47%), Gaps = 18/344 (5%)
Query: 153 IFRRMQSSGP-RPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMI 211
+F M GP P+ TY +++ + A+ +++L+ +S +PD F+ +I
Sbjct: 115 LFAHMYHHGPPAPTGATYNALIRALCRRADLRHAQR-YLSLM--VRSGWRPDAFTFNSLI 171
Query: 212 YMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSKIYDQMQ--RAGLQP 269
Y + + A+ LF M RG Q V+Y +L+ + E ++ + ++ R QP
Sbjct: 172 LGYCRTQQLDVAQDLFDKMPLRGFSQDAVSYAALIE---GFCETGRVDEALELFRELEQP 228
Query: 270 DVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVF 329
D+ ++A L+ ARR EE L + ++M + G RP +AY L+D + ++A +
Sbjct: 229 DMYTHAALVKGLCDARRGEEGLYMLQKMKELGWRPATRAYAALVDLWCREQKAEEAEKML 288
Query: 330 KCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKV 389
M + P + T +++AY M GA + F +K G PNV TY +++G+ V
Sbjct: 289 NEMFDNGLVPCAVTCTAVVNAYCREGRMSGAVRVFESMKLKGCEPNVWTYNAMVQGFCNV 348
Query: 390 NNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAK 449
+ K M + D+MR G++P+ + ++ + +SA + ME G DQ
Sbjct: 349 GKVYKAMALLDQMRECGVEPDVVTYNLLIRGQCIDGHIESAFRLLRLMEGNGLAADQYTY 408
Query: 450 NILL-SLAKTADERNEANELLGNFNHPNNEPG-------INGLS 485
N+L+ +L KT + +EA L + P INGL
Sbjct: 409 NVLIDALCKTG-KVDEACSLFDGLEYRGIRPNSVTFNTVINGLC 451
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 91/392 (23%), Positives = 166/392 (42%), Gaps = 30/392 (7%)
Query: 101 MLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSS 160
+LI G A ++L M G A ++ L++A + G+ A ++F ++
Sbjct: 375 LLIRGQCIDGHIESAFRLLRLMEGNGLAADQYTYNVLIDALCKTGKVDEACSLFDGLEYR 434
Query: 161 GPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSP-LKPDQKMFHMMIYMYKKAGG 219
G RP+++T+ ++ + KF +V T L++ S PD + I K G
Sbjct: 435 GIRPNSVTFNTVINGLCKGGKF----DVACTFLEKMVSAGCAPDTYTYSPFIENLCKTKG 490
Query: 220 YEKARKLFALMAERGVQQSTVTYNSLMSF---ETNYKEVSKIYDQMQRAGLQPDVVSYAL 276
+ M ++ V+ STV Y ++ E NY ++I+ QM G PDVV+Y
Sbjct: 491 SREGLSFIDEMLQKDVKPSTVNYTIVIDRLFKERNYGLATRIWGQMVSLGCSPDVVTYTT 550
Query: 277 LINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDR 336
+ AY R EA V EM G+ AYN L+D G D A T+ K M
Sbjct: 551 SVRAYCNEGRLHEAENVVMEMKKGGIIVDAMAYNTLIDGHTSIGKTDHAVTILKHMTGVA 610
Query: 337 CSP-------------------DICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVI 377
P D+ TT + + +D+ + F +K++ +
Sbjct: 611 SMPNHFTFFILLRHLLQRRLAEDVPLKTTSVWKTIELADV---FELFELMKKNSVPSSAR 667
Query: 378 TYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEM 437
Y +++G+++ L+++ + M+ + + N+ I+T++++ + K + + A M
Sbjct: 668 AYLAILEGFSEERRLDEVTSLVSHMKEDDLPLNEDIYTSLVNCFCKLRMYPDAWALLCSM 727
Query: 438 ESCGFPPDQKAKNILLSLAKTADERNEANELL 469
GF P+ + LLS + + A E+
Sbjct: 728 IGHGFLPNLISYQYLLSGFTAEGQADRAKEIF 759
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 67/375 (17%), Positives = 143/375 (38%), Gaps = 59/375 (15%)
Query: 101 MLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSS 160
+LI A K G ++A + + +G P+ V+ ++ +GG++ A +M S+
Sbjct: 410 VLIDALCKTGKVDEACSLFDGLEYRGIRPNSVTFNTVINGLCKGGKFDVACTFLEKMVSA 469
Query: 161 GPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEE-KSPLKPDQKMFHMMIYMYKKAGG 219
G P TY ++ + +E ++ +DE + +KP + ++I K
Sbjct: 470 GCAPDTYTYSPFIENLCKTKGSREG----LSFIDEMLQKDVKPSTVNYTIVIDRLFKERN 525
Query: 220 YEKARKLFALMAERGVQQSTVTYNSLMSFETN---YKEVSKIYDQMQRAGLQPDVVSYAL 276
Y A +++ M G VTY + + N E + +M++ G+ D ++Y
Sbjct: 526 YGLATRIWGQMVSLGCSPDVVTYTTSVRAYCNEGRLHEAENVVMEMKKGGIIVDAMAYNT 585
Query: 277 LINAYGKARREEEALAVFEEMLDAGVRPTH------------------------------ 306
LI+ + + + A+ + + M P H
Sbjct: 586 LIDGHTSIGKTDHAVTILKHMTGVASMPNHFTFFILLRHLLQRRLAEDVPLKTTSVWKTI 645
Query: 307 ---------------------KAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYT 345
+AY +L+ F+ +D+ ++ M+ D + YT
Sbjct: 646 ELADVFELFELMKKNSVPSSARAYLAILEGFSEERRLDEVTSLVSHMKEDDLPLNEDIYT 705
Query: 346 TMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVN 405
++++ + A + GF+PN+I+Y L+ G+ ++ EI+ +R
Sbjct: 706 SLVNCFCKLRMYPDAWALLCSMIGHGFLPNLISYQYLLSGFTAEGQADRAKEIFRGLRWK 765
Query: 406 GIKPNQTIFTTIMDA 420
++ ++ I+D
Sbjct: 766 EYNTDEIVWKIIIDG 780
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 63/307 (20%), Positives = 118/307 (38%), Gaps = 22/307 (7%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
+ +++ ++I K+ ++ A ++ M G +P VV++T + AY GR AE +
Sbjct: 509 STVNYTIVIDRLFKERNYGLATRIWGQMVSLGCSPDVVTYTTSVRAYCNEGRLHEAENVV 568
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
M+ G A+ Y ++ K A + + P+ F +++
Sbjct: 569 MEMKKGGIIVDAMAYNTLIDGHTSIGKTDHAVTILKHMTGVAS---MPNHFTFFILLRHL 625
Query: 215 KKAGGYEKAR----------------KLFALMAERGVQQSTVTYNSLM---SFETNYKEV 255
+ E +LF LM + V S Y +++ S E EV
Sbjct: 626 LQRRLAEDVPLKTTSVWKTIELADVFELFELMKKNSVPSSARAYLAILEGFSEERRLDEV 685
Query: 256 SKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDA 315
+ + M+ L + Y L+N + K R +A A+ M+ G P +Y LL
Sbjct: 686 TSLVSHMKEDDLPLNEDIYTSLVNCFCKLRMYPDAWALLCSMIGHGFLPNLISYQYLLSG 745
Query: 316 FAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPN 375
F G D+A+ +F+ +R + D + ++ + + L+Q P+
Sbjct: 746 FTAEGQADRAKEIFRGLRWKEYNTDEIVWKIIIDGLIRQGHPDMCHDMISILEQMKCKPS 805
Query: 376 VITYGTL 382
TY L
Sbjct: 806 DETYAML 812
>gi|222636757|gb|EEE66889.1| hypothetical protein OsJ_23712 [Oryza sativa Japonica Group]
Length = 579
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 78/329 (23%), Positives = 162/329 (49%), Gaps = 6/329 (1%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + + LI + G K+ + ++G P + M+ + G + IF
Sbjct: 226 NPVVYTSLIRNFFIHGRKEDGHKIFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIF 285
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
++S G P +Y I++ +A + +E +F + ++ D + ++ ++ +
Sbjct: 286 EDIRSYGFLPDVRSYSILIHGLTKAGQARETSNIFHAM---KQQGFALDARAYNAVVDGF 342
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSL---MSFETNYKEVSKIYDQMQRAGLQPDV 271
K+G KA ++ M E+ VQ + TY ++ ++ E ++++ + G++ +V
Sbjct: 343 CKSGKVHKAYEILEEMKEKCVQPTVATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNV 402
Query: 272 VSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKC 331
V Y+ LI+ +GK R +EA + EEM+ G+ P +N LLDA + +++A F+
Sbjct: 403 VLYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLLDALVKAEEINEALVCFQS 462
Query: 332 MRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNN 391
M+ +C P+ +Y+ +++ A F++ +++ G VPNV+TY T+I G AKV N
Sbjct: 463 MKEMKCPPNTYTYSILINGLCRVQKYNKAFVFWQDMQKQGLVPNVVTYTTMISGLAKVGN 522
Query: 392 LEKMMEIYDKMRVNGIKPNQTIFTTIMDA 420
+ ++++ + NG P+ F +++
Sbjct: 523 ITDAYSLFERFKANGGIPDAASFNALIEG 551
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 96/379 (25%), Positives = 172/379 (45%), Gaps = 9/379 (2%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
+++ + +I K G +AE++ + M + P ++ ++ YG GR+++A +
Sbjct: 17 DDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMIMGYGSAGRFEDAYKLL 76
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
R++ G PS +++ IL + K EA ++L + K +P+ ++++I M
Sbjct: 77 ERLRERGCIPSVVSFNSILTCLGKKRKVDEA----LSLFEVMKKDAEPNSSTYNIIIDML 132
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSL---MSFETNYKEVSKIYDQMQRAGLQPDV 271
G E+A ++ M + + +T N + + +E KI++ + G PD
Sbjct: 133 CLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFESASQRGCNPDC 192
Query: 272 VSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKC 331
V+Y LI+ GK + +EA +FE+MLDAG Y L+ F I G + +FK
Sbjct: 193 VTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGRKEDGHKIFKE 252
Query: 332 MRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNN 391
+ R C PD+ T + A ++E F ++ GF+P+V +Y LI G K
Sbjct: 253 LIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSILIHGLTKAGQ 312
Query: 392 LEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEM-ESCGFPPDQKAKN 450
+ I+ M+ G + + ++D + K+ A +EM E C P
Sbjct: 313 ARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTVATYGA 372
Query: 451 ILLSLAKTADERNEANELL 469
I+ LAK D +EA L
Sbjct: 373 IVDGLAKI-DRLDEAYMLF 390
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 99/419 (23%), Positives = 186/419 (44%), Gaps = 8/419 (1%)
Query: 51 ERTRGQPLPKDLVLGTLV-RLKQLKKWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQ 109
E P L + +V RL + +K ++ E Q + + + + LI GK+
Sbjct: 147 EMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFESAS-QRGCNPDCVTYCSLIDGLGKK 205
Query: 110 GDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTY 169
G ++A ++ M G+ + V +T+L+ + GR ++ IF+ + G +P
Sbjct: 206 GQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGRKEDGHKIFKELIRRGCKPDLTLL 265
Query: 170 QIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFAL 229
+ +A E E+ M D PD + + ++I+ KAG + +F
Sbjct: 266 NTYMDCVFKAG---EVEKGRMIFEDIRSYGFLPDVRSYSILIHGLTKAGQARETSNIFHA 322
Query: 230 MAERGVQQSTVTYNSLMSFETNYKEVSKIYD---QMQRAGLQPDVVSYALLINAYGKARR 286
M ++G YN+++ +V K Y+ +M+ +QP V +Y +++ K R
Sbjct: 323 MKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTVATYGAIVDGLAKIDR 382
Query: 287 EEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTT 346
+EA +FEE G+ Y+ L+D F G +D+A + + M + +P++ ++ +
Sbjct: 383 LDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNS 442
Query: 347 MLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNG 406
+L A V A ++ A F+ +K+ PN TY LI G +V K + M+ G
Sbjct: 443 LLDALVKAEEINEALVCFQSMKEMKCPPNTYTYSILINGLCRVQKYNKAFVFWQDMQKQG 502
Query: 407 IKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEA 465
+ PN +TT++ K + A ++ ++ G PD + N L+ A+ EA
Sbjct: 503 LVPNVVTYTTMISGLAKVGNITDAYSLFERFKANGGIPDAASFNALIEGMSNANRAMEA 561
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 104/436 (23%), Positives = 182/436 (41%), Gaps = 75/436 (17%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGR------------------ 143
+I YG G F A K+L + ++G PSVVS +++ G+
Sbjct: 59 MIMGYGSAGRFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLFEVMKKDA 118
Query: 144 ----------------GGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEE 187
GGR + A I M+ + P+ LT I++ +A K +EA +
Sbjct: 119 EPNSSTYNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYK 178
Query: 188 VFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSL-- 245
+F + + PD + +I K G ++A +LF M + G + V Y SL
Sbjct: 179 IFES---ASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIR 235
Query: 246 --------------------------MSFETNYK-------EVSK---IYDQMQRAGLQP 269
++ Y EV K I++ ++ G P
Sbjct: 236 NFFIHGRKEDGHKIFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLP 295
Query: 270 DVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVF 329
DV SY++LI+ KA + E +F M G +AYN ++D F SG V +A +
Sbjct: 296 DVRSYSILIHGLTKAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEIL 355
Query: 330 KCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKV 389
+ M+ P + +Y ++ ++ A F K G NV+ Y +LI G+ KV
Sbjct: 356 EEMKEKCVQPTVATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKV 415
Query: 390 NNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAK 449
+++ I ++M G+ PN + +++DA K ++ + A+V ++ M+ PP+
Sbjct: 416 GRIDEAYLILEEMMKKGLTPNVYTWNSLLDALVKAEEINEALVCFQSMKEMKCPPNTYTY 475
Query: 450 NILLSLAKTADERNEA 465
+IL++ + N+A
Sbjct: 476 SILINGLCRVQKYNKA 491
Score = 125 bits (313), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 78/317 (24%), Positives = 158/317 (49%), Gaps = 8/317 (2%)
Query: 154 FRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYM 213
F +++ G +P ++Y ++ + +A + EAEE+F + E P ++ MI
Sbjct: 6 FHELKAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPC---AYAYNTMIMG 62
Query: 214 YKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSK---IYDQMQRAGLQPD 270
Y AG +E A KL + ERG S V++NS+++ ++V + +++ M++ +P+
Sbjct: 63 YGSAGRFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLFEVMKKDA-EPN 121
Query: 271 VVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFK 330
+Y ++I+ R EEA + +EM A + P NI++D + +++A +F+
Sbjct: 122 SSTYNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFE 181
Query: 331 CMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVN 390
+ C+PD +Y +++ ++ A + F ++ G N + Y +LI+ +
Sbjct: 182 SASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHG 241
Query: 391 NLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKN 450
E +I+ ++ G KP+ T+ T MD K + + + ++++ S GF PD ++ +
Sbjct: 242 RKEDGHKIFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYS 301
Query: 451 ILL-SLAKTADERNEAN 466
IL+ L K R +N
Sbjct: 302 ILIHGLTKAGQARETSN 318
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 84/189 (44%), Gaps = 1/189 (0%)
Query: 257 KIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAF 316
K + +++ GL+PD VSY +I KA R EA +F +M P AYN ++ +
Sbjct: 4 KFFHELKAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMIMGY 63
Query: 317 AISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNV 376
+G + A + + +R C P + S+ ++L+ ++ A F +K+D PN
Sbjct: 64 GSAGRFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLFEVMKKDA-EPNS 122
Query: 377 ITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKE 436
TY +I +E+ I D+M + PN ++D K + + A ++
Sbjct: 123 STYNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFES 182
Query: 437 MESCGFPPD 445
G PD
Sbjct: 183 ASQRGCNPD 191
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 72/167 (43%), Gaps = 3/167 (1%)
Query: 93 DFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEA 152
+ N + + LI +GK G ++A +L M KKG P+V + +L++A + A
Sbjct: 399 ELNVVLYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLLDALVKAEEINEALV 458
Query: 153 IFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIY 212
F+ M+ P+ TY I++ K+ +A F+ D +K L P+ + MI
Sbjct: 459 CFQSMKEMKCPPNTYTYSILINGLCRVQKYNKA---FVFWQDMQKQGLVPNVVTYTTMIS 515
Query: 213 MYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSKIY 259
K G A LF G ++N+L+ +N + Y
Sbjct: 516 GLAKVGNITDAYSLFERFKANGGIPDAASFNALIEGMSNANRAMEAY 562
Score = 47.4 bits (111), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 36/165 (21%), Positives = 59/165 (35%), Gaps = 36/165 (21%)
Query: 360 AEKFFRRLKQDGF-----------------------------------VPNVITYGTLIK 384
A KFF LK G VP Y T+I
Sbjct: 2 AWKFFHELKAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMIM 61
Query: 385 GYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPP 444
GY E ++ +++R G P+ F +I+ GK + D A+ ++ M+ P
Sbjct: 62 GYGSAGRFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLFEVMKK-DAEP 120
Query: 445 DQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGINGLSISVD 489
+ NI++ + EA +L H + P + ++I VD
Sbjct: 121 NSSTYNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVD 165
>gi|8493575|gb|AAF75798.1|AC011000_1 Contains multiple PPR Repeats PF|01535 [Arabidopsis thaliana]
Length = 514
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 97/419 (23%), Positives = 186/419 (44%), Gaps = 22/419 (5%)
Query: 59 PKDLVLGTLVRLKQLKKWNVVSEVLEWLRI--QSWWDFNEMDFLMLITAYGKQGDFNKAE 116
P + GT+V K + VS L LR +S N + + ++ K G+ KA+
Sbjct: 43 PDAVTYGTIVN-GMCKLGDTVS-ALNMLRKMDESQIKANVVIYSAIVDRLCKDGNHIKAQ 100
Query: 117 KVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLF 176
+ + M++KG P+V+++ +++ Y G++ +AE + R M P +T+ ++ F
Sbjct: 101 NIFTEMHEKGIFPNVLTYNCMIDGYCSYGKWSDAEQLLRDMIERNIDPDVVTFSALINAF 160
Query: 177 VEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQ 236
V+ K AEE++ +L + + P + MI + K E A+ +F LM +G
Sbjct: 161 VKEGKVSGAEELYREML---RRNIFPTTITYSSMIDGFCKHSRLEDAKHMFDLMVSKGCS 217
Query: 237 QSTVTYNSLMSFET--------------NYKEVSKIYDQMQRAGLQPDVVSYALLINAYG 282
+T N+L+ N ++ +M G+ PD+V+ L+
Sbjct: 218 PDIITLNTLIDGCCRAKRHLIHGFCQVGNVNVAQDLFQEMISNGVSPDIVTCNTLLAGLC 277
Query: 283 KARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDIC 342
+ + E+AL +F+ + + NI+++ VD+A +F + + D+
Sbjct: 278 ENGKLEKALEMFKVFQKSKMDLDTATCNIIINGMCKGNKVDEAWDLFNSLPVNGVETDVV 337
Query: 343 SYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKM 402
+Y ++ +V + AE + + G +P+ +TY +++ G+ K N LE+ ++ D M
Sbjct: 338 TYNILIGVFVKEGNFLRAEDIYLEMLCKGIIPSTVTYNSMVDGFCKQNRLEEARQMVDSM 397
Query: 403 RVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILL-SLAKTAD 460
G P+ F+T++ Y K D + + EM G D N L+ K D
Sbjct: 398 VSEGCSPDVVTFSTLIKGYCKAGRVDDGLELFSEMCQRGLVADTITYNALIHGFCKVGD 456
Score = 139 bits (349), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 113/513 (22%), Positives = 229/513 (44%), Gaps = 35/513 (6%)
Query: 2 GMLAPRKFMQKRRKVEVFKDAADEAGKKNWRRLMNQIEEVGSAVAVLRSERTRGQP-LPK 60
G+ + +Q V+ + + + ++N + ++G V+ L R + +
Sbjct: 19 GLCREGRVLQALALVDRMVEEGHQPDAVTYGTIVNGMCKLGDTVSALNMLRKMDESQIKA 78
Query: 61 DLVLGTLV--RL----KQLKKWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNK 114
++V+ + + RL +K N+ +E+ E + +N M I Y G ++
Sbjct: 79 NVVIYSAIVDRLCKDGNHIKAQNIFTEMHEKGIFPNVLTYNCM-----IDGYCSYGKWSD 133
Query: 115 AEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILK 174
AE++L M ++ P VV+ +AL+ A+ + G+ AE ++R M P+ +TY ++
Sbjct: 134 AEQLLRDMIERNIDPDVVTFSALINAFVKEGKVSGAEELYREMLRRNIFPTTITYSSMID 193
Query: 175 LFVEANKFKEAEEVFMTLLDEEKSP--------LKPDQKMFHMMIYMYKKAGGYEKARKL 226
F + ++ ++A+ +F ++ + SP + + +I+ + + G A+ L
Sbjct: 194 GFCKHSRLEDAKHMFDLMVSKGCSPDIITLNTLIDGCCRAKRHLIHGFCQVGNVNVAQDL 253
Query: 227 FALMAERGVQQSTVTYNSLMSFETNYKEVSK---IYDQMQRAGLQPDVVSYALLINAYGK 283
F M GV VT N+L++ ++ K ++ Q++ + D + ++IN K
Sbjct: 254 FQEMISNGVSPDIVTCNTLLAGLCENGKLEKALEMFKVFQKSKMDLDTATCNIIINGMCK 313
Query: 284 ARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICS 343
+ +EA +F + GV YNIL+ F G +A ++ M P +
Sbjct: 314 GNKVDEAWDLFNSLPVNGVETDVVTYNILIGVFVKEGNFLRAEDIYLEMLCKGIIPSTVT 373
Query: 344 YTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMR 403
Y +M+ + + +E A + + +G P+V+T+ TLIKGY K ++ +E++ +M
Sbjct: 374 YNSMVDGFCKQNRLEEARQMVDSMVSEGCSPDVVTFSTLIKGYCKAGRVDDGLELFSEMC 433
Query: 404 VNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERN 463
G+ + + ++ + K D + A ++EM S G PD +L+ T E
Sbjct: 434 QRGLVADTITYNALIHGFCKVGDLNGAQDIFEEMVSSGVCPDTITFRSMLAGLCTKAELQ 493
Query: 464 EANELLGNFNHPNNEPGINGLSISVDEEDDDDD 496
+ +L + L SVD E +DD+
Sbjct: 494 KGLTMLED------------LQKSVDHELEDDE 514
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 85/348 (24%), Positives = 158/348 (45%), Gaps = 17/348 (4%)
Query: 122 MNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANK 181
M + G +VV+ T LM R GR A A+ RM G +P A+TY I+ K
Sbjct: 1 MVETGCPANVVTFTTLMNGLCREGRVLQALALVDRMVEEGHQPDAVTYGTIVNGMC---K 57
Query: 182 FKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVT 241
+ L ++S +K + ++ ++ K G + KA+ +F M E+G+ + +T
Sbjct: 58 LGDTVSALNMLRKMDESQIKANVVIYSAIVDRLCKDGNHIKAQNIFTEMHEKGIFPNVLT 117
Query: 242 YNSLMSFETNY---KEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEML 298
YN ++ +Y + ++ M + PDVV+++ LINA+ K + A ++ EML
Sbjct: 118 YNCMIDGYCSYGKWSDAEQLLRDMIERNIDPDVVTFSALINAFVKEGKVSGAEELYREML 177
Query: 299 DAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTT-----------M 347
+ PT Y+ ++D F ++ A+ +F M CSPDI + T +
Sbjct: 178 RRNIFPTTITYSSMIDGFCKHSRLEDAKHMFDLMVSKGCSPDIITLNTLIDGCCRAKRHL 237
Query: 348 LSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGI 407
+ + ++ A+ F+ + +G P+++T TL+ G + LEK +E++ + + +
Sbjct: 238 IHGFCQVGNVNVAQDLFQEMISNGVSPDIVTCNTLLAGLCENGKLEKALEMFKVFQKSKM 297
Query: 408 KPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSL 455
+ I++ K D A + + G D NIL+ +
Sbjct: 298 DLDTATCNIIINGMCKGNKVDEAWDLFNSLPVNGVETDVVTYNILIGV 345
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/154 (22%), Positives = 72/154 (46%)
Query: 332 MRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNN 391
M C ++ ++TT+++ + A R+ ++G P+ +TYGT++ G K+ +
Sbjct: 1 MVETGCPANVVTFTTLMNGLCREGRVLQALALVDRMVEEGHQPDAVTYGTIVNGMCKLGD 60
Query: 392 LEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNI 451
+ + KM + IK N I++ I+D K+ + A + EM G P+ N
Sbjct: 61 TVSALNMLRKMDESQIKANVVIYSAIVDRLCKDGNHIKAQNIFTEMHEKGIFPNVLTYNC 120
Query: 452 LLSLAKTADERNEANELLGNFNHPNNEPGINGLS 485
++ + + ++A +LL + N +P + S
Sbjct: 121 MIDGYCSYGKWSDAEQLLRDMIERNIDPDVVTFS 154
>gi|147841407|emb|CAN66681.1| hypothetical protein VITISV_005087 [Vitis vinifera]
Length = 882
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 92/365 (25%), Positives = 172/365 (47%), Gaps = 7/365 (1%)
Query: 108 KQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSAL 167
+ G +A+++ M +G P V++T++M+ + + G+ +A I + M +
Sbjct: 344 RSGRMEEADELFKDMMSRGLLPDRVNYTSMMDGFFKAGKESDAFNIAQEMTEKSSGFDVV 403
Query: 168 TYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLF 227
Y +++ + K++ E F T + + L PD F+ MI Y K G A KL
Sbjct: 404 AYNVLINGLFKLGKYES--ESFHTGM--RQLGLAPDSATFNTMINAYCKEGNLGNALKLL 459
Query: 228 ALMAERGVQQSTVTYNSLMSFETNYKEVSKIYD---QMQRAGLQPDVVSYALLINAYGKA 284
M G++ +++T N L+ E+ K D M G P ++ +++A K+
Sbjct: 460 NEMKSYGLKPNSITCNILVQRLCAAGEIEKTMDLLNDMLVMGFHPTPTTHKAVLDASSKS 519
Query: 285 RREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSY 344
RR + L ++++ GV+ YN L+ F GM+ +A VFK M DI +Y
Sbjct: 520 RRADVILHXHDQLVGMGVKLDLSTYNTLISTFCRLGMIRRATLVFKDMMGKGILADIITY 579
Query: 345 TTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRV 404
++ Y +S ++ A ++ +G PNV TY L+ G + +++ + ++M+
Sbjct: 580 NALIHGYCISSHLKKAFAVHSQMLTEGVSPNVETYNILLGGLSAARLIKEAAGLVNQMKE 639
Query: 405 NGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNE 464
G+ PN T + ++ +GK + V Y EM + GF P + N+L+S + ++
Sbjct: 640 RGLVPNATTYDILVSGHGKIGNMKECVKLYCEMITKGFVPKTRTYNVLISCFAKGKKMSQ 699
Query: 465 ANELL 469
A EL+
Sbjct: 700 AKELM 704
Score = 125 bits (313), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 85/352 (24%), Positives = 168/352 (47%), Gaps = 8/352 (2%)
Query: 99 FLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQ 158
F +LI Y + G+ ++A ++L M +G AP +V++ LM + + G A+ + +
Sbjct: 20 FNVLIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGFCKIGDLFTAKKLMGEIS 79
Query: 159 SSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEK-SPLKPDQKMFHMMIYMYKKA 217
P+ +TY ++ + ++ ++A + + DE L PD + ++ K+
Sbjct: 80 LVNLEPNVITYTTLIDAYCKSQCLEDA----LYMYDEMTVKSLVPDVVTYTCIMNGLCKS 135
Query: 218 GGYEKARKLFALMAERGVQQSTVTYNSLMSF---ETNYKEVSKIYDQMQRAGLQPDVVSY 274
G E+A+ +F M E GV + +Y +L+ E N E + +M G+ DVV Y
Sbjct: 136 GKVEEAKSVFREMEEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVVRGIGFDVVVY 195
Query: 275 ALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRR 334
L++ KA A +F+ +L+ + P Y+ L+D G V++ + + M
Sbjct: 196 TALMDGLFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKGELLLQEMEE 255
Query: 335 DRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEK 394
P++ Y++++ Y + A R++ Q +PNV YGTLI GY K +
Sbjct: 256 KHIFPNVIVYSSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTLIDGYFKADQRGI 315
Query: 395 MMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQ 446
++++ +M+ G++ N + + ++ ++ + A +K+M S G PD+
Sbjct: 316 ALDLFKEMKSRGLEENNFVIDSFVNNLKRSGRMEEADELFKDMMSRGLLPDR 367
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 83/345 (24%), Positives = 159/345 (46%), Gaps = 10/345 (2%)
Query: 130 SVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVF 189
SV L++ Y R G A + M++ GP P +TY ++ F + A+++
Sbjct: 16 SVEHFNVLIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGFCKIGDLFTAKKLM 75
Query: 190 --MTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMS 247
++L++ L+P+ + +I Y K+ E A ++ M + + VTY +M+
Sbjct: 76 GEISLVN-----LEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIMN 130
Query: 248 F---ETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRP 304
+E ++ +M+ G+ P+ SYA LI++ K EA + M+ G+
Sbjct: 131 GLCKSGKVEEAKSVFREMEEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVVRGIGF 190
Query: 305 THKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFF 364
Y L+D +GM + A +F+ + + P+ +Y+ ++ + D+ E
Sbjct: 191 DVVVYTALMDGLFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKGELLL 250
Query: 365 RRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKN 424
+ +++ PNVI Y +++ GY K L + M++ KM I PN ++ T++D Y K
Sbjct: 251 QEMEEKHIFPNVIVYSSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTLIDGYFKA 310
Query: 425 KDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELL 469
A+ +KEM+S G + + ++ K + EA+EL
Sbjct: 311 DQRGIALDLFKEMKSRGLEENNFVIDSFVNNLKRSGRMEEADELF 355
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 123/498 (24%), Positives = 210/498 (42%), Gaps = 58/498 (11%)
Query: 13 RRKVEVFKDAADEAGKKNWRRLMNQIEEVGSAVAVLRSERTRGQPLPKDLVLGTLVR-LK 71
RR VE F D + E+ AV +L +T G P P + TL+
Sbjct: 14 RRSVEHFNVLIDGYCRNG---------EISRAVELLEGMKTEG-PAPDIVTYNTLMNGFC 63
Query: 72 QLKKWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSV 131
++ +++ + + + + N + + LI AY K A + M K P V
Sbjct: 64 KIGDLFTAKKLMGEISLVNL-EPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDV 122
Query: 132 VSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIIL-KLFVEANK--------- 181
V++T +M + G+ + A+++FR M+ G P+ +Y ++ LF E N
Sbjct: 123 VTYTCIMNGLCKSGKVEEAKSVFREMEEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGR 182
Query: 182 --------------------FK-----EAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKK 216
FK AE++F LL+E L P+ + +I + K
Sbjct: 183 MVVRGIGFDVVVYTALMDGLFKAGMANNAEDMFQVLLEES---LVPNCVTYSALIDGHCK 239
Query: 217 AGGYEKARKLFALMAERGVQQSTVTYNSLMSFETN---YKEVSKIYDQMQRAGLQPDVVS 273
G K L M E+ + + + Y+S++ T E + +M + + P+V
Sbjct: 240 LGDVNKGELLLQEMEEKHIFPNVIVYSSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVFV 299
Query: 274 YALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMR 333
Y LI+ Y KA + AL +F+EM G+ + + ++ SG +++A +FK M
Sbjct: 300 YGTLIDGYFKADQRGIALDLFKEMKSRGLEENNFVIDSFVNNLKRSGRMEEADELFKDMM 359
Query: 334 RDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRL--KQDGFVPNVITYGTLIKGYAKVNN 391
PD +YT+M+ + A A + + K GF +V+ Y LI G K+
Sbjct: 360 SRGLLPDRVNYTSMMDGFFKAGKESDAFNIAQEMTEKSSGF--DVVAYNVLINGLFKLGK 417
Query: 392 LEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNI 451
E + MR G+ P+ F T+++AY K + +A+ EM+S G P+ NI
Sbjct: 418 YES-ESFHTGMRQLGLAPDSATFNTMINAYCKEGNLGNALKLLNEMKSYGLKPNSITCNI 476
Query: 452 LLSLAKTADERNEANELL 469
L+ A E + +LL
Sbjct: 477 LVQRLCAAGEIEKTMDLL 494
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 95/412 (23%), Positives = 168/412 (40%), Gaps = 40/412 (9%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + + LI + K GD NK E +L M +K P+V+ ++++++ Y + G A +
Sbjct: 226 NCVTYSALIDGHCKLGDVNKGELLLQEMEEKHIFPNVIVYSSIVDGYTKKGLLNEAMDVM 285
Query: 155 RRMQSSGPRPSALTYQ-------------IILKLF-------VEANKF------------ 182
R+M P+ Y I L LF +E N F
Sbjct: 286 RKMVQRNILPNVFVYGTLIDGYFKADQRGIALDLFKEMKSRGLEENNFVIDSFVNNLKRS 345
Query: 183 ---KEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQST 239
+EA+E+F ++ L PD+ + M+ + KAG A + M E+
Sbjct: 346 GRMEEADELFKDMMSR---GLLPDRVNYTSMMDGFFKAGKESDAFNIAQEMTEKSSGFDV 402
Query: 240 VTYNSLMS--FETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEM 297
V YN L++ F+ E + M++ GL PD ++ +INAY K AL + EM
Sbjct: 403 VAYNVLINGLFKLGKYESESFHTGMRQLGLAPDSATFNTMINAYCKEGNLGNALKLLNEM 462
Query: 298 LDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDM 357
G++P NIL+ +G +++ + M P ++ +L A +
Sbjct: 463 KSYGLKPNSITCNILVQRLCAAGEIEKTMDLLNDMLVMGFHPTPTTHKAVLDASSKSRRA 522
Query: 358 EGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTI 417
+ +L G ++ TY TLI + ++ + + ++ M GI + + +
Sbjct: 523 DVILHXHDQLVGMGVKLDLSTYNTLISTFCRLGMIRRATLVFKDMMGKGILADIITYNAL 582
Query: 418 MDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELL 469
+ Y + A + +M + G P+ + NILL A EA L+
Sbjct: 583 IHGYCISSHLKKAFAVHSQMLTEGVSPNVETYNILLGGLSAARLIKEAAGLV 634
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 64/295 (21%), Positives = 130/295 (44%), Gaps = 18/295 (6%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + +L+ G+ K +L+ M G+ P+ +H A+++A + R
Sbjct: 470 NSITCNILVQRLCAAGEIEKTMDLLNDMLVMGFHPTPTTHKAVLDASSKSRRADVILHXH 529
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
++ G + TY ++ F + A VF ++ + + D ++ +I+ Y
Sbjct: 530 DQLVGMGVKLDLSTYNTLISTFCRLGMIRRATLVFKDMMGK---GILADIITYNALIHGY 586
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSLM---SFETNYKEVSKIYDQMQRAGLQPDV 271
+ +KA + + M GV + TYN L+ S KE + + +QM+ GL P+
Sbjct: 587 CISSHLKKAFAVHSQMLTEGVSPNVETYNILLGGLSAARLIKEAAGLVNQMKERGLVPNA 646
Query: 272 VSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKC 331
+Y +L++ +GK +E + ++ EM+ G P + YN+L+ FA + QA+ + +
Sbjct: 647 TTYDILVSGHGKIGNMKECVKLYCEMITKGFVPKTRTYNVLISCFAKGKKMSQAKELMQE 706
Query: 332 MRRDRCSPDICSYTTMLSAYVNASD------------MEGAEKFFRRLKQDGFVP 374
M+ P+ +Y ++ + S A++ F + + GF+P
Sbjct: 707 MQVRGIPPNSSTYDILICGWYKLSKQPELNKSLKRSYQAEAKRLFEEMNEKGFIP 761
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 79/145 (54%)
Query: 302 VRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAE 361
+R + + +N+L+D + +G + +A + + M+ + +PDI +Y T+++ + D+ A+
Sbjct: 13 IRRSVEHFNVLIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGFCKIGDLFTAK 72
Query: 362 KFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAY 421
K + PNVITY TLI Y K LE + +YD+M V + P+ +T IM+
Sbjct: 73 KLMGEISLVNLEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIMNGL 132
Query: 422 GKNKDFDSAVVWYKEMESCGFPPDQ 446
K+ + A ++EME G P++
Sbjct: 133 CKSGKVEEAKSVFREMEEVGVVPNR 157
Score = 72.0 bits (175), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 42/175 (24%), Positives = 81/175 (46%)
Query: 263 QRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMV 322
Q ++ V + +LI+ Y + A+ + E M G P YN L++ F G +
Sbjct: 9 QHPEIRRSVEHFNVLIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGFCKIGDL 68
Query: 323 DQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTL 382
A+ + + P++ +YTT++ AY + +E A + + VP+V+TY +
Sbjct: 69 FTAKKLMGEISLVNLEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCI 128
Query: 383 IKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEM 437
+ G K +E+ ++ +M G+ PN+ + T++D+ K + A V M
Sbjct: 129 MNGLCKSGKVEEAKSVFREMEEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGRM 183
>gi|168036199|ref|XP_001770595.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162678116|gb|EDQ64578.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 743
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 98/421 (23%), Positives = 202/421 (47%), Gaps = 11/421 (2%)
Query: 52 RTRGQPLPKDLVLGTLVRLKQLKKWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGD 111
+TRG +++ L +Q W ++ E+L + + ++ F LI + K
Sbjct: 6 KTRGNVYSYNIMFKILGSRQQ---WPIIDELLGQM-LGDGCVPDDYTFNTLIMSASKADY 61
Query: 112 FNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQI 171
+ A + M +KG P+ ++++ +M Y + G+ ++AE F M SG + A Y
Sbjct: 62 ADYATRAFQMMLEKGVQPTRLTYSMMMLLYQKNGKVEDAEVAFSHMLQSGIQVVA-AYSA 120
Query: 172 ILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMA 231
++ ++ F++AE++ + D + PD+ + + Y + G E+A + M
Sbjct: 121 MIAIYTRCGFFEKAEKI---MEDMWNHKIAPDRDNWLKQMNTYGQQGKIEEAEHIMDTME 177
Query: 232 ERGVQQSTVTYNSLMSFETN---YKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREE 288
G+ V YNS+++ Y++ +++++M+ AGL+PD V+Y+ +I A G+A +
Sbjct: 178 RLGMHLGVVGYNSMITAYGKAGLYEKALRLFEKMKEAGLEPDEVTYSCMIGACGRAGKLR 237
Query: 289 EALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTML 348
+AL F+ M G+ P +N L+ + + V V M+ C+PD + ++
Sbjct: 238 DALDYFQAMKRLGIMPASSNFNTLISLYGKARNVVGIVRVLADMKNFGCTPDSQTLDAVV 297
Query: 349 SAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIK 408
AY A + + L++ G+V + +YGTL+ Y K N ++ + ++ MR G+
Sbjct: 298 RAYERAGQTKKVVQVLSLLREAGWVEDTESYGTLLHVYLKCNLQKEALSVFSAMRKAGMA 357
Query: 409 PNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANEL 468
P + + +++ A F+ A +++M+S G P + ++++ + +A EL
Sbjct: 358 PKEYMCRSLICACKDAGMFEDATNVFRDMQSAGVVPSLETSCTMINVHGLKGDVKQAEEL 417
Query: 469 L 469
Sbjct: 418 F 418
Score = 138 bits (348), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 106/409 (25%), Positives = 202/409 (49%), Gaps = 12/409 (2%)
Query: 61 DLVLGTLVRLKQLKKWNVVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLS 120
D V+ R Q KK V +VL LR W + E + L+ Y K +A V S
Sbjct: 294 DAVVRAYERAGQTKK---VVQVLSLLREAGWVEDTE-SYGTLLHVYLKCNLQKEALSVFS 349
Query: 121 FMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEAN 180
M K G AP +L+ A G +++A +FR MQS+G PS T ++ +
Sbjct: 350 AMRKAGMAPKEYMCRSLICACKDAGMFEDATNVFRDMQSAGVVPSLETSCTMINVHGLKG 409
Query: 181 KFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAER-GVQQST 239
K+AEE+F +L S K D ++++I +Y + G +E+A +++ LM E G+ +
Sbjct: 410 DVKQAEELFRSL---RSSVSKLDIIAYNVIINVYMRYGMHEEAFRIYKLMEEEDGLLPDS 466
Query: 240 VTYNSL--MSFETNYK-EVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEE 296
TY+S+ M + N + + +IY +++ + ++ D V ++N + EE +F+E
Sbjct: 467 YTYHSMLRMCQKCNLQTQAEEIYWRLRNSDVELDEVMCNCVLNTCARFLPLEEVHKIFQE 526
Query: 297 MLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASD 356
M+D G P +N+++D + SGM+D+AR K + + D +++T++++Y D
Sbjct: 527 MIDVGCIPNTITFNVMIDLYGKSGMLDRARDASK-LAQQLGVADKITFSTLINSYGKKQD 585
Query: 357 MEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTT 416
E ++ G ++ Y ++ Y K +L+K+ ++ +M +G++ + +
Sbjct: 586 FRNMEATLWEMQNAGHGGSLEAYNCVLDAYGKAGHLDKLEDVIARMEKSGLQMDLASYNI 645
Query: 417 IMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEA 465
+++ YG++ + +M+ GF PD+ N ++ AD ++A
Sbjct: 646 LINIYGRHTKIAEMEALFHKMQEEGFIPDRWTYNTMIRTYGYADYPDKA 694
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 92/378 (24%), Positives = 172/378 (45%), Gaps = 39/378 (10%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
LI A G F A V M G PS+ + ++ +G G K AE +FR ++SS
Sbjct: 366 LICACKDAGMFEDATNVFRDMQSAGVVPSLETSCTMINVHGLKGDVKQAEELFRSLRSSV 425
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
+ + Y +I+ +++ +EA ++ L EE+ L PD +H M+ M +K
Sbjct: 426 SKLDIIAYNVIINVYMRYGMHEEAFRIYK--LMEEEDGLLPDSYTYHSMLRMCQKCNLQT 483
Query: 222 KARKLFALMAERGVQQSTVTYNSLMSFETNY---KEVSKIYDQMQRAGLQP--------- 269
+A +++ + V+ V N +++ + +EV KI+ +M G P
Sbjct: 484 QAEEIYWRLRNSDVELDEVMCNCVLNTCARFLPLEEVHKIFQEMIDVGCIPNTITFNVMI 543
Query: 270 -------------------------DVVSYALLINAYGKARREEEALAVFEEMLDAGVRP 304
D ++++ LIN+YGK + A EM +AG
Sbjct: 544 DLYGKSGMLDRARDASKLAQQLGVADKITFSTLINSYGKKQDFRNMEATLWEMQNAGHGG 603
Query: 305 THKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFF 364
+ +AYN +LDA+ +G +D+ V M + D+ SY +++ Y + + E F
Sbjct: 604 SLEAYNCVLDAYGKAGHLDKLEDVIARMEKSGLQMDLASYNILINIYGRHTKIAEMEALF 663
Query: 365 RRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKN 424
+++++GF+P+ TY T+I+ Y + +K ++ + M+ +GI P++ + ++ A+ K
Sbjct: 664 HKMQEEGFIPDRWTYNTMIRTYGYADYPDKAVDTFKMMQDSGIMPDRVTYVMLVAAFEKA 723
Query: 425 KDFDSAVVWYKEMESCGF 442
+ A W M G+
Sbjct: 724 GNLLEAARWSLWMTQAGY 741
Score = 128 bits (322), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 91/397 (22%), Positives = 183/397 (46%), Gaps = 42/397 (10%)
Query: 98 DFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRM 157
++L + YG+QG +AE ++ M + G VV + +++ AYG+ G Y+ A +F +M
Sbjct: 152 NWLKQMNTYGQQGKIEEAEHIMDTMERLGMHLGVVGYNSMITAYGKAGLYEKALRLFEKM 211
Query: 158 QSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKA 217
+ +G P +TY ++ A K ++A + F + ++ + P F+ +I +Y KA
Sbjct: 212 KEAGLEPDEVTYSCMIGACGRAGKLRDALDYFQAM---KRLGIMPASSNFNTLISLYGKA 268
Query: 218 GGYEKARKLFALMAERGVQQSTVTYNSLM-SFET--NYKEVSKIYDQMQRAGLQPDVVSY 274
++ A M G + T ++++ ++E K+V ++ ++ AG D SY
Sbjct: 269 RNVVGIVRVLADMKNFGCTPDSQTLDAVVRAYERAGQTKKVVQVLSLLREAGWVEDTESY 328
Query: 275 ALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRR 334
L++ Y K ++EAL+VF M AG+ P L+ A +GM + A VF+ M+
Sbjct: 329 GTLLHVYLKCNLQKEALSVFSAMRKAGMAPKEYMCRSLICACKDAGMFEDATNVFRDMQS 388
Query: 335 DRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLK-------------------------- 368
P + + TM++ + D++ AE+ FR L+
Sbjct: 389 AGVVPSLETSCTMINVHGLKGDVKQAEELFRSLRSSVSKLDIIAYNVIINVYMRYGMHEE 448
Query: 369 ----------QDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIM 418
+DG +P+ TY ++++ K N + EIY ++R + ++ ++ + ++
Sbjct: 449 AFRIYKLMEEEDGLLPDSYTYHSMLRMCQKCNLQTQAEEIYWRLRNSDVELDEVMCNCVL 508
Query: 419 DAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSL 455
+ + + ++EM G P+ N+++ L
Sbjct: 509 NTCARFLPLEEVHKIFQEMIDVGCIPNTITFNVMIDL 545
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 101/428 (23%), Positives = 186/428 (43%), Gaps = 82/428 (19%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
+ITAYGK G + KA ++ M + G P V+++ ++ A GR G+ ++A F+ M+ G
Sbjct: 191 MITAYGKAGLYEKALRLFEKMKEAGLEPDEVTYSCMIGACGRAGKLRDALDYFQAMKRLG 250
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
P++ + ++ L+ K + + L D + PD + ++ Y++AG +
Sbjct: 251 IMPASSNFNTLISLY---GKARNVVGIVRVLADMKNFGCTPDSQTLDAVVRAYERAGQTK 307
Query: 222 KARKLFALMAERGVQQSTVTYNSLMS--FETNY-KEVSKIYDQMQRAGLQPDVVSYALLI 278
K ++ +L+ E G + T +Y +L+ + N KE ++ M++AG+ P LI
Sbjct: 308 KVVQVLSLLREAGWVEDTESYGTLLHVYLKCNLQKEALSVFSAMRKAGMAPKEYMCRSLI 367
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHK------------------------------- 307
A A E+A VF +M AGV P+ +
Sbjct: 368 CACKDAGMFEDATNVFRDMQSAGVVPSLETSCTMINVHGLKGDVKQAEELFRSLRSSVSK 427
Query: 308 ----AYNILLDAFAISGMVDQARTVFKCMRR-DRCSPDICSYTTMLSAYVNASDMEGAEK 362
AYN++++ + GM ++A ++K M D PD +Y +ML + AE+
Sbjct: 428 LDIIAYNVIINVYMRYGMHEEAFRIYKLMEEEDGLLPDSYTYHSMLRMCQKCNLQTQAEE 487
Query: 363 FFRRLKQD-----------------------------------GFVPNVITYGTLIKGYA 387
+ RL+ G +PN IT+ +I Y
Sbjct: 488 IYWRLRNSDVELDEVMCNCVLNTCARFLPLEEVHKIFQEMIDVGCIPNTITFNVMIDLYG 547
Query: 388 KVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDS--AVVWYKEMESCGFPPD 445
K L++ + + G+ ++ F+T++++YGK +DF + A +W EM++ G
Sbjct: 548 KSGMLDRARDASKLAQQLGV-ADKITFSTLINSYGKKQDFRNMEATLW--EMQNAGHGGS 604
Query: 446 QKAKNILL 453
+A N +L
Sbjct: 605 LEAYNCVL 612
Score = 116 bits (290), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 88/390 (22%), Positives = 168/390 (43%), Gaps = 7/390 (1%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + ++ G + + +++L M G P + L+ + + A F
Sbjct: 10 NVYSYNIMFKILGSRQQWPIIDELLGQMLGDGCVPDDYTFNTLIMSASKADYADYATRAF 69
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
+ M G +P+ LTY +++ L+ + K ++AE F +L + + MI +Y
Sbjct: 70 QMMLEKGVQPTRLTYSMMMLLYQKNGKVEDAEVAFSHMLQSGIQVVAA----YSAMIAIY 125
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSLMSF---ETNYKEVSKIYDQMQRAGLQPDV 271
+ G +EKA K+ M + + M+ + +E I D M+R G+ V
Sbjct: 126 TRCGFFEKAEKIMEDMWNHKIAPDRDNWLKQMNTYGQQGKIEEAEHIMDTMERLGMHLGV 185
Query: 272 VSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKC 331
V Y +I AYGKA E+AL +FE+M +AG+ P Y+ ++ A +G + A F+
Sbjct: 186 VGYNSMITAYGKAGLYEKALRLFEKMKEAGLEPDEVTYSCMIGACGRAGKLRDALDYFQA 245
Query: 332 MRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNN 391
M+R P ++ T++S Y A ++ G + +K G P+ T +++ Y +
Sbjct: 246 MKRLGIMPASSNFNTLISLYGKARNVVGIVRVLADMKNFGCTPDSQTLDAVVRAYERAGQ 305
Query: 392 LEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNI 451
+K++++ +R G + + T++ Y K A+ + M G P +
Sbjct: 306 TKKVVQVLSLLREAGWVEDTESYGTLLHVYLKCNLQKEALSVFSAMRKAGMAPKEYMCRS 365
Query: 452 LLSLAKTADERNEANELLGNFNHPNNEPGI 481
L+ K A +A + + P +
Sbjct: 366 LICACKDAGMFEDATNVFRDMQSAGVVPSL 395
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 86/371 (23%), Positives = 172/371 (46%), Gaps = 7/371 (1%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
+I Y + G F KAEK++ M AP + M YG+ G+ + AE I M+ G
Sbjct: 121 MIAIYTRCGFFEKAEKIMEDMWNHKIAPDRDNWLKQMNTYGQQGKIEEAEHIMDTMERLG 180
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
+ Y ++ + +A +++A +F + +++ L+PD+ + MI +AG
Sbjct: 181 MHLGVVGYNSMITAYGKAGLYEKALRLFEKM---KEAGLEPDEVTYSCMIGACGRAGKLR 237
Query: 222 KARKLFALMAERGVQQSTVTYNSLMSF---ETNYKEVSKIYDQMQRAGLQPDVVSYALLI 278
A F M G+ ++ +N+L+S N + ++ M+ G PD + ++
Sbjct: 238 DALDYFQAMKRLGIMPASSNFNTLISLYGKARNVVGIVRVLADMKNFGCTPDSQTLDAVV 297
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCS 338
AY +A + ++ + V + +AG ++Y LL + + +A +VF MR+ +
Sbjct: 298 RAYERAGQTKKVVQVLSLLREAGWVEDTESYGTLLHVYLKCNLQKEALSVFSAMRKAGMA 357
Query: 339 PDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEI 398
P +++ A +A E A FR ++ G VP++ T T+I + ++++ E+
Sbjct: 358 PKEYMCRSLICACKDAGMFEDATNVFRDMQSAGVVPSLETSCTMINVHGLKGDVKQAEEL 417
Query: 399 YDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESC-GFPPDQKAKNILLSLAK 457
+ +R + K + + I++ Y + + A YK ME G PD + +L + +
Sbjct: 418 FRSLRSSVSKLDIIAYNVIINVYMRYGMHEEAFRIYKLMEEEDGLLPDSYTYHSMLRMCQ 477
Query: 458 TADERNEANEL 468
+ + +A E+
Sbjct: 478 KCNLQTQAEEI 488
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 86/362 (23%), Positives = 160/362 (44%), Gaps = 7/362 (1%)
Query: 97 MDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRR 156
+ + M++ Y K G AE S M + G V +++A++ Y R G ++ AE I
Sbjct: 82 LTYSMMMLLYQKNGKVEDAEVAFSHMLQSG-IQVVAAYSAMIAIYTRCGFFEKAEKIMED 140
Query: 157 MQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKK 216
M + P + + + + K +EAE + T+ E+ + ++ MI Y K
Sbjct: 141 MWNHKIAPDRDNWLKQMNTYGQQGKIEEAEHIMDTM---ERLGMHLGVVGYNSMITAYGK 197
Query: 217 AGGYEKARKLFALMAERGVQQSTVTYNSLMSF---ETNYKEVSKIYDQMQRAGLQPDVVS 273
AG YEKA +LF M E G++ VTY+ ++ ++ + M+R G+ P +
Sbjct: 198 AGLYEKALRLFEKMKEAGLEPDEVTYSCMIGACGRAGKLRDALDYFQAMKRLGIMPASSN 257
Query: 274 YALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMR 333
+ LI+ YGKAR + V +M + G P + + ++ A+ +G + V +R
Sbjct: 258 FNTLISLYGKARNVVGIVRVLADMKNFGCTPDSQTLDAVVRAYERAGQTKKVVQVLSLLR 317
Query: 334 RDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLE 393
D SY T+L Y+ + + A F +++ G P +LI E
Sbjct: 318 EAGWVEDTESYGTLLHVYLKCNLQKEALSVFSAMRKAGMAPKEYMCRSLICACKDAGMFE 377
Query: 394 KMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILL 453
++ M+ G+ P+ T+++ +G D A ++ + S D A N+++
Sbjct: 378 DATNVFRDMQSAGVVPSLETSCTMINVHGLKGDVKQAEELFRSLRSSVSKLDIIAYNVII 437
Query: 454 SL 455
++
Sbjct: 438 NV 439
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 87/175 (49%), Gaps = 6/175 (3%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
+++ F LI +YGK+ DF E L M G+ S+ ++ +++AYG+ G E +
Sbjct: 569 DKITFSTLINSYGKKQDFRNMEATLWEMQNAGHGGSLEAYNCVLDAYGKAGHLDKLEDVI 628
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
RM+ SG + +Y I++ ++ K E E +F + +E PD+ ++ MI Y
Sbjct: 629 ARMEKSGLQMDLASYNILINIYGRHTKIAEMEALFHKMQEE---GFIPDRWTYNTMIRTY 685
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSLM-SFET--NYKEVSKIYDQMQRAG 266
A +KA F +M + G+ VTY L+ +FE N E ++ M +AG
Sbjct: 686 GYADYPDKAVDTFKMMQDSGIMPDRVTYVMLVAAFEKAGNLLEAARWSLWMTQAG 740
>gi|297844892|ref|XP_002890327.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297336169|gb|EFH66586.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 903
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 103/401 (25%), Positives = 190/401 (47%), Gaps = 5/401 (1%)
Query: 84 EWLRIQSWWDFNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGR 143
E +R+ + F+ F M++ Y ++G A V M K G PS++S +L+ +
Sbjct: 143 ELVRVFKEFSFSPTVFDMILKVYAEKGMVKNALHVFDNMGKYGRIPSLLSCNSLLSNLVK 202
Query: 144 GGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPD 203
G A ++ +M S P T I++ + K +A F +D L+ +
Sbjct: 203 KGENFVALHVYDQMISFEVSPDVFTCSIVVNAYCRCGKVDKAM-AFAKEMDNSLG-LELN 260
Query: 204 QKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETN---YKEVSKIYD 260
+ +I Y G E ++ LM+ERGV ++ VT+ SL+ +E ++++
Sbjct: 261 VVTCNSLINGYAMIGDVEGMTRVLRLMSERGVSRNVVTFTSLIKSYCKKGLMEEAEQVFE 320
Query: 261 QMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISG 320
+ L PD + +LI+ Y + R +A+ V + M++ GVR N L++ + SG
Sbjct: 321 LVTEKKLVPDQHMHGVLIDGYCRNGRICDAVRVHDYMIEMGVRTNTTICNSLINGYCKSG 380
Query: 321 MVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYG 380
+ +A + M PD +Y T++ Y A ++ A K R+ Q VP V+TY
Sbjct: 381 QLVEAEQILTRMNDWSLKPDHHTYNTLVDGYCRAGHVDEALKLCGRMCQKEVVPTVMTYN 440
Query: 381 TLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESC 440
L+KGY+++ ++ ++ M G+ N+ +T+++A K DFD A+ ++ + +
Sbjct: 441 ILLKGYSRIGAFHDVLSLWKMMLKRGVTANEISCSTLLEALFKLGDFDEAMKLWENVLAR 500
Query: 441 GFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEPGI 481
G D N+++S ++ NEA E+L N N +P +
Sbjct: 501 GLLTDTITLNVMISGLCKMEKVNEAKEILDNVNIFRCKPDV 541
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 83/346 (23%), Positives = 161/346 (46%), Gaps = 6/346 (1%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + F LI +Y K+G +AE+V + +K P H L++ Y R GR +A +
Sbjct: 295 NVVTFTSLIKSYCKKGLMEEAEQVFELVTEKKLVPDQHMHGVLIDGYCRNGRICDAVRVH 354
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
M G R + ++ + ++ + EAE++ + D LKPD ++ ++ Y
Sbjct: 355 DYMIEMGVRTNTTICNSLINGYCKSGQLVEAEQILTRMNDWS---LKPDHHTYNTLVDGY 411
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSLM---SFETNYKEVSKIYDQMQRAGLQPDV 271
+AG ++A KL M ++ V + +TYN L+ S + +V ++ M + G+ +
Sbjct: 412 CRAGHVDEALKLCGRMCQKEVVPTVMTYNILLKGYSRIGAFHDVLSLWKMMLKRGVTANE 471
Query: 272 VSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKC 331
+S + L+ A K +EA+ ++E +L G+ N+++ V++A+ +
Sbjct: 472 ISCSTLLEALFKLGDFDEAMKLWENVLARGLLTDTITLNVMISGLCKMEKVNEAKEILDN 531
Query: 332 MRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNN 391
+ RC PD+ +Y + Y N +++ A +++ G P + Y TLI G K +
Sbjct: 532 VNIFRCKPDVQTYQALSHGYYNVGNLKEAFAVKDFMEKKGIFPTIEMYNTLISGAFKYKH 591
Query: 392 LEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEM 437
L K+ ++ ++R G+ P + ++ + D A EM
Sbjct: 592 LNKVADLVIELRARGLTPTVATYGALITGWCNIGMIDKAYATCFEM 637
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 98/373 (26%), Positives = 168/373 (45%), Gaps = 7/373 (1%)
Query: 101 MLITAYGKQGDFNKAEKVLSFM-NKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQS 159
+++ AY + G +KA M N G +VV+ +L+ Y G + + R M
Sbjct: 230 IVVNAYCRCGKVDKAMAFAKEMDNSLGLELNVVTCNSLINGYAMIGDVEGMTRVLRLMSE 289
Query: 160 SGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGG 219
G + +T+ ++K + + +EAE+VF L+ E+K L PDQ M ++I Y + G
Sbjct: 290 RGVSRNVVTFTSLIKSYCKKGLMEEAEQVF-ELVTEKK--LVPDQHMHGVLIDGYCRNGR 346
Query: 220 YEKARKLFALMAERGVQQSTVTYNSLMSFET---NYKEVSKIYDQMQRAGLQPDVVSYAL 276
A ++ M E GV+ +T NSL++ E +I +M L+PD +Y
Sbjct: 347 ICDAVRVHDYMIEMGVRTNTTICNSLINGYCKSGQLVEAEQILTRMNDWSLKPDHHTYNT 406
Query: 277 LINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDR 336
L++ Y +A +EAL + M V PT YNILL ++ G +++K M +
Sbjct: 407 LVDGYCRAGHVDEALKLCGRMCQKEVVPTVMTYNILLKGYSRIGAFHDVLSLWKMMLKRG 466
Query: 337 CSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMM 396
+ + S +T+L A D + A K + + G + + IT +I G K+ + +
Sbjct: 467 VTANEISCSTLLEALFKLGDFDEAMKLWENVLARGLLTDTITLNVMISGLCKMEKVNEAK 526
Query: 397 EIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLA 456
EI D + + KP+ + + Y + A ME G P + N L+S A
Sbjct: 527 EILDNVNIFRCKPDVQTYQALSHGYYNVGNLKEAFAVKDFMEKKGIFPTIEMYNTLISGA 586
Query: 457 KTADERNEANELL 469
N+ +L+
Sbjct: 587 FKYKHLNKVADLV 599
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 92/407 (22%), Positives = 171/407 (42%), Gaps = 46/407 (11%)
Query: 97 MDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRR 156
M + +L+ Y + G F+ + M K+G + +S + L+EA + G + A ++
Sbjct: 437 MTYNILLKGYSRIGAFHDVLSLWKMMLKRGVTANEISCSTLLEALFKLGDFDEAMKLWEN 496
Query: 157 MQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKK 216
+ + G +T +++ + K EA+E+ L + KPD + + + + Y
Sbjct: 497 VLARGLLTDTITLNVMISGLCKMEKVNEAKEI---LDNVNIFRCKPDVQTYQALSHGYYN 553
Query: 217 AGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSKIYD---QMQRAGLQPDVVS 273
G ++A + M ++G+ + YN+L+S YK ++K+ D +++ GL P V +
Sbjct: 554 VGNLKEAFAVKDFMEKKGIFPTIEMYNTLISGAFKYKHLNKVADLVIELRARGLTPTVAT 613
Query: 274 YALLINAYGKARREEEALAVFEEMLDAG----VRPTHKAYNIL--LDAFAISGMVDQART 327
Y LI + ++A A EM++ G V K N L LD F + ++ Q
Sbjct: 614 YGALITGWCNIGMIDKAYATCFEMIEKGITLNVNICSKIANSLFRLDKFDEACLLLQKIV 673
Query: 328 VF-------------------KCMRRDRCS-------------PDICSYTTMLSAYVNAS 355
F C++ + + P+ Y ++ A
Sbjct: 674 DFDLLLPGYQSLKEFLEPSATTCLKTQKIAESVENSTPKKLLVPNNIVYNVAIAGLCKAG 733
Query: 356 DMEGAEKFFR-RLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIF 414
+ A+K F L D F+P+ TY LI G A ++ K + D+M + GI PN +
Sbjct: 734 KLTDAQKLFSDLLSSDRFIPDEYTYTILIHGCAIDGDINKAFNLRDEMALKGIIPNIVTY 793
Query: 415 TTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILL-SLAKTAD 460
++ K + D A +++ G P+ N L+ L K+ D
Sbjct: 794 NALIKGLCKLGNVDRAQRLLRKLPQKGTTPNAITYNTLIDGLIKSGD 840
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 80/381 (20%), Positives = 152/381 (39%), Gaps = 49/381 (12%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
NE+ L+ A K GDF++A K+ + +G ++ ++ + + A+ I
Sbjct: 470 NEISCSTLLEALFKLGDFDEAMKLWENVLARGLLTDTITLNVMISGLCKMEKVNEAKEIL 529
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEV--FMTLLDEEKSPLKPDQKMFHMMIY 212
+ +P TYQ + + KEA V FM EK + P +M++ +I
Sbjct: 530 DNVNIFRCKPDVQTYQALSHGYYNVGNLKEAFAVKDFM-----EKKGIFPTIEMYNTLIS 584
Query: 213 MYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSKIYD---QMQRAGLQP 269
K K L + RG+ + TY +L++ N + K Y +M G+
Sbjct: 585 GAFKYKHLNKVADLVIELRARGLTPTVATYGALITGWCNIGMIDKAYATCFEMIEKGITL 644
Query: 270 DVVSYALLINAYGKARREEEALAVFEEMLDAGVR-------------------------- 303
+V + + N+ + + +EA + ++++D +
Sbjct: 645 NVNICSKIANSLFRLDKFDEACLLLQKIVDFDLLLPGYQSLKEFLEPSATTCLKTQKIAE 704
Query: 304 ------------PTHKAYNILLDAFAISGMVDQARTVFK-CMRRDRCSPDICSYTTMLSA 350
P + YN+ + +G + A+ +F + DR PD +YT ++
Sbjct: 705 SVENSTPKKLLVPNNIVYNVAIAGLCKAGKLTDAQKLFSDLLSSDRFIPDEYTYTILIHG 764
Query: 351 YVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPN 410
D+ A + G +PN++TY LIKG K+ N+++ + K+ G PN
Sbjct: 765 CAIDGDINKAFNLRDEMALKGIIPNIVTYNALIKGLCKLGNVDRAQRLLRKLPQKGTTPN 824
Query: 411 QTIFTTIMDAYGKNKDFDSAV 431
+ T++D K+ D A+
Sbjct: 825 AITYNTLIDGLIKSGDVAEAM 845
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 79/349 (22%), Positives = 143/349 (40%), Gaps = 45/349 (12%)
Query: 101 MLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSS 160
++I+ K N+A+++L +N P V ++ AL Y G K A A+ M+
Sbjct: 511 VMISGLCKMEKVNEAKEILDNVNIFRCKPDVQTYQALSHGYYNVGNLKEAFAVKDFMEKK 570
Query: 161 GPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGY 220
G P+ Y ++ A K+K +V +++ L P + +I + G
Sbjct: 571 GIFPTIEMYNTLIS---GAFKYKHLNKVADLVIELRARGLTPTVATYGALITGWCNIGMI 627
Query: 221 EKARKLFALMAERGVQ--------------------------QSTVTYNSLMSFETNYKE 254
+KA M E+G+ Q V ++ L+ + KE
Sbjct: 628 DKAYATCFEMIEKGITLNVNICSKIANSLFRLDKFDEACLLLQKIVDFDLLLPGYQSLKE 687
Query: 255 -----------VSKIYDQMQRAG----LQPDVVSYALLINAYGKARREEEALAVFEEMLD 299
KI + ++ + L P+ + Y + I KA + +A +F ++L
Sbjct: 688 FLEPSATTCLKTQKIAESVENSTPKKLLVPNNIVYNVAIAGLCKAGKLTDAQKLFSDLLS 747
Query: 300 AG-VRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDME 358
+ P Y IL+ AI G +++A + M P+I +Y ++ +++
Sbjct: 748 SDRFIPDEYTYTILIHGCAIDGDINKAFNLRDEMALKGIIPNIVTYNALIKGLCKLGNVD 807
Query: 359 GAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGI 407
A++ R+L Q G PN ITY TLI G K ++ + M + +KM G+
Sbjct: 808 RAQRLLRKLPQKGTTPNAITYNTLIDGLIKSGDVAEAMRLKEKMIEKGL 856
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/308 (19%), Positives = 132/308 (42%), Gaps = 22/308 (7%)
Query: 193 LDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNY 252
L ++ +PD K + M+++ +A Y + + + V + L+ +
Sbjct: 93 LASKQQKFRPDYKAYCKMVHILSRARNYGQTKSYLCELVALN-HSGFVVWGELVRVFKEF 151
Query: 253 KEVSKIYDQMQRAGLQPDVVSYALLI----NAYGK--------------ARREEE--ALA 292
++D + + + +V AL + YG+ ++ E AL
Sbjct: 152 SFSPTVFDMILKVYAEKGMVKNALHVFDNMGKYGRIPSLLSCNSLLSNLVKKGENFVALH 211
Query: 293 VFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDR-CSPDICSYTTMLSAY 351
V+++M+ V P +I+++A+ G VD+A K M ++ + ++++ Y
Sbjct: 212 VYDQMISFEVSPDVFTCSIVVNAYCRCGKVDKAMAFAKEMDNSLGLELNVVTCNSLINGY 271
Query: 352 VNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQ 411
D+EG + R + + G NV+T+ +LIK Y K +E+ ++++ + + P+Q
Sbjct: 272 AMIGDVEGMTRVLRLMSERGVSRNVVTFTSLIKSYCKKGLMEEAEQVFELVTEKKLVPDQ 331
Query: 412 TIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGN 471
+ ++D Y +N AV + M G + N L++ + + EA ++L
Sbjct: 332 HMHGVLIDGYCRNGRICDAVRVHDYMIEMGVRTNTTICNSLINGYCKSGQLVEAEQILTR 391
Query: 472 FNHPNNEP 479
N + +P
Sbjct: 392 MNDWSLKP 399
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 62/325 (19%), Positives = 130/325 (40%), Gaps = 41/325 (12%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
LI+ K NK ++ + +G P+V ++ AL+ + G A A M G
Sbjct: 582 LISGAFKYKHLNKVADLVIELRARGLTPTVATYGALITGWCNIGMIDKAYATCFEMIEKG 641
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
+ I +KF EA + ++D F +++ Y+ +
Sbjct: 642 ITLNVNICSKIANSLFRLDKFDEACLLLQKIVD------------FDLLLPGYQSLKEFL 689
Query: 222 KARKLFALMAER---GVQQST---------VTYNSLMSFETNYKEVS---KIY-DQMQRA 265
+ L ++ V+ ST + YN ++ +++ K++ D +
Sbjct: 690 EPSATTCLKTQKIAESVENSTPKKLLVPNNIVYNVAIAGLCKAGKLTDAQKLFSDLLSSD 749
Query: 266 GLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQA 325
PD +Y +LI+ +A + +EM G+ P YN L+ G VD+A
Sbjct: 750 RFIPDEYTYTILIHGCAIDGDINKAFNLRDEMALKGIIPNIVTYNALIKGLCKLGNVDRA 809
Query: 326 RTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKG 385
+ + + + + +P+ +Y T++ + + D+ A + ++ + G L++G
Sbjct: 810 QRLLRKLPQKGTTPNAITYNTLIDGLIKSGDVAEAMRLKEKMIEKG----------LVRG 859
Query: 386 YAKVNNLEKMMEIYD---KMRVNGI 407
K +++K E+ D K+ + G+
Sbjct: 860 SYKQGDVDKPKEVLDPGVKLGITGV 884
>gi|356554658|ref|XP_003545661.1| PREDICTED: pentatricopeptide repeat-containing protein At1g22960,
mitochondrial-like [Glycine max]
Length = 675
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 99/354 (27%), Positives = 165/354 (46%), Gaps = 10/354 (2%)
Query: 106 YG--KQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPR 163
YG K G + A K+L M K P +VS+ L+ Y R G A +F ++ G
Sbjct: 303 YGLCKWGRVSDARKLLDVMVNKNLMPDLVSYNTLIYGYTRLGNIGEAFLLFAELRFRGLV 362
Query: 164 PSALTYQIILKLFVEANKFKEAEEVFMTLLDEE-KSPLKPDQKMFHMMIYMYKKAGGYEK 222
PS +TY ++ +V M L DE K PD F +++ + K G
Sbjct: 363 PSVVTYNTLIDGLCRMGDL----DVAMRLKDEMIKHGPDPDVFTFTILVRGFCKLGNLPM 418
Query: 223 ARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSKIY---DQMQRAGLQPDVVSYALLIN 279
A++LF M RG+Q Y + + E + SK + ++M G PD+++Y + I+
Sbjct: 419 AKELFDEMLNRGLQPDRFAYITRIVGELKLGDPSKAFGMQEEMLARGFPPDLITYNVFID 478
Query: 280 AYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSP 339
K +EA + ++ML G+ P H Y ++ A ++G + +AR VF M P
Sbjct: 479 GLHKLGNLKEASELVKKMLYNGLVPDHVTYTSIIHAHLMAGHLRKARAVFLEMLSKGIFP 538
Query: 340 DICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIY 399
+ +YT ++ +Y ++ A F + + G PNVITY LI G KV +++ + +
Sbjct: 539 SVVTYTVLIHSYAVRGRLKLAILHFFEMHEKGVHPNVITYNALINGLCKVRKMDQAYKFF 598
Query: 400 DKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILL 453
+M+ GI PN+ +T +++ + A+ YK+M PD + LL
Sbjct: 599 TEMQAKGISPNKYTYTILINENCNLGHWQEALRLYKDMLDREIQPDSCTHSALL 652
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 100/369 (27%), Positives = 172/369 (46%), Gaps = 10/369 (2%)
Query: 73 LKKWNVVSEVLEWLRIQSWWDF--NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPS 130
L KW VS+ + L + + + + + LI Y + G+ +A + + + +G PS
Sbjct: 305 LCKWGRVSDARKLLDVMVNKNLMPDLVSYNTLIYGYTRLGNIGEAFLLFAELRFRGLVPS 364
Query: 131 VVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFM 190
VV++ L++ R G A + M GP P T+ I+++ F + A+E+F
Sbjct: 365 VVTYNTLIDGLCRMGDLDVAMRLKDEMIKHGPDPDVFTFTILVRGFCKLGNLPMAKELFD 424
Query: 191 TLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSL---MS 247
+L+ L+PD+ + I K G KA + M RG +TYN +
Sbjct: 425 EMLNRG---LQPDRFAYITRIVGELKLGDPSKAFGMQEEMLARGFPPDLITYNVFIDGLH 481
Query: 248 FETNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHK 307
N KE S++ +M GL PD V+Y +I+A+ A +A AVF EML G+ P+
Sbjct: 482 KLGNLKEASELVKKMLYNGLVPDHVTYTSIIHAHLMAGHLRKARAVFLEMLSKGIFPSVV 541
Query: 308 AYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRL 367
Y +L+ ++A+ G + A F M P++ +Y +++ M+ A KFF +
Sbjct: 542 TYTVLIHSYAVRGRLKLAILHFFEMHEKGVHPNVITYNALINGLCKVRKMDQAYKFFTEM 601
Query: 368 KQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDF 427
+ G PN TY LI + + ++ + +Y M I+P+ + ++ NKD+
Sbjct: 602 QAKGISPNKYTYTILINENCNLGHWQEALRLYKDMLDREIQPDSCTHSALLKHL--NKDY 659
Query: 428 DSAVVWYKE 436
S VV + E
Sbjct: 660 KSHVVRHLE 668
Score = 134 bits (338), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 95/398 (23%), Positives = 175/398 (43%), Gaps = 41/398 (10%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N++ + +L+ G+ +A++++ M + G S ++ L+ Y G+ A +
Sbjct: 224 NDVTYNVLVNGLSHSGELEQAKELIQEMLRLGLEVSAYTYDPLIRGYCEKGQLDEASRLG 283
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
M S G P+ +TY I+ + + +A ++ ++++ L PD ++ +IY Y
Sbjct: 284 EEMLSRGAVPTLVTYNTIMYGLCKWGRVSDARKLLDVMVNKN---LMPDLVSYNTLIYGY 340
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSLM---------------------------- 246
+ G +A LFA + RG+ S VTYN+L+
Sbjct: 341 TRLGNIGEAFLLFAELRFRGLVPSVVTYNTLIDGLCRMGDLDVAMRLKDEMIKHGPDPDV 400
Query: 247 -SFET---------NYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEE 296
+F N +++D+M GLQPD +Y I K +A + EE
Sbjct: 401 FTFTILVRGFCKLGNLPMAKELFDEMLNRGLQPDRFAYITRIVGELKLGDPSKAFGMQEE 460
Query: 297 MLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASD 356
ML G P YN+ +D G + +A + K M + PD +YT+++ A++ A
Sbjct: 461 MLARGFPPDLITYNVFIDGLHKLGNLKEASELVKKMLYNGLVPDHVTYTSIIHAHLMAGH 520
Query: 357 MEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTT 416
+ A F + G P+V+TY LI YA L+ + + +M G+ PN +
Sbjct: 521 LRKARAVFLEMLSKGIFPSVVTYTVLIHSYAVRGRLKLAILHFFEMHEKGVHPNVITYNA 580
Query: 417 IMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLS 454
+++ K + D A ++ EM++ G P++ IL++
Sbjct: 581 LINGLCKVRKMDQAYKFFTEMQAKGISPNKYTYTILIN 618
Score = 121 bits (304), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 89/368 (24%), Positives = 170/368 (46%), Gaps = 7/368 (1%)
Query: 106 YGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAY-GRGGRYKNAEAIFRRMQSSGPRP 164
Y K+ K V M KG P + + ++ R A ++ M G RP
Sbjct: 129 YAKKSMLEKCLLVFYKMVSKGMLPDLKNCNRVLRLLRDRDSSIDVAREVYNVMVECGIRP 188
Query: 165 SALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKAR 224
+ +TY +L F + K +EA ++ LL +K P+ +++++ +G E+A+
Sbjct: 189 TVVTYNTMLDSFCKQGKVQEALQL---LLQMQKMGCLPNDVTYNVLVNGLSHSGELEQAK 245
Query: 225 KLFALMAERGVQQSTVTYNSLM---SFETNYKEVSKIYDQMQRAGLQPDVVSYALLINAY 281
+L M G++ S TY+ L+ + E S++ ++M G P +V+Y ++
Sbjct: 246 ELIQEMLRLGLEVSAYTYDPLIRGYCEKGQLDEASRLGEEMLSRGAVPTLVTYNTIMYGL 305
Query: 282 GKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDI 341
K R +A + + M++ + P +YN L+ + G + +A +F +R P +
Sbjct: 306 CKWGRVSDARKLLDVMVNKNLMPDLVSYNTLIYGYTRLGNIGEAFLLFAELRFRGLVPSV 365
Query: 342 CSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDK 401
+Y T++ D++ A + + + G P+V T+ L++G+ K+ NL E++D+
Sbjct: 366 VTYNTLIDGLCRMGDLDVAMRLKDEMIKHGPDPDVFTFTILVRGFCKLGNLPMAKELFDE 425
Query: 402 MRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADE 461
M G++P++ + T + K D A +EM + GFPPD N+ +
Sbjct: 426 MLNRGLQPDRFAYITRIVGELKLGDPSKAFGMQEEMLARGFPPDLITYNVFIDGLHKLGN 485
Query: 462 RNEANELL 469
EA+EL+
Sbjct: 486 LKEASELV 493
Score = 121 bits (304), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 96/379 (25%), Positives = 170/379 (44%), Gaps = 12/379 (3%)
Query: 78 VVSEVLEWLRIQSWWDFNEMDFLMLITAYGKQGDFNKA----EKVLSFMNKKGYAPSVVS 133
V W Q+ + +E+ + +++ + G A EKV+S + G ++
Sbjct: 63 VALRFFRWAERQTGFKRSELTYAVILDILARNGLMRSAYCVMEKVVSVKMENGVVDVLIL 122
Query: 134 HTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEA-NKFKEAEEVFMTL 192
L Y + + +F +M S G P +L+L + + A EV+ +
Sbjct: 123 DLLLW-IYAKKSMLEKCLLVFYKMVSKGMLPDLKNCNRVLRLLRDRDSSIDVAREVYNVM 181
Query: 193 LDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSL---MSFE 249
++ ++P ++ M+ + K G ++A +L M + G + VTYN L +S
Sbjct: 182 VE---CGIRPTVVTYNTMLDSFCKQGKVQEALQLLLQMQKMGCLPNDVTYNVLVNGLSHS 238
Query: 250 TNYKEVSKIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAY 309
++ ++ +M R GL+ +Y LI Y + + +EA + EEML G PT Y
Sbjct: 239 GELEQAKELIQEMLRLGLEVSAYTYDPLIRGYCEKGQLDEASRLGEEMLSRGAVPTLVTY 298
Query: 310 NILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQ 369
N ++ G V AR + M PD+ SY T++ Y ++ A F L+
Sbjct: 299 NTIMYGLCKWGRVSDARKLLDVMVNKNLMPDLVSYNTLIYGYTRLGNIGEAFLLFAELRF 358
Query: 370 DGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDS 429
G VP+V+TY TLI G ++ +L+ M + D+M +G P+ FT ++ + K +
Sbjct: 359 RGLVPSVVTYNTLIDGLCRMGDLDVAMRLKDEMIKHGPDPDVFTFTILVRGFCKLGNLPM 418
Query: 430 AVVWYKEMESCGFPPDQKA 448
A + EM + G PD+ A
Sbjct: 419 AKELFDEMLNRGLQPDRFA 437
>gi|242067351|ref|XP_002448952.1| hypothetical protein SORBIDRAFT_05g002320 [Sorghum bicolor]
gi|241934795|gb|EES07940.1| hypothetical protein SORBIDRAFT_05g002320 [Sorghum bicolor]
Length = 455
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 82/347 (23%), Positives = 166/347 (47%), Gaps = 6/347 (1%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
++ YG +G ++ +L+ M G +P+ AY + G A IF +M+ G
Sbjct: 1 MLHGYGNKGALSEMHDLLNLMVANGISPNHHIFNIFFSAYAKCGMIDKAMDIFNKMRQHG 60
Query: 162 PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYE 221
P A++Y ++ + + +AE F +++E + P+ +F ++Y +E
Sbjct: 61 LSPDAVSYGALIDALCKLGRVDDAEVKFNQMINE---GVTPNIVVFSSLVYGLCSIDKWE 117
Query: 222 KARKLFALMAERGVQQSTVTYNSLMSF---ETNYKEVSKIYDQMQRAGLQPDVVSYALLI 278
K +LF M G+ + V +N+++ E E ++ D ++ G++PDV+SY LI
Sbjct: 118 KVEELFFEMLNVGIHPNIVFFNTILCNLCKEGRVMEGQRLVDSIECMGVRPDVISYNTLI 177
Query: 279 NAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRDRCS 338
+ + A +EA + E M+ G++P +YN LL + +G +D A ++F+ M + +
Sbjct: 178 DGHCLAGTIDEASKLLEGMVSVGLKPNSFSYNTLLHGYCKAGRIDSAYSLFRKMLSNGIT 237
Query: 339 PDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEI 398
P + +Y T+L A++ + + G + TY T++ G K N +++ ++
Sbjct: 238 PGVVTYNTILHGLFQTKRFSEAKELYLNMINSGTKWGIYTYNTILNGLCKSNCVDEAFKM 297
Query: 399 YDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPD 445
+ + G++ N FT ++ A K + A+ + + + G PD
Sbjct: 298 FQSLCSKGLQLNIITFTIMIGALLKGGRKEDAMDLFAAIPANGLVPD 344
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 93/365 (25%), Positives = 176/365 (48%), Gaps = 12/365 (3%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N F + +AY K G +KA + + M + G +P VS+ AL++A + GR +AE F
Sbjct: 29 NHHIFNIFFSAYAKCGMIDKAMDIFNKMRQHGLSPDAVSYGALIDALCKLGRVDDAEVKF 88
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
+M + G P+ + + ++ +K+++ EE+F +L+ + P+ F+ ++
Sbjct: 89 NQMINEGVTPNIVVFSSLVYGLCSIDKWEKVEELFFEMLN---VGIHPNIVFFNTILCNL 145
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSLM---SFETNYKEVSKIYDQMQRAGLQPDV 271
K G + ++L + GV+ ++YN+L+ E SK+ + M GL+P+
Sbjct: 146 CKEGRVMEGQRLVDSIECMGVRPDVISYNTLIDGHCLAGTIDEASKLLEGMVSVGLKPNS 205
Query: 272 VSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKC 331
SY L++ Y KA R + A ++F +ML G+ P YN +L + +A+ ++
Sbjct: 206 FSYNTLLHGYCKAGRIDSAYSLFRKMLSNGITPGVVTYNTILHGLFQTKRFSEAKELYLN 265
Query: 332 MRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNN 391
M I +Y T+L+ ++ ++ A K F+ L G N+IT+ +I K
Sbjct: 266 MINSGTKWGIYTYNTILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFTIMIGALLKGGR 325
Query: 392 LEKMMEIYDKMRVNGIKPNQTIFTTIMDAY---GKNKDFDSAVVWYKEMESCGFPPDQKA 448
E M+++ + NG+ P+ + + + G ++FDS + ME G P+ +
Sbjct: 326 KEDAMDLFAAIPANGLVPDVVTYRVVAENLIEEGSLEEFDS---LFSAMEKNGTAPNSQM 382
Query: 449 KNILL 453
N L+
Sbjct: 383 LNALV 387
Score = 102 bits (253), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 77/293 (26%), Positives = 129/293 (44%), Gaps = 12/293 (4%)
Query: 210 MIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSK---IYDQMQRAG 266
M++ Y G + L LM G+ + +N S + K I+++M++ G
Sbjct: 1 MLHGYGNKGALSEMHDLLNLMVANGISPNHHIFNIFFSAYAKCGMIDKAMDIFNKMRQHG 60
Query: 267 LQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQAR 326
L PD VSY LI+A K R ++A F +M++ GV P ++ L+ ++
Sbjct: 61 LSPDAVSYGALIDALCKLGRVDDAEVKFNQMINEGVTPNIVVFSSLVYGLCSIDKWEKVE 120
Query: 327 TVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGY 386
+F M P+I + T+L + ++ ++ G P+VI+Y TLI G+
Sbjct: 121 ELFFEMLNVGIHPNIVFFNTILCNLCKEGRVMEGQRLVDSIECMGVRPDVISYNTLIDGH 180
Query: 387 AKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQ 446
+++ ++ + M G+KPN + T++ Y K DSA +++M S G P
Sbjct: 181 CLAGTIDEASKLLEGMVSVGLKPNSFSYNTLLHGYCKAGRIDSAYSLFRKMLSNGITPGV 240
Query: 447 KAKNILLSLAKTADERNEANELLGNFNHPNNEPGI-------NGLSIS--VDE 490
N +L +EA EL N + + GI NGL S VDE
Sbjct: 241 VTYNTILHGLFQTKRFSEAKELYLNMINSGTKWGIYTYNTILNGLCKSNCVDE 293
>gi|242049534|ref|XP_002462511.1| hypothetical protein SORBIDRAFT_02g027050 [Sorghum bicolor]
gi|241925888|gb|EER99032.1| hypothetical protein SORBIDRAFT_02g027050 [Sorghum bicolor]
Length = 643
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 108/460 (23%), Positives = 200/460 (43%), Gaps = 75/460 (16%)
Query: 114 KAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIIL 173
+A V + ++G+ PS+V++T L+ A +++ ++ +++ +G RP ++ + ++
Sbjct: 90 QAHSVFKHLMEEGHKPSLVTYTILLTALTNQRMFESIPSLLAQVELAGIRPDSIFFNALI 149
Query: 174 KLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAER 233
FVEA + EA F + + S P F+ +I Y G E+++++F +M
Sbjct: 150 NAFVEAKRMGEAINTFWKM---KHSGCHPTTSTFNTLIKGYGIVGKPEESQRVFDMMGIE 206
Query: 234 G-VQQSTVTYNSLMSF---ETNYKEVSKIYDQMQRAGLQPDVVSY--------------- 274
G ++ + TYN L+ N +E + +M+ G++PD+V+Y
Sbjct: 207 GSIKPNLTTYNILVKAWCDRRNLEEAWGVVGKMRAGGVEPDIVTYNTIASAYANNDETWR 266
Query: 275 -------------------ALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDA 315
++I Y + R EEAL ++M DAG+ P +N LL
Sbjct: 267 AEELIVEIQTRVRTSERTWGIIIGGYCRESRLEEALRCVQQMKDAGIVPNVVIFNTLLKG 326
Query: 316 FAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPN 375
F + + M + PDI +Y+ L+ + + M K F ++ + G P+
Sbjct: 327 FLDVNDMAAVNNILGLMEQFGIKPDIVTYSHQLNTFSSLGHMAKCMKVFDKMIEAGIEPD 386
Query: 376 VITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYK 435
Y L KG+ + EK ++ +M G+ PN FTT++ + D +SA+ Y+
Sbjct: 387 PQVYSILAKGFVRAKQPEKAEDLLLQMSHLGVCPNVVTFTTVISGWCSVADMESAMRVYE 446
Query: 436 EMESCGFPPD-----------------QKAKNILLSLAKTADERNEANE----------- 467
+M G P+ KA+ +L + +T + E+
Sbjct: 447 KMCKSGVYPNLRTFETLIWGYSEQKQPWKAEEVLQMMRETGVKPKESTHRLIADAWKAVG 506
Query: 468 LLGNFNHPNNEPGINGLSISVDEEDDDDDDDE---DDDDN 504
L+ N N+ N P NG ++D+ DD DD+ +DDN
Sbjct: 507 LIENINNSNGSP--NG-PYAIDKLDDSDDNCNVQISEDDN 543
Score = 140 bits (352), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 82/327 (25%), Positives = 169/327 (51%), Gaps = 8/327 (2%)
Query: 99 FLMLITAYGKQGDFNKAEKVLSFMNKKG-YAPSVVSHTALMEAYGRGGRYKNAEAIFRRM 157
F LI YG G ++++V M +G P++ ++ L++A+ + A + +M
Sbjct: 180 FNTLIKGYGIVGKPEESQRVFDMMGIEGSIKPNLTTYNILVKAWCDRRNLEEAWGVVGKM 239
Query: 158 QSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKA 217
++ G P +TY I + ++ AEE L+ E ++ ++ ++ + ++I Y +
Sbjct: 240 RAGGVEPDIVTYNTIASAYANNDETWRAEE----LIVEIQTRVRTSERTWGIIIGGYCRE 295
Query: 218 GGYEKARKLFALMAERGVQQSTVTYNSLMS--FETN-YKEVSKIYDQMQRAGLQPDVVSY 274
E+A + M + G+ + V +N+L+ + N V+ I M++ G++PD+V+Y
Sbjct: 296 SRLEEALRCVQQMKDAGIVPNVVIFNTLLKGFLDVNDMAAVNNILGLMEQFGIKPDIVTY 355
Query: 275 ALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRR 334
+ +N + + + VF++M++AG+ P + Y+IL F + ++A + M
Sbjct: 356 SHQLNTFSSLGHMAKCMKVFDKMIEAGIEPDPQVYSILAKGFVRAKQPEKAEDLLLQMSH 415
Query: 335 DRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEK 394
P++ ++TT++S + + +DME A + + ++ + G PN+ T+ TLI GY++ K
Sbjct: 416 LGVCPNVVTFTTVISGWCSVADMESAMRVYEKMCKSGVYPNLRTFETLIWGYSEQKQPWK 475
Query: 395 MMEIYDKMRVNGIKPNQTIFTTIMDAY 421
E+ MR G+KP ++ I DA+
Sbjct: 476 AEEVLQMMRETGVKPKESTHRLIADAW 502
Score = 125 bits (314), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 92/363 (25%), Positives = 167/363 (46%), Gaps = 11/363 (3%)
Query: 125 KGY-APSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFK 183
KG+ SV++ T M A + A ++F+ + G +PS +TY I+L F
Sbjct: 65 KGHTCQSVINRTRQMRALIDSNKPYQAHSVFKHLMEEGHKPSLVTYTILLTALTNQRMF- 123
Query: 184 EAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYN 243
E + L E + ++PD F+ +I + +A +A F M G +T T+N
Sbjct: 124 --ESIPSLLAQVELAGIRPDSIFFNALINAFVEAKRMGEAINTFWKMKHSGCHPTTSTFN 181
Query: 244 SLM---SFETNYKEVSKIYDQMQRAG-LQPDVVSYALLINAYGKARREEEALAVFEEMLD 299
+L+ +E +++D M G ++P++ +Y +L+ A+ R EEA V +M
Sbjct: 182 TLIKGYGIVGKPEESQRVFDMMGIEGSIKPNLTTYNILVKAWCDRRNLEEAWGVVGKMRA 241
Query: 300 AGVRPTHKAYNILLDAFAISGMVDQA-RTVFKCMRRDRCSPDICSYTTMLSAYVNASDME 358
GV P YN + A+A + +A + + R R S ++ ++ Y S +E
Sbjct: 242 GGVEPDIVTYNTIASAYANNDETWRAEELIVEIQTRVRTSER--TWGIIIGGYCRESRLE 299
Query: 359 GAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIM 418
A + +++K G VPNV+ + TL+KG+ VN++ + I M GIKP+ ++ +
Sbjct: 300 EALRCVQQMKDAGIVPNVVIFNTLLKGFLDVNDMAAVNNILGLMEQFGIKPDIVTYSHQL 359
Query: 419 DAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNE 478
+ + + + +M G PD + +IL A + +A +LL +H
Sbjct: 360 NTFSSLGHMAKCMKVFDKMIEAGIEPDPQVYSILAKGFVRAKQPEKAEDLLLQMSHLGVC 419
Query: 479 PGI 481
P +
Sbjct: 420 PNV 422
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/232 (20%), Positives = 97/232 (41%), Gaps = 41/232 (17%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + F L+ + D +L M + G P +V+++ + + G +F
Sbjct: 316 NVVIFNTLLKGFLDVNDMAAVNNILGLMEQFGIKPDIVTYSHQLNTFSSLGHMAKCMKVF 375
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
+M +G P Y I+ K FV A K P
Sbjct: 376 DKMIEAGIEPDPQVYSILAKGFVRA-----------------KQP--------------- 403
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVS---KIYDQMQRAGLQPDV 271
EKA L M+ GV + VT+ +++S + ++ ++Y++M ++G+ P++
Sbjct: 404 ------EKAEDLLLQMSHLGVCPNVVTFTTVISGWCSVADMESAMRVYEKMCKSGVYPNL 457
Query: 272 VSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVD 323
++ LI Y + ++ +A V + M + GV+P + ++ DA+ G+++
Sbjct: 458 RTFETLIWGYSEQKQPWKAEEVLQMMRETGVKPKESTHRLIADAWKAVGLIE 509
>gi|293333246|ref|NP_001169278.1| uncharacterized protein LOC100383141 [Zea mays]
gi|224028343|gb|ACN33247.1| unknown [Zea mays]
Length = 901
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 95/387 (24%), Positives = 184/387 (47%), Gaps = 7/387 (1%)
Query: 99 FLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQ 158
F LI +G G+ +AE + + M +G P ++ +M + G + + +++
Sbjct: 302 FNTLINIFGFSGNSAQAEVLFASMVIRGVKPDTKTYNVMMTVFASIGDLEGVLKYYCQIR 361
Query: 159 SSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAG 218
++G P A+TY+I+L++ E +AE+V +L K+ ++ +++ MY G
Sbjct: 362 NAGLHPDAVTYRILLQVLCERKMVHKAEDVIEGIL---KAGSFVHEQSLPVVMKMYVDLG 418
Query: 219 GYEKARKLFALMAERGVQQSTVTYNSLMSFETN---YKEVSKIYDQMQRAGLQPDVVSYA 275
++A F RG S+ ++++M ++E I+ + G + D+V Y
Sbjct: 419 LLDEAIAFFEKHC-RGKGVSSKNFSAIMDVFAGRGLWEEAEHIFCSERGDGNEKDIVEYN 477
Query: 276 LLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRRD 335
++I AYG+A++ + ++FE M ++GV YN L+ F+ G +A+ + M+
Sbjct: 478 VMIKAYGQAKQYDRVSSLFESMEESGVPSDECTYNSLIQMFSFGGFPHRAKKLLGKMKDA 537
Query: 336 RCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEKM 395
P +Y+ ++ +Y + A F +K G PNVI YG LI +A+ N+++
Sbjct: 538 GFEPKCETYSAIIRSYSRHCLVPEAIDLFNEMKASGVEPNVIVYGILIDMFAETGNVKEA 597
Query: 396 MEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSL 455
+ + + +GI PN + T+++ AY K + A Y M PD A N +L+L
Sbjct: 598 LHYSNLLEQSGISPNHIVLTSLIKAYSKFNSWKEAQDLYSRMNDMDGGPDIIASNAMLNL 657
Query: 456 AKTADERNEANELLGNFNHPNNEPGIN 482
+ EA E+ + N+ ++
Sbjct: 658 YAKLEMVTEAKEIFDSLRRNNHADAVS 684
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 77/323 (23%), Positives = 148/323 (45%), Gaps = 7/323 (2%)
Query: 98 DFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRM 157
+F ++ + +G + +AE + G +V + +++AYG+ +Y ++F M
Sbjct: 440 NFSAIMDVFAGRGLWEEAEHIFCSERGDGNEKDIVEYNVMIKAYGQAKQYDRVSSLFESM 499
Query: 158 QSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKA 217
+ SG TY ++++F A+++ + D + +P + + +I Y +
Sbjct: 500 EESGVPSDECTYNSLIQMFSFGGFPHRAKKLLGKMKD---AGFEPKCETYSAIIRSYSRH 556
Query: 218 GGYEKARKLFALMAERGVQQSTVTYNSL--MSFET-NYKEVSKIYDQMQRAGLQPDVVSY 274
+A LF M GV+ + + Y L M ET N KE + ++++G+ P+ +
Sbjct: 557 CLVPEAIDLFNEMKASGVEPNVIVYGILIDMFAETGNVKEALHYSNLLEQSGISPNHIVL 616
Query: 275 ALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMRR 334
LI AY K +EA ++ M D P A N +L+ +A MV +A+ +F +RR
Sbjct: 617 TSLIKAYSKFNSWKEAQDLYSRMNDMDGGPDIIASNAMLNLYAKLEMVTEAKEIFDSLRR 676
Query: 335 DRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNNLEK 394
+ D SYTTM Y + + + + +L++ G + + + ++ Y NL
Sbjct: 677 NN-HADAVSYTTMAYLYKSIGLLSESIRITHKLQKSGLLSDCASCNAVMACYGAKGNLRD 735
Query: 395 MMEIYDKMRVNGIKPNQTIFTTI 417
E+ +M V I P+ + F I
Sbjct: 736 CAELVHQMVVANIPPDASTFEMI 758
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/302 (20%), Positives = 137/302 (45%), Gaps = 9/302 (2%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
N + + +LI + + G+ +A + + + G +P+ + T+L++AY + +K A+ ++
Sbjct: 577 NVIVYGILIDMFAETGNVKEALHYSNLLEQSGISPNHIVLTSLIKAYSKFNSWKEAQDLY 636
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
RM P + +L L+ + EA+E+F +L + D + M Y+Y
Sbjct: 637 SRMNDMDGGPDIIASNAMLNLYAKLEMVTEAKEIFDSLRRNNHA----DAVSYTTMAYLY 692
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSLMSF---ETNYKEVSKIYDQMQRAGLQPDV 271
K G ++ ++ + + G+ + N++M+ + N ++ +++ QM A + PD
Sbjct: 693 KSIGLLSESIRITHKLQKSGLLSDCASCNAVMACYGAKGNLRDCAELVHQMVVANIPPDA 752
Query: 272 VSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKC 331
++ ++ + + + E D G + +A I+ F+++GM D A +
Sbjct: 753 STFEMIFSLLKNGHVSTKEILQLESAYDDGKKSAKQA--IIAFLFSVAGMHDAALEICGK 810
Query: 332 MRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNN 391
M + + D C++ Y ++ +E A F ++ G P+ T L Y ++
Sbjct: 811 MLMPQSTLDACAHNVCFKVYASSRKVEKAFSLFMWMRDLGLKPDTSTCNHLATCYGRLGA 870
Query: 392 LE 393
LE
Sbjct: 871 LE 872
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 71/291 (24%), Positives = 114/291 (39%), Gaps = 76/291 (26%)
Query: 265 AGLQPD-------VVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFA 317
AG+ P+ VV+Y +LI+ YGKA + + AL +F +M GV P +N L++ F
Sbjct: 251 AGVAPERPRKPKLVVTYNVLIDLYGKAGKLKNALDMFLDMPAHGVMPDTYTFNTLINIFG 310
Query: 318 ISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVI 377
SG QA +F M PD +Y M++ + + D+EG K++ +++ G P+ +
Sbjct: 311 FSGNSAQAEVLFASMVIRGVKPDTKTYNVMMTVFASIGDLEGVLKYYCQIRNAGLHPDAV 370
Query: 378 TYGTL----------------IKGYAKVNNL--EKMMEIYDKMRVN-------------- 405
TY L I+G K + E+ + + KM V+
Sbjct: 371 TYRILLQVLCERKMVHKAEDVIEGILKAGSFVHEQSLPVVMKMYVDLGLLDEAIAFFEKH 430
Query: 406 --GIKPNQTIFTTIMD-----------------------------------AYGKNKDFD 428
G + F+ IMD AYG+ K +D
Sbjct: 431 CRGKGVSSKNFSAIMDVFAGRGLWEEAEHIFCSERGDGNEKDIVEYNVMIKAYGQAKQYD 490
Query: 429 SAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNNEP 479
++ ME G P D+ N L+ + + A +LLG EP
Sbjct: 491 RVSSLFESMEESGVPSDECTYNSLIQMFSFGGFPHRAKKLLGKMKDAGFEP 541
Score = 62.0 bits (149), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 50/236 (21%), Positives = 95/236 (40%), Gaps = 15/236 (6%)
Query: 261 QMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNIL---LDA-- 315
M+ G+ PD VS + R ++ALA+F D + + LD
Sbjct: 175 HMRTRGVAPDEVSMNTFVRILKDEGRHDDALALFHSWCDGRFEVDFLDLDCITVDLDGPM 234
Query: 316 -FAISGMVD---QARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDG 371
F ++ M D A R R + +Y ++ Y A ++ A F + G
Sbjct: 235 QFLLADMYDDKIAAPAAGVAPERPRKPKLVVTYNVLIDLYGKAGKLKNALDMFLDMPAHG 294
Query: 372 FVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAV 431
+P+ T+ TLI + N + ++ M + G+KP+ + +M + D + +
Sbjct: 295 VMPDTYTFNTLINIFGFSGNSAQAEVLFASMVIRGVKPDTKTYNVMMTVFASIGDLEGVL 354
Query: 432 VWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELL------GNFNHPNNEPGI 481
+Y ++ + G PD ILL + ++A +++ G+F H + P +
Sbjct: 355 KYYCQIRNAGLHPDAVTYRILLQVLCERKMVHKAEDVIEGILKAGSFVHEQSLPVV 410
>gi|414591138|tpg|DAA41709.1| TPA: hypothetical protein ZEAMMB73_028111 [Zea mays]
Length = 583
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 86/374 (22%), Positives = 179/374 (47%), Gaps = 8/374 (2%)
Query: 94 FNEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAI 153
N + + L+ Y +Q D + +++L M +G +V ++T L+++ EA+
Sbjct: 210 LNALCYNSLLDCYVRQKDDGRVQEILEIMENEGIEATVGTYTILVDSLSTARDISKVEAL 269
Query: 154 FRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDE-EKSPLKPDQKMFHMMIY 212
F M+++ Y ++ + A + A +V LDE + ++P+++ + ++I
Sbjct: 270 FNEMKANNVVGDVYLYTAVINAYCRAGNMRRAAKV----LDECVGNGVEPNERTYGVLIN 325
Query: 213 MYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVS---KIYDQMQRAGLQP 269
+ K G E A L A M +GV + + +N+++ V KI M++ G++
Sbjct: 326 GFCKIGQMEAAEMLLADMQGQGVGLNQIIFNTMIDGYCRKGMVDDALKIKAAMEKMGVEL 385
Query: 270 DVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVF 329
D+ +Y L + R +EA + M++ GV P + Y L+ G + +AR +F
Sbjct: 386 DIYTYNTLACGLCRVNRLDEAKTLLHIMIEMGVVPNYVTYTTLISIHCKDGDMVEARRLF 445
Query: 330 KCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKV 389
+ M +P + +Y M+ Y + AE+F + +++ GFVP+V TY +L+ G+
Sbjct: 446 REMAEKGATPSVVTYNVMIDGYTKKGSIREAERFRKEMEKKGFVPDVYTYASLVHGHCVN 505
Query: 390 NNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCGFPPDQKAK 449
++ ++++++M+ G +PN +T ++ K ++A Y +M G PD
Sbjct: 506 GKVDVALKLFEEMKQRGTEPNVVAYTALISGLAKEGRSEAAFQLYDDMLKAGLIPDDSLY 565
Query: 450 NILLSLAKTADERN 463
+ L+ T + ++
Sbjct: 566 SALVGSLHTDNRKD 579
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 98/213 (46%)
Query: 257 KIYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAF 316
++ D M R G+ + + Y L++ Y + + + + E M + G+ T Y IL+D+
Sbjct: 198 RLLDDMPRHGVSLNALCYNSLLDCYVRQKDDGRVQEILEIMENEGIEATVGTYTILVDSL 257
Query: 317 AISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNV 376
+ + + + +F M+ + D+ YT +++AY A +M A K +G PN
Sbjct: 258 STARDISKVEALFNEMKANNVVGDVYLYTAVINAYCRAGNMRRAAKVLDECVGNGVEPNE 317
Query: 377 ITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKE 436
TYG LI G+ K+ +E + M+ G+ NQ IF T++D Y + D A+
Sbjct: 318 RTYGVLINGFCKIGQMEAAEMLLADMQGQGVGLNQIIFNTMIDGYCRKGMVDDALKIKAA 377
Query: 437 MESCGFPPDQKAKNILLSLAKTADERNEANELL 469
ME G D N L + +EA LL
Sbjct: 378 MEKMGVELDIYTYNTLACGLCRVNRLDEAKTLL 410
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/276 (23%), Positives = 118/276 (42%), Gaps = 38/276 (13%)
Query: 216 KAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKE---VSKIYDQMQRAGLQPDVV 272
K+G + AR+L M GV + + YNSL+ K+ V +I + M+ G++ V
Sbjct: 189 KSGRVDDARRLLDDMPRHGVSLNALCYNSLLDCYVRQKDDGRVQEILEIMENEGIEATVG 248
Query: 273 SYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCM 332
+Y +L+++ AR + A+F EM V Y +++A+ +G + +A V
Sbjct: 249 TYTILVDSLSTARDISKVEALFNEMKANNVVGDVYLYTAVINAYCRAGNMRRAAKVLDEC 308
Query: 333 RRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAK---V 389
+ P+ +Y +++ + ME AE ++ G N I + T+I GY + V
Sbjct: 309 VGNGVEPNERTYGVLINGFCKIGQMEAAEMLLADMQGQGVGLNQIIFNTMIDGYCRKGMV 368
Query: 390 NNLEKMMEIYDKM-----------------RVN---------------GIKPNQTIFTTI 417
++ K+ +KM RVN G+ PN +TT+
Sbjct: 369 DDALKIKAAMEKMGVELDIYTYNTLACGLCRVNRLDEAKTLLHIMIEMGVVPNYVTYTTL 428
Query: 418 MDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILL 453
+ + K+ D A ++EM G P N+++
Sbjct: 429 ISIHCKDGDMVEARRLFREMAEKGATPSVVTYNVMI 464
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 42/196 (21%), Positives = 93/196 (47%), Gaps = 4/196 (2%)
Query: 262 MQRA-GLQPDVVS---YALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFA 317
++RA G P VS +++++ K+ R ++A + ++M GV YN LLD +
Sbjct: 164 LERALGSCPGSVSPLAASVVVDGLCKSGRVDDARRLLDDMPRHGVSLNALCYNSLLDCYV 223
Query: 318 ISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVI 377
+ + + + M + + +YT ++ + A D+ E F +K + V +V
Sbjct: 224 RQKDDGRVQEILEIMENEGIEATVGTYTILVDSLSTARDISKVEALFNEMKANNVVGDVY 283
Query: 378 TYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEM 437
Y +I Y + N+ + ++ D+ NG++PN+ + +++ + K ++A + +M
Sbjct: 284 LYTAVINAYCRAGNMRRAAKVLDECVGNGVEPNERTYGVLINGFCKIGQMEAAEMLLADM 343
Query: 438 ESCGFPPDQKAKNILL 453
+ G +Q N ++
Sbjct: 344 QGQGVGLNQIIFNTMI 359
>gi|168056841|ref|XP_001780426.1| predicted protein [Physcomitrella patens subsp. patens]
gi|54695174|dbj|BAD67152.1| PpPPR_38 [Physcomitrella patens]
gi|162668102|gb|EDQ54716.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 513
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 90/331 (27%), Positives = 153/331 (46%), Gaps = 24/331 (7%)
Query: 97 MDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRR 156
+ + LI +GK +NK V S M + P + T L+ YG GG AE+ +
Sbjct: 181 VSYTALIQGFGKLKSYNKVTDVFSRMQRNRCPPDLKLCTVLISTYGNGGLPVLAESAMQY 240
Query: 157 MQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKK 216
Q+ G +P A+ Y ++ + + ++EAE+ +LD D + + ++ Y K
Sbjct: 241 AQAQGLQPDAIAYTALVHAYAQEGLWEEAEKTLSDMLDVGIV----DDRPYAALVAAYGK 296
Query: 217 AGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYKEVSK---IYDQMQRAGLQPDVVS 273
AG + K+ M GV+ ST YN+L++ + + K + MQ G Q D ++
Sbjct: 297 AGLTDNVNKILETMKASGVEASTTLYNTLINIHSKAEAPEKARAVLQLMQADGCQCDEIT 356
Query: 274 YALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKCMR 333
Y ++ AY + ++ A ++ EM AG++P +Y +L+ A+ +G + A + + M+
Sbjct: 357 YTSVMEAYSRNKQPLMAESMMGEMKRAGIQPGPVSYGVLISAYCRAGRLGDAERILRAMQ 416
Query: 334 RDRCSPDICSYTTMLSAYVNASDMEGAEKFFR-----------------RLKQDGFVPNV 376
+C P + Y M+S Y +A AE+ F+ R++Q G PN
Sbjct: 417 NAKCKPTVEIYNMMISGYASAKMRSQAERMFQTMQDCGLRPDAAEDCYIRMQQLGCKPNA 476
Query: 377 ITYGTLIKGYAKVNNLEKMMEIYDKMRVNGI 407
+TY L+K Y NN I MR GI
Sbjct: 477 VTYKILLKAYTDYNNSIDAERIRLDMRKAGI 507
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 80/304 (26%), Positives = 139/304 (45%), Gaps = 7/304 (2%)
Query: 145 GRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQ 204
GR ++A IF+R + +G +P ++Y +++ F + + + +VF + + + P PD
Sbjct: 159 GRMRDAMTIFKRFEGAGLKPDVVSYTALIQGFGKLKSYNKVTDVF-SRMQRNRCP--PDL 215
Query: 205 KMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLM---SFETNYKEVSKIYDQ 261
K+ ++I Y G A +G+Q + Y +L+ + E ++E K
Sbjct: 216 KLCTVLISTYGNGGLPVLAESAMQYAQAQGLQPDAIAYTALVHAYAQEGLWEEAEKTLSD 275
Query: 262 MQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGM 321
M G+ D YA L+ AYGKA + + E M +GV + YN L++ + +
Sbjct: 276 MLDVGIVDDR-PYAALVAAYGKAGLTDNVNKILETMKASGVEASTTLYNTLINIHSKAEA 334
Query: 322 VDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGT 381
++AR V + M+ D C D +YT+++ AY AE +K+ G P ++YG
Sbjct: 335 PEKARAVLQLMQADGCQCDEITYTSVMEAYSRNKQPLMAESMMGEMKRAGIQPGPVSYGV 394
Query: 382 LIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEMESCG 441
LI Y + L I M+ KP I+ ++ Y K A ++ M+ CG
Sbjct: 395 LISAYCRAGRLGDAERILRAMQNAKCKPTVEIYNMMISGYASAKMRSQAERMFQTMQDCG 454
Query: 442 FPPD 445
PD
Sbjct: 455 LRPD 458
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 84/182 (46%), Gaps = 24/182 (13%)
Query: 95 NEMDFLMLITAYGKQGDFNKAEKVLSFMNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIF 154
+E+ + ++ AY + AE ++ M + G P VS+ L+ AY R GR +AE I
Sbjct: 353 DEITYTSVMEAYSRNKQPLMAESMMGEMKRAGIQPGPVSYGVLISAYCRAGRLGDAERIL 412
Query: 155 RRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMY 214
R MQ++ +P+ Y +++ + A +AE +F T+ D L+PD
Sbjct: 413 RAMQNAKCKPTVEIYNMMISGYASAKMRSQAERMFQTMQD---CGLRPD----------- 458
Query: 215 KKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETNYK---EVSKIYDQMQRAGLQPDV 271
A + M + G + + VTY L+ T+Y + +I M++AG+ +
Sbjct: 459 -------AAEDCYIRMQQLGCKPNAVTYKILLKAYTDYNNSIDAERIRLDMRKAGISLET 511
Query: 272 VS 273
+S
Sbjct: 512 LS 513
Score = 39.7 bits (91), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 21/88 (23%), Positives = 41/88 (46%)
Query: 367 LKQDGFVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKD 426
L+ D + +V Y + + K + M I+ + G+KP+ +T ++ +GK K
Sbjct: 136 LEDDSQLNSVKDYNSALLNCVKDGRMRDAMTIFKRFEGAGLKPDVVSYTALIQGFGKLKS 195
Query: 427 FDSAVVWYKEMESCGFPPDQKAKNILLS 454
++ + M+ PPD K +L+S
Sbjct: 196 YNKVTDVFSRMQRNRCPPDLKLCTVLIS 223
>gi|242054883|ref|XP_002456587.1| hypothetical protein SORBIDRAFT_03g038900 [Sorghum bicolor]
gi|241928562|gb|EES01707.1| hypothetical protein SORBIDRAFT_03g038900 [Sorghum bicolor]
Length = 655
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 104/396 (26%), Positives = 190/396 (47%), Gaps = 28/396 (7%)
Query: 103 ITAYGKQGDFNKAEKVLSF-MNKKGYAPSVVSHTALMEAYGRGGRYKNAEAIFRRMQSSG 161
+ AY K A+++L M G AP +++ ++ A R GR+ A ++F M++
Sbjct: 232 VAAYCKSDLIRDAKRLLLHDMPADGVAPDAETYSPILAALARRGRHLAAVSLFSHMRAVA 291
Query: 162 -PRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIYMYKKAGGY 220
+P + IIL + + + +EA+ +F ++ ++ + P ++ M+ +Y AG +
Sbjct: 292 RVKPDLSVFNIILNAYGQLDLAREADRLFWSM---RRAGVPPSVVTYNTMLRVYGDAGLF 348
Query: 221 EKARKLFALM---------AERGVQQSTVTYNSLMSFETNYKE---VSKIYDQMQRAGLQ 268
+A LF LM A V+ + VTYN++++ E K+ MQ G+Q
Sbjct: 349 GEAVHLFDLMRSASDGNGGAGSSVKPNVVTYNTMIAIYGKSLEDEKAGKLVQDMQAIGVQ 408
Query: 269 PDVVSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTV 328
PD ++Y+ +++ + KA + + A +FE++ +AG Y ++ A+ +G+V QA+ +
Sbjct: 409 PDAITYSTILSIWVKAGKLDRAAKLFEKLREAGTEIDPVLYQTMVVAYERAGLVSQAKRL 468
Query: 329 FKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAK 388
RD P+ T + +A +E A FRR G + + + ++ YAK
Sbjct: 469 L----RDLKDPEGIPKETAIKILASAGRLEEAAWLFRRAANTGEIKDSSVHRAMMDLYAK 524
Query: 389 VNNLEKMMEIYDKMRVNGIKPNQTIFTTIMDAYGKNKDFDSAVVWYKEM--ESCGFPPDQ 446
++E++D+MR G P+ T M+AYGK KDFD A Y+ M E C F
Sbjct: 525 NRRHRNVIEVFDEMRKLGQLPDSETIATAMNAYGKLKDFDKAAALYQAMREEGCVF--SD 582
Query: 447 KAKNILLSLAKTADERNEANELLGNFNHPNNEPGIN 482
+ ++SL + L+G +H +P I+
Sbjct: 583 RVHFQMISLLGAQKDFKALEVLVGELSH---DPSID 615
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 88/369 (23%), Positives = 160/369 (43%), Gaps = 17/369 (4%)
Query: 132 VSHTALMEAYGRGGRYKNAEAIFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMT 191
+ + L+ + R G + A + M+ G P A +Y +L A A F+
Sbjct: 121 IPYNLLLRSSCRAGDLRLASGLLLEMRERGVTPDAFSYSTLLAALTRAGHLDHAL-TFLP 179
Query: 192 LLDEEKSPLKPDQKMFHMMIYMYKKAGGYEKARKLFALMAERGVQQSTVTYNSLMSFETN 251
L++++ + PD +F +I++ + G KA LF+ + G++ YN+ ++
Sbjct: 180 LMEDDA--VAPDLILFSNLIHLALRGGDAPKALALFSRLRAAGIRPDLKAYNAAVAAYCK 237
Query: 252 YKEVSK----IYDQMQRAGLQPDVVSYALLINAYGKARREEEALAVFEEMLD-AGVRPTH 306
+ + M G+ PD +Y+ ++ A + R A+++F M A V+P
Sbjct: 238 SDLIRDAKRLLLHDMPADGVAPDAETYSPILAALARRGRHLAAVSLFSHMRAVARVKPDL 297
Query: 307 KAYNILLDAFAISGMVDQARTVFKCMRRDRCSPDICSYTTMLSAYVNASDMEGAEKFF-- 364
+NI+L+A+ + +A +F MRR P + +Y TML Y +A A F
Sbjct: 298 SVFNIILNAYGQLDLAREADRLFWSMRRAGVPPSVVTYNTMLRVYGDAGLFGEAVHLFDL 357
Query: 365 RRLKQDG-------FVPNVITYGTLIKGYAKVNNLEKMMEIYDKMRVNGIKPNQTIFTTI 417
R DG PNV+TY T+I Y K EK ++ M+ G++P+ ++TI
Sbjct: 358 MRSASDGNGGAGSSVKPNVVTYNTMIAIYGKSLEDEKAGKLVQDMQAIGVQPDAITYSTI 417
Query: 418 MDAYGKNKDFDSAVVWYKEMESCGFPPDQKAKNILLSLAKTADERNEANELLGNFNHPNN 477
+ + K D A ++++ G D ++ + A ++A LL + P
Sbjct: 418 LSIWVKAGKLDRAAKLFEKLREAGTEIDPVLYQTMVVAYERAGLVSQAKRLLRDLKDPEG 477
Query: 478 EPGINGLSI 486
P + I
Sbjct: 478 IPKETAIKI 486
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 67/312 (21%), Positives = 133/312 (42%), Gaps = 15/312 (4%)
Query: 102 LITAYGKQGDFNKAEKVLSFMNK---------KGYAPSVVSHTALMEAYGRGGRYKNAEA 152
++ YG G F +A + M P+VV++ ++ YG+ + A
Sbjct: 338 MLRVYGDAGLFGEAVHLFDLMRSASDGNGGAGSSVKPNVVTYNTMIAIYGKSLEDEKAGK 397
Query: 153 IFRRMQSSGPRPSALTYQIILKLFVEANKFKEAEEVFMTLLDEEKSPLKPDQKMFHMMIY 212
+ + MQ+ G +P A+TY IL ++V+A K A ++F L ++ + D ++ M+
Sbjct: 398 LVQDMQAIGVQPDAITYSTILSIWVKAGKLDRAAKLFEKL---REAGTEIDPVLYQTMVV 454
Query: 213 MYKKAGGYEKARKLFA-LMAERGVQQSTVTYNSLMSFETNYKEVSKIYDQMQRAGLQPDV 271
Y++AG +A++L L G+ + T +++ +E + ++ + G D
Sbjct: 455 AYERAGLVSQAKRLLRDLKDPEGIPKETAI--KILASAGRLEEAAWLFRRAANTGEIKDS 512
Query: 272 VSYALLINAYGKARREEEALAVFEEMLDAGVRPTHKAYNILLDAFAISGMVDQARTVFKC 331
+ +++ Y K RR + VF+EM G P + ++A+ D+A +++
Sbjct: 513 SVHRAMMDLYAKNRRHRNVIEVFDEMRKLGQLPDSETIATAMNAYGKLKDFDKAAALYQA 572
Query: 332 MRRDRCSPDICSYTTMLSAYVNASDMEGAEKFFRRLKQDGFVPNVITYGTLIKGYAKVNN 391
MR + C + M+S D + E L D + Y Y +
Sbjct: 573 MREEGCVFSDRVHFQMISLLGAQKDFKALEVLVGELSHDPSIDKRELYLVAAGVYERAYK 632
Query: 392 LEKMMEIYDKMR 403
+K I +++R
Sbjct: 633 FDKASHIINQIR 644
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.317 0.134 0.388
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,848,204,670
Number of Sequences: 23463169
Number of extensions: 400798859
Number of successful extensions: 4339237
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 16368
Number of HSP's successfully gapped in prelim test: 9291
Number of HSP's that attempted gapping in prelim test: 3537050
Number of HSP's gapped (non-prelim): 356114
length of query: 557
length of database: 8,064,228,071
effective HSP length: 148
effective length of query: 409
effective length of database: 8,886,646,355
effective search space: 3634638359195
effective search space used: 3634638359195
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 80 (35.4 bits)