Query 008712
Match_columns 557
No_of_seqs 164 out of 1522
Neff 8.4
Searched_HMMs 29240
Date Mon Mar 25 09:58:25 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/008712.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/008712hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3ko1_A Chaperonin; 9-fold symm 100.0 7E-115 3E-119 940.3 51.0 526 2-531 13-538 (553)
2 1a6d_B Thermosome (beta subuni 100.0 8E-114 3E-118 933.3 53.9 524 2-530 4-527 (543)
3 1q3q_A Thermosome alpha subuni 100.0 1E-113 4E-118 931.9 55.1 525 1-530 5-529 (548)
4 3ruv_A Chaperonin, CPN; double 100.0 3E-113 9E-118 928.5 57.1 520 3-531 4-524 (543)
5 3iyg_A T-complex protein 1 sub 100.0 1E-112 5E-117 921.2 60.9 512 12-526 3-528 (529)
6 3iyg_G T-complex protein 1 sub 100.0 1E-112 4E-117 918.7 60.2 514 11-526 1-514 (515)
7 3p9d_G T-complex protein 1 sub 100.0 4E-114 1E-118 934.8 44.0 525 1-534 6-535 (550)
8 1a6d_A Thermosome (alpha subun 100.0 2E-112 5E-117 922.9 52.5 519 4-529 7-525 (545)
9 3p9d_A T-complex protein 1 sub 100.0 2E-112 7E-117 923.4 52.7 527 6-535 11-557 (559)
10 3iyg_H T-complex protein 1 sub 100.0 2E-111 7E-116 908.3 59.7 508 9-526 1-514 (515)
11 3iyg_B T-complex protein 1 sub 100.0 5E-111 2E-115 905.5 60.0 505 11-527 2-512 (513)
12 3p9d_C T-complex protein 1 sub 100.0 6E-113 2E-117 926.9 44.0 526 1-528 1-588 (590)
13 3iyg_D T-complex protein 1 sub 100.0 5E-110 2E-114 899.0 57.7 507 12-525 4-517 (518)
14 3iyg_E T-complex protein 1 sub 100.0 2E-109 6E-114 894.9 60.7 508 12-525 3-514 (515)
15 3iyg_Z T-complex protein 1 sub 100.0 1E-109 5E-114 894.5 56.0 503 13-525 4-516 (517)
16 3p9d_D T-complex protein 1 sub 100.0 3E-111 1E-115 909.1 42.4 519 1-525 1-527 (528)
17 3p9d_E T-complex protein 1 sub 100.0 5E-110 2E-114 905.4 50.6 521 3-529 27-561 (562)
18 3p9d_H T-complex protein 1 sub 100.0 2E-110 7E-115 909.3 39.4 519 5-529 11-551 (568)
19 3p9d_B T-complex protein 1 sub 100.0 3E-110 1E-114 903.6 37.4 517 4-532 2-524 (527)
20 3iyg_Q T-complex protein 1 sub 100.0 2E-107 9E-112 877.7 59.7 505 10-525 1-511 (512)
21 3p9d_F T-complex protein 1 sub 100.0 1E-109 4E-114 901.8 40.0 518 4-528 2-539 (546)
22 3aq1_B Thermosome subunit; gro 100.0 5E-103 2E-107 841.3 41.7 480 47-530 1-480 (500)
23 1we3_A CPN60(groel); chaperoni 100.0 1.3E-94 4.5E-99 779.5 43.3 463 13-529 4-528 (543)
24 1kp8_A Groel protein; chaperon 100.0 1E-94 3.5E-99 779.1 40.6 462 13-530 4-527 (547)
25 1iok_A Chaperonin 60; chaperon 100.0 2E-95 7E-100 785.3 30.3 464 13-531 5-530 (545)
26 3rtk_A 60 kDa chaperonin 2; he 100.0 2.8E-94 9.7E-99 773.3 32.5 461 13-530 4-525 (546)
27 1gml_A T-complex protein 1 sub 100.0 2.4E-36 8.2E-41 279.8 18.9 174 208-382 1-174 (178)
28 1ass_A Thermosome; chaperonin, 100.0 5.8E-32 2E-36 245.3 13.6 154 214-369 1-154 (159)
29 3m6c_A 60 kDa chaperonin 1; ch 99.3 3.1E-12 1.1E-16 115.8 8.8 146 211-397 2-170 (194)
30 3osx_A 60 kDa chaperonin; alph 99.3 1.9E-11 6.4E-16 110.9 10.1 142 215-397 13-177 (201)
31 1srv_A Protein (groel (HSP60 c 99.2 1.1E-11 3.8E-16 106.9 6.9 113 216-353 1-135 (145)
32 1o13_A Probable NIFB protein; 54.5 31 0.0011 29.1 6.9 52 278-330 68-119 (136)
33 2yx6_A Hypothetical protein PH 53.2 35 0.0012 28.0 6.9 52 278-330 55-106 (121)
34 1eo1_A Hypothetical protein MT 50.3 40 0.0014 27.7 6.8 52 278-330 57-108 (124)
35 2wfb_A Putative uncharacterize 47.3 39 0.0013 27.6 6.3 51 278-329 59-110 (120)
36 2re2_A Uncharacterized protein 38.1 68 0.0023 26.9 6.5 51 278-330 71-121 (136)
37 1rdu_A Conserved hypothetical 35.2 41 0.0014 27.3 4.4 51 279-330 55-105 (116)
38 2qtd_A Uncharacterized protein 26.9 1.5E+02 0.0052 23.2 6.5 48 280-329 50-97 (105)
39 2lbw_A H/ACA ribonucleoprotein 25.6 1.7E+02 0.0059 23.9 6.7 50 277-329 27-81 (121)
40 2xzm_U Ribosomal protein L7AE 25.5 1.6E+02 0.0056 24.3 6.6 50 277-329 31-85 (126)
41 3v7q_A Probable ribosomal prot 25.3 1.8E+02 0.0063 22.8 6.6 51 277-330 26-80 (101)
42 3v7e_A Ribosome-associated pro 23.8 1.5E+02 0.0052 22.3 5.6 49 278-329 19-71 (82)
43 3psh_A Protein HI_1472; substr 22.7 1.4E+02 0.0047 28.8 6.5 50 280-329 78-153 (326)
44 3on1_A BH2414 protein; structu 22.5 2E+02 0.0068 22.5 6.3 50 277-329 25-78 (101)
45 2pw9_A Putative formate dehydr 22.1 83 0.0028 29.9 4.5 40 278-317 207-246 (268)
No 1
>3ko1_A Chaperonin; 9-fold symmetry, double ring, ATP hydrolase, chaperone, NUCL binding; HET: ADP; 3.70A {Acidianus tengchongensis}
Probab=100.00 E-value=7.3e-115 Score=940.34 Aligned_cols=526 Identities=35% Similarity=0.584 Sum_probs=489.4
Q ss_pred CCCcccccccccccccHHHHHHHHHHHHHHHHHhhhcCCCCCCceeeecCCCCEEEeccHHHHhhcccccChHHHHHHHH
Q 008712 2 HSPVLVLKDSLKRESGTKVHHANIQASKAVADIIRTTLGPRSMLKMLLDASGGIVVTNDGNAILRELDVAHPAAKSMIEL 81 (557)
Q Consensus 2 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~l~~~v~sslGP~G~~k~i~~~~g~~~iTnDG~tIlk~l~~~hP~a~ll~~~ 81 (557)
++|+.+++++.+..+|.++|.+|+.||+.|+++||+||||+||+|||+++.|+++|||||+||||+|+++||+|+|++++
T Consensus 13 ~~~~~~l~~~~~~~~g~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~G~~~iTnDG~tIlk~i~v~hP~Akll~e~ 92 (553)
T 3ko1_A 13 GIPVIILKEGSSRTYGKEAVRANIAAVKAVEEALKSTYGPRGMDKMLVDSLGDITITNDGATILDKMDLQHPAAKLLVQI 92 (553)
T ss_dssp ---------------CHHHHHHHHHHHHHHHHHHGGGCSTTCCEEEEECTTSCEEEECCHHHHHHSSCCCSHHHHHHHHH
T ss_pred CCeEEEEecCcccchhHHHHHHHHHHHHHHHHHHHhccCCcchhhHHHhhccceEEecCccchhhhhhccChhHHHHHHH
Confidence 46888899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhhccccCChhHHHHHHHHHHHHHHHHHhcCCChhhHHHHHHHHHHHHHHHHhhcccccCCCCHHHHHHHHHHHhhcc
Q 008712 82 SRTQDEEVGDGTTSVIVLAGEMLHVAEEFIDKNYHPTVICRAYNKALEDAVAVLDKIAMPIDTNDRATMLGLVKSCIGTK 161 (557)
Q Consensus 82 ~~~~~~~~GDGttt~viLa~~Ll~~~~~li~~gi~p~~I~~g~~~a~~~~~~~L~~~s~~v~~~~~~~l~~ia~t~l~sK 161 (557)
|++|++++||||||++||+++||+++.+++++|+||..|++||++|++.++++|++++++++..+++.|.++|+|+++||
T Consensus 93 a~~qd~e~GDGTTtvvVLA~eLL~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~d~e~L~~vA~tsl~sK 172 (553)
T 3ko1_A 93 AKGQDEETADGTKTAVIFSGELVKKAEDLLYKDVHPTIIISGYKKAEEVALQTIQELAQTVSINDTDLLRKIAMTSLSSK 172 (553)
T ss_dssp HHTCSSSSSTTHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTCEECCTTCHHHHHHHHHHHHTTS
T ss_pred hhCCcccccCCceeEEEehHHHHHhHHHHHhcCCCceEEehhhhHHHHHHHHHHHHhcCCCCCCcHHHHHHHHHHHhhHH
Confidence 99999999999999999999999999999999999999999999999999999999999998767999999999999999
Q ss_pred cccchhHHHHHHHHHHHhhcccccCCCccccCcccceEEEEecCCCCCCcEEEEeEEEeccccCCCCCccccCCceEEEE
Q 008712 162 FTSQFGDLIADLAIDATTTVGVDLGQGLREVDIKKYIKVEKVPGGQLEDSRVLKGVMFNKDVVAPGKMRRKIVNPRIILL 241 (557)
Q Consensus 162 ~~~~~~~~ls~li~~a~~~v~~~~~~g~~~~d~~~~I~I~~~~G~~~~ds~li~Giv~~~~~~~~~~~~~~~~n~kIll~ 241 (557)
+.+.|+++|++++++|+.+++.+. +|...+|++ +|+|++..|+++.+|++++|++|++++.++ .|+++++||||+++
T Consensus 173 ~~~~~~~~i~~livdAv~~V~~~~-~G~~~~dl~-~I~I~k~~Gg~~~ds~lv~G~v~dk~~~~~-~m~~~ien~kIll~ 249 (553)
T 3ko1_A 173 AVAGAREYIADIVVKAVTQVAELR-GDKWYVDLD-NIQIVKKAGGSINDTQLVYGIVVDKEVVHP-GMPKRLENAKIALI 249 (553)
T ss_dssp SCCTTHHHHHHHHHHHHHHHCCCT-TSSCCCCGG-GEEEEECCCSCGGGCEEESEEEECSCBSCT-TSCSCCBSCEEEEE
T ss_pred hhhhHHHHHHHHHHHHHHHHHHhc-CCceEEech-hHHHHHHhCCccccceeeEEEEecccccCC-CCccccccceEEEe
Confidence 999999999999999999998632 355567886 599999999999999999999999999999 89999999999999
Q ss_pred ecCCccccccccceEEecCHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEeCCCCCHHHHHHHHHcCCeEEecCChhHHH
Q 008712 242 DSPLEYKKGENQTNAELVKEEDWEVLLKMEEEYIENLCMQILKFKPDLVITEKGLSDLACHYLSKAGVSAIRRLRKTDNN 321 (557)
Q Consensus 242 ~~~Le~~k~~~~~~~~i~~~~~l~~~~~~E~~~i~~~l~~i~~~~~~lIi~~~~i~~~al~~L~~~~I~~i~~v~~~~l~ 321 (557)
+++|+++++++++++.+++++++.++++.|++++++++++|.+.|+||||++++|++.+++||.++||++++++++.+|+
T Consensus 250 d~~Le~~k~e~~~~v~Iss~~~l~~~~~~E~~~l~~~vekI~~~g~~vvI~~~~I~~~al~~L~~~gI~~v~~v~k~~le 329 (553)
T 3ko1_A 250 DASLEVEKPELDAEIRINDPTQMQKFLDEEENLIKEKVDKILATGANVIICQKGIDEVAQSYLAKKGVLAVRRAKKSDLE 329 (553)
T ss_dssp CSCBSCCCCTTTCCCCCCSHHHHHHHHHHHHHHHHHHHHHHHTTCCSEEECSSCBCSHHHHHHHHHTCEEECCCCHHHHH
T ss_pred cCcccccCcccCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhhcceEEEeccChHHHHHHHHHhcchhhhhhhhhhhHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhCCeeccCCCCCCCCCcCCccceEEEEEECCeEEEEEEecCCCCeEEEEEccCCHHHHHHHHHHHHHHHHHHHHH
Q 008712 322 RIAKACGAVIVNRPDELQESDVGTGAGLFEVKKIGDEFFAFIVDCKDPKACTVLLRGASKDLLNEVERNLQDAMSVARNI 401 (557)
Q Consensus 322 ~i~~~tG~~ii~~~~~l~~~~lG~~~~~v~~~~ig~~~~~~l~~~~~~~~~TIll~G~t~~~l~e~~~~l~dal~~~~~~ 401 (557)
||+++||++++++++++++++||+ |+.|++.++|+++|++|+||.+++.|||+|||+|+.+++|+||+++|||+++|++
T Consensus 330 ria~~tGa~ivs~l~~l~~~~LG~-a~~v~~~~ig~d~~~~i~g~~~~~~~TI~lrG~te~~l~E~er~l~DAl~~~r~a 408 (553)
T 3ko1_A 330 KLARATGGRVVSNIDEISEQDLGY-ASLIEERKVGEDKMVFVEGAKNPKSISILIRGGLERLVDETERALRDALGTVADV 408 (553)
T ss_dssp HHHTTTTCCEESCGGGCCSSSSEE-CSEEECCCCSSSCCEEEESCSSSSCEEEEECCSSTTHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHhhCCeeecccccCChhhcch-HHHHHHhhcCcceEEEeccCCCCceEEEeeeccHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999 9999999999999999999999999999999999999999999999999999999
Q ss_pred HhCCCcccCCCchHHHHHHHHHhhhccCCCccchHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHhCCCCceeeEe
Q 008712 402 IKNPKLVPGGGATELTVSATLKQKSSSIEGIEKWPYEAAAIAFEAIPRTLAQNCGINVIRTMTALQGKHANGENAWIGID 481 (557)
Q Consensus 402 ~~~g~vvpGGG~~E~~l~~~L~~~~~~~~~~~~~~~~~~a~aL~~ip~~L~~NaG~d~~~~~~~l~~~~~~~~~~~~Gid 481 (557)
+++|++|||||++|++|+.+|++++.+.++++|+++++|++||+.||++|++|||+|+.+++.+|+..|..+++.++|||
T Consensus 409 v~~g~iVpGGGa~e~~~s~~L~~~~~~~~g~eq~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~~G~d 488 (553)
T 3ko1_A 409 IKDGRAIAGGGAVEIEIAKKLRKYAPQVGGKEQLAVEAYANALESLVSILIENAGFDPIDLLMKLRSTHENENNKWYGID 488 (553)
T ss_dssp HHHCEEEETTTHHHHHHHHHHHHHHHHHCSHHHHHHHHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHTTCSGGGTTEEEE
T ss_pred hhcCceecCCceeEeHHHHHHHHhccccCChhHhHHHHHHHHHHhHHHHHHHhcCCCHHHHHHHHHHHhhCcCCceEeEE
Confidence 99999999999999999999999988889999999999999999999999999999999999999999876543579999
Q ss_pred CCCCccccccccccccchHHHHHHHHHHHHHHHHHHhhhHhhcCCccCCC
Q 008712 482 GNTGAISDMKERKIWDAYNVKAQTFKTAIEAACMLLRIDDIVSGIKKKQA 531 (557)
Q Consensus 482 ~~~~~i~d~~~~gI~dp~~vk~~~l~~A~e~a~~lL~iD~ii~~~~~~~~ 531 (557)
+.+|++.||++.|||||+.||+++|+.|+|+|++|||||++|...|++.|
T Consensus 489 ~~~g~~~d~~~~gI~dp~~vk~~al~~A~e~a~~iL~iD~ii~~~~~~~~ 538 (553)
T 3ko1_A 489 LYAGQPVDMWQKGVIEPALVKMNAIKAATEAATLVLRIDDVVSAGKKSGG 538 (553)
T ss_dssp TTTTEEEESGGGSCEEETTHHHHHHHHHHHHHHHHHHEEEECCC------
T ss_pred eecCCchHHHHhCccchhhhhhhhhhhcchhheEEEehHHHHHhhhhccC
Confidence 99999999999999999999999999999999999999999998876544
No 2
>1a6d_B Thermosome (beta subunit); group II chaperonin, CCT, TRIC, PR folding, ATPase, chaperonin; 2.60A {Thermoplasma acidophilum} SCOP: a.129.1.2 c.8.5.2 d.56.1.2 PDB: 1a6e_B* 1e0r_B
Probab=100.00 E-value=8.4e-114 Score=933.35 Aligned_cols=524 Identities=38% Similarity=0.637 Sum_probs=487.1
Q ss_pred CCCcccccccccccccHHHHHHHHHHHHHHHHHhhhcCCCCCCceeeecCCCCEEEeccHHHHhhcccccChHHHHHHHH
Q 008712 2 HSPVLVLKDSLKRESGTKVHHANIQASKAVADIIRTTLGPRSMLKMLLDASGGIVVTNDGNAILRELDVAHPAAKSMIEL 81 (557)
Q Consensus 2 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~l~~~v~sslGP~G~~k~i~~~~g~~~iTnDG~tIlk~l~~~hP~a~ll~~~ 81 (557)
++|..+++++.+..+|.++|.+|+.||..|+++|+|||||+||+|||+++.|+++|||||+||||+|+++||+|+|++++
T Consensus 4 ~~~~~~l~~~~~~~~g~~a~~~ni~a~~~la~~vkttLGP~G~~kml~~~~g~~~iTnDG~tIlk~i~v~hP~Akll~e~ 83 (543)
T 1a6d_B 4 GQPIFILKEGTKRESGKDAMKENIEAAIAISNSVRSSLGPRGMDKMLVDSLGDIVITNDGVTILKEMDVEHPAAKMMVEV 83 (543)
T ss_dssp ----------------CHHHHHHHHHHHHHHHHHHTTSSTTCCCEEEECTTCCEEEECCHHHHHHHSCCCSHHHHHHHHH
T ss_pred CcchhhcCCcchhhhhHHHHHHHHHHHHHHHHHHHhccCCCCCeEEEEcCCCCeEEeCCHHHHHHHhhccchHHHHHHHH
Confidence 46777889999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhhccccCChhHHHHHHHHHHHHHHHHHhcCCChhhHHHHHHHHHHHHHHHHhhcccccCCCCHHHHHHHHHHHhhcc
Q 008712 82 SRTQDEEVGDGTTSVIVLAGEMLHVAEEFIDKNYHPTVICRAYNKALEDAVAVLDKIAMPIDTNDRATMLGLVKSCIGTK 161 (557)
Q Consensus 82 ~~~~~~~~GDGttt~viLa~~Ll~~~~~li~~gi~p~~I~~g~~~a~~~~~~~L~~~s~~v~~~~~~~l~~ia~t~l~sK 161 (557)
|++|++++||||||+++||++||+++.+++++|+||..|++||++|++.++++|++++++++..+++.|.++++|+|+||
T Consensus 84 a~~qd~e~GDGTTtvvvLA~~LL~~a~~ll~~GihP~~I~~G~~~A~~~a~~~L~~~a~~v~~~~~~~l~~va~tsl~sK 163 (543)
T 1a6d_B 84 SKTQDSFVGDGTTTAVIIAGGLLQQAQGLINQNVHPTVISEGYRMASEEAKRVIDEISTKIGADEKALLLKMAQTSLNSK 163 (543)
T ss_dssp HTCTTCCCTTHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHHCEECCTTHHHHHHHHHHHHHTTS
T ss_pred HHhcCCEECCChhHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHhccc
Confidence 99999999999999999999999999999999999999999999999999999999999998767899999999999999
Q ss_pred cccchhHHHHHHHHHHHhhcccccCCCccccCcccceEEEEecCCCCCCcEEEEeEEEeccccCCCCCccccCCceEEEE
Q 008712 162 FTSQFGDLIADLAIDATTTVGVDLGQGLREVDIKKYIKVEKVPGGQLEDSRVLKGVMFNKDVVAPGKMRRKIVNPRIILL 241 (557)
Q Consensus 162 ~~~~~~~~ls~li~~a~~~v~~~~~~g~~~~d~~~~I~I~~~~G~~~~ds~li~Giv~~~~~~~~~~~~~~~~n~kIll~ 241 (557)
+.++|+++|++++++|+.+++++. +|...+|++ +|+|++++|+++++|++++|++|++++.++ .||++++||||+++
T Consensus 164 i~~~~~~~i~~livdAv~~v~~~~-~g~~~~d~~-~I~V~k~~G~~~~ds~lv~G~v~dk~~~~~-~m~~~ien~kIll~ 240 (543)
T 1a6d_B 164 SASVAKDKLAEISYEAVKSVAELR-DGKYYVDFD-NIQVVKKQGGAIDDTQLINGIIVDKEKVHP-GMPDVVKDAKIALL 240 (543)
T ss_dssp GGGGGHHHHHHHHHHHHHHHEEEC-SSSEEECGG-GEEEEEEESSCGGGCEEESEEEESCCCSST-TSCSEEEEEEEEEE
T ss_pred cccccHHHHHHHHHHHHHHhcccc-cCCcccccc-eEEEEEecCCCccceeEEccEEEecCCCCC-CCcceecCCeEEEE
Confidence 999999999999999999998531 244467774 799999999999999999999999999999 89999999999999
Q ss_pred ecCCccccccccceEEecCHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEeCCCCCHHHHHHHHHcCCeEEecCChhHHH
Q 008712 242 DSPLEYKKGENQTNAELVKEEDWEVLLKMEEEYIENLCMQILKFKPDLVITEKGLSDLACHYLSKAGVSAIRRLRKTDNN 321 (557)
Q Consensus 242 ~~~Le~~k~~~~~~~~i~~~~~l~~~~~~E~~~i~~~l~~i~~~~~~lIi~~~~i~~~al~~L~~~~I~~i~~v~~~~l~ 321 (557)
+++|++++++.++++.++++++++.+++.|+++++++++++++.|++|||++++|++.+++||.++||++++++++++|+
T Consensus 241 ~~~Le~~k~e~~~~v~i~~~~~l~~~~~~E~~~l~~~le~I~~~g~~lvi~~~~I~~~al~~L~~~~I~av~~v~k~~le 320 (543)
T 1a6d_B 241 DAPLEIKKPEFDTNLRIEDPSMIQKFLAQEENMLREMVDKIKSVGANVVITQKGIDDMAQHYLSRAGIYAVRRVKKSDMD 320 (543)
T ss_dssp SSCBSCCCCSSEEEECCCSTTHHHHHHHHHHHHHHHHHHHHHHTTCCEEEESSCBCHHHHHHHHHTTCEEECSCCHHHHH
T ss_pred ecccccccccCCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCEEEECCCcCHHHHHHHHHCCeeEeccCCHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhCCeeccCCCCCCCCCcCCccceEEEEEECCeEEEEEEecCCCCeEEEEEccCCHHHHHHHHHHHHHHHHHHHHH
Q 008712 322 RIAKACGAVIVNRPDELQESDVGTGAGLFEVKKIGDEFFAFIVDCKDPKACTVLLRGASKDLLNEVERNLQDAMSVARNI 401 (557)
Q Consensus 322 ~i~~~tG~~ii~~~~~l~~~~lG~~~~~v~~~~ig~~~~~~l~~~~~~~~~TIll~G~t~~~l~e~~~~l~dal~~~~~~ 401 (557)
|||++||++++++++++++++||+ |+.|++.++|+++|++|+||+++++|||+|||+|+.+++|+||+++|||+++|++
T Consensus 321 ~ia~~tGa~iis~l~~l~~~~LG~-a~~v~~~~ig~~~~~~~~g~~~~~~~TI~lrG~t~~~l~E~er~l~DAl~~~r~a 399 (543)
T 1a6d_B 321 KLAKATGASIVSTIDEISSSDLGT-AERVEQVKVGEDYMTFVTGCKNPKAVSILVRGETEHVVDEMERSITDSLHVVASA 399 (543)
T ss_dssp HHHHHHTCCEESCGGGCCGGGCEE-EEEEEEEEETTEEEEEEEEESSSSCEEEEEEESSHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHhCCceecccccCCHHHCCC-ceEEEEEEecCceEEEEecCCCCceEEEEecCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999 9999999999999999999999999999999999999999999999999999999
Q ss_pred HhCCCcccCCCchHHHHHHHHHhhhccCCCccchHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHhCCCCceeeEe
Q 008712 402 IKNPKLVPGGGATELTVSATLKQKSSSIEGIEKWPYEAAAIAFEAIPRTLAQNCGINVIRTMTALQGKHANGENAWIGID 481 (557)
Q Consensus 402 ~~~g~vvpGGG~~E~~l~~~L~~~~~~~~~~~~~~~~~~a~aL~~ip~~L~~NaG~d~~~~~~~l~~~~~~~~~~~~Gid 481 (557)
+++|++|||||++|++|+.+|++++.+.++++|+++++|++||+.||++|++|||+|+.+++.+|+..|..++ .++|||
T Consensus 400 ~~~~~ivpGGGa~e~~~s~~L~~~~~~~~g~~q~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~-~~~G~d 478 (543)
T 1a6d_B 400 LEDGAYAAGGGATAAEIAFRLRSYAQKIGGRQQLAIEKFADAIEEIPRALAENAGLDPIDILLKLRAEHAKGN-KTYGIN 478 (543)
T ss_dssp HHHCEEEETTTHHHHHHHHHHHHHHHHTCSSHHHHHHHHHHHHTHHHHHHHHHHTCCHHHHHHHHHHHHHTTC-TTEEEE
T ss_pred HHCCCccCCccHHHHHHHHHHHHHhhhcCChHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHhCCC-CCeeEe
Confidence 9999999999999999999999998888999999999999999999999999999999999999999997664 679999
Q ss_pred CCCCccccccccccccchHHHHHHHHHHHHHHHHHHhhhHhhcCCccCC
Q 008712 482 GNTGAISDMKERKIWDAYNVKAQTFKTAIEAACMLLRIDDIVSGIKKKQ 530 (557)
Q Consensus 482 ~~~~~i~d~~~~gI~dp~~vk~~~l~~A~e~a~~lL~iD~ii~~~~~~~ 530 (557)
+.+|++.||.+.|||||+.||+++|+.|+|+|++|||||++|...|++.
T Consensus 479 ~~~g~~~d~~~~gI~dp~~vk~~al~~A~e~a~~iL~id~iI~~~~~~~ 527 (543)
T 1a6d_B 479 VFTGEIEDMVKNGVIEPIRVGKQAIESATEAAIMILRIDDVIATKSSSS 527 (543)
T ss_dssp TTTTEEEETTTTTCEEEHHHHHHHHHHHHHHHHHHHHEEEEEC------
T ss_pred CCCCcccchhhcCceecHHHHHHHHHHHHHHHHHHHHHHHHHhcCccCC
Confidence 9999999999999999999999999999999999999999999876533
No 3
>1q3q_A Thermosome alpha subunit; chaperone, chaperonin; HET: ANP; 2.30A {Thermococcus SP} SCOP: a.129.1.2 c.8.5.2 d.56.1.2 PDB: 1q2v_A* 1q3s_A* 1q3r_A
Probab=100.00 E-value=1.3e-113 Score=931.87 Aligned_cols=525 Identities=38% Similarity=0.640 Sum_probs=500.6
Q ss_pred CCCCcccccccccccccHHHHHHHHHHHHHHHHHhhhcCCCCCCceeeecCCCCEEEeccHHHHhhcccccChHHHHHHH
Q 008712 1 MHSPVLVLKDSLKRESGTKVHHANIQASKAVADIIRTTLGPRSMLKMLLDASGGIVVTNDGNAILRELDVAHPAAKSMIE 80 (557)
Q Consensus 1 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~l~~~v~sslGP~G~~k~i~~~~g~~~iTnDG~tIlk~l~~~hP~a~ll~~ 80 (557)
|++|+.+++++.+..+|.++|.+|+.||..|+++|+|||||+||+|||+++.|+++|||||+||||+|+++||+|+|+++
T Consensus 5 ~~~~~~~l~~~~~~~~g~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~G~~~iTnDG~tIlk~i~v~hP~Akll~e 84 (548)
T 1q3q_A 5 SGQPVVILPEGTQRYVGRDAQRLNILAARIIAETVRTTLGPKGMDKMLVDSLGDIVVTNDCATILDKIDLQHPAAKMMVE 84 (548)
T ss_dssp ----CCCSCTTCEEEEHHHHHHHHHHHHHHHHHHHHTTCSTTCCEEEEECTTCCEEEESCHHHHHHHSCCCSHHHHHHHH
T ss_pred CCCCcccccCCcceechHHHHHHHHHHHHHHHHHHHhccCCCCceEEEEcCCCCeEEECCHHHHHHHhhccchHHHHHHH
Confidence 35677788999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhhccccCChhHHHHHHHHHHHHHHHHHhcCCChhhHHHHHHHHHHHHHHHHhhcccccCCCCHHHHHHHHHHHhhc
Q 008712 81 LSRTQDEEVGDGTTSVIVLAGEMLHVAEEFIDKNYHPTVICRAYNKALEDAVAVLDKIAMPIDTNDRATMLGLVKSCIGT 160 (557)
Q Consensus 81 ~~~~~~~~~GDGttt~viLa~~Ll~~~~~li~~gi~p~~I~~g~~~a~~~~~~~L~~~s~~v~~~~~~~l~~ia~t~l~s 160 (557)
+|++|++++||||||+++||++||+++.+++++|+||..|++||++|++.++++|++++++++..+++.|.++++|+|+|
T Consensus 85 ~a~~qd~e~GDGTTtvvvLA~~LL~~a~~ll~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~d~~~l~~va~tsl~s 164 (548)
T 1q3q_A 85 VAKTQDKEAGDGTTTAVVIAGELLRKAEELLDQNIHPSIITKGYALAAEKAQEILDEIAIRVDPDDEETLLKIAATSITG 164 (548)
T ss_dssp HHHHHHHHTSSCHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHHCEECCTTCHHHHHHHHHHHSCS
T ss_pred HHHhcCCEECCChhHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHhhc
Confidence 99999999999999999999999999999999999999999999999999999999999999877789999999999999
Q ss_pred ccccchhHHHHHHHHHHHhhcccccCCCccccCcccceEEEEecCCCCCCcEEEEeEEEeccccCCCCCccccCCceEEE
Q 008712 161 KFTSQFGDLIADLAIDATTTVGVDLGQGLREVDIKKYIKVEKVPGGQLEDSRVLKGVMFNKDVVAPGKMRRKIVNPRIIL 240 (557)
Q Consensus 161 K~~~~~~~~ls~li~~a~~~v~~~~~~g~~~~d~~~~I~I~~~~G~~~~ds~li~Giv~~~~~~~~~~~~~~~~n~kIll 240 (557)
|+.++|+++|++++++|+.+++++. .|..++|++ +|+|++++|+++++|++++|++|++++.++ .||++++||||++
T Consensus 165 Ki~~~~~~~i~~livdAv~~V~~~~-~g~~~~d~~-~I~V~k~~G~~~~ds~lv~G~v~dk~~~~~-~m~~~ien~kIll 241 (548)
T 1q3q_A 165 KNAESHKELLAKLAVEAVKQVAEKK-DGKYVVDLD-NIKFEKKAGEGVEESELVRGVVIDKEVVHP-RMPKRVENAKIAL 241 (548)
T ss_dssp STTGGGHHHHHHHHHHHHHHHCEES-SSSEECCGG-GEEEEEEEBSCGGGCEEESSEEESCCCSST-TSCSEESSEEEEE
T ss_pred cccccchHHHHHHHHHHHHHhcccc-CCCccccCC-eEEEEEecCCCccceEEEeeEEEeccCCCC-CCcceecCCEEEE
Confidence 9999999999999999999998531 243467764 799999999999999999999999999999 8999999999999
Q ss_pred EecCCccccccccceEEecCHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEeCCCCCHHHHHHHHHcCCeEEecCChhHH
Q 008712 241 LDSPLEYKKGENQTNAELVKEEDWEVLLKMEEEYIENLCMQILKFKPDLVITEKGLSDLACHYLSKAGVSAIRRLRKTDN 320 (557)
Q Consensus 241 ~~~~Le~~k~~~~~~~~i~~~~~l~~~~~~E~~~i~~~l~~i~~~~~~lIi~~~~i~~~al~~L~~~~I~~i~~v~~~~l 320 (557)
++++|++++++.++++.++++++++.++++|+++++++++++++.|++|||++++|++++++||.++||++++++++++|
T Consensus 242 ~~~~Le~~k~e~~~~v~i~~~~~l~~~~~~E~~~l~~~le~I~~~g~~lvi~~~~I~~~al~~L~~~~I~av~~~~k~~l 321 (548)
T 1q3q_A 242 INEALEVKKTETDAKINITSPDQLMSFLEQEEKMLKDMVDHIAQTGANVVFVQKGIDDLAQHYLAKYGIMAVRRVKKSDM 321 (548)
T ss_dssp ECSCBSCCCCSSCCCEEECSHHHHHHHHHHHHHHHHHHHHHHHHHTCCEEEESSCBCHHHHHHHHHTTCEEECSCCHHHH
T ss_pred EecCcCcccccCCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHHhCcCEEEEcCCcCHHHHHHHHHCCcEEEccCCHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhCCeeccCCCCCCCCCcCCccceEEEEEECCeEEEEEEecCCCCeEEEEEccCCHHHHHHHHHHHHHHHHHHHH
Q 008712 321 NRIAKACGAVIVNRPDELQESDVGTGAGLFEVKKIGDEFFAFIVDCKDPKACTVLLRGASKDLLNEVERNLQDAMSVARN 400 (557)
Q Consensus 321 ~~i~~~tG~~ii~~~~~l~~~~lG~~~~~v~~~~ig~~~~~~l~~~~~~~~~TIll~G~t~~~l~e~~~~l~dal~~~~~ 400 (557)
+|||++||++++++++++++++||+ |+.|++.++|+++|++|++|.++++|||+|||+|+.+++|.||+++|||+++|+
T Consensus 322 e~ia~~tGa~ii~~l~~~~~~~LG~-a~~v~~~~ig~~~~~~~~g~~~~~~~TI~lrG~te~~l~E~er~l~DAl~~~r~ 400 (548)
T 1q3q_A 322 EKLAKATGAKIVTNVKDLTPEDLGY-AEVVEERKLAGENMIFVEGCKNPKAVTILIRGGTEHVIDEVERALEDAVKVVKD 400 (548)
T ss_dssp HHHHHHHCCCCBSSGGGCCGGGCEE-ESEEEEEEETTEEEEEEECCSSCSSEEEEEEESSHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhCCeEecccccCCHHHCCC-ceEEEEEEecCceEEEEecCCCCCeEEEEECCCChHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999 999999999999999999999999999999999999999999999999999999
Q ss_pred HHhCCCcccCCCchHHHHHHHHHhhhccCCCccchHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHhCCCCceeeE
Q 008712 401 IIKNPKLVPGGGATELTVSATLKQKSSSIEGIEKWPYEAAAIAFEAIPRTLAQNCGINVIRTMTALQGKHANGENAWIGI 480 (557)
Q Consensus 401 ~~~~g~vvpGGG~~E~~l~~~L~~~~~~~~~~~~~~~~~~a~aL~~ip~~L~~NaG~d~~~~~~~l~~~~~~~~~~~~Gi 480 (557)
++++|++|||||++|++|+.+|++++.+.++++|+++++|++||+.||++|++|||+|+.+++.+|+..|..++ .++||
T Consensus 401 a~~~~~ivpGGGa~e~~~~~~L~~~~~~~~g~~q~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~-~~~G~ 479 (548)
T 1q3q_A 401 VMEDGAVLPAGGAPEIELAIRLDEYAKQVGGKEALAIENFADALKIIPKTLAENAGLDTVEMLVKVISEHKNRG-LGIGI 479 (548)
T ss_dssp HHHSCEEEECTTHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHTTHHHHHHHHHTTCCHHHHHHHHHHHHHHHC-TTEEE
T ss_pred HHHCCCcccCCcHHHHHHHHHHHHHhhhcCCcHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHhhcCC-CCcce
Confidence 99999999999999999999999998878889999999999999999999999999999999999999886543 57999
Q ss_pred eCCCCccccccccccccchHHHHHHHHHHHHHHHHHHhhhHhhcCCccCC
Q 008712 481 DGNTGAISDMKERKIWDAYNVKAQTFKTAIEAACMLLRIDDIVSGIKKKQ 530 (557)
Q Consensus 481 d~~~~~i~d~~~~gI~dp~~vk~~~l~~A~e~a~~lL~iD~ii~~~~~~~ 530 (557)
|..+|++.||.+.|||||+.||+++|+.|+|+|++|||||++|...|+++
T Consensus 480 d~~~g~~~d~~~~gI~dp~~vk~~al~~A~e~a~~iL~iD~iI~~~~~~~ 529 (548)
T 1q3q_A 480 DVFEGKPADMLEKGIIEPLRVKKQAIKSASEAAIMILRIDDVIAAKATKP 529 (548)
T ss_dssp ETTTTEEEETTTTTCEEEHHHHHHHHHHHHHHHHHHHTCCEEEECCC---
T ss_pred eCCCCCccchhhcCCEecHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcCC
Confidence 99999999999999999999999999999999999999999999877543
No 4
>3ruv_A Chaperonin, CPN; double-ring, protein folding machinery, group II chaperonin, binding, chaperone; HET: ANP; 2.24A {Methanococcus maripaludis} PDB: 3rus_A* 3ruw_A* 3ruq_A* 3los_A 3kfb_A* 3izi_A 3izj_A 3izm_A 3izh_A 3kfe_A* 3iyf_A* 3kfk_A* 3izk_A 3izl_A 3j03_A 3izn_A 3j02_A
Probab=100.00 E-value=2.6e-113 Score=928.48 Aligned_cols=520 Identities=37% Similarity=0.636 Sum_probs=499.6
Q ss_pred CCcccccccccccccHHHHHHHHHHHHHHHHHhhhcCCCCCCceeeecCCCCEEEeccHHHHhhcccccChHHHHHHHHH
Q 008712 3 SPVLVLKDSLKRESGTKVHHANIQASKAVADIIRTTLGPRSMLKMLLDASGGIVVTNDGNAILRELDVAHPAAKSMIELS 82 (557)
Q Consensus 3 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~l~~~v~sslGP~G~~k~i~~~~g~~~iTnDG~tIlk~l~~~hP~a~ll~~~~ 82 (557)
+| .+|+++.+.++|.++|.+|+.||+.|+++|+|||||+||+|||+++.|+++|||||+||||+|+++||+|+|++++|
T Consensus 4 ~p-~~l~~~~~~~~g~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~G~~~iTnDG~tIlk~i~v~hP~Akll~e~a 82 (543)
T 3ruv_A 4 QP-GVLPENMKRYMGRDAQRMNILAGRIIAETVRSTLGPKGMDKMLVDDLGDVVVTNDGVTILREMSVEHPAAKMLIEVA 82 (543)
T ss_dssp CC-CSSCSSEEEEETHHHHHHHHHHHHHHHHHHHTTCSTTCCEEEEECTTSCEEEECCHHHHHHHSCCCCHHHHHHHHHH
T ss_pred CC-eeecCCcchhccHHHHHHHHHHHHHHHHHHHhccCCCCCeEEEECCCCCEEEECCHHHHHHHccCcCHHHHHHHHHH
Confidence 57 78899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhhccccCChhHHHHHHHHHHHHHHHHHhcCCChhhHHHHHHHHHHHHHHHHhhcccccCCCCHHHHHHHHHHHhhccc
Q 008712 83 RTQDEEVGDGTTSVIVLAGEMLHVAEEFIDKNYHPTVICRAYNKALEDAVAVLDKIAMPIDTNDRATMLGLVKSCIGTKF 162 (557)
Q Consensus 83 ~~~~~~~GDGttt~viLa~~Ll~~~~~li~~gi~p~~I~~g~~~a~~~~~~~L~~~s~~v~~~~~~~l~~ia~t~l~sK~ 162 (557)
++|++++||||||++|||++||+++.+++++|+||..|++||++|++.++++|++++++++..+++.|.++|+|+++||+
T Consensus 83 ~~qd~e~GDGTTtvvVLA~~Ll~~a~~ll~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~d~~~L~~va~tsl~sK~ 162 (543)
T 3ruv_A 83 KTQEKEVGDGTTTAVVVAGELLRKAEELLDQNVHPTIVVKGYQAAAQKAQELLKTIACEVGAQDKEILTKIAMTSITGKG 162 (543)
T ss_dssp HHHHHHTSSCHHHHHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHHHCEECCTTCHHHHHHHHHHHHHHTC
T ss_pred HHHHhhhCCCcccHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHhhCCCCCCCHHHHHHHHHHHhcccc
Confidence 99999999999999999999999999999999999999999999999999999999999987679999999999999999
Q ss_pred ccchhHHHHHHHHHHHhhcccccCCCccccCcccceEEEEecCCCCCCcEEEEeEEEeccccCCCCCccccCCceEEEEe
Q 008712 163 TSQFGDLIADLAIDATTTVGVDLGQGLREVDIKKYIKVEKVPGGQLEDSRVLKGVMFNKDVVAPGKMRRKIVNPRIILLD 242 (557)
Q Consensus 163 ~~~~~~~ls~li~~a~~~v~~~~~~g~~~~d~~~~I~I~~~~G~~~~ds~li~Giv~~~~~~~~~~~~~~~~n~kIll~~ 242 (557)
.+.|+++|++++++|+.+++.+ +|. +|++ +|+|++..|+++.+|++++|++|++++.++ .|+++++||||++++
T Consensus 163 ~~~~~~~i~~livdAv~~V~~~--~g~--~dl~-~I~V~k~~Gg~~~ds~lv~G~v~dk~~~~~-~m~~~~~n~kIll~~ 236 (543)
T 3ruv_A 163 AEKAKEKLAEIIVEAVSAVVDD--EGK--VDKD-LIKIEKKSGASIDDTELIKGVLVDKERVSA-QMPKKVTDAKIALLN 236 (543)
T ss_dssp GGGCCHHHHHHHHHHHHHHCCT--TSC--CCGG-GEEEEEEECSCGGGCEEESSEEESCCCSCT-TSCSEEEEEEEEEES
T ss_pred cchhHHHHHHHHHHHHHHhhcc--CCC--cccc-eEEEEEcCCCCcccceeecceEEeccccCc-cccccccCcEEEEEc
Confidence 9999999999999999999863 243 6775 599999999999999999999999999998 899999999999999
Q ss_pred cCCccccccccceEEecCHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEeCCCCCHHHHHHHHHcCCeEEecCChhHHHH
Q 008712 243 SPLEYKKGENQTNAELVKEEDWEVLLKMEEEYIENLCMQILKFKPDLVITEKGLSDLACHYLSKAGVSAIRRLRKTDNNR 322 (557)
Q Consensus 243 ~~Le~~k~~~~~~~~i~~~~~l~~~~~~E~~~i~~~l~~i~~~~~~lIi~~~~i~~~al~~L~~~~I~~i~~v~~~~l~~ 322 (557)
++|+++++++++++.+++++++.++++.|++++++++++|++.|+||||++++|++.+++||.++||++++++++.+|+|
T Consensus 237 ~~Le~~k~e~~~~v~Iss~~~l~~~~~~E~~~l~~~ve~I~~~g~~vvi~~~~I~~~al~~L~~~gI~~v~~v~k~~le~ 316 (543)
T 3ruv_A 237 CAIEIKETETDAEIRITDPAKLMEFIEQEEKMLKDMVAEIKASGANVLFCQKGIDDLAQHYLAKEGIVAARRVKKSDMEK 316 (543)
T ss_dssp SCBSCCCCSSCCCEEECSTTHHHHHHHHHHHHHHHHHHHHHHHTCSEEEESSCBCHHHHHHHHHTTCEEECSCCHHHHHH
T ss_pred ccccccccccCceeEeCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCEEEEeCCccHHHHHHHHHcCcEEEeeCCHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhCCeeccCCCCCCCCCcCCccceEEEEEECCeEEEEEEecCCCCeEEEEEccCCHHHHHHHHHHHHHHHHHHHHHH
Q 008712 323 IAKACGAVIVNRPDELQESDVGTGAGLFEVKKIGDEFFAFIVDCKDPKACTVLLRGASKDLLNEVERNLQDAMSVARNII 402 (557)
Q Consensus 323 i~~~tG~~ii~~~~~l~~~~lG~~~~~v~~~~ig~~~~~~l~~~~~~~~~TIll~G~t~~~l~e~~~~l~dal~~~~~~~ 402 (557)
||++||++++++++++++++||+ |+.|++.++|+++|++|++|.++..|||+|||+|+.+++|+||+++|||+++|+++
T Consensus 317 ia~~tGa~iis~l~~l~~~~LG~-a~~v~~~~ig~~~~~~i~g~~~~~~~TI~lrG~te~~l~E~kr~l~DAl~~~r~av 395 (543)
T 3ruv_A 317 LAKATGANVIAAIAALSAQDLGD-AGLVEERKISGDSMIFVEECKHPKAVTMLIRGTTEHVIEEVARAVDDAVGVVGCTI 395 (543)
T ss_dssp HHHHHCCCEESCGGGCCGGGCEE-EEEEEEEEETTEEEEEEECCSSCSSEEEEEEESSHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHhCCceecccccCCHHHCCc-ccEEEEEEeCCceEEEEECCCCCceeEEEecCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999 99999999999999999999999999999999999999999999999999999999
Q ss_pred hCCCcccCCCchHHHHHHHHHhhhccCCCccchHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHh-CCCCceeeEe
Q 008712 403 KNPKLVPGGGATELTVSATLKQKSSSIEGIEKWPYEAAAIAFEAIPRTLAQNCGINVIRTMTALQGKHA-NGENAWIGID 481 (557)
Q Consensus 403 ~~g~vvpGGG~~E~~l~~~L~~~~~~~~~~~~~~~~~~a~aL~~ip~~L~~NaG~d~~~~~~~l~~~~~-~~~~~~~Gid 481 (557)
++|++|||||++|++|+.+|++++.+.++++|+++++|++||+.||++|++|||+|+.+++.+|+..|. .++ .++|||
T Consensus 396 ~~g~iVpGGGa~e~~~s~~L~~~~~~~~g~eq~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~-~~~G~d 474 (543)
T 3ruv_A 396 EDGRIVSGGGSTEVELSMKLREYAEGISGREQLAVRAFADALEVIPRTLAENAGLDAIEILVKVRAAHASNGN-KCAGLN 474 (543)
T ss_dssp HHCEEEETTTHHHHHHHHHHHHHHHTCCTTHHHHHHHHHHHHTHHHHHHHHHTTCCHHHHHHHHHHHHTTTCC-TTEEEC
T ss_pred hcCCeecCCcHHHHHHHHHHHHHhhcCChHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHhhcCC-ceeeee
Confidence 999999999999999999999999888999999999999999999999999999999999999999996 554 689999
Q ss_pred CCCCccccccccccccchHHHHHHHHHHHHHHHHHHhhhHhhcCCccCCC
Q 008712 482 GNTGAISDMKERKIWDAYNVKAQTFKTAIEAACMLLRIDDIVSGIKKKQA 531 (557)
Q Consensus 482 ~~~~~i~d~~~~gI~dp~~vk~~~l~~A~e~a~~lL~iD~ii~~~~~~~~ 531 (557)
+.+|++.||++.|||||+.||+++|+.|+|+|++|||||++|...|.+.|
T Consensus 475 ~~~g~~~dm~~~gI~dp~~vk~~al~~A~~~a~~iL~id~ii~~~~~~~~ 524 (543)
T 3ruv_A 475 VFTGAVEDMCENGVVEPLRVKTQAIQSAAESTEMLLRIDDVIAAEKLRGA 524 (543)
T ss_dssp TTTCSEEETTTTTCEEEHHHHHHHHHHHHHHHHHHHTCCEEEEEC-----
T ss_pred CCCCccccHHHcCCEecHHHHHHHHHHHHHHHHHHHhHHhheecCccCCC
Confidence 99999999999999999999999999999999999999999998876544
No 5
>3iyg_A T-complex protein 1 subunit alpha; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=1.3e-112 Score=921.21 Aligned_cols=512 Identities=31% Similarity=0.491 Sum_probs=490.5
Q ss_pred ccccccHHHHHHHHHHHHHHHHHhhhcCCCCCCceeeecCCCCEEEeccHHHHhhcccccChHHHHHHHHHHhhhccccC
Q 008712 12 LKRESGTKVHHANIQASKAVADIIRTTLGPRSMLKMLLDASGGIVVTNDGNAILRELDVAHPAAKSMIELSRTQDEEVGD 91 (557)
Q Consensus 12 ~~~~~g~~~~~~~~~~~~~l~~~v~sslGP~G~~k~i~~~~g~~~iTnDG~tIlk~l~~~hP~a~ll~~~~~~~~~~~GD 91 (557)
.+.++|.++|.+|+.||..|+++|+|||||+||+|||+++.|+++|||||+|||++|+++||+|+|++++|++|++++||
T Consensus 3 ~~~~~g~~a~~~ni~a~~~la~~v~ttlGP~G~~kml~~~~g~~~iTnDG~tIlk~i~v~hP~akll~~~a~~qd~e~GD 82 (529)
T 3iyg_A 3 GDRSTGEAIRSQNVMAAASIANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILKLLEVEHPAAKVLCELADLQDKEVGD 82 (529)
T ss_pred cchhchHHHHHHHHHHHHHHHHHHHhccCCCCCeEEEEcCCCCeEEeCCHHHHHHHcccCChHHHHHHHHHHHhhhhhCC
Confidence 46789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ChhHHHHHHHHHHHHHHHHHhcCCChhhHHHHHHHHHHHHHHHHhh-cccccCCCCHHHHHHHHHHHhhcccccchhHHH
Q 008712 92 GTTSVIVLAGEMLHVAEEFIDKNYHPTVICRAYNKALEDAVAVLDK-IAMPIDTNDRATMLGLVKSCIGTKFTSQFGDLI 170 (557)
Q Consensus 92 Gttt~viLa~~Ll~~~~~li~~gi~p~~I~~g~~~a~~~~~~~L~~-~s~~v~~~~~~~l~~ia~t~l~sK~~~~~~~~l 170 (557)
||||++|||++||+++.+++++|+||..|++||++|++.++++|++ ++++++..+++.|.++|+|+++||+.++|+++|
T Consensus 83 GTTtvvvLA~eLL~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~~s~~v~~~~~e~l~~va~tsl~sK~~~~~~~~i 162 (529)
T 3iyg_A 83 GTTSVVIIAAELLKNADELVKQKIHPTSVISGYRLACKEAVRYISENLIINTDELGRDCLINAAKTSMSSKVIGINGDFF 162 (529)
T ss_pred ChhhHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCHHHHHHHHHHHhccCcccccHHHH
Confidence 9999999999999999999999999999999999999999999998 999998767899999999999999999999999
Q ss_pred HHHHHHHHhhcccccCCCccccCcccceEEEEecCCCCCCcEEEEeEEEeccccCCCCCccccCCceEEEEecCCccccc
Q 008712 171 ADLAIDATTTVGVDLGQGLREVDIKKYIKVEKVPGGQLEDSRVLKGVMFNKDVVAPGKMRRKIVNPRIILLDSPLEYKKG 250 (557)
Q Consensus 171 s~li~~a~~~v~~~~~~g~~~~d~~~~I~I~~~~G~~~~ds~li~Giv~~~~~~~~~~~~~~~~n~kIll~~~~Le~~k~ 250 (557)
++++++|+.++++...+|...+|++ +|+|++.+|+++.||++++|++|++++.++ .||++++||||++++++|+++++
T Consensus 163 ~~livdAv~~V~~~~~~g~~~~dv~-~I~I~k~~G~~~~ds~lv~G~v~dk~~~~~-~m~~~ien~kIlll~~~le~~k~ 240 (529)
T 3iyg_A 163 ANLVVDAVLAIKYTDIRGQPRYPVN-SINVLKAHGRSQMESMLINGYALNCVVGSQ-GMPKRIVNAKIACLDFSLQKTKM 240 (529)
T ss_pred HHHHHHHHHHHhhhccCCCcccccc-eEEEEEecCCCccceEEEeeeEEecCcccc-cCCcccCCceEEEecCCcccccc
Confidence 9999999999974322454567775 599999999999999999999999999998 89999999999999999999999
Q ss_pred cccceEEecCHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEeCCCCCHHHHHHHHHcCCeEEecCChhHHHHHHHHhCCe
Q 008712 251 ENQTNAELVKEEDWEVLLKMEEEYIENLCMQILKFKPDLVITEKGLSDLACHYLSKAGVSAIRRLRKTDNNRIAKACGAV 330 (557)
Q Consensus 251 ~~~~~~~i~~~~~l~~~~~~E~~~i~~~l~~i~~~~~~lIi~~~~i~~~al~~L~~~~I~~i~~v~~~~l~~i~~~tG~~ 330 (557)
+.++++.+++++++..+.+.|++++++++++|++.|+||||++++|++.+++||.++||++++++++++|+|||++|||+
T Consensus 241 e~~~~v~i~~~~~~~~i~~~E~~~l~~~v~kI~~~g~nvvi~~~~I~d~al~~L~~~gI~av~~v~k~~leria~~tGa~ 320 (529)
T 3iyg_A 241 KLGVQVVITDPEKLDQIRQRESDITKERIQKILATGANVILTTGGIDDMCLKYFVEAGAMAVRRVLKRDLKRIAKASGAT 320 (529)
T ss_pred cCCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEECCCCCHHHHHHHHHcCCceeccCCHHHHHHHHHHhCCe
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eccCCCCCC------CCCcCCccceEEEEEECCeEEEEEEecCCCCeEEEEEccCCHHHHHHHHHHHHHHHHHHHHHHhC
Q 008712 331 IVNRPDELQ------ESDVGTGAGLFEVKKIGDEFFAFIVDCKDPKACTVLLRGASKDLLNEVERNLQDAMSVARNIIKN 404 (557)
Q Consensus 331 ii~~~~~l~------~~~lG~~~~~v~~~~ig~~~~~~l~~~~~~~~~TIll~G~t~~~l~e~~~~l~dal~~~~~~~~~ 404 (557)
+++++++++ +++||+ |+.|++.++|+++|++|+||+++++|||+|||+|+.+++|.||+++|||+++|+++++
T Consensus 321 iv~~~~~l~~~e~~~~~~LG~-a~~v~~~~ig~~~~~~~~g~~~~~~~TI~lrG~t~~~l~E~er~l~Dal~v~r~~v~~ 399 (529)
T 3iyg_A 321 VLSTLANLEGEETFEASMLGQ-AEEVVQERICDDELILIKNTKARTSASVILRGANDFMCDEMERSLHDALCVVKRVLES 399 (529)
T ss_pred eecchhcccchhccChhhCcc-ceEEEEEEeCCceEEEEEcCCCCceEEEEECCchHHHHHHHHHHHHHHHHHHHHHhhC
Confidence 999987765 578999 9999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcccCCCchHHHHHHHHHhhhccCCCccchHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHhCCC-------Cce
Q 008712 405 PKLVPGGGATELTVSATLKQKSSSIEGIEKWPYEAAAIAFEAIPRTLAQNCGINVIRTMTALQGKHANGE-------NAW 477 (557)
Q Consensus 405 g~vvpGGG~~E~~l~~~L~~~~~~~~~~~~~~~~~~a~aL~~ip~~L~~NaG~d~~~~~~~l~~~~~~~~-------~~~ 477 (557)
|++|||||++|++|+.+|++++.+.++++|+++++|++||+.||++||+|||+|+.+++.+|+..|..++ ..+
T Consensus 400 ~~iVpGGGa~E~~ls~~L~~~~~~~~g~eq~~i~~fa~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~~~~~~~~ 479 (529)
T 3iyg_A 400 KSVVPGGGAVEAALSIYLENYATSMGSREQLAIAEFARSLLVIPNTLAVNAAQDSTDLVAKLRAFHNEAQVNPERKNLKW 479 (529)
T ss_pred CeEEeCCcHHHHHHHHHHHHHhhhcCChHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHhccccccccccCce
Confidence 9999999999999999999999888999999999999999999999999999999999999999997653 157
Q ss_pred eeEeCCCCccccccccccccchHHHHHHHHHHHHHHHHHHhhhHhhcCC
Q 008712 478 IGIDGNTGAISDMKERKIWDAYNVKAQTFKTAIEAACMLLRIDDIVSGI 526 (557)
Q Consensus 478 ~Gid~~~~~i~d~~~~gI~dp~~vk~~~l~~A~e~a~~lL~iD~ii~~~ 526 (557)
+|||+.+|++.||.+.|||||+.||+++|++|+|+|++|||||++|...
T Consensus 480 ~G~d~~~g~~~d~~~~gV~dp~~vk~~al~~A~e~a~~iL~iD~ii~~~ 528 (529)
T 3iyg_A 480 IGLDLVNGKPRDNKQAGVFEPTIVKVKSLKFATEAAITILRIDDLIKLH 528 (529)
T ss_pred eeeeCCCCCccChhhccCEecHHHHHHHHHHHHHHHHHHHhHHhhhcCC
Confidence 9999999999999999999999999999999999999999999999774
No 6
>3iyg_G T-complex protein 1 subunit gamma; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=1.2e-112 Score=918.70 Aligned_cols=514 Identities=63% Similarity=1.020 Sum_probs=494.0
Q ss_pred cccccccHHHHHHHHHHHHHHHHHhhhcCCCCCCceeeecCCCCEEEeccHHHHhhcccccChHHHHHHHHHHhhhcccc
Q 008712 11 SLKRESGTKVHHANIQASKAVADIIRTTLGPRSMLKMLLDASGGIVVTNDGNAILRELDVAHPAAKSMIELSRTQDEEVG 90 (557)
Q Consensus 11 ~~~~~~g~~~~~~~~~~~~~l~~~v~sslGP~G~~k~i~~~~g~~~iTnDG~tIlk~l~~~hP~a~ll~~~~~~~~~~~G 90 (557)
|++.++|.++|.+|+.||+.|+++|||||||+||+|||+++.|+++|||||+|||++|+++||+|+|++++|++||+++|
T Consensus 1 ~~~~~~g~~~~~~ni~a~~~la~~vkttLGP~G~~kml~~~~G~~~iTnDG~tIlk~i~v~hP~Akll~e~a~~qd~e~G 80 (515)
T 3iyg_G 1 NTKRESGRKVQSGNINAAKTIADIIRTCLGPKSMMKMLLDPMGGIVMTNDGNAILREIQVQHPAAKSMIEISRTQDEEVG 80 (515)
T ss_pred CCcccchHHHHHHHHHHHHHHHHHHhcCcCCCCCeEEEECCCCCeEEECCHHHHHHhcccCCHHHHHHHHHHHHhhhhhC
Confidence 35678999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CChhHHHHHHHHHHHHHHHHHhcCCChhhHHHHHHHHHHHHHHHHhhcccccCCCCHHHHHHHHHHHhhcccccchhHHH
Q 008712 91 DGTTSVIVLAGEMLHVAEEFIDKNYHPTVICRAYNKALEDAVAVLDKIAMPIDTNDRATMLGLVKSCIGTKFTSQFGDLI 170 (557)
Q Consensus 91 DGttt~viLa~~Ll~~~~~li~~gi~p~~I~~g~~~a~~~~~~~L~~~s~~v~~~~~~~l~~ia~t~l~sK~~~~~~~~l 170 (557)
|||||+++||++||+++.+++++|+||..|++||++|++.++++|++++++++..+++.|.++|+|++++|..+.|.+++
T Consensus 81 DGTTtvvvLAgeLL~~a~~ll~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~~~~~l~~va~tsl~sK~i~~~~~~~ 160 (515)
T 3iyg_G 81 DGTTSVIILAGEMLSVAEHFLEQQMHPTVVISAYRKALDDMISTLKKISIPVDTSNRDTMLNIINSSITTKVISRWSSLA 160 (515)
T ss_pred CChhhHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhhcccCCCCHHHHHHHHHHHhcCCchhhHHHHH
Confidence 99999999999999999999999999999999999999999999999999998777899999999999999999999999
Q ss_pred HHHHHHHHhhcccccCCCccccCcccceEEEEecCCCCCCcEEEEeEEEeccccCCCCCccccCCceEEEEecCCccccc
Q 008712 171 ADLAIDATTTVGVDLGQGLREVDIKKYIKVEKVPGGQLEDSRVLKGVMFNKDVVAPGKMRRKIVNPRIILLDSPLEYKKG 250 (557)
Q Consensus 171 s~li~~a~~~v~~~~~~g~~~~d~~~~I~I~~~~G~~~~ds~li~Giv~~~~~~~~~~~~~~~~n~kIll~~~~Le~~k~ 250 (557)
++++++|+..+.++. ++..++|++++|+|++++|++++||++++|++|++++.+| .|+++++||||++++++|+++++
T Consensus 161 ~~i~vdav~~V~~~~-~~~~~~dl~~~I~I~ki~Ggs~~ds~lv~G~v~dk~~~~~-~m~~~ien~kIll~~~~Le~~k~ 238 (515)
T 3iyg_G 161 CNIALDAVKTVQFEE-NGRKEIDIKKYARVEKIPGGIIEDSCVLRGVMINKDVTHP-RMRRYIKNPRIVLLDSSLEYKKG 238 (515)
T ss_pred HHHHHHHHHhccccc-CCCcccchhheeEEEEecCCCcccceEEeeEEEeCCCCCC-CCcceeeeeEEEEEccccccccc
Confidence 999999999987422 3334578877799999999999999999999999999999 89999999999999999999999
Q ss_pred cccceEEecCHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEeCCCCCHHHHHHHHHcCCeEEecCChhHHHHHHHHhCCe
Q 008712 251 ENQTNAELVKEEDWEVLLKMEEEYIENLCMQILKFKPDLVITEKGLSDLACHYLSKAGVSAIRRLRKTDNNRIAKACGAV 330 (557)
Q Consensus 251 ~~~~~~~i~~~~~l~~~~~~E~~~i~~~l~~i~~~~~~lIi~~~~i~~~al~~L~~~~I~~i~~v~~~~l~~i~~~tG~~ 330 (557)
++++++.+++++++.++++.|++++++++++|++.|++|||++++|++.+++||.++||++++++++++|+|||++||++
T Consensus 239 e~~~~v~is~~~~l~~~l~~E~~~l~~~v~kI~~~g~~vIi~~~~I~~~al~~L~~~~I~av~~~~k~~leria~~tGa~ 318 (515)
T 3iyg_G 239 ESQTDIEITREEDFTRILQMEEEYIQQLCEDIIQLKPDVVITEKGISDLAQHYLMRANITAIRRVRKTDNNRIARACGAR 318 (515)
T ss_pred ccCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhCCCCEEEECCccCHHHHHHHHHCCceeeccCCHHHHHHHHHHhCCe
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eccCCCCCCCCCcCCccceEEEEEECCeEEEEEEecCCCCeEEEEEccCCHHHHHHHHHHHHHHHHHHHHHHhCCCcccC
Q 008712 331 IVNRPDELQESDVGTGAGLFEVKKIGDEFFAFIVDCKDPKACTVLLRGASKDLLNEVERNLQDAMSVARNIIKNPKLVPG 410 (557)
Q Consensus 331 ii~~~~~l~~~~lG~~~~~v~~~~ig~~~~~~l~~~~~~~~~TIll~G~t~~~l~e~~~~l~dal~~~~~~~~~g~vvpG 410 (557)
++++++++++++||+.|+.|++.++|+++|++|+||++++.|||+|||+|+.+++|.||+++|||+++|++++++++|||
T Consensus 319 ii~~l~~l~~~~LG~~a~~v~~~~~g~~~~~~i~g~~~~~~~TIllrG~t~~~l~E~er~i~Dal~~~r~~~~~~~ivpG 398 (515)
T 3iyg_G 319 IVSRPEELREEDVGTGAGLLEIKKIGDEYFTFITECKDPKACTILLRGASKEILSEVERNLQDAMQVCRNVLLDPQLVPG 398 (515)
T ss_pred eeccccccChhhcCCcccEEEEEEECCceEEEEeCCCCCCeEEEEEcCCCHHHHHHHHHHHHHHHHHHHHHhhCCcEEeC
Confidence 99999999999999769999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCchHHHHHHHHHhhhccCCCccchHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHhCCCCceeeEeCCCCccccc
Q 008712 411 GGATELTVSATLKQKSSSIEGIEKWPYEAAAIAFEAIPRTLAQNCGINVIRTMTALQGKHANGENAWIGIDGNTGAISDM 490 (557)
Q Consensus 411 GG~~E~~l~~~L~~~~~~~~~~~~~~~~~~a~aL~~ip~~L~~NaG~d~~~~~~~l~~~~~~~~~~~~Gid~~~~~i~d~ 490 (557)
||++|++|+.+|++++.+.++++|+++++|++||+.||++|++|||+|+.+++.+|++.|..+.+.++|||+.+|++.||
T Consensus 399 GGa~e~~~~~~L~~~~~~~~g~eq~~i~~~a~Ale~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~~G~d~~~g~~~d~ 478 (515)
T 3iyg_G 399 GGASEMAVAHALTEKSKAMTGVEQWPYRAVAQALEVIPRTLIQNCGASTIRLLTSLRAKHTQENCETWGVNGETGTLVDM 478 (515)
T ss_pred CCHHHHHHHHHHHHHhhccCcHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHhcCCCceeeeCCCCccccc
Confidence 99999999999999998899999999999999999999999999999999999999999976544679999999999999
Q ss_pred cccccccchHHHHHHHHHHHHHHHHHHhhhHhhcCC
Q 008712 491 KERKIWDAYNVKAQTFKTAIEAACMLLRIDDIVSGI 526 (557)
Q Consensus 491 ~~~gI~dp~~vk~~~l~~A~e~a~~lL~iD~ii~~~ 526 (557)
.+.|||||+.||+++|+.|+|+|++|||||++|...
T Consensus 479 ~~~gi~dp~~vk~~al~~A~e~a~~iL~iD~ii~~~ 514 (515)
T 3iyg_G 479 KELGIWEPLAVKLQTYKTAVETAVLLLRIDDIVSGH 514 (515)
T ss_pred HHcCCEEcHHHHHHHHHHHHHHHHHHHHHHheeecC
Confidence 999999999999999999999999999999999753
No 7
>3p9d_G T-complex protein 1 subunit ETA; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_g* 4d8q_G* 4d8r_g*
Probab=100.00 E-value=4.4e-114 Score=934.83 Aligned_cols=525 Identities=31% Similarity=0.544 Sum_probs=491.4
Q ss_pred CCCCcccccccccccccHHHHHHHHHHHHHHHHHhhhcCCCCCCceeeecCCCCEEEeccHHHHhhcccccChHHHHHHH
Q 008712 1 MHSPVLVLKDSLKRESGTKVHHANIQASKAVADIIRTTLGPRSMLKMLLDASGGIVVTNDGNAILRELDVAHPAAKSMIE 80 (557)
Q Consensus 1 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~l~~~v~sslGP~G~~k~i~~~~g~~~iTnDG~tIlk~l~~~hP~a~ll~~ 80 (557)
||+|+.+|+++.+.++|.+++.+|+.||+.|+++|++||||+||+|||+++.|+++|||||+||||+|+++||+|+|+++
T Consensus 6 ~~~~~~~l~~~~~~~~g~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~G~~~ITnDG~TIlk~i~v~hP~Akll~e 85 (550)
T 3p9d_G 6 QTPTIVVLKEGTDASQGKGQIISNINACVAVQEALKPTLGPLGSDILIVTSNQKTTISNDGATILKLLDVVHPAAKTLVD 85 (550)
T ss_dssp ----------CCCEEESHHHHHHHHHHHHHHHTTTGGGSTTTCCCEEEECSSSCEEEECCHHHHTTTSCCCSHHHHHHHH
T ss_pred CCcchhhhcCCcchhhhHHHHHHHHHHHHHHHHHHHhccCCCCCcEEEECCCCCeEEECCHHHHHHHccCCCHHHHHHHH
Confidence 67888999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhhccccCChhHHHHHHHHHHHHHHHHHhcCCChhhHHHHHHHHHHHHHHHHhhcccccCCCC---HHHHHHHHHHH
Q 008712 81 LSRTQDEEVGDGTTSVIVLAGEMLHVAEEFIDKNYHPTVICRAYNKALEDAVAVLDKIAMPIDTND---RATMLGLVKSC 157 (557)
Q Consensus 81 ~~~~~~~~~GDGttt~viLa~~Ll~~~~~li~~gi~p~~I~~g~~~a~~~~~~~L~~~s~~v~~~~---~~~l~~ia~t~ 157 (557)
+|++||+++||||||++|||++||+++.+++++|+||..|++||++|++.++++|++++++++..+ ++.|.++|+|+
T Consensus 86 ~a~~qd~e~GDGTTtvvVLA~~Ll~~a~~lv~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~~~~~~~~L~~vA~ts 165 (550)
T 3p9d_G 86 ISRAQDAEVGDGTTSVTILAGELMKEAKPFLEEGISSHLIMKGYRKAVSLAVEKINELAVDITSEKSSGRELLERCARTA 165 (550)
T ss_dssp HHHHHHTTTSSCHHHHHHHHHHHHHTTSHHHHSSSCTTHHHHHHHHHHHHHHHHHHHSEECCCCC------CHHHHHHHH
T ss_pred HHHHhhhhhCCCceehHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhcccCCCCcchhHHHHHHHHHHh
Confidence 999999999999999999999999999999999999999999999999999999999999987655 77899999999
Q ss_pred hhcccccchhHHHHHHHHHHHhhcccccCCCccccCcccceEEEEecCCCCCCcEEEEeEEEeccccCC--CCCccccCC
Q 008712 158 IGTKFTSQFGDLIADLAIDATTTVGVDLGQGLREVDIKKYIKVEKVPGGQLEDSRVLKGVMFNKDVVAP--GKMRRKIVN 235 (557)
Q Consensus 158 l~sK~~~~~~~~ls~li~~a~~~v~~~~~~g~~~~d~~~~I~I~~~~G~~~~ds~li~Giv~~~~~~~~--~~~~~~~~n 235 (557)
++||+.+.|+++|++++++|+.++++ .++|++ +|.|++++|+++++|++++|++|++++.+| .+||++++|
T Consensus 166 l~sK~~~~~~~~i~~livdAv~~V~~------~~~dl~-~I~Vikv~Gg~~~ds~lv~G~~~dk~~~s~yf~~~~~~~en 238 (550)
T 3p9d_G 166 MSSKLIHNNADFFVKMCVDAVLSLDR------NDLDDK-LIGIKKIPGGAMEESLFINGVAFKKTFSYAGFEQQPKKFNN 238 (550)
T ss_dssp HHHTTTGGGHHHHHHHHHHHHHHCCS------SSCCGG-GCCCCBCCSSCGGGCCCCSSEEECCCSSCTTCSCSCSCCSS
T ss_pred ccCccccccHhHHHHHHHHHHHHhCc------cccCch-heeEEEecCCCccceeEEeeEEEeccccccccccCcccccC
Confidence 99999999999999999999999974 246664 699999999999999999999999999987 378999999
Q ss_pred ceEEEEecCCccccccccceEEecCHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEeCCCCCHHHHHHHHHcCCeEEecC
Q 008712 236 PRIILLDSPLEYKKGENQTNAELVKEEDWEVLLKMEEEYIENLCMQILKFKPDLVITEKGLSDLACHYLSKAGVSAIRRL 315 (557)
Q Consensus 236 ~kIll~~~~Le~~k~~~~~~~~i~~~~~l~~~~~~E~~~i~~~l~~i~~~~~~lIi~~~~i~~~al~~L~~~~I~~i~~v 315 (557)
|||++++++|++++++.++++.+++++++.++++.|++++++++++|++.|++||+++++|++.+++||.++||++++++
T Consensus 239 ~kIll~~~~Le~~k~e~~~~v~is~~~~l~~il~~E~~~l~~~v~~I~~~g~~vVi~~~~I~dla~~~L~~~gI~~v~~v 318 (550)
T 3p9d_G 239 PKILSLNVELELKAEKDNAEVRVEHVEDYQAIVDAEWQLIFEKLRQVEETGANIVLSKLPIGDLATQFFADRNIFCAGRV 318 (550)
T ss_dssp CCEEEECSCCSCCCCSSCEEEEECSSSHHHHHHHHHHHHHHHHHHHHHTTTCSEEEESSCCCHHHHHTTGGGTCEEEECC
T ss_pred ceEEEeccccccccccccceeeeCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEECCCccHHHHHHHHHcCCccccCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ChhHHHHHHHHhCCeeccCCCCCCCCCcCCccceEEEEEECCeEEEEEEecCCCCeEEEEEccCCHHHHHHHHHHHHHHH
Q 008712 316 RKTDNNRIAKACGAVIVNRPDELQESDVGTGAGLFEVKKIGDEFFAFIVDCKDPKACTVLLRGASKDLLNEVERNLQDAM 395 (557)
Q Consensus 316 ~~~~l~~i~~~tG~~ii~~~~~l~~~~lG~~~~~v~~~~ig~~~~~~l~~~~~~~~~TIll~G~t~~~l~e~~~~l~dal 395 (557)
++++|+||+++||+++++++++++++++|+ |+.|++.++|+++|++|+||+++++|||+|||+|+.+++|+||+++|||
T Consensus 319 ~k~~lerIa~~tGa~iis~l~~l~~~~LG~-a~~v~~~~ig~e~~~~~~g~~~~~~~tI~lrG~te~~l~E~kr~l~DAl 397 (550)
T 3p9d_G 319 SADDMNRVIQAVGGSIQSTTSDIKPEHLGT-CALFEEMQIGSERYNLFQGCPQAKTCTLLLRGGAEQVIAEVERSLHDAI 397 (550)
T ss_dssp CTTHHHHHHHHTCCCCBSSGGGCCGGGCCC-CSBCCCCCCSSSCCEEEBCCTTCCCCCCCBCSSSHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHhCCceecchhhCCHHHcCC-ceEEEEEEeCCeEEEEEecCCCCceeEEEEeCCcHHHHHHHHHHHHhHH
Confidence 999999999999999999999999999999 9999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhCCCcccCCCchHHHHHHHHHhhhccCCCccchHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHhCCCC
Q 008712 396 SVARNIIKNPKLVPGGGATELTVSATLKQKSSSIEGIEKWPYEAAAIAFEAIPRTLAQNCGINVIRTMTALQGKHANGEN 475 (557)
Q Consensus 396 ~~~~~~~~~g~vvpGGG~~E~~l~~~L~~~~~~~~~~~~~~~~~~a~aL~~ip~~L~~NaG~d~~~~~~~l~~~~~~~~~ 475 (557)
+++|+++++|++|||||++|++|+.+|++++.+.++++|+++++|++||+.||++|++|||+|+.+++.+|+..|..++
T Consensus 398 ~~~r~av~~g~iVpGGGa~e~~~s~~L~~~~~~~~g~eq~~i~~~a~ALe~ip~~La~NaG~d~~~vv~~l~~~h~~~~- 476 (550)
T 3p9d_G 398 MIVKRALQNKLIVAGGGATEMEVSKCLRDYSKTIAGKQQMIINAFAKALEVIPRQLCENAGFDAIEILNKLRLAHSKGE- 476 (550)
T ss_dssp HHHHHHHHSCCEEETTTHHHHHHHHHHHHHHHTCCSTTHHHHHHHHHHHTHHHHHHHHTSCSCHHHHHHHHHHHHHHSC-
T ss_pred HHHHHHHhcCCcccCCCHHHHHHHHHHHHHhhcCChHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHhcCC-
Confidence 9999999999999999999999999999998888999999999999999999999999999999999999999987664
Q ss_pred ceeeEeCCCCccccccccccccchHHHHHHHHHHHHHHHHHHhhhHhhcCCccCCCCCC
Q 008712 476 AWIGIDGNTGAISDMKERKIWDAYNVKAQTFKTAIEAACMLLRIDDIVSGIKKKQAPGS 534 (557)
Q Consensus 476 ~~~Gid~~~~~i~d~~~~gI~dp~~vk~~~l~~A~e~a~~lL~iD~ii~~~~~~~~~~~ 534 (557)
+++|||+.+|++.||++.|||||+.||+++|+.|+|+|++|||||++|...|++.++++
T Consensus 477 ~~~G~d~~~g~~~dm~~~gI~dp~~vk~~al~~A~~~a~~iL~id~ii~~~~~~~~~~~ 535 (550)
T 3p9d_G 477 KWYGVVFETENIGDNFAKFVWEPALVKINALNSATEATNLILSVDETITNKGSESANAG 535 (550)
T ss_dssp SCCCBCSSSSSBCCHHHHTCEEEHHHHHHHHHHHHHHHHHHHTEEEEECCCCCC-----
T ss_pred CceeeeCCCCcccchHhccCEecHHHHHHHHHHHHHHHHHHHhHHHHhhCCCcccccCC
Confidence 68999999999999999999999999999999999999999999999998887665544
No 8
>1a6d_A Thermosome (alpha subunit); group II chaperonin, CCT, TRIC, PR folding, ATPase, chaperonin; 2.60A {Thermoplasma acidophilum} SCOP: a.129.1.2 c.8.5.2 d.56.1.2 PDB: 1a6e_A*
Probab=100.00 E-value=1.5e-112 Score=922.88 Aligned_cols=519 Identities=39% Similarity=0.645 Sum_probs=487.9
Q ss_pred CcccccccccccccHHHHHHHHHHHHHHHHHhhhcCCCCCCceeeecCCCCEEEeccHHHHhhcccccChHHHHHHHHHH
Q 008712 4 PVLVLKDSLKRESGTKVHHANIQASKAVADIIRTTLGPRSMLKMLLDASGGIVVTNDGNAILRELDVAHPAAKSMIELSR 83 (557)
Q Consensus 4 ~~~~~~~~~~~~~g~~~~~~~~~~~~~l~~~v~sslGP~G~~k~i~~~~g~~~iTnDG~tIlk~l~~~hP~a~ll~~~~~ 83 (557)
|..+++++.+..+|.++|.+|+.||..|+++|+|||||+||+|||+++.|+++|||||+||||+|+++||+|+|++++|+
T Consensus 7 ~~~~l~~~~~~~~g~~a~~~ni~a~~~la~~vkttLGP~G~~kml~~~~G~~~iTnDG~tIlk~i~v~hP~Akll~e~a~ 86 (545)
T 1a6d_A 7 PILVLKEGTQREQGKNAQRNNIEAAKAIADAVRTTLGPKGMDKMLVDSIGDIIISNDGATILKEMDVEHPTAKMIVEVSK 86 (545)
T ss_dssp ----------CEEHHHHHHHHHHHHHHHHHHHHTTCSTTCCEEEEECSSSCEEEECCHHHHHHHSCCCSHHHHHHHGGGG
T ss_pred cccccCCcchhhchHHHHHHHHHHHHHHHHHHHhccCCCCCeEEEEcCCCCeEEeCcHHHHHHhhhccchHHHHHHHHHH
Confidence 67788999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhccccCChhHHHHHHHHHHHHHHHHHhcCCChhhHHHHHHHHHHHHHHHHhhcccccCCCCHHHHHHHHHHHhhcccc
Q 008712 84 TQDEEVGDGTTSVIVLAGEMLHVAEEFIDKNYHPTVICRAYNKALEDAVAVLDKIAMPIDTNDRATMLGLVKSCIGTKFT 163 (557)
Q Consensus 84 ~~~~~~GDGttt~viLa~~Ll~~~~~li~~gi~p~~I~~g~~~a~~~~~~~L~~~s~~v~~~~~~~l~~ia~t~l~sK~~ 163 (557)
+|++++||||||+++||++||+++.+++++|+||..|++||++|++.++++|++++++ + .+++.|.++++|+|+||+.
T Consensus 87 ~qd~e~GDGTTtvvvLA~~LL~~a~~ll~~GihP~~I~~G~~~A~~~a~~~L~~~s~~-~-~~~~~l~~va~tsl~sKi~ 164 (545)
T 1a6d_A 87 AQDTAVGDGTTTAVVLSGELLKQAETLLDQGVHPTVISNGYRLAVNEARKIIDEIAEK-S-TDDATLRKIALTALSGKNT 164 (545)
T ss_dssp CTTTCSTTHHHHHHHHHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHCEE-C-CCHHHHHHHHHHHTTTSSC
T ss_pred hcCCEECCChhHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhcCC-C-CCHHHHHHHHHHHHhcccc
Confidence 9999999999999999999999999999999999999999999999999999999999 6 5789999999999999999
Q ss_pred cchhHHHHHHHHHHHhhcccccCCCccccCcccceEEEEecCCCCCCcEEEEeEEEeccccCCCCCccccCCceEEEEec
Q 008712 164 SQFGDLIADLAIDATTTVGVDLGQGLREVDIKKYIKVEKVPGGQLEDSRVLKGVMFNKDVVAPGKMRRKIVNPRIILLDS 243 (557)
Q Consensus 164 ~~~~~~ls~li~~a~~~v~~~~~~g~~~~d~~~~I~I~~~~G~~~~ds~li~Giv~~~~~~~~~~~~~~~~n~kIll~~~ 243 (557)
++|+++|++++++|+.+++++. .|..++|++ +|+|++++|+++++|++++|++|++++.++ .||++++||||+++++
T Consensus 165 ~~~~~~i~~livdAv~~v~~~~-~g~~~~d~~-~I~V~k~~G~~~~ds~lv~G~v~dk~~~~~-~m~~~ien~kIll~~~ 241 (545)
T 1a6d_A 165 GLSNDFLADLVVKAVNAVAEVR-DGKTIVDTA-NIKVDKKNGGSVNDTQFISGIVIDKEKVHS-KMPDVVKNAKIALIDS 241 (545)
T ss_dssp CSTHHHHHHHHHHHHHHHCEES-SSSEECCGG-GEEEEECCCSCSTTCEEESEEEESCCCSCT-TSCSEEEEEEEEEECS
T ss_pred cccHHHHHHHHHHHHHHHhccc-CCCcccccc-eEEEEEecCCCceeeEEEeeEEEeccCCCC-CCcceecCCEEEEEec
Confidence 9999999999999999998632 233457764 799999999999999999999999999999 8999999999999999
Q ss_pred CCccccccccceEEecCHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEeCCCCCHHHHHHHHHcCCeEEecCChhHHHHH
Q 008712 244 PLEYKKGENQTNAELVKEEDWEVLLKMEEEYIENLCMQILKFKPDLVITEKGLSDLACHYLSKAGVSAIRRLRKTDNNRI 323 (557)
Q Consensus 244 ~Le~~k~~~~~~~~i~~~~~l~~~~~~E~~~i~~~l~~i~~~~~~lIi~~~~i~~~al~~L~~~~I~~i~~v~~~~l~~i 323 (557)
+|++++++.++++.++++++++.++++|+++++++++++++.|++|||++++|++++++||.++||++++++++++|+||
T Consensus 242 ~Le~~k~e~~~~v~i~~~~~l~~~~~~E~~~l~~~le~I~~~g~~lvi~~~~I~~~al~~L~~~~I~av~~~~k~~le~i 321 (545)
T 1a6d_A 242 ALEIKKTEIEAKVQISDPSKIQDFLNQETNTFKQMVEKIKKSGANVVLCQKGIDDVAQHYLAKEGIYAVRRVKKSDMEKL 321 (545)
T ss_dssp CBSCCCCSSCCEEEECSTTHHHHHHHHHHHHHHHHHHHHHHTTCCEEEESSCBCHHHHHHHHHHTCEEECSCCHHHHHHH
T ss_pred CCCcccccCCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEECCCccHHHHHHHHHCCeeEeccCCHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhCCeeccCCCCCCCCCcCCccceEEEEEECCeEEEEEEecCCCCeEEEEEccCCHHHHHHHHHHHHHHHHHHHHHHh
Q 008712 324 AKACGAVIVNRPDELQESDVGTGAGLFEVKKIGDEFFAFIVDCKDPKACTVLLRGASKDLLNEVERNLQDAMSVARNIIK 403 (557)
Q Consensus 324 ~~~tG~~ii~~~~~l~~~~lG~~~~~v~~~~ig~~~~~~l~~~~~~~~~TIll~G~t~~~l~e~~~~l~dal~~~~~~~~ 403 (557)
|++||++++++++++++++||+ |+.|++.++|+++|++|++|.++++|||+|||+|+.+++|.||+++|||+++|++++
T Consensus 322 a~~tGa~iis~l~~~~~~~LG~-a~~v~~~~ig~~~~~~~~g~~~~~~~TI~lrG~te~~l~E~kr~l~DAl~~~r~a~~ 400 (545)
T 1a6d_A 322 AKATGAKIVTDLDDLTPSVLGE-AETVEERKIGDDRMTFVMGCKNPKAVSILIRGGTDHVVSEVERALNDAIRVVAITKE 400 (545)
T ss_dssp HHHHCCCEESSGGGCCGGGCEE-EEEEEEEEETTEEEEEEEEESCSSCEEEEECCSSSTTHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHhCCeeecccccCCHHHCCC-ceEEEEEEecCceEEEEecCCCCceEEEEEcCCCHHHHHHHHHHHHHHHHHHHHHHh
Confidence 9999999999999999999999 999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCcccCCCchHHHHHHHHHhhhccCCCccchHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHhCCCCceeeEeCC
Q 008712 404 NPKLVPGGGATELTVSATLKQKSSSIEGIEKWPYEAAAIAFEAIPRTLAQNCGINVIRTMTALQGKHANGENAWIGIDGN 483 (557)
Q Consensus 404 ~g~vvpGGG~~E~~l~~~L~~~~~~~~~~~~~~~~~~a~aL~~ip~~L~~NaG~d~~~~~~~l~~~~~~~~~~~~Gid~~ 483 (557)
+|++|||||++|++|+.+|++++.+.++++|+++++|++||+.||++|++|||+|+.+++.+|+..|..++ .++|||+.
T Consensus 401 ~g~iVpGGGa~e~~~~~~L~~~~~~~~g~~q~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~-~~~G~d~~ 479 (545)
T 1a6d_A 401 DGKFLWGGGAVEAELAMRLAKYANSVGGREQLAIEAFAKALEIIPRTLAENAGIDPINTLIKLKADDEKGR-ISVGVDLD 479 (545)
T ss_dssp HCEEEETTTHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHTHHHHHHHHHHTSCHHHHHHHHHHHHHTTC-TTEEEETT
T ss_pred CCCEEeCcCHHHHHHHHHHHHHhhccCccHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHhhcCC-CCcceecc
Confidence 99999999999999999999999888899999999999999999999999999999999999999997654 67999999
Q ss_pred CCccccccccccccchHHHHHHHHHHHHHHHHHHhhhHhhcCCccC
Q 008712 484 TGAISDMKERKIWDAYNVKAQTFKTAIEAACMLLRIDDIVSGIKKK 529 (557)
Q Consensus 484 ~~~i~d~~~~gI~dp~~vk~~~l~~A~e~a~~lL~iD~ii~~~~~~ 529 (557)
+|++.||.+.|||||+.||+++|+.|+|+|++|||||++|...|++
T Consensus 480 ~g~~~d~~~~gI~dp~~vk~~al~~A~e~a~~iL~id~iI~~~~~~ 525 (545)
T 1a6d_A 480 NNGVGDMKAKGVVDPLRVKTHALESAVEVATMILRIDDVIASKKST 525 (545)
T ss_dssp TTEEEEHHHHTCEEEHHHHHHHHHHHHHHHHHHHTCCEEC------
T ss_pred cCccccchhcCccccHHHHHHHHHHHHHHHHHHHHHHHHHhcccCC
Confidence 9999999999999999999999999999999999999999987765
No 9
>3p9d_A T-complex protein 1 subunit alpha; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_a* 4d8q_A* 4d8r_a*
Probab=100.00 E-value=2e-112 Score=923.43 Aligned_cols=527 Identities=29% Similarity=0.447 Sum_probs=499.6
Q ss_pred ccccccccccccHHHHHHHHHHHHHHHHHhhhcCCCCCCceeeecCCCCEEEeccHHHHhhcccccChHHHHHHHHHHhh
Q 008712 6 LVLKDSLKRESGTKVHHANIQASKAVADIIRTTLGPRSMLKMLLDASGGIVVTNDGNAILRELDVAHPAAKSMIELSRTQ 85 (557)
Q Consensus 6 ~~~~~~~~~~~g~~~~~~~~~~~~~l~~~v~sslGP~G~~k~i~~~~g~~~iTnDG~tIlk~l~~~hP~a~ll~~~~~~~ 85 (557)
.-++++.+..+|.++|.+|+.||..|+++|+|||||+||+|||+++.|+++|||||+|||++|+++||+|+|++++|++|
T Consensus 11 ~~~~~~~~~~~g~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~G~~~iTnDG~tIlk~i~v~hP~Akll~e~a~~q 90 (559)
T 3p9d_A 11 DTLFLGGEKISGDDIRNQNVLATMAVANVVKSSLGPVGLDKMLVDDIGDFTVTNDGATILSLLDVQHPAGKILVELAQQQ 90 (559)
T ss_dssp CSCCSSCEEEETHHHHHHHHHHHHHHHHHTTTTSSTTCCEEEECCSSSCCCEECCHHHHHHHHCCCSHHHHHHHHHHHHH
T ss_pred chhhccccccchHHHHHHHHHHHHHHHHHHHhccCCCCCeeEeEcCCCCEEEECCHHHHHHHhcCCCHHHHHHHHHHHHH
Confidence 44688889999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hccccCChhHHHHHHHHHHHHHHHHHhcCCChhhHHHHHHHHHHHHHHHHhh-cccccCCCCHHHHHHHHHHHhhccccc
Q 008712 86 DEEVGDGTTSVIVLAGEMLHVAEEFIDKNYHPTVICRAYNKALEDAVAVLDK-IAMPIDTNDRATMLGLVKSCIGTKFTS 164 (557)
Q Consensus 86 ~~~~GDGttt~viLa~~Ll~~~~~li~~gi~p~~I~~g~~~a~~~~~~~L~~-~s~~v~~~~~~~l~~ia~t~l~sK~~~ 164 (557)
++++||||||++|||++||+++.+++++|+||..|++||++|++.++++|++ ++++++..+++.|.++|+|+++||+.+
T Consensus 91 d~e~GDGTTtvvVLA~~LL~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~~s~~v~~~~~e~L~~vA~tsl~sK~~~ 170 (559)
T 3p9d_A 91 DREIGDGTTSVVIIASELLKRANELVKNKIHPTTIITGFRVALREAIRFINEVLSTSVDTLGKETLINIAKTSMSSKIIG 170 (559)
T ss_dssp HHHTSSCHHHHHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHHHTGGGSCC--CTTHHHHHHHTTSSSGGG
T ss_pred HHHcCCCcchHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCHHHHHHHHHHHhccCccc
Confidence 9999999999999999999999999999999999999999999999999999 999998756788999999999999999
Q ss_pred chhHHHHHHHHHHHhhcccccCCCccccCcccceEEEEecCCCCCCcEEEEeEEEeccccCCCCCccccC--CceEEEEe
Q 008712 165 QFGDLIADLAIDATTTVGVDLGQGLREVDIKKYIKVEKVPGGQLEDSRVLKGVMFNKDVVAPGKMRRKIV--NPRIILLD 242 (557)
Q Consensus 165 ~~~~~ls~li~~a~~~v~~~~~~g~~~~d~~~~I~I~~~~G~~~~ds~li~Giv~~~~~~~~~~~~~~~~--n~kIll~~ 242 (557)
+|+++|++++++|+.++++...++...+|++ +|+|++++|+++++|++++|++|++++.++ .|+++++ ||||++++
T Consensus 171 ~~~~~i~~livdAv~~V~~~~~~~~~~i~l~-~I~I~k~~Ggs~~ds~lv~G~v~dk~~~~~-~m~~~ie~~n~kIll~~ 248 (559)
T 3p9d_A 171 ADSDFFSNMVVDALLAVKTQNSKGEIKYPVK-AVNVLKAHGKSATESLLVPGYALNCTVASQ-AMPKRIAGGNVKIACLD 248 (559)
T ss_dssp TTHHHHHHHHHHHHHHHCCEESSSCEECCTT-CCCEEEEESSCSSCCBCCSEECCCCCCSST-TSCSEECSSSBCEEEET
T ss_pred chhHHHHHHHHHHHHHhcccccCCCCccchh-HeEEEEecCCCccceeEeccEEEeecccCC-CcceeeccCCceEEEEe
Confidence 9999999999999999984111222357776 499999999999999999999999999999 8999999 99999999
Q ss_pred cCCccccccccceEEecCHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEeCCCCCHHHHHHHHHcCCeEEecCChhHHHH
Q 008712 243 SPLEYKKGENQTNAELVKEEDWEVLLKMEEEYIENLCMQILKFKPDLVITEKGLSDLACHYLSKAGVSAIRRLRKTDNNR 322 (557)
Q Consensus 243 ~~Le~~k~~~~~~~~i~~~~~l~~~~~~E~~~i~~~l~~i~~~~~~lIi~~~~i~~~al~~L~~~~I~~i~~v~~~~l~~ 322 (557)
++|++++++.++++.+++++++..+.++|++++++++++|++.|++|||++++|++++++||.++||++++++++.+|+|
T Consensus 249 ~~Le~~k~e~~~~v~is~~~~l~~i~~~E~~~l~~~le~I~~~g~~lvI~~~~I~~~al~~L~~~~I~av~~~~k~~le~ 328 (559)
T 3p9d_A 249 LNLQKARMAMGVQINIDDPEQLEQIRKREAGIVLERVKKIIDAGAQVVLTTKGIDDLCLKEFVEAKIMGVRRCKKEDLRR 328 (559)
T ss_dssp TCCSCCCCCTTCCEEECSSSCHHHHHHHHHHHHHHHHHHHHTTCCSEEEESSCCCGGGTHHHHHTTCEEESSCCHHHHHH
T ss_pred ccccccccccCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhhCCCEEEEcCCCCHHHHHHHHHcCCceEccCCHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhCCeeccCC------CCCCCCCcCCccceEEEEEECCeEEEEEEecCCCCeEEEEEccCCHHHHHHHHHHHHHHHH
Q 008712 323 IAKACGAVIVNRP------DELQESDVGTGAGLFEVKKIGDEFFAFIVDCKDPKACTVLLRGASKDLLNEVERNLQDAMS 396 (557)
Q Consensus 323 i~~~tG~~ii~~~------~~l~~~~lG~~~~~v~~~~ig~~~~~~l~~~~~~~~~TIll~G~t~~~l~e~~~~l~dal~ 396 (557)
||++||+++++++ +++++++||+ |+.|++.++|+++|++|+||.++++|||+|||+|+.+++|+||+++|||+
T Consensus 329 ia~~TGa~iis~~~~l~~~e~~~~~~LG~-a~~v~~~~ig~~~~~~~~g~~~~~~~tI~lrG~te~~l~E~kr~l~DAL~ 407 (559)
T 3p9d_A 329 IARATGATLVSSMSNLEGEETFESSYLGL-CDEVVQAKFSDDECILIKGTSKHSSSSIILRGANDYSLDEMERSLHDSLS 407 (559)
T ss_dssp HHHHSSCCCBCCSCCSTTCCCCCTTTSCC-EEEEEEEECSSCEEECEEEESSSCCCCEEEEESCHHHHHHHHHHHHHHHH
T ss_pred HHHHhCCEEEeccccccccccCCHhHCcc-ceEEEEEEEcCceEEEEEcCCCCCEEEEEEcCCCHHHHHHHHHHHHHHHH
Confidence 9999999999998 7899999999 99999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhCCCcccCCCchHHHHHHHHHhhhccCCCccchHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHhCCCCc
Q 008712 397 VARNIIKNPKLVPGGGATELTVSATLKQKSSSIEGIEKWPYEAAAIAFEAIPRTLAQNCGINVIRTMTALQGKHANGENA 476 (557)
Q Consensus 397 ~~~~~~~~g~vvpGGG~~E~~l~~~L~~~~~~~~~~~~~~~~~~a~aL~~ip~~L~~NaG~d~~~~~~~l~~~~~~~~~~ 476 (557)
++|+++++|++|||||++|++|+.+|++++.+.++++|+++++|++||+.||++|++|||+|+.+++.+|+..|..++.+
T Consensus 408 ~~r~av~~g~iVpGGGa~e~~~s~~L~~~~~~~~g~eq~~i~~~a~ALe~ip~~La~NaG~d~~~vv~~l~~~h~~~~~~ 487 (559)
T 3p9d_A 408 VVKRTLESGNVVPGGGCVEAALNIYLDNFATTVGSREQLAIAEFAAALLIIPKTLAVNAAKDSSELVAKLRSYHAASQMA 487 (559)
T ss_dssp HHHHHHTSSCEECTTTTHHHHHHHHHHHHHTTSCTTHHHHHHHHHHHHHHHHHHHHHTSSSCCHHHHHHHHHHHHTTSCC
T ss_pred HHHHHhhcCCEEeCccHHHHHHHHHHHHHhcccChHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHhccccc
Confidence 99999999999999999999999999999988899999999999999999999999999999999999999998765421
Q ss_pred -----------eeeEeCCCCccccccccccccchHHHHHHHHHHHHHHHHHHhhhHhhcCCccCCCCCCC
Q 008712 477 -----------WIGIDGNTGAISDMKERKIWDAYNVKAQTFKTAIEAACMLLRIDDIVSGIKKKQAPGSG 535 (557)
Q Consensus 477 -----------~~Gid~~~~~i~d~~~~gI~dp~~vk~~~l~~A~e~a~~lL~iD~ii~~~~~~~~~~~~ 535 (557)
++|||+.+|++.||++.|||||+.||+++|+.|+|+|++|||||++|...|++.++++|
T Consensus 488 ~~~~~~~~~~~~~G~d~~~g~~~dm~~~gI~dp~~vk~~al~~A~e~a~~iL~id~ii~~~~~~~~~~~~ 557 (559)
T 3p9d_A 488 KPEDVKRRSYRNYGLDLIRGKIVDEIHAGVLEPTISKVKSLKSALEACVAILRIDTMITVDPEPPKEDPH 557 (559)
T ss_dssp C----CCCCCCCEEECTTSSSEEESTTSSCCEEHHHHHHHHHHHHHHHHHHHTEEEEEECCCCCCCCCCC
T ss_pred cccccccccccceeEECCCCcEeehhhccCEecHHHHHHHHHHHHHHHHHHHhHHhhhhcCCcccccCCC
Confidence 79999999999999999999999999999999999999999999999988876655443
No 10
>3iyg_H T-complex protein 1 subunit ETA; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=2e-111 Score=908.31 Aligned_cols=508 Identities=33% Similarity=0.573 Sum_probs=488.3
Q ss_pred cccccccccHHHHHHHHHHHHHHHHHhhhcCCCCCCceeeecCCCCEEEeccHHHHhhcccccChHHHHHHHHHHhhhcc
Q 008712 9 KDSLKRESGTKVHHANIQASKAVADIIRTTLGPRSMLKMLLDASGGIVVTNDGNAILRELDVAHPAAKSMIELSRTQDEE 88 (557)
Q Consensus 9 ~~~~~~~~g~~~~~~~~~~~~~l~~~v~sslGP~G~~k~i~~~~g~~~iTnDG~tIlk~l~~~hP~a~ll~~~~~~~~~~ 88 (557)
++|++.++|.+++.+|+.||+.|+++|+|||||+||+|||+++.|+++|||||+|||++|+++||+|+|++++|++|+++
T Consensus 1 ~~~~~~~~g~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~G~~~iTnDG~tIlk~i~v~hP~Akll~e~a~~qd~~ 80 (515)
T 3iyg_H 1 KEGTDSSQGIPQLVSNISACQVIAEAVRTTLGPRGMDKLIVDGRGKATISNDGATILKLLDVVHPAAKTLVDIAKSQDAE 80 (515)
T ss_pred CCCccccCcHHHHHHHHHHHHHHHHHHhhCcCCCCCeEEEECCCCCeEEECCHHHHHHHccCCCHHHHHHHHHHHHhhce
Confidence 46788899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCChhHHHHHHHHHHHHHHHHHhcCCChhhHHHHHHHHHHHHHHHHhhcccccCCCC----HHHHHHHHHHHhhccccc
Q 008712 89 VGDGTTSVIVLAGEMLHVAEEFIDKNYHPTVICRAYNKALEDAVAVLDKIAMPIDTND----RATMLGLVKSCIGTKFTS 164 (557)
Q Consensus 89 ~GDGttt~viLa~~Ll~~~~~li~~gi~p~~I~~g~~~a~~~~~~~L~~~s~~v~~~~----~~~l~~ia~t~l~sK~~~ 164 (557)
+||||||++|||++||+++.+++++|+||..|++||++|++.++++|++++++++..+ ++.|.++|+|+++||+.+
T Consensus 81 ~GDGTTtvvVLA~~Ll~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~a~~v~~~~~~~~~~~L~~va~tsl~sK~~s 160 (515)
T 3iyg_H 81 VGDGTTSVTLLAAEFLKQVKPYVEEGLHPQIIIRAFRTATQLAVNKIKEIAVTVKKEDKVEQRKLLEKCAMTALSSKLIS 160 (515)
T ss_pred eCcchhhHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhhcccccCChHHHHHHHHHHHHHHhcCCccc
Confidence 9999999999999999999999999999999999999999999999999999996444 677899999999999999
Q ss_pred chhHHHHHHHHHHHhhcccccCCCccccCcccceEEEEecCCCCCCcEEEEeEEEeccccCCC--CCccccCCceEEEEe
Q 008712 165 QFGDLIADLAIDATTTVGVDLGQGLREVDIKKYIKVEKVPGGQLEDSRVLKGVMFNKDVVAPG--KMRRKIVNPRIILLD 242 (557)
Q Consensus 165 ~~~~~ls~li~~a~~~v~~~~~~g~~~~d~~~~I~I~~~~G~~~~ds~li~Giv~~~~~~~~~--~~~~~~~n~kIll~~ 242 (557)
.|+++|++++++|+.+++. ++|+. +|+|++++|++..+|++++|++|++++.||. +||++++||||++++
T Consensus 161 ~~~~~i~~livdAv~~V~~-------~~d~~-~I~V~k~~Gg~~~ds~lv~G~~~dk~~~~p~~~~~p~~~en~kIll~~ 232 (515)
T 3iyg_H 161 QQKAFFAKMVVDAVMMLDD-------LLQLK-MIGIKKVQGGALEESQLVAGVAFKKTFSYAGFEMQPKKYHNPMIALLN 232 (515)
T ss_pred ccHHHHHHHHHHHHHHhcc-------cCCcc-eEEEEecCCCCccceEEEeeeEEecCccCcccccCCccccccEEEEEc
Confidence 9999999999999999963 34553 6999999999999999999999999999983 358899999999999
Q ss_pred cCCccccccccceEEecCHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEeCCCCCHHHHHHHHHcCCeEEecCChhHHHH
Q 008712 243 SPLEYKKGENQTNAELVKEEDWEVLLKMEEEYIENLCMQILKFKPDLVITEKGLSDLACHYLSKAGVSAIRRLRKTDNNR 322 (557)
Q Consensus 243 ~~Le~~k~~~~~~~~i~~~~~l~~~~~~E~~~i~~~l~~i~~~~~~lIi~~~~i~~~al~~L~~~~I~~i~~v~~~~l~~ 322 (557)
++|+++++++++++.+++++++.++++.|+++++++++++.+.|++|||++++|++.+++||.++||++++++++.+|+|
T Consensus 233 ~~Le~~k~e~~~~v~is~~~~l~~~~~~E~~~l~~~le~I~~~g~~vvi~~~~I~dla~~~l~~~gI~~v~~~~k~~ler 312 (515)
T 3iyg_H 233 VELELKAEKDNAEIRVHTVEDYQAIVDAEWNILYDKLEKIHHSGAKVVLSKLPIGDVATQYFADRDMFCAGRVPEEDLKR 312 (515)
T ss_pred ccccccccccCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEECCcccHHHHHHHHHcCCcccccccHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhCCeeccCCCCCCCCCcCCccceEEEEEECCeEEEEEEecCCCCeEEEEEccCCHHHHHHHHHHHHHHHHHHHHHH
Q 008712 323 IAKACGAVIVNRPDELQESDVGTGAGLFEVKKIGDEFFAFIVDCKDPKACTVLLRGASKDLLNEVERNLQDAMSVARNII 402 (557)
Q Consensus 323 i~~~tG~~ii~~~~~l~~~~lG~~~~~v~~~~ig~~~~~~l~~~~~~~~~TIll~G~t~~~l~e~~~~l~dal~~~~~~~ 402 (557)
||++||++++++++++++++||+ |+.|++.++|+++|++|++|.+++.|||+|||+|+.+++|+||+++|||+++|+++
T Consensus 313 ia~~tGa~ii~~l~~~~~~~LG~-a~~v~~~~ig~~~~~~i~g~~~~~~~tI~lrG~t~~~l~E~kr~i~DAl~~~r~~v 391 (515)
T 3iyg_H 313 TMMACGGSIQTSVNALSSDVLGR-CQVFEETQIGGERYNFFTGCPKAKTCTIILRGGAEQFMEETERSLHDAIMIVRRAI 391 (515)
T ss_pred HHHHhCCEEeeccccCCHHHCCc-ccEEEEEEEcCeEEEEEecCCCCceEEEEEeCCcHHHHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999999999 99999999999999999999999999999999999999999999999999999999
Q ss_pred hCCCcccCCCchHHHHHHHHHhhhccCCCccchHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHhCCCCceeeEeC
Q 008712 403 KNPKLVPGGGATELTVSATLKQKSSSIEGIEKWPYEAAAIAFEAIPRTLAQNCGINVIRTMTALQGKHANGENAWIGIDG 482 (557)
Q Consensus 403 ~~g~vvpGGG~~E~~l~~~L~~~~~~~~~~~~~~~~~~a~aL~~ip~~L~~NaG~d~~~~~~~l~~~~~~~~~~~~Gid~ 482 (557)
+++++|||||++|++++.+|++++.+.++++|+++++|++||+.||++|++|||+|+.+++.+|+..|..++ .++|||+
T Consensus 392 ~~~~iVpGGGa~e~~~s~~L~~~~~~~~g~eq~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~-~~~G~d~ 470 (515)
T 3iyg_H 392 KNDSVVAGGGAIEMELSKYLRDYSRTIPGKQQLLIGAYAKALEIIPRQLCDNAGFDATNILNKLRARHAQGG-MWYGVDI 470 (515)
T ss_pred hCCCeecCCcHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHhhccC-CCeeEeC
Confidence 998899999999999999999999888999999999999999999999999999999999999999997765 6799999
Q ss_pred CCCccccccccccccchHHHHHHHHHHHHHHHHHHhhhHhhcCC
Q 008712 483 NTGAISDMKERKIWDAYNVKAQTFKTAIEAACMLLRIDDIVSGI 526 (557)
Q Consensus 483 ~~~~i~d~~~~gI~dp~~vk~~~l~~A~e~a~~lL~iD~ii~~~ 526 (557)
.+|++.||.+.|||||+.||+++|+.|+|+|++|||||++|...
T Consensus 471 ~~g~~~dm~~~gI~dp~~vk~~al~~A~~~a~~iL~iD~ii~~~ 514 (515)
T 3iyg_H 471 NTEDIADNFEAFVWEPAMVRINALTAASEAACLIVSVDETIKNP 514 (515)
T ss_pred CCCcccccHhccCEECHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 99999999999999999999999999999999999999999753
No 11
>3iyg_B T-complex protein 1 subunit beta; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus} PDB: 3ktt_B 4a0o_A 4a0v_A 4a0w_A 4a13_A
Probab=100.00 E-value=5.4e-111 Score=905.54 Aligned_cols=505 Identities=29% Similarity=0.453 Sum_probs=487.2
Q ss_pred cccccccHHHHHHHHHHHHHHHHHhhhcCCCCCCceeeecCC--CCEEEeccHHHHhhcccccChHHHHHHHHHHhhhcc
Q 008712 11 SLKRESGTKVHHANIQASKAVADIIRTTLGPRSMLKMLLDAS--GGIVVTNDGNAILRELDVAHPAAKSMIELSRTQDEE 88 (557)
Q Consensus 11 ~~~~~~g~~~~~~~~~~~~~l~~~v~sslGP~G~~k~i~~~~--g~~~iTnDG~tIlk~l~~~hP~a~ll~~~~~~~~~~ 88 (557)
+.+.++|.++|.+|+.||+.|+++|+|||||+||+|||+++. |+++|||||+||||+|+++||+|+|++++|++|+++
T Consensus 2 ~~~~~~g~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~~~G~~~iTnDG~tIlk~i~v~hp~Akll~e~a~~qd~e 81 (513)
T 3iyg_B 2 GADEERAETARLSSFIGAIAIGDLVKSTLGPKGMDKILLSSGRDASLMVTNDGATILKNIGVDNPAAKVLVDMSRVQDDE 81 (513)
T ss_pred CcchhhhHHHHHHHHHHHHHHHHHHHhccCCCCCeEEeecCCCCCCeEEECCHHHHHHHccccCHHHHHHHHHHHHhhhh
Confidence 567889999999999999999999999999999999999999 999999999999999999999999999999999999
Q ss_pred ccCChhHHHHHHHHHHHHHHHHHhcCCChhhHHHHHHHHHHHHHHHHhhcccccCCC---CHHHHHHHHHHHhhcccccc
Q 008712 89 VGDGTTSVIVLAGEMLHVAEEFIDKNYHPTVICRAYNKALEDAVAVLDKIAMPIDTN---DRATMLGLVKSCIGTKFTSQ 165 (557)
Q Consensus 89 ~GDGttt~viLa~~Ll~~~~~li~~gi~p~~I~~g~~~a~~~~~~~L~~~s~~v~~~---~~~~l~~ia~t~l~sK~~~~ 165 (557)
+||||||++|||++||+++.+++++|+||..|++||++|++.++++|++++++++.. +++.|.++|+|+++||+.++
T Consensus 82 ~GDGTTtvvVLA~~LL~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~~~~~~~~l~~va~tslssK~~~~ 161 (513)
T 3iyg_B 82 VGDGTTSVTVLAAELLREAESLIAKKIHPQTIIAGWREATKAARQALLNSAVDHGSDEVKFRQDLMNIAGTTLSSKLLTH 161 (513)
T ss_pred hCCChhhhHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhCcCcccccccCHHHHHHHHHhhhccccccc
Confidence 999999999999999999999999999999999999999999999999999998732 57899999999999999999
Q ss_pred hhHHHHHHHHHHHhhcccccCCCccccCcccceEEEEecCCCCCCcEEEEeEEEeccccCCCCCccccCCceEEEEecCC
Q 008712 166 FGDLIADLAIDATTTVGVDLGQGLREVDIKKYIKVEKVPGGQLEDSRVLKGVMFNKDVVAPGKMRRKIVNPRIILLDSPL 245 (557)
Q Consensus 166 ~~~~ls~li~~a~~~v~~~~~~g~~~~d~~~~I~I~~~~G~~~~ds~li~Giv~~~~~~~~~~~~~~~~n~kIll~~~~L 245 (557)
|+++|++++++|+.+++++ +|+. +|+|+++.|++..+|++++|++|++++.++ ||++++||||++++++|
T Consensus 162 ~~~~i~~livdAv~~V~~~-------~d~~-~I~V~ki~gg~~~ds~lv~G~v~dk~~~~~--m~~~~en~kIll~~~~L 231 (513)
T 3iyg_B 162 HKDHFTKLAVEAVLRLKGS-------GNLE-AIHVIKKLGGSLADSYLDEGFLLDKKIGVN--QPKRIENAKILIANTGM 231 (513)
T ss_pred chHHHHHHHHHHHHHhccc-------CCcC-eEEEEEeCCCCccceeEEeeEEEeccccCC--CceeecCceEEEEcCCc
Confidence 9999999999999999742 4543 699999999999999999999999999886 99999999999999999
Q ss_pred cccccc-ccceEEecCHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEeCCCCCHHHHHHHHHcCCeEEecCChhHHHHHH
Q 008712 246 EYKKGE-NQTNAELVKEEDWEVLLKMEEEYIENLCMQILKFKPDLVITEKGLSDLACHYLSKAGVSAIRRLRKTDNNRIA 324 (557)
Q Consensus 246 e~~k~~-~~~~~~i~~~~~l~~~~~~E~~~i~~~l~~i~~~~~~lIi~~~~i~~~al~~L~~~~I~~i~~v~~~~l~~i~ 324 (557)
++++++ .+.++.+++++++.++.+.|+++++++++++++.|++|||++++|++++++||.++||++++++++.+|+||+
T Consensus 232 e~~k~e~~~~~v~iss~~~l~~~~~~E~~~l~~~le~I~~~g~~vvi~~~~I~~~al~~L~~~~I~av~~~~~~~le~ia 311 (513)
T 3iyg_B 232 DTDKIKIFGSRVRVDSTAKVAEIEHAEKEKMKEKVERILKHGINCFINRQLIYNYPEQLFGAAGVMAIEHADFVGVERLA 311 (513)
T ss_pred ccccccccCCceEEcCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEcCCccHHHHHHHHHcCceEEecCCHHHHHHHH
Confidence 999999 9999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhCCeeccCCCCCCCCCcCCccceEEEEEECCeEEEEEEecCCCCeEEEEEccCCHHHHHHHHHHHHHHHHHHHHHHhC
Q 008712 325 KACGAVIVNRPDELQESDVGTGAGLFEVKKIGDEFFAFIVDCKDPKACTVLLRGASKDLLNEVERNLQDAMSVARNIIKN 404 (557)
Q Consensus 325 ~~tG~~ii~~~~~l~~~~lG~~~~~v~~~~ig~~~~~~l~~~~~~~~~TIll~G~t~~~l~e~~~~l~dal~~~~~~~~~ 404 (557)
++||++++++++++++++||+ |+.|++..+|+++|++|+||+++++|||+|||+|+.+++|+||+++|||+++|+++++
T Consensus 312 ~~tGa~ii~~l~~l~~~~LG~-a~~v~~~~ig~~~~~~~~g~~~~~~~tI~lrG~t~~~l~E~kr~l~DAl~~~r~av~~ 390 (513)
T 3iyg_B 312 LVTGGEIASTFDHPELVKLGS-CKLIEEVMIGEDKLIHFSGVALGEACTIVLRGATQQILDEAERSLHDALCVLAQTVKD 390 (513)
T ss_pred HHhCCEEecccccCCHhHCCc-ccEEEEEEECCeEEEEEecCCCCceEEEEecCCCHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 999999999999999999999 9999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcccCCCchHHHHHHHHHhhhccCCCccchHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHhCCCCceeeEeCCC
Q 008712 405 PKLVPGGGATELTVSATLKQKSSSIEGIEKWPYEAAAIAFEAIPRTLAQNCGINVIRTMTALQGKHANGENAWIGIDGNT 484 (557)
Q Consensus 405 g~vvpGGG~~E~~l~~~L~~~~~~~~~~~~~~~~~~a~aL~~ip~~L~~NaG~d~~~~~~~l~~~~~~~~~~~~Gid~~~ 484 (557)
+++|||||++|++|+.+|++++.+.++++|+++++|++||+.||++|++|||+|+.+++.+|+..|..++ .++|||+.+
T Consensus 391 ~~iVpGGGa~e~~~~~~L~~~~~~~~g~~q~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~-~~~G~d~~~ 469 (513)
T 3iyg_B 391 SRTVYGGGCSEMLMAHAVTQLASRTPGKEAVAMESYAKALRMLPTIIADNAGYDSADLVAQLRAAHSEGK-TTAGLDMKE 469 (513)
T ss_pred CcEEeCCcHHHHHHHHHHHHHhhccCcHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHhcCC-CceeecCCC
Confidence 8899999999999999999998888999999999999999999999999999999999999999998765 689999999
Q ss_pred CccccccccccccchHHHHHHHHHHHHHHHHHHhhhHhhcCCc
Q 008712 485 GAISDMKERKIWDAYNVKAQTFKTAIEAACMLLRIDDIVSGIK 527 (557)
Q Consensus 485 ~~i~d~~~~gI~dp~~vk~~~l~~A~e~a~~lL~iD~ii~~~~ 527 (557)
|++.||.+.|||||+.||+++|+.|+|+|++|||||++|...|
T Consensus 470 g~~~d~~~~gI~dp~~vk~~al~~A~~~a~~iL~id~ii~~~~ 512 (513)
T 3iyg_B 470 GTIGDMSVLGITESFQVKRQVLLSAAEAAEVILRVDNIIKAAP 512 (513)
T ss_pred CCccchHhccCEecHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 9999999999999999999999999999999999999998765
No 12
>3p9d_C T-complex protein 1 subunit gamma; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_c* 4d8q_C* 4d8r_c* 2bbm_B 2bbn_B
Probab=100.00 E-value=6.4e-113 Score=926.92 Aligned_cols=526 Identities=58% Similarity=0.963 Sum_probs=493.2
Q ss_pred CCCCcccccccccccccHHHHHHHHHHHHHHHHHhhhcCCCCCCceeeecCCCCEEEeccHHHHhhcccccChHHHHHHH
Q 008712 1 MHSPVLVLKDSLKRESGTKVHHANIQASKAVADIIRTTLGPRSMLKMLLDASGGIVVTNDGNAILRELDVAHPAAKSMIE 80 (557)
Q Consensus 1 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~l~~~v~sslGP~G~~k~i~~~~g~~~iTnDG~tIlk~l~~~hP~a~ll~~ 80 (557)
||+|+.+++++.+..+|.++|.+|+.||..|+++|++||||+||+|||+++.|+++|||||+|||++|+++||+|+|+++
T Consensus 1 ~~~~~~~~~~~~~~~~g~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~G~~~ITnDG~TIlk~i~~~hP~Akll~e 80 (590)
T 3p9d_C 1 MQAPVVFMNASQERTTGRQAQISNITAAKAVADVIRTCLGPKAMLKMLLDPMGGLVLTNDGHAILREIDVAHPAAKSMLE 80 (590)
T ss_dssp -----CCSCTTCCBCTTHHHHHTTHHHHHHHHHHSTTTCSSSCCCCEEECTTTCCBCCCCHHHHHHHSCCCCHHHHTHHH
T ss_pred CCCCeEeecCCcchhhHHHHHHHHHHHHHHHHHHHHhccCCCCCeEEEECCCCCeEEECCHHHHHHHhhCCCHHHHHHHH
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhhccccCChhHHHHHHHHHHHHHHHH-HhcCCChhhHHHHHHHHHHHHHHHHhhcccccCCCCHHHHHHHHHHHhh
Q 008712 81 LSRTQDEEVGDGTTSVIVLAGEMLHVAEEF-IDKNYHPTVICRAYNKALEDAVAVLDKIAMPIDTNDRATMLGLVKSCIG 159 (557)
Q Consensus 81 ~~~~~~~~~GDGttt~viLa~~Ll~~~~~l-i~~gi~p~~I~~g~~~a~~~~~~~L~~~s~~v~~~~~~~l~~ia~t~l~ 159 (557)
+|++|++++||||||++|||++||+++.++ +++|+||..|++||++|++.++++|++++++++..+++.|.++|+|+|+
T Consensus 81 ~a~~qd~e~GDGTTtvvVLA~eLL~~a~~l~l~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~~~e~L~~vA~tsls 160 (590)
T 3p9d_C 81 LSRTQDEEVGDGTTTVIILAGEILAQCAPYLIEKNIHPVIIIQALKKALTDALEVIKQVSKPVDVENDAAMKKLIQASIG 160 (590)
T ss_dssp HTTTHHHHCSSCHHHHHHHHHHHHHHHHHHHHSCCCCHHHHHHHHHHHHHHHHHHHHHHCCTTTTCCTHHHHHHHTTTST
T ss_pred HHHhhhhhhCCCccchHHHHHHHHhhhHHhhhhcCCCHHHHHHHHHHHHHHHHHHHHHHhhccccCCHHHHHHHHHHHHh
Confidence 999999999999999999999999999999 9999999999999999999999999999999987778899999999999
Q ss_pred cccccchhHHHHHHHHHHHhhcccccCCCc-----cccCcccceEEEEecCCCCCCcEEEEeEEEeccccCCCCCccccC
Q 008712 160 TKFTSQFGDLIADLAIDATTTVGVDLGQGL-----REVDIKKYIKVEKVPGGQLEDSRVLKGVMFNKDVVAPGKMRRKIV 234 (557)
Q Consensus 160 sK~~~~~~~~ls~li~~a~~~v~~~~~~g~-----~~~d~~~~I~I~~~~G~~~~ds~li~Giv~~~~~~~~~~~~~~~~ 234 (557)
||+.++|+++|++++++|+.+++++...+. .++|+.++|+|++++|+++.||++++|++|++++.++ +|+++++
T Consensus 161 SK~~~~~~~~i~~livdAv~~V~~~~~~~~~~~~~~~vDl~~~I~I~ki~Ggs~~ds~lv~Gmvfdk~~~~~-~m~~~~e 239 (590)
T 3p9d_C 161 TKYVIHWSEKMCELALDAVKTVRKDLGQTVEGEPNFEIDIKRYVRVEKIPGGDVLDSRVLKGVLLNKDVVHP-KMSRHIE 239 (590)
T ss_dssp TSTTGGGHHHHHHHHHHHHTTSTTCC-----------CCCSSSSCEEEESSCCGGGCBCCSSEEECCCCSCT-TSCSCEE
T ss_pred cccccccHHHHHHHHHHHHHHhcccccCccccccccccchhhceEEEEecCCCcccceeeeEEEEecccCCC-CCcceee
Confidence 999999999999999999999986321111 1467777899999999999999999999999999998 8999999
Q ss_pred CceEEEEecCCccccccccceEEecCHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEeCCCCCHHHHHHHHHcCCeEEec
Q 008712 235 NPRIILLDSPLEYKKGENQTNAELVKEEDWEVLLKMEEEYIENLCMQILKFKPDLVITEKGLSDLACHYLSKAGVSAIRR 314 (557)
Q Consensus 235 n~kIll~~~~Le~~k~~~~~~~~i~~~~~l~~~~~~E~~~i~~~l~~i~~~~~~lIi~~~~i~~~al~~L~~~~I~~i~~ 314 (557)
||||++++++|+++++++++++.+++++++.++++.|+++++++++++++.|++|||++++|++++++||.++||++|++
T Consensus 240 n~kIll~d~~Le~~K~e~~~~v~Is~~~~l~~il~~E~~~l~~~vekI~~~g~~vII~e~~I~d~Al~~L~k~~I~av~~ 319 (590)
T 3p9d_C 240 NPRVVLLDCPLEYKKGESQTNIEIEKEEDWNRILQIEEEQVQLMCEQILAVRPTLVITEKGVSDLAQHYLLKGGCSVLRR 319 (590)
T ss_dssp SCCEECCCCCCSCCCCTTTEECCBCSTTHHHHHHHHHHHHHHHHHHHHHTTCCSEECCSSCCCTHHHHHHHHTTCCCCCC
T ss_pred eeEEEEEcccccccccccCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEecCCcCHHHHHHHHhccceeecc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CChhHHHHHHHHhCCeeccCCCCCCCCCcCCccceEEEEEECCeEEEEEEecCCCCe-----------------------
Q 008712 315 LRKTDNNRIAKACGAVIVNRPDELQESDVGTGAGLFEVKKIGDEFFAFIVDCKDPKA----------------------- 371 (557)
Q Consensus 315 v~~~~l~~i~~~tG~~ii~~~~~l~~~~lG~~~~~v~~~~ig~~~~~~l~~~~~~~~----------------------- 371 (557)
+++.+|+|||++|||+++++++++++++||+.|+.|++.++|+++|++|+||.++..
T Consensus 320 ~~k~~le~ia~~TGa~iis~l~~~~~~~LG~~a~~v~~~~ig~d~~~~i~g~~~~~~~~~~~~~~~~~~~~k~~~~~~~~ 399 (590)
T 3p9d_C 320 VKKSDNNRIARVTGATIVNRVEDLKESDVGTNCGLFKVEMIGDEYFSFLDNCKEPGSGSGWSHPQFEKGSGKRRWKKNFI 399 (590)
T ss_dssp CCHHHHHHHHHHHTCCCCSCSTTCCTTSCBCCCSEEECCEETTEECEEECC-----------------------------
T ss_pred CCHHHHHHHHHHhCCceeecccCCCHHHhCCcCCEEEEEEEcCcEEEEEeCCCCccccccccccccccccchhhhhcchh
Confidence 999999999999999999999999999999659999999999999999999977666
Q ss_pred ---------------------------------EEEEEccCCHHHHHHHHHHHHHHHHHHHHHHhCCCcccCCCchHHHH
Q 008712 372 ---------------------------------CTVLLRGASKDLLNEVERNLQDAMSVARNIIKNPKLVPGGGATELTV 418 (557)
Q Consensus 372 ---------------------------------~TIll~G~t~~~l~e~~~~l~dal~~~~~~~~~g~vvpGGG~~E~~l 418 (557)
|||+|||+|+.+++|.||+++|||+++|+++++|++|||||++|++|
T Consensus 400 ~~~i~~r~~~i~~~~~~~~~~~~~~~~~l~ggv~tI~lrg~te~~l~E~kr~i~DAl~a~r~av~~~~iVpGGGa~e~~~ 479 (590)
T 3p9d_C 400 AVSAANRFKKISSSGALGSGHHHHHHHHGSGKACTIMLRGGSKDILNEIDRNLQDAMAVARNVMLSPSLSPGGGATEMAV 479 (590)
T ss_dssp ----------------------------CCCSCCCEEEECSSTTTHHHHHHHHHHHHHHHHHHHHCCCEECTTTHHHHHH
T ss_pred hHHHHHHHHHHHHHHhccCCHHHHHHHhhcCCeeEEEEcCCCHHHHHHHHHHHHHHHHHHHHHHhcCCEEeCccHHHHHH
Confidence 99999999999999999999999999999999988999999999999
Q ss_pred HHHHHhhhccCCCccchHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHhCCCCceeeEeCCCCccccccccccccc
Q 008712 419 SATLKQKSSSIEGIEKWPYEAAAIAFEAIPRTLAQNCGINVIRTMTALQGKHANGENAWIGIDGNTGAISDMKERKIWDA 498 (557)
Q Consensus 419 ~~~L~~~~~~~~~~~~~~~~~~a~aL~~ip~~L~~NaG~d~~~~~~~l~~~~~~~~~~~~Gid~~~~~i~d~~~~gI~dp 498 (557)
+.+|++++...++++|+++++|++||+.||++|++|||+|+.+++.+|+..|..++ +++|||+.+|++.||++.|||||
T Consensus 480 s~~L~~~~~~~~g~eq~~i~~~a~ALe~ip~~La~NaG~d~~~vv~~l~~~h~~~~-~~~G~d~~~g~~~dm~~~gI~dp 558 (590)
T 3p9d_C 480 SVKLAEKAKQLEGIQQWPYQAVADAMECIPRTLIQNAGGDPIRLLSQLRAKHAQGN-FTTGIDGDKGKIVDMVSYGIWEP 558 (590)
T ss_dssp HHHHHHHHHHSCSTTHHHHHHHHHHTTHHHHHHHHTTCSCHHHHHHHHHHHHTTSC-TTCBCCTTSSSCBCTTTTTCCEE
T ss_pred HHHHHHHhhcCChHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHhcCC-CCEeEeCCCCeEeehHHcCCeEc
Confidence 99999998888999999999999999999999999999999999999999997764 78999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHhhhHhhcCCcc
Q 008712 499 YNVKAQTFKTAIEAACMLLRIDDIVSGIKK 528 (557)
Q Consensus 499 ~~vk~~~l~~A~e~a~~lL~iD~ii~~~~~ 528 (557)
+.||+++|+.|+|+|++|||||++|...|+
T Consensus 559 ~~vk~~al~~A~e~a~~iL~id~ii~~~~~ 588 (590)
T 3p9d_C 559 EVIKQQSVKTAIESACLLLRVDDIVSGVRK 588 (590)
T ss_dssp HHHHHHHHHHHHHHHHHTTSEEEEECCCC-
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 999999999999999999999999987654
No 13
>3iyg_D T-complex protein 1 subunit delta; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=5e-110 Score=898.98 Aligned_cols=507 Identities=33% Similarity=0.549 Sum_probs=487.6
Q ss_pred ccccccHHHHHHHHHHHHHHHHHhhhcCCCCCCceeeecCCCCEEEeccHHHHhhcccccChHHHHHHHHHHhhhccccC
Q 008712 12 LKRESGTKVHHANIQASKAVADIIRTTLGPRSMLKMLLDASGGIVVTNDGNAILRELDVAHPAAKSMIELSRTQDEEVGD 91 (557)
Q Consensus 12 ~~~~~g~~~~~~~~~~~~~l~~~v~sslGP~G~~k~i~~~~g~~~iTnDG~tIlk~l~~~hP~a~ll~~~~~~~~~~~GD 91 (557)
.+.++|.++|.+|+.||..|+++|+|||||+||+|||+++.|+++|||||+|||++|+++||+|+|++++|++|++++||
T Consensus 4 ~~~~~g~~~~~~ni~a~~~la~~vkttLGPkG~~kml~~~~G~~~iTnDG~tIlk~i~v~hP~akll~~~a~~qd~~~GD 83 (518)
T 3iyg_D 4 QDRDKPAQIRFSNISAAKAVADAIRTSLGPKGMDKMIQDGKGDVTITNDGATILKQMQVLHPAARMLVELSKAQDIEAGD 83 (518)
T ss_pred ccchhhHHHHHHHHHHHHHHHHHHHhccCCCCCceeeeCCCCCeEEECCHHHHHHHcccchHHHHHHHHHHHHhhhhhCC
Confidence 35789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ChhHHHHHHHHHHHHHHHHHhcCCChhhHHHHHHHHHHHHHHHHhhcccccCCCCHHHHHHHHHHHhhcccccchhHHHH
Q 008712 92 GTTSVIVLAGEMLHVAEEFIDKNYHPTVICRAYNKALEDAVAVLDKIAMPIDTNDRATMLGLVKSCIGTKFTSQFGDLIA 171 (557)
Q Consensus 92 Gttt~viLa~~Ll~~~~~li~~gi~p~~I~~g~~~a~~~~~~~L~~~s~~v~~~~~~~l~~ia~t~l~sK~~~~~~~~ls 171 (557)
||||++|||++||+++.+++++|+||..|++||++|++.++++|++++++++..+++.|.++|+|+++||+.+.|.++|+
T Consensus 84 GTTtvvVLA~~Ll~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~~~~~l~~vA~tsl~sK~~~~~~~~i~ 163 (518)
T 3iyg_D 84 GTTSVVIIAGSLLDSCTKLLQKGIHPTIISESFQKALEKGIEILTDMSRPVELSDRETLLNSAATSLNSKVVSQYSSLLS 163 (518)
T ss_pred CceeHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHheeeCCCCChHHHHHHhHhhhccccchhhHHHHH
Confidence 99999999999999999999999999999999999999999999999999987678999999999999999999999999
Q ss_pred HHHHHHHhhcccccCCCccccCcccceEEEEecCCCCCCcEEEEeEEEeccccCCCCCccccCCceEEEEecCCcccccc
Q 008712 172 DLAIDATTTVGVDLGQGLREVDIKKYIKVEKVPGGQLEDSRVLKGVMFNKDVVAPGKMRRKIVNPRIILLDSPLEYKKGE 251 (557)
Q Consensus 172 ~li~~a~~~v~~~~~~g~~~~d~~~~I~I~~~~G~~~~ds~li~Giv~~~~~~~~~~~~~~~~n~kIll~~~~Le~~k~~ 251 (557)
+++++|+.+++.+..++ .+|++ +|+|+++.|++..+|++++|++|++++.+ +||++++||||++++++|++++.+
T Consensus 164 ~livdAv~~V~~~~~~~--~~d~~-~I~V~k~~Gg~~~ds~lv~G~~~dk~~~~--~mp~~i~n~kIlll~~~Le~~k~~ 238 (518)
T 3iyg_D 164 PMSVDAVMKVIDPATAT--SVDLR-DIKIVKKLGGTIDDCELVEGLVLTQKVAN--SGITRVEKAKIGLIQFCLSAPKTD 238 (518)
T ss_pred HHHHHHHHHhhccccCC--Ccccc-eEEEEEcCCCChhhheEeccEEEeccccc--CCCccccCceEEEEEeeccccccc
Confidence 99999999997421122 46665 69999999999999999999999999988 799999999999999999999999
Q ss_pred ccceEEecCHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEe-----CCCCCHHHHHHHHHcCCeEEecCChhHHHHHHHH
Q 008712 252 NQTNAELVKEEDWEVLLKMEEEYIENLCMQILKFKPDLVIT-----EKGLSDLACHYLSKAGVSAIRRLRKTDNNRIAKA 326 (557)
Q Consensus 252 ~~~~~~i~~~~~l~~~~~~E~~~i~~~l~~i~~~~~~lIi~-----~~~i~~~al~~L~~~~I~~i~~v~~~~l~~i~~~ 326 (557)
++.++.++++++++.+++.|+++++++++++.+.|+||||+ +++|++++++||.++||++++++++.+|+|||++
T Consensus 239 ~~~~i~is~~~~~~~~~~~E~~~l~~~le~I~~~g~~lvi~~k~i~~~~I~~~Al~~L~~~~I~av~~~~~~~le~ia~~ 318 (518)
T 3iyg_D 239 MDNQIVVSDYVQMDRVLREERAYILNLVKQIKKTGCNVLLIQKSILRDALSDLALHFLNKMKIMVVKDIEREDIEFICKT 318 (518)
T ss_pred cCceEEecCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeccccccCcCHHHHHHHHHcCcEEEecCCHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999 8999999999999999999999999999999999
Q ss_pred hCCeeccCCCCCCCCCcCCccceEEEEEECC-eEEEEEEecCC-CCeEEEEEccCCHHHHHHHHHHHHHHHHHHHHHHhC
Q 008712 327 CGAVIVNRPDELQESDVGTGAGLFEVKKIGD-EFFAFIVDCKD-PKACTVLLRGASKDLLNEVERNLQDAMSVARNIIKN 404 (557)
Q Consensus 327 tG~~ii~~~~~l~~~~lG~~~~~v~~~~ig~-~~~~~l~~~~~-~~~~TIll~G~t~~~l~e~~~~l~dal~~~~~~~~~ 404 (557)
|||+++++++++++++||+ |+.|++.++|+ ++|++|++|+. +++|||+|||+|+.+++|+||+++|||+++|+++++
T Consensus 319 tGa~ii~~l~~l~~~~LG~-a~~v~~~~~g~~~~~~~~~g~~~~~~~~tI~lrG~te~~l~E~kr~l~DAl~~~r~av~~ 397 (518)
T 3iyg_D 319 IGTKPVAHVDQFTADMLGS-AELAEEVSLNGSGKLIKITGCASPGKTVTIVVRGSNKLVIEEAERSIHDALCVIRCLVKK 397 (518)
T ss_pred hCCEEecccccCCHHHCCc-CcEEEEEEeCCCceEEEEECCCCCCceEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 9999999999999999999 99999999999 89999999987 899999999999999999999999999999999999
Q ss_pred CCcccCCCchHHHHHHHHHhhhccCCCccchHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHhCCCCceeeEeCCC
Q 008712 405 PKLVPGGGATELTVSATLKQKSSSIEGIEKWPYEAAAIAFEAIPRTLAQNCGINVIRTMTALQGKHANGENAWIGIDGNT 484 (557)
Q Consensus 405 g~vvpGGG~~E~~l~~~L~~~~~~~~~~~~~~~~~~a~aL~~ip~~L~~NaG~d~~~~~~~l~~~~~~~~~~~~Gid~~~ 484 (557)
|++|||||++|++|+.+|++++.+.++++|+++++|++||+.||++|++|||+|+.+++.+|++.|..++ .++|||+.+
T Consensus 398 ~~iVpGGGa~e~~~~~~L~~~~~~~~g~~q~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~-~~~G~d~~~ 476 (518)
T 3iyg_D 398 RALIAGGGAPEIELALRLTEYSRTLSGMESYCIRAFADAMEVIPSTLAENAGLNPISTVTELRNRHAQGE-KTTGINVRK 476 (518)
T ss_pred CCEeecCcHHHHHHHHHHHHHhhcCChHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHhccC-CceeEeCCC
Confidence 9999999999999999999998888999999999999999999999999999999999999999998765 679999999
Q ss_pred CccccccccccccchHHHHHHHHHHHHHHHHHHhhhHhhcC
Q 008712 485 GAISDMKERKIWDAYNVKAQTFKTAIEAACMLLRIDDIVSG 525 (557)
Q Consensus 485 ~~i~d~~~~gI~dp~~vk~~~l~~A~e~a~~lL~iD~ii~~ 525 (557)
|++.||++.|||||+.||+++|+.|+|+|++|||||++|+.
T Consensus 477 g~~~d~~~~gI~dp~~vk~~al~~A~e~a~~iL~iD~ii~~ 517 (518)
T 3iyg_D 477 GGISNILEELVVQPLLVSVSALTLATETVRSILKIDDVVNT 517 (518)
T ss_pred CcccchhhccCEEcHHHHHHHHHHHHHHHHHHHhhcceEec
Confidence 99999999999999999999999999999999999999975
No 14
>3iyg_E T-complex protein 1 subunit; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=1.8e-109 Score=894.92 Aligned_cols=508 Identities=35% Similarity=0.558 Sum_probs=487.6
Q ss_pred ccccccHHHHHHHHHHHHHHHHHhhhcCCCCCCceeeecCCCCEEEeccHHHHhhcccccChHHHHHHHHHHhhhccccC
Q 008712 12 LKRESGTKVHHANIQASKAVADIIRTTLGPRSMLKMLLDASGGIVVTNDGNAILRELDVAHPAAKSMIELSRTQDEEVGD 91 (557)
Q Consensus 12 ~~~~~g~~~~~~~~~~~~~l~~~v~sslGP~G~~k~i~~~~g~~~iTnDG~tIlk~l~~~hP~a~ll~~~~~~~~~~~GD 91 (557)
.+..+|.++|.+|+.||+.|+++|+|||||+||+|||+++.|+++|||||+|||++|+++||+|+|++++|++|++++||
T Consensus 3 ~~~~~g~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~g~~~iTnDG~tIlk~i~~~hP~Akll~~~a~~qd~~~GD 82 (515)
T 3iyg_E 3 KSRLMGLEALKSHIMAAKAVANTMKTSLGPNGLDKMMVDKDGDVTVTNDGATILSMMDVDHQIAKLMVELSKSQDDEIGD 82 (515)
T ss_pred chhhchHHHHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCCCeEEeCcHHHHHHHcccCCHHHHHHHHHHHHhhhhhCC
Confidence 45789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ChhHHHHHHHHHHHHHHHHHhcCCChhhHHHHHHHHHHHHHHHHhhcccccCC--CCHHHHHHHHHHHhhcccccchhHH
Q 008712 92 GTTSVIVLAGEMLHVAEEFIDKNYHPTVICRAYNKALEDAVAVLDKIAMPIDT--NDRATMLGLVKSCIGTKFTSQFGDL 169 (557)
Q Consensus 92 Gttt~viLa~~Ll~~~~~li~~gi~p~~I~~g~~~a~~~~~~~L~~~s~~v~~--~~~~~l~~ia~t~l~sK~~~~~~~~ 169 (557)
||||++|||++||+++.+++++|+||..|++||++|++.++++|++++++++. .+++.|.++|+|+++||+.+.+.++
T Consensus 83 GTTtvvVLA~~Ll~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~~~~~~~l~~vA~tsl~sK~i~~~~~~ 162 (515)
T 3iyg_E 83 GTTGVVVLAGALLEEAEQLLDRGIHPIRIADGYEQAARIAIEHLDKISDSVLVDMKNTEPLIQTAKTTLGSKVVNSCHRQ 162 (515)
T ss_pred chhHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhceecCCCccCHHHHHHHHHHHhcccchhHHHHH
Confidence 99999999999999999999999999999999999999999999999998854 4578999999999999998889999
Q ss_pred HHHHHHHHHhhcccccCCCccccCcccceEEEEecCCCCCCcEEEEeEEEeccccCCCCCccccCCceEEEEecCCcccc
Q 008712 170 IADLAIDATTTVGVDLGQGLREVDIKKYIKVEKVPGGQLEDSRVLKGVMFNKDVVAPGKMRRKIVNPRIILLDSPLEYKK 249 (557)
Q Consensus 170 ls~li~~a~~~v~~~~~~g~~~~d~~~~I~I~~~~G~~~~ds~li~Giv~~~~~~~~~~~~~~~~n~kIll~~~~Le~~k 249 (557)
|++++++|+..+... ...++|++ +|+|++++|+++.+|++++|++|++++.+| .|++.++||+|++++++|++.+
T Consensus 163 l~~l~~dav~~V~~~---~~~~~d~~-~I~I~k~~Ggs~~ds~lv~G~~~dk~~~~~-~m~~~~~~~kIall~~~le~~k 237 (515)
T 3iyg_E 163 MAEIAVNAVLTVADM---QRRDVDFE-LIKVEGKVGGRLEDTKLIKGVIVDKDFSHP-QMPKQVEDAKIAILTCPFEPPK 237 (515)
T ss_pred HHHHHHHHHHhhccc---ccCCCCcc-cEEEEEecCCCcccceEEeeEEEecccccc-cccccCCCceEEEEcCcccccc
Confidence 999999999998642 11246664 699999999999999999999999999999 8999999999999999999999
Q ss_pred ccccceEEecCHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEeCCCCCHHHHHHHHHcCCeEEecCChhHHHHHHHHhCC
Q 008712 250 GENQTNAELVKEEDWEVLLKMEEEYIENLCMQILKFKPDLVITEKGLSDLACHYLSKAGVSAIRRLRKTDNNRIAKACGA 329 (557)
Q Consensus 250 ~~~~~~~~i~~~~~l~~~~~~E~~~i~~~l~~i~~~~~~lIi~~~~i~~~al~~L~~~~I~~i~~v~~~~l~~i~~~tG~ 329 (557)
++.++++.+++++++..+.+.|+++++++++++.+.|+||||++++|++++++||.++||++++++++.+|+|||++|||
T Consensus 238 ~~~~~~~~is~~~~l~~~~~~E~~~l~~~lekI~~~g~~vvi~~~~I~~~al~~L~~~~I~~v~~v~k~~le~ia~~tGa 317 (515)
T 3iyg_E 238 PKTKHKLDVTSVEDFKALQKYEKEKFEEMIRQIKETGANLAVCQWGFDDEANHLLLQNDLPAVRWVGGPEIELIAIATGG 317 (515)
T ss_pred ccccceeeeCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeCCCCHHHHHHHHHCCCEEEeccCHHHHHHHHHHhCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeccCCCCCCCCCcCCccceEEEEEECC--eEEEEEEecCCCCeEEEEEccCCHHHHHHHHHHHHHHHHHHHHHHhCCCc
Q 008712 330 VIVNRPDELQESDVGTGAGLFEVKKIGD--EFFAFIVDCKDPKACTVLLRGASKDLLNEVERNLQDAMSVARNIIKNPKL 407 (557)
Q Consensus 330 ~ii~~~~~l~~~~lG~~~~~v~~~~ig~--~~~~~l~~~~~~~~~TIll~G~t~~~l~e~~~~l~dal~~~~~~~~~g~v 407 (557)
+++++++++++++||+ |+.|++.++|+ ++|++|+||.+++.|||+|||+|+.+++|+||+++|||+++|+++++|++
T Consensus 318 ~ii~~l~~l~~~~LG~-a~~v~~~~ig~~k~~~~~~~g~~~~~~~tI~lrG~te~~l~E~kr~i~DAl~~~r~a~~~~~i 396 (515)
T 3iyg_E 318 RIVPRFSELTAEKLGF-AGLVKEISFGTTKDKMLVIEQCKNSRAVTIFIRGGNKMIIEEAKRSLHDALCVIRNLIRDNRV 396 (515)
T ss_pred EEecccccCCHHHCCc-ceEEEEEEeccccceEEEEEcCCCCceEEEEEeCCcHHHHHHHHHHHHHHHHHHHHHHhcCCc
Confidence 9999999999999999 99999999987 89999999999999999999999999999999999999999999999999
Q ss_pred ccCCCchHHHHHHHHHhhhccCCCccchHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHhCCCCceeeEeCCCCcc
Q 008712 408 VPGGGATELTVSATLKQKSSSIEGIEKWPYEAAAIAFEAIPRTLAQNCGINVIRTMTALQGKHANGENAWIGIDGNTGAI 487 (557)
Q Consensus 408 vpGGG~~E~~l~~~L~~~~~~~~~~~~~~~~~~a~aL~~ip~~L~~NaG~d~~~~~~~l~~~~~~~~~~~~Gid~~~~~i 487 (557)
|||||++|++|+.+|++++.+.++++|+++++|++||+.||++|++|||+|+.+++.+|+..|..+.+.++|||+.+|++
T Consensus 397 VpGGGa~e~~~~~~L~~~~~~~~g~~q~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~~G~d~~~g~~ 476 (515)
T 3iyg_E 397 VYGGGAAEISCALAVSQEADKCPTLEQYAMRAFADALEVIPMALAENSGMNPIQTMTEVRARQVKEVNPALGIDCLHKGT 476 (515)
T ss_pred CCCCcHHHHHHHHHHHHHhccCCcHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHhccCCCeeeEecCCCcc
Confidence 99999999999999999998889999999999999999999999999999999999999999976544789999999999
Q ss_pred ccccccccccchHHHHHHHHHHHHHHHHHHhhhHhhcC
Q 008712 488 SDMKERKIWDAYNVKAQTFKTAIEAACMLLRIDDIVSG 525 (557)
Q Consensus 488 ~d~~~~gI~dp~~vk~~~l~~A~e~a~~lL~iD~ii~~ 525 (557)
.||++.|||||+.||+++|+.|+|+|++|||||++|..
T Consensus 477 ~d~~~~gI~dp~~vk~~al~~A~~~a~~iL~iD~ii~~ 514 (515)
T 3iyg_E 477 NDMKHQHVIETLIGKKQQISLATQMVRMILKIDDIRKP 514 (515)
T ss_pred cchHhccCEEcHHHHHHHHHHHHHHHHHHHhHHHhhcC
Confidence 99999999999999999999999999999999999975
No 15
>3iyg_Z T-complex protein 1 subunit zeta; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=1.3e-109 Score=894.54 Aligned_cols=503 Identities=29% Similarity=0.553 Sum_probs=484.0
Q ss_pred cccccHHHHHHHHHHHHHHHHHhhhcCCCCCCceeeecCCCCEEEeccHHHHhhcccccChHHHHHHHHHHhhhccccCC
Q 008712 13 KRESGTKVHHANIQASKAVADIIRTTLGPRSMLKMLLDASGGIVVTNDGNAILRELDVAHPAAKSMIELSRTQDEEVGDG 92 (557)
Q Consensus 13 ~~~~g~~~~~~~~~~~~~l~~~v~sslGP~G~~k~i~~~~g~~~iTnDG~tIlk~l~~~hP~a~ll~~~~~~~~~~~GDG 92 (557)
...+|.+++.+|+.||+.|+++|+|||||+||+|||+++.|+++|||||+|||++|+++||+|+|++++|++|++++|||
T Consensus 4 ~~~~~~~a~~~ni~a~~~la~~vkttlGPkG~~kml~~~~g~~~iTnDG~tIlk~i~v~hp~akll~~~a~~qd~e~GDG 83 (517)
T 3iyg_Z 4 EVARAQAALAVNISAARGLQDVLRTNLGPKGTMKMLVSGAGDIKLTKDGNVLLHEMQIQHPTASLIAKVATAQDDITGDG 83 (517)
T ss_pred hhhhHHHHHHHHHHHHHHHHHHHHhccCCCCCeEEEECCCCCEEEECCHHHHHHHccCcCHHHHHHHHHHHHHHHHhCCC
Confidence 35689999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhHHHHHHHHHHHHHHHHHhcCCChhhHHHHHHHHHHHHHHHHhhcccccCCCCHHHHHHHHHHHhhcccccchhHHHHH
Q 008712 93 TTSVIVLAGEMLHVAEEFIDKNYHPTVICRAYNKALEDAVAVLDKIAMPIDTNDRATMLGLVKSCIGTKFTSQFGDLIAD 172 (557)
Q Consensus 93 ttt~viLa~~Ll~~~~~li~~gi~p~~I~~g~~~a~~~~~~~L~~~s~~v~~~~~~~l~~ia~t~l~sK~~~~~~~~ls~ 172 (557)
|||+++|+++||+++.+++++|+||..|++||++|++.++++|++++++++. +++.|.++|+|+++||+.+.+.++|++
T Consensus 84 TTtvvvLa~~Ll~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~-~~~~L~~va~tsl~sKi~~~~~d~la~ 162 (517)
T 3iyg_Z 84 TTSNVLIIGELLKQADLYISEGLHPRIITEGFEAAKEKALQFLEQVKVSKEM-DRETLIDVARTSLRTKVHAELADVLTE 162 (517)
T ss_pred ceeHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHhhCcCCCC-CHHHHHHHHHHHhccccchhHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999875 688999999999999999999999999
Q ss_pred HHHHHHhhcccccCCCccccCcccceEEEEecCCCCCCcEEEEeEEEeccccCCCCCccccCCceEEEEecCCccccccc
Q 008712 173 LAIDATTTVGVDLGQGLREVDIKKYIKVEKVPGGQLEDSRVLKGVMFNKDVVAPGKMRRKIVNPRIILLDSPLEYKKGEN 252 (557)
Q Consensus 173 li~~a~~~v~~~~~~g~~~~d~~~~I~I~~~~G~~~~ds~li~Giv~~~~~~~~~~~~~~~~n~kIll~~~~Le~~k~~~ 252 (557)
++++|+..+... ...+|++ +|+|++++|++..||++++|++|++++.+| .|+++++||+|++++++|+++++++
T Consensus 163 l~vdaV~~V~~~----~~~~dl~-~I~I~k~~Gg~~~ds~lv~G~v~dk~~~~p-~m~~~ien~kIll~~~~le~~k~e~ 236 (517)
T 3iyg_Z 163 AVVDSILAIKKQ----DEPIDLF-MVEIMEMKHKSETDTSLIRGLVLDHGARHP-DMKKRVEDAYILTCNVSLEYEKTEV 236 (517)
T ss_pred HHHHHhheeccC----CCcCChh-HheeeeecCCCccccceEeeEEEeccCCCC-CccccccCCeEEEeccccccccccc
Confidence 999999988642 2357775 699999999999999999999999999999 8999999999999999999999999
Q ss_pred cceEEecCHHHHHHHHHHHHHHHHHHHHHHHhcCCc---------EEEeCCCCCHHHHHHHHHcCCeEEecCChhHHHHH
Q 008712 253 QTNAELVKEEDWEVLLKMEEEYIENLCMQILKFKPD---------LVITEKGLSDLACHYLSKAGVSAIRRLRKTDNNRI 323 (557)
Q Consensus 253 ~~~~~i~~~~~l~~~~~~E~~~i~~~l~~i~~~~~~---------lIi~~~~i~~~al~~L~~~~I~~i~~v~~~~l~~i 323 (557)
+.++.++++++++.+++.|++++++.+++|...+++ |||++++|++.+++||.++||++++++++.+|+||
T Consensus 237 ~~~~~i~~~~~l~~~~~~E~~~i~~~v~~I~~~~~~v~~~~~~~lvIi~~~~I~d~al~~L~~~gI~~v~~v~~~~leri 316 (517)
T 3iyg_Z 237 NSGFFYKSAEEREKLVKAERKFIEDRVKKIIELKKKVCGDSDKGFVVINQKGIDPFSLDALAKEGIIALRRAKRRNMERL 316 (517)
T ss_pred ceeEEeCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhccCCceEEEecccCCHHHHHHHHHCCCEEEEecCHHHHHHH
Confidence 999999999999999999999999999999988776 58999999999999999999999999999999999
Q ss_pred HHHhCCeeccCCCCCCCCC-cCCccceEEEEEECCeEEEEEEecCCCCeEEEEEccCCHHHHHHHHHHHHHHHHHHHHHH
Q 008712 324 AKACGAVIVNRPDELQESD-VGTGAGLFEVKKIGDEFFAFIVDCKDPKACTVLLRGASKDLLNEVERNLQDAMSVARNII 402 (557)
Q Consensus 324 ~~~tG~~ii~~~~~l~~~~-lG~~~~~v~~~~ig~~~~~~l~~~~~~~~~TIll~G~t~~~l~e~~~~l~dal~~~~~~~ 402 (557)
+++||++++++++++++++ ||+ |+ |++.++|+++|++|++|++++.|||+|||+|+.+++|.||+++|||+++|+++
T Consensus 317 a~~tGa~iv~~l~~l~~~~~LG~-a~-v~e~~ig~~~~~~~~g~~~~~~~TI~lrG~t~~~l~E~kr~l~DAl~~~r~av 394 (517)
T 3iyg_Z 317 TLACGGIALNSLDDLNPDCLLGH-AG-VYEYTLGEEKFTFIEKCNNPRSVTLLIKGPNKHTLTQIKDAIRDGLRAVKNAI 394 (517)
T ss_pred HHHhCCEEecchhhCcccccCCc-ce-EEEEEEcCceEEEEeCCCCchhheeeecCCcHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999 999 99 99999999999999999999999999999999999999999999999999999
Q ss_pred hCCCcccCCCchHHHHHHHHHhhhccCCCccchHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHhCCCCceeeEeC
Q 008712 403 KNPKLVPGGGATELTVSATLKQKSSSIEGIEKWPYEAAAIAFEAIPRTLAQNCGINVIRTMTALQGKHANGENAWIGIDG 482 (557)
Q Consensus 403 ~~g~vvpGGG~~E~~l~~~L~~~~~~~~~~~~~~~~~~a~aL~~ip~~L~~NaG~d~~~~~~~l~~~~~~~~~~~~Gid~ 482 (557)
++|++|||||++|++|+.+|++++.+.++++|+++++|++||+.+|++|++|||+|+.+++.+|+..|..++ .++|||+
T Consensus 395 ~~~~iVpGGGa~e~~~s~~L~~~~~~~~g~eq~~i~~~a~ALe~iP~~La~NaG~d~~~~v~~l~~~h~~~~-~~~G~d~ 473 (517)
T 3iyg_Z 395 DDGCVVPGAGAVEVAMAEALVKYKPSVKGRAQLGVQAFADALLIIPKVLAQNSGFDLQETLVKVQAEHSESG-QLVGVDL 473 (517)
T ss_pred hcceEecCccHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHhcCC-CcEEEeC
Confidence 999999999999999999999999888999999999999999999999999999999999999999997665 7899999
Q ss_pred CCCccccccccccccchHHHHHHHHHHHHHHHHHHhhhHhhcC
Q 008712 483 NTGAISDMKERKIWDAYNVKAQTFKTAIEAACMLLRIDDIVSG 525 (557)
Q Consensus 483 ~~~~i~d~~~~gI~dp~~vk~~~l~~A~e~a~~lL~iD~ii~~ 525 (557)
.+|++.||++.|||||+.||+++|+.|+|+|++|||||++|..
T Consensus 474 ~~g~~~d~~~~gI~dp~~vk~~al~~A~e~a~~iL~iD~ii~~ 516 (517)
T 3iyg_Z 474 NTGEPMVAAEAGIWDNYCVKKQLLHSCTVIATNILLVDEIMRA 516 (517)
T ss_pred CCCcccchhhccCeecHHHHHHHHHHHHHHHHHHHHHHHHhhC
Confidence 9999999999999999999999999999999999999999864
No 16
>3p9d_D T-complex protein 1 subunit delta; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_d* 4d8q_D* 4d8r_d*
Probab=100.00 E-value=3.4e-111 Score=909.08 Aligned_cols=519 Identities=30% Similarity=0.513 Sum_probs=493.0
Q ss_pred CCCCcccccccccccccHHHHHHHHHHHHHHHHHhhhcCCCCCCceeeecCCCCEEEeccHHHHhhcccccChHHHHHHH
Q 008712 1 MHSPVLVLKDSLKRESGTKVHHANIQASKAVADIIRTTLGPRSMLKMLLDASGGIVVTNDGNAILRELDVAHPAAKSMIE 80 (557)
Q Consensus 1 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~l~~~v~sslGP~G~~k~i~~~~g~~~iTnDG~tIlk~l~~~hP~a~ll~~ 80 (557)
|..+-.-++.+.+..+|.++|.+|+.||+.|+++|+|||||+||+|||+++.|+++|||||+|||++|+++||+++|+++
T Consensus 1 ~~~~~~~~~~~~~~~~g~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~G~~~iTnDG~tIlk~i~v~hP~akll~e 80 (528)
T 3p9d_D 1 MSAKVPSNATFKNKEKPQEVRKANIIAARSVADAIRTSLGPKGMDKMIKTSRGEIIISNDGHTILKQMAILHPVARMLVE 80 (528)
T ss_dssp ------CCCSSCBCCCHHHHHHHHHHHHHHHHHHHTTTSSTTCCCEEEECSSCCEEEECCHHHHHHHSCCCCTTHHHHHH
T ss_pred CCCCcccccccchhcchHHHHHHHHHHHHHHHHHHHhccCCCCCeEEEEcCCCCeEEECCHHHHHHHcccCCHHHHHHHH
Confidence 53332345667788999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhhccccCChhHHHHHHHHHHHHHHHHHhcCCChhhHHHHHHHHHHHHHHHHhhcccccCCCCHHHHHHHHHHHhhc
Q 008712 81 LSRTQDEEVGDGTTSVIVLAGEMLHVAEEFIDKNYHPTVICRAYNKALEDAVAVLDKIAMPIDTNDRATMLGLVKSCIGT 160 (557)
Q Consensus 81 ~~~~~~~~~GDGttt~viLa~~Ll~~~~~li~~gi~p~~I~~g~~~a~~~~~~~L~~~s~~v~~~~~~~l~~ia~t~l~s 160 (557)
+|++|++++||||||++|||++||+++.+++++|+||..|++||++|++.++++|+++++|++..+++.|.++|+|+++|
T Consensus 81 ~a~~qd~e~GDGTTtvvVLA~~Ll~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~~~e~l~~va~tsl~s 160 (528)
T 3p9d_D 81 VSAAQDSEAGDGTTSVVILTGALLGAAERLLNKGIHPTIIADSFQSAAKRSVDILLEMCHKVSLSDREQLVRAASTSLSS 160 (528)
T ss_dssp HHHHHHHHTCSCSHHHHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHTTCCCCCSCCHHHHHHHHHHHSCS
T ss_pred HHHHhhhhhCCChhhHHHHHHHHHHHHHHHHHCCCChHHHHHHHHHHHHHHHHHHHHhhCCCCCCCHHHHHHHHHHHhcC
Confidence 99999999999999999999999999999999999999999999999999999999999999876789999999999999
Q ss_pred ccccchhHHHHHHHHHHHhhcccccCCCccccCcccceEEEEecCCCCCCcEEEEeEEEeccccCCCCCccccCCceEEE
Q 008712 161 KFTSQFGDLIADLAIDATTTVGVDLGQGLREVDIKKYIKVEKVPGGQLEDSRVLKGVMFNKDVVAPGKMRRKIVNPRIIL 240 (557)
Q Consensus 161 K~~~~~~~~ls~li~~a~~~v~~~~~~g~~~~d~~~~I~I~~~~G~~~~ds~li~Giv~~~~~~~~~~~~~~~~n~kIll 240 (557)
|+.++|+++|++++++|+.++++.. ++ .+|++ +|+|++++|+++++|++++|++|++++.||..|+++++||||++
T Consensus 161 K~~~~~~~~i~~livdAv~~V~~~~-~~--~i~v~-~I~I~k~~Gg~~~ds~lv~G~v~dk~~~~~~~m~~~ien~kIll 236 (528)
T 3p9d_D 161 KIVSQYSSFLAPLAVDSVLKISDEN-SK--NVDLN-DIRLVKKVGGTIDDTEMIDGVVLTQTAIKSAGGPTRKEKAKIGL 236 (528)
T ss_dssp SSCSTTHHHHHHHHHHHHHTTCCTT-TT--CCCGG-GSBCCCCCSSCSCCCEEESSCBCCCCCCCSSSCCSEESSEEEEE
T ss_pred CccchhHHHHHHHHHHHHHHhcccc-CC--ccceE-EEEEEEecCCCccceEEEeeeEEeecccCcccCcccccCceEEE
Confidence 9999999999999999999998521 23 46775 59999999999999999999999999999833999999999999
Q ss_pred EecCCccccccccceEEecCHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEeCCCC-----CHHHHHHHHHcCCeEEecC
Q 008712 241 LDSPLEYKKGENQTNAELVKEEDWEVLLKMEEEYIENLCMQILKFKPDLVITEKGL-----SDLACHYLSKAGVSAIRRL 315 (557)
Q Consensus 241 ~~~~Le~~k~~~~~~~~i~~~~~l~~~~~~E~~~i~~~l~~i~~~~~~lIi~~~~i-----~~~al~~L~~~~I~~i~~v 315 (557)
++++|++++++.++++.++++++++.++++|+++++++++++.+.|+||||++++| ++.+++||.++||++++++
T Consensus 237 ~~~~le~~k~~~~~~i~i~~~~~~~~~~~~E~~~l~~~le~I~~~g~~vvi~~~~I~~~a~~~~al~~L~~~~I~av~~~ 316 (528)
T 3p9d_D 237 IQFQISPPKPDTENNIIVNDYRQMDKILKEERAYLLNICKKIKKAKCNVLLIQKSILRDAVNDLALHFLSKLNIMVVKDI 316 (528)
T ss_dssp ECCCSSCCCCSSEEEEEESSSSHHHHHTHHHHHHHHHHHHHHHHTTCCEEEESSCSCTTSCSCHHHHHHTTTSCCEEECC
T ss_pred EeccccccccccCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeCCcccccCCHHHHHHHHHcCcEEEEeC
Confidence 99999999999999999999999999999999999999999999999999999999 9999999999999999999
Q ss_pred ChhHHHHHHHHhCCeeccCCCCCCCCCcCCccceEEEEEECCeEEEEEEecC--C-CCeEEEEEccCCHHHHHHHHHHHH
Q 008712 316 RKTDNNRIAKACGAVIVNRPDELQESDVGTGAGLFEVKKIGDEFFAFIVDCK--D-PKACTVLLRGASKDLLNEVERNLQ 392 (557)
Q Consensus 316 ~~~~l~~i~~~tG~~ii~~~~~l~~~~lG~~~~~v~~~~ig~~~~~~l~~~~--~-~~~~TIll~G~t~~~l~e~~~~l~ 392 (557)
++.+|+|||++||++++++++++++++||+ |+.|++.++|+++|.+|++|+ + +++|||+|||+|+.+++|.||+++
T Consensus 317 ~k~~le~ia~~tGa~ii~~~~~l~~~~LG~-a~~v~~~~ig~~~~~~i~g~~~~~~~~~~tI~lrG~te~~l~E~kr~i~ 395 (528)
T 3p9d_D 317 EREEIEFLSKGLGCKPIADIELFTEDRLDS-ADLVEEIDSDGSKIVRVTGIRNNNARPTVSVVIRGANNMIIDETERSLH 395 (528)
T ss_dssp CTHHHHHHHHHHTCCCCSCSTTCCSSSEEE-ESCEECCEETTEECCBCTTBCCGGGCCCCEEECCCSSTTHHHHHHHHHT
T ss_pred CHHHHHHHHHHHCCEEecccccCCHHHCCc-ccEEEEEEECCEEEEEEEcccccCCCceEEEEEcCCCHHHHHHHHHHHH
Confidence 999999999999999999999999999999 999999999999999999998 6 899999999999999999999999
Q ss_pred HHHHHHHHHHhCCCcccCCCchHHHHHHHHHhhhccCCCccchHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHhC
Q 008712 393 DAMSVARNIIKNPKLVPGGGATELTVSATLKQKSSSIEGIEKWPYEAAAIAFEAIPRTLAQNCGINVIRTMTALQGKHAN 472 (557)
Q Consensus 393 dal~~~~~~~~~g~vvpGGG~~E~~l~~~L~~~~~~~~~~~~~~~~~~a~aL~~ip~~L~~NaG~d~~~~~~~l~~~~~~ 472 (557)
|||+++|+++++|++|||||++|++|+.+|++++.+.++++|+++++|++||+.||++|++|||+|+.+++.+|+..|..
T Consensus 396 DAl~~~r~av~~~~iVpGGGa~e~~~s~~L~~~~~~~~g~eq~~i~~~a~ALe~ip~~La~NaG~d~~~vv~~l~~~h~~ 475 (528)
T 3p9d_D 396 DALCVIRCLVKERGLIAGGGAPEIEISRRLSKEARSMEGVQAFIWQEFASALEVIPTTLAENAGLNSIKVVTELRSKHEN 475 (528)
T ss_dssp TTHHHHHHHHHSSCEEETTTHHHHHHHHHHHHCCTTSCHHHHTTHHHHHHHHTHHHHHHHHTTSSCHHHHHHHHTTCCCS
T ss_pred HHHHHHHHHHhcCCccCCCCHHHHHHHHHHHHHhhccChHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHhc
Confidence 99999999999999999999999999999999988888999999999999999999999999999999999999998876
Q ss_pred CCCceeeEeCCCCccccccccccccchHHHHHHHHHHHHHHHHHHhhhHhhcC
Q 008712 473 GENAWIGIDGNTGAISDMKERKIWDAYNVKAQTFKTAIEAACMLLRIDDIVSG 525 (557)
Q Consensus 473 ~~~~~~Gid~~~~~i~d~~~~gI~dp~~vk~~~l~~A~e~a~~lL~iD~ii~~ 525 (557)
++ .++|||+.+|++.||++.|||||+.||+++|+.|+|+|++|||||++|..
T Consensus 476 ~~-~~~G~d~~~g~~~dm~~~gI~dp~~vk~~al~~A~e~a~~iL~iD~ii~~ 527 (528)
T 3p9d_D 476 GE-LNDGISVRRSGTTNTYEEHILQPVLVSTSAITLASECVKSILRIDDIAFS 527 (528)
T ss_dssp SS-CCCCCCSSSSSCCCHHHHCCEEEHHHHHHHHHHHHHHHHHHHHCSCCCBC
T ss_pred cC-CccceecCCCCccchHhccCeecHHHHHHHHHHHHHHHHHHHhhhHheec
Confidence 64 68999999999999999999999999999999999999999999999875
No 17
>3p9d_E T-complex protein 1 subunit epsilon; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_e* 4d8q_E* 4d8r_e*
Probab=100.00 E-value=4.7e-110 Score=905.43 Aligned_cols=521 Identities=31% Similarity=0.527 Sum_probs=489.0
Q ss_pred CCccccccc--ccccccHHHHHHHHHHHHHHHHHhhhcCCCCCCceeeecCCCCEEEeccHHHHhhcccccChHHHHHHH
Q 008712 3 SPVLVLKDS--LKRESGTKVHHANIQASKAVADIIRTTLGPRSMLKMLLDASGGIVVTNDGNAILRELDVAHPAAKSMIE 80 (557)
Q Consensus 3 ~~~~~~~~~--~~~~~g~~~~~~~~~~~~~l~~~v~sslGP~G~~k~i~~~~g~~~iTnDG~tIlk~l~~~hP~a~ll~~ 80 (557)
+|..+++++ .+..+|.++|.+|+.||+.|+++|+|||||+||+|||+++.|+++|||||+||||+|+++||+|+|+++
T Consensus 27 ~~~~~~~~~~~~~~~~g~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~G~~~iTnDG~tIlk~i~v~hP~Akll~e 106 (562)
T 3p9d_E 27 RPFIIVKDQGNKKRQHGLEAKKSHILAARSVASIIKTSLGPRGLDKILISPDGEITITNDGATILSQMELDNEIAKLLVQ 106 (562)
T ss_dssp ---CCCSSBCCCSCSHHHHHHHHHHHHHHHHHHHTTTSSSTTCCEEEEECSSSCEEEESCHHHHHHHSCCCSHHHHHHHH
T ss_pred CCeEEeccCCcceecchHHHHHHHHHHHHHHHHHHHhccCCCCCeEEEEcCCCCEEEECCHHHHHHHccCCCHHHHHHHH
Confidence 354455554 366789999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhhccccCChhHHHHHHHHHHHHHHHHHhcCCChhhHHHHHHHHHHHHHHHHhhcccccCCCC----HHHHHHHHHH
Q 008712 81 LSRTQDEEVGDGTTSVIVLAGEMLHVAEEFIDKNYHPTVICRAYNKALEDAVAVLDKIAMPIDTND----RATMLGLVKS 156 (557)
Q Consensus 81 ~~~~~~~~~GDGttt~viLa~~Ll~~~~~li~~gi~p~~I~~g~~~a~~~~~~~L~~~s~~v~~~~----~~~l~~ia~t 156 (557)
+|++|++++||||||++|||++||+++.+++++|+||..|++||++|++.++++|++++++++..+ ++.|.++|+|
T Consensus 107 ~a~~qd~e~GDGTTtvvVLA~~LL~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~~~~~~~e~L~~vA~t 186 (562)
T 3p9d_E 107 LSKSQDDEIGDGTTGVVVLASALLDQALELIQKGIHPIKIANGFDEAAKLAISKLEETCDDISASNDELFRDFLLRAAKT 186 (562)
T ss_dssp HHHHHHHHTSSCTTHHHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHTTTTTSSSSBCCCSSCHHHHHHHHHH
T ss_pred HHHHHHhhcCCCcccHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhccCcCCCcchhhHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999999987532 2789999999
Q ss_pred HhhcccccchhHHHHHHHHHHHhhcccccCCCccccCcccceEEEEecCCCCCCcEEEEeEEEeccccCCCCCcccc---
Q 008712 157 CIGTKFTSQFGDLIADLAIDATTTVGVDLGQGLREVDIKKYIKVEKVPGGQLEDSRVLKGVMFNKDVVAPGKMRRKI--- 233 (557)
Q Consensus 157 ~l~sK~~~~~~~~ls~li~~a~~~v~~~~~~g~~~~d~~~~I~I~~~~G~~~~ds~li~Giv~~~~~~~~~~~~~~~--- 233 (557)
+++||+.+.+.++|++++++|+..+... ....+|++ +|+|++++|+++++|++++|++|++++.+| .|++.+
T Consensus 187 Sl~sK~i~~~~d~la~l~vdAV~~V~~~---~~~~~d~~-~I~I~k~~Ggs~~ds~lveGmv~dk~~~sp-~m~~~~~~~ 261 (562)
T 3p9d_E 187 SLGSKIVSKDHDRFAEMAVEAVINVMDK---DRKDVDFD-LIKMQGRVGGSISDSKLINGVILDKDFSHP-QMPKCVLPK 261 (562)
T ss_dssp HHSSSTTTTTHHHHHHHHHHHHHTSSTT---TCSCCCCC-CCEEEEESSSCGGGCEEESSEEESSCCCTT-SCCC-----
T ss_pred hcCCchhHHHHHHHHHHHHHHheeeccc---ccCCCCcc-cEEEEEecCCChhhhceeeeEEEecCCCCC-CcCcccccc
Confidence 9999999999999999999999998742 12356764 699999999999999999999999999999 899998
Q ss_pred ---CCceEEEEecCCccccccccceEEecCHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEeCCCCCHHHHHHHHHcCCe
Q 008712 234 ---VNPRIILLDSPLEYKKGENQTNAELVKEEDWEVLLKMEEEYIENLCMQILKFKPDLVITEKGLSDLACHYLSKAGVS 310 (557)
Q Consensus 234 ---~n~kIll~~~~Le~~k~~~~~~~~i~~~~~l~~~~~~E~~~i~~~l~~i~~~~~~lIi~~~~i~~~al~~L~~~~I~ 310 (557)
+|++|++++++|++.+.+.++++.+++++++..+.+.|+++++++++++++.|++|||++++|++++++||.++||+
T Consensus 262 ~~~~~~kIall~~~le~~k~~~~~~~~Iss~~~~~~~~~~E~~~l~~~lekI~~~g~~vvI~~~~I~~~Al~~L~~~~I~ 341 (562)
T 3p9d_E 262 EGSDGVKLAILTCPFEPPKPKTKHKLDISSVEEYQKLQTYEQDKFKEMIDDVKKAGADVVICQWGFDDEANHLLLQNDLP 341 (562)
T ss_dssp TTCSSCEECEEESCCSSCCCSSCCCCCCCSSSHHHHHHHHHHHHHHHHHHHHHHHTCSCCEECSSCCSHHHHHHHTTTCC
T ss_pred cccccceEEEecccccccccccCceEEECCHHHHHHHHHHHHHHHHHHHHHHHHcCCcEEEEeCCCCHHHHHHHHHCCCE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEecCChhHHHHHHHHhCCeeccCCCCCCCCCcCCccceEEEEEECC--eEEEEEEecCCCCeEEEEEccCCHHHHHHHH
Q 008712 311 AIRRLRKTDNNRIAKACGAVIVNRPDELQESDVGTGAGLFEVKKIGD--EFFAFIVDCKDPKACTVLLRGASKDLLNEVE 388 (557)
Q Consensus 311 ~i~~v~~~~l~~i~~~tG~~ii~~~~~l~~~~lG~~~~~v~~~~ig~--~~~~~l~~~~~~~~~TIll~G~t~~~l~e~~ 388 (557)
+++++++.+|+|||++|||+++++++++++++||+ |+.|++.++|+ ++|++|+||.+++.|||+|||+|+.+++|+|
T Consensus 342 ~v~~v~k~~le~ia~~TGa~iis~l~~l~~~~LG~-a~~v~~~~ig~~~~~~~~i~g~~~~~~~TIllrG~te~~l~E~k 420 (562)
T 3p9d_E 342 AVRWVGGQELEHIAISTNGRIVPRFQDLSKDKLGT-CSRIYEQEFGTTKDRMLIIEQSKETKTVTCFVRGSNKMIVDEAE 420 (562)
T ss_dssp CEECCCTTTHHHHHHHHCCCEEESSSCCCTTSCEE-CSCEEEECCSSSSCCEEEECCCSCCSCCEEEEECTTTTTHHHHT
T ss_pred EEeccCHHHHHHHHHHhCCEEEeccccCCHHHCCc-ceEEEEEEeccCCceEEEEecCCCCCeEEEEEeCCCHHHHHHHH
Confidence 99999999999999999999999999999999999 99999999985 8999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhCCCcccCCCchHHHHHHHHHhhhccCCCccchHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHH
Q 008712 389 RNLQDAMSVARNIIKNPKLVPGGGATELTVSATLKQKSSSIEGIEKWPYEAAAIAFEAIPRTLAQNCGINVIRTMTALQG 468 (557)
Q Consensus 389 ~~l~dal~~~~~~~~~g~vvpGGG~~E~~l~~~L~~~~~~~~~~~~~~~~~~a~aL~~ip~~L~~NaG~d~~~~~~~l~~ 468 (557)
|+++|||+++|+++++|++|||||++|++|+.+|++++.+.++++|+++++|++||+.||++|++|||+|+.+++.+|+.
T Consensus 421 r~i~DAL~~~r~av~~g~iVpGGGa~e~~~s~~L~~~~~~~~g~eq~~i~~~a~ALe~ip~~La~NaG~d~~~vv~~l~~ 500 (562)
T 3p9d_E 421 RALHDSLCVVRNLVKDSRVVYGGGAAEVTMSLAVSEEADKQRGIDQYAFRGFAQALDTIPMTLAENSGLDPIGTLSTLKS 500 (562)
T ss_dssp HHHHHHHHHHHHHHHSCCEEETTTHHHHHHHHHHHHHHHTTCTTHHHHHHHHHHHHTHHHHHHHHTTTSCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCCcCCCCcHHHHHHHHHHHHHhccCccHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHH
Confidence 99999999999999999999999999999999999998888999999999999999999999999999999999999999
Q ss_pred HHhCCCCceeeEeCCCCccccccccccccchHHHHHHHHHHHHHHHHHHhhhHhhcCCccC
Q 008712 469 KHANGENAWIGIDGNTGAISDMKERKIWDAYNVKAQTFKTAIEAACMLLRIDDIVSGIKKK 529 (557)
Q Consensus 469 ~~~~~~~~~~Gid~~~~~i~d~~~~gI~dp~~vk~~~l~~A~e~a~~lL~iD~ii~~~~~~ 529 (557)
.|..+.+.++|||+.+|++.||.+.|||||+.||+++|+.|+|+|++|||||++|...+++
T Consensus 501 ~h~~~~~~~~G~d~~~g~~~dm~~~gI~dp~~vk~~al~~A~e~a~~iL~iD~ii~~~~~~ 561 (562)
T 3p9d_E 501 KQLKEKISNIGVDCLGYGSNDMKELFVVDPFIGKKQQILLATQLCRMILKIDNVIISGKDE 561 (562)
T ss_dssp HHHHTTTSSBCCBTTTTBCCBTTTTTCEEEHHHHHHHHHHHHHHHHHHHTEEEEEECCC--
T ss_pred HHhhcCCCceeEecCCCcccchHhccCEEcHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCC
Confidence 9875444789999999999999999999999999999999999999999999999876543
No 18
>3p9d_H T-complex protein 1 subunit theta; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_h* 4d8q_H* 4d8r_h*
Probab=100.00 E-value=2.1e-110 Score=909.27 Aligned_cols=519 Identities=27% Similarity=0.462 Sum_probs=479.2
Q ss_pred ccccccccccccc-HHHHHHHHHHHHHHHHHhhhcCCCCCCceeeecCCCCEEEeccHHHHhhcccccChHHHHHHHHHH
Q 008712 5 VLVLKDSLKRESG-TKVHHANIQASKAVADIIRTTLGPRSMLKMLLDASGGIVVTNDGNAILRELDVAHPAAKSMIELSR 83 (557)
Q Consensus 5 ~~~~~~~~~~~~g-~~~~~~~~~~~~~l~~~v~sslGP~G~~k~i~~~~g~~~iTnDG~tIlk~l~~~hP~a~ll~~~~~ 83 (557)
..+|++|++.++| .++|.+|+.||+.|+++|+|||||+||+|||+++.|+++|||||+|||++|+++||+|+|++++|+
T Consensus 11 ~~~l~~~~~~~~g~~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~G~~~ITnDG~TIlk~i~v~hP~Akll~e~a~ 90 (568)
T 3p9d_H 11 AGLFKQGYNSYSNADGQIIKSIAAIRELHQMCLTSMGPCGRNKIIVNHLGKIIITNDAATMLRELDIVHPAVKVLVMATE 90 (568)
T ss_dssp CSSCCSSCCBCCCHHHHHHHHHHHHHHHHHHHHTTSSSSSCEEEEECTTSCEEEESCHHHHTTTCCCCCHHHHHHHHHHH
T ss_pred hhhhhcCccccccHHHHHHHHHHHHHHHHHHHHhccCCCCCeEEEEcCCCCeEEeCCHHHHHHHcccCCHHHHHHHHHHH
Confidence 4688999999999 579999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhccccCChhHHHHHHHHHHHHHHHHHhcCCChhhHHHHHHHHHHHHHHHHhhccccc--CCCCHHHHHHHHHHHhhcc
Q 008712 84 TQDEEVGDGTTSVIVLAGEMLHVAEEFIDKNYHPTVICRAYNKALEDAVAVLDKIAMPI--DTNDRATMLGLVKSCIGTK 161 (557)
Q Consensus 84 ~~~~~~GDGttt~viLa~~Ll~~~~~li~~gi~p~~I~~g~~~a~~~~~~~L~~~s~~v--~~~~~~~l~~ia~t~l~sK 161 (557)
+|++++||||||++||+++||+++.+++++|+||..|++||++|++.++++|+++++++ +..+++.|.++++|+++||
T Consensus 91 ~qd~e~GDGTTtvvvLa~~Ll~~a~~ll~~GihP~~I~~G~~~A~~~a~e~L~~~a~~v~~~~~~~~~l~~va~tsl~sK 170 (568)
T 3p9d_H 91 QQKIDMGDGTNLVMILAGELLNVSEKLISMGLSAVEIIQGYNMARKFTLKELDEMVVGEITDKNDKNELLKMIKPVISSK 170 (568)
T ss_dssp HHHTTSSSCHHHHHHHHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHCCSCCCCCCTTHHHHHHHHHHHTTT
T ss_pred hhhceeCCCceehHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhccccCCCCCCHHHHHHHHHHHhhcc
Confidence 99999999999999999999999999999999999999999999999999999999876 4456889999999999999
Q ss_pred cccchhHHHHHHHHHHHhhcccccC--CCccccCcccceEEEEecCCCCCCcEEEEeEEEeccccCCCCCccccC---Cc
Q 008712 162 FTSQFGDLIADLAIDATTTVGVDLG--QGLREVDIKKYIKVEKVPGGQLEDSRVLKGVMFNKDVVAPGKMRRKIV---NP 236 (557)
Q Consensus 162 ~~~~~~~~ls~li~~a~~~v~~~~~--~g~~~~d~~~~I~I~~~~G~~~~ds~li~Giv~~~~~~~~~~~~~~~~---n~ 236 (557)
+.+++ ++|++++++|+.+++++.. .+...+|++ +|+|++++|++++||++++|++|++++. .|+++++ ||
T Consensus 171 ~~~~~-~~i~~livdAv~~V~~~~~~~~~~~~~dl~-~I~I~k~~Ggs~~dS~lv~G~v~dk~~~---~m~~~i~~~~n~ 245 (568)
T 3p9d_H 171 KYGSE-DILSELVSEAVSHVLPVAQQAGEIPYFNVD-SIRVVKIMGGSLSNSTVIKGMVFNREPE---GHVKSLSEDKKH 245 (568)
T ss_dssp STTCH-HHHHHHHHHHHTTSCC---------CCCGG-GCEEEEEESSCGGGCEEESSCCBSSCBS---SGGGSCCCCSSC
T ss_pred CcchH-HHHHHHHHHHHHHHhhccccccCCcccccc-eEEEEEccCCCcchheeeccEEEeeccc---CCcEEEecCCcc
Confidence 98877 9999999999999985310 122357775 6999999999999999999999999874 6899999 99
Q ss_pred eEEEEecCCccccccccceEEecCHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEeCCCCCHHHHHHHHHcCCeEEecCC
Q 008712 237 RIILLDSPLEYKKGENQTNAELVKEEDWEVLLKMEEEYIENLCMQILKFKPDLVITEKGLSDLACHYLSKAGVSAIRRLR 316 (557)
Q Consensus 237 kIll~~~~Le~~k~~~~~~~~i~~~~~l~~~~~~E~~~i~~~l~~i~~~~~~lIi~~~~i~~~al~~L~~~~I~~i~~v~ 316 (557)
||++++++|+++++++++++.+++++++.+++++|++++++++++|++.|++|||++++|++.+++||.++||+++++++
T Consensus 246 kIlll~~~Le~~k~e~~~~v~i~~~~~l~~~~~~E~~~l~~~v~~I~~~g~~vvi~~~~I~~~al~~L~~~gI~av~~v~ 325 (568)
T 3p9d_H 246 KVAVFTCPLDIANTETKGTVLLHNAQEMLDFSKGEEKQIDAMMKEIADMGVECIVAGAGVGELALHYLNRYGILVLKVPS 325 (568)
T ss_dssp EEEEECSCSSSCCCSSSCEEECCSHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEECSCCCHHHHHHHHHHTCEEECCCC
T ss_pred eEEEEccCccccccccCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhcCCeEEEECCCcChHHHHHHHHCCeEEEecCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhHHHHHHHHhCCeeccCCCCCCCCCcCCccceEEEEEECCeEEEEEEecC--CCCeEEEEEccCCHHHHHHHHHHHHHH
Q 008712 317 KTDNNRIAKACGAVIVNRPDELQESDVGTGAGLFEVKKIGDEFFAFIVDCK--DPKACTVLLRGASKDLLNEVERNLQDA 394 (557)
Q Consensus 317 ~~~l~~i~~~tG~~ii~~~~~l~~~~lG~~~~~v~~~~ig~~~~~~l~~~~--~~~~~TIll~G~t~~~l~e~~~~l~da 394 (557)
+.+|+|||++||++++++++++++++||+ |+.|++.++|+++|++|++|+ ++++|||+|||+|+.+++|.||+++||
T Consensus 326 ~~~leria~~tGa~ivs~l~~l~~~~LG~-a~~v~~~~ig~~~~~~~~g~~~l~~~~~TIllrG~t~~~l~E~er~i~DA 404 (568)
T 3p9d_H 326 KFELRRLCRVCGATPLPRLGAPTPEELGL-VETVKTMEIGGDRVTVFKQEQGEISRTSTIILRGATQNNLDDIERAIDDG 404 (568)
T ss_dssp HHHHHHHHHHHSCCCCSSSSCCCGGGCEE-CSCCCCCEETTEECBCCCCCSSSCCSSCEEEEEESCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCEEEeccccCCHHHCCc-ceEEEEEEecCceEEEEecCCCCCCCeEEEEECCCcHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999 999999999999999999998 789999999999999999999999999
Q ss_pred HHHHHHHHh--CCCcccCCCchHHHHHHHHHhhhccCCCccchHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHhC
Q 008712 395 MSVARNIIK--NPKLVPGGGATELTVSATLKQKSSSIEGIEKWPYEAAAIAFEAIPRTLAQNCGINVIRTMTALQGKHAN 472 (557)
Q Consensus 395 l~~~~~~~~--~g~vvpGGG~~E~~l~~~L~~~~~~~~~~~~~~~~~~a~aL~~ip~~L~~NaG~d~~~~~~~l~~~~~~ 472 (557)
|+++|++++ ++++|||||++|++|+.+|++++.+.++++|+++++|++||+.||++|++|||+|+.+++.+|+..|..
T Consensus 405 L~vvr~av~~~d~~iVpGGGa~E~~ls~~L~~~a~~~~g~eq~~i~~fa~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~ 484 (568)
T 3p9d_H 405 VAAVKGLMKPSGGKLLPGAGATEIELISRITKYGERTPGLLQLAIKQFAVAFEVVPRTLAETAGLDVNEVLPNLYAAHNV 484 (568)
T ss_dssp HHHHHHTTSTTCCCCCCTTTHHHHHHHHHHHHHHHTCCSTHHHHHHHHHHGGGHHHHHHHHHHTCCHHHHHHHHHHCCCC
T ss_pred HHHHHHHhcccCCeEEeCCcHHHHHHHHHHHHHhccCCcHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHhhh
Confidence 999999999 888999999999999999999998899999999999999999999999999999999999999998865
Q ss_pred -------CCCceeeEeCCCCc---cccccccccccchHHHHHHHHHHHHHHHHHHhhhHhhcCCccC
Q 008712 473 -------GENAWIGIDGNTGA---ISDMKERKIWDAYNVKAQTFKTAIEAACMLLRIDDIVSGIKKK 529 (557)
Q Consensus 473 -------~~~~~~Gid~~~~~---i~d~~~~gI~dp~~vk~~~l~~A~e~a~~lL~iD~ii~~~~~~ 529 (557)
+.++++|||+.+|+ +.||.+.|||||+.||+++|+.|+|+|++|||||++|...|..
T Consensus 485 ~~~~~~~~~~~~~G~d~~~g~~~~~~d~~~~gI~dp~~vk~~al~~A~e~a~~iL~iD~ii~~~~~~ 551 (568)
T 3p9d_H 485 TEPGAVKTDHLYKGVDIDGESDEGVKDIREENIYDMLATKKFAINVATEAATTVLSIDQIIMAKKAG 551 (568)
T ss_dssp SSCCCCCCTTSSSCCCHHHHTCCCCHHHHHHHHHHHHHHHHHHHHCCEECBCCC-------------
T ss_pred hcccccccCCCceeEcccCCCcccccChHHccCEEcHHHHHHHHHHHHHHHHHHHhHHHHhhccccC
Confidence 12367999999997 9999999999999999999999999999999999999887653
No 19
>3p9d_B T-complex protein 1 subunit beta; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_b* 4d8q_B* 4d8r_b*
Probab=100.00 E-value=2.8e-110 Score=903.62 Aligned_cols=517 Identities=31% Similarity=0.480 Sum_probs=488.3
Q ss_pred CcccccccccccccHHHHHHHHHHHHHHHHHhhhcCCCCCCceeeec-CCCCEEEeccHHHHhhcccccChHHHHHHHHH
Q 008712 4 PVLVLKDSLKRESGTKVHHANIQASKAVADIIRTTLGPRSMLKMLLD-ASGGIVVTNDGNAILRELDVAHPAAKSMIELS 82 (557)
Q Consensus 4 ~~~~~~~~~~~~~g~~~~~~~~~~~~~l~~~v~sslGP~G~~k~i~~-~~g~~~iTnDG~tIlk~l~~~hP~a~ll~~~~ 82 (557)
.+.+|+++.+..+|.++|.+|+.||+.|+++|++||||+||+|||++ +.|+++|||||+||||+|+++||+|+|++++|
T Consensus 2 ~~~~l~~~~~~~~g~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~~G~~~iTnDG~tIlk~i~~~hP~Akll~e~a 81 (527)
T 3p9d_B 2 SVQIFGDQVTEERAENARLSAFVGAIAVGDLVKSTLGPKGMDKLLQSASSNTCMVTNDGATILKSIPLDNPAAKVLVNIS 81 (527)
T ss_dssp -CCSSCSCEEEEESHHHHHHHHHHHHHHHHHHHSCSSSSCCEEEEECTTTCCEECCCCHHHHHHTCCCCCHHHHHHHHHH
T ss_pred ceehhcCcchhhhhHHHHHHHHHHHHHHHHHHHhccCCCCCeEEEEecCCCCeEEeCCHHHHHHHhccCCHHHHHHHHHH
Confidence 34578999999999999999999999999999999999999999999 89999999999999999999999999999999
Q ss_pred HhhhccccCChhHHHHHHHHHHHHHHHHHhc-CCChhhHHHHHHHHHHHHHHHHhhcccccCCCC---HHHHHHHHHHHh
Q 008712 83 RTQDEEVGDGTTSVIVLAGEMLHVAEEFIDK-NYHPTVICRAYNKALEDAVAVLDKIAMPIDTND---RATMLGLVKSCI 158 (557)
Q Consensus 83 ~~~~~~~GDGttt~viLa~~Ll~~~~~li~~-gi~p~~I~~g~~~a~~~~~~~L~~~s~~v~~~~---~~~l~~ia~t~l 158 (557)
++|++++||||||++|||++||+++.+++++ |+||..|++||++|++.++++|++++++++..+ ++.|.++|+|++
T Consensus 82 ~~qd~~~GDGTTtavVLA~~Ll~ea~~lv~~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~~~~~~~~l~~vA~tSl 161 (527)
T 3p9d_B 82 KVQDDEVGDGTTSVTVLSAELLREAEKLIDQSKIHPQTIIEGYRLASAAALDALTKAAVDNSHDKTMFREDLIHIAKTTL 161 (527)
T ss_dssp HHHHHHTCSCTTTTTHHHHHHHHHHHHHTC---CCHHHHHHHHHHHHHHHHHHHHHTCBCCCCCHHHHHHHHHHHHHHHH
T ss_pred HHhHhhhCCcHhHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHhCccCCCcchhhHHHHHHHHHhcc
Confidence 9999999999999999999999999999999 999999999999999999999999999987533 789999999999
Q ss_pred hcccccchhHHHHHHHHHHHhhcccccCCCccccCcccceEEEEecCCCCCCcEEEEeEEEeccccCCCCCccccCCceE
Q 008712 159 GTKFTSQFGDLIADLAIDATTTVGVDLGQGLREVDIKKYIKVEKVPGGQLEDSRVLKGVMFNKDVVAPGKMRRKIVNPRI 238 (557)
Q Consensus 159 ~sK~~~~~~~~ls~li~~a~~~v~~~~~~g~~~~d~~~~I~I~~~~G~~~~ds~li~Giv~~~~~~~~~~~~~~~~n~kI 238 (557)
+||+.+.|+++|++++++|+.+++++ + |++ +|+|+++.|++..+|++++|++|++++.++ . |++++||||
T Consensus 162 ~sK~~~~~~~~i~~li~dAv~~V~~~---~----~~~-~I~V~k~~gg~~~ds~lv~G~~~dk~~~~~-~-p~~~~n~kI 231 (527)
T 3p9d_B 162 SSKILSQDKDHFAELATNAILRLKGS---T----NLE-HIQIIKILGGKLSDSFLDEGFILAKKFGNN-Q-PKRIENAKI 231 (527)
T ss_dssp TTSGGGGGHHHHHHHHHHHHHTTCTT---C----CTT-SSCCCBCCCSSSSCCCEESSCCCSCCCSSS-C-CSCCSSCEE
T ss_pred ccCcccchHHHHHHHHHHHHHHhccc---C----Ccc-eEEEEEcCCCCccccEEEEeEEEecccCCC-C-CeeeecceE
Confidence 99999999999999999999999852 2 222 599999999999999999999999999997 3 889999999
Q ss_pred EEEecCCcccccc-ccceEEecCHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEeCCCCCHHHHHHHHHcCCeEEecCCh
Q 008712 239 ILLDSPLEYKKGE-NQTNAELVKEEDWEVLLKMEEEYIENLCMQILKFKPDLVITEKGLSDLACHYLSKAGVSAIRRLRK 317 (557)
Q Consensus 239 ll~~~~Le~~k~~-~~~~~~i~~~~~l~~~~~~E~~~i~~~l~~i~~~~~~lIi~~~~i~~~al~~L~~~~I~~i~~v~~ 317 (557)
++++++|++++++ ++.++.+++++++..+.+.|++++++++++|++.|++||+++++|++.+++||.++||++++++++
T Consensus 232 lll~~~le~~k~~~~~~~v~i~~~~~l~~~~~~E~~~l~~~l~~I~~~g~~vvi~~~~I~~~al~~L~~~~i~av~~~~~ 311 (527)
T 3p9d_B 232 LIANTTLDTDKVKIFGTKFKVDSTAKLAQLEKAEREKMKNKIAKISKFGINTFINRQLIYDYPEQLFTDLGINSIEHADF 311 (527)
T ss_dssp EEECSCSSCCCCSSCCCBCCCCHHHHHHHHHHHHHHHHHHHHHHHTTTCCBEEESSCCCTTTHHHHHHHTCBCCCCCCHH
T ss_pred EEeccccccccccccCceEEEcCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEECCCCCHHHHHHHHHCCCEEEecCCH
Confidence 9999999999998 688999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHhCCeeccCCCCCCCCCcCCccceEEEEEECCeEEEEEEecCCCCeEEEEEccCCHHHHHHHHHHHHHHHHH
Q 008712 318 TDNNRIAKACGAVIVNRPDELQESDVGTGAGLFEVKKIGDEFFAFIVDCKDPKACTVLLRGASKDLLNEVERNLQDAMSV 397 (557)
Q Consensus 318 ~~l~~i~~~tG~~ii~~~~~l~~~~lG~~~~~v~~~~ig~~~~~~l~~~~~~~~~TIll~G~t~~~l~e~~~~l~dal~~ 397 (557)
.+|+|++++||++++++++++++++||+ |+.|++.++|+++|++|+||+++++|||+|||+|+.+++|+||+++|||++
T Consensus 312 ~dle~ia~~tGa~iv~~~~~~~~~~LG~-a~~v~~~~ig~~~~~~~~g~~~~~~~tI~lrg~te~~l~E~kr~i~DAl~~ 390 (527)
T 3p9d_B 312 EGVERLALVTGGEVVSTFDEPSKCKLGE-CDVIEEIMLGEQPFLKFSGCKAGEACTIVLRGATDQTLDEAERSLHDALSV 390 (527)
T ss_dssp HHHHHHHHHTCCCCCSTTSCCTTSCEEC-SBCCBCCCSSSCCBCCBCSSCCSCCEECBCCTTCTTHHHHHHTHHHHHHHH
T ss_pred HHHHHHHHHhCCEEecchhhCCHHHCCC-CcEEEEEEecceEEEEEECCCCCCEEEEEEcCCCHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999 999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhCCCcccCCCchHHHHHHHHHhhhccCCCccchHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHhCCCCce
Q 008712 398 ARNIIKNPKLVPGGGATELTVSATLKQKSSSIEGIEKWPYEAAAIAFEAIPRTLAQNCGINVIRTMTALQGKHANGENAW 477 (557)
Q Consensus 398 ~~~~~~~g~vvpGGG~~E~~l~~~L~~~~~~~~~~~~~~~~~~a~aL~~ip~~L~~NaG~d~~~~~~~l~~~~~~~~~~~ 477 (557)
+|+++++|++|||||++|++|+.+|++++.+.++++|+++++|++||+.||++|++|||+|+.+++.+|++.|..++ .+
T Consensus 391 ~r~av~~g~iVpGGGa~e~~~s~~L~~~~~~~~g~eq~~i~~~a~ALe~ip~~La~NaG~d~~~vv~~l~~~h~~~~-~~ 469 (527)
T 3p9d_B 391 LSQTTKETRTVLGGGCAEMVMSKAVDTEAQNIDGKKSLAVEAFARALRQLPTILADNAGFDSSELVSKLRSSIYNGI-ST 469 (527)
T ss_dssp HHHHHHCCCEEETTTHHHHHHHHHHHHHHHHHCSHHHHHHHHHHHHHHHHHHHHHHHHTSCSHHHHHHHHHHHHHTC-SC
T ss_pred HHHHHhcCCcccCCcHHHHHHHHHHHHHHhccCcHHHHHHHHHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHhcCC-Cc
Confidence 99999999999999999999999999998888899999999999999999999999999999999999999987664 67
Q ss_pred eeEeCCCCccccccccccccchHHHHHHHHHHHHHHHHHHhhhHhhcCCccCCCC
Q 008712 478 IGIDGNTGAISDMKERKIWDAYNVKAQTFKTAIEAACMLLRIDDIVSGIKKKQAP 532 (557)
Q Consensus 478 ~Gid~~~~~i~d~~~~gI~dp~~vk~~~l~~A~e~a~~lL~iD~ii~~~~~~~~~ 532 (557)
+|||+.+|++.||++.|||||+.||+++|+.|+|+|++|||||++|...|++..+
T Consensus 470 ~G~d~~~g~~~dm~~~gI~dp~~vk~~al~~A~e~a~~iL~id~ii~~~~~~~~~ 524 (527)
T 3p9d_B 470 SGLDLNNGTIADMRQLGIVESYKLKRAVVSSASEAAEVLLRVDNIIRARPRTANR 524 (527)
T ss_dssp CCCCSSSTTCCCHHHHTCEEETTHHHHHHHHHHHHHHHHHHCCEEEEEC------
T ss_pred eeEECCCCCCcchHhccCEEcHHHHHHHHHHHHHHHHHHHhHHHHHhcCCcccCC
Confidence 9999999999999999999999999999999999999999999999988776543
No 20
>3iyg_Q T-complex protein 1 subunit theta; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=2.5e-107 Score=877.73 Aligned_cols=505 Identities=29% Similarity=0.454 Sum_probs=481.7
Q ss_pred cccccccc-HHHHHHHHHHHHHHHHHhhhcCCCCCCceeeecCCCCEEEeccHHHHhhcccccChHHHHHHHHHHhhhcc
Q 008712 10 DSLKRESG-TKVHHANIQASKAVADIIRTTLGPRSMLKMLLDASGGIVVTNDGNAILRELDVAHPAAKSMIELSRTQDEE 88 (557)
Q Consensus 10 ~~~~~~~g-~~~~~~~~~~~~~l~~~v~sslGP~G~~k~i~~~~g~~~iTnDG~tIlk~l~~~hP~a~ll~~~~~~~~~~ 88 (557)
+|++.++| .+++.+|+.||+.|+++|++||||+||+|||+++.|+|+|||||+||||+|+++||+|+|++++|++|+++
T Consensus 1 ~~~~~~~g~~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~G~~~iTnDG~tIlk~i~v~hP~Akll~e~a~~qd~~ 80 (512)
T 3iyg_Q 1 EGAKHFSGLEEAVYRNIQACKELAQTTRTAYGPNGMNKMVINHLEKLFVTNDAATILRELEVQHPAAKMIVMASHMQEQE 80 (512)
T ss_pred CCccccCCHHHHHHHHHHHHHHHHHHHHhccCCCCCeEEEEcCCCCeEEeCCHHHHHHHcccCCHHHHHHHHHHHHhhhh
Confidence 46788999 79999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCChhHHHHHHHHHHHHHHHHHhcCCChhhHHHHHHHHHHHHHHHHhhccc--ccCCCCHHHHHHHHHHHhhcccccch
Q 008712 89 VGDGTTSVIVLAGEMLHVAEEFIDKNYHPTVICRAYNKALEDAVAVLDKIAM--PIDTNDRATMLGLVKSCIGTKFTSQF 166 (557)
Q Consensus 89 ~GDGttt~viLa~~Ll~~~~~li~~gi~p~~I~~g~~~a~~~~~~~L~~~s~--~v~~~~~~~l~~ia~t~l~sK~~~~~ 166 (557)
+||||||++|||++||+++.+++++|+||..|++||++|++.++++|+++++ +.+..+++.|.++|+|+++||+.+ +
T Consensus 81 ~GDGTTtvvVLA~~Ll~~a~~lv~~GihP~~I~~G~~~A~~~a~~~L~~~~~~~~~~~~~~~~l~~va~tsl~sK~~~-~ 159 (512)
T 3iyg_Q 81 VGDGTNFVLVFAGALLELAEELLRLGLSVSEVIEGYEIACKKAHEILPDLVCCSAKNLRDVDEVSSLLHTSVMSKQYG-N 159 (512)
T ss_pred hCCChhHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCHHHHHHHHHHHhCCCCcc-c
Confidence 9999999999999999999999999999999999999999999999999854 445457899999999999999865 6
Q ss_pred hHHHHHHHHHHHhhcccccCCCccccCcccceEEEEecCCCCCCcEEEEeEEEeccccCCCCCccccCCceEEEEecCCc
Q 008712 167 GDLIADLAIDATTTVGVDLGQGLREVDIKKYIKVEKVPGGQLEDSRVLKGVMFNKDVVAPGKMRRKIVNPRIILLDSPLE 246 (557)
Q Consensus 167 ~~~ls~li~~a~~~v~~~~~~g~~~~d~~~~I~I~~~~G~~~~ds~li~Giv~~~~~~~~~~~~~~~~n~kIll~~~~Le 246 (557)
+++|++++++|+.+++++ ++ .+|++ +|+|.+.+|+++.+|++++|++|++++.+ |+++++|++|++++++++
T Consensus 160 ~~~i~~livdAv~~V~~~--~~--~i~v~-~I~i~k~~Ggs~~ds~lv~G~~~dk~~~~---~~~~~~n~kI~ll~~~le 231 (512)
T 3iyg_Q 160 EVFLAKLIAQACVSIFPD--SG--HFNVD-NIRVCKILGSGVHSSSVLHGMVFKKETEG---DVTSVKDAKIAVYSCPFD 231 (512)
T ss_pred hHHHHHHHHHHHHHHhcc--CC--cccHh-HeeEeeccCCCcccceEEeeEEEecCcCC---CCcccccCceEEEecccc
Confidence 899999999999999852 22 46665 59999999999999999999999999864 899999999999999999
Q ss_pred cccccccceEEecCHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEeCCCCCHHHHHHHHHcCCeEEecCChhHHHHHHHH
Q 008712 247 YKKGENQTNAELVKEEDWEVLLKMEEEYIENLCMQILKFKPDLVITEKGLSDLACHYLSKAGVSAIRRLRKTDNNRIAKA 326 (557)
Q Consensus 247 ~~k~~~~~~~~i~~~~~l~~~~~~E~~~i~~~l~~i~~~~~~lIi~~~~i~~~al~~L~~~~I~~i~~v~~~~l~~i~~~ 326 (557)
+.+++.+.++.+++++++.++.+.|+++++++++++++.|++||+++++|++.+++||.++||++++++++.+|+||+++
T Consensus 232 ~~~~e~k~~v~Is~~~~l~~~~~~E~~~l~~~v~~I~~~g~~vvi~~~~I~~la~~~l~k~~I~av~~~~~~dle~ia~~ 311 (512)
T 3iyg_Q 232 GMITETKGTVLIKSAEELMNFSKGEENLMDAQVKAIADTGANVVVTGGRVADMALHYANKYNIMLVRLNSKWDLRRLCKT 311 (512)
T ss_pred cccccccceEEeCCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEECCCccHHHHHHHHHCCeEEEEeCCHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hCCeeccCCCCCCCCCcCCccceEEEEEECCeEEEEEEecC-CCCeEEEEEccCCHHHHHHHHHHHHHHHHHHHHHHhCC
Q 008712 327 CGAVIVNRPDELQESDVGTGAGLFEVKKIGDEFFAFIVDCK-DPKACTVLLRGASKDLLNEVERNLQDAMSVARNIIKNP 405 (557)
Q Consensus 327 tG~~ii~~~~~l~~~~lG~~~~~v~~~~ig~~~~~~l~~~~-~~~~~TIll~G~t~~~l~e~~~~l~dal~~~~~~~~~g 405 (557)
||++++++++++++++||+ |+.|++.++|+++|++|++|+ .+++|||+|||+|+.+++|.||+++|||+++|+++++|
T Consensus 312 tGa~iis~l~~~~~~~LG~-a~~v~~~~~g~~~~~~~~~~~~~~~~~tI~lrG~te~~l~E~kr~i~DAl~~~r~a~~~~ 390 (512)
T 3iyg_Q 312 VGATALPRLNPPVLEEMGH-CDSVYLSEVGDTQVVVFKHEKEDGAISTIVLRGSTDNLMDDIERAVDDGVNTFKVLTRDK 390 (512)
T ss_pred hCCEEecccccCCHHHCCc-ccEEEEEEeCCeEEEEEEcccCCCceEEEEECCCcHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 9999999999999999999 999999999999999999996 58899999999999999999999999999999999999
Q ss_pred CcccCCCchHHHHHHHHHhhhccCCCccchHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHhCCCCceeeEeCCCC
Q 008712 406 KLVPGGGATELTVSATLKQKSSSIEGIEKWPYEAAAIAFEAIPRTLAQNCGINVIRTMTALQGKHANGENAWIGIDGNTG 485 (557)
Q Consensus 406 ~vvpGGG~~E~~l~~~L~~~~~~~~~~~~~~~~~~a~aL~~ip~~L~~NaG~d~~~~~~~l~~~~~~~~~~~~Gid~~~~ 485 (557)
++|||||++|++|+.+|++++.+.++++|+++++|++||+.||++|++|||+|+.+++.+|+..|..++ .++|||+.+|
T Consensus 391 ~iVpGGGa~e~~~s~~L~~~~~~~~g~eq~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~-~~~G~d~~~~ 469 (512)
T 3iyg_Q 391 RLVPGGGATEIELAKQITSYGETCPGLEQYAIKKFAEAFEAIPRALAENSGVKANEVISKLYAVHQEGN-KNVGLDIEAE 469 (512)
T ss_pred CEecCCcHHHHHHHHHHHHHhccCCcHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHhcCC-CcEEEecCCC
Confidence 999999999999999999998888999999999999999999999999999999999999999998765 7899999965
Q ss_pred --ccccccccccccchHHHHHHHHHHHHHHHHHHhhhHhhcC
Q 008712 486 --AISDMKERKIWDAYNVKAQTFKTAIEAACMLLRIDDIVSG 525 (557)
Q Consensus 486 --~i~d~~~~gI~dp~~vk~~~l~~A~e~a~~lL~iD~ii~~ 525 (557)
++.||++.|||||+.||+++|+.|+|+|++|||||++|..
T Consensus 470 ~g~~~d~~~~gI~dp~~vk~~al~~A~~~a~~iL~id~ii~~ 511 (512)
T 3iyg_Q 470 VPAVKDMLEAGVLDTYLGKYWAIKLATNAAVTVLRVDQIIMA 511 (512)
T ss_pred CCcccchHhccCeEcHHHHHHHHHHHHHHHHHHHhHhHheec
Confidence 9999999999999999999999999999999999999974
No 21
>3p9d_F T-complex protein 1 subunit zeta; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_f* 4d8q_F* 4d8r_f*
Probab=100.00 E-value=1.1e-109 Score=901.77 Aligned_cols=518 Identities=25% Similarity=0.477 Sum_probs=490.9
Q ss_pred CcccccccccccccHHHHHHHHHHHHHHHHHhhhcCCCCCCceeeecCCCCEEEeccHHHHhhcccccChHHHHHHHHHH
Q 008712 4 PVLVLKDSLKRESGTKVHHANIQASKAVADIIRTTLGPRSMLKMLLDASGGIVVTNDGNAILRELDVAHPAAKSMIELSR 83 (557)
Q Consensus 4 ~~~~~~~~~~~~~g~~~~~~~~~~~~~l~~~v~sslGP~G~~k~i~~~~g~~~iTnDG~tIlk~l~~~hP~a~ll~~~~~ 83 (557)
.+.+++++.+..+|.+++.+|+.||+.|+++|+|||||+||+|||+++.|+++|||||+|||++|+++||+|+|++++|+
T Consensus 2 ~~~~~~~~~~~~~g~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~G~~~iTnDG~tIlk~i~v~hP~akll~e~a~ 81 (546)
T 3p9d_F 2 SLQLLNPKAESLRRDAALKVNVTSAEGLQSVLETNLGPKGTLKMLVDGAGNIKLTKDGKVLLTEMQIQSPTAVLIARAAA 81 (546)
T ss_dssp CCCSSCTTEEEEEHHHHHHHHHHHHTHHHHHHTTTSSTTCCEEEEECTTSCEEEECCHHHHHHTSCCCCHHHHHHHHHHH
T ss_pred cccccCCCcchhhHHHHHHHHHHHHHHHHHHHHhccCCCCCeEEEECCCCCEEEECCHHHHHHHccCcCHHHHHHHHHHH
Confidence 34567888899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhccccCChhHHHHHHHHHHHHHHHHHhcCCChhhHHHHHHHHHHHHHHHHhhcccccCC--CCHHHHHHHHHHHhhcc
Q 008712 84 TQDEEVGDGTTSVIVLAGEMLHVAEEFIDKNYHPTVICRAYNKALEDAVAVLDKIAMPIDT--NDRATMLGLVKSCIGTK 161 (557)
Q Consensus 84 ~~~~~~GDGttt~viLa~~Ll~~~~~li~~gi~p~~I~~g~~~a~~~~~~~L~~~s~~v~~--~~~~~l~~ia~t~l~sK 161 (557)
+|++++||||||++|||++||+++.+++++|+||..|++||++|++.++++|++++++++. .+++.|.++|+|+++||
T Consensus 82 ~qd~e~GDGTTtvvVLA~eLL~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~a~~v~~~~~~~~~L~~vA~tsl~sK 161 (546)
T 3p9d_F 82 AQDEITGDGTTTVVCLVGELLRQAHRFIQEGVHPRIITDGFEIARKESMKFLDEFKISKTNLSNDREFLLQVARSSLLTK 161 (546)
T ss_dssp HHHHHCSSCHHHHHHHHHHHHHHHHHHTTTTBCHHHHHHHHHHHHHHHHHHHHHHCCCCSSSSTTCHHHHHHHHHHTCST
T ss_pred HHHHHhCCCcccHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHhhccccccccCHHHHHHHHHHHhCCC
Confidence 9999999999999999999999999999999999999999999999999999999998864 46789999999999999
Q ss_pred cccchhHHHHHHHHHHHhhcccccCCCccccCcccceEEEEecCCCCCCcEEEEeEEEeccccCCCCCccccCCceEEEE
Q 008712 162 FTSQFGDLIADLAIDATTTVGVDLGQGLREVDIKKYIKVEKVPGGQLEDSRVLKGVMFNKDVVAPGKMRRKIVNPRIILL 241 (557)
Q Consensus 162 ~~~~~~~~ls~li~~a~~~v~~~~~~g~~~~d~~~~I~I~~~~G~~~~ds~li~Giv~~~~~~~~~~~~~~~~n~kIll~ 241 (557)
+.+.+.++|++++++|+..+... ++ ..+|++ +|+|++++|++..||++++|++|++++.+| .|+++++||||+++
T Consensus 162 i~~~~~d~la~l~vdaV~~V~~~--~~-~~~dl~-~I~i~ki~Gg~~~ds~lv~G~v~dk~~~~~-~m~~~~en~kIll~ 236 (546)
T 3p9d_F 162 VDADLTEVLTPIVTDAVLSVYDA--QA-DNLDLH-MVEIMQMQHLSPKDTTFIKGLVLDHGGRHP-DMPTRVKNAYVLIL 236 (546)
T ss_dssp THHHHCSSHHHHHHHHHHHTHHH--HH-TTCCGG-GEEEECCCCSCTTTCCCCSSCEESCCCCSS-SSCSSBCSCCCCEE
T ss_pred cchhHHHHHHHHHHHhheEeecC--CC-Ccccch-heEEEEecCCCccccEEEeeEEEecccccc-cCcceecCceEEEe
Confidence 99899999999999999998632 11 256775 699999999999999999999999999999 89999999999999
Q ss_pred ecCCccccccccceEEecCHHHHHHHHHHHHHHHHHHHHHHHhcC----------CcEEEeCCCCCHHHHHHHHHcCCeE
Q 008712 242 DSPLEYKKGENQTNAELVKEEDWEVLLKMEEEYIENLCMQILKFK----------PDLVITEKGLSDLACHYLSKAGVSA 311 (557)
Q Consensus 242 ~~~Le~~k~~~~~~~~i~~~~~l~~~~~~E~~~i~~~l~~i~~~~----------~~lIi~~~~i~~~al~~L~~~~I~~ 311 (557)
+|+|+++++++++++.+++++++..+++.|++++++++++|...+ ++|||++++|++.+++||.++||++
T Consensus 237 ~~~Le~~k~e~~~~~~i~~~~~~~~~~~~E~~~~~~~v~~I~~~~~~v~~~~~g~~~vIi~~k~I~~~Al~~L~~~gI~~ 316 (546)
T 3p9d_F 237 NVSLEYEKTEVNSGFFYSSADQRDKLAASERKFVDAKLKKIIDLKNEVCGMDPDKGFVIINQKGIDPMSLDVFAKHNILA 316 (546)
T ss_dssp CCCSSSCCCSSCBCCCCCSSSCHHHHHHHHHHHHHHHHHHHHHCC-----------CEEEESSCCCHHHHHHHTTTTCEE
T ss_pred cCcccccccccCceEEEcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCceEEEecCcCcHHHHHHHHHCCCee
Confidence 999999999999999999999999999999999999999998754 3499999999999999999999999
Q ss_pred EecCChhHHHHHHHHhCCeeccCCCCCCCCCcCCccceEEEEEECCeEEEEEEecCCCCeEEEEEccCCHHHHHHHHHHH
Q 008712 312 IRRLRKTDNNRIAKACGAVIVNRPDELQESDVGTGAGLFEVKKIGDEFFAFIVDCKDPKACTVLLRGASKDLLNEVERNL 391 (557)
Q Consensus 312 i~~v~~~~l~~i~~~tG~~ii~~~~~l~~~~lG~~~~~v~~~~ig~~~~~~l~~~~~~~~~TIll~G~t~~~l~e~~~~l 391 (557)
++++++.+|+||+++||++++++++++++++||+ |+.|++.++|+++|++|+||++++.|||+|||+|+.+++|+||++
T Consensus 317 vr~v~~~~leria~~tGa~ii~~l~~l~~~~LG~-a~~v~~~~ig~~~~~~i~g~~~~~~~tI~lrG~te~~l~E~kr~l 395 (546)
T 3p9d_F 317 LRRAKRRNMERLQLVTGGEAQNSVEDLSPQILGF-SGLVYQETIGEEKFTYVTENTDPKSCTILIKGSTHYALAQTKDAV 395 (546)
T ss_dssp ECCCCHHHHHHHHHTTTBCCCCCCSSCSTTCCBC-CCCBCBCCCSSCCCEECSSCSCCSCEEEECCCSCHHHHHHHHHHH
T ss_pred EecCCHHHHHHHHHHhCCEEecchhhCCHhHCCc-ccEEEEEEecCceEEEEecCCCCceEEEEECCCCHHHHHHHHHHH
Confidence 9999999999999999999999999999999999 999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhCCCcccCCCchHHHHHHHHHh---hhccCCCccchHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHH
Q 008712 392 QDAMSVARNIIKNPKLVPGGGATELTVSATLKQ---KSSSIEGIEKWPYEAAAIAFEAIPRTLAQNCGINVIRTMTALQG 468 (557)
Q Consensus 392 ~dal~~~~~~~~~g~vvpGGG~~E~~l~~~L~~---~~~~~~~~~~~~~~~~a~aL~~ip~~L~~NaG~d~~~~~~~l~~ 468 (557)
+|||+++|+++++|++|||||++|++|+.+|++ ++...++++|+++++|++||+.||++|++|||+|+.+++.+|+.
T Consensus 396 ~DAl~~~r~av~~~~iVpGGGa~e~~~s~~L~~~~~~~~~~~g~eq~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~ 475 (546)
T 3p9d_F 396 RDGLRAVANVLKDKNIIPGAGAFYIALSRYLRSANMNKLGAKGKTKTGIEAFAEALLVIPKTLVKNSGFDPLDVLAMVED 475 (546)
T ss_dssp HHHHHHHHHHTTSCCEEETTTHHHHHHHHHHHHHHTTTTTTTSHHHHHHHHHHHHHHHHHHHHHTTTCCTTTTCCHHHHH
T ss_pred HHHHHHHHHHhcCCcEEeCCCHHHHHHHHHHHhhhhhhhcCchHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHH
Confidence 999999999999999999999999999999998 57888999999999999999999999999999999999999999
Q ss_pred HHhC-----CCCceeeEeCCCCccccccccccccchHHHHHHHHHHHHHHHHHHhhhHhhcCCcc
Q 008712 469 KHAN-----GENAWIGIDGNTGAISDMKERKIWDAYNVKAQTFKTAIEAACMLLRIDDIVSGIKK 528 (557)
Q Consensus 469 ~~~~-----~~~~~~Gid~~~~~i~d~~~~gI~dp~~vk~~~l~~A~e~a~~lL~iD~ii~~~~~ 528 (557)
.|.. ++ .++|||+.+|++.||++.|||||+.||+++|+.|+|+|++|||||++|...+.
T Consensus 476 ~h~~~~~~~~~-~~~G~d~~~g~~~d~~~~gI~dp~~vk~~al~~A~~~a~~iL~iD~ii~~~~~ 539 (546)
T 3p9d_F 476 ELDDAQDSDET-RYVGVDLNIGDSCDPTIEGIWDSYRVLRNAITGATGIASNLLLCDELLRAGRS 539 (546)
T ss_dssp HHHHHTTSTTS-SCCCCBTTTTBCCCSGGGTCEEEHHHHHHHHHHHHHHHHHHHTEEEEEEECCS
T ss_pred HhhhhhcccCC-ceeeEeCCCCeecchHhccCEecHHHHHHHHHHHHHHHHHHHHHHHHHcCCcc
Confidence 8862 32 57999999999999999999999999999999999999999999999987543
No 22
>3aq1_B Thermosome subunit; group II chaperonin, protein folding, chaperone; 2.75A {Methanococcoides burtonii}
Probab=100.00 E-value=4.7e-103 Score=841.31 Aligned_cols=480 Identities=35% Similarity=0.616 Sum_probs=387.2
Q ss_pred eeecCCCCEEEeccHHHHhhcccccChHHHHHHHHHHhhhccccCChhHHHHHHHHHHHHHHHHHhcCCChhhHHHHHHH
Q 008712 47 MLLDASGGIVVTNDGNAILRELDVAHPAAKSMIELSRTQDEEVGDGTTSVIVLAGEMLHVAEEFIDKNYHPTVICRAYNK 126 (557)
Q Consensus 47 ~i~~~~g~~~iTnDG~tIlk~l~~~hP~a~ll~~~~~~~~~~~GDGttt~viLa~~Ll~~~~~li~~gi~p~~I~~g~~~ 126 (557)
||+++.|+++|||||+||||+|+++||+|+|++++|++|++++||||||+++||++||+++.+++++|+||..|++||++
T Consensus 1 mlv~~~G~~~iTnDG~tIlk~i~v~hP~Akll~e~a~~qd~e~GDGTTtvvvLa~~LL~~a~~ll~~GihP~~I~~G~~~ 80 (500)
T 3aq1_B 1 MLVDSMGDIVITNDGATILKEMDIQHPAAKMIVEVSKTQDAEVGDGTTTAAVLSGELLSKAEELIMKGVHSTIISEGYRH 80 (500)
T ss_dssp ------------------------------------------CCHHHHHHHHHHHHHHHHHHHHHTTTCCHHHHHHHHHH
T ss_pred CccCCCCCeEEECcHHHHHHhCcCCCHHHHHHHHHHHhhhhhhCCChHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
Confidence 68889999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhcccccCCCCHHHHHHHHHHHhhcccccchhHHHHHHHHHHHhhcccccCCCccccCcccceEEEEecCC
Q 008712 127 ALEDAVAVLDKIAMPIDTNDRATMLGLVKSCIGTKFTSQFGDLIADLAIDATTTVGVDLGQGLREVDIKKYIKVEKVPGG 206 (557)
Q Consensus 127 a~~~~~~~L~~~s~~v~~~~~~~l~~ia~t~l~sK~~~~~~~~ls~li~~a~~~v~~~~~~g~~~~d~~~~I~I~~~~G~ 206 (557)
|++.++++|++++++++..+++.|.++|+|+|+||+.++|+++|++++++|+.+++.+. +|..++|+.++|+|++++|+
T Consensus 81 A~~~a~~~L~~~s~~v~~~d~~~l~~va~tsl~sKi~~~~~~~i~~li~dAv~~v~~~~-~g~~~~di~~~I~V~k~~G~ 159 (500)
T 3aq1_B 81 AAEKCREILETITIAISPDDEAALIKIAGTAITGKGAEAYKEKLSALTVKAVRSIVEEE-EDGLKVNVLENIKIEKRAGG 159 (500)
T ss_dssp HHHHHHHHHHHHCEECCTTCHHHHHHHHHTTCCSSSTTSSHHHHHHHHHHHHTTSEECC-SSSCEECHHHHEEEEEEESS
T ss_pred HHHHHHHHHHHhcCCCCCCcHHHHHHHHHHHhhcccccccHHHHHHHHHHHHHHhcccc-cCCccccccccEEEEEecCC
Confidence 99999999999999998767899999999999999999999999999999999998531 24445774457999999999
Q ss_pred CCCCcEEEEeEEEeccccCCCCCccccCCceEEEEecCCccccccccceEEecCHHHHHHHHHHHHHHHHHHHHHHHhcC
Q 008712 207 QLEDSRVLKGVMFNKDVVAPGKMRRKIVNPRIILLDSPLEYKKGENQTNAELVKEEDWEVLLKMEEEYIENLCMQILKFK 286 (557)
Q Consensus 207 ~~~ds~li~Giv~~~~~~~~~~~~~~~~n~kIll~~~~Le~~k~~~~~~~~i~~~~~l~~~~~~E~~~i~~~l~~i~~~~ 286 (557)
++++|++++|++|++++.++ .|+++++||||++++++|++++++.++++.++++++++.++++|+++++++++++.+.|
T Consensus 160 ~~~ds~lv~G~v~dk~~~~~-~m~~~i~n~kIll~~~~Le~~k~e~~~~v~i~~~~~l~~~~~~E~~~l~~~le~I~~~g 238 (500)
T 3aq1_B 160 SIDDSELIDGLVIDKERSHP-NMPEKVENAKILLLSCPVEFRKTEVDSEIKITSPGQMQLFLDQEEKMMREMAEKVIASG 238 (500)
T ss_dssp CGGGCEEESEEEESCCCSST-TSCSEEEEEEEEEESSCBCC-------------------------CHHHHHHHHHHTTC
T ss_pred CccceEEEeeeEEeecCCCC-CCcccccCCEEEEEeCCccccccccceeEeeCCHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 99999999999999999998 89999999999999999999999999999999999999999999999999999999999
Q ss_pred CcEEEeCCCCCHHHHHHHHHcCCeEEecCChhHHHHHHHHhCCeeccCCCCCCCCCcCCccceEEEEEECCeEEEEEEec
Q 008712 287 PDLVITEKGLSDLACHYLSKAGVSAIRRLRKTDNNRIAKACGAVIVNRPDELQESDVGTGAGLFEVKKIGDEFFAFIVDC 366 (557)
Q Consensus 287 ~~lIi~~~~i~~~al~~L~~~~I~~i~~v~~~~l~~i~~~tG~~ii~~~~~l~~~~lG~~~~~v~~~~ig~~~~~~l~~~ 366 (557)
++|||++++|++.+++||.++||++++++++++|+|||++||++++++++++++++||+ |+.|++.++|+++|++|+||
T Consensus 239 ~~lvi~~~~I~~~al~~L~~~~I~av~~~~k~~le~ia~~tGa~iis~l~~~~~~~LG~-a~~v~~~~ig~~~~~~~~g~ 317 (500)
T 3aq1_B 239 ANVVFCQKGIDDMAQYYIEKAGIYAVRRVKKSDLKRLSKVTGATIIQDLDQITTEDVGT-AGLVEEKEVRGGKMTYVTGC 317 (500)
T ss_dssp CSEEEESSCBCHHHHHHHHHTTCEEECSCCHHHHHHHHHHHCCCCBSCTTCCCSTTCEE-EEEEEEEECSSSEEEEEEEE
T ss_pred cCEEEECCCcCHHHHHHHHHCCEEEEEeCCHHHHHHHHHHhCCeEecccccCCHhHCCC-ceEEEEEEecCeEEEEEECC
Confidence 99999999999999999999999999999999999999999999999999999999999 99999999999999999999
Q ss_pred CCCCeEEEEEccCCHHHHHHHHHHHHHHHHHHHHHHhCCCcccCCCchHHHHHHHHHhhhccCCCccchHHHHHHHHHHH
Q 008712 367 KDPKACTVLLRGASKDLLNEVERNLQDAMSVARNIIKNPKLVPGGGATELTVSATLKQKSSSIEGIEKWPYEAAAIAFEA 446 (557)
Q Consensus 367 ~~~~~~TIll~G~t~~~l~e~~~~l~dal~~~~~~~~~g~vvpGGG~~E~~l~~~L~~~~~~~~~~~~~~~~~~a~aL~~ 446 (557)
+++++|||+|||+|+.+++|.||+++|||+++|+++++|++|||||++|++|+.+|++++.+.++++|+++++|++||+.
T Consensus 318 ~~~~~~TI~lrG~t~~~l~E~er~l~Dal~~~r~~~~~~~iVpGGGa~e~~~~~~L~~~~~~~~g~~q~~i~~~a~ALe~ 397 (500)
T 3aq1_B 318 QNSKAVTVLLHGGTEHVVDSLDHALNDALHVVGVVIEDGKVVVGGGSSEVELSLRLSEYASTLKGREQLAVSKFAEALEV 397 (500)
T ss_dssp TTCCCEEEEEEESSHHHHHHHHHHHHHHHHHHHHHHHHSEEEETTTHHHHHHHHHHHHHHHTCCSHHHHHHHHHHHHTTH
T ss_pred CCCceEEEEecCCcHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCcHHHHHHHHHHHHHhhhcCchHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999988899999999999999999
Q ss_pred HHHHHHHhcCCCHHHHHHHHHHHHhCCCCceeeEeCCCCccccccccccccchHHHHHHHHHHHHHHHHHHhhhHhhcCC
Q 008712 447 IPRTLAQNCGINVIRTMTALQGKHANGENAWIGIDGNTGAISDMKERKIWDAYNVKAQTFKTAIEAACMLLRIDDIVSGI 526 (557)
Q Consensus 447 ip~~L~~NaG~d~~~~~~~l~~~~~~~~~~~~Gid~~~~~i~d~~~~gI~dp~~vk~~~l~~A~e~a~~lL~iD~ii~~~ 526 (557)
||++|++|||+|+.+++.+|+..|..+. .++|||+.+|++.||.+.|||||+.||+++|+.|+|+|++|||||++|...
T Consensus 398 ip~~La~NaG~d~~~~v~~l~~~h~~~~-~~~G~d~~~g~~~d~~~~gI~dp~~vk~~al~~A~e~a~~iL~iD~iI~~~ 476 (500)
T 3aq1_B 398 IPVALAENAGLDPIDIMVELRSQHEKGN-KNAGLNVYTGEVVDMWENDVIEPLRIKTQAINAAMEATVMILRIDDVVASK 476 (500)
T ss_dssp HHHHHHHHTTCCHHHHHHHHHHHHHTTC-TTEEECTTTCCEEETTTTTCEEEHHHHHHHHHHHHHHHHHHHCC-------
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHhcCCC-CCeeEeCCCCCccchHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 9999999999999999999999997664 679999999999999999999999999999999999999999999999987
Q ss_pred ccCC
Q 008712 527 KKKQ 530 (557)
Q Consensus 527 ~~~~ 530 (557)
|++.
T Consensus 477 ~~~~ 480 (500)
T 3aq1_B 477 GSAN 480 (500)
T ss_dssp ----
T ss_pred ccCC
Confidence 7544
No 23
>1we3_A CPN60(groel); chaperonin, chaperone, groel, HSP60, HSP10, folding, ADP, ATP; HET: ADP; 2.80A {Thermus thermophilus} SCOP: a.129.1.1 c.8.5.1 d.56.1.1 PDB: 1wf4_a*
Probab=100.00 E-value=1.3e-94 Score=779.50 Aligned_cols=463 Identities=22% Similarity=0.337 Sum_probs=428.0
Q ss_pred cccccHHHHHHHHHHHHHHHHHhhhcCCCCCCceeeecCCCCEEEeccHHHHhhcccccCh----HHHHHHHHHHhhhcc
Q 008712 13 KRESGTKVHHANIQASKAVADIIRTTLGPRSMLKMLLDASGGIVVTNDGNAILRELDVAHP----AAKSMIELSRTQDEE 88 (557)
Q Consensus 13 ~~~~g~~~~~~~~~~~~~l~~~v~sslGP~G~~k~i~~~~g~~~iTnDG~tIlk~l~~~hP----~a~ll~~~~~~~~~~ 88 (557)
+..+|.++|.+|+.||..|+++|+|||||+||+|||+++.|+++|||||+||+|+|+++|| +|+|++++|++|+++
T Consensus 4 ~~~~g~~ar~~~~~~~~~la~~vkttLGPkG~~kmi~~~~g~~~ITnDG~tIlk~i~~~hp~en~~Akll~e~a~~qd~e 83 (543)
T 1we3_A 4 ILVFDEAARRALERGVNAVANAVKVTLGPRGRNVVLEKKFGSPTITKDGVTVAKEVELEDHLENIGAQLLKEVASKTNDV 83 (543)
T ss_dssp EEEEHHHHHHHHHHHHHHHHHHHGGGCSTTCCEEEECCSSSSCEEECCHHHHHHHCCCSSHHHHHHHHHHHHHHHHHHHH
T ss_pred cccccHHHHHHHHHHHHHHHHHHHhccCCCCCeEEEECCCCCeEEEcCHHHHHHHcccCChHHhHHHHHHHHHHHhhhee
Confidence 3568999999999999999999999999999999999999999999999999999999999 999999999999999
Q ss_pred ccCChhHHHHHHHHHHHHHHHHHhcCCChhhHHHHHHHHHHHHHHHHhhcccccCCCCHHHHHHHHHHHhhcccccchhH
Q 008712 89 VGDGTTSVIVLAGEMLHVAEEFIDKNYHPTVICRAYNKALEDAVAVLDKIAMPIDTNDRATMLGLVKSCIGTKFTSQFGD 168 (557)
Q Consensus 89 ~GDGttt~viLa~~Ll~~~~~li~~gi~p~~I~~g~~~a~~~~~~~L~~~s~~v~~~~~~~l~~ia~t~l~sK~~~~~~~ 168 (557)
+||||||++|||++||+++.+++++|+||..|++||++|++.++++|++++++++ +++.|.++++++++ ++
T Consensus 84 ~GDGTTtvvVLA~~LL~ea~~li~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~--~~~~l~~vA~iS~~-------~~ 154 (543)
T 1we3_A 84 AGDGTTTATVLAQAIVREGLKNVAAGANPLALKRGIEKAVEAAVEKIKALAIPVE--DRKAIEEVATISAN-------DP 154 (543)
T ss_dssp HSSCHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHTCBCCC--SHHHHHHHHHHHHT-------CH
T ss_pred cCCCcchHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhcccCC--CHHHHHHhhhhhcC-------CH
Confidence 9999999999999999999999999999999999999999999999999999986 58899999998752 68
Q ss_pred HHHHHHHHHHhhcccccCCCccccCcccceEEEEecCCCCCCc-EEEEeEEEeccccCC------CCCccccCCceEEEE
Q 008712 169 LIADLAIDATTTVGVDLGQGLREVDIKKYIKVEKVPGGQLEDS-RVLKGVMFNKDVVAP------GKMRRKIVNPRIILL 241 (557)
Q Consensus 169 ~ls~li~~a~~~v~~~~~~g~~~~d~~~~I~I~~~~G~~~~ds-~li~Giv~~~~~~~~------~~~~~~~~n~kIll~ 241 (557)
++++++++|+.+++. +|. |+|+ .|+++++| ++++|++|++++.+| .+|+++++||+|+++
T Consensus 155 ~i~~li~dAv~~V~~---~g~--------I~Ve--~G~~~~ds~~lv~G~~~dkg~~~p~~vt~~~~m~~~~en~~Ill~ 221 (543)
T 1we3_A 155 EVGKLIADAMEKVGK---EGI--------ITVE--ESKSLETELKFVEGYQFDKGYISPYFVTNPETMEAVLEDAFILIV 221 (543)
T ss_dssp HHHHHHHHHHHTTCT---TSE--------EEEE--ECSSSSCEEEEECSEEESCCBSSGGGCSBTTTTBCCEEEEEEEEE
T ss_pred HHHHHHHHHHHHhCc---CCc--------EEEe--cCCccccceEEEcCEEEecCccccccccCcccCceeecCceEEEE
Confidence 899999999999975 342 7776 69999988 999999999999885 357888999999999
Q ss_pred ecCCccccccccceEEecCHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEeCCCCCHHHHHHHHHc------CCeEEe--
Q 008712 242 DSPLEYKKGENQTNAELVKEEDWEVLLKMEEEYIENLCMQILKFKPDLVITEKGLSDLACHYLSKA------GVSAIR-- 313 (557)
Q Consensus 242 ~~~Le~~k~~~~~~~~i~~~~~l~~~~~~E~~~i~~~l~~i~~~~~~lIi~~~~i~~~al~~L~~~------~I~~i~-- 313 (557)
|+++ ++.+++. ++++++.+.|++|||++++|+++++++|..+ +|++++
T Consensus 222 d~~I-------------s~~~~l~-----------~~le~i~~~g~~lvii~~~I~~~Al~~L~~n~irg~~~v~aVk~~ 277 (543)
T 1we3_A 222 EKKV-------------SNVRELL-----------PILEQVAQTGKPLLIIAEDVEGEALATLVVNKLRGTLSVAAVKAP 277 (543)
T ss_dssp SSCB-------------CCHHHHH-----------HHHHHHHTTTCCEEEEESCBCHHHHHHHHHHHHHTSCCEEEEECS
T ss_pred CCCc-------------CCHHHHH-----------HHHHHHHhcCCCEEEEcCCccHHHHHHHHHhccccceeEEEEecc
Confidence 9974 4555543 5788899999999999999999999999986 456665
Q ss_pred ---cCChhHHHHHHHHhCCeeccC-----CCCCCCCCcCCccceEEEEEECCeEEEEEEecCC-----------------
Q 008712 314 ---RLRKTDNNRIAKACGAVIVNR-----PDELQESDVGTGAGLFEVKKIGDEFFAFIVDCKD----------------- 368 (557)
Q Consensus 314 ---~v~~~~l~~i~~~tG~~ii~~-----~~~l~~~~lG~~~~~v~~~~ig~~~~~~l~~~~~----------------- 368 (557)
++++++|+||+++||++++++ ++++++++||+ |+.|++ +++++++|+||.+
T Consensus 278 ~~~~~~~~~le~ia~~tGa~ii~~~~g~~l~~~~~~~LG~-a~~v~~---~~~~~~~i~g~~~~~~i~~r~~~i~~~~~~ 353 (543)
T 1we3_A 278 GFGDRRKEMLKDIAAVTGGTVISEELGFKLENATLSMLGR-AERVRI---TKDETTIVGGKGKKEDIEARINGIKKELET 353 (543)
T ss_dssp SSHHHHHHHHHHHHHHHCCCCBCTTTTCCGGGCCGGGCEE-EEEEEE---CSSCEEEEEECCCHHHHHHHHHHHHHHHTT
T ss_pred chhhhhHHHHHHHHHHhCCceeeccccCCcccCCHHHCCC-ceEEEE---EcCEEEEEcCCCCHHHHHHHHHHHHHHhhc
Confidence 889999999999999999996 89999999999 999976 4689999999975
Q ss_pred ------------------CCeEEEEEccCCHHHHHHHHHHHHHHHHHHHHHHhCCCcccCCCchHHHHHHHHHhhhccCC
Q 008712 369 ------------------PKACTVLLRGASKDLLNEVERNLQDAMSVARNIIKNPKLVPGGGATELTVSATLKQKSSSIE 430 (557)
Q Consensus 369 ------------------~~~~TIll~G~t~~~l~e~~~~l~dal~~~~~~~~~g~vvpGGG~~E~~l~~~L~~~~~~~~ 430 (557)
+++|||+|||+|+.+++|.||+++|||+++|+++++| +|||||++|++|+.+|++++.+.+
T Consensus 354 ~~s~~~~e~l~erlakl~~~~~tI~lrG~te~~l~E~~r~i~DAl~~~r~av~~g-iVpGGGa~e~~~s~~L~~~~~~~~ 432 (543)
T 1we3_A 354 TDSEYAREKLQERLAKLAGGVAVIRVGAATETELKEKKHRFEDALNATRAAVEEG-IVPGGGVTLLRAISAVEELIKKLE 432 (543)
T ss_dssp CCSHHHHHHHHHHHHHHTTCEEEEEECCSSHHHHHHHHHHHHHHHHHHHHHHHHC-EEETTTHHHHHHHHHHHHHHTTCC
T ss_pred cCchhHHHHHHHHHHhccCCeEEEEeCCCCHHHHHHHHHHHHHHHHHHHHHhccC-cCCCccHHHHHHHHHHHHHhhccC
Confidence 3789999999999999999999999999999999999 999999999999999999988778
Q ss_pred CccchHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHhCCCCceeeEeCCCCccccccccccccchHHHHHHHHHHH
Q 008712 431 GIEKWPYEAAAIAFEAIPRTLAQNCGINVIRTMTALQGKHANGENAWIGIDGNTGAISDMKERKIWDAYNVKAQTFKTAI 510 (557)
Q Consensus 431 ~~~~~~~~~~a~aL~~ip~~L~~NaG~d~~~~~~~l~~~~~~~~~~~~Gid~~~~~i~d~~~~gI~dp~~vk~~~l~~A~ 510 (557)
+++|+++++|++||+.||++|++|||+|+.+++.+|+..|. +.++|||..+|++.||.+.|||||+.||+++|+.|+
T Consensus 433 g~~q~~i~~~a~ALe~ip~~La~NaG~d~~~vv~~l~~~h~---~~~~G~d~~~g~~~dm~~~gI~dp~~vk~~al~~A~ 509 (543)
T 1we3_A 433 GDEATGAKIVRRALEEPARQIAENAGYEGSVIVQQILAETK---NPRYGFNAATGEFVDMVEAGIVDPAKVTRSALQNAA 509 (543)
T ss_dssp HHHHHHHHHHHHHTTHHHHHHHHHHTSCHHHHHHHHHHCCS---CTTEEEETTTTEEEETTTTTCEEEHHHHHHHHHHHH
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHhcC---CCCEEEeCCCCeecccccCCcCccHHHHHHHHHHHH
Confidence 89999999999999999999999999999999999998773 267999999999999999999999999999999999
Q ss_pred HHHHHHHhhhHhhcCCccC
Q 008712 511 EAACMLLRIDDIVSGIKKK 529 (557)
Q Consensus 511 e~a~~lL~iD~ii~~~~~~ 529 (557)
|+|++||++|++|...|++
T Consensus 510 e~a~~iL~id~iI~~~~~~ 528 (543)
T 1we3_A 510 SIGALILTTEAVVAEKPEK 528 (543)
T ss_dssp HHHHHHHTEEEEEEECSCC
T ss_pred HHHHHHHHHHHHhhcCCcc
Confidence 9999999999999987653
No 24
>1kp8_A Groel protein; chaperonin, assisted protein folding, chaperone; HET: ATP; 2.00A {Escherichia coli} SCOP: a.129.1.1 c.8.5.1 d.56.1.1 PDB: 1gr5_A 2c7e_A* 1grl_A 1oel_A 1xck_A 1gru_A 1mnf_A 1aon_A 2c7c_A 2c7d_A 2cgt_A 2nwc_A 3e76_A* 2eu1_A 1j4z_A 1kpo_O 1sx3_A* 3c9v_A 1ss8_A 3cau_A ...
Probab=100.00 E-value=1e-94 Score=779.08 Aligned_cols=462 Identities=21% Similarity=0.326 Sum_probs=426.2
Q ss_pred cccccHHHHHHHHHHHHHHHHHhhhcCCCCCCceeeecCCCCEEEeccHHHHhhcccccCh----HHHHHHHHHHhhhcc
Q 008712 13 KRESGTKVHHANIQASKAVADIIRTTLGPRSMLKMLLDASGGIVVTNDGNAILRELDVAHP----AAKSMIELSRTQDEE 88 (557)
Q Consensus 13 ~~~~g~~~~~~~~~~~~~l~~~v~sslGP~G~~k~i~~~~g~~~iTnDG~tIlk~l~~~hP----~a~ll~~~~~~~~~~ 88 (557)
+..+|.++|.+|+.||..|+++|++||||+||+|||+++.|+|+|||||+||+|+|+++|| +|+|++++|++|+++
T Consensus 4 ~~~~g~~ar~~~i~~~~~la~~vkttLGPkG~~kmi~~~~G~~~ITnDG~tIlk~i~~~hp~en~~Akll~e~a~~qd~e 83 (547)
T 1kp8_A 4 DVKFGNDAGVKMLRGVNVLADAVKVTLGPKGRNVVLDKSFGAPTITKDGVSVAREIELEDKFENMGAQMVKEVASKANDA 83 (547)
T ss_dssp EEEEHHHHHHHHHHHHHHHHHHHHTTCSTTCCEEEECCSSSSCEEECCHHHHHHHCCCSSHHHHHHHHHHHHHHHHHHHH
T ss_pred cccccHHHHHHHHHHHHHHHHHHHhccCCCCCeEEEECCCCCeEEEcCHHHHHHHccccChhhhHHHHHHHHHHHhhccc
Confidence 3568999999999999999999999999999999999999999999999999999999999 999999999999999
Q ss_pred ccCChhHHHHHHHHHHHHHHHHHhcCCChhhHHHHHHHHHHHHHHHHhhcccccCCCCHHHHHHHHHHHhhcccccchhH
Q 008712 89 VGDGTTSVIVLAGEMLHVAEEFIDKNYHPTVICRAYNKALEDAVAVLDKIAMPIDTNDRATMLGLVKSCIGTKFTSQFGD 168 (557)
Q Consensus 89 ~GDGttt~viLa~~Ll~~~~~li~~gi~p~~I~~g~~~a~~~~~~~L~~~s~~v~~~~~~~l~~ia~t~l~sK~~~~~~~ 168 (557)
+||||||++||+++||+++.+++++|+||..|++||++|++.++++|++++++++ +++.|.+++++++ ++++
T Consensus 84 ~GDGTTtvvVLA~~Ll~ea~~lv~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~--~~e~l~~vA~iS~------~~~~ 155 (547)
T 1kp8_A 84 AGDGTTTATVLAQAIITEGLKAVAAGMNPMDLKRGIDKAVTVAVEELKALSVPCS--DSKAIAQVGTISA------NSDE 155 (547)
T ss_dssp HSSCHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHHCBCCC--SHHHHHHHHHHHT------TSCH
T ss_pred cCCCcchhHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhCcCCC--CHHHHHHHHHHhc------cchh
Confidence 9999999999999999999999999999999999999999999999999999986 5889999999885 3578
Q ss_pred HHHHHHHHHHhhcccccCCCccccCcccceEEEEecCCCCCCc-EEEEeEEEeccccCCC------CCccccCCceEEEE
Q 008712 169 LIADLAIDATTTVGVDLGQGLREVDIKKYIKVEKVPGGQLEDS-RVLKGVMFNKDVVAPG------KMRRKIVNPRIILL 241 (557)
Q Consensus 169 ~ls~li~~a~~~v~~~~~~g~~~~d~~~~I~I~~~~G~~~~ds-~li~Giv~~~~~~~~~------~~~~~~~n~kIll~ 241 (557)
+|++++++|+.+++. +|. |+|+ .|+++++| ++++|++|++++.+|. +|+++++||||+++
T Consensus 156 ~i~~liadAv~~V~~---dg~--------I~Ve--~G~~~~ds~~lveG~~fdkg~~~p~~vt~~~~m~~~lenp~Ill~ 222 (547)
T 1kp8_A 156 TVGKLIAEAMDKVGK---EGV--------ITVE--DGTGLQDELDVVEGMQFDRGYLSPYFINKPETGAVELESPFILLA 222 (547)
T ss_dssp HHHHHHHHHHHHHCT---TSE--------EEEE--CCSSSSCEEEEESCEEESCCBSSTTCCSBTTTTBEEEESCEEECE
T ss_pred HHHHHHHHHHHHhCc---CCc--------EEEE--eCCccccccEEEecEEEecCccccccccCcccCceEecCceEEEE
Confidence 999999999999985 342 7775 79999999 9999999999998862 47888999999999
Q ss_pred ecCCccccccccceEEecCHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEeCCCCCHHHHHHHHHcCC------eEEe--
Q 008712 242 DSPLEYKKGENQTNAELVKEEDWEVLLKMEEEYIENLCMQILKFKPDLVITEKGLSDLACHYLSKAGV------SAIR-- 313 (557)
Q Consensus 242 ~~~Le~~k~~~~~~~~i~~~~~l~~~~~~E~~~i~~~l~~i~~~~~~lIi~~~~i~~~al~~L~~~~I------~~i~-- 313 (557)
|+++ ++.+++. ++++++.+.|++|||++++|+++++++|..++| ++++
T Consensus 223 d~~I-------------s~~~~l~-----------~~le~i~~~g~~lvIi~~~I~~~Al~~L~~n~irg~~~v~aVk~~ 278 (547)
T 1kp8_A 223 DKKI-------------SNIREML-----------PVLEAVAKAGKPLLIIAEDVEGEALATLVVNTMRGIVKVAAVKAP 278 (547)
T ss_dssp ESEE-------------CCGGGTH-----------HHHHHHHGGGCCEEEEESEECHHHHHHHHHHGGGTSSCEEEEECS
T ss_pred cCcC-------------CCHHHHH-----------HHHHHHHhcCCCEEEECCCcCHHHHHHHHhcccccceeEEEEecc
Confidence 9974 4555543 477889999999999999999999999999754 5555
Q ss_pred ---cCChhHHHHHHHHhCCeeccC-----CCCCCCCCcCCccceEEEEEECCeEEEEEEecCCC----------------
Q 008712 314 ---RLRKTDNNRIAKACGAVIVNR-----PDELQESDVGTGAGLFEVKKIGDEFFAFIVDCKDP---------------- 369 (557)
Q Consensus 314 ---~v~~~~l~~i~~~tG~~ii~~-----~~~l~~~~lG~~~~~v~~~~ig~~~~~~l~~~~~~---------------- 369 (557)
++++++|+||+++||++++++ ++++++++||+ |+.|++ +++++++|+||.++
T Consensus 279 ~~~~~rk~~le~ia~~tG~~ii~~~~g~~l~~~~~~~LG~-a~~v~~---~~~~~~~i~g~~~~~~i~~r~~~i~~~~~~ 354 (547)
T 1kp8_A 279 GFGDRRKAMLQDIATLTGGTVISEEIGMELEKATLEDLGQ-AKRVVI---NKDTTTIIDGVGEEAAIQGRVAQIRQQIEE 354 (547)
T ss_dssp SCHHHHHHHHHHHHHHHTCCCEEGGGTCCSTTCCTTTSEE-EEEEEE---CSSCEEEEEECCCHHHHHHHHHHHHHHHHS
T ss_pred ccccccHHHHHHHHHHhCCeEecccccCCcccCCHHHCCc-eeEEEE---ccceEEEEcCCCCHHHHHHHHHHHHHHhhc
Confidence 999999999999999999995 99999999999 999976 46999999999764
Q ss_pred -------------------CeEEEEEccCCHHHHHHHHHHHHHHHHHHHHHHhCCCcccCCCchHHHHHHHHHhhhccCC
Q 008712 370 -------------------KACTVLLRGASKDLLNEVERNLQDAMSVARNIIKNPKLVPGGGATELTVSATLKQKSSSIE 430 (557)
Q Consensus 370 -------------------~~~TIll~G~t~~~l~e~~~~l~dal~~~~~~~~~g~vvpGGG~~E~~l~~~L~~~~~~~~ 430 (557)
++|||+|||+|+.+++|+||+++|||+++|+++++| +|||||++|++|+.+|++++. .+
T Consensus 355 ~~s~~~~ekl~erlakl~~~~~tI~vrG~te~~l~E~kr~i~DAl~~~r~av~~g-iVpGGGa~e~~~s~~L~~~~~-~~ 432 (547)
T 1kp8_A 355 ATSDYDREKLQERVAKLAGGVAVIKVGAATEVEMKEKKARVEDALHATRAAVEEG-VVAGGGVALIRVASKLADLRG-QN 432 (547)
T ss_dssp CCSHHHHHHHHHHHHHHHHCEEEEECCCSSHHHHHHHHHHHHHHHHHHHHHHHHC-EEETTTHHHHHHHHHTTTCCC-SS
T ss_pred ccchhhHHHHHHHHHHhcCCeEEEEEcCCcHhHHHHHHHHHHHHHHHHHHhccCC-EEeCCcHHHHHHHHHHHHHhc-cC
Confidence 789999999999999999999999999999999999 999999999999999998876 67
Q ss_pred CccchHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHhCCCCceeeEeCCCCccccccccccccchHHHHHHHHHHH
Q 008712 431 GIEKWPYEAAAIAFEAIPRTLAQNCGINVIRTMTALQGKHANGENAWIGIDGNTGAISDMKERKIWDAYNVKAQTFKTAI 510 (557)
Q Consensus 431 ~~~~~~~~~~a~aL~~ip~~L~~NaG~d~~~~~~~l~~~~~~~~~~~~Gid~~~~~i~d~~~~gI~dp~~vk~~~l~~A~ 510 (557)
+++|+++++|++||+.||++|++|||+|+.+++.+|+.. +.++|||..+|++.||.+.|||||+.||+++|+.|+
T Consensus 433 g~~q~~i~~~a~ALe~ip~~la~NaG~d~~~vv~~l~~~-----~~~~G~d~~~g~~~dm~~~gI~Dp~~vk~~al~~A~ 507 (547)
T 1kp8_A 433 ADQNVGIKVALRAMEAPLRQIVLNCGEEPSVVANTVKGG-----DGNYGYNAATEEYGNMIDMGILDPTKVTRSALQYAA 507 (547)
T ss_dssp HHHHHHHHHHHHHTTHHHHHHHHHHTSCHHHHHHHHHHS-----CTTEEEETTTTEEEETTTTTCEEEHHHHHHHHHHHH
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHhc-----CCCEeEeCCCCccccchhcCceechHhHHHHHHHHH
Confidence 899999999999999999999999999999999999854 267999999999999999999999999999999999
Q ss_pred HHHHHHHhhhHhhcCCccCC
Q 008712 511 EAACMLLRIDDIVSGIKKKQ 530 (557)
Q Consensus 511 e~a~~lL~iD~ii~~~~~~~ 530 (557)
|+|++||++|++|...|++.
T Consensus 508 ~~A~~iL~id~iI~~~~~~~ 527 (547)
T 1kp8_A 508 SVAGLMITTECMVTDLPKND 527 (547)
T ss_dssp HHHHHHHTEEEEEEECCC--
T ss_pred HHHHHHHhHhheeecCCccC
Confidence 99999999999999887655
No 25
>1iok_A Chaperonin 60; chaperone; 3.20A {Paracoccus denitrificans} SCOP: a.129.1.1 c.8.5.1 d.56.1.1
Probab=100.00 E-value=2e-95 Score=785.30 Aligned_cols=464 Identities=19% Similarity=0.297 Sum_probs=396.8
Q ss_pred cccccHHHHHHHHHHHHHHHHHhhhcCCCCCCceeeecCCCCEEEeccHHHHhhcccccCh----HHHHHHHHHHhhhcc
Q 008712 13 KRESGTKVHHANIQASKAVADIIRTTLGPRSMLKMLLDASGGIVVTNDGNAILRELDVAHP----AAKSMIELSRTQDEE 88 (557)
Q Consensus 13 ~~~~g~~~~~~~~~~~~~l~~~v~sslGP~G~~k~i~~~~g~~~iTnDG~tIlk~l~~~hP----~a~ll~~~~~~~~~~ 88 (557)
+..+|.++|.+|+.||..|+++|+|||||+||+|||+++.|+++|||||+||||+|+++|| +|+|++++|++|+++
T Consensus 5 ~~~~g~~ar~~~i~~~~~la~~vkttLGPkG~~kmi~~~~g~~~iTnDG~tIlk~i~~~hp~en~~Akll~e~a~~qd~e 84 (545)
T 1iok_A 5 EVKFNSDARDRMLKGVNILADAVKVTLGPKGRNVVIDKSFGAPRITKDGVSVAKEIELSDKFENMGAQMVREVASRTNDE 84 (545)
T ss_dssp EEEEHHHHHHHHHHHHHHHHHHHGGGCSTTCCEEEECCSSSSCEEECCHHHHHHHCCCSSHHHHHHHHHHHHHHHHGGGG
T ss_pred hhhccHHHHHHHHHHHHHHHHHHHhcCCCCCCeEEEECCCCCeEEeCCHHHHHHHhccCChhhHHHHHHHHHHHHhhccc
Confidence 3578999999999999999999999999999999999999999999999999999999999 999999999999999
Q ss_pred ccCChhHHHHHHHHHHHHHHHHHhcCCChhhHHHHHHHHHHHHHHHHhhcccccCCCCHHHHHHHHHHHhhcccccchhH
Q 008712 89 VGDGTTSVIVLAGEMLHVAEEFIDKNYHPTVICRAYNKALEDAVAVLDKIAMPIDTNDRATMLGLVKSCIGTKFTSQFGD 168 (557)
Q Consensus 89 ~GDGttt~viLa~~Ll~~~~~li~~gi~p~~I~~g~~~a~~~~~~~L~~~s~~v~~~~~~~l~~ia~t~l~sK~~~~~~~ 168 (557)
+||||||++||+++||+++.+++++|+||..|++||++|++.++++|++++++++ +++.|.+++++++ ++++
T Consensus 85 ~GDGTTtvvVLA~~Ll~ea~~li~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~--~~e~l~~va~iS~------~~~~ 156 (545)
T 1iok_A 85 AGDGTTTATVLAQAIVREGLKAVAAGMNPMDLKRGIDVATAKVVEAIKSAARPVN--DSSEVAQVGTISA------NGES 156 (545)
T ss_dssp CSTHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTCBCCC--STTTTTHHHHHTT------TTCH
T ss_pred cCCCcchHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhcccCC--CHHHHHHHHHhhc------CCch
Confidence 9999999999999999999999999999999999999999999999999999986 4678999998875 3578
Q ss_pred HHHHHHHHHHhhcccccCCCccccCcccceEEEEecCCCCCCc-EEEEeEEEeccccCC------CCCccccCCceEEEE
Q 008712 169 LIADLAIDATTTVGVDLGQGLREVDIKKYIKVEKVPGGQLEDS-RVLKGVMFNKDVVAP------GKMRRKIVNPRIILL 241 (557)
Q Consensus 169 ~ls~li~~a~~~v~~~~~~g~~~~d~~~~I~I~~~~G~~~~ds-~li~Giv~~~~~~~~------~~~~~~~~n~kIll~ 241 (557)
+|++++++|+.+++. ++. |+|+ .|+++++| ++++|++|++++.+| ..|+++++||||+++
T Consensus 157 ~i~~li~dAv~~V~~---~g~--------I~Ve--~G~~~~ds~~lveG~~~dkg~~~p~~vt~~~~m~~~~en~~Ill~ 223 (545)
T 1iok_A 157 FIGQQIAEAMQRVGN---EGV--------ITVE--ENKGMETEVEVVEGMQFDRGYLSPYFVTNADKMIAELEDAYILLH 223 (545)
T ss_dssp HHHHHHHHHHHHHCT---TSC--------CCCE--ECSSSCCEEEEECCEECSCCCSCGGGCCCSSSSCEEEEEEEEEEC
T ss_pred hHHHHHHHHHHHhcc---CCe--------EEEE--eCCccccceEEEecEEEecCccccccccCcccCceeecCCeEEEE
Confidence 999999999999985 342 6665 69999998 999999999999885 357888999999999
Q ss_pred ecCCccccccccceEEecCHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEeCCCCCHHHHHHHHHcCC------eEEe--
Q 008712 242 DSPLEYKKGENQTNAELVKEEDWEVLLKMEEEYIENLCMQILKFKPDLVITEKGLSDLACHYLSKAGV------SAIR-- 313 (557)
Q Consensus 242 ~~~Le~~k~~~~~~~~i~~~~~l~~~~~~E~~~i~~~l~~i~~~~~~lIi~~~~i~~~al~~L~~~~I------~~i~-- 313 (557)
|++|+ +.+++. ++++++.+.|++|||++++|+++++++|..++| ++++
T Consensus 224 d~~I~-------------~~~~l~-----------~~le~i~~~g~~lvIi~~~I~~~Al~~L~~n~irg~~~v~aVk~~ 279 (545)
T 1iok_A 224 EKKLS-------------SLQPMV-----------PLLESVIQSQKPLLIVAEDVEGEALATLVVNKLRGGLKIAAVKAP 279 (545)
T ss_dssp SSCBC-------------CCCC----------------------CCCCEEEESCBC-----------------CEEEECS
T ss_pred cCCcC-------------CHHHHH-----------HHHHHHHhcCCCEEEECCCcCHHHHHHHHHccccccceeEEEecc
Confidence 99864 333433 477889999999999999999999999999754 5555
Q ss_pred ---cCChhHHHHHHHHhCCeeccC-----CCCCCCCCcCCccceEEEEEECCeEEEEEEecCCC----------------
Q 008712 314 ---RLRKTDNNRIAKACGAVIVNR-----PDELQESDVGTGAGLFEVKKIGDEFFAFIVDCKDP---------------- 369 (557)
Q Consensus 314 ---~v~~~~l~~i~~~tG~~ii~~-----~~~l~~~~lG~~~~~v~~~~ig~~~~~~l~~~~~~---------------- 369 (557)
++++++|+||+++||++++++ ++++++++||+ |+.|++ +++++++|+||.++
T Consensus 280 ~~~~~~~~~le~ia~~tGa~ii~~~~~~~l~~~~~~~LG~-a~~v~~---~~~~~~~i~g~~~~~~i~~r~~~i~~~~~~ 355 (545)
T 1iok_A 280 GFGDRRKAMLQDIAILTGGQVISEDLGMKLENVTIDMLGR-AKKVSI---NKDNTTIVDGAGEKAEIEARVSQIRQQIEE 355 (545)
T ss_dssp CCTTHHHHHHHHHHHHHTC---------------CTTSEE-EEEEEE---CSSCEEEESCCCCHHHHHHHHHHHHHHHTT
T ss_pred hhhhccHHHHHHHHHhcCCeeecccccCCcccCCHHHcCc-CcEEEE---ecCEEEEEeCCCCHHHHHHHHHHHHHHHhc
Confidence 999999999999999999996 99999999999 999976 46899999999753
Q ss_pred -------------------CeEEEEEccCCHHHHHHHHHHHHHHHHHHHHHHhCCCcccCCCchHHHHHHHHHhhhccCC
Q 008712 370 -------------------KACTVLLRGASKDLLNEVERNLQDAMSVARNIIKNPKLVPGGGATELTVSATLKQKSSSIE 430 (557)
Q Consensus 370 -------------------~~~TIll~G~t~~~l~e~~~~l~dal~~~~~~~~~g~vvpGGG~~E~~l~~~L~~~~~~~~ 430 (557)
++|||+|||+|+.+++|.||+++|||+++|+++++| +|||||++|++|+.+|++++. .+
T Consensus 356 ~~s~~~~ekl~erlakl~~~~~tI~lrG~te~~l~E~kr~i~DAl~~~r~av~~g-iVpGGGa~e~~~s~~L~~~~~-~~ 433 (545)
T 1iok_A 356 TTSDYDREKLQERVAKLAGGVAVIRVGGMTEIEVKERKDRVDDALNATRAAVQEG-IVVGGGVALVQGAKVLEGLSG-AN 433 (545)
T ss_dssp CCCSSHHHHHHHHHHTTSSCEEEEEECCSSHHHHHHHHHHHHHHHHHHHHHHHHC-EEETTTHHHHHHGGGGGSCCC-SS
T ss_pred cCchhhHHHHHHHHHhccCCeEEEEeCCCCHHHHHHHHHHHHHHHHHHHHHhhcC-CCCCchHHHHHHHHHHHHHhc-cC
Confidence 789999999999999999999999999999999999 999999999999999998876 77
Q ss_pred CccchHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHhCCCCceeeEeCCCCccccccccccccchHHHHHHHHHHH
Q 008712 431 GIEKWPYEAAAIAFEAIPRTLAQNCGINVIRTMTALQGKHANGENAWIGIDGNTGAISDMKERKIWDAYNVKAQTFKTAI 510 (557)
Q Consensus 431 ~~~~~~~~~~a~aL~~ip~~L~~NaG~d~~~~~~~l~~~~~~~~~~~~Gid~~~~~i~d~~~~gI~dp~~vk~~~l~~A~ 510 (557)
+++|+++++|++||+.||++|++|||+|+.+++.+|+..| ++++|||..+|++.||++.|||||+.||+++|+.|+
T Consensus 434 g~~q~~i~~~a~ALe~ip~~La~NaG~d~~~vv~~l~~~~----~~~~G~d~~~g~~~dm~~~gI~dp~~vk~~al~~A~ 509 (545)
T 1iok_A 434 SDQDAGIAIIRRALEAPMRQIAENAGVDGAVVAGKVRESS----DKAFGFNAQTEEYGDMFKFGVIDPAKVVRTALEDAA 509 (545)
T ss_dssp HHHHHHHHHHHHHTTHHHHHHHHHHTSCHHHHHHHHHSCC----STTEEEETTTTEEEEHHHHTCEEEHHHHHHHHHHHH
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHhhc----CCCeeEeCCCCcccchHhcCcEEccHHHHHHHHHHH
Confidence 8999999999999999999999999999999999999765 267999999999999999999999999999999999
Q ss_pred HHHHHHHhhhHhhcCCccCCC
Q 008712 511 EAACMLLRIDDIVSGIKKKQA 531 (557)
Q Consensus 511 e~a~~lL~iD~ii~~~~~~~~ 531 (557)
|+|++||++|++|...|++.+
T Consensus 510 ~~A~~iL~id~iI~~~~~~~~ 530 (545)
T 1iok_A 510 SVAGLLITTEAMIAEKPEPKA 530 (545)
T ss_dssp HHHHHHHTEEEEEEECC----
T ss_pred HHHHHHHhHHHhhccCCccCC
Confidence 999999999999998876543
No 26
>3rtk_A 60 kDa chaperonin 2; heat shock protein, chaperone; 2.80A {Mycobacterium tuberculosis} PDB: 1sjp_A
Probab=100.00 E-value=2.8e-94 Score=773.33 Aligned_cols=461 Identities=22% Similarity=0.298 Sum_probs=351.8
Q ss_pred cccccHHHHHHHHHHHHHHHHHhhhcCCCCCCceeeecCCCCEEEeccHHHHhhcccccChH----HHHHHHHHHhhhcc
Q 008712 13 KRESGTKVHHANIQASKAVADIIRTTLGPRSMLKMLLDASGGIVVTNDGNAILRELDVAHPA----AKSMIELSRTQDEE 88 (557)
Q Consensus 13 ~~~~g~~~~~~~~~~~~~l~~~v~sslGP~G~~k~i~~~~g~~~iTnDG~tIlk~l~~~hP~----a~ll~~~~~~~~~~ 88 (557)
+..+|.++|.+|+.|+..|+++|++||||+||+|||+++.|+|+|||||+||||+|+++||+ |+|++++|++|+++
T Consensus 4 ~~~~~~~ar~~~~~~~~~la~~vkttLGPkG~~kml~~~~G~~~ITnDG~TIlk~i~v~hp~~n~gAkll~e~a~~qd~e 83 (546)
T 3rtk_A 4 TIAYDEEARRGLERGLNALADAVKVTLGPKGRNVVLEKKWGAPTITNDGVSIAKEIELEDPYEKIGAELVKEVAKKTDDV 83 (546)
T ss_dssp ---------------------------------------------------------CCCHHHHHHHHHHHHHHTSCC--
T ss_pred eeeccHHHHHHHHHHHHHHHHHHHhccCCCCCeEEEECCCCCeEEECcHHHHHHHccCCChhhhHHHHHHHHHHHhhhhh
Confidence 35789999999999999999999999999999999999999999999999999999999997 99999999999999
Q ss_pred ccCChhHHHHHHHHHHHHHHHHHhcCCChhhHHHHHHHHHHHHHHHHhhcccccCCCCHHHHHHHHHHHhhcccccchhH
Q 008712 89 VGDGTTSVIVLAGEMLHVAEEFIDKNYHPTVICRAYNKALEDAVAVLDKIAMPIDTNDRATMLGLVKSCIGTKFTSQFGD 168 (557)
Q Consensus 89 ~GDGttt~viLa~~Ll~~~~~li~~gi~p~~I~~g~~~a~~~~~~~L~~~s~~v~~~~~~~l~~ia~t~l~sK~~~~~~~ 168 (557)
+||||||++|||++||+++.+++++|+||..|++||++|++.++++|++++++++ +++.|.++|+++++ ++
T Consensus 84 ~GDGTTtvvVLAgeLL~ea~~li~~GihP~~I~~G~~~A~~~a~e~L~~~s~~v~--~~e~L~~vA~iS~~-------~~ 154 (546)
T 3rtk_A 84 AGDGTTTATVLAQALVREGLRNVAAGANPLGLKRGIEKAVEKVTETLLKGAKEVE--TKEQIAATAAISAG-------DQ 154 (546)
T ss_dssp -----CHHHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHHTCBCCC--SHHHHHHHHHHHHT-------CH
T ss_pred hCCCcchHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhcccCC--ChHHHHhHeEEeCC-------ch
Confidence 9999999999999999999999999999999999999999999999999999987 58899999998753 57
Q ss_pred HHHHHHHHHHhhcccccCCCccccCcccceEEEEecCCCCCCcEEEEeEEEeccccCC------CCCccccCCceEEEEe
Q 008712 169 LIADLAIDATTTVGVDLGQGLREVDIKKYIKVEKVPGGQLEDSRVLKGVMFNKDVVAP------GKMRRKIVNPRIILLD 242 (557)
Q Consensus 169 ~ls~li~~a~~~v~~~~~~g~~~~d~~~~I~I~~~~G~~~~ds~li~Giv~~~~~~~~------~~~~~~~~n~kIll~~ 242 (557)
++++++++|+.+++. +|. |+|++.. +...+|++++|++|++++.+| ++|+++++||||+++|
T Consensus 155 ~i~~liadAv~~V~~---dgv--------I~Ve~~~-~~~~ds~lveGm~fdkg~~sp~~vt~~e~m~~~len~kIll~d 222 (546)
T 3rtk_A 155 SIGDLIAEAMDKVGN---EGV--------ITVEESN-TFGLQLELTEGMRFDKGYISGYFVTDPERQEAVLEDPYILLVS 222 (546)
T ss_dssp HHHHHHHHHHHHSCT---TSE--------EEEECCS-SSSCEEEEECEEEESCCBSSGGGCSBTTTTBEEEESCEEEEBS
T ss_pred HHHHHHHHHHHHhcc---CCc--------eEEEecC-CcccceEEeeeEEEcCCccCcccccCcccCeeEecccEEEEEC
Confidence 899999999999985 343 8887644 344789999999999998876 3689999999999999
Q ss_pred cCCccccccccceEEecCHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEeCCCCCHHHHHHHHHcC------CeEE----
Q 008712 243 SPLEYKKGENQTNAELVKEEDWEVLLKMEEEYIENLCMQILKFKPDLVITEKGLSDLACHYLSKAG------VSAI---- 312 (557)
Q Consensus 243 ~~Le~~k~~~~~~~~i~~~~~l~~~~~~E~~~i~~~l~~i~~~~~~lIi~~~~i~~~al~~L~~~~------I~~i---- 312 (557)
++ +++++++. ++++++.+.|+||||++++|+++++++|..|+ ++++
T Consensus 223 ~k-------------Is~~~~l~-----------~~le~I~~~g~~lvIi~~~I~~~Al~~L~~n~lrg~~~v~aVk~~~ 278 (546)
T 3rtk_A 223 SK-------------VSTVKDLL-----------PLLEKVIGAGKPLLIIAEDVEGEALSTLVVNKIRGTFKSVAVKAPG 278 (546)
T ss_dssp SE-------------ECCSTTTH-----------HHHHHHHTTTCCEEEEESEECHHHHHHHHHHHHHSSCCEEEEECSS
T ss_pred Cc-------------cCCHHHHH-----------HHHHHHHhcCCCEEEEcCCCCHHHHHHHHHhCCCCceEEEEecccc
Confidence 86 44555543 46789999999999999999999999999764 3454
Q ss_pred -ecCChhHHHHHHHHhCCeecc-----CCCCCCCCCcCCccceEEEEEECCeEEEEEEecCCC-----------------
Q 008712 313 -RRLRKTDNNRIAKACGAVIVN-----RPDELQESDVGTGAGLFEVKKIGDEFFAFIVDCKDP----------------- 369 (557)
Q Consensus 313 -~~v~~~~l~~i~~~tG~~ii~-----~~~~l~~~~lG~~~~~v~~~~ig~~~~~~l~~~~~~----------------- 369 (557)
++.++.+|+||+++||+++++ +++++++++||+ |+.|+ ++++++++|++|.++
T Consensus 279 ~~~~rk~~le~ia~~tG~~ii~~~~~~~l~~~~~~~LG~-a~~v~---i~~d~~~~i~g~~~~~~i~~r~~~i~~~~~~~ 354 (546)
T 3rtk_A 279 FGDRRKAMLQDMAILTGGQVISEEVGLTLENADLSLLGK-ARKVV---VTKDETTIVEGAGDTDAIAGRVAQIRQEIENS 354 (546)
T ss_dssp CHHHHHHHHHHHHHHHTCCCBCSSSSCCSTTCCTTTSEE-EEEEE---ECSSCEEEEEECSCHHHHHHHHHHHHHHHHTC
T ss_pred ccccchhhHHHHHHHhCCEEeeccccCccccCCHhhCCe-eEEEE---EcCCeEEEEcCCCCHHHHHHHHHHHHHHHhhc
Confidence 455689999999999999999 689999999999 99997 478999999999763
Q ss_pred ------------------CeEEEEEccCCHHHHHHHHHHHHHHHHHHHHHHhCCCcccCCCchHHHHHHHHHhhhccCCC
Q 008712 370 ------------------KACTVLLRGASKDLLNEVERNLQDAMSVARNIIKNPKLVPGGGATELTVSATLKQKSSSIEG 431 (557)
Q Consensus 370 ------------------~~~TIll~G~t~~~l~e~~~~l~dal~~~~~~~~~g~vvpGGG~~E~~l~~~L~~~~~~~~~ 431 (557)
++|||+|||+|+.+++|+||+++|||+++|+++++| +|||||++|++|+.+|++++ .++
T Consensus 355 ~s~~~~ekl~erlakl~g~~atI~vrG~te~~l~E~er~l~DAl~a~r~av~~g-iVpGGGa~e~~~s~~L~~~~--~~g 431 (546)
T 3rtk_A 355 DSDYDREKLQERLAKLAGGVAVIKAGAATEVELKERKHRIEDAVRNAKAAVEEG-IVAGGGVTLLQAAPTLDELK--LEG 431 (546)
T ss_dssp SCHHHHHHHHHHHHHHHHCEEEEECCCCSSTHHHHHHHHHHHHHHHHHHHHHHC-EEETTTHHHHTTGGGSTTSC--CCT
T ss_pred cchhhHHHHHHHHHHhcCCeEEEEeCCCCHHHHHHHHHHHHHHHHHHHHHHhCC-cccCCcHHHHHHHHHHHHhc--ccc
Confidence 489999999999999999999999999999999999 99999999999999999876 788
Q ss_pred ccchHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHhCCCCceeeEeCCCCccccccccccccchHHHHHHHHHHHH
Q 008712 432 IEKWPYEAAAIAFEAIPRTLAQNCGINVIRTMTALQGKHANGENAWIGIDGNTGAISDMKERKIWDAYNVKAQTFKTAIE 511 (557)
Q Consensus 432 ~~~~~~~~~a~aL~~ip~~L~~NaG~d~~~~~~~l~~~~~~~~~~~~Gid~~~~~i~d~~~~gI~dp~~vk~~~l~~A~e 511 (557)
++|+++++|++||+.||++|++|||+|+.+++.+|+..+ ..+|||+.+|++.||++.|||||+.||+++|+.|+|
T Consensus 432 ~eq~~i~~~a~ALe~ip~~La~NaG~d~~~vv~~l~~~~-----~~~G~d~~~g~~~Dm~~~gI~dp~~vk~~al~~A~e 506 (546)
T 3rtk_A 432 DEATGANIVKVALEAPLKQIAFNSGLEPGVVAEKVRNLP-----AGHGLNAQTGVYEDLLAAGVADPVKVTRSALQNAAS 506 (546)
T ss_dssp THHHHHHHHHHHTTHHHHHHHTTTTCCHHHHHHHHHHSC-----TTEECCSSSCCCEETTTTTCEEEHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHhhc-----CCEeEcCCCCcEeeHHHcCCEecHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999998742 348999999999999999999999999999999999
Q ss_pred HHHHHHhhhHhhcCCccCC
Q 008712 512 AACMLLRIDDIVSGIKKKQ 530 (557)
Q Consensus 512 ~a~~lL~iD~ii~~~~~~~ 530 (557)
+|++|||+|++|...|++.
T Consensus 507 ~A~~iL~id~iI~~~~~~~ 525 (546)
T 3rtk_A 507 IAGLFLTTEAVVADKPEKE 525 (546)
T ss_dssp HHHHHHHCC----------
T ss_pred HHHHHHHHHHHHhcCCCCC
Confidence 9999999999999887544
No 27
>1gml_A T-complex protein 1 subunit gamma; chaperone, chaperonin, actin, tubulin; 2.2A {Mus musculus} SCOP: c.8.5.2 PDB: 1gn1_A
Probab=100.00 E-value=2.4e-36 Score=279.83 Aligned_cols=174 Identities=71% Similarity=1.154 Sum_probs=151.5
Q ss_pred CCCcEEEEeEEEeccccCCCCCccccCCceEEEEecCCccccccccceEEecCHHHHHHHHHHHHHHHHHHHHHHHhcCC
Q 008712 208 LEDSRVLKGVMFNKDVVAPGKMRRKIVNPRIILLDSPLEYKKGENQTNAELVKEEDWEVLLKMEEEYIENLCMQILKFKP 287 (557)
Q Consensus 208 ~~ds~li~Giv~~~~~~~~~~~~~~~~n~kIll~~~~Le~~k~~~~~~~~i~~~~~l~~~~~~E~~~i~~~l~~i~~~~~ 287 (557)
++||++++|++|++++.++ +||++++||||++++++|++++++.++++.++++++++.+++.|++++++++++|++.|+
T Consensus 1 ~~dS~lv~Gvvl~k~~~~~-~mpk~i~nakI~ll~~~Le~~k~e~~~~v~i~~~~~~~~~~~~E~~~l~~~v~kI~~~g~ 79 (178)
T 1gml_A 1 MEDSCVLRGVMINKDVTHP-RMRRYIKNPRIVLLDSSLEYKKGESQTDIEITREEDFTRILQMEEEYIHQLCEDIIQLKP 79 (178)
T ss_dssp --CCSEEEEEEESCCCSST-TSCCEEESCCEEEESSCBSCC--------------CHHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred CCCcEEEEEEEEeccccCC-CCCcccccceEEEEecccCCccccCccEEEECCHHHHHHHHHHHHHHHHHHHHHHhhcCC
Confidence 3689999999999999998 899999999999999999999999999999999999999999999999999999999999
Q ss_pred cEEEeCCCCCHHHHHHHHHcCCeEEecCChhHHHHHHHHhCCeeccCCCCCCCCCcCCccceEEEEEECCeEEEEEEecC
Q 008712 288 DLVITEKGLSDLACHYLSKAGVSAIRRLRKTDNNRIAKACGAVIVNRPDELQESDVGTGAGLFEVKKIGDEFFAFIVDCK 367 (557)
Q Consensus 288 ~lIi~~~~i~~~al~~L~~~~I~~i~~v~~~~l~~i~~~tG~~ii~~~~~l~~~~lG~~~~~v~~~~ig~~~~~~l~~~~ 367 (557)
|||+++++|++.+++||.++||++++++++++|+|||++|||++++++++++++.+|+.|+.|++.++|+++|++|+||+
T Consensus 80 nVVl~~k~I~d~a~~~l~k~gI~~vr~v~~~dleria~atGa~iv~~~~~l~~~~LG~~~~~v~~~~ig~~~~~~~~gc~ 159 (178)
T 1gml_A 80 DVVITEKGISDLAQHYLMRANVTAIRRVRKTDNNRIARACGARIVSRPEELREDDVGTGAGLLEIKKIGDEYFTFITDCK 159 (178)
T ss_dssp SEEEESSCBCHHHHHHHHHTTCEEECCCCHHHHHHHHHHHCCCEESCGGGCCGGGSBCCEEEEEEEEETTEEEEEEEEES
T ss_pred cEEEECCcccHHHHHHHHHCCCEEEecCCHHHHHHHHHHhCCeEeCChhhCChhhhCCcccEEEEEEECCeEEEEEECCC
Confidence 99999999999999999999999999999999999999999999999999999999976999999999999999999999
Q ss_pred CCCeEEEEEccCCHH
Q 008712 368 DPKACTVLLRGASKD 382 (557)
Q Consensus 368 ~~~~~TIll~G~t~~ 382 (557)
+++.|||+|||++..
T Consensus 160 ~~~~~TIllRG~~~~ 174 (178)
T 1gml_A 160 DPKACTILLRGASHH 174 (178)
T ss_dssp STTSCEEEEEC----
T ss_pred CCCEEEEEEECCCcc
Confidence 999999999999864
No 28
>1ass_A Thermosome; chaperonin, HSP60, TCP1, groel, thermoplasma ACI ATP-binding; 2.30A {Thermoplasma acidophilum} SCOP: c.8.5.2 PDB: 1asx_A
Probab=99.97 E-value=5.8e-32 Score=245.34 Aligned_cols=154 Identities=35% Similarity=0.590 Sum_probs=149.1
Q ss_pred EEeEEEeccccCCCCCccccCCceEEEEecCCccccccccceEEecCHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEeC
Q 008712 214 LKGVMFNKDVVAPGKMRRKIVNPRIILLDSPLEYKKGENQTNAELVKEEDWEVLLKMEEEYIENLCMQILKFKPDLVITE 293 (557)
Q Consensus 214 i~Giv~~~~~~~~~~~~~~~~n~kIll~~~~Le~~k~~~~~~~~i~~~~~l~~~~~~E~~~i~~~l~~i~~~~~~lIi~~ 293 (557)
++|++|++++.++ +||++++||||++++++|++++++.++++.++++++++.+++.|++++++++++|++.|+|||+++
T Consensus 1 i~Gvv~~k~~~~~-~mpk~i~nakI~ll~~~Le~~k~e~~~~v~i~~~~~~~~~~~~E~~~l~~~v~kI~~~g~nVVl~~ 79 (159)
T 1ass_A 1 MSGIVIDKEKVHS-KMPDVVKNAKIALIDSALEIKKTEIEAKVQISDPSKIQDFLNQETNTFKQMVEKIKKSGANVVLCQ 79 (159)
T ss_dssp CCCEEESCCCSCT-TSCSEEEEEEEEEESSCBSCCHHHHHHHHHTSCGGGHHHHHHHHHHHHHHHHHHHHHTTCSEEEES
T ss_pred CceEEEecccCCC-CCCcCcCCccEEEEecCcCCcccccceeEEECCHHHHHHHHHHHHHHHHHHhhhhhhCCCeEEEEC
Confidence 4799999999998 899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHcCCeEEecCChhHHHHHHHHhCCeeccCCCCCCCCCcCCccceEEEEEECCeEEEEEEecCCC
Q 008712 294 KGLSDLACHYLSKAGVSAIRRLRKTDNNRIAKACGAVIVNRPDELQESDVGTGAGLFEVKKIGDEFFAFIVDCKDP 369 (557)
Q Consensus 294 ~~i~~~al~~L~~~~I~~i~~v~~~~l~~i~~~tG~~ii~~~~~l~~~~lG~~~~~v~~~~ig~~~~~~l~~~~~~ 369 (557)
++|++.+++||.++||++++++++++|+|||++|||++++++++++++.||+ |+.|++.++|+++|++|+||++.
T Consensus 80 k~I~d~a~~~l~k~gI~~v~~v~~~dleria~atGa~iv~~~~~l~~~~LG~-~~~v~e~~ig~~~~~~~~g~~~~ 154 (159)
T 1ass_A 80 KGIDDVAQHYLAKEGIYAVRRVKKSDMEKLAKATGAKIVTDLDDLTPSVLGE-AETVEERKIGDDRMTFVMGCKNH 154 (159)
T ss_dssp SCBCHHHHHHHHHTTCEEECSCCHHHHHHHHHHHTCCCBSSTTSCCTTSCEE-EEEEEEEEETTEEEEEEESCC--
T ss_pred CccCHHHHHHHHHCCCEEEccCCHHHHHHHHHHhCCeeeCccccCCcccCcc-ceEEEEEEECCeEEEEEECCCCc
Confidence 9999999999999999999999999999999999999999999999999999 99999999999999999999754
No 29
>3m6c_A 60 kDa chaperonin 1; chaperone, ATP-binding, nucleotide-binding; 2.20A {Mycobacterium tuberculosis}
Probab=99.32 E-value=3.1e-12 Score=115.77 Aligned_cols=146 Identities=18% Similarity=0.214 Sum_probs=112.9
Q ss_pred cEEEEeEEEeccccCC------CCCccccCCceEEEEecCCccccccccceEEecCHHHHHHHHHHHHHHHHHHHHHHHh
Q 008712 211 SRVLKGVMFNKDVVAP------GKMRRKIVNPRIILLDSPLEYKKGENQTNAELVKEEDWEVLLKMEEEYIENLCMQILK 284 (557)
Q Consensus 211 s~li~Giv~~~~~~~~------~~~~~~~~n~kIll~~~~Le~~k~~~~~~~~i~~~~~l~~~~~~E~~~i~~~l~~i~~ 284 (557)
.++++|+.|+++|.+| ++|...++||+||+++.+ |++.+++.+ +++.+.+
T Consensus 2 levvEGmqfDrGYiSpyfvtd~~~m~~~le~p~ILitdkK-------------Is~i~~ilP-----------~LE~~~~ 57 (194)
T 3m6c_A 2 LEFTEGIGFDKGFLSAYFVTDFDNQQAVLEDALILLHQDK-------------ISSLPDLLP-----------LLEKVAG 57 (194)
T ss_dssp CCCCSSEEESCCBSCGGGCSBTTTTBEEEEEEEEEEBSSE-------------ECCHHHHHH-----------HHHHHHH
T ss_pred eEEEeeeEccCcccCceeeeccCCcEEEEecceEEEEcCc-------------cCCHHHHHH-----------HHHHHHH
Confidence 4678999999998875 477889999999999988 566677665 6688888
Q ss_pred cCCcEEEeCCCCCHHHHHHHHHcC------CeEE-----ecCChhHHHHHHHHhCCeecc-----CCCCCCCCCcCCccc
Q 008712 285 FKPDLVITEKGLSDLACHYLSKAG------VSAI-----RRLRKTDNNRIAKACGAVIVN-----RPDELQESDVGTGAG 348 (557)
Q Consensus 285 ~~~~lIi~~~~i~~~al~~L~~~~------I~~i-----~~v~~~~l~~i~~~tG~~ii~-----~~~~l~~~~lG~~~~ 348 (557)
.+.+|+|++.+|+.+++..|.-|+ +.++ +..++..|++||.+||+++++ ++++.+.++||+ |+
T Consensus 58 ~~kpLlIIAedvegeaLatLvvNklrg~l~v~AVKAPgfGd~Rk~~L~DiAilTGg~visee~g~~Le~~~~~~LG~-a~ 136 (194)
T 3m6c_A 58 TGKPLLIVAEDVEGEALATLVVNAIRKTLKAVAVKGPYFGDRRKAFLEDLAVVTGGQVVNPDAGMVLREVGLEVLGS-AR 136 (194)
T ss_dssp HTCCEEEEESEECHHHHHHHHHHHHHTSSCEEEEECSSCHHHHHHHHHHHHHHHTCCCBCGGGTCCGGGCCGGGCEE-EE
T ss_pred hCCCeEEEecccccchhhhhhhhhccceEEEEEEECCCCchhhhhhhHhHHHhcCCeEEeccCCcccccCCHHHCCC-cc
Confidence 899999999999999999998763 3444 456688999999999999997 567788889998 88
Q ss_pred eEEEEEECCeEEEEEEecCCCCeEEEEE-ccCCHHHHHHHHHHHHHHHHH
Q 008712 349 LFEVKKIGDEFFAFIVDCKDPKACTVLL-RGASKDLLNEVERNLQDAMSV 397 (557)
Q Consensus 349 ~v~~~~ig~~~~~~l~~~~~~~~~TIll-~G~t~~~l~e~~~~l~dal~~ 397 (557)
++.+.+ --|.++ ++.+...++.+...++.-+..
T Consensus 137 ~v~vtk----------------d~T~iv~G~g~~~~I~~Rv~qIr~~ie~ 170 (194)
T 3m6c_A 137 RVVVSK----------------DDTVIVDGGGTAEAVANRAKHLRAEIDK 170 (194)
T ss_dssp EEEECS----------------SCEEEEEECCCHHHHHHHHHHHHHHHHT
T ss_pred EEEEcC----------------CceEEecCCCCHHHHHHHHHHHHHHHHh
Confidence 776542 224444 445666667666666655543
No 30
>3osx_A 60 kDa chaperonin; alpha, beta, apical domain, chaperone; 1.55A {Xenorhabdus nematophila} SCOP: c.8.5.1 PDB: 1kid_A 1fy9_A 1la1_A 1fya_A 1jon_A 1dk7_A 1dkd_A
Probab=99.25 E-value=1.9e-11 Score=110.90 Aligned_cols=142 Identities=17% Similarity=0.248 Sum_probs=109.1
Q ss_pred EeEEEeccccCC------CCCccccCCceEEEEecCCccccccccceEEecCHHHHHHHHHHHHHHHHHHHHHHHhcCCc
Q 008712 215 KGVMFNKDVVAP------GKMRRKIVNPRIILLDSPLEYKKGENQTNAELVKEEDWEVLLKMEEEYIENLCMQILKFKPD 288 (557)
Q Consensus 215 ~Giv~~~~~~~~------~~~~~~~~n~kIll~~~~Le~~k~~~~~~~~i~~~~~l~~~~~~E~~~i~~~l~~i~~~~~~ 288 (557)
+|+.|+++|.+| +.|...++||+||+++.+ |++.+++.+ +++.+.+.+.+
T Consensus 13 ~~~qfDrGYiSPYfvtd~e~m~~~le~p~ILitdkK-------------Is~i~~ilP-----------~LE~v~~~~rp 68 (201)
T 3osx_A 13 EGMQFDRGYLSPYFINKPESGSVELENPYILLVDKK-------------ISNIRELLP-----------VLEGVAKASKP 68 (201)
T ss_dssp CCEEESCCBSCGGGCSBTTTTBEEEESCEEEEEEEE-------------ECCHHHHHH-----------HHHHHHTSSCC
T ss_pred cccEecCccCChheeecccCCEEEecCCeEEEEcCc-------------cCCHHHHHH-----------HHHHHHHhCCC
Confidence 488898888775 477889999999999988 566677665 66888999999
Q ss_pred EEEeCCCCCHHHHHHHHHcC------CeEE-----ecCChhHHHHHHHHhCCeecc-----CCCCCCCCCcCCccceEEE
Q 008712 289 LVITEKGLSDLACHYLSKAG------VSAI-----RRLRKTDNNRIAKACGAVIVN-----RPDELQESDVGTGAGLFEV 352 (557)
Q Consensus 289 lIi~~~~i~~~al~~L~~~~------I~~i-----~~v~~~~l~~i~~~tG~~ii~-----~~~~l~~~~lG~~~~~v~~ 352 (557)
|+|++.+|+.++|..|.-|+ +.++ +..++..|++||.+||+++++ ++++.+.++||+ |+++.+
T Consensus 69 LlIIAEDvegEALatLvvNklrg~l~v~AVKAPgFGdrRk~~L~DIAilTGg~visee~g~~Le~~~~~~LG~-a~~V~v 147 (201)
T 3osx_A 69 LVIIAEDVEGEALATLVVNNMRGIVKVASVKAPGFGDRRKAMLQDIATLTNGTVISEEIGLELEKATLEDLGQ-AKRVVI 147 (201)
T ss_dssp EEEEEEEECHHHHHHHHHHHHHTSCCEEEEECSSCHHHHHHHHHHHHHHHTCCCBCGGGTCCGGGCCGGGCEE-EEEEEE
T ss_pred eEEEeccccchhhhHHHHhhccceEEEEEEeCCCCccchhhhhHhHHHHhCCEEEecccCCccccCCHhhCCC-ccEEEE
Confidence 99999999999999998763 3444 455688899999999999997 467778889998 887765
Q ss_pred EEECCeEEEEEEecCCCCeEEEEE-ccCCHHHHHHHHHHHHHHHHH
Q 008712 353 KKIGDEFFAFIVDCKDPKACTVLL-RGASKDLLNEVERNLQDAMSV 397 (557)
Q Consensus 353 ~~ig~~~~~~l~~~~~~~~~TIll-~G~t~~~l~e~~~~l~dal~~ 397 (557)
.+ --|+++ ++.+...++.+...+..-+..
T Consensus 148 tk----------------d~TtIv~G~G~~~~I~~Rv~qIr~qie~ 177 (201)
T 3osx_A 148 NK----------------DTTTIIDGVGEEGAIAARVTQIRQQIEE 177 (201)
T ss_dssp CS----------------SCEEEEEECCCHHHHHHHHHHHHHHHHT
T ss_pred cC----------------CceEEecCCCCHHHHHHHHHHHHHHHHh
Confidence 42 224445 445666767766666655543
No 31
>1srv_A Protein (groel (HSP60 class)); chaperone, cell division, ATP-binding, phosphorylation; 1.70A {Thermus thermophilus} SCOP: c.8.5.1
Probab=99.23 E-value=1.1e-11 Score=106.90 Aligned_cols=113 Identities=19% Similarity=0.263 Sum_probs=92.9
Q ss_pred eEEEeccccCC------CCCccccCCceEEEEecCCccccccccceEEecCHHHHHHHHHHHHHHHHHHHHHHHhcCCcE
Q 008712 216 GVMFNKDVVAP------GKMRRKIVNPRIILLDSPLEYKKGENQTNAELVKEEDWEVLLKMEEEYIENLCMQILKFKPDL 289 (557)
Q Consensus 216 Giv~~~~~~~~------~~~~~~~~n~kIll~~~~Le~~k~~~~~~~~i~~~~~l~~~~~~E~~~i~~~l~~i~~~~~~l 289 (557)
|+.|+++|.+| ++|...++||+||+++.+ |++.+++.+ +++.+.+.+.++
T Consensus 1 GmqfDrGYlSpYfvtd~e~m~~~le~p~ILitdkK-------------Is~i~~llP-----------~LE~v~~~~~pL 56 (145)
T 1srv_A 1 GYQFDKGYISPYFVTNPETMEAVLEDAFILIVEKK-------------VSNVRELLP-----------ILEQVAQTGKPL 56 (145)
T ss_dssp CEEESCCBSCGGGCSBTTTTBEEEEEEEEEEESSE-------------ECCHHHHHH-----------HHHHHHTTTCCE
T ss_pred CccccCCccCceeecCccccEEEeeccEEEEeccc-------------ccCHHHHHH-----------HHHHHHHHCCCE
Confidence 78888888774 578889999999999988 566777666 668889999999
Q ss_pred EEeCCCCCHHHHHHHHHcC------CeEE-----ecCChhHHHHHHHHhCCeecc-----CCCCCCCCCcCCccceEEEE
Q 008712 290 VITEKGLSDLACHYLSKAG------VSAI-----RRLRKTDNNRIAKACGAVIVN-----RPDELQESDVGTGAGLFEVK 353 (557)
Q Consensus 290 Ii~~~~i~~~al~~L~~~~------I~~i-----~~v~~~~l~~i~~~tG~~ii~-----~~~~l~~~~lG~~~~~v~~~ 353 (557)
+|.+++|+.+++..|.-|+ +.++ +..++..|++||.+||+++++ ++++.+.++||+ |+++.+.
T Consensus 57 lIIAedvegeaLatLvvNklrg~l~v~AVKAPgfGd~Rk~~L~DiAilTGg~visee~g~~Le~~~~~~LG~-a~~v~vt 135 (145)
T 1srv_A 57 LIIAEDVEGEALATLVVNKLRGTLSVAAVKAPGFGDRRKEMLKDIAAVTGGTVISEELGFKLENATLSMLGR-AERVRIT 135 (145)
T ss_dssp EEEESEECHHHHHHHHHHHHTTSCCEEEEECCSSHHHHHHHHHHHHHHHTCCEECTTTTCCGGGCCGGGCEE-EEEEEEC
T ss_pred EEEecccchhhhhhhhhhhhcccceEEEEeCCCcchhhHHHHHHHHHHhCCEEEccccCCccccCCHhHCCc-cCEEEEc
Confidence 9999999999999998763 3444 466789999999999999997 456667778998 8877654
No 32
>1o13_A Probable NIFB protein; ribonuclease H-like motif fold, structural genomics, joint C structural genomics, JCSG, protein structure initiative; 1.83A {Thermotoga maritima} SCOP: c.55.5.1 PDB: 1t3v_A
Probab=54.49 E-value=31 Score=29.10 Aligned_cols=52 Identities=17% Similarity=0.169 Sum_probs=39.0
Q ss_pred HHHHHHhcCCcEEEeCCCCCHHHHHHHHHcCCeEEecCChhHHHHHHHHhCCe
Q 008712 278 LCMQILKFKPDLVITEKGLSDLACHYLSKAGVSAIRRLRKTDNNRIAKACGAV 330 (557)
Q Consensus 278 ~l~~i~~~~~~lIi~~~~i~~~al~~L~~~~I~~i~~v~~~~l~~i~~~tG~~ 330 (557)
+.+.|.+.++++||+. ++.+.+...|.++||-++......--+.|.....+.
T Consensus 68 ~a~~L~~~gv~vVI~g-~IG~~a~~~L~~~GI~v~~~~~g~i~eal~~~~~G~ 119 (136)
T 1o13_A 68 VPNFVKEKGAELVIVR-GIGRRAIAAFEAMGVKVIKGASGTVEEVVNQYLSGQ 119 (136)
T ss_dssp HHHHHHHTTCSEEECS-CCCHHHHHHHHHTTCEEECSCCSBHHHHHHHHHTTC
T ss_pred HHHHHHHCCCCEEEEC-CCCHHHHHHHHHCCCEEEecCCCCHHHHHHHHHhCC
Confidence 4456777899999987 799999999999999999866544334455555443
No 33
>2yx6_A Hypothetical protein PH0822; structural genomics, unknown function, NPPSFA, national PROJ protein structural and functional analyses; HET: ADP; 2.00A {Pyrococcus horikoshii}
Probab=53.15 E-value=35 Score=27.96 Aligned_cols=52 Identities=21% Similarity=0.262 Sum_probs=39.0
Q ss_pred HHHHHHhcCCcEEEeCCCCCHHHHHHHHHcCCeEEecCChhHHHHHHHHhCCe
Q 008712 278 LCMQILKFKPDLVITEKGLSDLACHYLSKAGVSAIRRLRKTDNNRIAKACGAV 330 (557)
Q Consensus 278 ~l~~i~~~~~~lIi~~~~i~~~al~~L~~~~I~~i~~v~~~~l~~i~~~tG~~ 330 (557)
..+.|...++++||+. ++.+.+...|.++||-++......--+.|.....+.
T Consensus 55 ~~~~L~~~gv~~vi~~-~iG~~a~~~L~~~GI~v~~~~~~~v~eal~~~~~g~ 106 (121)
T 2yx6_A 55 LPNFIKDHGAKIVLTY-GIGRRAIEYFNSLGISVVTGVYGRISDVIKAFIGGK 106 (121)
T ss_dssp HHHHHHHTTCCEEECS-BCCHHHHHHHHHTTCEEECSBCSBHHHHHHHHHTTC
T ss_pred HHHHHHHcCCCEEEEC-CCCHhHHHHHHHCCCEEEECCCCCHHHHHHHHHcCC
Confidence 4566677899999997 699999999999999999865543334455555443
No 34
>1eo1_A Hypothetical protein MTH1175; mixed A/B protein, mixed beta sheet, strand order 321456; NMR {Methanothermobacterthermautotrophicus} SCOP: c.55.5.1
Probab=50.29 E-value=40 Score=27.74 Aligned_cols=52 Identities=13% Similarity=0.053 Sum_probs=38.6
Q ss_pred HHHHHHhcCCcEEEeCCCCCHHHHHHHHHcCCeEEecCChhHHHHHHHHhCCe
Q 008712 278 LCMQILKFKPDLVITEKGLSDLACHYLSKAGVSAIRRLRKTDNNRIAKACGAV 330 (557)
Q Consensus 278 ~l~~i~~~~~~lIi~~~~i~~~al~~L~~~~I~~i~~v~~~~l~~i~~~tG~~ 330 (557)
..+.|.+.++++||+. ++.+.+...|..+||-++......--+.|.....+.
T Consensus 57 ~~~~l~~~gv~~vi~~-~iG~~a~~~L~~~GI~v~~~~~~~i~eal~~~~~g~ 108 (124)
T 1eo1_A 57 TAQIIANNGVKAVIAS-SPGPNAFEVLNELGIKIYRATGTSVEENLKLFTEGN 108 (124)
T ss_dssp HHHHHHHTTCCEEEEC-CSSHHHHHHHHHHTCEEEECCSCCHHHHHHHHHTTC
T ss_pred HHHHHHHCCCCEEEEC-CcCHHHHHHHHHCCCEEEEcCCCCHHHHHHHHHhCC
Confidence 3455678899999997 599999999999999999865543334455555443
No 35
>2wfb_A Putative uncharacterized protein ORP; mixed molybdenum-copper sulphide cluster, alpha and beta protein, biosynthetic protein; 2.00A {Desulfovibrio gigas}
Probab=47.30 E-value=39 Score=27.60 Aligned_cols=51 Identities=16% Similarity=0.137 Sum_probs=37.9
Q ss_pred HHHHHHhcCCcEEEeCCCCCHHHHHHHHHcCCeEEecCCh-hHHHHHHHHhCC
Q 008712 278 LCMQILKFKPDLVITEKGLSDLACHYLSKAGVSAIRRLRK-TDNNRIAKACGA 329 (557)
Q Consensus 278 ~l~~i~~~~~~lIi~~~~i~~~al~~L~~~~I~~i~~v~~-~~l~~i~~~tG~ 329 (557)
..+.|...++++|+|. ++.+.+...|.++||-++..... .--+.|.....+
T Consensus 59 ~~~~l~~~gv~~vi~~-~iG~~a~~~L~~~GI~v~~~~~g~~i~eal~~~~~g 110 (120)
T 2wfb_A 59 AAQVLAKSGAGVLLTG-YVGPKAFQALQAAGIKVGQDLEGLTVRQAVQRFLDG 110 (120)
T ss_dssp HHHHHHHHTEEEEECS-CCCHHHHHHHHHTTCEEECCCTTSBHHHHHHHHHTT
T ss_pred HHHHHHHCCCCEEEEC-CCCHhHHHHHHHCCCEEEEcCCCCcHHHHHHHHHcC
Confidence 4456667899999997 69999999999999999986554 333445444444
No 36
>2re2_A Uncharacterized protein TA1041; dinitrogenase iron-molybdenum cofactor, structural genomics, center for structural genomics; HET: MSE; 1.30A {Thermoplasma acidophilum dsm 1728}
Probab=38.15 E-value=68 Score=26.94 Aligned_cols=51 Identities=2% Similarity=0.036 Sum_probs=37.2
Q ss_pred HHHHHHhcCCcEEEeCCCCCHHHHHHHHHcCCeEEecCChhHHHHHHHHhCCe
Q 008712 278 LCMQILKFKPDLVITEKGLSDLACHYLSKAGVSAIRRLRKTDNNRIAKACGAV 330 (557)
Q Consensus 278 ~l~~i~~~~~~lIi~~~~i~~~al~~L~~~~I~~i~~v~~~~l~~i~~~tG~~ 330 (557)
..+.|.+.++++||+. ++.+.+...|.. ||-++......--+.+.....+.
T Consensus 71 ~~~~L~~~gv~~VI~g-~iG~~a~~~L~~-GI~v~~~~~~~veeal~~~~~G~ 121 (136)
T 2re2_A 71 MLKSALDHGANALVLS-EIGSPGFNFIKN-KMDVYIVPEMPVADALKLILEGK 121 (136)
T ss_dssp HHHHHHHTTCSEEEES-CCBHHHHHHHTT-TSEEEECCSCBHHHHHHHHHTTC
T ss_pred HHHHHHHcCCCEEEEC-CCCHhHHHHHHC-CCEEEEcCCCCHHHHHHHHHhCC
Confidence 4456677899999996 799999999999 99999875533333444444443
No 37
>1rdu_A Conserved hypothetical protein; atnos, candid, structural genomics, joint center for structu genomics, JCSG, protein structure initiative; NMR {Thermotoga maritima} SCOP: c.55.5.1
Probab=35.16 E-value=41 Score=27.25 Aligned_cols=51 Identities=18% Similarity=0.120 Sum_probs=37.9
Q ss_pred HHHHHhcCCcEEEeCCCCCHHHHHHHHHcCCeEEecCChhHHHHHHHHhCCe
Q 008712 279 CMQILKFKPDLVITEKGLSDLACHYLSKAGVSAIRRLRKTDNNRIAKACGAV 330 (557)
Q Consensus 279 l~~i~~~~~~lIi~~~~i~~~al~~L~~~~I~~i~~v~~~~l~~i~~~tG~~ 330 (557)
.+.|...++++|++. ++.+.+...|.++||-++......--+.|.....+.
T Consensus 55 ~~~l~~~gv~~vi~~-~iG~~a~~~L~~~GI~v~~~~~~~i~eal~~~~~g~ 105 (116)
T 1rdu_A 55 VQSLVSKGVEYLIAS-NVGRNAFETLKAAGVKVYRFEGGTVQEAIDAFSEGR 105 (116)
T ss_dssp HHHHHTTTCCEEECS-SCCSSCHHHHHTTTCEEECCCSCBHHHHHHHHHTTC
T ss_pred HHHHHHcCCCEEEEC-CCCHhHHHHHHHCCCEEEECCCCCHHHHHHHHHhCC
Confidence 355667899999997 589999999999999999865544334455555443
No 38
>2qtd_A Uncharacterized protein MJ0327; ribonuclease H-like motif fold, iron-molybdenum cofactor, ST genomics; HET: MSE PG4; 1.70A {Methanocaldococcus jannaschii dsm 2661ORGANISM_TAXID} PDB: 2kla_A
Probab=26.87 E-value=1.5e+02 Score=23.22 Aligned_cols=48 Identities=15% Similarity=0.140 Sum_probs=35.3
Q ss_pred HHHHhcCCcEEEeCCCCCHHHHHHHHHcCCeEEecCChhHHHHHHHHhCC
Q 008712 280 MQILKFKPDLVITEKGLSDLACHYLSKAGVSAIRRLRKTDNNRIAKACGA 329 (557)
Q Consensus 280 ~~i~~~~~~lIi~~~~i~~~al~~L~~~~I~~i~~v~~~~l~~i~~~tG~ 329 (557)
+.+...++++|++. ++.+.+...|.++ |-++......--+.|.....+
T Consensus 50 ~~l~~~gv~~vi~~-~iG~~a~~~L~~~-I~v~~~~~~~v~eal~~~~~g 97 (105)
T 2qtd_A 50 KSIVKENVNAIICK-NISEENYKKFSKK-IEIYHAEGDDVDKNISLFIEG 97 (105)
T ss_dssp HHHHHTCCSEEEES-CCCHHHHHHHHTT-CEEEECCSSCHHHHHHHHHTT
T ss_pred HHHHHCCCCEEEEC-CCCHHHHHHHHhc-cEEEECCCCCHHHHHHHHHcC
Confidence 44556899999996 7999999999999 999886554333445544444
No 39
>2lbw_A H/ACA ribonucleoprotein complex subunit 2; L7AE, snoRNP, scaRNP, RNA binding protein; NMR {Saccharomyces cerevisiae} PDB: 2lbx_A
Probab=25.57 E-value=1.7e+02 Score=23.89 Aligned_cols=50 Identities=16% Similarity=0.066 Sum_probs=35.7
Q ss_pred HHHHHHHhcCCcEEEeCCCCCHH-----HHHHHHHcCCeEEecCChhHHHHHHHHhCC
Q 008712 277 NLCMQILKFKPDLVITEKGLSDL-----ACHYLSKAGVSAIRRLRKTDNNRIAKACGA 329 (557)
Q Consensus 277 ~~l~~i~~~~~~lIi~~~~i~~~-----al~~L~~~~I~~i~~v~~~~l~~i~~~tG~ 329 (557)
+.++.|.+-.+.+|+.+.++++. +..+|..++|..+..-++.+ |..++|.
T Consensus 27 ~v~kai~~gkakLViiA~D~~~~~~~~~l~~lc~~~~VP~~~v~sk~e---LG~a~g~ 81 (121)
T 2lbw_A 27 EVVKALRKGEKGLVVIAGDIWPADVISHIPVLCEDHSVPYIFIPSKQD---LGAAGAT 81 (121)
T ss_dssp HHHHHHHHSCCCEEEECTTCSCTTHHHHHHHHHHHTCCCEEECCCHHH---HHHHHTC
T ss_pred HHHHHHHcCCceEEEEeCCCCHHHHHHHHHHHHHhcCCcEEEECCHHH---HHHHhCC
Confidence 45566667788999999999884 44567788998876656655 4556663
No 40
>2xzm_U Ribosomal protein L7AE containing protein; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_U
Probab=25.53 E-value=1.6e+02 Score=24.31 Aligned_cols=50 Identities=10% Similarity=0.099 Sum_probs=35.4
Q ss_pred HHHHHHHhcCCcEEEeCCCCCH-----HHHHHHHHcCCeEEecCChhHHHHHHHHhCC
Q 008712 277 NLCMQILKFKPDLVITEKGLSD-----LACHYLSKAGVSAIRRLRKTDNNRIAKACGA 329 (557)
Q Consensus 277 ~~l~~i~~~~~~lIi~~~~i~~-----~al~~L~~~~I~~i~~v~~~~l~~i~~~tG~ 329 (557)
+.++.|.+-.+.+|+.+.+.++ .+..++..++|.++.--++. +|..++|-
T Consensus 31 ~v~Kai~~gka~LViiA~D~~p~~~~~~i~~lc~~~~Ip~~~v~sk~---~LG~a~G~ 85 (126)
T 2xzm_U 31 EVLRTIEAKQALFVCVAEDCDQGNYVKLVKALCAKNEIKYVSVPKRA---SLGEYLGH 85 (126)
T ss_dssp HHHHHHHHTCCSEEEEESSCCSTTHHHHHHHHHHHTTCCEEEESCSH---HHHHHHTC
T ss_pred HHHHHHHcCCceEEEEeCCCChHHHHHHHHHHHHHhCCCEEEECCHH---HHHHHHCC
Confidence 3455666677899999999975 45667888899887544444 46666664
No 41
>3v7q_A Probable ribosomal protein YLXQ; L7AE superfamily, K-turn binding, K-turn RNA, hypothetical R protein, RNA binding protein; HET: CIT; 1.55A {Bacillus subtilis}
Probab=25.33 E-value=1.8e+02 Score=22.79 Aligned_cols=51 Identities=12% Similarity=0.080 Sum_probs=36.4
Q ss_pred HHHHHHHhcCCcEEEeCCCCCHHHHH----HHHHcCCeEEecCChhHHHHHHHHhCCe
Q 008712 277 NLCMQILKFKPDLVITEKGLSDLACH----YLSKAGVSAIRRLRKTDNNRIAKACGAV 330 (557)
Q Consensus 277 ~~l~~i~~~~~~lIi~~~~i~~~al~----~L~~~~I~~i~~v~~~~l~~i~~~tG~~ 330 (557)
+..+.+.+-.+.+||.+.+.++.... ++...+|.++..-++.+ |..++|-.
T Consensus 26 ~v~kai~~gka~lViiA~D~~~~~~~~i~~~c~~~~vp~~~~~s~~e---LG~A~Gk~ 80 (101)
T 3v7q_A 26 LVIKEIRNARAKLVLLTEDASSNTAKKVTDKCNYYKVPYKKVESRAV---LGRSIGKE 80 (101)
T ss_dssp HHHHHHHTTCCSEEEEETTSCHHHHHHHHHHHHHTTCCEEEESCHHH---HHHHTTSS
T ss_pred hhHHHHhcCceeEEEEeccccccchhhhcccccccCCCeeeechHHH---HHhhhCcc
Confidence 34556666778999999999986554 45677998887766655 56666653
No 42
>3v7e_A Ribosome-associated protein L7AE-like; RNA-protein complex, K-turn, L7AE-like, A member L7AE/L30E superfamily; HET: SAM; 2.80A {Bacillus subtilis}
Probab=23.78 E-value=1.5e+02 Score=22.29 Aligned_cols=49 Identities=16% Similarity=0.198 Sum_probs=34.8
Q ss_pred HHHHHHhcCCcEEEeCCCCCHHHHH----HHHHcCCeEEecCChhHHHHHHHHhCC
Q 008712 278 LCMQILKFKPDLVITEKGLSDLACH----YLSKAGVSAIRRLRKTDNNRIAKACGA 329 (557)
Q Consensus 278 ~l~~i~~~~~~lIi~~~~i~~~al~----~L~~~~I~~i~~v~~~~l~~i~~~tG~ 329 (557)
.++.+.+-.+.+|+.+.+.++.... ++..++|.++.--++.+ |..++|-
T Consensus 19 v~kai~~gkaklViiA~D~~~~~~~~i~~lc~~~~Ip~~~v~sk~e---LG~a~Gk 71 (82)
T 3v7e_A 19 TVKALKRGSVKEVVVAKDADPILTSSVVSLAEDQGISVSMVESMKK---LGKACGI 71 (82)
T ss_dssp HHHHHTTTCEEEEEEETTSCHHHHHHHHHHHHHHTCCEEEESCHHH---HHHHHTC
T ss_pred HHHHHHcCCeeEEEEeCCCCHHHHHHHHHHHHHcCCCEEEECCHHH---HHHHhCC
Confidence 4455656678999999999987554 44667998877666654 5566664
No 43
>3psh_A Protein HI_1472; substrate binding protein, periplasmic binding protein, MOLY binding protein, metal transport; 1.50A {Haemophilus influenzae} PDB: 3psa_A
Probab=22.67 E-value=1.4e+02 Score=28.75 Aligned_cols=50 Identities=18% Similarity=0.210 Sum_probs=38.0
Q ss_pred HHHHhcCCcEEEeCCCCCHHHHHHHHHcCCeEEec--CC------------------------hhHHHHHHHHhCC
Q 008712 280 MQILKFKPDLVITEKGLSDLACHYLSKAGVSAIRR--LR------------------------KTDNNRIAKACGA 329 (557)
Q Consensus 280 ~~i~~~~~~lIi~~~~i~~~al~~L~~~~I~~i~~--v~------------------------~~~l~~i~~~tG~ 329 (557)
+.|...+++|||.....++...+.|.+.||.++-- -. .+.++.++.++|.
T Consensus 78 E~i~~l~PDlIi~~~~~~~~~~~~L~~~Gipvv~~~~~~~~~~~~~~~~pt~~~~~~~~~~~~~~~i~~lg~~lg~ 153 (326)
T 3psh_A 78 ESLLALKPDVVFVTNYAPSEMIKQISDVNIPVVAISLRTGEVGEKGKLNPTLTDEDKAYNDGLKQGIELIAEVFEK 153 (326)
T ss_dssp HHHHHTCCSEEEEETTCCHHHHHHHHTTTCCEEEECSCCSCGGGTTCSSCCCTTHHHHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHccCCCEEEEeCCCChHHHHHHHHcCCCEEEEeccccccccccccccccccccchhhhhHHHHHHHHHHHcCC
Confidence 56788899999987666777888899989876631 10 3567888888885
No 44
>3on1_A BH2414 protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG, unknown function; HET: MSE; 1.65A {Bacillus halodurans}
Probab=22.45 E-value=2e+02 Score=22.53 Aligned_cols=50 Identities=10% Similarity=0.005 Sum_probs=35.0
Q ss_pred HHHHHHHhcCCcEEEeCCCCCHHHHH----HHHHcCCeEEecCChhHHHHHHHHhCC
Q 008712 277 NLCMQILKFKPDLVITEKGLSDLACH----YLSKAGVSAIRRLRKTDNNRIAKACGA 329 (557)
Q Consensus 277 ~~l~~i~~~~~~lIi~~~~i~~~al~----~L~~~~I~~i~~v~~~~l~~i~~~tG~ 329 (557)
+..+.+.+-.+.+||.+.+.++.... ++..++|.++..-++.+ |..++|-
T Consensus 25 ~v~kai~~gka~lViiA~D~~~~~~~~i~~~c~~~~ip~~~~~s~~e---LG~a~Gk 78 (101)
T 3on1_A 25 QVVKAVQNGQVTLVILSSDAGIHTKKKLLDKCGSYQIPVKVVGNRQM---LGRAIGK 78 (101)
T ss_dssp HHHHHHHTTCCSEEEEETTSCHHHHHHHHHHHHHHTCCEEEESCHHH---HHHHTTS
T ss_pred HHHHHHHcCCCcEEEEeCCCCHHHHHHHHHHHHHcCCCEEEeCCHHH---HHHHhCC
Confidence 34556666778999999999986554 44567888877655554 5566665
No 45
>2pw9_A Putative formate dehydrogenase accessory protein; structural genomics, unknown function, PSI-2, protein structure initiative; 2.10A {Desulfotalea psychrophila LSV54} SCOP: c.97.1.5
Probab=22.05 E-value=83 Score=29.94 Aligned_cols=40 Identities=10% Similarity=0.251 Sum_probs=35.5
Q ss_pred HHHHHHhcCCcEEEeCCCCCHHHHHHHHHcCCeEEecCCh
Q 008712 278 LCMQILKFKPDLVITEKGLSDLACHYLSKAGVSAIRRLRK 317 (557)
Q Consensus 278 ~l~~i~~~~~~lIi~~~~i~~~al~~L~~~~I~~i~~v~~ 317 (557)
++++.+..|+++|++-......+.++..+.||..++.++.
T Consensus 207 mV~Kaa~aGIpvlvS~SApTslAV~lA~~~giTLiGf~R~ 246 (268)
T 2pw9_A 207 MVLKCARIGIPIIMSRTSPSSLGLALAKRSGATLVAYSRP 246 (268)
T ss_dssp HHHHHHHHTCCEEEESSCBCHHHHHHHHHHTCEEEEEEET
T ss_pred HHHHHHHcCCCEEEEcccccHHHHHHHHHcCCEEEEEecC
Confidence 7788899999999999999999999999999998887654
Done!