Your job contains 1 sequence.
>008709
MGQMDSYEKDFEEHMLQDTGAYYSRKASNWILEDSCPEYMIKAEECLKKERDRVSHYLHS
SSEPKLVEKVQHELLVVYATELLEKEQSGCRALLREDKVEDLSRMYRLYHKIPKGLEPVA
NVFKQHITAEGTVLVQQAEDAATNQGGSSGAVQEQVLIRKIIELHDKYMEYVTNCFINHT
LFHKALKEAFEIFCNKAVGGSSSSELLATFCDNILKKGGNEKLSDEAIEETLEKVVKLLA
YISDKDLFAEFYRKKLARRLLFDRSANDDHERSILTKLKQQCGGQFTSKMEGMVTDLTLA
RENQTSFEEYLSNNQNAHPGIDLSVTVLTTGFWPSYKSSDLNLPSEMVKCVEVFKGFYET
KTKHRKLTWIYSLGQCNINGKFEQKNIELIVSTYQAATLLLFNTSDRLSYSEIMTQLNLT
HDDLVRLLHSLSCAKYKILLKEPNTKTISQSDHFEFNSKFTDRMRRIKIPLPPVDERKKI
VEDVDKDRRYAIDAALVRIMKSRKVLGHQQLVSECVEQLSRMFKPDIKAIKKRMEDLITR
DYLERDKENPNMFRYLA
The BLAST search returned 3 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 008709
(557 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2132377 - symbol:CUL1 "cullin 1" species:3702 ... 2568 5.5e-267 1
TAIR|locus:2024755 - symbol:CUL2 "cullin 2" species:3702 ... 2092 1.5e-216 1
TAIR|locus:2018645 - symbol:AT1G43140 species:3702 "Arabi... 1052 3.3e-208 2
DICTYBASE|DDB_G0284903 - symbol:culC "cullin C" species:4... 799 3.2e-104 2
TAIR|locus:2200670 - symbol:CUL3 "AT1G26830" species:3702... 914 1.0e-91 1
UNIPROTKB|Q6DE95 - symbol:cul3a "Cullin-3-A" species:8355... 571 1.5e-89 2
UNIPROTKB|Q6GPF3 - symbol:cul3b "Cullin-3-B" species:8355... 572 3.0e-89 2
ZFIN|ZDB-GENE-081007-1 - symbol:cul3b "cullin 3b" species... 572 3.0e-89 2
FB|FBgn0261268 - symbol:Cul-3 "Cullin-3" species:7227 "Dr... 602 3.3e-89 2
UNIPROTKB|E1BYQ3 - symbol:CUL3 "Uncharacterized protein" ... 572 3.9e-89 2
UNIPROTKB|A4IHP4 - symbol:cul3 "Cullin-3" species:8364 "X... 571 3.9e-89 2
UNIPROTKB|E1BIN5 - symbol:CUL3 "Uncharacterized protein" ... 569 8.0e-89 2
UNIPROTKB|F1PU58 - symbol:CUL3 "Uncharacterized protein" ... 569 8.0e-89 2
RGD|1308190 - symbol:Cul3 "cullin 3" species:10116 "Rattu... 569 8.0e-89 2
ZFIN|ZDB-GENE-030131-3376 - symbol:cul3a "cullin 3a" spec... 572 1.0e-88 2
UNIPROTKB|Q13618 - symbol:CUL3 "Cullin-3" species:9606 "H... 568 1.0e-88 2
MGI|MGI:1347360 - symbol:Cul3 "cullin 3" species:10090 "M... 566 1.7e-88 2
TAIR|locus:2162060 - symbol:CUL4 "cullin4" species:3702 "... 763 2.1e-88 2
UNIPROTKB|E1BQK9 - symbol:CUL4B "Uncharacterized protein"... 873 2.3e-87 1
FB|FBgn0033260 - symbol:Cul-4 "Cullin-4" species:7227 "Dr... 856 1.4e-85 1
UNIPROTKB|F1SR61 - symbol:LOC100511787 "Uncharacterized p... 534 4.0e-85 2
ZFIN|ZDB-GENE-041008-208 - symbol:cul4b "cullin 4B" speci... 848 1.0e-84 1
UNIPROTKB|F1P2U1 - symbol:CUL4A "Uncharacterized protein"... 835 2.4e-83 1
UNIPROTKB|E1BFD5 - symbol:CUL4B "Uncharacterized protein"... 834 3.1e-83 1
UNIPROTKB|E2RMN1 - symbol:CUL4B "Uncharacterized protein"... 834 3.1e-83 1
UNIPROTKB|K4DI93 - symbol:CUL4B "Cullin 4B, isoform CRA_e... 834 3.1e-83 1
UNIPROTKB|Q13620 - symbol:CUL4B "Cullin-4B" species:9606 ... 834 3.1e-83 1
MGI|MGI:1919834 - symbol:Cul4b "cullin 4B" species:10090 ... 833 3.9e-83 1
UNIPROTKB|G3N0Q3 - symbol:G3N0Q3 "Uncharacterized protein... 833 3.9e-83 1
UNIPROTKB|Q13619 - symbol:CUL4A "Cullin-4A" species:9606 ... 828 1.3e-82 1
DICTYBASE|DDB_G0291972 - symbol:culA "cullin A" species:4... 821 7.4e-82 1
UNIPROTKB|F1Q284 - symbol:CUL4A "Uncharacterized protein"... 816 2.5e-81 1
MGI|MGI:1914487 - symbol:Cul4a "cullin 4A" species:10090 ... 812 6.6e-81 1
UNIPROTKB|F1N3S4 - symbol:CUL4A "Uncharacterized protein"... 811 8.5e-81 1
UNIPROTKB|F1RN43 - symbol:CUL4A "Uncharacterized protein"... 808 1.8e-80 1
ZFIN|ZDB-GENE-040426-2887 - symbol:cul1b "cullin 1b" spec... 808 1.8e-80 1
UNIPROTKB|E1C0W8 - symbol:CUL1 "Uncharacterized protein" ... 807 2.2e-80 1
UNIPROTKB|F1MYD0 - symbol:CUL1 "Uncharacterized protein" ... 807 2.2e-80 1
UNIPROTKB|E2R1V2 - symbol:CUL1 "Uncharacterized protein" ... 807 2.2e-80 1
UNIPROTKB|Q13616 - symbol:CUL1 "Cullin-1" species:9606 "H... 807 2.2e-80 1
UNIPROTKB|Q5R4G6 - symbol:CUL1 "Cullin-1" species:9601 "P... 807 2.2e-80 1
MGI|MGI:1349658 - symbol:Cul1 "cullin 1" species:10090 "M... 807 2.2e-80 1
RGD|1308157 - symbol:Cul1 "cullin 1" species:10116 "Rattu... 807 2.2e-80 1
ZFIN|ZDB-GENE-030131-2603 - symbol:cul1a "cullin 1a" spec... 801 9.7e-80 1
UNIPROTKB|F1SAD7 - symbol:CUL1 "Uncharacterized protein" ... 793 6.8e-79 1
RGD|1564494 - symbol:Cul4b "cullin 4B" species:10116 "Rat... 517 1.0e-78 2
POMBASE|SPAC24H6.03 - symbol:cul3 "cullin 3" species:4896... 780 1.6e-77 1
TAIR|locus:2205020 - symbol:CUL3B "AT1G69670" species:370... 770 1.9e-76 1
DICTYBASE|DDB_G0292794 - symbol:culD "cullin D" species:4... 437 8.1e-76 3
DICTYBASE|DDB_G0267384 - symbol:culB "cullin B" species:4... 602 3.7e-74 2
UNIPROTKB|E2QRU7 - symbol:CUL2 "Uncharacterized protein" ... 747 5.1e-74 1
UNIPROTKB|Q13617 - symbol:CUL2 "Cullin-2" species:9606 "H... 746 6.5e-74 1
UNIPROTKB|Q5T2B7 - symbol:CUL2 "Cullin-2" species:9606 "H... 746 6.5e-74 1
UNIPROTKB|Q08DE9 - symbol:CUL2 "Uncharacterized protein" ... 745 8.4e-74 1
MGI|MGI:1918995 - symbol:Cul2 "cullin 2" species:10090 "M... 732 2.0e-72 1
WB|WBGene00000838 - symbol:cul-3 species:6239 "Caenorhabd... 482 2.1e-72 2
UNIPROTKB|Q17391 - symbol:cul-3 "Cullin-3" species:6239 "... 482 2.1e-72 2
UNIPROTKB|F1N829 - symbol:CUL2 "Uncharacterized protein" ... 731 2.5e-72 1
WB|WBGene00000836 - symbol:cul-1 species:6239 "Caenorhabd... 728 5.3e-72 1
ZFIN|ZDB-GENE-030131-8032 - symbol:cul2 "cullin 2" specie... 727 6.7e-72 1
ASPGD|ASPL0000060435 - symbol:culA species:162425 "Emeric... 725 1.1e-71 1
POMBASE|SPAC17G6.12 - symbol:cul1 "cullin 1" species:4896... 723 1.8e-71 1
FB|FBgn0015509 - symbol:lin19 "lin-19-like" species:7227 ... 717 7.7e-71 1
UNIPROTKB|I3L5M8 - symbol:LOC100739075 "Uncharacterized p... 701 3.8e-69 1
ASPGD|ASPL0000014731 - symbol:culC species:162425 "Emeric... 417 1.7e-68 2
FB|FBgn0032956 - symbol:Cul-2 "Cullin-2" species:7227 "Dr... 684 2.4e-67 1
ASPGD|ASPL0000052453 - symbol:culD species:162425 "Emeric... 678 1.1e-66 1
WB|WBGene00000837 - symbol:cul-2 species:6239 "Caenorhabd... 419 5.4e-66 2
UNIPROTKB|Q17390 - symbol:cul-2 "Cullin-2" species:6239 "... 419 5.4e-66 2
UNIPROTKB|F1RUR7 - symbol:CUL2 "Uncharacterized protein" ... 665 2.5e-65 1
DICTYBASE|DDB_G0278991 - symbol:culE "cullin E" species:4... 637 2.3e-62 1
POMBASE|SPAC3A11.08 - symbol:pcu4 "cullin 4" species:4896... 613 8.1e-60 1
WB|WBGene00000841 - symbol:cul-6 species:6239 "Caenorhabd... 604 7.3e-59 1
UNIPROTKB|Q5T2B5 - symbol:CUL2 "Cullin-2" species:9606 "H... 603 9.3e-59 1
WB|WBGene00000839 - symbol:cul-4 species:6239 "Caenorhabd... 602 1.2e-58 1
UNIPROTKB|G4N0J9 - symbol:MGG_07731 "Cullin-3" species:24... 346 1.5e-58 2
RGD|1310644 - symbol:Cul2 "cullin 2" species:10116 "Rattu... 591 1.7e-57 1
UNIPROTKB|K7GPT4 - symbol:LOC100739075 "Uncharacterized p... 583 1.2e-56 1
ZFIN|ZDB-GENE-040426-1357 - symbol:cul4a "cullin 4A" spec... 579 3.3e-56 1
UNIPROTKB|F1P2W9 - symbol:CUL2 "Uncharacterized protein" ... 576 6.8e-56 1
UNIPROTKB|D4A0H4 - symbol:Cul2 "Cullin 2 (Predicted), iso... 567 6.1e-55 1
TAIR|locus:2025881 - symbol:AT1G59790 species:3702 "Arabi... 552 2.4e-53 1
UNIPROTKB|F1N7B5 - symbol:CUL5 "Uncharacterized protein" ... 419 4.0e-50 2
UNIPROTKB|J9PAX0 - symbol:CUL5 "Uncharacterized protein" ... 419 4.0e-50 2
UNIPROTKB|Q93034 - symbol:CUL5 "Cullin-5" species:9606 "H... 419 4.9e-50 2
UNIPROTKB|I3LFR2 - symbol:CUL5 "Uncharacterized protein" ... 419 4.9e-50 2
UNIPROTKB|F1P0F9 - symbol:CUL5 "Uncharacterized protein" ... 420 5.9e-50 2
MGI|MGI:1922967 - symbol:Cul5 "cullin 5" species:10090 "M... 419 6.3e-50 2
RGD|621742 - symbol:Cul5 "cullin 5" species:10116 "Rattus... 417 2.2e-49 2
UNIPROTKB|Q9JJ31 - symbol:Cul5 "Cullin-5" species:10116 "... 417 2.2e-49 2
CGD|CAL0000107 - symbol:CDC53 species:5476 "Candida albic... 515 3.1e-49 1
UNIPROTKB|Q5AJB7 - symbol:CDC53 "Putative uncharacterized... 515 3.1e-49 1
WB|WBGene00000840 - symbol:cul-5 species:6239 "Caenorhabd... 429 4.2e-49 2
ZFIN|ZDB-GENE-030131-5426 - symbol:cul5a "cullin 5a" spec... 398 3.6e-45 2
FB|FBgn0039632 - symbol:Cul-5 "Cullin-5" species:7227 "Dr... 447 2.3e-41 1
UNIPROTKB|F1SR60 - symbol:F1SR60 "Uncharacterized protein... 337 4.1e-41 2
SGD|S000002290 - symbol:CDC53 "Cullin" species:4932 "Sacc... 345 1.7e-38 2
ZFIN|ZDB-GENE-091113-45 - symbol:cul5b "cullin 5b" specie... 329 1.1e-35 2
SGD|S000003235 - symbol:CUL3 "Ubiquitin-protein ligase" s... 393 2.5e-34 1
FB|FBgn0036332 - symbol:CG11261 species:7227 "Drosophila ... 372 7.2e-32 1
WARNING: Descriptions of 21 database sequences were not reported due to the
limiting value of parameter V = 100.
>TAIR|locus:2132377 [details] [associations]
symbol:CUL1 "cullin 1" species:3702 "Arabidopsis
thaliana" [GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0031625
"ubiquitin protein ligase binding" evidence=IEA] [GO:0000151
"ubiquitin ligase complex" evidence=IPI] [GO:0009733 "response to
auxin stimulus" evidence=IMP] [GO:0009793 "embryo development
ending in seed dormancy" evidence=IMP] [GO:0005819 "spindle"
evidence=IDA] [GO:0009524 "phragmoplast" evidence=IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0000794 "condensed nuclear
chromosome" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0009753 "response to jasmonic acid stimulus" evidence=IMP]
[GO:0009867 "jasmonic acid mediated signaling pathway"
evidence=TAS] [GO:0010265 "SCF complex assembly" evidence=IPI]
[GO:0042752 "regulation of circadian rhythm" evidence=RCA;IMP]
[GO:0005829 "cytosol" evidence=IDA] [GO:0000278 "mitotic cell
cycle" evidence=RCA] [GO:0006396 "RNA processing" evidence=RCA]
[GO:0006486 "protein glycosylation" evidence=RCA] [GO:0006499
"N-terminal protein myristoylation" evidence=RCA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=RCA]
[GO:0006888 "ER to Golgi vesicle-mediated transport" evidence=RCA]
[GO:0007062 "sister chromatid cohesion" evidence=RCA] [GO:0009790
"embryo development" evidence=RCA] [GO:0009880 "embryonic pattern
specification" evidence=RCA] [GO:0010072 "primary shoot apical
meristem specification" evidence=RCA] [GO:0010162 "seed dormancy
process" evidence=RCA] [GO:0010431 "seed maturation" evidence=RCA]
[GO:0010564 "regulation of cell cycle process" evidence=RCA]
[GO:0043090 "amino acid import" evidence=RCA] [GO:0045595
"regulation of cell differentiation" evidence=RCA] [GO:0048316
"seed development" evidence=RCA] [GO:0048366 "leaf development"
evidence=IMP;RCA] [GO:0048825 "cotyledon development" evidence=RCA]
[GO:0051301 "cell division" evidence=RCA] [GO:0010087 "phloem or
xylem histogenesis" evidence=IMP] InterPro:IPR001373
InterPro:IPR016157 InterPro:IPR016158 InterPro:IPR019559
Pfam:PF00888 Pfam:PF10557 PROSITE:PS01256 PROSITE:PS50069
SMART:SM00182 SMART:SM00884 UniPathway:UPA00143 GO:GO:0005829
EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0009733 GO:GO:0009734
GO:GO:0009873 GO:GO:0005819 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0042752 GO:GO:0009793 GO:GO:0016567 GO:GO:0007049
GO:GO:0000794 GO:GO:0006511 eggNOG:COG5647 SUPFAM:SSF75632
GO:GO:0031461 GO:GO:0000151 GO:GO:0009524 GO:GO:0009867
InterPro:IPR016159 SUPFAM:SSF74788 EMBL:AC002330 EMBL:AL161494
KO:K03347 HOGENOM:HOG000176712 EMBL:AJ318017 EMBL:AY046030
EMBL:AY133878 EMBL:AK222216 IPI:IPI00524614 PIR:T01092
RefSeq:NP_001031575.1 RefSeq:NP_001031576.1 RefSeq:NP_001190661.1
RefSeq:NP_567243.1 UniGene:At.24877 UniGene:At.67849
ProteinModelPortal:Q94AH6 SMR:Q94AH6 IntAct:Q94AH6 STRING:Q94AH6
PaxDb:Q94AH6 PRIDE:Q94AH6 EnsemblPlants:AT4G02570.1
EnsemblPlants:AT4G02570.2 EnsemblPlants:AT4G02570.3
EnsemblPlants:AT4G02570.4 GeneID:825648 KEGG:ath:AT4G02570
TAIR:At4g02570 InParanoid:Q94AH6 OMA:LDEGHEN PhylomeDB:Q94AH6
ProtClustDB:CLSN2689296 Genevestigator:Q94AH6 GermOnline:AT4G02570
GO:GO:0010265 Uniprot:Q94AH6
Length = 738
Score = 2568 (909.0 bits), Expect = 5.5e-267, P = 5.5e-267
Identities = 487/557 (87%), Positives = 529/557 (94%)
Query: 1 MGQMDSYEKDFEEHMLQDTGAYYSRKASNWILEDSCPEYMIKAEECLKKERDRVSHYLHS 60
MGQM+ YE+DFE MLQDT +YYSRKAS+WI EDSCP+YM+K+EECLKKER+RV+HYLHS
Sbjct: 182 MGQMERYEEDFESFMLQDTSSYYSRKASSWIQEDSCPDYMLKSEECLKKERERVAHYLHS 241
Query: 61 SSEPKLVEKVQHELLVVYATELLEKEQSGCRALLREDKVEDLSRMYRLYHKIPKGLEPVA 120
SSEPKLVEKVQHELLVV+A++LLEKE SGCRALLR+DKV+DLSRMYRLYHKI +GLEPVA
Sbjct: 242 SSEPKLVEKVQHELLVVFASQLLEKEHSGCRALLRDDKVDDLSRMYRLYHKILRGLEPVA 301
Query: 121 NVFKQHITAEGTVLVQQAEDAATNQGGSSGAVQEQVLIRKIIELHDKYMEYVTNCFINHT 180
N+FKQH+TAEG LVQQAED ATNQ ++ +VQEQVLIRK+IELHDKYM YVT CF NHT
Sbjct: 302 NIFKQHVTAEGNALVQQAEDTATNQVANTASVQEQVLIRKVIELHDKYMVYVTECFQNHT 361
Query: 181 LFHKALKEAFEIFCNKAVGGSSSSELLATFCDNILKKGGNEKLSDEAIEETLEKVVKLLA 240
LFHKALKEAFEIFCNK V GSSS+ELLATFCDNILKKGG+EKLSDEAIE+TLEKVVKLLA
Sbjct: 362 LFHKALKEAFEIFCNKTVAGSSSAELLATFCDNILKKGGSEKLSDEAIEDTLEKVVKLLA 421
Query: 241 YISDKDLFAEFYRKKLARRLLFDRSANDDHERSILTKLKQQCGGQFTSKMEGMVTDLTLA 300
YISDKDLFAEFYRKKLARRLLFDRSANDDHERSILTKLKQQCGGQFTSKMEGMVTDLTLA
Sbjct: 422 YISDKDLFAEFYRKKLARRLLFDRSANDDHERSILTKLKQQCGGQFTSKMEGMVTDLTLA 481
Query: 301 RENQTSFEEYLSNNQNAHPGIDLSVTVLTTGFWPSYKSSDLNLPSEMVKCVEVFKGFYET 360
RENQ SFE+YL +N A+PGIDL+VTVLTTGFWPSYKS D+NLPSEM+KCVEVFKGFYET
Sbjct: 482 RENQNSFEDYLGSNPAANPGIDLTVTVLTTGFWPSYKSFDINLPSEMIKCVEVFKGFYET 541
Query: 361 KTKHRKLTWIYSLGQCNINGKFEQKNIELIVSTYQAATLLLFNTSDRLSYSEIMTQLNLT 420
KTKHRKLTWIYSLG C+INGKF+QK IELIVSTYQAA LLLFNT+D+LSY+EI+ QLNL+
Sbjct: 542 KTKHRKLTWIYSLGTCHINGKFDQKAIELIVSTYQAAVLLLFNTTDKLSYTEILAQLNLS 601
Query: 421 HDDLVRLLHSLSCAKYKILLKEPNTKTISQSDHFEFNSKFTDRMRRIKIPLPPVDERKKI 480
H+DLVRLLHSLSCAKYKILLKEPNTKT+SQ+D FEFNSKFTDRMRRIKIPLPPVDERKK+
Sbjct: 602 HEDLVRLLHSLSCAKYKILLKEPNTKTVSQNDAFEFNSKFTDRMRRIKIPLPPVDERKKV 661
Query: 481 VEDVDKDRRYAIDAALVRIMKSRKVLGHQQLVSECVEQLSRMFKPDIKAIKKRMEDLITR 540
VEDVDKDRRYAIDAA+VRIMKSRKVLGHQQLVSECVEQLSRMFKPDIKAIKKRMEDLITR
Sbjct: 662 VEDVDKDRRYAIDAAIVRIMKSRKVLGHQQLVSECVEQLSRMFKPDIKAIKKRMEDLITR 721
Query: 541 DYLERDKENPNMFRYLA 557
DYLERDKENPNMFRYLA
Sbjct: 722 DYLERDKENPNMFRYLA 738
>TAIR|locus:2024755 [details] [associations]
symbol:CUL2 "cullin 2" species:3702 "Arabidopsis
thaliana" [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0031461 "cullin-RING ubiquitin ligase
complex" evidence=IEA] [GO:0031625 "ubiquitin protein ligase
binding" evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=ISS]
[GO:0009941 "chloroplast envelope" evidence=IDA] InterPro:IPR001373
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0009941
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006511 GO:GO:0019005
eggNOG:COG5647 SUPFAM:SSF75632 EMBL:AC009525 InterPro:IPR016159
SUPFAM:SSF74788 KO:K03347 HOGENOM:HOG000176712
ProtClustDB:CLSN2689296 EMBL:AK117909 EMBL:BT006231 IPI:IPI00541917
PIR:D86160 RefSeq:NP_171797.2 UniGene:At.42569 HSSP:Q9JLV5
ProteinModelPortal:Q9SRZ0 SMR:Q9SRZ0 STRING:Q9SRZ0 PaxDb:Q9SRZ0
PRIDE:Q9SRZ0 EnsemblPlants:AT1G02980.1 GeneID:839415
KEGG:ath:AT1G02980 TAIR:At1g02980 InParanoid:Q9SRZ0 OMA:NDYHERS
PhylomeDB:Q9SRZ0 Genevestigator:Q9SRZ0 Uniprot:Q9SRZ0
Length = 742
Score = 2092 (741.5 bits), Expect = 1.5e-216, P = 1.5e-216
Identities = 394/560 (70%), Positives = 481/560 (85%)
Query: 1 MGQMDSYEKDFEEHMLQDTGAYYSRKASNWILEDSCPEYMIKAEECLKKERDRVSHYLHS 60
MG++ YE+DFE +L+D+ +YYSR AS W E+SCP+YMIKAEE L+ E++RV++YLHS
Sbjct: 183 MGELVKYEEDFESFLLEDSASYYSRNASRWNQENSCPDYMIKAEESLRLEKERVTNYLHS 242
Query: 61 SSEPKLVEKVQHELLVVYATELLEKEQSGCRALLREDKVEDLSRMYRLYHKIPKGLEPVA 120
++EPKLV KVQ+ELLVV A +L+E E SGCRALLR+DK++DL+RMYRLYH IP+GL+PVA
Sbjct: 243 TTEPKLVAKVQNELLVVVAKQLIENEHSGCRALLRDDKMDDLARMYRLYHPIPQGLDPVA 302
Query: 121 NVFKQHITAEGTVLVQQAEDAATNQGGS-SGA-VQEQVLIRKIIELHDKYMEYVTNCFIN 178
++FKQHIT EG+ L++QA +AAT++ S SG VQ+QVLIR++I+LHDK+M YV CF
Sbjct: 303 DLFKQHITVEGSALIKQATEAATDKAASTSGLKVQDQVLIRQLIDLHDKFMVYVDECFQK 362
Query: 179 HTLFHKALKEAFEIFCNKAVGGSSSSELLATFCDNILKKGGN-EKLSDEAIEETLEKVVK 237
H+LFHKALKEAFE+FCNK V G SS+E+LAT+CDNILK GG EKL +E +E TLEKVVK
Sbjct: 363 HSLFHKALKEAFEVFCNKTVAGVSSAEILATYCDNILKTGGGIEKLENEDLELTLEKVVK 422
Query: 238 LLAYISDKDLFAEFYRKKLARRLLFDRSANDDHERSILTKLKQQCGGQFTSKMEGMVTDL 297
LL YISDKDLFAEF+RKK ARRLLFDR+ ND HERS+LTK K+ G QFTSKMEGM+TD+
Sbjct: 423 LLVYISDKDLFAEFFRKKQARRLLFDRNGNDYHERSLLTKFKELLGAQFTSKMEGMLTDM 482
Query: 298 TLARENQTSFEEYLSNNQNAHPGIDLSVTVLTTGFWPSYKSSDLNLPSEMVKCVEVFKGF 357
TLA+E+QT+F E+LS N+ G+D +VTVLTTGFWPSYK++DLNLP EMV CVE FK +
Sbjct: 483 TLAKEHQTNFVEFLSVNKTKKLGMDFTVTVLTTGFWPSYKTTDLNLPIEMVNCVEAFKAY 542
Query: 358 YETKTKHRKLTWIYSLGQCNINGKFEQKNIELIVSTYQAATLLLFNTSDRLSYSEIMTQL 417
Y TKT R+L+WIYSLG C + GKF++K IE++V+TYQAA LLLFN ++RLSY+EI+ QL
Sbjct: 543 YGTKTNSRRLSWIYSLGTCQLAGKFDKKTIEIVVTTYQAAVLLLFNNTERLSYTEILEQL 602
Query: 418 NLTHDDLVRLLHSLSCAKYKILLKEPNTKTISQSDHFEFNSKFTDRMRRIKIPLPPVDER 477
NL H+DL RLLHSLSC KYKIL+KEP ++ IS +D FEFNSKFTD+MRRI++PLPP+DER
Sbjct: 603 NLGHEDLARLLHSLSCLKYKILIKEPMSRNISNTDTFEFNSKFTDKMRRIRVPLPPMDER 662
Query: 478 KKIVEDVDKDRRYAIDAALVRIMKSRKVLGHQQLVSECVEQLSRMFKPDIKAIKKRMEDL 537
KKIVEDVDKDRRYAIDAALVRIMKSRKVLGHQQLVSECVE LS+MFKPDIK IKKR+EDL
Sbjct: 663 KKIVEDVDKDRRYAIDAALVRIMKSRKVLGHQQLVSECVEHLSKMFKPDIKMIKKRIEDL 722
Query: 538 ITRDYLERDKENPNMFRYLA 557
I+RDYLERD +NPN F+YLA
Sbjct: 723 ISRDYLERDTDNPNTFKYLA 742
>TAIR|locus:2018645 [details] [associations]
symbol:AT1G43140 species:3702 "Arabidopsis thaliana"
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0031461 "cullin-RING ubiquitin ligase complex"
evidence=IEA] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] InterPro:IPR001373 InterPro:IPR016158
InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557 PROSITE:PS01256
PROSITE:PS50069 SMART:SM00182 SMART:SM00884 EMBL:CP002684
GenomeReviews:CT485782_GR Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0006511 SUPFAM:SSF75632 GO:GO:0031461 InterPro:IPR016159
SUPFAM:SSF74788 KO:K03347 EMBL:AC005687 IPI:IPI00938797
RefSeq:NP_175007.2 UniGene:At.74523 ProteinModelPortal:P0CH31
SMR:P0CH31 EnsemblPlants:AT1G43140.1 GeneID:3767291
KEGG:ath:AT1G43140 TAIR:At1g43140 HOGENOM:HOG000176712 OMA:RTISKTD
Uniprot:P0CH31
Length = 721
Score = 1052 (375.4 bits), Expect = 3.3e-208, Sum P(2) = 3.3e-208
Identities = 199/264 (75%), Positives = 232/264 (87%)
Query: 294 VTDLTLARENQTSFEEYLSNNQNAHPGIDLSVTVLTTGFWPSYKSSDLNLPSEMVKCVEV 353
VTD+TLARE QT+F +YLS N GID +VTVLTTGFWPSYK++DLNLP+EMV CVE
Sbjct: 458 VTDITLARELQTNFVDYLSANMTTKLGIDFTVTVLTTGFWPSYKTTDLNLPTEMVNCVEA 517
Query: 354 FKGFYETKTKHRKLTWIYSLGQCNINGKFEQKNIELIVSTYQAATLLLFNTSDRLSYSEI 413
FK FY TKT R+L+WIYSLG C+I GKFE+K +EL+VSTYQAA LLLFN ++RLSY+EI
Sbjct: 518 FKVFYGTKTNSRRLSWIYSLGTCHILGKFEKKTMELVVSTYQAAVLLLFNNAERLSYTEI 577
Query: 414 MTQLNLTHDDLVRLLHSLSCAKYKILLKEPNTKTISQSDHFEFNSKFTDRMRRIKIPLPP 473
QLNL+H+DLVRLLHSLSC KYKIL+KEP ++TIS++D FEFNSKFTD+MR+I++PLPP
Sbjct: 578 SEQLNLSHEDLVRLLHSLSCLKYKILIKEPMSRTISKTDTFEFNSKFTDKMRKIRVPLPP 637
Query: 474 VDERKKIVEDVDKDRRYAIDAALVRIMKSRKVLGHQQLVSECVEQLSRMFKPDIKAIKKR 533
+DERKK+VEDVDKDRRYAIDAALVRIMKSRKVL HQQLVSECVE LS+MFKPDIK IKKR
Sbjct: 638 MDERKKVVEDVDKDRRYAIDAALVRIMKSRKVLAHQQLVSECVEHLSKMFKPDIKMIKKR 697
Query: 534 MEDLITRDYLERDKENPNMFRYLA 557
+EDLI RDYLERD EN N F+Y+A
Sbjct: 698 IEDLINRDYLERDTENANTFKYVA 721
Score = 984 (351.4 bits), Expect = 3.3e-208, Sum P(2) = 3.3e-208
Identities = 190/266 (71%), Positives = 224/266 (84%)
Query: 1 MGQMDSYEKDFEEHMLQDTGAYYSRKASNWILEDSCPEYMIKAEECLKKERDRVSHYLHS 60
+GQM YE+DFE +LQDT +YYSRKAS W EDSCP+YM+KAEECLK E++RV++YLHS
Sbjct: 191 VGQMVIYEEDFESFLLQDTASYYSRKASRWSQEDSCPDYMLKAEECLKLEKERVTNYLHS 250
Query: 61 SSEPKLVEKVQHELLVVYATELLEKEQSGCRALLREDKVEDLSRMYRLYHKIPKGLEPVA 120
++EPKLVEKVQ+ELLVV A +L+E E SGC ALLR+DK+ DLSRMYRLY IP+GLEP+A
Sbjct: 251 TTEPKLVEKVQNELLVVVAKQLIENEHSGCLALLRDDKMGDLSRMYRLYRLIPQGLEPIA 310
Query: 121 NVFKQHITAEGTVLVQQAEDAATNQGGSSGAVQEQVLIRKIIELHDKYMEYVTNCFINHT 180
++FKQH+TAEG L++QA DAATNQ S+ QVL+RK IELHDKYM YV CF H+
Sbjct: 311 DLFKQHVTAEGNALIKQAADAATNQDASAS----QVLVRKEIELHDKYMVYVDECFQKHS 366
Query: 181 LFHKALKEAFEIFCNKAVGGSSSSELLATFCDNILK-KGGNEKLSDEAIEETLEKVVKLL 239
LFHK LKEAFE+FCNK V G+SS+E+LAT+CDNILK +GG+EKLSDEA E TLEKVV LL
Sbjct: 367 LFHKLLKEAFEVFCNKTVAGASSAEILATYCDNILKTRGGSEKLSDEATEITLEKVVNLL 426
Query: 240 AYISDKDLFAEFYRKKLARRLLFDRS 265
YISDKDLFAEFYRKK ARRLLFDRS
Sbjct: 427 VYISDKDLFAEFYRKKQARRLLFDRS 452
>DICTYBASE|DDB_G0284903 [details] [associations]
symbol:culC "cullin C" species:44689 "Dictyostelium
discoideum" [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0031461 "cullin-RING ubiquitin ligase complex"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA]
InterPro:IPR001373 InterPro:IPR016157 InterPro:IPR016158
InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557 PROSITE:PS01256
PROSITE:PS50069 SMART:SM00182 SMART:SM00884 UniPathway:UPA00143
dictyBase:DDB_G0284903 GO:GO:0005634 GenomeReviews:CM000153_GR
EMBL:AAFI02000073 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0016567 GO:GO:0006511 eggNOG:COG5647 SUPFAM:SSF75632
GO:GO:0031461 InterPro:IPR016159 SUPFAM:SSF74788 HSSP:Q9JLV5
KO:K03869 RefSeq:XP_639922.1 ProteinModelPortal:Q54NZ5 SMR:Q54NZ5
STRING:Q54NZ5 EnsemblProtists:DDB0266742 GeneID:8624834
KEGG:ddi:DDB_G0284903 OMA:YRTESEN Uniprot:Q54NZ5
Length = 769
Score = 799 (286.3 bits), Expect = 3.2e-104, Sum P(2) = 3.2e-104
Identities = 173/440 (39%), Positives = 265/440 (60%)
Query: 7 YEKDFEEHMLQDTGAYYSRKASNWILEDSCPEYMIKAEECLKKERDRVSHYLHSSSEPKL 66
Y +DFE+ +L T ++Y ++ I SCP+YM K E CLK+E +RVSHYL SSSEPKL
Sbjct: 196 YIEDFEKPLLLKTSSHYQAQSQTLIQTCSCPDYMKKVEICLKEELERVSHYLDSSSEPKL 255
Query: 67 VEKVQHELLVVYATELLEKEQSGCRALLREDKVEDLSRMYRLYHKIPKGLEPVANVFKQH 126
E + +L+ + L++ E SG ++L++DK+EDL RMY L+ ++ GL + +V +
Sbjct: 256 KEVCEKQLISNHMRTLIDMENSGLISMLKDDKIEDLKRMYNLFSRVSDGLNLMKDVISSY 315
Query: 127 ITAEGTVLVQQAEDAATNQGGSSGAVQEQVLIRKIIELHDKYMEYVTNCFINHTLFHKAL 186
+ G +V E T + G+ + +++L DKY + N N F ++
Sbjct: 316 VKEIGRGIVMDEEK--TKESGT--------YFQSLLDLKDKYDNLLQNALYNDKQFIHSI 365
Query: 187 KEAFEIFCNKAVGGSSSSELLATFCDNILKKGGNEKLSDEAIEETLEKVVKLLAYISDKD 246
++AFE F N S E ++ F D LKKG + +S+E ++ L+K++ L I +KD
Sbjct: 366 QQAFEYFINL---NPKSPEYISLFIDEKLKKG-LKGVSEEEVDIILDKILMLFRLIQEKD 421
Query: 247 LFAEFYRKKLARRLLFDRSANDDHERSILTKLKQQCGGQFTSKMEGMVTDLTLARENQTS 306
+F ++Y++ LA+RLL RS +DD ER+++ KLK +CG QFTSK+EGM TD+ L+++ +
Sbjct: 422 VFEKYYKQHLAKRLLLGRSISDDAERNMIAKLKTECGYQFTSKLEGMFTDMRLSQDTMSG 481
Query: 307 FEEYLSNNQNAHPGIDLSVTVLTTGFWPSYKSSDLNLPSEMVKCVEVFKGFYETKTKHRK 366
F+ Y+ N + A P IDL+V VLTTGFWP+ +++ NLP E++ C E FK +Y + R
Sbjct: 482 FKTYIQNLKKALP-IDLNVHVLTTGFWPTQNTANCNLPREILLCCEAFKSYYLSNHNGRL 540
Query: 367 LTWIYSLGQCNINGKFEQKNIELIVSTYQAATLLLFNTSDRLSYSEIMTQLNLTHDDLVR 426
L W ++G I F K+ EL VS+YQ LLLFN +L++ EI Q + DL R
Sbjct: 541 LLWQTNMGTAEIKANFPSKSHELQVSSYQMVILLLFNDQSKLTFKEIADQTGIPTIDLKR 600
Query: 427 LLHSLSCAKYKILLKE-PNT 445
L +L+ K KIL +E P+T
Sbjct: 601 NLLALTNPKNKILDRELPST 620
Score = 253 (94.1 bits), Expect = 3.2e-104, Sum P(2) = 3.2e-104
Identities = 52/118 (44%), Positives = 81/118 (68%)
Query: 445 TKTISQSDHFEFNSKFTDRMRRIKIPL-----PPVDERKKIVEDVDKDRRYAIDAALVRI 499
+K+I +SD F FN+KF ++ R+K+ PV+E K+ + VD+DR++ I+A++VRI
Sbjct: 653 SKSIDESDVFAFNTKFKSKLFRVKVMAVVQKETPVEE-KETRDKVDEDRKHQIEASIVRI 711
Query: 500 MKSRKVLGHQQLVSECVEQLSRMFKPDIKAIKKRMEDLITRDYLERDKENPNMFRYLA 557
MK+RK L H LVSE ++QL F P+ +KKR+E LI R+YLER K++ ++ Y+A
Sbjct: 712 MKARKTLEHSNLVSEVIKQLQSRFVPNPVIVKKRIESLIEREYLERSKQDRKIYNYMA 769
>TAIR|locus:2200670 [details] [associations]
symbol:CUL3 "AT1G26830" species:3702 "Arabidopsis
thaliana" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA;TAS]
[GO:0031461 "cullin-RING ubiquitin ligase complex" evidence=IEA]
[GO:0031625 "ubiquitin protein ligase binding" evidence=IEA]
[GO:0000151 "ubiquitin ligase complex" evidence=TAS] [GO:0005515
"protein binding" evidence=IPI] [GO:0009639 "response to red or far
red light" evidence=RCA;IMP] [GO:0009911 "positive regulation of
flower development" evidence=IMP] [GO:0019005 "SCF ubiquitin ligase
complex" evidence=IPI] [GO:0009793 "embryo development ending in
seed dormancy" evidence=IGI] [GO:0009960 "endosperm development"
evidence=IGI] [GO:0005829 "cytosol" evidence=IDA] [GO:0008284
"positive regulation of cell proliferation" evidence=RCA]
[GO:0009630 "gravitropism" evidence=RCA] InterPro:IPR001373
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005829
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0009793 GO:GO:0009639
GO:GO:0009911 GO:GO:0006511 GO:GO:0009960 eggNOG:COG5647
SUPFAM:SSF75632 GO:GO:0031461 EMBL:AC005508 EMBL:AC006535
InterPro:IPR016159 SUPFAM:SSF74788 HOGENOM:HOG000176712 HSSP:Q9JLV5
EMBL:AJ319540 EMBL:AJ344252 EMBL:AK230392 IPI:IPI00528089
PIR:A86395 RefSeq:NP_174005.1 UniGene:At.27879
ProteinModelPortal:Q9ZVH4 SMR:Q9ZVH4 DIP:DIP-33568N IntAct:Q9ZVH4
STRING:Q9ZVH4 PaxDb:Q9ZVH4 PRIDE:Q9ZVH4 EnsemblPlants:AT1G26830.1
GeneID:839226 KEGG:ath:AT1G26830 TAIR:At1g26830 InParanoid:Q9ZVH4
KO:K03869 OMA:ATFYGPI PhylomeDB:Q9ZVH4 ProtClustDB:CLSN2912776
Genevestigator:Q9ZVH4 Uniprot:Q9ZVH4
Length = 732
Score = 914 (326.8 bits), Expect = 1.0e-91, P = 1.0e-91
Identities = 209/559 (37%), Positives = 322/559 (57%)
Query: 7 YEKDFEEHMLQDTGAYYSRKASNWILEDSCPEYMIKAEECLKKERDRVSHYLHSSSEPKL 66
Y++DFE+ L + +Y ++ +I C +Y+ K+E+ L +E +RV+HYL + SE K+
Sbjct: 192 YQEDFEKPFLDASSEFYKVESQEFIESCDCGDYLKKSEKRLTEEIERVAHYLDAKSEEKI 251
Query: 67 VEKVQHELLVVYATELLEKEQSGCRALLREDKVEDLSRMYRLYHKIPKGLEPVANVFKQH 126
V+ E++ + L+ E SG +L DK EDL RMY L+ ++ GL V +V H
Sbjct: 252 TSVVEKEMIANHMQRLVHMENSGLVNMLLNDKYEDLGRMYNLFRRVTNGLVTVRDVMTSH 311
Query: 127 ITAEGTVLVQQAEDAATNQGGSSGAVQEQVLIRKIIELHDKYMEYVTNCFINHTLFHKAL 186
+ G LV E S V+ ++++++ DKY + + F N F AL
Sbjct: 312 LREMGKQLVTDPEK-------SKDPVE---FVQRLLDERDKYDKIINTAFGNDKTFQNAL 361
Query: 187 KEAFEIFCNKAVGGSSSSELLATFCDNILKKGGNEKLSDEAIEETLEKVVKLLAYISDKD 246
+FE F N + S E ++ F D+ L+KG + ++D +E L+KV+ L Y+ +KD
Sbjct: 362 NSSFEYFINL---NARSPEFISLFVDDKLRKG-LKGITDVDVEVILDKVMMLFRYLQEKD 417
Query: 247 LFAEFYRKKLARRLLFDRSANDDHERSILTKLKQQCGGQFTSKMEGMVTDLTLARENQTS 306
+F ++Y++ LA+RLL ++ +DD ERS++ KLK +CG QFTSK+EGM TD+ + +
Sbjct: 418 VFEKYYKQHLAKRLLSGKTVSDDAERSLIVKLKTECGYQFTSKLEGMFTDMKTSEDTMRG 477
Query: 307 FEEYLSNNQNAHPGIDLSVTVLTTGFWPSYKSSDLNLPSEMVKCVEVFKGFYETKTKHRK 366
F Y S+ + + G L V VLTTG WP+ + NLP+E+ E F+ +Y R+
Sbjct: 478 F--YGSHPELSE-GPTLIVQVLTTGSWPTQPAVPCNLPAEVSVLCEKFRSYYLGTHTGRR 534
Query: 367 LTWIYSLGQCNINGKFE--QKNIELIVSTYQAATLLLFNTSDRLSYSEIMTQLNLTHDDL 424
L+W ++G +I F QK+ EL VST+Q L+LFN SDRLSY EI + DL
Sbjct: 535 LSWQTNMGTADIKAIFGKGQKH-ELNVSTFQMCVLMLFNNSDRLSYKEIEQATEIPAADL 593
Query: 425 VRLLHSLSCAKYK-ILLKEPNTKTISQSDHFEFNSKFTDRMRRIKIPLPPVD-----ERK 478
R L SL+C K K ++ KEP +K I + D F N KFT + ++KI E++
Sbjct: 594 KRCLQSLACVKGKNVIKKEPMSKDIGEEDLFVVNDKFTSKFYKVKIGTVVAQKETEPEKQ 653
Query: 479 KIVEDVDKDRRYAIDAALVRIMKSRKVLGHQQLVSECVEQLSRMFKPDIKAIKKRMEDLI 538
+ + V++DR+ I+AA+VRIMKSRK+L H +++E +QL F + IKKR+E LI
Sbjct: 654 ETRQRVEEDRKPQIEAAIVRIMKSRKILDHNNIIAEVTKQLQPRFLANPTEIKKRIESLI 713
Query: 539 TRDYLERDKENPNMFRYLA 557
RD+LERD + ++RYLA
Sbjct: 714 ERDFLERDSTDRKLYRYLA 732
>UNIPROTKB|Q6DE95 [details] [associations]
symbol:cul3a "Cullin-3-A" species:8355 "Xenopus laevis"
[GO:0000090 "mitotic anaphase" evidence=ISS] [GO:0000910
"cytokinesis" evidence=ISS] [GO:0005827 "polar microtubule"
evidence=ISS] [GO:0006513 "protein monoubiquitination"
evidence=ISS] [GO:0006888 "ER to Golgi vesicle-mediated transport"
evidence=ISS] [GO:0007229 "integrin-mediated signaling pathway"
evidence=ISS] [GO:0016477 "cell migration" evidence=ISS]
[GO:0016567 "protein ubiquitination" evidence=ISS] [GO:0017145
"stem cell division" evidence=ISS] [GO:0031463 "Cul3-RING ubiquitin
ligase complex" evidence=ISS] [GO:0035024 "negative regulation of
Rho protein signal transduction" evidence=ISS] [GO:0040016
"embryonic cleavage" evidence=ISS] [GO:0043149 "stress fiber
assembly" evidence=ISS] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0048208 "COPII vesicle coating" evidence=ISS] [GO:0051322
"anaphase" evidence=ISS] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=ISS] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
UniPathway:UPA00143 GO:GO:0005634 GO:GO:0043161 GO:GO:0016477
GO:GO:0000090 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0040016
GO:GO:0000910 GO:GO:0007229 GO:GO:0035024 SUPFAM:SSF75632
GO:GO:0043149 GO:GO:0031463 GO:GO:0006513 InterPro:IPR016159
SUPFAM:SSF74788 GO:GO:0005827 HSSP:Q9JLV5 KO:K03869 EMBL:BC077239
RefSeq:NP_001086652.1 UniGene:Xl.48191 ProteinModelPortal:Q6DE95
SMR:Q6DE95 PRIDE:Q6DE95 GeneID:446487 KEGG:xla:446487 CTD:446487
Xenbase:XB-GENE-974989 GO:GO:0048208 GO:GO:0017145 Uniprot:Q6DE95
Length = 768
Score = 571 (206.1 bits), Expect = 1.5e-89, Sum P(2) = 1.5e-89
Identities = 121/377 (32%), Positives = 214/377 (56%)
Query: 7 YEKDFEEHMLQDTGAYYSRKASNWILEDSCPEYMIKAEECLKKERDRVSHYLHSSSEPKL 66
YE+DFE L+ + ++ ++ ++ E+S Y+ K E + +E +RV H L S+E +
Sbjct: 201 YEEDFEAPFLEMSAEFFQMESQKFLAENSASVYIKKVEARINEEIERVMHCLDKSTEEPI 260
Query: 67 VEKVQHELLVVYATELLEKEQSGCRALLREDKVEDLSRMYRLYHKIPKGLEPVANVFKQH 126
V+ V+ EL+ + ++E E SG +L+ K EDL+ MY+L+ ++P GL+ + +
Sbjct: 261 VKVVERELISKHMKTIVEMENSGLVHMLKNGKTEDLACMYKLFSRVPNGLKTMCECMSLY 320
Query: 127 ITAEGTVLVQQAEDAATNQGGSSGAVQEQVLIRKIIELHDKYMEYVTNCFINHTLFHKAL 186
+ +G LV + +G V I+ +++L ++ ++ F N LF + +
Sbjct: 321 LREQGKALVSE-------EGEGKNPVD---YIQGLLDLKSRFDRFLQESFSNDRLFKQTI 370
Query: 187 KEAFEIFCNKAVGGSSSSELLATFCDNILKKGGNEKLSDEAIEETLEKVVKLLAYISDKD 246
FE F N S S E L+ F D+ LKKG + L+++ +E L+K + L ++ +KD
Sbjct: 371 AGDFEYFLNL---NSRSPEYLSLFIDDKLKKGV-KGLTEQEVESILDKAMVLFRFMQEKD 426
Query: 247 LFAEFYRKKLARRLLFDRSANDDHERSILTKLKQQCGGQFTSKMEGMVTDLTLARENQTS 306
+F +Y++ LARRLL ++S +DD E+++++KLK +CG QFTSK+EGM D++++
Sbjct: 427 VFERYYKQHLARRLLTNKSVSDDSEKNMISKLKTECGCQFTSKLEGMFRDMSISNTTMDE 486
Query: 307 FEEYLSNNQNAHPGIDLSVTVLTTGFWPSYKSSD-LNLPSEMVKCVEVFKGFYETKTKHR 365
F ++L + G+DL+V VLTTG+WP+ ++ N+P E+F+ FY K R
Sbjct: 487 FRQHLQTTGVSLGGVDLTVRVLTTGYWPTQSATPKCNIPPAPRHAFEIFRRFYLAKHSGR 546
Query: 366 KLTWIYSLGQCNINGKF 382
+LT + +G ++N F
Sbjct: 547 QLTLQHHMGSADLNATF 563
Score = 342 (125.4 bits), Expect = 1.5e-89, Sum P(2) = 1.5e-89
Identities = 77/193 (39%), Positives = 113/193 (58%)
Query: 373 LGQCNINGKFEQKNIELIVSTYQAATLLLFNTSDRLSYSEIMTQLNLTHDDLVRLLHSLS 432
+G + G +K+I L VST+Q L+LFN D+ ++ EI + ++ +LVR L SL+
Sbjct: 577 VGGAQVTGSNTRKHI-LQVSTFQMTILMLFNNRDKYTFEEIQQETDIPERELVRALQSLA 635
Query: 433 CAK--YKILLKEPNTKTISQSDHFEFNSKFTDRMRRIKIPLPPVD------ERKKIVEDV 484
C K ++L KEP +K I F N +FT ++ R+KI ERK+ + V
Sbjct: 636 CGKPTQRVLTKEPKSKEIESGHMFTVNDQFTSKLHRVKIQTVAAKQGESDPERKETRQKV 695
Query: 485 DKDRRYAIDAALVRIMKSRKVLGHQQLVSECVEQLSRMFKPDIKAIKKRMEDLITRDYLE 544
D DR++ I+AA+VRIMKSRK + H LV+E +QL F P IKKR+E LI R+YL
Sbjct: 696 DDDRKHEIEAAIVRIMKSRKKMQHNVLVAEVTQQLKARFLPSPVVIKKRIEGLIEREYLA 755
Query: 545 RDKENPNMFRYLA 557
R E+ ++ Y+A
Sbjct: 756 RTPEDRKVYTYVA 768
>UNIPROTKB|Q6GPF3 [details] [associations]
symbol:cul3b "Cullin-3-B" species:8355 "Xenopus laevis"
[GO:0000090 "mitotic anaphase" evidence=ISS] [GO:0000910
"cytokinesis" evidence=ISS] [GO:0005827 "polar microtubule"
evidence=ISS] [GO:0006513 "protein monoubiquitination"
evidence=ISS] [GO:0006888 "ER to Golgi vesicle-mediated transport"
evidence=ISS] [GO:0007229 "integrin-mediated signaling pathway"
evidence=ISS] [GO:0016477 "cell migration" evidence=ISS]
[GO:0016567 "protein ubiquitination" evidence=ISS] [GO:0017145
"stem cell division" evidence=ISS] [GO:0031463 "Cul3-RING ubiquitin
ligase complex" evidence=ISS] [GO:0035024 "negative regulation of
Rho protein signal transduction" evidence=ISS] [GO:0040016
"embryonic cleavage" evidence=ISS] [GO:0043149 "stress fiber
assembly" evidence=ISS] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0048208 "COPII vesicle coating" evidence=ISS] [GO:0051322
"anaphase" evidence=ISS] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=ISS] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
UniPathway:UPA00143 GO:GO:0005634 GO:GO:0043161 GO:GO:0016477
GO:GO:0000090 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0040016
GO:GO:0000910 GO:GO:0007229 GO:GO:0035024 SUPFAM:SSF75632
GO:GO:0043149 GO:GO:0031463 GO:GO:0006513 InterPro:IPR016159
SUPFAM:SSF74788 GO:GO:0005827 HSSP:Q9JLV5 KO:K03869 GO:GO:0048208
GO:GO:0017145 EMBL:BC073186 RefSeq:NP_001085677.1 UniGene:Xl.71281
ProteinModelPortal:Q6GPF3 SMR:Q6GPF3 PRIDE:Q6GPF3 GeneID:444103
KEGG:xla:444103 CTD:444103 Xenbase:XB-GENE-6256683 Uniprot:Q6GPF3
Length = 768
Score = 572 (206.4 bits), Expect = 3.0e-89, Sum P(2) = 3.0e-89
Identities = 121/377 (32%), Positives = 214/377 (56%)
Query: 7 YEKDFEEHMLQDTGAYYSRKASNWILEDSCPEYMIKAEECLKKERDRVSHYLHSSSEPKL 66
YE+DFE L+ + ++ ++ ++ E+S Y+ K E + +E +RV H L S+E +
Sbjct: 201 YEEDFEAPFLEMSAEFFQMESQKFLAENSASVYIKKVEARINEEIERVMHCLDKSTEEPI 260
Query: 67 VEKVQHELLVVYATELLEKEQSGCRALLREDKVEDLSRMYRLYHKIPKGLEPVANVFKQH 126
V+ V+ EL+ + ++E E SG +L+ K EDL+ MY+L+ ++P GL+ + +
Sbjct: 261 VKVVERELISKHMKTIVEMENSGLVHMLKNGKTEDLACMYKLFSRVPNGLKTMCECMSLY 320
Query: 127 ITAEGTVLVQQAEDAATNQGGSSGAVQEQVLIRKIIELHDKYMEYVTNCFINHTLFHKAL 186
+ +G LV + +G V I+ +++L ++ ++ F N LF + +
Sbjct: 321 LREQGKALVSE-------EGEGKNPVD---YIQGLLDLKSRFDRFLQESFSNDRLFKQTI 370
Query: 187 KEAFEIFCNKAVGGSSSSELLATFCDNILKKGGNEKLSDEAIEETLEKVVKLLAYISDKD 246
FE F N S S E L+ F D+ LKKG + L+++ +E L+K + L ++ +KD
Sbjct: 371 AGDFEYFLNL---NSRSPEYLSLFIDDKLKKGV-KGLTEQEVESILDKAMVLFRFMQEKD 426
Query: 247 LFAEFYRKKLARRLLFDRSANDDHERSILTKLKQQCGGQFTSKMEGMVTDLTLARENQTS 306
+F +Y++ LARRLL ++S +DD E+++++KLK +CG QFTSK+EGM D++++
Sbjct: 427 VFERYYKQHLARRLLTNKSVSDDSEKNMISKLKTECGCQFTSKLEGMFRDMSISNTTMDE 486
Query: 307 FEEYLSNNQNAHPGIDLSVTVLTTGFWPSYKSSD-LNLPSEMVKCVEVFKGFYETKTKHR 365
F ++L + G+DL+V VLTTG+WP+ ++ N+P E+F+ FY K R
Sbjct: 487 FRQHLQTTGVSLGGVDLTVRVLTTGYWPTQSATPKCNIPPSPRHAFEIFRRFYLAKHSGR 546
Query: 366 KLTWIYSLGQCNINGKF 382
+LT + +G ++N F
Sbjct: 547 QLTLQHHMGSADLNATF 563
Score = 338 (124.0 bits), Expect = 3.0e-89, Sum P(2) = 3.0e-89
Identities = 76/193 (39%), Positives = 113/193 (58%)
Query: 373 LGQCNINGKFEQKNIELIVSTYQAATLLLFNTSDRLSYSEIMTQLNLTHDDLVRLLHSLS 432
+G + G +K+I L VST+Q L+LFN ++ ++ EI + ++ +LVR L SL+
Sbjct: 577 VGGAQVTGSNTRKHI-LQVSTFQMTILMLFNNREKYTFEEIQQETDIPERELVRALQSLA 635
Query: 433 CAK--YKILLKEPNTKTISQSDHFEFNSKFTDRMRRIKIPLPPVD------ERKKIVEDV 484
C K ++L KEP +K I F N +FT ++ R+KI ERK+ + V
Sbjct: 636 CGKPTQRVLTKEPKSKEIESGHMFTVNDQFTSKLHRVKIQTVAAKQGESDPERKETRQKV 695
Query: 485 DKDRRYAIDAALVRIMKSRKVLGHQQLVSECVEQLSRMFKPDIKAIKKRMEDLITRDYLE 544
D DR++ I+AA+VRIMKSRK + H LV+E +QL F P IKKR+E LI R+YL
Sbjct: 696 DDDRKHEIEAAIVRIMKSRKKMQHNVLVAEVTQQLKARFLPSPVVIKKRIEGLIEREYLA 755
Query: 545 RDKENPNMFRYLA 557
R E+ ++ Y+A
Sbjct: 756 RTPEDRKVYTYVA 768
>ZFIN|ZDB-GENE-081007-1 [details] [associations]
symbol:cul3b "cullin 3b" species:7955 "Danio rerio"
[GO:0031461 "cullin-RING ubiquitin ligase complex" evidence=IEA]
[GO:0031625 "ubiquitin protein ligase binding" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
ZFIN:ZDB-GENE-081007-1 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0006511 eggNOG:COG5647 SUPFAM:SSF75632 GO:GO:0031461
InterPro:IPR016159 SUPFAM:SSF74788 HOGENOM:HOG000176712 KO:K03869
HOVERGEN:HBG003619 OrthoDB:EOG4JWVCW EMBL:BC163249 IPI:IPI00481059
RefSeq:NP_001177414.1 UniGene:Dr.150567 STRING:B3DIU1 GeneID:572370
KEGG:dre:572370 CTD:572370 NextBio:20890938 ArrayExpress:B3DIU1
Uniprot:B3DIU1
Length = 766
Score = 572 (206.4 bits), Expect = 3.0e-89, Sum P(2) = 3.0e-89
Identities = 122/377 (32%), Positives = 215/377 (57%)
Query: 7 YEKDFEEHMLQDTGAYYSRKASNWILEDSCPEYMIKAEECLKKERDRVSHYLHSSSEPKL 66
YE+DFE L+ + ++ ++ ++ E+S Y+ K E + +E +RV H L S+E +
Sbjct: 200 YEEDFEAPFLEMSAEFFQMESQKFLAENSASVYIKKVEARINEEIERVIHCLDKSTEEPI 259
Query: 67 VEKVQHELLVVYATELLEKEQSGCRALLREDKVEDLSRMYRLYHKIPKGLEPVANVFKQH 126
V+ V+ EL+ + ++E E SG +L+ K EDL+ MY+L+ ++P GL+ + +
Sbjct: 260 VKVVERELISKHMKTIVEMENSGLVHMLKNGKTEDLACMYKLFSRVPNGLKTMCECMSSY 319
Query: 127 ITAEGTVLVQQAEDAATNQGGSSGAVQEQVLIRKIIELHDKYMEYVTNCFINHTLFHKAL 186
+ +G LV + +G V I+ +++L ++ ++ F N LF + +
Sbjct: 320 LREQGKALVSE-------EGEGKNPVD---YIQGLLDLKSRFDRFLQESFNNDRLFKQTI 369
Query: 187 KEAFEIFCNKAVGGSSSSELLATFCDNILKKGGNEKLSDEAIEETLEKVVKLLAYISDKD 246
FE F N S S E L+ F D+ LKKG + L+++ +E L+K + L ++ +KD
Sbjct: 370 AGDFEYFLNL---NSRSPEYLSLFIDDKLKKGV-KGLTEQEVESILDKAMVLFRFMQEKD 425
Query: 247 LFAEFYRKKLARRLLFDRSANDDHERSILTKLKQQCGGQFTSKMEGMVTDLTLARENQTS 306
+F +Y++ LARRLL ++S +DD E+++++KLK +CG QFTSK+EGM D++++
Sbjct: 426 VFERYYKQHLARRLLTNKSVSDDSEKNMISKLKTECGCQFTSKLEGMFRDMSISNTTMDE 485
Query: 307 FEEYLSNNQNAHPGIDLSVTVLTTGFWPSYKSSD-LNLPSEMVKCVEVFKGFYETKTKHR 365
F ++L++ + G+DL V VLTTG+WP+ ++ N+P EVF+ FY K R
Sbjct: 486 FRQHLTSTGVSLGGVDLIVRVLTTGYWPTQSATPKCNIPPSPRHAFEVFRRFYLAKHSGR 545
Query: 366 KLTWIYSLGQCNINGKF 382
+LT + +G ++N F
Sbjct: 546 QLTLQHHMGSADLNATF 562
Score = 338 (124.0 bits), Expect = 3.0e-89, Sum P(2) = 3.0e-89
Identities = 77/193 (39%), Positives = 113/193 (58%)
Query: 373 LGQCNINGKFEQKNIELIVSTYQAATLLLFNTSDRLSYSEIMTQLNLTHDDLVRLLHSLS 432
+G + G +K+I L VST+Q L+LFN ++ ++ EI + ++ +LVR L SL+
Sbjct: 575 VGGAQVTGSNTRKHI-LQVSTFQMTILMLFNNREKSTFEEIQQETDIPERELVRALQSLA 633
Query: 433 CAK--YKILLKEPNTKTISQSDHFEFNSKFTDRMRRIKIPLPPVD------ERKKIVEDV 484
C K ++L KEP +K I F N +FT R+ R+KI ERK+ + V
Sbjct: 634 CGKPTQRVLTKEPKSKEIENGHVFTVNDQFTSRLHRVKIQTVAAKQGESDPERKETRQKV 693
Query: 485 DKDRRYAIDAALVRIMKSRKVLGHQQLVSECVEQLSRMFKPDIKAIKKRMEDLITRDYLE 544
D DR++ I+AA+VRIMKSRK + H LV+E +QL F P IKKR+E LI R+YL
Sbjct: 694 DDDRKHEIEAAIVRIMKSRKKMQHNVLVAEVTQQLRARFLPSPVVIKKRIEGLIEREYLA 753
Query: 545 RDKENPNMFRYLA 557
R E+ ++ Y+A
Sbjct: 754 RTPEDRKVYTYVA 766
>FB|FBgn0261268 [details] [associations]
symbol:Cul-3 "Cullin-3" species:7227 "Drosophila
melanogaster" [GO:0000152 "nuclear ubiquitin ligase complex"
evidence=ISS] [GO:0030162 "regulation of proteolysis" evidence=NAS]
[GO:0001745 "compound eye morphogenesis" evidence=NAS] [GO:0004842
"ubiquitin-protein ligase activity" evidence=NAS] [GO:0019005 "SCF
ubiquitin ligase complex" evidence=NAS] [GO:0031625 "ubiquitin
protein ligase binding" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0007476 "imaginal disc-derived wing morphogenesis"
evidence=IMP] [GO:0007423 "sensory organ development" evidence=IMP]
[GO:0048813 "dendrite morphogenesis" evidence=IMP] [GO:0007409
"axonogenesis" evidence=IMP] [GO:0031463 "Cul3-RING ubiquitin
ligase complex" evidence=IPI] [GO:0007291 "sperm individualization"
evidence=IMP] [GO:0016567 "protein ubiquitination" evidence=IMP]
[GO:0006919 "activation of cysteine-type endopeptidase activity
involved in apoptotic process" evidence=IMP] [GO:0030431 "sleep"
evidence=IMP] [GO:0045475 "locomotor rhythm" evidence=IMP]
[GO:0045187 "regulation of circadian sleep/wake cycle, sleep"
evidence=IMP] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
EMBL:AE014134 GO:GO:0030431 GO:GO:0030162 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0048813 GO:GO:0006919 GO:GO:0007291
GO:GO:0007409 GO:GO:0045475 GO:GO:0006511 GO:GO:0019005
GO:GO:0004842 GO:GO:0007476 eggNOG:COG5647 SUPFAM:SSF75632
GO:GO:0031463 InterPro:IPR016159 SUPFAM:SSF74788
GeneTree:ENSGT00550000074299 GO:GO:0001745 KO:K03869 CTD:34896
OMA:YRTESEN EMBL:BT133182 RefSeq:NP_723909.2 UniGene:Dm.18043
SMR:Q8IP45 IntAct:Q8IP45 EnsemblMetazoa:FBtr0302159 GeneID:34896
KEGG:dme:Dmel_CG42616 UCSC:CG31829-RA FlyBase:FBgn0261268
OrthoDB:EOG43R22K ChiTaRS:Cul-3 GenomeRNAi:34896 NextBio:790768
Uniprot:Q8IP45
Length = 934
Score = 602 (217.0 bits), Expect = 3.3e-89, Sum P(2) = 3.3e-89
Identities = 123/385 (31%), Positives = 229/385 (59%)
Query: 7 YEKDFEEHMLQDTGAYYSRKASNWILEDSCPEYMIKAEECLKKERDRVSHYLHSSSEPKL 66
YE+DFE+ L + A+Y ++ N++ E++ Y+ K E + +E R + YL +EP++
Sbjct: 360 YEEDFEKPFLAQSAAFYKFESQNFLAENNAGVYIKKVEARITEESSRAALYLDKDTEPRI 419
Query: 67 VEKVQHELLVVYATELLEKEQSGCRALLREDKVEDLSRMYRLYHKIPK-GLEPVANVFKQ 125
V V+ EL+ + ++E E SG +++ K EDL+ Y+L+ ++ + GL+ +A+
Sbjct: 420 VRVVEEELIKKHMRPIVEMENSGVVYMIKNSKTEDLACTYKLFSRLKEEGLKVIADTMSA 479
Query: 126 HITAEGTVLVQQAEDAATNQGGSSGAVQEQVLIRKIIELHDKYMEYVTNCFINHTLFHKA 185
++ +G +LV++ E+ TN ++ +++L D++ +++ + F N +F
Sbjct: 480 YLREQGRMLVKEEENGNTNP---------ITFVQNLLDLKDRFDQFLVHSFANDRIFKNV 530
Query: 186 LKEAFEIFCNKAVGGSSSSELLATFCDNILKKGGNEKLSDEAIEETLEKVVKLLAYISDK 245
+ FE F N + S E L+ F D+ LKKGG + +S++ IE L+K + L ++ +K
Sbjct: 531 ISSDFEHFLNL---NNKSPEYLSLFIDDKLKKGG-KGMSEQEIESILDKTMVLFRFLLEK 586
Query: 246 DLFAEFYRKKLARRLLFDRSANDDHERSILTKLKQQCGGQFTSKMEGMVTDLTLARENQT 305
D+F +Y+ LA+RLL ++S +DD E+++++KLK +CG QFTSK+EGM D++++
Sbjct: 587 DVFERYYKTHLAKRLLLNKSVSDDFEKNMISKLKTECGCQFTSKLEGMFKDMSVSNTIMD 646
Query: 306 SFEEYLSNNQNAHPGIDLSVTVLTTGFWPSYKSS-DLNLPSEMVKCVEVFKGFYETKTKH 364
F+ +++NN + G++L+V +LTTGFWP+ ++ + N+P+ + ++FK FY K
Sbjct: 647 EFKNFVNNNNLSLGGVELTVRILTTGFWPTQTATPNCNIPAAPREAFDIFKNFYLNKHSG 706
Query: 365 RKLTWIYSLGQCNINGKFE-QKNIE 388
R+LT +G IN F +K +E
Sbjct: 707 RQLTLQPQMGTAYINAVFYGRKAVE 731
Score = 318 (117.0 bits), Expect = 3.3e-89, Sum P(2) = 3.3e-89
Identities = 78/183 (42%), Positives = 107/183 (58%)
Query: 384 QKNIELIVSTYQAATLLLFNTSDRLSYSEIMTQLNLTHDDLVRLLHSLSCAK--YKILLK 441
+K+I L VSTYQ LLLFN D L+Y +I + ++ +LVR L SLS K ++L++
Sbjct: 753 RKHI-LQVSTYQMCVLLLFNNRDVLTYDDIHQETDIPERELVRALQSLSMGKPAQRLLVR 811
Query: 442 EPNTKT--ISQSDHFEFNSKFTDRMRRIKIPLPPVD-----ERKKIVEDVDKDRRYAIDA 494
TKT I +D F N F + R+KI ERK+ VD+DR++ I+A
Sbjct: 812 NSKTKTKDIEPTDEFYVNDAFNSKFHRVKIQTVAAKGESEPERKETRGKVDEDRKHEIEA 871
Query: 495 ALVRIMKSRKVLGHQQLVSECVEQLSRMFKPDIKAIKKRMEDLITRDYLERDKENPNMFR 554
A+VRIMK+RK L H LVS+ QL F P IKKR+E LI R+YL+R E+ ++
Sbjct: 872 AIVRIMKARKRLAHNLLVSDVTSQLKSRFLPSPVFIKKRIEGLIEREYLQRSPEDRKVYN 931
Query: 555 YLA 557
YLA
Sbjct: 932 YLA 934
Score = 53 (23.7 bits), Expect = 4.8e-26, Sum P(2) = 4.8e-26
Identities = 32/125 (25%), Positives = 49/125 (39%)
Query: 127 ITAEGTVLVQQAEDAATNQGGSSGA-VQEQVLIRKIIELHDKYM----EYVTNCFINHTL 181
+ A V + E +AT G S+ A + ++ E+ KY EY F N ++
Sbjct: 126 VPAPAAPAVVKTETSATTSGPSTSASASAESTEKRFKEIARKYPLWLPEYKRRAF-NASM 184
Query: 182 FHK-------ALKEAFEIFCNKAVGGSSSSELLATFCDNILKKGGNEKLSD--EAIEETL 232
K +LK A + K G S +L + +L K GN E + E L
Sbjct: 185 DEKYVETIWASLKNAIQEIQKKNNSGLSFEQLYRNAYNMVLHKHGNRLYYGLREVVSEHL 244
Query: 233 EKVVK 237
E V+
Sbjct: 245 EHKVR 249
Score = 40 (19.1 bits), Expect = 1.1e-24, Sum P(2) = 1.1e-24
Identities = 13/44 (29%), Positives = 21/44 (47%)
Query: 41 IKAEECLKKERDRVSHYLHSSSEPKLVEK-VQHELLVVYATELL 83
+ +E K R V LHS+ PKL + H+ +V ++L
Sbjct: 239 VVSEHLEHKVRADVLEALHSNFLPKLNQAWTDHQTSMVMIRDIL 282
>UNIPROTKB|E1BYQ3 [details] [associations]
symbol:CUL3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0000090 "mitotic anaphase" evidence=IEA]
[GO:0000910 "cytokinesis" evidence=IEA] [GO:0001831
"trophectodermal cellular morphogenesis" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005794 "Golgi apparatus" evidence=IEA]
[GO:0005827 "polar microtubule" evidence=IEA] [GO:0006513 "protein
monoubiquitination" evidence=IEA] [GO:0007229 "integrin-mediated
signaling pathway" evidence=IEA] [GO:0007369 "gastrulation"
evidence=IEA] [GO:0008054 "cyclin catabolic process" evidence=IEA]
[GO:0016055 "Wnt receptor signaling pathway" evidence=IEA]
[GO:0016477 "cell migration" evidence=IEA] [GO:0017145 "stem cell
division" evidence=IEA] [GO:0030332 "cyclin binding" evidence=IEA]
[GO:0031463 "Cul3-RING ubiquitin ligase complex" evidence=IEA]
[GO:0035024 "negative regulation of Rho protein signal
transduction" evidence=IEA] [GO:0040016 "embryonic cleavage"
evidence=IEA] [GO:0043149 "stress fiber assembly" evidence=IEA]
[GO:0048208 "COPII vesicle coating" evidence=IEA]
InterPro:IPR001373 InterPro:IPR016157 InterPro:IPR016158
InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557 PROSITE:PS01256
PROSITE:PS50069 SMART:SM00182 SMART:SM00884 GO:GO:0005634
GO:GO:0005794 GO:GO:0016477 GO:GO:0000090 GO:GO:0016055
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0000910 GO:GO:0007229
GO:GO:0035024 GO:GO:0004842 GO:GO:0008054 SUPFAM:SSF75632
GO:GO:0043149 GO:GO:0031463 GO:GO:0006513 InterPro:IPR016159
SUPFAM:SSF74788 GeneTree:ENSGT00550000074299 GO:GO:0005827
OMA:ATFYGPI GO:GO:0048208 GO:GO:0017145 EMBL:AADN02024135
IPI:IPI00576031 Ensembl:ENSGALT00000008191 Uniprot:E1BYQ3
Length = 746
Score = 572 (206.4 bits), Expect = 3.9e-89, Sum P(2) = 3.9e-89
Identities = 121/377 (32%), Positives = 215/377 (57%)
Query: 7 YEKDFEEHMLQDTGAYYSRKASNWILEDSCPEYMIKAEECLKKERDRVSHYLHSSSEPKL 66
YE+DFE L+ + ++ ++ ++ E+S Y+ K E + +E +RV H L S+E +
Sbjct: 179 YEEDFEAPFLEMSAEFFQMESQKFLAENSASVYIKKVEARINEEIERVMHCLDKSTEEPI 238
Query: 67 VEKVQHELLVVYATELLEKEQSGCRALLREDKVEDLSRMYRLYHKIPKGLEPVANVFKQH 126
V+ V+ EL+ + ++E E SG +L+ K EDL+ MY+L+ ++P GL+ + +
Sbjct: 239 VKVVERELISKHMKTIVEMENSGLVHMLKNGKTEDLACMYKLFSRVPNGLKTMCECMSSY 298
Query: 127 ITAEGTVLVQQAEDAATNQGGSSGAVQEQVLIRKIIELHDKYMEYVTNCFINHTLFHKAL 186
+ +G LV + +G V I+ +++L ++ ++ F N LF + +
Sbjct: 299 LREQGKALVSE-------EGEGKNPVD---YIQGLLDLKSRFDRFLQESFNNDRLFKQTI 348
Query: 187 KEAFEIFCNKAVGGSSSSELLATFCDNILKKGGNEKLSDEAIEETLEKVVKLLAYISDKD 246
FE F N S S E L+ F D+ LKKG + L+++ +E L+K + L ++ +KD
Sbjct: 349 AGDFEYFLNL---NSRSPEYLSLFIDDKLKKGV-KGLTEQEVETILDKAMVLFRFMQEKD 404
Query: 247 LFAEFYRKKLARRLLFDRSANDDHERSILTKLKQQCGGQFTSKMEGMVTDLTLARENQTS 306
+F +Y++ LARRLL ++S +DD E+++++KLK +CG QFTSK+EGM D++++
Sbjct: 405 VFERYYKQHLARRLLTNKSVSDDSEKNMISKLKTECGCQFTSKLEGMFRDMSISNTTMDE 464
Query: 307 FEEYLSNNQNAHPGIDLSVTVLTTGFWPSYKSSD-LNLPSEMVKCVEVFKGFYETKTKHR 365
F ++L + + G+DL+V VLTTG+WP+ ++ N+P E+F+ FY K R
Sbjct: 465 FRQHLQSTGVSLGGVDLTVRVLTTGYWPTQSATPKCNIPPAPRHAFEIFRRFYLAKHSGR 524
Query: 366 KLTWIYSLGQCNINGKF 382
+LT + +G ++N F
Sbjct: 525 QLTLQHHMGSADLNATF 541
Score = 337 (123.7 bits), Expect = 3.9e-89, Sum P(2) = 3.9e-89
Identities = 76/193 (39%), Positives = 113/193 (58%)
Query: 373 LGQCNINGKFEQKNIELIVSTYQAATLLLFNTSDRLSYSEIMTQLNLTHDDLVRLLHSLS 432
+G + G +K+I L VST+Q L+LFN ++ ++ EI + ++ +LVR L SL+
Sbjct: 555 VGGAQVTGSNTRKHI-LQVSTFQMTILMLFNNREKYTFEEIQQETDIPERELVRALQSLA 613
Query: 433 CAK--YKILLKEPNTKTISQSDHFEFNSKFTDRMRRIKIPLPPVD------ERKKIVEDV 484
C K ++L KEP +K I F N +FT ++ R+KI ERK+ + V
Sbjct: 614 CGKPTQRVLTKEPKSKEIENGHIFTVNDQFTSKLHRVKIQTVAAKQGESDPERKETRQKV 673
Query: 485 DKDRRYAIDAALVRIMKSRKVLGHQQLVSECVEQLSRMFKPDIKAIKKRMEDLITRDYLE 544
D DR++ I+AA+VRIMKSRK + H LV+E +QL F P IKKR+E LI R+YL
Sbjct: 674 DDDRKHEIEAAIVRIMKSRKKMQHNVLVAEVTQQLKARFLPSPVVIKKRIEGLIEREYLA 733
Query: 545 RDKENPNMFRYLA 557
R E+ ++ Y+A
Sbjct: 734 RTPEDRKVYTYVA 746
>UNIPROTKB|A4IHP4 [details] [associations]
symbol:cul3 "Cullin-3" species:8364 "Xenopus (Silurana)
tropicalis" [GO:0000090 "mitotic anaphase" evidence=ISS]
[GO:0000910 "cytokinesis" evidence=ISS] [GO:0005827 "polar
microtubule" evidence=ISS] [GO:0006513 "protein monoubiquitination"
evidence=ISS] [GO:0006888 "ER to Golgi vesicle-mediated transport"
evidence=ISS] [GO:0007229 "integrin-mediated signaling pathway"
evidence=ISS] [GO:0016477 "cell migration" evidence=ISS]
[GO:0016567 "protein ubiquitination" evidence=ISS] [GO:0017145
"stem cell division" evidence=ISS] [GO:0031463 "Cul3-RING ubiquitin
ligase complex" evidence=ISS] [GO:0035024 "negative regulation of
Rho protein signal transduction" evidence=ISS] [GO:0040016
"embryonic cleavage" evidence=ISS] [GO:0043149 "stress fiber
assembly" evidence=ISS] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0048208 "COPII vesicle coating" evidence=ISS] [GO:0051322
"anaphase" evidence=ISS] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=ISS] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
UniPathway:UPA00143 GO:GO:0005634 GO:GO:0043161 GO:GO:0016477
GO:GO:0000090 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0040016
GO:GO:0000910 GO:GO:0007229 GO:GO:0035024 eggNOG:COG5647
SUPFAM:SSF75632 GO:GO:0043149 GO:GO:0031463 GO:GO:0006513
InterPro:IPR016159 SUPFAM:SSF74788 GO:GO:0005827
HOGENOM:HOG000176712 KO:K03869 GO:GO:0048208 GO:GO:0017145 CTD:8452
OrthoDB:EOG4JWVCW EMBL:BC135616 RefSeq:NP_001015975.2
UniGene:Str.1179 ProteinModelPortal:A4IHP4 SMR:A4IHP4 STRING:A4IHP4
GeneID:548729 KEGG:xtr:548729 Xenbase:XB-GENE-974982 Bgee:A4IHP4
Uniprot:A4IHP4
Length = 768
Score = 571 (206.1 bits), Expect = 3.9e-89, Sum P(2) = 3.9e-89
Identities = 121/377 (32%), Positives = 214/377 (56%)
Query: 7 YEKDFEEHMLQDTGAYYSRKASNWILEDSCPEYMIKAEECLKKERDRVSHYLHSSSEPKL 66
YE+DFE L+ + ++ ++ ++ E+S Y+ K E + +E +RV H L S+E +
Sbjct: 201 YEEDFEAPFLEMSAEFFQMESQKFLAENSASVYIKKVEARINEEIERVMHCLDKSTEEPI 260
Query: 67 VEKVQHELLVVYATELLEKEQSGCRALLREDKVEDLSRMYRLYHKIPKGLEPVANVFKQH 126
V+ V+ EL+ + ++E E SG +L+ K EDL+ MY+L+ ++P GL+ + +
Sbjct: 261 VKVVERELISKHMKTIVEMENSGLVHMLKNGKTEDLACMYKLFSRVPNGLKTMCECMSLY 320
Query: 127 ITAEGTVLVQQAEDAATNQGGSSGAVQEQVLIRKIIELHDKYMEYVTNCFINHTLFHKAL 186
+ +G LV + +G V I+ +++L ++ ++ F N LF + +
Sbjct: 321 LREQGKALVSE-------EGEGKNPVD---YIQGLLDLKSRFDRFLQESFSNDRLFKQTI 370
Query: 187 KEAFEIFCNKAVGGSSSSELLATFCDNILKKGGNEKLSDEAIEETLEKVVKLLAYISDKD 246
FE F N S S E L+ F D+ LKKG + L+++ +E L+K + L ++ +KD
Sbjct: 371 AGDFEYFLNL---NSRSPEYLSLFIDDKLKKGV-KGLTEQEVESILDKAMVLFRFMQEKD 426
Query: 247 LFAEFYRKKLARRLLFDRSANDDHERSILTKLKQQCGGQFTSKMEGMVTDLTLARENQTS 306
+F +Y++ LARRLL ++S +DD E+++++KLK +CG QFTSK+EGM D++++
Sbjct: 427 VFERYYKQHLARRLLTNKSVSDDSEKNMISKLKTECGCQFTSKLEGMFRDMSISNTTMDE 486
Query: 307 FEEYLSNNQNAHPGIDLSVTVLTTGFWPSYKSSD-LNLPSEMVKCVEVFKGFYETKTKHR 365
F ++L + G+DL+V VLTTG+WP+ ++ N+P E+F+ FY K R
Sbjct: 487 FRQHLQTTGVSLGGVDLTVRVLTTGYWPTQSATPKCNIPPAPRHAFEIFRRFYLAKHSGR 546
Query: 366 KLTWIYSLGQCNINGKF 382
+LT + +G ++N F
Sbjct: 547 QLTLQHHMGSADLNATF 563
Score = 338 (124.0 bits), Expect = 3.9e-89, Sum P(2) = 3.9e-89
Identities = 76/193 (39%), Positives = 113/193 (58%)
Query: 373 LGQCNINGKFEQKNIELIVSTYQAATLLLFNTSDRLSYSEIMTQLNLTHDDLVRLLHSLS 432
+G + G +K+I L VST+Q L+LFN ++ ++ EI + ++ +LVR L SL+
Sbjct: 577 VGGAQVTGSNTRKHI-LQVSTFQMTILMLFNNREKYTFEEIQQETDIPERELVRALQSLA 635
Query: 433 CAK--YKILLKEPNTKTISQSDHFEFNSKFTDRMRRIKIPLPPVD------ERKKIVEDV 484
C K ++L KEP +K I F N +FT ++ R+KI ERK+ + V
Sbjct: 636 CGKPTQRVLTKEPKSKEIESGHMFTVNDQFTSKLHRVKIQTVAAKQGESDPERKETRQKV 695
Query: 485 DKDRRYAIDAALVRIMKSRKVLGHQQLVSECVEQLSRMFKPDIKAIKKRMEDLITRDYLE 544
D DR++ I+AA+VRIMKSRK + H LV+E +QL F P IKKR+E LI R+YL
Sbjct: 696 DDDRKHEIEAAIVRIMKSRKKMQHNVLVAEVTQQLKARFLPSPVVIKKRIEGLIEREYLA 755
Query: 545 RDKENPNMFRYLA 557
R E+ ++ Y+A
Sbjct: 756 RTPEDRKVYTYVA 768
>UNIPROTKB|E1BIN5 [details] [associations]
symbol:CUL3 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0048208 "COPII vesicle coating" evidence=IEA]
[GO:0043149 "stress fiber assembly" evidence=IEA] [GO:0040016
"embryonic cleavage" evidence=IEA] [GO:0035024 "negative regulation
of Rho protein signal transduction" evidence=IEA] [GO:0031463
"Cul3-RING ubiquitin ligase complex" evidence=IEA] [GO:0030332
"cyclin binding" evidence=IEA] [GO:0017145 "stem cell division"
evidence=IEA] [GO:0016477 "cell migration" evidence=IEA]
[GO:0016055 "Wnt receptor signaling pathway" evidence=IEA]
[GO:0008054 "cyclin catabolic process" evidence=IEA] [GO:0007369
"gastrulation" evidence=IEA] [GO:0007229 "integrin-mediated
signaling pathway" evidence=IEA] [GO:0006513 "protein
monoubiquitination" evidence=IEA] [GO:0005827 "polar microtubule"
evidence=IEA] [GO:0005794 "Golgi apparatus" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=IEA] [GO:0001831 "trophectodermal
cellular morphogenesis" evidence=IEA] [GO:0000910 "cytokinesis"
evidence=IEA] [GO:0000090 "mitotic anaphase" evidence=IEA]
[GO:0031625 "ubiquitin protein ligase binding" evidence=IEA]
InterPro:IPR001373 InterPro:IPR016157 InterPro:IPR016158
InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557 PROSITE:PS01256
PROSITE:PS50069 SMART:SM00182 SMART:SM00884 GO:GO:0005634
GO:GO:0005794 GO:GO:0016477 GO:GO:0000090 GO:GO:0016055
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0040016 GO:GO:0000910
GO:GO:0007229 GO:GO:0035024 GO:GO:0004842 GO:GO:0008054
SUPFAM:SSF75632 GO:GO:0007369 GO:GO:0043149 GO:GO:0031463
GO:GO:0006513 InterPro:IPR016159 SUPFAM:SSF74788
GeneTree:ENSGT00550000074299 GO:GO:0005827 KO:K03869 OMA:ATFYGPI
GO:GO:0048208 GO:GO:0017145 CTD:8452 GO:GO:0001831
EMBL:DAAA02006055 EMBL:DAAA02006056 EMBL:DAAA02006057
EMBL:DAAA02006058 EMBL:DAAA02006059 IPI:IPI00712202
RefSeq:NP_001179735.1 UniGene:Bt.64031 PRIDE:E1BIN5
Ensembl:ENSBTAT00000029018 GeneID:534325 KEGG:bta:534325
NextBio:20876357 Uniprot:E1BIN5
Length = 768
Score = 569 (205.4 bits), Expect = 8.0e-89, Sum P(2) = 8.0e-89
Identities = 121/377 (32%), Positives = 214/377 (56%)
Query: 7 YEKDFEEHMLQDTGAYYSRKASNWILEDSCPEYMIKAEECLKKERDRVSHYLHSSSEPKL 66
YE+DFE L+ + ++ ++ ++ E+S Y+ K E + +E +RV H L S+E +
Sbjct: 201 YEEDFEAPFLEMSAEFFQMESQKFLAENSASVYIKKVEARINEEIERVMHCLDKSTEEPI 260
Query: 67 VEKVQHELLVVYATELLEKEQSGCRALLREDKVEDLSRMYRLYHKIPKGLEPVANVFKQH 126
V+ V+ EL+ + ++E E SG +L+ K EDL+ MY+L+ ++P GL+ + +
Sbjct: 261 VKVVERELISKHMKTIVEMENSGLVHMLKNGKTEDLACMYKLFSRVPNGLKTMCECMSSY 320
Query: 127 ITAEGTVLVQQAEDAATNQGGSSGAVQEQVLIRKIIELHDKYMEYVTNCFINHTLFHKAL 186
+ +G LV + +G V I+ +++L ++ ++ F N LF + +
Sbjct: 321 LREQGKALVSE-------EGEGKNPVD---YIQGLLDLKSRFDRFLQESFNNDRLFKQTI 370
Query: 187 KEAFEIFCNKAVGGSSSSELLATFCDNILKKGGNEKLSDEAIEETLEKVVKLLAYISDKD 246
FE F N S S E L+ F D+ LKKG + L+++ +E L+K + L ++ +KD
Sbjct: 371 AGDFEYFLNL---NSRSPEYLSLFIDDKLKKGV-KGLTEQEVETILDKAMVLFRFMQEKD 426
Query: 247 LFAEFYRKKLARRLLFDRSANDDHERSILTKLKQQCGGQFTSKMEGMVTDLTLARENQTS 306
+F +Y++ LARRLL ++S +DD E+++++KLK +CG QFTSK+EGM D++++
Sbjct: 427 VFERYYKQHLARRLLTNKSVSDDSEKNMISKLKTECGCQFTSKLEGMFRDMSISNTTMDE 486
Query: 307 FEEYLSNNQNAHPGIDLSVTVLTTGFWPSYKSSD-LNLPSEMVKCVEVFKGFYETKTKHR 365
F ++L + G+DL+V VLTTG+WP+ ++ N+P E+F+ FY K R
Sbjct: 487 FRQHLQATGVSLGGVDLTVRVLTTGYWPTQSATPKCNIPPAPRHAFEIFRRFYLAKHSGR 546
Query: 366 KLTWIYSLGQCNINGKF 382
+LT + +G ++N F
Sbjct: 547 QLTLQHHMGSADLNATF 563
Score = 337 (123.7 bits), Expect = 8.0e-89, Sum P(2) = 8.0e-89
Identities = 76/193 (39%), Positives = 113/193 (58%)
Query: 373 LGQCNINGKFEQKNIELIVSTYQAATLLLFNTSDRLSYSEIMTQLNLTHDDLVRLLHSLS 432
+G + G +K+I L VST+Q L+LFN ++ ++ EI + ++ +LVR L SL+
Sbjct: 577 VGGAQVTGSNTRKHI-LQVSTFQMTILMLFNNREKYTFEEIQQETDIPERELVRALQSLA 635
Query: 433 CAK--YKILLKEPNTKTISQSDHFEFNSKFTDRMRRIKIPLPPVD------ERKKIVEDV 484
C K ++L KEP +K I F N +FT ++ R+KI ERK+ + V
Sbjct: 636 CGKPTQRVLTKEPKSKEIENGHIFTVNDQFTSKLHRVKIQTVAAKQGESDPERKETRQKV 695
Query: 485 DKDRRYAIDAALVRIMKSRKVLGHQQLVSECVEQLSRMFKPDIKAIKKRMEDLITRDYLE 544
D DR++ I+AA+VRIMKSRK + H LV+E +QL F P IKKR+E LI R+YL
Sbjct: 696 DDDRKHEIEAAIVRIMKSRKKMQHNVLVAEVTQQLKARFLPSPVVIKKRIEGLIEREYLA 755
Query: 545 RDKENPNMFRYLA 557
R E+ ++ Y+A
Sbjct: 756 RTPEDRKVYTYVA 768
>UNIPROTKB|F1PU58 [details] [associations]
symbol:CUL3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0048208 "COPII vesicle coating" evidence=IEA]
[GO:0043149 "stress fiber assembly" evidence=IEA] [GO:0040016
"embryonic cleavage" evidence=IEA] [GO:0035024 "negative regulation
of Rho protein signal transduction" evidence=IEA] [GO:0031463
"Cul3-RING ubiquitin ligase complex" evidence=IEA] [GO:0030332
"cyclin binding" evidence=IEA] [GO:0017145 "stem cell division"
evidence=IEA] [GO:0016477 "cell migration" evidence=IEA]
[GO:0016055 "Wnt receptor signaling pathway" evidence=IEA]
[GO:0008054 "cyclin catabolic process" evidence=IEA] [GO:0007369
"gastrulation" evidence=IEA] [GO:0007229 "integrin-mediated
signaling pathway" evidence=IEA] [GO:0006513 "protein
monoubiquitination" evidence=IEA] [GO:0005827 "polar microtubule"
evidence=IEA] [GO:0005794 "Golgi apparatus" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=IEA] [GO:0001831 "trophectodermal
cellular morphogenesis" evidence=IEA] [GO:0000910 "cytokinesis"
evidence=IEA] [GO:0000090 "mitotic anaphase" evidence=IEA]
[GO:0031625 "ubiquitin protein ligase binding" evidence=IEA]
InterPro:IPR001373 InterPro:IPR016157 InterPro:IPR016158
InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557 PROSITE:PS01256
PROSITE:PS50069 SMART:SM00182 SMART:SM00884 GO:GO:0005634
GO:GO:0005794 GO:GO:0016477 GO:GO:0000090 GO:GO:0016055
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0040016 GO:GO:0000910
GO:GO:0007229 GO:GO:0035024 GO:GO:0004842 GO:GO:0008054
SUPFAM:SSF75632 GO:GO:0007369 GO:GO:0043149 GO:GO:0031463
GO:GO:0006513 InterPro:IPR016159 SUPFAM:SSF74788
GeneTree:ENSGT00550000074299 GO:GO:0005827 OMA:ATFYGPI
GO:GO:0048208 GO:GO:0017145 GO:GO:0001831 EMBL:AAEX03014406
ProteinModelPortal:F1PU58 Ensembl:ENSCAFT00000016275 Uniprot:F1PU58
Length = 750
Score = 569 (205.4 bits), Expect = 8.0e-89, Sum P(2) = 8.0e-89
Identities = 121/377 (32%), Positives = 214/377 (56%)
Query: 7 YEKDFEEHMLQDTGAYYSRKASNWILEDSCPEYMIKAEECLKKERDRVSHYLHSSSEPKL 66
YE+DFE L+ + ++ ++ ++ E+S Y+ K E + +E +RV H L S+E +
Sbjct: 183 YEEDFEAPFLEMSAEFFQMESQKFLAENSASVYIKKVEARINEEIERVMHCLDKSTEEPI 242
Query: 67 VEKVQHELLVVYATELLEKEQSGCRALLREDKVEDLSRMYRLYHKIPKGLEPVANVFKQH 126
V+ V+ EL+ + ++E E SG +L+ K EDL+ MY+L+ ++P GL+ + +
Sbjct: 243 VKVVERELISKHMKTIVEMENSGLVHMLKNGKTEDLACMYKLFSRVPNGLKTMCECMSSY 302
Query: 127 ITAEGTVLVQQAEDAATNQGGSSGAVQEQVLIRKIIELHDKYMEYVTNCFINHTLFHKAL 186
+ +G LV + +G V I+ +++L ++ ++ F N LF + +
Sbjct: 303 LREQGKALVSE-------EGEGKNPVD---YIQGLLDLKSRFDRFLQESFNNDRLFKQTI 352
Query: 187 KEAFEIFCNKAVGGSSSSELLATFCDNILKKGGNEKLSDEAIEETLEKVVKLLAYISDKD 246
FE F N S S E L+ F D+ LKKG + L+++ +E L+K + L ++ +KD
Sbjct: 353 AGDFEYFLNL---NSRSPEYLSLFIDDKLKKGV-KGLTEQEVETILDKAMVLFRFMQEKD 408
Query: 247 LFAEFYRKKLARRLLFDRSANDDHERSILTKLKQQCGGQFTSKMEGMVTDLTLARENQTS 306
+F +Y++ LARRLL ++S +DD E+++++KLK +CG QFTSK+EGM D++++
Sbjct: 409 VFERYYKQHLARRLLTNKSVSDDSEKNMISKLKTECGCQFTSKLEGMFRDMSISNTTMDE 468
Query: 307 FEEYLSNNQNAHPGIDLSVTVLTTGFWPSYKSSD-LNLPSEMVKCVEVFKGFYETKTKHR 365
F ++L + G+DL+V VLTTG+WP+ ++ N+P E+F+ FY K R
Sbjct: 469 FRQHLQATGVSLGGVDLTVRVLTTGYWPTQSATPKCNIPPAPRHAFEIFRRFYLAKHSGR 528
Query: 366 KLTWIYSLGQCNINGKF 382
+LT + +G ++N F
Sbjct: 529 QLTLQHHMGSADLNATF 545
Score = 337 (123.7 bits), Expect = 8.0e-89, Sum P(2) = 8.0e-89
Identities = 76/193 (39%), Positives = 113/193 (58%)
Query: 373 LGQCNINGKFEQKNIELIVSTYQAATLLLFNTSDRLSYSEIMTQLNLTHDDLVRLLHSLS 432
+G + G +K+I L VST+Q L+LFN ++ ++ EI + ++ +LVR L SL+
Sbjct: 559 VGGAQVTGSNTRKHI-LQVSTFQMTILMLFNNREKYTFEEIQQETDIPERELVRALQSLA 617
Query: 433 CAK--YKILLKEPNTKTISQSDHFEFNSKFTDRMRRIKIPLPPVD------ERKKIVEDV 484
C K ++L KEP +K I F N +FT ++ R+KI ERK+ + V
Sbjct: 618 CGKPTQRVLTKEPKSKEIENGHIFTVNDQFTSKLHRVKIQTVAAKQGESDPERKETRQKV 677
Query: 485 DKDRRYAIDAALVRIMKSRKVLGHQQLVSECVEQLSRMFKPDIKAIKKRMEDLITRDYLE 544
D DR++ I+AA+VRIMKSRK + H LV+E +QL F P IKKR+E LI R+YL
Sbjct: 678 DDDRKHEIEAAIVRIMKSRKKMQHNVLVAEVTQQLKARFLPSPVVIKKRIEGLIEREYLA 737
Query: 545 RDKENPNMFRYLA 557
R E+ ++ Y+A
Sbjct: 738 RTPEDRKVYTYVA 750
>RGD|1308190 [details] [associations]
symbol:Cul3 "cullin 3" species:10116 "Rattus norvegicus"
[GO:0000090 "mitotic anaphase" evidence=IEA;ISO] [GO:0000209
"protein polyubiquitination" evidence=ISO;ISS] [GO:0000902 "cell
morphogenesis" evidence=ISO] [GO:0000910 "cytokinesis"
evidence=IEA;ISO] [GO:0001701 "in utero embryonic development"
evidence=ISO] [GO:0001831 "trophectodermal cellular morphogenesis"
evidence=IEA;ISO] [GO:0003674 "molecular_function" evidence=ND]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=ISO;ISS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005575
"cellular_component" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA;ISO] [GO:0005794 "Golgi apparatus" evidence=IEA;ISO]
[GO:0005827 "polar microtubule" evidence=IEA;ISO] [GO:0006513
"protein monoubiquitination" evidence=ISO;ISS] [GO:0006888 "ER to
Golgi vesicle-mediated transport" evidence=ISO;ISS] [GO:0007229
"integrin-mediated signaling pathway" evidence=ISO;ISS] [GO:0007369
"gastrulation" evidence=IEA;ISO] [GO:0008054 "cyclin catabolic
process" evidence=IEA;ISO] [GO:0008150 "biological_process"
evidence=ND] [GO:0016055 "Wnt receptor signaling pathway"
evidence=IEA;ISO] [GO:0016477 "cell migration" evidence=IEA;ISO]
[GO:0016567 "protein ubiquitination" evidence=ISO] [GO:0017145
"stem cell division" evidence=ISO;ISS] [GO:0030332 "cyclin binding"
evidence=IEA;ISO] [GO:0031208 "POZ domain binding"
evidence=ISO;ISS] [GO:0031463 "Cul3-RING ubiquitin ligase complex"
evidence=ISO;ISS] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0032467 "positive regulation of cytokinesis"
evidence=ISO;ISS] [GO:0035024 "negative regulation of Rho protein
signal transduction" evidence=IEA;ISO] [GO:0040016 "embryonic
cleavage" evidence=ISO;ISS] [GO:0043149 "stress fiber assembly"
evidence=IEA;ISO] [GO:0043161 "proteasomal ubiquitin-dependent
protein catabolic process" evidence=ISO;ISS] [GO:0048208 "COPII
vesicle coating" evidence=ISO;ISS] [GO:0051322 "anaphase"
evidence=ISO] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
UniPathway:UPA00143 RGD:1308190 GO:GO:0005634 GO:GO:0005794
GO:GO:0016477 GO:GO:0000090 GO:GO:0016055 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0040016 GO:GO:0000910 GO:GO:0007229
GO:GO:0035024 GO:GO:0004842 eggNOG:COG5647 GO:GO:0008054
SUPFAM:SSF75632 GO:GO:0007369 GO:GO:0043149 GO:GO:0031463
GO:GO:0006513 InterPro:IPR016159 SUPFAM:SSF74788
GeneTree:ENSGT00550000074299 GO:GO:0005827 HOGENOM:HOG000176712
OMA:ATFYGPI GO:GO:0048208 GO:GO:0017145 HOVERGEN:HBG003619
OrthoDB:EOG4JWVCW GO:GO:0001831 EMBL:BC168969 IPI:IPI00209412
UniGene:Rn.101949 STRING:B5DF89 PRIDE:B5DF89
Ensembl:ENSRNOT00000021528 UCSC:RGD:1308190 Genevestigator:B5DF89
Uniprot:B5DF89
Length = 768
Score = 569 (205.4 bits), Expect = 8.0e-89, Sum P(2) = 8.0e-89
Identities = 121/377 (32%), Positives = 214/377 (56%)
Query: 7 YEKDFEEHMLQDTGAYYSRKASNWILEDSCPEYMIKAEECLKKERDRVSHYLHSSSEPKL 66
YE+DFE L+ + ++ ++ ++ E+S Y+ K E + +E +RV H L S+E +
Sbjct: 201 YEEDFEAPFLEMSAEFFQMESQKFLAENSASVYIKKVEARINEEIERVMHCLDKSTEEPI 260
Query: 67 VEKVQHELLVVYATELLEKEQSGCRALLREDKVEDLSRMYRLYHKIPKGLEPVANVFKQH 126
V+ V+ EL+ + ++E E SG +L+ K EDL+ MY+L+ ++P GL+ + +
Sbjct: 261 VKVVERELISKHMKTIVEMENSGLVHMLKNGKTEDLACMYKLFSRVPNGLKTMCECMSSY 320
Query: 127 ITAEGTVLVQQAEDAATNQGGSSGAVQEQVLIRKIIELHDKYMEYVTNCFINHTLFHKAL 186
+ +G LV + +G V I+ +++L ++ ++ F N LF + +
Sbjct: 321 LREQGKALVSE-------EGEGKNPVD---YIQGLLDLKSRFDRFLQESFNNDRLFKQTI 370
Query: 187 KEAFEIFCNKAVGGSSSSELLATFCDNILKKGGNEKLSDEAIEETLEKVVKLLAYISDKD 246
FE F N S S E L+ F D+ LKKG + L+++ +E L+K + L ++ +KD
Sbjct: 371 AGDFEYFLNL---NSRSPEYLSLFIDDKLKKGV-KGLTEQEVETILDKAMVLFRFMQEKD 426
Query: 247 LFAEFYRKKLARRLLFDRSANDDHERSILTKLKQQCGGQFTSKMEGMVTDLTLARENQTS 306
+F +Y++ LARRLL ++S +DD E+++++KLK +CG QFTSK+EGM D++++
Sbjct: 427 VFERYYKQHLARRLLTNKSVSDDSEKNMISKLKTECGCQFTSKLEGMFRDMSISNTTMDE 486
Query: 307 FEEYLSNNQNAHPGIDLSVTVLTTGFWPSYKSSD-LNLPSEMVKCVEVFKGFYETKTKHR 365
F ++L + G+DL+V VLTTG+WP+ ++ N+P E+F+ FY K R
Sbjct: 487 FRQHLQATGVSLGGVDLTVRVLTTGYWPTQSATPKCNIPPAPRHAFEIFRRFYLAKHSGR 546
Query: 366 KLTWIYSLGQCNINGKF 382
+LT + +G ++N F
Sbjct: 547 QLTLQHHMGSADLNATF 563
Score = 337 (123.7 bits), Expect = 8.0e-89, Sum P(2) = 8.0e-89
Identities = 76/193 (39%), Positives = 113/193 (58%)
Query: 373 LGQCNINGKFEQKNIELIVSTYQAATLLLFNTSDRLSYSEIMTQLNLTHDDLVRLLHSLS 432
+G + G +K+I L VST+Q L+LFN ++ ++ EI + ++ +LVR L SL+
Sbjct: 577 VGGAQVTGSNTRKHI-LQVSTFQMTILMLFNNREKYTFEEIQQETDIPERELVRALQSLA 635
Query: 433 CAK--YKILLKEPNTKTISQSDHFEFNSKFTDRMRRIKIPLPPVD------ERKKIVEDV 484
C K ++L KEP +K I F N +FT ++ R+KI ERK+ + V
Sbjct: 636 CGKPTQRVLTKEPKSKEIESGHIFTVNDQFTSKLHRVKIQTVAAKQGESDPERKETRQKV 695
Query: 485 DKDRRYAIDAALVRIMKSRKVLGHQQLVSECVEQLSRMFKPDIKAIKKRMEDLITRDYLE 544
D DR++ I+AA+VRIMKSRK + H LV+E +QL F P IKKR+E LI R+YL
Sbjct: 696 DDDRKHEIEAAIVRIMKSRKKMQHNVLVAEVTQQLKARFLPSPVVIKKRIEGLIEREYLA 755
Query: 545 RDKENPNMFRYLA 557
R E+ ++ Y+A
Sbjct: 756 RTPEDRKVYTYVA 768
>ZFIN|ZDB-GENE-030131-3376 [details] [associations]
symbol:cul3a "cullin 3a" species:7955 "Danio
rerio" [GO:0031461 "cullin-RING ubiquitin ligase complex"
evidence=IEA] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
ZFIN:ZDB-GENE-030131-3376 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0006511 SUPFAM:SSF75632 GO:GO:0031461 InterPro:IPR016159
SUPFAM:SSF74788 KO:K03869 HOVERGEN:HBG003619 EMBL:AY423034
IPI:IPI00921732 RefSeq:NP_955985.1 UniGene:Dr.75956
ProteinModelPortal:Q6TEL5 SMR:Q6TEL5 STRING:Q6TEL5 GeneID:324655
KEGG:dre:324655 CTD:324655 InParanoid:Q6TEL5 NextBio:20808899
ArrayExpress:Q6TEL5 Uniprot:Q6TEL5
Length = 766
Score = 572 (206.4 bits), Expect = 1.0e-88, Sum P(2) = 1.0e-88
Identities = 123/377 (32%), Positives = 214/377 (56%)
Query: 7 YEKDFEEHMLQDTGAYYSRKASNWILEDSCPEYMIKAEECLKKERDRVSHYLHSSSEPKL 66
YE+DFE L + ++ ++ ++ E+S Y+ K E + +E +RV H L S+E +
Sbjct: 199 YEEDFEIPFLDMSAEFFQMESQKFLAENSASVYIKKVEARINEEIERVMHCLDKSTEEPI 258
Query: 67 VEKVQHELLVVYATELLEKEQSGCRALLREDKVEDLSRMYRLYHKIPKGLEPVANVFKQH 126
V+ V+ EL+ + ++E E SG +L+ K EDL+ MY+L+ ++P GL+ + +
Sbjct: 259 VKVVERELISKHMKTIVEMENSGLVHMLKNGKTEDLACMYKLFGRVPNGLKTMCECMSWY 318
Query: 127 ITAEGTVLVQQAEDAATNQGGSSGAVQEQVLIRKIIELHDKYMEYVTNCFINHTLFHKAL 186
+ +G LV + +G V I+ +++L ++ ++ F N LF + +
Sbjct: 319 LREQGKALVSE-------EGEGKNPVD---YIQGLLDLKSRFDRFLQESFNNDRLFKQTI 368
Query: 187 KEAFEIFCNKAVGGSSSSELLATFCDNILKKGGNEKLSDEAIEETLEKVVKLLAYISDKD 246
FE F N S S E L+ F D+ LKKG + L+++ +E L+K + L ++ +KD
Sbjct: 369 AGDFEYFLNL---NSRSPEYLSLFIDDKLKKGV-KGLTEQEVESILDKAMVLFRFMQEKD 424
Query: 247 LFAEFYRKKLARRLLFDRSANDDHERSILTKLKQQCGGQFTSKMEGMVTDLTLARENQTS 306
+F +Y++ LARRLL ++S +DD E+++++KLK +CG QFTSK+EGM D++++
Sbjct: 425 VFERYYKQHLARRLLTNKSVSDDSEKNMISKLKTECGCQFTSKLEGMFRDMSISNTTMDE 484
Query: 307 FEEYLSNNQNAHPGIDLSVTVLTTGFWPSYKSSD-LNLPSEMVKCVEVFKGFYETKTKHR 365
F +L +Q + G+DL+V VLTTG+WP+ ++ N+P EVF+ FY K R
Sbjct: 485 FRHHLQTSQVSLCGVDLTVRVLTTGYWPTQSATPKCNIPPSPRHAFEVFRRFYLAKHSGR 544
Query: 366 KLTWIYSLGQCNINGKF 382
+LT + +G ++N F
Sbjct: 545 QLTLQHHMGSADLNATF 561
Score = 333 (122.3 bits), Expect = 1.0e-88, Sum P(2) = 1.0e-88
Identities = 76/193 (39%), Positives = 113/193 (58%)
Query: 373 LGQCNINGKFEQKNIELIVSTYQAATLLLFNTSDRLSYSEIMTQLNLTHDDLVRLLHSLS 432
+G + G +K+I L VST+Q L+LFN ++ ++ EI + ++ +LVR L SL+
Sbjct: 575 VGGALLTGSNTRKHI-LQVSTFQMTILMLFNNREKFTFEEIQQETDIPERELVRALQSLA 633
Query: 433 CAK--YKILLKEPNTKTISQSDHFEFNSKFTDRMRRIKIPLPPVD------ERKKIVEDV 484
C K ++L KEP +K I F N +FT ++ R+KI ERK+ + V
Sbjct: 634 CGKPTQRVLTKEPKSKEIESGHVFTVNDQFTSKLHRVKIQTVAAKQGESDPERKETRQKV 693
Query: 485 DKDRRYAIDAALVRIMKSRKVLGHQQLVSECVEQLSRMFKPDIKAIKKRMEDLITRDYLE 544
D DR++ I+AA+VRIMKSRK + H LV+E +QL F P IKKR+E LI R+YL
Sbjct: 694 DDDRKHEIEAAIVRIMKSRKKMQHNVLVAEVTQQLRARFLPSPVVIKKRIEGLIEREYLA 753
Query: 545 RDKENPNMFRYLA 557
R E+ ++ Y+A
Sbjct: 754 RTPEDRKVYTYVA 766
>UNIPROTKB|Q13618 [details] [associations]
symbol:CUL3 "Cullin-3" species:9606 "Homo sapiens"
[GO:0031625 "ubiquitin protein ligase binding" evidence=IEA]
[GO:0001831 "trophectodermal cellular morphogenesis" evidence=IEA]
[GO:0007369 "gastrulation" evidence=IEA] [GO:0016055 "Wnt receptor
signaling pathway" evidence=IEA] [GO:0030332 "cyclin binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005794
"Golgi apparatus" evidence=IEA] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=IDA] [GO:0016567 "protein ubiquitination"
evidence=IDA] [GO:0031463 "Cul3-RING ubiquitin ligase complex"
evidence=IDA] [GO:0000090 "mitotic anaphase" evidence=IMP]
[GO:0000910 "cytokinesis" evidence=IMP] [GO:0005827 "polar
microtubule" evidence=IDA] [GO:0051322 "anaphase" evidence=IMP]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=IDA] [GO:0035024 "negative regulation of Rho
protein signal transduction" evidence=IMP] [GO:0043149 "stress
fiber assembly" evidence=IMP] [GO:0016477 "cell migration"
evidence=IMP] [GO:0005515 "protein binding" evidence=IPI]
[GO:0006888 "ER to Golgi vesicle-mediated transport" evidence=IDA]
[GO:0006513 "protein monoubiquitination" evidence=IDA] [GO:0048208
"COPII vesicle coating" evidence=IMP] [GO:0007229
"integrin-mediated signaling pathway" evidence=ISS] [GO:0017145
"stem cell division" evidence=ISS] [GO:0040016 "embryonic cleavage"
evidence=ISS] [GO:0032467 "positive regulation of cytokinesis"
evidence=IMP] [GO:0000209 "protein polyubiquitination"
evidence=IDA] [GO:0031208 "POZ domain binding" evidence=IDA]
[GO:0000082 "G1/S transition of mitotic cell cycle" evidence=TAS]
[GO:0008284 "positive regulation of cell proliferation"
evidence=TAS] [GO:0097193 "intrinsic apoptotic signaling pathway"
evidence=TAS] [GO:0008054 "cyclin catabolic process" evidence=IDA]
[GO:0007050 "cell cycle arrest" evidence=TAS] InterPro:IPR001373
InterPro:IPR016157 InterPro:IPR016158 InterPro:IPR019559
Pfam:PF00888 Pfam:PF10557 PROSITE:PS01256 PROSITE:PS50069
SMART:SM00182 SMART:SM00884 UniPathway:UPA00143 GO:GO:0005634
GO:GO:0005794 Reactome:REACT_6900
Pathway_Interaction_DB:aurora_b_pathway GO:GO:0016477 GO:GO:0000090
GO:GO:0016055 GO:GO:0000082 GO:GO:0008284 EMBL:CH471063
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0007050 GO:GO:0040016
GO:GO:0000910 GO:GO:0007229 GO:GO:0035024 GO:GO:0097193
eggNOG:COG5647 GO:GO:0008054 SUPFAM:SSF75632 GO:GO:0007369
GO:GO:0043149 GO:GO:0031463 GO:GO:0006513 InterPro:IPR016159
SUPFAM:SSF74788 GO:GO:0005827 KO:K03869 OMA:ATFYGPI GO:GO:0048208
GO:GO:0017145 EMBL:AF064087 EMBL:AB014517 EMBL:AF062537
EMBL:AY337761 EMBL:AK291151 EMBL:AC073052 EMBL:AC092679
EMBL:BC031844 EMBL:BC039598 EMBL:BC092409 EMBL:U58089 EMBL:AF052147
IPI:IPI00014312 IPI:IPI00382458 IPI:IPI00382459
RefSeq:NP_001244126.1 RefSeq:NP_001244127.1 RefSeq:NP_003581.1
UniGene:Hs.372286 PDB:4AP2 PDB:4APF PDB:4EOZ PDBsum:4AP2
PDBsum:4APF PDBsum:4EOZ ProteinModelPortal:Q13618 SMR:Q13618
DIP:DIP-31611N IntAct:Q13618 STRING:Q13618 PhosphoSite:Q13618
DMDM:12643396 PaxDb:Q13618 PRIDE:Q13618 Ensembl:ENST00000264414
Ensembl:ENST00000344951 Ensembl:ENST00000409096
Ensembl:ENST00000409777 GeneID:8452 KEGG:hsa:8452 UCSC:uc002vny.2
UCSC:uc010zls.1 CTD:8452 GeneCards:GC02M225298 HGNC:HGNC:2553
HPA:CAB002678 MIM:603136 MIM:614496 neXtProt:NX_Q13618
Orphanet:300530 PharmGKB:PA27049 HOVERGEN:HBG003619
InParanoid:Q13618 OrthoDB:EOG4JWVCW PhylomeDB:Q13618 ChiTaRS:CUL3
GenomeRNAi:8452 NextBio:31630 ArrayExpress:Q13618 Bgee:Q13618
CleanEx:HS_CUL3 Genevestigator:Q13618 GermOnline:ENSG00000036257
GO:GO:0001831 Uniprot:Q13618
Length = 768
Score = 568 (205.0 bits), Expect = 1.0e-88, Sum P(2) = 1.0e-88
Identities = 121/377 (32%), Positives = 213/377 (56%)
Query: 7 YEKDFEEHMLQDTGAYYSRKASNWILEDSCPEYMIKAEECLKKERDRVSHYLHSSSEPKL 66
YE+DFE L+ + ++ ++ ++ E+S Y+ K E + +E +RV H L S+E +
Sbjct: 201 YEEDFEAPFLEMSAEFFQMESQKFLAENSASVYIKKVEARINEEIERVMHCLDKSTEEPI 260
Query: 67 VEKVQHELLVVYATELLEKEQSGCRALLREDKVEDLSRMYRLYHKIPKGLEPVANVFKQH 126
V+ V+ EL+ + ++E E SG +L+ K EDL MY+L+ ++P GL+ + +
Sbjct: 261 VKVVERELISKHMKTIVEMENSGLVHMLKNGKTEDLGCMYKLFSRVPNGLKTMCECMSSY 320
Query: 127 ITAEGTVLVQQAEDAATNQGGSSGAVQEQVLIRKIIELHDKYMEYVTNCFINHTLFHKAL 186
+ +G LV + +G V I+ +++L ++ ++ F N LF + +
Sbjct: 321 LREQGKALVSE-------EGEGKNPVD---YIQGLLDLKSRFDRFLLESFNNDRLFKQTI 370
Query: 187 KEAFEIFCNKAVGGSSSSELLATFCDNILKKGGNEKLSDEAIEETLEKVVKLLAYISDKD 246
FE F N S S E L+ F D+ LKKG + L+++ +E L+K + L ++ +KD
Sbjct: 371 AGDFEYFLNL---NSRSPEYLSLFIDDKLKKGV-KGLTEQEVETILDKAMVLFRFMQEKD 426
Query: 247 LFAEFYRKKLARRLLFDRSANDDHERSILTKLKQQCGGQFTSKMEGMVTDLTLARENQTS 306
+F +Y++ LARRLL ++S +DD E+++++KLK +CG QFTSK+EGM D++++
Sbjct: 427 VFERYYKQHLARRLLTNKSVSDDSEKNMISKLKTECGCQFTSKLEGMFRDMSISNTTMDE 486
Query: 307 FEEYLSNNQNAHPGIDLSVTVLTTGFWPSYKSSD-LNLPSEMVKCVEVFKGFYETKTKHR 365
F ++L + G+DL+V VLTTG+WP+ ++ N+P E+F+ FY K R
Sbjct: 487 FRQHLQATGVSLGGVDLTVRVLTTGYWPTQSATPKCNIPPAPRHAFEIFRRFYLAKHSGR 546
Query: 366 KLTWIYSLGQCNINGKF 382
+LT + +G ++N F
Sbjct: 547 QLTLQHHMGSADLNATF 563
Score = 337 (123.7 bits), Expect = 1.0e-88, Sum P(2) = 1.0e-88
Identities = 76/193 (39%), Positives = 113/193 (58%)
Query: 373 LGQCNINGKFEQKNIELIVSTYQAATLLLFNTSDRLSYSEIMTQLNLTHDDLVRLLHSLS 432
+G + G +K+I L VST+Q L+LFN ++ ++ EI + ++ +LVR L SL+
Sbjct: 577 VGGAQVTGSNTRKHI-LQVSTFQMTILMLFNNREKYTFEEIQQETDIPERELVRALQSLA 635
Query: 433 CAK--YKILLKEPNTKTISQSDHFEFNSKFTDRMRRIKIPLPPVD------ERKKIVEDV 484
C K ++L KEP +K I F N +FT ++ R+KI ERK+ + V
Sbjct: 636 CGKPTQRVLTKEPKSKEIENGHIFTVNDQFTSKLHRVKIQTVAAKQGESDPERKETRQKV 695
Query: 485 DKDRRYAIDAALVRIMKSRKVLGHQQLVSECVEQLSRMFKPDIKAIKKRMEDLITRDYLE 544
D DR++ I+AA+VRIMKSRK + H LV+E +QL F P IKKR+E LI R+YL
Sbjct: 696 DDDRKHEIEAAIVRIMKSRKKMQHNVLVAEVTQQLKARFLPSPVVIKKRIEGLIEREYLA 755
Query: 545 RDKENPNMFRYLA 557
R E+ ++ Y+A
Sbjct: 756 RTPEDRKVYTYVA 768
>MGI|MGI:1347360 [details] [associations]
symbol:Cul3 "cullin 3" species:10090 "Mus musculus"
[GO:0000090 "mitotic anaphase" evidence=ISO] [GO:0000209 "protein
polyubiquitination" evidence=ISO] [GO:0000902 "cell morphogenesis"
evidence=IMP] [GO:0000910 "cytokinesis" evidence=ISO] [GO:0001701
"in utero embryonic development" evidence=IMP] [GO:0001831
"trophectodermal cellular morphogenesis" evidence=IMP] [GO:0005634
"nucleus" evidence=IDA] [GO:0005794 "Golgi apparatus" evidence=IDA]
[GO:0005827 "polar microtubule" evidence=ISO] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0006513 "protein monoubiquitination" evidence=ISO] [GO:0006810
"transport" evidence=IEA] [GO:0006888 "ER to Golgi vesicle-mediated
transport" evidence=ISO] [GO:0007229 "integrin-mediated signaling
pathway" evidence=IMP] [GO:0007369 "gastrulation" evidence=IMP]
[GO:0008054 "cyclin catabolic process" evidence=ISS] [GO:0016055
"Wnt receptor signaling pathway" evidence=IDA] [GO:0016192
"vesicle-mediated transport" evidence=IEA] [GO:0016477 "cell
migration" evidence=ISO] [GO:0016567 "protein ubiquitination"
evidence=ISO] [GO:0017145 "stem cell division" evidence=IMP]
[GO:0030332 "cyclin binding" evidence=IPI] [GO:0031208 "POZ domain
binding" evidence=ISO] [GO:0031461 "cullin-RING ubiquitin ligase
complex" evidence=IEA] [GO:0031463 "Cul3-RING ubiquitin ligase
complex" evidence=ISO] [GO:0031625 "ubiquitin protein ligase
binding" evidence=IEA] [GO:0032467 "positive regulation of
cytokinesis" evidence=ISO] [GO:0035024 "negative regulation of Rho
protein signal transduction" evidence=ISO] [GO:0040016 "embryonic
cleavage" evidence=IMP] [GO:0043149 "stress fiber assembly"
evidence=ISO] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=ISO] [GO:0048208 "COPII vesicle
coating" evidence=ISO] [GO:0051322 "anaphase" evidence=ISO]
InterPro:IPR001373 InterPro:IPR016157 InterPro:IPR016158
InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557 PROSITE:PS01256
PROSITE:PS50069 SMART:SM00182 SMART:SM00884 UniPathway:UPA00143
MGI:MGI:1347360 GO:GO:0005634 GO:GO:0005794 GO:GO:0016477
GO:GO:0000090 GO:GO:0016055 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0040016 GO:GO:0000910 GO:GO:0007229 GO:GO:0035024
GO:GO:0004842 eggNOG:COG5647 GO:GO:0008054 SUPFAM:SSF75632
GO:GO:0007369 GO:GO:0043149 GO:GO:0031463 GO:GO:0006513
InterPro:IPR016159 SUPFAM:SSF74788 GeneTree:ENSGT00550000074299
GO:GO:0005827 KO:K03869 OMA:ATFYGPI GO:GO:0048208 GO:GO:0017145
CTD:8452 HOVERGEN:HBG003619 OrthoDB:EOG4JWVCW ChiTaRS:CUL3
GO:GO:0001831 EMBL:AF129738 EMBL:BC027304 IPI:IPI00467383
RefSeq:NP_057925.1 UniGene:Mm.12665 PDB:1IUY PDBsum:1IUY
ProteinModelPortal:Q9JLV5 SMR:Q9JLV5 IntAct:Q9JLV5 STRING:Q9JLV5
PhosphoSite:Q9JLV5 PaxDb:Q9JLV5 PRIDE:Q9JLV5
Ensembl:ENSMUST00000163119 GeneID:26554 KEGG:mmu:26554
InParanoid:Q9JLV5 EvolutionaryTrace:Q9JLV5 NextBio:304599
Bgee:Q9JLV5 CleanEx:MM_CUL3 Genevestigator:Q9JLV5
GermOnline:ENSMUSG00000004364 Uniprot:Q9JLV5
Length = 768
Score = 566 (204.3 bits), Expect = 1.7e-88, Sum P(2) = 1.7e-88
Identities = 121/377 (32%), Positives = 214/377 (56%)
Query: 7 YEKDFEEHMLQDTGAYYSRKASNWILEDSCPEYMIKAEECLKKERDRVSHYLHSSSEPKL 66
YE+DFE L+ + ++ ++ ++ E+S Y+ K E + +E +RV H L S+E +
Sbjct: 201 YEEDFEAPFLEMSAEFFQMESQKFLAENSASVYIKKVEARINEEIERVMHCLDKSTEEPI 260
Query: 67 VEKVQHELLVVYATELLEKEQSGCRALLREDKVEDLSRMYRLYHKIPKGLEPVANVFKQH 126
V+ V+ EL+ + ++E E SG +L+ K EDL+ MY+L+ ++P GL+ + +
Sbjct: 261 VKVVERELISKHMKTIVEMENSGLVHMLKNGKTEDLACMYKLFSRVPNGLKTMCECMSCY 320
Query: 127 ITAEGTVLVQQAEDAATNQGGSSGAVQEQVLIRKIIELHDKYMEYVTNCFINHTLFHKAL 186
+ +G LV + +G V I+ +++L ++ ++ F N LF + +
Sbjct: 321 LREQGKALVSE-------EGEGKNPVD---YIQGLLDLKSRFDRFLQESFNNDRLFKQTI 370
Query: 187 KEAFEIFCNKAVGGSSSSELLATFCDNILKKGGNEKLSDEAIEETLEKVVKLLAYISDKD 246
FE F N S S E L+ F D+ LKKG + L+++ +E L+K + L ++ +KD
Sbjct: 371 AGDFEYFLNL---NSRSPEYLSLFIDDKLKKGV-KGLTEQEVETILDKAMVLFRFMQEKD 426
Query: 247 LFAEFYRKKLARRLLFDRSANDDHERSILTKLKQQCGGQFTSKMEGMVTDLTLARENQTS 306
+F +Y++ LARRLL ++S +DD E+++++KLK +CG QFTSK+EGM D++++
Sbjct: 427 VFERYYKQHLARRLLTNKSVSDDSEKNMISKLKTECGCQFTSKLEGMFRDMSISNTTMDE 486
Query: 307 FEEYLSNNQNAHPGIDLSVTVLTTGFWPSYKSSD-LNLPSEMVKCVEVFKGFYETKTKHR 365
F ++L + G+DL+V VLTTG+WP+ ++ N+P E+F+ FY K R
Sbjct: 487 FRQHLQATGVSLGGVDLTVRVLTTGYWPTQSATPKCNIPPAPRHAFEIFRRFYLAKHSGR 546
Query: 366 KLTWIYSLGQCNINGKF 382
+LT + +G ++N F
Sbjct: 547 QLTLQHHMGSADLNATF 563
Score = 337 (123.7 bits), Expect = 1.7e-88, Sum P(2) = 1.7e-88
Identities = 76/193 (39%), Positives = 113/193 (58%)
Query: 373 LGQCNINGKFEQKNIELIVSTYQAATLLLFNTSDRLSYSEIMTQLNLTHDDLVRLLHSLS 432
+G + G +K+I L VST+Q L+LFN ++ ++ EI + ++ +LVR L SL+
Sbjct: 577 VGGAQVTGSNTRKHI-LQVSTFQMTILMLFNNREKYTFEEIQQETDIPERELVRALQSLA 635
Query: 433 CAK--YKILLKEPNTKTISQSDHFEFNSKFTDRMRRIKIPLPPVD------ERKKIVEDV 484
C K ++L KEP +K I F N +FT ++ R+KI ERK+ + V
Sbjct: 636 CGKPTQRVLTKEPKSKEIESGHIFTVNDQFTSKLHRVKIQTVAAKQGESDPERKETRQKV 695
Query: 485 DKDRRYAIDAALVRIMKSRKVLGHQQLVSECVEQLSRMFKPDIKAIKKRMEDLITRDYLE 544
D DR++ I+AA+VRIMKSRK + H LV+E +QL F P IKKR+E LI R+YL
Sbjct: 696 DDDRKHEIEAAIVRIMKSRKKMQHNVLVAEVTQQLKARFLPSPVVIKKRIEGLIEREYLA 755
Query: 545 RDKENPNMFRYLA 557
R E+ ++ Y+A
Sbjct: 756 RTPEDRKVYTYVA 768
>TAIR|locus:2162060 [details] [associations]
symbol:CUL4 "cullin4" species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0031461 "cullin-RING
ubiquitin ligase complex" evidence=IEA] [GO:0031625 "ubiquitin
protein ligase binding" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0009640 "photomorphogenesis" evidence=RCA;IMP]
[GO:0048366 "leaf development" evidence=RCA;IMP] [GO:0080008
"Cul4-RING ubiquitin ligase complex" evidence=IPI] [GO:0000151
"ubiquitin ligase complex" evidence=IPI] [GO:0000209 "protein
polyubiquitination" evidence=IDA] [GO:0009908 "flower development"
evidence=IMP] [GO:0010100 "negative regulation of
photomorphogenesis" evidence=RCA;IMP] [GO:0048367 "shoot system
development" evidence=IMP] [GO:0009755 "hormone-mediated signaling
pathway" evidence=RCA;IMP] [GO:0010154 "fruit development"
evidence=IMP] [GO:0010182 "sugar mediated signaling pathway"
evidence=RCA;IMP] [GO:0048825 "cotyledon development"
evidence=RCA;IMP] [GO:0006281 "DNA repair" evidence=RCA;IMP]
[GO:0048575 "short-day photoperiodism, flowering" evidence=IMP]
[GO:0005829 "cytosol" evidence=IDA] [GO:0000278 "mitotic cell
cycle" evidence=RCA] [GO:0006396 "RNA processing" evidence=RCA]
[GO:0007062 "sister chromatid cohesion" evidence=RCA] [GO:0009793
"embryo development ending in seed dormancy" evidence=RCA]
[GO:0009845 "seed germination" evidence=RCA] [GO:0009880 "embryonic
pattern specification" evidence=RCA] [GO:0009909 "regulation of
flower development" evidence=RCA] [GO:0009933 "meristem structural
organization" evidence=RCA] [GO:0010072 "primary shoot apical
meristem specification" evidence=RCA] [GO:0010162 "seed dormancy
process" evidence=RCA] [GO:0010228 "vegetative to reproductive
phase transition of meristem" evidence=RCA] [GO:0010431 "seed
maturation" evidence=RCA] [GO:0010564 "regulation of cell cycle
process" evidence=RCA] [GO:0016567 "protein ubiquitination"
evidence=RCA] [GO:0019915 "lipid storage" evidence=RCA] [GO:0045595
"regulation of cell differentiation" evidence=RCA] [GO:0048608
"reproductive structure development" evidence=RCA] [GO:0050826
"response to freezing" evidence=RCA] [GO:0051301 "cell division"
evidence=RCA] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
UniPathway:UPA00143 GO:GO:0005829 GO:GO:0005634 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0009738 GO:GO:0006281
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0009640 GO:GO:0010182
GO:GO:0009755 GO:GO:0006511 GO:GO:0009908 GO:GO:0048366
GO:GO:0000209 eggNOG:COG5647 SUPFAM:SSF75632 GO:GO:0048825
InterPro:IPR016159 SUPFAM:SSF74788 HOGENOM:HOG000176712 KO:K10609
GO:GO:0080008 GO:GO:0010100 HSSP:Q9JLV5 OMA:FEDSLDF EMBL:AJ318018
EMBL:AB025620 EMBL:AY091113 EMBL:AY084267 IPI:IPI00538554
RefSeq:NP_568658.1 UniGene:At.20972 ProteinModelPortal:Q8LGH4
SMR:Q8LGH4 DIP:DIP-40462N IntAct:Q8LGH4 STRING:Q8LGH4 PaxDb:Q8LGH4
PRIDE:Q8LGH4 EnsemblPlants:AT5G46210.1 GeneID:834663
KEGG:ath:AT5G46210 TAIR:At5g46210 InParanoid:Q8LGH4
PhylomeDB:Q8LGH4 ProtClustDB:CLSN2689940 Genevestigator:Q8LGH4
GO:GO:0048575 Uniprot:Q8LGH4
Length = 792
Score = 763 (273.6 bits), Expect = 2.1e-88, Sum P(2) = 2.1e-88
Identities = 161/386 (41%), Positives = 235/386 (60%)
Query: 176 FINHTLFHKALKEAFEIFCNKAVGGSSSSELLATFCDNILKKGGNEKLSDEAIEETLEKV 235
F + F +K++FE N + + +EL+A F D L+ GN+ S+E +E LEKV
Sbjct: 412 FYKNESFGNTIKDSFEHLIN--LRQNRPAELIAKFLDEKLR-AGNKGTSEEELESVLEKV 468
Query: 236 VKLLAYISDKDLFAEFYRKKLARRLLFDRSANDDHERSILTKLKQQCGGQFTSKMEGMVT 295
+ L +I KD+F FY+K LA+RLL +SA+ D E+S+++KLK +CG QFT+K+EGM
Sbjct: 469 LVLFRFIQGKDVFEAFYKKDLAKRLLLGKSASIDAEKSMISKLKTECGSQFTNKLEGMFK 528
Query: 296 DLTLARENQTSFEEYLSNNQNAHPGIDLSVTVLTTGFWPSYKSSDLNLPSEMVKCVEVFK 355
D+ L++E SF++ GI++SV VLTTG+WP+Y D+ LP E+ ++FK
Sbjct: 529 DIELSKEINESFKQSSQARTKLPSGIEMSVHVLTTGYWPTYPPMDVKLPHELNVYQDIFK 588
Query: 356 GFYETKTKHRKLTWIYSLGQCNINGKFEQKNIELIVSTYQAATLLLFNTSDRLSYSEIMT 415
FY +K R+L W SLG C + F + EL VS +QA L+LFN + +LS+ +I
Sbjct: 589 EFYLSKYSGRRLMWQNSLGHCVLKADFSKGKKELAVSLFQAVVLMLFNDAMKLSFEDIKD 648
Query: 416 QLNLTHDDLVRLLHSLSCAKYKILLKEPNTKTISQSDHFEFNSKFTDRMRRIKIPL---- 471
++ +L R L SL+C K ++L K P + + D FEFN +F + RIK+
Sbjct: 649 STSIEDKELRRTLQSLACGKVRVLQKNPKGRDVEDGDEFEFNDEFAAPLYRIKVNAIQMK 708
Query: 472 PPVDERKKIVEDVDKDRRYAIDAALVRIMKSRKVLGHQQLVSECVEQLSRMFKPDIKAIK 531
V+E E V +DR+Y IDAA+VRIMK+RKVL H L++E +QL KP +K
Sbjct: 709 ETVEENTSTTERVFQDRQYQIDAAIVRIMKTRKVLSHTLLITELFQQLKFPIKP--ADLK 766
Query: 532 KRMEDLITRDYLERDKENPNMFRYLA 557
KR+E LI R+YLER+K NP ++ YLA
Sbjct: 767 KRIESLIDREYLEREKSNPQIYNYLA 792
Score = 139 (54.0 bits), Expect = 2.1e-88, Sum P(2) = 2.1e-88
Identities = 34/133 (25%), Positives = 63/133 (47%)
Query: 7 YEKDFEEHMLQDTGAYYSRKASNWILEDSCPEYMIKAEECLKKERDRVSHYLHSSSEPKL 66
Y + FE+ L+ T +Y+ + ++ + PEY+ E L +E +R Y+ + + L
Sbjct: 260 YMESFEKPFLEGTSEFYAAEGMKYMQQSDVPEYLKHVEGRLHEENERCILYIDAVTRKPL 319
Query: 67 VEKVQHELLVVYATELLEKEQSGCRALLREDKVEDLSRMYRLYHKIPKGLEPVANVFKQH 126
+ V+ +LL + +LEK G L+ + EDL RM L+ ++ LE + +
Sbjct: 320 ITTVERQLLERHILVVLEK---GFTTLMDGRRTEDLQRMQTLFSRV-NALESLRQALSSY 375
Query: 127 ITAEGTVLVQQAE 139
+ G +V E
Sbjct: 376 VRKTGQKIVMDEE 388
Score = 37 (18.1 bits), Expect = 1.2e-77, Sum P(2) = 1.2e-77
Identities = 17/60 (28%), Positives = 25/60 (41%)
Query: 5 DSYEKDFEEHM---LQ-------DTGAYYSRKASNWILEDSCPEYMIKAEECLKKERDRV 54
D EK+ EEH+ LQ D + SR W +D C + ++ L +R V
Sbjct: 137 DQIEKECEEHISAALQSLVGQNTDLTVFLSRVEKCW--QDFCDQMLMIRSIALTLDRKYV 194
>UNIPROTKB|E1BQK9 [details] [associations]
symbol:CUL4B "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0031465 "Cul4B-RING ubiquitin
ligase complex" evidence=IEA] [GO:0045732 "positive regulation of
protein catabolic process" evidence=IEA] [GO:0045750 "positive
regulation of S phase of mitotic cell cycle" evidence=IEA]
InterPro:IPR001373 InterPro:IPR016157 InterPro:IPR016158
InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557 PROSITE:PS01256
PROSITE:PS50069 SMART:SM00182 SMART:SM00884 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0006511 GO:GO:0045732 SUPFAM:SSF75632
GO:GO:0045750 InterPro:IPR016159 SUPFAM:SSF74788
GeneTree:ENSGT00550000074299 OMA:FEDSLDF GO:GO:0031465
EMBL:AADN02013619 IPI:IPI00584907 Ensembl:ENSGALT00000013942
Uniprot:E1BQK9
Length = 884
Score = 873 (312.4 bits), Expect = 2.3e-87, P = 2.3e-87
Identities = 203/562 (36%), Positives = 317/562 (56%)
Query: 15 MLQDTGAYYSRKASNWILEDSCPEYMIKAEECLKKERDRVSHYLHSSSE------PKLV- 67
ML D Y + LE++ Y + + L +ER+ V YLH ++ +++
Sbjct: 344 MLSDLQIYQD-SFEHRFLEETNRLYAAEGQR-LMQERE-VPEYLHHVNKRLEEEADRIIT 400
Query: 68 ---EKVQHELLVVYATELLEKE-----QSGCRALLREDKVEDLSRMYRLYHKIPKGLEPV 119
+ Q L+ +LL + Q G LL E++++DLS +Y+L+ ++ G++ +
Sbjct: 401 YLDQSTQKPLIATVEKQLLGEHLTAILQKGLNHLLDENRIQDLSLLYQLFSRVRGGVQVL 460
Query: 120 ANVFKQHITAEGTVLVQQAEDAATNQGGSSGAVQEQVLIRKIIELHDKYMEYVTNCFINH 179
+ ++I A G+ +V E +++ +++++++ DK + CF+ +
Sbjct: 461 LQHWIEYIKAFGSTIVINPE-------------KDKTMVQELLDFKDKVDHIIDVCFLKN 507
Query: 180 TLFHKALKEAFEIFCNKAVGGSSSSELLATFCDNILKKGGNEKLSDEAIEETLEKVVKLL 239
F A+KEAFE F NK + +EL+A + D+ L+ GN++ +DE +E+ L+K++ +
Sbjct: 508 EKFVNAMKEAFETFINKRP--NKPAELIAKYVDSKLR-AGNKEATDEELEKMLDKIMIIF 564
Query: 240 AYISDKDLFAEFYRKKLARRLLFDRSANDDHERSILTKLKQQCGGQFTSKMEGMVTDLTL 299
+I KD+F FY+K LA+RLL +SA+ D E+S+L+KLK +CG FTSK+EGM D+ L
Sbjct: 565 RFIYGKDVFEAFYKKDLAKRLLVGKSASVDAEKSMLSKLKHECGAAFTSKLEGMFKDMEL 624
Query: 300 ARENQTSFEEYLSNNQNAHPGIDLSVTVLTTGFWPSYKSSDLNLPSEMVKCVEVFKGFYE 359
+++ F++ NQN I+L+V +LT G+WP+Y +++LP EMVK E+FK FY
Sbjct: 625 SKDIMIQFKQQYMQNQNVPGNIELTVNILTMGYWPTYVPMEVHLPPEMVKLQEIFKTFYL 684
Query: 360 TKTKHRKLTWIYSLGQCNINGKFEQKNIELIVSTYQAATLLLFNTSDRLSYSEIMTQLNL 419
K RKL W +LG C + +F++ EL VS +Q LL+FN + S EI +
Sbjct: 685 GKHSGRKLQWQSTLGHCVLKAEFKEGKKELQVSLFQTLVLLMFNEGEEFSLEEIKQATGI 744
Query: 420 THDDLVRLLHSLSCAKYKILLKEPNTKTISQSDHFEFNSKFTDRMRRIKIPL----PPVD 475
+L R L SL+C K ++L K P K + D F N F ++ RIKI V+
Sbjct: 745 EDGELRRTLQSLACGKARVLTKSPKGKDVEDGDKFTCNDDFRHKLFRIKINQIQMKETVE 804
Query: 476 ERKKIVEDVDKDRRYAIDAALVRIMKSRKVLGHQQLVSECVEQLSRMFKPDIKAIKKRME 535
E+ E V +DR+Y IDAA+VRIMK RK L H LVSE QL KP +KKR+E
Sbjct: 805 EQASTTERVFQDRQYQIDAAIVRIMKMRKTLSHNLLVSEVYNQLKFPVKP--ADLKKRIE 862
Query: 536 DLITRDYLERDKENPNMFRYLA 557
LI RDY+ERDKENPN + Y+A
Sbjct: 863 SLIDRDYMERDKENPNQYNYIA 884
Score = 236 (88.1 bits), Expect = 2.9e-16, P = 2.9e-16
Identities = 53/196 (27%), Positives = 105/196 (53%)
Query: 1 MGQMDSYEKDFEEHMLQDTGAYYSRKASNWILEDSCPEYMIKAEECLKKERDRVSHYLHS 60
+ + Y+ FE L++T Y+ + + E PEY+ + L++E DR+ YL
Sbjct: 345 LSDLQIYQDSFEHRFLEETNRLYAAEGQRLMQEREVPEYLHHVNKRLEEEADRIITYLDQ 404
Query: 61 SSEPKLVEKVQHELLVVYATELLEKEQSGCRALLREDKVEDLSRMYRLYHKIPKGLEPVA 120
S++ L+ V+ +LL + T +L+K G LL E++++DLS +Y+L+ ++ G++ +
Sbjct: 405 STQKPLIATVEKQLLGEHLTAILQK---GLNHLLDENRIQDLSLLYQLFSRVRGGVQVLL 461
Query: 121 NVFKQHITAEGTVLVQQAEDAATNQGGSSGAVQEQVLIRKIIELHDKYMEYVTNCFINHT 180
+ ++I A G+ +V E +++ +++++++ DK + CF+ +
Sbjct: 462 QHWIEYIKAFGSTIVINPE-------------KDKTMVQELLDFKDKVDHIIDVCFLKNE 508
Query: 181 LFHKALKEAFEIFCNK 196
F A+KEAFE F NK
Sbjct: 509 KFVNAMKEAFETFINK 524
>FB|FBgn0033260 [details] [associations]
symbol:Cul-4 "Cullin-4" species:7227 "Drosophila
melanogaster" [GO:0000152 "nuclear ubiquitin ligase complex"
evidence=ISS] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISS] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0031461 "cullin-RING ubiquitin ligase complex"
evidence=IEA] [GO:0051533 "positive regulation of NFAT protein
import into nucleus" evidence=IMP] [GO:0042787 "protein
ubiquitination involved in ubiquitin-dependent protein catabolic
process" evidence=ISS] [GO:0007307 "eggshell chorion gene
amplification" evidence=IDA] [GO:0007095 "mitotic G2 DNA damage
checkpoint" evidence=IGI] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
EMBL:AE013599 GO:GO:0007095 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0016567 GO:GO:0051533 GO:GO:0006511 GO:GO:0004842
eggNOG:COG5647 SUPFAM:SSF75632 GO:GO:0031461 InterPro:IPR016159
SUPFAM:SSF74788 GO:GO:0007307 GeneTree:ENSGT00550000074299
KO:K10609 OMA:FEDSLDF CTD:35780 EMBL:BT021374 EMBL:BT050475
RefSeq:NP_001163084.1 RefSeq:NP_610352.2 UniGene:Dm.4527 SMR:Q5BI50
IntAct:Q5BI50 STRING:Q5BI50 EnsemblMetazoa:FBtr0088821
EnsemblMetazoa:FBtr0301355 GeneID:35780 KEGG:dme:Dmel_CG8711
UCSC:CG8711-RA FlyBase:FBgn0033260 InParanoid:Q5BI50
OrthoDB:EOG4M0CGM GenomeRNAi:35780 NextBio:795178 Uniprot:Q5BI50
Length = 821
Score = 856 (306.4 bits), Expect = 1.4e-85, P = 1.4e-85
Identities = 188/502 (37%), Positives = 297/502 (59%)
Query: 66 LVEKVQHELLVVYATELLEKE-----QSGCRALLREDKVEDLSRMYRLYHKIPKGLEPVA 120
L +H L+ ELL + Q G +LL ++++ DL+ +Y L ++ G +
Sbjct: 339 LDSSTKHPLIYNVEKELLAEHLTSILQKGLDSLLEDNRLSDLTLLYGLLSRVKNGTSELC 398
Query: 121 NVFKQHITAEGTVLVQQAEDAATNQGGSSGAVQEQVLIRKIIELHDKYMEYVTNCFINHT 180
F I +G +V E +++ +++ +++ DK V CF ++
Sbjct: 399 GNFNGFIKKKGRTIVIDPE-------------KDKSMVQDLLDFKDKMDVIVRTCFEHNE 445
Query: 181 LFHKALKEAFEIFCNKAVGGSSSSELLATFCDNILKKGGNEKLSDEAIEETLEKVVKLLA 240
F +L+EAFE F N+ + +EL+A + D L+ G N+ +DE +E+TL+K++ L
Sbjct: 446 KFTNSLREAFEFFINQRA--NKPAELIAKYVDMKLRSG-NKGTTDEELEKTLDKIMVLFR 502
Query: 241 YISDKDLFAEFYRKKLARRLLFDRSANDDHERSILTKLKQQCGGQFTSKMEGMVTDLTLA 300
+I KD+F FY+K LA+RLL +SA+ D E+S+L+KLKQ+CGG FTSK+EGM D+ L+
Sbjct: 503 FIHGKDVFEAFYKKDLAKRLLVGKSASVDSEKSMLSKLKQECGGGFTSKLEGMFKDMELS 562
Query: 301 RENQTSFEEY-LSNNQNAHPGIDLSVTVLTTGFWPSYKSSDLNLPSEMVKCVEVFKGFYE 359
R+ +F + LSNN++ H +DL V++LT G+WP+Y +++ +P + + ++F FY
Sbjct: 563 RDINIAFRGHALSNNRDVH-NLDLCVSILTMGYWPTYAPTEVTMPPQFINPQQIFNKFYL 621
Query: 360 TKTKHRKLTWIYSLGQCNINGKFEQKNIELIVSTYQAATLLLFNTSDRLSYSEIMTQLNL 419
K RKL W +LG C + +F+ EL+VS +QA LLLFN LSY EI+ +
Sbjct: 622 EKHSGRKLQWQPTLGNCMLRAQFDAGPKELLVSLFQALVLLLFNDKPVLSYEEILAATLI 681
Query: 420 THDDLVRLLHSLSCAKYKILLKEPNTKTISQSDHFEFNSKFTDRMRRIKI---PLPPVDE 476
+L R L SL+C + +++ K P + I D F+FN++FT+++ RIKI + +E
Sbjct: 682 EDGELRRTLQSLACGRARVITKTPKGREILDGDQFDFNNEFTNKLFRIKINQIQMKETNE 741
Query: 477 RKKIVED-VDKDRRYAIDAALVRIMKSRKVLGHQQLVSECVEQLSRMFKPDIKAIKKRME 535
+K E+ V +DR+Y IDAA+VRIMK RK L H L++E QL+ KP +KKR+E
Sbjct: 742 EQKATEERVFQDRQYQIDAAIVRIMKMRKTLSHNLLITELFNQLTFPVKP--ADLKKRIE 799
Query: 536 DLITRDYLERDKENPNMFRYLA 557
LI RDY+ERDK+N N + Y+A
Sbjct: 800 SLIDRDYMERDKDNQNQYNYVA 821
Score = 213 (80.0 bits), Expect = 8.5e-14, P = 8.5e-14
Identities = 53/190 (27%), Positives = 94/190 (49%)
Query: 7 YEKDFEEHMLQDTGAYYSRKASNWILEDSCPEYMIKAEECLKKERDRVSHYLHSSSEPKL 66
Y FEE L T Y ++ + E PEY+ + L +E +R+ HYL SS++ L
Sbjct: 288 YTSSFEEKFLDATNQLYKAESQRKMQELEVPEYLQHVNKRLAEENERLRHYLDSSTKHPL 347
Query: 67 VEKVQHELLVVYATELLEKEQSGCRALLREDKVEDLSRMYRLYHKIPKGLEPVANVFKQH 126
+ V+ ELL + T +L+K G +LL ++++ DL+ +Y L ++ G + F
Sbjct: 348 IYNVEKELLAEHLTSILQK---GLDSLLEDNRLSDLTLLYGLLSRVKNGTSELCGNFNGF 404
Query: 127 ITAEGTVLVQQAEDAATNQGGSSGAVQEQVLIRKIIELHDKYMEYVTNCFINHTLFHKAL 186
I +G +V E +++ +++ +++ DK V CF ++ F +L
Sbjct: 405 IKKKGRTIVIDPE-------------KDKSMVQDLLDFKDKMDVIVRTCFEHNEKFTNSL 451
Query: 187 KEAFEIFCNK 196
+EAFE F N+
Sbjct: 452 REAFEFFINQ 461
>UNIPROTKB|F1SR61 [details] [associations]
symbol:LOC100511787 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0031461 "cullin-RING ubiquitin ligase complex"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
GO:GO:0005634 GO:GO:0005794 GO:GO:0016055 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0040016 GO:GO:0007229 GO:GO:0006511
SUPFAM:SSF75632 GO:GO:0031461 GO:GO:0007369 InterPro:IPR016159
SUPFAM:SSF74788 GeneTree:ENSGT00550000074299 OMA:ATFYGPI
GO:GO:0017145 GO:GO:0001831 EMBL:AEMK01142839 EMBL:CU640472
EMBL:CU915646 Ensembl:ENSSSCT00000017677 Uniprot:F1SR61
Length = 550
Score = 534 (193.0 bits), Expect = 4.0e-85, Sum P(2) = 4.0e-85
Identities = 115/358 (32%), Positives = 203/358 (56%)
Query: 26 KASNWILEDSCPEYMIKAEECLKKERDRVSHYLHSSSEPKLVEKVQHELLVVYATELLEK 85
++ ++ E+S Y+ K E + +E +RV H L S+E +V+ V+ EL+ + ++E
Sbjct: 2 ESQKFLAENSASVYIKKVEARINEEIERVMHCLDKSTEEPIVKVVERELISKHMKTIVEM 61
Query: 86 EQSGCRALLREDKVEDLSRMYRLYHKIPKGLEPVANVFKQHITAEGTVLVQQAEDAATNQ 145
E SG +L+ K EDL+ MY+L+ ++P GL+ + ++ +G LV + +
Sbjct: 62 ENSGLVHMLKNGKTEDLACMYKLFSRVPNGLKTMCECMSSYLREQGKALVSE-------E 114
Query: 146 GGSSGAVQEQVLIRKIIELHDKYMEYVTNCFINHTLFHKALKEAFEIFCNKAVGGSSSSE 205
G V I+ +++L ++ ++ F N LF + + FE F N S S E
Sbjct: 115 GEGKNPVD---YIQGLLDLKSRFDRFLQESFNNDRLFKQTIAGDFEYFLNL---NSRSPE 168
Query: 206 LLATFCDNILKKGGNEKLSDEAIEETLEKVVKLLAYISDKDLFAEFYRKKLARRLLFDRS 265
L+ F D+ LKKG + L+++ +E L+K + L ++ +KD+F +Y++ LARRLL ++S
Sbjct: 169 YLSLFIDDKLKKGV-KGLTEQEVETILDKAMVLFRFMQEKDVFERYYKQHLARRLLTNKS 227
Query: 266 ANDDHERSILTKLKQQCGGQFTSKMEGMVTDLTLARENQTSFEEYLSNNQNAHPGIDLSV 325
+DD E+++++KLK +CG QFTSK+EGM D++++ F ++L + G+DL+V
Sbjct: 228 VSDDSEKNMISKLKTECGCQFTSKLEGMFRDMSISNTTMDEFRQHLQATGVSLGGVDLTV 287
Query: 326 TVLTTGFWPSYKSSD-LNLPSEMVKCVEVFKGFYETKTKHRKLTWIYSLGQCNINGKF 382
VLTTG+WP+ ++ N+P E+F+ FY K R+LT + +G ++N F
Sbjct: 288 RVLTTGYWPTQSATPKCNIPPAPRHAFEIFRRFYLAKHSGRQLTLQHHMGSADLNATF 345
Score = 337 (123.7 bits), Expect = 4.0e-85, Sum P(2) = 4.0e-85
Identities = 76/193 (39%), Positives = 113/193 (58%)
Query: 373 LGQCNINGKFEQKNIELIVSTYQAATLLLFNTSDRLSYSEIMTQLNLTHDDLVRLLHSLS 432
+G + G +K+I L VST+Q L+LFN ++ ++ EI + ++ +LVR L SL+
Sbjct: 359 VGGAQVTGSNTRKHI-LQVSTFQMTILMLFNNREKYTFEEIQQETDIPERELVRALQSLA 417
Query: 433 CAK--YKILLKEPNTKTISQSDHFEFNSKFTDRMRRIKIPLPPVD------ERKKIVEDV 484
C K ++L KEP +K I F N +FT ++ R+KI ERK+ + V
Sbjct: 418 CGKPTQRVLTKEPKSKEIKNGHIFTVNDQFTSKLHRVKIQTVAAKQGESDPERKETRQKV 477
Query: 485 DKDRRYAIDAALVRIMKSRKVLGHQQLVSECVEQLSRMFKPDIKAIKKRMEDLITRDYLE 544
D DR++ I+AA+VRIMKSRK + H LV+E +QL F P IKKR+E LI R+YL
Sbjct: 478 DDDRKHEIEAAIVRIMKSRKKMQHNVLVAEVTQQLKARFLPSPVVIKKRIEGLIEREYLA 537
Query: 545 RDKENPNMFRYLA 557
R E+ ++ Y+A
Sbjct: 538 RTPEDRKVYTYVA 550
>ZFIN|ZDB-GENE-041008-208 [details] [associations]
symbol:cul4b "cullin 4B" species:7955 "Danio rerio"
[GO:0031461 "cullin-RING ubiquitin ligase complex" evidence=IEA]
[GO:0031625 "ubiquitin protein ligase binding" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
ZFIN:ZDB-GENE-041008-208 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0006511 SUPFAM:SSF75632 GO:GO:0031461 InterPro:IPR016159
SUPFAM:SSF74788 GeneTree:ENSGT00550000074299 EMBL:BX004980
IPI:IPI00637421 Ensembl:ENSDART00000085295 ArrayExpress:F1R029
Bgee:F1R029 Uniprot:F1R029
Length = 885
Score = 848 (303.6 bits), Expect = 1.0e-84, P = 1.0e-84
Identities = 199/563 (35%), Positives = 320/563 (56%)
Query: 15 MLQDTGAYYSRKASNWILEDSCPEYMIKAEECLKKERDRVSHYLHSSSE------PKLV- 67
ML D Y + LE++ Y + + L +ER+ V YLH ++ +++
Sbjct: 345 MLSDLQIYQDSFEQRF-LEETNRLYAAEGQR-LMQERE-VPEYLHHVNKRLEEEADRVIT 401
Query: 68 ---EKVQHELLVVYATELLEKE-----QSGCRALLREDKVEDLSRMYRLYHKIPKGLEPV 119
+ Q L+ +LL + Q G LL E++++DLS +Y+L+ ++ G++ +
Sbjct: 402 YLDQSTQKSLIATVEKQLLGEHLTAILQKGLNNLLDENRIQDLSLLYQLFSRVRGGVQVL 461
Query: 120 ANVFKQHITAEGTVLVQQAEDAATNQGGSSGAVQEQVLIRKIIELHDKYMEYVTNCFINH 179
+ ++I A G+ +V E +++ +++++++ DK + CF+ +
Sbjct: 462 LQHWIEYIKAFGSTIVINPE-------------KDKTMVQELLDFKDKVDHIIDVCFMKN 508
Query: 180 TLFHKALKEAFEIFCNKAVGGSSSSELLATFCDNILKKGGNEKLSDEAIEETLEKVVKLL 239
F +KEAFE F NK + +EL+A + D+ L+ GN++ +DE +E+ L+K++ +
Sbjct: 509 EKFVNGMKEAFETFINKRP--NKPAELIAKYVDSKLR-AGNKEATDEELEKMLDKIMIIF 565
Query: 240 AYISD-KDLFAEFYRKKLARRLLFDRSANDDHERSILTKLKQQCGGQFTSKMEGMVTDLT 298
+I + KD+F FY+K LA+RLL +SA+ D E+S+L+KLK +CG FTSK+EGM D+
Sbjct: 566 RFIYEGKDVFEAFYKKDLAKRLLVGKSASVDAEKSMLSKLKHECGAAFTSKLEGMFKDME 625
Query: 299 LARENQTSFEEYLSNNQNAHPGIDLSVTVLTTGFWPSYKSSDLNLPSEMVKCVEVFKGFY 358
L+++ F++++ QN I+L+V +LT G+WP+Y +++LP+EMV+ E+FK FY
Sbjct: 626 LSKDIMVQFKQHMQC-QNIPGNIELTVNILTMGYWPTYVPMEVHLPAEMVRLQEIFKTFY 684
Query: 359 ETKTKHRKLTWIYSLGQCNINGKFEQKNIELIVSTYQAATLLLFNTSDRLSYSEIMTQLN 418
K RKL W +LG C + +F++ EL VS +Q LL+FN + S +I
Sbjct: 685 LGKHSGRKLQWQSTLGHCVLKAEFKEGKKELQVSLFQTLVLLMFNEGEEFSLEDIKLATG 744
Query: 419 LTHDDLVRLLHSLSCAKYKILLKEPNTKTISQSDHFEFNSKFTDRMRRIKIPL----PPV 474
+ +L R L SL+C K ++L K P +K + D F N F ++ RIKI V
Sbjct: 745 IEDSELRRTLQSLACGKARVLTKIPKSKDVEDGDKFSCNDDFKHKLFRIKINQIQMKETV 804
Query: 475 DERKKIVEDVDKDRRYAIDAALVRIMKSRKVLGHQQLVSECVEQLSRMFKPDIKAIKKRM 534
+E+ E V +DR+Y IDAA+VRIMK RK L H LVSE QL KP +KKR+
Sbjct: 805 EEQASTTERVFQDRQYQIDAAIVRIMKMRKTLSHNLLVSEVYNQLKFPVKP--ADLKKRI 862
Query: 535 EDLITRDYLERDKENPNMFRYLA 557
E LI RDY+ERDKENPN + Y+A
Sbjct: 863 ESLIDRDYMERDKENPNQYNYVA 885
Score = 235 (87.8 bits), Expect = 3.7e-16, P = 3.7e-16
Identities = 53/196 (27%), Positives = 105/196 (53%)
Query: 1 MGQMDSYEKDFEEHMLQDTGAYYSRKASNWILEDSCPEYMIKAEECLKKERDRVSHYLHS 60
+ + Y+ FE+ L++T Y+ + + E PEY+ + L++E DRV YL
Sbjct: 346 LSDLQIYQDSFEQRFLEETNRLYAAEGQRLMQEREVPEYLHHVNKRLEEEADRVITYLDQ 405
Query: 61 SSEPKLVEKVQHELLVVYATELLEKEQSGCRALLREDKVEDLSRMYRLYHKIPKGLEPVA 120
S++ L+ V+ +LL + T +L+K G LL E++++DLS +Y+L+ ++ G++ +
Sbjct: 406 STQKSLIATVEKQLLGEHLTAILQK---GLNNLLDENRIQDLSLLYQLFSRVRGGVQVLL 462
Query: 121 NVFKQHITAEGTVLVQQAEDAATNQGGSSGAVQEQVLIRKIIELHDKYMEYVTNCFINHT 180
+ ++I A G+ +V E +++ +++++++ DK + CF+ +
Sbjct: 463 QHWIEYIKAFGSTIVINPE-------------KDKTMVQELLDFKDKVDHIIDVCFMKNE 509
Query: 181 LFHKALKEAFEIFCNK 196
F +KEAFE F NK
Sbjct: 510 KFVNGMKEAFETFINK 525
>UNIPROTKB|F1P2U1 [details] [associations]
symbol:CUL4A "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0031464 "Cul4A-RING ubiquitin ligase complex"
evidence=IEA] [GO:0045750 "positive regulation of S phase of
mitotic cell cycle" evidence=IEA] [GO:0051246 "regulation of
protein metabolic process" evidence=IEA] InterPro:IPR001373
InterPro:IPR016157 InterPro:IPR016158 InterPro:IPR019559
Pfam:PF00888 Pfam:PF10557 PROSITE:PS01256 PROSITE:PS50069
SMART:SM00182 SMART:SM00884 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0006511 SUPFAM:SSF75632 GO:GO:0045750 InterPro:IPR016159
SUPFAM:SSF74788 GeneTree:ENSGT00550000074299 GO:GO:0031464
OMA:KVSATLY GO:GO:0051246 EMBL:AADN02017929 EMBL:AADN02017930
EMBL:AADN02017931 IPI:IPI00587191 Ensembl:ENSGALT00000027171
Uniprot:F1P2U1
Length = 741
Score = 835 (299.0 bits), Expect = 2.4e-83, P = 2.4e-83
Identities = 199/555 (35%), Positives = 310/555 (55%)
Query: 15 MLQDTGAYYSRKASNWILEDSCPEYMIKAEECLKKERDRVSHYLHSSSEPKLVEKVQHEL 74
ML D Y ++ E +C Y + + L +ER+ V YLH S+ +L E + +
Sbjct: 202 MLSDLQVYKESFEQRFLEETNCL-YAAEGQR-LMQERE-VPEYLHHVSK-RLEE--EGDR 255
Query: 75 LVVYATELLEKEQSGC--RALLREDKVEDLSRMYRLYHKIPKG-LEPVANVFKQHITAEG 131
++ Y +K C + LL E L + L + + + + + ++ +G
Sbjct: 256 VITYLDHSTQKPLIACVEKQLLGEHLTAILQK--GLDNLLDENRISDLTQTYQLFSRVKG 313
Query: 132 --TVLVQQAEDAATNQGGSS--GAVQEQVLIRKIIELHDKYMEYVTNCFINHTLFHKALK 187
+L+Q + N G + +++ +++++++ DK + CF + F +K
Sbjct: 314 GQQILLQHWSEYIKNFGTTIVVNPEKDKDMVQELLDFKDKVDHIIEVCFQKNEKFINLMK 373
Query: 188 EAFEIFCNKAVGGSSSSELLATFCDNILKKGGNEKLSDEAIEETLEKVVKLLAYISDKDL 247
E+FE F NK + +EL+A + D+ L+ GN++ +DE +E L+K++ + +I KD+
Sbjct: 374 ESFETFINKRP--NKPAELIAKYVDSKLR-AGNKEATDEELERILDKIMIIFRFIHGKDV 430
Query: 248 FAEFYRKKLARRLLFDRSANDDHERSILTKLKQQCGGQFTSKMEGMVTDLTLARENQTSF 307
F FY+K LA+RLL +SA+ D E+S+L+KLK +CG FTSK+EGM D+ L+++ F
Sbjct: 431 FEAFYKKDLAKRLLVGKSASVDAEKSMLSKLKHECGAAFTSKLEGMFKDMELSKDVMVQF 490
Query: 308 EEYLSNNQNAHPG-IDLSVTVLTTGFWPSYKSSDLNLPSEMVKCVEVFKGFYETKTKHRK 366
++Y+ N + PG IDL+V +LT G+WP+Y +++L SEM+K EVFK FY K RK
Sbjct: 491 KQYMQNQSD--PGNIDLTVNILTMGYWPTYTPMEVHLNSEMIKLQEVFKTFYLGKHSGRK 548
Query: 367 LTWIYSLGQCNINGKFEQKNIELIVSTYQAATLLLFNTSDRLSYSEIMTQLNLTHDDLVR 426
L W +LG + +F++ E VS +Q LL+FN D S+ EI + +L R
Sbjct: 549 LQWQTTLGHAVLKAEFKEGKKEFQVSLFQTLVLLMFNEGDEFSFEEIKMATGIEDSELRR 608
Query: 427 LLHSLSCAKYKILLKEPNTKTISQSDHFEFNSKFTDRMRRIKIPL----PPVDERKKIVE 482
L SL+C K ++L+K P K + D F FN F ++ RIKI V+E+ E
Sbjct: 609 TLQSLACGKARVLIKNPKGKDVEDGDKFIFNGDFKHKLFRIKINQIQMKETVEEQVSTTE 668
Query: 483 DVDKDRRYAIDAALVRIMKSRKVLGHQQLVSECVEQLSRMFKPDIKAIKKRMEDLITRDY 542
V +DR+Y IDAA+VRIMK RK LGH LVSE QL KP +KKR+E LI RDY
Sbjct: 669 RVFQDRQYQIDAAIVRIMKMRKTLGHNLLVSELYNQLKFPVKPG--DLKKRIESLIDRDY 726
Query: 543 LERDKENPNMFRYLA 557
+ERDK+NPN + Y+A
Sbjct: 727 MERDKDNPNQYHYVA 741
Score = 213 (80.0 bits), Expect = 7.2e-14, P = 7.2e-14
Identities = 51/196 (26%), Positives = 102/196 (52%)
Query: 1 MGQMDSYEKDFEEHMLQDTGAYYSRKASNWILEDSCPEYMIKAEECLKKERDRVSHYLHS 60
+ + Y++ FE+ L++T Y+ + + E PEY+ + L++E DRV YL
Sbjct: 203 LSDLQVYKESFEQRFLEETNCLYAAEGQRLMQEREVPEYLHHVSKRLEEEGDRVITYLDH 262
Query: 61 SSEPKLVEKVQHELLVVYATELLEKEQSGCRALLREDKVEDLSRMYRLYHKIPKGLEPVA 120
S++ L+ V+ +LL + T +L+K G LL E+++ DL++ Y+L+ ++ G + +
Sbjct: 263 STQKPLIACVEKQLLGEHLTAILQK---GLDNLLDENRISDLTQTYQLFSRVKGGQQILL 319
Query: 121 NVFKQHITAEGTVLVQQAEDAATNQGGSSGAVQEQVLIRKIIELHDKYMEYVTNCFINHT 180
+ ++I GT +V E +++ +++++++ DK + CF +
Sbjct: 320 QHWSEYIKNFGTTIVVNPE-------------KDKDMVQELLDFKDKVDHIIEVCFQKNE 366
Query: 181 LFHKALKEAFEIFCNK 196
F +KE+FE F NK
Sbjct: 367 KFINLMKESFETFINK 382
>UNIPROTKB|E1BFD5 [details] [associations]
symbol:CUL4B "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0045750 "positive regulation of S phase of mitotic cell
cycle" evidence=IEA] [GO:0045732 "positive regulation of protein
catabolic process" evidence=IEA] [GO:0031465 "Cul4B-RING ubiquitin
ligase complex" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0031625
"ubiquitin protein ligase binding" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
InterPro:IPR001373 InterPro:IPR016157 InterPro:IPR016158
InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557 PROSITE:PS01256
PROSITE:PS50069 SMART:SM00182 SMART:SM00884 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0006511 GO:GO:0045732 SUPFAM:SSF75632
GO:GO:0045750 InterPro:IPR016159 SUPFAM:SSF74788
GeneTree:ENSGT00550000074299 OMA:FEDSLDF GO:GO:0031465
EMBL:DAAA02067221 EMBL:DAAA02067222 IPI:IPI00707913
Ensembl:ENSBTAT00000024713 Uniprot:E1BFD5
Length = 965
Score = 834 (298.6 bits), Expect = 3.1e-83, P = 3.1e-83
Identities = 201/554 (36%), Positives = 312/554 (56%)
Query: 15 MLQDTGAYYSRKASNWILEDSCPEYMIKAEECLKKERDRVSHYLHSSSEPKLVEKVQHEL 74
ML D Y + LE++ Y + ++ L +ER+ V YLH ++ +L E+
Sbjct: 426 MLSDLQIYQDSFEQRF-LEETNRLYAAEGQK-LMQERE-VPEYLHHVNK-RLEEEADR-- 479
Query: 75 LVVYATELLEKEQSGC--RALLREDKVEDLSRMYRLYHKIPKG-LEPVANVFKQHITAEG 131
L+ Y + +K + LL E L + L + + + ++ ++ +++ G
Sbjct: 480 LITYLDQTTQKSLIATVEKQLLGEHLTAILQK--GLNNLLDENRIQDLSLLYQLFSRVRG 537
Query: 132 --TVLVQQAEDAATNQGGSS--GAVQEQVLIRKIIELHDKYMEYVTNCFINHTLFHKALK 187
VL+QQ + G + +++ +++++++ DK + CF+ + F A+K
Sbjct: 538 GVQVLLQQWIEYIKAFGSTIVINPEKDKTMVQELLDFKDKVDHIIDICFLKNEKFINAMK 597
Query: 188 EAFEIFCNKAVGGSSSSELLATFCDNILKKGGNEKLSDEAIEETLEKVVKLLAYISDKDL 247
EAFE F NK + +EL+A + D+ L+ GN++ +DE +E+ L+K++ + +I KD+
Sbjct: 598 EAFETFINKRP--NKPAELIAKYVDSKLR-AGNKEATDEELEKMLDKIMIIFRFIYGKDV 654
Query: 248 FAEFYRKKLARRLLFDRSANDDHERSILTKLKQQCGGQFTSKMEGMVTDLTLARENQTSF 307
F FY+K LA+RLL +SA+ D E+S+L+KLK +CG FTSK+EGM D+ L+++ F
Sbjct: 655 FEAFYKKDLAKRLLVGKSASVDAEKSMLSKLKHECGAAFTSKLEGMFKDMELSKDIMIQF 714
Query: 308 EEYLSNNQNAHPGIDLSVTVLTTGFWPSYKSSDLNLPSEMVKCVEVFKGFYETKTKHRKL 367
++Y+ N QN I+L+V +LT G+WP+Y +++LP EMVK E+FK FY K RKL
Sbjct: 715 KQYMQN-QNVPGNIELTVNILTMGYWPTYVPMEVHLPPEMVKLQEIFKTFYLGKHSGRKL 773
Query: 368 TWIYSLGQCNINGKFEQKNIELIVSTYQAATLLLFNTSDRLSYSEIMTQLNLTHDDLVRL 427
W +LG C + +F++ EL VS +Q LL+FN + S EI + +L R
Sbjct: 774 QWQSTLGHCVLKAEFKEGKKELQVSLFQTLVLLMFNEGEEFSLEEIKQATGIEDGELRRT 833
Query: 428 LHSLSCAKYKILLKEPNTKTISQSDHFEFNSKFTDRMRRIKIPL----PPVDERKKIVED 483
L SL+C K ++L K P K I D F N F ++ RIKI V+E+ E
Sbjct: 834 LQSLACGKARVLAKNPKGKDIEDGDKFICNDDFKHKLFRIKINQIQMKETVEEQASTTER 893
Query: 484 VDKDRRYAIDAALVRIMKSRKVLGHQQLVSECVEQLSRMFKPDIKAIKKRMEDLITRDYL 543
V +DR+Y IDAA+VRIMK RK L H LVSE QL KP +KKR+E LI RDY+
Sbjct: 894 VFQDRQYQIDAAIVRIMKMRKTLSHNLLVSEVYNQLKFPVKP--ADLKKRIESLIDRDYM 951
Query: 544 ERDKENPNMFRYLA 557
ERDKENPN + Y+A
Sbjct: 952 ERDKENPNQYNYIA 965
Score = 235 (87.8 bits), Expect = 4.3e-16, P = 4.3e-16
Identities = 52/196 (26%), Positives = 106/196 (54%)
Query: 1 MGQMDSYEKDFEEHMLQDTGAYYSRKASNWILEDSCPEYMIKAEECLKKERDRVSHYLHS 60
+ + Y+ FE+ L++T Y+ + + E PEY+ + L++E DR+ YL
Sbjct: 427 LSDLQIYQDSFEQRFLEETNRLYAAEGQKLMQEREVPEYLHHVNKRLEEEADRLITYLDQ 486
Query: 61 SSEPKLVEKVQHELLVVYATELLEKEQSGCRALLREDKVEDLSRMYRLYHKIPKGLEPVA 120
+++ L+ V+ +LL + T +L+K G LL E++++DLS +Y+L+ ++ G++ +
Sbjct: 487 TTQKSLIATVEKQLLGEHLTAILQK---GLNNLLDENRIQDLSLLYQLFSRVRGGVQVLL 543
Query: 121 NVFKQHITAEGTVLVQQAEDAATNQGGSSGAVQEQVLIRKIIELHDKYMEYVTNCFINHT 180
+ ++I A G+ +V E +++ +++++++ DK + CF+ +
Sbjct: 544 QQWIEYIKAFGSTIVINPE-------------KDKTMVQELLDFKDKVDHIIDICFLKNE 590
Query: 181 LFHKALKEAFEIFCNK 196
F A+KEAFE F NK
Sbjct: 591 KFINAMKEAFETFINK 606
>UNIPROTKB|E2RMN1 [details] [associations]
symbol:CUL4B "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0031461 "cullin-RING ubiquitin ligase complex"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006511 SUPFAM:SSF75632
GO:GO:0031461 InterPro:IPR016159 SUPFAM:SSF74788
GeneTree:ENSGT00550000074299 OMA:FEDSLDF EMBL:AAEX03026836
Ensembl:ENSCAFT00000029435 Uniprot:E2RMN1
Length = 982
Score = 834 (298.6 bits), Expect = 3.1e-83, P = 3.1e-83
Identities = 201/554 (36%), Positives = 312/554 (56%)
Query: 15 MLQDTGAYYSRKASNWILEDSCPEYMIKAEECLKKERDRVSHYLHSSSEPKLVEKVQHEL 74
ML D Y + LE++ Y + ++ L +ER+ V YLH ++ +L E+
Sbjct: 443 MLSDLQIYQDSFEQRF-LEETNRLYAAEGQK-LMQERE-VPEYLHHVNK-RLEEEADR-- 496
Query: 75 LVVYATELLEKEQSGC--RALLREDKVEDLSRMYRLYHKIPKG-LEPVANVFKQHITAEG 131
L+ Y + +K + LL E L + L + + + ++ ++ +++ G
Sbjct: 497 LITYLDQTTQKSLIATVEKQLLGEHLTAILQK--GLNNLLDENRIQDLSLLYQLFSRVRG 554
Query: 132 --TVLVQQAEDAATNQGGSS--GAVQEQVLIRKIIELHDKYMEYVTNCFINHTLFHKALK 187
VL+QQ + G + +++ +++++++ DK + CF+ + F A+K
Sbjct: 555 GVQVLLQQWIEYIKAFGSTIVINPEKDKTMVQELLDFKDKVDHIIDICFLKNEKFINAMK 614
Query: 188 EAFEIFCNKAVGGSSSSELLATFCDNILKKGGNEKLSDEAIEETLEKVVKLLAYISDKDL 247
EAFE F NK + +EL+A + D+ L+ GN++ +DE +E+ L+K++ + +I KD+
Sbjct: 615 EAFETFINKRP--NKPAELIAKYVDSKLR-AGNKEATDEELEKMLDKIMIIFRFIYGKDV 671
Query: 248 FAEFYRKKLARRLLFDRSANDDHERSILTKLKQQCGGQFTSKMEGMVTDLTLARENQTSF 307
F FY+K LA+RLL +SA+ D E+S+L+KLK +CG FTSK+EGM D+ L+++ F
Sbjct: 672 FEAFYKKDLAKRLLVGKSASVDAEKSMLSKLKHECGAAFTSKLEGMFKDMELSKDIMIQF 731
Query: 308 EEYLSNNQNAHPGIDLSVTVLTTGFWPSYKSSDLNLPSEMVKCVEVFKGFYETKTKHRKL 367
++Y+ N QN I+L+V +LT G+WP+Y +++LP EMVK E+FK FY K RKL
Sbjct: 732 KQYMQN-QNVPGNIELTVNILTMGYWPTYVPMEVHLPPEMVKLQEIFKTFYLGKHSGRKL 790
Query: 368 TWIYSLGQCNINGKFEQKNIELIVSTYQAATLLLFNTSDRLSYSEIMTQLNLTHDDLVRL 427
W +LG C + +F++ EL VS +Q LL+FN + S EI + +L R
Sbjct: 791 QWQSTLGHCVLKAEFKEGKKELQVSLFQTLVLLMFNEGEEFSLEEIKQATGIEDGELRRT 850
Query: 428 LHSLSCAKYKILLKEPNTKTISQSDHFEFNSKFTDRMRRIKIPL----PPVDERKKIVED 483
L SL+C K ++L K P K I D F N F ++ RIKI V+E+ E
Sbjct: 851 LQSLACGKARVLAKNPKGKDIEDGDKFICNDDFKHKLFRIKINQIQMKETVEEQASTTER 910
Query: 484 VDKDRRYAIDAALVRIMKSRKVLGHQQLVSECVEQLSRMFKPDIKAIKKRMEDLITRDYL 543
V +DR+Y IDAA+VRIMK RK L H LVSE QL KP +KKR+E LI RDY+
Sbjct: 911 VFQDRQYQIDAAIVRIMKMRKTLSHNLLVSEVYNQLKFPVKP--ADLKKRIESLIDRDYM 968
Query: 544 ERDKENPNMFRYLA 557
ERDKENPN + Y+A
Sbjct: 969 ERDKENPNQYNYIA 982
Score = 235 (87.8 bits), Expect = 4.4e-16, P = 4.4e-16
Identities = 52/196 (26%), Positives = 106/196 (54%)
Query: 1 MGQMDSYEKDFEEHMLQDTGAYYSRKASNWILEDSCPEYMIKAEECLKKERDRVSHYLHS 60
+ + Y+ FE+ L++T Y+ + + E PEY+ + L++E DR+ YL
Sbjct: 444 LSDLQIYQDSFEQRFLEETNRLYAAEGQKLMQEREVPEYLHHVNKRLEEEADRLITYLDQ 503
Query: 61 SSEPKLVEKVQHELLVVYATELLEKEQSGCRALLREDKVEDLSRMYRLYHKIPKGLEPVA 120
+++ L+ V+ +LL + T +L+K G LL E++++DLS +Y+L+ ++ G++ +
Sbjct: 504 TTQKSLIATVEKQLLGEHLTAILQK---GLNNLLDENRIQDLSLLYQLFSRVRGGVQVLL 560
Query: 121 NVFKQHITAEGTVLVQQAEDAATNQGGSSGAVQEQVLIRKIIELHDKYMEYVTNCFINHT 180
+ ++I A G+ +V E +++ +++++++ DK + CF+ +
Sbjct: 561 QQWIEYIKAFGSTIVINPE-------------KDKTMVQELLDFKDKVDHIIDICFLKNE 607
Query: 181 LFHKALKEAFEIFCNK 196
F A+KEAFE F NK
Sbjct: 608 KFINAMKEAFETFINK 623
>UNIPROTKB|K4DI93 [details] [associations]
symbol:CUL4B "Cullin 4B, isoform CRA_e" species:9606 "Homo
sapiens" [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0031461 "cullin-RING ubiquitin ligase
complex" evidence=IEA] [GO:0031625 "ubiquitin protein ligase
binding" evidence=IEA] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006511 EMBL:CH471107
SUPFAM:SSF75632 GO:GO:0031461 InterPro:IPR016159 SUPFAM:SSF74788
EMBL:AC002476 EMBL:AL451005 HGNC:HGNC:2555 Ensembl:ENST00000336592
Uniprot:K4DI93
Length = 900
Score = 834 (298.6 bits), Expect = 3.1e-83, P = 3.1e-83
Identities = 201/554 (36%), Positives = 312/554 (56%)
Query: 15 MLQDTGAYYSRKASNWILEDSCPEYMIKAEECLKKERDRVSHYLHSSSEPKLVEKVQHEL 74
ML D Y + LE++ Y + ++ L +ER+ V YLH ++ +L E+
Sbjct: 361 MLSDLQIYQDSFEQRF-LEETNRLYAAEGQK-LMQERE-VPEYLHHVNK-RLEEEADR-- 414
Query: 75 LVVYATELLEKEQSGC--RALLREDKVEDLSRMYRLYHKIPKG-LEPVANVFKQHITAEG 131
L+ Y + +K + LL E L + L + + + ++ ++ +++ G
Sbjct: 415 LITYLDQTTQKSLIATVEKQLLGEHLTAILQK--GLNNLLDENRIQDLSLLYQLFSRVRG 472
Query: 132 --TVLVQQAEDAATNQGGSS--GAVQEQVLIRKIIELHDKYMEYVTNCFINHTLFHKALK 187
VL+QQ + G + +++ +++++++ DK + CF+ + F A+K
Sbjct: 473 GVQVLLQQWIEYIKAFGSTIVINPEKDKTMVQELLDFKDKVDHIIDICFLKNEKFINAMK 532
Query: 188 EAFEIFCNKAVGGSSSSELLATFCDNILKKGGNEKLSDEAIEETLEKVVKLLAYISDKDL 247
EAFE F NK + +EL+A + D+ L+ GN++ +DE +E+ L+K++ + +I KD+
Sbjct: 533 EAFETFINKRP--NKPAELIAKYVDSKLR-AGNKEATDEELEKMLDKIMIIFRFIYGKDV 589
Query: 248 FAEFYRKKLARRLLFDRSANDDHERSILTKLKQQCGGQFTSKMEGMVTDLTLARENQTSF 307
F FY+K LA+RLL +SA+ D E+S+L+KLK +CG FTSK+EGM D+ L+++ F
Sbjct: 590 FEAFYKKDLAKRLLVGKSASVDAEKSMLSKLKHECGAAFTSKLEGMFKDMELSKDIMIQF 649
Query: 308 EEYLSNNQNAHPGIDLSVTVLTTGFWPSYKSSDLNLPSEMVKCVEVFKGFYETKTKHRKL 367
++Y+ N QN I+L+V +LT G+WP+Y +++LP EMVK E+FK FY K RKL
Sbjct: 650 KQYMQN-QNVPGNIELTVNILTMGYWPTYVPMEVHLPPEMVKLQEIFKTFYLGKHSGRKL 708
Query: 368 TWIYSLGQCNINGKFEQKNIELIVSTYQAATLLLFNTSDRLSYSEIMTQLNLTHDDLVRL 427
W +LG C + +F++ EL VS +Q LL+FN + S EI + +L R
Sbjct: 709 QWQSTLGHCVLKAEFKEGKKELQVSLFQTLVLLMFNEGEEFSLEEIKQATGIEDGELRRT 768
Query: 428 LHSLSCAKYKILLKEPNTKTISQSDHFEFNSKFTDRMRRIKIPL----PPVDERKKIVED 483
L SL+C K ++L K P K I D F N F ++ RIKI V+E+ E
Sbjct: 769 LQSLACGKARVLAKNPKGKDIEDGDKFICNDDFKHKLFRIKINQIQMKETVEEQASTTER 828
Query: 484 VDKDRRYAIDAALVRIMKSRKVLGHQQLVSECVEQLSRMFKPDIKAIKKRMEDLITRDYL 543
V +DR+Y IDAA+VRIMK RK L H LVSE QL KP +KKR+E LI RDY+
Sbjct: 829 VFQDRQYQIDAAIVRIMKMRKTLSHNLLVSEVYNQLKFPVKP--ADLKKRIESLIDRDYM 886
Query: 544 ERDKENPNMFRYLA 557
ERDKENPN + Y+A
Sbjct: 887 ERDKENPNQYNYIA 900
Score = 235 (87.8 bits), Expect = 3.8e-16, P = 3.8e-16
Identities = 52/196 (26%), Positives = 106/196 (54%)
Query: 1 MGQMDSYEKDFEEHMLQDTGAYYSRKASNWILEDSCPEYMIKAEECLKKERDRVSHYLHS 60
+ + Y+ FE+ L++T Y+ + + E PEY+ + L++E DR+ YL
Sbjct: 362 LSDLQIYQDSFEQRFLEETNRLYAAEGQKLMQEREVPEYLHHVNKRLEEEADRLITYLDQ 421
Query: 61 SSEPKLVEKVQHELLVVYATELLEKEQSGCRALLREDKVEDLSRMYRLYHKIPKGLEPVA 120
+++ L+ V+ +LL + T +L+K G LL E++++DLS +Y+L+ ++ G++ +
Sbjct: 422 TTQKSLIATVEKQLLGEHLTAILQK---GLNNLLDENRIQDLSLLYQLFSRVRGGVQVLL 478
Query: 121 NVFKQHITAEGTVLVQQAEDAATNQGGSSGAVQEQVLIRKIIELHDKYMEYVTNCFINHT 180
+ ++I A G+ +V E +++ +++++++ DK + CF+ +
Sbjct: 479 QQWIEYIKAFGSTIVINPE-------------KDKTMVQELLDFKDKVDHIIDICFLKNE 525
Query: 181 LFHKALKEAFEIFCNK 196
F A+KEAFE F NK
Sbjct: 526 KFINAMKEAFETFINK 541
>UNIPROTKB|Q13620 [details] [associations]
symbol:CUL4B "Cullin-4B" species:9606 "Homo sapiens"
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0045732
"positive regulation of protein catabolic process" evidence=IEA]
[GO:0045750 "positive regulation of S phase of mitotic cell cycle"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0016567 "protein ubiquitination" evidence=IEA] [GO:0007049
"cell cycle" evidence=NAS] [GO:0031465 "Cul4B-RING ubiquitin ligase
complex" evidence=IDA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0005886 "plasma membrane"
evidence=IDA] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
UniPathway:UPA00143 GO:GO:0005886 GO:GO:0005634 GO:GO:0006281
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0016567 GO:GO:0007049
GO:GO:0006511 EMBL:CH471107 GO:GO:0045732 eggNOG:COG5647
SUPFAM:SSF75632 GO:GO:0045750 InterPro:IPR016159 SUPFAM:SSF74788
PDB:4A0C PDBsum:4A0C KO:K10609 HOVERGEN:HBG003619 OrthoDB:EOG42FSH0
EMBL:AY365125 EMBL:AF212995 EMBL:AK123688 EMBL:AK299081
EMBL:AK315037 EMBL:BX537787 EMBL:AC002476 EMBL:AL451005
EMBL:BC036216 EMBL:AB014595 EMBL:U58091 IPI:IPI00179057
IPI:IPI00480142 IPI:IPI00965290 RefSeq:NP_001073341.1
RefSeq:NP_003579.3 UniGene:Hs.102914 PDB:2DO7 PDB:4A0L PDB:4A64
PDBsum:2DO7 PDBsum:4A0L PDBsum:4A64 ProteinModelPortal:Q13620
SMR:Q13620 DIP:DIP-31609N IntAct:Q13620 STRING:Q13620
PhosphoSite:Q13620 DMDM:296439468 PaxDb:Q13620 PRIDE:Q13620
DNASU:8450 Ensembl:ENST00000371322 Ensembl:ENST00000404115
GeneID:8450 KEGG:hsa:8450 UCSC:uc004esv.3 UCSC:uc004esw.3 CTD:8450
GeneCards:GC0XM119658 H-InvDB:HIX0017025 HGNC:HGNC:2555
HPA:CAB017786 HPA:HPA011880 MIM:300304 MIM:300354
neXtProt:NX_Q13620 Orphanet:85293 PharmGKB:PA27051 OMA:FEDSLDF
EvolutionaryTrace:Q13620 GenomeRNAi:8450 NextBio:31618
PMAP-CutDB:Q13620 ArrayExpress:Q13620 Bgee:Q13620 CleanEx:HS_CUL4B
Genevestigator:Q13620 GermOnline:ENSG00000158290 GO:GO:0031465
Uniprot:Q13620
Length = 913
Score = 834 (298.6 bits), Expect = 3.1e-83, P = 3.1e-83
Identities = 201/554 (36%), Positives = 312/554 (56%)
Query: 15 MLQDTGAYYSRKASNWILEDSCPEYMIKAEECLKKERDRVSHYLHSSSEPKLVEKVQHEL 74
ML D Y + LE++ Y + ++ L +ER+ V YLH ++ +L E+
Sbjct: 374 MLSDLQIYQDSFEQRF-LEETNRLYAAEGQK-LMQERE-VPEYLHHVNK-RLEEEADR-- 427
Query: 75 LVVYATELLEKEQSGC--RALLREDKVEDLSRMYRLYHKIPKG-LEPVANVFKQHITAEG 131
L+ Y + +K + LL E L + L + + + ++ ++ +++ G
Sbjct: 428 LITYLDQTTQKSLIATVEKQLLGEHLTAILQK--GLNNLLDENRIQDLSLLYQLFSRVRG 485
Query: 132 --TVLVQQAEDAATNQGGSS--GAVQEQVLIRKIIELHDKYMEYVTNCFINHTLFHKALK 187
VL+QQ + G + +++ +++++++ DK + CF+ + F A+K
Sbjct: 486 GVQVLLQQWIEYIKAFGSTIVINPEKDKTMVQELLDFKDKVDHIIDICFLKNEKFINAMK 545
Query: 188 EAFEIFCNKAVGGSSSSELLATFCDNILKKGGNEKLSDEAIEETLEKVVKLLAYISDKDL 247
EAFE F NK + +EL+A + D+ L+ GN++ +DE +E+ L+K++ + +I KD+
Sbjct: 546 EAFETFINKRP--NKPAELIAKYVDSKLR-AGNKEATDEELEKMLDKIMIIFRFIYGKDV 602
Query: 248 FAEFYRKKLARRLLFDRSANDDHERSILTKLKQQCGGQFTSKMEGMVTDLTLARENQTSF 307
F FY+K LA+RLL +SA+ D E+S+L+KLK +CG FTSK+EGM D+ L+++ F
Sbjct: 603 FEAFYKKDLAKRLLVGKSASVDAEKSMLSKLKHECGAAFTSKLEGMFKDMELSKDIMIQF 662
Query: 308 EEYLSNNQNAHPGIDLSVTVLTTGFWPSYKSSDLNLPSEMVKCVEVFKGFYETKTKHRKL 367
++Y+ N QN I+L+V +LT G+WP+Y +++LP EMVK E+FK FY K RKL
Sbjct: 663 KQYMQN-QNVPGNIELTVNILTMGYWPTYVPMEVHLPPEMVKLQEIFKTFYLGKHSGRKL 721
Query: 368 TWIYSLGQCNINGKFEQKNIELIVSTYQAATLLLFNTSDRLSYSEIMTQLNLTHDDLVRL 427
W +LG C + +F++ EL VS +Q LL+FN + S EI + +L R
Sbjct: 722 QWQSTLGHCVLKAEFKEGKKELQVSLFQTLVLLMFNEGEEFSLEEIKQATGIEDGELRRT 781
Query: 428 LHSLSCAKYKILLKEPNTKTISQSDHFEFNSKFTDRMRRIKIPL----PPVDERKKIVED 483
L SL+C K ++L K P K I D F N F ++ RIKI V+E+ E
Sbjct: 782 LQSLACGKARVLAKNPKGKDIEDGDKFICNDDFKHKLFRIKINQIQMKETVEEQASTTER 841
Query: 484 VDKDRRYAIDAALVRIMKSRKVLGHQQLVSECVEQLSRMFKPDIKAIKKRMEDLITRDYL 543
V +DR+Y IDAA+VRIMK RK L H LVSE QL KP +KKR+E LI RDY+
Sbjct: 842 VFQDRQYQIDAAIVRIMKMRKTLSHNLLVSEVYNQLKFPVKP--ADLKKRIESLIDRDYM 899
Query: 544 ERDKENPNMFRYLA 557
ERDKENPN + Y+A
Sbjct: 900 ERDKENPNQYNYIA 913
Score = 235 (87.8 bits), Expect = 3.9e-16, P = 3.9e-16
Identities = 52/196 (26%), Positives = 106/196 (54%)
Query: 1 MGQMDSYEKDFEEHMLQDTGAYYSRKASNWILEDSCPEYMIKAEECLKKERDRVSHYLHS 60
+ + Y+ FE+ L++T Y+ + + E PEY+ + L++E DR+ YL
Sbjct: 375 LSDLQIYQDSFEQRFLEETNRLYAAEGQKLMQEREVPEYLHHVNKRLEEEADRLITYLDQ 434
Query: 61 SSEPKLVEKVQHELLVVYATELLEKEQSGCRALLREDKVEDLSRMYRLYHKIPKGLEPVA 120
+++ L+ V+ +LL + T +L+K G LL E++++DLS +Y+L+ ++ G++ +
Sbjct: 435 TTQKSLIATVEKQLLGEHLTAILQK---GLNNLLDENRIQDLSLLYQLFSRVRGGVQVLL 491
Query: 121 NVFKQHITAEGTVLVQQAEDAATNQGGSSGAVQEQVLIRKIIELHDKYMEYVTNCFINHT 180
+ ++I A G+ +V E +++ +++++++ DK + CF+ +
Sbjct: 492 QQWIEYIKAFGSTIVINPE-------------KDKTMVQELLDFKDKVDHIIDICFLKNE 538
Query: 181 LFHKALKEAFEIFCNK 196
F A+KEAFE F NK
Sbjct: 539 KFINAMKEAFETFINK 554
>MGI|MGI:1919834 [details] [associations]
symbol:Cul4b "cullin 4B" species:10090 "Mus musculus"
[GO:0005634 "nucleus" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0006974 "response to DNA damage
stimulus" evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA]
[GO:0031461 "cullin-RING ubiquitin ligase complex" evidence=IEA]
[GO:0031465 "Cul4B-RING ubiquitin ligase complex" evidence=ISO]
[GO:0031625 "ubiquitin protein ligase binding" evidence=IEA]
[GO:0045732 "positive regulation of protein catabolic process"
evidence=IMP] [GO:0045750 "positive regulation of S phase of
mitotic cell cycle" evidence=IMP] InterPro:IPR001373
InterPro:IPR016157 InterPro:IPR016158 InterPro:IPR019559
Pfam:PF00888 Pfam:PF10557 PROSITE:PS01256 PROSITE:PS50069
SMART:SM00182 SMART:SM00884 UniPathway:UPA00143 MGI:MGI:1919834
GO:GO:0005634 GO:GO:0006281 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0016567 GO:GO:0007049 GO:GO:0006511 GO:GO:0045732
eggNOG:COG5647 SUPFAM:SSF75632 GO:GO:0045750 EMBL:CH466570
InterPro:IPR016159 SUPFAM:SSF74788 GeneTree:ENSGT00550000074299
KO:K10609 HOVERGEN:HBG003619 OrthoDB:EOG42FSH0 CTD:8450
GO:GO:0031465 EMBL:AY330868 EMBL:AK012410 EMBL:AK032701
EMBL:AK160998 EMBL:AL513356 EMBL:BC004026 EMBL:BC010347
EMBL:AB093259 IPI:IPI00224689 IPI:IPI00473987 RefSeq:NP_001103612.1
RefSeq:NP_082564.3 UniGene:Mm.327675 ProteinModelPortal:A2A432
SMR:A2A432 IntAct:A2A432 STRING:A2A432 PhosphoSite:A2A432
PaxDb:A2A432 PRIDE:A2A432 Ensembl:ENSMUST00000050083
Ensembl:ENSMUST00000115118 GeneID:72584 KEGG:mmu:72584
UCSC:uc009taa.2 InParanoid:Q91YZ7 ChiTaRS:CUL4B NextBio:336543
Bgee:A2A432 Genevestigator:A2A432 Uniprot:A2A432
Length = 970
Score = 833 (298.3 bits), Expect = 3.9e-83, P = 3.9e-83
Identities = 202/553 (36%), Positives = 309/553 (55%)
Query: 15 MLQDTGAYYSRKASNWILEDSCPEYMIKAEECLKKERDRVSHYLHSSSEPKLVEKVQHEL 74
ML D Y + L+++ Y + ++ L +ER+ V YLH ++ +L E+
Sbjct: 431 MLSDLQIYQDSFEQQF-LQETNRLYAAEGQK-LMQERE-VPEYLHHVNK-RLEEEADR-- 484
Query: 75 LVVYATELLEKE--QSGCRALLREDKVEDLSRMYR--LYHKIPKGLEPVANVFKQHITAE 130
L+ Y + +K S + LL E L + L + L + +F + +
Sbjct: 485 LITYLDQTTQKSLIASVEKQLLGEHLTAILQKGLNSLLDENRIQDLSLLYQLFSR-VRGG 543
Query: 131 GTVLVQQAEDAATNQGGSS--GAVQEQVLIRKIIELHDKYMEYVTNCFINHTLFHKALKE 188
VL+QQ + G + +++ +++++++ DK + CF+ + F A+KE
Sbjct: 544 VQVLLQQWIEYIKAFGSTIVINPEKDKTMVQELLDFKDKVDHIIDTCFLKNEKFINAMKE 603
Query: 189 AFEIFCNKAVGGSSSSELLATFCDNILKKGGNEKLSDEAIEETLEKVVKLLAYISDKDLF 248
AFE F NK + +EL+A + D+ L+ GN++ +DE +E+ L+K++ + +I KD+F
Sbjct: 604 AFETFINKRP--NKPAELIAKYVDSKLR-AGNKEATDEELEKMLDKIMIIFRFIYGKDVF 660
Query: 249 AEFYRKKLARRLLFDRSANDDHERSILTKLKQQCGGQFTSKMEGMVTDLTLARENQTSFE 308
FY+K LA+RLL +SA+ D E+S+L+KLK +CG FTSK+EGM D+ L+++ F+
Sbjct: 661 EAFYKKDLAKRLLVGKSASVDAEKSMLSKLKHECGAAFTSKLEGMFKDMELSKDIMIQFK 720
Query: 309 EYLSNNQNAHPGIDLSVTVLTTGFWPSYKSSDLNLPSEMVKCVEVFKGFYETKTKHRKLT 368
+Y+ N QN I+L+V +LT G+WP+Y +++LP EMVK E+FK FY K RKL
Sbjct: 721 QYMQN-QNVPGNIELTVNILTMGYWPTYVPMEVHLPPEMVKLQEIFKTFYLGKHSGRKLQ 779
Query: 369 WIYSLGQCNINGKFEQKNIELIVSTYQAATLLLFNTSDRLSYSEIMTQLNLTHDDLVRLL 428
W +LG C + +F++ EL VS +Q LL+FN + S EI + +L R L
Sbjct: 780 WQSTLGHCVLKAEFKEGKKELQVSLFQTMVLLMFNEGEEFSLEEIKHATGIEDGELRRTL 839
Query: 429 HSLSCAKYKILLKEPNTKTISQSDHFEFNSKFTDRMRRIKIPL----PPVDERKKIVEDV 484
SL+C K ++L K P K I D F N F ++ RIKI V+E+ E V
Sbjct: 840 QSLACGKARVLAKNPKGKDIEDGDKFICNDDFKHKLFRIKINQIQMKETVEEQASTTERV 899
Query: 485 DKDRRYAIDAALVRIMKSRKVLGHQQLVSECVEQLSRMFKPDIKAIKKRMEDLITRDYLE 544
+DR+Y IDAA+VRIMK RK L H LVSE QL KP +KKR+E LI RDY+E
Sbjct: 900 FQDRQYQIDAAIVRIMKMRKTLSHNLLVSEVYNQLKFPVKP--ADLKKRIESLIDRDYME 957
Query: 545 RDKENPNMFRYLA 557
RDKENPN + Y+A
Sbjct: 958 RDKENPNQYNYIA 970
Score = 245 (91.3 bits), Expect = 3.4e-17, P = 3.4e-17
Identities = 53/196 (27%), Positives = 107/196 (54%)
Query: 1 MGQMDSYEKDFEEHMLQDTGAYYSRKASNWILEDSCPEYMIKAEECLKKERDRVSHYLHS 60
+ + Y+ FE+ LQ+T Y+ + + E PEY+ + L++E DR+ YL
Sbjct: 432 LSDLQIYQDSFEQQFLQETNRLYAAEGQKLMQEREVPEYLHHVNKRLEEEADRLITYLDQ 491
Query: 61 SSEPKLVEKVQHELLVVYATELLEKEQSGCRALLREDKVEDLSRMYRLYHKIPKGLEPVA 120
+++ L+ V+ +LL + T +L+K G +LL E++++DLS +Y+L+ ++ G++ +
Sbjct: 492 TTQKSLIASVEKQLLGEHLTAILQK---GLNSLLDENRIQDLSLLYQLFSRVRGGVQVLL 548
Query: 121 NVFKQHITAEGTVLVQQAEDAATNQGGSSGAVQEQVLIRKIIELHDKYMEYVTNCFINHT 180
+ ++I A G+ +V E +++ +++++++ DK + CF+ +
Sbjct: 549 QQWIEYIKAFGSTIVINPE-------------KDKTMVQELLDFKDKVDHIIDTCFLKNE 595
Query: 181 LFHKALKEAFEIFCNK 196
F A+KEAFE F NK
Sbjct: 596 KFINAMKEAFETFINK 611
>UNIPROTKB|G3N0Q3 [details] [associations]
symbol:G3N0Q3 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0031461 "cullin-RING ubiquitin ligase complex"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006511 SUPFAM:SSF75632
GO:GO:0031461 InterPro:IPR016159 SUPFAM:SSF74788
GeneTree:ENSGT00550000074299 OMA:NDYHERS EMBL:DAAA02010429
PRIDE:G3N0Q3 Ensembl:ENSBTAT00000063692 NextBio:20878225
Uniprot:G3N0Q3
Length = 767
Score = 833 (298.3 bits), Expect = 3.9e-83, P = 3.9e-83
Identities = 201/571 (35%), Positives = 317/571 (55%)
Query: 7 YEKDFEEHMLQDTGAYYSRKASNWILEDSCPEYMIKAEECLKKERDRVSHYLHSSSEPKL 66
Y++ FE L DT YY+RK++ + ++ EYM K E L +ER R YLH SS+ KL
Sbjct: 219 YKEAFESQFLADTERYYTRKSTELLQQNPVTEYMKKVEALLLEERRRARVYLHQSSKGKL 278
Query: 67 VEKVQHELLVVYATELLEKEQSGCRALLREDKVEDLSRMYRLYHKIPKGLEPVANVFKQH 126
K + L+ + L + Q+ LL +K EDL RMYRL ++I GL + + H
Sbjct: 279 ARKCRQVLVEKHLEIFLTEFQN----LLNANKSEDLGRMYRLIYRIKNGLGEFKKILETH 334
Query: 127 ITAEGTVLVQQAEDAATNQGGSSGAVQEQVLIRKIIELHDKYMEYVTNCFINHTLFHKAL 186
I +G +++ +AA N ++ + ++ +H KY V + F NH F AL
Sbjct: 335 IHNQGLSAIEECGEAALND--------PRMYVETVLNIHKKYNALVISAFRNHADFVAAL 386
Query: 187 KEAFEIFCNK------AVGGSSSSELLATFCDNILKKGGNEKLSDEA-IEETLEKVVKLL 239
+A F N A S S ELLA +CD++LKK + K +EA +E+TL V+ +
Sbjct: 387 DKACSGFINNNAVTKMAQSSSKSPELLAQYCDSLLKK--SSKNPEEAELEDTLNHVMTVF 444
Query: 240 AYISDKDLFAEFYRKKLARRLLFDRSANDDHERSILTKLKQQCGGQFTSKMEGMVTDLTL 299
Y+ DKD+ +FY K LA+RL+ SA+DD E S+++KLKQ CG ++TSK++ M D+ +
Sbjct: 445 KYMDDKDVVQKFYTKMLAKRLVHQNSASDDAEASMVSKLKQACGFEYTSKLQRMFQDIGV 504
Query: 300 ARENQTSFEEYLSNNQNAHPGIDLSVTVLTTGFWPSYKSSDLNLPSEMVKCVEVFKGFYE 359
++ F+++L +++ +D S+ VL+ G+WP +S + LPSE+ C F FY
Sbjct: 505 SKALNAQFKKHLMDSEPLD--LDFSIHVLSYGWWPFEESCTVLLPSELEPCYRRFTAFYA 562
Query: 360 TKTKHRKLTWIYSLGQCNINGKFEQKNIELIVSTYQAATLLLFNTSDRLSYSEIMTQLNL 419
+ RKL+W Y L + + + + N L VST+Q A LL +NT D + ++M +
Sbjct: 563 SCYSDRKLSWAYQLSEGELVTNYFKNNYTLRVSTFQMAILLQYNTEDAYTIQQLMDSTQI 622
Query: 420 THDDLVRLLHSLSCAKYKILLKEPNTKTISQSD---------HFEFNSKFTDRMRRIKIP 470
D + ++L L K+K+L+ E + + + + HF + SK R+ I
Sbjct: 623 KMDIVAQVLQIL--LKFKLLVLEDKSANVDEVELKPDTLIKLHFGYKSK----KLRVNIS 676
Query: 471 LPPVDERKK----IVEDVDKDRRYAIDAALVRIMKSRKVLGHQQLVSECVEQLSRMFKPD 526
LP E+K+ + +++++DR+ I AA+VRIMK RKV+ HQQL+ E QLS +FKP
Sbjct: 677 LPMKIEQKREQETMYKNIEEDRKLLIQAAIVRIMKMRKVVKHQQLLGEVATQLSSVFKPQ 736
Query: 527 IKAIKKRMEDLITRDYLERDKENPNMFRYLA 557
I IKK ++ LI ++YLER + + + YLA
Sbjct: 737 ISVIKKCIDILIEKEYLERVGDEKDTYSYLA 767
>UNIPROTKB|Q13619 [details] [associations]
symbol:CUL4A "Cullin-4A" species:9606 "Homo sapiens"
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0019048
"virus-host interaction" evidence=IEA] [GO:0045750 "positive
regulation of S phase of mitotic cell cycle" evidence=IEA]
[GO:0051246 "regulation of protein metabolic process" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0031464 "Cul4A-RING ubiquitin
ligase complex" evidence=IDA] [GO:0080008 "Cul4-RING ubiquitin
ligase complex" evidence=IDA] [GO:0000082 "G1/S transition of
mitotic cell cycle" evidence=TAS] [GO:0008285 "negative regulation
of cell proliferation" evidence=TAS] [GO:0097193 "intrinsic
apoptotic signaling pathway" evidence=TAS] [GO:0007050 "cell cycle
arrest" evidence=TAS] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
UniPathway:UPA00143 GO:GO:0019048 GO:GO:0008285 GO:GO:0000082
GO:GO:0006281 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0007050
GO:GO:0016567 GO:GO:0006511 GO:GO:0097193 eggNOG:COG5647
SUPFAM:SSF75632 GO:GO:0045750 InterPro:IPR016159 SUPFAM:SSF74788
KO:K10609 GO:GO:0031464 HOVERGEN:HBG003619 EMBL:AF077188
EMBL:AY365124 EMBL:AB178950 EMBL:AL136221 EMBL:BC008308
EMBL:AB012193 EMBL:U58090 IPI:IPI00419273 IPI:IPI00549919
RefSeq:NP_001008895.1 RefSeq:NP_003580.1 UniGene:Hs.339735 PDB:2HYE
PDB:4A0K PDBsum:2HYE PDBsum:4A0K ProteinModelPortal:Q13619
SMR:Q13619 DIP:DIP-31610N IntAct:Q13619 MINT:MINT-4532640
STRING:Q13619 PhosphoSite:Q13619 DMDM:108936013 PaxDb:Q13619
PRIDE:Q13619 DNASU:8451 Ensembl:ENST00000326335
Ensembl:ENST00000375440 Ensembl:ENST00000375441
Ensembl:ENST00000451881 GeneID:8451 KEGG:hsa:8451 UCSC:uc010agu.3
CTD:8451 GeneCards:GC13P113863 HGNC:HGNC:2554 MIM:603137
neXtProt:NX_Q13619 PharmGKB:PA27050 InParanoid:Q13619 OMA:KVSATLY
EvolutionaryTrace:Q13619 GenomeRNAi:8451 NextBio:31624
ArrayExpress:Q13619 Bgee:Q13619 CleanEx:HS_CUL4A
Genevestigator:Q13619 GermOnline:ENSG00000139842 GO:GO:0051246
Uniprot:Q13619
Length = 759
Score = 828 (296.5 bits), Expect = 1.3e-82, P = 1.3e-82
Identities = 199/554 (35%), Positives = 308/554 (55%)
Query: 15 MLQDTGAYYSRKASNWILEDSCPEYMIKAEECLKKERDRVSHYLHSSSEPKLVEKVQHEL 74
ML D Y ++ E +C Y + + L +ER+ V YL+ S+ +L E + +
Sbjct: 220 MLSDLQVYKDSFELKFLEETNCL-YAAEGQR-LMQERE-VPEYLNHVSK-RLEE--EGDR 273
Query: 75 LVVYATELLEKEQSGC--RALLREDKVEDLSRMYRLYHKIPKGLEP-VANVFKQHITAEG 131
++ Y +K C + LL E L + L H + + P +A +++ G
Sbjct: 274 VITYLDHSTQKPLIACVEKQLLGEHLTAILQK--GLDHLLDENRVPDLAQMYQLFSRVRG 331
Query: 132 --TVLVQQAEDAATNQGGSS--GAVQEQVLIRKIIELHDKYMEYVTNCFINHTLFHKALK 187
L+Q + G + +++ +++ +++ DK + CF + F +K
Sbjct: 332 GQQALLQHWSEYIKTFGTAIVINPEKDKDMVQDLLDFKDKVDHVIEVCFQKNERFVNLMK 391
Query: 188 EAFEIFCNKAVGGSSSSELLATFCDNILKKGGNEKLSDEAIEETLEKVVKLLAYISDKDL 247
E+FE F NK + +EL+A D+ L+ GN++ +DE +E TL+K++ L +I KD+
Sbjct: 392 ESFETFINKRP--NKPAELIAKHVDSKLR-AGNKEATDEELERTLDKIMILFRFIHGKDV 448
Query: 248 FAEFYRKKLARRLLFDRSANDDHERSILTKLKQQCGGQFTSKMEGMVTDLTLARENQTSF 307
F FY+K LA+RLL +SA+ D E+S+L+KLK +CG FTSK+EGM D+ L+++ F
Sbjct: 449 FEAFYKKDLAKRLLVGKSASVDAEKSMLSKLKHECGAAFTSKLEGMFKDMELSKDIMVHF 508
Query: 308 EEYLSNNQNAHPGIDLSVTVLTTGFWPSYKSSDLNLPSEMVKCVEVFKGFYETKTKHRKL 367
++++ N ++ P IDL+V +LT G+WP+Y +++L EM+K EVFK FY K RKL
Sbjct: 509 KQHMQNQSDSGP-IDLTVNILTMGYWPTYTPMEVHLTPEMIKLQEVFKAFYLGKHSGRKL 567
Query: 368 TWIYSLGQCNINGKFEQKNIELIVSTYQAATLLLFNTSDRLSYSEIMTQLNLTHDDLVRL 427
W +LG + +F++ E VS +Q LL+FN D S+ EI + +L R
Sbjct: 568 QWQTTLGHAVLKAEFKEGKKEFQVSLFQTLVLLMFNEGDGFSFEEIKMATGIEDSELRRT 627
Query: 428 LHSLSCAKYKILLKEPNTKTISQSDHFEFNSKFTDRMRRIKIPL----PPVDERKKIVED 483
L SL+C K ++L+K P K + D F FN +F ++ RIKI V+E+ E
Sbjct: 628 LQSLACGKARVLIKSPKGKEVEDGDKFIFNGEFKHKLFRIKINQIQMKETVEEQVSTTER 687
Query: 484 VDKDRRYAIDAALVRIMKSRKVLGHQQLVSECVEQLSRMFKPDIKAIKKRMEDLITRDYL 543
V +DR+Y IDAA+VRIMK RK LGH LVSE QL KP +KKR+E LI RDY+
Sbjct: 688 VFQDRQYQIDAAIVRIMKMRKTLGHNLLVSELYNQLKFPVKPG--DLKKRIESLIDRDYM 745
Query: 544 ERDKENPNMFRYLA 557
ERDK+NPN + Y+A
Sbjct: 746 ERDKDNPNQYHYVA 759
Score = 211 (79.3 bits), Expect = 1.2e-13, P = 1.2e-13
Identities = 53/196 (27%), Positives = 100/196 (51%)
Query: 1 MGQMDSYEKDFEEHMLQDTGAYYSRKASNWILEDSCPEYMIKAEECLKKERDRVSHYLHS 60
+ + Y+ FE L++T Y+ + + E PEY+ + L++E DRV YL
Sbjct: 221 LSDLQVYKDSFELKFLEETNCLYAAEGQRLMQEREVPEYLNHVSKRLEEEGDRVITYLDH 280
Query: 61 SSEPKLVEKVQHELLVVYATELLEKEQSGCRALLREDKVEDLSRMYRLYHKIPKGLEPVA 120
S++ L+ V+ +LL + T +L+K G LL E++V DL++MY+L+ ++ G + +
Sbjct: 281 STQKPLIACVEKQLLGEHLTAILQK---GLDHLLDENRVPDLAQMYQLFSRVRGGQQALL 337
Query: 121 NVFKQHITAEGTVLVQQAEDAATNQGGSSGAVQEQVLIRKIIELHDKYMEYVTNCFINHT 180
+ ++I GT +V E +++ +++ +++ DK + CF +
Sbjct: 338 QHWSEYIKTFGTAIVINPE-------------KDKDMVQDLLDFKDKVDHVIEVCFQKNE 384
Query: 181 LFHKALKEAFEIFCNK 196
F +KE+FE F NK
Sbjct: 385 RFVNLMKESFETFINK 400
>DICTYBASE|DDB_G0291972 [details] [associations]
symbol:culA "cullin A" species:44689 "Dictyostelium
discoideum" [GO:0030587 "sorocarp development" evidence=IMP]
[GO:0030154 "cell differentiation" evidence=IMP] [GO:0019005 "SCF
ubiquitin ligase complex" evidence=IDA] [GO:0006935 "chemotaxis"
evidence=IMP] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISS] [GO:0000082 "G1/S transition of mitotic cell cycle"
evidence=ISS] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0031461 "cullin-RING ubiquitin ligase complex"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0016567 "protein ubiquitination"
evidence=IEA] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
UniPathway:UPA00143 dictyBase:DDB_G0291972 GO:GO:0030154
GenomeReviews:CM000155_GR GO:GO:0000082 EMBL:AAFI02000187
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0030587 GO:GO:0006935
GO:GO:0006511 GO:GO:0019005 GO:GO:0004842 eggNOG:COG5647
SUPFAM:SSF75632 InterPro:IPR016159 SUPFAM:SSF74788 KO:K03347
OMA:SGVINCY EMBL:AF020287 RefSeq:XP_629756.1 HSSP:Q13616
ProteinModelPortal:O60999 SMR:O60999 STRING:O60999
EnsemblProtists:DDB0185191 GeneID:8628431 KEGG:ddi:DDB_G0291972
ProtClustDB:CLSZ2429454 Uniprot:O60999
Length = 770
Score = 821 (294.1 bits), Expect = 7.4e-82, P = 7.4e-82
Identities = 200/567 (35%), Positives = 315/567 (55%)
Query: 7 YEKDFEEHMLQDTGAYYSRKASNWILEDSCPEYMIKAEECLKKERDRVSHYLHSSSEPKL 66
Y+ FEE L T YY+ +++ +I E+S +YM K E L +E RV YLH ++E +L
Sbjct: 219 YKSGFEELFLTATENYYTNESAKFISENSVADYMKKVETRLNEEVKRVQQYLHQNTESEL 278
Query: 67 VEKVQHELLVVYATELLEKEQSGCRALLREDKVEDLSRMYRLYHKIPKGLEPVANVFKQH 126
+ K + ++L+ E++ E + LL +DK+ DL+RMY L +IP+GLEP+ ++H
Sbjct: 279 IAKCE-KVLIEKHVEVIWNE---FQTLLEKDKIPDLTRMYSLLSRIPRGLEPLRTTLEKH 334
Query: 127 ITAEGTVLVQQAEDAATNQGGSSGAVQEQVLIRKIIELHDKYMEYVTNCFINHTLFHKAL 186
+ G +Q ATN G ++ +V I ++++ KY E VT F + T F +L
Sbjct: 335 VQNVG---LQAVSSIATN-----GVIEPKVYIETLLKVFKKYNELVTGAFRSDTGFVASL 386
Query: 187 KEAFEIFCNK------AVGGSSSSELLATFCDNILKKGGNEKLSDEAIEETLEKVVKLLA 240
+A F N+ A S S ELLA F D +LKK N E +E+ L V+ +
Sbjct: 387 DKACRRFINENAVTIAAKSSSKSPELLARFTDFLLKKSPNNPEESE-MEQLLNDVMIVFK 445
Query: 241 YISDKDLFAEFYRKKLARRLLFDRSANDDHERSILTKLKQQCGGQFTSKMEGMVTDLTLA 300
YI DKD+F +FY K LA+RL+ S ++D E +++ KLK CG ++TSK++ M TD++L+
Sbjct: 446 YIEDKDVFQDFYSKMLAKRLIHGTSTSEDLEGTMIGKLKSTCGYEYTSKLQRMFTDMSLS 505
Query: 301 RENQTSFEEYLSNNQNAHPGIDLSVTVLTTGFWPSYK-SSDLNLPSEMVKCVEVFKGFYE 359
RE F ++ + + ID SV VL TG WP S++ ++P E+ C ++F+ FY+
Sbjct: 506 RELLDRFNNHIEQVERSSLNIDFSVLVLATGSWPLQPPSTNFSIPKELQACEQLFQKFYQ 565
Query: 360 TKTKHRKLTWIYSLGQCNINGKFEQKN---IELIVSTYQAATLLLFNTSDRLSYSEIMTQ 416
+ RKL W++ L + + K+ Q + L STYQ LL FN + L+ EI
Sbjct: 566 NQHSGRKLNWLHHLSKGELKTKYLQTSKSGYTLQCSTYQIGVLLQFNQYETLTSEEIQES 625
Query: 417 LNLTHDDLVRLLHSLSCAKYKILLKEP--NTKTISQSDHFEFNSKFTDRMRRIKIPLPPV 474
L L L SL AK KILL +P + + I+++ F N +F ++ +I I +P +
Sbjct: 626 TQLIDSVLKGTLTSL--AKSKILLADPPLDDEEIAKTTKFSLNKQFKNKKTKIFINVPVL 683
Query: 475 DERKKIVEDVDK----DRRYAIDAALVRIMKSRKVLGHQQLVSECVEQLSRMFKPDIKAI 530
+ K+ ++ + K DR+ I AA+VRIMK RK L H L++E + QL F P + I
Sbjct: 684 TQVKEEIDSIHKTVEEDRKLQIQAAIVRIMKMRKQLAHSGLMTEVISQLQTRFNPKVNII 743
Query: 531 KKRMEDLITRDYLERDKENPNMFRYLA 557
KK ++ LI ++YL R + + + Y+A
Sbjct: 744 KKCIDILIEKEYLMRVEGKKDHYSYVA 770
>UNIPROTKB|F1Q284 [details] [associations]
symbol:CUL4A "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0031461 "cullin-RING ubiquitin ligase complex"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006511 SUPFAM:SSF75632
GO:GO:0031461 InterPro:IPR016159 SUPFAM:SSF74788
GeneTree:ENSGT00550000074299 KO:K10609 CTD:8451 OMA:KVSATLY
EMBL:AAEX03013408 RefSeq:XP_849542.3 Ensembl:ENSCAFT00000010211
GeneID:607683 KEGG:cfa:607683 Uniprot:F1Q284
Length = 761
Score = 816 (292.3 bits), Expect = 2.5e-81, P = 2.5e-81
Identities = 198/555 (35%), Positives = 308/555 (55%)
Query: 15 MLQDTGAYYSRKASNWILEDSCPEYMIKAEECLKKERDRVSHYLHSSSEPKLVEKVQHEL 74
ML D Y ++ E +C Y + + L +ER+ V YL+ S+ +L E + +
Sbjct: 222 MLSDLQVYKDSFELKFLEETNCL-YAAEGQR-LMQERE-VPEYLNHVSK-RLEE--EGDR 275
Query: 75 LVVYATELLEKEQSGC--RALLREDKVEDLSRMYRLYHKIPKGLEP-VANVFKQHITAEG 131
++ Y +K C + LL E L + L H + + P + +++ +G
Sbjct: 276 VITYLDHSTQKPLIACVEKQLLGEHLTAILHK--GLDHLLDENRVPDLTQMYQLFSRVKG 333
Query: 132 --TVLVQQAEDAATNQGGSS--GAVQEQVLIRKIIELHDKYMEYVTNCFINHTLFHKALK 187
+L+Q + G + +++ +++ +++ D+ + CF + F +K
Sbjct: 334 GQQILLQHWSEYIKTFGTTIVINPEKDKDMVQDLLDFKDRVDHVIEVCFQRNEKFINLMK 393
Query: 188 EAFEIFCNKAVGGSSSSELLATFCDNILKKGGNEKLSDEAIEETLEKVVKLLAYISDKDL 247
E+FE F NK + +EL+A D+ L+ GN++ +DE +E L+KV+ + +I KD+
Sbjct: 394 ESFETFINKRP--NKPAELIAKHVDSKLR-AGNKEATDEELERILDKVMIIFRFIHGKDV 450
Query: 248 FAEFYRKKLARRLLFDRSANDDHERSILTKLKQQCGGQFTSKMEGMVTDLTLARENQTSF 307
F FY+K LA+RLL +SA+ D E+S+L+KLK +CG FTSK+EGM D+ L+++ F
Sbjct: 451 FEAFYKKDLAKRLLVGKSASVDAEKSMLSKLKHECGAAFTSKLEGMFKDMELSKDIMVQF 510
Query: 308 EEYLSNNQNAHPG-IDLSVTVLTTGFWPSYKSSDLNLPSEMVKCVEVFKGFYETKTKHRK 366
++Y+ N + PG IDL+V +LT G+WP+Y +++L EM+K EVFK FY K RK
Sbjct: 511 KQYMQNQSD--PGSIDLTVNILTMGYWPTYTPMEVHLTPEMIKLQEVFKTFYLGKHSGRK 568
Query: 367 LTWIYSLGQCNINGKFEQKNIELIVSTYQAATLLLFNTSDRLSYSEIMTQLNLTHDDLVR 426
L W +LG + +F++ E VS +Q LL+FN D S+ EI + +L R
Sbjct: 569 LQWQTTLGHAVLKAEFKEGKKEFQVSLFQTLVLLMFNEGDGFSFEEIKMATGIEDSELRR 628
Query: 427 LLHSLSCAKYKILLKEPNTKTISQSDHFEFNSKFTDRMRRIKIPL----PPVDERKKIVE 482
L SL+C K ++L+K P K + D F FN +F ++ RIKI V+E+ E
Sbjct: 629 TLQSLACGKARVLVKSPKGKEVEDGDTFMFNGEFKHKLFRIKINQIQMKETVEEQVSTTE 688
Query: 483 DVDKDRRYAIDAALVRIMKSRKVLGHQQLVSECVEQLSRMFKPDIKAIKKRMEDLITRDY 542
V +DR+Y IDAA+VRIMK RK LGH LVSE QL KP +KKR+E LI RDY
Sbjct: 689 RVFQDRQYQIDAAIVRIMKMRKTLGHNLLVSELYNQLKFPVKPG--DLKKRIESLIDRDY 746
Query: 543 LERDKENPNMFRYLA 557
+ERDK+NPN + Y+A
Sbjct: 747 MERDKDNPNQYHYVA 761
Score = 205 (77.2 bits), Expect = 5.6e-13, P = 5.6e-13
Identities = 52/196 (26%), Positives = 99/196 (50%)
Query: 1 MGQMDSYEKDFEEHMLQDTGAYYSRKASNWILEDSCPEYMIKAEECLKKERDRVSHYLHS 60
+ + Y+ FE L++T Y+ + + E PEY+ + L++E DRV YL
Sbjct: 223 LSDLQVYKDSFELKFLEETNCLYAAEGQRLMQEREVPEYLNHVSKRLEEEGDRVITYLDH 282
Query: 61 SSEPKLVEKVQHELLVVYATELLEKEQSGCRALLREDKVEDLSRMYRLYHKIPKGLEPVA 120
S++ L+ V+ +LL + T +L K G LL E++V DL++MY+L+ ++ G + +
Sbjct: 283 STQKPLIACVEKQLLGEHLTAILHK---GLDHLLDENRVPDLTQMYQLFSRVKGGQQILL 339
Query: 121 NVFKQHITAEGTVLVQQAEDAATNQGGSSGAVQEQVLIRKIIELHDKYMEYVTNCFINHT 180
+ ++I GT +V E +++ +++ +++ D+ + CF +
Sbjct: 340 QHWSEYIKTFGTTIVINPE-------------KDKDMVQDLLDFKDRVDHVIEVCFQRNE 386
Query: 181 LFHKALKEAFEIFCNK 196
F +KE+FE F NK
Sbjct: 387 KFINLMKESFETFINK 402
>MGI|MGI:1914487 [details] [associations]
symbol:Cul4a "cullin 4A" species:10090 "Mus musculus"
[GO:0006281 "DNA repair" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0006974 "response to DNA damage stimulus" evidence=IEA]
[GO:0007346 "regulation of mitotic cell cycle" evidence=IMP]
[GO:0019048 "virus-host interaction" evidence=IEA] [GO:0031461
"cullin-RING ubiquitin ligase complex" evidence=IEA] [GO:0031464
"Cul4A-RING ubiquitin ligase complex" evidence=ISO] [GO:0031625
"ubiquitin protein ligase binding" evidence=IEA] [GO:0045732
"positive regulation of protein catabolic process" evidence=ISO]
[GO:0045750 "positive regulation of S phase of mitotic cell cycle"
evidence=IMP] [GO:0051246 "regulation of protein metabolic process"
evidence=IMP] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISO] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
UniPathway:UPA00143 MGI:MGI:1914487 GO:GO:0019048 GO:GO:0006281
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0016567 GO:GO:0006511
GO:GO:0045732 eggNOG:COG5647 SUPFAM:SSF75632 GO:GO:0045750
InterPro:IPR016159 SUPFAM:SSF74788 GeneTree:ENSGT00550000074299
HOGENOM:HOG000176712 KO:K10609 GO:GO:0031464 HOVERGEN:HBG003619
CTD:8451 EMBL:AK168215 EMBL:AK170722 EMBL:BC010211 IPI:IPI00321407
RefSeq:NP_666319.2 UniGene:Mm.212861 ProteinModelPortal:Q3TCH7
SMR:Q3TCH7 STRING:Q3TCH7 PhosphoSite:Q3TCH7 PaxDb:Q3TCH7
PRIDE:Q3TCH7 Ensembl:ENSMUST00000016680 GeneID:99375 KEGG:mmu:99375
UCSC:uc009kww.2 InParanoid:Q3TCH7 OMA:DREVPEY OrthoDB:EOG42FSH0
ChiTaRS:CUL4A NextBio:353901 Bgee:Q3TCH7 CleanEx:MM_CUL4A
Genevestigator:Q3TCH7 GermOnline:ENSMUSG00000031446 Uniprot:Q3TCH7
Length = 759
Score = 812 (290.9 bits), Expect = 6.6e-81, P = 6.6e-81
Identities = 200/555 (36%), Positives = 308/555 (55%)
Query: 15 MLQDTGAYYSRKASNWILEDSCPEYMIKAEECLKKERDRVSHYLHSSSEPKLVEKVQHEL 74
ML D Y ++ E +C Y + + L ++R+ V YL+ S+ +L E+
Sbjct: 220 MLSDLQVYKDSFELKFLEETNCL-YAAEGQR-LMQDRE-VPEYLNHVSK-RLEEEADR-- 273
Query: 75 LVVYATELLEKEQSGC--RALLREDKVEDLSRMYRLYHKIPKGLEP-VANVFKQHITAEG 131
++ Y +K C + LL E L + L H + + P + +++ +G
Sbjct: 274 VITYLDHSTQKPLIACVEKQLLGEHLTAILQK--GLEHLLDENRVPDLTQMYQLFSRVKG 331
Query: 132 T--VLVQQAEDAATNQGGSS--GAVQEQVLIRKIIELHDKYMEYVTNCFINHTLFHKALK 187
L+Q + G + +++ +++ +++ DK V CF + F +K
Sbjct: 332 GQHALLQHWSEYIKTFGTTIVINPEKDKDMVQDLLDFKDKVDHVVEVCFQRNERFINLMK 391
Query: 188 EAFEIFCNKAVGGSSSSELLATFCDNILKKGGNEKLSDEAIEETLEKVVKLLAYISDKDL 247
E+FE F NK + +EL+A D+ L+ GN++ +DE +E L+K++ L +I KD+
Sbjct: 392 ESFETFINKRP--NKPAELIAKHVDSKLR-AGNKEATDEELERILDKIMILFRFIHGKDV 448
Query: 248 FAEFYRKKLARRLLFDRSANDDHERSILTKLKQQCGGQFTSKMEGMVTDLTLARENQTSF 307
F FY+K LA+RLL +SA+ D E+S+L+KLK +CG FTSK+EGM D+ L+++ F
Sbjct: 449 FEAFYKKDLAKRLLVGKSASVDAEKSMLSKLKHECGAAFTSKLEGMFKDMELSKDIMVHF 508
Query: 308 EEYLSNNQNAHPG-IDLSVTVLTTGFWPSYKSSDLNLPSEMVKCVEVFKGFYETKTKHRK 366
++++ N Q+A PG IDL+V +LT G+WP+Y +++LP EMV+ EVFK FY K RK
Sbjct: 509 KQHMQN-QSA-PGPIDLTVNILTMGYWPTYTPMEVHLPPEMVRLQEVFKTFYLGKHSGRK 566
Query: 367 LTWIYSLGQCNINGKFEQKNIELIVSTYQAATLLLFNTSDRLSYSEIMTQLNLTHDDLVR 426
L W +LG + F++ E VS +Q LL+FN D S+ EI + +L R
Sbjct: 567 LQWQTTLGHAVLKADFKEGKKEFQVSLFQTLVLLMFNEGDGFSFEEIKMATGIEDSELRR 626
Query: 427 LLHSLSCAKYKILLKEPNTKTISQSDHFEFNSKFTDRMRRIKIPL----PPVDERKKIVE 482
L SL+C K ++L+K P K + D F FN+ F ++ RIKI V+E+ E
Sbjct: 627 TLQSLACGKARVLIKSPKGKEVEDGDKFIFNADFKHKLFRIKINQIQMKETVEEQVSTTE 686
Query: 483 DVDKDRRYAIDAALVRIMKSRKVLGHQQLVSECVEQLSRMFKPDIKAIKKRMEDLITRDY 542
V +DR+Y IDAA+VRIMK RK LGH LVSE QL KP +KKR+E LI RDY
Sbjct: 687 RVFQDRQYQIDAAIVRIMKMRKTLGHNLLVSELYNQLKFPVKPG--DLKKRIESLIDRDY 744
Query: 543 LERDKENPNMFRYLA 557
+ERDK++PN + Y+A
Sbjct: 745 MERDKDSPNQYHYVA 759
Score = 211 (79.3 bits), Expect = 1.2e-13, P = 1.2e-13
Identities = 53/196 (27%), Positives = 99/196 (50%)
Query: 1 MGQMDSYEKDFEEHMLQDTGAYYSRKASNWILEDSCPEYMIKAEECLKKERDRVSHYLHS 60
+ + Y+ FE L++T Y+ + + + PEY+ + L++E DRV YL
Sbjct: 221 LSDLQVYKDSFELKFLEETNCLYAAEGQRLMQDREVPEYLNHVSKRLEEEADRVITYLDH 280
Query: 61 SSEPKLVEKVQHELLVVYATELLEKEQSGCRALLREDKVEDLSRMYRLYHKIPKGLEPVA 120
S++ L+ V+ +LL + T +L+K G LL E++V DL++MY+L+ ++ G +
Sbjct: 281 STQKPLIACVEKQLLGEHLTAILQK---GLEHLLDENRVPDLTQMYQLFSRVKGGQHALL 337
Query: 121 NVFKQHITAEGTVLVQQAEDAATNQGGSSGAVQEQVLIRKIIELHDKYMEYVTNCFINHT 180
+ ++I GT +V E +++ +++ +++ DK V CF +
Sbjct: 338 QHWSEYIKTFGTTIVINPE-------------KDKDMVQDLLDFKDKVDHVVEVCFQRNE 384
Query: 181 LFHKALKEAFEIFCNK 196
F +KE+FE F NK
Sbjct: 385 RFINLMKESFETFINK 400
>UNIPROTKB|F1N3S4 [details] [associations]
symbol:CUL4A "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0051246 "regulation of protein metabolic process"
evidence=IEA] [GO:0045750 "positive regulation of S phase of
mitotic cell cycle" evidence=IEA] [GO:0031464 "Cul4A-RING ubiquitin
ligase complex" evidence=IEA] [GO:0031625 "ubiquitin protein ligase
binding" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=IEA] InterPro:IPR001373
InterPro:IPR016157 InterPro:IPR016158 InterPro:IPR019559
Pfam:PF00888 Pfam:PF10557 PROSITE:PS01256 PROSITE:PS50069
SMART:SM00182 SMART:SM00884 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0006511 SUPFAM:SSF75632 GO:GO:0045750 InterPro:IPR016159
SUPFAM:SSF74788 GeneTree:ENSGT00550000074299 GO:GO:0031464
OMA:KVSATLY GO:GO:0051246 EMBL:DAAA02034947 IPI:IPI00699975
Ensembl:ENSBTAT00000026769 Uniprot:F1N3S4
Length = 720
Score = 811 (290.5 bits), Expect = 8.5e-81, P = 8.5e-81
Identities = 199/555 (35%), Positives = 304/555 (54%)
Query: 15 MLQDTGAYYSRKASNWILEDSCPEYMIKAEECLKKERDRVSHYLHSSSEPKLVEKVQHEL 74
ML D Y ++ E +C Y + + L +ER+ V YL S+ +L E+
Sbjct: 181 MLSDLQVYKDSFELKFLEETNCL-YAAEGQR-LMQERE-VPEYLDHVSK-RLEEEADR-- 234
Query: 75 LVVYATELLEKEQSGC--RALLREDKVEDLSRMYRLYHKIPKGLEP-VANVFKQHITAEG 131
++ Y +K C + LL E L + L H + + P + +++ G
Sbjct: 235 VITYLDHSTQKPLIACVEKQLLGEHLTAILQK--GLDHLLDENRVPDLTQMYQLFSRVRG 292
Query: 132 --TVLVQQAEDAATNQGGSS--GAVQEQVLIRKIIELHDKYMEYVTNCFINHTLFHKALK 187
L+Q D G + +++ +++ +++ D+ + CF F +K
Sbjct: 293 GQQALLQHWSDYIKTFGTTIVINPEKDKDMVQDLLDFKDRVDHVIDVCFQRSEKFVNLMK 352
Query: 188 EAFEIFCNKAVGGSSSSELLATFCDNILKKGGNEKLSDEAIEETLEKVVKLLAYISDKDL 247
E+FE F NK + +EL+A D+ L+ GN++ +DE +E L+KV+ L +I KD+
Sbjct: 353 ESFETFINKRP--NKPAELIAKHVDSKLR-AGNKEATDEELERMLDKVMILFRFIHGKDV 409
Query: 248 FAEFYRKKLARRLLFDRSANDDHERSILTKLKQQCGGQFTSKMEGMVTDLTLARENQTSF 307
F FY+K LA+RLL +SA+ D E+S+L+KLK +CG FTSK+EGM D+ L+++ F
Sbjct: 410 FEAFYKKDLAKRLLVGKSASVDAEKSMLSKLKHECGAAFTSKLEGMFKDMELSKDIMVHF 469
Query: 308 EEYLSNNQNAHPG-IDLSVTVLTTGFWPSYKSSDLNLPSEMVKCVEVFKGFYETKTKHRK 366
++Y+ N + PG IDL+V +LT G+WP+Y +++L EM+K EVFK FY K RK
Sbjct: 470 KQYMQNQSD--PGSIDLTVNILTMGYWPTYTPMEVHLTPEMIKLQEVFKTFYLGKHSGRK 527
Query: 367 LTWIYSLGQCNINGKFEQKNIELIVSTYQAATLLLFNTSDRLSYSEIMTQLNLTHDDLVR 426
L W +LG + +F++ E VS +Q LL+FN D S+ +I + +L R
Sbjct: 528 LQWQTTLGHAVLKAEFKEGKKEFQVSLFQTLVLLMFNEGDGFSFEDIRMATGIEDSELRR 587
Query: 427 LLHSLSCAKYKILLKEPNTKTISQSDHFEFNSKFTDRMRRIKIPL----PPVDERKKIVE 482
L SL+C K ++LLK P K + D F FN++F ++ RIKI V+E+ E
Sbjct: 588 TLQSLACGKARVLLKSPKGKEVEDGDKFLFNAEFKHKLFRIKINQIQMKETVEEQVSTTE 647
Query: 483 DVDKDRRYAIDAALVRIMKSRKVLGHQQLVSECVEQLSRMFKPDIKAIKKRMEDLITRDY 542
V +DR+Y IDAA+VRIMK RK LGH LVSE QL KP +KKR+E LI RDY
Sbjct: 648 RVFQDRQYQIDAAIVRIMKMRKTLGHNLLVSELYNQLKFPVKPG--DLKKRIESLIDRDY 705
Query: 543 LERDKENPNMFRYLA 557
+ERDK++PN + Y+A
Sbjct: 706 MERDKDSPNQYHYVA 720
Score = 205 (77.2 bits), Expect = 5.2e-13, P = 5.2e-13
Identities = 52/196 (26%), Positives = 98/196 (50%)
Query: 1 MGQMDSYEKDFEEHMLQDTGAYYSRKASNWILEDSCPEYMIKAEECLKKERDRVSHYLHS 60
+ + Y+ FE L++T Y+ + + E PEY+ + L++E DRV YL
Sbjct: 182 LSDLQVYKDSFELKFLEETNCLYAAEGQRLMQEREVPEYLDHVSKRLEEEADRVITYLDH 241
Query: 61 SSEPKLVEKVQHELLVVYATELLEKEQSGCRALLREDKVEDLSRMYRLYHKIPKGLEPVA 120
S++ L+ V+ +LL + T +L+K G LL E++V DL++MY+L+ ++ G + +
Sbjct: 242 STQKPLIACVEKQLLGEHLTAILQK---GLDHLLDENRVPDLTQMYQLFSRVRGGQQALL 298
Query: 121 NVFKQHITAEGTVLVQQAEDAATNQGGSSGAVQEQVLIRKIIELHDKYMEYVTNCFINHT 180
+ +I GT +V E +++ +++ +++ D+ + CF
Sbjct: 299 QHWSDYIKTFGTTIVINPE-------------KDKDMVQDLLDFKDRVDHVIDVCFQRSE 345
Query: 181 LFHKALKEAFEIFCNK 196
F +KE+FE F NK
Sbjct: 346 KFVNLMKESFETFINK 361
>UNIPROTKB|F1RN43 [details] [associations]
symbol:CUL4A "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0051246 "regulation of protein metabolic process"
evidence=IEA] [GO:0045750 "positive regulation of S phase of
mitotic cell cycle" evidence=IEA] [GO:0031464 "Cul4A-RING ubiquitin
ligase complex" evidence=IEA] [GO:0031625 "ubiquitin protein ligase
binding" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=IEA] InterPro:IPR001373
InterPro:IPR016157 InterPro:IPR016158 InterPro:IPR019559
Pfam:PF00888 Pfam:PF10557 PROSITE:PS01256 PROSITE:PS50069
SMART:SM00182 SMART:SM00884 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0006511 SUPFAM:SSF75632 GO:GO:0045750 InterPro:IPR016159
SUPFAM:SSF74788 GeneTree:ENSGT00550000074299 GO:GO:0031464
OMA:KVSATLY GO:GO:0051246 EMBL:FP236214 Ensembl:ENSSSCT00000010475
Uniprot:F1RN43
Length = 761
Score = 808 (289.5 bits), Expect = 1.8e-80, P = 1.8e-80
Identities = 198/555 (35%), Positives = 304/555 (54%)
Query: 15 MLQDTGAYYSRKASNWILEDSCPEYMIKAEECLKKERDRVSHYLHSSSEPKLVEKVQHEL 74
ML D Y ++ E +C Y + + L +ER+ V YL+ S+ +L E + +
Sbjct: 222 MLSDLQVYKDSFELKFLEETNCL-YAAEGQR-LMQERE-VPEYLNHVSK-RLEE--EGDR 275
Query: 75 LVVYATELLEKEQSGC--RALLREDKVEDLSRMYRLYHKIPKGLEP-VANVFKQHITAEG 131
++ Y +K C + LL E L + L H + + P + +++ G
Sbjct: 276 VITYLDHSTQKPLIACVEKQLLGEHLTAILQK--GLDHLLDENRVPDLTQMYQLFSRVRG 333
Query: 132 --TVLVQQAEDAATNQGGSS--GAVQEQVLIRKIIELHDKYMEYVTNCFINHTLFHKALK 187
L+Q + G + +++ +++ +++ D+ + CF + F +K
Sbjct: 334 GQQALLQHWSEYIKTFGTTIVINPEKDKDMVQDLLDFKDRVDHVIDVCFQRNEKFINLMK 393
Query: 188 EAFEIFCNKAVGGSSSSELLATFCDNILKKGGNEKLSDEAIEETLEKVVKLLAYISDKDL 247
E+FE F NK + +EL+A D+ L+ GN++ +DE +E L+KV+ + +I KD+
Sbjct: 394 ESFEAFINKRP--NKPAELIAKHVDSKLR-AGNKEATDEELERILDKVMIIFRFIHGKDV 450
Query: 248 FAEFYRKKLARRLLFDRSANDDHERSILTKLKQQCGGQFTSKMEGMVTDLTLARENQTSF 307
F FY+K LA+RLL +SA+ D E+S+L+KLK +CG FTSK+EGM D+ L+++ F
Sbjct: 451 FEAFYKKDLAKRLLVGKSASVDAEKSMLSKLKHECGAAFTSKLEGMFKDMELSKDIMVHF 510
Query: 308 EEYLSNNQNAHPG-IDLSVTVLTTGFWPSYKSSDLNLPSEMVKCVEVFKGFYETKTKHRK 366
++Y+ N + PG IDL+V +LT G+WP+Y D++L EMVK EVFK FY K RK
Sbjct: 511 KQYMQNQSD--PGSIDLTVNILTMGYWPTYTPMDVHLTPEMVKLQEVFKTFYLGKHSGRK 568
Query: 367 LTWIYSLGQCNINGKFEQKNIELIVSTYQAATLLLFNTSDRLSYSEIMTQLNLTHDDLVR 426
L W +LG + +F++ E VS +Q LL+FN D + EI + +L R
Sbjct: 569 LQWQTALGHAVLKAEFKEGKKEFQVSLFQTLVLLMFNEGDGFGFEEIKAATGIEDSELRR 628
Query: 427 LLHSLSCAKYKILLKEPNTKTISQSDHFEFNSKFTDRMRRIKIPL----PPVDERKKIVE 482
L SL+C K ++L+K P K + D F FN F ++ RIKI V+E+ E
Sbjct: 629 TLQSLACGKARVLIKSPKGKEVEDGDKFFFNGDFKHKLFRIKINQIQMKETVEEQVSTTE 688
Query: 483 DVDKDRRYAIDAALVRIMKSRKVLGHQQLVSECVEQLSRMFKPDIKAIKKRMEDLITRDY 542
V +DR+Y IDAA+VRIMK RK LGH LVSE QL KP +KKR+E LI RDY
Sbjct: 689 RVFQDRQYQIDAAIVRIMKMRKTLGHNLLVSELYNQLKFPVKPG--DLKKRIESLIDRDY 746
Query: 543 LERDKENPNMFRYLA 557
+ERDK++PN + Y+A
Sbjct: 747 MERDKDSPNQYHYVA 761
Score = 208 (78.3 bits), Expect = 2.6e-13, P = 2.6e-13
Identities = 52/196 (26%), Positives = 100/196 (51%)
Query: 1 MGQMDSYEKDFEEHMLQDTGAYYSRKASNWILEDSCPEYMIKAEECLKKERDRVSHYLHS 60
+ + Y+ FE L++T Y+ + + E PEY+ + L++E DRV YL
Sbjct: 223 LSDLQVYKDSFELKFLEETNCLYAAEGQRLMQEREVPEYLNHVSKRLEEEGDRVITYLDH 282
Query: 61 SSEPKLVEKVQHELLVVYATELLEKEQSGCRALLREDKVEDLSRMYRLYHKIPKGLEPVA 120
S++ L+ V+ +LL + T +L+K G LL E++V DL++MY+L+ ++ G + +
Sbjct: 283 STQKPLIACVEKQLLGEHLTAILQK---GLDHLLDENRVPDLTQMYQLFSRVRGGQQALL 339
Query: 121 NVFKQHITAEGTVLVQQAEDAATNQGGSSGAVQEQVLIRKIIELHDKYMEYVTNCFINHT 180
+ ++I GT +V E +++ +++ +++ D+ + CF +
Sbjct: 340 QHWSEYIKTFGTTIVINPE-------------KDKDMVQDLLDFKDRVDHVIDVCFQRNE 386
Query: 181 LFHKALKEAFEIFCNK 196
F +KE+FE F NK
Sbjct: 387 KFINLMKESFEAFINK 402
>ZFIN|ZDB-GENE-040426-2887 [details] [associations]
symbol:cul1b "cullin 1b" species:7955 "Danio
rerio" [GO:0031461 "cullin-RING ubiquitin ligase complex"
evidence=IEA] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
ZFIN:ZDB-GENE-040426-2887 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0006511 SUPFAM:SSF75632 GO:GO:0031461 InterPro:IPR016159
SUPFAM:SSF74788 GeneTree:ENSGT00550000074299 EMBL:BX005392
IPI:IPI00609210 Ensembl:ENSDART00000134947 ArrayExpress:F1Q7M5
Bgee:F1Q7M5 Uniprot:F1Q7M5
Length = 775
Score = 808 (289.5 bits), Expect = 1.8e-80, P = 1.8e-80
Identities = 200/568 (35%), Positives = 318/568 (55%)
Query: 7 YEKDFEEHMLQDTGAYYSRKASNWILEDSCPEYMIKAEECLKKERDRVSHYLHSSSEPKL 66
Y++ FE L DT +Y+R+++ ++ ++ EYM KAE L +E+ RV YLH S++ +L
Sbjct: 226 YKEYFEAQFLADTERFYTRESTEFLQQNPVTEYMKKAEARLLEEQRRVQVYLHESTQDEL 285
Query: 67 VEKVQHELLVVYATELLEKEQSGCRALLREDKVEDLSRMYRLYHKIPKGLEPVANVFKQH 126
K + ++L+ E+ E LL DK EDL RMY L +I GL + + + H
Sbjct: 286 ARKCE-QVLIEKHLEIFHTEFQN---LLDADKNEDLGRMYNLVSRITDGLGELKKLLESH 341
Query: 127 ITAEGTVLVQQAEDAATNQGGSSGAVQEQVLIRKIIELHDKYMEYVTNCFINHTLFHKAL 186
I +G +++ D+A N ++ ++ +++H KY V + F N F AL
Sbjct: 342 IHNQGLAAIEKCGDSALND--------PKMYVQTTLDVHKKYNALVMSAFNNDAGFVAAL 393
Query: 187 -KEAFEIFCNK------AVGGSSSSELLATFCDNILKKGGNEKLSDEA-IEETLEKVVKL 238
K A F N A S S ELLA +CD++LKK + K +EA +E+TL +V+ +
Sbjct: 394 DKVACGRFINNNAVTRMAQSSSKSPELLARYCDSLLKK--SSKNPEEAELEDTLNQVMVV 451
Query: 239 LAYISDKDLFAEFYRKKLARRLLFDRSANDDHERSILTKLKQQCGGQFTSKMEGMVTDLT 298
YI DKD+F +FY K LA+RL+ SA+DD E S+++KLKQ CG ++TSK++ M D+
Sbjct: 452 FKYIEDKDVFQKFYAKMLAKRLVHQNSASDDAEASMISKLKQACGFEYTSKLQRMFQDIG 511
Query: 299 LARENQTSFEEYLSNNQNAHPGIDLSVTVLTTGFWPSYKSSDLNLPSEMVKCVEVFKGFY 358
++++ F+++LSN++ +D S+ VL++G WP +S LPSE+ + + F FY
Sbjct: 512 VSKDLNEQFKKHLSNSEPLD--LDFSIQVLSSGSWPFQQSCTFALPSELERSYQRFTAFY 569
Query: 359 ETKTKHRKLTWIYSLGQCNINGKFEQKNIELIVSTYQAATLLLFNTSDRLSYSEIMTQLN 418
++ RKLTW+Y L + + + L ST+Q A LL FNT + S ++
Sbjct: 570 GSRHSGRKLTWLYHLSKGELVTNCFKNRYTLQASTFQMAILLQFNTENCYSVQQLADSTQ 629
Query: 419 LTHDDLVRLLHSLSCAKYKILLKEPNTKTISQSDH-----FEFNSKFTDRMRRIKIPLPP 473
+ D LV++L L K K+L+ E I + D + + ++ R+ I +P
Sbjct: 630 IKTDILVQVLQIL--LKSKLLVLEDENANIDEMDFKPDTLIKLFLGYKNKKLRVNINVPM 687
Query: 474 VDERKKIVE----DVDKDRRYAIDAALVRIMKSRKVLGHQQLVSECVEQLSRMFKPDIKA 529
E+K+ E ++++DR+ I AA+VRIMK RKVL HQQL++E + QLS FKP +
Sbjct: 688 KTEQKQEQETTHKNIEEDRKLLIQAAIVRIMKMRKVLKHQQLLAEVLNQLSSRFKPRVPV 747
Query: 530 IKKRMEDLITRDYLERDKENPNMFRYLA 557
IKK ++ LI ++YLER + + YLA
Sbjct: 748 IKKCIDILIEKEYLERVDGEKDTYSYLA 775
>UNIPROTKB|E1C0W8 [details] [associations]
symbol:CUL1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0006513 "protein monoubiquitination"
evidence=IEA] [GO:0006915 "apoptotic process" evidence=IEA]
[GO:0008283 "cell proliferation" evidence=IEA] [GO:0009887 "organ
morphogenesis" evidence=IEA] [GO:0019005 "SCF ubiquitin ligase
complex" evidence=IEA] [GO:0031146 "SCF-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=IEA]
InterPro:IPR001373 InterPro:IPR016157 InterPro:IPR016158
InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557 PROSITE:PS01256
PROSITE:PS50069 SMART:SM00182 SMART:SM00884 GO:GO:0006915
GO:GO:0008283 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006511
GO:GO:0019005 SUPFAM:SSF75632 GO:GO:0006513 InterPro:IPR016159
SUPFAM:SSF74788 GeneTree:ENSGT00550000074299 OMA:SGVINCY
EMBL:AADN02027289 EMBL:AADN02027286 EMBL:AADN02027287
EMBL:AADN02027288 IPI:IPI00590577 Ensembl:ENSGALT00000020252
Uniprot:E1C0W8
Length = 777
Score = 807 (289.1 bits), Expect = 2.2e-80, P = 2.2e-80
Identities = 195/565 (34%), Positives = 317/565 (56%)
Query: 7 YEKDFEEHMLQDTGAYYSRKASNWILEDSCPEYMIKAEECLKKERDRVSHYLHSSSEPKL 66
Y++ FE L DT +Y+R+++ ++ ++ EYM KAE L +E+ RV YLH S++ +L
Sbjct: 229 YKESFESQFLADTERFYTRESTEFLQQNPVTEYMKKAEARLLEEQRRVQVYLHESTQDEL 288
Query: 67 VEKVQHELLVVYATELLEKEQSGCRALLREDKVEDLSRMYRLYHKIPKGLEPVANVFKQH 126
K + ++L+ E+ E LL DK EDL RMY L +I GL + + + H
Sbjct: 289 ARKCE-QVLIEKHLEIFHTEFQN---LLDADKNEDLGRMYNLVSRIQDGLGELKKLLETH 344
Query: 127 ITAEGTVLVQQAEDAATNQGGSSGAVQEQVLIRKIIELHDKYMEYVTNCFINHTLFHKAL 186
I +G +++ +AA N ++ ++ ++++H KY V + F N F AL
Sbjct: 345 IHNQGLAAIEKCGEAALND--------PKMYVQTVLDVHKKYNALVMSAFNNDAGFVAAL 396
Query: 187 KEAFEIFCNK------AVGGSSSSELLATFCDNILKKGGNEKLSDEA-IEETLEKVVKLL 239
+A F N A S S ELLA +CD++LKK + K +EA +E+TL +V+ +
Sbjct: 397 DKACGRFINNNAVTKMAQSSSKSPELLARYCDSLLKK--SSKNPEEAELEDTLNQVMVVF 454
Query: 240 AYISDKDLFAEFYRKKLARRLLFDRSANDDHERSILTKLKQQCGGQFTSKMEGMVTDLTL 299
YI DKD+F +FY K LA+RL+ SA+DD E S+++KLKQ CG ++TSK++ M D+ +
Sbjct: 455 KYIEDKDVFQKFYAKMLAKRLVHQNSASDDAEASMISKLKQACGFEYTSKLQRMFQDIGV 514
Query: 300 ARENQTSFEEYLSNNQNAHPGIDLSVTVLTTGFWPSYKSSDLNLPSEMVKCVEVFKGFYE 359
+++ F+++L+N++ +D S+ VL++G WP +S LPSE+ + + F FY
Sbjct: 515 SKDLNEQFKKHLTNSEPLD--LDFSIQVLSSGSWPFQQSCTFALPSELERSYQRFTAFYA 572
Query: 360 TKTKHRKLTWIYSLGQCNINGKFEQKNIELIVSTYQAATLLLFNTSDRLSYSEIMTQLNL 419
++ RKLTW+Y L + + + L ST+Q A LL +NT D + ++ +
Sbjct: 573 SRHSGRKLTWLYQLSKGELVTNCFKNRYTLQASTFQMAILLQYNTEDAYTVQQLTDSTQI 632
Query: 420 THDDLVRLLHSLSCAKYKILLKE-PNTKTIS-QSDHF-EFNSKFTDRMRRIKIPLPPVDE 476
D L ++L L +K +L E N + + D + + ++ R+ I +P E
Sbjct: 633 KMDILAQVLQILLKSKLLVLEDENANVDEVELKPDTLIKLYLGYKNKKLRVNINVPMKTE 692
Query: 477 RKKIVE----DVDKDRRYAIDAALVRIMKSRKVLGHQQLVSECVEQLSRMFKPDIKAIKK 532
+K+ E ++++DR+ I AA+VRIMK RKVL HQQL+ E + QLS FKP + IKK
Sbjct: 693 QKQEQETTHKNIEEDRKLLIQAAIVRIMKMRKVLKHQQLLGEVLTQLSSRFKPRVPVIKK 752
Query: 533 RMEDLITRDYLERDKENPNMFRYLA 557
++ LI ++YLER + + YLA
Sbjct: 753 CIDILIEKEYLERVDGEKDTYSYLA 777
>UNIPROTKB|F1MYD0 [details] [associations]
symbol:CUL1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0031146 "SCF-dependent proteasomal ubiquitin-dependent
protein catabolic process" evidence=IEA] [GO:0019005 "SCF ubiquitin
ligase complex" evidence=IEA] [GO:0009887 "organ morphogenesis"
evidence=IEA] [GO:0008283 "cell proliferation" evidence=IEA]
[GO:0006915 "apoptotic process" evidence=IEA] [GO:0006513 "protein
monoubiquitination" evidence=IEA] [GO:0031625 "ubiquitin protein
ligase binding" evidence=IEA] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
GO:GO:0006915 GO:GO:0008283 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0009887 GO:GO:0006511 GO:GO:0019005 SUPFAM:SSF75632
GO:GO:0006513 InterPro:IPR016159 SUPFAM:SSF74788
GeneTree:ENSGT00550000074299 KO:K03347 OMA:SGVINCY CTD:8454
EMBL:DAAA02011928 IPI:IPI01002552 RefSeq:NP_001180162.1
UniGene:Bt.6490 ProteinModelPortal:F1MYD0
Ensembl:ENSBTAT00000011513 GeneID:407228 KEGG:bta:407228
NextBio:20818478 Uniprot:F1MYD0
Length = 776
Score = 807 (289.1 bits), Expect = 2.2e-80, P = 2.2e-80
Identities = 195/565 (34%), Positives = 317/565 (56%)
Query: 7 YEKDFEEHMLQDTGAYYSRKASNWILEDSCPEYMIKAEECLKKERDRVSHYLHSSSEPKL 66
Y++ FE L DT +Y+R+++ ++ ++ EYM KAE L +E+ RV YLH S++ +L
Sbjct: 228 YKESFESQFLADTERFYTRESTEFLQQNPVTEYMKKAEARLLEEQRRVQVYLHESTQDEL 287
Query: 67 VEKVQHELLVVYATELLEKEQSGCRALLREDKVEDLSRMYRLYHKIPKGLEPVANVFKQH 126
K + ++L+ E+ E LL DK EDL RMY L +I GL + + + H
Sbjct: 288 ARKCE-QVLIEKHLEIFHTEFQN---LLDADKNEDLGRMYNLVSRIQDGLGELKKLLETH 343
Query: 127 ITAEGTVLVQQAEDAATNQGGSSGAVQEQVLIRKIIELHDKYMEYVTNCFINHTLFHKAL 186
I +G +++ +AA N ++ ++ ++++H KY V + F N F AL
Sbjct: 344 IHNQGLAAIEKCGEAALND--------PKMYVQTVLDVHKKYNALVMSAFNNDAGFVAAL 395
Query: 187 KEAFEIFCNK------AVGGSSSSELLATFCDNILKKGGNEKLSDEA-IEETLEKVVKLL 239
+A F N A S S ELLA +CD++LKK + K +EA +E+TL +V+ +
Sbjct: 396 DKACGRFINNNAVTKMAQSSSKSPELLARYCDSLLKK--SSKNPEEAELEDTLNQVMVVF 453
Query: 240 AYISDKDLFAEFYRKKLARRLLFDRSANDDHERSILTKLKQQCGGQFTSKMEGMVTDLTL 299
YI DKD+F +FY K LA+RL+ SA+DD E S+++KLKQ CG ++TSK++ M D+ +
Sbjct: 454 KYIEDKDVFQKFYAKMLAKRLVHQNSASDDAEASMISKLKQACGFEYTSKLQRMFQDIGV 513
Query: 300 ARENQTSFEEYLSNNQNAHPGIDLSVTVLTTGFWPSYKSSDLNLPSEMVKCVEVFKGFYE 359
+++ F+++L+N++ +D S+ VL++G WP +S LPSE+ + + F FY
Sbjct: 514 SKDLNEQFKKHLTNSEPLD--LDFSIQVLSSGSWPFQQSCTFALPSELERSYQRFTAFYA 571
Query: 360 TKTKHRKLTWIYSLGQCNINGKFEQKNIELIVSTYQAATLLLFNTSDRLSYSEIMTQLNL 419
++ RKLTW+Y L + + + L ST+Q A LL +NT D + ++ +
Sbjct: 572 SRHSGRKLTWLYQLSKGELVTNCFKNRYTLQASTFQMAILLQYNTEDAYAVQQLTDSTQI 631
Query: 420 THDDLVRLLHSLSCAKYKILLKE-PNTKTIS-QSDHF-EFNSKFTDRMRRIKIPLPPVDE 476
D L ++L L +K +L E N + + D + + ++ R+ I +P E
Sbjct: 632 KMDILAQVLQILLKSKLLVLEDENANVDEVELKPDTLIKLYLGYKNKKLRVNINVPMKTE 691
Query: 477 RKKIVE----DVDKDRRYAIDAALVRIMKSRKVLGHQQLVSECVEQLSRMFKPDIKAIKK 532
+K+ E ++++DR+ I AA+VRIMK RKVL HQQL+ E + QLS FKP + IKK
Sbjct: 692 QKQEQETTHKNIEEDRKLLIQAAIVRIMKMRKVLKHQQLLGEVLTQLSSRFKPRVPVIKK 751
Query: 533 RMEDLITRDYLERDKENPNMFRYLA 557
++ LI ++YLER + + YLA
Sbjct: 752 CIDILIEKEYLERVDGEKDTYSYLA 776
>UNIPROTKB|E2R1V2 [details] [associations]
symbol:CUL1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0031461 "cullin-RING ubiquitin ligase complex"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006511 SUPFAM:SSF75632
GO:GO:0031461 InterPro:IPR016159 SUPFAM:SSF74788
GeneTree:ENSGT00550000074299 KO:K03347 OMA:SGVINCY CTD:8454
EMBL:AAEX03010158 EMBL:AAEX03010159 RefSeq:XP_848402.1
ProteinModelPortal:E2R1V2 Ensembl:ENSCAFT00000005562 GeneID:475512
KEGG:cfa:475512 Uniprot:E2R1V2
Length = 776
Score = 807 (289.1 bits), Expect = 2.2e-80, P = 2.2e-80
Identities = 195/565 (34%), Positives = 317/565 (56%)
Query: 7 YEKDFEEHMLQDTGAYYSRKASNWILEDSCPEYMIKAEECLKKERDRVSHYLHSSSEPKL 66
Y++ FE L DT +Y+R+++ ++ ++ EYM KAE L +E+ RV YLH S++ +L
Sbjct: 228 YKESFESQFLADTERFYTRESTEFLQQNPVTEYMKKAEARLLEEQRRVQVYLHESTQDEL 287
Query: 67 VEKVQHELLVVYATELLEKEQSGCRALLREDKVEDLSRMYRLYHKIPKGLEPVANVFKQH 126
K + ++L+ E+ E LL DK EDL RMY L +I GL + + + H
Sbjct: 288 ARKCE-QVLIEKHLEIFHTEFQN---LLDADKNEDLGRMYNLVSRIQDGLGELKKLLETH 343
Query: 127 ITAEGTVLVQQAEDAATNQGGSSGAVQEQVLIRKIIELHDKYMEYVTNCFINHTLFHKAL 186
I +G +++ +AA N ++ ++ ++++H KY V + F N F AL
Sbjct: 344 IHNQGLAAIEKCGEAALND--------PKMYVQTVLDVHKKYNALVMSAFNNDAGFVAAL 395
Query: 187 KEAFEIFCNK------AVGGSSSSELLATFCDNILKKGGNEKLSDEA-IEETLEKVVKLL 239
+A F N A S S ELLA +CD++LKK + K +EA +E+TL +V+ +
Sbjct: 396 DKACGRFINNNAVTKMAQSSSKSPELLARYCDSLLKK--SSKNPEEAELEDTLNQVMVVF 453
Query: 240 AYISDKDLFAEFYRKKLARRLLFDRSANDDHERSILTKLKQQCGGQFTSKMEGMVTDLTL 299
YI DKD+F +FY K LA+RL+ SA+DD E S+++KLKQ CG ++TSK++ M D+ +
Sbjct: 454 KYIEDKDVFQKFYAKMLAKRLVHQNSASDDAEASMISKLKQACGFEYTSKLQRMFQDIGV 513
Query: 300 ARENQTSFEEYLSNNQNAHPGIDLSVTVLTTGFWPSYKSSDLNLPSEMVKCVEVFKGFYE 359
+++ F+++L+N++ +D S+ VL++G WP +S LPSE+ + + F FY
Sbjct: 514 SKDLNEQFKKHLTNSEPLD--LDFSIQVLSSGSWPFQQSCTFALPSELERSYQRFTAFYA 571
Query: 360 TKTKHRKLTWIYSLGQCNINGKFEQKNIELIVSTYQAATLLLFNTSDRLSYSEIMTQLNL 419
++ RKLTW+Y L + + + L ST+Q A LL +NT D + ++ +
Sbjct: 572 SRHSGRKLTWLYQLSKGELVTNCFKNRYTLQASTFQMAILLQYNTEDAYAVQQLTDSTQI 631
Query: 420 THDDLVRLLHSLSCAKYKILLKE-PNTKTIS-QSDHF-EFNSKFTDRMRRIKIPLPPVDE 476
D L ++L L +K +L E N + + D + + ++ R+ I +P E
Sbjct: 632 KMDILAQVLQILLKSKLLVLEDENANVDEVELKPDTLIKLYLGYKNKKLRVNINVPMKTE 691
Query: 477 RKKIVE----DVDKDRRYAIDAALVRIMKSRKVLGHQQLVSECVEQLSRMFKPDIKAIKK 532
+K+ E ++++DR+ I AA+VRIMK RKVL HQQL+ E + QLS FKP + IKK
Sbjct: 692 QKQEQETTHKNIEEDRKLLIQAAIVRIMKMRKVLKHQQLLGEVLTQLSSRFKPRVPVIKK 751
Query: 533 RMEDLITRDYLERDKENPNMFRYLA 557
++ LI ++YLER + + YLA
Sbjct: 752 CIDILIEKEYLERVDGEKDTYSYLA 776
>UNIPROTKB|Q13616 [details] [associations]
symbol:CUL1 "Cullin-1" species:9606 "Homo sapiens"
[GO:0031625 "ubiquitin protein ligase binding" evidence=IEA]
[GO:0019048 "virus-host interaction" evidence=IEA] [GO:0006513
"protein monoubiquitination" evidence=IEA] [GO:0008283 "cell
proliferation" evidence=IEA] [GO:0009887 "organ morphogenesis"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0031146 "SCF-dependent proteasomal ubiquitin-dependent protein
catabolic process" evidence=ISS;IDA] [GO:0019005 "SCF ubiquitin
ligase complex" evidence=ISS;IDA] [GO:0016567 "protein
ubiquitination" evidence=IDA] [GO:0007050 "cell cycle arrest"
evidence=TAS] [GO:0008285 "negative regulation of cell
proliferation" evidence=TAS] [GO:0097193 "intrinsic apoptotic
signaling pathway" evidence=TAS] [GO:0031461 "cullin-RING ubiquitin
ligase complex" evidence=IDA] [GO:0000080 "G1 phase of mitotic cell
cycle" evidence=TAS] [GO:0000082 "G1/S transition of mitotic cell
cycle" evidence=TAS] [GO:0000084 "S phase of mitotic cell cycle"
evidence=TAS] [GO:0000278 "mitotic cell cycle" evidence=TAS]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0005829 "cytosol"
evidence=TAS] [GO:0007219 "Notch signaling pathway" evidence=TAS]
[GO:0031145 "anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0051437 "positive regulation of ubiquitin-protein ligase
activity involved in mitotic cell cycle" evidence=TAS] [GO:0051439
"regulation of ubiquitin-protein ligase activity involved in
mitotic cell cycle" evidence=TAS] InterPro:IPR001373
InterPro:IPR016157 InterPro:IPR016158 InterPro:IPR019559
Pfam:PF00888 Pfam:PF10557 PROSITE:PS01256 PROSITE:PS50069
SMART:SM00182 SMART:SM00884 UniPathway:UPA00143 GO:GO:0005829
Reactome:REACT_111102 Reactome:REACT_6900 Reactome:REACT_115566
GO:GO:0019048 GO:GO:0008285 GO:GO:0005654 GO:GO:0000082
GO:GO:0008283 GO:GO:0007219 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0007050 GO:GO:0016567 GO:GO:0009887 GO:GO:0097193
GO:GO:0019005 GO:GO:0000084 eggNOG:COG5647 GO:GO:0031145
GO:GO:0051437 SUPFAM:SSF75632 EMBL:CH471146 GO:GO:0000080
Reactome:REACT_24941 GO:GO:0006513 InterPro:IPR016159
SUPFAM:SSF74788 PDB:1U6G PDBsum:1U6G GO:GO:0031146
HOGENOM:HOG000176713 KO:K03347 OMA:SGVINCY EMBL:U58087
EMBL:AF062536 EMBL:BX537409 EMBL:AC005229 EMBL:BC125119
EMBL:BC125120 IPI:IPI00014310 RefSeq:NP_003583.2 UniGene:Hs.146806
PDB:1LDJ PDB:1LDK PDB:3RTR PDB:3TDU PDB:3TDZ PDB:4F52 PDBsum:1LDJ
PDBsum:1LDK PDBsum:3RTR PDBsum:3TDU PDBsum:3TDZ PDBsum:4F52
ProteinModelPortal:Q13616 SMR:Q13616 DIP:DIP-17013N IntAct:Q13616
MINT:MINT-120495 STRING:Q13616 PhosphoSite:Q13616 DMDM:19863257
PaxDb:Q13616 PeptideAtlas:Q13616 PRIDE:Q13616 DNASU:8454
Ensembl:ENST00000325222 Ensembl:ENST00000409469 GeneID:8454
KEGG:hsa:8454 UCSC:uc003wey.3 CTD:8454 GeneCards:GC07P148395
HGNC:HGNC:2551 HPA:CAB002676 MIM:603134 neXtProt:NX_Q13616
PharmGKB:PA27047 HOVERGEN:HBG106177 InParanoid:Q13616
OrthoDB:EOG4WH8K4 PhylomeDB:Q13616 ChiTaRS:CUL1
EvolutionaryTrace:Q13616 GenomeRNAi:8454 NextBio:31638
ArrayExpress:Q13616 Bgee:Q13616 CleanEx:HS_CUL1
Genevestigator:Q13616 GermOnline:ENSG00000055130 Uniprot:Q13616
Length = 776
Score = 807 (289.1 bits), Expect = 2.2e-80, P = 2.2e-80
Identities = 195/565 (34%), Positives = 317/565 (56%)
Query: 7 YEKDFEEHMLQDTGAYYSRKASNWILEDSCPEYMIKAEECLKKERDRVSHYLHSSSEPKL 66
Y++ FE L DT +Y+R+++ ++ ++ EYM KAE L +E+ RV YLH S++ +L
Sbjct: 228 YKESFESQFLADTERFYTRESTEFLQQNPVTEYMKKAEARLLEEQRRVQVYLHESTQDEL 287
Query: 67 VEKVQHELLVVYATELLEKEQSGCRALLREDKVEDLSRMYRLYHKIPKGLEPVANVFKQH 126
K + ++L+ E+ E LL DK EDL RMY L +I GL + + + H
Sbjct: 288 ARKCE-QVLIEKHLEIFHTEFQN---LLDADKNEDLGRMYNLVSRIQDGLGELKKLLETH 343
Query: 127 ITAEGTVLVQQAEDAATNQGGSSGAVQEQVLIRKIIELHDKYMEYVTNCFINHTLFHKAL 186
I +G +++ +AA N ++ ++ ++++H KY V + F N F AL
Sbjct: 344 IHNQGLAAIEKCGEAALND--------PKMYVQTVLDVHKKYNALVMSAFNNDAGFVAAL 395
Query: 187 KEAFEIFCNK------AVGGSSSSELLATFCDNILKKGGNEKLSDEA-IEETLEKVVKLL 239
+A F N A S S ELLA +CD++LKK + K +EA +E+TL +V+ +
Sbjct: 396 DKACGRFINNNAVTKMAQSSSKSPELLARYCDSLLKK--SSKNPEEAELEDTLNQVMVVF 453
Query: 240 AYISDKDLFAEFYRKKLARRLLFDRSANDDHERSILTKLKQQCGGQFTSKMEGMVTDLTL 299
YI DKD+F +FY K LA+RL+ SA+DD E S+++KLKQ CG ++TSK++ M D+ +
Sbjct: 454 KYIEDKDVFQKFYAKMLAKRLVHQNSASDDAEASMISKLKQACGFEYTSKLQRMFQDIGV 513
Query: 300 ARENQTSFEEYLSNNQNAHPGIDLSVTVLTTGFWPSYKSSDLNLPSEMVKCVEVFKGFYE 359
+++ F+++L+N++ +D S+ VL++G WP +S LPSE+ + + F FY
Sbjct: 514 SKDLNEQFKKHLTNSEPLD--LDFSIQVLSSGSWPFQQSCTFALPSELERSYQRFTAFYA 571
Query: 360 TKTKHRKLTWIYSLGQCNINGKFEQKNIELIVSTYQAATLLLFNTSDRLSYSEIMTQLNL 419
++ RKLTW+Y L + + + L ST+Q A LL +NT D + ++ +
Sbjct: 572 SRHSGRKLTWLYQLSKGELVTNCFKNRYTLQASTFQMAILLQYNTEDAYTVQQLTDSTQI 631
Query: 420 THDDLVRLLHSLSCAKYKILLKE-PNTKTIS-QSDHF-EFNSKFTDRMRRIKIPLPPVDE 476
D L ++L L +K +L E N + + D + + ++ R+ I +P E
Sbjct: 632 KMDILAQVLQILLKSKLLVLEDENANVDEVELKPDTLIKLYLGYKNKKLRVNINVPMKTE 691
Query: 477 RKKIVE----DVDKDRRYAIDAALVRIMKSRKVLGHQQLVSECVEQLSRMFKPDIKAIKK 532
+K+ E ++++DR+ I AA+VRIMK RKVL HQQL+ E + QLS FKP + IKK
Sbjct: 692 QKQEQETTHKNIEEDRKLLIQAAIVRIMKMRKVLKHQQLLGEVLTQLSSRFKPRVPVIKK 751
Query: 533 RMEDLITRDYLERDKENPNMFRYLA 557
++ LI ++YLER + + YLA
Sbjct: 752 CIDILIEKEYLERVDGEKDTYSYLA 776
>UNIPROTKB|Q5R4G6 [details] [associations]
symbol:CUL1 "Cullin-1" species:9601 "Pongo abelii"
[GO:0019005 "SCF ubiquitin ligase complex" evidence=ISS]
[GO:0031146 "SCF-dependent proteasomal ubiquitin-dependent protein
catabolic process" evidence=ISS] InterPro:IPR001373
InterPro:IPR016157 InterPro:IPR016158 InterPro:IPR019559
Pfam:PF00888 Pfam:PF10557 PROSITE:PS01256 PROSITE:PS50069
SMART:SM00182 SMART:SM00884 UniPathway:UPA00143 GO:GO:0006915
GO:GO:0008283 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0009887
GO:GO:0019005 SUPFAM:SSF75632 GO:GO:0006513 InterPro:IPR016159
SUPFAM:SSF74788 GO:GO:0031146 GeneTree:ENSGT00550000074299
KO:K03347 OMA:SGVINCY CTD:8454 HOVERGEN:HBG106177 EMBL:CR861282
RefSeq:NP_001126972.1 UniGene:Pab.18495 ProteinModelPortal:Q5R4G6
SMR:Q5R4G6 PRIDE:Q5R4G6 Ensembl:ENSPPYT00000021153 GeneID:100173991
KEGG:pon:100173991 InParanoid:Q5R4G6 Uniprot:Q5R4G6
Length = 776
Score = 807 (289.1 bits), Expect = 2.2e-80, P = 2.2e-80
Identities = 195/565 (34%), Positives = 317/565 (56%)
Query: 7 YEKDFEEHMLQDTGAYYSRKASNWILEDSCPEYMIKAEECLKKERDRVSHYLHSSSEPKL 66
Y++ FE L DT +Y+R+++ ++ ++ EYM KAE L +E+ RV YLH S++ +L
Sbjct: 228 YKESFESQFLADTERFYTRESTEFLQQNPVTEYMKKAEARLLEEQRRVQVYLHESTQDEL 287
Query: 67 VEKVQHELLVVYATELLEKEQSGCRALLREDKVEDLSRMYRLYHKIPKGLEPVANVFKQH 126
K + ++L+ E+ E LL DK EDL RMY L +I GL + + + H
Sbjct: 288 ARKCE-QVLIEKHLEIFHTEFQN---LLDADKNEDLGRMYNLVSRIQDGLGELKKLLETH 343
Query: 127 ITAEGTVLVQQAEDAATNQGGSSGAVQEQVLIRKIIELHDKYMEYVTNCFINHTLFHKAL 186
I +G +++ +AA N ++ ++ ++++H KY V + F N F AL
Sbjct: 344 IHNQGLAAIEKCGEAALND--------PKMYVQTVLDVHKKYNALVMSAFNNDAGFVAAL 395
Query: 187 KEAFEIFCNK------AVGGSSSSELLATFCDNILKKGGNEKLSDEA-IEETLEKVVKLL 239
+A F N A S S ELLA +CD++LKK + K +EA +E+TL +V+ +
Sbjct: 396 DKACGRFINNNAVTKMAQSSSKSPELLARYCDSLLKK--SSKNPEEAELEDTLNQVMVVF 453
Query: 240 AYISDKDLFAEFYRKKLARRLLFDRSANDDHERSILTKLKQQCGGQFTSKMEGMVTDLTL 299
YI DKD+F +FY K LA+RL+ SA+DD E S+++KLKQ CG ++TSK++ M D+ +
Sbjct: 454 KYIEDKDVFQKFYAKMLAKRLVHQNSASDDAEASMISKLKQACGFEYTSKLQRMFQDIGV 513
Query: 300 ARENQTSFEEYLSNNQNAHPGIDLSVTVLTTGFWPSYKSSDLNLPSEMVKCVEVFKGFYE 359
+++ F+++L+N++ +D S+ VL++G WP +S LPSE+ + + F FY
Sbjct: 514 SKDLNEQFKKHLTNSEPLD--LDFSIQVLSSGSWPFQQSCTFALPSELERSYQRFTAFYA 571
Query: 360 TKTKHRKLTWIYSLGQCNINGKFEQKNIELIVSTYQAATLLLFNTSDRLSYSEIMTQLNL 419
++ RKLTW+Y L + + + L ST+Q A LL +NT D + ++ +
Sbjct: 572 SRHSGRKLTWLYQLSKGELVTNCFKNRYTLQASTFQMAILLQYNTEDAYTVQQLTDSTQI 631
Query: 420 THDDLVRLLHSLSCAKYKILLKE-PNTKTIS-QSDHF-EFNSKFTDRMRRIKIPLPPVDE 476
D L ++L L +K +L E N + + D + + ++ R+ I +P E
Sbjct: 632 KMDILAQVLQILLKSKLLVLEDENANVDEVELKPDTLIKLYLGYKNKKLRVNINVPMKTE 691
Query: 477 RKKIVE----DVDKDRRYAIDAALVRIMKSRKVLGHQQLVSECVEQLSRMFKPDIKAIKK 532
+K+ E ++++DR+ I AA+VRIMK RKVL HQQL+ E + QLS FKP + IKK
Sbjct: 692 QKQEQETTHKNIEEDRKLLIQAAIVRIMKMRKVLKHQQLLGEVLTQLSSRFKPRVPVIKK 751
Query: 533 RMEDLITRDYLERDKENPNMFRYLA 557
++ LI ++YLER + + YLA
Sbjct: 752 CIDILIEKEYLERVDGEKDTYSYLA 776
>MGI|MGI:1349658 [details] [associations]
symbol:Cul1 "cullin 1" species:10090 "Mus musculus"
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IC]
[GO:0005515 "protein binding" evidence=IPI] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IC]
[GO:0006513 "protein monoubiquitination" evidence=IGI] [GO:0006915
"apoptotic process" evidence=IMP] [GO:0008283 "cell proliferation"
evidence=IMP] [GO:0009887 "organ morphogenesis" evidence=IMP]
[GO:0016567 "protein ubiquitination" evidence=ISO;IC] [GO:0019005
"SCF ubiquitin ligase complex" evidence=ISO;IDA] [GO:0019048
"virus-host interaction" evidence=IEA] [GO:0031146 "SCF-dependent
proteasomal ubiquitin-dependent protein catabolic process"
evidence=ISO;IDA] [GO:0031461 "cullin-RING ubiquitin ligase
complex" evidence=ISO] [GO:0031625 "ubiquitin protein ligase
binding" evidence=IEA] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
UniPathway:UPA00143 MGI:MGI:1349658 GO:GO:0006915 GO:GO:0019048
GO:GO:0008283 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0009887
GO:GO:0019005 GO:GO:0004842 eggNOG:COG5647 SUPFAM:SSF75632
GO:GO:0006513 InterPro:IPR016159 SUPFAM:SSF74788 GO:GO:0031146
GeneTree:ENSGT00550000074299 HOGENOM:HOG000176713 KO:K03347
OMA:SGVINCY CTD:8454 HOVERGEN:HBG106177 OrthoDB:EOG4WH8K4
ChiTaRS:CUL1 EMBL:AF083216 EMBL:AF176910 EMBL:AF136441
EMBL:BC029260 IPI:IPI00124047 RefSeq:NP_036172.1 UniGene:Mm.87611
ProteinModelPortal:Q9WTX6 SMR:Q9WTX6 DIP:DIP-39799N IntAct:Q9WTX6
STRING:Q9WTX6 PhosphoSite:Q9WTX6 PaxDb:Q9WTX6 PRIDE:Q9WTX6
Ensembl:ENSMUST00000031697 GeneID:26965 KEGG:mmu:26965
UCSC:uc009bsz.1 InParanoid:Q9WTX6 NextBio:304903 Bgee:Q9WTX6
CleanEx:MM_CUL1 Genevestigator:Q9WTX6 GermOnline:ENSMUSG00000029686
Uniprot:Q9WTX6
Length = 776
Score = 807 (289.1 bits), Expect = 2.2e-80, P = 2.2e-80
Identities = 195/565 (34%), Positives = 317/565 (56%)
Query: 7 YEKDFEEHMLQDTGAYYSRKASNWILEDSCPEYMIKAEECLKKERDRVSHYLHSSSEPKL 66
Y++ FE L DT +Y+R+++ ++ ++ EYM KAE L +E+ RV YLH S++ +L
Sbjct: 228 YKESFESQFLADTERFYTRESTEFLQQNPVTEYMKKAEARLLEEQRRVQVYLHESTQDEL 287
Query: 67 VEKVQHELLVVYATELLEKEQSGCRALLREDKVEDLSRMYRLYHKIPKGLEPVANVFKQH 126
K + ++L+ E+ E LL DK EDL RMY L +I GL + + + H
Sbjct: 288 ARKCE-QVLIEKHLEIFHTEFQN---LLDADKNEDLGRMYNLVSRIQDGLGELKKLLETH 343
Query: 127 ITAEGTVLVQQAEDAATNQGGSSGAVQEQVLIRKIIELHDKYMEYVTNCFINHTLFHKAL 186
I +G +++ +AA N ++ ++ ++++H KY V + F N F AL
Sbjct: 344 IHNQGLAAIEKCGEAALND--------PKMYVQTVLDVHKKYNALVMSAFNNDAGFVAAL 395
Query: 187 KEAFEIFCNK------AVGGSSSSELLATFCDNILKKGGNEKLSDEA-IEETLEKVVKLL 239
+A F N A S S ELLA +CD++LKK + K +EA +E+TL +V+ +
Sbjct: 396 DKACGRFINNNAVTKMAQSSSKSPELLARYCDSLLKK--SSKNPEEAELEDTLNQVMVVF 453
Query: 240 AYISDKDLFAEFYRKKLARRLLFDRSANDDHERSILTKLKQQCGGQFTSKMEGMVTDLTL 299
YI DKD+F +FY K LA+RL+ SA+DD E S+++KLKQ CG ++TSK++ M D+ +
Sbjct: 454 KYIEDKDVFQKFYAKMLAKRLVHQNSASDDAEASMISKLKQACGFEYTSKLQRMFQDIGV 513
Query: 300 ARENQTSFEEYLSNNQNAHPGIDLSVTVLTTGFWPSYKSSDLNLPSEMVKCVEVFKGFYE 359
+++ F+++L+N++ +D S+ VL++G WP +S LPSE+ + + F FY
Sbjct: 514 SKDLNEQFKKHLTNSEPLD--LDFSIQVLSSGSWPFQQSCTFALPSELERSYQRFTAFYA 571
Query: 360 TKTKHRKLTWIYSLGQCNINGKFEQKNIELIVSTYQAATLLLFNTSDRLSYSEIMTQLNL 419
++ RKLTW+Y L + + + L ST+Q A LL +NT D + ++ +
Sbjct: 572 SRHSGRKLTWLYQLSKGELVTNCFKNRYTLQASTFQMAILLQYNTEDAYTVQQLTDSTQI 631
Query: 420 THDDLVRLLHSLSCAKYKILLKE-PNTKTIS-QSDHF-EFNSKFTDRMRRIKIPLPPVDE 476
D L ++L L +K +L E N + + D + + ++ R+ I +P E
Sbjct: 632 KMDILAQVLQILLKSKLLVLEDENANVDEVELKPDTLIKLYLGYKNKKLRVNINVPMKTE 691
Query: 477 RKKIVE----DVDKDRRYAIDAALVRIMKSRKVLGHQQLVSECVEQLSRMFKPDIKAIKK 532
+K+ E ++++DR+ I AA+VRIMK RKVL HQQL+ E + QLS FKP + IKK
Sbjct: 692 QKQEQETTHKNIEEDRKLLIQAAIVRIMKMRKVLKHQQLLGEVLTQLSSRFKPRVPVIKK 751
Query: 533 RMEDLITRDYLERDKENPNMFRYLA 557
++ LI ++YLER + + YLA
Sbjct: 752 CIDILIEKEYLERVDGEKDTYSYLA 776
>RGD|1308157 [details] [associations]
symbol:Cul1 "cullin 1" species:10116 "Rattus norvegicus"
[GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0006513 "protein
monoubiquitination" evidence=IEA;ISO] [GO:0006915 "apoptotic
process" evidence=IEA;ISO] [GO:0008150 "biological_process"
evidence=ND] [GO:0008283 "cell proliferation" evidence=IEA;ISO]
[GO:0009887 "organ morphogenesis" evidence=IEA;ISO] [GO:0016567
"protein ubiquitination" evidence=ISO] [GO:0019005 "SCF ubiquitin
ligase complex" evidence=IEA;ISO] [GO:0031146 "SCF-dependent
proteasomal ubiquitin-dependent protein catabolic process"
evidence=IEA;ISO] [GO:0031461 "cullin-RING ubiquitin ligase
complex" evidence=ISO] [GO:0031625 "ubiquitin protein ligase
binding" evidence=IEA] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
RGD:1308157 GO:GO:0006915 GO:GO:0008283 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0009887 GO:GO:0006511 GO:GO:0019005
EMBL:CH473959 eggNOG:COG5647 SUPFAM:SSF75632 GO:GO:0006513
InterPro:IPR016159 SUPFAM:SSF74788 GeneTree:ENSGT00550000074299
HOGENOM:HOG000176713 KO:K03347 OMA:SGVINCY CTD:8454
HOVERGEN:HBG106177 OrthoDB:EOG4WH8K4 EMBL:BC161932 IPI:IPI00358206
RefSeq:NP_001102097.1 UniGene:Rn.68078 SMR:B1WBY1 STRING:B1WBY1
Ensembl:ENSRNOT00000007620 GeneID:362356 KEGG:rno:362356
UCSC:RGD:1308157 NextBio:679624 Genevestigator:B1WBY1
Uniprot:B1WBY1
Length = 776
Score = 807 (289.1 bits), Expect = 2.2e-80, P = 2.2e-80
Identities = 195/565 (34%), Positives = 317/565 (56%)
Query: 7 YEKDFEEHMLQDTGAYYSRKASNWILEDSCPEYMIKAEECLKKERDRVSHYLHSSSEPKL 66
Y++ FE L DT +Y+R+++ ++ ++ EYM KAE L +E+ RV YLH S++ +L
Sbjct: 228 YKESFESQFLADTERFYTRESTEFLQQNPVTEYMKKAEARLLEEQRRVQVYLHESTQDEL 287
Query: 67 VEKVQHELLVVYATELLEKEQSGCRALLREDKVEDLSRMYRLYHKIPKGLEPVANVFKQH 126
K + ++L+ E+ E LL DK EDL RMY L +I GL + + + H
Sbjct: 288 ARKCE-QVLIEKHLEIFHTEFQN---LLDADKNEDLGRMYNLVSRIQDGLGELKKLLETH 343
Query: 127 ITAEGTVLVQQAEDAATNQGGSSGAVQEQVLIRKIIELHDKYMEYVTNCFINHTLFHKAL 186
I +G +++ +AA N ++ ++ ++++H KY V + F N F AL
Sbjct: 344 IHNQGLAAIEKCGEAALND--------PKMYVQTVLDVHKKYNALVMSAFNNDAGFVAAL 395
Query: 187 KEAFEIFCNK------AVGGSSSSELLATFCDNILKKGGNEKLSDEA-IEETLEKVVKLL 239
+A F N A S S ELLA +CD++LKK + K +EA +E+TL +V+ +
Sbjct: 396 DKACGRFINNNAVTKMAQSSSKSPELLARYCDSLLKK--SSKNPEEAELEDTLNQVMVVF 453
Query: 240 AYISDKDLFAEFYRKKLARRLLFDRSANDDHERSILTKLKQQCGGQFTSKMEGMVTDLTL 299
YI DKD+F +FY K LA+RL+ SA+DD E S+++KLKQ CG ++TSK++ M D+ +
Sbjct: 454 KYIEDKDVFQKFYAKMLAKRLVHQNSASDDAEASMISKLKQACGFEYTSKLQRMFQDIGV 513
Query: 300 ARENQTSFEEYLSNNQNAHPGIDLSVTVLTTGFWPSYKSSDLNLPSEMVKCVEVFKGFYE 359
+++ F+++L+N++ +D S+ VL++G WP +S LPSE+ + + F FY
Sbjct: 514 SKDLNEQFKKHLTNSEPLD--LDFSIQVLSSGSWPFQQSCTFALPSELERSYQRFTAFYA 571
Query: 360 TKTKHRKLTWIYSLGQCNINGKFEQKNIELIVSTYQAATLLLFNTSDRLSYSEIMTQLNL 419
++ RKLTW+Y L + + + L ST+Q A LL +NT D + ++ +
Sbjct: 572 SRHSGRKLTWLYQLSKGELVTNCFKNRYTLQASTFQMAILLQYNTEDAYTVQQLTDSTQI 631
Query: 420 THDDLVRLLHSLSCAKYKILLKE-PNTKTIS-QSDHF-EFNSKFTDRMRRIKIPLPPVDE 476
D L ++L L +K +L E N + + D + + ++ R+ I +P E
Sbjct: 632 KMDILAQVLQILLKSKLLVLEDENANVDEVELKPDTLIKLYLGYKNKKLRVNINVPMKTE 691
Query: 477 RKKIVE----DVDKDRRYAIDAALVRIMKSRKVLGHQQLVSECVEQLSRMFKPDIKAIKK 532
+K+ E ++++DR+ I AA+VRIMK RKVL HQQL+ E + QLS FKP + IKK
Sbjct: 692 QKQEQETTHKNIEEDRKLLIQAAIVRIMKMRKVLKHQQLLGEVLTQLSSRFKPRVPVIKK 751
Query: 533 RMEDLITRDYLERDKENPNMFRYLA 557
++ LI ++YLER + + YLA
Sbjct: 752 CIDILIEKEYLERVDGEKDTYSYLA 776
>ZFIN|ZDB-GENE-030131-2603 [details] [associations]
symbol:cul1a "cullin 1a" species:7955 "Danio
rerio" [GO:0031461 "cullin-RING ubiquitin ligase complex"
evidence=IEA] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
ZFIN:ZDB-GENE-030131-2603 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0006511 SUPFAM:SSF75632 GO:GO:0031461 InterPro:IPR016159
SUPFAM:SSF74788 HOVERGEN:HBG106177 HSSP:Q9JLV5 EMBL:BC045445
IPI:IPI00495948 UniGene:Dr.76883 ProteinModelPortal:Q7ZVR2
SMR:Q7ZVR2 STRING:Q7ZVR2 InParanoid:Q7ZVR2 ArrayExpress:Q7ZVR2
Uniprot:Q7ZVR2
Length = 777
Score = 801 (287.0 bits), Expect = 9.7e-80, P = 9.7e-80
Identities = 196/567 (34%), Positives = 320/567 (56%)
Query: 7 YEKDFEEHMLQDTGAYYSRKASNWILEDSCPEYMIKAEECLKKERDRVSHYLHSSSEPKL 66
Y++ FE L DT +Y+R+++ ++ ++ EYM KAE L +E+ RV YLH S++ +L
Sbjct: 229 YKEYFETQFLADTERFYTRESTEFLQQNPVTEYMKKAEARLLEEQRRVQVYLHESTQDEL 288
Query: 67 VEKVQHELLVVYATELLEKEQSGCRALLREDKVEDLSRMYRLYHKIPKGLEPVANVFKQH 126
K + ++L+ E+ E LL DK EDL RMY L +I GL + + + H
Sbjct: 289 ARKCE-QVLIEKHLEIFHTEFQN---LLDADKNEDLGRMYNLVSRITDGLGELKKLLETH 344
Query: 127 ITAEGTVLVQQAEDAATNQGGSSGAVQEQVLIRKIIELHDKYMEYVTNCFINHTLFHKAL 186
I +G +++ ++A N ++ ++ I+++H KY V + F N F AL
Sbjct: 345 IYNQGLAAIEKCGESALND--------PKMYVQTILDVHKKYNALVMSAFNNDAGFVAAL 396
Query: 187 KEAFEIFCN-----KAVGGSSSS-ELLATFCDNILKKGGNEKLSDEA-IEETLEKVVKLL 239
+A F N K V SS S ELLA +CD++LKK + K +EA +E+TL +V+ +
Sbjct: 397 DKACGRFINNNAVTKMVQSSSKSPELLARYCDSLLKK--SSKNPEEAELEDTLNQVMVVF 454
Query: 240 AYISDKDLFAEFYRKKLARRLLFDRSANDDHERSILTKLKQQCGGQFTSKMEGMVTDLTL 299
YI DKD+F +FY K LA+RL+ SA+DD E S+++KLKQ CG ++TSK++ M D+ +
Sbjct: 455 KYIEDKDVFQKFYAKMLAKRLVHQNSASDDAEASMISKLKQACGFEYTSKLQRMFQDIGV 514
Query: 300 ARENQTSFEEYLSNNQNAHPGIDLSVTVLTTGFWPSYKSSDLNLPSEMVKCVEVFKGFYE 359
+++ F+++L+N++ +D S+ VL++G WP +S LPSE+ + + F FY
Sbjct: 515 SKDLNEQFKKHLTNSEPLD--LDFSIQVLSSGSWPFQQSCTFALPSELERSYQRFTAFYA 572
Query: 360 TKTKHRKLTWIYSLGQCNINGKFEQKNIELIVSTYQAATLLLFNTSDRLSYSEIMTQLNL 419
++ RKLTW+Y L + + + L ST+Q A LL +NT D + ++ +
Sbjct: 573 SRHSGRKLTWLYHLSKGELVTNCFKNRYTLQASTFQMAILLQYNTEDVYTVQQLTDSTQI 632
Query: 420 THDDLVRLLHSLSCAKYKILLKEPNTKTISQSDH-----FEFNSKFTDRMRRIKIPLPPV 474
D LV++L L K K+L+ E + + + + + ++ R+ I +P
Sbjct: 633 KIDILVQVLQIL--LKSKLLVLEDENANVDEVEFKPDTLIKLFLGYKNKKLRVNINVPMK 690
Query: 475 DERKKIVE----DVDKDRRYAIDAALVRIMKSRKVLGHQQLVSECVEQLSRMFKPDIKAI 530
E+K+ E ++++DR+ I AA+VR MK RKVL HQQL++E + QLS FKP + I
Sbjct: 691 TEQKQEQETTHKNIEEDRKLLIQAAIVRTMKMRKVLKHQQLLAEVLNQLSSRFKPRVPVI 750
Query: 531 KKRMEDLITRDYLERDKENPNMFRYLA 557
KK ++ LI ++YLER + + YLA
Sbjct: 751 KKCIDILIEKEYLERVDGEKDTYSYLA 777
>UNIPROTKB|F1SAD7 [details] [associations]
symbol:CUL1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0031146 "SCF-dependent proteasomal ubiquitin-dependent
protein catabolic process" evidence=IEA] [GO:0019005 "SCF ubiquitin
ligase complex" evidence=IEA] [GO:0009887 "organ morphogenesis"
evidence=IEA] [GO:0008283 "cell proliferation" evidence=IEA]
[GO:0006915 "apoptotic process" evidence=IEA] [GO:0006513 "protein
monoubiquitination" evidence=IEA] [GO:0031625 "ubiquitin protein
ligase binding" evidence=IEA] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
GO:GO:0006915 GO:GO:0008283 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0009887 GO:GO:0006511 GO:GO:0019005 SUPFAM:SSF75632
GO:GO:0006513 InterPro:IPR016159 SUPFAM:SSF74788
GeneTree:ENSGT00550000074299 OMA:SGVINCY EMBL:CU915471
EMBL:FP565440 Ensembl:ENSSSCT00000016837 Uniprot:F1SAD7
Length = 778
Score = 793 (284.2 bits), Expect = 6.8e-79, P = 6.8e-79
Identities = 194/566 (34%), Positives = 316/566 (55%)
Query: 7 YEKDFEEHMLQDTGAYYSRKASNWILEDSCPEYMIKAEECLKKERDRVSHYLHSSSEPKL 66
Y++ FE L DT +Y+R+++ ++ ++ EYM KAE L +E+ RV YLH S++ +L
Sbjct: 228 YKESFESQFLADTERFYTRESTEFLQQNPVTEYMKKAEARLLEEQRRVQVYLHESTQDEL 287
Query: 67 VEKVQHELLVVYATELLEKEQSGCRALLREDKVEDLSRMYRLYHKIPKGLEPVANVFKQH 126
K + ++L+ E+ E LL DK EDL RMY L +I GL + + + H
Sbjct: 288 ARKCE-QVLIEKHLEIFHTEFQN---LLDADKNEDLGRMYNLVSRIQDGLGELKKLLETH 343
Query: 127 ITAEGTVLVQQAEDAATNQGGSSGAVQEQVLIRKIIELHDKYMEYVTNCFINHTLFHKAL 186
I +G +++ +AA N ++ ++ ++++H KY V + F N F AL
Sbjct: 344 IHNQGLAAIEKCGEAALND--------PKMYVQTVLDVHKKYNALVMSAFNNDAGFVAAL 395
Query: 187 KEAFEIFCNK------AVGGSSSSELLATFCDNILKKGGNEKLSDEA-IEETLEKVVKLL 239
+A F N A S S ELLA +CD++LKK + K +EA +E+TL +V+ +
Sbjct: 396 DKACGRFINNNAVTKMAQSSSKSPELLARYCDSLLKK--SSKNPEEAELEDTLNQVMVVF 453
Query: 240 AYISDKDLFAEFYRKKLARRLLFDRSANDDHERSILT-KLKQQCGGQFTSKMEGMVTDLT 298
YI DKD+F +FY K LA+ L+ SA+DD E S+++ KLKQ CG ++TSK++ M D+
Sbjct: 454 KYIEDKDVFQKFYAKMLAK-LVHQNSASDDAEASMISNKLKQACGFEYTSKLQRMFQDIG 512
Query: 299 LARENQTSFEEYLSNNQNAHPGIDLSVTVLTTGFWPSYKSSDLNLPSEMVKCVEVFKGFY 358
++++ F+++L+N++ +D S+ VL++G WP +S LPSE+ + + F FY
Sbjct: 513 VSKDLNEQFKKHLTNSEPLDSPVDFSIQVLSSGSWPFQQSCTFALPSELERSYQRFTAFY 572
Query: 359 ETKTKHRKLTWIYSLGQCNINGKFEQKNIELIVSTYQAATLLLFNTSDRLSYSEIMTQLN 418
++ RKLTW+Y L + + + L ST+Q A LL +NT D + ++
Sbjct: 573 ASRHSGRKLTWLYQLSKGELVTNCFKNRYTLQASTFQMAILLQYNTEDAYAVQQLTDSTQ 632
Query: 419 LTHDDLVRLLHSLSCAKYKILLKE-PNTKTIS-QSDHF-EFNSKFTDRMRRIKIPLPPVD 475
+ D L ++L L +K +L E N + + D + + ++ R+ I +P
Sbjct: 633 IKMDILAQVLQILLKSKLLVLEDENANVDEVELKPDTLIKLYLGYKNKKLRVNINVPMKT 692
Query: 476 ERKKIVE----DVDKDRRYAIDAALVRIMKSRKVLGHQQLVSECVEQLSRMFKPDIKAIK 531
E+K+ E ++++DR+ I AA+VRIMK RKVL HQQL+ E + QLS FKP + IK
Sbjct: 693 EQKQEQETTHKNIEEDRKLLIQAAIVRIMKMRKVLKHQQLLGEVLTQLSSRFKPRVPVIK 752
Query: 532 KRMEDLITRDYLERDKENPNMFRYLA 557
K ++ LI ++YLER + + YLA
Sbjct: 753 KCIDILIEKEYLERVDGEKDTYSYLA 778
>RGD|1564494 [details] [associations]
symbol:Cul4b "cullin 4B" species:10116 "Rattus norvegicus"
[GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005886 "plasma membrane" evidence=ISO]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
[GO:0031461 "cullin-RING ubiquitin ligase complex" evidence=IEA]
[GO:0031465 "Cul4B-RING ubiquitin ligase complex" evidence=ISO]
[GO:0031625 "ubiquitin protein ligase binding" evidence=IEA]
[GO:0045732 "positive regulation of protein catabolic process"
evidence=ISO] [GO:0045750 "positive regulation of S phase of
mitotic cell cycle" evidence=ISO] [GO:0005730 "nucleolus"
evidence=ISO] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
RGD:1564494 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006511
SUPFAM:SSF75632 GO:GO:0031461 InterPro:IPR016159 SUPFAM:SSF74788
IPI:IPI00362333 PRIDE:D3ZNZ7 Ensembl:ENSRNOT00000003523
UCSC:RGD:1564494 ArrayExpress:D3ZNZ7 Uniprot:D3ZNZ7
Length = 754
Score = 517 (187.1 bits), Expect = 1.0e-78, Sum P(2) = 1.0e-78
Identities = 113/253 (44%), Positives = 148/253 (58%)
Query: 309 EYLSNNQNAHPGIDLSVTVLTTGFWPSYKSSDLNLPSEMVKCVEVFKGFYETKTKHRKLT 368
EY+ N QN I+L+V +LT G+WP+Y +++LP EMVK E+FK FY K RKL
Sbjct: 505 EYMQN-QNVPGNIELTVNILTMGYWPTYVPMEVHLPPEMVKLQEIFKTFYLGKHSGRKLQ 563
Query: 369 WIYSLGQCNINGKFEQKNIELIVSTYQAATLLLFNTSDRLSYSEIMTQLNLTHDDLVRLL 428
W +LG C + +F++ EL VS +Q LL+FN + S EI + +L R L
Sbjct: 564 WQSTLGHCVLKAEFKEGKKELQVSLFQTLVLLMFNEGEEFSLEEIKQATGIEDGELRRTL 623
Query: 429 HSLSCAKYKILLKEPNTKTISQSDHFEFNSKFTDRMRRIKIPL----PPVDERKKIVEDV 484
SL+C K ++L K P K I D F N F ++ RIKI V+E+ E V
Sbjct: 624 QSLACGKARVLAKNPKGKDIEDGDKFICNDDFKHKLFRIKINQIQMKETVEEQASTTERV 683
Query: 485 DKDRRYAIDAALVRIMKSRKVLGHQQLVSECVEQLSRMFKPDIKAIKKRMEDLITRDYLE 544
+DR+Y IDAA+VRIMK RK L H LVSE QL KP +KKR+E LI RDY+E
Sbjct: 684 FQDRQYQIDAAIVRIMKMRKTLSHNLLVSEVYNQLKFPVKP--ADLKKRIESLIDRDYME 741
Query: 545 RDKENPNMFRYLA 557
RDKENPN + Y+A
Sbjct: 742 RDKENPNQYNYIA 754
Score = 297 (109.6 bits), Expect = 1.0e-78, Sum P(2) = 1.0e-78
Identities = 81/283 (28%), Positives = 156/283 (55%)
Query: 14 HMLQDTGAYYSRKASNWILEDSCPEYMIKAEECLKKERDRVSHYLHSSSE------PKLV 67
+ML D Y + L+++ Y + ++ L +ER+ V YLH ++ +L+
Sbjct: 242 NMLSDLQIYQDSFEQRF-LQETNRLYAAEGQK-LMQERE-VPEYLHHVNKRLEEEADRLI 298
Query: 68 ----EKVQHELLVVYATELLEKE-----QSGCRALLREDKVEDLSRMYRLYHKIPKGLEP 118
+ Q L+ +LL + Q G +LL E++++DLS +Y+L+ ++ G++
Sbjct: 299 TYLDQTTQKSLIASVEKQLLGEHLTAILQKGLNSLLDENRIQDLSLLYQLFSRVRGGVQV 358
Query: 119 VANVFKQHITAEGTVLVQQAEDAATNQGGSSGAVQEQVLIRKIIELHDKYMEYVTNCFIN 178
+ + ++I A G+ +V E +++ +++++++ DK + CF+
Sbjct: 359 LLQHWIEYIKAFGSTIVINPE-------------KDKTMVQELLDFKDKVDHIIDTCFLK 405
Query: 179 HTLFHKALKEAFEIFCNKAVGGSSSSELLATFCDNILKKGGNEKLSDEAIEETLEKVVKL 238
+ F A+KEAFE F NK + +EL+A + D+ L+ GN++ +DE +E+ L+K++ +
Sbjct: 406 NEKFINAMKEAFETFINKRP--NKPAELIAKYVDSKLR-AGNKEATDEELEKMLDKIMII 462
Query: 239 LAYISDKDLFAEFYRKKLARRLLFDRSANDDHERSILTKLKQQ 281
+I KD+F FY+K LA+RLL +SA+ D E+S+L+KLK +
Sbjct: 463 FRFIYGKDVFEAFYKKDLAKRLLVGKSASVDAEKSMLSKLKHE 505
Score = 244 (91.0 bits), Expect = 3.9e-73, Sum P(2) = 3.9e-73
Identities = 53/196 (27%), Positives = 107/196 (54%)
Query: 1 MGQMDSYEKDFEEHMLQDTGAYYSRKASNWILEDSCPEYMIKAEECLKKERDRVSHYLHS 60
+ + Y+ FE+ LQ+T Y+ + + E PEY+ + L++E DR+ YL
Sbjct: 244 LSDLQIYQDSFEQRFLQETNRLYAAEGQKLMQEREVPEYLHHVNKRLEEEADRLITYLDQ 303
Query: 61 SSEPKLVEKVQHELLVVYATELLEKEQSGCRALLREDKVEDLSRMYRLYHKIPKGLEPVA 120
+++ L+ V+ +LL + T +L+K G +LL E++++DLS +Y+L+ ++ G++ +
Sbjct: 304 TTQKSLIASVEKQLLGEHLTAILQK---GLNSLLDENRIQDLSLLYQLFSRVRGGVQVLL 360
Query: 121 NVFKQHITAEGTVLVQQAEDAATNQGGSSGAVQEQVLIRKIIELHDKYMEYVTNCFINHT 180
+ ++I A G+ +V E +++ +++++++ DK + CF+ +
Sbjct: 361 QHWIEYIKAFGSTIVINPE-------------KDKTMVQELLDFKDKVDHIIDTCFLKNE 407
Query: 181 LFHKALKEAFEIFCNK 196
F A+KEAFE F NK
Sbjct: 408 KFINAMKEAFETFINK 423
>POMBASE|SPAC24H6.03 [details] [associations]
symbol:cul3 "cullin 3" species:4896 "Schizosaccharomyces
pombe" [GO:0005829 "cytosol" evidence=IDA] [GO:0007346 "regulation
of mitotic cell cycle" evidence=IC] [GO:0019005 "SCF ubiquitin
ligase complex" evidence=ISS] [GO:0031625 "ubiquitin protein ligase
binding" evidence=IEA] [GO:0042787 "protein ubiquitination involved
in ubiquitin-dependent protein catabolic process" evidence=IC]
InterPro:IPR001373 InterPro:IPR016157 InterPro:IPR016158
InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557 PROSITE:PS01256
PROSITE:PS50069 SMART:SM00182 SMART:SM00884 UniPathway:UPA00143
PomBase:SPAC24H6.03 GO:GO:0005829 GO:GO:0007346 EMBL:CU329670
GenomeReviews:CU329670_GR Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0019005 eggNOG:COG5647 SUPFAM:SSF75632 GO:GO:0042787
InterPro:IPR016159 SUPFAM:SSF74788 HOGENOM:HOG000176712 KO:K03869
EMBL:AB017028 PIR:S62405 PIR:T38359 PIR:T43406 RefSeq:NP_592949.1
ProteinModelPortal:Q09760 IntAct:Q09760 STRING:Q09760
EnsemblFungi:SPAC24H6.03.1 GeneID:2542637 KEGG:spo:SPAC24H6.03
OMA:DEFRQHI OrthoDB:EOG48H0BR NextBio:20803686 Uniprot:Q09760
Length = 785
Score = 780 (279.6 bits), Expect = 1.6e-77, P = 1.6e-77
Identities = 186/569 (32%), Positives = 308/569 (54%)
Query: 7 YEKDFEEHMLQDTGAYYSRKASNWILEDSCPEYMIKAEECLKKERDRVSHYLHSSSEPKL 66
Y+ F L T +Y ++S I EY+ KAE+ ++E++R +YL + L
Sbjct: 224 YDVLFAPKFLSYTRNFYEIESSTVIGVFGVVEYLKKAEKRFEEEKERSKNYLFTKIASPL 283
Query: 67 VEKVQHELLVVYATELLEKEQSGCRALLREDKVEDLSRMYRLYHKIPKGLEPVANVFKQH 126
+ V+ ELL + +LLE + +G +++ E L +Y + ++ G++ + ++
Sbjct: 284 LSVVEDELLSKHLDDLLENQSTGFFSMIDSSNFEGLQLVYESFSRVELGVKSLKKYLAKY 343
Query: 127 ITAEGTVL---VQQAEDAATNQGG-SSGAVQEQVLIRKIIELHDKYMEYVTNCFINHTLF 182
+ G ++ QA + G SS A + ++K++ L D+ ++
Sbjct: 344 VAHHGKLINETTSQALEGKMAVGRLSSNATMATLWVQKVLALWDRLNTIISTTMDADRSI 403
Query: 183 HKALKEAFEIFCNKAVGGSSSSELLATFCDNILKKGGNEKLSDEAIEETLEKVVKLLAYI 242
+L +AF F + G + + E ++ F D+ LKK + + + +IE TL+ V L +I
Sbjct: 404 LNSLSDAFVTFVD---GYTRAPEYISLFIDDNLKKDARKAI-EGSIEATLQNSVTLFRFI 459
Query: 243 SDKDLFAEFYRKKLARRLLFDRSANDDHERSILTKLKQQCGGQFTSKMEGMVTDLTLARE 302
S+KD+F ++Y+ LA+RLL +RS + D E ++++LKQ+ G FT K+EGM D+ L++E
Sbjct: 460 SEKDVFEKYYKTHLAKRLLNNRSISSDAELGMISRLKQEAGNVFTQKLEGMFNDMNLSQE 519
Query: 303 NQTSFEEYLSNN--QNAHPGIDLSVTVLTTGFWP---SYKSSDLNLPSEMVKCVEVFKGF 357
+EY N+ Q+A P +DL+V++L + FWP S N P ++ ++ F F
Sbjct: 520 ---LLQEYKHNSALQSAKPALDLNVSILASTFWPIDLSPHKIKCNFPKVLLAQIDQFTDF 576
Query: 358 YETKTKHRKLTWIYSLGQCNINGKFEQKNIELIVSTYQAATLLLFNT---SDRLSYSEIM 414
Y +K RKL W S+G ++ F+ + +L VST + LLLF + L + EI+
Sbjct: 577 YLSKHTGRKLLWYPSMGSADVRVNFKDRKYDLNVSTIASVILLLFQDLKENQCLIFEEIL 636
Query: 415 TQLNLTHDDLVRLLHSLSCAKYKILLKEPNTKTISQSDHFEFNSKFTDRMRRIKIP---- 470
+ N+ DL R L SL+CAKYKILLK+P + ++ D F FN F + RIKI
Sbjct: 637 EKTNIEVGDLKRNLQSLACAKYKILLKDPKGREVNAGDKFYFNENFVSNLARIKISTVAQ 696
Query: 471 --LPPVDERKKIVEDVDKDRRYAIDAALVRIMKSRKVLGHQQLVSECVEQLSRMFKPDIK 528
+ ERK+ +E VD+ R++ DA +VR+MK RKV H QL++E QL+ F P
Sbjct: 697 TRVEDDSERKRTLEKVDESRKHQADACIVRVMKDRKVCEHNQLMAEVTRQLNPRFHPSPM 756
Query: 529 AIKKRMEDLITRDYLERDKENPNMFRYLA 557
IK+R+E LI R+YL+R +N ++ YLA
Sbjct: 757 MIKRRIEALIEREYLQRQADNGRIYEYLA 785
>TAIR|locus:2205020 [details] [associations]
symbol:CUL3B "AT1G69670" species:3702 "Arabidopsis
thaliana" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA;TAS]
[GO:0031461 "cullin-RING ubiquitin ligase complex" evidence=IEA]
[GO:0031625 "ubiquitin protein ligase binding" evidence=IEA]
[GO:0000151 "ubiquitin ligase complex" evidence=TAS] [GO:0005515
"protein binding" evidence=IPI] [GO:0019005 "SCF ubiquitin ligase
complex" evidence=IPI] [GO:0009793 "embryo development ending in
seed dormancy" evidence=IGI;RCA] [GO:0009960 "endosperm
development" evidence=IGI] [GO:0000911 "cytokinesis by cell plate
formation" evidence=RCA] [GO:0007062 "sister chromatid cohesion"
evidence=RCA] [GO:0007155 "cell adhesion" evidence=RCA] [GO:0009880
"embryonic pattern specification" evidence=RCA] [GO:0010072
"primary shoot apical meristem specification" evidence=RCA]
[GO:0010090 "trichome morphogenesis" evidence=RCA] [GO:0010228
"vegetative to reproductive phase transition of meristem"
evidence=RCA] [GO:0010413 "glucuronoxylan metabolic process"
evidence=RCA] [GO:0010431 "seed maturation" evidence=RCA]
[GO:0045010 "actin nucleation" evidence=RCA] [GO:0045492 "xylan
biosynthetic process" evidence=RCA] [GO:0045595 "regulation of cell
differentiation" evidence=RCA] [GO:0048765 "root hair cell
differentiation" evidence=RCA] [GO:0051301 "cell division"
evidence=RCA] [GO:0071555 "cell wall organization" evidence=RCA]
InterPro:IPR001373 InterPro:IPR016158 InterPro:IPR019559
Pfam:PF00888 Pfam:PF10557 PROSITE:PS01256 PROSITE:PS50069
SMART:SM00182 SMART:SM00884 UniPathway:UPA00143 EMBL:CP002684
GenomeReviews:CT485782_GR Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0009793 GO:GO:0016567 GO:GO:0006511 GO:GO:0009960
eggNOG:COG5647 SUPFAM:SSF75632 GO:GO:0031461 EMBL:AC013289
InterPro:IPR016159 SUPFAM:SSF74788 HOGENOM:HOG000176712 HSSP:Q9JLV5
KO:K03869 ProtClustDB:CLSN2912776 EMBL:AJ344541 IPI:IPI00529547
PIR:E96718 RefSeq:NP_177125.3 UniGene:At.35390
ProteinModelPortal:Q9C9L0 SMR:Q9C9L0 IntAct:Q9C9L0 STRING:Q9C9L0
PRIDE:Q9C9L0 EnsemblPlants:AT1G69670.1 GeneID:843303
KEGG:ath:AT1G69670 TAIR:At1g69670 InParanoid:Q9C9L0 OMA:REMIANH
PhylomeDB:Q9C9L0 Genevestigator:Q9C9L0 Uniprot:Q9C9L0
Length = 732
Score = 770 (276.1 bits), Expect = 1.9e-76, P = 1.9e-76
Identities = 194/561 (34%), Positives = 311/561 (55%)
Query: 7 YEKDFEEHMLQDTGAYYSRKASNWILEDSCPEYMIKAEECLKKERDRVSHYLHSSSEPKL 66
Y+ DFE+ L+ + +Y ++ +I C EY+ KAE+ L +E +RV +YL + SE K+
Sbjct: 192 YQDDFEKPFLEASAEFYKVESMEFIESCDCGEYLKKAEKPLVEEVERVVNYLDAKSEAKI 251
Query: 67 VEKVQHELLVVYATELLEKEQSGCRALLREDKVEDLSRMYRLYHKIPKGLEPVANVFKQH 126
V+ E++ + L+ E SG +L DK ED+ RMY L+ ++ GL V +V H
Sbjct: 252 TSVVEREMIANHVQRLVHMENSGLVNMLLNDKYEDMGRMYSLFRRVANGLVTVRDVMTLH 311
Query: 127 ITAEGTVLVQQAEDAATNQGGSSGAVQEQVLIRKIIELHDKYMEYVTNCFINHTLFHKAL 186
+ G LV E S V+ ++++++ DKY + F N F AL
Sbjct: 312 LREMGKQLVTDPEK-------SKDPVE---FVQRLLDERDKYDRIINMAFNNDKTFQNAL 361
Query: 187 KEAFEIFCNKAVGGSSSSELLATFCDNILKKGGNEKLSDEAIEETLEKVVKLLAYISDKD 246
+FE F N + S E ++ F D+ L+KG + + +E ++ L+KV+ L Y+ +KD
Sbjct: 362 NSSFEYFVNL---NTRSPEFISLFVDDKLRKG-LKGVGEEDVDLILDKVMMLFRYLQEKD 417
Query: 247 LFAEFYRKKLARRLLFDRSANDDHERSILTKLKQQCGGQFTSKMEGMVTDLTLARENQTS 306
+F ++Y++ LA+RLL ++ +DD ER+++ KLK +CG QFTSK+EGM TD+ + +
Sbjct: 418 VFEKYYKQHLAKRLLSGKTVSDDAERNLIVKLKTECGYQFTSKLEGMFTDMKTSHDTLLG 477
Query: 307 FEEYLSNNQNAH-PGIDLSV-TVLTTGFWPSYKSSDLNLPSEMVKCVEVFKGFYETKTKH 364
F Y S+ + + P + + V T + P+ + + L ++ C + + T T
Sbjct: 478 F--YNSHPELSEGPTLVVQVLTTGSWPTQPTIQCN-LPAEVSVL-CEKFRSYYLGTHTGR 533
Query: 365 RKL--TWIYSLGQCNINGKFEQKNIELIVSTYQAATLLLFNTSDRLSYSEIMTQLNLTHD 422
R T + + + GK QK+ EL VST+Q L+LFN SDRLSY EI +
Sbjct: 534 RLSWQTNMGTADIKAVFGK-GQKH-ELNVSTFQMCVLMLFNNSDRLSYKEIEQATEIPTP 591
Query: 423 DLVRLLHSLSCAKYK-ILLKEPNTKTISQSDHFEFNSKFTDRMRRIKIPLPPVD-----E 476
DL R L S++C K K +L KEP +K I++ D F N +F + ++KI E
Sbjct: 592 DLKRCLQSMACVKGKNVLRKEPMSKEIAEEDWFVVNDRFASKFYKVKIGTVVAQKETEPE 651
Query: 477 RKKIVEDVDKDRRYAIDAALVRIMKSRKVLGHQQLVSECVEQLSRMFKPDIKAIKKRMED 536
+++ + V++DR+ I+AA+VRIMKSR+VL H +++E +QL F + IKKR+E
Sbjct: 652 KQETRQRVEEDRKPQIEAAIVRIMKSRRVLDHNNIIAEVTKQLQTRFLANPTEIKKRIES 711
Query: 537 LITRDYLERDKENPNMFRYLA 557
LI RD+LERD + ++RYLA
Sbjct: 712 LIERDFLERDNTDRKLYRYLA 732
>DICTYBASE|DDB_G0292794 [details] [associations]
symbol:culD "cullin D" species:44689 "Dictyostelium
discoideum" [GO:0005634 "nucleus" evidence=IDA] [GO:0031625
"ubiquitin protein ligase binding" evidence=IEA] [GO:0031461
"cullin-RING ubiquitin ligase complex" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA]
InterPro:IPR001373 InterPro:IPR016157 InterPro:IPR016158
InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557 PROSITE:PS01256
PROSITE:PS50069 SMART:SM00182 SMART:SM00884 UniPathway:UPA00143
dictyBase:DDB_G0292794 GO:GO:0005634 GenomeReviews:CM000155_GR
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0016567 GO:GO:0006511
eggNOG:COG5647 SUPFAM:SSF75632 GO:GO:0031461 EMBL:AAFI02000196
InterPro:IPR016159 SUPFAM:SSF74788 KO:K10609 HSSP:Q9JLV5
OMA:FEDSLDF RefSeq:XP_629469.1 ProteinModelPortal:Q54CS2 SMR:Q54CS2
STRING:Q54CS2 EnsemblProtists:DDB0266743 GeneID:8628859
KEGG:ddi:DDB_G0292794 ProtClustDB:CLSZ2429365 Uniprot:Q54CS2
Length = 802
Score = 437 (158.9 bits), Expect = 8.1e-76, Sum P(3) = 8.1e-76
Identities = 105/309 (33%), Positives = 170/309 (55%)
Query: 153 QEQVLIRKIIELHDKYMEYVTNCFINHTLFHKALKEAFEIFCNKAVGGSSSSELLATFCD 212
+E LI+ +++ D+ ++ F + L ALKE+FE F N + +EL+A F D
Sbjct: 366 KEATLIQDLLDYKDRLDRILSQSFSKNELLTYALKESFEYFINTKQ--NKPAELVARFID 423
Query: 213 NILKKGGNEKLSDEAIEETLEKVVKLLAYISDKDLFAEFYRKKLARRLLFDRSANDDHER 272
+ LK GG +++S+E +E L K + L YI KD+F FY++ L++RLL D+S + D E+
Sbjct: 424 SKLKVGG-KRMSEEELETVLNKSLILFRYIQGKDVFEAFYKQDLSKRLLLDKSTSIDAEK 482
Query: 273 SILTKLKQQCGGQFTSKMEGMVTDLTLARENQTSFEEYLSNNQNAHPGIDLSVTVLTTGF 332
S+++KLK +CG FT+K+E M D+ L+ + SF + QN I++++ VLT+G
Sbjct: 483 SMISKLKTECGTTFTAKLEEMFKDIELSNDIMNSFRDS-PMTQN-FKSIEMNIYVLTSGN 540
Query: 333 WPSYKSSDLNLPSEMVKCVEVFKGFYETKTKHRKLTWIYSLGQCNINGKFEQKNIELIVS 392
WP + LP E ++ EVF FY +K + L W +L C + F Q EL VS
Sbjct: 541 WPIQPPIEATLPKEFLEYQEVFNKFYLSKHNGKTLKWQNALSYCVLKANFIQGKKELSVS 600
Query: 393 TYQAATLLLFNT---SDRLSYSEIMTQLNLTHDDLVRLLHSLSCAKYKILLKEPNTKTIS 449
+Q L LFN LS+ +I L +L + L SL +K IL+++ ++ + +
Sbjct: 601 LFQTIILYLFNDVIDGGELSFRDIQANTGLAIPELKKNLLSLCSSKSDILIQKKSSTSSN 660
Query: 450 QSDHFEFNS 458
S + N+
Sbjct: 661 TSSNTSSNT 669
Score = 235 (87.8 bits), Expect = 8.1e-76, Sum P(3) = 8.1e-76
Identities = 52/117 (44%), Positives = 76/117 (64%)
Query: 445 TKTISQSDHFEFNSKFTDRMRRIKIPL----PPVDERKKIVEDVDKDRRYAIDAALVRIM 500
TK I ++D F FNSKF+ ++ +IK+ V+E +K E++ DR+Y +DAA+VRIM
Sbjct: 688 TKVIDETDTFLFNSKFSSKLFKIKVNSIQIQETVEENQKTNENIISDRQYQVDAAIVRIM 747
Query: 501 KSRKVLGHQQLVSECVEQLSRMFKPDIKAIKKRMEDLITRDYLERDKENPNMFRYLA 557
K+RK L H L+SE V L F+P +KKR+E LI ++YL RD EN ++ Y+A
Sbjct: 748 KTRKTLAHNLLISELVSLLK--FQPKPVDLKKRIEILIEKEYLCRDPENAMIYNYMA 802
Score = 146 (56.5 bits), Expect = 8.1e-76, Sum P(3) = 8.1e-76
Identities = 35/143 (24%), Positives = 76/143 (53%)
Query: 1 MGQMDSYEKDFEEHMLQDTGAYYSRKASNWILEDSCPEYMIKAEECLKKERDRVSHYLHS 60
+ ++ Y K FE +++T +Y + ++ I E P Y+ E L +E +R+ YL
Sbjct: 232 LSSLNIYTK-FEIEFIKETNRFYDMEGNSKINEIETPMYLKYVCERLNQEGERLMRYLEQ 290
Query: 61 SSEPKLVEKVQHELLVVYATELLEKEQSGCRALLREDKVEDLSRMYRLYHKIPKGLEPVA 120
S++ +L+ + +L+ + +LEK G A++ D++EDL ++Y+L + + + ++ +
Sbjct: 291 STKKQLMAVLDRQLIERHVDVILEK---GFNAMVNGDRLEDLGKLYQLLNSVGE-IKKIK 346
Query: 121 NVFKQHITAEGTVLVQQAEDAAT 143
++ +I G ++ E AT
Sbjct: 347 ESWQSYIKQTGIQMLNDKEKEAT 369
Score = 52 (23.4 bits), Expect = 9.2e-17, Sum P(2) = 9.2e-17
Identities = 38/161 (23%), Positives = 69/161 (42%)
Query: 160 KIIELHDK-YMEYVTNCFINHTLFHKALKEAFEIFCNKAVGGSSSSELLATFCDNILKKG 218
KI E+ Y++YV +N + L E K + +L+ D IL+KG
Sbjct: 260 KINEIETPMYLKYVCER-LNQE--GERLMRYLEQSTKKQLMAVLDRQLIERHVDVILEKG 316
Query: 219 GNEKLSDEAIEETLEKVVKLLAYISDKDLFAEF---YRKKLARRLLFDRSANDDHERSIL 275
N ++ + +E+ L K+ +LL + + E Y K+ ++L D+ + +L
Sbjct: 317 FNAMVNGDRLED-LGKLYQLLNSVGEIKKIKESWQSYIKQTGIQMLNDKEKEATLIQDLL 375
Query: 276 TKLKQQCGGQFTSKMEGMVTDLTLARENQTSFEEYLSNNQN 316
K + + S+ LT A + SFE +++ QN
Sbjct: 376 D-YKDRLD-RILSQSFSKNELLTYALKE--SFEYFINTKQN 412
Score = 41 (19.5 bits), Expect = 1.3e-15, Sum P(2) = 1.3e-15
Identities = 20/83 (24%), Positives = 34/83 (40%)
Query: 201 SSSSELLATFCDNILKKGGNEKLSDEAIEETLEKVVKLLAYISDKDLFAEFYRKKLARRL 260
S S L D++L E+ DE + + +VK+L+ ++ F + K+ R
Sbjct: 194 SQQSNLERKTIDSLLYSIRCEREGDEIDRDLIHSLVKMLSSLNIYTKFEIEFIKETNR-- 251
Query: 261 LFDRSANDD-HERSILTKLKQQC 282
+D N +E LK C
Sbjct: 252 FYDMEGNSKINEIETPMYLKYVC 274
>DICTYBASE|DDB_G0267384 [details] [associations]
symbol:culB "cullin B" species:44689 "Dictyostelium
discoideum" [GO:0031286 "negative regulation of sorocarp stalk cell
differentiation" evidence=IGI;IMP] [GO:0031625 "ubiquitin protein
ligase binding" evidence=IEA] [GO:0031461 "cullin-RING ubiquitin
ligase complex" evidence=IEA] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=IEA] [GO:0007275 "multicellular
organismal development" evidence=IEA] [GO:0016567 "protein
ubiquitination" evidence=IEA] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
UniPathway:UPA00143 dictyBase:DDB_G0267384 GO:GO:0007275
GenomeReviews:CM000150_GR EMBL:AAFI02000003 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0016567 GO:GO:0006511 GO:GO:0031286
eggNOG:COG5647 SUPFAM:SSF75632 GO:GO:0031461 InterPro:IPR016159
SUPFAM:SSF74788 HSSP:Q13616 ProtClustDB:CLSZ2429454 EMBL:AF144717
RefSeq:XP_647212.1 ProteinModelPortal:Q9XZJ3 STRING:Q9XZJ3
EnsemblProtists:DDB0191260 GeneID:8616016 KEGG:ddi:DDB_G0267384
OMA:SECINYL Uniprot:Q9XZJ3
Length = 771
Score = 602 (217.0 bits), Expect = 3.7e-74, Sum P(2) = 3.7e-74
Identities = 144/467 (30%), Positives = 253/467 (54%)
Query: 3 QMDSYEKD-------FEEHMLQDTGAYYSRKASNWILEDSCPEYMIKAEECLKKERDRVS 55
++DS +KD +E L++T +Y+R++ +I YM KAE + +E R
Sbjct: 183 KLDSVDKDRTLYLIEYEASYLENTRQFYTRESVAFIASSGISSYMKKAETRIDEEEQRSQ 242
Query: 56 HYLHSSSEPKLVEKVQHELLVVYATELLEKEQSGCRALLREDKVEDLSRMYRLYHKIPKG 115
YL+SSS K+ ++ H +L+ ELL+ E C L+++K++++ MY+L +I G
Sbjct: 243 KYLNSSSHDKM-RRLLHSILIEKHKELLQSE---CINYLKDEKLDEIYNMYKLLSRIEGG 298
Query: 116 LEPVANVFKQHITAEGTVLVQQAEDAATNQGGSSGAVQEQVLIRKIIELHDKYMEYVTNC 175
L PV +++I G ++ D N ++ + +++++ ++ +
Sbjct: 299 LAPVLETVQKYIQHVGIDAIKSIPDR-NNP-------DPKIYVETLLKIYLQFSSIIKKS 350
Query: 176 FINHTLFHKALKEA-FEIFCNKAV--GGSSSSELLATFCDNILKKGGNEKLSDEAIEETL 232
F N F L A +IF + + S ELLA +CD +LKKG N++ + +EE L
Sbjct: 351 FNNDVSFITVLDLACHKIFNQNHITRNTTKSPELLAKYCDMLLKKG-NKQHEEIELEEKL 409
Query: 233 EKVVKLLAYISDKDLFAEFYRKKLARRLLFDRSANDDHERSILTKLKQQCGGQFTSKMEG 292
+++ L Y+ DKD+F +FY K L+RRL+ S +DD E+ ++T LKQ CG ++TSK +
Sbjct: 410 GQIIVLFKYVDDKDVFQKFYSKMLSRRLINGTSVSDDIEKFMITGLKQACGFEYTSKFQR 469
Query: 293 MVTDLTLARENQTSFEEYLSNNQNAHPGIDLSVTVLTTGFWPSY-KSSDLNLPSEMVKCV 351
M D+TL+ E F+ +L N + ID S+ VLT+G W + ++S +P E+ C+
Sbjct: 470 MFNDITLSAETNEEFKNHLIKNSLSIGKIDFSILVLTSGSWSLHSQTSSFIVPQELTLCI 529
Query: 352 EVFKGFYETKTKHRKLTWIYSLGQCNINGKFEQKNIELIVSTYQAATLLLFNTSDRLSYS 411
F+ +Y T+ + RKL W++ L + F +K+ + V+ +Q LL+FNT + +S
Sbjct: 530 SAFQQYYSTQHQGRKLNWLHHLCKAEAKSFFAKKSYDFQVTNFQLGILLIFNTQESVSLE 589
Query: 412 EIMTQLNLTHDDLVRLLHSLSCAKYKILLKEPNTKTISQSDHFEFNS 458
EI NL ++L R L SL AK ++ K+ + +I+ +++ N+
Sbjct: 590 EITKFTNLNENELSRTLQSLIEAKI-LISKKKDQNSINNNNNNNNNN 635
Score = 165 (63.1 bits), Expect = 3.7e-74, Sum P(2) = 3.7e-74
Identities = 34/120 (28%), Positives = 69/120 (57%)
Query: 442 EPNTKTISQSDHFEFNSKFTDRMRRIKIPLPPVDE----RKKIVEDVDKDRRYAIDAALV 497
+P++ + S + + NS ++++ ++K+ E ++ + +D+DR+ + A++V
Sbjct: 653 QPSSSS-SSTQEYTVNSAYSNKRSKVKVSSSLQKETPLQNEETYKGIDEDRKLYLQASIV 711
Query: 498 RIMKSRKVLGHQQLVSECVEQLSRMFKPDIKAIKKRMEDLITRDYLERDKENPNMFRYLA 557
RIMK+RK + H L+ E +E F+P+I IKK +E LI ++Y+ R + + + Y A
Sbjct: 712 RIMKARKTMNHVSLIQEVIEHSRLRFQPNIPMIKKCIEQLIEKEYITRAEGESDRYLYAA 771
Score = 38 (18.4 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
Identities = 11/40 (27%), Positives = 20/40 (50%)
Query: 211 CDNIL--KKGGNEKLSDEAIEETLEKVVKLLAYISDKDLF 248
C IL K E + + I + +E ++KL + D+ L+
Sbjct: 155 CVEILIQKDRDGELVQHQFISQFMESLIKLDSVDKDRTLY 194
>UNIPROTKB|E2QRU7 [details] [associations]
symbol:CUL2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0031462 "Cul2-RING ubiquitin ligase complex"
evidence=IEA] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006511 SUPFAM:SSF75632
GO:GO:0031462 InterPro:IPR016159 SUPFAM:SSF74788
GeneTree:ENSGT00550000074299 KO:K03870 OMA:VMLDYVE CTD:8453
EMBL:AAEX03001145 RefSeq:XP_535140.2 Ensembl:ENSCAFT00000005971
GeneID:477952 KEGG:cfa:477952 NextBio:20853352 Uniprot:E2QRU7
Length = 745
Score = 747 (268.0 bits), Expect = 5.1e-74, P = 5.1e-74
Identities = 175/560 (31%), Positives = 285/560 (50%)
Query: 7 YEKDFEEHMLQDTGAYYSRKASNWILEDSCPEYMIKAEECLKKERDRVSHYLHSSSEPKL 66
Y++ FE L +TG YY ++ASN + E +C +YM K LK E R YLH SS K+
Sbjct: 203 YQEIFESPFLTETGEYYKQEASNLLQESNCSQYMEKVLGRLKDEEIRCRKYLHPSSYTKV 262
Query: 67 VEKVQHELLVVYATELLEKEQSGCRALLREDKVEDLSRMYRLYHKIPKGLEPVANVFKQH 126
+ + Q ++ + + L E C ++R++K D++ MY L + GL + + H
Sbjct: 263 IHECQQRMVADHL-QFLHAE---CHNIIRQEKKNDMANMYVLLRAVSTGLPHMIQELQNH 318
Query: 127 ITAEGTVLVQQAEDAATNQGGSSGAVQEQVLIRKIIELHDKYMEYVTNCFINHTLFHKAL 186
I EG +A T + + + ++E+H K+++ + F AL
Sbjct: 319 IQDEGL----RATSNLTQEN------MPTLFVESVLEVHGKFVQLINTVLNGDQHFMSAL 368
Query: 187 KEAFEIFCNKAVGGS--SSSELLATFCDNILKKGGNEKLSDEAIEETLEKVVKLLAYISD 244
+A N S + ELLA +CDN+LKK + +++ +E+ L + + YI D
Sbjct: 369 DKALTSVVNYREPKSVCKAPELLAKYCDNLLKKSA-KGMTENEVEDKLTSFITVFKYIDD 427
Query: 245 KDLFAEFYRKKLARRLLFDRSANDDHERSILTKLKQQCGGQFTSKMEGMVTDLTLARENQ 304
KD+F +FY + LA+RL+ S + D E +++ KLKQ CG +FTSK+ M TD++++ +
Sbjct: 428 KDVFQKFYARMLAKRLIHGLSMSMDSEEAMINKLKQACGYEFTSKLHRMYTDMSVSADLN 487
Query: 305 TSFEEYLSNNQNAHP-GIDLSVTVLTTGFWPSYK--SSDLNLPSEMVKCVEVFKGFYETK 361
F ++ N GI + VL G WP + SS +P E+ K V++F+ FY
Sbjct: 488 NKFNNFIKNQDTVIDLGISFQIYVLQAGAWPLTQAPSSTFAIPQELEKSVQMFELFYSQH 547
Query: 362 TKHRKLTWIYSLGQCNINGKFEQKNIELIVSTYQAATLLLFNTSDRLSYSEIMTQLNLTH 421
RKLTW++ L + + K +V+TYQ A LL FN S+ +SY E+ +
Sbjct: 548 FSGRKLTWLHYLCTGEVKMNYLGKPYVAMVTTYQMAVLLAFNNSETVSYKELQDSTQMNE 607
Query: 422 DDLVRLLHSLSCAKYKILLKEPNTKTISQSDHFEFNSKFTDRMRRIKIPLPPVDERKKIV 481
+L + + SL K++ + + I F N F+ + + KI + + +
Sbjct: 608 KELTKTIKSL--LDVKMINHDSEKEDIDTESSFSLNMNFSSKRTKFKITTSMQKDTPQEM 665
Query: 482 ED----VDKDRRYAIDAALVRIMKSRKVLGHQQLVSECVEQLSRMFKPDIKAIKKRMEDL 537
E VD+DR+ + AA+VRIMK+RKVL H L+ E + Q F P I IKK +E L
Sbjct: 666 EQTRSAVDEDRKMYLQAAIVRIMKARKVLRHNALIQEVISQSRARFNPSISMIKKCIEVL 725
Query: 538 ITRDYLERDKENPNMFRYLA 557
I + Y+ER + + + + Y+A
Sbjct: 726 IDKQYIERSQASADEYSYVA 745
>UNIPROTKB|Q13617 [details] [associations]
symbol:CUL2 "Cullin-2" species:9606 "Homo sapiens"
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0019048 "virus-host interaction" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA] [GO:0005515
"protein binding" evidence=IPI] [GO:0031625 "ubiquitin protein
ligase binding" evidence=IDA] [GO:0031462 "Cul2-RING ubiquitin
ligase complex" evidence=IDA] [GO:0000082 "G1/S transition of
mitotic cell cycle" evidence=TAS] [GO:0008285 "negative regulation
of cell proliferation" evidence=TAS] [GO:0097193 "intrinsic
apoptotic signaling pathway" evidence=TAS] [GO:0007050 "cell cycle
arrest" evidence=TAS] [GO:0005654 "nucleoplasm" evidence=TAS]
[GO:0005829 "cytosol" evidence=TAS] [GO:0033554 "cellular response
to stress" evidence=TAS] [GO:0061418 "regulation of transcription
from RNA polymerase II promoter in response to hypoxia"
evidence=TAS] [GO:0071456 "cellular response to hypoxia"
evidence=TAS] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
UniPathway:UPA00143 Reactome:REACT_120956 GO:GO:0005829
Reactome:REACT_6900 GO:GO:0019048 GO:GO:0008285 GO:GO:0005654
GO:GO:0000082 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0007050
GO:GO:0016567 EMBL:CH471072 GO:GO:0006511 GO:GO:0097193
eggNOG:COG5647 SUPFAM:SSF75632 Pathway_Interaction_DB:hif1apathway
GO:GO:0061418 GO:GO:0031462 GO:GO:0031625 InterPro:IPR016159
SUPFAM:SSF74788 HOVERGEN:HBG106177 KO:K03870 OMA:VMLDYVE
EMBL:U83410 EMBL:AF126404 EMBL:AK095217 EMBL:AK300491 EMBL:AL392046
EMBL:BC009591 EMBL:BC110901 EMBL:U58088 IPI:IPI00014311
IPI:IPI00985090 RefSeq:NP_001185706.1 RefSeq:NP_001185707.1
RefSeq:NP_001185708.1 RefSeq:NP_003582.2 UniGene:Hs.82919
ProteinModelPortal:Q13617 SMR:Q13617 DIP:DIP-31612N IntAct:Q13617
MINT:MINT-1523339 STRING:Q13617 PhosphoSite:Q13617 DMDM:19863260
PaxDb:Q13617 PRIDE:Q13617 DNASU:8453 Ensembl:ENST00000374748
Ensembl:ENST00000374749 Ensembl:ENST00000374751
Ensembl:ENST00000537177 GeneID:8453 KEGG:hsa:8453 UCSC:uc001ixv.3
CTD:8453 GeneCards:GC10M035338 HGNC:HGNC:2552 HPA:CAB002677
HPA:HPA024578 MIM:603135 neXtProt:NX_Q13617 PharmGKB:PA27048
InParanoid:Q13617 OrthoDB:EOG4Z0B51 PhylomeDB:Q13617 ChiTaRS:CUL2
GenomeRNAi:8453 NextBio:31634 ArrayExpress:Q13617 Bgee:Q13617
CleanEx:HS_CUL2 Genevestigator:Q13617 GermOnline:ENSG00000108094
Uniprot:Q13617
Length = 745
Score = 746 (267.7 bits), Expect = 6.5e-74, P = 6.5e-74
Identities = 175/560 (31%), Positives = 285/560 (50%)
Query: 7 YEKDFEEHMLQDTGAYYSRKASNWILEDSCPEYMIKAEECLKKERDRVSHYLHSSSEPKL 66
Y++ FE L +TG YY ++ASN + E +C +YM K LK E R YLH SS K+
Sbjct: 203 YQEIFESPFLTETGEYYKQEASNLLQESNCSQYMEKVLGRLKDEEIRCRKYLHPSSYTKV 262
Query: 67 VEKVQHELLVVYATELLEKEQSGCRALLREDKVEDLSRMYRLYHKIPKGLEPVANVFKQH 126
+ + Q ++ + + L E C ++R++K D++ MY L + GL + + H
Sbjct: 263 IHECQQRMVADHL-QFLHAE---CHNIIRQEKKNDMANMYVLLRAVSTGLPHMIQELQNH 318
Query: 127 ITAEGTVLVQQAEDAATNQGGSSGAVQEQVLIRKIIELHDKYMEYVTNCFINHTLFHKAL 186
I EG +A T + + + ++E+H K+++ + F AL
Sbjct: 319 IHDEGL----RATSNLTQEN------MPTLFVESVLEVHGKFVQLINTVLNGDQHFMSAL 368
Query: 187 KEAFEIFCNKAVGGS--SSSELLATFCDNILKKGGNEKLSDEAIEETLEKVVKLLAYISD 244
+A N S + ELLA +CDN+LKK + +++ +E+ L + + YI D
Sbjct: 369 DKALTSVVNYREPKSVCKAPELLAKYCDNLLKKSA-KGMTENEVEDRLTSFITVFKYIDD 427
Query: 245 KDLFAEFYRKKLARRLLFDRSANDDHERSILTKLKQQCGGQFTSKMEGMVTDLTLARENQ 304
KD+F +FY + LA+RL+ S + D E +++ KLKQ CG +FTSK+ M TD++++ +
Sbjct: 428 KDVFQKFYARMLAKRLIHGLSMSMDSEEAMINKLKQACGYEFTSKLHRMYTDMSVSADLN 487
Query: 305 TSFEEYLSNNQNAHP-GIDLSVTVLTTGFWPSYK--SSDLNLPSEMVKCVEVFKGFYETK 361
F ++ N GI + VL G WP + SS +P E+ K V++F+ FY
Sbjct: 488 NKFNNFIKNQDTVIDLGISFQIYVLQAGAWPLTQAPSSTFAIPQELEKSVQMFELFYSQH 547
Query: 362 TKHRKLTWIYSLGQCNINGKFEQKNIELIVSTYQAATLLLFNTSDRLSYSEIMTQLNLTH 421
RKLTW++ L + + K +V+TYQ A LL FN S+ +SY E+ +
Sbjct: 548 FSGRKLTWLHYLCTGEVKMNYLGKPYVAMVTTYQMAVLLAFNNSETVSYKELQDSTQMNE 607
Query: 422 DDLVRLLHSLSCAKYKILLKEPNTKTISQSDHFEFNSKFTDRMRRIKIPLPPVDERKKIV 481
+L + + SL K++ + + I F N F+ + + KI + + +
Sbjct: 608 KELTKTIKSL--LDVKMINHDSEKEDIDAESSFSLNMNFSSKRTKFKITTSMQKDTPQEM 665
Query: 482 ED----VDKDRRYAIDAALVRIMKSRKVLGHQQLVSECVEQLSRMFKPDIKAIKKRMEDL 537
E VD+DR+ + AA+VRIMK+RKVL H L+ E + Q F P I IKK +E L
Sbjct: 666 EQTRSAVDEDRKMYLQAAIVRIMKARKVLRHNALIQEVISQSRARFNPSISMIKKCIEVL 725
Query: 538 ITRDYLERDKENPNMFRYLA 557
I + Y+ER + + + + Y+A
Sbjct: 726 IDKQYIERSQASADEYSYVA 745
>UNIPROTKB|Q5T2B7 [details] [associations]
symbol:CUL2 "Cullin-2" species:9606 "Homo sapiens"
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0031461 "cullin-RING ubiquitin ligase complex"
evidence=IEA] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006511 SUPFAM:SSF75632
GO:GO:0031461 InterPro:IPR016159 SUPFAM:SSF74788
HOGENOM:HOG000176713 HOVERGEN:HBG106177 EMBL:AL392046
UniGene:Hs.82919 HGNC:HGNC:2552 ChiTaRS:CUL2 IPI:IPI00647073
SMR:Q5T2B7 Ensembl:ENST00000374754 Uniprot:Q5T2B7
Length = 688
Score = 746 (267.7 bits), Expect = 6.5e-74, P = 6.5e-74
Identities = 175/560 (31%), Positives = 285/560 (50%)
Query: 7 YEKDFEEHMLQDTGAYYSRKASNWILEDSCPEYMIKAEECLKKERDRVSHYLHSSSEPKL 66
Y++ FE L +TG YY ++ASN + E +C +YM K LK E R YLH SS K+
Sbjct: 146 YQEIFESPFLTETGEYYKQEASNLLQESNCSQYMEKVLGRLKDEEIRCRKYLHPSSYTKV 205
Query: 67 VEKVQHELLVVYATELLEKEQSGCRALLREDKVEDLSRMYRLYHKIPKGLEPVANVFKQH 126
+ + Q ++ + + L E C ++R++K D++ MY L + GL + + H
Sbjct: 206 IHECQQRMVADHL-QFLHAE---CHNIIRQEKKNDMANMYVLLRAVSTGLPHMIQELQNH 261
Query: 127 ITAEGTVLVQQAEDAATNQGGSSGAVQEQVLIRKIIELHDKYMEYVTNCFINHTLFHKAL 186
I EG +A T + + + ++E+H K+++ + F AL
Sbjct: 262 IHDEGL----RATSNLTQEN------MPTLFVESVLEVHGKFVQLINTVLNGDQHFMSAL 311
Query: 187 KEAFEIFCNKAVGGS--SSSELLATFCDNILKKGGNEKLSDEAIEETLEKVVKLLAYISD 244
+A N S + ELLA +CDN+LKK + +++ +E+ L + + YI D
Sbjct: 312 DKALTSVVNYREPKSVCKAPELLAKYCDNLLKKSA-KGMTENEVEDRLTSFITVFKYIDD 370
Query: 245 KDLFAEFYRKKLARRLLFDRSANDDHERSILTKLKQQCGGQFTSKMEGMVTDLTLARENQ 304
KD+F +FY + LA+RL+ S + D E +++ KLKQ CG +FTSK+ M TD++++ +
Sbjct: 371 KDVFQKFYARMLAKRLIHGLSMSMDSEEAMINKLKQACGYEFTSKLHRMYTDMSVSADLN 430
Query: 305 TSFEEYLSNNQNAHP-GIDLSVTVLTTGFWPSYK--SSDLNLPSEMVKCVEVFKGFYETK 361
F ++ N GI + VL G WP + SS +P E+ K V++F+ FY
Sbjct: 431 NKFNNFIKNQDTVIDLGISFQIYVLQAGAWPLTQAPSSTFAIPQELEKSVQMFELFYSQH 490
Query: 362 TKHRKLTWIYSLGQCNINGKFEQKNIELIVSTYQAATLLLFNTSDRLSYSEIMTQLNLTH 421
RKLTW++ L + + K +V+TYQ A LL FN S+ +SY E+ +
Sbjct: 491 FSGRKLTWLHYLCTGEVKMNYLGKPYVAMVTTYQMAVLLAFNNSETVSYKELQDSTQMNE 550
Query: 422 DDLVRLLHSLSCAKYKILLKEPNTKTISQSDHFEFNSKFTDRMRRIKIPLPPVDERKKIV 481
+L + + SL K++ + + I F N F+ + + KI + + +
Sbjct: 551 KELTKTIKSL--LDVKMINHDSEKEDIDAESSFSLNMNFSSKRTKFKITTSMQKDTPQEM 608
Query: 482 ED----VDKDRRYAIDAALVRIMKSRKVLGHQQLVSECVEQLSRMFKPDIKAIKKRMEDL 537
E VD+DR+ + AA+VRIMK+RKVL H L+ E + Q F P I IKK +E L
Sbjct: 609 EQTRSAVDEDRKMYLQAAIVRIMKARKVLRHNALIQEVISQSRARFNPSISMIKKCIEVL 668
Query: 538 ITRDYLERDKENPNMFRYLA 557
I + Y+ER + + + + Y+A
Sbjct: 669 IDKQYIERSQASADEYSYVA 688
>UNIPROTKB|Q08DE9 [details] [associations]
symbol:CUL2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0031462 "Cul2-RING ubiquitin ligase complex"
evidence=IEA] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006511 eggNOG:COG5647
SUPFAM:SSF75632 GO:GO:0031462 InterPro:IPR016159 SUPFAM:SSF74788
GeneTree:ENSGT00550000074299 HOGENOM:HOG000176713
HOVERGEN:HBG106177 KO:K03870 OMA:VMLDYVE CTD:8453 OrthoDB:EOG4Z0B51
EMBL:DAAA02035372 EMBL:BC123787 EMBL:BC150023 IPI:IPI00704669
RefSeq:NP_001070377.1 UniGene:Bt.38802 STRING:Q08DE9
Ensembl:ENSBTAT00000055001 GeneID:535219 KEGG:bta:535219
InParanoid:Q08DE9 NextBio:20876664 Uniprot:Q08DE9
Length = 745
Score = 745 (267.3 bits), Expect = 8.4e-74, P = 8.4e-74
Identities = 175/560 (31%), Positives = 285/560 (50%)
Query: 7 YEKDFEEHMLQDTGAYYSRKASNWILEDSCPEYMIKAEECLKKERDRVSHYLHSSSEPKL 66
Y++ FE L +TG YY ++ASN + E +C +YM K LK E R YLH SS K+
Sbjct: 203 YQEIFESPFLTETGEYYKQEASNLLQESNCSQYMEKVLGRLKDEEIRCRKYLHPSSYTKV 262
Query: 67 VEKVQHELLVVYATELLEKEQSGCRALLREDKVEDLSRMYRLYHKIPKGLEPVANVFKQH 126
+ + Q ++ + + L E C ++R++K D++ MY L + GL + + H
Sbjct: 263 IHECQQRMVADHL-QFLHAE---CHNIIRQEKKNDMANMYVLLRAVSTGLPHMIQELQNH 318
Query: 127 ITAEGTVLVQQAEDAATNQGGSSGAVQEQVLIRKIIELHDKYMEYVTNCFINHTLFHKAL 186
I EG +A T + + + ++E+H K+++ + F AL
Sbjct: 319 IHDEGL----RATSNLTQEN------MPTLFVESVLEVHGKFVQLINTVLNGDQHFMSAL 368
Query: 187 KEAFEIFCNKAVGGS--SSSELLATFCDNILKKGGNEKLSDEAIEETLEKVVKLLAYISD 244
+A N S + ELLA +CDN+LKK + +++ +E+ L + + YI D
Sbjct: 369 DKALTSVVNYREPKSVCKAPELLAKYCDNLLKKSA-KGMTENEVEDKLTSFITVFKYIDD 427
Query: 245 KDLFAEFYRKKLARRLLFDRSANDDHERSILTKLKQQCGGQFTSKMEGMVTDLTLARENQ 304
KD+F +FY + LA+RL+ S + D E +++ KLKQ CG +FTSK+ M TD++++ +
Sbjct: 428 KDVFQKFYARMLAKRLIHGLSMSMDSEEAMINKLKQACGYEFTSKLHRMYTDMSVSADLN 487
Query: 305 TSFEEYLSNNQNAHP-GIDLSVTVLTTGFWPSYK--SSDLNLPSEMVKCVEVFKGFYETK 361
F ++ N GI + VL G WP + SS +P E+ K V++F+ FY
Sbjct: 488 NKFNNFIKNQDTVIDLGISFQIYVLQAGAWPLTQAPSSTFAIPQELEKSVQMFELFYSQH 547
Query: 362 TKHRKLTWIYSLGQCNINGKFEQKNIELIVSTYQAATLLLFNTSDRLSYSEIMTQLNLTH 421
RKLTW++ L + + K +V+TYQ A LL FN S+ +SY E+ +
Sbjct: 548 FSGRKLTWLHYLCTGEVKMNYLGKPYVAMVTTYQMAVLLAFNNSETVSYKELQDSTQMNE 607
Query: 422 DDLVRLLHSLSCAKYKILLKEPNTKTISQSDHFEFNSKFTDRMRRIKIPLPPVDERKKIV 481
+L + + SL K++ + + I F N F+ + + KI + + +
Sbjct: 608 KELTKTIKSL--LDVKMINHDSEKEDIDVESSFSLNMNFSSKRTKFKITTSMQKDTPQEM 665
Query: 482 ED----VDKDRRYAIDAALVRIMKSRKVLGHQQLVSECVEQLSRMFKPDIKAIKKRMEDL 537
E VD+DR+ + AA+VRIMK+RKVL H L+ E + Q F P I IKK +E L
Sbjct: 666 EQTRSAVDEDRKMYLQAAIVRIMKARKVLRHNALIQEVISQSRARFNPSISMIKKCIEVL 725
Query: 538 ITRDYLERDKENPNMFRYLA 557
I + Y+ER + + + + Y+A
Sbjct: 726 IDKQYIERSQASADEYSYVA 745
>MGI|MGI:1918995 [details] [associations]
symbol:Cul2 "cullin 2" species:10090 "Mus musculus"
[GO:0005515 "protein binding" evidence=IPI] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IMP] [GO:0030891
"VCB complex" evidence=ISO] [GO:0031461 "cullin-RING ubiquitin
ligase complex" evidence=IEA] [GO:0031462 "Cul2-RING ubiquitin
ligase complex" evidence=ISO] [GO:0031625 "ubiquitin protein ligase
binding" evidence=ISO] [GO:0032403 "protein complex binding"
evidence=ISO] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
UniPathway:UPA00143 MGI:MGI:1918995 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0016567 GO:GO:0030163 GO:GO:0006511
eggNOG:COG5647 SUPFAM:SSF75632 GO:GO:0031462 InterPro:IPR016159
SUPFAM:SSF74788 GeneTree:ENSGT00550000074299 HOGENOM:HOG000176713
HOVERGEN:HBG106177 KO:K03870 OMA:VMLDYVE CTD:8453 OrthoDB:EOG4Z0B51
EMBL:AK016520 EMBL:AK160597 EMBL:BC026779 EMBL:BC027428
EMBL:BC025902 IPI:IPI00387216 IPI:IPI00387217 RefSeq:NP_083678.2
UniGene:Mm.291707 UniGene:Mm.443148 ProteinModelPortal:Q9D4H8
SMR:Q9D4H8 IntAct:Q9D4H8 STRING:Q9D4H8 PhosphoSite:Q9D4H8
PaxDb:Q9D4H8 PRIDE:Q9D4H8 Ensembl:ENSMUST00000025073
Ensembl:ENSMUST00000162301 GeneID:71745 KEGG:mmu:71745
UCSC:uc008dxz.2 InParanoid:Q9D4H8 NextBio:334387 Bgee:Q9D4H8
CleanEx:MM_CUL2 Genevestigator:Q9D4H8 GermOnline:ENSMUSG00000024231
Uniprot:Q9D4H8
Length = 745
Score = 732 (262.7 bits), Expect = 2.0e-72, P = 2.0e-72
Identities = 172/560 (30%), Positives = 285/560 (50%)
Query: 7 YEKDFEEHMLQDTGAYYSRKASNWILEDSCPEYMIKAEECLKKERDRVSHYLHSSSEPKL 66
Y+ F L +TG YY ++ASN + E +C +YM K LK E R YLH SS K+
Sbjct: 203 YQGIFVSPFLTETGEYYKQEASNLLQESNCSQYMEKVLGRLKDEEIRCRKYLHPSSYTKV 262
Query: 67 VEKVQHELLVVYATELLEKEQSGCRALLREDKVEDLSRMYRLYHKIPKGLEPVANVFKQH 126
+ + Q ++ + + L E C +++++++ D++ MY L + GL + ++H
Sbjct: 263 IHECQQRMVADHL-QFLHSE---CHSIIQQERKNDMANMYVLLRAVSSGLPHMIEELQKH 318
Query: 127 ITAEGTVLVQQAEDAATNQGGSSGAVQEQVLIRKIIELHDKYMEYVTNCFINHTLFHKAL 186
I EG +A T + + + ++E+H K+++ + F AL
Sbjct: 319 IHDEGL----RATSNLTQEH------MPTLFVESVLEVHGKFVQLINTVLNGDQHFMSAL 368
Query: 187 KEAFEIFCNKAVGGS--SSSELLATFCDNILKKGGNEKLSDEAIEETLEKVVKLLAYISD 244
+A N S + ELLA +CDN+LKK + +++ +E+ L + + YI D
Sbjct: 369 DKALTSVVNYREPKSVCKAPELLAKYCDNLLKKSA-KGMTENEVEDKLTSFITVFKYIDD 427
Query: 245 KDLFAEFYRKKLARRLLFDRSANDDHERSILTKLKQQCGGQFTSKMEGMVTDLTLARENQ 304
KD+F +FY + LA+RL+ S + D E +++ KLKQ CG +FTSK+ M TD++++ +
Sbjct: 428 KDVFQKFYARMLAKRLIHGLSMSMDSEEAMINKLKQACGYEFTSKLHRMYTDMSVSADLN 487
Query: 305 TSFEEYLSNNQNAHP-GIDLSVTVLTTGFWPSYK--SSDLNLPSEMVKCVEVFKGFYETK 361
F ++ N GI + VL G WP + SS +P E+ K V++F+ FY
Sbjct: 488 NKFNNFIRNQDTVIDLGISFQIYVLQAGAWPLTQAPSSTFAIPQELEKSVQMFELFYSQH 547
Query: 362 TKHRKLTWIYSLGQCNINGKFEQKNIELIVSTYQAATLLLFNTSDRLSYSEIMTQLNLTH 421
RKLTW++ L + + K +V+TYQ A LL FN S+ +SY E+ +
Sbjct: 548 FSGRKLTWLHYLCTGEVKMNYLGKPYVAMVTTYQMAVLLAFNNSETVSYKELQDSTQMNE 607
Query: 422 DDLVRLLHSLSCAKYKILLKEPNTKTISQSDHFEFNSKFTDRMRRIKIPLPPVDERKKIV 481
+L + + SL K++ + + I F N F+ + + KI + + +
Sbjct: 608 KELTKTIKSL--LDVKMINHDSEKEDIDAESSFSLNMSFSSKRTKFKITTSMQKDTPQEL 665
Query: 482 ED----VDKDRRYAIDAALVRIMKSRKVLGHQQLVSECVEQLSRMFKPDIKAIKKRMEDL 537
E VD+DR+ + AA+VRIMK+RKVL H L+ E + Q F P I IKK +E L
Sbjct: 666 EQTRSAVDEDRKMYLQAAIVRIMKARKVLRHNALIQEVISQSRARFNPSISMIKKCIEVL 725
Query: 538 ITRDYLERDKENPNMFRYLA 557
I + Y+ER + + + + Y+A
Sbjct: 726 IDKQYIERSQASADEYSYVA 745
>WB|WBGene00000838 [details] [associations]
symbol:cul-3 species:6239 "Caenorhabditis elegans"
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0031461 "cullin-RING ubiquitin ligase complex"
evidence=IEA] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0035046 "pronuclear migration"
evidence=IMP] [GO:0008340 "determination of adult lifespan"
evidence=IMP] [GO:0044254 "multicellular organismal protein
catabolic process" evidence=IMP] [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
UniPathway:UPA00143 GO:GO:0005634 GO:GO:0008340 GO:GO:0009792
GO:GO:0035046 GO:GO:0005737 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0016567 GO:GO:0006511 eggNOG:COG5647 SUPFAM:SSF75632
GO:GO:0031461 InterPro:IPR016159 SUPFAM:SSF74788
GeneTree:ENSGT00550000074299 HOGENOM:HOG000176712 KO:K03869
OMA:ATFYGPI EMBL:U58085 EMBL:FO081768 RefSeq:NP_503151.1
ProteinModelPortal:Q17391 SMR:Q17391 IntAct:Q17391 MINT:MINT-274347
STRING:Q17391 PaxDb:Q17391 PRIDE:Q17391 EnsemblMetazoa:Y108G3AL.1.1
EnsemblMetazoa:Y108G3AL.1.2 GeneID:178547 KEGG:cel:CELE_Y108G3AL.1
UCSC:Y108G3AL.1.1 CTD:34896 WormBase:Y108G3AL.1 InParanoid:Q17391
NextBio:901580 GO:GO:0044254 Uniprot:Q17391
Length = 777
Score = 482 (174.7 bits), Expect = 2.1e-72, Sum P(2) = 2.1e-72
Identities = 110/378 (29%), Positives = 193/378 (51%)
Query: 7 YEKDFEEHMLQDTGAYYSRKASNWIL--EDSCPEYMIKAEECLKKERDRVSHYLHSSSEP 64
YE +FE +L++T YY NW+ D+C Y+ + E + E R S YL +E
Sbjct: 199 YEDEFERPLLKETSDYYRDVCKNWLSGDNDAC-FYLAQVEIAMHDEASRASRYLDKMTEA 257
Query: 65 KLVEKVQHELLVVYATELLEKEQSGCRALLREDKVEDLSRMYRLYHKIPKGLEPVANVFK 124
K+++ + ++ + ++ + G + +L K+EDL+R++R++ +I + K
Sbjct: 258 KILQVMDDVMVAEHIQTIVYMQNGGVKFMLEHKKIEDLTRIFRIFKRIGDSVTVPGGGLK 317
Query: 125 QHITAEGTVLVQQAEDAATNQGGSSGAVQEQVLIRKIIELHDKYMEYVTNCFINHTLFHK 184
+ A L + + N+ V + ++++L D + +T F + F
Sbjct: 318 ALLKAVSEYLNETGSNIVKNEDLLKNPVN---FVNELLQLKDYFSSLLTTAFADDRDFKN 374
Query: 185 ALKEAFEIFCNKAVGGSSSSELLATFCDNILKKGGNEKLSDEAIEETLEKVVKLLAYISD 244
+ FE F N S E +A + D++L+ G + +SD ++ L+ V+ L Y+ +
Sbjct: 375 RFQHDFETFLNS---NRQSPEFVALYMDDMLRSG-LKCVSDAEMDNKLDNVMILFRYLQE 430
Query: 245 KDLFAEFYRKKLARRLLFDRSANDDHERSILTKLKQQCGGQFTSKMEGMVTDLTLARENQ 304
KD+F +++++ LA+RLL D+S +DD E+++L KLK +CG QFT K+E M D L
Sbjct: 431 KDVFEKYFKQYLAKRLLLDKSCSDDVEKALLAKLKTECGCQFTQKLENMFRDKELWLTLA 490
Query: 305 TSFEEYLSNNQNAHPGIDLSVTVLTTGFWPSYKSSDLNLPSEMVKCVEVFKGFYETKTKH 364
TSF ++ Q ID+S+ VLT G WP+ + + + LP E+ E+F +Y K
Sbjct: 491 TSFRDW-REAQPTKMSIDISLRVLTAGVWPTVQCNPVVLPQELSVAYEMFTQYYTEKHTG 549
Query: 365 RKLTWIYSLGQCNINGKF 382
RKLT LG ++ F
Sbjct: 550 RKLTINTLLGNADVKATF 567
Score = 279 (103.3 bits), Expect = 2.1e-72, Sum P(2) = 2.1e-72
Identities = 71/197 (36%), Positives = 111/197 (56%)
Query: 372 SLGQCNINGKFEQKNIELIVSTYQAATLLLFNTSDRLSYSEIMTQLNLTHDDLVRLLHSL 431
S G+ K E K ++ V+T+Q LL FN +R+S ++M +L + +L R L SL
Sbjct: 586 SSGESMKERKPEHKILQ--VNTHQMIILLQFNHHNRISCQQLMDELKIPERELKRNLQSL 643
Query: 432 SCAK--YKILLKEPNTK-TISQSDHFEFNSKFTDRMRRIKIPL--------PPVDERKKI 480
+ K +IL+++ K I SD F N F ++ R+K+ + P + E ++
Sbjct: 644 ALGKASQRILVRKNKGKDAIDMSDEFAVNDNFQSKLTRVKVQMVTGKVESEPEIRETRQK 703
Query: 481 VEDVDKDRRYAIDAALVRIMKSRKVLGHQQLVSECVEQLSRMFKPDIKAIKKRMEDLITR 540
VED DR+ ++AA+VRIMK+RK L H LV+E +QL F P IK+R+E LI R
Sbjct: 704 VED---DRKLEVEAAIVRIMKARKKLNHNNLVAEVTQQLRHRFMPSPIIIKQRIETLIER 760
Query: 541 DYLERDKENPNMFRYLA 557
+YL RD+ + ++Y+A
Sbjct: 761 EYLARDEHDHRAYQYIA 777
>UNIPROTKB|Q17391 [details] [associations]
symbol:cul-3 "Cullin-3" species:6239 "Caenorhabditis
elegans" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR001373 InterPro:IPR016157 InterPro:IPR016158
InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557 PROSITE:PS01256
PROSITE:PS50069 SMART:SM00182 SMART:SM00884 UniPathway:UPA00143
GO:GO:0005634 GO:GO:0008340 GO:GO:0009792 GO:GO:0035046
GO:GO:0005737 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0016567
GO:GO:0006511 eggNOG:COG5647 SUPFAM:SSF75632 GO:GO:0031461
InterPro:IPR016159 SUPFAM:SSF74788 GeneTree:ENSGT00550000074299
HOGENOM:HOG000176712 KO:K03869 OMA:ATFYGPI EMBL:U58085
EMBL:FO081768 RefSeq:NP_503151.1 ProteinModelPortal:Q17391
SMR:Q17391 IntAct:Q17391 MINT:MINT-274347 STRING:Q17391
PaxDb:Q17391 PRIDE:Q17391 EnsemblMetazoa:Y108G3AL.1.1
EnsemblMetazoa:Y108G3AL.1.2 GeneID:178547 KEGG:cel:CELE_Y108G3AL.1
UCSC:Y108G3AL.1.1 CTD:34896 WormBase:Y108G3AL.1 InParanoid:Q17391
NextBio:901580 GO:GO:0044254 Uniprot:Q17391
Length = 777
Score = 482 (174.7 bits), Expect = 2.1e-72, Sum P(2) = 2.1e-72
Identities = 110/378 (29%), Positives = 193/378 (51%)
Query: 7 YEKDFEEHMLQDTGAYYSRKASNWIL--EDSCPEYMIKAEECLKKERDRVSHYLHSSSEP 64
YE +FE +L++T YY NW+ D+C Y+ + E + E R S YL +E
Sbjct: 199 YEDEFERPLLKETSDYYRDVCKNWLSGDNDAC-FYLAQVEIAMHDEASRASRYLDKMTEA 257
Query: 65 KLVEKVQHELLVVYATELLEKEQSGCRALLREDKVEDLSRMYRLYHKIPKGLEPVANVFK 124
K+++ + ++ + ++ + G + +L K+EDL+R++R++ +I + K
Sbjct: 258 KILQVMDDVMVAEHIQTIVYMQNGGVKFMLEHKKIEDLTRIFRIFKRIGDSVTVPGGGLK 317
Query: 125 QHITAEGTVLVQQAEDAATNQGGSSGAVQEQVLIRKIIELHDKYMEYVTNCFINHTLFHK 184
+ A L + + N+ V + ++++L D + +T F + F
Sbjct: 318 ALLKAVSEYLNETGSNIVKNEDLLKNPVN---FVNELLQLKDYFSSLLTTAFADDRDFKN 374
Query: 185 ALKEAFEIFCNKAVGGSSSSELLATFCDNILKKGGNEKLSDEAIEETLEKVVKLLAYISD 244
+ FE F N S E +A + D++L+ G + +SD ++ L+ V+ L Y+ +
Sbjct: 375 RFQHDFETFLNS---NRQSPEFVALYMDDMLRSG-LKCVSDAEMDNKLDNVMILFRYLQE 430
Query: 245 KDLFAEFYRKKLARRLLFDRSANDDHERSILTKLKQQCGGQFTSKMEGMVTDLTLARENQ 304
KD+F +++++ LA+RLL D+S +DD E+++L KLK +CG QFT K+E M D L
Sbjct: 431 KDVFEKYFKQYLAKRLLLDKSCSDDVEKALLAKLKTECGCQFTQKLENMFRDKELWLTLA 490
Query: 305 TSFEEYLSNNQNAHPGIDLSVTVLTTGFWPSYKSSDLNLPSEMVKCVEVFKGFYETKTKH 364
TSF ++ Q ID+S+ VLT G WP+ + + + LP E+ E+F +Y K
Sbjct: 491 TSFRDW-REAQPTKMSIDISLRVLTAGVWPTVQCNPVVLPQELSVAYEMFTQYYTEKHTG 549
Query: 365 RKLTWIYSLGQCNINGKF 382
RKLT LG ++ F
Sbjct: 550 RKLTINTLLGNADVKATF 567
Score = 279 (103.3 bits), Expect = 2.1e-72, Sum P(2) = 2.1e-72
Identities = 71/197 (36%), Positives = 111/197 (56%)
Query: 372 SLGQCNINGKFEQKNIELIVSTYQAATLLLFNTSDRLSYSEIMTQLNLTHDDLVRLLHSL 431
S G+ K E K ++ V+T+Q LL FN +R+S ++M +L + +L R L SL
Sbjct: 586 SSGESMKERKPEHKILQ--VNTHQMIILLQFNHHNRISCQQLMDELKIPERELKRNLQSL 643
Query: 432 SCAK--YKILLKEPNTK-TISQSDHFEFNSKFTDRMRRIKIPL--------PPVDERKKI 480
+ K +IL+++ K I SD F N F ++ R+K+ + P + E ++
Sbjct: 644 ALGKASQRILVRKNKGKDAIDMSDEFAVNDNFQSKLTRVKVQMVTGKVESEPEIRETRQK 703
Query: 481 VEDVDKDRRYAIDAALVRIMKSRKVLGHQQLVSECVEQLSRMFKPDIKAIKKRMEDLITR 540
VED DR+ ++AA+VRIMK+RK L H LV+E +QL F P IK+R+E LI R
Sbjct: 704 VED---DRKLEVEAAIVRIMKARKKLNHNNLVAEVTQQLRHRFMPSPIIIKQRIETLIER 760
Query: 541 DYLERDKENPNMFRYLA 557
+YL RD+ + ++Y+A
Sbjct: 761 EYLARDEHDHRAYQYIA 777
>UNIPROTKB|F1N829 [details] [associations]
symbol:CUL2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0031462 "Cul2-RING ubiquitin ligase complex"
evidence=IEA] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006511 SUPFAM:SSF75632
GO:GO:0031462 InterPro:IPR016159 SUPFAM:SSF74788
GeneTree:ENSGT00550000074299 OMA:VMLDYVE EMBL:AADN02000467
EMBL:AADN02000468 EMBL:AADN02000469 IPI:IPI00822359
Ensembl:ENSGALT00000011487 ArrayExpress:F1N829 Uniprot:F1N829
Length = 747
Score = 731 (262.4 bits), Expect = 2.5e-72, P = 2.5e-72
Identities = 175/562 (31%), Positives = 286/562 (50%)
Query: 7 YEKDFEEHMLQDTGAYYSRKASNWILEDSCPEYMIKAEECLKKERDRVSHYLHSSSEPKL 66
Y++ FE L +TG YY ++ASN + E +C +YM K LK E R YLH SS K+
Sbjct: 203 YQEIFECPFLNETGEYYKQEASNLLQESNCSQYMEKVLGRLKDEEMRCRKYLHPSSYGKV 262
Query: 67 VEKVQHELLVVYATELLEKEQSGCRALLREDKVEDLSRMYRLYHKIPKGLEPVANVFKQH 126
+ + Q ++ + + L E C ++R++K D++ MY L + GL + + H
Sbjct: 263 IHECQQRMVADHL-QFLHAE---CHNIIRQEKRNDMANMYTLLRAVSSGLPHMIQELQNH 318
Query: 127 ITAEGTVLVQQAEDAATNQGGSSGAVQEQVLIRKIIELHDKYMEYVTNCFINHTLFHKAL 186
I EG A +N + Q + ++E+H K+++ + F AL
Sbjct: 319 IHDEGL-------RATSNLSQENMPTQ---FVESVLEVHSKFVQLINTVLNGDQHFMSAL 368
Query: 187 KEAFEIFCNKAVGGS--SSSELL--ATFCDNILKKGGNEKLSDEAIEETLEKVVKLLAYI 242
+A N S + ELL A +CDN+LKK + +++ +E+ L + + YI
Sbjct: 369 DKALTSVVNYREPKSICKAPELLELAKYCDNLLKKSA-KGMTENEVEDKLTSFITVFKYI 427
Query: 243 SDKDLFAEFYRKKLARRLLFDRSANDDHERSILTKLKQQCGGQFTSKMEGMVTDLTLARE 302
DKD+F +FY + LA+RL+ S + D E +++ KLKQ CG +FTSK+ M TD++++ +
Sbjct: 428 DDKDVFQKFYARMLAKRLIHGLSMSMDSEEAMINKLKQACGYEFTSKLHRMYTDMSVSAD 487
Query: 303 NQTSFEEYLSNNQNAHP-GIDLSVTVLTTGFWPSYK--SSDLNLPSEMVKCVEVFKGFYE 359
F ++ N GI + VL G WP + SS +P E+ K V++F+ FY
Sbjct: 488 LNNKFNNFIKNQDTIIDLGISFQIYVLQAGAWPLTQAPSSTFAIPQELEKSVQMFELFYS 547
Query: 360 TKTKHRKLTWIYSLGQCNINGKFEQKNIELIVSTYQAATLLLFNTSDRLSYSEIMTQLNL 419
RKLTW++ L + + K +V+TYQ A LL FN S+ +SY E+ +
Sbjct: 548 QHFSGRKLTWLHYLCTGEVKMNYLCKPYVAMVTTYQMAVLLAFNNSETVSYKELQDSTQM 607
Query: 420 THDDLVRLLHSLSCAKYKILLKEPNTKTISQSDHFEFNSKFTDRMRRIKIPLPPVDERKK 479
+L + + SL K++ + + + + F N F+ + + KI + +
Sbjct: 608 NEKELTKTIKSL--LDVKMINHDSDKEDVEAESTFSLNMNFSSKRTKFKITTSMQKDTPQ 665
Query: 480 IVED----VDKDRRYAIDAALVRIMKSRKVLGHQQLVSECVEQLSRMFKPDIKAIKKRME 535
+E VD+DR+ + AA+VRIMK+RKVL H L+ E + Q F P I IKK +E
Sbjct: 666 EMEQTRSAVDEDRKMYLQAAIVRIMKARKVLRHNALIQEVISQSRARFNPSISMIKKCIE 725
Query: 536 DLITRDYLERDKENPNMFRYLA 557
LI + Y+ER + + + + Y+A
Sbjct: 726 VLIDKQYIERSQASADEYSYVA 747
>WB|WBGene00000836 [details] [associations]
symbol:cul-1 species:6239 "Caenorhabditis elegans"
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0031461 "cullin-RING ubiquitin ligase complex"
evidence=IEA] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0040015 "negative regulation of
multicellular organism growth" evidence=IMP] [GO:0040007 "growth"
evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0006974 "response to DNA damage stimulus"
evidence=IMP] [GO:0006898 "receptor-mediated endocytosis"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0008340
"determination of adult lifespan" evidence=IMP] [GO:0007067
"mitosis" evidence=IMP] [GO:0008406 "gonad development"
evidence=IMP] [GO:0016477 "cell migration" evidence=IMP]
[GO:0045930 "negative regulation of mitotic cell cycle"
evidence=IMP] [GO:0008361 "regulation of cell size" evidence=IMP]
[GO:0043066 "negative regulation of apoptotic process"
evidence=IMP] [GO:0008285 "negative regulation of cell
proliferation" evidence=IMP] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
UniPathway:UPA00143 GO:GO:0008340 GO:GO:0009792 GO:GO:0006898
GO:GO:0005737 GO:GO:0040007 GO:GO:0043066 GO:GO:0008285
GO:GO:0051301 GO:GO:0016477 GO:GO:0008406 GO:GO:0007067
GO:GO:0002119 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006974
GO:GO:0008361 GO:GO:0016567 GO:GO:0040015 GO:GO:0006511
eggNOG:COG5647 SUPFAM:SSF75632 GO:GO:0031461 GO:GO:0045930
InterPro:IPR016159 SUPFAM:SSF74788 GeneTree:ENSGT00550000074299
HOGENOM:HOG000176713 KO:K03347 OMA:LDEGHEN EMBL:U58083 EMBL:Z35639
PIR:T20365 RefSeq:NP_499309.1 UniGene:Cel.6661
ProteinModelPortal:Q17389 SMR:Q17389 STRING:Q17389 PaxDb:Q17389
EnsemblMetazoa:D2045.6 GeneID:176466 KEGG:cel:CELE_D2045.6
UCSC:D2045.6 CTD:176466 WormBase:D2045.6 InParanoid:Q17389
NextBio:892698 Uniprot:Q17389
Length = 780
Score = 728 (261.3 bits), Expect = 5.3e-72, P = 5.3e-72
Identities = 177/570 (31%), Positives = 314/570 (55%)
Query: 7 YEKDFEEHMLQDTGAYYSRKASNWILED-SCPEYMIKAEECLKKERDRVSHYLHSSSEPK 65
Y++ FE L+ T +Y+++A+N++ + +YMIK E L +E DR YL+SS++
Sbjct: 228 YKEFFEVKFLEATRGFYTQEAANFLSNGGNVTDYMIKVETRLNQEDDRCQLYLNSSTKTP 287
Query: 66 LVEKVQHELLVVYATELLEKEQSGCRALLREDKVEDLSRMYRLYHKIPKGLEPVANVFKQ 125
L + +L+ + L++ G LL + + +DLSRM++L ++P GL+ + +
Sbjct: 288 LATCCE-SVLISNQLDFLQRHFGG---LLVDKRDDDLSRMFKLCDRVPNGLDELRKSLEN 343
Query: 126 HITAEG-TVLVQQAEDAATNQGGSSGAVQEQVLIRKIIELHDKYMEYVTNCFINHTLFHK 184
HI EG L + A +AAT+ ++ ++ ++E+H++Y V F N F +
Sbjct: 344 HIAKEGHQALERVAMEAATDA---------KLYVKTLLEVHERYQSLVNRSFKNEPGFMQ 394
Query: 185 ALKEAFEIFCNK-AVGG--------SSSSELLATFCDNILKKGGNEKLSDEA-IEETLEK 234
+L +A F N AV + S+ELLA +CD +L+K + K+ DEA +EE K
Sbjct: 395 SLDKAATSFINNNAVTKRAPPQAQLTKSAELLARYCDQLLRK--SSKMPDEAELEELQTK 452
Query: 235 VVKLLAYISDKDLFAEFYRKKLARRLLFDRSANDDHERSILTKLKQQCGGQFTSKMEGMV 294
++ + YI DKD+F++FY K ++RL+ + SA+D+ E + +TKLK CG ++T+++ MV
Sbjct: 453 IMVVFKYIDDKDVFSKFYTKMFSKRLISELSASDEAEANFITKLKSMCGYEYTARLSKMV 512
Query: 295 TDLTLARENQTSFEEYLSNNQNAHPGIDLSVTVLTTGFWPSYKSSDLNLPSEMVKCVEVF 354
D ++++ F+E ++ ++ +V VL++G WP++ ++ + LP ++ K +E+F
Sbjct: 513 NDTQVSKDLTADFKEKKAD-MLGQKSVEFNVLVLSSGSWPTFPTTPITLPQQLSKTIEIF 571
Query: 355 KGFYETKTKHRKLTWIYSLGQCNINGKFEQKNIELIVSTYQAATLLLFNTSDRLSYSEIM 414
FY K R+LTW+YS + I K +T Q T+LLFN D + +I
Sbjct: 572 GQFYNEKFNGRRLTWVYSQSRGEITSTAFPKKYVFTATTAQMCTMLLFNEQDSYTVEQIA 631
Query: 415 TQLNLTHDD---LV-RLLHSLSCAKYKILLKE---PNTKTISQSDHFEFNSKFTDRMRRI 467
+ +V L+ +L L KE P T T+S + + N K + +
Sbjct: 632 AATKMDEKSAPAIVGSLIKNLVLKADTELQKEDEVPMTATVSLNKAY-MNKKVRVDLSKF 690
Query: 468 KIPLPPVDERKKIVEDVDKDRRYAIDAALVRIMKSRKVLGHQQLVSECVEQLSRMFKPDI 527
+ V + + + ++V++DR+ I A +VRIMK+RK + HQQL++E + QLS FKP +
Sbjct: 691 TMKQDAVRDTENVQKNVEEDRKSVISACIVRIMKTRKRVQHQQLMTEVITQLSGRFKPKV 750
Query: 528 KAIKKRMEDLITRDYLERDKENPNMFRYLA 557
+ IK+ + LI ++Y+ R + +++ YLA
Sbjct: 751 EMIKRCIGSLIEKEYMLRTEGQKDLYEYLA 780
>ZFIN|ZDB-GENE-030131-8032 [details] [associations]
symbol:cul2 "cullin 2" species:7955 "Danio rerio"
[GO:0031461 "cullin-RING ubiquitin ligase complex" evidence=IEA]
[GO:0031625 "ubiquitin protein ligase binding" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0001944 "vasculature development" evidence=IMP]
[GO:0009790 "embryo development" evidence=IMP] InterPro:IPR001373
InterPro:IPR016157 InterPro:IPR016158 InterPro:IPR019559
Pfam:PF00888 Pfam:PF10557 PROSITE:PS01256 PROSITE:PS50069
SMART:SM00182 SMART:SM00884 ZFIN:ZDB-GENE-030131-8032
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0009790 GO:GO:0006511
GO:GO:0001944 SUPFAM:SSF75632 GO:GO:0031461 InterPro:IPR016159
SUPFAM:SSF74788 GeneTree:ENSGT00550000074299 EMBL:BX294164
IPI:IPI00998382 Ensembl:ENSDART00000013257 ArrayExpress:F1Q690
Bgee:F1Q690 Uniprot:F1Q690
Length = 764
Score = 727 (261.0 bits), Expect = 6.7e-72, P = 6.7e-72
Identities = 173/560 (30%), Positives = 282/560 (50%)
Query: 7 YEKDFEEHMLQDTGAYYSRKASNWILEDSCPEYMIKAEECLKKERDRVSHYLHSSSEPKL 66
Y++ FE L TG YY ++ASN + E +C +YM K LK E R YLH SS K+
Sbjct: 222 YQEIFEGPFLTKTGEYYKQEASNLLQESNCSQYMEKVLGRLKDEEVRCRKYLHPSSYSKV 281
Query: 67 VEKVQHELLVVYATELLEKEQSGCRALLREDKVEDLSRMYRLYHKIPKGLEPVANVFKQH 126
+ + Q ++ + + L E C+ ++R++K +D++ MY L + GL + + H
Sbjct: 282 IHECQQRMVADHL-QFLHGE---CQNIIRQEKRDDMANMYTLLRAVSSGLPHMIQELQVH 337
Query: 127 ITAEGTVLVQQAEDAATNQGGSSGAVQEQVLIRKIIELHDKYMEYVTNCFINHTLFHKAL 186
I EG A N + + + ++E+H K+++ + F AL
Sbjct: 338 IHDEGI-------RATINLSQEN---MPTLFVESVLEVHSKFVQLINTVLNGDQHFMSAL 387
Query: 187 KEAFEIFCNKAVGGS--SSSELLATFCDNILKKGGNEKLSDEAIEETLEKVVKLLAYISD 244
+A N S + ELLA +CDN+LKK + +++ +E+ L + + YI D
Sbjct: 388 DKALTSVVNYREPKSICKAPELLAKYCDNLLKKSA-KGMTENEVEDKLTSFITVFKYIDD 446
Query: 245 KDLFAEFYRKKLARRLLFDRSANDDHERSILTKLKQQCGGQFTSKMEGMVTDLTLARENQ 304
KD+F + Y + LA+RL+ S + D E +++ KLKQ CG +FTSK+ M TD++++ +
Sbjct: 447 KDVFQKIYARMLAKRLIHGLSLSMDSEEAMINKLKQACGYEFTSKLHRMYTDMSVSTDLN 506
Query: 305 TSFEEYLSNNQNAHP-GIDLSVTVLTTGFWP--SYKSSDLNLPSEMVKCVEVFKGFYETK 361
F ++ + GI + VL G WP SS +P E+ K V++F+ FY
Sbjct: 507 NKFNNFIKTQETVVDLGISFQIYVLQAGAWPLTHVPSSTFAIPQELEKSVQMFELFYNQH 566
Query: 362 TKHRKLTWIYSLGQCNINGKFEQKNIELIVSTYQAATLLLFNTSDRLSYSEIMTQLNLTH 421
RKLTW++ L + + K +V+TYQ A LL FN S+ +SY E+ +
Sbjct: 567 FSGRKLTWLHYLCTGEVKMNYLSKPYVAVVTTYQMAVLLAFNNSETVSYKELQDSTQMNE 626
Query: 422 DDLVRLLHSLSCAKYKILLKEPNTKTISQSDHFEFNSKFTDRMRRIKIPLPPVDERKKIV 481
+L + + SL K++ + + I F FT + + KI + + +
Sbjct: 627 KELQKTIKSL--LDVKMISHDLQKEEIEPESTFSLIMSFTSKRTKFKITTSMQKDTPQEL 684
Query: 482 ED----VDKDRRYAIDAALVRIMKSRKVLGHQQLVSECVEQLSRMFKPDIKAIKKRMEDL 537
E VD+DR+ + AA+VRIMK+RKVL H L+ E + Q F P I IKK +E L
Sbjct: 685 EQTRSAVDEDRKMYLQAAIVRIMKARKVLRHNALIQEVINQSKARFNPSISMIKKCIEVL 744
Query: 538 ITRDYLERDKENPNMFRYLA 557
I + Y+ER + + + + Y+A
Sbjct: 745 IDKQYIERSQSSADEYSYVA 764
>ASPGD|ASPL0000060435 [details] [associations]
symbol:culA species:162425 "Emericella nidulans"
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0019005 "SCF
ubiquitin ligase complex" evidence=IEA] [GO:0032876 "negative
regulation of DNA endoreduplication" evidence=IEA]
InterPro:IPR001373 InterPro:IPR016158 InterPro:IPR019559
Pfam:PF00888 Pfam:PF10557 PROSITE:PS50069 SMART:SM00182
SMART:SM00884 EMBL:BN001308 GO:GO:0016874 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0006511 SUPFAM:SSF75632 GO:GO:0031461
InterPro:IPR016159 SUPFAM:SSF74788 HOGENOM:HOG000176713 OMA:SGVINCY
EnsemblFungi:CADANIAT00001628 Uniprot:C8VU45
Length = 764
Score = 725 (260.3 bits), Expect = 1.1e-71, P = 1.1e-71
Identities = 182/560 (32%), Positives = 307/560 (54%)
Query: 4 MDSYEKDFEEHMLQDTGAYYSRKASNWILEDSCPEYMIKAEECLKKERDRVSHYLHSSSE 63
++ Y F+ L+ T YY ++ ++ ++S EYM KAE L++E+ RV YL++
Sbjct: 211 LEIYRYYFQRPFLEATRIYYEDESRQFVADNSVVEYMKKAEIRLEEEKARVGLYLNNDIS 270
Query: 64 PKLVEKVQHELLVVYATELLEKEQSGCRALLREDKVEDLSRMYRLYHKIPKGLEPVANVF 123
L ++LV +ELL E + LL ++ +DL+RMYRL +I GL+P+ F
Sbjct: 271 KDLTSTCL-DVLVTAHSELLRDE---FQPLLDNERQDDLARMYRLLSRIKDGLDPLRTKF 326
Query: 124 KQHITAEGTVLVQQAEDAATNQGGSSGAVQEQVLIRKIIELHDKYMEYVTNCFINHTLFH 183
+ H+ G V++ AA +G S + ++ + ++ +H +Y V F + F
Sbjct: 327 EAHVRRAGLSAVEKV--AA--EGDS---FEPKMYVDALLSVHTRYHSLVKEAFNGESEFV 379
Query: 184 KALKEAFEIFCNK----AVGGSSSSELLATFCDNILKKGGNEKLSDEA-IEETLEKVVKL 238
++L A F N+ G + + ELLA + D++LK+G K ++E+ +EE L +++ +
Sbjct: 380 RSLDNACREFVNRNKICKSGSTKTPELLAKYTDSLLKRGS--KAAEESELEEMLVQIMTV 437
Query: 239 LAYISDKDLFAEFYRKKLARRLLFDRSANDDHERSILTKLKQQCGGQFTSKMEGMVTDLT 298
YI DKD+F +FY K LA+RL+ S +DD E S+++KLK+ CG ++T+K++ M D+
Sbjct: 438 FKYIEDKDVFQKFYSKMLAKRLVHVSSVSDDAETSMISKLKEACGFEYTNKLQRMFQDIQ 497
Query: 299 LARENQTSFEEYLS----NNQNAHPGIDLSVTVLTTGFWP-SYKSSDLNLPSEMVKCVEV 353
++++ +S++++L ++ + +D +L TGFWP + S+ P E+VK E
Sbjct: 498 ISKDLNSSYKDWLEKSFLDDDDRKKLVDSHFQILGTGFWPLTAPSTSFLAPPEIVKTSER 557
Query: 354 FKGFYETKTKHRKLTWIYSLGQCNINGKFEQKNIEL----IVSTYQAATLLLFNTSDRLS 409
F+ FY K RKLTW++ L + + + KN ++ +VSTYQ LLLFN SD L+
Sbjct: 558 FQKFYCDKHNGRKLTWLWQLCKGELKANYI-KNTKVPYTFLVSTYQMGILLLFNESDTLT 616
Query: 410 YSEIMTQLNLTHDDLVRLLHSLSCAKYKILLKEPNTKTISQSDHFEFNSKFTDRMRRIKI 469
YS+I LT + L L K K+L P F N F ++ ++ +
Sbjct: 617 YSDIQKATTLTPEILDPNLSIF--LKAKVLNISPEGSKPGPDSTFSLNYNFKNKKIKVNL 674
Query: 470 PLPPVDERKKIVED----VDKDRRYAIDAALVRIMKSRKVLGHQQLVSECVEQLSRMFKP 525
+ E+K +D +++DR+ + +A+VRIMKSRK + H QLV E + Q+ F P
Sbjct: 675 NIQIRSEQKVETDDTHKTIEEDRKLLLQSAIVRIMKSRKKMKHVQLVQEVIHQVKSRFPP 734
Query: 526 DIKAIKKRMEDLITRDYLER 545
+ IKK +E L+ +DY+ER
Sbjct: 735 QVPDIKKNIEALMEKDYIER 754
>POMBASE|SPAC17G6.12 [details] [associations]
symbol:cul1 "cullin 1" species:4896 "Schizosaccharomyces
pombe" [GO:0005829 "cytosol" evidence=IDA] [GO:0007346 "regulation
of mitotic cell cycle" evidence=IC] [GO:0019005 "SCF ubiquitin
ligase complex" evidence=IDA] [GO:0031625 "ubiquitin protein ligase
binding" evidence=IEA] [GO:0032876 "negative regulation of DNA
endoreduplication" evidence=IMP] [GO:0042787 "protein
ubiquitination involved in ubiquitin-dependent protein catabolic
process" evidence=IC] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
UniPathway:UPA00143 PomBase:SPAC17G6.12 GO:GO:0005829 GO:GO:0007346
EMBL:CU329670 GO:GO:0051301 GenomeReviews:CU329670_GR
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0007049 GO:GO:0019005
SUPFAM:SSF75632 GO:GO:0032876 GO:GO:0042787 InterPro:IPR016159
SUPFAM:SSF74788 HOGENOM:HOG000176713 KO:K03347 OMA:SGVINCY
OrthoDB:EOG4W3WW4 EMBL:AB016896 EMBL:AB027897 PIR:T37844 PIR:T43398
RefSeq:NP_594259.1 ProteinModelPortal:O13790 IntAct:O13790
MINT:MINT-3377010 STRING:O13790 EnsemblFungi:SPAC17G6.12.1
GeneID:2542393 KEGG:spo:SPAC17G6.12 NextBio:20803452 Uniprot:O13790
Length = 767
Score = 723 (259.6 bits), Expect = 1.8e-71, P = 1.8e-71
Identities = 179/566 (31%), Positives = 305/566 (53%)
Query: 4 MDSYEKDFEEHMLQDTGAYYSRKASNWILEDSCPEYMIKAEECLKKERDRVSHYLHSSSE 63
+ SY+ FE + +++T +Y++++S ++ S +Y+ KAE L +E + V YLH S+
Sbjct: 218 LSSYKTFFETNFIENTKNFYAKESSEYLASHSITDYLKKAEIRLAEEEELVRLYLHESTL 277
Query: 64 PKLVEKVQHELLVVYATELLEKEQSGCRALLREDKVEDLSRMYRLYHKIPKGLEPVANVF 123
L+E + ++L+ E+L + + +L ++ ED+ RMYRL + P GL+P+ F
Sbjct: 278 KPLLEATE-DVLIAQHEEVLHNDFA---RMLDQNCSEDIIRMYRLMSRTPNGLQPLRQTF 333
Query: 124 KQHITAEGTVLVQQAEDAATNQGGSSGAVQEQVLIRKIIELHDKYMEYVTNCFINHTLFH 183
++ + G V + Q G V + + ++ + E V F T F
Sbjct: 334 EEFVKRSGFAAVAKI----VPQVGGEADVDPKEYMEMLLSTYKASKELVNTAFHGDTDFT 389
Query: 184 KALKEAFEIFCNKAV----GGSSSSELLATFCDNILKKGGNEKLSDEAIEETLEKVVKLL 239
K+L AF N+ V S S ELLA + D+IL+K N+ + + +E+ L ++ +
Sbjct: 390 KSLDTAFRELVNRNVVCQRSSSRSPELLAKYADSILRKS-NKNVDIDDVEDCLSSIIIIF 448
Query: 240 AYISDKDLFAEFYRKKLARRLLFDRSANDDHERSILTKLKQQCGGQFTSKMEGMVTDLTL 299
Y+ DKD+F FY K LA+RL+ S + D E S+L+KLK+ CG ++TSK++ M D++L
Sbjct: 449 RYVEDKDVFQNFYTKLLAKRLVNGTSNSQDAESSMLSKLKEVCGFEYTSKLQRMFQDISL 508
Query: 300 ARENQTSFEEYLSNNQNAHPGIDLSVTVLTTGFWP-SYKSSDLNLPSEMVKCVEVFKGFY 358
++E +F + Q+ ID S VL T FWP S + + +LP E+V E F+ +Y
Sbjct: 509 SQEITEAFWQL---PQSRAGNIDFSALVLGTSFWPLSPNNVNFHLPEELVPLYEGFQNYY 565
Query: 359 ETKTKHRKLTWIYSLGQCNINGKFE-QKNIELI--VSTYQAATLLLFNTSDRLSYSEIMT 415
+ RKL+W++ L + I + Q N+ + VSTYQ LLL+N D +Y E+
Sbjct: 566 YSCHNGRKLSWLFHLSKGEIKARINPQTNVTYVFQVSTYQMGVLLLYNHRDSYTYEELAK 625
Query: 416 QLNLTHDDLVRLLHSLSCAKYKILLKEPNTKTISQSDHFEFNSKFTDRMRRIKIPLPPVD 475
L+ D L +L+ K K+LL N K + ++ N F + R+++ LP
Sbjct: 626 ITGLSTDFLTGILNIF--LKAKVLLLGDNDKLGDPNSTYKINENFRMKKIRVQLNLPIRS 683
Query: 476 ERKK----IVEDVDKDRRYAIDAALVRIMKSRKVLGHQQLVSECVEQLSRMFKPDIKAIK 531
E+K+ + +++DR+ + +A+VRIMK+R+ L H LV E ++Q+ F P + IK
Sbjct: 684 EQKQESLETHKTIEEDRKLLLQSAIVRIMKARRTLKHVVLVKETIDQIKSRFTPKVSDIK 743
Query: 532 KRMEDLITRDYLERDKENPNMFRYLA 557
+ ++ LI ++YLER + + + YLA
Sbjct: 744 QCIDMLIEKEYLER--QGRDEYIYLA 767
>FB|FBgn0015509 [details] [associations]
symbol:lin19 "lin-19-like" species:7227 "Drosophila
melanogaster" [GO:0000152 "nuclear ubiquitin ligase complex"
evidence=ISS] [GO:0019005 "SCF ubiquitin ligase complex"
evidence=NAS] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0031461 "cullin-RING ubiquitin ligase
complex" evidence=IEA] [GO:0031625 "ubiquitin protein ligase
binding" evidence=IEA] [GO:0007095 "mitotic G2 DNA damage
checkpoint" evidence=IGI] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
UniPathway:UPA00143 EMBL:AE013599 GO:GO:0007095 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0016567 HOGENOM:HOG000021491 GO:GO:0006511
GO:GO:0019005 eggNOG:COG5647 SUPFAM:SSF75632 InterPro:IPR016159
SUPFAM:SSF74788 GeneTree:ENSGT00550000074299 KO:K03347 EMBL:L41642
EMBL:AF136343 EMBL:BT010290 RefSeq:NP_523655.1 RefSeq:NP_724621.1
RefSeq:NP_724622.1 RefSeq:NP_724623.1 UniGene:Dm.7926
ProteinModelPortal:Q24311 SMR:Q24311 DIP:DIP-19461N IntAct:Q24311
MINT:MINT-989395 STRING:Q24311 PaxDb:Q24311
EnsemblMetazoa:FBtr0088845 EnsemblMetazoa:FBtr0088846
EnsemblMetazoa:FBtr0088847 EnsemblMetazoa:FBtr0088848 GeneID:35742
KEGG:dme:Dmel_CG1877 UCSC:CG1877-RA CTD:35742 FlyBase:FBgn0015509
InParanoid:Q24311 OMA:NECIAES OrthoDB:EOG42280P PhylomeDB:Q24311
GenomeRNAi:35742 NextBio:794991 Bgee:Q24311 GermOnline:CG1877
Uniprot:Q24311
Length = 774
Score = 717 (257.5 bits), Expect = 7.7e-71, P = 7.7e-71
Identities = 185/573 (32%), Positives = 300/573 (52%)
Query: 3 QMDSYEKDFEEHMLQDTGAYYSRKASNWILEDSCPEYMIKAEECLKKERDRVSHYLHSSS 62
++ Y+++FE + DT A+Y +++ ++ ++ EY+ E L++E RV + +
Sbjct: 215 KLSVYKQNFENKFIADTSAFYEKESDAFLSTNTVTEYLKHVENRLEEETQRVRGFNSKNG 274
Query: 63 EPKLVEKVQHELLVVYATELLEKE----QSGCRALLREDKVEDLSRMYRLYHKIPKGLEP 118
L E L L+EK + + LL D+ +DL RMY L K L
Sbjct: 275 LSYLHETTADVLKSTCEEVLIEKHLKIFHTEFQNLLNADRNDDLKRMYSLVALSSKNLTD 334
Query: 119 VANVFKQHITAEGTVLVQQAEDAATNQGGSSGAVQEQVLIRKIIELHDKYMEYVTNCFIN 178
+ ++ + HI +GT + A+ T+ A + ++ I+++H KY V F N
Sbjct: 335 LKSILENHILHQGTEAI--AKCCTTD-----AANDPKTYVQTILDVHKKYNALVLTAFNN 387
Query: 179 HTLFHKALKEAFEIFCNKAV-----GGSSSSELLATFCDNILKKGGNEKLSDEAIEETLE 233
F AL +A F N V S S ELLA +CD +LKK D+ +E+ L
Sbjct: 388 DNGFVAALDKACGKFINSNVVTIANSASKSPELLAKYCDLLLKKSSKNP-EDKELEDNLN 446
Query: 234 KVVKLLAYISDKDLFAEFYRKKLARRLLFDRSANDDHERSILTKLKQQCGGQFTSKMEGM 293
+V+ + YI DKD+F ++Y K LA+RL+ SA+DD E +++KLKQ CG ++T K++ M
Sbjct: 447 QVMVVFKYIEDKDVFQKYYSKMLAKRLVNHTSASDDAEAMMISKLKQTCGYEYTVKLQRM 506
Query: 294 VTDLTLARENQTSFEEYLSNNQNAHPGIDLSVTVLTTGFWPSYKSSDLNLPSEMVKCVEV 353
D+ ++++ + F++YL+ +N ID + VL++G WP S++ LPSE+ + V
Sbjct: 507 FQDIGVSKDLNSYFKQYLAE-KNLTMEIDFGIEVLSSGSWPFQLSNNFLLPSELERSVRQ 565
Query: 354 FKGFYETKTKHRKLTWIYSL--GQCNIN-GKFEQKNIELIVSTYQAATLLLFNTSDRLSY 410
F FY + RKL W+Y + G+ +N + L ST+Q + LL FN D+LS+
Sbjct: 566 FNEFYAARHSGRKLNWLYQMCKGELIMNVNRNNSSTYTLQASTFQMSVLLQFN--DQLSF 623
Query: 411 S--EIMTQLNLTHDDLVRLLHSLSCAKYKILLKEPNTKTISQSDHFEFNSKFTDRMRRIK 468
+ ++ ++L+++L L K K+L N +++ E + ++ RRI
Sbjct: 624 TVQQLQDNTQTQQENLIQVLQIL--LKAKVLTSSDNENSLTPESTVELFLDYKNKKRRIN 681
Query: 469 IPLPPVDERKKIVEDVDK----DRRYAIDAALVRIMKSRKVLGHQQLVSECVEQLSRMFK 524
I P E K E V K DR+ I AA+VRIMK RK L H L+SE + QLS FK
Sbjct: 682 INQPLKTELKVEQETVHKHIEEDRKLLIQAAIVRIMKMRKRLNHTNLISEVLNQLSTRFK 741
Query: 525 PDIKAIKKRMEDLITRDYLERDKENPNMFRYLA 557
P + IKK ++ LI ++YLER + + + + YLA
Sbjct: 742 PKVPVIKKCIDILIEKEYLERMEGHKDTYSYLA 774
>UNIPROTKB|I3L5M8 [details] [associations]
symbol:LOC100739075 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0031461 "cullin-RING ubiquitin ligase complex"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006511 SUPFAM:SSF75632
GO:GO:0031461 GeneTree:ENSGT00550000074299 EMBL:CU468368
Ensembl:ENSSSCT00000028601 OMA:PRQLRNT Uniprot:I3L5M8
Length = 328
Score = 701 (251.8 bits), Expect = 3.8e-69, P = 3.8e-69
Identities = 147/330 (44%), Positives = 203/330 (61%)
Query: 232 LEKVVKLLAYISDKDLFAEFYRKKLARRLLFDRSANDDHERSILTKLKQQCGGQFTSKME 291
L+K++ + +I KD+F FY+K LA+RLL +SA+ D E+S+L+KLK +CG FTSK+E
Sbjct: 2 LDKIMIIFRFIYGKDVFEAFYKKDLAKRLLVGKSASVDAEKSMLSKLKHECGAAFTSKLE 61
Query: 292 GMVTDLTLARENQTSFEEYLSNNQNAHPGIDLSVTVLTTGFWPSYKSSDLNLPSEMVKCV 351
GM D+ L+++ F++Y+ N QN I+L+V +LT G+WP+Y +++LP EMVK
Sbjct: 62 GMFKDMELSKDIMIQFKQYMQN-QNVPGNIELTVNILTMGYWPTYVPMEVHLPPEMVKLQ 120
Query: 352 EVFKGFYETKTKHRKLTWIYSLGQCNINGKFEQKNIELIVSTYQAATLLLFNTSDRLSYS 411
E+FK FY K RKL W +LG C + +F++ EL VS +Q LL+FN + S
Sbjct: 121 EIFKTFYLGKHSGRKLQWQSTLGHCVLKAEFKEGKKELQVSLFQTLVLLMFNEGEEFSLE 180
Query: 412 EIMTQLNLTHDDLVRLLHSLSCAKYKILLKEPNTKTISQSDHFEFNSKFTDRMRRIKIPL 471
EI + +L R L SL+C K ++L K P K I D F N F ++ RIKI
Sbjct: 181 EIKQATGIEDGELRRTLQSLACGKARVLAKNPKGKDIEDGDKFICNDDFKHKLFRIKINQ 240
Query: 472 ----PPVDERKKIVEDVDKDRRYAIDAALVRIMKSRKVLGHQQLVSECVEQLSRMFKPDI 527
V+E+ E V +DR+Y IDAA+VRIMK RK L H LVSE QL KP
Sbjct: 241 IQMKETVEEQASTTERVFQDRQYQIDAAIVRIMKMRKTLSHNLLVSEVYNQLKFPVKP-- 298
Query: 528 KAIKKRMEDLITRDYLERDKENPNMFRYLA 557
+KKR+E LI RDY+ERDKENPN + Y+A
Sbjct: 299 ADLKKRIESLIDRDYMERDKENPNQYNYIA 328
>ASPGD|ASPL0000014731 [details] [associations]
symbol:culC species:162425 "Emericella nidulans"
[GO:0031461 "cullin-RING ubiquitin ligase complex" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
InterPro:IPR001373 InterPro:IPR016157 InterPro:IPR016158
InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557 PROSITE:PS01256
PROSITE:PS50069 SMART:SM00182 SMART:SM00884 GO:GO:0016874
Gene3D:1.10.10.10 InterPro:IPR011991 EMBL:BN001302 GO:GO:0006511
SUPFAM:SSF75632 GO:GO:0031461 InterPro:IPR016159 SUPFAM:SSF74788
OMA:ATFYGPI EnsemblFungi:CADANIAT00004755 Uniprot:C8V637
Length = 823
Score = 417 (151.9 bits), Expect = 1.7e-68, Sum P(2) = 1.7e-68
Identities = 128/432 (29%), Positives = 204/432 (47%)
Query: 7 YEKDFEEHMLQDTGAYYSRKASNWILEDSCPEYMIKAEECLKKERDRVSHYLHSSSEPKL 66
Y FE L+ + A+Y + + + + +E++R + + SE K+
Sbjct: 230 YLTSFEPDYLEASAAFYRAEGKRLLETVDAATFCAVVSARIAEEKERCQYTISLLSESKI 289
Query: 67 VEKVQHELLVVYATELLEKEQSGCRALLREDKVEDLSRMYRLYHKI-PKGLEPVANVFKQ 125
E V +EL+ E++ E +G R +L D++++LS++Y L ++ PK A V K+
Sbjct: 290 KEIVDNELIRNNLAEVVNFEGTGVRVMLDHDRIDNLSKIYALSARVDPKKTHLTAAVQKR 349
Query: 126 ------HITAEGTVLVQ---QAEDAATNQGGSSGAVQE----QVL------IRKIIELHD 166
I L Q Q + T+ G +E QV + I+ L
Sbjct: 350 IVEMGNEINNASFALAQAPAQPKSTGTDAGQKKEKEKEKPVNQVTSSAIKWVDDILALKK 409
Query: 167 KYMEYVTNCFINHTLFHKALKEAFEIFCNKAVGGSSSSELLATFCDNILKKGGNEKLSDE 226
K+ + F + + A+ +F F N SSE L+ F D LKKG K +D
Sbjct: 410 KFDGIWKDAFGSDQVLQSAITASFSSFLNST---PRSSEFLSLFFDENLKKGVKGK-TDN 465
Query: 227 AIEETLEKVVKLLAYISDKDLFAEFYRKKLARRLLFDRSANDDHERSILTKLKQQCGGQF 286
++ LE + LL YI DKD F +Y+K L+RRLL RS + D ER +++K+K + G QF
Sbjct: 466 EVDALLENGITLLRYIKDKDRFEAYYKKHLSRRLLMKRSMSMDAERQMISKMKMEVGNQF 525
Query: 287 TSKMEGMVTDLTLARENQTSFEEYLSNNQNAHPG-IDLSVTVLTTGFWP-----SYKSSD 340
T ++E M D+T++ + S+++++ + +L + VLT+ WP S +
Sbjct: 526 TQRLEAMFRDMTISEDLTASYKQFVREQGDPDKKRFELDINVLTSTMWPMEIMSSSRDGQ 585
Query: 341 LNLPSEMVKCVEV----FKGFYETKTKHRKLTWIYSLGQCNINGKFEQKN-----IELIV 391
+ LP + K VE F+ FY K RKL+W S+G +I F + N EL V
Sbjct: 586 VELPCIIPKEVETVKQSFEKFYLDKHSGRKLSWQPSMGTADIKATFHRSNGKVQRHELNV 645
Query: 392 STYQAATLLLFN 403
STY LLLFN
Sbjct: 646 STYAMFILLLFN 657
Score = 313 (115.2 bits), Expect = 1.7e-68, Sum P(2) = 1.7e-68
Identities = 74/191 (38%), Positives = 113/191 (59%)
Query: 379 NGKFEQKNIELIVSTYQAATLLLFNT---SDRLSYSEIMTQLNLTHDDLVRLLHSLSCA- 434
NGK ++ EL VSTY LLLFN + L++ EI + + +DL+R L SL+ A
Sbjct: 635 NGKVQRH--ELNVSTYAMFILLLFNDIPIGESLTFEEIQARTRIPDNDLIRNLQSLAVAP 692
Query: 435 KYKILLKEPNTKTISQSDHFEFNSKFTDRMRRIKI--------PLPPVDERKKIVEDVDK 486
K ++L K P ++ + +D F FN+ F +++I + D+RK+ E ++
Sbjct: 693 KTRVLKKVPMSRDVKPTDKFYFNNDFQSPFMKVRIGVVSGGANKVESQDQRKETEEKMNN 752
Query: 487 DRRYAIDAALVRIMKSRKVLGHQQLVSECVEQLSRMFKPDIKAIKKRMEDLITRDYLERD 546
+R +I+AA+VRIMK RK L H L+SE + QLS F PD+ +K+R+E LI R+YLER
Sbjct: 753 ERGGSIEAAIVRIMKQRKTLIHSNLISEVLSQLSARFVPDVNMVKRRIESLIDREYLERV 812
Query: 547 KENPNMFRYLA 557
E+P + Y+A
Sbjct: 813 SEDPPTYGYVA 823
>FB|FBgn0032956 [details] [associations]
symbol:Cul-2 "Cullin-2" species:7227 "Drosophila
melanogaster" [GO:0000152 "nuclear ubiquitin ligase complex"
evidence=ISS] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0031625 "ubiquitin protein ligase
binding" evidence=IEA] [GO:0031461 "cullin-RING ubiquitin ligase
complex" evidence=IEA] [GO:0022008 "neurogenesis" evidence=IMP]
[GO:0007295 "growth of a germarium-derived egg chamber"
evidence=IMP] [GO:0008582 "regulation of synaptic growth at
neuromuscular junction" evidence=IMP] InterPro:IPR001373
InterPro:IPR016157 InterPro:IPR016158 InterPro:IPR019559
Pfam:PF00888 Pfam:PF10557 PROSITE:PS01256 PROSITE:PS50069
SMART:SM00182 SMART:SM00884 EMBL:AE014134 GO:GO:0022008
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006511 eggNOG:COG5647
SUPFAM:SSF75632 GO:GO:0031461 GO:GO:0008582 InterPro:IPR016159
SUPFAM:SSF74788 GeneTree:ENSGT00550000074299 GO:GO:0007295
HSSP:Q9JLV5 CTD:35420 KO:K03870 OMA:VMLDYVE EMBL:AY061434
RefSeq:NP_610117.1 RefSeq:NP_724352.1 UniGene:Dm.6467 SMR:Q9V9R2
IntAct:Q9V9R2 MINT:MINT-904022 STRING:Q9V9R2
EnsemblMetazoa:FBtr0085899 EnsemblMetazoa:FBtr0085900 GeneID:35420
KEGG:dme:Dmel_CG1512 UCSC:CG1512-RA FlyBase:FBgn0032956
InParanoid:Q9V9R2 OrthoDB:EOG4HDR8R GenomeRNAi:35420 NextBio:793437
Uniprot:Q9V9R2
Length = 753
Score = 684 (245.8 bits), Expect = 2.4e-67, P = 2.4e-67
Identities = 176/567 (31%), Positives = 297/567 (52%)
Query: 2 GQMDSYEKDFEEHMLQDTGAYYSRKASNWILEDSCPEYMIKAEECLKKERDRVSHYLHSS 61
G + Y++ FE ML+ +GAYY+ +A+ + S EYM + L+ E R +LH S
Sbjct: 210 GSLKLYQELFEGPMLEASGAYYTDEANKLLHRCSVSEYMQEVIRILEYESRRAQKFLHVS 269
Query: 62 SEPKLVEKVQHELLVVYATELLEKEQSGCRALLREDKVEDLSRMYRLYHKIPKGLEP-VA 120
S PKL ++ + + + + L S CR ++ E++ +DL MY + IP L+ +
Sbjct: 270 SLPKLRKECEEKFI----NDRLGFIYSECREMVSEERRQDLRNMYVVLKPIPDNLKSELI 325
Query: 121 NVFKQHITAEGTVLVQQAEDAATNQGGSSGAVQEQVLIRKIIELHDKYMEYVTNCFINHT 180
F HI +EG V + G + + + ++++H KY E + + F N +
Sbjct: 326 TTFLDHIKSEGLQTVSALK-------GENIHI---AFVENMLKVHHKYQELIADVFENDS 375
Query: 181 LFHKALKEAFEIFCNKAVGGSS---SSELLATFCDNILKKGGNEKLSDEAIEETLEKVVK 237
LF AL +A N+ S+E +A +CD +LKK K + I++ L +
Sbjct: 376 LFLSALDKACASVINRRPTERQPCRSAEYVAKYCDTLLKKS---KTCEAEIDQKLTNNIT 432
Query: 238 LLAYISDKDLFAEFYRKKLARRLLFDRSANDDHERSILTKLKQQCGGQFTSKMEGMVTDL 297
+ YI DKD++ +FY + LA+RL+ ++S + D E ++ +LKQ CG +FT+K+ M TD+
Sbjct: 433 IFKYIEDKDVYQKFYSRLLAKRLIHEQSQSMDAEEGMINRLKQACGYEFTNKLHRMFTDI 492
Query: 298 TLARENQTSFEEYLSNNQNAHPGIDLSVTVLTTGFWP--SYKSSDLNLPSEMVKCVEVFK 355
+++ + F +L ++ N GI+L++ VL G WP S + +P E K +++F+
Sbjct: 493 SVSVDLNNKFNTHLKDS-NVDLGINLAIKVLQAGAWPLGSTQVIPFAVPQEFEKSIKMFE 551
Query: 356 GFYETKTKHRKLTWIYSLGQCNINGKFEQKNIELIVSTYQAATLLLFNTSDRLSYSEIMT 415
+Y RKLTW++ + + +K+ + + TYQ A +LLF T D LS EI
Sbjct: 552 DYYHKLFSGRKLTWLHHMCHGELKLSHLKKSYIVTMQTYQMAIILLFETCDSLSCREIQN 611
Query: 416 QLNLTHDDLVRLLHSLSCAKYKILLKEPNTKTISQSDHFEFNSKFTDRMRRIKIPLPPVD 475
L L + + H + K+L +++ ++ E N +T++ + KI
Sbjct: 612 TLQLNDETFQK--HMQPIIESKLL--NASSENLAGETRIELNLDYTNKRTKFKISSALQK 667
Query: 476 ERKKIVE----DVDKDRRYAIDAALVRIMKSRKVLGHQQLVSECVEQLSRM-FKPDIKAI 530
E + VE VD+DR+ + AA+VRIMK+RKVL H L+ E V LS++ F P+I I
Sbjct: 668 ETPQEVEHTINSVDEDRKLFLQAAIVRIMKARKVLKHNALIQE-VLSLSKVSFTPNIAMI 726
Query: 531 KKRMEDLITRDYLERDKENPNMFRYLA 557
KK +E LI + Y+ER + + + Y+A
Sbjct: 727 KKCVESLIDKQYIERTANSGDEYSYMA 753
>ASPGD|ASPL0000052453 [details] [associations]
symbol:culD species:162425 "Emericella nidulans"
[GO:0005634 "nucleus" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0043494 "CLRC ubiquitin ligase complex"
evidence=IEA] [GO:0008180 "signalosome" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0031625
"ubiquitin protein ligase binding" evidence=IEA] [GO:0031048
"chromatin silencing by small RNA" evidence=IEA] [GO:0006283
"transcription-coupled nucleotide-excision repair" evidence=IEA]
[GO:0045836 "positive regulation of meiosis" evidence=IEA]
[GO:0042787 "protein ubiquitination involved in ubiquitin-dependent
protein catabolic process" evidence=IEA] [GO:0030702 "chromatin
silencing at centromere" evidence=IEA] [GO:0051570 "regulation of
histone H3-K9 methylation" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0000070 "mitotic sister chromatid segregation"
evidence=IEA] [GO:0031507 "heterochromatin assembly" evidence=IEA]
[GO:0030466 "chromatin silencing at silent mating-type cassette"
evidence=IEA] [GO:0006348 "chromatin silencing at telomere"
evidence=IEA] [GO:0034613 "cellular protein localization"
evidence=IEA] [GO:0032876 "negative regulation of DNA
endoreduplication" evidence=IEA] InterPro:IPR001373
InterPro:IPR016157 InterPro:IPR016158 InterPro:IPR019559
Pfam:PF00888 Pfam:PF10557 PROSITE:PS01256 PROSITE:PS50069
SMART:SM00182 SMART:SM00884 EMBL:BN001308 GO:GO:0016874
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006511 SUPFAM:SSF75632
GO:GO:0031461 InterPro:IPR016159 SUPFAM:SSF74788
HOGENOM:HOG000176712 OMA:FEDSLDF EnsemblFungi:CADANIAT00002720
Uniprot:C8VRE7
Length = 880
Score = 678 (243.7 bits), Expect = 1.1e-66, P = 1.1e-66
Identities = 188/584 (32%), Positives = 298/584 (51%)
Query: 4 MDSYEKDFEEHMLQDTGAYYSRKASNWILEDSC---PEYMIKAEECLKKERDRVSHY-LH 59
+D Y FE ++ + ++S W +++ Y+ + +++E +R + +
Sbjct: 321 LDVYVSGFEPVLVSGSKDFFSL----WAQQEATGYLASYVENSHRLIEREMNRCEQFSFN 376
Query: 60 SSSEPKLVEKVQHELLVVYATELLEKEQSGCRALLREDKVEDLSRMYRLYHKIPKGLEPV 119
+++ KL E + L+ + LL Q LLR L ++Y L + G + +
Sbjct: 377 RTTKQKLSESLDQTLVTDQESVLLS--QKDVLGLLRIGNKIALGQLYTLLERRDLGAK-L 433
Query: 120 ANVFKQHITAEGTVLVQQAEDAATNQGGSSGAVQEQVLIRKIIELHDKYME-YVTNCFIN 178
F +I EGT +V +A V + +K +L D + E + N +
Sbjct: 434 KGAFSTYIVEEGTGIVFDESEA--------DMVVRLLSFKK--QLDDIWNESFRRNEGLG 483
Query: 179 HTLFHKALKEAFEIFCNK--AVGGSSS---SELLATFCDNILKKGG---------NEKLS 224
H L + E+F K A GG+ + E++A + D +L+ G N L+
Sbjct: 484 HAL--RESFESFMNKGRKSDATGGTDNPKTGEMIAKYVDRLLRGGWRLAPTREAENMPLA 541
Query: 225 DE--AIEETLEKVVKLLAYISDKDLFAEFYRKKLARRLLFDRSANDDHERSILTKLKQQC 282
DE I L++V+ L ++ K +F FY+ LARRLL RSA+DD E+S+L +LK +C
Sbjct: 542 DEDAEINRQLDQVLDLFRFVHGKAVFEAFYKNDLARRLLMGRSASDDAEKSMLARLKTEC 601
Query: 283 GGQFTSKMEGMVTDLTLARENQTSFEEYLSNNQNAHPGIDLSVTVLTTGFWPSYKSSDLN 342
G FT +E M D+ +AR+ +++ Q P +DL V+VL+ WP+Y +
Sbjct: 602 GSSFTHNLESMFKDMEVARDEMSAYNSIKRERQTPLP-VDLHVSVLSASAWPTYPDVQVR 660
Query: 343 LPSEMVKCVEVFKGFYETKTKHRKLTWIYSLGQCNINGKFEQKNIELIVSTYQAATLLLF 402
+P E+ + F+ FY+TK RKL W + L C + +F N EL+VS++QA LLLF
Sbjct: 661 IPPEIATAISDFEKFYDTKYNGRKLAWKHQLAHCQLRARFPNGNKELVVSSFQAIVLLLF 720
Query: 403 NT---SDRLSYSEIMTQLNLTHDDLVRLLHSLSCAKYKILLKEPNTKTISQSDHFEFNSK 459
N L+Y +I L+ +L R L SL+CAKY++L K+P + +S +D F +N+
Sbjct: 721 NELPEGGTLNYRQIQEATTLSDQELTRTLQSLACAKYRVLSKKPKGRDVSPTDEFSYNAS 780
Query: 460 FTDRMRRIKI---PLPPVDERKKIV-EDVDKDRRYAIDAALVRIMKSRKVLGHQQLVSEC 515
FTD RIKI L E K E V DR Y AA+VRIMKSRK + H +LV+E
Sbjct: 781 FTDPKFRIKINQIQLKETKEENKTTHERVAADRHYETQAAIVRIMKSRKTITHAELVAEV 840
Query: 516 VEQL-SR-MFKPDIKAIKKRMEDLITRDYLERDKENPNMFRYLA 557
++ SR + +P IKK +E LI +DY+ER E+ N ++Y+A
Sbjct: 841 IKATRSRGVLEP--ADIKKNIEKLIEKDYMER--EDGNRYQYVA 880
>WB|WBGene00000837 [details] [associations]
symbol:cul-2 species:6239 "Caenorhabditis elegans"
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0031461 "cullin-RING ubiquitin ligase complex"
evidence=IEA] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0051759 "sister chromosome movement
towards spindle pole involved in meiotic sister chromatid
segregation" evidence=IMP] [GO:0007138 "meiotic anaphase II"
evidence=IMP] [GO:0042078 "germ-line stem cell division"
evidence=IMP] [GO:0008054 "cyclin catabolic process" evidence=IMP]
[GO:0051232 "meiotic spindle elongation" evidence=IMP] [GO:0008595
"anterior/posterior axis specification, embryo" evidence=IMP]
[GO:0008105 "asymmetric protein localization" evidence=IGI;IMP]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR001373 InterPro:IPR016157 InterPro:IPR016158
InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557 PROSITE:PS01256
PROSITE:PS50069 SMART:SM00182 SMART:SM00884 UniPathway:UPA00143
GO:GO:0005634 GO:GO:0009792 GO:GO:0005737 GO:GO:0007067
GO:GO:0008595 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0016567
GO:GO:0008105 GO:GO:0030261 eggNOG:COG5647 GO:GO:0008054
SUPFAM:SSF75632 GO:GO:0031461 InterPro:IPR016159 SUPFAM:SSF74788
GO:GO:0042078 GO:GO:0007138 GeneTree:ENSGT00550000074299
HOGENOM:HOG000176713 EMBL:U58084 EMBL:Z92822 PIR:C88618 PIR:T27884
RefSeq:NP_001023007.1 RefSeq:NP_001023008.1 RefSeq:NP_001023009.1
RefSeq:NP_499825.3 UniGene:Cel.21341 ProteinModelPortal:Q17390
SMR:Q17390 IntAct:Q17390 MINT:MINT-4507382 STRING:Q17390
PaxDb:Q17390 PRIDE:Q17390 EnsemblMetazoa:ZK520.4a GeneID:176806
KEGG:cel:CELE_ZK520.4 UCSC:ZK520.4a CTD:35420 WormBase:ZK520.4a
WormBase:ZK520.4b WormBase:ZK520.4c WormBase:ZK520.4d
InParanoid:Q9NA22 KO:K03870 OMA:VMLDYVE NextBio:894074
ArrayExpress:Q17390 GO:GO:0051232 GO:GO:0051759 Uniprot:Q17390
Length = 850
Score = 419 (152.6 bits), Expect = 5.4e-66, Sum P(2) = 5.4e-66
Identities = 102/334 (30%), Positives = 174/334 (52%)
Query: 7 YEKDFEEHMLQDTGAYYSRKASNWILEDSCPEYMIKAEECLKKERDRVSHYLHSSSEPKL 66
Y++ FE+ +L DT YYS A + + SC EYM + L++E R YLH SS K+
Sbjct: 295 YQESFEKPLLTDTEQYYSALAQKMLTDLSCSEYMEQVIVLLEQEEMRAKKYLHESSVEKV 354
Query: 67 VEKVQHELLVVYATELLEKEQSGCRALLREDKVEDLSRMYRLYHKIPKGLEPVANVFKQH 126
+ Q ++ + +L + C L+ ++ +DL MYRL I GL + F+++
Sbjct: 355 ITLCQKVMIKAHKDKL----HAVCHDLITNEENKDLRNMYRLLKPIQAGLSVMVKEFEEY 410
Query: 127 ITAEGTVLVQQAEDAATNQGGSSGAVQEQVLIRKIIELHDKYMEYVTNCFINHTLFHKAL 186
+ +G +A + G + V +Q + ++ +++K+ + T F++ F L
Sbjct: 411 VKKKGL-------EAVSRLTGEN--VPQQ-FVENVLRVYNKFNDMKTAVFMDDGEFSSGL 460
Query: 187 KEAFEIFCNKAVGGSS---SSELLATFCDNILKKGGNEKLSDEAIEETLEKVVKLLAYIS 243
+A + N G S +SE LA + D +LKK + LS+ +E L+ + + YI
Sbjct: 461 DKALQGVVNSKEPGQSVPKASERLARYTDGLLKKS-TKGLSETDLEAKLDSAIVIFRYIE 519
Query: 244 DKDLFAEFYRKKLARRLLFDRSANDDHERSILTKLKQQCGGQFTSKMEGMVTDLTLAREN 303
DKD+F +FY K LA RL+ S + D E ++ KLKQ CG +FTSK+ M TD+ L++E
Sbjct: 520 DKDIFQKFYSKMLANRLIASTSISMDAEELMINKLKQACGYEFTSKLSRMFTDIGLSQEL 579
Query: 304 QTSFEEYLSNNQNAHPGIDLSVT---VLTTGFWP 334
+F++++++ + P + T +L G WP
Sbjct: 580 SNNFDKHIADIKTVQPDVKFVPTQTMILQAGSWP 613
Score = 288 (106.4 bits), Expect = 5.4e-66, Sum P(2) = 5.4e-66
Identities = 64/224 (28%), Positives = 120/224 (53%)
Query: 339 SDLNLPSEMVKCVEVFKGFYETKTKHRKLTWIYSLGQCNINGKFEQKNIELIVSTYQAAT 398
++ +LP + ++ F+ FY K RKLTW++++ Q ++ + K + YQ A
Sbjct: 632 ANFHLPRILQPVIQEFEKFYTGKHNGRKLTWLFNMSQGDVRLTYLDKQYVAQMYVYQMAA 691
Query: 399 LLLFNTSDRLSYSEIMTQLNLTHDDLVRLLHSLSCAKYKILLKEPNTKTISQSDHFEFNS 458
LL F D + +I ++ ++ D L++ + ++ + L + + ++ N
Sbjct: 692 LLCFERRDAILVKDIGEEIGVSGDYLLKTIRTI----LDVTLLTCDDQNLTADSLVRLNM 747
Query: 459 KFTDRMRRIKIPLPPVD-----ERKKIVEDVDKDRRYAIDAALVRIMKSRKVLGHQQLVS 513
T + + ++ P V+ E++ + V +DR+Y ++ A+VRIMK+RKVL H LV+
Sbjct: 748 SMTSKRMKFRLQAPQVNKAVEKEQEAVANTVSQDRKYYMECAIVRIMKTRKVLKHNALVT 807
Query: 514 ECVEQLSRMFKPDIKAIKKRMEDLITRDYLERDKENPNMFRYLA 557
E ++Q F PD+ IKK +EDLI + Y++R +N ++YLA
Sbjct: 808 EIMDQTKGRFSPDVPFIKKSIEDLIEKMYIQRTDQNDE-YQYLA 850
>UNIPROTKB|Q17390 [details] [associations]
symbol:cul-2 "Cullin-2" species:6239 "Caenorhabditis
elegans" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR001373 InterPro:IPR016157 InterPro:IPR016158
InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557 PROSITE:PS01256
PROSITE:PS50069 SMART:SM00182 SMART:SM00884 UniPathway:UPA00143
GO:GO:0005634 GO:GO:0009792 GO:GO:0005737 GO:GO:0007067
GO:GO:0008595 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0016567
GO:GO:0008105 GO:GO:0030261 eggNOG:COG5647 GO:GO:0008054
SUPFAM:SSF75632 GO:GO:0031461 InterPro:IPR016159 SUPFAM:SSF74788
GO:GO:0042078 GO:GO:0007138 GeneTree:ENSGT00550000074299
HOGENOM:HOG000176713 EMBL:U58084 EMBL:Z92822 PIR:C88618 PIR:T27884
RefSeq:NP_001023007.1 RefSeq:NP_001023008.1 RefSeq:NP_001023009.1
RefSeq:NP_499825.3 UniGene:Cel.21341 ProteinModelPortal:Q17390
SMR:Q17390 IntAct:Q17390 MINT:MINT-4507382 STRING:Q17390
PaxDb:Q17390 PRIDE:Q17390 EnsemblMetazoa:ZK520.4a GeneID:176806
KEGG:cel:CELE_ZK520.4 UCSC:ZK520.4a CTD:35420 WormBase:ZK520.4a
WormBase:ZK520.4b WormBase:ZK520.4c WormBase:ZK520.4d
InParanoid:Q9NA22 KO:K03870 OMA:VMLDYVE NextBio:894074
ArrayExpress:Q17390 GO:GO:0051232 GO:GO:0051759 Uniprot:Q17390
Length = 850
Score = 419 (152.6 bits), Expect = 5.4e-66, Sum P(2) = 5.4e-66
Identities = 102/334 (30%), Positives = 174/334 (52%)
Query: 7 YEKDFEEHMLQDTGAYYSRKASNWILEDSCPEYMIKAEECLKKERDRVSHYLHSSSEPKL 66
Y++ FE+ +L DT YYS A + + SC EYM + L++E R YLH SS K+
Sbjct: 295 YQESFEKPLLTDTEQYYSALAQKMLTDLSCSEYMEQVIVLLEQEEMRAKKYLHESSVEKV 354
Query: 67 VEKVQHELLVVYATELLEKEQSGCRALLREDKVEDLSRMYRLYHKIPKGLEPVANVFKQH 126
+ Q ++ + +L + C L+ ++ +DL MYRL I GL + F+++
Sbjct: 355 ITLCQKVMIKAHKDKL----HAVCHDLITNEENKDLRNMYRLLKPIQAGLSVMVKEFEEY 410
Query: 127 ITAEGTVLVQQAEDAATNQGGSSGAVQEQVLIRKIIELHDKYMEYVTNCFINHTLFHKAL 186
+ +G +A + G + V +Q + ++ +++K+ + T F++ F L
Sbjct: 411 VKKKGL-------EAVSRLTGEN--VPQQ-FVENVLRVYNKFNDMKTAVFMDDGEFSSGL 460
Query: 187 KEAFEIFCNKAVGGSS---SSELLATFCDNILKKGGNEKLSDEAIEETLEKVVKLLAYIS 243
+A + N G S +SE LA + D +LKK + LS+ +E L+ + + YI
Sbjct: 461 DKALQGVVNSKEPGQSVPKASERLARYTDGLLKKS-TKGLSETDLEAKLDSAIVIFRYIE 519
Query: 244 DKDLFAEFYRKKLARRLLFDRSANDDHERSILTKLKQQCGGQFTSKMEGMVTDLTLAREN 303
DKD+F +FY K LA RL+ S + D E ++ KLKQ CG +FTSK+ M TD+ L++E
Sbjct: 520 DKDIFQKFYSKMLANRLIASTSISMDAEELMINKLKQACGYEFTSKLSRMFTDIGLSQEL 579
Query: 304 QTSFEEYLSNNQNAHPGIDLSVT---VLTTGFWP 334
+F++++++ + P + T +L G WP
Sbjct: 580 SNNFDKHIADIKTVQPDVKFVPTQTMILQAGSWP 613
Score = 288 (106.4 bits), Expect = 5.4e-66, Sum P(2) = 5.4e-66
Identities = 64/224 (28%), Positives = 120/224 (53%)
Query: 339 SDLNLPSEMVKCVEVFKGFYETKTKHRKLTWIYSLGQCNINGKFEQKNIELIVSTYQAAT 398
++ +LP + ++ F+ FY K RKLTW++++ Q ++ + K + YQ A
Sbjct: 632 ANFHLPRILQPVIQEFEKFYTGKHNGRKLTWLFNMSQGDVRLTYLDKQYVAQMYVYQMAA 691
Query: 399 LLLFNTSDRLSYSEIMTQLNLTHDDLVRLLHSLSCAKYKILLKEPNTKTISQSDHFEFNS 458
LL F D + +I ++ ++ D L++ + ++ + L + + ++ N
Sbjct: 692 LLCFERRDAILVKDIGEEIGVSGDYLLKTIRTI----LDVTLLTCDDQNLTADSLVRLNM 747
Query: 459 KFTDRMRRIKIPLPPVD-----ERKKIVEDVDKDRRYAIDAALVRIMKSRKVLGHQQLVS 513
T + + ++ P V+ E++ + V +DR+Y ++ A+VRIMK+RKVL H LV+
Sbjct: 748 SMTSKRMKFRLQAPQVNKAVEKEQEAVANTVSQDRKYYMECAIVRIMKTRKVLKHNALVT 807
Query: 514 ECVEQLSRMFKPDIKAIKKRMEDLITRDYLERDKENPNMFRYLA 557
E ++Q F PD+ IKK +EDLI + Y++R +N ++YLA
Sbjct: 808 EIMDQTKGRFSPDVPFIKKSIEDLIEKMYIQRTDQNDE-YQYLA 850
>UNIPROTKB|F1RUR7 [details] [associations]
symbol:CUL2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0031462 "Cul2-RING ubiquitin ligase complex"
evidence=IEA] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006511 SUPFAM:SSF75632
GO:GO:0031462 InterPro:IPR016159 SUPFAM:SSF74788
GeneTree:ENSGT00550000074299 OMA:SECINYL EMBL:CU914378
Ensembl:ENSSSCT00000012151 Uniprot:F1RUR7
Length = 510
Score = 665 (239.2 bits), Expect = 2.5e-65, P = 2.5e-65
Identities = 159/520 (30%), Positives = 261/520 (50%)
Query: 47 LKKERDRVSHYLHSSSEPKLVEKVQHELLVVYATELLEKEQSGCRALLREDKVEDLSRMY 106
LK E R YLH SS K++ + Q ++ + + L E C ++R++K D++ MY
Sbjct: 8 LKDEEIRCRKYLHPSSYTKVIHECQQRMVADHL-QFLHAE---CHNIIRQEKKNDMANMY 63
Query: 107 RLYHKIPKGLEPVANVFKQHITAEGTVLVQQAEDAATNQGGSSGAVQEQVLIRKIIELHD 166
L + GL + + HI EG +A T + + + ++E+H
Sbjct: 64 VLLRAVSTGLPHMIQELQNHIHDEGL----RATSNLTQEN------MPTLFVESVLEVHG 113
Query: 167 KYMEYVTNCFINHTLFHKALKEAFEIFCNKAVGGS--SSSELLATFCDNILKKGGNEKLS 224
K+++ + F AL +A N S + ELLA +CDN+LKK + ++
Sbjct: 114 KFVQLINTVLNGDQHFMSALDKALTSVVNYREPKSVCKAPELLAKYCDNLLKKSA-KGMT 172
Query: 225 DEAIEETLEKVVKLLAYISDKDLFAEFYRKKLARRLLFDRSANDDHERSILTKLKQQCGG 284
+ +E+ L + + YI DKD+F +FY + LA+RL+ S + D E +++ KLKQ CG
Sbjct: 173 ENEVEDKLTSFITVFKYIDDKDVFQKFYARMLAKRLIHGLSMSMDSEEAMINKLKQACGY 232
Query: 285 QFTSKMEGMVTDLTLARENQTSFEEYLSNNQNAHP-GIDLSVTVLTTGFWPSYK--SSDL 341
+FTSK+ M TD++++ + F ++ N GI + VL G WP + SS
Sbjct: 233 EFTSKLHRMYTDMSVSADLNNKFNNFIKNQDTVIDLGISFQIYVLQAGAWPLTQAPSSTF 292
Query: 342 NLPSEMVKCVEVFKGFYETKTKHRKLTWIYSLGQCNINGKFEQKNIELIVSTYQAATLLL 401
+P E+ K V++F+ FY RKLTW++ L + + K +V+TYQ A LL
Sbjct: 293 AIPQELEKSVQMFELFYSQHFSGRKLTWLHYLCTGEVKMNYLGKPYVAMVTTYQMAVLLA 352
Query: 402 FNTSDRLSYSEIMTQLNLTHDDLVRLLHSLSCAKYKILLKEPNTKTISQSDHFEFNSKFT 461
FN S+ +SY E+ + +L + + SL K++ + + I F N F+
Sbjct: 353 FNNSETVSYKELQDSTQMNEKELTKTIKSL--LDVKMINHDSEKEDIDAESSFSLNMNFS 410
Query: 462 DRMRRIKIPLPPVDERKKIVED----VDKDRRYAIDAALVRIMKSRKVLGHQQLVSECVE 517
+ + KI + + +E VD+DR+ + AA+VRIMK+RKVL H L+ E +
Sbjct: 411 SKRTKFKITTSMQKDTPQEMEQTRSAVDEDRKMYLQAAIVRIMKARKVLRHNALIQEVIS 470
Query: 518 QLSRMFKPDIKAIKKRMEDLITRDYLERDKENPNMFRYLA 557
Q F P I IKK +E LI + Y+ER + + + + Y+A
Sbjct: 471 QSRARFNPSISMIKKCIEVLIDKQYIERSQASADEYSYVA 510
>DICTYBASE|DDB_G0278991 [details] [associations]
symbol:culE "cullin E" species:44689 "Dictyostelium
discoideum" [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0031461 "cullin-RING ubiquitin ligase complex"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0016567 "protein ubiquitination"
evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR001373 InterPro:IPR016158 InterPro:IPR019559
Pfam:PF00888 Pfam:PF10557 PROSITE:PS01256 PROSITE:PS50069
SMART:SM00182 SMART:SM00884 UniPathway:UPA00143
dictyBase:DDB_G0278991 GenomeReviews:CM000152_GR EMBL:AAFI02000026
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0016567 GO:GO:0006511
eggNOG:COG5647 SUPFAM:SSF75632 GO:GO:0031461 InterPro:IPR016159
SUPFAM:SSF74788 HSSP:Q9JLV5 RefSeq:XP_641893.1
ProteinModelPortal:Q54XF7 PRIDE:Q54XF7 EnsemblProtists:DDB0266744
GeneID:8621819 KEGG:ddi:DDB_G0278991 OMA:AETLMIN Uniprot:Q54XF7
Length = 750
Score = 637 (229.3 bits), Expect = 2.3e-62, P = 2.3e-62
Identities = 170/575 (29%), Positives = 305/575 (53%)
Query: 3 QMDSYEKDFEEHMLQDTGAYYSRKASNWILEDSCPEYMIKAEECLKKERDRVSHYLHSSS 62
+++ Y+ FE+ LQ+T +Y +++++I ++ EYM +++E +RV+ Y+ S+
Sbjct: 189 KLEIYQSCFEQQFLQETETFYKAESADFIEKNGVCEYMRHVYNRIEQETNRVNQYMPIST 248
Query: 63 EPKLVEKVQHELLVVYATELLEKEQSGCRALLREDKVEDLSRMYRLYHKIPKGLEPVANV 122
KL + + + L+ Y + K +L EDK DL MY L ++ L P+ N+
Sbjct: 249 LEKLTKILNNVLISNYKEQFASKFLD----ILIEDKSSDLVMMYSLLSRV-NHLTPLKNI 303
Query: 123 FKQHITAEGTVLVQQAEDAATNQGGSSGAVQEQVLIRKIIELHDKYMEYVTNCFINHTLF 182
F I +EG +++ E +N + QVLI +++++ ++ + C+ N T F
Sbjct: 304 FSDFIKSEG---LKEIE---SNL--KEAQEKPQVLISILLKIYSRFNIMIKECYGNDTDF 355
Query: 183 HKALKEAFEIFCNKAVGG-------SSSSELLATFCDNILKKGGNEKLSDEA-IEETLEK 234
A+ ++F I N+ S+ +L+ FCD IL+KG + +SDEA +E+ L +
Sbjct: 356 TTAMDKSFSILVNENPASYDPKKKESNIPVVLSKFCDQILRKGPHH-ISDEAELEKKLTE 414
Query: 235 VVKLLAYISDKDLFAEFYRKKLARRLLFDRSANDDHERSILTKLKQQCGGQFTSKMEGMV 294
V L Y+ DKD+F Y+K L++RL+ D SA++D E ++ KLK G + +K+ M+
Sbjct: 415 AVCLFKYLPDKDIFMLNYQKMLSKRLVEDLSASEDAETLMINKLKNYQGFDYCTKLTRMI 474
Query: 295 TDLTLARENQTSFEEYLSNNQNAHPGIDLSVTVLTTGFWP---SYKSSDLNLPSEMVKCV 351
TD+ L ++ +F+ +L+ P + VLT G W ++ PSEM+ +
Sbjct: 475 TDMRLCKDININFQNHLNEKSLTLP-YQFNFYVLTNGSWTLTNKQTATPFKPPSEMLSSI 533
Query: 352 EVFKGFYETKTKHRKLTWIYSLGQCNINGKFEQKNI-ELIVSTYQAATLLLFNTSDRLSY 410
F+ FY+ + R LT++Y + +++ + + I +L + YQ A LL+FN +D+++
Sbjct: 534 TYFESFYKKSYQGRVLTFLYDFSRADVDSRQAKGKIYKLTTTAYQMAILLMFNGADKITR 593
Query: 411 SEIMTQLNLTHDDLVRLLHSLSCAKYKIL-LKEPNTKTISQSDHFEFNSKFTDRMRRIKI 469
I + L D+ L L+ K I+ EP+ K + F NSKF+ + ++
Sbjct: 594 FLINDTIGL--DETSIRLPLLALIKTGIIECSEPSFKNWNNDTEFTVNSKFSSKKMKVSC 651
Query: 470 PLP-PVDERKK------IVE-DVDKDRRYAIDAALVRIMKSRKVLGHQQLVSECVEQLSR 521
+ + E K+ + E +++K+R + + AA+VRIMKS+K + H L E Q+S+
Sbjct: 652 NIAVQIGETKQSEGQQTVSEQEIEKERFFKLQAAIVRIMKSKKTMTHNDLTVETTTQVSK 711
Query: 522 MFKPDIKAIKKRMEDLITRDYLERDKE-NPNMFRY 555
F P I AIKK +E LI ++Y+ R + NP+ +Y
Sbjct: 712 WFTPKITAIKKAIEYLIDQEYIRRTTDDNPSARKY 746
>POMBASE|SPAC3A11.08 [details] [associations]
symbol:pcu4 "cullin 4" species:4896 "Schizosaccharomyces
pombe" [GO:0000070 "mitotic sister chromatid segregation"
evidence=IMP] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IMP] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA;TAS] [GO:0005634
"nucleus" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0006283 "transcription-coupled nucleotide-excision repair"
evidence=IMP] [GO:0006348 "chromatin silencing at telomere"
evidence=IMP] [GO:0006974 "response to DNA damage stimulus"
evidence=IMP] [GO:0007535 "donor selection" evidence=TAS]
[GO:0008156 "negative regulation of DNA replication" evidence=IMP]
[GO:0016567 "protein ubiquitination" evidence=IDA] [GO:0030466
"chromatin silencing at silent mating-type cassette" evidence=IMP]
[GO:0030702 "chromatin silencing at centromere" evidence=IMP]
[GO:0031048 "chromatin silencing by small RNA" evidence=IMP]
[GO:0031060 "regulation of histone methylation" evidence=IMP]
[GO:0031507 "heterochromatin assembly" evidence=IMP] [GO:0031618
"nuclear centromeric heterochromatin" evidence=TAS] [GO:0031625
"ubiquitin protein ligase binding" evidence=IEA] [GO:0032876
"negative regulation of DNA endoreduplication" evidence=IMP]
[GO:0034613 "cellular protein localization" evidence=IMP]
[GO:0042787 "protein ubiquitination involved in ubiquitin-dependent
protein catabolic process" evidence=IGI] [GO:0043494 "CLRC
ubiquitin ligase complex" evidence=IDA] [GO:0045836 "positive
regulation of meiosis" evidence=IGI] [GO:0051570 "regulation of
histone H3-K9 methylation" evidence=IMP] [GO:0008180 "signalosome"
evidence=IDA] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
UniPathway:UPA00143 PomBase:SPAC3A11.08 GO:GO:0005829 EMBL:CU329670
GO:GO:0034613 GenomeReviews:CU329670_GR Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0006351 GO:GO:0030466 GO:GO:0000122
GO:GO:0030702 GO:GO:0000070 GO:GO:0006348 GO:GO:0031048
GO:GO:0051570 GO:GO:0004842 GO:GO:0045836 eggNOG:COG5647
SUPFAM:SSF75632 GO:GO:0032876 GO:GO:0042787 GO:GO:0031507
GO:GO:0031618 InterPro:IPR016159 SUPFAM:SSF74788 GO:GO:0006283
GO:GO:0007535 KO:K10609 GO:GO:0043494 EMBL:AB017029 EMBL:AB027893
PIR:T43408 RefSeq:NP_594195.1 ProteinModelPortal:O14122
IntAct:O14122 STRING:O14122 EnsemblFungi:SPAC3A11.08.1
GeneID:2543116 KEGG:spo:SPAC3A11.08 OMA:EREDNDI OrthoDB:EOG4DNJCJ
NextBio:20804143 Uniprot:O14122
Length = 734
Score = 613 (220.8 bits), Expect = 8.1e-60, P = 8.1e-60
Identities = 157/531 (29%), Positives = 277/531 (52%)
Query: 54 VSHYLHSSSEPKLVEKVQHELLVVYATELLEKEQSGCRA--LLREDKV--EDLSRMYRLY 109
+S + + S K+ E E L YA LE+E + ++R+ K E + R
Sbjct: 211 LSRFYDTESSQKIQELPLEEYLE-YAMSSLEREDAYVEKFDIVRDKKSIRETVQRCLITS 269
Query: 110 H--KIPKGLEPVANVFKQH----------ITAEGTVLVQQAEDAATNQGGS--SGAVQEQ 155
H + KG+ H E L+Q D + G + ++
Sbjct: 270 HLDTLTKGISQFIEKRDAHSCKLLYALLQFNHETEYLIQPWSDCLVDVGFKLVNDESKDD 329
Query: 156 VLIRKIIELHDKYMEYVTN-CFINHTLFHKALKEAFEIFCNKAVGGS--SSSELLATFCD 212
L+++++ H K+++ V + F++ A+++AFE F N A G + + L+A + D
Sbjct: 330 TLVQELLSFH-KFLQVVVDESFLHDETLSYAMRKAFETFINGAKGSQREAPARLIAKYID 388
Query: 213 NILKKGGNEKLSDEAIEETLEKVVKLLAYISDKDLFAEFYRKKLARRLLFDRSANDDHER 272
+L+ G + + ++E +++ L YI+ KD+F +Y+ +A+RLL ++SA+ +E
Sbjct: 389 YLLRVG-EQASGGKPLKEVFSEILDLFRYIASKDIFEAYYKLDIAKRLLLNKSASAQNEL 447
Query: 273 SILTKLKQQCGGQFTSKMEGMVTDLTLARENQTSFEEYLSNNQNAHPGIDLSVTVLTTGF 332
+L LK+ CG QFT +EGM D+ +++E +SF + + N H DL V VL+ +
Sbjct: 448 MLLDMLKKTCGSQFTHSLEGMFRDVNISKEFTSSFRHSKAAH-NLHR--DLYVNVLSQAY 504
Query: 333 WPSYKSSDLNLPSEMVKCVEVFKGFYETKTKHRKLTWIYSLGQCNINGKFEQKNIELIVS 392
WPSY S + LP +M + ++ F+ FY +K +K++W SLG C + +F N EL +S
Sbjct: 505 WPSYPESHIRLPDDMQQDLDCFEKFYLSKQVGKKISWYASLGHCIVKARFPLGNKELSIS 564
Query: 393 TYQAATLLLFNT---SDRLSYSEIMTQLNLTHDDLVRLLHSLSCAKYKILLKEPNTKTIS 449
+QA LL FN + +SY ++ L+ DL R L SLSCA+ + L+ P +K S
Sbjct: 565 LFQACVLLQFNNCLGGEGISYQDLKKSTELSDIDLTRTLQSLSCARIRPLVMVPKSKKPS 624
Query: 450 QSDHFEFNSKFTDRMRRIKI-PLPPVDERKK---IVEDVDKDRRYAIDAALVRIMKSRKV 505
F N KFTD++ R+KI + +ER++ + E V +DR++ + A++VR+MK ++
Sbjct: 625 PDTMFYVNEKFTDKLYRVKINQIYLKEERQENSDVQEQVVRDRQFELQASIVRVMKQKEK 684
Query: 506 LGHQQLVSECVEQLSRMFKPDIKAIKKRMEDLITRDYLERDKENPNMFRYL 556
+ H LV + + P + +K +E L+ ++YLER E+ +++ Y+
Sbjct: 685 MKHDDLVQYVINNVKDRGIPLVSDVKTAIEKLLEKEYLER--EDNDIYTYV 733
>WB|WBGene00000841 [details] [associations]
symbol:cul-6 species:6239 "Caenorhabditis elegans"
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0031461 "cullin-RING ubiquitin ligase complex"
evidence=IEA] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0040010 "positive regulation of growth rate"
evidence=IMP] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0006974 "response to DNA damage
stimulus" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
[GO:0008340 "determination of adult lifespan" evidence=IMP]
InterPro:IPR001373 InterPro:IPR016157 InterPro:IPR016158
InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557 PROSITE:PS01256
PROSITE:PS50069 SMART:SM00182 SMART:SM00884 GO:GO:0008340
GO:GO:0009792 GO:GO:0040007 GO:GO:0040010 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0006974 GO:GO:0006511 eggNOG:COG5647
SUPFAM:SSF75632 GO:GO:0031461 InterPro:IPR016159 SUPFAM:SSF74788
GeneTree:ENSGT00550000074299 HOGENOM:HOG000176713 EMBL:Z77666
PIR:T23474 RefSeq:NP_502412.1 ProteinModelPortal:Q21346 SMR:Q21346
STRING:Q21346 EnsemblMetazoa:K08E7.7 GeneID:178214
KEGG:cel:CELE_K08E7.7 UCSC:K08E7.7 CTD:178214 WormBase:K08E7.7
InParanoid:Q21346 NextBio:900194 Uniprot:Q21346
Length = 729
Score = 604 (217.7 bits), Expect = 7.3e-59, P = 7.3e-59
Identities = 173/573 (30%), Positives = 285/573 (49%)
Query: 3 QMDSYEKDFEEHMLQDTGAYYSRKASNWILEDSCPEYMIKAEECLKKERDRVSHYLHSSS 62
++D Y+ FE L T +Y ++ N +++ EYMI E L +E R YL S+
Sbjct: 181 ELDIYKVSFEPQFLDATKLFYKQEVLN--SKETVIEYMITVENRLFQEEYRSRRYLGPST 238
Query: 63 EPKLVEKVQHELLVVYATELLEKEQSGCRALLREDKVEDLSRMYRLYHKIPKGLEPVANV 122
L++ + +L+ + L E LL K E L+RMY L ++ GLE +
Sbjct: 239 NDLLIDSCE-SILISDRLKFLHSE---FERLLEARKDEHLTRMYSLCRRVTHGLEDLRVY 294
Query: 123 FKQHITAEGTVLVQQ-AEDAATNQGGSSGAVQEQVLIRKIIELHDKYMEYVTNCFINHTL 181
++ I EG +Q+ A+D+ G +E I K++E+H+ Y + F + L
Sbjct: 295 LEKRILKEGHETLQRLAKDS-----GLKTTPKEY--ITKLLEVHEIYFNLINKAFDRNAL 347
Query: 182 FHKALKEAFEIFCN-KAVG--------GSSSSELLATFCDNILKKGGNEKLSDEAIEETL 232
F ++L +A + F AV + S++ LA +CD +LKK N K+ DE L
Sbjct: 348 FMQSLDKASKDFIEANAVTMLAPEKHRSTRSADYLARYCDQLLKK--NSKVQDET---AL 402
Query: 233 EKVVKLLAYISDKDLFAEFYRKKLARRLLFDRSANDDHERSILTKLKQQCGGQFTSKMEG 292
+K + +L YIS+KD+F +Y+ + R++ + SA+DD E +T L G ++T +
Sbjct: 403 DKALTVLKYISEKDVFQLYYQNWFSERIINNSSASDDAEEKFITNLTATEGLEYTRNLVK 462
Query: 293 MVTDLTLARENQTSFEEYLSNNQNAHPGIDLSVTVLTTGFWPSYKSSDLNLPSEMVKCVE 352
MV D ++++ T F++ + ID +V + TTG WPS + LP E+ ++
Sbjct: 463 MVEDAKISKDLTTEFKDIKTEKS-----IDFNVILQTTGAWPSLDQIKIILPRELSTILK 517
Query: 353 VFKGFYETKTKHRKLTWIYSLGQCNINGK-FEQKNIELIVSTYQAATLLLFNTSDRLSYS 411
F FY R+L W YS + +N K FE+K + IV+ Q TL LFN D +
Sbjct: 518 EFDTFYNASHNGRRLNWAYSQCRGEVNSKAFEKKYV-FIVTASQLCTLYLFNEQDSFTIE 576
Query: 412 EIMTQLNLTHDDLVRLLHSLSCAKYKILLKEP-NTKTISQSDHF-EFNSKFTDRMRRIK- 468
+I + +T ++ SL+ +L+ + N K D N+K+ ++ R+
Sbjct: 577 QISKAIEMTAKSTSAIVGSLNPVIDPVLVVDKGNEKDGYPPDAVVSLNTKYANKKVRVDL 636
Query: 469 ---IPLPPVDERKKIVED-VDKDRRYAIDAALVRIMKSRKVLGHQQLVSECVEQLSRMFK 524
I D V++ V+ DR+Y I A +VRIMK+RK L H L++E + QL F
Sbjct: 637 TTAIKKATADRETDAVQNTVESDRKYEIKACIVRIMKTRKSLTHTLLINEIISQLKSRFT 696
Query: 525 PDIKAIKKRMEDLITRDYLERDKENPNMFRYLA 557
P+++ IK +E LI + Y+ R + N++ YLA
Sbjct: 697 PNVQMIKICIEILIEQLYIRRSENEHNVYEYLA 729
>UNIPROTKB|Q5T2B5 [details] [associations]
symbol:CUL2 "Cullin-2" species:9606 "Homo sapiens"
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0031461 "cullin-RING ubiquitin ligase complex"
evidence=IEA] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0006511 SUPFAM:SSF75632 GO:GO:0031461
InterPro:IPR016159 SUPFAM:SSF74788 HOGENOM:HOG000176713
HOVERGEN:HBG106177 EMBL:AL392046 UniGene:Hs.82919 HGNC:HGNC:2552
ChiTaRS:CUL2 IPI:IPI00642151 SMR:Q5T2B5 Ensembl:ENST00000374742
Ensembl:ENST00000374746 Uniprot:Q5T2B5
Length = 706
Score = 603 (217.3 bits), Expect = 9.3e-59, P = 9.3e-59
Identities = 149/511 (29%), Positives = 248/511 (48%)
Query: 7 YEKDFEEHMLQDTGAYYSRKASNWILEDSCPEYMIKAEECLKKERDRVSHYLHSSSEPKL 66
Y++ FE L +TG YY ++ASN + E +C +YM K LK E R YLH SS K+
Sbjct: 203 YQEIFESPFLTETGEYYKQEASNLLQESNCSQYMEKVLGRLKDEEIRCRKYLHPSSYTKV 262
Query: 67 VEKVQHELLVVYATELLEKEQSGCRALLREDKVEDLSRMYRLYHKIPKGLEPVANVFKQH 126
+ + Q ++ + + L E C ++R++K D++ MY L + GL + + H
Sbjct: 263 IHECQQRMVADHL-QFLHAE---CHNIIRQEKKNDMANMYVLLRAVSTGLPHMIQELQNH 318
Query: 127 ITAEGTVLVQQAEDAATNQGGSSGAVQEQVLIRKIIELHDKYMEYVTNCFINHTLFHKAL 186
I EG +A T + + + ++E+H K+++ + F AL
Sbjct: 319 IHDEGL----RATSNLTQEN------MPTLFVESVLEVHGKFVQLINTVLNGDQHFMSAL 368
Query: 187 KEAFEIFCNKAVGGS--SSSELLATFCDNILKKGGNEKLSDEAIEETLEKVVKLLAYISD 244
+A N S + ELLA +CDN+LKK + +++ +E+ L + + YI D
Sbjct: 369 DKALTSVVNYREPKSVCKAPELLAKYCDNLLKKSA-KGMTENEVEDRLTSFITVFKYIDD 427
Query: 245 KDLFAEFYRKKLARRLLFDRSANDDHERSILTKLKQQCGGQFTSKMEGMVTDLTLARENQ 304
KD+F +FY + LA+RL+ S + D E +++ KLKQ CG +FTSK+ M TD++++ +
Sbjct: 428 KDVFQKFYARMLAKRLIHGLSMSMDSEEAMINKLKQACGYEFTSKLHRMYTDMSVSADLN 487
Query: 305 TSFEEYLSNNQNAHP-GIDLSVTVLTTGFWPSYK--SSDLNLPSEMVKCVEVFKGFYETK 361
F ++ N GI + VL G WP + SS +P E+ K V++F+ FY
Sbjct: 488 NKFNNFIKNQDTVIDLGISFQIYVLQAGAWPLTQAPSSTFAIPQELEKSVQMFELFYSQH 547
Query: 362 TKHRKLTWIYSLGQCNINGKFEQKNIELIVSTYQAATLLLFNTSDRLSYSEIMTQLNLTH 421
RKLTW++ L + + K +V+TYQ A LL FN S+ +SY E+ +
Sbjct: 548 FSGRKLTWLHYLCTGEVKMNYLGKPYVAMVTTYQMAVLLAFNNSETVSYKELQDSTQMNE 607
Query: 422 DDLVRLLHSLSCAKYKILLKEPNTKTISQSDHFEFNSKFTDRMRRIKIPLPPVDERKKIV 481
+L + + SL K++ + + I F N F+ + + KI +K
Sbjct: 608 KELTKTIKSL--LDVKMINHDSEKEDIDAESSFSLNMNFSSKRTKFKI----TTSMQKDT 661
Query: 482 EDVDKDRRYAIDAALVRIMKSRKVLGHQQLV 512
V R + ++ I K +VL +Q +
Sbjct: 662 PQVISQSRARFNPSISMIKKCIEVLIDKQYI 692
>WB|WBGene00000839 [details] [associations]
symbol:cul-4 species:6239 "Caenorhabditis elegans"
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0031461 "cullin-RING ubiquitin ligase complex"
evidence=IEA] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0040010 "positive regulation of growth rate"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0040035
"hermaphrodite genitalia development" evidence=IMP] [GO:0002009
"morphogenesis of an epithelium" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0008340 "determination of adult
lifespan" evidence=IMP] [GO:0006260 "DNA replication" evidence=IMP]
InterPro:IPR001373 InterPro:IPR016157 InterPro:IPR016158
InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557 PROSITE:PS01256
PROSITE:PS50069 SMART:SM00182 SMART:SM00884 UniPathway:UPA00143
GO:GO:0008340 GO:GO:0002009 GO:GO:0040010 GO:GO:0006260
GO:GO:0040011 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0016567
GO:GO:0040035 GO:GO:0006511 eggNOG:COG5647 SUPFAM:SSF75632
GO:GO:0031461 InterPro:IPR016159 SUPFAM:SSF74788
GeneTree:ENSGT00550000074299 KO:K10609 EMBL:FO080734 EMBL:U58086
PIR:T16367 RefSeq:NP_495525.2 ProteinModelPortal:Q17392 SMR:Q17392
IntAct:Q17392 STRING:Q17392 PaxDb:Q17392 EnsemblMetazoa:F45E12.3
GeneID:174198 KEGG:cel:CELE_F45E12.3 UCSC:F45E12.3 CTD:35780
WormBase:F45E12.3 InParanoid:Q17392 OMA:ERIFCSS NextBio:882965
Uniprot:Q17392
Length = 840
Score = 602 (217.0 bits), Expect = 1.2e-58, P = 1.2e-58
Identities = 163/569 (28%), Positives = 287/569 (50%)
Query: 9 KDFEEHMLQDTGAYYSRKASNWILEDSCPEYMIKAEECLKKERDRVSHYLHSSSEPKLVE 68
++F + ++ +Y+ + + + + +C +YM E+ + + V S K V+
Sbjct: 296 EEFAKFLISQLREHYNNERIDKVPKMNCNDYMEYCEDQINRYSQLVKVNFDEPSALKDVQ 355
Query: 69 KVQHELLVVYAT-ELLEKEQSGCRALLREDKVEDLSRMYRLYHKIPKGLEPVANVFKQHI 127
L+ A E+L + L+ D + D+ RM+ L + G + V F +++
Sbjct: 356 ATVTNCLIQQAIPEILTHDFDD---LIDSDNISDIGRMFNLCRQCVGGEDEVRTQFSKYL 412
Query: 128 TAEGTVLVQQAEDAATNQGGSSGAVQEQVLIRKIIELHDKYMEYVTNCF--INHTL-FHK 184
G L+ D V E + +K ++ +T F N + +
Sbjct: 413 KKRGEKLIATCPD--------EDLVSELLAFKKKVDF------IMTGSFKSANDPVKMRQ 458
Query: 185 ALKEAFEIFCNKAVGGSSSSELLATFCDNILKKGGNEKLSDEA-IEETLEKVVKLLAYIS 243
L +AFE F NK V S+EL++ +L N+ +SD+ +++ +++ + L Y+
Sbjct: 459 CLSDAFESFVNKQV--DRSAELISKHFHTLLHSS-NKNVSDDTTLDQMVDEAIVLFRYLR 515
Query: 244 DKDLFAEFYRKKLARRLLFDRSANDDHERSILTKLKQQCGGQFTSKMEGMVTDLTLAREN 303
KD+F +Y++ LA+RL +RSA+ D E+ +L KLK +CG FT K+EGM D+ +
Sbjct: 516 GKDVFEAYYKRGLAKRLFLERSASVDAEKMVLCKLKTECGSAFTYKLEGMFKDMDASENY 575
Query: 304 QTSFEEYLSNNQNAHPGIDLSVTVLTTGFWPSYKSSDLNLPSEMVKCVEVFKGFYETKTK 363
F +YL + N + + V+T +WP+Y + ++N+P EM + ++ FY +
Sbjct: 576 GRLFNQYLEH-MNKEKA-NFTARVITPEYWPTYDTYEINIPKEMRDTLTDYQDFYRVQHG 633
Query: 364 HRKLTWIYSLGQCNINGKFEQK-NIELIVSTYQAATLLLFNTSDRLSYSEIMTQLNLTHD 422
+R + W + L I+ F ELI + YQ LLLFN + + +EI+ +
Sbjct: 634 NRNVKWHHGLASAVISASFRPGCKKELIATMYQTVILLLFNKCETWTVAEIVEHTKILEI 693
Query: 423 DLVRLLHSLSCA--KYKILLK------EPNTKTIS--QSDHFEFNSKFTDRMRRIKIPL- 471
++V+ + +L K K+L + E T+ +++ F NSKFT++ R++I
Sbjct: 694 EVVKNVLALLGGRDKPKVLQRVEGGGSEKKEGTVENLKNEKFVVNSKFTEKRCRVRIAQV 753
Query: 472 ---PPVDERKKIVEDVDKDRRYAIDAALVRIMKSRKVLGHQQLVSECVEQLSRMFKPDIK 528
V+E K++ E+V+ DR+Y IDAA+VRIMK+RK L HQ L++E ++QL F
Sbjct: 754 NIKTAVEETKEVKEEVNSDRQYKIDAAVVRIMKARKQLNHQTLMTELLQQLR--FPVSTA 811
Query: 529 AIKKRMEDLITRDYLERDKENPNMFRYLA 557
IKKR+E LI R+Y+ RD E + + Y+A
Sbjct: 812 DIKKRLESLIEREYISRDPEEASSYNYVA 840
>UNIPROTKB|G4N0J9 [details] [associations]
symbol:MGG_07731 "Cullin-3" species:242507 "Magnaporthe
oryzae 70-15" [GO:0003674 "molecular_function" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND] InterPro:IPR001373
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS50069 SMART:SM00182 SMART:SM00884 EMBL:CM001233
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006511 SUPFAM:SSF75632
GO:GO:0031461 InterPro:IPR016159 SUPFAM:SSF74788 KO:K03869
RefSeq:XP_003712937.1 ProteinModelPortal:G4N0J9
EnsemblFungi:MGG_07731T0 GeneID:2683658 KEGG:mgr:MGG_07731
Uniprot:G4N0J9
Length = 830
Score = 346 (126.9 bits), Expect = 1.5e-58, Sum P(2) = 1.5e-58
Identities = 97/347 (27%), Positives = 172/347 (49%)
Query: 11 FEEHMLQDTGAYYSRKASNWILEDSCPEYMIKAEECLKKERDRVSHYLHSSSEPKLVEKV 70
FE H+L+ + +Y +A + ++ + L +E DR L + S K+ V
Sbjct: 231 FEPHLLEASRTFYRSEALKLLRNGDASIWIRQTHRRLLEEEDRCKTTLSTLSIEKMTRAV 290
Query: 71 QHELLVVYATELLEKEQSGCRALLREDKVEDLSRMYRLYHKI-P------KG-LEPV--- 119
+ EL+ + + L E +G R +L +D+VEDL+ +Y+L ++ P KG L +
Sbjct: 291 EAELISAHLNDFLALENNGLRQMLDDDRVEDLAILYQLVARVDPSKDLLKKGVLNRILAL 350
Query: 120 -ANVFKQHIT-----AEGTVLVQQAEDAATNQGGSSGAVQEQVLIR---KIIELHDKYME 170
A + K T A+G A + +Q S A Q I+ +++L K+
Sbjct: 351 GAEIEKNLSTIDFSVAQGDAAENPAAEKPKSQALSQQAQQTAAAIKWVHDVLDLRAKFDV 410
Query: 171 YVTNCFINHTLFHKALKEAFEIFCNKAVGGSSSSELLATFCDNILKKGGNEKLSDEAIEE 230
F + + F F ++ SSE ++ + D LK+G K SD +
Sbjct: 411 IWEKSFAQDPGLQTTMTKGFSDFIHQF---GRSSEFVSLYIDENLKRGIRGK-SDLEVTA 466
Query: 231 TLEKVVKLLAYISDKDLFAEFYRKKLARRLLFDRSANDDHERSILTKLKQQCGGQFTSKM 290
L++ + ++ Y+ DKDLF +Y+K L RRLL R+++++ E+ ++T ++ + G FTSK
Sbjct: 467 ILDRSIVMIRYLKDKDLFERYYQKHLGRRLLHSRASSEEAEKQLITMMQLELGKHFTSKF 526
Query: 291 EGMVTDLTLARENQTSFEEYLSNNQNA---HPGIDLSVTVLTTGFWP 334
EGM D+T++ E T + E++ + + H IDL+++VLT+ WP
Sbjct: 527 EGMFKDITISEELSTKYGEHIRSLGDVDVHHKPIDLAISVLTSNSWP 573
Score = 329 (120.9 bits), Expect = 1.5e-58, Sum P(2) = 1.5e-58
Identities = 80/185 (43%), Positives = 114/185 (61%)
Query: 384 QKNIELIVSTYQAATLLLFNT---SDRLSYSEIMTQLNLTHDDLVRLLHSLSC-AKYKIL 439
++ EL VSTY L+LFN+ + LS+ +I + ++ DL R L SLS K ++L
Sbjct: 648 ERRYELNVSTYGMVVLMLFNSLEDGETLSFEDIQAETSIPPKDLSRALASLSINPKARVL 707
Query: 440 LKEPNTKTISQSDHFEFNSKFTDRMRRIKIPL----PPV--DERKKIVEDV-DKDRRYAI 492
LK+P TKTI D F FN+ F + +IK P+ V DE ++ ED D+ RR+ I
Sbjct: 708 LKDPATKTIRPGDKFSFNAGFVSKAIKIKAPVINSQSKVEGDEERQRTEDKNDETRRHMI 767
Query: 493 DAALVRIMKSRKVLGHQQLVSECVEQLSRMFKPDIKAIKKRMEDLITRDYLERDKENPNM 552
DAA+VRIMKSRK L H L++E + QL F+PD+ IK R+EDLI R+YLER ++
Sbjct: 768 DAAIVRIMKSRKELAHNALLAEVIGQLVSRFQPDVAMIKTRIEDLIAREYLERLDDSG-- 825
Query: 553 FRYLA 557
++Y+A
Sbjct: 826 YKYMA 830
Score = 236 (88.1 bits), Expect = 2.6e-16, P = 2.6e-16
Identities = 103/420 (24%), Positives = 171/420 (40%)
Query: 102 LSRMYRLYHKIPKGLEPVANVFKQHITAEGTVLVQQAEDAATNQGGSSGAVQEQVLIRKI 161
L+R+ L +I K L + Q AE + A + Q + A + V +
Sbjct: 344 LNRILALGAEIEKNLSTIDFSVAQGDAAENPAAEKPKSQALSQQAQQTAAAIKWV--HDV 401
Query: 162 IELHDKYMEYVTNCFINHTLFHKALKEAFEIFCNKAVGGSSSSELLATFCDNILKKG--G 219
++L K+ F + + F F ++ SSE ++ + D LK+G G
Sbjct: 402 LDLRAKFDVIWEKSFAQDPGLQTTMTKGFSDFIHQF---GRSSEFVSLYIDENLKRGIRG 458
Query: 220 NEKLSDEAIEETLEKVVKLLAYISD--KDLFAEFYRKKLARRLLFDRSANDDHERSILTK 277
L AI + +++ L D + + + ++L A + +
Sbjct: 459 KSDLEVTAILDRSIVMIRYLKD-KDLFERYYQKHLGRRLLHSRASSEEAEKQLITMMQLE 517
Query: 278 LKQQCGGQFTSKMEGMVTDLTLARENQTSFEEYLSNNQNAHPGIDLSVTVLTTGFWP--- 334
L + +F + + L+ + L + H IDL+++VLT+ WP
Sbjct: 518 LGKHFTSKFEGMFKDITISEELSTKYGEHIRS-LGDVDVHHKPIDLAISVLTSNSWPPDV 576
Query: 335 -----------SYKSSDLNLPSEMVKCVEVFKGFYETKTKHRKLTWIYSLGQCNINGKF- 382
+ D N P E+ + + F FY R LTWI S G +I F
Sbjct: 577 MGRPAQVGRGDGPPAVDCNYPPEIKRLQDSFFKFYLKDRSGRVLTWIGSAGSADIKCVFP 636
Query: 383 ----------EQKNIELIVSTYQAATLLLFNT---SDRLSYSEIMTQLNLTHDDLVRLLH 429
++ EL VSTY L+LFN+ + LS+ +I + ++ DL R L
Sbjct: 637 PVKGMSGPLSRERRYELNVSTYGMVVLMLFNSLEDGETLSFEDIQAETSIPPKDLSRALA 696
Query: 430 SLSC-AKYKILLKEPNTKTISQSDHFEFNSKFTDRMRRIKIPLPPVDERKKIVEDVDKDR 488
SLS K ++LLK+P TKTI D F FN+ F + IKI P ++ + K+ D ++ R
Sbjct: 697 SLSINPKARVLLKDPATKTIRPGDKFSFNAGFVSKA--IKIKAPVINSQSKVEGDEERQR 754
>RGD|1310644 [details] [associations]
symbol:Cul2 "cullin 2" species:10116 "Rattus norvegicus"
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
[GO:0030163 "protein catabolic process" evidence=ISO] [GO:0030891
"VCB complex" evidence=IDA] [GO:0031461 "cullin-RING ubiquitin
ligase complex" evidence=IEA] [GO:0031462 "Cul2-RING ubiquitin
ligase complex" evidence=ISO] [GO:0031625 "ubiquitin protein ligase
binding" evidence=IEA;ISO] [GO:0032403 "protein complex binding"
evidence=IPI] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IC] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 RGD:1310644
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006511 SUPFAM:SSF75632
GO:GO:0031461 InterPro:IPR016159 SUPFAM:SSF74788 GO:GO:0030891
IPI:IPI00559025 PRIDE:D4AEE5 Ensembl:ENSRNOT00000021462
UCSC:RGD:1310644 ArrayExpress:D4AEE5 Uniprot:D4AEE5
Length = 706
Score = 591 (213.1 bits), Expect = 1.7e-57, P = 1.7e-57
Identities = 147/511 (28%), Positives = 247/511 (48%)
Query: 7 YEKDFEEHMLQDTGAYYSRKASNWILEDSCPEYMIKAEECLKKERDRVSHYLHSSSEPKL 66
Y+ F L +TG YY ++ASN + E +C +YM K LK E R YLH SS K+
Sbjct: 203 YQGIFVSPFLTETGEYYKQEASNLLQESNCSQYMEKVLGRLKDEEIRCRKYLHPSSYTKV 262
Query: 67 VEKVQHELLVVYATELLEKEQSGCRALLREDKVEDLSRMYRLYHKIPKGLEPVANVFKQH 126
+ + Q ++ + + L E C +++R ++ D++ MY L + GL + ++H
Sbjct: 263 IHECQQRMVADHL-QFLHSE---CHSIIRHERKNDMANMYVLLRAVSSGLPHMIEELQRH 318
Query: 127 ITAEGTVLVQQAEDAATNQGGSSGAVQEQVLIRKIIELHDKYMEYVTNCFINHTLFHKAL 186
I EG +A T + + + ++E+H K+++ + F AL
Sbjct: 319 IHDEGL----RATSNLTQEH------MPTLFVESVLEVHGKFVQLINTVLNGDQHFMSAL 368
Query: 187 KEAFEIFCNKAVGGS--SSSELLATFCDNILKKGGNEKLSDEAIEETLEKVVKLLAYISD 244
+A N S + ELLA +CDN+LKK + +++ +E+ L + + YI D
Sbjct: 369 DKALTSVVNYREPKSVCKAPELLAKYCDNLLKKSA-KGMTENEVEDKLTSFITVFKYIDD 427
Query: 245 KDLFAEFYRKKLARRLLFDRSANDDHERSILTKLKQQCGGQFTSKMEGMVTDLTLARENQ 304
KD+F +FY + LA+RL+ S + D E +++ KLKQ CG +FTSK+ M TD++++ +
Sbjct: 428 KDVFQKFYARMLAKRLIHGLSMSMDSEEAMINKLKQACGYEFTSKLHRMYTDMSVSADLN 487
Query: 305 TSFEEYLSNNQNAHP-GIDLSVTVLTTGFWPSYK--SSDLNLPSEMVKCVEVFKGFYETK 361
F ++ N GI + VL G WP + SS +P E+ K V++F+ FY
Sbjct: 488 NKFNNFIRNQDTVIDLGISFQIYVLQAGAWPLTQAPSSTFAIPQELEKSVQMFELFYSQH 547
Query: 362 TKHRKLTWIYSLGQCNINGKFEQKNIELIVSTYQAATLLLFNTSDRLSYSEIMTQLNLTH 421
RKLTW++ L + + K +V+TYQ A LL FN S+ +SY E+ +
Sbjct: 548 FSGRKLTWLHYLCTGEVKMNYLGKPYVAMVTTYQMAVLLAFNNSETVSYKELQDSTQMNE 607
Query: 422 DDLVRLLHSLSCAKYKILLKEPNTKTISQSDHFEFNSKFTDRMRRIKIPLPPVDERKKIV 481
+L + + SL K++ + + I F N F+ + + KI +K
Sbjct: 608 KELTKTIKSL--LDVKMINHDSEKEDIDAESSFSLNMSFSSKRTKFKI----TTSMQKDT 661
Query: 482 EDVDKDRRYAIDAALVRIMKSRKVLGHQQLV 512
V R + ++ I K +VL +Q +
Sbjct: 662 PQVISQSRARFNPSISMIKKCIEVLIDKQYI 692
>UNIPROTKB|K7GPT4 [details] [associations]
symbol:LOC100739075 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0031461 "cullin-RING ubiquitin ligase complex"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
Gene3D:1.10.10.10 InterPro:IPR011991 SUPFAM:SSF75632
GeneTree:ENSGT00550000074299 EMBL:CU468368
Ensembl:ENSSSCT00000035259 Uniprot:K7GPT4
Length = 278
Score = 583 (210.3 bits), Expect = 1.2e-56, P = 1.2e-56
Identities = 124/280 (44%), Positives = 166/280 (59%)
Query: 282 CGGQFTSKMEGMVTDLTLARENQTSFEEYLSNNQNAHPGIDLSVTVLTTGFWPSYKSSDL 341
CG FTSK+EGM D+ L+++ F++Y+ N QN I+L+V +LT G+WP+Y ++
Sbjct: 2 CGAAFTSKLEGMFKDMELSKDIMIQFKQYMQN-QNVPGNIELTVNILTMGYWPTYVPMEV 60
Query: 342 NLPSEMVKCVEVFKGFYETKTKHRKLTWIYSLGQCNINGKFEQKNIELIVSTYQAATLLL 401
+LP EMVK E+FK FY K RKL W +LG C + +F++ EL VS +Q LL+
Sbjct: 61 HLPPEMVKLQEIFKTFYLGKHSGRKLQWQSTLGHCVLKAEFKEGKKELQVSLFQTLVLLM 120
Query: 402 FNTSDRLSYSEIMTQLNLTHDDLVRLLHSLSCAKYKILLKEPNTKTISQSDHFEFNSKFT 461
FN + S EI + +L R L SL+C K ++L K P K I D F N F
Sbjct: 121 FNEGEEFSLEEIKQATGIEDGELRRTLQSLACGKARVLAKNPKGKDIEDGDKFICNDDFK 180
Query: 462 DRMRRIKIPL----PPVDERKKIVEDVDKDRRYAIDAALVRIMKSRKVLGHQQLVSECVE 517
++ RIKI V+E+ E V +DR+Y IDAA+VRIMK RK L H LVSE
Sbjct: 181 HKLFRIKINQIQMKETVEEQASTTERVFQDRQYQIDAAIVRIMKMRKTLSHNLLVSEVYN 240
Query: 518 QLSRMFKPDIKAIKKRMEDLITRDYLERDKENPNMFRYLA 557
QL KP +KKR+E LI RDY+ERDKENPN + Y+A
Sbjct: 241 QLKFPVKP--ADLKKRIESLIDRDYMERDKENPNQYNYIA 278
>ZFIN|ZDB-GENE-040426-1357 [details] [associations]
symbol:cul4a "cullin 4A" species:7955 "Danio
rerio" [GO:0031625 "ubiquitin protein ligase binding" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0031461 "cullin-RING ubiquitin ligase complex"
evidence=IEA] [GO:0071600 "otic vesicle morphogenesis"
evidence=IMP] [GO:0035118 "embryonic pectoral fin morphogenesis"
evidence=IMP] InterPro:IPR001373 InterPro:IPR016158 Pfam:PF00888
PROSITE:PS50069 SMART:SM00182 ZFIN:ZDB-GENE-040426-1357
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006511 eggNOG:COG5647
SUPFAM:SSF75632 GO:GO:0031461 InterPro:IPR016159 SUPFAM:SSF74788
GO:GO:0035118 KO:K10609 HOVERGEN:HBG003619 CTD:8451 GO:GO:0071600
EMBL:BC054607 IPI:IPI00487530 RefSeq:NP_957321.1 UniGene:Dr.84245
ProteinModelPortal:Q7T2C1 SMR:Q7T2C1 STRING:Q7T2C1 GeneID:394002
KEGG:dre:394002 NextBio:20814969 Uniprot:Q7T2C1
Length = 635
Score = 579 (208.9 bits), Expect = 3.3e-56, P = 3.3e-56
Identities = 147/441 (33%), Positives = 243/441 (55%)
Query: 15 MLQDTGAYYSRKASNWILEDSCPEYMIKAEECLKKERDRVSHYLHSSSEPKLVEKVQHEL 74
ML D Y + L ++ Y + + L +ERD V YLH + +L E +++
Sbjct: 205 MLSDLQVYKDSFEQRF-LSETTRLYAAEGQR-LMQERD-VPEYLHHVAR-RLEE--ENDR 258
Query: 75 LVVYATELLEKEQSGC--RALLREDKVEDLSRMYRLYHKIPKGLEPVANVFKQHITAEG- 131
++ Y + +K + LL E L + R + E + +++ +G
Sbjct: 259 VISYLDQSTQKPLIATVEKQLLGEHMTTILQKGLRTLLDENRVCE-LTLLYELFSKVKGG 317
Query: 132 -TVLVQQAEDAATNQGGSS--GAVQEQVLIRKIIELHDKYMEYVT-NCFINHTLFHKALK 187
T L+Q + + G + +++ +++++++ D+ M+ VT +CF + F A+K
Sbjct: 318 LTALLQSWREYIKSVGAETVCSPERDREMVQELLDFKDQ-MDSVTQSCFQRNESFINAMK 376
Query: 188 EAFEIFCNKAVGGSSSSELLATFCDNILKKGGNEKLSDEAIEETLEKVVKLLAYISDKDL 247
EAFE F N+ + +EL+A + D+ L+ GN++ ++E +E L+K++ + +I KD+
Sbjct: 377 EAFENFINQRP--NKPAELIAKYVDSKLR-AGNKEATEEELERILDKIMIIFRFIHGKDV 433
Query: 248 FAEFYRKKLARRLLFDRSANDDHERSILTKLKQQCGGQFTSKMEGMVTDLTLARENQTSF 307
F FY+K LA+RLL +SA+ D E+S+L+KLK +CG FTSK+EGM D+ L+++ F
Sbjct: 434 FEAFYKKDLAKRLLVGKSASVDAEKSMLSKLKHECGAAFTSKLEGMFKDMELSKDIMIQF 493
Query: 308 EEYLSNNQNAHPGIDLSVTVLTTGFWPSYKSSDLNLPSEMVKCVEVFKGFYETKTKHRKL 367
++Y+ N Q I+L+V +LT G+WPSY D++LP+EMVK EVFK FY K RKL
Sbjct: 494 KQYMQN-QTEPSNIELTVNILTMGYWPSYTPMDVHLPAEMVKLQEVFKLFYLGKHSGRKL 552
Query: 368 TWIYSLGQCNINGKFEQKNIELIVSTYQAATLLLFNTSDRLSYSEIMTQLNLTHDDLVRL 427
W +LG + +F++ EL VS +Q LL+FN SD S EI + +L R
Sbjct: 553 QWQPTLGHAVLKTEFKEGKKELQVSLFQTLVLLMFNESDECSVEEIRVATGIEEGELKRT 612
Query: 428 LHSLSCAKYKILLKEPNTKTI 448
L SL+C K ++L K P K +
Sbjct: 613 LQSLACGKARVLNKTPRGKEV 633
Score = 215 (80.7 bits), Expect = 3.3e-14, P = 3.3e-14
Identities = 53/196 (27%), Positives = 100/196 (51%)
Query: 1 MGQMDSYEKDFEEHMLQDTGAYYSRKASNWILEDSCPEYMIKAEECLKKERDRVSHYLHS 60
+ + Y+ FE+ L +T Y+ + + E PEY+ L++E DRV YL
Sbjct: 206 LSDLQVYKDSFEQRFLSETTRLYAAEGQRLMQERDVPEYLHHVARRLEEENDRVISYLDQ 265
Query: 61 SSEPKLVEKVQHELLVVYATELLEKEQSGCRALLREDKVEDLSRMYRLYHKIPKGLEPVA 120
S++ L+ V+ +LL + T +L+K G R LL E++V +L+ +Y L+ K+ GL +
Sbjct: 266 STQKPLIATVEKQLLGEHMTTILQK---GLRTLLDENRVCELTLLYELFSKVKGGLTALL 322
Query: 121 NVFKQHITAEGTVLVQQAEDAATNQGGSSGAVQEQVLIRKIIELHDKYMEYVTNCFINHT 180
++++I + G V E +++ +++++++ D+ +CF +
Sbjct: 323 QSWREYIKSVGAETVCSPE-------------RDREMVQELLDFKDQMDSVTQSCFQRNE 369
Query: 181 LFHKALKEAFEIFCNK 196
F A+KEAFE F N+
Sbjct: 370 SFINAMKEAFENFINQ 385
>UNIPROTKB|F1P2W9 [details] [associations]
symbol:CUL2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0031461 "cullin-RING ubiquitin ligase complex"
evidence=IEA] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] InterPro:IPR001373 InterPro:IPR016158 Pfam:PF00888
PROSITE:PS50069 SMART:SM00182 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0006511 SUPFAM:SSF75632 GO:GO:0031461 InterPro:IPR016159
SUPFAM:SSF74788 GeneTree:ENSGT00550000074299 EMBL:AADN02000467
EMBL:AADN02000468 EMBL:AADN02000469 IPI:IPI00595196
Ensembl:ENSGALT00000038545 ArrayExpress:F1P2W9 Uniprot:F1P2W9
Length = 687
Score = 576 (207.8 bits), Expect = 6.8e-56, P = 6.8e-56
Identities = 135/430 (31%), Positives = 219/430 (50%)
Query: 7 YEKDFEEHMLQDTGAYYSRKASNWILEDSCPEYMIKAEECLKKERDRVSHYLHSSSEPKL 66
Y++ FE L +TG YY ++ASN + E +C +YM K LK E R YLH SS K+
Sbjct: 231 YQEIFECPFLNETGEYYKQEASNLLQESNCSQYMEKVLGRLKDEEMRCRKYLHPSSYGKV 290
Query: 67 VEKVQHELLVVYATELLEKEQSGCRALLREDKVEDLSRMYRLYHKIPKGLEPVANVFKQH 126
+ + Q ++ + + L E C ++R++K D++ MY L + GL + + H
Sbjct: 291 IHECQQRMVADHL-QFLHAE---CHNIIRQEKRNDMANMYTLLRAVSSGLPHMIQELQNH 346
Query: 127 ITAEGTVLVQQAEDAATNQGGSSGAVQEQVLIRKIIELHDKYMEYVTNCFINHTLFHKAL 186
I EG A +N + Q + ++E+H K+++ + F AL
Sbjct: 347 IHDEGL-------RATSNLSQENMPTQ---FVESVLEVHSKFVQLINTVLNGDQHFMSAL 396
Query: 187 KEAFEIFCNKAVGGS--SSSELLATFCDNILKKGGNEKLSDEAIEETLEKVVKLLAYISD 244
+A N S + ELLA +CDN+LKK + +++ +E+ L + + YI D
Sbjct: 397 DKALTSVVNYREPKSICKAPELLAKYCDNLLKKSA-KGMTENEVEDKLTSFITVFKYIDD 455
Query: 245 KDLFAEFYRKKLARRLLFDRSANDDHERSILTKLKQQCGGQFTSKMEGMVTDLTLARENQ 304
KD+F +FY + LA+RL+ S + D E +++ KLKQ CG +FTSK+ M TD++++ +
Sbjct: 456 KDVFQKFYARMLAKRLIHGLSMSMDSEEAMINKLKQACGYEFTSKLHRMYTDMSVSADLN 515
Query: 305 TSFEEYLSNNQNAHP-GIDLSVTVLTTGFWPSYK--SSDLNLPSEMVKCVEVFKGFYETK 361
F ++ N GI + VL G WP + SS +P E+ K V++F+ FY
Sbjct: 516 NKFNNFIKNQDTIIDLGISFQIYVLQAGAWPLTQAPSSTFAIPQELEKSVQMFELFYSQH 575
Query: 362 TKHRKLTWIYSLGQCNINGKFEQKNIELIVSTYQAATLLLFNTSDRLSYSEIMTQLNLTH 421
RKLTW++ L + + K +V+TYQ A LL FN S+ +SY E+ +
Sbjct: 576 FSGRKLTWLHYLCTGEVKMNYLCKPYVAMVTTYQMAVLLAFNNSETVSYKELQDSTQMNE 635
Query: 422 DDLVRLLHSL 431
+L + + SL
Sbjct: 636 KELTKTIKSL 645
>UNIPROTKB|D4A0H4 [details] [associations]
symbol:Cul2 "Cullin 2 (Predicted), isoform CRA_a"
species:10116 "Rattus norvegicus" [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=IEA] [GO:0031462 "Cul2-RING
ubiquitin ligase complex" evidence=IEA] [GO:0031625 "ubiquitin
protein ligase binding" evidence=IEA] InterPro:IPR001373
InterPro:IPR016157 InterPro:IPR016158 InterPro:IPR019559
Pfam:PF00888 Pfam:PF10557 PROSITE:PS01256 PROSITE:PS50069
SMART:SM00182 SMART:SM00884 RGD:1310644 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0006511 SUPFAM:SSF75632 GO:GO:0031461
InterPro:IPR016159 SUPFAM:SSF74788 GeneTree:ENSGT00550000074299
KO:K03870 CTD:8453 EMBL:CH474030 IPI:IPI00947898
RefSeq:NP_001101887.1 UniGene:Rn.2970 Ensembl:ENSRNOT00000066805
GeneID:361258 KEGG:rno:361258 NextBio:675723 Uniprot:D4A0H4
Length = 725
Score = 567 (204.7 bits), Expect = 6.1e-55, P = 6.1e-55
Identities = 132/410 (32%), Positives = 215/410 (52%)
Query: 164 LHDKYMEYVTNCFINH--TLFHKALKEA---FEIFCNKAVGGS----SSSELLATFCDNI 214
+HD+ + +N H TLF +++ E F N + G S+ + LA +CDN+
Sbjct: 319 IHDEGLRATSNLTQEHMPTLFVESVLEVHGKFVQLINTVLNGDQHFMSALDKLAKYCDNL 378
Query: 215 LKKGGNEKLSDEAIEETLEKVVKLLAYISDKDLFAEFYRKKLARRLLFDRSANDDHERSI 274
LKK + +++ +E+ L + + YI DKD+F +FY + LA+RL+ S + D E ++
Sbjct: 379 LKKSA-KGMTENEVEDKLTSFITVFKYIDDKDVFQKFYARMLAKRLIHGLSMSMDSEEAM 437
Query: 275 LTKLKQQCGGQFTSKMEGMVTDLTLARENQTSFEEYLSNNQNAHP-GIDLSVTVLTTGFW 333
+ KLKQ CG +FTSK+ M TD++++ + F ++ N GI + VL G W
Sbjct: 438 INKLKQACGYEFTSKLHRMYTDMSVSADLNNKFNNFIRNQDTVIDLGISFQIYVLQAGAW 497
Query: 334 PSYK--SSDLNLPSEMVKCVEVFKGFYETKTKHRKLTWIYSLGQCNINGKFEQKNIELIV 391
P + SS +P E+ K V++F+ FY RKLTW++ L + + K +V
Sbjct: 498 PLTQAPSSTFAIPQELEKSVQMFELFYSQHFSGRKLTWLHYLCTGEVKMNYLGKPYVAMV 557
Query: 392 STYQAATLLLFNTSDRLSYSEIMTQLNLTHDDLVRLLHSLSCAKYKILLKEPNTKTISQS 451
+TYQ A LL FN S+ +SY E+ + +L + + SL K++ + + I
Sbjct: 558 TTYQMAVLLAFNNSETVSYKELQDSTQMNEKELTKTIKSL--LDVKMINHDSEKEDIDAE 615
Query: 452 DHFEFNSKFTDRMRRIKIPLPPVDERKKIVED----VDKDRRYAIDAALVRIMKSRKVLG 507
F N F+ + + KI + + +E VD+DR+ + AA+VRIMK+RKVL
Sbjct: 616 SSFSLNMSFSSKRTKFKITTSMQKDTPQELEQTRSAVDEDRKMYLQAAIVRIMKARKVLR 675
Query: 508 HQQLVSECVEQLSRMFKPDIKAIKKRMEDLITRDYLERDKENPNMFRYLA 557
H L+ E + Q F P I IKK +E LI + Y+ER + + + + Y+A
Sbjct: 676 HNALIQEVISQSRARFNPSISMIKKCIEVLIDKQYIERSQASADEYSYVA 725
Score = 190 (71.9 bits), Expect = 2.3e-11, P = 2.3e-11
Identities = 52/204 (25%), Positives = 96/204 (47%)
Query: 7 YEKDFEEHMLQDTGAYYSRKASNWILEDSCPEYMIKAEECLKKERDRVSHYLHSSSEPKL 66
Y+ F L +TG YY ++ASN + E +C +YM K LK E R YLH SS K+
Sbjct: 203 YQGIFVSPFLTETGEYYKQEASNLLQESNCSQYMEKVLGRLKDEEIRCRKYLHPSSYTKV 262
Query: 67 VEKVQHELLVVYATELLEKEQSGCRALLREDKVEDLSRMYRLYHKIPKGLEPVANVFKQH 126
+ + Q ++ + + L E C +++R ++ D++ MY L + GL + ++H
Sbjct: 263 IHECQQRMVADHL-QFLHSE---CHSIIRHERKNDMANMYVLLRAVSSGLPHMIEELQRH 318
Query: 127 ITAEGTVLVQQAEDAATNQGGSSGAVQEQVLIRKIIELHDKYMEYVTNCFINHTLFHKAL 186
I EG +A T + + + ++E+H K+++ + F AL
Sbjct: 319 IHDEGL----RATSNLTQEH------MPTLFVESVLEVHGKFVQLINTVLNGDQHFMSAL 368
Query: 187 KEAFEIFCN----KAVGGSSSSEL 206
+ + +C+ K+ G + +E+
Sbjct: 369 DKLAK-YCDNLLKKSAKGMTENEV 391
>TAIR|locus:2025881 [details] [associations]
symbol:AT1G59790 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0031461 "cullin-RING ubiquitin ligase complex" evidence=IEA]
[GO:0031625 "ubiquitin protein ligase binding" evidence=IEA]
InterPro:IPR001373 Pfam:PF00888 PROSITE:PS01256 PROSITE:PS50069
EMBL:CP002684 GenomeReviews:CT485782_GR EMBL:AC007258 GO:GO:0006511
GO:GO:0031461 InterPro:IPR016159 SUPFAM:SSF74788 KO:K03347
HOGENOM:HOG000176712 IPI:IPI00517906 PIR:H96621 RefSeq:NP_176188.1
UniGene:At.52273 ProteinModelPortal:Q9XIE9 SMR:Q9XIE9 PRIDE:Q9XIE9
EnsemblPlants:AT1G59790.1 GeneID:842272 KEGG:ath:AT1G59790
TAIR:At1g59790 OMA:QNELLVM ProtClustDB:CLSN2679703
Genevestigator:Q9XIE9 Uniprot:Q9XIE9
Length = 374
Score = 552 (199.4 bits), Expect = 2.4e-53, P = 2.4e-53
Identities = 110/184 (59%), Positives = 133/184 (72%)
Query: 1 MGQMDSYEKDFEEHMLQDTGAYYSRKASNWILEDSCPEYMIKAEECLKKERDRVSHYLHS 60
MG ++ YE+DFE MLQDT +YYSRKAS W EDSCP+YMIK EECLK ER+RV+HYLHS
Sbjct: 188 MGTLEKYEEDFESFMLQDTASYYSRKASRWTEEDSCPDYMIKVEECLKMERERVTHYLHS 247
Query: 61 SSEPKLVEKVQHELLVVYATELLEKEQSGCRALLREDKVEDLSRMYRLYHKIPKGLEPVA 120
+EPKLVEK+Q+ELLV+ LE E SG ALLR+DK DLSR+YRLY IPK L VA
Sbjct: 248 ITEPKLVEKIQNELLVMVTKNRLENEHSGFSALLRDDKKNDLSRIYRLYLPIPKRLGRVA 307
Query: 121 NVFKQHITAEGTVLVQQAEDAATNQGGSSGAVQEQVLIRKIIELHDKYMEYVTNCFINHT 180
++FK+HIT EG L++QA+D TNQ +IELH+K++ YV CF NHT
Sbjct: 308 DLFKKHITEEGNALIKQADDKTTNQ--------------LLIELHNKFIVYVIECFQNHT 353
Query: 181 LFHK 184
LFHK
Sbjct: 354 LFHK 357
>UNIPROTKB|F1N7B5 [details] [associations]
symbol:CUL5 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0031466 "Cul5-RING ubiquitin ligase complex"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006511 SUPFAM:SSF75632
GO:GO:0031466 InterPro:IPR016159 SUPFAM:SSF74788
GeneTree:ENSGT00550000074299 OMA:EVTTFQM EMBL:DAAA02040193
EMBL:DAAA02040192 IPI:IPI00924344 Ensembl:ENSBTAT00000061240
ArrayExpress:F1N7B5 Uniprot:F1N7B5
Length = 759
Score = 419 (152.6 bits), Expect = 4.0e-50, Sum P(2) = 4.0e-50
Identities = 118/453 (26%), Positives = 219/453 (48%)
Query: 3 QMDSYEKDFEEHMLQDTGAYYSRKASNWILEDSCPEYMIKAEECLKKERDRVSHYLHSSS 62
++ Y +FE+ L T +Y +A +++ ++ YM A+ LK+E R YL +
Sbjct: 173 KLQIYRDNFEKAYLDSTERFYRTQAPSYLQQNGVQNYMKYADAKLKEEEKRALRYLETRR 232
Query: 63 EPKLVEKVQHELLVVYATELLEKEQSGCRALLREDKVEDLSRMYRLYHKIPKGLEPVANV 122
E VE + + T E + C+ +++ ++ E L M+ L K+P G+EP+
Sbjct: 233 ECNSVEALMECCVNALVTSFKETILAECQGMIKRNETEKLHLMFSLMDKVPNGIEPMLKD 292
Query: 123 FKQHITAEGTV-LVQQAEDAATNQGGSSGAVQEQVLIRKIIELHDKYMEYVTNCFINHTL 181
++HI + G +V AE T+ + + +++ L +++ + V F +
Sbjct: 293 LEEHIISAGLADMVAAAETITTDS---------EKYVEQLLTLFNRFSKLVKEAFQDDPR 343
Query: 182 FHKALKEAFEIFCN-------------KAVG-----GSSSSELLATFCDNILKKGG-NEK 222
F A +A++ N K VG S ELLA +CD +L+K ++K
Sbjct: 344 FLTARDKAYKAVVNDATIFKLELPLKQKGVGLKTQPESKCPELLANYCDMLLRKTPLSKK 403
Query: 223 LSDEAIEETLEKVVKLLAYISDKDLFAEFYRKKLARRLLFDRSANDDHERSILTKLKQQ- 281
L+ E IE L++V+ +L Y+ +KD+F +++ L RRL+ D SA+ + E +++ L++
Sbjct: 404 LTSEEIEAKLKEVLLVLKYVQNKDVFMRYHKAHLTRRLILDISADSEIEENMVEWLREVG 463
Query: 282 CGGQFTSKMEGMVTDLTLARENQTSFEEYLSNNQNAHPGIDLSVTVLTTGFWP-SYKSSD 340
+ +K+ M D+ ++ + +F+E NN+ A P +++ +L G W S +
Sbjct: 464 MPADYVNKLARMFQDIKVSEDLNQAFKEMHKNNKLALPADSVNIKILNAGAWSRSSEKVF 523
Query: 341 LNLPSEMVKCVEVFKGFYETKTKHRKLTWIYSLGQCNINGKFEQKNIELIVSTYQAATLL 400
++LP+E+ + + FY+ RKL W + + I K E +L V+T+Q A L
Sbjct: 524 VSLPTELEDLIPEVEEFYKKNHSGRKLHWHHLMSNGIITFKNEVGQYDLEVTTFQLAVLF 583
Query: 401 LFNTSDR--LSYSEIMTQLNLTHDDLVRLLHSL 431
+N R +S+ + L +L R L SL
Sbjct: 584 AWNQRPREKISFENLKLATELPDAELRRTLWSL 616
Score = 134 (52.2 bits), Expect = 4.0e-50, Sum P(2) = 4.0e-50
Identities = 45/137 (32%), Positives = 69/137 (50%)
Query: 435 KYKILLKEPNT---KTISQSDHFEFNSKFT-----DRMRRIKIPL----PPVDERKKIVE 482
K ++LL EP K ++ F N +F+ +R KI L ER + E
Sbjct: 623 KRQVLLYEPQVNSPKDFTEGTLFSVNQEFSLIKNAKVQKRGKINLIGRLQLTTERMREEE 682
Query: 483 D--VDKDRRYAIDAALVRIMKSRKVLGHQQLVSECVEQLSRMFKPDIKAIKKRMEDLITR 540
+ + + R A+++IMK RK + + QL +E VE L MF P K IK+++E LI
Sbjct: 683 NEGIVQLRILRTQEAIIQIMKMRKKISNAQLQTELVEILKNMFLPQKKMIKEQIEWLIEH 742
Query: 541 DYLERDKENPNMFRYLA 557
Y+ RD+ + N F Y+A
Sbjct: 743 KYIRRDESDINTFIYMA 759
>UNIPROTKB|J9PAX0 [details] [associations]
symbol:CUL5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0031461 "cullin-RING ubiquitin ligase complex"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006511 SUPFAM:SSF75632
GO:GO:0031461 InterPro:IPR016159 SUPFAM:SSF74788
GeneTree:ENSGT00550000074299 OMA:EVTTFQM EMBL:AAEX03003515
Ensembl:ENSCAFT00000043293 Uniprot:J9PAX0
Length = 759
Score = 419 (152.6 bits), Expect = 4.0e-50, Sum P(2) = 4.0e-50
Identities = 118/453 (26%), Positives = 219/453 (48%)
Query: 3 QMDSYEKDFEEHMLQDTGAYYSRKASNWILEDSCPEYMIKAEECLKKERDRVSHYLHSSS 62
++ Y +FE+ L T +Y +A +++ ++ YM A+ LK+E R YL +
Sbjct: 173 KLQIYRDNFEKAYLDSTERFYRTQAPSYLQQNGVQNYMKYADAKLKEEEKRALRYLETRR 232
Query: 63 EPKLVEKVQHELLVVYATELLEKEQSGCRALLREDKVEDLSRMYRLYHKIPKGLEPVANV 122
E VE + + T E + C+ +++ ++ E L M+ L K+P G+EP+
Sbjct: 233 ECNSVEALMECCVNALVTSFKETILAECQGMIKRNETEKLHLMFSLMDKVPNGIEPMLKD 292
Query: 123 FKQHITAEGTV-LVQQAEDAATNQGGSSGAVQEQVLIRKIIELHDKYMEYVTNCFINHTL 181
++HI + G +V AE T+ + + +++ L +++ + V F +
Sbjct: 293 LEEHIISAGLADMVAAAETITTDS---------EKYVEQLLTLFNRFSKLVKEAFQDDPR 343
Query: 182 FHKALKEAFEIFCN-------------KAVG-----GSSSSELLATFCDNILKKGG-NEK 222
F A +A++ N K VG S ELLA +CD +L+K ++K
Sbjct: 344 FLTARDKAYKAVVNDATIFKLELPLKQKGVGLKTQPESKCPELLANYCDMLLRKTPLSKK 403
Query: 223 LSDEAIEETLEKVVKLLAYISDKDLFAEFYRKKLARRLLFDRSANDDHERSILTKLKQQ- 281
L+ E IE L++V+ +L Y+ +KD+F +++ L RRL+ D SA+ + E +++ L++
Sbjct: 404 LTSEEIEAKLKEVLLVLKYVQNKDVFMRYHKAHLTRRLILDISADSEIEENMVEWLREVG 463
Query: 282 CGGQFTSKMEGMVTDLTLARENQTSFEEYLSNNQNAHPGIDLSVTVLTTGFWP-SYKSSD 340
+ +K+ M D+ ++ + +F+E NN+ A P +++ +L G W S +
Sbjct: 464 MPADYVNKLARMFQDIKVSEDLNQAFKEMHKNNKLALPADSVNIKILNAGAWSRSSEKVF 523
Query: 341 LNLPSEMVKCVEVFKGFYETKTKHRKLTWIYSLGQCNINGKFEQKNIELIVSTYQAATLL 400
++LP+E+ + + FY+ RKL W + + I K E +L V+T+Q A L
Sbjct: 524 VSLPTELEDLIPEVEEFYKKNHSGRKLHWHHLMSNGIITFKNEVGQYDLEVTTFQLAVLF 583
Query: 401 LFNTSDR--LSYSEIMTQLNLTHDDLVRLLHSL 431
+N R +S+ + L +L R L SL
Sbjct: 584 AWNQRPREKISFENLKLATELPDAELRRTLWSL 616
Score = 134 (52.2 bits), Expect = 4.0e-50, Sum P(2) = 4.0e-50
Identities = 45/137 (32%), Positives = 69/137 (50%)
Query: 435 KYKILLKEPNT---KTISQSDHFEFNSKFT-----DRMRRIKIPL----PPVDERKKIVE 482
K ++LL EP K ++ F N +F+ +R KI L ER + E
Sbjct: 623 KRQVLLYEPQVNSPKDFTEGTLFSVNQEFSLIKNAKVQKRGKINLIGRLQLTTERMREEE 682
Query: 483 D--VDKDRRYAIDAALVRIMKSRKVLGHQQLVSECVEQLSRMFKPDIKAIKKRMEDLITR 540
+ + + R A+++IMK RK + + QL +E VE L MF P K IK+++E LI
Sbjct: 683 NEGIVQLRILRTQEAIIQIMKMRKKISNAQLQTELVEILKNMFLPQKKMIKEQIEWLIEH 742
Query: 541 DYLERDKENPNMFRYLA 557
Y+ RD+ + N F Y+A
Sbjct: 743 KYIRRDESDINTFIYMA 759
>UNIPROTKB|Q93034 [details] [associations]
symbol:CUL5 "Cullin-5" species:9606 "Homo sapiens"
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0019048 "virus-host interaction" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0006970 "response to osmotic stress"
evidence=IEA] [GO:0051480 "cytosolic calcium ion homeostasis"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0031625 "ubiquitin
protein ligase binding" evidence=IDA] [GO:0031466 "Cul5-RING
ubiquitin ligase complex" evidence=IDA] [GO:0000082 "G1/S
transition of mitotic cell cycle" evidence=TAS] [GO:0004872
"receptor activity" evidence=TAS] [GO:0005262 "calcium channel
activity" evidence=TAS] [GO:0007050 "cell cycle arrest"
evidence=TAS] [GO:0008283 "cell proliferation" evidence=TAS]
[GO:0008285 "negative regulation of cell proliferation"
evidence=TAS] [GO:0097193 "intrinsic apoptotic signaling pathway"
evidence=TAS] [GO:0005829 "cytosol" evidence=TAS] [GO:0016032
"viral reproduction" evidence=TAS] [GO:0070588 "calcium ion
transmembrane transport" evidence=TAS] InterPro:IPR001373
InterPro:IPR016157 InterPro:IPR016158 InterPro:IPR019559
Pfam:PF00888 Pfam:PF10557 PROSITE:PS01256 PROSITE:PS50069
SMART:SM00182 SMART:SM00884 UniPathway:UPA00143 GO:GO:0005829
GO:GO:0005634 Reactome:REACT_111102 Reactome:REACT_116125
Reactome:REACT_6900 GO:GO:0019048 GO:GO:0008285 GO:GO:0016032
EMBL:CH471065 GO:GO:0000082 GO:GO:0008283 GO:GO:0005262
GO:GO:0004872 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0007050
GO:GO:0016567 GO:GO:0006970 GO:GO:0006511 GO:GO:0051480
GO:GO:0097193 eggNOG:COG5647 SUPFAM:SSF75632 GO:GO:0031466
GO:GO:0031625 InterPro:IPR016159 SUPFAM:SSF74788
HOGENOM:HOG000007610 KO:K10612 OMA:EVTTFQM EMBL:X81882
EMBL:AF017061 EMBL:AF327710 EMBL:AK292575 EMBL:BC063306
IPI:IPI00216003 RefSeq:NP_003469.2 UniGene:Hs.440320
UniGene:Hs.701122 PDB:3DPL PDB:3DQV PDBsum:3DPL PDBsum:3DQV
ProteinModelPortal:Q93034 SMR:Q93034 DIP:DIP-43696N IntAct:Q93034
MINT:MINT-1184052 STRING:Q93034 PhosphoSite:Q93034 DMDM:14917099
PaxDb:Q93034 PRIDE:Q93034 Ensembl:ENST00000393094
Ensembl:ENST00000531427 GeneID:8065 KEGG:hsa:8065 UCSC:uc001pjv.3
CTD:8065 GeneCards:GC11P107913 HGNC:HGNC:2556 HPA:CAB017787
HPA:HPA002185 MIM:601741 neXtProt:NX_Q93034 PharmGKB:PA27052
HOVERGEN:HBG099672 InParanoid:Q93034 OrthoDB:EOG46Q6RZ
PhylomeDB:Q93034 EvolutionaryTrace:Q93034 GenomeRNAi:8065
NextBio:30655 ArrayExpress:Q93034 Bgee:Q93034 CleanEx:HS_CUL5
Genevestigator:Q93034 GermOnline:ENSG00000166266 Uniprot:Q93034
Length = 780
Score = 419 (152.6 bits), Expect = 4.9e-50, Sum P(2) = 4.9e-50
Identities = 118/453 (26%), Positives = 219/453 (48%)
Query: 3 QMDSYEKDFEEHMLQDTGAYYSRKASNWILEDSCPEYMIKAEECLKKERDRVSHYLHSSS 62
++ Y +FE+ L T +Y +A +++ ++ YM A+ LK+E R YL +
Sbjct: 194 KLQIYRDNFEKAYLDSTERFYRTQAPSYLQQNGVQNYMKYADAKLKEEEKRALRYLETRR 253
Query: 63 EPKLVEKVQHELLVVYATELLEKEQSGCRALLREDKVEDLSRMYRLYHKIPKGLEPVANV 122
E VE + + T E + C+ +++ ++ E L M+ L K+P G+EP+
Sbjct: 254 ECNSVEALMECCVNALVTSFKETILAECQGMIKRNETEKLHLMFSLMDKVPNGIEPMLKD 313
Query: 123 FKQHITAEGTV-LVQQAEDAATNQGGSSGAVQEQVLIRKIIELHDKYMEYVTNCFINHTL 181
++HI + G +V AE T+ + + +++ L +++ + V F +
Sbjct: 314 LEEHIISAGLADMVAAAETITTDS---------EKYVEQLLTLFNRFSKLVKEAFQDDPR 364
Query: 182 FHKALKEAFEIFCN-------------KAVG-----GSSSSELLATFCDNILKKGG-NEK 222
F A +A++ N K VG S ELLA +CD +L+K ++K
Sbjct: 365 FLTARDKAYKAVVNDATIFKLELPLKQKGVGLKTQPESKCPELLANYCDMLLRKTPLSKK 424
Query: 223 LSDEAIEETLEKVVKLLAYISDKDLFAEFYRKKLARRLLFDRSANDDHERSILTKLKQQ- 281
L+ E IE L++V+ +L Y+ +KD+F +++ L RRL+ D SA+ + E +++ L++
Sbjct: 425 LTSEEIEAKLKEVLLVLKYVQNKDVFMRYHKAHLTRRLILDISADSEIEENMVEWLREVG 484
Query: 282 CGGQFTSKMEGMVTDLTLARENQTSFEEYLSNNQNAHPGIDLSVTVLTTGFWP-SYKSSD 340
+ +K+ M D+ ++ + +F+E NN+ A P +++ +L G W S +
Sbjct: 485 MPADYVNKLARMFQDIKVSEDLNQAFKEMHKNNKLALPADSVNIKILNAGAWSRSSEKVF 544
Query: 341 LNLPSEMVKCVEVFKGFYETKTKHRKLTWIYSLGQCNINGKFEQKNIELIVSTYQAATLL 400
++LP+E+ + + FY+ RKL W + + I K E +L V+T+Q A L
Sbjct: 545 VSLPTELEDLIPEVEEFYKKNHSGRKLHWHHLMSNGIITFKNEVGQYDLEVTTFQLAVLF 604
Query: 401 LFNTSDR--LSYSEIMTQLNLTHDDLVRLLHSL 431
+N R +S+ + L +L R L SL
Sbjct: 605 AWNQRPREKISFENLKLATELPDAELRRTLWSL 637
Score = 134 (52.2 bits), Expect = 4.9e-50, Sum P(2) = 4.9e-50
Identities = 45/137 (32%), Positives = 69/137 (50%)
Query: 435 KYKILLKEPNT---KTISQSDHFEFNSKFT-----DRMRRIKIPL----PPVDERKKIVE 482
K ++LL EP K ++ F N +F+ +R KI L ER + E
Sbjct: 644 KRQVLLYEPQVNSPKDFTEGTLFSVNQEFSLIKNAKVQKRGKINLIGRLQLTTERMREEE 703
Query: 483 D--VDKDRRYAIDAALVRIMKSRKVLGHQQLVSECVEQLSRMFKPDIKAIKKRMEDLITR 540
+ + + R A+++IMK RK + + QL +E VE L MF P K IK+++E LI
Sbjct: 704 NEGIVQLRILRTQEAIIQIMKMRKKISNAQLQTELVEILKNMFLPQKKMIKEQIEWLIEH 763
Query: 541 DYLERDKENPNMFRYLA 557
Y+ RD+ + N F Y+A
Sbjct: 764 KYIRRDESDINTFIYMA 780
>UNIPROTKB|I3LFR2 [details] [associations]
symbol:CUL5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0031466 "Cul5-RING ubiquitin ligase complex"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006511 SUPFAM:SSF75632
GO:GO:0031466 InterPro:IPR016159 SUPFAM:SSF74788
GeneTree:ENSGT00550000074299 KO:K10612 OMA:EVTTFQM CTD:8065
EMBL:FP340346 RefSeq:XP_003357323.1 ProteinModelPortal:I3LFR2
SMR:I3LFR2 PRIDE:I3LFR2 Ensembl:ENSSSCT00000029949 GeneID:100525708
KEGG:ssc:100525708 Uniprot:I3LFR2
Length = 780
Score = 419 (152.6 bits), Expect = 4.9e-50, Sum P(2) = 4.9e-50
Identities = 118/453 (26%), Positives = 219/453 (48%)
Query: 3 QMDSYEKDFEEHMLQDTGAYYSRKASNWILEDSCPEYMIKAEECLKKERDRVSHYLHSSS 62
++ Y +FE+ L T +Y +A +++ ++ YM A+ LK+E R YL +
Sbjct: 194 KLQIYRDNFEKAYLDSTERFYRTQAPSYLQQNGVQNYMKYADAKLKEEEKRALRYLETRR 253
Query: 63 EPKLVEKVQHELLVVYATELLEKEQSGCRALLREDKVEDLSRMYRLYHKIPKGLEPVANV 122
E VE + + T E + C+ +++ ++ E L M+ L K+P G+EP+
Sbjct: 254 ECNSVEALMECCVNALVTSFKETILAECQGMIKRNETEKLHLMFSLMDKVPNGIEPMLKD 313
Query: 123 FKQHITAEGTV-LVQQAEDAATNQGGSSGAVQEQVLIRKIIELHDKYMEYVTNCFINHTL 181
++HI + G +V AE T+ + + +++ L +++ + V F +
Sbjct: 314 LEEHIISAGLADMVAAAETITTDS---------EKYVEQLLTLFNRFSKLVKEAFQDDPR 364
Query: 182 FHKALKEAFEIFCN-------------KAVG-----GSSSSELLATFCDNILKKGG-NEK 222
F A +A++ N K VG S ELLA +CD +L+K ++K
Sbjct: 365 FLTARDKAYKAVVNDATIFKLELPLKQKGVGLKTQPESKCPELLANYCDMLLRKTPLSKK 424
Query: 223 LSDEAIEETLEKVVKLLAYISDKDLFAEFYRKKLARRLLFDRSANDDHERSILTKLKQQ- 281
L+ E IE L++V+ +L Y+ +KD+F +++ L RRL+ D SA+ + E +++ L++
Sbjct: 425 LTSEEIEAKLKEVLLVLKYVQNKDVFMRYHKAHLTRRLILDISADSEIEENMVEWLREVG 484
Query: 282 CGGQFTSKMEGMVTDLTLARENQTSFEEYLSNNQNAHPGIDLSVTVLTTGFWP-SYKSSD 340
+ +K+ M D+ ++ + +F+E NN+ A P +++ +L G W S +
Sbjct: 485 MPADYVNKLARMFQDIKVSEDLNQAFKEMHKNNKLALPADSVNIKILNAGAWSRSSEKVF 544
Query: 341 LNLPSEMVKCVEVFKGFYETKTKHRKLTWIYSLGQCNINGKFEQKNIELIVSTYQAATLL 400
++LP+E+ + + FY+ RKL W + + I K E +L V+T+Q A L
Sbjct: 545 VSLPTELEDLIPEVEEFYKKNHSGRKLHWHHLMSNGIITFKNEVGQYDLEVTTFQLAVLF 604
Query: 401 LFNTSDR--LSYSEIMTQLNLTHDDLVRLLHSL 431
+N R +S+ + L +L R L SL
Sbjct: 605 AWNQRPREKISFENLKLATELPDAELRRTLWSL 637
Score = 134 (52.2 bits), Expect = 4.9e-50, Sum P(2) = 4.9e-50
Identities = 45/137 (32%), Positives = 69/137 (50%)
Query: 435 KYKILLKEPNT---KTISQSDHFEFNSKFT-----DRMRRIKIPL----PPVDERKKIVE 482
K ++LL EP K ++ F N +F+ +R KI L ER + E
Sbjct: 644 KRQVLLYEPQVNSPKDFTEGTLFSVNQEFSLIKNAKVQKRGKINLIGRLQLTTERMREEE 703
Query: 483 D--VDKDRRYAIDAALVRIMKSRKVLGHQQLVSECVEQLSRMFKPDIKAIKKRMEDLITR 540
+ + + R A+++IMK RK + + QL +E VE L MF P K IK+++E LI
Sbjct: 704 NEGIVQLRILRTQEAIIQIMKMRKKISNAQLQTELVEILKNMFLPQKKMIKEQIEWLIEH 763
Query: 541 DYLERDKENPNMFRYLA 557
Y+ RD+ + N F Y+A
Sbjct: 764 KYIRRDESDINTFIYMA 780
>UNIPROTKB|F1P0F9 [details] [associations]
symbol:CUL5 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0031466 "Cul5-RING ubiquitin ligase complex"
evidence=IEA] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006511 SUPFAM:SSF75632
GO:GO:0031466 InterPro:IPR016159 SUPFAM:SSF74788
GeneTree:ENSGT00550000074299 EMBL:AADN02005055 IPI:IPI00593656
Ensembl:ENSGALT00000027725 Uniprot:F1P0F9
Length = 776
Score = 420 (152.9 bits), Expect = 5.9e-50, Sum P(2) = 5.9e-50
Identities = 118/453 (26%), Positives = 219/453 (48%)
Query: 3 QMDSYEKDFEEHMLQDTGAYYSRKASNWILEDSCPEYMIKAEECLKKERDRVSHYLHSSS 62
++ Y +FE+ L T +Y +A +++ ++ YM A+ LK+E R YL +
Sbjct: 190 KLQIYRDNFEKAYLDSTERFYRTQAPSYLQQNGVQNYMKYADAKLKEEEKRALRYLETRR 249
Query: 63 EPKLVEKVQHELLVVYATELLEKEQSGCRALLREDKVEDLSRMYRLYHKIPKGLEPVANV 122
E VE + + T E + C+ +++ ++ E L M+ L K+P G+EP+
Sbjct: 250 ECNSVEALMECCVNALVTSFKETILAECQGMIKRNETEKLHLMFSLMDKVPNGIEPMLKD 309
Query: 123 FKQHITAEGTV-LVQQAEDAATNQGGSSGAVQEQVLIRKIIELHDKYMEYVTNCFINHTL 181
++HI + G +V AE T+ + + +++ L +++ + V F +
Sbjct: 310 LEEHIVSAGLADMVAAAETITTDS---------EKYVEQLLTLFNRFSKLVKEAFQDDPR 360
Query: 182 FHKALKEAFEIFCN-------------KAVG-----GSSSSELLATFCDNILKKGG-NEK 222
F A +A++ N K VG S ELLA +CD +L+K ++K
Sbjct: 361 FLTARDKAYKAVVNDATIFKLELPLKQKGVGLKTQPESKCPELLANYCDMLLRKTPLSKK 420
Query: 223 LSDEAIEETLEKVVKLLAYISDKDLFAEFYRKKLARRLLFDRSANDDHERSILTKLKQQ- 281
L+ E IE L++V+ +L Y+ +KD+F +++ L RRL+ D SA+ + E +++ L++
Sbjct: 421 LTSEEIEAKLKEVLLVLKYVQNKDVFMRYHKAHLTRRLILDISADSEIEENMVEWLREVG 480
Query: 282 CGGQFTSKMEGMVTDLTLARENQTSFEEYLSNNQNAHPGIDLSVTVLTTGFWP-SYKSSD 340
+ +K+ M D+ ++ + +F+E NN+ A P +++ +L G W S +
Sbjct: 481 MPADYVNKLARMFQDIKVSEDLNQAFKEMHKNNKLALPADSVNIKILNAGAWSRSSEKVF 540
Query: 341 LNLPSEMVKCVEVFKGFYETKTKHRKLTWIYSLGQCNINGKFEQKNIELIVSTYQAATLL 400
++LP+E+ + + FY+ RKL W + + I K E +L V+T+Q A L
Sbjct: 541 VSLPTELEDLIPEVEEFYKKNHSGRKLHWHHLMSNGIITFKNEVGQYDLEVTTFQLAVLF 600
Query: 401 LFNTSDR--LSYSEIMTQLNLTHDDLVRLLHSL 431
+N R +S+ + L +L R L SL
Sbjct: 601 AWNQRPREKISFENLKLATELPDAELRRTLWSL 633
Score = 132 (51.5 bits), Expect = 5.9e-50, Sum P(2) = 5.9e-50
Identities = 45/137 (32%), Positives = 69/137 (50%)
Query: 435 KYKILLKEPNT---KTISQSDHFEFNSKFT-----DRMRRIKIPL----PPVDERKKIVE 482
K ++LL EP K ++ F N +F+ +R KI L ER + E
Sbjct: 640 KRQVLLYEPQVNSPKDFTEGTLFSVNQEFSLIKNAKVQKRGKINLIGRLQLTTERMREEE 699
Query: 483 D--VDKDRRYAIDAALVRIMKSRKVLGHQQLVSECVEQLSRMFKPDIKAIKKRMEDLITR 540
+ + + R A+++IMK RK + + QL +E VE L MF P K IK+++E LI
Sbjct: 700 NEGIVQLRILRTQEAIIQIMKMRKKITNAQLQTELVEILKNMFLPQKKMIKEQIEWLIEH 759
Query: 541 DYLERDKENPNMFRYLA 557
Y+ RD+ + N F Y+A
Sbjct: 760 KYIRRDESDINTFIYMA 776
>MGI|MGI:1922967 [details] [associations]
symbol:Cul5 "cullin 5" species:10090 "Mus musculus"
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0005886
"plasma membrane" evidence=ISO] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=IEA] [GO:0031461 "cullin-RING
ubiquitin ligase complex" evidence=IEA] [GO:0031466 "Cul5-RING
ubiquitin ligase complex" evidence=ISO] [GO:0031625 "ubiquitin
protein ligase binding" evidence=ISO] [GO:0051480 "cytosolic
calcium ion homeostasis" evidence=ISO] InterPro:IPR001373
InterPro:IPR016157 InterPro:IPR016158 InterPro:IPR019559
Pfam:PF00888 Pfam:PF10557 PROSITE:PS01256 PROSITE:PS50069
SMART:SM00182 SMART:SM00884 UniPathway:UPA00143 MGI:MGI:1922967
GO:GO:0005634 GO:GO:0005737 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0016567 GO:GO:0006970 GO:GO:0006511 GO:GO:0051480
eggNOG:COG5647 SUPFAM:SSF75632 GO:GO:0031466 InterPro:IPR016159
SUPFAM:SSF74788 HOGENOM:HOG000007610 KO:K10612 CTD:8065
HOVERGEN:HBG099672 OrthoDB:EOG46Q6RZ EMBL:AK014894 EMBL:AK030306
EMBL:AK031955 EMBL:AK046030 EMBL:AK080305 EMBL:BC075710
IPI:IPI00988369 RefSeq:NP_001155090.1 RefSeq:NP_082083.2
UniGene:Mm.218910 UniGene:Mm.482399 PDB:2WZK PDBsum:2WZK
ProteinModelPortal:Q9D5V5 SMR:Q9D5V5 IntAct:Q9D5V5 STRING:Q9D5V5
PhosphoSite:Q9D5V5 PaxDb:Q9D5V5 PRIDE:Q9D5V5 GeneID:75717
KEGG:mmu:75717 InParanoid:Q9D5V5 EvolutionaryTrace:Q9D5V5
NextBio:343766 Bgee:Q9D5V5 CleanEx:MM_CUL5 Genevestigator:Q9D5V5
GermOnline:ENSMUSG00000032030 Uniprot:Q9D5V5
Length = 780
Score = 419 (152.6 bits), Expect = 6.3e-50, Sum P(2) = 6.3e-50
Identities = 118/453 (26%), Positives = 219/453 (48%)
Query: 3 QMDSYEKDFEEHMLQDTGAYYSRKASNWILEDSCPEYMIKAEECLKKERDRVSHYLHSSS 62
++ Y +FE+ L T +Y +A +++ ++ YM A+ LK+E R YL +
Sbjct: 194 KLQIYRDNFEKAYLDSTERFYRTQAPSYLQQNGVQNYMKYADAKLKEEEKRALRYLETRR 253
Query: 63 EPKLVEKVQHELLVVYATELLEKEQSGCRALLREDKVEDLSRMYRLYHKIPKGLEPVANV 122
E VE + + T E + C+ +++ ++ E L M+ L K+P G+EP+
Sbjct: 254 ECNSVEALMECCVNALVTSFKETILAECQGMIKRNETEKLHLMFSLMDKVPNGIEPMLKD 313
Query: 123 FKQHITAEGTV-LVQQAEDAATNQGGSSGAVQEQVLIRKIIELHDKYMEYVTNCFINHTL 181
++HI + G +V AE T+ + + +++ L +++ + V F +
Sbjct: 314 LEEHIISAGLADMVAAAETITTDS---------EKYVEQLLTLFNRFSKLVKEAFQDDPR 364
Query: 182 FHKALKEAFEIFCN-------------KAVG-----GSSSSELLATFCDNILKKGG-NEK 222
F A +A++ N K VG S ELLA +CD +L+K ++K
Sbjct: 365 FLTARDKAYKAVVNDATIFKLELPLKQKGVGLKTQPESKCPELLANYCDMLLRKTPLSKK 424
Query: 223 LSDEAIEETLEKVVKLLAYISDKDLFAEFYRKKLARRLLFDRSANDDHERSILTKLKQQ- 281
L+ E IE L++V+ +L Y+ +KD+F +++ L RRL+ D SA+ + E +++ L++
Sbjct: 425 LTSEEIEAKLKEVLLVLKYVQNKDVFMRYHKAHLTRRLILDISADSEIEENMVEWLREVG 484
Query: 282 CGGQFTSKMEGMVTDLTLARENQTSFEEYLSNNQNAHPGIDLSVTVLTTGFWP-SYKSSD 340
+ +K+ M D+ ++ + +F+E NN+ A P +++ +L G W S +
Sbjct: 485 MPADYVNKLARMFQDIKVSEDLNQAFKEMHKNNKLALPADSVNIKILNAGAWSRSSEKVF 544
Query: 341 LNLPSEMVKCVEVFKGFYETKTKHRKLTWIYSLGQCNINGKFEQKNIELIVSTYQAATLL 400
++LP+E+ + + FY+ RKL W + + I K E +L V+T+Q A L
Sbjct: 545 VSLPTELEDLIPEVEEFYKKNHSGRKLHWHHLMSNGIITFKNEVGQYDLEVTTFQLAVLF 604
Query: 401 LFNTSDR--LSYSEIMTQLNLTHDDLVRLLHSL 431
+N R +S+ + L +L R L SL
Sbjct: 605 AWNQRPREKISFENLKLATELPDAELRRTLWSL 637
Score = 133 (51.9 bits), Expect = 6.3e-50, Sum P(2) = 6.3e-50
Identities = 29/63 (46%), Positives = 41/63 (65%)
Query: 495 ALVRIMKSRKVLGHQQLVSECVEQLSRMFKPDIKAIKKRMEDLITRDYLERDKENPNMFR 554
A+++IMK RK + + QL +E VE L MF P K IK++ME LI Y+ RD+ + N F
Sbjct: 718 AIIQIMKMRKKISNAQLQTELVEILKNMFLPQKKMIKEQMEWLIEHRYIRRDEADINTFI 777
Query: 555 YLA 557
Y+A
Sbjct: 778 YMA 780
>RGD|621742 [details] [associations]
symbol:Cul5 "cullin 5" species:10116 "Rattus norvegicus"
[GO:0000209 "protein polyubiquitination" evidence=TAS] [GO:0004842
"ubiquitin-protein ligase activity" evidence=TAS] [GO:0005000
"vasopressin receptor activity" evidence=TAS] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005886
"plasma membrane" evidence=IDA] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=IEA] [GO:0006970 "response to
osmotic stress" evidence=IEP] [GO:0031461 "cullin-RING ubiquitin
ligase complex" evidence=IEA] [GO:0031466 "Cul5-RING ubiquitin
ligase complex" evidence=ISO;TAS] [GO:0031625 "ubiquitin protein
ligase binding" evidence=IEA;ISO] [GO:0051480 "cytosolic calcium
ion homeostasis" evidence=IMP] InterPro:IPR001373
InterPro:IPR016157 InterPro:IPR016158 InterPro:IPR019559
Pfam:PF00888 Pfam:PF10557 PROSITE:PS01256 PROSITE:PS50069
SMART:SM00182 SMART:SM00884 UniPathway:UPA00143 RGD:621742
GO:GO:0005886 GO:GO:0005634 GO:GO:0005737 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0006970 GO:GO:0006511 GO:GO:0051480
GO:GO:0004842 GO:GO:0000209 eggNOG:COG5647 SUPFAM:SSF75632
GO:GO:0005000 GO:GO:0031466 InterPro:IPR016159 SUPFAM:SSF74788
GeneTree:ENSGT00550000074299 HOGENOM:HOG000007610 KO:K10612
OMA:EVTTFQM CTD:8065 HOVERGEN:HBG099672 OrthoDB:EOG46Q6RZ
EMBL:AF135115 IPI:IPI00325517 RefSeq:NP_073174.1 UniGene:Rn.163001
ProteinModelPortal:Q9JJ31 STRING:Q9JJ31 PhosphoSite:Q9JJ31
PRIDE:Q9JJ31 Ensembl:ENSRNOT00000010956 GeneID:64624 KEGG:rno:64624
UCSC:RGD:621742 InParanoid:Q9JJ31 NextBio:613566
ArrayExpress:Q9JJ31 Genevestigator:Q9JJ31
GermOnline:ENSRNOG00000008039 Uniprot:Q9JJ31
Length = 780
Score = 417 (151.9 bits), Expect = 2.2e-49, Sum P(2) = 2.2e-49
Identities = 118/453 (26%), Positives = 219/453 (48%)
Query: 3 QMDSYEKDFEEHMLQDTGAYYSRKASNWILEDSCPEYMIKAEECLKKERDRVSHYLHSSS 62
++ Y +FE+ L T +Y +A +++ ++ YM A+ LK+E R YL +
Sbjct: 194 KLQIYRDNFEKAYLDSTERFYRTQAPSYLQQNGVQNYMKYADAKLKEEEKRALRYLETRR 253
Query: 63 EPKLVEKVQHELLVVYATELLEKEQSGCRALLREDKVEDLSRMYRLYHKIPKGLEPVANV 122
E VE + + T E + C+ +++ ++ E L M+ L K+P G+EP+
Sbjct: 254 ECNSVEALMECCVNALVTSFKETILAECQGMIKRNETEKLHLMFSLMDKVPGGIEPMLKD 313
Query: 123 FKQHITAEGTV-LVQQAEDAATNQGGSSGAVQEQVLIRKIIELHDKYMEYVTNCFINHTL 181
++HI + G +V AE T+ + + +++ L +++ + V F +
Sbjct: 314 LEEHIISAGLADMVAAAETITTDS---------EKYVEQLLTLFNRFSKLVKEAFQDDPR 364
Query: 182 FHKALKEAFEIFCN-------------KAVG-----GSSSSELLATFCDNILKKGG-NEK 222
F A +A++ N K VG S ELLA +CD +L+K ++K
Sbjct: 365 FLTARDKAYKAVVNDATIFKLELPLKQKGVGLKTQPESKCPELLANYCDMLLRKTPLSKK 424
Query: 223 LSDEAIEETLEKVVKLLAYISDKDLFAEFYRKKLARRLLFDRSANDDHERSILTKLKQQ- 281
L+ E IE L++V+ +L Y+ +KD+F +++ L RRL+ D SA+ + E +++ L++
Sbjct: 425 LTSEEIEAKLKEVLLVLKYVQNKDVFMRYHKAHLTRRLILDISADSEIEENMVEWLREVG 484
Query: 282 CGGQFTSKMEGMVTDLTLARENQTSFEEYLSNNQNAHPGIDLSVTVLTTGFWP-SYKSSD 340
+ +K+ M D+ ++ + +F+E NN+ A P +++ +L G W S +
Sbjct: 485 MPADYVNKLARMFQDIKVSEDLNQAFKEMHKNNKLALPADSVNIKILNAGAWSRSSEKVF 544
Query: 341 LNLPSEMVKCVEVFKGFYETKTKHRKLTWIYSLGQCNINGKFEQKNIELIVSTYQAATLL 400
++LP+E+ + + FY+ RKL W + + I K E +L V+T+Q A L
Sbjct: 545 VSLPTELEDLIPEVEEFYKKNHSGRKLHWHHLMSNGIITFKNEVGQYDLEVTTFQLAVLF 604
Query: 401 LFNTSDR--LSYSEIMTQLNLTHDDLVRLLHSL 431
+N R +S+ + L +L R L SL
Sbjct: 605 AWNQRPREKISFENLKLATELPDAELRRTLWSL 637
Score = 130 (50.8 bits), Expect = 2.2e-49, Sum P(2) = 2.2e-49
Identities = 28/63 (44%), Positives = 41/63 (65%)
Query: 495 ALVRIMKSRKVLGHQQLVSECVEQLSRMFKPDIKAIKKRMEDLITRDYLERDKENPNMFR 554
A+++IMK RK + + QL +E VE L MF P K IK+++E LI Y+ RD+ + N F
Sbjct: 718 AIIQIMKMRKKISNAQLQTELVEILKNMFLPQKKMIKEQIEWLIEHKYIRRDEADINTFI 777
Query: 555 YLA 557
Y+A
Sbjct: 778 YMA 780
>UNIPROTKB|Q9JJ31 [details] [associations]
symbol:Cul5 "Cullin-5" species:10116 "Rattus norvegicus"
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
UniPathway:UPA00143 RGD:621742 GO:GO:0005886 GO:GO:0005634
GO:GO:0005737 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006970
GO:GO:0006511 GO:GO:0051480 GO:GO:0004842 GO:GO:0000209
eggNOG:COG5647 SUPFAM:SSF75632 GO:GO:0005000 GO:GO:0031466
InterPro:IPR016159 SUPFAM:SSF74788 GeneTree:ENSGT00550000074299
HOGENOM:HOG000007610 KO:K10612 OMA:EVTTFQM CTD:8065
HOVERGEN:HBG099672 OrthoDB:EOG46Q6RZ EMBL:AF135115 IPI:IPI00325517
RefSeq:NP_073174.1 UniGene:Rn.163001 ProteinModelPortal:Q9JJ31
STRING:Q9JJ31 PhosphoSite:Q9JJ31 PRIDE:Q9JJ31
Ensembl:ENSRNOT00000010956 GeneID:64624 KEGG:rno:64624
UCSC:RGD:621742 InParanoid:Q9JJ31 NextBio:613566
ArrayExpress:Q9JJ31 Genevestigator:Q9JJ31
GermOnline:ENSRNOG00000008039 Uniprot:Q9JJ31
Length = 780
Score = 417 (151.9 bits), Expect = 2.2e-49, Sum P(2) = 2.2e-49
Identities = 118/453 (26%), Positives = 219/453 (48%)
Query: 3 QMDSYEKDFEEHMLQDTGAYYSRKASNWILEDSCPEYMIKAEECLKKERDRVSHYLHSSS 62
++ Y +FE+ L T +Y +A +++ ++ YM A+ LK+E R YL +
Sbjct: 194 KLQIYRDNFEKAYLDSTERFYRTQAPSYLQQNGVQNYMKYADAKLKEEEKRALRYLETRR 253
Query: 63 EPKLVEKVQHELLVVYATELLEKEQSGCRALLREDKVEDLSRMYRLYHKIPKGLEPVANV 122
E VE + + T E + C+ +++ ++ E L M+ L K+P G+EP+
Sbjct: 254 ECNSVEALMECCVNALVTSFKETILAECQGMIKRNETEKLHLMFSLMDKVPGGIEPMLKD 313
Query: 123 FKQHITAEGTV-LVQQAEDAATNQGGSSGAVQEQVLIRKIIELHDKYMEYVTNCFINHTL 181
++HI + G +V AE T+ + + +++ L +++ + V F +
Sbjct: 314 LEEHIISAGLADMVAAAETITTDS---------EKYVEQLLTLFNRFSKLVKEAFQDDPR 364
Query: 182 FHKALKEAFEIFCN-------------KAVG-----GSSSSELLATFCDNILKKGG-NEK 222
F A +A++ N K VG S ELLA +CD +L+K ++K
Sbjct: 365 FLTARDKAYKAVVNDATIFKLELPLKQKGVGLKTQPESKCPELLANYCDMLLRKTPLSKK 424
Query: 223 LSDEAIEETLEKVVKLLAYISDKDLFAEFYRKKLARRLLFDRSANDDHERSILTKLKQQ- 281
L+ E IE L++V+ +L Y+ +KD+F +++ L RRL+ D SA+ + E +++ L++
Sbjct: 425 LTSEEIEAKLKEVLLVLKYVQNKDVFMRYHKAHLTRRLILDISADSEIEENMVEWLREVG 484
Query: 282 CGGQFTSKMEGMVTDLTLARENQTSFEEYLSNNQNAHPGIDLSVTVLTTGFWP-SYKSSD 340
+ +K+ M D+ ++ + +F+E NN+ A P +++ +L G W S +
Sbjct: 485 MPADYVNKLARMFQDIKVSEDLNQAFKEMHKNNKLALPADSVNIKILNAGAWSRSSEKVF 544
Query: 341 LNLPSEMVKCVEVFKGFYETKTKHRKLTWIYSLGQCNINGKFEQKNIELIVSTYQAATLL 400
++LP+E+ + + FY+ RKL W + + I K E +L V+T+Q A L
Sbjct: 545 VSLPTELEDLIPEVEEFYKKNHSGRKLHWHHLMSNGIITFKNEVGQYDLEVTTFQLAVLF 604
Query: 401 LFNTSDR--LSYSEIMTQLNLTHDDLVRLLHSL 431
+N R +S+ + L +L R L SL
Sbjct: 605 AWNQRPREKISFENLKLATELPDAELRRTLWSL 637
Score = 130 (50.8 bits), Expect = 2.2e-49, Sum P(2) = 2.2e-49
Identities = 28/63 (44%), Positives = 41/63 (65%)
Query: 495 ALVRIMKSRKVLGHQQLVSECVEQLSRMFKPDIKAIKKRMEDLITRDYLERDKENPNMFR 554
A+++IMK RK + + QL +E VE L MF P K IK+++E LI Y+ RD+ + N F
Sbjct: 718 AIIQIMKMRKKISNAQLQTELVEILKNMFLPQKKMIKEQIEWLIEHKYIRRDEADINTFI 777
Query: 555 YLA 557
Y+A
Sbjct: 778 YMA 780
>CGD|CAL0000107 [details] [associations]
symbol:CDC53 species:5476 "Candida albicans" [GO:0019005 "SCF
ubiquitin ligase complex" evidence=IEA;ISA] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=ISA;IMP] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=ISA;IMP] [GO:0006521 "regulation of cellular
amino acid metabolic process" evidence=IMP] [GO:0010570 "regulation
of filamentous growth" evidence=IMP] [GO:0005829 "cytosol"
evidence=IEA] [GO:0032876 "negative regulation of DNA
endoreduplication" evidence=IEA] [GO:0000082 "G1/S transition of
mitotic cell cycle" evidence=IEA] [GO:0000086 "G2/M transition of
mitotic cell cycle" evidence=IEA] [GO:0042787 "protein
ubiquitination involved in ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0070783 "growth of unicellular organism
as a thread of attached cells" evidence=IMP] [GO:0030447
"filamentous growth" evidence=IMP] [GO:0003688 "DNA replication
origin binding" evidence=IEA] [GO:0030674 "protein binding,
bridging" evidence=IEA] InterPro:IPR001373 InterPro:IPR016158
InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557 PROSITE:PS50069
SMART:SM00182 SMART:SM00884 CGD:CAL0000107 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0016567 GO:GO:0019005 EMBL:AACQ01000014
EMBL:AACQ01000013 eggNOG:COG5647 SUPFAM:SSF75632 GO:GO:0010570
GO:GO:0006521 InterPro:IPR016159 SUPFAM:SSF74788 GO:GO:0031146
GO:GO:0070783 KO:K03347 RefSeq:XP_721632.1 RefSeq:XP_721751.1
ProteinModelPortal:Q5AJB7 STRING:Q5AJB7 GeneID:3636603
GeneID:3636750 KEGG:cal:CaO19.1674 KEGG:cal:CaO19.9243
Uniprot:Q5AJB7
Length = 752
Score = 515 (186.3 bits), Expect = 3.1e-49, P = 3.1e-49
Identities = 146/558 (26%), Positives = 279/558 (50%)
Query: 7 YEKDFEEHMLQDTGAYYSRKASNWILEDSCPEYMIKAEECLKKERDRVSHYLHSSSEPKL 66
Y FE L+ T YY+++++ ++ + +YM K E + +E R ++YL ++ L
Sbjct: 213 YVNSFEIPFLEATMEYYAKESAAFLASHNVIDYMKKCETRIGEEVSRSNNYLEERTKKPL 272
Query: 67 VEKVQHELLVVYATELLEKEQSGCRALLREDKVEDLSRMYRLYHKIPKGLEPVANVFKQH 126
+E + L+ +A E+ ++ LL +++++ + RMY+L ++ K L+P+AN + +
Sbjct: 273 LEVLNAALIEKHANEMYDQ----FLVLLEQNQIDHIQRMYKLLARVQKTLDPLANTLELY 328
Query: 127 ITAEGTVLVQQAEDAATNQGGSSGAVQEQVLIRKIIELHDKYMEYVTNCFINHTLFHKAL 186
I E +++ + A N V+ +V + +I +++++ + V F T F K+L
Sbjct: 329 IKKEAAAALEEIQTQAENSEAKKKIVEPKVYVHTLISIYNRFNDIVVRAFSKDTKFIKSL 388
Query: 187 KEAFEIFCN-------KAVGGSSSSELLATFCDNILKKGGNEKLSDEAIEETLEKVVKLL 239
A F N K + ELLA + D LK N K +E + L V K
Sbjct: 389 DNACRHFVNNNPIATPKPRSPCRTPELLARYADGFLKS--NSK-DNEMNADNLMIVFK-- 443
Query: 240 AYISDKDLFAEFYRKKLARRLLFDRSANDDHERSILTKLKQQCGGQFTSKMEGMVTDLTL 299
+I+++D F E YR+ LA+RL+ S +++ E S++ +L+++ ++TSKM M TD+
Sbjct: 444 -FIAERDSFEEHYRRLLAKRLVNGTSKSEEMEESVIHRLQEENSIEYTSKMTKMFTDIKA 502
Query: 300 ARENQTSFEEYLSNNQNAHPGIDLSVTVLTTGFWPSYKSSDLN---LPSEMVKCVEVFKG 356
+ + + F++ N D S VL WP + S D N L E+ ++ FK
Sbjct: 503 SDDLKIKFKD----GMNVL--FDFSPMVLARSTWPFHSSQDYNDLKLAPELKVTIDSFKA 556
Query: 357 FYETKTKHRKLTWIYSLGQCNINGKFEQ----KNIELIVSTYQAATLLLFNTSDRLSYSE 412
Y + K +++ W+++ G+ + + K IVS Q LL +N S + +
Sbjct: 557 MYLQQGKGKQIEWLWNHGRAELKAHLTKGKGGKPFNFIVSQIQLMVLLAYNYSKTYTLDD 616
Query: 413 IMTQLNLTHDDLVRLLHSLSCAKYKILLKEPNTKTISQSDHFEFNSKFTDRMRRI-KIPL 471
++ + + + L H KYK+L +E + I DH+ SK +++ I I
Sbjct: 617 LVKIVGIKKELLQN--HVTPFVKYKLLKEEGDQLVIV--DHYP--SK-KNKVSFIGAITK 669
Query: 472 PPVDERKKIVEDVDKDRRYAIDAALVRIMKSRKVLGHQQLVSECVEQLSRMFKPDIKAIK 531
++ ++I ++V + R ++A++VRIMKS+K + L++E V Q F +K
Sbjct: 670 TKEEDVEEITKEVQQSRTIFLEASIVRIMKSKKSMAPNNLLNEVVVQAGNRFNAKNIDVK 729
Query: 532 KRMEDLITRDYLERDKEN 549
+ ++ LI ++YL+R+ ++
Sbjct: 730 RAIDSLIDKEYLKRNGDD 747
>UNIPROTKB|Q5AJB7 [details] [associations]
symbol:CDC53 "Putative uncharacterized protein CDC53"
species:237561 "Candida albicans SC5314" [GO:0006521 "regulation of
cellular amino acid metabolic process" evidence=IMP] [GO:0010570
"regulation of filamentous growth" evidence=IMP] [GO:0016567
"protein ubiquitination" evidence=ISA;IMP] [GO:0019005 "SCF
ubiquitin ligase complex" evidence=ISA] [GO:0030447 "filamentous
growth" evidence=IMP] [GO:0031146 "SCF-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=ISA;IMP]
[GO:0070783 "growth of unicellular organism as a thread of attached
cells" evidence=IMP] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=ISA;IMP] InterPro:IPR001373 InterPro:IPR016158
InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557 PROSITE:PS50069
SMART:SM00182 SMART:SM00884 CGD:CAL0000107 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0016567 GO:GO:0019005 EMBL:AACQ01000014
EMBL:AACQ01000013 eggNOG:COG5647 SUPFAM:SSF75632 GO:GO:0010570
GO:GO:0006521 InterPro:IPR016159 SUPFAM:SSF74788 GO:GO:0031146
GO:GO:0070783 KO:K03347 RefSeq:XP_721632.1 RefSeq:XP_721751.1
ProteinModelPortal:Q5AJB7 STRING:Q5AJB7 GeneID:3636603
GeneID:3636750 KEGG:cal:CaO19.1674 KEGG:cal:CaO19.9243
Uniprot:Q5AJB7
Length = 752
Score = 515 (186.3 bits), Expect = 3.1e-49, P = 3.1e-49
Identities = 146/558 (26%), Positives = 279/558 (50%)
Query: 7 YEKDFEEHMLQDTGAYYSRKASNWILEDSCPEYMIKAEECLKKERDRVSHYLHSSSEPKL 66
Y FE L+ T YY+++++ ++ + +YM K E + +E R ++YL ++ L
Sbjct: 213 YVNSFEIPFLEATMEYYAKESAAFLASHNVIDYMKKCETRIGEEVSRSNNYLEERTKKPL 272
Query: 67 VEKVQHELLVVYATELLEKEQSGCRALLREDKVEDLSRMYRLYHKIPKGLEPVANVFKQH 126
+E + L+ +A E+ ++ LL +++++ + RMY+L ++ K L+P+AN + +
Sbjct: 273 LEVLNAALIEKHANEMYDQ----FLVLLEQNQIDHIQRMYKLLARVQKTLDPLANTLELY 328
Query: 127 ITAEGTVLVQQAEDAATNQGGSSGAVQEQVLIRKIIELHDKYMEYVTNCFINHTLFHKAL 186
I E +++ + A N V+ +V + +I +++++ + V F T F K+L
Sbjct: 329 IKKEAAAALEEIQTQAENSEAKKKIVEPKVYVHTLISIYNRFNDIVVRAFSKDTKFIKSL 388
Query: 187 KEAFEIFCN-------KAVGGSSSSELLATFCDNILKKGGNEKLSDEAIEETLEKVVKLL 239
A F N K + ELLA + D LK N K +E + L V K
Sbjct: 389 DNACRHFVNNNPIATPKPRSPCRTPELLARYADGFLKS--NSK-DNEMNADNLMIVFK-- 443
Query: 240 AYISDKDLFAEFYRKKLARRLLFDRSANDDHERSILTKLKQQCGGQFTSKMEGMVTDLTL 299
+I+++D F E YR+ LA+RL+ S +++ E S++ +L+++ ++TSKM M TD+
Sbjct: 444 -FIAERDSFEEHYRRLLAKRLVNGTSKSEEMEESVIHRLQEENSIEYTSKMTKMFTDIKA 502
Query: 300 ARENQTSFEEYLSNNQNAHPGIDLSVTVLTTGFWPSYKSSDLN---LPSEMVKCVEVFKG 356
+ + + F++ N D S VL WP + S D N L E+ ++ FK
Sbjct: 503 SDDLKIKFKD----GMNVL--FDFSPMVLARSTWPFHSSQDYNDLKLAPELKVTIDSFKA 556
Query: 357 FYETKTKHRKLTWIYSLGQCNINGKFEQ----KNIELIVSTYQAATLLLFNTSDRLSYSE 412
Y + K +++ W+++ G+ + + K IVS Q LL +N S + +
Sbjct: 557 MYLQQGKGKQIEWLWNHGRAELKAHLTKGKGGKPFNFIVSQIQLMVLLAYNYSKTYTLDD 616
Query: 413 IMTQLNLTHDDLVRLLHSLSCAKYKILLKEPNTKTISQSDHFEFNSKFTDRMRRI-KIPL 471
++ + + + L H KYK+L +E + I DH+ SK +++ I I
Sbjct: 617 LVKIVGIKKELLQN--HVTPFVKYKLLKEEGDQLVIV--DHYP--SK-KNKVSFIGAITK 669
Query: 472 PPVDERKKIVEDVDKDRRYAIDAALVRIMKSRKVLGHQQLVSECVEQLSRMFKPDIKAIK 531
++ ++I ++V + R ++A++VRIMKS+K + L++E V Q F +K
Sbjct: 670 TKEEDVEEITKEVQQSRTIFLEASIVRIMKSKKSMAPNNLLNEVVVQAGNRFNAKNIDVK 729
Query: 532 KRMEDLITRDYLERDKEN 549
+ ++ LI ++YL+R+ ++
Sbjct: 730 RAIDSLIDKEYLKRNGDD 747
>WB|WBGene00000840 [details] [associations]
symbol:cul-5 species:6239 "Caenorhabditis elegans"
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0031461 "cullin-RING ubiquitin ligase complex"
evidence=IEA] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0006974 "response to DNA damage stimulus"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0051729
"germline cell cycle switching, mitotic to meiotic cell cycle"
evidence=IMP] [GO:0006468 "protein phosphorylation" evidence=IMP]
[GO:0008340 "determination of adult lifespan" evidence=IMP]
InterPro:IPR001373 InterPro:IPR016157 InterPro:IPR016158
InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557 PROSITE:PS01256
PROSITE:PS50069 SMART:SM00182 SMART:SM00884 UniPathway:UPA00143
GO:GO:0008340 GO:GO:0006468 GO:GO:0000003 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0051729 GO:GO:0006974 GO:GO:0016567
GO:GO:0006511 eggNOG:COG5647 SUPFAM:SSF75632 GO:GO:0031461
InterPro:IPR016159 SUPFAM:SSF74788 GeneTree:ENSGT00550000074299
EMBL:Z70783 PIR:T28043 RefSeq:NP_505616.2 ProteinModelPortal:Q23639
SMR:Q23639 DIP:DIP-25847N IntAct:Q23639 MINT:MINT-1126406
STRING:Q23639 PaxDb:Q23639 EnsemblMetazoa:ZK856.1 GeneID:179413
KEGG:cel:CELE_ZK856.1 UCSC:ZK856.1 CTD:43434 WormBase:ZK856.1
HOGENOM:HOG000007610 InParanoid:Q23639 KO:K10612 OMA:EVTTFQM
NextBio:905286 Uniprot:Q23639
Length = 765
Score = 429 (156.1 bits), Expect = 4.2e-49, Sum P(2) = 4.2e-49
Identities = 137/484 (28%), Positives = 233/484 (48%)
Query: 7 YEKDFEEHMLQDTGAYYSRKASNWILEDSCPEYMIKAEECLKKERDRVSHYL--HSSSEP 64
Y + FE ++ T YY + N + E EYM+ A++ L++E+ R YL +S +
Sbjct: 183 YRQSFERQFIEQTTEYYKKICGNLLNELGVLEYMVYADKKLEEEQQRAKRYLEMNSPTSG 242
Query: 65 KLVEKVQHELLVVYATELLEKEQSGCRALLREDKVEDLSRMYRLYHKIPKGLEPVANVFK 124
K +EK L+ + +L + C L+ VE L R+YRL + G++ V
Sbjct: 243 KHMEKAVIALVESFEDTILAE----CSKLIASKDVERLQRLYRLIRRTRSGIDTVLKCID 298
Query: 125 QHITAEGTVLVQQAEDAATNQGGSSGAVQEQVLIRKIIELHDKYMEYVTNCFINHTLFHK 184
HI EG D N S + +++++ + DK+ V F +
Sbjct: 299 THIRTEGL------NDMRNNAENLS--TDPERYVQQLLLMFDKFSSLVREGFCDDARLLT 350
Query: 185 ALKEAFE-------IFCNKAVG--G------SSSSELLATFCDNILKKGG-NEKLSDEAI 228
A +AF IF + + G S +ELLA +CD +L+K ++KL+ E I
Sbjct: 351 ARDKAFRAVVNDSSIFKTEMMNKKGRTLSVESKCAELLANYCDLLLRKTQLSKKLTSEEI 410
Query: 229 EETLEKVVKLLAYISDKDLFAEFYRKKLARRLLFDRSANDDHERSILTKLKQQCG--GQF 286
+E L +V+ +L Y+ +KD+F F+R L+RRL+ + SA+ + E ++TKL++ CG
Sbjct: 411 DEKLNQVLLVLKYVENKDVFMRFHRAHLSRRLILEMSADQEKEEMMVTKLRE-CGMPSDA 469
Query: 287 TSKMEGMVTDLTLARENQTSFEEYLSN-NQNAHPGIDLSVTVLTTGFWPSYKSSDL--NL 343
+K+ M+ D+ L ++ +SF++ L+ N N +++ VL G W S + +L
Sbjct: 470 VNKLSRMLQDIELNKDMNSSFKKALTGTNNNKSIADSINMKVLNGGAWGRGGSERIRFSL 529
Query: 344 PSEMVKCVEVFKGFYETKTKHRKLTWIY--SLGQCNINGKFEQKNIELIVSTYQAATLLL 401
P E+ V + FY+ + RKL W++ S G + G +L +T+Q A L
Sbjct: 530 PRELEDFVPEMEAFYKKQHNGRKLCWMHHWSSGTM-VFGTANGGRFDLECTTFQMAVLFC 588
Query: 402 FN--TSDRLSYSEIMTQLNLTHDDLVRLLHSLSC---AKYKILLKEPNTKTISQSDHFEF 456
FN D++S + L +L R L SL +Y+ILL + + T++ D F
Sbjct: 589 FNDRAHDKISLETLRLATELPDAELNRTLLSLVAYPKMRYQILLCDVPSTTVTARD-FTD 647
Query: 457 NSKF 460
++KF
Sbjct: 648 STKF 651
Score = 114 (45.2 bits), Expect = 4.2e-49, Sum P(2) = 4.2e-49
Identities = 29/92 (31%), Positives = 51/92 (55%)
Query: 466 RIKIPLPPVDERKKIVEDVDKDRRYAIDAALVRIMKSRKVLGHQQLVSECVEQLSRMFKP 525
R+++ L E++ E + R + +V+I+K+RK QL E VE L +F P
Sbjct: 676 RLQLSLEANAEKEH--ESIVALRELRVQEGIVKILKTRKTYTLAQLTMELVEILKPLFIP 733
Query: 526 DIKAIKKRMEDLITRDYLERDKENPNMFRYLA 557
+ K IK++++ LI Y+ER ++ N F Y++
Sbjct: 734 NRKIIKEQIDWLIENKYMERRADDINTFVYIS 765
>ZFIN|ZDB-GENE-030131-5426 [details] [associations]
symbol:cul5a "cullin 5a" species:7955 "Danio
rerio" [GO:0031461 "cullin-RING ubiquitin ligase complex"
evidence=IEA] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
ZFIN:ZDB-GENE-030131-5426 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0006511 SUPFAM:SSF75632 GO:GO:0031461 InterPro:IPR016159
SUPFAM:SSF74788 GeneTree:ENSGT00550000074299 EMBL:BX572630
IPI:IPI00836478 Ensembl:ENSDART00000110111 ArrayExpress:F1REN0
Bgee:F1REN0 Uniprot:F1REN0
Length = 780
Score = 398 (145.2 bits), Expect = 3.6e-45, Sum P(2) = 3.6e-45
Identities = 114/453 (25%), Positives = 217/453 (47%)
Query: 3 QMDSYEKDFEEHMLQDTGAYYSRKASNWILEDSCPEYMIKAEECLKKERDRVSHYLHSSS 62
++ Y +FE+ L T +Y +A +++ ++ YM A+ L++E R YL +
Sbjct: 194 KLQIYRDNFEKSYLDSTERFYRTQAPSYLQQNGVQNYMKYADAKLREEEKRALRYLETRR 253
Query: 63 EPKLVEKVQHELLVVYATELLEKEQSGCRALLREDKVEDLSRMYRLYHKIPKGLEPVANV 122
E V+ + + T E + C +++ ++ + L M+ L K+P G+EP+
Sbjct: 254 ECNSVQALMECCVNALVTSFKETILAECPGMIKRNETDKLHLMFSLMDKVPNGIEPMLKD 313
Query: 123 FKQHITAEGTV-LVQQAEDAATNQGGSSGAVQEQVLIRKIIELHDKYMEYVTNCFINHTL 181
++HI + G +V AE T+ + + +++ L +++ + V F +
Sbjct: 314 LEEHIISAGLADMVAAAETITTDS---------EKYVEQLLTLFNRFSKLVKEAFQDDPR 364
Query: 182 FHKALKEAFEIFCN-------------KAVG-----GSSSSELLATFCDNILKKGG-NEK 222
F A +A++ N K VG S ELLA +CD +L+K ++K
Sbjct: 365 FLTARDKAYKAVVNDATIFKLELPMKQKGVGLKTQPESKCPELLANYCDMLLRKTPLSKK 424
Query: 223 LSDEAIEETLEKVVKLLAYISDKDLFAEFYRKKLARRLLFDRSANDDHERSILTKLKQQ- 281
L+ E IE L++V+ +L Y+ +KD+F +++ L RRL+ D SA+ + E +++ L++
Sbjct: 425 LTSEDIELKLKEVLLVLKYVQNKDVFMRYHKAHLTRRLILDISADSEIEENMVEWLREVG 484
Query: 282 CGGQFTSKMEGMVTDLTLARENQTSFEEYLSNNQNAHPGIDLSVTVLTTGFWP-SYKSSD 340
+ +K+ M D+ ++ + F+E +N+ A P +++ +L G W S +
Sbjct: 485 MPADYVNKLARMFQDIKVSEDLNQVFKEMHKHNKLALPADSVNIKILNAGAWSRSSEKVF 544
Query: 341 LNLPSEMVKCVEVFKGFYETKTKHRKLTWIYSLGQCNINGKFEQKNIELIVSTYQAATLL 400
++LP+E+ + + FY+ RKL W + + I K E +L V+T+Q A L
Sbjct: 545 VSLPTELEDLIPEVEDFYKKNHSGRKLHWHHLMSNGIITFKNEVGQYDLEVTTFQLAVLF 604
Query: 401 LFNTSDR--LSYSEIMTQLNLTHDDLVRLLHSL 431
+N R +S+ + L +L R L SL
Sbjct: 605 AWNQRPREKISFENLKLATELPDAELRRTLWSL 637
Score = 133 (51.9 bits), Expect = 3.6e-45, Sum P(2) = 3.6e-45
Identities = 46/137 (33%), Positives = 70/137 (51%)
Query: 435 KYKILLKEPNT---KTISQSDHFEFNSKFT-----DRMRRIKIPL----PPVDERKKIVE 482
K ++LL EP K + S F N +F+ +R KI L ER + E
Sbjct: 644 KRQVLLYEPQVSSPKDFTDSTLFFVNQEFSLIKNSKAQKRGKINLIGRLQLTTERMREEE 703
Query: 483 D--VDKDRRYAIDAALVRIMKSRKVLGHQQLVSECVEQLSRMFKPDIKAIKKRMEDLITR 540
+ + + R A+++IMK RK + + QL +E VE L MF P K IK+++E LI
Sbjct: 704 NEGIVQLRILRTQEAIIQIMKMRKKITNAQLQTELVEILKNMFLPQKKMIKEQIEWLIEH 763
Query: 541 DYLERDKENPNMFRYLA 557
Y++RD+ + N F Y+A
Sbjct: 764 KYIKRDETDINTFIYMA 780
>FB|FBgn0039632 [details] [associations]
symbol:Cul-5 "Cullin-5" species:7227 "Drosophila
melanogaster" [GO:0031461 "cullin-RING ubiquitin ligase complex"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0031625 "ubiquitin protein ligase
binding" evidence=IEA] [GO:0016360 "sensory organ precursor cell
fate determination" evidence=IMP] [GO:0007528 "neuromuscular
junction development" evidence=IMP] [GO:0007293 "germarium-derived
egg chamber formation" evidence=IMP] [GO:0008285 "negative
regulation of cell proliferation" evidence=IMP] [GO:0007295 "growth
of a germarium-derived egg chamber" evidence=IMP] [GO:0008582
"regulation of synaptic growth at neuromuscular junction"
evidence=IMP] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
EMBL:AE014297 GO:GO:0008285 GO:GO:0007528 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0006511 GO:GO:0016360 SUPFAM:SSF75632
GO:GO:0031461 GO:GO:0008582 GO:GO:0007293 InterPro:IPR016159
SUPFAM:SSF74788 GeneTree:ENSGT00550000074299 GO:GO:0007295
HSSP:Q9JLV5 CTD:43434 KO:K10612 OMA:EVTTFQM FlyBase:FBgn0039632
EMBL:BT133427 RefSeq:NP_651665.2 UniGene:Dm.5893 SMR:Q9VAQ0
IntAct:Q9VAQ0 MINT:MINT-906434 STRING:Q9VAQ0
EnsemblMetazoa:FBtr0085417 GeneID:43434 KEGG:dme:Dmel_CG1401
UCSC:CG1401-RA InParanoid:Q9VAQ0 GenomeRNAi:43434 NextBio:833902
Uniprot:Q9VAQ0
Length = 852
Score = 447 (162.4 bits), Expect = 2.3e-41, P = 2.3e-41
Identities = 157/595 (26%), Positives = 278/595 (46%)
Query: 3 QMDSYEKDFEEHMLQDTGAYYSRKASNWILEDSCPEYMIKAEECLKKERDRVSHYLHSSS 62
+++ Y ++FE L+ T +Y K++ E+ YM A+ L++E R YL SS
Sbjct: 272 KLEIYRENFEMAYLKATVEFYRLKSAEQQQENGVLAYMKYADSKLREEEVRAKRYLEPSS 331
Query: 63 EPKLVEKVQHELLVVYATELLEKEQSGCRALLREDKVEDLSRMYRLYHKIPKGL--EPVA 120
L + + L+V + ++ + C AL+R+ + E L+ M+RL ++ G+ EP+
Sbjct: 332 FSILTYTLVNVLIVDHLNSIIAE----CPALIRDYETERLNLMFRLMDRVMHGVGVEPMM 387
Query: 121 NVFKQHITAEGTVLVQQAEDAATNQGGSSGAVQEQV-LIRKIIEL-----HD--KYM--- 169
++HI + G + A + T S V+ + L K +L +D +++
Sbjct: 388 GDLQRHIMSAGLADMLSASEVITQD--SEKYVERLLELFNKFSDLVRNAFNDDPRFLTAR 445
Query: 170 EYVTNCFINHTLFHKALKEAFEIFCNKAVG----GSSSSELLATFCDNILKKGG-NEKLS 224
+ +N T K E N+ V S ELLA +CD +L++ +++L+
Sbjct: 446 DIAFKTVVNDTSVFKM--ELPTSIANRGVKYTAPESKCPELLANYCDMLLRRTPLSKRLT 503
Query: 225 DEAIEETLEKVVKLLAYISDKDLFAEFYRKKLARRLLFDRSANDDHERSILTKLKQQ-CG 283
E I+ L V+ +L Y+++KD+F +++ L RRL+ SA+ + E I+ L++
Sbjct: 504 SEQIDARLRDVLLVLKYVNNKDVFMRYHKVHLTRRLILGTSADSEKEEDIVEWLREVGMP 563
Query: 284 GQFTSKMEGMVTDLTLARENQTSFEEYLSNNQNAHPGIDLSVTVLTTGFWPSYKSS-DLN 342
+ +++ M D+ ++ + T F +S H I++ + L G W ++
Sbjct: 564 ADYVNRLARMFQDIKVSEDLNTQFRTSISR----HDAINIKI--LNAGAWARCSERVSVS 617
Query: 343 LPSEMVKCVEVFKGFYETKTKHRKLTWIYSLGQCNINGKFEQKNIELIVSTYQAATLLLF 402
LP E+ + + FY+ K RKL W + + I +L V+T+Q A L +
Sbjct: 618 LPIELEDYIPDVEEFYKKKHSGRKLQWYHHMSNGTITFVNNFGRYDLDVTTFQMAVLFAW 677
Query: 403 NTS--DRLSYSEIMTQLNLTHDDLVRLLHSLSC---AKYKILLKEP----NTKTISQSDH 453
N D++SY + L +L R L SL K +ILL EP + K +++
Sbjct: 678 NQRQHDKISYENLRLATELPDPELRRTLWSLVAFPKIKKQILLMEPAAISSPKDFAENTM 737
Query: 454 FEFNSKFT-----DRMRRIKIPLP---PVDERKKIVED---VDKDRRYAIDAALVRIMKS 502
F N +F RR K+ L + + ED + + R A+++IMK
Sbjct: 738 FYINQEFAIVKNGKSQRRGKLNLIGRLQLSTERSQQEDNQSIVQLRILRTQEAIIKIMKV 797
Query: 503 RKVLGHQQLVSECVEQLSRMFKPDIKAIKKRMEDLITRDYLERDKENPNMFRYLA 557
RK + + L E ++ L MF P K IK+++E LI Y+ RD ++ NMF Y+A
Sbjct: 798 RKRMNNAALQGELIDILKNMFLPSKKMIKEQLEWLIENKYMRRDDDDINMFIYVA 852
>UNIPROTKB|F1SR60 [details] [associations]
symbol:F1SR60 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0031461 "cullin-RING ubiquitin ligase complex"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00884 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0006511 SUPFAM:SSF75632 GO:GO:0031461
GeneTree:ENSGT00550000074299 Ensembl:ENSSSCT00000017678 OMA:FNHRARI
Uniprot:F1SR60
Length = 308
Score = 337 (123.7 bits), Expect = 4.1e-41, Sum P(2) = 4.1e-41
Identities = 76/193 (39%), Positives = 113/193 (58%)
Query: 373 LGQCNINGKFEQKNIELIVSTYQAATLLLFNTSDRLSYSEIMTQLNLTHDDLVRLLHSLS 432
+G + G +K+I L VST+Q L+LFN ++ ++ EI + ++ +LVR L SL+
Sbjct: 117 VGGAQVTGSNTRKHI-LQVSTFQMTILMLFNNREKYTFEEIQQETDIPERELVRALQSLA 175
Query: 433 CAK--YKILLKEPNTKTISQSDHFEFNSKFTDRMRRIKIPLPPVD------ERKKIVEDV 484
C K ++L KEP +K I F N +FT ++ R+KI ERK+ + V
Sbjct: 176 CGKPTQRVLTKEPKSKEIENGHIFTVNDQFTSKLHRVKIQTVAAKQGESDPERKETRQKV 235
Query: 485 DKDRRYAIDAALVRIMKSRKVLGHQQLVSECVEQLSRMFKPDIKAIKKRMEDLITRDYLE 544
D DR++ I+AA+VRIMKSRK + H LV+E +QL F P IKKR+E LI R+YL
Sbjct: 236 DDDRKHEIEAAIVRIMKSRKKMQHNVLVAEVTQQLKARFLPSPVVIKKRIEGLIEREYLA 295
Query: 545 RDKENPNMFRYLA 557
R E+ ++ Y+A
Sbjct: 296 RTPEDRKVYTYVA 308
Score = 125 (49.1 bits), Expect = 4.1e-41, Sum P(2) = 4.1e-41
Identities = 26/74 (35%), Positives = 42/74 (56%)
Query: 310 YLSNNQNAHPGIDLSVTVLTTGFWPSYKSSD-LNLPSEMVKCVEVFKGFYETKTKHRKLT 368
+ S Q + G+DL+V VLTTG+WP+ ++ N+P E+F+ FY K R+LT
Sbjct: 30 FFSFTQVSLGGVDLTVRVLTTGYWPTQSATPKCNIPPAPRHAFEIFRRFYLAKHSGRQLT 89
Query: 369 WIYSLGQCNINGKF 382
+ +G ++N F
Sbjct: 90 LQHHMGSADLNATF 103
>SGD|S000002290 [details] [associations]
symbol:CDC53 "Cullin" species:4932 "Saccharomyces cerevisiae"
[GO:0005634 "nucleus" evidence=IEA] [GO:0031146 "SCF-dependent
proteasomal ubiquitin-dependent protein catabolic process"
evidence=IDA] [GO:0019005 "SCF ubiquitin ligase complex"
evidence=IDA;IPI] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IDA] [GO:0042787 "protein ubiquitination involved in
ubiquitin-dependent protein catabolic process" evidence=IDA]
[GO:0000086 "G2/M transition of mitotic cell cycle" evidence=IGI]
[GO:0000082 "G1/S transition of mitotic cell cycle" evidence=IMP]
[GO:0030674 "protein binding, bridging" evidence=IMP;IPI]
[GO:0051301 "cell division" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA] [GO:0031625
"ubiquitin protein ligase binding" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0031461 "cullin-RING ubiquitin ligase complex" evidence=IEA]
[GO:0003688 "DNA replication origin binding" evidence=IPI]
InterPro:IPR001373 InterPro:IPR016157 InterPro:IPR016158
InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557 PROSITE:PS01256
PROSITE:PS50069 SMART:SM00182 SMART:SM00884 SGD:S000002290
GO:GO:0005634 GO:GO:0005737 GO:GO:0000086 GO:GO:0051301
GO:GO:0000082 EMBL:BK006938 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0030674 GO:GO:0003688 GO:GO:0019005 eggNOG:COG5647
SUPFAM:SSF75632 EMBL:X96876 GO:GO:0042787 InterPro:IPR016159
SUPFAM:SSF74788 GO:GO:0031146 EMBL:U43564 EMBL:Z74180 PIR:S67675
RefSeq:NP_010150.1 PDB:3O2P PDB:3O6B PDBsum:3O2P PDBsum:3O6B
ProteinModelPortal:Q12018 SMR:Q12018 DIP:DIP-1234N IntAct:Q12018
MINT:MINT-384023 STRING:Q12018 PaxDb:Q12018 PeptideAtlas:Q12018
EnsemblFungi:YDL132W GeneID:851424 KEGG:sce:YDL132W CYGD:YDL132w
GeneTree:ENSGT00550000074299 HOGENOM:HOG000176713 KO:K03347
OMA:SGVINCY OrthoDB:EOG4W3WW4 EvolutionaryTrace:Q12018
NextBio:968633 Genevestigator:Q12018 GermOnline:YDL132W
Uniprot:Q12018
Length = 815
Score = 345 (126.5 bits), Expect = 1.7e-38, Sum P(2) = 1.7e-38
Identities = 115/470 (24%), Positives = 219/470 (46%)
Query: 4 MDSYEKDFEEHMLQDTGAYYSRKASNWILEDSCPEYMIKAEECLKKERDRVSHYLHSSSE 63
++ Y + FE+ L+ T YY++ ++++ + S EY+ +A E +K+E ++ Y ++
Sbjct: 217 LNVYIQVFEKPFLKKTQEYYTQYTNDYLEKHSVTEYIFEAHEIIKREEKAMTIYWDDHTK 276
Query: 64 PKL------------VEKVQHELLVVYATELLEKEQSGCRALLREDKVEDLSRMYRLYHK 111
L +EK+++E +V+ +EK S AL+R D + RM ++
Sbjct: 277 KPLSMALNKVLITDHIEKLENEFVVLLDARDIEKITS-LYALIRRDFTL-IPRMASVFEN 334
Query: 112 IPK--GLEPVANVFKQHITAEGTVLVQQAEDAATNQGGSSGAVQEQVLIRKIIELHDKYM 169
K G ++++ H + ++ + + ++ ++ + I+K++E+HD +
Sbjct: 335 YVKKTGENEISSLLAMH---KHNIMKNENANPKKLALMTAHSLSPKDYIKKLLEVHDIFS 391
Query: 170 EYVTNCFINHTLFHKALKEAFEIFCN-----KAVGG-----SSSSELLATFCDNILKKGG 219
+ F + KAL A F N G S +SE+LA + D +LKK
Sbjct: 392 KIFNESFPDDIPLAKALDNACGAFININEFALPAGSPKSATSKTSEMLAKYSDILLKKAT 451
Query: 220 NEKLSDEAIEETLEKVVKLLAYISDKDLFAEFYRKKLARRLLFDRSANDDHERSILTKLK 279
+++ + +E ++ + Y++DKD F YR+ A+RL+ S + + E +I+ +L+
Sbjct: 452 KPEVASDMSDED---IITIFKYLTDKDAFETHYRRLFAKRLIHGTSTSAEDEENIIQRLQ 508
Query: 280 QQCGGQFTSKMEGMVTDLTLARENQTSFEEYLSNNQNAHPGI--DLSVTVLTTGFWP-SY 336
++T K+ M D+ L++ + F L N + DL VL WP SY
Sbjct: 509 AANSMEYTGKITKMFQDIRLSKILEDDFAVALKNEPDYSKAKYPDLQPFVLAENMWPFSY 568
Query: 337 KSSDLNLPSEMVKCVEVFKGFYETKTKHRKLTWIYSL--GQCNIN-GKFEQKNIELIVST 393
+ + LP E+V E K Y K R L W++ L G+ + GK + V+
Sbjct: 569 QEVEFKLPKELVPSHEKLKESYSQKHNGRILKWLWPLCRGELKADIGKPGRMPFNFTVTL 628
Query: 394 YQAATLLLFNTSDRLSYSEIMTQLNLTHDDLVRLLHSLSCAKYKILLKEP 443
+Q A LLL+N +D L+ I +LT + + + K+K++ + P
Sbjct: 629 FQMAILLLYNDADVLTLENIQEGTSLTIQHIAAAM--VPFIKFKLIQQVP 676
Score = 139 (54.0 bits), Expect = 1.7e-38, Sum P(2) = 1.7e-38
Identities = 26/82 (31%), Positives = 53/82 (64%)
Query: 476 ERKKIVEDVDKDRRYAIDAALVRIMKSRKVLGHQQLVSECVEQLSRMFKPDIKAIKKRME 535
E ++I ++++ +R+ ++A +VRIMK+++ L H LV+EC+ Q + F + +K+ ++
Sbjct: 735 EDERIEKELNTERQIFLEACIVRIMKAKRNLPHTTLVNECIAQSHQRFNAKVSMVKRAID 794
Query: 536 DLITRDYLERDKENPNMFRYLA 557
LI + YL+R + + + YLA
Sbjct: 795 SLIQKGYLQRGDDGES-YAYLA 815
>ZFIN|ZDB-GENE-091113-45 [details] [associations]
symbol:cul5b "cullin 5b" species:7955 "Danio rerio"
[GO:0031461 "cullin-RING ubiquitin ligase complex" evidence=IEA]
[GO:0031625 "ubiquitin protein ligase binding" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
ZFIN:ZDB-GENE-091113-45 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0006511 SUPFAM:SSF75632 GO:GO:0031461 InterPro:IPR016159
SUPFAM:SSF74788 GeneTree:ENSGT00550000074299 EMBL:CT827807
IPI:IPI00897211 Ensembl:ENSDART00000130179 Bgee:F1QFY1
Uniprot:F1QFY1
Length = 795
Score = 329 (120.9 bits), Expect = 1.1e-35, Sum P(2) = 1.1e-35
Identities = 105/386 (27%), Positives = 187/386 (48%)
Query: 101 DLSRMYRLYHKIPKGLEPVANVFKQHITAEGTV-LVQQAEDAATNQGGSSGAVQEQVL-- 157
+L M+ L K+P G+EP+ + HI + G +V AE T+ S EQ+L
Sbjct: 307 ELHLMFSLMDKVPSGIEPMLKDLEDHIMSAGLADMVASAETITTD----SEKYVEQLLTL 362
Query: 158 ---IRKII-ELHDKYMEYVTN------CFINH-TLFHKALKEAFEIFCNKAVGGSSSSEL 206
K++ E ++T+ +N T+F L + K S EL
Sbjct: 363 FNRFSKLVKEAFQDDPRFLTSRDKAYKAVVNDATIFKLELPLKQKGVSLKTQPESKCPEL 422
Query: 207 LATFCDNILKKGG-NEKLSDEAIEETLEKVVKLLAYISDKDLFAEFYRKKLARRLLFDRS 265
LA +CD +L+K ++KL+ E IE L++V+ +L Y+ +KD+F +++ L RRL+ D S
Sbjct: 423 LANYCDMLLRKTPLSKKLTSEEIEAKLKEVLLVLKYVQNKDVFMRYHKAHLTRRLILDIS 482
Query: 266 ANDDHERSILTKLKQQ-CGGQFTSKMEGMVTDLTLARENQTSFEEYLSNNQNAHPGIDLS 324
A+ + E +++ L++ + +K+ M D+ ++ + SF+E +N+ A P ++
Sbjct: 483 ADSEIEENMVEWLREVGMPADYVNKLARMFQDIKVSEDLNQSFKEMHKHNKLALPADSVN 542
Query: 325 VTVLTTGFWP-SYKSSDLNLPSEMVKCVEVFKGFYETKTKHRKLTWIYSLGQCNINGKFE 383
+ +L G W S + ++LP+E+ + + FY+ RKL W + + I K E
Sbjct: 543 IKILNAGAWSRSSEKVFVSLPTELEDLIPEVEDFYKKNHSGRKLHWHHLMSNGIITFKNE 602
Query: 384 QKNIELIVSTYQAATLLLFNTS--DRLSYSEIMTQLNLTHDDLVRLLHSLSC---AKYKI 438
+L V+T+Q A L +N +R+S+ + L +L R L SL K ++
Sbjct: 603 VGQYDLEVTTFQLAVLFAWNQRPRERISFENLKLATELPDAELRRTLWSLVAFPKLKRQV 662
Query: 439 LLKEP---NTKTISQSDHFEFNSKFT 461
L EP + K ++ F N +F+
Sbjct: 663 LSYEPVVGSPKDFAEGTVFSINQEFS 688
Score = 134 (52.2 bits), Expect = 8.8e-14, Sum P(2) = 8.8e-14
Identities = 43/211 (20%), Positives = 91/211 (43%)
Query: 3 QMDSYEKDFEEHMLQDTGAYYSRKASNWILEDSCPEYMIKAEECLKKERDRVSHYLHSSS 62
++ Y ++FE+ L T +Y +A +++ ++ YM A+ L++E R YL +
Sbjct: 194 KLQIYRENFEKSYLDSTERFYKTQAPSYLQQNGVQNYMKYADGKLREEEKRALRYLETRR 253
Query: 63 EPKLVEKVQHELLVVYATELLEKEQSGCRALLREDKVE---------------DLSRMYR 107
E V+ + + T E + C +++ ++ E +L M+
Sbjct: 254 ECNSVQALMECCVNALVTSFKETILTECPGMIKRNETESEYGRSSGTKGSASSELHLMFS 313
Query: 108 LYHKIPKGLEPVANVFKQHITAEGTV-LVQQAEDAATNQGGSSGAVQEQVLIRKIIELHD 166
L K+P G+EP+ + HI + G +V AE T+ + + +++ L +
Sbjct: 314 LMDKVPSGIEPMLKDLEDHIMSAGLADMVASAETITTDS---------EKYVEQLLTLFN 364
Query: 167 KYMEYVTNCFINHTLFHKALKEAFEIFCNKA 197
++ + V F + F + +A++ N A
Sbjct: 365 RFSKLVKEAFQDDPRFLTSRDKAYKAVVNDA 395
Score = 130 (50.8 bits), Expect = 1.1e-35, Sum P(2) = 1.1e-35
Identities = 28/63 (44%), Positives = 42/63 (66%)
Query: 495 ALVRIMKSRKVLGHQQLVSECVEQLSRMFKPDIKAIKKRMEDLITRDYLERDKENPNMFR 554
A+++IMK RK + + QL +E VE L MF P K IK+++E LI Y++RD+ + N F
Sbjct: 733 AIIQIMKMRKRISNAQLQTELVEILKNMFLPQKKMIKEQIEWLIEHKYIKRDETDINTFI 792
Query: 555 YLA 557
Y+A
Sbjct: 793 YMA 795
>SGD|S000003235 [details] [associations]
symbol:CUL3 "Ubiquitin-protein ligase" species:4932
"Saccharomyces cerevisiae" [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IDA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=IEA;IC;ISS] [GO:0031461 "cullin-RING
ubiquitin ligase complex" evidence=IEA] [GO:0031625 "ubiquitin
protein ligase binding" evidence=IEA] [GO:0031463 "Cul3-RING
ubiquitin ligase complex" evidence=IMP;IDA] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0042787 "protein
ubiquitination involved in ubiquitin-dependent protein catabolic
process" evidence=IMP] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 SMART:SM00884
UniPathway:UPA00143 SGD:S000003235 GO:GO:0005634 GO:GO:0005737
EMBL:BK006941 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0004842
eggNOG:COG5647 SUPFAM:SSF75632 GO:GO:0042787 GO:GO:0031463
InterPro:IPR016159 SUPFAM:SSF74788 KO:K03869 OrthoDB:EOG48H0BR
EMBL:AY387706 EMBL:Z72788 PIR:S64292 RefSeq:NP_011517.1
ProteinModelPortal:P53202 SMR:P53202 DIP:DIP-5506N IntAct:P53202
MINT:MINT-531464 STRING:P53202 PaxDb:P53202 EnsemblFungi:YGR003W
GeneID:852886 KEGG:sce:YGR003W CYGD:YGR003w HOGENOM:HOG000112081
OMA:SERSMLV NextBio:972541 Genevestigator:P53202 GermOnline:YGR003W
Uniprot:P53202
Length = 744
Score = 393 (143.4 bits), Expect = 2.5e-34, P = 2.5e-34
Identities = 147/574 (25%), Positives = 280/574 (48%)
Query: 10 DFEEHMLQDTGAYYSRKASNWILEDSCP-EYMIKAEECLKKERDRVSHYLHSSSEPKLVE 68
DFE ++ T YY+ KA + +E P E + K + + E S +L+ S KL
Sbjct: 198 DFEPVLISATEEYYN-KAID--IELLTPIESLEKIRKLRQFESMLDSSFLNVDSHNKLKT 254
Query: 69 KVQHELLVVYATELLEKEQSGCRALLREDKVEDLSRMYRLYHKIPKGLEPVANVFKQHIT 128
+++ L+ ++++E + + ++ K+ L +Y L + K V K +I
Sbjct: 255 VLENVLIWGKLSDIIE-DLTHEAMVISNGKL--LQEIYDLSSE-EKYRVTVIESIKSYIN 310
Query: 129 AEGTVLVQQAEDAATNQGGSSGAVQEQVLIRKIIELH---DKYMEYVT--NCFINHT--- 180
+ A + N+G +I+EL+ ++E + + +N+
Sbjct: 311 -------KNAINIPFNEGNRKKGQNAITWSSEIVELYRSQHSFLESIDFGSVRLNNLTGD 363
Query: 181 LFHKALKEAFEIFCNKAVGGSSSSELLATFCDNILKKGGNEKLSDEAIEETLEKVVKLLA 240
+ + L + F ++ +K G+ SE L+T+ D+ +K+ + I++ L KL+
Sbjct: 364 VSNAILGDVFSMYFSKE--GALPSEYLSTYVDHCMKRTKEKDAEIVKIKQDLLDSTKLIG 421
Query: 241 YISDKDLFAEFYRKKLARRLLFDRSANDDHERSILTKLKQQCGGQFTSKMEGMVTDLTLA 300
+++KD+F + Y+K+L+RRLL RS + E+ ++ +K+ G FTSK+E M+ D++L+
Sbjct: 422 LLTEKDIFEKIYKKQLSRRLLQQRSLVEI-EKWMVQMIKKVLGTFFTSKLEIMLRDISLS 480
Query: 301 RENQTSFEEYLSNNQNAHPGIDLSVTVLTTGFWPSYKSSD-----LNLPSEMVKCVEVFK 355
E +F+ + N+ + + VLT WP ++S++ ++LP M + + F+
Sbjct: 481 SEMYQAFQH---STINSIEYLSFAPQVLTRTSWP-FQSTNPIDEGISLPPRMSQILAGFE 536
Query: 356 GFYETKTKHRKLTWIYSLGQCNINGKFEQKNIELIVSTYQAATLLLFNTSDRLSYSEIMT 415
G+Y K K R L W + L I +F E+ S Y LLF + L+ EI
Sbjct: 537 GYYSLKYKERVLKWAHHLSVIEIGCQFNSGYYEISFSVYAGVIFLLFEDYEELTLGEIYE 596
Query: 416 QLNLTHDDLVRLLHSLSCA-KYKILLKEPNTKTISQSDHFEFNSKFTDRMRRIKIPLP-- 472
++ DD+ L+ S+S + KIL K ++ + F N F+ R++K+P+
Sbjct: 597 LTHIPIDDVKSLVMSMSTIPRCKILKKSSSSGNMK----FSVNYFFSSPNRKVKVPVIAC 652
Query: 473 PVDERKK-------IVEDVDKDRRYAIDAALVRIMKSRKVLGHQQLVSECVEQL-SRM-F 523
P+ +K V+ D + + A +VRIMK+ L HQQL+ ++ SR+
Sbjct: 653 PLPSQKSDNLATASSVDTYDNEIVMELSAIIVRIMKTEGKLSHQQLLERTTKRTQSRLSL 712
Query: 524 KPDIKAIKKRMEDLITRDYLERDKENPNMFRYLA 557
P I +K+ ++ LI ++Y++R+ ++P+ + YL+
Sbjct: 713 TPSI--LKRSIQLLIEKEYIQRNADDPSYYHYLS 744
>FB|FBgn0036332 [details] [associations]
symbol:CG11261 species:7227 "Drosophila melanogaster"
[GO:0000152 "nuclear ubiquitin ligase complex" evidence=ISS]
[GO:0031461 "cullin-RING ubiquitin ligase complex" evidence=IEA]
[GO:0031625 "ubiquitin protein ligase binding" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] InterPro:IPR001373 InterPro:IPR016158
InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557 PROSITE:PS50069
SMART:SM00884 EMBL:AE014296 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0006511 eggNOG:COG5647 SUPFAM:SSF75632 GO:GO:0031461
InterPro:IPR016159 SUPFAM:SSF74788 GeneTree:ENSGT00550000074299
HSSP:Q9JLV5 EMBL:AY069566 RefSeq:NP_648620.1 UniGene:Dm.950
SMR:Q9VU33 EnsemblMetazoa:FBtr0075899 GeneID:39474
KEGG:dme:Dmel_CG11261 UCSC:CG11261-RA FlyBase:FBgn0036332
InParanoid:Q9VU33 OMA:IVRIMER OrthoDB:EOG4DZ09D GenomeRNAi:39474
NextBio:813830 Uniprot:Q9VU33
Length = 670
Score = 372 (136.0 bits), Expect = 7.2e-32, P = 7.2e-32
Identities = 109/386 (28%), Positives = 198/386 (51%)
Query: 183 HKALKEAFEIFCNKAVGGSSS----SELLATFCDNILKKGGNEKLSDEAIEETLEKVVKL 238
H L E + C + + + LL T+ + ++ K + S+EAI + L+++VK
Sbjct: 303 HTKLAEVVDAVCKEEINRKGQIIDPTRLLVTYANELMTK---RQESEEAIIDELKRIVKC 359
Query: 239 LAYISDKDLFAEFYRKKLARRLLFDRSANDDHERSILTKLKQQCGGQFTSKMEGMVTDLT 298
+ ++SD+ F + Y K L R + + S +D E + + L ++ T + + D+
Sbjct: 360 VEFLSDEYKFIDMYLKALRIRQINETSTSDGVESIMYSLLNKKMANFVTRCIYVQLRDVD 419
Query: 299 LARENQTSFEEYLSNNQNAHPGIDLSVTVLTTGFWPSYKSSDLNLPSEMVKCVEVFKGFY 358
R + F+++L N++ G D S+++ +L LP E+ + + F+ FY
Sbjct: 420 KLRTLKKEFQDHL-NSKGIKLGFDFRPKCFKND--GSFENFNLTLPDELQQAWKEFRIFY 476
Query: 359 ET-KTKHRKLTWIYS-LGQCNINGKFEQKNIELIVSTYQAATLLLFNTSDRLSYSEIMTQ 416
E K + + + + + L I Q L VST Q A L+LFN +R + E++T
Sbjct: 477 EARKLQSKAIIQLNNELSSGEITCHLNQSVYILEVSTLQMAVLMLFNRHERFTEQELVTA 536
Query: 417 LNLTHDDLVRLLHSLSCAKYKILLKEPNTKTISQSDHFEFNSKFTDRMRRI--KIPLP-- 472
L + +L L +L K+ + ++ +++ ++ E N FT+R RR+ PLP
Sbjct: 537 LGV---ELETLQEALKQIKFLVYIE------VNKVNYIEINMDFTNRKRRLFCNEPLPRK 587
Query: 473 --PVDERKKIVEDVDKDRRYAIDAALVRIMKSRKVLGHQQLVSECVEQLSRMFKPDIKAI 530
++E+ +I + +D++ +DAA+VRIMK +K L + +L+S E+L KP + I
Sbjct: 588 MRKIEEKSEIELKIRRDKQ--VDAAIVRIMKGQKQLEYSELISLVYEELKDRVKPQVSFI 645
Query: 531 KKRMEDLITRDYLERDKENPNMFRYL 556
KKR++ L+ R+YLERD N++RYL
Sbjct: 646 KKRLDYLVEREYLERDNYY-NIYRYL 670
>CGD|CAL0005748 [details] [associations]
symbol:orf19.7497 species:5476 "Candida albicans" [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0031463 "Cul3-RING ubiquitin ligase
complex" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0042787 "protein ubiquitination involved in ubiquitin-dependent
protein catabolic process" evidence=IEA] InterPro:IPR001373
InterPro:IPR016157 InterPro:IPR016158 InterPro:IPR019559
Pfam:PF00888 Pfam:PF10557 PROSITE:PS01256 PROSITE:PS50069
SMART:SM00182 SMART:SM00884 CGD:CAL0005748 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0006511 eggNOG:COG5647 SUPFAM:SSF75632
GO:GO:0031461 InterPro:IPR016159 SUPFAM:SSF74788 KO:K03869
EMBL:AACQ01000039 RefSeq:XP_718654.1 ProteinModelPortal:Q5AAJ3
STRING:Q5AAJ3 GeneID:3639684 KEGG:cal:CaO19.7497 Uniprot:Q5AAJ3
Length = 859
Score = 186 (70.5 bits), Expect = 3.5e-28, Sum P(3) = 3.5e-28
Identities = 33/83 (39%), Positives = 61/83 (73%)
Query: 475 DERKKIVEDVDKDRRYAIDAALVRIMKSRKVLGHQQLVSECVEQLSRMFKPDIKAIKKRM 534
+E +++ ++ + R+ ++AA+VRI+KSR+ + H L+ E ++QLS F+P I IK+R+
Sbjct: 777 EELEEVNANIMEGRKIEVNAAIVRILKSRQSIKHNDLIEELLKQLSNRFQPSIILIKQRI 836
Query: 535 EDLITRDYLERDKENPNMFRYLA 557
EDLI ++YL+RD ++ N++ Y+A
Sbjct: 837 EDLIDKEYLKRDTDDRNLYHYIA 859
Score = 165 (63.1 bits), Expect = 3.5e-28, Sum P(3) = 3.5e-28
Identities = 57/257 (22%), Positives = 109/257 (42%)
Query: 174 NCFINHTLFHKALKEAFEIFCNKAVGGSSSSELLATFCDNILK---KGG--NEKLS---D 225
N I T F A+++ + ++ ELL+ + D +K KG N+ +S
Sbjct: 407 NLMIEQT-FTFAMRDFINGSNKRGPASVNAPELLSVYMDYFIKQLTKGSSSNKDISLKSG 465
Query: 226 EAIEETLEKVVKLLAYISDKDLFAEFYRKKLARRLLFDR-----SANDDHERSILTKLKQ 280
+ E+ + ++ L +I DKD F Y A+R L + S+N D E IL KL +
Sbjct: 466 DQTEDLISNSIQFLRFIKDKDAFEANYANHFAKRFLNSKTGNSPSSNKDIEEIILAKLSE 525
Query: 281 QCGGQFTSKMEGMVTDLTLARENQTSFEEYLSNNQNAHPGIDLSVTVLTTGFWPS----- 335
+ G K+ M D+ +++ ++ YL+ + +++ + + WP
Sbjct: 526 EMGTSSLDKVIKMNRDVRSSKDTTNDWKRYLNKQSKSTDLVEMELKICNVTDWPKSMTKD 585
Query: 336 YK--------SSDLNLPSEMVKCVEVFKGFYET--KTKHRKLTWIYSLGQCNINGKFEQK 385
YK + P ++ ++ F F+ K ++ L W G ++ + +
Sbjct: 586 YKWFSRTENEETPFKWPRQLRNTIKQFDEFWSNGKKNDNKSLYWSPKFGSMDLRITYPSR 645
Query: 386 NIELIVSTYQAATLLLF 402
E+ +ST+ A +LLF
Sbjct: 646 TYEINLSTFAAIIMLLF 662
Score = 113 (44.8 bits), Expect = 8.1e-23, Sum P(3) = 8.1e-23
Identities = 32/125 (25%), Positives = 62/125 (49%)
Query: 361 KTKHRKLTWIYSLGQCNINGKFEQKNIELIVSTYQAATLLLF----NTSD---------- 406
K ++ L W G ++ + + E+ +ST+ A +LLF +D
Sbjct: 621 KNDNKSLYWSPKFGSMDLRITYPSRTYEINLSTFAAIIMLLFAPQSTNADGSTVSAFDEM 680
Query: 407 -RLSYSEIMTQLNLTHDDLVRLLHSLSCA-KYKILLKEPNTKTISQSDHFEFNSKFTDRM 464
L+Y EI+ + +L R L S++ A K ++L+K P +K ++++D F+ N+KF
Sbjct: 681 KELTYEEILELTGIPEPELKRHLQSIAVAPKSRLLVKVPMSKDVNKNDVFKLNAKFKSPS 740
Query: 465 RRIKI 469
++K+
Sbjct: 741 VKVKV 745
Score = 94 (38.1 bits), Expect = 3.5e-28, Sum P(3) = 3.5e-28
Identities = 44/208 (21%), Positives = 82/208 (39%)
Query: 5 DSYEK-DFEEHMLQDTGAYYSRKASNWILEDSCPEYMIKAEECLKKERDRVSHYLHSSSE 63
DSY + FE L+ + + ++ + +Y+ + +K E +RV YL S+
Sbjct: 216 DSYYQIKFEPKFLKSSEESLYNLSQEFVSHNLGTKYLQLTTQFIKDEDNRVRFYLPPSTY 275
Query: 64 PKLVEKVQHELLVVYATELLEKEQSGCRALLR-------ED-KVE-----DLSRMYRLYH 110
PKLVE + + ++ +++ G L+ ED +E DL +Y L
Sbjct: 276 PKLVELMNNIMIKDKIDKMILSSNQGLEYWLKPVVSNIFEDTNIETYHYADLKMLYNLIG 335
Query: 111 KIPKGLEPVANVFKQHITAEGTVLVQQAEDAATNQG---GSSGAVQEQVLIRKIIELHDK 167
+ + + K+ I A+G L + N G ++ I I++ D+
Sbjct: 336 RFDDEYQLLRLRLKEAIVAQGNSLPDYVRSSIENSGKKQSNNSPAFATKWIETILKYRDQ 395
Query: 168 YMEYVTNCFINHTLFHKALKEAFEIFCN 195
M+ N F + + + A F N
Sbjct: 396 LMQVWKNSFDENLMIEQTFTFAMRDFIN 423
Score = 37 (18.1 bits), Expect = 1.0e-12, Sum P(3) = 1.0e-12
Identities = 17/112 (15%), Positives = 49/112 (43%)
Query: 378 INGKFEQKNIELIVSTYQAATLLLFNTSDRLSYSEIMTQLNLTHDDLVRLLHSLSCAKYK 437
+N KF+ ++++ V T A++ ++S S + + ++ + +++ K
Sbjct: 732 LNAKFKSPSVKVKVLTVSASSSSSASSSSSSSKNTNKSVAKTEQEEELEEVNANIMEGRK 791
Query: 438 ILLKEPNTKTISQSDHFEFNSKFTDRMRRIKIPLPP-VDERKKIVED-VDKD 487
I + + + + N + ++++ P + K+ +ED +DK+
Sbjct: 792 IEVNAAIVRILKSRQSIKHNDLIEELLKQLSNRFQPSIILIKQRIEDLIDKE 843
>UNIPROTKB|F1P9Q4 [details] [associations]
symbol:CUL5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0031461 "cullin-RING ubiquitin ligase complex"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] InterPro:IPR001373 InterPro:IPR016158
Pfam:PF00888 PROSITE:PS50069 SMART:SM00182 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0006511 SUPFAM:SSF75632 GO:GO:0031461
InterPro:IPR016159 SUPFAM:SSF74788 GeneTree:ENSGT00550000074299
EMBL:AAEX03003515 Ensembl:ENSCAFT00000023239 Uniprot:F1P9Q4
Length = 715
Score = 333 (122.3 bits), Expect = 3.2e-27, P = 3.2e-27
Identities = 105/385 (27%), Positives = 186/385 (48%)
Query: 101 DLSRMYRLYHKIPKGLEPVANVFKQHITAEGTV-LVQQAEDAATNQGGSSGAVQEQV-LI 158
+L M+ L K+P G+EP+ ++HI + G +V AE T+ S V++ + L
Sbjct: 302 ELHLMFSLMDKVPNGIEPMLKDLEEHIISAGLADMVAAAETITTD---SEKYVEQLLTLF 358
Query: 159 RKIIELHDKYMEYVTNCFINHTLFHKALKEAFEIFC------NKAVG-----GSSSSELL 207
+ +L + + +KA+ IF K VG S ELL
Sbjct: 359 NRFSKLVKEAFQDDPRFLTARDKAYKAVVNDATIFKLELPLKQKGVGLKTQPESKCPELL 418
Query: 208 ATFCDNILKKGG-NEKLSDEAIEETLEKVVKLLAYISDKDLFAEFYRKKLARRLLFDRSA 266
A +CD +L+K ++KL+ E IE L++V+ +L Y+ +KD+F +++ L RRL+ D SA
Sbjct: 419 ANYCDMLLRKTPLSKKLTSEEIEAKLKEVLLVLKYVQNKDVFMRYHKAHLTRRLILDISA 478
Query: 267 NDDHERSILTKLKQQ-CGGQFTSKMEGMVTDLTLARENQTSFEEYLSNNQNAHPGIDLSV 325
+ + E +++ L++ + +K+ M D+ ++ + +F+E NN+ A P +++
Sbjct: 479 DSEIEENMVEWLREVGMPADYVNKLARMFQDIKVSEDLNQAFKEMHKNNKLALPADSVNI 538
Query: 326 TVLTTGFWP-SYKSSDLNLPSEMVKCVEVFKGFYETKTKHRKLTWIYSLGQCNINGKFEQ 384
+L G W S + ++LP+E+ + + FY+ RKL W + + I K E
Sbjct: 539 KILNAGAWSRSSEKVFVSLPTELEDLIPEVEEFYKKNHSGRKLHWHHLMSNGIITFKNEV 598
Query: 385 KNIELIVSTYQAATLLLFNTSDR--LSYSEIMTQLNLTHDDLVRLLHSLSC---AKYKIL 439
+L V+T+Q A L +N R +S+ + L +L R L SL K ++L
Sbjct: 599 GQYDLEVTTFQLAVLFAWNQRPREKISFENLKLATELPDAELRRTLWSLVAFPKLKRQVL 658
Query: 440 LKEPNT---KTISQSDHFEFNSKFT 461
L EP K ++ F N +F+
Sbjct: 659 LYEPQVNSPKDFTEGTLFSVNQEFS 683
Score = 145 (56.1 bits), Expect = 1.8e-06, P = 1.8e-06
Identities = 48/211 (22%), Positives = 93/211 (44%)
Query: 3 QMDSYEKDFEEHMLQDTGAYYSRKASNWILEDSCPEYMIKAEECLKKERDRVSHYLHSSS 62
++ Y +FE+ L T +Y +A +++ ++ YM A+ LK+E R YL +
Sbjct: 189 KLQIYRDNFEKAYLDSTERFYRTQAPSYLQQNGVQNYMKYADAKLKEEEKRALRYLETRR 248
Query: 63 EPKLVEKVQHELLVVYATELLEKEQSGCRALLREDK---------VED------LSRMYR 107
E VE + + T E + C+ +++ ++ VED L M+
Sbjct: 249 ECNSVEALMECCVNALVTSFKETILAECQGMIKRNETESRYQYLCVEDGSGFSELHLMFS 308
Query: 108 LYHKIPKGLEPVANVFKQHITAEGTV-LVQQAEDAATNQGGSSGAVQEQVLIRKIIELHD 166
L K+P G+EP+ ++HI + G +V AE T+ + + +++ L +
Sbjct: 309 LMDKVPNGIEPMLKDLEEHIISAGLADMVAAAETITTDS---------EKYVEQLLTLFN 359
Query: 167 KYMEYVTNCFINHTLFHKALKEAFEIFCNKA 197
++ + V F + F A +A++ N A
Sbjct: 360 RFSKLVKEAFQDDPRFLTARDKAYKAVVNDA 390
>UNIPROTKB|F1RUC1 [details] [associations]
symbol:CUL4B "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0031461 "cullin-RING ubiquitin ligase complex"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] InterPro:IPR001373 InterPro:IPR016158
Pfam:PF00888 PROSITE:PS50069 GO:GO:0006511 SUPFAM:SSF75632
GO:GO:0031461 InterPro:IPR016159 SUPFAM:SSF74788
GeneTree:ENSGT00550000074299 EMBL:CU693400
Ensembl:ENSSSCT00000013782 OMA:SSTERED Uniprot:F1RUC1
Length = 700
Score = 294 (108.6 bits), Expect = 7.4e-23, P = 7.4e-23
Identities = 82/280 (29%), Positives = 153/280 (54%)
Query: 15 MLQDTGAYYSRKASNWILEDSCPEYMIKAEECLKKERDRVSHYLHSSSE------PKLV- 67
ML D Y + LE++ Y + ++ L +ER+ V YLH ++ +L+
Sbjct: 427 MLSDLQIYQDSFEQRF-LEETNRLYAAEGQK-LMQERE-VPEYLHHVNKRLEEEADRLIT 483
Query: 68 ---EKVQHELLVVYATELLEKE-----QSGCRALLREDKVEDLSRMYRLYHKIPKGLEPV 119
+ Q L+ +LL + Q G LL E++++DLS +Y+L+ ++ G++ +
Sbjct: 484 YLDQTTQKSLIATVEKQLLGEHLTAILQKGLNNLLDENRIQDLSLLYQLFSRVRGGVQVL 543
Query: 120 ANVFKQHITAEGTVLVQQAEDAATNQGGSSGAVQEQVLIRKIIELHDKYMEYVTNCFINH 179
+ ++I A G+ +V E +++ +++++++ DK + CF+ +
Sbjct: 544 LQQWIEYIKAFGSTIVINPE-------------KDKTMVQELLDFKDKVDHIIDICFLKN 590
Query: 180 TLFHKALKEAFEIFCNKAVGGSSSSELLATFCDNILKKGGNEKLSDEAIEETLEKVVKLL 239
F A+KEAFE F NK + +EL+A + D+ L+ GN++ +DE +E+ L+K++ +
Sbjct: 591 EKFINAMKEAFETFINKRP--NKPAELIAKYVDSKLR-AGNKEATDEELEKMLDKIMIIF 647
Query: 240 AYISDKDLFAEFYRKKLARRLLFDRSANDDHERSILTKLK 279
+I KD+F FY+K LA+RLL +SA+ D E+S+L+KLK
Sbjct: 648 RFIYGKDVFEAFYKKDLAKRLLVGKSASVDAEKSMLSKLK 687
Score = 235 (87.8 bits), Expect = 2.5e-16, P = 2.5e-16
Identities = 52/196 (26%), Positives = 106/196 (54%)
Query: 1 MGQMDSYEKDFEEHMLQDTGAYYSRKASNWILEDSCPEYMIKAEECLKKERDRVSHYLHS 60
+ + Y+ FE+ L++T Y+ + + E PEY+ + L++E DR+ YL
Sbjct: 428 LSDLQIYQDSFEQRFLEETNRLYAAEGQKLMQEREVPEYLHHVNKRLEEEADRLITYLDQ 487
Query: 61 SSEPKLVEKVQHELLVVYATELLEKEQSGCRALLREDKVEDLSRMYRLYHKIPKGLEPVA 120
+++ L+ V+ +LL + T +L+K G LL E++++DLS +Y+L+ ++ G++ +
Sbjct: 488 TTQKSLIATVEKQLLGEHLTAILQK---GLNNLLDENRIQDLSLLYQLFSRVRGGVQVLL 544
Query: 121 NVFKQHITAEGTVLVQQAEDAATNQGGSSGAVQEQVLIRKIIELHDKYMEYVTNCFINHT 180
+ ++I A G+ +V E +++ +++++++ DK + CF+ +
Sbjct: 545 QQWIEYIKAFGSTIVINPE-------------KDKTMVQELLDFKDKVDHIIDICFLKNE 591
Query: 181 LFHKALKEAFEIFCNK 196
F A+KEAFE F NK
Sbjct: 592 KFINAMKEAFETFINK 607
>TAIR|locus:2025941 [details] [associations]
symbol:AT1G59800 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0031461 "cullin-RING ubiquitin ligase complex" evidence=IEA]
[GO:0031625 "ubiquitin protein ligase binding" evidence=IEA]
InterPro:IPR001373 Pfam:PF00888 PROSITE:PS01256 PROSITE:PS50069
EMBL:CP002684 GenomeReviews:CT485782_GR EMBL:AC007258 GO:GO:0006511
GO:GO:0031461 InterPro:IPR016159 SUPFAM:SSF74788 KO:K03347
HOGENOM:HOG000176712 IPI:IPI00546899 PIR:A96622 RefSeq:NP_176189.1
UniGene:At.52274 ProteinModelPortal:Q9XIE8 SMR:Q9XIE8
EnsemblPlants:AT1G59800.1 GeneID:842273 KEGG:ath:AT1G59800
TAIR:At1g59800 eggNOG:NOG310081 InParanoid:Q9XIE8 OMA:DECMLRE
PhylomeDB:Q9XIE8 ProtClustDB:CLSN2913533 Genevestigator:Q9XIE8
Uniprot:Q9XIE8
Length = 255
Score = 236 (88.1 bits), Expect = 5.1e-19, P = 5.1e-19
Identities = 41/76 (53%), Positives = 60/76 (78%)
Query: 1 MGQMDSYEKDFEEHMLQDTGAYYSRKASNWILEDSCPEYMIKAEECLKKERDRVSHYLHS 60
MG + YE+DFE MLQDT +YYS KAS WI E+SC +Y +K ++CL++ER+RV+HYLH
Sbjct: 179 MGTLKKYEEDFERLMLQDTASYYSSKASRWIQEESCLDYTLKPQQCLQRERERVTHYLHP 238
Query: 61 SSEPKLVEKVQHELLV 76
++EPKL E V++ +++
Sbjct: 239 TTEPKLFE-VRYGIII 253
>GENEDB_PFALCIPARUM|PFF1445c [details] [associations]
symbol:PFF1445c "cullin-like protein, putative"
species:5833 "Plasmodium falciparum" [GO:0000082 "G1/S transition
of mitotic cell cycle" evidence=IMP] [GO:0051726 "regulation of
cell cycle" evidence=ISS] InterPro:IPR001373 InterPro:IPR016158
InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557 PROSITE:PS50069
SMART:SM00182 SMART:SM00884 GO:GO:0000082 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0051726 GO:GO:0006511 SUPFAM:SSF75632
GO:GO:0031461 InterPro:IPR016159 SUPFAM:SSF74788 EMBL:AL844505
RefSeq:XP_966280.1 ProteinModelPortal:C6KTD3 PRIDE:C6KTD3
EnsemblProtists:PFF1445c:mRNA GeneID:3885751 KEGG:pfa:PFF1445c
EuPathDB:PlasmoDB:PF3D7_0629800 HOGENOM:HOG000281645
ProtClustDB:CLSZ2432214 Uniprot:C6KTD3
Length = 1129
Score = 186 (70.5 bits), Expect = 9.8e-16, Sum P(2) = 9.8e-16
Identities = 55/222 (24%), Positives = 101/222 (45%)
Query: 165 HDKYMEYVTNCFINHTLFHKALKEAFEIFCNKAVGGSSSSELLATFCDNILKKGGNEKLS 224
H+ + + N + N+ + ++ I NK LL D + KK +
Sbjct: 641 HNDNIYFNNNLYFNNDYHNNLYYDSLNI--NKRSDEKIFFHLLKI--DKLFKK---YHII 693
Query: 225 DEAIEETLEKVVKLLAYISDKDLFAEFYRKKLARRLLFDRSANDDHERSILTKLKQQCGG 284
+ I + ++ L Y+SDK+ F ++YR + +RL+ D S N + + LK++CG
Sbjct: 694 GKYIMNMITVILSLFRYVSDKEKFEKYYRTYMCKRLINDSSFNIILDVKVFKTLKKECGA 753
Query: 285 QFTSKMEGMVTDLTLARENQTSFEEYLSNNQNAH-PGIDLSVTVLTTGFWPSYKSSDLNL 343
QFT K+E ++ D+ + F + L NN N +V ++ W Y +++ N+
Sbjct: 754 QFTKKIEIILKDMKFTSKTLMKFYKELPNNVNHFLKRKKYAVNIIFNESW-EYVNTENNV 812
Query: 344 --PSEMVKCVEVFKGFYETKTKHRKLTWIYSLGQCNINGKFE 383
P + C E F FY+ K + + ++ LG C + F+
Sbjct: 813 IYPPMIKMCNEAFFLFYQKYNKSKNIKFLPLLGLCTLRVHFK 854
Score = 106 (42.4 bits), Expect = 4.2e-07, Sum P(2) = 4.2e-07
Identities = 50/220 (22%), Positives = 97/220 (44%)
Query: 4 MDSYEKDFEEHMLQDTGAYYSRKASNWILE------DSCP-EYMIKAEECLKKERDRVSH 56
++ Y+ DFE +T +Y K + + + C ++ I E L E+ R
Sbjct: 330 LNLYD-DFERIYKNETYTFYKEKIEKYKKDMETLGYEECNFDFPIIVENYLCHEQIRSRK 388
Query: 57 YLHSSSEPKLVEKVQHELLVVYATELLEKEQSGCRALLREDKVEDLSRMYRLYHKIPKGL 116
+L +E ++ ++ +LL+V ++L K+ S + + ++K + L +Y LY L
Sbjct: 389 FLKEHTEITILNMLK-DLLLVKNRDVLFKD-SYIKYCIIKEKYDPLRSVY-LYSLNLDDL 445
Query: 117 EPVANVFKQHITAEGTVLVQQAEDAATNQGGSSGAVQEQVLIRKIIELHDKYMEYVTNCF 176
E +N+F + GT LV N+ +S + ++ K+I + F
Sbjct: 446 ENFSNIFFNVVDNIGTELVNDV----INKRNNSSLLNNAII--KLINFKLNVDRIIIMSF 499
Query: 177 INHTLFHKALKEAFEIFCNKAVGGSSSSEL-LATFCDNIL 215
+ F K +E FE F NK + + + L+ + +N+L
Sbjct: 500 RYSSYFMKKWREVFEHFINKGIQAETYMPIILSMYLNNLL 539
Score = 98 (39.6 bits), Expect = 9.8e-16, Sum P(2) = 9.8e-16
Identities = 34/163 (20%), Positives = 78/163 (47%)
Query: 384 QKNIELIVSTYQAATLLLFNTSDRLSYSEIMTQLNLTHDDLVRLLHSL-SCAKYKILLKE 442
+K I + V+ QA LLLFN + +EI ++ ++++R L ++ + + IL+ +
Sbjct: 959 KKKIYITVTILQALVLLLFNKKNEYHINEIKELTGISTENIIRYLKTIYTIGETHILIYD 1018
Query: 443 PNTKTISQSDHFEFNSKFTDRMRRIKIPLPPVDERKKIV-EDVD-KDRRYAIDAALVRIM 500
+ + + F KF + + ++ ED + +D+ IDAA+V+ +
Sbjct: 1019 KANEILKLNFSFRSKKKFLIVNYNDVLYKDDMGPTTSLLNEDNEIEDKTLHIDAAIVKFL 1078
Query: 501 KSRKVLGHQQLVSECVEQLSRMFKPDIKAIKKRMEDLITRDYL 543
K+ +++ S +++ + IK R+ L++R+++
Sbjct: 1079 KTNGKSSERKICSFIKDKMDISSN---EQIKNRISSLLSREFI 1118
>UNIPROTKB|C6KTD3 [details] [associations]
symbol:PFF1445c "Cullin-like protein, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0000082 "G1/S
transition of mitotic cell cycle" evidence=IMP] [GO:0051726
"regulation of cell cycle" evidence=ISS] InterPro:IPR001373
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS50069 SMART:SM00182 SMART:SM00884 GO:GO:0000082
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0051726 GO:GO:0006511
SUPFAM:SSF75632 GO:GO:0031461 InterPro:IPR016159 SUPFAM:SSF74788
EMBL:AL844505 RefSeq:XP_966280.1 ProteinModelPortal:C6KTD3
PRIDE:C6KTD3 EnsemblProtists:PFF1445c:mRNA GeneID:3885751
KEGG:pfa:PFF1445c EuPathDB:PlasmoDB:PF3D7_0629800
HOGENOM:HOG000281645 ProtClustDB:CLSZ2432214 Uniprot:C6KTD3
Length = 1129
Score = 186 (70.5 bits), Expect = 9.8e-16, Sum P(2) = 9.8e-16
Identities = 55/222 (24%), Positives = 101/222 (45%)
Query: 165 HDKYMEYVTNCFINHTLFHKALKEAFEIFCNKAVGGSSSSELLATFCDNILKKGGNEKLS 224
H+ + + N + N+ + ++ I NK LL D + KK +
Sbjct: 641 HNDNIYFNNNLYFNNDYHNNLYYDSLNI--NKRSDEKIFFHLLKI--DKLFKK---YHII 693
Query: 225 DEAIEETLEKVVKLLAYISDKDLFAEFYRKKLARRLLFDRSANDDHERSILTKLKQQCGG 284
+ I + ++ L Y+SDK+ F ++YR + +RL+ D S N + + LK++CG
Sbjct: 694 GKYIMNMITVILSLFRYVSDKEKFEKYYRTYMCKRLINDSSFNIILDVKVFKTLKKECGA 753
Query: 285 QFTSKMEGMVTDLTLARENQTSFEEYLSNNQNAH-PGIDLSVTVLTTGFWPSYKSSDLNL 343
QFT K+E ++ D+ + F + L NN N +V ++ W Y +++ N+
Sbjct: 754 QFTKKIEIILKDMKFTSKTLMKFYKELPNNVNHFLKRKKYAVNIIFNESW-EYVNTENNV 812
Query: 344 --PSEMVKCVEVFKGFYETKTKHRKLTWIYSLGQCNINGKFE 383
P + C E F FY+ K + + ++ LG C + F+
Sbjct: 813 IYPPMIKMCNEAFFLFYQKYNKSKNIKFLPLLGLCTLRVHFK 854
Score = 106 (42.4 bits), Expect = 4.2e-07, Sum P(2) = 4.2e-07
Identities = 50/220 (22%), Positives = 97/220 (44%)
Query: 4 MDSYEKDFEEHMLQDTGAYYSRKASNWILE------DSCP-EYMIKAEECLKKERDRVSH 56
++ Y+ DFE +T +Y K + + + C ++ I E L E+ R
Sbjct: 330 LNLYD-DFERIYKNETYTFYKEKIEKYKKDMETLGYEECNFDFPIIVENYLCHEQIRSRK 388
Query: 57 YLHSSSEPKLVEKVQHELLVVYATELLEKEQSGCRALLREDKVEDLSRMYRLYHKIPKGL 116
+L +E ++ ++ +LL+V ++L K+ S + + ++K + L +Y LY L
Sbjct: 389 FLKEHTEITILNMLK-DLLLVKNRDVLFKD-SYIKYCIIKEKYDPLRSVY-LYSLNLDDL 445
Query: 117 EPVANVFKQHITAEGTVLVQQAEDAATNQGGSSGAVQEQVLIRKIIELHDKYMEYVTNCF 176
E +N+F + GT LV N+ +S + ++ K+I + F
Sbjct: 446 ENFSNIFFNVVDNIGTELVNDV----INKRNNSSLLNNAII--KLINFKLNVDRIIIMSF 499
Query: 177 INHTLFHKALKEAFEIFCNKAVGGSSSSEL-LATFCDNIL 215
+ F K +E FE F NK + + + L+ + +N+L
Sbjct: 500 RYSSYFMKKWREVFEHFINKGIQAETYMPIILSMYLNNLL 539
Score = 98 (39.6 bits), Expect = 9.8e-16, Sum P(2) = 9.8e-16
Identities = 34/163 (20%), Positives = 78/163 (47%)
Query: 384 QKNIELIVSTYQAATLLLFNTSDRLSYSEIMTQLNLTHDDLVRLLHSL-SCAKYKILLKE 442
+K I + V+ QA LLLFN + +EI ++ ++++R L ++ + + IL+ +
Sbjct: 959 KKKIYITVTILQALVLLLFNKKNEYHINEIKELTGISTENIIRYLKTIYTIGETHILIYD 1018
Query: 443 PNTKTISQSDHFEFNSKFTDRMRRIKIPLPPVDERKKIV-EDVD-KDRRYAIDAALVRIM 500
+ + + F KF + + ++ ED + +D+ IDAA+V+ +
Sbjct: 1019 KANEILKLNFSFRSKKKFLIVNYNDVLYKDDMGPTTSLLNEDNEIEDKTLHIDAAIVKFL 1078
Query: 501 KSRKVLGHQQLVSECVEQLSRMFKPDIKAIKKRMEDLITRDYL 543
K+ +++ S +++ + IK R+ L++R+++
Sbjct: 1079 KTNGKSSERKICSFIKDKMDISSN---EQIKNRISSLLSREFI 1118
>UNIPROTKB|F1NLT0 [details] [associations]
symbol:ANAPC2 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0031625 "ubiquitin protein ligase
binding" evidence=IEA] [GO:0005680 "anaphase-promoting complex"
evidence=IEA] [GO:0031915 "positive regulation of synaptic
plasticity" evidence=IEA] [GO:0070979 "protein K11-linked
ubiquitination" evidence=IEA] [GO:0090129 "positive regulation of
synapse maturation" evidence=IEA] InterPro:IPR001373
InterPro:IPR016158 Pfam:PF00888 PROSITE:PS50069 SMART:SM00182
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006511 GO:GO:0005680
OMA:MLRGVLF GO:GO:0031915 GO:GO:0070979 InterPro:IPR014786
Pfam:PF08672 SMART:SM01013 SUPFAM:SSF75632
GeneTree:ENSGT00390000016127 EMBL:AADN02026919 IPI:IPI00604035
Ensembl:ENSGALT00000014053 Uniprot:F1NLT0
Length = 820
Score = 192 (72.6 bits), Expect = 1.7e-11, P = 1.7e-11
Identities = 60/227 (26%), Positives = 100/227 (44%)
Query: 235 VVKLLAYI-SDKDLFAEFYRKKLARRLLFDRSANDDHERSILTKLKQQCGGQFTSKMEGM 293
++ LL I KDLF YR LA RLL + + + E + LK + G E M
Sbjct: 499 IISLLVSIYGSKDLFINEYRTLLADRLLHQFNYSAEREIRNVELLKLRFGEAQMHYCEVM 558
Query: 294 VTDLTLARE-NQTSFEEYLSNNQNAHPGIDLSVTVLTTGFWPSYKSSDLNLPSEMVKCVE 352
+ D+ +R N +E + P L +L++ FWP K L LP ++ + +E
Sbjct: 559 LKDMADSRRINANIRDEEEKLPEEERPPFSLVAVILSSEFWPPLKEEKLELPEQVKEAME 618
Query: 353 VFKGFYETKTKHRKLTWIYSLGQCNINGKFEQKNIELIVSTYQAATLLLFNTSDRLSYSE 412
+ YE R L W Y LG +++ + + + L VS AA +L F T + +E
Sbjct: 619 AYSKKYEKLKAMRTLNWKYHLGLVSLDVELADRTLSLSVSPVHAAIILHFQTKSTWTLAE 678
Query: 413 IMTQLNLTHDDLVRLLHSLSCAKYKILLKEPNTKTISQSDHFEFNSK 459
+ L + L R + +L + + + P T T+ + + + K
Sbjct: 679 LSEVLKVPVTSLKRKM-TLWLQQGVLREEPPGTFTVIEEEQKDQGEK 724
>ASPGD|ASPL0000051025 [details] [associations]
symbol:AN10258 species:162425 "Emericella nidulans"
[GO:0005829 "cytosol" evidence=IEA] [GO:0005680 "anaphase-promoting
complex" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0031625 "ubiquitin protein
ligase binding" evidence=IEA] InterPro:IPR001373 InterPro:IPR016158
Pfam:PF00888 PROSITE:PS50069 EMBL:BN001307 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0006511 InterPro:IPR014786 Pfam:PF08672
SMART:SM01013 SUPFAM:SSF75632 GO:GO:0031461
EnsemblFungi:CADANIAT00008784 OMA:TWQATVI Uniprot:C8VLZ0
Length = 918
Score = 192 (72.6 bits), Expect = 1.9e-11, P = 1.9e-11
Identities = 60/215 (27%), Positives = 101/215 (46%)
Query: 238 LLAYISDKDLFAEFYRKKLARRLLFDRSANDDHERSILTKLKQQCGGQFTSKMEGMVTDL 297
L++ K+ F R LA RLL R A + E S+L LK + G E M+ D+
Sbjct: 579 LISIFDSKETFVRELRDMLADRLLQKR-AEFEQEMSVLELLKLRFGDNALQACEVMLRDI 637
Query: 298 TLARENQTSF--EEYLSNNQNAHPGIDLSVTVLTTGFWPSYKSSDLNLPSEMVKCVEVFK 355
+R T ++ ++N+Q+ +L +L+ FWP K +PSE+ + + +
Sbjct: 638 FDSRRVDTVVRNDQGMTNSQDQETP-ELHAKILSHFFWPELKGHQFKVPSEITELQQRYA 696
Query: 356 GFYETKTKHRKLTWIYSLGQCNINGKFEQKNIELIVSTYQAATLLLFN--TSDRLSYSEI 413
+E+ + RKLTW+ GQ + E + VST+QA + FN T++ S S+
Sbjct: 697 EGFESLKQSRKLTWLNGFGQVTVELDLEDRVFVEEVSTWQATVIYAFNSGTAESESVSKT 756
Query: 414 MTQLNLTHDDLVRLLHS--LSCAKYKILLKEPNTK 446
+ +L+ D L+ S L +IL + P +
Sbjct: 757 IPELSAQLDMSAALVRSACLFWVSRRILTEVPGQR 791
>RGD|1305546 [details] [associations]
symbol:Anapc2 "anaphase promoting complex subunit 2"
species:10116 "Rattus norvegicus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005634 "nucleus" evidence=IDA] [GO:0005680
"anaphase-promoting complex" evidence=ISO] [GO:0031915 "positive
regulation of synaptic plasticity" evidence=ISO] [GO:0045773
"positive regulation of axon extension" evidence=IMP] [GO:0050775
"positive regulation of dendrite morphogenesis" evidence=IMP]
[GO:0070979 "protein K11-linked ubiquitination" evidence=ISO]
[GO:0090129 "positive regulation of synapse maturation"
evidence=ISO] InterPro:IPR001373 InterPro:IPR016158 Pfam:PF00888
PROSITE:PS50069 SMART:SM00182 RGD:1305546 GO:GO:0005634
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0050775 GO:GO:0045773
GO:GO:0006511 GO:GO:0005680 HOVERGEN:HBG045327 GO:GO:0090129
GO:GO:0031915 GO:GO:0070979 InterPro:IPR014786 Pfam:PF08672
SMART:SM01013 SUPFAM:SSF75632 EMBL:BC107471 IPI:IPI00373399
UniGene:Rn.20099 STRING:Q3B7T7 PhosphoSite:Q3B7T7 UCSC:RGD:1305546
InParanoid:Q3B7T7 ArrayExpress:Q3B7T7 Genevestigator:Q3B7T7
Uniprot:Q3B7T7
Length = 539
Score = 170 (64.9 bits), Expect = 2.1e-09, P = 2.1e-09
Identities = 50/179 (27%), Positives = 83/179 (46%)
Query: 235 VVKLLAYI-SDKDLFAEFYRKKLARRLLFDRSANDDHERSILTKLKQQCGGQFTSKMEGM 293
++ LL I KDLF YR LA RLL S + + E + LK + G E M
Sbjct: 218 IISLLVSIYGSKDLFINEYRSLLADRLLHQFSFSPEREIRNVELLKLRFGEAPMHFCEVM 277
Query: 294 VTDLTLARE-NQTSFEEYLSNNQNAHPGIDLSVTVLTTGFWPSYKSSDLNLPSEMVKCVE 352
+ D+ +R N EE P + +L++ FWP +K L +P ++ ++
Sbjct: 278 LKDMADSRRINANIREEDEKRPVEEQPPFGVYAVILSSEFWPPFKDEKLEVPEDIRAALD 337
Query: 353 VFKGFYETKTKHRKLTWIYSLGQCNINGKFEQKNIELIVSTYQAATLLLFNTSDRLSYS 411
V+ YE R L+W ++LG ++ + + + + V+ QA LL F D+ S++
Sbjct: 338 VYCKKYEKLKAMRTLSWKHTLGLVTMDVELADRTLSVAVTPVQAVVLLYFQ--DQASWT 394
>MGI|MGI:2139135 [details] [associations]
symbol:Anapc2 "anaphase promoting complex subunit 2"
species:10090 "Mus musculus" [GO:0005634 "nucleus" evidence=ISO]
[GO:0005680 "anaphase-promoting complex" evidence=ISO] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0007067 "mitosis"
evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0031461 "cullin-RING ubiquitin ligase complex" evidence=IEA]
[GO:0031625 "ubiquitin protein ligase binding" evidence=IEA]
[GO:0031915 "positive regulation of synaptic plasticity"
evidence=IDA] [GO:0045773 "positive regulation of axon extension"
evidence=ISO] [GO:0050775 "positive regulation of dendrite
morphogenesis" evidence=ISO] [GO:0051301 "cell division"
evidence=IEA] [GO:0070979 "protein K11-linked ubiquitination"
evidence=ISO] [GO:0090129 "positive regulation of synapse
maturation" evidence=IDA] InterPro:IPR001373 InterPro:IPR016158
Pfam:PF00888 PROSITE:PS50069 SMART:SM00182 UniPathway:UPA00143
MGI:MGI:2139135 GO:GO:0051301 GO:GO:0007067 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0050775 GO:GO:0045773 GO:GO:0006511
GO:GO:0005680 CTD:29882 eggNOG:COG5647 HOVERGEN:HBG045327 KO:K03349
OMA:MLRGVLF OrthoDB:EOG4T1HM4 GO:GO:0090129 GO:GO:0031915
GO:GO:0070979 InterPro:IPR014786 Pfam:PF08672 SMART:SM01013
SUPFAM:SSF75632 EMBL:AK033784 EMBL:AK170676 EMBL:AL732309
EMBL:BC027351 EMBL:BC137583 IPI:IPI00227654 RefSeq:NP_780509.2
UniGene:Mm.291624 ProteinModelPortal:Q8BZQ7 SMR:Q8BZQ7
STRING:Q8BZQ7 PhosphoSite:Q8BZQ7 PaxDb:Q8BZQ7 PRIDE:Q8BZQ7
Ensembl:ENSMUST00000028341 GeneID:99152 KEGG:mmu:99152
GeneTree:ENSGT00390000016127 InParanoid:Q3TCK5 NextBio:353811
Bgee:Q8BZQ7 CleanEx:MM_ANAPC2 Genevestigator:Q8BZQ7
GermOnline:ENSMUSG00000026965 Uniprot:Q8BZQ7
Length = 837
Score = 170 (64.9 bits), Expect = 1.2e-08, Sum P(2) = 1.2e-08
Identities = 49/181 (27%), Positives = 81/181 (44%)
Query: 235 VVKLLAYI-SDKDLFAEFYRKKLARRLLFDRSANDDHERSILTKLKQQCGGQFTSKMEGM 293
++ LL I KDLF YR LA RLL S + + E + LK + G E M
Sbjct: 516 IISLLVSIYGSKDLFINEYRSLLADRLLHQFSFSPEREIRNVELLKLRFGEAPMHFCEVM 575
Query: 294 VTDLTLARE-NQTSFEEYLSNNQNAHPGIDLSVTVLTTGFWPSYKSSDLNLPSEMVKCVE 352
+ D+ +R N EE P + +L++ FWP +K L +P ++ ++
Sbjct: 576 LKDMADSRRINANIREEDEKRPVEEQPPFGVYAVILSSEFWPPFKDEKLEVPEDIRAALD 635
Query: 353 VFKGFYETKTKHRKLTWIYSLGQCNINGKFEQKNIELIVSTYQAATLLLFNTSDRLSYSE 412
V+ YE R L+W ++LG ++ + + + + V+ QA LL F + E
Sbjct: 636 VYCKKYEKLKAMRTLSWKHTLGLVTMDVELADRTLSVAVTPVQAVVLLYFQNQASWTLEE 695
Query: 413 I 413
+
Sbjct: 696 L 696
Score = 43 (20.2 bits), Expect = 1.2e-08, Sum P(2) = 1.2e-08
Identities = 12/26 (46%), Positives = 15/26 (57%)
Query: 56 HYLHSSSEPKLVEKVQHELLVVYATE 81
H LHS E VE +Q++L ATE
Sbjct: 80 HGLHSVLEEWFVEVLQNDLQGNIATE 105
>UNIPROTKB|F1PYP1 [details] [associations]
symbol:TMEM210 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0031625 "ubiquitin protein ligase
binding" evidence=IEA] [GO:0031461 "cullin-RING ubiquitin ligase
complex" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=IEA] InterPro:IPR001373
InterPro:IPR016158 Pfam:PF00888 PROSITE:PS50069 SMART:SM00182
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006511 OMA:MLRGVLF
InterPro:IPR014786 Pfam:PF08672 SMART:SM01013 SUPFAM:SSF75632
GO:GO:0031461 GeneTree:ENSGT00390000008939 EMBL:AAEX03006734
Ensembl:ENSCAFT00000030976 Uniprot:F1PYP1
Length = 885
Score = 175 (66.7 bits), Expect = 1.3e-08, Sum P(2) = 1.3e-08
Identities = 50/181 (27%), Positives = 82/181 (45%)
Query: 235 VVKLLAYI-SDKDLFAEFYRKKLARRLLFDRSANDDHERSILTKLKQQCGGQFTSKMEGM 293
++ LL I KDLF YR LA RLL S + + E + LK + G E M
Sbjct: 497 IISLLVSIYGSKDLFINEYRSLLADRLLHQFSFSPEREIRNVELLKLRFGEAPMHFCEVM 556
Query: 294 VTDLTLARE-NQTSFEEYLSNNQNAHPGIDLSVTVLTTGFWPSYKSSDLNLPSEMVKCVE 352
+ D+ +R N EE P + +L++ FWP +K L +P ++ + +E
Sbjct: 557 LKDMADSRRINANIREEDEKRPAEEQPPFGVYAVILSSEFWPPFKDEKLEVPEDIREALE 616
Query: 353 VFKGFYETKTKHRKLTWIYSLGQCNINGKFEQKNIELIVSTYQAATLLLFNTSDRLSYSE 412
V+ YE R L+W ++LG ++ + + + + V+ QA LL F + E
Sbjct: 617 VYCKKYEKLKAMRTLSWKHTLGLVTMDVELADRTLSVAVTPVQAVVLLYFQDQATWTLEE 676
Query: 413 I 413
+
Sbjct: 677 L 677
Score = 38 (18.4 bits), Expect = 1.3e-08, Sum P(2) = 1.3e-08
Identities = 9/19 (47%), Positives = 12/19 (63%)
Query: 56 HYLHSSSEPKLVEKVQHEL 74
H LHS E VE +Q++L
Sbjct: 61 HGLHSVLEEWFVEVLQNDL 79
>DICTYBASE|DDB_G0276377 [details] [associations]
symbol:anapc2 "anaphase promoting complex subunit 2"
species:44689 "Dictyostelium discoideum" [GO:0031625 "ubiquitin
protein ligase binding" evidence=IEA] [GO:0031461 "cullin-RING
ubiquitin ligase complex" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0003674 "molecular_function" evidence=ND] [GO:0031145
"anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=IC]
[GO:0016567 "protein ubiquitination" evidence=IEA;IC] [GO:0005829
"cytosol" evidence=ISS] [GO:0005680 "anaphase-promoting complex"
evidence=ISS] [GO:0005634 "nucleus" evidence=IEA;ISS] [GO:0051301
"cell division" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0007049 "cell cycle" evidence=IEA] InterPro:IPR001373
InterPro:IPR016158 Pfam:PF00888 PROSITE:PS01256 PROSITE:PS50069
UniPathway:UPA00143 dictyBase:DDB_G0276377 GO:GO:0005829
GO:GO:0051301 GO:GO:0007067 EMBL:AAFI02000014
GenomeReviews:CM000151_GR Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0016567 GO:GO:0005680 KO:K03349 GO:GO:0031145
InterPro:IPR014786 Pfam:PF08672 SMART:SM01013 SUPFAM:SSF75632
eggNOG:NOG306201 RefSeq:XP_643183.1 ProteinModelPortal:Q551S9
STRING:Q551S9 EnsemblProtists:DDB0234264 GeneID:8620454
KEGG:ddi:DDB_G0276377 OMA:NFIVISE ProtClustDB:CLSZ2729163
Uniprot:Q551S9
Length = 907
Score = 164 (62.8 bits), Expect = 2.1e-08, P = 2.1e-08
Identities = 67/287 (23%), Positives = 123/287 (42%)
Query: 219 GNEKLSDEAIEETLEKVVKLLAYISDK-DLFAEFYRKKLARRLLFDRSANDDHERSILTK 277
GN K ++ ++ + + L I D DLF YR L+ RLL + D E +
Sbjct: 545 GNAKANNNNKKKKKKDTISHLVNIYDGIDLFINEYRSMLSDRLLSVVDFDLDKEIKNIEL 604
Query: 278 LKQQCGGQFTSKMEGMVTD------LTLARENQTSFEEYLSNNQNAHPGI-DLSVTVLTT 330
LK + G E M+ D L L +N +NN N + + + +L+
Sbjct: 605 LKLRFGDSVLFNCEIMIKDMVDSKRLNLQIKNSQGVNNNNNNNNNNNNELKEFETLILSQ 664
Query: 331 GFWPSYKSSDLNLPSEMVKCVEVFKGFYETKTKHRKLTWIYSLGQCNINGKFEQKNIELI 390
FWP+ K + P + K ++++ YE R+L W LG +++ + NI+
Sbjct: 665 LFWPTLKGDEFKYPKSIEKKMQIYSKEYERIKTPRQLIWKQHLGLVDLDLEIGN-NIQSF 723
Query: 391 -VSTYQAATLLLFNTSDRLSYSEIMTQLNLTHDDLVRLLH-SLSCAKYKILLKEPNTKTI 448
VS A ++LF + D + + LT + L + L S K K++ N + I
Sbjct: 724 QVSPIHATLIMLFESDD----GDDDDEKELTLEYLSKQLEISKDLVKKKLIFWL-NNQII 778
Query: 449 SQSDH--FEFNSKFTDRMRRIKIPLPPVDERKKIVEDVDKDRRYAID 493
++ H ++ N+K + ++ + + D+ + +D D D ++
Sbjct: 779 KETSHETYKINNKEKEEQKQRQQQIENDDQDESSSDDDDDDNNIVVE 825
>FB|FBgn0002791 [details] [associations]
symbol:mr "morula" species:7227 "Drosophila melanogaster"
[GO:0000090 "mitotic anaphase" evidence=NAS] [GO:0005680
"anaphase-promoting complex" evidence=NAS;TAS;IPI] [GO:0051726
"regulation of cell cycle" evidence=TAS] [GO:0031625 "ubiquitin
protein ligase binding" evidence=IEA] [GO:0045886 "negative
regulation of synaptic growth at neuromuscular junction"
evidence=IMP] [GO:0050804 "regulation of synaptic transmission"
evidence=IMP] [GO:0090302 "mitotic anaphase-promoting complex
activity" evidence=ISS] [GO:0000151 "ubiquitin ligase complex"
evidence=IPI] [GO:0031145 "anaphase-promoting complex-dependent
proteasomal ubiquitin-dependent protein catabolic process"
evidence=ISS] InterPro:IPR001373 InterPro:IPR016158 Pfam:PF00888
PROSITE:PS50069 SMART:SM00182 EMBL:AE013599 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0051726 GO:GO:0045886 GO:GO:0006511
GO:GO:0005680 KO:K03349 OMA:MLRGVLF InterPro:IPR014786 Pfam:PF08672
SMART:SM01013 SUPFAM:SSF75632 GeneTree:ENSGT00390000016127
GO:GO:0050804 FlyBase:FBgn0002791 EMBL:AY129297 EMBL:BT031326
RefSeq:NP_611862.1 UniGene:Dm.759 SMR:Q9W1E5 IntAct:Q9W1E5
MINT:MINT-292405 STRING:Q9W1E5 EnsemblMetazoa:FBtr0072156
GeneID:45906 KEGG:dme:Dmel_CG3060 UCSC:CG3060-RA InParanoid:Q9W1E5
GenomeRNAi:45906 NextBio:838467 Uniprot:Q9W1E5
Length = 802
Score = 162 (62.1 bits), Expect = 3.0e-08, P = 3.0e-08
Identities = 45/180 (25%), Positives = 78/180 (43%)
Query: 235 VVKLLAYI-SDKDLFAEFYRKKLARRLLFDRSANDDHERSILTKLKQQCGGQFTSKMEGM 293
++ ++ I K+LF YR +A RLL N + E L LK + G E M
Sbjct: 486 IISMVVDIYGSKELFMTEYRNLMADRLLAQLDFNSEKEIRNLELLKIRFGESLLHSCEVM 545
Query: 294 VTDLTLARENQTSFEEYLSNNQNAHPGIDLSVTVLTTGFWPSYKSSDLNLPSEMVKCVEV 353
+ D+T ++ +N D+S +++ FWPS+ L LP E+ +
Sbjct: 546 LKDVTDSKRINAHIHSDGDRTENQL--FDISSLIVSAQFWPSFNKESLQLPEEIENEFKK 603
Query: 354 FKGFYETKTKHRKLTWIYSLGQCNINGKFEQKNIELIVSTYQAATLLLFNTSDRLSYSEI 413
+ YE +R L W G+ NI + + +E++VS A + F T + + ++
Sbjct: 604 YTKAYEAYKGNRTLNWRTVTGRVNIEIEIGDRTMEMVVSPILAVIIYHFQTKNEWTIEDL 663
>UNIPROTKB|Q9UJX6 [details] [associations]
symbol:ANAPC2 "Anaphase-promoting complex subunit 2"
species:9606 "Homo sapiens" [GO:0031625 "ubiquitin protein ligase
binding" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0007399 "nervous system development" evidence=IEA] [GO:0030154
"cell differentiation" evidence=IEA] [GO:0051301 "cell division"
evidence=IEA] [GO:0070979 "protein K11-linked ubiquitination"
evidence=IDA] [GO:0005680 "anaphase-promoting complex"
evidence=IDA] [GO:0090129 "positive regulation of synapse
maturation" evidence=ISS] [GO:0031915 "positive regulation of
synaptic plasticity" evidence=ISS] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=TAS] [GO:0000079 "regulation of
cyclin-dependent protein serine/threonine kinase activity"
evidence=TAS] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=TAS] [GO:0008054 "cyclin catabolic process" evidence=TAS]
[GO:0000075 "cell cycle checkpoint" evidence=TAS] [GO:0000278
"mitotic cell cycle" evidence=TAS] [GO:0005654 "nucleoplasm"
evidence=TAS] [GO:0005829 "cytosol" evidence=TAS] [GO:0007094
"mitotic spindle assembly checkpoint" evidence=TAS] [GO:0031145
"anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0051436 "negative regulation of ubiquitin-protein ligase
activity involved in mitotic cell cycle" evidence=TAS] [GO:0051437
"positive regulation of ubiquitin-protein ligase activity involved
in mitotic cell cycle" evidence=TAS] [GO:0051439 "regulation of
ubiquitin-protein ligase activity involved in mitotic cell cycle"
evidence=TAS] Reactome:REACT_6850 InterPro:IPR001373
InterPro:IPR016158 Pfam:PF00888 PROSITE:PS01256 PROSITE:PS50069
SMART:SM00182 UniPathway:UPA00143 GO:GO:0005829 Reactome:REACT_6900
Reactome:REACT_115566 GO:GO:0000079 GO:GO:0005654
Reactome:REACT_21300 GO:GO:0051301 GO:GO:0007067 GO:GO:0007094
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0050775 GO:GO:0051436
GO:GO:0045773 GO:GO:0004842 GO:GO:0005680 EMBL:AF191337
EMBL:AL929554 EMBL:BC032503 EMBL:BC001579 EMBL:BC009487
EMBL:AB037827 IPI:IPI00002549 IPI:IPI00375832 RefSeq:NP_037498.1
UniGene:Hs.533262 ProteinModelPortal:Q9UJX6 SMR:Q9UJX6
DIP:DIP-32957N IntAct:Q9UJX6 MINT:MINT-1196367 STRING:Q9UJX6
PhosphoSite:Q9UJX6 DMDM:37537863 PaxDb:Q9UJX6 PRIDE:Q9UJX6
DNASU:29882 Ensembl:ENST00000323927 GeneID:29882 KEGG:hsa:29882
UCSC:uc004clq.1 UCSC:uc004clr.1 CTD:29882 GeneCards:GC09M140069
HGNC:HGNC:19989 HPA:CAB018692 MIM:606946 neXtProt:NX_Q9UJX6
PharmGKB:PA134884359 eggNOG:COG5647 HOGENOM:HOG000033936
HOVERGEN:HBG045327 InParanoid:Q9UJX6 KO:K03349 OMA:MLRGVLF
OrthoDB:EOG4T1HM4 PhylomeDB:Q9UJX6 Reactome:REACT_8017
GenomeRNAi:29882 NextBio:52411 ArrayExpress:Q9UJX6 Bgee:Q9UJX6
CleanEx:HS_ANAPC2 CleanEx:HS_APC2 Genevestigator:Q9UJX6
GermOnline:ENSG00000176248 GO:GO:0031145 GO:GO:0008054
GO:GO:0090129 GO:GO:0031915 GO:GO:0051437 GO:GO:0070979
InterPro:IPR014786 Pfam:PF08672 SMART:SM01013 SUPFAM:SSF75632
Uniprot:Q9UJX6
Length = 822
Score = 169 (64.5 bits), Expect = 3.5e-08, Sum P(3) = 3.5e-08
Identities = 50/179 (27%), Positives = 82/179 (45%)
Query: 235 VVKLLAYI-SDKDLFAEFYRKKLARRLLFDRSANDDHERSILTKLKQQCGGQFTSKMEGM 293
++ LL I KDLF YR LA RLL S + + E + LK + G E M
Sbjct: 501 IISLLVSIYGSKDLFINEYRSLLADRLLHQFSFSPEREIRNVELLKLRFGEAPMHFCEVM 560
Query: 294 VTDLTLARE-NQTSFEEYLSNNQNAHPGIDLSVTVLTTGFWPSYKSSDLNLPSEMVKCVE 352
+ D+ +R N EE P + +L++ FWP +K L +P ++ +E
Sbjct: 561 LKDMADSRRINANIREEDEKRPAEEQPPFGVYAVILSSEFWPPFKDEKLEVPEDIRAALE 620
Query: 353 VFKGFYETKTKHRKLTWIYSLGQCNINGKFEQKNIELIVSTYQAATLLLFNTSDRLSYS 411
+ YE R L+W ++LG ++ + + + + V+ QA LL F D+ S++
Sbjct: 621 AYCKKYEQLKAMRTLSWKHTLGLVTMDVELADRTLSVAVTPVQAVILLYFQ--DQASWT 677
Score = 43 (20.2 bits), Expect = 3.5e-08, Sum P(3) = 3.5e-08
Identities = 13/49 (26%), Positives = 24/49 (48%)
Query: 505 VLGHQQLVSECVEQLSRMFKPDIKAIKKRMEDLITRDYLERDKENPNMF 553
+L Q S +E+LS+ K + +++RM + + L +E P F
Sbjct: 667 LLYFQDQASWTLEELSKAVKMPVALLRRRMSVWLQQGVLR--EEPPGTF 713
Score = 38 (18.4 bits), Expect = 3.5e-08, Sum P(3) = 3.5e-08
Identities = 9/19 (47%), Positives = 12/19 (63%)
Query: 56 HYLHSSSEPKLVEKVQHEL 74
H LHS E VE +Q++L
Sbjct: 65 HGLHSVLEEWFVEVLQNDL 83
>ZFIN|ZDB-GENE-081104-256 [details] [associations]
symbol:anapc2 "anaphase promoting complex subunit
2" species:7955 "Danio rerio" [GO:0031625 "ubiquitin protein ligase
binding" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0031461 "cullin-RING ubiquitin
ligase complex" evidence=IEA] InterPro:IPR001373 InterPro:IPR016158
Pfam:PF00888 PROSITE:PS50069 ZFIN:ZDB-GENE-081104-256
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006511 CTD:29882
eggNOG:COG5647 HOGENOM:HOG000033936 HOVERGEN:HBG045327 KO:K03349
OrthoDB:EOG4T1HM4 InterPro:IPR014786 Pfam:PF08672 SMART:SM01013
SUPFAM:SSF75632 GeneTree:ENSGT00390000016127 GO:GO:0031461
EMBL:CU468929 IPI:IPI00920305 RefSeq:NP_001243675.1
UniGene:Dr.105374 Ensembl:ENSDART00000133722 GeneID:100318335
KEGG:dre:100318335 Uniprot:B8JLK0
Length = 802
Score = 166 (63.5 bits), Expect = 6.0e-08, Sum P(2) = 6.0e-08
Identities = 53/195 (27%), Positives = 85/195 (43%)
Query: 235 VVKLLAYI-SDKDLFAEFYRKKLARRLLFDRSANDDHERSILTKLKQQCGGQFTSKMEGM 293
++ LL I K++F Y+ LA RLL + N E + LK + G E M
Sbjct: 478 IISLLVSIYGSKEIFVNEYKTVLADRLLHQLNYNTAREIRNVELLKLRFGESHMHYCEVM 537
Query: 294 VTDLTLARE-NQTSFEEYLSNNQNAHPGIDLSVTVLTTGFWPSYKSSDLNLPSEMVKCVE 352
+ D+ +R N EE P + LS ++++ FWP K + LP+ K +E
Sbjct: 538 LKDVADSRRINSNIHEEERRLPAEEQPTLPLSAMIISSEFWPQLKEEKMELPAVASKAME 597
Query: 353 VFKGFYETKTKHRKLTWIYSLGQCNINGKFEQKNI-ELIVSTYQAATLLLFNTSDRLSYS 411
+ +E R L W LG ++ + E + I +L VS AA +L F +
Sbjct: 598 DYTHRFEKLKAMRTLRWKPQLGSVTLDLELEDRTITDLTVSPIHAAIILHFQDKGTWTLE 657
Query: 412 EIMTQLNLTHDDLVR 426
E+ L + + +VR
Sbjct: 658 ELSGVLGVPQE-MVR 671
Score = 40 (19.1 bits), Expect = 6.0e-08, Sum P(2) = 6.0e-08
Identities = 18/84 (21%), Positives = 34/84 (40%)
Query: 4 MDSYEKDFEEHMLQDTGAYYSRKASNWILEDS-CPEYMIKAEECLKKER-DRVSHYLHSS 61
++ Y + F HM Q A + + + E C C +E ++ H
Sbjct: 157 LEFYSRTFSVHMSQAGEAVEAEEGAVDTDEGGLCSGCATLPHLCWCQEALQQLQELSHIL 216
Query: 62 SEPKLVEKVQHELLVVYATELLEK 85
S +L+E+V E + +L+E+
Sbjct: 217 SRLQLLERVSSEAVTSILHQLIEQ 240
Score = 38 (18.4 bits), Expect = 9.7e-08, Sum P(2) = 9.7e-08
Identities = 11/34 (32%), Positives = 19/34 (55%)
Query: 116 LEPVANVFKQHITAEGTVLVQQAEDAA--TNQGG 147
LE + F H++ G + +AE+ A T++GG
Sbjct: 157 LEFYSRTFSVHMSQAGEAV--EAEEGAVDTDEGG 188
>UNIPROTKB|H7C399 [details] [associations]
symbol:CUL3 "Cullin-3" species:9606 "Homo sapiens"
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0031461 "cullin-RING ubiquitin ligase complex"
evidence=IEA] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] InterPro:IPR001373 InterPro:IPR016157
InterPro:IPR016158 InterPro:IPR019559 Pfam:PF00888 Pfam:PF10557
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00884 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0006511 SUPFAM:SSF75632 GO:GO:0031461
EMBL:AC073052 EMBL:AC092679 HGNC:HGNC:2553 ChiTaRS:CUL3
ProteinModelPortal:H7C399 SMR:H7C399 Ensembl:ENST00000451538
Uniprot:H7C399
Length = 111
Score = 89 (36.4 bits), Expect = 7.9e-08, Sum P(2) = 7.9e-08
Identities = 19/44 (43%), Positives = 26/44 (59%)
Query: 514 ECVEQLSRMFKPDIKAIKKRMEDLITRDYLERDKENPNMFRYLA 557
E +QL F P IKKR+E LI R+YL R E+ ++ Y+A
Sbjct: 68 EVTQQLKARFLPSPVVIKKRIEGLIEREYLARTPEDRKVYTYVA 111
Score = 66 (28.3 bits), Expect = 7.9e-08, Sum P(2) = 7.9e-08
Identities = 16/45 (35%), Positives = 27/45 (60%)
Query: 373 LGQCNINGKFEQKNIELIVSTYQAATLLLFNTSDRLSYSEIMTQL 417
+G + G +K+I L VST+Q L+LFN ++ ++ E+ QL
Sbjct: 31 VGGAQVTGSNTRKHI-LQVSTFQMTILMLFNNREKYTF-EVTQQL 73
>TAIR|locus:2049173 [details] [associations]
symbol:APC2 "AT2G04660" species:3702 "Arabidopsis
thaliana" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISS] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA;TAS] [GO:0031461 "cullin-RING ubiquitin
ligase complex" evidence=IEA] [GO:0031625 "ubiquitin protein ligase
binding" evidence=IEA] [GO:0000151 "ubiquitin ligase complex"
evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005819 "spindle"
evidence=IDA] [GO:0009561 "megagametogenesis" evidence=IMP]
[GO:0007267 "cell-cell signaling" evidence=RCA] [GO:0007276 "gamete
generation" evidence=RCA] [GO:0009616 "virus induced gene
silencing" evidence=RCA] [GO:0010267 "production of ta-siRNAs
involved in RNA interference" evidence=RCA] [GO:0032875 "regulation
of DNA endoreduplication" evidence=RCA] [GO:0035196 "production of
miRNAs involved in gene silencing by miRNA" evidence=RCA]
[GO:0051302 "regulation of cell division" evidence=RCA] [GO:0051510
"regulation of unidimensional cell growth" evidence=RCA]
InterPro:IPR001373 InterPro:IPR016158 Pfam:PF00888 PROSITE:PS01256
PROSITE:PS50069 UniPathway:UPA00143 GO:GO:0005634 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0051301 GO:GO:0007067 GO:GO:0005819
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0016567 GO:GO:0006511
GO:GO:0009561 eggNOG:COG5647 KO:K03349 InterPro:IPR014786
Pfam:PF08672 SMART:SM01013 SUPFAM:SSF75632 EMBL:AC006955
EMBL:AK118453 EMBL:AY138228 IPI:IPI00520644 PIR:H84459
RefSeq:NP_178543.2 UniGene:At.41283 ProteinModelPortal:Q8H1U5
SMR:Q8H1U5 IntAct:Q8H1U5 STRING:Q8H1U5 PaxDb:Q8H1U5 PRIDE:Q8H1U5
EnsemblPlants:AT2G04660.1 GeneID:815008 KEGG:ath:AT2G04660
TAIR:At2g04660 HOGENOM:HOG000265303 InParanoid:Q8H1U5 OMA:RIHNTLK
PhylomeDB:Q8H1U5 ProtClustDB:CLSN2690638 Genevestigator:Q8H1U5
GO:GO:0031461 Uniprot:Q8H1U5
Length = 865
Score = 165 (63.1 bits), Expect = 9.5e-08, Sum P(2) = 9.5e-08
Identities = 51/194 (26%), Positives = 86/194 (44%)
Query: 238 LLAYISDKDLFAEFYRKKLARRLLFDRSANDDHERSILTKLKQQCGGQFTSKMEGMVTDL 297
L+ I K+ YR LA +LL + D E + LK G + E M+ DL
Sbjct: 543 LVDIIGSKEQLVNEYRVMLAEKLLNKTDYDIDTEIRTVELLKIHFGEASMQRCEIMLNDL 602
Query: 298 TLARENQTSFEEYLSNNQNAHPG---ID-LSVTVLTTGFWPSYKSSDLNLPSEMVKCVEV 353
++ T+ ++ +D L+ T+L+T FWP + L LP + K +
Sbjct: 603 IDSKRVNTNIKKASQTGAELRENELSVDTLTSTILSTNFWPPIQDEPLELPGPVDKLLSD 662
Query: 354 FKG-FYETKTKHRKLTWIYSLGQCNINGKFEQKNIELIVSTYQAATLLLFNTSDRLSYSE 412
+ ++E KT RKL W +LG + +FE + ++ VS AA ++ F +Y +
Sbjct: 663 YANRYHEIKTP-RKLLWKKNLGTVKLELQFEDRAMQFTVSPTHAAIIMQFQEKKSWTYKD 721
Query: 413 IMTQLNLTHDDLVR 426
+ + + D L R
Sbjct: 722 LAEVIGIPIDALNR 735
Score = 40 (19.1 bits), Expect = 9.5e-08, Sum P(2) = 9.5e-08
Identities = 12/39 (30%), Positives = 19/39 (48%)
Query: 65 KLVEKVQHELLVVYATELLEKEQSGCRALLREDKVEDLS 103
K + KV +L + T + E + LL + KV DL+
Sbjct: 241 KNIGKVVRDLRSIGFTSMAENAYASAIFLLLKAKVHDLA 279
Score = 38 (18.4 bits), Expect = 1.5e-07, Sum P(2) = 1.5e-07
Identities = 8/13 (61%), Positives = 10/13 (76%)
Query: 221 EKLSDEAIEETLE 233
E LSD+AI+E E
Sbjct: 15 ETLSDDAIQEITE 27
>UNIPROTKB|I3L5Y8 [details] [associations]
symbol:I3L5Y8 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0031461 "cullin-RING ubiquitin ligase complex"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] InterPro:IPR001373 Pfam:PF00888
GO:GO:0006511 GO:GO:0031461 InterPro:IPR016159 SUPFAM:SSF74788
GeneTree:ENSGT00550000074299 OMA:DECMLRE Ensembl:ENSSSCT00000029748
Uniprot:I3L5Y8
Length = 225
Score = 139 (54.0 bits), Expect = 5.5e-07, P = 5.5e-07
Identities = 29/94 (30%), Positives = 53/94 (56%)
Query: 7 YEKDFEEHMLQDTGAYYSRKASNWILEDSCPEYMIKAEECLKKERDRVSHYLHSSSEPKL 66
YE+DFE L+ + ++ ++ ++ E+S Y+ K E + +E +RV H L S+E +
Sbjct: 129 YEEDFEAPFLEMSAEFFQMESQKFLAENSASVYIKKVEARINEEIERVMHCLDKSTEEPI 188
Query: 67 VEKVQHELLVVYATELLEKEQSGCRALLREDKVE 100
V+ V+ EL+ + ++E E SG +L+ K E
Sbjct: 189 VKVVERELISKHMKTIVEMENSGLVHMLKNGKTE 222
>WB|WBGene00000143 [details] [associations]
symbol:apc-2 species:6239 "Caenorhabditis elegans"
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0031461 "cullin-RING ubiquitin ligase complex"
evidence=IEA] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0000003 "reproduction"
evidence=IMP] [GO:0007126 "meiosis" evidence=IMP] [GO:0040035
"hermaphrodite genitalia development" evidence=IMP] [GO:0040039
"inductive cell migration" evidence=IMP] [GO:0006898
"receptor-mediated endocytosis" evidence=IMP] InterPro:IPR001373
InterPro:IPR016158 Pfam:PF00888 PROSITE:PS01256 PROSITE:PS50069
SMART:SM00182 GO:GO:0009792 GO:GO:0007126 GO:GO:0006898
GO:GO:0051301 GO:GO:0007067 GO:GO:0040035 GO:GO:0040039
GO:GO:0006511 KO:K03349 InterPro:IPR014786 SMART:SM01013
SUPFAM:SSF75632 GeneTree:ENSGT00390000016127 GO:GO:0031461
EMBL:FO080533 PIR:S44845 PIR:S44846 RefSeq:NP_498762.2
ProteinModelPortal:P34514 SMR:P34514 IntAct:P34514
MINT:MINT-1054240 STRING:P34514 PaxDb:P34514 EnsemblMetazoa:K06H7.6
GeneID:176139 KEGG:cel:CELE_K06H7.6 UCSC:K06H7.6 CTD:176139
WormBase:K06H7.6 eggNOG:NOG306201 HOGENOM:HOG000022396
InParanoid:P34514 OMA:HEINAEL NextBio:891294 Uniprot:P34514
Length = 731
Score = 145 (56.1 bits), Expect = 1.8e-06, P = 1.8e-06
Identities = 38/187 (20%), Positives = 88/187 (47%)
Query: 238 LLAYISDKDLFAEFYRKKLARRLLFDRSANDDHERSILTKLKQQCGGQFTSKMEGMVTDL 297
L++ K+LF + YR LA RL + + + E+ L LK + E M+ D+
Sbjct: 405 LVSVYGSKELFVKEYRNLLAERLSSSDNKDPEFEKRYLDLLKLRFQYSELQHCEVMLRDV 464
Query: 298 TLARENQTSFEEYLSNNQNAH--PGIDLSVTVLTTGFWPSYKS--SDLNLPSEMVKCVEV 353
+ + FE+ + + P I +S ++++ +WP ++ ++ +P + ++V
Sbjct: 465 IHSLDIDKKFEDMSERSAGNYDVPIIPISACIISSHYWPKLETEKTEALMPQPLQAAMDV 524
Query: 354 FKGFYETKTKHRKLTWIYSLGQCNINGKFEQKNIELIVSTYQAATLLLFNTSDRLSYSEI 413
++ Y + RKL W+ S+G ++ + ++ + A L LF + + +E+
Sbjct: 525 YQETYLDVKRDRKLEWLRSVGCVEVSINIDGVEVDRTIPNMYALLLFLFLEKETWTTAEV 584
Query: 414 MTQLNLT 420
+ ++ ++
Sbjct: 585 VEKMGMS 591
>UNIPROTKB|P34514 [details] [associations]
symbol:apc-2 "Anaphase-promoting complex subunit 2"
species:6239 "Caenorhabditis elegans" [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR001373 InterPro:IPR016158 Pfam:PF00888
PROSITE:PS01256 PROSITE:PS50069 SMART:SM00182 GO:GO:0009792
GO:GO:0007126 GO:GO:0006898 GO:GO:0051301 GO:GO:0007067
GO:GO:0040035 GO:GO:0040039 GO:GO:0006511 KO:K03349
InterPro:IPR014786 SMART:SM01013 SUPFAM:SSF75632
GeneTree:ENSGT00390000016127 GO:GO:0031461 EMBL:FO080533 PIR:S44845
PIR:S44846 RefSeq:NP_498762.2 ProteinModelPortal:P34514 SMR:P34514
IntAct:P34514 MINT:MINT-1054240 STRING:P34514 PaxDb:P34514
EnsemblMetazoa:K06H7.6 GeneID:176139 KEGG:cel:CELE_K06H7.6
UCSC:K06H7.6 CTD:176139 WormBase:K06H7.6 eggNOG:NOG306201
HOGENOM:HOG000022396 InParanoid:P34514 OMA:HEINAEL NextBio:891294
Uniprot:P34514
Length = 731
Score = 145 (56.1 bits), Expect = 1.8e-06, P = 1.8e-06
Identities = 38/187 (20%), Positives = 88/187 (47%)
Query: 238 LLAYISDKDLFAEFYRKKLARRLLFDRSANDDHERSILTKLKQQCGGQFTSKMEGMVTDL 297
L++ K+LF + YR LA RL + + + E+ L LK + E M+ D+
Sbjct: 405 LVSVYGSKELFVKEYRNLLAERLSSSDNKDPEFEKRYLDLLKLRFQYSELQHCEVMLRDV 464
Query: 298 TLARENQTSFEEYLSNNQNAH--PGIDLSVTVLTTGFWPSYKS--SDLNLPSEMVKCVEV 353
+ + FE+ + + P I +S ++++ +WP ++ ++ +P + ++V
Sbjct: 465 IHSLDIDKKFEDMSERSAGNYDVPIIPISACIISSHYWPKLETEKTEALMPQPLQAAMDV 524
Query: 354 FKGFYETKTKHRKLTWIYSLGQCNINGKFEQKNIELIVSTYQAATLLLFNTSDRLSYSEI 413
++ Y + RKL W+ S+G ++ + ++ + A L LF + + +E+
Sbjct: 525 YQETYLDVKRDRKLEWLRSVGCVEVSINIDGVEVDRTIPNMYALLLFLFLEKETWTTAEV 584
Query: 414 MTQLNLT 420
+ ++ ++
Sbjct: 585 VEKMGMS 591
>POMBASE|SPBP23A10.04 [details] [associations]
symbol:apc2 "anaphase-promoting complex cullin family
subunit Apc2" species:4896 "Schizosaccharomyces pombe" [GO:0005515
"protein binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005680 "anaphase-promoting complex" evidence=IDA] [GO:0005829
"cytosol" evidence=IDA] [GO:0008054 "cyclin catabolic process"
evidence=IC] [GO:0016567 "protein ubiquitination" evidence=IC]
[GO:0030071 "regulation of mitotic metaphase/anaphase transition"
evidence=IC] [GO:0031145 "anaphase-promoting complex-dependent
proteasomal ubiquitin-dependent protein catabolic process"
evidence=IC] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IC] InterPro:IPR001373 InterPro:IPR016158 Pfam:PF00888
PROSITE:PS01256 PROSITE:PS50069 PomBase:SPBP23A10.04 GO:GO:0005829
GO:GO:0051301 GO:GO:0007067 GO:GO:0030071 EMBL:CU329671
Gene3D:1.10.10.10 InterPro:IPR011991 GenomeReviews:CU329671_GR
GO:GO:0016567 GO:GO:0005680 KO:K03349 GO:GO:0031145 GO:GO:0008054
InterPro:IPR014786 Pfam:PF08672 SMART:SM01013 SUPFAM:SSF75632
eggNOG:NOG306201 RefSeq:NP_001018806.1 ProteinModelPortal:Q874R3
IntAct:Q874R3 STRING:Q874R3 EnsemblFungi:SPBP23A10.04.1
GeneID:3361204 KEGG:spo:SPBP23A10.04 OMA:SHWANFR OrthoDB:EOG4XPTQ5
NextBio:20811314 Uniprot:Q874R3
Length = 681
Score = 121 (47.7 bits), Expect = 0.00067, P = 0.00067
Identities = 42/176 (23%), Positives = 77/176 (43%)
Query: 235 VVKLLAYISDKDLFAEFYRKKLARRLLFDRSANDDHERSILTKLKQQCGGQFTSKMEGMV 294
V L++ K+ + + LA RLL + + E + LK + G M+
Sbjct: 376 VGSLISIFKSKEPLVKELQLLLADRLLQLTDYHYEVEAKNIEFLKYRFGETVLQMCSVML 435
Query: 295 TDLTLAR--ENQTSFEEYLSNNQNAHPGIDLSVTVLTTGFWPSYKSSDLNLPSEMVKCVE 352
D+ +R + E Y+S L VT+L+ FWP+ +LP + K ++
Sbjct: 436 NDIENSRFIDQSIHMENYVSKG--------LHVTILSRLFWPTLSVRYFHLPGPLKKELD 487
Query: 353 VFKGFYETKTKHRKLTWIYSLGQCNINGKFEQKNIELIVSTYQAATLLLFNTSDRL 408
+ Y + + R+L ++ +LG + + E + + L V+ QAA + LF + L
Sbjct: 488 AYAEEYRERKRKRELVFLPNLGSVELEIELEDRTLTLTVTPEQAAFISLFEETSTL 543
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.318 0.133 0.377 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 557 557 0.00098 119 3 11 22 0.40 34
35 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 121
No. of states in DFA: 609 (65 KB)
Total size of DFA: 309 KB (2159 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 54.61u 0.09s 54.70t Elapsed: 00:00:36
Total cpu time: 54.67u 0.09s 54.76t Elapsed: 00:00:36
Start: Fri May 10 15:01:20 2013 End: Fri May 10 15:01:56 2013
WARNINGS ISSUED: 1